RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780754|ref|YP_003065167.1| inorganic polyphosphate/ATP-NAD kinase [Candidatus Liberibacter asiaticus str. psy62] (264 letters) >gnl|CDD|179876 PRK04761, ppnK, inorganic polyphosphate/ATP-NAD kinase; Reviewed. Length = 246 Score = 353 bits (908), Expect = 3e-98 Identities = 130/252 (51%), Positives = 164/252 (65%), Gaps = 7/252 (2%) Query: 12 ASNAKKAQEAYDKFVKIYGNSTSEEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSV 71 AS +AQ A ++ VK YG+ EEADVIV LGGDGFMLQ+ H+ KP+YGMN GSV Sbjct: 1 ASPTPEAQAALEELVKRYGDVPIEEADVIVALGGDGFMLQTLHRYMNSGKPVYGMNRGSV 60 Query: 72 GFLMNEYCIENLVERLSVAVECTFHPLKMTVFDYDNSICAENILAINEVSIIRKPGQNQL 131 GFLMNEY ++L+ER++ A HPL+MT D + LAINEVS+ R Q Sbjct: 61 GFLMNEYSEDDLLERIAAAEPTVLHPLRMTATDVSGEVH--EALAINEVSLFR-----QT 113 Query: 132 VQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSPFK 191 QAAKL + +D +VR+ ELVCDG++V+TP GSTAYN SA GPILPL S L LTP+SPF+ Sbjct: 114 RQAAKLRISIDGKVRMEELVCDGVLVATPAGSTAYNLSAHGPILPLGSNLLALTPISPFR 173 Query: 192 PRRWHGAILPNDVMIEIQVLEHKQRPVIATADRLAIEPVSRINVTQSSDITMRILSDSHR 251 PRRW GA+LPN + VLE +RPV A AD + V + + + DIT+ +L D Sbjct: 174 PRRWRGALLPNSATVRFDVLEPDKRPVSAVADNTEVRDVVEVTIREDKDITVTLLFDPGH 233 Query: 252 SWSDRILTAQFS 263 S +RIL QF Sbjct: 234 SLEERILAEQFG 245 >gnl|CDD|179635 PRK03708, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 277 Score = 92.5 bits (230), Expect = 1e-19 Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 20/193 (10%) Query: 36 EADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIENLVERLSVAVECTF 95 + D I+ +GGDG +L+ H++K+ D PI G+N G++GFL E E LS +E + Sbjct: 57 DVDFIIAIGGDGTILRIEHKTKK-DIPILGINMGTLGFL-TEVEPEETFFALSRLLEGDY 114 Query: 96 H---PLKMTVFDYDNSICAENI-LAINEVSII-RKPGQNQLVQAAKLEVKVDDQVRLPEL 150 +K+ V+ I EN+ A+NEV I+ PG+ L+ VD ++ E+ Sbjct: 115 FIDERIKLRVY-----INGENVPDALNEVVILTGIPGK-----IIHLKYYVDGEL-ADEV 163 Query: 151 VCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSPFKPRRWHGAILPNDVMIEIQV 210 DGL++STP GSTAY SA GP + +L+ P+ PF ++P+ I++++ Sbjct: 164 RADGLIISTPTGSTAYAMSAGGPFVDPRLDAILIAPLCPF-KLSSRPMVVPSSSRIDVKL 222 Query: 211 LEHKQRPVIATAD 223 L R +I D Sbjct: 223 LR-TGREIILVID 234 >gnl|CDD|184489 PRK14075, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 256 Score = 82.5 bits (204), Expect = 1e-16 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 43/256 (16%) Query: 8 IHFKASNAKKAQEAYDK-----FVKIYGNSTSE---EADVIVVLGGDGFMLQSFHQSKEY 59 I ++ K+A+ +K V + +++ AD+I+V+GGDG +L++ +K+ Sbjct: 5 IFYREEKEKEAKFLKEKISKEHEVVEFCEASASGKVTADLIIVVGGDGTVLKA---AKKV 61 Query: 60 DKPIYGMNCGSVGFL----MNEYCIENLVERLS----VAVECTFHPLKMTVFDYDNSICA 111 P+ G G +GFL + E I+ +E L + F ++ + ++ Sbjct: 62 GTPLVGFKAGRLGFLSSYTLEE--IDRFLEDLKNWNFREEKRWFLKIESELGNHL----- 114 Query: 112 ENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSAL 171 A+N+V++ R P Q + ++EV +D + DG+V+STP GSTAY+ S Sbjct: 115 ----ALNDVTLERDPSQKMV----EIEVSFEDHSSM-WFFADGVVISTPTGSTAYSLSLG 165 Query: 172 GPILPLESRHLLLTPVSP-FKPRRWHGAILPNDVMIEIQVLEHKQRPVIATADRLAIEPV 230 GPI+ +TP++P F R ++P++ + ++ QR + D + + Sbjct: 166 GPIILPNCEVFEITPIAPQFLATR--SIVIPSNEKVTVES----QRDINLIVDGVLVGKT 219 Query: 231 SRINVTQSSDITMRIL 246 +RI V +S +RIL Sbjct: 220 NRITVKKSRR-YVRIL 234 >gnl|CDD|179573 PRK03372, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 306 Score = 81.1 bits (201), Expect = 3e-16 Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 48/251 (19%) Query: 34 SEEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFL-------MNE--------- 77 ++ ++++VLGGDG +L++ ++ D P+ G+N G VGFL ++E Sbjct: 70 ADGCELVLVLGGDGTILRAAELARAADVPVLGVNLGHVGFLAEAEAEDLDEAVERVVDRD 129 Query: 78 YCIENLVERLSVAVECTFHPLKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKL 137 Y +E ER+++ V TV + A+NE S+ + + L L Sbjct: 130 YRVE---ERMTLDV---------TVRVGGEIV--WRGWALNEASLEKADREGML--EVVL 173 Query: 138 EVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSP---F-KPR 193 EV D + CDG++VSTP GSTAY FSA GP++ + LL+ P++ F +P Sbjct: 174 EV---DGRPVSSFGCDGVLVSTPTGSTAYAFSAGGPVVWPDLEALLVVPLNAHALFARP- 229 Query: 194 RWHGAILPNDVMIEIQVLEHKQRPVIATADR--LAIEPVSRINVTQSSDITMRILSDSHR 251 ++ + +++L V+ R + + P +R+ V + + +R+ Sbjct: 230 ----LVVSPTSTVAVEILADTSDAVLWCDGRRSVDLPPGARVEVRRGAT-PVRLARLDSA 284 Query: 252 SWSDRILTAQF 262 ++DR L +F Sbjct: 285 PFTDR-LVRKF 294 >gnl|CDD|167337 PRK02231, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 272 Score = 79.8 bits (197), Expect = 7e-16 Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 27/223 (12%) Query: 37 ADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLM-----NEYC-IENLVERLSVA 90 A + +V+GGDG ML +YD P+ G+N G++GFL N Y +E +ER Sbjct: 43 AQLAIVIGGDGNMLGRARVLAKYDIPLIGINRGNLGFLTDIDPKNAYEQLEACLERGEFF 102 Query: 91 VECTFHPLKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRLPEL 150 VE F L+ + I N A+NEV I P + + V +DD+ + Sbjct: 103 VEERFL-LEAKIERNGKIIATSN--ALNEVVI--HPAK--IAHMIDFHVYIDDKFAFSQR 155 Query: 151 VCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSPF----KPRRWHGAILPNDVMI 206 DGL++STP GSTAY+ SA GPIL + L P+ P +P ++ D I Sbjct: 156 -SDGLIISTPTGSTAYSLSAGGPILTPNLNAIALVPMFPHTLSSRP-----LVIDGDSKI 209 Query: 207 EIQVLEHKQRPVIATADR---LAIEPVSRINVTQSSDITMRIL 246 ++ E+ + + D L P R++V +S D +R+L Sbjct: 210 SLRFAEYNTPQLEVSCDSQIALPFTPDDRVHVQKSPDK-LRLL 251 >gnl|CDD|179862 PRK04539, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 296 Score = 77.6 bits (191), Expect = 3e-15 Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 13/158 (8%) Query: 37 ADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIENLVERLSVAVECTFH 96 D++ VLGGDG L + PI G+N G +GF + + E + ++L +E + Sbjct: 69 CDLVAVLGGDGTFLSVAREIAPRAVPIIGINQGHLGF-LTQIPREYMTDKLLPVLEGKYL 127 Query: 97 P-----LKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRLPELV 151 ++ + + E LA+N+ ++ + G Q+++ EV V+ + + Sbjct: 128 AEERILIEAALIREGKTA--ERALALNDA-VLSRGGAGQMIE---FEVFVNREFVYTQR- 180 Query: 152 CDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSP 189 DGL+VSTP GSTAY+ +A GPI+ L P+ P Sbjct: 181 SDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP 218 >gnl|CDD|184490 PRK14076, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 569 Score = 76.7 bits (189), Expect = 6e-15 Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 15/158 (9%) Query: 40 IVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIENLVERLSVAVECTFHPLK 99 I+ +GGDG +L++ + PI +N G+VGFL E+ E + + + + + K Sbjct: 352 IISIGGDGTVLRASKLVNGEEIPIICINMGTVGFL-TEFSKEEIFKAIDSIISGEYEIEK 410 Query: 100 MT-VFDYDNSICAENIL--AINEVSIIRKPGQNQLVQAAKL---EVKVDDQVRLPELVCD 153 T + + +NIL A+NEV I K AK+ EV V+ ++ + E+ D Sbjct: 411 RTKLSGFILKDGHQNILPSALNEVVITTK-------NPAKMLHFEVYVNGEL-VEEVRAD 462 Query: 154 GLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSPFK 191 G+++STP GSTAY+ SA GPI+ ++ P+ PFK Sbjct: 463 GIIISTPTGSTAYSLSAGGPIVEPTVDGFIIVPICPFK 500 >gnl|CDD|179241 PRK01185, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 271 Score = 74.8 bits (184), Expect = 2e-14 Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 24/194 (12%) Query: 24 KFVKIYGNSTSE-EADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIEN 82 K + + G E ADVI+ +GGDG +L++ ++K PI G+N G +GFL E I+ Sbjct: 39 KALGMDGLDIEEINADVIITIGGDGTILRTLQRAK---GPILGINMGGLGFL-TEIEIDE 94 Query: 83 L---VERLSVAVECTFHPLKMTVF---DYDNSICAENILAINEVSIIRKPGQNQLVQAAK 136 + +++L +K+ V+ + E ++ + ++ IR+ Sbjct: 95 VGSAIKKLIRGEYFIDERMKLKVYINGERLEDCTNEAVIHTDRIAKIRQ----------- 143 Query: 137 LEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSPFKPRRWH 196 ++ D L DG++V+TP GST+Y+ SA GPIL ++++ ++P+ R Sbjct: 144 FKIYYDGHF-LDTFKADGVIVATPTGSTSYSSSAGGPILLPNLEGMVISYIAPYS-SRPK 201 Query: 197 GAILPNDVMIEIQV 210 ++P++ +EI++ Sbjct: 202 SVVVPSESTVEIKI 215 >gnl|CDD|179257 PRK01231, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 295 Score = 74.6 bits (184), Expect = 3e-14 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 21/150 (14%) Query: 35 EEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMN---EYCIENLVERLS--V 89 E D+++V+GGDG +L + ++ P+ G+N G +GFL + + L E L Sbjct: 61 EVCDLVIVVGGDGSLLGAARALARHNVPVLGINRGRLGFLTDIRPDELEFKLAEVLDGHY 120 Query: 90 AVECTFHPLKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRLPE 149 E F L+ V I + A+N+V + PG+ + + E+ +D Q Sbjct: 121 QEEERFL-LEAEVRRGGEVI-GQGD-ALNDVVL--HPGK--STRMIEFELYIDGQ----- 168 Query: 150 LVC----DGLVVSTPIGSTAYNFSALGPIL 175 VC DGL+VSTP GSTAY S GPI+ Sbjct: 169 FVCSQRSDGLIVSTPTGSTAYALSGGGPIM 198 >gnl|CDD|179379 PRK02155, ppnK, NAD(+)/NADH kinase family protein; Provisional. Length = 291 Score = 74.2 bits (183), Expect = 3e-14 Identities = 69/225 (30%), Positives = 106/225 (47%), Gaps = 32/225 (14%) Query: 36 EADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIENLVERLSVAVECTF 95 AD+ VVLGGDG ML Q Y P+ G+N G +GF + + ++++ E L + + Sbjct: 63 RADLAVVLGGDGTMLGIGRQLAPYGVPLIGINHGRLGF-ITDIPLDDMQETLPPMLAGNY 121 Query: 96 ---HPLKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRLPELVC 152 + + + + LA N+V + R G + +V+ L V VD + Sbjct: 122 EEEERMLLEARVVRDGEPIFHALAFNDVVVNRS-GFSGMVE---LRVSVDG-----RFMY 172 Query: 153 ----DGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSPF----KPRRWHGAILPNDV 204 DGL+V+TP GSTAY SA GPIL + +L P++P +P +LP+D Sbjct: 173 NQRSDGLIVATPTGSTAYALSAGGPILHPQLPGWVLVPIAPHTLSNRP-----IVLPDDS 227 Query: 205 MIEIQVLEHKQRPVIATADR---LAIEPVSRINVTQSSDITMRIL 246 + IQ+ R V D ++E RI V +S T+R L Sbjct: 228 EVAIQI--VGGRDVSVNFDMQSLTSLELGDRIEVRRSPH-TVRFL 269 >gnl|CDD|179455 PRK02645, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 305 Score = 73.8 bits (182), Expect = 4e-14 Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 22/158 (13%) Query: 32 STSEEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCG-SVGFLMNEYCI---ENLVERL 87 S SE D+ +VLGGDG +L + +D PI +N G +GFL + + E++ +RL Sbjct: 53 SASELIDLAIVLGGDGTVLAAARHLAPHDIPILSVNVGGHLGFLTHPRDLLQDESVWDRL 112 Query: 88 S---VAVECTFHPLKM----TVFDYDNSIC---AENILAINEVSIIRKPGQNQLVQAAKL 137 A+E +M VF+ D S +E+ A+N+ + KP L Sbjct: 113 QEDRYAIE-----RRMMLQARVFEGDRSNEEPVSESYYALNDFYL--KPASEDRSPTCIL 165 Query: 138 EVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPIL 175 E+++D +V + + DGL+VSTP GSTAY +A GPIL Sbjct: 166 ELEIDGEV-VDQYQGDGLIVSTPTGSTAYTMAAGGPIL 202 >gnl|CDD|179352 PRK01911, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 292 Score = 73.4 bits (181), Expect = 6e-14 Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 38/191 (19%) Query: 15 AKKAQEAYDKFVKIYGNSTSEEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFL 74 K +YD F AD+++ +GGDG L++ + PI G+N G +GFL Sbjct: 45 DLKFHPSYDTFSD--NEELDGSADMVISIGGDGTFLRTATYVGNSNIPILGINTGRLGFL 102 Query: 75 M----------------NEYCIENLVERLSVAVECTFHPLKMTVFDYDNSICAENILAIN 118 +Y IE ER + +E + + E A+N Sbjct: 103 ATVSKEEIEETIDELLNGDYTIE---ERSLLQLES------------NPKLFGELNFALN 147 Query: 119 EVSIIRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLE 178 E++I+++ + + + ++ + L DGL+V+TP GST Y+ S GPI+ + Sbjct: 148 EIAILKRDTSSMI----TVHTYLNGEY-LNSYWADGLIVATPTGSTGYSLSCGGPIIVPD 202 Query: 179 SRHLLLTPVSP 189 ++ ++TP++P Sbjct: 203 AKSFVITPIAP 213 >gnl|CDD|179574 PRK03378, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 292 Score = 71.9 bits (177), Expect = 2e-13 Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 17/162 (10%) Query: 35 EEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFL--MNEYCIENLVERLSVAVE 92 ++AD+ +V+GGDG ML + YD + G+N G++GFL ++ +N +++LS +E Sbjct: 62 QQADLAIVVGGDGNMLGAARVLARYDIKVIGINRGNLGFLTDLDP---DNALQQLSDVLE 118 Query: 93 CTFHPLKMTVFDYDNSICAENIL-----AINEVSIIRKPGQNQLVQAAKLEVKVDDQVRL 147 + + F + +C AINEV + PG+ + + EV +DD Sbjct: 119 GHY--ISEKRFLLEAQVCRHGQQKRISTAINEV--VLHPGK--VAHMIEFEVYIDDNFAF 172 Query: 148 PELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSP 189 + DGL++STP GSTAY+ SA GPIL + L P+ P Sbjct: 173 SQR-SDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFP 213 >gnl|CDD|172567 PRK14077, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 287 Score = 69.0 bits (169), Expect = 1e-12 Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 17/159 (10%) Query: 36 EADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFL----MNEYCIENLVE---RLS 88 +D ++ LGGDG ++ ++ EYDK + G++ G +GFL ++E E + + Sbjct: 64 ISDFLISLGGDGTLISLCRKAAEYDKFVLGIHAGHLGFLTDITVDEA--EKFFQAFFQGE 121 Query: 89 VAVECTFHPLKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRLP 148 +E P ++VF LA N+V I + N A +E ++++ Sbjct: 122 FEIE---KPYMLSVFLEKKQGKILEKLAFNDVVISK----NNQASMAHIEAFLNEK-YFN 173 Query: 149 ELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPV 187 E DG++V+TP GSTAYN SA GPI+ S+ +LTPV Sbjct: 174 EYFGDGVIVATPAGSTAYNMSANGPIIYPLSQVFILTPV 212 >gnl|CDD|179456 PRK02649, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 305 Score = 68.1 bits (167), Expect = 2e-12 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 9/152 (5%) Query: 41 VVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIENLVERLSVAVECTFHPLK- 99 +VLGGDG +L + Q P+ +N G +GFL Y + L E + + + + Sbjct: 73 IVLGGDGTVLSAARQLAPCGIPLLTINTGHLGFLTEAY-LNQLDEAIDQVLAGQYTIEER 131 Query: 100 --MTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVV 157 +TV L++NE+ + R+P L E+ + + ++ DG+++ Sbjct: 132 TMLTVSVMRGDQLRWEALSLNEMVLHREP----LTSMCHFEIAIGRHAPV-DIAADGVIL 186 Query: 158 STPIGSTAYNFSALGPILPLESRHLLLTPVSP 189 STP GSTAY+ SA GP++ + L LTP+ P Sbjct: 187 STPTGSTAYSLSAGGPVITPDVPVLQLTPICP 218 >gnl|CDD|178523 PLN02935, PLN02935, Bifunctional NADH kinase/NAD(+) kinase. Length = 508 Score = 62.2 bits (151), Expect = 1e-10 Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 35/191 (18%) Query: 38 DVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFL------MNEYCIENLVE-----R 86 D+++ LGGDG +L + K P+ + GS+GF+ C++ +++ Sbjct: 264 DLVITLGGDGTVLWAASMFKGPVPPVVPFSMGSLGFMTPFHSEQYRDCLDAILKGPISIT 323 Query: 87 LSVAVECTFHPLKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVR 146 L ++C H ++ + + E IL +NEV+I R LE D+ Sbjct: 324 LRHRLQC--HIIRDAAKNEYET--EEPILVLNEVTIDRGISSF----LTNLECYCDNSF- 374 Query: 147 LPELVC---DGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSP----FKPRRWHGAI 199 + C DGL++ST GSTAY+ +A G ++ + +L TP+ P F+P I Sbjct: 375 ---VTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRP-----LI 426 Query: 200 LPNDVMIEIQV 210 LP V I +QV Sbjct: 427 LPEYVTIRVQV 437 >gnl|CDD|179889 PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 265 Score = 57.1 bits (139), Expect = 4e-09 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 29/156 (18%) Query: 33 TSEEADVIVVLGGDGFMLQSFHQ-SKEYDKPIY-GMNCGSVGFLMN--EYCIENLVERLS 88 + D+++ +GGDG +L +FH+ + DK + G++ G +GF + + ++ LV L+ Sbjct: 32 DEKNPDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHTGHLGFYTDWRPFEVDKLVIALA 91 Query: 89 V----AVECTFHP-LKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDD 143 V +P L++ + D E LA+NE + I++ LV +V ++ Sbjct: 92 KDPGQVVS---YPLLEVKITYEDGEK--EKYLALNE-ATIKRIE-GTLV----ADVYING 140 Query: 144 QV----RLPELVCDGLVVSTPIGSTAYNFSALGPIL 175 + R DGL VSTP GSTAYN S G +L Sbjct: 141 VLFERFR-----GDGLCVSTPTGSTAYNKSLGGAVL 171 >gnl|CDD|179584 PRK03501, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 264 Score = 55.4 bits (134), Expect = 1e-08 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 28/155 (18%) Query: 35 EEADVIVVLGGDGFMLQSFHQSKEYDKPIY-GMN-CGSVGFLMNEYC------IENLVER 86 + A++IV +GGDG LQ+ ++ + +Y G++ +GF YC ++ +++ Sbjct: 38 KNANIIVSIGGDGTFLQAVRKTGFREDCLYAGISTKDQLGF----YCDFHIDDLDKMIQA 93 Query: 87 LSV-AVECTFHPLKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQV 145 ++ +E +P D S +NE SI ++ +++ ++V +DD Sbjct: 94 ITKEEIEVRKYPTIEVTVDGSTSF-----YCLNEFSI-----RSSIIKTFVIDVYIDDL- 142 Query: 146 RLPELVCDGLVVSTPIGSTAYNFSALG----PILP 176 DG+VVSTP GSTAYN S G P++P Sbjct: 143 HFETFRGDGMVVSTPTGSTAYNKSVRGAVVDPLIP 177 >gnl|CDD|178328 PLN02727, PLN02727, NAD kinase. Length = 986 Score = 54.5 bits (131), Expect = 3e-08 Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 37/217 (17%) Query: 20 EAYDKFVKI---------YGNSTS---EEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMN 67 + +D F +I Y TS E D + LGGDG +L + + + P+ N Sbjct: 715 DVHDIFARIPGFGFVQTFYSQDTSDLHERVDFVACLGGDGVILHASNLFRGAVPPVVSFN 774 Query: 68 CGSVGFLMNEYCIENLVERLSVAV------ECTFHPLKM----TVFDYDNSICAENILAI 117 GS+GFL + Y E+ + L + + + L+M +F ++ + + Sbjct: 775 LGSLGFLTSHY-FEDFRQDLRQVIHGNNTLDGVYITLRMRLRCEIFRNGKAMPGKVFDVL 833 Query: 118 NEVSIIRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPL 177 NEV + R G N + +K+E D++ + ++ DG++V+TP GSTAY+ +A G ++ Sbjct: 834 NEVVVDR--GSNPYL--SKIECYEHDRL-ITKVQGDGVIVATPTGSTAYSTAAGGSMVHP 888 Query: 178 ESRHLLLTPVSP----FKPRRWHGAILPNDVMIEIQV 210 +L TP+ P F+P ILP+ +E+++ Sbjct: 889 NVPCMLFTPICPHSLSFRP-----VILPDSARLELKI 920 >gnl|CDD|100598 PRK00561, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional. Length = 259 Score = 43.3 bits (102), Expect = 6e-05 Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 43/228 (18%) Query: 12 ASNAKKAQEAYDKFVKIYGNSTSEE--ADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCG 69 AS + + K K+ + E AD + VLGGDGF + + + G+N G Sbjct: 7 ASTTPQTEPVLPKLKKVLKKKLAVEDGADYLFVLGGDGFFVSTAANYNCAGCKVVGINTG 66 Query: 70 SVGFL--MNEYCI-ENLVERLSVAVECTFHPLKMTVFDYDNSICAENILAINEVSIIRKP 126 +GF NE + +N +L + F + + D+ I L +NE+++ Sbjct: 67 HLGFYTSFNETDLDQNFANKLD---QLKFTQIDLLEVQIDDQI----HLVLNELAVYTN- 118 Query: 127 GQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPIL-P-------LE 178 A + + +D++ + GL++ GSTA SA G ++ P +E Sbjct: 119 ------TAYPINIFIDNEF-WEKYRGSGLLIGPRTGSTALAKSAKGAVIFPRIDVIQIIE 171 Query: 179 SRHLL----LTPVSPFKPRRWHGAILPNDVMIEIQVLE---HKQRPVI 219 LL T SP ILP D +E ++ + H Q P Sbjct: 172 LNPLLHPNQTTIQSPI--------ILPIDTKVEFEIKKAFDHDQFPRF 211 >gnl|CDD|178517 PLN02929, PLN02929, NADH kinase. Length = 301 Score = 33.5 bits (77), Expect = 0.066 Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Query: 154 GLVVSTPIGSTAYNFSALGPILPLESRHL---LLTPVSP--FKPRRWHGAILPNDVM 205 GL VST GSTA SA G +PL SR L + P+SP HG P M Sbjct: 198 GLRVSTAAGSTAAMLSAGGFPMPLLSRDLQYMVREPISPGHPPKSLMHGFYKPGQHM 254 Score = 27.7 bits (62), Expect = 3.3 Identities = 9/19 (47%), Positives = 15/19 (78%) Query: 36 EADVIVVLGGDGFMLQSFH 54 + D++V +GGDG +LQ+ H Sbjct: 64 DVDLVVAVGGDGTLLQASH 82 >gnl|CDD|148611 pfam07103, DUF1365, Protein of unknown function (DUF1365). This family consists of several bacterial and plant proteins of around 250 residues in length. The function of this family is unknown. Length = 244 Score = 27.9 bits (63), Expect = 2.7 Identities = 9/39 (23%), Positives = 13/39 (33%), Gaps = 4/39 (10%) Query: 187 VSPFKPR----RWHGAILPNDVMIEIQVLEHKQRPVIAT 221 VSPF P R+ + + + I AT Sbjct: 152 VSPFMPMDGRYRFRFSPPGERLRVHIDNHREGGPVFDAT 190 >gnl|CDD|152173 pfam11737, DUF3300, Protein of unknown function (DUF3300). This hypothetical bacterial gene product has a long hydrophobic segment and is thus likely to be a membrane protein. Length = 230 Score = 28.0 bits (63), Expect = 2.8 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 11/43 (25%) Query: 201 PNDVMIEIQVLEHK-----------QRPVIATADRLAIEPVSR 232 DVM IQ L K Q+ V D++ IEP Sbjct: 96 EADVMDAIQRLRQKAQAAGNLKSTDQQKVTVEEDQIVIEPAQP 138 >gnl|CDD|179255 PRK01222, PRK01222, N-(5'-phosphoribosyl)anthranilate isomerase; Provisional. Length = 210 Score = 27.5 bits (62), Expect = 3.5 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Query: 25 FVKIYGNSTSEEADVIVVLGGD--GFMLQSFHQSKEY 59 VKI G +T E+A+ LG D GF+ + +S Y Sbjct: 4 RVKICGITTPEDAEAAAELGADAIGFVF--YPKSPRY 38 >gnl|CDD|149924 pfam09018, Phage_Capsid_P3, P3 major capsid protein. The P3 major capsid protein adopts a 'double-barrel' structure comprising two eight-stranded viral beta-barrels or jelly rolls, each of which contains a 12-residue alpha-helix. This protein then trimerizes through a 'trimerisation loop' sequence, and is incorporated within the viral capsid. Length = 394 Score = 27.0 bits (59), Expect = 4.9 Identities = 10/17 (58%), Positives = 14/17 (82%) Query: 60 DKPIYGMNCGSVGFLMN 76 DKPIY + G+VGF++N Sbjct: 346 DKPIYTLQYGNVGFVVN 362 >gnl|CDD|132534 TIGR03495, phage_LysB, phage lysis regulatory protein, LysB family. Members of this protein family are phage lysis regulatory protein, including the well-studied protein LysB (lysis protein B) of Enterobacteria phage P2. For members of this family, genes are found in phage or in prophage regions of bacterial genomes, typically near a phage lysozyme or phage holin. Length = 135 Score = 26.6 bits (59), Expect = 6.9 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 6/31 (19%) Query: 193 RRWHGAILPNDVMIEIQVLEHKQRPVIATAD 223 RRW LP+DV I ++ QRP + A Sbjct: 95 RRWADTPLPDDV-IRLR-----QRPALTGAA 119 >gnl|CDD|180036 PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional. Length = 360 Score = 26.2 bits (59), Expect = 8.5 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 2/17 (11%) Query: 163 STAYNFSALGP-ILPLE 178 YNFSA GP +LP E Sbjct: 2 MRVYNFSA-GPAMLPEE 17 >gnl|CDD|179844 PRK04405, prsA, peptidylprolyl isomerase; Provisional. Length = 298 Score = 26.3 bits (58), Expect = 8.7 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 3 RNIQKIHFKASNAKKAQEAYDKFVKIYGNSTSEEADVIVVLGGDGFMLQSFHQS 56 R ++K + K + KK + Y+ + K YG+S VL +G SF Q+ Sbjct: 65 RALEKQYGKKVSTKKVDKQYNSYKKQYGSSFDS------VLSQNGMTTSSFKQN 112 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.320 0.135 0.392 Gapped Lambda K H 0.267 0.0686 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 4,187,923 Number of extensions: 260965 Number of successful extensions: 590 Number of sequences better than 10.0: 1 Number of HSP's gapped: 568 Number of HSP's successfully gapped: 40 Length of query: 264 Length of database: 5,994,473 Length adjustment: 92 Effective length of query: 172 Effective length of database: 4,006,537 Effective search space: 689124364 Effective search space used: 689124364 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 56 (25.4 bits)