HHsearch results for GI: 254780755 and protein with PDBid: 3mzv_A
>3mzv_A Decaprenyl diphosphate synthase; transferase, structural genomics, PSI-2, protein structure initiative; 1.90A {Rhodobacter capsulatus}
Probab=100.00 E-value=0 Score=566.14 Aligned_cols=320 Identities=45% Similarity=0.717 Sum_probs=311.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4799999999999999999860778-758999999999679822799999999997089857866665578999999987
Q gi|254780755|r 2 KMLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 (322)
Q Consensus 2 ~~l~~~~~~~l~~v~~~i~~~~~~~-~~~l~~~~~~~~~~gGKr~Rp~l~~l~~~~~~~~~~~~~~~a~~iEliH~asLi 80 (322)
..+.+++.+++++|+..|.+.+.++ .|.+++++.|++.+||||+||+||+++++++|++.+.++++|+++|++|+||||
T Consensus 12 ~~l~~~l~~~l~~v~~~i~~~l~s~~~~~i~~~~~~~~~~gGKr~Rp~l~ll~~~~~~~~~~~~~~~A~aiEliH~asLI 91 (341)
T 3mzv_A 12 DRLAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYGGPFHVHLAATVEFIHTATLL 91 (341)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHSCCSSCTHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999844477167999999998189962889999999998399707799999999999999998
Q ss_pred HHHHHCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 52110112200110121010011023431245788887642102431100012345677777754565542132210357
Q gi|254780755|r 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 (322)
Q Consensus 81 HDDI~D~~~~RRg~~t~~~~~G~~~Ail~GD~l~~~a~~~l~~~~~~~~~~~~~~~~~~l~~Gq~~d~~~~~~~~~s~~~ 160 (322)
||||||+|++|||+||+|.+||+++|||+||||++.+|..+++.++.++.+.+++++..+++||..|+.+..+...++++
T Consensus 92 HDDI~D~~~~RRG~pt~~~~~G~~~AIl~GD~L~~~a~~~l~~~~~~~~~~~~~~~~~~~~~Gq~~~~~~~~~~~~~~~~ 171 (341)
T 3mzv_A 92 HDDVVDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTDTGNMRVMEILANASAVIAEGEVLQLTAAQNLATTEDI 171 (341)
T ss_dssp HHHC------CTTSCCHHHHSCHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCCHHH
T ss_pred CCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHH
T ss_conf 18766678655699975330682499998899999999864213654799999998677606007998750267998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCH
Q ss_conf 89899864335555443210001122221015799999731116898876411236700038401234542136532100
Q gi|254780755|r 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 (322)
Q Consensus 161 y~~ii~~KTa~Lf~~~~~~ga~lag~~~~~~~~l~~fG~~lG~afQI~DD~ld~~g~~~~~GK~~g~Dl~egk~Tlpii~ 240 (322)
|++|+.+|||+||++||.+||+++|++++..+.+..||+++|+||||+||++|++|+++.+|||+|+|+++||+|||+++
T Consensus 172 yl~~i~~KTa~L~~~~~~~ga~l~~~~~~~~~~l~~~G~~lG~AFQI~DD~ld~~~d~~~~GK~~g~Dl~egk~Tlpli~ 251 (341)
T 3mzv_A 172 YLRVIRGKTAALFSAATEVGGIIGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGGKSAEIGKNTGDDFRERKLTMPVIK 251 (341)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHCCCCHHHHHH
T ss_conf 99999999999999999984101179989999999999999999998888765307866638552758656984199999
Q ss_pred HHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 11014311000134320368999899999999999749699999999999999999842089998999999999999603
Q gi|254780755|r 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 (322)
Q Consensus 241 al~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~ll~~~gai~~~~~~~~~~~~~A~~~L~~lp~~~~k~~L~~L~~~ii~R 320 (322)
|+++.++.++..+..+++++..++++++++++++.++|++++|+..++.|.++|++.|+.||+++.|+.|.+|++|+++|
T Consensus 252 al~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~~l~~~g~~~~a~~~~~~~~~~A~~~L~~lp~s~~k~~L~~L~~~v~~R 331 (341)
T 3mzv_A 252 AVALADEAERAFWKRVIEKGDQQDGDLEHAMALMTKHGTLEATRLAAIGWTDTARKALAKLPDHPLRQMLDDLADYVVER 331 (341)
T ss_dssp HHHTCCHHHHHHHHHHTTSCCCCTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTGG
T ss_pred HHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99869999899999998668999999999999999869899999999999999999986699978999999999999881
Q ss_pred C
Q ss_conf 7
Q gi|254780755|r 321 L 321 (322)
Q Consensus 321 ~ 321 (322)
.
T Consensus 332 ~ 332 (341)
T 3mzv_A 332 V 332 (341)
T ss_dssp G
T ss_pred C
T ss_conf 8