BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780755|ref|YP_003065168.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter asiaticus str. psy62] (322 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780755|ref|YP_003065168.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040432|gb|ACT57228.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 322 Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/322 (100%), Positives = 322/322 (100%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR Sbjct: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM Sbjct: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS Sbjct: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL Sbjct: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC Sbjct: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDSSWKKSLMEVVDFCLQRLN Sbjct: 301 LPDSSWKKSLMEVVDFCLQRLN 322 >gi|315121918|ref|YP_004062407.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495320|gb|ADR51919.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 322 Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust. Identities = 268/322 (83%), Positives = 296/322 (91%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MKMLE LT+KDM KVN LI+ RICS+V +IPDVVKYLIFSGGKRLRPMLT+ATALMLEYR Sbjct: 1 MKMLEALTVKDMNKVNLLIMDRICSNVTIIPDVVKYLIFSGGKRLRPMLTVATALMLEYR 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+NHVLLACAIEFIHTATLLHDDVVDDSALRRGK AARLVWGNQ SVLVGDFLLSQAF M Sbjct: 61 GNNHVLLACAIEFIHTATLLHDDVVDDSALRRGKAAARLVWGNQASVLVGDFLLSQAFSM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 VIETKSQEAL+ LSLVACTL+EGELRQLS+SKNL+VTEEDYL+VIKSKTA LF AALEVS Sbjct: 121 VIETKSQEALKVLSLVACTLSEGELRQLSISKNLNVTEEDYLYVIKSKTAALFVAALEVS 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 SLI+G Q+SVR ALKSYG NLGIAFQLVDD LDYRGEVNEMGKNIG+DFRNGKPTLPVIL Sbjct: 181 SLISGAQDSVRDALKSYGTNLGIAFQLVDDALDYRGEVNEMGKNIGDDFRNGKPTLPVIL 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AFQR T +EKNFW+STI DG+ISVENL+KA I+++E ALVDT+ +AY YGQKAKDSL+ Sbjct: 241 AFQRATNQEKNFWRSTIGDGEISVENLQKALIMIQECNALVDTKSQAYYYGQKAKDSLQD 300 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP++ WK SL+EVVDFCLQRL+ Sbjct: 301 LPNNPWKASLIEVVDFCLQRLD 322 >gi|222085054|ref|YP_002543583.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter K84] gi|221722502|gb|ACM25658.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter K84] Length = 455 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 193/322 (59%), Positives = 250/322 (77%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V ++LI SGGKRLRPMLT+A+A + Y+ Sbjct: 134 IKPLVDLTKADMERVNQLILSKAGSDVQMIPEVAEHLISSGGKRLRPMLTIASAALYNYQ 193 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 194 GDNHIKLATSVEFLHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 253 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S EAL+ LS AC +AEGE+ QLS+SKN++ TE+DYL VI++KTA LFSAA EV Sbjct: 254 MVEVGSLEALDVLSSAACVIAEGEVLQLSVSKNMETTEDDYLSVIRAKTAALFSAAAEVG 313 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYG NLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 314 PIVANAGKAERNALKSYGTNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 373 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT++E+ FW+ I G S ENL+KA ++ + AL DT RA YG A+D+L Sbjct: 374 AYRRGTEKERAFWREAIETGNNSDENLEKALGLITKYGALNDTIARAVHYGTIARDALAP 433 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP++ WK +LMEV+DFC++R+N Sbjct: 434 LPETPWKSALMEVIDFCIERVN 455 >gi|86356521|ref|YP_468413.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42] gi|86280623|gb|ABC89686.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42] Length = 346 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 192/322 (59%), Positives = 247/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A + +YR Sbjct: 25 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASLFDYR 84 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 85 GDNHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 144 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 145 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 204 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 205 PIVAEAGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 264 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT+ E+ FW+ I G S NL+KA ++ + L DT RA YG A+D+L Sbjct: 265 AYRRGTEDERAFWRDAIEAGNSSDANLEKALGLITKYGTLADTIGRAIHYGTIARDALAP 324 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ WK +LMEV+DFC++R+N Sbjct: 325 LPDTVWKSALMEVIDFCIERVN 346 >gi|327192818|gb|EGE59745.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CNPAF512] Length = 338 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 192/322 (59%), Positives = 247/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A + +YR Sbjct: 17 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASLFDYR 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+NHV LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GENHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVAEAGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT+ E+ FW+ I G S NL+KA ++ + L DT RA YG A+D+L Sbjct: 257 AYRRGTEDERAFWRDAIEAGNSSDANLEKALGLITKYGTLADTIGRAVHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ WK +LMEV+DFC++R+N Sbjct: 317 LPDTVWKSALMEVIDFCIERVN 338 >gi|190890586|ref|YP_001977128.1| octaprenyl-diphosphate synthase [Rhizobium etli CIAT 652] gi|190695865|gb|ACE89950.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CIAT 652] Length = 346 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 192/322 (59%), Positives = 247/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A + +YR Sbjct: 25 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASLFDYR 84 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+NHV LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 85 GENHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 144 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 145 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLAVIRAKTAALFAAAAEVG 204 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 205 PIVAEAGKSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 264 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT+ E+ FW+ I G S NL+KA ++ + L DT RA YG A+D+L Sbjct: 265 AYRRGTEDERAFWRDAIEAGNSSDANLEKALGLITKYGTLADTIGRAVHYGTIARDALAP 324 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ WK +LMEV+DFC++R+N Sbjct: 325 LPDTVWKSALMEVIDFCIERVN 346 >gi|116250711|ref|YP_766549.1| octaprenyl-diphosphate synthase [Rhizobium leguminosarum bv. viciae 3841] gi|115255359|emb|CAK06434.1| putative octaprenyl-diphosphate synthase [Rhizobium leguminosarum bv. viciae 3841] Length = 338 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 191/322 (59%), Positives = 249/322 (77%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A + +YR Sbjct: 17 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASASLFDYR 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+NH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GENHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A V S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVAEVGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT+ E+ FW+ I G + NL+KA ++ + L DT RA YG A+D+L Sbjct: 257 AYRRGTEDERAFWRDAIEAGNSTDANLEKALGLITKYGTLSDTIGRAIHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ WK +LMEV+DFC++R+N Sbjct: 317 LPDTVWKSALMEVIDFCIERVN 338 >gi|209548129|ref|YP_002280046.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533885|gb|ACI53820.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 338 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 192/322 (59%), Positives = 247/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A + +YR Sbjct: 17 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASLFDYR 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+NHV LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GENHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSSAACIIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVAEAGKSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT+ E+ FW+ I G + NL+KA ++ + L DT RA YG A+D+L Sbjct: 257 AYRRGTEDERAFWRDAIEAGNSTDANLEKALGLITKYGTLSDTIGRAVHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ WK SLMEV+DFC++R+N Sbjct: 317 LPDTVWKSSLMEVIDFCIERVN 338 >gi|254701208|ref|ZP_05163036.1| hypothetical protein Bsuib55_10162 [Brucella suis bv. 5 str. 513] Length = 338 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 186/319 (58%), Positives = 236/319 (73%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y GD Sbjct: 20 LVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYEGDG 79 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M+++ Sbjct: 80 HVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKMMVD 139 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV +I Sbjct: 140 VGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVGPII 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL+++ Sbjct: 200 AGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVILSYR 259 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RGT E+ FWK I G +L+KA +M ++RA+ DT RA +G+ A+D+L L Sbjct: 260 RGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHRAIADTVQRARHFGEIARDALAPLKA 319 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S K +L+EVVDFC+ R+N Sbjct: 320 SPQKDALIEVVDFCISRVN 338 >gi|241203314|ref|YP_002974410.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857204|gb|ACS54871.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 338 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 191/322 (59%), Positives = 248/322 (77%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A + +YR Sbjct: 17 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASASLFDYR 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+NHV LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GENHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVAEAGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT+ E+ FW+ I G + NL+KA ++ + L DT RA YG A+D+L Sbjct: 257 AYRRGTEDERAFWRDAIEAGNSTDANLEKALGLITKYGTLSDTIGRAIHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ WK +LMEV+DFC++R+N Sbjct: 317 LPDTVWKSALMEVIDFCIERVN 338 >gi|261751747|ref|ZP_05995456.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] gi|261741500|gb|EEY29426.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] Length = 340 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 186/319 (58%), Positives = 236/319 (73%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y GD Sbjct: 22 LVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYEGDG 81 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M+++ Sbjct: 82 HVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKMMVD 141 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV +I Sbjct: 142 VGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVGPII 201 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL+++ Sbjct: 202 AGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVILSYR 261 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RGT E+ FWK I G +L+KA +M ++RA+ DT RA +G+ A+D+L L Sbjct: 262 RGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHRAIADTVQRARHFGEIARDALAPLKA 321 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S K +L+EVVDFC+ R+N Sbjct: 322 SPQKDALIEVVDFCISRVN 340 >gi|159184398|ref|NP_353656.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str. C58] gi|159139711|gb|AAK86441.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str. C58] Length = 338 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 192/322 (59%), Positives = 246/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL R SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 17 VKPLVDLTRPDMERVNQLILSRAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 77 GDNHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL Sbjct: 197 PIVAKTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT+ E+ FW++ I G+ S ENL+KA ++ + L DT RA YG A+D+L Sbjct: 257 SYRRGTQDERAFWRNAIEKGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S WK +L+EV+DFC++RLN Sbjct: 317 LPQSPWKNALLEVIDFCIERLN 338 >gi|325292016|ref|YP_004277880.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3] gi|325059869|gb|ADY63560.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3] Length = 338 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 191/322 (59%), Positives = 248/322 (77%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL R SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 17 VKPLVDLTRADMERVNQLILSRAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 77 GDHHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL Sbjct: 197 PIVAKTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT+ E+ FW++ I +G+ S ENL+KA ++ + L DT RA YG A+D+L Sbjct: 257 SYRRGTQDERAFWRNAIENGESSDENLEKALGLIAKYNGLGDTIGRATHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+S WK +L+EV+DFC++RLN Sbjct: 317 LPESPWKNALLEVIDFCIERLN 338 >gi|294851781|ref|ZP_06792454.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026] gi|294820370|gb|EFG37369.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026] Length = 340 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 186/319 (58%), Positives = 236/319 (73%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y GD Sbjct: 22 LVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYEGDG 81 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M+++ Sbjct: 82 HVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKMMVD 141 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV +I Sbjct: 142 VGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVGPII 201 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL+++ Sbjct: 202 AGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVILSYR 261 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L L Sbjct: 262 RGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAPLKA 321 Query: 304 SSWKKSLMEVVDFCLQRLN 322 SS K +L+EVVDFC+ R+N Sbjct: 322 SSQKDALIEVVDFCISRVN 340 >gi|112950409|gb|ABI26723.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens] Length = 358 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 191/322 (59%), Positives = 246/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 37 VKPLVDLTRPDMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 96 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 97 GDNHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 156 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 157 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 216 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL Sbjct: 217 PIVAKTDKATRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 276 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT+ E+ FW++ I G+ S ENL+KA ++ + L DT RA YG A+D+L Sbjct: 277 SYRRGTQDERAFWRTAIEKGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAP 336 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S WK +L+EV+DFC++RLN Sbjct: 337 LPQSPWKDALLEVIDFCIERLN 358 >gi|37903500|gb|AAP56240.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens] Length = 358 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 191/322 (59%), Positives = 246/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 37 VKPLVDLTRPDMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 96 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 97 GDNHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 156 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 157 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 216 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL Sbjct: 217 PIVAKTDKATRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 276 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT+ E+ FW++ I G+ S ENL+KA ++ + L DT RA YG A+D+L Sbjct: 277 SYRRGTQDERAFWRTAIEKGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAP 336 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S WK +L+EV+DFC++RLN Sbjct: 337 LPQSPWKDALLEVIDFCIERLN 358 >gi|306842306|ref|ZP_07474966.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO2] gi|306287563|gb|EFM59019.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO2] Length = 322 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 185/322 (57%), Positives = 236/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 1 MQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 61 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 121 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 181 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYSGSAADLGKNTGDDFREGKITLPVIL 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 241 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 300 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 S K +L+EVVDFC+ R+N Sbjct: 301 FKASPQKDALIEVVDFCISRVN 322 >gi|67866738|gb|AAY82368.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens] Length = 358 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 191/322 (59%), Positives = 248/322 (77%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL R SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 37 VKPLVDLTRADMEQVNQLILSRAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 96 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 97 GDHHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 156 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 157 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 216 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL Sbjct: 217 PIVAKTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 276 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT+ E+ FW++ I +G+ S ENL+KA ++ + L DT RA YG A+D+L Sbjct: 277 SYRRGTQDERAFWRNAIENGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAP 336 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+S WK +L+EV+DFC++RLN Sbjct: 337 LPESPWKNALLEVIDFCIERLN 358 >gi|153007864|ref|YP_001369079.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] gi|151559752|gb|ABS13250.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] Length = 356 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/319 (57%), Positives = 236/319 (73%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L DLT DM +VN +IL R SDVEMIP+V +LI SGGKRLRPM+TLA A M Y GD Sbjct: 38 LVDLTKADMARVNEMILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLAAARMFGYEGDG 97 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M+++ Sbjct: 98 HVRLATAVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFKMMVD 157 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV +I Sbjct: 158 VGSLDALDVLATSASVIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAGEVGPII 217 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL+++ Sbjct: 218 AGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVILSYR 277 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RGT E+ FWK I DG +L+KA +M ++ A+ DT RA +G+ A+D+L L Sbjct: 278 RGTDDERAFWKHAIEDGASDDASLEKAIGLMTKHGAIADTVQRARHFGEIARDALAPLKA 337 Query: 304 SSWKKSLMEVVDFCLQRLN 322 + K +L+EV+DFC+ R+N Sbjct: 338 TPQKDALIEVIDFCISRVN 356 >gi|62289388|ref|YP_221181.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str. 9-941] gi|189023639|ref|YP_001934407.1| polyprenyl synthetase [Brucella abortus S19] gi|254693184|ref|ZP_05155012.1| hypothetical protein Babob3T_00652 [Brucella abortus bv. 3 str. Tulya] gi|254696828|ref|ZP_05158656.1| hypothetical protein Babob28_03708 [Brucella abortus bv. 2 str. 86/8/59] gi|254707866|ref|ZP_05169694.1| hypothetical protein BpinM_13091 [Brucella pinnipedialis M163/99/10] gi|254709549|ref|ZP_05171360.1| hypothetical protein BpinB_04602 [Brucella pinnipedialis B2/94] gi|254713033|ref|ZP_05174844.1| hypothetical protein BcetM6_06634 [Brucella ceti M644/93/1] gi|254716613|ref|ZP_05178424.1| hypothetical protein BcetM_09363 [Brucella ceti M13/05/1] gi|256031043|ref|ZP_05444657.1| hypothetical protein BpinM2_10374 [Brucella pinnipedialis M292/94/1] gi|256060537|ref|ZP_05450705.1| hypothetical protein Bneo5_09318 [Brucella neotomae 5K33] gi|256254446|ref|ZP_05459982.1| hypothetical protein BcetB_09183 [Brucella ceti B1/94] gi|256256948|ref|ZP_05462484.1| hypothetical protein Babob9C_06236 [Brucella abortus bv. 9 str. C68] gi|260168175|ref|ZP_05754986.1| polyprenyl synthetase family protein [Brucella sp. F5/99] gi|306839902|ref|ZP_07472700.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. NF 2653] gi|306845036|ref|ZP_07477617.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO1] gi|62195520|gb|AAX73820.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str. 9-941] gi|189019211|gb|ACD71933.1| Polyprenyl synthetase [Brucella abortus S19] gi|306274668|gb|EFM56457.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO1] gi|306405088|gb|EFM61369.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. NF 2653] gi|326408435|gb|ADZ65500.1| Polyprenyl synthetase [Brucella melitensis M28] gi|326538151|gb|ADZ86366.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 338 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 185/319 (57%), Positives = 235/319 (73%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y GD Sbjct: 20 LVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYEGDG 79 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M+++ Sbjct: 80 HVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKMMVD 139 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV +I Sbjct: 140 VGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVGPII 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL+++ Sbjct: 200 AGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVILSYR 259 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L L Sbjct: 260 RGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAPLKA 319 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S K +L+EVVDFC+ R+N Sbjct: 320 SPQKDALIEVVDFCISRVN 338 >gi|237814874|ref|ZP_04593872.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella abortus str. 2308 A] gi|237789711|gb|EEP63921.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella abortus str. 2308 A] Length = 363 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 185/319 (57%), Positives = 235/319 (73%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y GD Sbjct: 45 LVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYEGDG 104 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M+++ Sbjct: 105 HVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKMMVD 164 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV +I Sbjct: 165 VGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVGPII 224 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL+++ Sbjct: 225 AGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVILSYR 284 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L L Sbjct: 285 RGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAPLKA 344 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S K +L+EVVDFC+ R+N Sbjct: 345 SPQKDALIEVVDFCISRVN 363 >gi|82699315|ref|YP_413889.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225851937|ref|YP_002732170.1| hypothetical protein BMEA_A0432 [Brucella melitensis ATCC 23457] gi|254688701|ref|ZP_05151955.1| hypothetical protein Babob68_00654 [Brucella abortus bv. 6 str. 870] gi|254718581|ref|ZP_05180392.1| hypothetical protein Bru83_03399 [Brucella sp. 83/13] gi|254729734|ref|ZP_05188312.1| hypothetical protein Babob42_00662 [Brucella abortus bv. 4 str. 292] gi|256044121|ref|ZP_05447028.1| hypothetical protein Bmelb1R_06464 [Brucella melitensis bv. 1 str. Rev.1] gi|256112919|ref|ZP_05453832.1| hypothetical protein Bmelb3E_09565 [Brucella melitensis bv. 3 str. Ether] gi|256159107|ref|ZP_05456928.1| hypothetical protein BcetM4_09356 [Brucella ceti M490/95/1] gi|256368857|ref|YP_003106363.1| polyprenyl synthetase family protein [Brucella microti CCM 4915] gi|260545860|ref|ZP_05821601.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260563478|ref|ZP_05833964.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260754179|ref|ZP_05866527.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260757399|ref|ZP_05869747.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260761223|ref|ZP_05873566.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260883204|ref|ZP_05894818.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|261213426|ref|ZP_05927707.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|261218414|ref|ZP_05932695.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261221617|ref|ZP_05935898.1| polyprenyl synthetase [Brucella ceti B1/94] gi|261315356|ref|ZP_05954553.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261317077|ref|ZP_05956274.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261320737|ref|ZP_05959934.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261324532|ref|ZP_05963729.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261757634|ref|ZP_06001343.1| polyprenyl synthetase [Brucella sp. F5/99] gi|265983557|ref|ZP_06096292.1| polyprenyl synthetase [Brucella sp. 83/13] gi|265988115|ref|ZP_06100672.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|265990531|ref|ZP_06103088.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265994359|ref|ZP_06106916.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|265997580|ref|ZP_06110137.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|265999601|ref|ZP_05467084.2| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|297247801|ref|ZP_06931519.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196] gi|82615416|emb|CAJ10385.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225640302|gb|ACO00216.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|255999015|gb|ACU47414.1| polyprenyl synthetase family protein [Brucella microti CCM 4915] gi|260097267|gb|EEW81142.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260153494|gb|EEW88586.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260667717|gb|EEX54657.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260671655|gb|EEX58476.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260674287|gb|EEX61108.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260872732|gb|EEX79801.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|260915033|gb|EEX81894.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|260920201|gb|EEX86854.1| polyprenyl synthetase [Brucella ceti B1/94] gi|260923503|gb|EEX90071.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261293427|gb|EEX96923.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261296300|gb|EEX99796.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261300512|gb|EEY04009.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261304382|gb|EEY07879.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261737618|gb|EEY25614.1| polyprenyl synthetase [Brucella sp. F5/99] gi|262552048|gb|EEZ08038.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|262765472|gb|EEZ11261.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|263001315|gb|EEZ13890.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263094886|gb|EEZ18624.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|264660312|gb|EEZ30573.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|264662149|gb|EEZ32410.1| polyprenyl synthetase [Brucella sp. 83/13] gi|297174970|gb|EFH34317.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196] Length = 340 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 185/319 (57%), Positives = 235/319 (73%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y GD Sbjct: 22 LVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYEGDG 81 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M+++ Sbjct: 82 HVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKMMVD 141 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV +I Sbjct: 142 VGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVGPII 201 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL+++ Sbjct: 202 AGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVILSYR 261 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L L Sbjct: 262 RGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAPLKA 321 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S K +L+EVVDFC+ R+N Sbjct: 322 SPQKDALIEVVDFCISRVN 340 >gi|17987815|ref|NP_540449.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] gi|17983542|gb|AAL52713.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] Length = 362 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 185/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 41 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 100 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 101 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 160 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 161 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 220 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 221 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 280 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 281 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 340 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S K +L+EVVDFC+ R+N Sbjct: 341 LKASPQKDALIEVVDFCISRVN 362 >gi|225626910|ref|ZP_03784949.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella ceti str. Cudo] gi|225618567|gb|EEH15610.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella ceti str. Cudo] Length = 363 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 185/319 (57%), Positives = 235/319 (73%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y GD Sbjct: 45 LVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYEGDG 104 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M+++ Sbjct: 105 HVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKMMVD 164 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV +I Sbjct: 165 VGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVGPII 224 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL+++ Sbjct: 225 AGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVILSYR 284 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L L Sbjct: 285 RGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAPLKA 344 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S K +L+EVVDFC+ R+N Sbjct: 345 SPQKDALIEVVDFCISRVN 363 >gi|163842683|ref|YP_001627087.1| hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445] gi|163673406|gb|ABY37517.1| Hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445] Length = 340 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 185/319 (57%), Positives = 235/319 (73%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y GD Sbjct: 22 LVDLTRADMARVNELILSRAASDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYEGDG 81 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M+++ Sbjct: 82 HVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKMMVD 141 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV +I Sbjct: 142 VGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVGPII 201 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL+++ Sbjct: 202 AGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVILSYR 261 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L L Sbjct: 262 RGTDEERAFWKGAIEGGASYDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAPLKA 321 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S K +L+EVVDFC+ R+N Sbjct: 322 SPQKDALIEVVDFCISRVN 340 >gi|163761016|ref|ZP_02168094.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica DFL-43] gi|162281797|gb|EDQ32090.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica DFL-43] Length = 338 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 185/322 (57%), Positives = 238/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L D T DME+VN LIL + SDV MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 17 VKPLVDKTRGDMERVNQLILSKAGSDVAMIPEVANHLISSGGKRLRPMLTLASATMFGYS 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA ++EF+HTATLLHDDVVD+S LRRG+ AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GDFHIKLATSVEFMHTATLLHDDVVDESDLRRGRSTARMIWGNQASVLVGDFLLGQAFKM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S EAL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LFSAA EV Sbjct: 137 MVEVGSLEALDVLSTAAAVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFSAACEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA + R AL+SYG+NLG+AFQL+DDVLDY G N++GKN+G+DFR GK TLPV+L Sbjct: 197 PIIAETSKAERSALRSYGINLGLAFQLIDDVLDYGGSANDLGKNVGDDFREGKITLPVVL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RG++ E+ FW+ I GK L+KA ++ + +L DT RA Y A+D+L Sbjct: 257 AYRRGSEAERAFWREAIEGGKNDDAALEKALGLITKYGSLKDTMARAEHYASIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K +L+EV+ FCL R N Sbjct: 317 LPDSDEKAALLEVIAFCLNRAN 338 >gi|23501305|ref|NP_697432.1| polyprenyl synthetase family protein [Brucella suis 1330] gi|161618375|ref|YP_001592262.1| hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365] gi|254703754|ref|ZP_05165582.1| hypothetical protein Bsuib36_07492 [Brucella suis bv. 3 str. 686] gi|260566991|ref|ZP_05837461.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261754401|ref|ZP_05998110.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] gi|23347194|gb|AAN29347.1| polyprenyl synthetase family protein [Brucella suis 1330] gi|161335186|gb|ABX61491.1| Hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365] gi|260156509|gb|EEW91589.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261744154|gb|EEY32080.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] Length = 340 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 185/319 (57%), Positives = 235/319 (73%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y GD Sbjct: 22 LVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYEGDG 81 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M+++ Sbjct: 82 HVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKMMVD 141 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV +I Sbjct: 142 VGSFDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVGPII 201 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL+++ Sbjct: 202 AGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVILSYR 261 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L L Sbjct: 262 RGTDEERAFWKGAIEGGASYDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAPLKA 321 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S K +L+EVVDFC+ R+N Sbjct: 322 SPQKDALIEVVDFCISRVN 340 >gi|15964599|ref|NP_384952.1| putative octaprenyl-diphosphate synthase protein [Sinorhizobium meliloti 1021] gi|307309345|ref|ZP_07589008.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C] gi|307320081|ref|ZP_07599502.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83] gi|15073777|emb|CAC45418.1| Putative octaprenyl-diphosphate synthase [Sinorhizobium meliloti 1021] gi|306894296|gb|EFN25061.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83] gi|306900214|gb|EFN30832.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C] Length = 338 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 187/322 (58%), Positives = 241/322 (74%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLTL DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 VKPLVDLTLSDMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 77 GDGHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSIDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAASEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + R ALKSYG NLG+AFQLVDDVLDY G +++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVAGGSKADRNALKSYGTNLGLAFQLVDDVLDYGGTSSDLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT +++ FW+ I G NL+KA ++R L DT RA YG A+D+L Sbjct: 257 SYRRGTPQDRAFWREAIEGGASDAANLEKALGLIRRYGGLTDTIARAKHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S WK +L+EV+DFC+ R++ Sbjct: 317 LPASPWKSALVEVIDFCIDRVS 338 >gi|239831276|ref|ZP_04679605.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] gi|239823543|gb|EEQ95111.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] Length = 356 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 181/322 (56%), Positives = 238/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN +IL R SDVEMIP+V +LI SGGKRLRPM+TLA A M Y Sbjct: 35 VQPLVDLTKADMARVNEMILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLAAARMFGYE 94 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 95 GDGHVRLATAVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFKM 154 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 155 MVDVGSLDALDVLATSASVIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAGEVG 214 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + + R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 215 PIIAGARPADRVALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 274 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I +G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 275 SYRRGTDDERAFWKHAIEEGASDDASLQKAIGLMTKHGAIADTVQRARHFGEIARDALAP 334 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L + K +L+EV+DFC+ R+N Sbjct: 335 LKATPQKDALIEVIDFCISRVN 356 >gi|260460355|ref|ZP_05808607.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] gi|259034000|gb|EEW35259.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] Length = 338 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 182/322 (56%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DM +VN LIL + SDVEMIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 IKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTLAAAQMFGYS 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV LA A+EF+HTATLLHDDVVD+S +RRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GEGHVKLATAVEFMHTATLLHDDVVDESGMRRGKKTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL+ LS A +AEGE+ QL+ +KNL+ TE+++ VIK+KTA LFSAA EV Sbjct: 137 MVDVGSLEALDILSSAASIIAEGEVMQLAAAKNLETTEDEHFAVIKAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA + R AL+SYGMNLG+AFQL+DD LDY G ++GKN+G+DFR GK TLPVIL Sbjct: 197 PVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGKNVGDDFREGKVTLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RG+K E+ FWK I D + L+KA +M + A+ DT RA +G+ A+D+L Sbjct: 257 AYRRGSKAERTFWKRAIEDNVVDDAGLEKAIGLMTRHGAIADTIGRARHFGEIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L ++ K +L++V+DFC+ R+N Sbjct: 317 LEETPQKSALIDVIDFCISRVN 338 >gi|13476175|ref|NP_107745.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099] gi|14026935|dbj|BAB53531.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099] Length = 338 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 182/322 (56%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DM +VN LIL + SDVEMIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 IKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTLAAAQMFGYA 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV LA ++EF+HTATLLHDDVVD+S +RRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GEGHVKLATSVEFMHTATLLHDDVVDESGMRRGKKTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL+ LS A +AEGE+ QL+ +KNL+ TE+++ VIK+KTA LFSAA EV Sbjct: 137 MVDVGSLEALDILSSAASIIAEGEVMQLAAAKNLETTEDEHFAVIKAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA + R AL+SYGMNLG+AFQL+DD LDY G ++GKN+G+DFR GK TLPVIL Sbjct: 197 PVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGKNVGDDFREGKVTLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGTK E+ FWK I D + L+KA +M + A+ DT RA +G+ A+D+L Sbjct: 257 AYRRGTKAERTFWKRAIEDNVVDDAGLEKAIGLMTRHGAIADTIGRARHFGEIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L ++ K +L++V+DFC+ R+N Sbjct: 317 LEETRQKSALIDVIDFCISRVN 338 >gi|319784751|ref|YP_004144227.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170639|gb|ADV14177.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 338 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/322 (56%), Positives = 235/322 (72%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DM +VN LIL + SDVEMIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 IKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTLAAAQMFGYA 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV LA ++EF+HTATLLHDDVVD+S +RRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GEGHVKLATSVEFMHTATLLHDDVVDESGMRRGKKTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL+ LS A +AEGE+ QL+ +KNL+ TE+++ VIK+KTA LFSAA EV Sbjct: 137 MVDVGSLEALDILSSAASIIAEGEVMQLAAAKNLETTEDEHFAVIKAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA + R AL+SYGMNLG+AFQL+DD LDY G ++GKN+G+DFR GK TLPVIL Sbjct: 197 PVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGKNVGDDFREGKVTLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGTK E+ FWK I D L+KA +M + A+ DT RA +G+ A+D+L Sbjct: 257 AYRRGTKAERTFWKRAIEDNVADDAGLEKATGLMTRHGAIADTIGRARHFGEIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L + K +L++V+DFC+ R+N Sbjct: 317 LEATPQKSALIDVIDFCISRVN 338 >gi|227821037|ref|YP_002825007.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234] gi|227340036|gb|ACP24254.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234] Length = 338 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L LT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 VKPLVGLTAADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 77 GDAHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYGMNLG+AFQLVDDVLDY G +++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVASASRADRNALKSYGMNLGLAFQLVDDVLDYGGSSSDLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT ++ FW+ I G NL KA ++R L DT RA YG A+D+L Sbjct: 257 SYRRGTPEDRAFWREAIEGGVTDAANLDKALGLIRRYGGLTDTIARAQHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S WK +L+EV+DFC+ R++ Sbjct: 317 LPASPWKSALVEVIDFCIDRVS 338 >gi|148559082|ref|YP_001258425.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840] gi|148370339|gb|ABQ60318.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840] Length = 328 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 183/322 (56%), Positives = 235/322 (72%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 7 VQPLVDLTRADMARVNELILSCAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 67 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 127 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 187 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSATDLGKNTGDDFREGKITLPVIL 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ F K I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 247 SYRRGTDEERAFCKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 306 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S K +L+EVVDFC+ R+N Sbjct: 307 LKASPQKDALIEVVDFCISRVN 328 >gi|222147711|ref|YP_002548668.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4] gi|221734699|gb|ACM35662.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4] Length = 338 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 183/322 (56%), Positives = 241/322 (74%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT ME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 17 VQPLVDLTRNGMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASAAMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GEGHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S EAL+ LS A +AEGE+ QLS++KN++ TE+DY VI++KTA LF+AA EV Sbjct: 137 MVEVGSLEALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYQAVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + R ALKSYGMNLG+AFQLVDD LDY G+V ++GKN G+DFR GK TLPVIL Sbjct: 197 PIVAGTDKAARNALKSYGMNLGLAFQLVDDALDYGGKVADLGKNTGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RG + E+ FW+ + G+ NL+KA ++ + L DT RA YG A+D+L Sbjct: 257 AYRRGNEAERGFWREALEGGRHDDANLEKAMGLITKYNGLSDTVARAIHYGDVARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 +PD WK +LM+V+DFC++R++ Sbjct: 317 VPDGVWKDALMDVIDFCIERVS 338 >gi|82395324|gb|ABB72030.1| decaprenyl diphosphate synthase [Sinorhizobium meliloti] Length = 338 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 184/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLTL DME+VN IL + SDV+MIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 VKPLVDLTLSDMERVNQPILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR WGNQ SVLVGDFLL QAF M Sbjct: 77 GDGHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTFWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL V ++KTA LF+AA EV Sbjct: 137 MVDVGSIDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLRVNRAKTAALFAAASEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + R ALKSYG NLG+AFQLVDDVLDY G +++GKN+G+DFR K TLPVIL Sbjct: 197 PIVAGGSKADRNALKSYGTNLGLAFQLVDDVLDYGGTSSDLGKNVGDDFRESKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT +++ FW+ I G NL+KA ++R L DT RA YG A+D+L Sbjct: 257 SYRRGTPQDRAFWREAIEGGASDAANLEKALGLIRRYGGLTDTIARAKHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S WK +L+EV+DFC+ R++ Sbjct: 317 LPASPWKSALVEVIDFCIDRVS 338 >gi|217977299|ref|YP_002361446.1| Polyprenyl synthetase [Methylocella silvestris BL2] gi|217502675|gb|ACK50084.1| Polyprenyl synthetase [Methylocella silvestris BL2] Length = 337 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 175/314 (55%), Positives = 228/314 (72%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLATA + YRG HV Sbjct: 22 LVSADMERVNQTILSRTASDVSMIPEVANHLISSGGKRLRPMLTLATAGLCNYRGAGHVK 81 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA ++EF+HTATLLHDDVVD+S +RRGK+AAR++WGN+ SVLVGDFLL QAF M++E S Sbjct: 82 LAASVEFMHTATLLHDDVVDESDMRRGKLAARMLWGNEASVLVGDFLLGQAFKMMVEVGS 141 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ LS A +AEGE+ QLS +K+ + +E+DYL VI++KTA LF AA EV L+AG Sbjct: 142 LPCLDVLSAAAAVIAEGEVMQLSAAKDTETSEDDYLAVIRAKTAALFGAAAEVGPLLAGR 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + A + YG+NLG+AFQL+DD LDY G ++GKN+G+DFR GK TLPV+L+F+RGT Sbjct: 202 PKAEIAACRGYGLNLGVAFQLIDDALDYGGASAKLGKNVGDDFREGKITLPVVLSFRRGT 261 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +++FW+ T+ G+I+ +L+ A M ++RAL DT RA YG A+D+L P S W Sbjct: 262 AEQRDFWRRTLERGEIADSDLEIAIATMHKHRALEDTVERARHYGAMARDALELFPASPW 321 Query: 307 KKSLMEVVDFCLQR 320 K +L VVDFC+ R Sbjct: 322 KFALSNVVDFCVSR 335 >gi|304393457|ref|ZP_07375385.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130] gi|303294464|gb|EFL88836.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130] Length = 338 Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 172/316 (54%), Positives = 233/316 (73%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT DM VN LIL + SDVEMIP+V K+LI SGGKRLRPMLTL+ A ML Y GD+HV Sbjct: 23 LTADDMAAVNTLILSKCGSDVEMIPEVAKHLIDSGGKRLRPMLTLSAARMLGYTGDHHVT 82 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA ++EF+HTATLLHDDVVD+S +RRGK +AR+VWGNQ SVLVGDFLL QAF M+++ S Sbjct: 83 LAASVEFMHTATLLHDDVVDESDMRRGKQSARMVWGNQASVLVGDFLLGQAFRMMVDAGS 142 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 EAL+ LS + +AEGE+ QLS +++++ TE+DY+ VI+ KTA LFSAA EV ++A Sbjct: 143 MEALDVLSTASMVIAEGEVMQLSAAQSMETTEDDYMAVIRGKTAALFSAACEVGPILADA 202 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 R AL+SYG+NLG+AFQLVDD LDY G ++GKN+G+DF GK TLPV+LA++RG+ Sbjct: 203 GKPARDALRSYGLNLGLAFQLVDDALDYGGSKADLGKNVGDDFHEGKITLPVLLAYRRGS 262 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E++FW++ + L A ++++++ A+ DT RA YG+ A+D+L LP Sbjct: 263 DEERDFWRTNMEADNAGEGALDDAMVLLKKHGAIDDTVARARHYGEMARDALAPLPAGEH 322 Query: 307 KKSLMEVVDFCLQRLN 322 K +L++VVDFC+ R++ Sbjct: 323 KSALLDVVDFCIARVS 338 >gi|150395683|ref|YP_001326150.1| polyprenyl synthetase [Sinorhizobium medicae WSM419] gi|150027198|gb|ABR59315.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419] Length = 338 Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 184/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 VKPLVDLTQSDMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 77 GDGHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAASEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYG NLG+AFQLVDDVLDY G +++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVASASKADRNALKSYGTNLGLAFQLVDDVLDYGGSSSDLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT +++ FW+ I G NL+KA ++ L DT RA YG A+D+L Sbjct: 257 SYRRGTPQDRAFWREAIEGGASDEANLEKALSLIHRYGGLTDTIARAKHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S K +L+EV+DFC+ R++ Sbjct: 317 LPVSPCKSALVEVIDFCIDRVS 338 >gi|146339069|ref|YP_001204117.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278] gi|146191875|emb|CAL75880.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278] Length = 336 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 178/314 (56%), Positives = 229/314 (72%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + EY GD HV Sbjct: 21 LVTADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMAHLTEYAGDGHVK 80 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EF+HTATLLHDDVVD+S +RRGK++AR++WGN+ SVLVGDFLL QAF M++E S Sbjct: 81 LAAAVEFMHTATLLHDDVVDESEMRRGKLSARMLWGNEASVLVGDFLLGQAFRMMVEVGS 140 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV ++A Sbjct: 141 LRALDILSAAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPVLADR 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + A +S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+RG+ Sbjct: 201 PKAEQTASRSFGMNLGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVLAFRRGS 260 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW ++ G+I+ +L A +M ++RAL DT RA+ YG A D+L P S Sbjct: 261 DSERAFWIKSLERGEINDSDLDHAIGLMNKHRALEDTISRAHHYGAMAVDALALFPASPM 320 Query: 307 KKSLMEVVDFCLQR 320 K +L +VV FCL R Sbjct: 321 KTALEQVVAFCLAR 334 >gi|148253842|ref|YP_001238427.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1] gi|146406015|gb|ABQ34521.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1] Length = 336 Score = 362 bits (928), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 178/314 (56%), Positives = 228/314 (72%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y GD HV Sbjct: 21 LVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMAHLTGYAGDGHVK 80 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EF+HTATLLHDDVVD+S +RRGK++AR++WGN+ SVLVGDFLL QAF M++E S Sbjct: 81 LAAAVEFMHTATLLHDDVVDESEMRRGKLSARMLWGNEASVLVGDFLLGQAFRMMVEVGS 140 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV ++A Sbjct: 141 LRALDILSAAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPVLADR 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + A +S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+RG+ Sbjct: 201 PKAEQTASRSFGMNLGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVLAFRRGS 260 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW ++ G+IS +L A +M ++RAL DT RA+ YG A D+L P S Sbjct: 261 DSERAFWIKSLERGEISDSDLDHAIGLMNKHRALEDTISRAHHYGAMAVDALALFPASPM 320 Query: 307 KKSLMEVVDFCLQR 320 K +L +VV FCL R Sbjct: 321 KTALEQVVAFCLAR 334 >gi|158422531|ref|YP_001523823.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571] gi|158329420|dbj|BAF86905.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571] Length = 335 Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 175/312 (56%), Positives = 226/312 (72%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DME+VN LIL R SDV MIP+V +LI SGGKRLRPMLT+A A + Y GD H+ LA + Sbjct: 24 DMERVNALILSRTGSDVAMIPEVANHLISSGGKRLRPMLTIACAALSSYEGDGHIKLAAS 83 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EF+HTATLLHDDVVD+S +RRGK+AAR +WGN+ SVLVGDFLL QAF M++E E L Sbjct: 84 VEFMHTATLLHDDVVDESDMRRGKLAARKLWGNEASVLVGDFLLGQAFKMMVEVGILECL 143 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS ACT+AEGE+ QL+ +KN + +E+DYL VI+ KTA LF+AA EV +++ + Sbjct: 144 DILSTAACTIAEGEVMQLAAAKNTETSEDDYLAVIRGKTAELFAAACEVGAVLNARPKAE 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + A +S+GMNLGIAFQLVDD LDY G ++GKN+G+DFR GK TLPV+LAF+RG E+ Sbjct: 204 QAACRSFGMNLGIAFQLVDDALDYGGSQAKLGKNVGDDFREGKITLPVLLAFRRGDAEER 263 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FWK + G+ + ENL A ++ ++RAL DT RA YG AKD+L P S K +L Sbjct: 264 AFWKRCLETGETTDENLAHAVGLLTKHRALADTIERARHYGAMAKDALALFPASHAKDAL 323 Query: 311 MEVVDFCLQRLN 322 E VDFC+ R + Sbjct: 324 AEAVDFCISRAH 335 >gi|182677848|ref|YP_001831994.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633731|gb|ACB94505.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 336 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 174/316 (55%), Positives = 228/316 (72%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y G+ H+ Sbjct: 21 LVTPDMERVNQTILSRAASDVTMIPEVANHLISSGGKRLRPMLTLAAAGLCGYGGNGHIK 80 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA ++EF+HTATLLHDDVVD+S +RRGK+AAR++WGN+ SVLVGDFLL QAF M++E S Sbjct: 81 LAASVEFMHTATLLHDDVVDESDMRRGKLAARMLWGNEASVLVGDFLLGQAFKMMVEVGS 140 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 LE LS A +AEGE+ QL+ +K+ + E+DYL VI++KTA LF AA EV +L+A Sbjct: 141 LACLEVLSTAAAVIAEGEVMQLAAAKDTETGEDDYLAVIRAKTAALFGAAAEVGALLAER 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + A +SYG+NLGIAFQL+DD LDY G ++GKN+G+DFR GK TLPV+L F+RGT Sbjct: 201 PKAEIAACRSYGLNLGIAFQLIDDALDYGGTSAKLGKNVGDDFREGKITLPVVLCFRRGT 260 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + E+ FW+ T+ G+I +L A MR++RA+ DT RA YG A+D+L P S W Sbjct: 261 QDERIFWRRTLEKGEIEEGDLDIAIATMRKHRAIEDTVERARHYGAMARDALELFPASPW 320 Query: 307 KKSLMEVVDFCLQRLN 322 K +L +VVDFC+ R++ Sbjct: 321 KIALNDVVDFCVNRIS 336 >gi|296447427|ref|ZP_06889352.1| Geranyltranstransferase [Methylosinus trichosporium OB3b] gi|296255047|gb|EFH02149.1| Geranyltranstransferase [Methylosinus trichosporium OB3b] Length = 338 Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 169/311 (54%), Positives = 228/311 (73%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 D+++VN LIL+R SDV IP+V +LI +GGKRLRPML LATA M YRGD H+ A Sbjct: 26 PDLQRVNQLILQRTGSDVTTIPEVANHLISAGGKRLRPMLVLATAGMCGYRGDGHIKFAA 85 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEF+HTATLLHDDVVD+S +RRGK+AAR++WGN+T VLVGDFLL AF M++E Sbjct: 86 GIEFMHTATLLHDDVVDESDMRRGKIAARMLWGNETCVLVGDFLLGHAFKMMVEPGVLPC 145 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L +S A +AEGE+ QL+ +K+ TE+ Y+ VI+SKTA LF+AA EV +++G + Sbjct: 146 LSVVSQAAAVIAEGEILQLNSAKDTQTTEDAYMAVIRSKTAELFAAAAEVGPMLSGRPKA 205 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A +SYGMNLGIAFQL+DD LDY G+ ++GKN+G+DFR GK TLPV+LAF+RG++ E Sbjct: 206 DEAACRSYGMNLGIAFQLIDDALDYGGQSAKLGKNVGDDFREGKITLPVVLAFRRGSENE 265 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW+ T+ G+I+ +++ A +M+++ AL DT RA YG A+D+L P S WK + Sbjct: 266 REFWRRTLEKGEIADGDVETACALMKKHDALKDTVERASHYGAIARDALEIFPASPWKSA 325 Query: 310 LMEVVDFCLQR 320 L+EVVDFC+QR Sbjct: 326 LLEVVDFCVQR 336 >gi|75676776|ref|YP_319197.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255] gi|74421646|gb|ABA05845.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255] Length = 336 Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 178/317 (56%), Positives = 226/317 (71%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y G+ Sbjct: 18 LVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLAGYAGEG 77 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA ++EF+HTATLLHDDVVD+S LRRG+++AR+VWGN+ SVLVGDFLL QAF M++E Sbjct: 78 HVKLAASVEFMHTATLLHDDVVDESELRRGRLSARMVWGNEASVLVGDFLLGQAFRMMVE 137 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV ++ Sbjct: 138 VGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPVL 197 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G + + A S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+ Sbjct: 198 GGRPKAEQTAAASFGMNLGIAFQLVDDVLDYGGKSAKLGKNVGDDFREGKITLPVVLAFR 257 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG E+ FW + GKI +L A +M ++RAL DT RA+ YG A D+L P Sbjct: 258 RGNDVEREFWVRALEQGKIGDNDLNHAIGLMTKHRALEDTLNRAHHYGAMAVDALALFPP 317 Query: 304 SSWKKSLMEVVDFCLQR 320 S K +L +VV FCL R Sbjct: 318 SPMKGALEQVVAFCLAR 334 >gi|85714244|ref|ZP_01045232.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] gi|85698691|gb|EAQ36560.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] Length = 336 Score = 358 bits (918), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 178/317 (56%), Positives = 225/317 (70%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y G+ Sbjct: 18 LVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLAGYSGEG 77 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA ++EF+HTATLLHDDVVD+S LRRGK++AR+VWGN+ SVLVGDFLL QAF M++E Sbjct: 78 HVKLAASVEFMHTATLLHDDVVDESELRRGKLSARMVWGNEASVLVGDFLLGQAFRMMVE 137 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV ++ Sbjct: 138 VGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPVL 197 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G + A S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+ Sbjct: 198 GGRPKAEETAAASFGMNLGIAFQLVDDVLDYGGKSAKLGKNVGDDFREGKITLPVVLAFR 257 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG E+ FW + +G+I +L A +M ++RAL DT RA YG A D+L P Sbjct: 258 RGNDVEREFWVRALEEGRIGDSDLNHAIGLMTKHRALEDTLNRAQHYGAMAVDALALFPP 317 Query: 304 SSWKKSLMEVVDFCLQR 320 S K +L +VV FCL R Sbjct: 318 SPMKSALEQVVAFCLMR 334 >gi|154245320|ref|YP_001416278.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2] gi|154159405|gb|ABS66621.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2] Length = 335 Score = 358 bits (918), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 175/316 (55%), Positives = 225/316 (71%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + YRGD HV Sbjct: 20 LVKADMERVNATILARTGSDVAMIPEVANHLISSGGKRLRPMLTLACASLSGYRGDGHVK 79 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGN+ SVLVGDFLL QAF M++E S Sbjct: 80 LAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNEASVLVGDFLLGQAFKMMVEVGS 139 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ L+ AC +AEGE+ QL+ +KN +E+DYL VI+ KTA LF+AA EV +++ Sbjct: 140 MTCLDILATAACVIAEGEVMQLAAAKNTATSEDDYLAVIRGKTAELFAAACEVGAVLGQR 199 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + A +SYGMNLGIAFQLVDD LDY G ++GKN+G+DFR GK TLPV+LAF+RG Sbjct: 200 PKAEQAACRSYGMNLGIAFQLVDDALDYGGSQAKLGKNVGDDFREGKITLPVLLAFRRGD 259 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW+ + G+ + +L +A +M +RA+ DT RA YG AKD+L P+ Sbjct: 260 ASERAFWQRCLEKGEGNDADLDQAIGLMTRHRAIADTVERARHYGAIAKDALALFPNGQA 319 Query: 307 KKSLMEVVDFCLQRLN 322 K +LME VDFCL R + Sbjct: 320 KDALMEAVDFCLSRAH 335 >gi|316932581|ref|YP_004107563.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1] gi|315600295|gb|ADU42830.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1] Length = 336 Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 176/317 (55%), Positives = 227/317 (71%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y GD Sbjct: 18 LVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYTGDG 77 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M++E Sbjct: 78 HIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRMMVE 137 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV I Sbjct: 138 VGSLRALDILSSASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPAI 197 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + A +S+GMN+GIAFQL+DDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+ Sbjct: 198 ANRPKPEQSACRSFGMNIGIAFQLIDDVLDYGGKAAKLGKNVGDDFREGKITLPVVLAFR 257 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG E+ FW ++ G+IS +L +A +M ++RAL DT RA+ YG A D+L P Sbjct: 258 RGNDAEREFWIKSLERGEISDADLDQAIKLMTKHRALEDTIQRAHHYGAMAVDALALFPS 317 Query: 304 SSWKKSLMEVVDFCLQR 320 S K +L +VV FCL R Sbjct: 318 SPMKTALEQVVAFCLAR 334 >gi|39934115|ref|NP_946391.1| farnesyltranstransferase [Rhodopseudomonas palustris CGA009] gi|192289642|ref|YP_001990247.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] gi|39647963|emb|CAE26483.1| octaprenyl-diphosphate synthase [Rhodopseudomonas palustris CGA009] gi|192283391|gb|ACE99771.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] Length = 336 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 176/317 (55%), Positives = 227/317 (71%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y GD Sbjct: 18 LVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYTGDG 77 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M++E Sbjct: 78 HIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRMMVE 137 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV I Sbjct: 138 VGSLRALDILSSASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPAI 197 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + A +S+GMN+GIAFQL+DDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+ Sbjct: 198 ANRPKPEQSACRSFGMNIGIAFQLIDDVLDYGGKAAKLGKNVGDDFREGKITLPVVLAFR 257 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG E+ FW ++ G+IS +L +A +M ++RAL DT RA+ YG A D+L P Sbjct: 258 RGNDAEREFWIKSLERGEISDADLDQAIKLMTKHRALDDTIQRAHHYGAMAVDALALFPS 317 Query: 304 SSWKKSLMEVVDFCLQR 320 S K +L +VV FCL R Sbjct: 318 SPMKTALEQVVAFCLAR 334 >gi|90425826|ref|YP_534196.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB18] gi|90107840|gb|ABD89877.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB18] Length = 336 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 176/317 (55%), Positives = 228/317 (71%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L +L DME+VN +IL R S+V MIP+V +LI SGGKRLRP LTLA A + Y G+ Sbjct: 18 LVELVAADMERVNAVILSRTGSEVTMIPEVANHLISSGGKRLRPNLTLAMAQLTGYSGEG 77 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M++E Sbjct: 78 HIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRMMVE 137 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV I Sbjct: 138 VGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPAI 197 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + + A +S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+ Sbjct: 198 AGRPKAEQSACRSFGMNLGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVLAFR 257 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG E+ FW + G+I+ +L +A +M ++RAL DT RA+ YG A D+L P Sbjct: 258 RGNDAERAFWIKALERGEITEPDLDQAIGLMTKHRALEDTIQRAHHYGAMAVDALALFPT 317 Query: 304 SSWKKSLMEVVDFCLQR 320 S K +L +VV FCL R Sbjct: 318 SPMKAALEQVVAFCLAR 334 >gi|92118681|ref|YP_578410.1| farnesyltranstransferase [Nitrobacter hamburgensis X14] gi|91801575|gb|ABE63950.1| Farnesyltranstransferase [Nitrobacter hamburgensis X14] Length = 336 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 177/315 (56%), Positives = 223/315 (70%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y G+ H+ Sbjct: 20 ELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMAHLAGYSGEGHI 79 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA ++EF+HTATLLHDDVVD+S LRRGK++AR+VWGN+ SVLVGDFLL QAF M++E Sbjct: 80 KLAASVEFMHTATLLHDDVVDESELRRGKLSARMVWGNEASVLVGDFLLGQAFRMMVEVG 139 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV ++ G Sbjct: 140 SLRALDILSAAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPVLGG 199 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + A S+GMNLGIAFQLVDDVLDY G+ ++GKNIG+DFR GK TLPV+LAF+RG Sbjct: 200 RPKAEEMAAASFGMNLGIAFQLVDDVLDYGGKSAKLGKNIGDDFREGKITLPVVLAFRRG 259 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 E+ FW + G+I +L A +M ++RAL DT RA YG A D+L P S Sbjct: 260 NDIEREFWVRALEQGEIGDNDLNHAIGLMTKHRALEDTLNRAQHYGAMAVDALALFPPSP 319 Query: 306 WKKSLMEVVDFCLQR 320 K +L +VV FCL R Sbjct: 320 MKSALEQVVAFCLAR 334 >gi|86748213|ref|YP_484709.1| farnesyltranstransferase [Rhodopseudomonas palustris HaA2] gi|86571241|gb|ABD05798.1| Farnesyltranstransferase [Rhodopseudomonas palustris HaA2] Length = 336 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 175/314 (55%), Positives = 225/314 (71%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y GD H+ Sbjct: 21 LVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYAGDGHIK 80 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M++E S Sbjct: 81 LAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRMMVEVGS 140 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV IA Sbjct: 141 LRALDILSAASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPAIADR 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + A +S+GMN+GIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+RG Sbjct: 201 PKAEQSACRSFGMNIGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVLAFRRGN 260 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW + G+I+ +L +A +M ++RAL DT RA+ YG A D+L P S Sbjct: 261 DSERAFWIKALERGEITEADLDQAIKLMTKHRALEDTIQRAHHYGAMAVDALALFPSSPM 320 Query: 307 KKSLMEVVDFCLQR 320 K +L +VV FCL R Sbjct: 321 KTALEQVVAFCLAR 334 >gi|319406067|emb|CBI79697.1| octaprenyl-diphosphate synthase [Bartonella sp. AR 15-3] Length = 337 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 168/316 (53%), Positives = 230/316 (72%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT +DM++VN LI+ S+V MIP++ YLI SGGKR+RPM+TLATA M EY+GD H+ Sbjct: 22 LTKEDMKRVNQLIISMAKSNVTMIPEISNYLISSGGKRIRPMITLATAHMFEYQGDEHIK 81 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ S+LVGDFLL QAF M+++ S Sbjct: 82 LATAVEFMHTATLLHDDVVDESELRRGKSTARILWGNQASILVGDFLLGQAFKMMVDVGS 141 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 EAL LS A +AEGE+ QLS +KN++ DYL +IK+KTA LFSAA E+ +IAG Sbjct: 142 LEALSVLSNAAAIIAEGEVMQLSAAKNIETNVSDYLKIIKAKTAALFSAAAEIGPIIAGY 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + R AL YG++LG+AFQL+DDVLDY +GKNIG+DFR GK T+PVIL++ RG Sbjct: 202 GHEERSALHQYGLSLGLAFQLIDDVLDYSSNTQYLGKNIGDDFREGKITMPVILSYTRGN 261 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 EK FWK + + + E+LK A ++ + L+DT +A YG++A D+L + ++ Sbjct: 262 DTEKTFWKQALENNHNNDESLKHAQHLIEKYNGLIDTIEQARIYGKRAIDALSSIKENPA 321 Query: 307 KKSLMEVVDFCLQRLN 322 K +L++++DFC++R+N Sbjct: 322 KNALIDIIDFCIERVN 337 >gi|299134682|ref|ZP_07027874.1| Polyprenyl synthetase [Afipia sp. 1NLS2] gi|298590492|gb|EFI50695.1| Polyprenyl synthetase [Afipia sp. 1NLS2] Length = 336 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 176/316 (55%), Positives = 226/316 (71%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN IL R S+V MIP+V +LI SGGKRLRPMLTLA A + Y GD H+ Sbjct: 21 LVADDMAGVNTTILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAQLAGYTGDGHIK 80 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EF+HTATLLHDDVVD+S LRRGK++AR++WGN+ SVLVGDFLL QAF M++E S Sbjct: 81 LAAAVEFMHTATLLHDDVVDESELRRGKLSARMLWGNEASVLVGDFLLGQAFRMMVEVGS 140 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV +IA Sbjct: 141 LRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAASEVGPVIANR 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + A +S+GMNLGIAFQL+DDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+RG Sbjct: 201 PKAEQTASRSFGMNLGIAFQLIDDVLDYGGKAAKLGKNVGDDFREGKITLPVVLAFRRGN 260 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E++FW T+ G+++ +L A +M ++RAL DT RA YG A D+L P S Sbjct: 261 DVERDFWIRTLERGEVADADLDHAIGLMTKHRALDDTMQRAQHYGAMAVDALALFPSSPM 320 Query: 307 KKSLMEVVDFCLQRLN 322 K +L +VV FCL R N Sbjct: 321 KSALEQVVAFCLARSN 336 >gi|298293858|ref|YP_003695797.1| trans-hexaprenyltranstransferase [Starkeya novella DSM 506] gi|296930369|gb|ADH91178.1| Trans-hexaprenyltranstransferase [Starkeya novella DSM 506] Length = 340 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 171/315 (54%), Positives = 229/315 (72%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM++VN LIL R SDV MIP+V ++LI SGGKRLRPMLTLATA + Y GD V Sbjct: 25 LVRADMDRVNALILSRTGSDVTMIPEVAQHLISSGGKRLRPMLTLATAALSGYEGDGAVK 84 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA ++EF+HTATLLHDDVVDDS +RRGK+AAR++WGN+ SVLVGDFLL QAF M+IE S Sbjct: 85 LAASVEFMHTATLLHDDVVDDSEMRRGKLAARMLWGNEASVLVGDFLLGQAFRMMIEVGS 144 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL+ LS A +AEGE+ QL+ +KN+ E+ YL VI+ KTA LF+AA EV ++AG Sbjct: 145 MRALDILSTAAVVIAEGEVAQLAAAKNIATDEDAYLAVIRGKTAELFAAACEVGPVLAGR 204 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + A ++YGMNLGIAFQLVDD LDY G ++GKN+G+DFR GK TLP++LA +R Sbjct: 205 PEAEMAAARAYGMNLGIAFQLVDDALDYGGSGADLGKNVGDDFREGKITLPIVLAVRRAN 264 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + E+ FW+ + +G+I +L++A ++ + AL +T RA YG++AK +L LP + Sbjct: 265 EDERGFWRRCLEEGEIGEGDLERALALLTRHGALAETVERARFYGEEAKAALVALPAGTA 324 Query: 307 KKSLMEVVDFCLQRL 321 K +L++VVDFC+ R+ Sbjct: 325 KSALIDVVDFCISRV 339 >gi|91975694|ref|YP_568353.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB5] gi|91682150|gb|ABE38452.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB5] Length = 336 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 174/314 (55%), Positives = 225/314 (71%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + Y GD H+ Sbjct: 21 LVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPILTLAMANLTGYAGDGHIK 80 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M++E S Sbjct: 81 LAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRMMVEVGS 140 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV IA Sbjct: 141 LRALDILSAASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPTIADR 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + A +S+GMN+GIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+RG Sbjct: 201 PKAEQSACRSFGMNIGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVLAFRRGN 260 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW + G+I+ +L +A +M ++RAL DT RA+ YG A D+L P S Sbjct: 261 DAERAFWIKALERGEITETDLDQAIALMAKHRALEDTIQRAHHYGAMAVDALALFPSSPM 320 Query: 307 KKSLMEVVDFCLQR 320 K +L +VV FCL R Sbjct: 321 KTALEQVVAFCLAR 334 >gi|110633068|ref|YP_673276.1| polyprenyl synthetase [Mesorhizobium sp. BNC1] gi|110284052|gb|ABG62111.1| Polyprenyl synthetase [Chelativorans sp. BNC1] Length = 338 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 171/316 (54%), Positives = 231/316 (73%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT DM +VN LIL + SDVE+IP + ++LI SGGKRLRPM+TLA A M Y G+ HV Sbjct: 23 LTKDDMARVNDLILSKAGSDVELIPQLARHLISSGGKRLRPMITLAAAQMFGYSGEGHVK 82 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA ++EF+HTATLLHDDVVD+S +RRGK AR +WGNQ SVLVGD+LL QAF M+++ S Sbjct: 83 LATSVEFMHTATLLHDDVVDESDMRRGKKTARTIWGNQASVLVGDYLLGQAFRMMVDVGS 142 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 EAL+ LS A +AEGE+ QL +SKNL+ TE++YL VIK+KTA LFSAA EV +IA Sbjct: 143 LEALDVLSSAASIIAEGEVMQLGVSKNLETTEDEYLSVIKAKTAALFSAAAEVGPIIAEA 202 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + R AL+S+G+NLG+AFQLVDD LDY G ++GKN+G+DFR GK TLPVIL+++RG+ Sbjct: 203 SRNDRAALRSFGINLGLAFQLVDDALDYGGSSRDLGKNVGDDFREGKVTLPVILSYRRGS 262 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + E+ FWK I + + + L KA +M + ++ DT RA +G+ A+D+L L + Sbjct: 263 EEERLFWKRAIEENQNDDDALAKAIGLMNRHGSIGDTIARARHFGEIARDALAPLKSTPQ 322 Query: 307 KKSLMEVVDFCLQRLN 322 K +L +V+DFC+ R++ Sbjct: 323 KAALFDVIDFCISRVS 338 >gi|209886074|ref|YP_002289931.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5] gi|209874270|gb|ACI94066.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5] Length = 336 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 178/319 (55%), Positives = 226/319 (70%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L L DM VN IL R S+V MIP+V +LI SGGKRLRPMLTLA A + Y GD Sbjct: 18 LVSLVADDMAGVNTTILARTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAQLAGYVGDG 77 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA A+EF+HTATLLHDDVVD+S LRRGK++AR++WGN+ SVLVGDFLL QAF M++E Sbjct: 78 HIKLAAAVEFMHTATLLHDDVVDESELRRGKLSARMLWGNEASVLVGDFLLGQAFRMMVE 137 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV +I Sbjct: 138 VGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPVI 197 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + + A ++ GMNLGIAFQLVDDVLDY G ++GKN+G+DFR GK TLPV+LAF+ Sbjct: 198 AERPKAEQTACRAVGMNLGIAFQLVDDVLDYGGTAAKLGKNVGDDFREGKITLPVVLAFR 257 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG E++FW T+ G+++ +L A +M ++RAL DT RA YG KA D+L P Sbjct: 258 RGNDVERDFWIRTLERGEVADADLDHAIGLMAKHRALEDTMQRAEHYGAKAVDALALFPS 317 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S K +L +VV FCL R N Sbjct: 318 SPMKSALEQVVAFCLARSN 336 >gi|163867858|ref|YP_001609062.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476] gi|161017509|emb|CAK01067.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476] Length = 338 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 168/322 (52%), Positives = 227/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT KDME+VN IL S++EMIP++ +LI SGGKRLRPM+TLA+A M Y+ Sbjct: 17 LQSLFDLTQKDMERVNQFILSMAKSEIEMIPEISNHLISSGGKRLRPMITLASAHMFGYQ 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H+ LA A+EF+HTATLLHDDV+D+S LRRGK AR++WGNQ S+LVGDFLL QAF M Sbjct: 77 SDGHIKLATAVEFMHTATLLHDDVIDESDLRRGKSTARMIWGNQASILVGDFLLGQAFKM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL L+ A +AEGE+ QLS +KN+ + DYL +I +KTA LFSAA EV Sbjct: 137 MVDVGSIEALSVLANAAAIIAEGEVMQLSAAKNIKTSSSDYLKIINAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + R AL+ YG +LG+AFQL+DD LDY G +GKNIG+DFR GK T+PVIL Sbjct: 197 PIVAGYGHKERSALREYGTSLGLAFQLIDDALDYSGSAQNLGKNIGDDFREGKITMPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RG EK FWK + DG S E A +M + ++ DT +A YG++A D+L Sbjct: 257 AYERGNMDEKAFWKQALEDGNNSNEAFAHAQHLMEKYNSITDTIEQARVYGKRAIDALIP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + ++ +L+E V+FC+ R+N Sbjct: 317 MNENPAYNALVETVEFCIARIN 338 >gi|170740966|ref|YP_001769621.1| polyprenyl synthetase [Methylobacterium sp. 4-46] gi|168195240|gb|ACA17187.1| Polyprenyl synthetase [Methylobacterium sp. 4-46] Length = 345 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 175/320 (54%), Positives = 226/320 (70%), Gaps = 6/320 (1%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----- 61 L ME+VN +IL R SDV MIP+V +LI SGGKRLRP+LTLATA + YR Sbjct: 24 LVASGMERVNAMILSRTGSDVAMIPEVANHLIASGGKRLRPILTLATAQLCGYRAGEAGR 83 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D V LA ++EF+HTATLLHDDVVD+S +RRG+VAAR+ WGNQ SVLVGDFLL QAF M+ Sbjct: 84 DGDVKLAASVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNQASVLVGDFLLGQAFKMM 143 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S AL+ LS A +AEGE+ QL +KN + TE++YL VI++KTA LF+AA EV Sbjct: 144 VEVGSLRALDILSSAAAVIAEGEVMQLGAAKNTETTEDEYLAVIRAKTAELFAAACEVGP 203 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A S A +SYGMNLG+AFQL+DD LDY G +GKN+G+DFR GK TLPV+L+ Sbjct: 204 VLAERPKSEAAACRSYGMNLGVAFQLIDDALDYGGTSAALGKNVGDDFREGKITLPVVLS 263 Query: 242 FQRGTKREKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 F+RG+ E+ FW+ T+ G+I +L A IMR +RAL DT RA YG A+D+L Sbjct: 264 FRRGSAEERAFWRRTLEQGEIDEARDLDTAIGIMRRHRALEDTVERARHYGAIARDALAL 323 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PD+ K++L++ VDFC+ R Sbjct: 324 FPDAPMKRALLQAVDFCIAR 343 >gi|27377642|ref|NP_769171.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110] gi|27350787|dbj|BAC47796.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110] Length = 335 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 176/314 (56%), Positives = 222/314 (70%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y GD H+ Sbjct: 20 LVAGDMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLAGYTGDGHIK 79 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA ++EF+HTATLLHDDVVD+S +RRGK++AR++WGN+ SVLVGDFLL QAF M++E S Sbjct: 80 LAASVEFMHTATLLHDDVVDESEMRRGKLSARMLWGNEASVLVGDFLLGQAFRMMVEVGS 139 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV +IA Sbjct: 140 LRALDILSAAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPVIANR 199 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + A +S GMNLGIAFQLVDDVLDY G+ ++GKN G+DFR GK TLPV+LAF+RG Sbjct: 200 PKAEQTACRSVGMNLGIAFQLVDDVLDYGGKSAKLGKNTGDDFREGKITLPVVLAFRRGN 259 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW + G+I +L A +M ++RAL DT RA YG A D+L P S Sbjct: 260 DTERAFWIKALERGEIGDTDLDHAIGLMNKHRALEDTLSRAQHYGAMAVDALALFPSSPM 319 Query: 307 KKSLMEVVDFCLQR 320 K +L +VV FCL R Sbjct: 320 KSALEQVVAFCLAR 333 >gi|115526409|ref|YP_783320.1| farnesyltranstransferase [Rhodopseudomonas palustris BisA53] gi|115520356|gb|ABJ08340.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisA53] Length = 341 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 174/317 (54%), Positives = 227/317 (71%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L +L DM++VN IL R S+V MIP+V +LI SGGKRLRPMLTLA A + Y GD Sbjct: 23 LVELVAADMKRVNATILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYTGDG 82 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M++E Sbjct: 83 HIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRMMVE 142 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV I Sbjct: 143 VGSLRALDILSAASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPAI 202 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + A +S+GMN+GIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+ Sbjct: 203 AERPKPEQSACRSFGMNIGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVLAFR 262 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG E+ FW ++ G+I+ +L +A +M ++RAL DT RA+ YG A D+L P Sbjct: 263 RGNDSERAFWIKSLERGEITDTDLDQAIGLMTKHRALEDTIQRAHHYGAMAVDALALFPQ 322 Query: 304 SSWKKSLMEVVDFCLQR 320 S K +L +VV FCL R Sbjct: 323 SPMKTALEQVVAFCLAR 339 >gi|323136700|ref|ZP_08071781.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242] gi|322398017|gb|EFY00538.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242] Length = 336 Score = 351 bits (900), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 165/311 (53%), Positives = 226/311 (72%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+E+ N LI++R SDV IP+V +LI +GGKRLRPML LATA M Y+GD H+ A Sbjct: 25 DLERTNQLIIQRTGSDVTTIPEVANHLISAGGKRLRPMLVLATAGMCGYKGDGHLKFAAG 84 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD+S +RRGK+AAR++WGNQT VLVGDFLL AF M++E L Sbjct: 85 IEFMHTATLLHDDVVDESNMRRGKIAARMLWGNQTCVLVGDFLLGHAFKMMVEPGMVPPL 144 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +S A +AEGE+ QL+ +K+ TE+ Y+ VI+ KTA LF+AA EV ++A + Sbjct: 145 TVVSQAAAVIAEGEILQLNAAKDTTTTEDAYMAVIRRKTAELFAAAAEVGVMLANKPKAD 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A +SYGMNLGIAFQL+DD LDY G ++GKN+G+DFR GK TLPV+LAF+RG ++E+ Sbjct: 205 EAAARSYGMNLGIAFQLIDDALDYGGSSAKLGKNVGDDFREGKITLPVVLAFRRGNEKER 264 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FW+ T+ G+I+ +++ A +M++++AL DT RA YG A+D++ P S WK +L Sbjct: 265 EFWRRTLEKGEINDGDVETACGLMKKHKALDDTIERAAHYGAIARDAMEIFPASPWKSAL 324 Query: 311 MEVVDFCLQRL 321 +EVVDFC++R+ Sbjct: 325 LEVVDFCIERV 335 >gi|220924250|ref|YP_002499552.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060] gi|219948857|gb|ACL59249.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060] Length = 345 Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 175/315 (55%), Positives = 224/315 (71%), Gaps = 6/315 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-----DNHVL 66 ME+VN +IL R SDV MIP+V +LI SGGKRLRP+LTLATA + YR D V Sbjct: 29 MERVNAMILSRTGSDVAMIPEVANHLIASGGKRLRPILTLATAQLCGYRSAEGGRDGDVK 88 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA ++EF+HTATLLHDDVVD+S +RRG+VAAR+ WGNQ SVLVGDFLL QAF M++E S Sbjct: 89 LAASVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNQASVLVGDFLLGQAFKMMVEVGS 148 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL+ LS A +AEGE+ QL +KN + TE++YL VI++KTA LF+AA EV ++A Sbjct: 149 LRALDILSSAAAVIAEGEVMQLGAAKNTETTEDEYLAVIRAKTAELFAAACEVGPVLAER 208 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 S A +SYGMNLGIAFQLVDD LDY G +GKN+G+DFR GK TLP++L+F+RG Sbjct: 209 PKSEAAACRSYGMNLGIAFQLVDDALDYGGTSAALGKNVGDDFREGKITLPIVLSFRRGN 268 Query: 247 KREKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 E+ FW+ T+ G+I +L A IMR +RAL DT RA YG A+D+L PD+ Sbjct: 269 AEERAFWRRTLEQGEIDESRDLDTAIGIMRRHRALEDTIERARHYGAIARDALALFPDAP 328 Query: 306 WKKSLMEVVDFCLQR 320 K++L++ VDFC+ R Sbjct: 329 MKRALLQAVDFCISR 343 >gi|46203612|ref|ZP_00051268.2| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum magnetotacticum MS-1] Length = 312 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 171/312 (54%), Positives = 229/312 (73%), Gaps = 1/312 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACA 70 ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + Y GD V LA A Sbjct: 1 MERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCGYGDGDGAVKLAAA 60 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF M++E S AL Sbjct: 61 VEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFRMMVEVGSLRAL 120 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS A +AEGE+ QL+ +KN + +E++YL VI+ KTA LF+AA EV ++AG + Sbjct: 121 DILSAAATVIAEGEVMQLTAAKNTETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPEAE 180 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++LA +RGT E+ Sbjct: 181 QVACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIVLALRRGTDEER 240 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FW+ T+ ++ +L++A I+R NRAL DT RA+ YG A+++L LP+ + K +L Sbjct: 241 AFWRRTLEREELEDGDLEQALAILRRNRALEDTITRAHHYGTMAREALAPLPNGAMKSAL 300 Query: 311 MEVVDFCLQRLN 322 ++VVDFC+ R + Sbjct: 301 LQVVDFCIARAH 312 >gi|319404558|emb|CBI78164.1| octaprenyl-diphosphate synthase [Bartonella rochalimae ATCC BAA-1498] Length = 337 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 168/316 (53%), Positives = 223/316 (70%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT +DME VN L + S+V MIP++ YLI SGGKR+RPM+TLATA M Y+GD H+ Sbjct: 22 LTKEDMECVNQLTISMAKSNVAMIPEISNYLISSGGKRIRPMITLATAHMFGYQGDKHIK 81 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EF+HTATLLHDDVVD+SALRRGK AR++WGNQ S+LVGDFLL QAF M+++ S Sbjct: 82 LATAVEFMHTATLLHDDVVDESALRRGKSTARIIWGNQASILVGDFLLGQAFKMMVDVGS 141 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +AL LS A +AEGE+ QLS +KN++ DYL +I +KTA LFSAA EV +IAG Sbjct: 142 LDALSVLSNAAAIIAEGEVMQLSAAKNIETNVSDYLKIINAKTAALFSAAAEVGPIIAGY 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 R AL YG++LG+AFQL+DDVLDY +GKNIG+DFR GK T+PVIL++ RG Sbjct: 202 GPEERSALHQYGLSLGLAFQLIDDVLDYSSSAQYLGKNIGDDFREGKITMPVILSYTRGN 261 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 EK FWK + + E LK A ++ + L DT +A YG++A D+L + D+ Sbjct: 262 DIEKIFWKQALENNHNDDEALKHAQQLIEKYDGLTDTIEQARIYGKRAIDALSSIKDNPA 321 Query: 307 KKSLMEVVDFCLQRLN 322 K +L++++DFC++R+N Sbjct: 322 KNALIDIIDFCIERVN 337 >gi|240139858|ref|YP_002964335.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1] gi|240009832|gb|ACS41058.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1] Length = 340 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 169/317 (53%), Positives = 227/317 (71%), Gaps = 1/317 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65 L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + +Y GD V Sbjct: 24 LVAAGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCDYGSGDGAV 83 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF M++E Sbjct: 84 KLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFRMMVEVG 143 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S AL+ LS A +AEGE+ QL+ +KN++ +E++YL VI+ KTA LF+AA EV ++AG Sbjct: 144 SLRALDILSAAATVIAEGEVMQLTAAKNIETSEDEYLAVIRGKTAELFAAACEVGPVLAG 203 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 S + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++LA +RG Sbjct: 204 RPESEQAACRAYGMNLGIAFQLIDDVLDYGGSSAALGKNVGDDFREGKITLPIVLALRRG 263 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + E+ FW+ T+ + +L++A I+ +RAL DT RA+ YG +A+ +L P Sbjct: 264 SDEERAFWRRTLEREDRAEGDLQQALAILSRHRALDDTIERAHHYGDQARAALEPFPPGP 323 Query: 306 WKKSLMEVVDFCLQRLN 322 K +L++VVDFC+ R + Sbjct: 324 MKAALLQVVDFCIARAH 340 >gi|319408199|emb|CBI81852.1| octaprenyl-diphosphate synthase [Bartonella schoenbuchensis R1] Length = 338 Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 170/321 (52%), Positives = 229/321 (71%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + L +LT +ME+VN LI+ + +DVEMIP++ YLI SGGKRLRPM+TLA A M Y+G Sbjct: 18 QTLINLTKDNMERVNQLIISMVQADVEMIPEICNYLISSGGKRLRPMITLAAADMFGYQG 77 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H+ LA AIEF+HTATLLHDDVVD+S LRRGK AR++WGN+ SVLVGDFLL QAF M+ Sbjct: 78 DGHIKLATAIEFMHTATLLHDDVVDESNLRRGKSTARMIWGNKASVLVGDFLLGQAFKMI 137 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++ S EAL L+ A +AEGE+ QL+ ++N++ T DYL +I +KTA LFSAA EV Sbjct: 138 VDVGSMEALTILANAAAIIAEGEVMQLAAAQNIETTASDYLKIINAKTAALFSAAAEVGP 197 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IAG + R AL+ YG +LG+AFQLVDD LDY G +GKNIG+DFR GK T+PVIL+ Sbjct: 198 IIAGYGHEERLALREYGTSLGLAFQLVDDALDYSGNAEHLGKNIGDDFREGKITMPVILS 257 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + RG EK FWK + + + E+L A +M + +L DT +A YG++A D+L + Sbjct: 258 YTRGNATEKAFWKQALENNNNNDESLVHAQHLMEKYDSLTDTIEQARIYGKQAIDALSPI 317 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 ++ K + +E+VDFC+ R+N Sbjct: 318 KENPQKNAFIEIVDFCIARIN 338 >gi|254562277|ref|YP_003069372.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4] gi|254269555|emb|CAX25521.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4] Length = 340 Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 169/317 (53%), Positives = 227/317 (71%), Gaps = 1/317 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65 L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + +Y GD V Sbjct: 24 LVAAGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCDYGSGDGAV 83 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF M++E Sbjct: 84 KLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFRMMVEVG 143 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S AL+ LS A +AEGE+ QL+ +KN++ +E++YL VI+ KTA LF+AA EV ++AG Sbjct: 144 SLRALDILSAAATVIAEGEVMQLTAAKNIETSEDEYLAVIRGKTAELFAAACEVGPVLAG 203 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 S + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++LA +RG Sbjct: 204 RPESEQAACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIVLALRRG 263 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + E+ FW+ T+ + +L++A I+ +RAL DT RA+ YG +A+ +L P Sbjct: 264 SDEERAFWRRTLEREDRAEGDLQQALAILSRHRALDDTIERAHHYGDQARAALEPFPQGP 323 Query: 306 WKKSLMEVVDFCLQRLN 322 K +L++VVDFC+ R + Sbjct: 324 MKAALLQVVDFCIARAH 340 >gi|319899203|ref|YP_004159296.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73] gi|319403167|emb|CBI76726.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73] Length = 338 Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 164/317 (51%), Positives = 225/317 (70%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT DME +N LI+ S+VEMIP++ +LI SGGKR+RPM+TLA A M Y+GD H+ Sbjct: 22 NLTKGDMESINQLIISMAKSNVEMIPEISNHLISSGGKRIRPMITLAAAHMFGYQGDKHI 81 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M+++ Sbjct: 82 KLATAVEFMHTATLLHDDVVDESELRRGKSTARMIWGNQASVLVGDFLLGQAFKMMVDVG 141 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S EAL L+ A +AEGE+ QLS +KN++ +YL +I +KTA LFSAA EV +IAG Sbjct: 142 SLEALSVLANAAAIIAEGEVMQLSAAKNIETNVSNYLKIINAKTAALFSAAAEVGPIIAG 201 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + R AL YG++LG+AFQL+DDVLDY +GKNIG+DFR GK T+PVIL++ R Sbjct: 202 YGHEERSALHQYGLSLGVAFQLIDDVLDYSSSAQYLGKNIGDDFREGKITMPVILSYTRS 261 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 EK FWK + + + E LK A ++ + L+DT +A YG++A D+L + ++ Sbjct: 262 NDIEKTFWKQALENNHNNDEALKHAQQLIEKYDGLIDTIEQARIYGKRAIDALSSIKENP 321 Query: 306 WKKSLMEVVDFCLQRLN 322 K +L++++DFC++R+N Sbjct: 322 AKNALIDIIDFCIERVN 338 >gi|240850066|ref|YP_002971459.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup] gi|240267189|gb|ACS50777.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup] Length = 358 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 166/322 (51%), Positives = 227/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L +LT KDME+VN IL S+VEMIP++ +LI SGGKRLRPM+TLA+A M Y+ Sbjct: 37 LQSLVNLTQKDMERVNQFILSMAKSEVEMIPEISNHLISSGGKRLRPMITLASAHMFGYQ 96 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H+ LA A+EF+HTATLLHDDV+D+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 97 SDGHIKLATAVEFMHTATLLHDDVIDESNLRRGKSTARMIWGNQASVLVGDFLLGQAFKM 156 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL L+ A +AEGE+ QLS +KN+ + DYL +I +KTA LFSAA EV Sbjct: 157 MVDVGSIEALSVLANAAAIIAEGEVMQLSAAKNIKTSPSDYLKIINAKTAALFSAAAEVG 216 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + R +L+ YG +LG+AFQL+DD LDY G +GKNIG+DFR GK T+PVI+ Sbjct: 217 PIVAGYGHKERSSLREYGTSLGLAFQLIDDALDYSGSAQNLGKNIGDDFREGKITMPVII 276 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RG EKNFWK + DG + E A ++ + ++ DT +A YG+ A D+L Sbjct: 277 AYERGNIVEKNFWKQALEDGNNNNEAFAYAQHLIEKYDSITDTIEQARIYGKHAIDALIP 336 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + ++ +L+E V+FC+ R+N Sbjct: 337 MNENLAYNALVETVEFCIARVN 358 >gi|163852524|ref|YP_001640567.1| polyprenyl synthetase [Methylobacterium extorquens PA1] gi|163664129|gb|ABY31496.1| Polyprenyl synthetase [Methylobacterium extorquens PA1] Length = 340 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 169/317 (53%), Positives = 227/317 (71%), Gaps = 1/317 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65 L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + +Y GD V Sbjct: 24 LVAAGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCDYGSGDGAV 83 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF M++E Sbjct: 84 KLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFRMMVEVG 143 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S AL+ LS A +AEGE+ QL+ +KN++ +E++YL VI+ KTA LF+AA EV ++AG Sbjct: 144 SLRALDILSAAATVIAEGEVMQLTAAKNIETSEDEYLAVIRGKTAELFAAACEVGPVLAG 203 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 S + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++LA +RG Sbjct: 204 RPESEQAACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIVLALRRG 263 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + E+ FW+ T+ + +L++A I+ +RAL DT RA+ YG +A+ +L P Sbjct: 264 SDEERAFWRRTLEREDRAEGDLQEALAILSRHRALDDTIERAHHYGDQARAALEPFPQGP 323 Query: 306 WKKSLMEVVDFCLQRLN 322 K +L++VVDFC+ R + Sbjct: 324 MKAALLQVVDFCIARAH 340 >gi|319407551|emb|CBI81201.1| octaprenyl-diphosphate synthase [Bartonella sp. 1-1C] Length = 337 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 167/316 (52%), Positives = 223/316 (70%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT +DME VN LI+ S+V +IP++ YLI SGGKR+RPM+TLATA M Y+GD H+ Sbjct: 22 LTKEDMECVNQLIISMAQSNVAIIPEISNYLISSGGKRIRPMITLATAHMFGYQGDKHIK 81 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ S+LVGDFLL QAF M+++ S Sbjct: 82 LATAVEFMHTATLLHDDVVDESELRRGKSTARIIWGNQASILVGDFLLGQAFKMMVDVGS 141 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +AL LS A +AEGE+ QLS +KN++ DYL +I +KTA LFSAA EV +IAG Sbjct: 142 LDALSVLSNAAAIIAEGEIMQLSAAKNIETNVSDYLKIINAKTAALFSAAAEVGPIIAGY 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 R AL YG++LG+AFQL+DDVLDY +GKNIG+DFR GK T+PVIL++ RG Sbjct: 202 GPEERSALHQYGLSLGLAFQLIDDVLDYSSSAQYLGKNIGDDFREGKITMPVILSYTRGN 261 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 EK FWK + + E LK A ++ + L DT +A YG++A D+L + D+ Sbjct: 262 DIEKIFWKQALENNHNDDEALKHAQQLIEKYDGLTDTIEQARIYGKRAIDALSSIKDNPA 321 Query: 307 KKSLMEVVDFCLQRLN 322 K +L++++DFC++R+N Sbjct: 322 KNALIDIIDFCIERIN 337 >gi|218531359|ref|YP_002422175.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4] gi|218523662|gb|ACK84247.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4] Length = 340 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 170/320 (53%), Positives = 227/320 (70%), Gaps = 1/320 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGD 62 L L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + +Y GD Sbjct: 21 LVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCDYGSGD 80 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 V LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF M++ Sbjct: 81 GAVKLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFRMMV 140 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E S AL+ LS A +AEGE+ QL+ +KN++ +E +YL VI+ KTA LF+AA EV + Sbjct: 141 EVGSLRALDILSAAATVIAEGEVMQLTAAKNIETSENEYLAVIRGKTAELFAAACEVGPV 200 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AG S + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++LA Sbjct: 201 LAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIVLAL 260 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 +RG+ E+ FW+ T+ + +L++A I+ +RAL DT RA+ YG +A+ +L P Sbjct: 261 RRGSDEERAFWRRTLEREDRAEGDLQQALAILSRHRALDDTIERAHHYGDQARAALEPFP 320 Query: 303 DSSWKKSLMEVVDFCLQRLN 322 K +L++VVDFC+ R + Sbjct: 321 QGPMKAALLQVVDFCIARAH 340 >gi|121602666|ref|YP_988702.1| polyprenyl synthetase [Bartonella bacilliformis KC583] gi|120614843|gb|ABM45444.1| polyprenyl synthetase [Bartonella bacilliformis KC583] Length = 338 Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 168/322 (52%), Positives = 222/322 (68%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L +LT DME+ N LI+ I S++EMIP++ +LI SGGKRLRPM+TLA A M Y+ Sbjct: 17 LQPLINLTKDDMERANQLIISMIKSNIEMIPEICNHLISSGGKRLRPMITLAAAHMFGYQ 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF + Sbjct: 77 GDEHIKLATAVEFMHTATLLHDDVVDESNLRRGKSTARMIWGNQASVLVGDFLLGQAFKI 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ +S EAL LS A +AEGE+ QL+ + N++ +YL +I +KTA LFSAA EV Sbjct: 137 MVDARSMEALAILSNAAAVIAEGEVMQLAAANNIENDISNYLKIINAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG R AL+ YG +LG+AFQL+DD LDY G+ +GKNIG+DFR K T+PVI Sbjct: 197 PIIAGYGCEERSALRKYGTSLGLAFQLIDDALDYSGDAQHLGKNIGDDFREKKITMPVIF 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++ RG EK FWK T + S E A +M + + DT A YGQ A D+L Sbjct: 257 SYMRGNAVEKEFWKQTFKESNHSDEAFIHAQYLMEKYGCITDTIKHARIYGQHAIDALSS 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + DS K +L+EV+DFC+ R+N Sbjct: 317 IKDSPAKSALIEVIDFCIARVN 338 >gi|49473966|ref|YP_032008.1| octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse] gi|49239469|emb|CAF25820.1| Octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse] Length = 356 Score = 344 bits (883), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 166/322 (51%), Positives = 226/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L +LT DME+VN IL SD+EMIP++ +LI SGGKRLRPM+TLA+A M +Y+ Sbjct: 35 LQSLINLTKDDMERVNKFILSMAKSDIEMIPEISNHLISSGGKRLRPMITLASAHMFDYQ 94 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H+ LA A+EF+HTATLLHDDV+D+S LRRGK AR++WGNQ S+LVGDFLL QAF + Sbjct: 95 NDGHIKLATAVEFMHTATLLHDDVIDESNLRRGKSTARMIWGNQASILVGDFLLGQAFKL 154 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL L+ A +AEGE+ QLS KN++ + DYL +I +KTA LFSAA EV Sbjct: 155 MVDVGSIEALSVLANAAAIIAEGEVMQLSAVKNIETSTSDYLKIINAKTAALFSAAAEVG 214 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + R AL+ YG LG+AFQL+DDVLDY G +GKNIG+DFR GK T+PVIL Sbjct: 215 PIIAGYKYKERFALREYGTLLGLAFQLIDDVLDYGGTAKHLGKNIGDDFREGKITMPVIL 274 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+ RG EK FWK + + + E A ++ + +L DT +A +YG++A ++L Sbjct: 275 AYARGNTAEKAFWKQALENCNNNDETFAHAQHLIEKYDSLTDTIEQARAYGKRATNALAS 334 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + +S +L+E VDFC+ R+N Sbjct: 335 MNESPAHSALIETVDFCIARVN 356 >gi|300024374|ref|YP_003756985.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299526195|gb|ADJ24664.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 342 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 166/314 (52%), Positives = 222/314 (70%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L D+E +N +IL + SDVEMIP++ +LI SGGKRLRPML LA+A + Y G+ H+ Sbjct: 27 LVADDLEAINRIILDKAVSDVEMIPELAHHLIDSGGKRLRPMLALASAKLCGYGGNGHIR 86 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 A A+EF+HTATLLHDDVVD+SA RRG+ AR++WGNQ SVLVGDFLL QAF M ++ S Sbjct: 87 TASAVEFMHTATLLHDDVVDESATRRGRKTARMIWGNQASVLVGDFLLGQAFKMFVDVGS 146 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L +S A T+AEGE+ QL+ +KN TE+DYL +I +KTA LFSAA E + + Sbjct: 147 LPVLRIMSNAAATIAEGEVMQLAAAKNTSTTEDDYLAIINAKTAALFSAAAESGAALTQR 206 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + AL+SYG NLG+AFQLVDD LDY G+ + +GK++G+DFR GK TLPVIL+F+RG+ Sbjct: 207 PPEEQSALRSYGKNLGLAFQLVDDALDYAGDSSRLGKSVGDDFREGKITLPVILSFRRGS 266 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW TI DG I+ +L++A MR+++A+ T RA SYG A+D+L PDS Sbjct: 267 PEERQFWNRTIADGDINDGDLEQAVGFMRKHKAIEATFERARSYGAIARDALAIFPDSRE 326 Query: 307 KKSLMEVVDFCLQR 320 K +L +V+ FC+ R Sbjct: 327 KDALEQVIAFCIGR 340 >gi|49475216|ref|YP_033257.1| octaprenyl-diphosphate synthase [Bartonella henselae str. Houston-1] gi|49238021|emb|CAF27227.1| Octaprenyl-diphosphate synthase [Bartonella henselae str. Houston-1] Length = 356 Score = 341 bits (875), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 167/322 (51%), Positives = 221/322 (68%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L +LT DME VN I SDVE+IP++ +LI SGGKRLRPMLTLA+A M Y+ Sbjct: 35 LQSLVNLTKDDMEHVNQCIFSMAKSDVEIIPEISNHLISSGGKRLRPMLTLASARMFGYQ 94 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H+ LA A+EF+HTATLLHDDV+D+S LRRGK AR++WGNQ S+LVGDFLL QAF M Sbjct: 95 NDGHIKLATAVEFMHTATLLHDDVIDESNLRRGKSTARMIWGNQASILVGDFLLGQAFKM 154 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL L+ A +AEGE+ QLS +KN++ + DYL +I +KTA LFSAA EV Sbjct: 155 MVDVGSIEALSVLANAAAIIAEGEVMQLSATKNIETSISDYLKIINAKTAALFSAAAEVG 214 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + R AL+ YG LG+AFQL+DD LDY G +GKNIG+DFR GK T+PVIL Sbjct: 215 PIIAGYGHEERLALREYGTFLGLAFQLIDDALDYGGTAKYLGKNIGDDFREGKITMPVIL 274 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+ R EK FWK + +G + E A ++ + +L DT +A SYG+ A +L Sbjct: 275 AYARSNAVEKTFWKQALENGNSNDETFAHAQHLIEKYDSLTDTIEQARSYGKNATHALAA 334 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + +S +L+E VDFC+ R+N Sbjct: 335 ISESPIHNALIETVDFCIARVN 356 >gi|188582542|ref|YP_001925987.1| polyprenyl synthetase [Methylobacterium populi BJ001] gi|179346040|gb|ACB81452.1| Polyprenyl synthetase [Methylobacterium populi BJ001] Length = 351 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 166/317 (52%), Positives = 226/317 (71%), Gaps = 1/317 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHV 65 L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + Y GD V Sbjct: 35 LVADGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCGYGSGDGAV 94 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF M++E Sbjct: 95 KLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFRMMVEVG 154 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S AL+ LS A +AEGE+ QL+ +KN + +E++YL VI+ KTA LF+AA EV +++ Sbjct: 155 SLRALDILSAAATVIAEGEVMQLTAAKNTETSEDEYLAVIRGKTAELFAAACEVGPVLSQ 214 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++LA +RG Sbjct: 215 RPEAEQAACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIVLALRRG 274 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + E+ FW+ T+ + +L++A I+R +RAL +T RA+ YG A+++L P+ Sbjct: 275 SDEERAFWRRTLEREDLGEGDLEQALAILRRHRALDETIERAHHYGMMAREALAPFPNGP 334 Query: 306 WKKSLMEVVDFCLQRLN 322 K +L++VVDFC+ R + Sbjct: 335 MKSALLQVVDFCIARAH 351 >gi|170751717|ref|YP_001757977.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] gi|170658239|gb|ACB27294.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] Length = 339 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 165/316 (52%), Positives = 223/316 (70%), Gaps = 2/316 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNH 64 L M +VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + Y G + Sbjct: 22 LVADGMARVNTTILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACAQLCGYAGATEGD 81 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 V LA ++EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF M++E Sbjct: 82 VKLAASVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFRMMVEV 141 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 S AL+ LS A +AEGE+ QL+ +KNL+ E YL VI+ KTA LF+AA EV ++A Sbjct: 142 GSLRALDILSAAATVIAEGEVMQLTNAKNLETDEAAYLAVIRGKTAELFAAACEVGPVLA 201 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G + + A +SYGMNLGIAFQL+DDVLDY G E+GKN+G+DFR GK TLP++LA++R Sbjct: 202 GRPEAEQAAARSYGMNLGIAFQLIDDVLDYGGTSAELGKNVGDDFREGKITLPIVLAYRR 261 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 ++ E+ FW+ T+ G+I +L+ A +++ + AL +T RA+ YG +A+ +L PD Sbjct: 262 ASEGERGFWRRTLQQGEIGETDLETALDLLQRHGALEETVARAHHYGAEARAALDIFPDG 321 Query: 305 SWKKSLMEVVDFCLQR 320 K +L+ V+FC+ R Sbjct: 322 PVKAALIGAVEFCVAR 337 >gi|90420152|ref|ZP_01228060.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans SI85-9A1] gi|90335486|gb|EAS49236.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans SI85-9A1] Length = 337 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 166/316 (52%), Positives = 223/316 (70%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 +T DM +VN LIL S+VE+IP++ ++LI SGGKRLRPMLT+A+AL +YRGD HV Sbjct: 22 VTAPDMARVNDLILAMAGSNVELIPEIAEHLISSGGKRLRPMLTIASALAHDYRGDAHVK 81 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF ++E S Sbjct: 82 LAASVEFMHTATLLHDDVVDESDLRRGKKTARTIWGNQASVLVGDFLLGQAFKTMVEVGS 141 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL+ LS + +AEGE+ QLS +K++ +E DYL VI +KTA LF+AA EV +IAG Sbjct: 142 LTALDILSTASSVIAEGEVWQLSAAKHMTTSEADYLAVIDAKTAALFAAAAEVGPVIAGA 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + R A++ YG +LG+AFQLVDDVLDY G +GKN G+DFR GK TLPVILA+Q G Sbjct: 202 GEAERTAMRDYGRSLGLAFQLVDDVLDYGGTAAALGKNTGDDFREGKITLPVILAYQAGD 261 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 EK FW+ + G+ + L +A ++ ++ AL +T RA YG+ A + LP S Sbjct: 262 DTEKAFWREAMEGGRNDDKALARATALIHQHGALEETVQRARQYGEAAYAAASGLPQSPS 321 Query: 307 KKSLMEVVDFCLQRLN 322 + +++ VV+FC+ R++ Sbjct: 322 RDAMLGVVEFCIDRVS 337 >gi|154251178|ref|YP_001412002.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1] gi|154155128|gb|ABS62345.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1] Length = 339 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 164/317 (51%), Positives = 225/317 (70%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L+ L K+M+ VN I +R+ SDV M+P++ +LI SGGKRLRPMLT+A + + Y G + Sbjct: 21 LQALVAKEMQAVNEFIRERMASDVPMVPELASHLINSGGKRLRPMLTIAASRLCGYNGTD 80 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA +EF+HTATLLHDDVVD+S +RRG AR++WGNQ SVLVGDFLL +AF +++E Sbjct: 81 HIKLAATVEFLHTATLLHDDVVDESDMRRGAKTARMLWGNQASVLVGDFLLGRAFKLMVE 140 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 TKS ALE ++ A +AEGE+ QL+ +K+ TE+ YL VI++KTA LF+AA E+ ++I Sbjct: 141 TKSLRALEIIADAASVIAEGEVMQLAAAKDTGTTEDAYLRVIQAKTAALFAAATEIGAVI 200 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + S AL+SYG NLGIAFQLVDD LDY G +GKN+G+DFR GK TLPV+LAF+ Sbjct: 201 SEKNGSEAAALESYGRNLGIAFQLVDDALDYGGRAASLGKNVGDDFREGKITLPVVLAFR 260 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG E+ FW+ T+ G +L+ A +M ++ AL DT RA YG A D+L PD Sbjct: 261 RGNAEERAFWERTLQQGDRQEGDLEHAVDLMNKHAALEDTILRARHYGAIANDALAIFPD 320 Query: 304 SSWKKSLMEVVDFCLQR 320 S ++++L ++VDFC+ R Sbjct: 321 SPYRQALTDLVDFCINR 337 >gi|312115019|ref|YP_004012615.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311220148|gb|ADP71516.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 338 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 159/316 (50%), Positives = 227/316 (71%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L +M +VN +IL + SDV +IP++ ++LI SGGKRLRPMLT+ A M Y G H++ Sbjct: 23 LVHDEMGEVNNIILSQARSDVALIPELARHLINSGGKRLRPMLTIGAAKMCGYEGTGHIM 82 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA ++EF+HTATLLHDDVVD+S +RRGK +AR++WGNQ SVLVGDFLL QAF M+++ S Sbjct: 83 LAASVEFMHTATLLHDDVVDESDMRRGKKSARMLWGNQASVLVGDFLLGQAFRMMVDVGS 142 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL+ LS + +AEGE+ QL+ SKNL TEE+YL+VI SKTA LF+AA E+ +++ Sbjct: 143 LGALKVLSEASSVIAEGEVWQLAASKNLATTEEEYLNVIISKTAALFAAAAEIGAILTNR 202 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + AL+ YG N+G+AFQL+DD LDY GE +GK +G+DFR GK TLPV+L+++RGT Sbjct: 203 GPEEQAALRLYGTNIGLAFQLIDDALDYSGEAASLGKCVGDDFREGKITLPVVLSYRRGT 262 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW+ T+ +G I +L+ A IMR + A+ +T RA YG++A+++L P Sbjct: 263 PEERAFWRRTLQEGSIEDGDLEHAIQIMRRHNAIEETIQRAVYYGKEAREALAIFPAGEA 322 Query: 307 KKSLMEVVDFCLQRLN 322 +K+L++ VDF + R++ Sbjct: 323 RKALIDAVDFSIARMH 338 >gi|254470016|ref|ZP_05083420.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062] gi|211960327|gb|EEA95523.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062] Length = 337 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 167/322 (51%), Positives = 225/322 (69%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L +L DMEKVN LIL + S+VE+IP++ ++LI SGGKRLRPMLTLA A M Y Sbjct: 16 IQGLVELVSGDMEKVNELILSKAGSNVELIPEIARHLIDSGGKRLRPMLTLAFAQMFGYE 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV+LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M Sbjct: 76 GEGHVILAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKM 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ +S EAL LS + +AEGE+ QL +++ T + YL VI++KTA LF+AA EVS Sbjct: 136 MVDVRSLEALRILSEASAIIAEGEVLQLGAAQDTTTTYDMYLRVIEAKTAALFAAACEVS 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 IA + +R A + +G+ LG AFQLVDD LDY G ++GK++G+DF GK TLPVI Sbjct: 196 PEIADKGDEMRAAARKFGLELGYAFQLVDDALDYGGATVDLGKDVGDDFHEGKITLPVIY 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A +RG+ +K FWK + DG I +L A ++ + AL DT RA YG A D+L Sbjct: 256 AMERGSDEDKAFWKRCLEDGDIKDGDLDHAIKLLNDTGALADTVQRARDYGASAIDALSV 315 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 PD K++L E VDFC+ R++ Sbjct: 316 FPDGPAKQALKEAVDFCIARVS 337 >gi|118593444|ref|ZP_01550824.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata IAM 12614] gi|118433923|gb|EAV40581.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata IAM 12614] Length = 338 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 166/322 (51%), Positives = 227/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DL M +VN LIL + S+VE+IP++ K+LI SGGKRLRPMLTLA A M Y+ Sbjct: 17 IQPLVDLVSGGMGEVNELILSKAGSNVELIPEIAKHLISSGGKRLRPMLTLACADMFGYQ 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M Sbjct: 77 GDGHVTLAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL LS + +AEGE+ QL +KN+ TE DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLEALRILSTASAVIAEGEVLQLGAAKNIATTEADYLRVIEAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG +++A ++YGM LG AFQLVDD LDY G ++GK++G+DFR GK TLPV+L Sbjct: 197 PVIAGQSAEMKRAARTYGMELGYAFQLVDDALDYGGSSADLGKDVGDDFREGKITLPVVL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A RGT +++FW+ + +I +L++A ++ + AL +T RA YG KA +L Sbjct: 257 AVARGTDADRDFWRRCLEGEEIQDGDLEQAIELLNKYDALSETIERAKDYGNKALAALDT 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP + +L + V FC+ R++ Sbjct: 317 LPSGAHSDALGDAVAFCISRVS 338 >gi|328543228|ref|YP_004303337.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase [polymorphum gilvum SL003B-26A1] gi|326412974|gb|ADZ70037.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase [Polymorphum gilvum SL003B-26A1] Length = 336 Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 161/322 (50%), Positives = 223/322 (69%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DL +DME VN LIL + S+V++IP++ K+LI SGGKRLRPMLTLA A M Y+ Sbjct: 15 IQSLVDLVARDMEAVNRLILSKAGSNVDLIPEIAKHLIDSGGKRLRPMLTLALADMFGYQ 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV L+ ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M Sbjct: 75 GSGHVTLSASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKM 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL L+ + +AEGE+ QL +KNL +E Y+ VI++KTA LF+AA EV Sbjct: 135 MVDVGSLEALRVLAEASAVIAEGEVMQLGAAKNLATSEASYMKVIEAKTAALFAAAAEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG A + YGM LG+AFQLVDD LDY G ++GK +G+DFR GK TLPV++ Sbjct: 195 PIIAGQSAETCAAARRYGMELGLAFQLVDDALDYGGSSADLGKQVGDDFREGKITLPVVV 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A +RG+ ++ FW+ + I +L+ A ++R + A+ +T RA YG A ++L Sbjct: 255 AVERGSDEDRAFWRRCLETDGIRDGDLEHAIGLLRRHGAIEETIARARHYGASAIEALAA 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP + +L E V+FC+ R+N Sbjct: 315 LPAGRHRDALHEAVEFCISRVN 336 >gi|144898411|emb|CAM75275.1| Polyprenyl synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 346 Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 220/314 (70%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L D+EKVN I+ R+ S VE+IP + ++I +GGKRLRP+LTLA+A + + G+ HV Sbjct: 31 LVKDDLEKVNRTIIDRMHSPVELIPQLAGHIIAAGGKRLRPVLTLASAKLAGHSGERHVK 90 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG+ +A ++GN+ SVLVGDFL S++F +++E S Sbjct: 91 LAACVEFIHTATLLHDDVVDESELRRGQASANALFGNKPSVLVGDFLFSRSFELMVEDGS 150 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L LS + +AEGE+ QL + + D +E+ YL VI+SKTA LF+AA + +++A Sbjct: 151 LPVLAILSRASSVIAEGEVLQLITANDTDTSEDSYLEVIRSKTAALFAAACRIGAIVADR 210 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + AL SYG+NLGIAFQL+DDVLDY + +GK +G+DFR GK TLP+ILAF+RG Sbjct: 211 PKAEEDALDSYGLNLGIAFQLIDDVLDYSAKQAVLGKTVGDDFREGKITLPIILAFRRGN 270 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ FW+ T+ + +L++A +M ++ AL DT RA YG+ A+D+L PDS Sbjct: 271 DEQREFWRRTVERLEQQDGDLEQAIALMEKHGALADTIARARHYGEVARDALALFPDSPV 330 Query: 307 KKSLMEVVDFCLQR 320 K+++++V+DFC+ R Sbjct: 331 KQAMIDVIDFCIDR 344 >gi|254503516|ref|ZP_05115667.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] gi|222439587|gb|EEE46266.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] Length = 318 Score = 315 bits (806), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 161/317 (50%), Positives = 226/317 (71%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL M VN LIL + S+V++IP++ K+LI SGGKRLRPMLTLA A M Y+G HV Sbjct: 2 DLVAPGMADVNELILSKAGSNVDLIPEIAKHLISSGGKRLRPMLTLAFADMFGYQGSGHV 61 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M+++T Sbjct: 62 ILAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKMMVDTG 121 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S EAL LS + +AEGE+ QL SKN++ TE +YL VI++KTA LF+AA EV IAG Sbjct: 122 SLEALRILSEASAIIAEGEVLQLGASKNIETTEAEYLRVIEAKTAALFAAAAEVGPEIAG 181 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + +R+A ++YG+ LG AFQ+VDD LDY G ++GK++G+DFR GK TLPV+LA RG Sbjct: 182 QNDVMRKAARTYGLELGYAFQMVDDALDYGGSSADLGKDVGDDFREGKITLPVVLAVARG 241 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T +++ FWK + ++ ++L +A ++++ A+ +T RA +YG A +L LP + Sbjct: 242 TDQDRAFWKRCMEGDNVTDDDLAEAIELLKKFDAIAETVQRARTYGDNALKALDQLPACA 301 Query: 306 WKKSLMEVVDFCLQRLN 322 +L + V FC+ R++ Sbjct: 302 HTDALADAVAFCIARVS 318 >gi|241912483|gb|ACS71955.1| putative geranylgeranyl pyrophosphate synthase [Azospirillum brasilense] Length = 338 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 158/320 (49%), Positives = 223/320 (69%), Gaps = 3/320 (0%) Query: 4 LEDLTL---KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 L+DLT D+ VN +I++R+ S V+MIP + YLI +GGKRLRP+LTLA A + Y+ Sbjct: 17 LDDLTALVADDLSAVNEIIVQRMHSSVDMIPQLAGYLIAAGGKRLRPVLTLAAAELCGYK 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H +LA +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL S++F + Sbjct: 77 GEDHKMLAAVVEFIHTATLLHDDVVDESDLRRGLASANAVFGNKASVLVGDFLFSRSFEL 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S + L LS + +AEGE+ QL + + + +E+ YL VIK+KTA LF+AA V Sbjct: 137 MVEVGSLDVLRILSKASAVIAEGEVLQLRTTNDTETSEQAYLEVIKAKTAELFAAACRVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL YGMNLGIAFQLVDDVLDY + ++GK +G+DFR GK TLPV+L Sbjct: 197 AVVAARPQAEELALYDYGMNLGIAFQLVDDVLDYSAKQAKLGKTVGDDFREGKITLPVVL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW+ T+ + +L++A +M ++ AL DT RA YG A+D+L Sbjct: 257 AFRRGNDEERAFWRRTMEELDQQEGDLERAQELMAKHNALKDTVERARHYGSIARDALGL 316 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PD+ K +L+EV+DF ++R Sbjct: 317 FPDTPVKAALLEVLDFVIER 336 >gi|288960115|ref|YP_003450455.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510] gi|288912423|dbj|BAI73911.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510] Length = 342 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 162/320 (50%), Positives = 217/320 (67%), Gaps = 3/320 (0%) Query: 4 LEDLTL---KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 L+DLT +D+ VN +IL R+ S VEMIP + YLI +GGKRLRP+LTLA A + Y+ Sbjct: 21 LDDLTALVAEDLSAVNQIILDRMQSQVEMIPQLAGYLIAAGGKRLRPVLTLAAANLCGYQ 80 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H LLA +EFIH+ATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL S+AF M Sbjct: 81 GEHHRLLAAVVEFIHSATLLHDDVVDESDLRRGMASANAVFGNKASVLVGDFLFSRAFEM 140 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E +S + L LS + +AEGE+ QL + + + +E+ YL VIK KTA LF+AA V Sbjct: 141 MVEVQSLDVLRILSGASAIIAEGEVLQLRTTNDTETSEQAYLEVIKGKTAELFAAACRVG 200 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL YGMNLGIAFQLVDDVLDY ++GK +G+DFR GK TLPV+L Sbjct: 201 AVVANRPQAEELALYDYGMNLGIAFQLVDDVLDYSALQAKLGKTVGDDFREGKITLPVVL 260 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW+ + D +L+ A +M + AL DT RA YG A+DSL Sbjct: 261 AFRRGNDEERAFWRRVMEDLDQKDGDLEHAQTLMARHNALKDTVERARHYGSIARDSLGL 320 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 D K++L+EV+DF + R Sbjct: 321 FADGPIKQALLEVIDFVIDR 340 >gi|103486007|ref|YP_615568.1| trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256] gi|98976084|gb|ABF52235.1| Trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256] Length = 337 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 153/314 (48%), Positives = 213/314 (67%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +VN +IL R+ S+V +IP++ +LI GGKR+RPMLTLA +L+Y G H Sbjct: 22 LVAADMNEVNAVILDRMQSEVPLIPELAGHLIAGGGKRMRPMLTLACGRLLDYPGRRHCK 81 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S+AF +++E S Sbjct: 82 LAAAVEFIHTATLLHDDVVDKSDLRRGRKTANVIWGNSASVLVGDFLFSRAFEVMVEDGS 141 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ LS + +AEGE+ QLS + ++ +E+ YL +I +KTA LF+AA ++++++A Sbjct: 142 LKVLKILSRASAVIAEGEVNQLSAQRRIETSEDQYLAIINAKTAELFAAACKIAAVVAER 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + AL +YG NLGIAFQLVDD +DY + MGK +G+DFR+GK TLPVILA+ RG+ Sbjct: 202 DEATEAALDAYGRNLGIAFQLVDDAIDYVSDAETMGKGVGDDFRDGKVTLPVILAYARGS 261 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E++FWK I K S E+L A ++R++ + DT RA YGQ+A D++ S Sbjct: 262 AEERDFWKQAITGHKTSDEDLVYATSLLRKHDTIADTLARARHYGQRAVDAIGGFRASQA 321 Query: 307 KKSLMEVVDFCLQR 320 K +L E V F + R Sbjct: 322 KSALTEAVAFAVAR 335 >gi|83311261|ref|YP_421525.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] gi|82946102|dbj|BAE50966.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] Length = 339 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 150/314 (47%), Positives = 220/314 (70%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L D++KVN I+ R+ S VEMIP + ++I +GGKRLRP+LTLA+A + + G+ H+ Sbjct: 24 LVKDDLQKVNHAIVDRMHSPVEMIPQLAGHIIAAGGKRLRPVLTLASAKLAGHTGERHIK 83 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG+ +A ++GN+ SVLVGDFL S++F +++E S Sbjct: 84 LAACVEFIHTATLLHDDVVDESELRRGQASANALFGNKPSVLVGDFLFSRSFELMVEDGS 143 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L LS + +AEGE+ QL + + + +E+ YL VI+SKTA LF+AA + +++A Sbjct: 144 LSVLAILSRASSVIAEGEVLQLITANDTETSEDSYLEVIRSKTAALFAAACRIGAVVADR 203 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +AL+SYG+NLGIAFQL+DDVLDY + +GK +G+DFR GK TLPVILAF+RG Sbjct: 204 PKVEEEALESYGLNLGIAFQLIDDVLDYSAKQAVLGKTVGDDFREGKITLPVILAFRRGG 263 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW+ + + S E++ +A +M ++ +L T RA YG+ A+D+L PDS Sbjct: 264 DEERAFWRRCLEELDQSDEDIGQAIKLMEKHGSLAATIARARHYGEIARDALGIFPDSPV 323 Query: 307 KKSLMEVVDFCLQR 320 K+++++V+DFC+ R Sbjct: 324 KQAMIDVIDFCIDR 337 >gi|83945354|ref|ZP_00957702.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii HTCC2633] gi|83851188|gb|EAP89045.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii HTCC2633] Length = 351 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 144/317 (45%), Positives = 211/317 (66%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L L DM V +I +R+ S IP YL+ +GGKR+RP++T+ A ML Y GD Sbjct: 33 LATLASDDMAAVEAVIEERMASATRSIPQTADYLVAAGGKRIRPLITVTAARMLGYEGDG 92 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA A+E+IH+ATLLHDDVVD+S LRRGK A VWGN SVLVGDFL +++F M+++ Sbjct: 93 HVSLAAAVEYIHSATLLHDDVVDESELRRGKAPANTVWGNAHSVLVGDFLFARSFMMMVD 152 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +AL LS A +AEGE+RQL+ +N+D++ ++Y+ +I +KTA LFSAA +V+ ++ Sbjct: 153 AGSMDALHVLSRAASVIAEGEVRQLAAVRNIDISRDEYMSIIDAKTAALFSAAAQVAPIL 212 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G ++ L++YG LG+AFQLVDD LDY G E+GKN G+DFR GK TLPV LA + Sbjct: 213 YGSDKAIEDGLETYGRELGLAFQLVDDALDYGGMAAELGKNTGDDFREGKITLPVALAME 272 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + RE+ FWK I+DG+ + + +A I++++ AL T A ++ A ++L+ P Sbjct: 273 NASARERAFWKRVISDGEQTDADFDEALAILKKHGALDATLEAARTHAANAVNALKIAPQ 332 Query: 304 SSWKKSLMEVVDFCLQR 320 + W ++L + +F ++R Sbjct: 333 NEWTEALAALPEFVVER 349 >gi|23014219|ref|ZP_00054047.1| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum magnetotacticum MS-1] Length = 339 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 148/314 (47%), Positives = 220/314 (70%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L D+EKVN I+ R+ S VE+IP + ++I +GGKRLRP+LTLA+A + + G+ H+ Sbjct: 24 LVKDDLEKVNRAIVDRMHSPVELIPQLAGHIIAAGGKRLRPVLTLASAKLAGHTGERHIK 83 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG+ +A ++GN+ SVLVGDFL S++F +++E S Sbjct: 84 LAACVEFIHTATLLHDDVVDESELRRGQASANALFGNKPSVLVGDFLFSRSFELMVEDGS 143 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L LS + +AEGE+ QL + + + +E+ YL VI+SKTA LF+AA + +++A Sbjct: 144 LSVLAILSHASSVIAEGEVLQLITANDTETSEDSYLEVIRSKTAALFAAACRIGAVVADR 203 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +AL+SYG+NLGIAFQL+DDVLDY + +GK +G+DFR GK TLPVILAF+RG Sbjct: 204 PKVEEEALESYGLNLGIAFQLIDDVLDYSAKQAVLGKTVGDDFREGKITLPVILAFRRGD 263 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW+ + + + ++ +A +M ++ +L T RA YG+ A+D+L PDS+ Sbjct: 264 DEERAFWRRCLEELDQADNDIGRAIKLMEKHGSLAATIARARHYGEIARDALGIFPDSAV 323 Query: 307 KKSLMEVVDFCLQR 320 K+++++V+DFC+ R Sbjct: 324 KQAMIDVIDFCIDR 337 >gi|56551460|ref|YP_162299.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543034|gb|AAV89188.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 337 Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 156/320 (48%), Positives = 214/320 (66%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L L DM+ VN +IL R+ S+V +IP++ +LI SGGKR+RPML LA + ++ Sbjct: 16 LKPLMHLVASDMQAVNQVILDRMQSEVPLIPELAGHLISSGGKRMRPMLMLACSRLIGEP 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H LA AIEFIHTATLLHDDVVD S LRRGK A +WGN +VLVGDFLLS+AF M Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDVVDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAFEM 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E+ S ALE LS A + +GE+ QL ++ E YL +I +KTAVLF+A+ ++ Sbjct: 136 MVESGSLRALEILSNAAAIITQGEVDQLVSQYQVETDEARYLSIIGAKTAVLFAASCRIA 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG Q+L YG LGIAFQL DD +DY + MGK +G+DFR+GK TLPVIL Sbjct: 196 AVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSDSQTMGKGVGDDFRDGKVTLPVIL 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+QRG K +++FW+ I +++ +L A I++ AL DT RA YG+KA SL+ Sbjct: 256 AYQRGEKADRDFWREAIEGRRVADSDLDIAKILLVNTDALSDTLERARLYGEKAIQSLKA 315 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PD + K++L+E V+F + R Sbjct: 316 FPDGAVKEALVEAVEFTIAR 335 >gi|241761105|ref|ZP_04759194.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374724|gb|EER64185.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 337 Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 156/320 (48%), Positives = 214/320 (66%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L L DM+ VN +IL R+ S+V +IP++ +LI SGGKR+RPML LA + ++ Sbjct: 16 LKPLMHLVASDMQAVNQVILDRMQSEVPLIPELAGHLISSGGKRMRPMLMLACSRLIGEP 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H LA AIEFIHTATLLHDDVVD S LRRGK A +WGN +VLVGDFLLS+AF M Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDVVDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAFEM 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E+ S ALE LS A + +GE+ QL ++ E YL +I +KTAVLF+A+ ++ Sbjct: 136 MVESGSLRALEILSNAAAIITQGEVDQLVSQYQVETDEARYLSIIGAKTAVLFAASCRIA 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG Q+L YG LGIAFQL DD +DY + MGK +G+DFR+GK TLPVIL Sbjct: 196 AVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSDSQTMGKGVGDDFRDGKVTLPVIL 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+QRG K +++FW+ I +++ +L A I++ AL DT RA YG+KA SL+ Sbjct: 256 AYQRGEKADRDFWREAIEGRRVADSDLDIAKILLVNTDALSDTLERARLYGEKAIQSLKA 315 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PD + K++L+E V+F + R Sbjct: 316 FPDGAVKEALIEAVEFTIAR 335 >gi|260752929|ref|YP_003225822.1| trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552292|gb|ACV75238.1| Trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 337 Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 156/320 (48%), Positives = 213/320 (66%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L L DM+ VN +IL R+ S+V +IP++ +LI SGGKR+RPML LA + ++ Sbjct: 16 LKPLMHLVASDMQAVNQVILDRMQSEVPLIPELAGHLISSGGKRMRPMLMLACSRLIGEP 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H LA AIEFIHTATLLHDDVVD S LRRGK A +WGN +VLVGDFLLS+AF M Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDVVDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAFEM 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E+ S ALE LS A + +GE+ QL ++ E YL +I +KTAVLF+A+ ++ Sbjct: 136 MVESGSLRALEILSNAAAIITQGEVDQLVSQYQVETDEARYLSIIGAKTAVLFAASCRIA 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG Q+L YG LGIAFQL DD +DY + MGK +G+DFR+GK TLPVIL Sbjct: 196 AVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSDSQTMGKGVGDDFRDGKVTLPVIL 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+QRG K +++FW+ I +++ +L A I++ AL DT RA YG+KA SL Sbjct: 256 AYQRGEKADRDFWREAIEGRRVADSDLDIAKILLVNTDALSDTLERARLYGEKAIQSLEA 315 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PD + K++L+E V+F + R Sbjct: 316 FPDGAVKEALIEAVEFTIAR 335 >gi|148556350|ref|YP_001263932.1| polyprenyl synthetase [Sphingomonas wittichii RW1] gi|148501540|gb|ABQ69794.1| Polyprenyl synthetase [Sphingomonas wittichii RW1] Length = 341 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 150/314 (47%), Positives = 208/314 (66%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN +IL R+ SDV +IP++ +LI GGKR+RPMLTLA A +L+Y G+ H Sbjct: 26 LVAADMNAVNSVILARMQSDVPLIPELAGHLIAGGGKRMRPMLTLACAKLLDYAGERHHK 85 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S++F +++E S Sbjct: 86 LAATVEFIHTATLLHDDVVDQSGLRRGRSTANMIWGNAASVLVGDFLFSRSFELMVEDGS 145 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L LS + +AEGE+ QL+ + ++ +EE YL +I +KTAVLF+AA +++++A Sbjct: 146 LRVLRILSNASAVIAEGEVNQLTAQRRIETSEERYLEIIAAKTAVLFAAACRIAAVVAER 205 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +V +AL YG LGIAFQLVDDV+DY + MGK+ G+DFR+GK TLPVILA+ R Sbjct: 206 EPAVEEALDQYGRYLGIAFQLVDDVIDYVSDGATMGKDAGDDFRDGKVTLPVILAYARAE 265 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +++F + I + E+L +A I+R AL DT RA Y Q+A D+L P Sbjct: 266 AADRDFLREAIEGLRNEDEDLVRATGILRGTGALADTAARARHYAQRAIDALASFPAGQA 325 Query: 307 KKSLMEVVDFCLQR 320 + +L+E F + R Sbjct: 326 RSALIEAAQFAVSR 339 >gi|296284709|ref|ZP_06862707.1| geranylgeranyl pyrophosphate synthase [Citromicrobium bathyomarinum JL354] Length = 340 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 148/314 (47%), Positives = 206/314 (65%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT M VN +IL R+ S++ +IP + +LI GGKRLRPMLTLA A ++ Y G H Sbjct: 25 LTASGMNAVNTVILDRMQSEIPLIPSLAGHLISGGGKRLRPMLTLAGAELVGYNGTRHHK 84 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S +RRGK AA +++GN +VLVGDFL S+AF ++ E S Sbjct: 85 LAAAVEFIHTATLLHDDVVDGSEMRRGKAAANIIFGNPATVLVGDFLFSRAFELMTEDGS 144 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ LS + +AEGE+ QL+ + + +E+ YL +I SKTA LF+AA +++++A Sbjct: 145 LKVLKILSSASAIIAEGEVAQLTSQRKITTSEQRYLDIIGSKTAALFAAASRIAAVVAEC 204 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ QAL YG NLGIAFQLVDD LDY + EMGK+ G+DFR GK TLPVILA+ RG Sbjct: 205 SDAEEQALDDYGRNLGIAFQLVDDALDYSSDAAEMGKDRGDDFREGKMTLPVILAYARGD 264 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW++ I + S E+L A ++ + + T RA + Q A D+L PD Sbjct: 265 AEERKFWEAAILGHRTSDEDLAHAVSLVERHDCVTATRERARHFAQMAADALSIFPDGKA 324 Query: 307 KKSLMEVVDFCLQR 320 +++++E F + R Sbjct: 325 REAMVEAAHFAVAR 338 >gi|254512243|ref|ZP_05124310.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium KLH11] gi|221535954|gb|EEE38942.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium KLH11] Length = 332 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 152/320 (47%), Positives = 209/320 (65%), Gaps = 1/320 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L +L +ME VN LI R+ SD IP+V +L+ +GGKRLRPMLTLA A + +Y GD Sbjct: 13 LAELLAAEMEAVNGLIRTRMASDHAPRIPEVTAHLVEAGGKRLRPMLTLAAAQLFDYSGD 72 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +H+ LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +++ Sbjct: 73 HHIRLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMV 132 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 ET S L+ L+ + T+AEGE+ Q++ + +LD +E YL V++ KTA LFSAA EV + Sbjct: 133 ETGSLRVLDILANASATIAEGEVLQMTAATDLDTSEAIYLQVVRGKTAALFSAATEVGGV 192 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 IAG + +AL YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI A Sbjct: 193 IAGASDEQVRALYDYGDALGIAFQIADDLLDYQGDSAATGKNVGDDFRERKLTLPVIKAV 252 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + T E FW+ TI G+ +L A +MR+ L T A + KAK +L+ LP Sbjct: 253 AQATAEEHAFWERTIGRGRQEEGDLDHALSLMRKYGTLEATRADALGWATKAKTALQLLP 312 Query: 303 DSSWKKSLMEVVDFCLQRLN 322 D + L + D+ + RLN Sbjct: 313 DHEIRNLLGALADYVVSRLN 332 >gi|307294472|ref|ZP_07574314.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1] gi|306878946|gb|EFN10164.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1] Length = 346 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 152/314 (48%), Positives = 214/314 (68%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L + M +VN +IL R+ S + +IP++ +LI GGKR+RPMLTLA A ++ Y G H Sbjct: 31 LVAEGMNQVNAVILDRMQSRIPLIPELAGHLIAGGGKRMRPMLTLACADLVGYAGSRHYK 90 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S++F +++E +S Sbjct: 91 LAAAVEFIHTATLLHDDVVDGSGLRRGRKTANIIWGNSASVLVGDFLFSRSFELMVEAES 150 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ LS + +AEGE+ QL+ + +D +EE YL +I +KTA LF+AA +S+++A Sbjct: 151 LKVLKILSNASAVIAEGEVNQLTAQRKIDTSEEQYLDIIGAKTAALFAAACRISAVVADR 210 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QAL YG NLGIAFQL+DD +DY + MGK+ G+DFR+GK TLPVILA+ RG+ Sbjct: 211 DEAEEQALDVYGRNLGIAFQLIDDAIDYESDGATMGKDAGDDFRDGKVTLPVILAYARGS 270 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FWK+ I ++S E+L A ++R+ A+ DT RA YGQ+A D+L + Sbjct: 271 DEERTFWKAAIAGNRVSDEDLAHATGLLRKTGAIADTLARARHYGQRAIDALGMFDNGKA 330 Query: 307 KKSLMEVVDFCLQR 320 K +L E V+F + R Sbjct: 331 KAALTEAVEFAIAR 344 >gi|163792420|ref|ZP_02186397.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] gi|159182125|gb|EDP66634.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] Length = 340 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 153/317 (48%), Positives = 211/317 (66%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L L +M KVN IL+ + S V +IP + +++ SGGKRLRPMLTLATA + Y G+ Sbjct: 22 LRRLVDANMLKVNRAILEHMQSPVALIPQLAGHIVASGGKRLRPMLTLATAGLCGYTGER 81 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA +EFIHTATLLHDDVVD+S LRRG+ A VWGNQ SVLVGDFL S+AF +++ Sbjct: 82 HIGLAACVEFIHTATLLHDDVVDESDLRRGQDTANAVWGNQASVLVGDFLFSRAFQLMVG 141 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S + L+ LS + +AEGE+ QL + ++D TE YL VI+ KTA LF+AA ++ ++ Sbjct: 142 DGSLKVLKILSDASAIIAEGEVHQLITTNDIDTTEAAYLEVIRCKTAQLFAAAAQIGPVV 201 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + AL+ +G +LG+AFQLVDDVLDY E +GK +G+DFR GK TLPVILA+Q Sbjct: 202 AERPEAEEMALEGFGRDLGVAFQLVDDVLDYAAEQAALGKTVGDDFREGKVTLPVILAYQ 261 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G E+ FWK TI D ++L +A +M ++ L + RA Y A+ +LR P Sbjct: 262 AGDDPERAFWKRTIGDLDQRDDDLAEAQRLMAKHGTLEASLNRARDYADAAQAALRSFPA 321 Query: 304 SSWKKSLMEVVDFCLQR 320 + ++ +L E+VDFC++R Sbjct: 322 NPYRAALEELVDFCVER 338 >gi|294012754|ref|YP_003546214.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S] gi|292676084|dbj|BAI97602.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S] Length = 346 Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 151/314 (48%), Positives = 214/314 (68%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L + M +VN +IL R+ S + +IP++ +LI GGKR+RPMLTLA A ++ Y G H Sbjct: 31 LVAEGMNQVNAVILDRMQSRIPLIPELAGHLIAGGGKRMRPMLTLACADLVGYAGSRHYK 90 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S++F +++E +S Sbjct: 91 LAAAVEFIHTATLLHDDVVDGSGLRRGRKTANIIWGNSASVLVGDFLFSRSFELMVEAES 150 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ LS + +AEGE+ QL+ + +D +EE YL +I +KTA LF+AA +S+++A Sbjct: 151 LKVLKILSNASAVIAEGEVNQLTAQRKIDTSEEQYLDIIGAKTAALFAAACRISAVVADR 210 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QAL YG NLGIAFQL+DD +DY + MGK+ G+DFR+GK TLPVILA+ RG+ Sbjct: 211 DEAEEQALDVYGRNLGIAFQLIDDAIDYESDGATMGKDAGDDFRDGKVTLPVILAYARGS 270 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FWK+ I ++S E+L A ++R+ A+ DT RA YGQ+A D+L + Sbjct: 271 DEERAFWKAAIAGNRVSDEDLAHATGLLRKTGAIADTLARARHYGQRAIDALGMFDNGKA 330 Query: 307 KKSLMEVVDFCLQR 320 + +L E V+F + R Sbjct: 331 RAALTEAVEFAIAR 344 >gi|326403627|ref|YP_004283709.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301] gi|325050489|dbj|BAJ80827.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301] Length = 344 Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 147/310 (47%), Positives = 205/310 (66%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ + N IL R+ SDVE+IP + +LI +GGKRLRP+LTLA A + YRG+ H+ LA Sbjct: 33 DLTETNRTILARMASDVELIPQLAAHLIAAGGKRLRPLLTLAAARLCGYRGERHIHLAAC 92 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL ++AF +++E S + L Sbjct: 93 VEFIHTATLLHDDVVDESGLRRGLASANAVFGNKASVLVGDFLFARAFELMVEDGSLDVL 152 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L + T+AEGE+ QL+ +L Y VI+ KTA LF+AA EV ++A ++V Sbjct: 153 RILCNASATIAEGEVLQLTTQNDLSTDIPRYFKVIEGKTAALFAAACEVGGVVADRDSAV 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL YG LG+AFQLVDD LDY + NE+GK +G+DFR GK T PV++A+ G E+ Sbjct: 213 CGALAGYGAALGMAFQLVDDALDYAADQNELGKTVGDDFREGKLTYPVLVAYAAGDGPER 272 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FW+ TI DG+ + +L A ++R + A+ T A ++ +KAKD+L LPD + + Sbjct: 273 AFWRRTIEDGEQTETDLATALDLIRRHDAIGQTIREADAFARKAKDALATLPDDPLRALM 332 Query: 311 MEVVDFCLQR 320 ME D+ + R Sbjct: 333 MEAADYAVSR 342 >gi|209964973|ref|YP_002297888.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum SW] gi|209958439|gb|ACI99075.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum SW] Length = 340 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 154/314 (49%), Positives = 210/314 (66%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L D+ VN IL R+ S VE+IP + Y++ GGKRLRP+LTLA A + Y+G Sbjct: 25 LVADDLNAVNEQILSRMHSSVELIPQLGGYIVAGGGKRLRPVLTLAAAQLCGYQGTRQTA 84 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EF+HTATLLHDDVVD+S LRRG+ +A V+GN+ SVLVGDFL ++AF +++E S Sbjct: 85 LAACVEFLHTATLLHDDVVDESDLRRGQASANAVFGNKASVLVGDFLFARAFQIMVEDGS 144 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L L + +AEGE+ QL+ + + D TEE YL VIK+KTA LF+AA E+ ++A Sbjct: 145 LDVLRILCTASAVIAEGEVLQLTTTNDTDTTEEAYLEVIKAKTAELFAAACELGGIVADR 204 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + AL+SYGMNLGIAFQLVDDVLDY +GK IG+DFR GK LPV+LAF+RG Sbjct: 205 PAVEQAALRSYGMNLGIAFQLVDDVLDYSAVQARLGKTIGDDFREGKINLPVVLAFRRGD 264 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + E+ FW+ T+ D +L+ A +M + AL D+ RA YG A+D+L P+S Sbjct: 265 EEERQFWRRTMEDLDQRDGDLEHAIALMTRHNALHDSVERARHYGAVARDALEMFPNSRI 324 Query: 307 KKSLMEVVDFCLQR 320 K +L++V+DF + R Sbjct: 325 KHALLDVIDFVVSR 338 >gi|148260434|ref|YP_001234561.1| polyprenyl synthetase [Acidiphilium cryptum JF-5] gi|146402115|gb|ABQ30642.1| Polyprenyl synthetase [Acidiphilium cryptum JF-5] Length = 344 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 147/310 (47%), Positives = 205/310 (66%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ + N IL R+ SDVE+IP + +LI +GGKRLRP+LTLA A + YRG+ H+ LA Sbjct: 33 DLTETNRTILARMASDVELIPQLAAHLIAAGGKRLRPLLTLAAARLCGYRGERHIHLAAC 92 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL ++AF +++E S + L Sbjct: 93 VEFIHTATLLHDDVVDESGLRRGLASANAVFGNKASVLVGDFLFARAFELMVEDGSLDVL 152 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L + T+AEGE+ QL+ +L Y VI+ KTA LF+AA EV ++A ++V Sbjct: 153 RILCNASATIAEGEVLQLTTQNDLSTDIPRYFKVIEGKTAALFAAACEVGGVVADRDSAV 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL YG LG+AFQLVDD LDY + NE+GK +G+DFR GK T PV++A+ G E+ Sbjct: 213 CGALACYGAALGMAFQLVDDALDYAADQNELGKTVGDDFREGKLTYPVLVAYAAGDGPER 272 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FW+ TI DG+ + +L A ++R + A+ T A ++ +KAKD+L LPD + + Sbjct: 273 AFWRRTIEDGEQTETDLATALDLIRRHDAIGQTIREADAFARKAKDALATLPDDPLRALM 332 Query: 311 MEVVDFCLQR 320 ME D+ + R Sbjct: 333 MEAADYAVSR 342 >gi|114705279|ref|ZP_01438187.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506] gi|114540064|gb|EAU43184.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506] Length = 338 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 162/316 (51%), Positives = 222/316 (70%), Gaps = 1/316 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHV 65 LT +DM +VN LIL S VE+IP++ +LI SGGKRLRPMLT+A+AL Y GD HV Sbjct: 22 LTQRDMGRVNDLILSMAGSRVELIPEIANHLISSGGKRLRPMLTIASALAHGYEEGDAHV 81 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA ++EF+HTATLLHDDVVD+S LRRG+ AR +WGNQ SVLVGD+LL QAF M+++ Sbjct: 82 KLAASVEFMHTATLLHDDVVDESDLRRGRRTARTIWGNQASVLVGDYLLGQAFKMMVDVG 141 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S AL LS + +AEGE+ QL+ +K + +E DYL V+ +KTA LF+AA EV +IAG Sbjct: 142 SMAALAILSDASAVIAEGEVWQLAAAKRMTTSEADYLSVVDAKTAALFAAAAEVGPVIAG 201 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 R+A++ YG +LGI+FQL+DDVLDY G ++GKN G+DFR GK TLPVILA++ G Sbjct: 202 KSMREREAMRRYGRSLGISFQLIDDVLDYGGVATDLGKNTGDDFREGKITLPVILAYEAG 261 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + EK FW+S + +G+ L KA ++ + L T RA +YG +A ++ LP S Sbjct: 262 SDEEKAFWRSAMEEGRNDDLALAKAVDLIDRHGTLKATIDRARAYGAEAYEAAASLPPSL 321 Query: 306 WKKSLMEVVDFCLQRL 321 +++L++VV+FC+ R+ Sbjct: 322 AREALLDVVEFCVARI 337 >gi|259415043|ref|ZP_05738965.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B] gi|259348953|gb|EEW60707.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B] Length = 336 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 148/322 (45%), Positives = 215/322 (66%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++L + ++E VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLA A M Y Sbjct: 15 ELLAETLASELEAVNLLIQERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYE 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F + Sbjct: 75 GDHHLKLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++T S L+ L+ + T+AEGE+ Q++ + +L TEE YL V++ KTA LFSAA EV Sbjct: 135 MVDTGSLRVLDILANASATIAEGEVLQMTAATDLRTTEEIYLQVVRGKTAALFSAATEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA ++ +AL YG LGIAFQ+ DD+LDY+G+ + GKN+G+DFR K TLPVI Sbjct: 195 GVIASATDAQVKALYDYGDALGIAFQIADDLLDYQGDTAKTGKNVGDDFRERKLTLPVIK 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T E+ FW+ TI G+ +L A +M + L T A+ + +KAK +L Sbjct: 255 AIAQATDEERAFWQRTIAKGRQEEGDLDHALELMAKYATLDATRADAFGWAEKAKSALAE 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD + L+++ D+ + RLN Sbjct: 315 LPDHPIRTMLIDLADYVVSRLN 336 >gi|254464181|ref|ZP_05077592.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I] gi|206685089|gb|EDZ45571.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I] Length = 328 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 151/322 (46%), Positives = 210/322 (65%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +ML +++E VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A M Y Sbjct: 7 EMLAATLSQELEAVNVLIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYE 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F + Sbjct: 67 GDHHVKLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET+S L+ L+ + T+AEGE+ Q++ + NL E YL V++ KTA LFSAA EV Sbjct: 127 MVETESLRVLDILANASATIAEGEVLQMTAASNLKTDEGIYLQVVRGKTAALFSAATEVG 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + +AL YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI Sbjct: 187 GVIAGAPETQVKALFEYGDALGIAFQIADDLLDYQGDSKATGKNVGDDFRERKLTLPVIK 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T E+ FW TI GK +L++A +M + L T A + KA+ +L Sbjct: 247 AVAQATDEERAFWTRTIEKGKQQDGDLEQALALMAKYGTLEATRQDALGWAAKARAALEV 306 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD + L ++ D+ + RLN Sbjct: 307 LPDHEIRTMLSDLADYVVARLN 328 >gi|295688727|ref|YP_003592420.1| trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756] gi|295430630|gb|ADG09802.1| Trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756] Length = 341 Score = 295 bits (756), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 212/319 (66%), Gaps = 5/319 (1%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----D 62 L DM VN LI +R+ SDV +IP + ++LI +GGKRLRP+LT+A A + G + Sbjct: 21 LAETDMAGVNRLITERMQSDVPIIPALAEHLIAAGGKRLRPLLTVAAARLAASDGAGSDN 80 Query: 63 NHVL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H L LA A+EFIHTATLLHDDVVD SALRRGKVAA L+WG SVLVGDFL ++AF ++ Sbjct: 81 DHCLKLAAAVEFIHTATLLHDDVVDGSALRRGKVAAHLIWGGAQSVLVGDFLFARAFELM 140 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +ET S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E + Sbjct: 141 VETNSMKALEILARASRVIAEGEVMQLMRSHDLNLSQALYLEIIQAKTAELFAAASEAGA 200 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + AGV + ALK+YG+NLG+AFQLVDD LDY G +GKN G+DFR GK TLP++LA Sbjct: 201 VSAGVDQTRADALKAYGLNLGLAFQLVDDALDYGGATETLGKNAGDDFREGKATLPLLLA 260 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 R RE FW+ + + + + ++A ++ AL T A Y KAK +L Sbjct: 261 IARSGPREAEFWERAVGRREQTEADFRRARELIIGTGALDATLDLATDYADKAKAALAIF 320 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + W++SL + DF + R Sbjct: 321 PANDWRESLESLADFAVSR 339 >gi|296535664|ref|ZP_06897840.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957] gi|296264015|gb|EFH10464.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957] Length = 347 Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 150/320 (46%), Positives = 204/320 (63%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L +D+E N I+ R+ S V++IP + +LI +GGKRLRP+L LA A + YR Sbjct: 26 LTALVSLVQEDLEACNREIIARMQSPVQLIPQLAAHLIAAGGKRLRPLLVLAAARLCGYR 85 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV LA +EFIHTATLLHDDVVD+S LRRG+ +A ++GN+ SVLVGDFL ++AF + Sbjct: 86 GQRHVGLAACVEFIHTATLLHDDVVDESDLRRGQASANAIFGNKASVLVGDFLFARAFQL 145 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S E L+ L + T+AEGE+ QL + + TE YL VI+ KTA LF+AA V Sbjct: 146 MTADGSLEVLDILCGASATIAEGEVLQLVIQNDTSSTEAQYLEVIEGKTAALFAAATRVG 205 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL++YG N GIAFQLVDD LDY E +GK +G+DFR GK TLPV+L Sbjct: 206 AVVAERPKAEADALEAYGRNFGIAFQLVDDALDYSAEQERLGKTVGDDFREGKITLPVLL 265 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF RG + EK FW+ + + + +L A +M +RA+ DT RA YG A L Sbjct: 266 AFARGDETEKTFWRRVLEEKRQEEGDLAHALSLMHRHRAIEDTIARARHYGDLALQGLAP 325 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 D K++L VV+FC+ R Sbjct: 326 FADGPEKQALAGVVEFCIAR 345 >gi|163745677|ref|ZP_02153037.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45] gi|161382495|gb|EDQ06904.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45] Length = 334 Score = 294 bits (753), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 150/313 (47%), Positives = 204/313 (65%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM+ V+ LI +R+ S IP+V +L+ +GGKRLRPMLTLA A M Y G HV LA Sbjct: 22 DMQAVSALIRERMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYGGPYHVHLAA 81 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+SA RRG+ A L+W NQ+SVLVGD+L +++F ++ E S Sbjct: 82 TVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNQSSVLVGDYLFARSFQLMTEPGSMPV 141 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + LS A T+AEGE+ QL+ ++NL E YL V++ KTA LFSAA EV +IAG Sbjct: 142 MRILSNAAATIAEGEVLQLTAAQNLATDEAVYLQVVRGKTAALFSAATEVGGVIAGASTD 201 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AL YG LGIAFQ+VDD+LDY+G+ GKN+G+DFR K TLPVI A + E Sbjct: 202 QVKALYDYGDALGIAFQIVDDLLDYQGDTGATGKNVGDDFRERKLTLPVIKAVAKADAEE 261 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI GK +L +A I+ ++ L T+ A+ + +KAK +L LPD K Sbjct: 262 RAFWVRTIEKGKQEDGDLDQALSILNKHATLAATQRDAHGWAEKAKAALAPLPDHDLKDM 321 Query: 310 LMEVVDFCLQRLN 322 L+++ D+ + R++ Sbjct: 322 LIDLADYVVSRIS 334 >gi|119384763|ref|YP_915819.1| trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222] gi|119374530|gb|ABL70123.1| Trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222] Length = 333 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 143/313 (45%), Positives = 214/313 (68%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM++VN LI +R+ S IP+V +L+ +GGKRLRPML LA A + Y G++H+LLA Sbjct: 21 DMDRVNALIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLVLAAARLCGYAGESHILLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F ++ +T+S + Sbjct: 81 AVEFIHTATLLHDDVVDESQQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMADTESMQV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + L+ + T+AEGE+ QL+ ++++ TE+ Y+ +++ KTA LFSAA E +++AG + Sbjct: 141 MRILANASATIAEGEVLQLTAAQDVSTTEDTYIQIVRGKTAALFSAATEAGAVVAGADPA 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V++AL YG LGIAFQ+VDD+LDY G + +GKN+G+DFR K TLPVI A R + E Sbjct: 201 VQRALFDYGDALGIAFQIVDDLLDYGGSTSSIGKNVGDDFRERKLTLPVIKAIARADEVE 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW+ TI G+ +L A I+R AL A ++ Q+AK +L+ PD ++ Sbjct: 261 RAFWERTIGQGQQDEADLATALEILRRREALEAARADAIAWAQRAKAALQAAPDQPLRRI 320 Query: 310 LMEVVDFCLQRLN 322 L ++ DF + RL+ Sbjct: 321 LADLADFVVSRLS 333 >gi|94497263|ref|ZP_01303835.1| Farnesyltranstransferase [Sphingomonas sp. SKA58] gi|94423368|gb|EAT08397.1| Farnesyltranstransferase [Sphingomonas sp. SKA58] Length = 378 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 150/315 (47%), Positives = 213/315 (67%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +L M +VN +IL R+ S + +IP++ +LI GGKRLRPMLTLA A ++ Y G H Sbjct: 62 NLVADGMNQVNAVILDRMQSRIPLIPELAGHLIAGGGKRLRPMLTLACADLVGYAGARHY 121 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA A+EFIHTATLLHDDVVD S +RRG+ A ++WGN SVLVGDFL S++F +++E + Sbjct: 122 KLAAAVEFIHTATLLHDDVVDGSGMRRGRKTANIIWGNSASVLVGDFLFSRSFELMVEAE 181 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S + L+ LS + +AEGE+ QL+ + +D +EE YL +I +KTA LF+AA +S+++A Sbjct: 182 SLKVLKILSGASAVIAEGEVNQLTAQRKIDTSEEQYLDIIGAKTAALFAAACRISAVVAD 241 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + QAL YG NLGIAFQL+DD +DY + MGK+ G+DFR+GK TLPVILA+ RG Sbjct: 242 RSEAEEQALDVYGRNLGIAFQLIDDAIDYESDEATMGKDAGDDFRDGKVTLPVILAYARG 301 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 ++ ++ FWK+ I ++S +L A ++R+ A+ DT RA YGQ+A D+L Sbjct: 302 SEADRAFWKAAIAGHRVSDADLAHATGLLRQTGAIADTLARARHYGQRAIDALGMFDAGR 361 Query: 306 WKKSLMEVVDFCLQR 320 K +L E V+F + R Sbjct: 362 AKAALTEAVEFAIAR 376 >gi|260429621|ref|ZP_05783598.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45] gi|260420244|gb|EEX13497.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45] Length = 333 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 151/319 (47%), Positives = 213/319 (66%), Gaps = 1/319 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L +L +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA+A + Y G Sbjct: 14 LAELLSEDMGGVNALIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLASARLCGYEGP 73 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 HV LA +EFIHTATLLHDDVVD+S+ RRG+ A L+W N++SVLVGD+L +++F +++ Sbjct: 74 YHVHLAATVEFIHTATLLHDDVVDESSQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMV 133 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E + L LS A T+AEGE+ QL+ +++L TE+ YL V++ KTA LFSAA EV + Sbjct: 134 EPGNLRVLNILSNAAATIAEGEVLQLTAAQDLKTTEDIYLQVVRGKTAALFSAATEVGGV 193 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 IAGV QAL +YG LGIAFQ+ DD+LDY+G+ + GKN+G+DFR K TLP+I A Sbjct: 194 IAGVPEEQVQALFTYGDALGIAFQIADDLLDYQGDSSATGKNVGDDFRERKLTLPLIKAV 253 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 R + E+ FW TI G +L+ A ++ + AL DT A ++ +KAKD++ LP Sbjct: 254 ARASDEERAFWVRTIEKGDQRDGDLEHALELLNAHAALEDTRTDALAWAEKAKDAMTELP 313 Query: 303 DSSWKKSLMEVVDFCLQRL 321 S + L+++ DF + RL Sbjct: 314 QSELRDLLIDLADFVVARL 332 >gi|56695234|ref|YP_165582.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3] gi|56676971|gb|AAV93637.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3] Length = 332 Score = 292 bits (747), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 147/322 (45%), Positives = 213/322 (66%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +ML ++M VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y+ Sbjct: 11 EMLAATLSQEMAAVNALIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYQ 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F + Sbjct: 71 GEDHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET S L+ L+ A T+AEGE+ Q++ + +L E YL V++ KTA LFSAA EV Sbjct: 131 MVETGSLRVLDILANAAATIAEGEVLQMTAASDLRTDESVYLQVVRGKTAALFSAATEVG 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAGV + +AL YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI Sbjct: 191 GVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIK 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T E+ FW TI GK + +L++A +M + L T A+++ +KA+ +L Sbjct: 251 AVAQATDEERAFWVRTIEKGKQAEGDLEQALALMEKYGTLAATRADAHAWAEKARTALEL 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+ + L ++ D+ + RL+ Sbjct: 311 LPNHEIRTMLSDLADYVVARLS 332 >gi|126740547|ref|ZP_01756234.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6] gi|126718348|gb|EBA15063.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6] Length = 332 Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 146/313 (46%), Positives = 206/313 (65%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +ME VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A + Y G++H+ LA Sbjct: 20 EMEAVNSLIQTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYEGEHHIKLAA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +++ET S + Sbjct: 80 TVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLKV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ + T+AEGE+ Q++ + NL E YL V++ KTA LFSAA EV +IAG + Sbjct: 140 LDILANASATIAEGEVLQMTAASNLATDEAVYLQVVRGKTAALFSAATEVGGVIAGASET 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AL YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI A + T E Sbjct: 200 EIKALFDYGDALGIAFQIADDLLDYQGDSKATGKNVGDDFRERKLTLPVIKAVAQATDEE 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 FW TI G+ +L++A +M + + L T A ++ KA D+L LP+ ++ Sbjct: 260 HAFWTRTIEKGRQEEGDLEQALALMAKYQTLEATRQDALNWAAKATDALTALPEHPIRQM 319 Query: 310 LMEVVDFCLQRLN 322 L ++ D+ + RLN Sbjct: 320 LHDLADYVVSRLN 332 >gi|332188683|ref|ZP_08390398.1| polyprenyl synthetase family protein [Sphingomonas sp. S17] gi|332011300|gb|EGI53390.1| polyprenyl synthetase family protein [Sphingomonas sp. S17] Length = 336 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 146/314 (46%), Positives = 214/314 (68%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN +I+ R+ S++ +IP + +LI GGKR+RPMLTLA+A +L YRG +H + Sbjct: 21 LVADDMNAVNQVIIDRMRSEIPLIPQLAGHLISGGGKRMRPMLTLASAQLLGYRGTSHHV 80 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S++F ++++ S Sbjct: 81 LAAAVEFIHTATLLHDDVVDGSDLRRGRRTANIIWGNPASVLVGDFLFSRSFQLMVDAGS 140 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L LS + +AEGE+ QL+ + + + EE YL +I +KTA LF+AA +++++A Sbjct: 141 LKVLNILSGASAVIAEGEVNQLTAVRQVGLPEERYLSIIDAKTAALFAAACRIAAVVAER 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + AL++YG NLGIAFQL+DD +DY + MGK+ G+DFR GK TLPVILA+ RG Sbjct: 201 PEAEELALEAYGRNLGIAFQLIDDAIDYVSDAGTMGKDAGDDFREGKMTLPVILAYARGN 260 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + E+ FWK + + S ++ +A ++R++RA+ DT RA YG A +++R D Sbjct: 261 EEERAFWKDAVEGRRTSDQDFTRAIALVRKSRAVDDTMARARHYGGLAIEAIRGFADGPA 320 Query: 307 KKSLMEVVDFCLQR 320 K +++E V+F + R Sbjct: 321 KAAMIEAVEFAVAR 334 >gi|149187005|ref|ZP_01865313.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21] gi|148829394|gb|EDL47837.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21] Length = 338 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 149/314 (47%), Positives = 213/314 (67%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT + M VN +IL R+ S+V +IP + +LI GGKRLRPMLTLA A ++ Y G H Sbjct: 23 LTAQGMNAVNQVILDRMQSEVPLIPALAGHLISGGGKRLRPMLTLAGAELVGYSGTRHHK 82 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRGK AA +++GN +VLVGDFL S++F ++ E S Sbjct: 83 LAAAVEFIHTATLLHDDVVDGSDLRRGKAAANIIFGNPATVLVGDFLFSRSFELMTEDGS 142 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ LS + +AEGE+ QL+ + +D +E+ YLH+I++KTA LF+AA +++++A Sbjct: 143 LKVLKILSGASAIIAEGEVDQLTAQRKIDTSEQRYLHIIRAKTAALFAAASRIAAVVAEC 202 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 Q+L YG NLG+AFQLVDD LDY + EMGK+ G+DFR GK TLPVILA+ RG+ Sbjct: 203 SEEEEQSLDEYGRNLGVAFQLVDDALDYDSDAAEMGKDRGDDFREGKMTLPVILAYARGS 262 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + E+ FWK+ I + S +L +A ++ + A+ DT+ RA + Q+A D+L PD Sbjct: 263 EEEREFWKAAIAGFRTSDSDLDEAIRLIEVHNAVADTKARARHFAQRAIDALSIFPDGKA 322 Query: 307 KKSLMEVVDFCLQR 320 ++++ + F + R Sbjct: 323 RRAMTQAALFAVSR 336 >gi|85373560|ref|YP_457622.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis HTCC2594] gi|84786643|gb|ABC62825.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis HTCC2594] Length = 340 Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 151/314 (48%), Positives = 209/314 (66%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT M VN +IL R+ S++ +IP + +LI GGKRLRPMLTLA A ++ Y+G H Sbjct: 25 LTASGMNAVNTVILDRMQSEIPLIPRLAGHLISGGGKRLRPMLTLAGAELVGYQGSRHHK 84 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S +RRGK AA +++GN +VLVGDFL S+AF ++ E S Sbjct: 85 LAAAVEFIHTATLLHDDVVDGSEMRRGKAAANIIFGNPATVLVGDFLFSRAFELMTEDGS 144 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ LS + +AEGE+ QLS + L+ +EE YL +I +KTA LF+AA +S+++A Sbjct: 145 LRVLKILSNASAVIAEGEVAQLSAQRKLETSEERYLDIIGAKTAALFAAASRISAVVAEC 204 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +S +AL YG NLG+AFQLVDD +DY + EMGK+ G+DFR GK TLPVILA+ RG Sbjct: 205 DDSHERALDDYGRNLGVAFQLVDDAIDYDSDAAEMGKDQGDDFREGKMTLPVILAYARGN 264 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + E+ FWK I + S +L A ++ + AL DT RA + ++A D++ PDS Sbjct: 265 EDERAFWKDAIGGHRASDADLAHAITLIGRHNALEDTRTRARHFARRAIDAISIFPDSKA 324 Query: 307 KKSLMEVVDFCLQR 320 ++++ E F + R Sbjct: 325 RQAMAEAALFAVAR 338 >gi|99078713|ref|YP_611971.1| farnesyltranstransferase [Ruegeria sp. TM1040] gi|99035851|gb|ABF62709.1| Farnesyltranstransferase [Ruegeria sp. TM1040] Length = 336 Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 146/322 (45%), Positives = 211/322 (65%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++L + ++E VN LI +R+ S IP+V +L+ +GGKRLRPMLTLA A M Y Sbjct: 15 ELLAETLAPELEAVNLLIRERMASQHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYE 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F + Sbjct: 75 GEHHLKLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++T S L+ L+ + T+AEGE+ Q++ + +L TEE YL V++ KTA LFSAA EV Sbjct: 135 MVDTGSLRVLDILANASATIAEGEVLQMTAATDLGTTEEIYLQVVRGKTAALFSAATEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + +AL YG LGIAFQ+ DD+LDY+G+ + GKN+G+DFR K TLPVI Sbjct: 195 GVIAGASEAQVKALFDYGDALGIAFQIADDLLDYQGDTAKTGKNVGDDFRERKLTLPVIK 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + E+ FW TI G+ +L+ A +M + L T A + KAK +L Sbjct: 255 AIAQAGDEERAFWHRTIAKGRQEEGDLEHALSLMAKYATLEATRADAIGWADKAKSALAD 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+ + L+++ D+ + RLN Sbjct: 315 LPEHPIRTLLIDLADYVVSRLN 336 >gi|20429105|emb|CAD24417.1| decaprenyl diphosphate synthase [Paracoccus zeaxanthinifaciens] Length = 333 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 149/313 (47%), Positives = 204/313 (65%), Gaps = 1/313 (0%) Query: 10 KDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +ME VN LI +R+ S IP+V +LI +GGKRLRPMLTLA A +L Y G HV LA Sbjct: 20 PEMEAVNALIRERMASRHAPRIPEVTAHLIEAGGKRLRPMLTLAAAKLLGYGGPYHVHLA 79 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F +++E S Sbjct: 80 ATVEFIHTATLLHDDVVDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVEPGSMR 139 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 LE LS A T+AEGE+ QL+ +++L E+ YL V++ KTA LFSAA EV +IAGV + Sbjct: 140 TLEILSNAAATIAEGEVLQLTAAQDLATNEDIYLQVVRGKTAALFSAATEVGGVIAGVPD 199 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + +AL YG LGIAFQ+VDD+LDY G + KN G+DFR K TLPVI A R T Sbjct: 200 AQVRALFDYGDALGIAFQIVDDLLDYGGTAEAIDKNTGDDFRERKLTLPVIKAVARATPE 259 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E+ FW TI G +L+ A ++ + A+ D A + +A+ SL+ LP+ + Sbjct: 260 ERAFWSRTIEKGDQKDGDLEHALELLARHGAMADARRDALDWAARARASLQILPEHPIRD 319 Query: 309 SLMEVVDFCLQRL 321 L ++ DF ++R+ Sbjct: 320 MLSDLADFVVERI 332 >gi|167647338|ref|YP_001685001.1| polyprenyl synthetase [Caulobacter sp. K31] gi|167349768|gb|ABZ72503.1| Polyprenyl synthetase [Caulobacter sp. K31] Length = 322 Score = 289 bits (739), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 205/320 (64%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L L DM V+ LI R+ S+V +IP + ++LI +GGKRLRP+LT+ATA + Sbjct: 1 MDRLVRLAAADMAGVDALITARMQSEVPVIPALAEHLIAAGGKRLRPLLTVATARLAGSD 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF + Sbjct: 61 NAACLKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGAAQSVLVGDFLFARAFEL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET S ALE L+ + +AEGE+ QL+ S +L++++ YL +I +KTA LF+AA E Sbjct: 121 MVETSSMRALEILAKASRVIAEGEVLQLTRSHDLNLSQALYLEIIAAKTAELFAAASEAG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + AGV +AL++YGMNLG+AFQL DD LDY G +GKN G+DFR GK TLP++L Sbjct: 181 GVSAGVSADKSEALRAYGMNLGLAFQLADDALDYGGTTEALGKNAGDDFREGKATLPLLL 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A R RE FW+ I + + + ++A ++ AL T A Y KAK +L Sbjct: 241 AIARSGPREAEFWERAIGRREQTEADFRRARELIVGTGALEATLDLASEYADKAKLALAS 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P + W+ SL + DF + R Sbjct: 301 FPANDWRASLESLADFAVSR 320 >gi|87199374|ref|YP_496631.1| farnesyltranstransferase [Novosphingobium aromaticivorans DSM 12444] gi|87135055|gb|ABD25797.1| Farnesyltranstransferase [Novosphingobium aromaticivorans DSM 12444] Length = 337 Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 147/314 (46%), Positives = 206/314 (65%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L + M VN +IL R+ S + +IP + +LI GGKR+RPMLTLA+A +L Y G H Sbjct: 22 LVAEGMNSVNAVILDRMQSRIPLIPTLAGHLIAGGGKRMRPMLTLASAALLGYGGSRHYK 81 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S +RRGK A +V+GN +VLVGDFL S++F +++E S Sbjct: 82 LAAAVEFIHTATLLHDDVVDGSDMRRGKKTANIVYGNPATVLVGDFLFSRSFELMVEDGS 141 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L LS + ++EGE+ QL + +D TEE YL +I +KTA LFSAA +++++A Sbjct: 142 LKVLRILSNASAVISEGEVDQLVAQRQIDTTEEMYLDIIAAKTAALFSAACRIAAVVAER 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ AL +YG NLGIAFQL DD +DY + EMGK+ G+DFR GK TLPVILA+ RG Sbjct: 202 PDADELALDAYGRNLGIAFQLADDAIDYDSDAAEMGKDQGDDFREGKMTLPVILAYARGD 261 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + E+ FW+ I + S +L A ++R + A+ T RA Y Q+A D++ P S+ Sbjct: 262 EEERGFWQQAIAGERSSDADLAHAISLIRRHDAVHATRERARMYAQRAIDAISGFPASAA 321 Query: 307 KKSLMEVVDFCLQR 320 K ++ E +F + R Sbjct: 322 KAAMTEAAEFAVAR 335 >gi|83854856|ref|ZP_00948386.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1] gi|83842699|gb|EAP81866.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1] Length = 332 Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 147/313 (46%), Positives = 206/313 (65%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y G HV LA Sbjct: 20 DMTAVNDLIRDRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYDGPYHVHLAA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F ++ ET + Sbjct: 80 TVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTETNNMRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L L+ + T+AEGE+ QL+ ++NL E YL V++ KTA LFSAA +V +IA ++ Sbjct: 140 LAILANASATIAEGEVLQLTAAQNLATDEGIYLQVVRGKTAALFSAATQVGGVIAAAPDA 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 QAL YG LGIAFQ+VDD+LDY+G+ N GKNIG+DFR K TLPVI A +G E Sbjct: 200 QVQALFDYGDALGIAFQIVDDLLDYQGDPNATGKNIGDDFRERKLTLPVIKAIAKGDATE 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI GK +L+ A ++ + L +T+ A ++ ++AK +L LPD + Sbjct: 260 RAFWTRTIEKGKQEDGDLEHALSLLNAHGTLDETKAEALAWAEQAKTALNTLPDHELTQM 319 Query: 310 LMEVVDFCLQRLN 322 L ++ D+ + R++ Sbjct: 320 LRDLADYVVARIS 332 >gi|83941379|ref|ZP_00953841.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36] gi|83847199|gb|EAP85074.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36] Length = 332 Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 147/313 (46%), Positives = 206/313 (65%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y G HV LA Sbjct: 20 DMTAVNDLIRDRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYDGPYHVHLAA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F ++ ET + Sbjct: 80 TVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTETNNMRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L L+ + T+AEGE+ QL+ ++NL E YL V++ KTA LFSAA +V +IA ++ Sbjct: 140 LAILANASATIAEGEVLQLTAAQNLATDEGIYLQVVRGKTAALFSAATQVGGVIATAPDA 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 QAL YG LGIAFQ+VDD+LDY+G+ N GKNIG+DFR K TLPVI A +G E Sbjct: 200 QVQALYDYGDALGIAFQIVDDLLDYQGDPNATGKNIGDDFRERKLTLPVIKAIAKGDAAE 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI GK +L+ A ++ + L +T+ A ++ ++AK +L LPD + Sbjct: 260 RAFWTRTIEKGKQEDGDLEHALSLLNAHGTLDETKAEALAWAEQAKTALNTLPDHDLTQM 319 Query: 310 LMEVVDFCLQRLN 322 L ++ D+ + R++ Sbjct: 320 LRDLADYVVARIS 332 >gi|254488187|ref|ZP_05101392.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101] gi|214045056|gb|EEB85694.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101] Length = 332 Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 149/322 (46%), Positives = 208/322 (64%), Gaps = 2/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +M E L + DM VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y Sbjct: 12 RMAEYLAV-DMAAVNTLIRDRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYD 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F + Sbjct: 71 GPYHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + ET + L LS + T+AEGE+ QL+ ++NL E YL V++ KTA LFSAA EV Sbjct: 131 MTETNNMRVLAILSNASATIAEGEVLQLTAAQNLATDESVYLQVVRGKTAALFSAATEVG 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG ++ QAL +G LGIAFQ+VDD+LDY+G+ + GKNIG+DFR K TLPVI Sbjct: 191 GVIAGAPDAQVQALFDFGDALGIAFQIVDDLLDYQGDASATGKNIGDDFRERKLTLPVIK 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A R E FW TI G+ +L+ A ++ ++ + T A ++ +AK +L Sbjct: 251 AVARADAEEHAFWTRTIEKGRQEDGDLEHALSLLHKHDTMTQTRAEAVAWANRAKAALDA 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+ + L ++ D+ + R+N Sbjct: 311 LPEHGVRDMLRDLADYVVARIN 332 >gi|329848574|ref|ZP_08263602.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] gi|328843637|gb|EGF93206.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] Length = 339 Score = 288 bits (736), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 149/317 (47%), Positives = 205/317 (64%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L +LT DM KVN LI R+ S+V +IP + +LI +GGKRLRP+L +A A + E R DN Sbjct: 21 LVNLTAADMVKVNSLITARMQSEVAVIPALADHLIAAGGKRLRPLLCVAAARLCEVRNDN 80 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H L+ A+EFIHTATLLHDDVVD S+LRRGKVAA L+WG +SVLVGDFL ++AF +++E Sbjct: 81 HHKLSAAVEFIHTATLLHDDVVDSSSLRRGKVAAHLIWGAPSSVLVGDFLFARAFELMVE 140 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 T S AL+ LS + + +GE+ QL + +L++++ DY+ +I SKTA LFSAA E ++ Sbjct: 141 TGSLRALDILSKASAVITQGEVLQLMKAFDLNLSQADYIEIISSKTAALFSAASESGAVA 200 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG AL SYG+NLG+AFQ+ DDVLDY+G+ ++GKN G+DF GK TLP+ILA Q Sbjct: 201 AGASEDKITALYSYGLNLGLAFQIQDDVLDYQGDAADLGKNAGDDFAEGKSTLPLILAMQ 260 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + FW TI + K + A +M + AL A +Y KA+ SL Sbjct: 261 ATKGTQDAFWARTIGERKQQDGDFAMAQDLMVSSGALDQARALARAYADKARASLSLFEP 320 Query: 304 SSWKKSLMEVVDFCLQR 320 W+ +L + + + R Sbjct: 321 GPWRTALENLALYSVDR 337 >gi|114766799|ref|ZP_01445733.1| decaprenyl diphosphate synthase [Pelagibaca bermudensis HTCC2601] gi|114540993|gb|EAU44051.1| decaprenyl diphosphate synthase [Roseovarius sp. HTCC2601] Length = 331 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 150/312 (48%), Positives = 206/312 (66%), Gaps = 1/312 (0%) Query: 11 DMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM+ VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA+A + Y G HV LA Sbjct: 19 DMDGVNALIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLASARLCGYEGPFHVHLAA 78 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L ++AF +++E + Sbjct: 79 TVEFIHTATLLHDDVVDESKQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPGNLRV 138 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L LS A T+AEGE+ QL+ +++L E+ YL V++ KTA LFSAA EV +IAGV+ Sbjct: 139 LNILSNAAATIAEGEVLQLTAAQDLRTNEDIYLQVVRGKTAALFSAATEVGGVIAGVEEE 198 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 QAL YG LGIAFQ+VDD+LDY+G+ + GKN+G+DFR K TLPVI A E Sbjct: 199 QVQALFDYGDALGIAFQIVDDLLDYQGDSSATGKNVGDDFRERKLTLPVIKAIAAADDEE 258 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FWK TI G +L+ A ++ ++ AL T A ++ KAK S+ LP S + Sbjct: 259 RAFWKRTIEKGDQQDGDLEHALALLNKHGALDATRADAQAWTDKAKASMEKLPQSELRDL 318 Query: 310 LMEVVDFCLQRL 321 L+E+ DF + R+ Sbjct: 319 LVELADFVVSRV 330 >gi|83594282|ref|YP_428034.1| farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170] gi|83577196|gb|ABC23747.1| Farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170] Length = 360 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 144/312 (46%), Positives = 209/312 (66%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+++VN +I++R+ S + +IP + ++I +GGKRLRP+LTLA+A + Y G+ H LA Sbjct: 47 DLKRVNEIIVERMHSPIALIPQLAGHIIAAGGKRLRPLLTLASARLCGYEGERHAQLAAC 106 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ +A +WGN+ SVLVGDFL S++F +++E + L Sbjct: 107 VEFIHTATLLHDDVVDESLLRRGRDSANALWGNKASVLVGDFLFSRSFELMVEDGVLKVL 166 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS + +AEGE+ QL + ++ TE YL VI+ KTA LF+AA + +++A + Sbjct: 167 GILSHASRVIAEGEVAQLITANDMATTEAQYLEVIRGKTAQLFAAACRIGAVVAERPEAE 226 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL +YGM LGIAFQLVDD LDY ++GK +G+DF +GK TLPVILA+QRGT E+ Sbjct: 227 EEALDTYGMTLGIAFQLVDDYLDYSARQQDLGKTVGDDFMDGKITLPVILAYQRGTDDER 286 Query: 251 NFWKSTI--NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 FW+ + D ++L KA +M L +T RA YG++A+ +L D K Sbjct: 287 AFWRRCMEAQDMAEPEKDLAKAIELMTRYGTLAETVERARHYGERARSALDIFADGPAKA 346 Query: 309 SLMEVVDFCLQR 320 +L +VDFC++R Sbjct: 347 ALAGIVDFCIER 358 >gi|254462754|ref|ZP_05076170.1| geranylgeranyl pyrophosphate synthase [Rhodobacterales bacterium HTCC2083] gi|206679343|gb|EDZ43830.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium HTCC2083] Length = 333 Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 145/313 (46%), Positives = 207/313 (66%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 D+ VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y G HV LA Sbjct: 21 DLNAVNVLIQQRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYDGPYHVHLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +++ET S Sbjct: 81 TVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSMRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ + T+AEGE+ QL+ S++L TE YL V++ KTA LFSAA EV +IAG + Sbjct: 141 LDILANASATIAEGEVLQLTASQDLSTTEAIYLQVVRGKTAALFSAATEVGGVIAGADEA 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AL YG LGIAFQ+VDD+LD G+ +GKNIG+DFR K TLP+I A + E Sbjct: 201 HVKALFDYGDALGIAFQIVDDLLDMSGDAGAIGKNIGDDFREKKLTLPLIKAIAKADAEE 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW+ TI G+ +L+ A ++ ++ AL DT A ++ +KA ++ LP ++ Sbjct: 261 RAFWERTIEKGRQEDGDLETAIALLHKHGALDDTRDEALAWAEKAVKAIDYLPAHPVREM 320 Query: 310 LMEVVDFCLQRLN 322 L ++ D+ + R+N Sbjct: 321 LRDLADYVVARIN 333 >gi|114771291|ref|ZP_01448711.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha proteobacterium HTCC2255] gi|114548216|gb|EAU51103.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha proteobacterium HTCC2255] Length = 329 Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 148/313 (47%), Positives = 206/313 (65%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM KVN LI KR+ SD IP+V ++LI +GGKRLRP+LTLA A M H+ LA Sbjct: 17 DMVKVNSLIKKRMASDAAPRIPEVTEHLIDAGGKRLRPLLTLAAAEMCGNTSPYHIHLAA 76 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S RRG+ A L+W NQ+SVLVGD+L S++F +++ET + Sbjct: 77 TVEFIHTATLLHDDVVDESKQRRGRPTANLLWDNQSSVLVGDYLFSRSFQLMVETGNLRV 136 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ + T+AEGE+ QL++++NL TE+ YL VI+ KTA LF AA +V +I+ + Sbjct: 137 LDILANASATIAEGEVLQLTVAQNLSTTEDTYLKVIRGKTAALFGAACKVGGVISNAEEK 196 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + AL SYG LG+ FQ+ DD+LDY G ++GK+IG+DFR K +LP+I ++ E Sbjct: 197 IIDALASYGDALGVCFQITDDLLDYNGSSADLGKSIGDDFRERKMSLPLIKVLKKSDVTE 256 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 K FWK TI G ++L A +M ++ AL DT A + +KAK S+ LP S + Sbjct: 257 KEFWKRTIEKGDQQDDDLDFALKLMTKHNALKDTHNDAKFWAEKAKKSISILPKSKLRNI 316 Query: 310 LMEVVDFCLQRLN 322 L E+ DF + RL+ Sbjct: 317 LTELPDFVVNRLS 329 >gi|163741857|ref|ZP_02149247.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10] gi|161385030|gb|EDQ09409.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10] Length = 332 Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 146/316 (46%), Positives = 203/316 (64%), Gaps = 2/316 (0%) Query: 8 TLKD-MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 TL D M VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A + Y GDNHV Sbjct: 16 TLSDEMAAVNTLIQTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYSGDNHV 75 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F +++ET Sbjct: 76 KLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETG 135 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L+ L+ + T+AEGE+ Q++ + +L EE YL V++ KTA LFSAA + ++A Sbjct: 136 SLRVLDILANASATIAEGEVLQMTAASDLATDEEIYLQVVRGKTAALFSAATQAGGVVAN 195 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + AL +YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI A + Sbjct: 196 APETQIDALFAYGDALGIAFQIADDLLDYQGDSAATGKNVGDDFRERKLTLPVIKAVAQA 255 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T E+ FW TI G+ +L A +M + L T + A + KA+D+L LPD Sbjct: 256 TAEERGFWVRTIEKGRQDEGDLDHALALMDKYGTLTATRHDAMDWVGKAQDALTALPDDP 315 Query: 306 WKKSLMEVVDFCLQRL 321 ++ L ++ D+ + RL Sbjct: 316 IRQMLHDLADYVVARL 331 >gi|260431561|ref|ZP_05785532.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis ITI-1157] gi|260415389|gb|EEX08648.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis ITI-1157] Length = 332 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 210/320 (65%), Gaps = 1/320 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L +L +M+ VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y GD Sbjct: 13 LAELLAGEMDAVNTLIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLFGYGGD 72 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +H+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L S++F +++ Sbjct: 73 HHIRLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMV 132 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 ET S L+ L+ + T+AEGE+ Q++ + +L E YL V++ KTA LFSAA EV + Sbjct: 133 ETGSLRVLDILANASATIAEGEVLQMTAATDLRTDEAVYLQVVRGKTAALFSAATEVGGV 192 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 IAG +AL +YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI A Sbjct: 193 IAGASEEQVRALFAYGDALGIAFQIADDLLDYQGDSKATGKNVGDDFRERKLTLPVIKAV 252 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + T E+ FW+ TI G+ +L+ A +MR+ R L T A + KAK +L LP Sbjct: 253 AQATPEERAFWERTIEKGRQQEGDLEHALGLMRKYRTLEATRADALGWAAKAKAALAVLP 312 Query: 303 DSSWKKSLMEVVDFCLQRLN 322 D + L ++ D+ + RLN Sbjct: 313 DHEIRDLLRDMADYVVARLN 332 >gi|307824936|ref|ZP_07655158.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96] gi|307733983|gb|EFO04838.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96] Length = 336 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 150/317 (47%), Positives = 203/317 (64%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ LT + + V+ LI+ + SDV +I + Y++ SGGKRLRPML L A L DN Sbjct: 20 IKKLTTAEAKAVDQLIINELSSDVVLINQMGHYIVGSGGKRLRPMLLLLAAKALGGANDN 79 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+L+A IEFIHTATLLHDDVVDDS LRRGK +A VWGN S+LVGD+L S AF M++ Sbjct: 80 HLLMAAVIEFIHTATLLHDDVVDDSDLRRGKESANAVWGNAASILVGDYLYSSAFEMMVR 139 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 T + +E LS +AEGE+ QL N + TE+ YL VI KTA+LFSAA +++++I Sbjct: 140 TGNMRVMEILSKTTTAIAEGEVLQLLNCNNPETTEQKYLEVIARKTAILFSAATKLAAVI 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG Q L YG +LGIAFQL+DD LDY+ +E+GKN+G+D GKPTLP+I A Q Sbjct: 200 AGASTETEQGLSLYGQHLGIAFQLIDDALDYKASKDELGKNLGDDLAEGKPTLPLIYAIQ 259 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G++ E I +G V N + + I++ +A+ TE RA QKA +L LPD Sbjct: 260 NGSESEAKIIIDAIKNGDRDVFN--EVYAIVQSTKAIDYTEQRADEEAQKAISALSVLPD 317 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L + F +QR Sbjct: 318 SEYKQALTLLAMFSVQR 334 >gi|149378271|ref|ZP_01895982.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893] gi|149357436|gb|EDM45947.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893] Length = 322 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 145/317 (45%), Positives = 202/317 (63%), Gaps = 2/317 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D D +VN LI+KR+ SDV ++ + +Y+I SGGKRLRP+L L ++ L Y D H+ Sbjct: 8 DTVADDFSRVNDLIIKRLSSDVPLVEKIAQYIIESGGKRLRPLLVLLSSRALGYNKDEHL 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL ++AF M++E + Sbjct: 68 KLAAVIEFLHTATLLHDDVVDTSDMRRGRSTANARWGNAPSVLVGDFLYARAFEMMVELQ 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + + ++ LS +AEGE+ QL KN DV+E+ Y+ VI +KTA+LF AA +L+AG Sbjct: 128 NLKIMDVLSHATAVIAEGEVLQLMNVKNPDVSEDKYMEVIHNKTAMLFEAASHTGALLAG 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 S QAL +YG +LG+AFQLVDDVLDYRG+ MGKN+G+D GKPTLP+I A G Sbjct: 188 ANGSQEQALSAYGKHLGLAFQLVDDVLDYRGDAEAMGKNVGDDLAEGKPTLPLIYAMANG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + EK + + G +++L + I+ + AL T RA + A D L LP+S Sbjct: 248 SDDEKQLIRQAVRKG--GLDDLARILDIVNRSGALEYTMERAKGEAKAALDCLETLPESD 305 Query: 306 WKKSLMEVVDFCLQRLN 322 + +L + D + R++ Sbjct: 306 HRNALALLTDVAVARVS 322 >gi|86139019|ref|ZP_01057590.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193] gi|85824250|gb|EAQ44454.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193] Length = 332 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 146/317 (46%), Positives = 206/317 (64%), Gaps = 2/317 (0%) Query: 8 TLKD-MEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 TL D ME VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y G +HV Sbjct: 16 TLSDEMEAVNTLIQTRMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAARLCGYEGAHHV 75 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +++ET Sbjct: 76 KLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETG 135 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S + L+ L+ + T+AEGE+ Q++ + NL E YL V++ KTA LFSAA +V +IA Sbjct: 136 SLQVLDILANASATIAEGEVLQMTAASNLATDEAVYLQVVRGKTAALFSAATQVGGVIAA 195 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + + L YG LGIAFQ+ DD+LDY+G+ GKNIG+DFR K TLPVI A + Sbjct: 196 APETQIKGLFDYGDALGIAFQIADDLLDYQGDAATTGKNIGDDFRERKLTLPVIKAVAQA 255 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T E+ FW TI G+ +L++A +M + L T A + +KA ++L LPD Sbjct: 256 TDEERAFWIRTIEKGQQQEGDLEQALALMAKYGTLEATRQDALLWAEKATEALSALPDHP 315 Query: 306 WKKSLMEVVDFCLQRLN 322 ++ L ++ ++ + RL+ Sbjct: 316 IRQMLHDLAEYVVSRLH 332 >gi|326385511|ref|ZP_08207150.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM 19370] gi|326210050|gb|EGD60828.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM 19370] Length = 337 Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 139/314 (44%), Positives = 201/314 (64%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L M VN +IL R+ S + +IP + +LI GGKR+RPMLTLA A ++ Y G H Sbjct: 22 LVADGMNSVNAVILDRMQSRIPLIPALAGHLIAGGGKRMRPMLTLAGAELVGYGGSRHYK 81 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S +RRGK AA +++GN +VLVGDFL S++F +++E S Sbjct: 82 LAAAVEFIHTATLLHDDVVDGSDMRRGKKAANIIYGNPATVLVGDFLFSRSFELMVEDGS 141 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L LS + + EGE+ QL + ++ +EE YL +I KTA LF+AA +++++A Sbjct: 142 IKVLRILSNASAIITEGEVDQLIAQREIETSEERYLAIINGKTAALFAAACRIAAVVAER 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 AL +YG +LG AFQL DD +DY + + MGK+ G+DFR GK TLPVILA+ RG Sbjct: 202 PEDEELALDAYGRHLGTAFQLADDAIDYDSDADVMGKDKGDDFREGKMTLPVILAYARGN 261 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW+ I + +L A ++R++ A++ T RA Y Q+A D++ P S+ Sbjct: 262 AEEREFWRRAIAGERNGEADLAHAIELIRKHDAVLATRERARHYAQRAIDAIASFPASAA 321 Query: 307 KKSLMEVVDFCLQR 320 K +++E +F + R Sbjct: 322 KSAMIEAAEFAVAR 335 >gi|114570734|ref|YP_757414.1| trans-hexaprenyltranstransferase [Maricaulis maris MCS10] gi|114341196|gb|ABI66476.1| Trans-hexaprenyltranstransferase [Maricaulis maris MCS10] Length = 340 Score = 282 bits (721), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 147/319 (46%), Positives = 214/319 (67%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + L L DM +V+ LIL+R+ S VE+IP++ +YLI +GGKR+RPM+T+A A M+ + Sbjct: 20 EALARLAHDDMRRVDALILERLDSHVELIPELARYLIEAGGKRVRPMITVAAANMIGHSD 79 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + LA A+EFIHTATLLHDDVVD+S +RRGK AA LVWGN +SVLVGDFL +++F ++ Sbjct: 80 IAPLKLAAAVEFIHTATLLHDDVVDESGMRRGKAAANLVWGNASSVLVGDFLFARSFSLM 139 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S AL LS A T+AEGE+RQLS K++ V+ E Y+ +I +KTA LF+AA +VS Sbjct: 140 VEAGSMRALGVLSDAASTIAEGEVRQLSAVKDVGVSVETYMQIIDAKTAALFAAAAQVSG 199 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A + AL++YG LG+AFQLVDD LDY G ++GK+ G+DFR GK TLPV LA Sbjct: 200 IVADRPANEETALETYGRELGLAFQLVDDALDYSGASAKLGKSTGDDFREGKVTLPVALA 259 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + E FW I G+ + ++A ++ + AL T +A ++ ++A+++L Sbjct: 260 IAAASTEETAFWDRVIARGEQVEGDFERAISLVNTHGALAATVTQARNHARRAREALAIF 319 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + W+ +L ++ DF R Sbjct: 320 PANKWRTALEDLADFVADR 338 >gi|163738897|ref|ZP_02146310.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107] gi|161387702|gb|EDQ12058.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107] Length = 332 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 144/316 (45%), Positives = 202/316 (63%), Gaps = 2/316 (0%) Query: 8 TLKD-MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 TL D M VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A + Y GDNHV Sbjct: 16 TLSDEMAAVNTLIQTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYSGDNHV 75 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F +++ET Sbjct: 76 KLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETG 135 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L+ L+ + T+AEGE+ Q++ + +L E YL V++ KTA LFSAA + ++A Sbjct: 136 SLRVLDILANASATIAEGEVLQMTAASDLATDEGIYLQVVRGKTAALFSAATQAGGVVAN 195 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + AL +YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI A + Sbjct: 196 APETQIDALFAYGDALGIAFQIADDLLDYQGDSAATGKNVGDDFRERKLTLPVIKAVAQA 255 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T E+ FW TI G+ +L A +M + L T + A + KA+++L LPD Sbjct: 256 TAEERGFWVRTIEKGRQDEGDLDHALALMDKYDTLTATRHDAMDWVAKAQNALTALPDDP 315 Query: 306 WKKSLMEVVDFCLQRL 321 ++ L ++ D+ + RL Sbjct: 316 IRQMLHDLADYVVARL 331 >gi|84500217|ref|ZP_00998483.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597] gi|84392151|gb|EAQ04419.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597] Length = 331 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 145/312 (46%), Positives = 199/312 (63%), Gaps = 1/312 (0%) Query: 11 DMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 D+ VN LI +R+ S IP+V +L+ +GGKR+RPMLTLA A + Y G H+ LA Sbjct: 19 DLGAVNALIRERMASRHAPRIPEVTAHLVEAGGKRIRPMLTLAAARLCGYDGPYHIHLAA 78 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L ++AF +++E + Sbjct: 79 TVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPGNLRV 138 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L LS A T+AEGE+ QLS +++L TEE YL VI+ KTA LFSAA E IAG + Sbjct: 139 LSILSDAAATIAEGEVLQLSAAQDLKTTEETYLQVIRGKTAALFSAATEAGGEIAGASPA 198 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AL YG LGIAFQ+ DD+LD+ G+ + GKN+G+DFR K TLP+I A E Sbjct: 199 QVRALFDYGDALGIAFQMADDLLDWTGKTDSTGKNVGDDFRERKLTLPLIRAVAAADDEE 258 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI G+ + E+L A ++ + AL T A + +AK +L LPD Sbjct: 259 RAFWTRTIEKGRQNDEDLATARELLDRHGALGSTRETALDWADRAKSALTHLPDHDLTAH 318 Query: 310 LMEVVDFCLQRL 321 L ++ D+ ++RL Sbjct: 319 LSDLADYVVERL 330 >gi|304570808|ref|YP_002517571.2| trans-isoprenyl diphosphate synthase [Caulobacter crescentus NA1000] Length = 336 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 149/314 (47%), Positives = 208/314 (66%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A + D+ Sbjct: 21 LAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGADNDHFQK 80 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF +++ET S Sbjct: 81 LAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVETNS 140 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E ++ AGV Sbjct: 141 MKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGV 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++LA R Sbjct: 201 DVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLLAIARSG 260 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 RE FW+ I + + + ++A ++ + AL T A Y KAK +L P + W Sbjct: 261 PREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPANDW 320 Query: 307 KKSLMEVVDFCLQR 320 +++L E+ DF + R Sbjct: 321 REALEELADFAVSR 334 >gi|254475222|ref|ZP_05088608.1| decaprenyl diphosphate synthase [Ruegeria sp. R11] gi|214029465|gb|EEB70300.1| decaprenyl diphosphate synthase [Ruegeria sp. R11] Length = 406 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 144/320 (45%), Positives = 205/320 (64%), Gaps = 1/320 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 ML ++M VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A + Y G Sbjct: 86 MLAATLSEEMAAVNTLIRTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYSG 145 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DNHV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F ++ Sbjct: 146 DNHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLM 205 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +ET S L+ L+ + T+AEGE+ Q++ + +L E+ YL V++ KTA LFSAA + Sbjct: 206 VETGSLRVLDILANASATIAEGEVLQMTAASDLATDEDIYLQVVRGKTAALFSAATQAGG 265 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IA + AL +YG LGIAFQ+ DD+LDY+G+ + GKN+G+DFR K TLPVI A Sbjct: 266 VIAEASEAEVDALYAYGDALGIAFQIADDLLDYQGDSSATGKNVGDDFRERKLTLPVIKA 325 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T E+ FW TI G+ +L A +M + L T A ++ KA+D+L L Sbjct: 326 VAQATAEERAFWVRTIEKGRQDEGDLDHALALMDKYDTLGATRRDAMAWVAKAQDALTAL 385 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 P+ ++ L ++ D+ + RL Sbjct: 386 PEDPIRQMLHDLADYVVARL 405 >gi|126733996|ref|ZP_01749743.1| Farnesyltranstransferase [Roseobacter sp. CCS2] gi|126716862|gb|EBA13726.1| Farnesyltranstransferase [Roseobacter sp. CCS2] Length = 332 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 143/309 (46%), Positives = 203/309 (65%), Gaps = 2/309 (0%) Query: 15 VNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLA A M Y G HV LA +EF Sbjct: 25 VNTLIRERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYDGPYHVHLAATVEF 84 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IHTATLLHDDVVD+S+ RRG+ A L+W N +SVLVGD+L +++F +++ET S L+ L Sbjct: 85 IHTATLLHDDVVDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDIL 144 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + A T+AEGE+ QL+ + +L TE+ YL V++ KTA LFSAA+EV IA + +QA Sbjct: 145 ANAAATIAEGEVLQLTAASDLATTEDIYLQVVRGKTAALFSAAMEVGGEIADQDAATKQA 204 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L YG LGI+FQ+VDD+LDY G GKN+G+DFR K TLPVI A E++FW Sbjct: 205 LFDYGDALGISFQIVDDLLDY-GGTKATGKNVGDDFRERKLTLPVIRAIAAADAGERDFW 263 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 TI G+ +L A ++ ++ + T A ++ +KAK +L +PD + K+ L+++ Sbjct: 264 VRTIGKGRQEAGDLDHAIALLAKHGTMEATRLDALAWAEKAKSALDAIPDHALKQMLVDL 323 Query: 314 VDFCLQRLN 322 D+ + R+ Sbjct: 324 ADYVVARIT 332 >gi|85708095|ref|ZP_01039161.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1] gi|85689629|gb|EAQ29632.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1] Length = 336 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 146/298 (48%), Positives = 203/298 (68%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT M VN +IL+R+ S++ +IP + +LI GGKRLRPMLTLA A ++ Y G H Sbjct: 21 LTANGMNSVNSVILERMQSEIPLIPRLAGHLISGGGKRLRPMLTLAGAALVGYEGTRHHK 80 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRGK AA +V+GN +VLVGDFL S+AF ++ E S Sbjct: 81 LAAAVEFIHTATLLHDDVVDGSELRRGKAAANIVFGNPATVLVGDFLFSRAFELMTEDGS 140 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ LS + +AEGE+ QL+ + ++ +EE YLH+I +KTA LF+AA ++S+++A Sbjct: 141 LRVLKILSHASAVIAEGEVSQLTAQRQIETSEERYLHIIGAKTAALFAAASQISAVVAEC 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +AL+ YG NLG+AFQLVDD +DY + +MGK+ G+DFR GK TLPVILA RG Sbjct: 201 SDEEERALEDYGRNLGVAFQLVDDAIDYDSDAAQMGKDQGDDFREGKMTLPVILAHARGD 260 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + E+ FWK I + S E+ +A ++ ++ AL DT +A + Q+A D++ DS Sbjct: 261 EAERKFWKDAILGHRSSDEDFAEAIRLIEKHNALEDTREKARHFAQRAIDAISIFADS 318 >gi|220964307|gb|ACL95663.1| trans-isoprenyl diphosphate synthase [Caulobacter crescentus NA1000] Length = 322 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 210/320 (65%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A + Sbjct: 1 MDRLVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGAD 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D+ LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF + Sbjct: 61 NDHFQKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFEL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E Sbjct: 121 MVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AGV + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++L Sbjct: 181 AVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLL 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A R RE FW+ I + + + ++A ++ + AL T A Y KAK +L Sbjct: 241 AIARSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAM 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P + W+++L E+ DF + R Sbjct: 301 FPANDWREALEELADFAVSR 320 >gi|16126352|ref|NP_420916.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15] gi|13423600|gb|AAK24084.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15] Length = 338 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 149/314 (47%), Positives = 208/314 (66%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A + D+ Sbjct: 23 LAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGADNDHFQK 82 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF +++ET S Sbjct: 83 LAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVETNS 142 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E ++ AGV Sbjct: 143 MKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGV 202 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++LA R Sbjct: 203 DVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLLAIARSG 262 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 RE FW+ I + + + ++A ++ + AL T A Y KAK +L P + W Sbjct: 263 PREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPANDW 322 Query: 307 KKSLMEVVDFCLQR 320 +++L E+ DF + R Sbjct: 323 REALEELADFAVSR 336 >gi|126728318|ref|ZP_01744134.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Sagittula stellata E-37] gi|126711283|gb|EBA10333.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Sagittula stellata E-37] Length = 325 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 147/313 (46%), Positives = 207/313 (66%), Gaps = 2/313 (0%) Query: 11 DMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +M VN LI +R+ S IP+V +L+ +GGKRLRPMLTLA+A + Y G HV LA Sbjct: 14 EMAAVNDLIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLTLASAKLCGYDGPYHVHLAA 73 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F ++ ET + Sbjct: 74 TVEFIHTATLLHDDVVDESERRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTETGNLRV 133 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L LS A T+AEGE+ QL+ +++L TE+ YL V++ KTA LFSAA EV +IAG Sbjct: 134 LRILSDAAATIAEGEVLQLTAAQDLSTTEDIYLQVVRGKTAALFSAATEVGGVIAGRPEE 193 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AL YG LGIAFQ+VDD+LDY G + GKN+G+DFR K TLP+I AF + E Sbjct: 194 DVRALFDYGDALGIAFQIVDDLLDYWGG-DATGKNVGDDFRERKLTLPLIKAFAKADDAE 252 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 K FWK I G +L++A ++ + AL +T A ++ ++AK +++ LP S + Sbjct: 253 KAFWKRVIEKGDQREGDLEEALRLLERHGALEETRQEALAWAERAKTAMQKLPSSGLRDL 312 Query: 310 LMEVVDFCLQRLN 322 L+E+ D+ + R+N Sbjct: 313 LIELSDYVVSRVN 325 >gi|308388198|pdb|3OYR|A Chain A, Crystal Structure Of Polyprenyl Synthase From Caulobacter Crescentus Cb15 Complexed With Calcium And Isoprenyl Diphosphate gi|308388199|pdb|3OYR|B Chain B, Crystal Structure Of Polyprenyl Synthase From Caulobacter Crescentus Cb15 Complexed With Calcium And Isoprenyl Diphosphate Length = 345 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 149/314 (47%), Positives = 208/314 (66%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A + D+ Sbjct: 30 LAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGADNDHFQK 89 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF +++ET S Sbjct: 90 LAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVETNS 149 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E ++ AGV Sbjct: 150 MKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGV 209 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++LA R Sbjct: 210 DVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLLAIARSG 269 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 RE FW+ I + + + ++A ++ + AL T A Y KAK +L P + W Sbjct: 270 PREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPANDW 329 Query: 307 KKSLMEVVDFCLQR 320 +++L E+ DF + R Sbjct: 330 REALEELADFAVSR 343 >gi|149913258|ref|ZP_01901792.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b] gi|149813664|gb|EDM73490.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b] Length = 333 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 147/312 (47%), Positives = 203/312 (65%), Gaps = 1/312 (0%) Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 M VN LI +R+ S IP+V +L+ +GGKRLRPMLTLATA M Y G V LA Sbjct: 22 MAAVNTLIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLTLATADMCGYGGAFDVHLAAT 81 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L ++AF +++E + L Sbjct: 82 VEFIHTATLLHDDVVDESQQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPGNLRVL 141 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS A +AEGE+ QLS +++L E YL V++ KTA LFSAA EV +IA + Sbjct: 142 DILSNAAAVIAEGEVLQLSAARDLKTDENIYLQVVRGKTAALFSAATEVGGVIADAPEAQ 201 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL YG LGIAFQ+VDD+LDY+G+ N GKN+G+DFR K TLPVI A + E+ Sbjct: 202 IKALFDYGDALGIAFQIVDDLLDYQGDSNATGKNVGDDFRERKLTLPVIKAVAAADETER 261 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FW TI G+ +L+ A +++++ AL T A S+ KAK ++ LPD + + L Sbjct: 262 AFWIRTIEKGRQEDGDLQHALDLLKKHGALEATRQDALSWAAKAKSAMDALPDHAVRGML 321 Query: 311 MEVVDFCLQRLN 322 ++ D+ + R+N Sbjct: 322 TDLADYVVARVN 333 >gi|329889422|ref|ZP_08267765.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC 11568] gi|328844723|gb|EGF94287.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC 11568] Length = 367 Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 143/316 (45%), Positives = 202/316 (63%), Gaps = 2/316 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNH 64 L DM V+ LI+ R+ SDV +IP + ++L+ +GGKRLRP+LT+A A + G D Sbjct: 50 LAKDDMAAVDALIIARMQSDVPVIPLLAEHLVSAGGKRLRPLLTVAAARAIGQTGAIDGP 109 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 LA ++EFIHTATLLHDD+VD S +RRGKVAA L+WG+ +SVLVGDFL ++AF +++ET Sbjct: 110 KKLAASVEFIHTATLLHDDIVDGSEMRRGKVAAHLIWGSASSVLVGDFLFARAFELMVET 169 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 S AL L+ + +AEGE+ QL+ + +L++ + YL +I++KTA LF+AA E ++ A Sbjct: 170 DSLRALGILARASAVIAEGEVLQLTRAHDLNLDLDTYLQIIRAKTAELFAAAAESGAVGA 229 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G + AL+ YGM LGIAFQL DD LDY G +GKN G+DF GK TLP++LA QR Sbjct: 230 GATDEQVAALRDYGMALGIAFQLADDALDYGGATETLGKNAGDDFNEGKATLPLLLAVQR 289 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 E FW I G E+ +A ++ + A+ T A Y +AK +L+ LP Sbjct: 290 TKGTEDLFWDRVITKGDRKPEDFDRARQLIVASGAVEATLDTASEYADRAKTALQVLPAG 349 Query: 305 SWKKSLMEVVDFCLQR 320 W+ +L + DF + R Sbjct: 350 PWRSALEALADFAVSR 365 >gi|89052978|ref|YP_508429.1| trans-hexaprenyltranstransferase [Jannaschia sp. CCS1] gi|88862527|gb|ABD53404.1| Trans-hexaprenyltranstransferase [Jannaschia sp. CCS1] Length = 335 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 145/315 (46%), Positives = 201/315 (63%), Gaps = 3/315 (0%) Query: 11 DMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 D+ VN LI R+ S IP+V +L+ +GGKR+RPMLTLA A + Y GD+HV LA Sbjct: 21 DLTAVNTLIRARMASKHAPRIPEVTAHLVEAGGKRIRPMLTLACARLCGYSGDDHVKLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S RRG+ A L+W NQ+SVLVGD+L ++AF +++E + Sbjct: 81 TVEFIHTATLLHDDVVDESEQRRGRPTANLLWDNQSSVLVGDYLFARAFQLMVEPGNLRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ LS A T+AEGE+ QL+++ N++ EE YL VI+ KTA LF AA EV +IAG Sbjct: 141 LDILSNAAATIAEGEVLQLTVASNIETPEETYLQVIRGKTAALFEAACEVGGVIAGRDTF 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRG--EVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + QAL +YG LG+AFQ+ DD+LD+ G ++ KNIG+DFR K TLPVI A Sbjct: 201 IIQALATYGDGLGVAFQMADDLLDWGGVDGGAQLDKNIGDDFRERKMTLPVIRAIAAANG 260 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 E+ FW TI G +L++A +++ + L T A + +AK +L LPD + Sbjct: 261 DERAFWARTIGKGDQRDGDLEQALDVLQRHGTLASTRDAANDHVARAKAALTNLPDDPLR 320 Query: 308 KSLMEVVDFCLQRLN 322 L ++ D+ + RLN Sbjct: 321 DMLADLADYVVARLN 335 >gi|294678700|ref|YP_003579315.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003] gi|77862362|gb|ABB04465.1| decaprenyl diphosphate synthase [Rhodobacter capsulatus] gi|294477520|gb|ADE86908.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003] Length = 333 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 144/313 (46%), Positives = 202/313 (64%), Gaps = 1/313 (0%) Query: 10 KDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +DM VN LI +R+ S+ IP+V +LI +GGKRLRPMLTLA A ++ Y G HV LA Sbjct: 20 EDMAAVNALIRERMSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYGGPFHVHLA 79 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F ++ +T + Sbjct: 80 ATVEFIHTATLLHDDVVDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTDTGNMR 139 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +E L+ + +AEGE+ QL+ ++NL TE+ YL VI+ KTA LFSAA EV +I G Sbjct: 140 VMEILANASAVIAEGEVLQLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGIIGGAPE 199 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 QAL YG LGIAFQ+VDD+LDY G+ E+GKN G+DFR K T+PVI A + Sbjct: 200 DQVQALFDYGDALGIAFQIVDDLLDYGGKSAEIGKNTGDDFRERKLTMPVIKAVALADEA 259 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E+ FWK I G +L+ A +M ++ L T A + A+ +L LPD ++ Sbjct: 260 ERAFWKRVIEKGDQQDGDLEHAMALMTKHGTLEATRLAAIGWTDTARKALAKLPDHPLRQ 319 Query: 309 SLMEVVDFCLQRL 321 L ++ D+ ++R+ Sbjct: 320 MLDDLADYVVERV 332 >gi|297787795|pdb|3MZV|A Chain A, Crystal Structure Of A Decaprenyl Diphosphate Synthase From Rhodobacter Capsulatus gi|297787796|pdb|3MZV|B Chain B, Crystal Structure Of A Decaprenyl Diphosphate Synthase From Rhodobacter Capsulatus Length = 341 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 144/313 (46%), Positives = 202/313 (64%), Gaps = 1/313 (0%) Query: 10 KDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +DM VN LI +R+ S+ IP+V +LI +GGKRLRPMLTLA A ++ Y G HV LA Sbjct: 20 EDMAAVNALIRERMSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYGGPFHVHLA 79 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F ++ +T + Sbjct: 80 ATVEFIHTATLLHDDVVDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTDTGNMR 139 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +E L+ + +AEGE+ QL+ ++NL TE+ YL VI+ KTA LFSAA EV +I G Sbjct: 140 VMEILANASAVIAEGEVLQLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGIIGGAPE 199 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 QAL YG LGIAFQ+VDD+LDY G+ E+GKN G+DFR K T+PVI A + Sbjct: 200 DQVQALFDYGDALGIAFQIVDDLLDYGGKSAEIGKNTGDDFRERKLTMPVIKAVALADEA 259 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E+ FWK I G +L+ A +M ++ L T A + A+ +L LPD ++ Sbjct: 260 ERAFWKRVIEKGDQQDGDLEHAMALMTKHGTLEATRLAAIGWTDTARKALAKLPDHPLRQ 319 Query: 309 SLMEVVDFCLQRL 321 L ++ D+ ++R+ Sbjct: 320 MLDDLADYVVERV 332 >gi|163732321|ref|ZP_02139767.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149] gi|161394619|gb|EDQ18942.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149] Length = 333 Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 149/313 (47%), Positives = 208/313 (66%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM VN LI +R+ S IP+V +L+ +GGKRLRPMLTLATA + Y G H+ LA Sbjct: 21 DMAAVNTLIRERMASKHAPRIPEVTAHLVDAGGKRLRPMLTLATAHLCGYDGPFHINLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +++ET S Sbjct: 81 TVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ + T+AEGE+ QL+ S+NL TEE YL V++ KTA LFSAA EV +IAG + Sbjct: 141 LDILANASATIAEGEVLQLTASQNLATTEEIYLQVVRGKTAALFSAATEVGGVIAGAPDD 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL YG LG+AFQ+VDD+LD++G+ +GKNIG+DFR K T+P+I A + E Sbjct: 201 QVAALFEYGDALGVAFQIVDDLLDFQGDAGAIGKNIGDDFRERKLTMPLIKAVAKADAEE 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI GK +L+ A ++ ++ AL DT A + +AK +L LP K Sbjct: 261 RAFWVRTIEKGKQEESDLQHAIDLLHKHAALFDTSVVARAEAARAKAALAPLPAHPVKDM 320 Query: 310 LMEVVDFCLQRLN 322 L+++ D+ ++R+N Sbjct: 321 LVDLADYVVERIN 333 >gi|255264686|ref|ZP_05344028.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62] gi|255107021|gb|EET49695.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62] Length = 332 Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 138/312 (44%), Positives = 207/312 (66%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 D+E VN +I R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y GDNH+ LA Sbjct: 21 DLEAVNEVIAARMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAAQLCGYDGDNHIKLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+SA RRG+ A L+W NQ+SVLVGD+L +++F ++++T S Sbjct: 81 TVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNQSSVLVGDYLFARSFQLMVKTGSLRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ A T+AEGE+ Q++ +++L TE+ YL +++ KTA LFSAA +V +I+ + Sbjct: 141 LDILANAAATIAEGEVLQMTAAQDLGTTEDTYLKIVRGKTAALFSAATQVGGVISDADET 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + +AL YG LGIAFQ+VDD+LDY G + GKNIG+DFR K TLPVI A E Sbjct: 201 IVKALYDYGDALGIAFQIVDDLLDYGGS-DATGKNIGDDFRERKLTLPVIKAVAAADTEE 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW+ I GK +L+ A ++ ++ ++ A + + AK ++ LP + ++ Sbjct: 260 RAFWERVIEKGKQDEGDLEHALTLLAKHGSMQAARVDALEWIEVAKSAMANLPQAPLREM 319 Query: 310 LMEVVDFCLQRL 321 L+++ D+ + R+ Sbjct: 320 LIDLADYVVARV 331 >gi|110680572|ref|YP_683579.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114] gi|109456688|gb|ABG32893.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114] Length = 333 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 148/313 (47%), Positives = 207/313 (66%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM V+ LI +R+ S IP+V +L+ +GGKRLRPMLTLA A + Y G H+ LA Sbjct: 21 DMAAVSTLIRERMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYDGPFHINLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +++ET S Sbjct: 81 TVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ + T+AEGE+ QL+ S+NL TEE YL V++ KTA LFSAA EV +IAG + Sbjct: 141 LDILANASATIAEGEVLQLTASQNLATTEEVYLQVVRGKTAALFSAATEVGGVIAGAPDD 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL YG LGIAFQ+VDD+LD++G+ +GKNIG+DFR K T+P+I A + E Sbjct: 201 HVAALFEYGDALGIAFQIVDDLLDFQGDAGAIGKNIGDDFRERKLTMPLIKAVAKADAEE 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI GK +L+ A ++ ++ AL DT A + +AK +L LP K Sbjct: 261 RAFWVRTIEKGKQEEGDLQHAIALLHKHAALTDTSVVARTQAARAKAALAPLPAHPVKDM 320 Query: 310 LMEVVDFCLQRLN 322 L+++ D+ ++R+N Sbjct: 321 LVDLADYVVERIN 333 >gi|84515724|ref|ZP_01003085.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53] gi|84510166|gb|EAQ06622.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53] Length = 332 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 142/309 (45%), Positives = 200/309 (64%), Gaps = 2/309 (0%) Query: 15 VNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 VN +I R+ S+ IP V +L+ +GGKRLRPMLTLA A M Y G H+ LA +EF Sbjct: 25 VNAMIRDRMASEHAPRIPQVTAHLVEAGGKRLRPMLTLAAARMCGYDGPYHIHLAATVEF 84 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IHTATLLHDDVVD+S+ RRG+ A L+W N +SVLVGD+L +++F +++ET S L+ L Sbjct: 85 IHTATLLHDDVVDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDIL 144 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + + T+AEGE+ QL+ + +L TE+ Y+ V++ KTA LFSAA+EV IAG +++QA Sbjct: 145 ANASATIAEGEVLQLTAAADLATTEDIYIKVVRGKTAALFSAAMEVGGEIAGQDPAIKQA 204 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L YG LGI+FQ+VDD+LDY G GKN+G+DFR K TLPVI A E+ FW Sbjct: 205 LFDYGDALGISFQIVDDLLDY-GGTKATGKNVGDDFRERKLTLPVIRAVAAADADERAFW 263 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + TI G+ +L A ++ + L T A + KAK++L +PD + K L+++ Sbjct: 264 ERTIQKGRQQDGDLDHAIALLHRHGTLESTRQDAILWAAKAKEALGVIPDHALKTMLVDL 323 Query: 314 VDFCLQRLN 322 D+ + RL Sbjct: 324 ADYVVARLT 332 >gi|85705714|ref|ZP_01036811.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. 217] gi|85669704|gb|EAQ24568.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. 217] Length = 333 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 147/312 (47%), Positives = 202/312 (64%), Gaps = 1/312 (0%) Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ME VN LI +R+ S IP V +L+ +GGKRLRPML LATA + Y G V LA Sbjct: 22 MEAVNVLIRERMASRHAPRIPQVTAHLVEAGGKRLRPMLVLATADLCGYDGPFDVHLAAT 81 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L ++AF +++E S L Sbjct: 82 VEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPGSLRVL 141 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS + T+AEGE+ QLS +++L TE+ YL V++ KTA LFSAA EV +IAG Sbjct: 142 DILSNASATIAEGEVLQLSAAQDLATTEDIYLQVVRGKTAALFSAATEVGGVIAGAPEDH 201 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL YG LGIAFQ+VDD+LDY+G+V GKN+G+DFR K TLPVI A + E+ Sbjct: 202 VKALFEYGDALGIAFQIVDDLLDYQGDVKSTGKNVGDDFRERKLTLPVIKAVAAASAEER 261 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FWK TI G +L+ A +M+ + AL T A + +A+ ++ LPD ++ L Sbjct: 262 AFWKRTIEKGDQRDGDLEHALTLMQAHGALEQTRAEALDWAARARAAIAVLPDHPVQRML 321 Query: 311 MEVVDFCLQRLN 322 + + + R++ Sbjct: 322 DNLAGYVVARIS 333 >gi|126666697|ref|ZP_01737674.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] gi|126628742|gb|EAZ99362.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] Length = 322 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 143/317 (45%), Positives = 198/317 (62%), Gaps = 2/317 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D D +VN LI++R+ SDV M+ + +Y+I SGGKRLRP+L L + Y DNH+ Sbjct: 8 DTVADDFSRVNELIIQRLSSDVPMVEKIAQYIIESGGKRLRPLLVLLASRATGYNEDNHL 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL ++AF M++E + Sbjct: 68 KLAAVIEFLHTATLLHDDVVDTSDMRRGRSTANAKWGNAPSVLVGDFLYARAFEMMVELE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S ++ LS +AEGE+ QL KN D+TE Y+ VI +KTA+LF A+ +L+AG Sbjct: 128 SLPIMKVLSHATAVIAEGEVMQLMNVKNPDLTENQYMQVIHNKTAMLFEASSHSGALLAG 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 ++ +ALK+YG +LG+AFQLVDDVLDYRG+ MGKN+G+D GK TLP+I A Sbjct: 188 ANHAQEEALKNYGKHLGLAFQLVDDVLDYRGDAETMGKNVGDDLAEGKTTLPLIYAIANS 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 EK + I G +++L+ I+ AL +A + Q+AKD L+ LP S Sbjct: 248 NDDEKKLIRRAIRKG--GLDDLQPVLAIINTTGALNYAMDKAKNQAQQAKDCLQSLPASE 305 Query: 306 WKKSLMEVVDFCLQRLN 322 +L + D + R++ Sbjct: 306 HLDALHLLTDIAVARIS 322 >gi|254439584|ref|ZP_05053078.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] gi|198255030|gb|EDY79344.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] Length = 332 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 145/312 (46%), Positives = 203/312 (65%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +M+ VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A M Y G HV LA Sbjct: 21 EMDAVNVLITDRMASKHAPRIPEVTAHLVGAGGKRLRPMLTLAAAKMCGYSGPYHVHLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+SA RRG+ A L+W N +SVLVGD+L +++F +++ET S Sbjct: 81 TVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ + T+AEGE+ QL+ + +L TE YL +++ KTA LFSAA+EV +IAG + Sbjct: 141 LDILANASATIAEGEVLQLTAASDLATTEAIYLQIVRGKTAALFSAAMEVGGVIAGQDAA 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + +AL YG LGI FQ+VDD+LDY G + +GKNIG+DFR K TLPVI A E Sbjct: 201 LVEALYDYGDALGIGFQIVDDLLDYAG-TDAIGKNIGDDFRERKLTLPVIKAVALADVEE 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI G+ +L A ++ ++ L T+ A ++ +KAK +L LPD K Sbjct: 260 RAFWVRTIEKGRQEDGDLDAALGLLVKHGTLDATKSEALAWMEKAKAALAPLPDHPIKPM 319 Query: 310 LMEVVDFCLQRL 321 L+++ + + R+ Sbjct: 320 LLDLAGYVVARV 331 >gi|291465068|gb|ADE06004.1| polyprenyl synthase [Rhodobacter sphaeroides 2.4.1] Length = 333 Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 140/313 (44%), Positives = 206/313 (65%), Gaps = 1/313 (0%) Query: 10 KDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y G H+ LA Sbjct: 20 EDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLA 79 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +++ET S Sbjct: 80 ATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLR 139 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA EV ++AGV Sbjct: 140 VMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPE 199 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + +AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI A + Sbjct: 200 AQVEALHAYGDALGIAFQIVDDLLDYGGVDAQIGKNTGDDFRERKLTLPVIKAVAQADAE 259 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E+ FW+ I G +L++A IM + A+ A + A+++L LP+ +K Sbjct: 260 ERAFWQRVIEKGDQREGDLEQAHAIMSRHGAMEAARQDALRWVTVAREALGQLPEHPLRK 319 Query: 309 SLMEVVDFCLQRL 321 L ++ DF ++R+ Sbjct: 320 MLHDLADFVVERI 332 >gi|302383413|ref|YP_003819236.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302194041|gb|ADL01613.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 346 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 142/315 (45%), Positives = 201/315 (63%), Gaps = 5/315 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVL--- 66 DM V+ LIL R+ S V +IP + ++++ +GGKRLRP+LT+A A R D + Sbjct: 30 DMAAVDALILDRMQSSVPVIPLLAEHIVSAGGKRLRPLLTIAAARSATADRPDADLTAAL 89 Query: 67 -LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA ++EFIHTATLLHDDVVD S RRGKVAA L+WG+ TSVLVGDFL ++AF +++ET Sbjct: 90 KLAASVEFIHTATLLHDDVVDGSERRRGKVAAHLIWGSATSVLVGDFLFARAFELMVETD 149 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 AL L+ + +A+GE+ QL+ + +L++ +E YL +I +KTA LF+AA E ++ G Sbjct: 150 QIRALGILAQASSVIAQGEVLQLTRAHDLNLDQETYLRIISAKTAELFAAAAESGAVGVG 209 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL+SYG+NLG+AFQL DD LDY G +GKN G+DFR GK T+P++LA R Sbjct: 210 ADPKTTSALRSYGLNLGLAFQLADDALDYGGSSEALGKNAGDDFREGKVTMPLLLAVART 269 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 RE FW TIN + + ++ ++A ++ A+ T A Y AK +L LP+ Sbjct: 270 RGREDAFWDRTINGNQRTDDDFRRARELIVGTGAVSATLDAAGEYADAAKTALGVLPNGE 329 Query: 306 WKKSLMEVVDFCLQR 320 WK +L + DF + R Sbjct: 330 WKAALERLADFAVSR 344 >gi|146278504|ref|YP_001168663.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145556745|gb|ABP71358.1| Polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 333 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 140/312 (44%), Positives = 202/312 (64%), Gaps = 1/312 (0%) Query: 11 DMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y G H+ LA Sbjct: 21 DMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +++ET S Sbjct: 81 TVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA EV ++AGV + Sbjct: 141 MDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPEA 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI A + E Sbjct: 201 QVAALHAYGDALGIAFQIVDDLLDYGGADAQIGKNTGDDFRERKLTLPVIKAVAKADAEE 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW+ I G +L +A IM + A+ A + A++SL LP+ + Sbjct: 261 RAFWQRVIEKGDQREGDLAQAHAIMARHGAMEAARQDALHWVAVARESLTQLPEHPLRDM 320 Query: 310 LMEVVDFCLQRL 321 L ++ DF ++R+ Sbjct: 321 LHDLADFVVERI 332 >gi|77464324|ref|YP_353828.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase [Rhodobacter sphaeroides 2.4.1] gi|57115620|gb|AAW33555.1| decaprenyl diphosphate synthase [Rhodobacter sphaeroides] gi|77388742|gb|ABA79927.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Rhodobacter sphaeroides 2.4.1] Length = 333 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 139/313 (44%), Positives = 206/313 (65%), Gaps = 1/313 (0%) Query: 10 KDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y G H+ LA Sbjct: 20 EDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLA 79 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +++ET S Sbjct: 80 ATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLR 139 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA EV ++AGV Sbjct: 140 VMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPE 199 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + +AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI A + Sbjct: 200 AQVEALHAYGDALGIAFQIVDDLLDYGGVDAQIGKNTGDDFRERKLTLPVIKAVAQADAE 259 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E+ FW+ I G +L++A IM + A+ A + A+++L LP+ ++ Sbjct: 260 ERAFWQRVIEKGDQREGDLEQAHAIMSRHGAMEAARQDALRWVTVAREALGQLPEHPLRE 319 Query: 309 SLMEVVDFCLQRL 321 L ++ DF ++R+ Sbjct: 320 MLHDLADFVVERI 332 >gi|126463166|ref|YP_001044280.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC 17029] gi|332559215|ref|ZP_08413537.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N] gi|126104830|gb|ABN77508.1| Trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC 17029] gi|332276927|gb|EGJ22242.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N] Length = 333 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 139/313 (44%), Positives = 206/313 (65%), Gaps = 1/313 (0%) Query: 10 KDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y G H+ LA Sbjct: 20 EDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLA 79 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +++ET S Sbjct: 80 ATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLR 139 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA EV ++AGV Sbjct: 140 VMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPE 199 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + +AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI A + Sbjct: 200 AQVEALHAYGDALGIAFQIVDDLLDYGGVDAQIGKNTGDDFRERKLTLPVIKAVAQADAE 259 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E+ FW+ I G +L++A IM + A+ A + A+++L LP+ ++ Sbjct: 260 ERAFWQRVIEKGDQREGDLEQAHAIMSRHGAMEAARQDALRWVAVAREALGQLPEHPLRE 319 Query: 309 SLMEVVDFCLQRL 321 L ++ DF ++R+ Sbjct: 320 MLHDLADFVVERI 332 >gi|83952381|ref|ZP_00961112.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM] gi|83836054|gb|EAP75352.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM] Length = 333 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 142/312 (45%), Positives = 205/312 (65%), Gaps = 1/312 (0%) Query: 12 MEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ME VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y GD+ LA Sbjct: 22 MEAVNALIRARMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAAICGYEGDHDERLAAT 81 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +++ET S L Sbjct: 82 VEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRVL 141 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ + T+AEGE+ QL+ S+++ TE YL V++ KTA LFSAA EV +IAG + V Sbjct: 142 DILANASATIAEGEVLQLTASRDIATTEATYLQVVRGKTAALFSAATEVGGVIAGASDEV 201 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL YG LGIAFQ+ DD+LD++G+ + GKN+G+DFR K TLP+I A + + E+ Sbjct: 202 TGALYDYGDALGIAFQIADDLLDFQGDSAKTGKNVGDDFRERKLTLPLIKAIAKADETER 261 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FW+ TI G +L A ++ ++RAL +T A + +A+ +L LP + L Sbjct: 262 AFWRRTIEKGAQGEGDLDHAIALLHKHRALEETLADAQGWAARAQAALAKLPAHPVRDML 321 Query: 311 MEVVDFCLQRLN 322 ++ D+ + R++ Sbjct: 322 GDLSDYVVARVS 333 >gi|114798232|ref|YP_759407.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444] gi|114738406|gb|ABI76531.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444] Length = 337 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 137/317 (43%), Positives = 202/317 (63%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L D+ V L+ R S V +IPD+ Y++ +GGKRLRPM+TL A + Sbjct: 20 MQALVADDLAAVERLLATRAASPVAVIPDLSGYIVSAGGKRLRPMITLIAAHAVGKANAA 79 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 LA A+EFIHTATLLHDDVVD+S LRRGK AA+ +WGN+ ++LVGDFL ++AF +++E Sbjct: 80 THALAAAVEFIHTATLLHDDVVDESDLRRGKPAAKAIWGNKAAILVGDFLFARAFNLLVE 139 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S + L L+ + +AEGE+RQL+ D+ E+YL ++++KT LF AA E ++ Sbjct: 140 ANSLDILNRLATASTVIAEGEVRQLAAMATRDLPTEEYLAIVEAKTGALFEAAAETGAMS 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + AL +YG NLG+AFQ++DD LDY G + +GK++G+DFR GK TLPVI+A + Sbjct: 200 AGGEE-YSDALATYGKNLGLAFQIIDDALDYGGTTSVIGKSVGDDFREGKITLPVIIARR 258 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG+ ++ FW +N +L A ++R A T A +Y AK +LR LP Sbjct: 259 RGSDEDRAFWDRALNPETQEDSDLAHAVHLIRATGAAEATVQEAEAYAALAKGALRTLPA 318 Query: 304 SSWKKSLMEVVDFCLQR 320 S+++ +L ++ DFC+ R Sbjct: 319 STYRDALEDLADFCVSR 335 >gi|149202965|ref|ZP_01879936.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. TM1035] gi|149143511|gb|EDM31547.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. TM1035] Length = 333 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 146/312 (46%), Positives = 200/312 (64%), Gaps = 1/312 (0%) Query: 12 MEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ME VN LI +R+ S IP V +L+ +GGKRLRPML LATA + Y G V LA Sbjct: 22 MEAVNLLIRERMASRHAPRIPQVTAHLVEAGGKRLRPMLVLATADLCGYDGPFDVHLAAT 81 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L ++AF +++E S L Sbjct: 82 VEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPGSLRVL 141 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS + T+AEGE+ QLS +++L TE+ YL V++ KTA LFSAA EV +IAG + Sbjct: 142 DILSNASATIAEGEVLQLSAAQDLATTEDIYLQVVRGKTAALFSAATEVGGVIAGAPETQ 201 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL YG LGIAFQ+VDD+LDY+G+ GKN+G+DFR K TLPVI A E+ Sbjct: 202 IKALFEYGDALGIAFQIVDDLLDYQGDAKSTGKNVGDDFRERKLTLPVIKAVSAANAEER 261 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FWK TI G +L+ A +M+ + AL T A + +A+ ++ LPD + L Sbjct: 262 AFWKRTIEKGDQRDGDLEHALALMQAHGALEQTRAEALDWAARARAAIAVLPDHPVRGML 321 Query: 311 MEVVDFCLQRLN 322 + + + R++ Sbjct: 322 DRLAGYVVARIS 333 >gi|120553786|ref|YP_958137.1| farnesyltranstransferase [Marinobacter aquaeolei VT8] gi|120323635|gb|ABM17950.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Marinobacter aquaeolei VT8] Length = 322 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 140/317 (44%), Positives = 201/317 (63%), Gaps = 2/317 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D D +VN LI+KR+ SDV ++ + +Y+I SGGKRLRP+L L + Y+ D+H+ Sbjct: 8 DTVADDFSRVNDLIIKRLASDVPLVEKIAQYIIESGGKRLRPLLVLLASQAAGYQKDDHL 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL ++AF M++E + Sbjct: 68 KLAAVIEFLHTATLLHDDVVDTSDMRRGRSTANAKWGNAPSVLVGDFLYARAFEMMVELQ 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S + LS +AEGE+ QL KN D++E+ Y+ VI +KTA+LF AA +L+A Sbjct: 128 SLPIMNVLSHATAVIAEGEVMQLMNVKNPDLSEDQYMVVIHNKTAMLFEAASHTGALLAK 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 ALK YG +LG+AFQLVDDVLDY+G+ MGKN+G+D GK TLP+I A +G Sbjct: 188 ASKEQETALKDYGKHLGLAFQLVDDVLDYQGDAETMGKNVGDDLAEGKTTLPLIYAMAKG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 ++ E+ + I G +++L K I++ + A+ T +A Q A+D L CLP S Sbjct: 248 SEDERQLIRQAIRKG--GLDDLPKVLDIVKASGAIEYTMTKAKEQAQIARDLLACLPGSE 305 Query: 306 WKKSLMEVVDFCLQRLN 322 +++L + + + R++ Sbjct: 306 HRQALELLTEVAVARVS 322 >gi|84683979|ref|ZP_01011881.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84667732|gb|EAQ14200.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Rhodobacterales bacterium HTCC2654] Length = 331 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 143/313 (45%), Positives = 204/313 (65%), Gaps = 2/313 (0%) Query: 11 DMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 D+ +V+ +I R+ S+ IP+V +L+ +GGKRLRPMLTLA+A + Y G +H+ LA Sbjct: 20 DLSQVDEMIRARMASEHAPRIPEVTAHLVDAGGKRLRPMLTLASARLCGYEGGHHIHLAT 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F ++ E S Sbjct: 80 AVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTEADSLRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ LS + T+ EGE+ QL+ +++L TE+ Y V++ KTA LF+AA EV ++AGV Sbjct: 140 LQVLSNASATITEGEVLQLTAAQDLGTTEDTYFKVVRGKTAALFAAATEVGGILAGVSED 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AL YG LGIAFQ+VDD+LD+ G + GKNIG+DFR K TLP+I A RG E Sbjct: 200 RIKALHDYGDALGIAFQVVDDLLDFWGG-DATGKNIGDDFRERKLTLPIIKAIARGDDEE 258 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FWK T+ +L++A IM + AL DT A + +AK L LP+ + Sbjct: 259 RAFWKRTLEKNDQRDGDLERALEIMTAHGALDDTRAAALDWAARAKACLDALPEDPIRDM 318 Query: 310 LMEVVDFCLQRLN 322 L ++ D+ + RLN Sbjct: 319 LSDIADYVVARLN 331 >gi|192361220|ref|YP_001981260.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107] gi|190687385|gb|ACE85063.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107] Length = 320 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 141/310 (45%), Positives = 196/310 (63%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D VN LI+ ++ SDV ++ ++ YL+ +GGKRLRP+L + A L Y G H+ LA Sbjct: 11 DFAAVNQLIIDQLHSDVGLVENIGHYLVEAGGKRLRPLLVMLAAKSLGYTGKQHLDLAAI 70 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTATLLHDDVVD S LRRG+ A WGN SVLVGDFL S+AF M++ S + + Sbjct: 71 IEFIHTATLLHDDVVDMSQLRRGRPTANAQWGNAPSVLVGDFLYSRAFQMMVAIGSMDVM 130 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS T+AEGE++QL +K+ +VTEE+Y VI KTA+LFSAA EV +IAG Sbjct: 131 AILSDTTNTIAEGEVQQLVNAKDPNVTEENYFQVIDKKTAILFSAACEVGGVIAGANTRQ 190 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+AL+ YG ++GIAFQLVDD LDY G+ +GKN+G+D GKPTLP+I A + GT+ + Sbjct: 191 REALRHYGSHVGIAFQLVDDALDYTGDAATLGKNVGDDLAEGKPTLPLIHAMRTGTRAQA 250 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 +TI G S L +++ + T A +A L+ LPD+++ +++ Sbjct: 251 ELVANTIRTGDAS--QLHAILEVVKATGGMDYTLQAARRQVDQALSQLQTLPDNAYSQAM 308 Query: 311 MEVVDFCLQR 320 ++ +F L R Sbjct: 309 RQLAEFSLAR 318 >gi|88798952|ref|ZP_01114534.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297] gi|88778432|gb|EAR09625.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297] Length = 322 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 141/310 (45%), Positives = 193/310 (62%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D E VN I + + SDV M+ V +Y+I SGGKR+RP+L L + D H LLA Sbjct: 13 DFEAVNSTIHRYLASDVPMVEKVAEYIIDSGGKRMRPLLVLLAGQLNGQLTDRHHLLAAI 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL +++F M++E + + + Sbjct: 73 IEFLHTATLLHDDVVDKSDMRRGRATANANWGNAPSVLVGDFLYARSFEMLVELGNFDVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++LS +AEGE+ QL KN D+TE Y+ VIK KTA+LF A+ E S LI+G + Sbjct: 133 QSLSQATRVIAEGEVMQLMNVKNPDITEAQYMEVIKGKTAILFKASAETSGLISGYDRTS 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL YG+NLG+AFQL+DD LDY G+ +GKNIG+D GKPTLP+I A ++GT EK Sbjct: 193 VNALADYGLNLGLAFQLIDDALDYAGDAEALGKNIGDDLAEGKPTLPLIFAMEKGTDEEK 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 ++ I G + VE L ++R A+ +A ++ AK +L DS K++L Sbjct: 253 ALVRNCIRKGGL-VE-LDAVLEVIRHTDAIGYVTQKALTHADAAKQALASFADSDSKRAL 310 Query: 311 MEVVDFCLQR 320 M + D + R Sbjct: 311 MALADLAVSR 320 >gi|254449834|ref|ZP_05063271.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus 238] gi|198264240|gb|EDY88510.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus 238] Length = 332 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 143/313 (45%), Positives = 205/313 (65%), Gaps = 2/313 (0%) Query: 11 DMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +M+ VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A M Y G HV LA Sbjct: 21 EMDAVNVLIRDRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAKMCGYGGPYHVHLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+SA RRG+ A L+W N +SVLVGD+L +++F +++ET S Sbjct: 81 TVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ + T+AEGE+ QL+ + +L +E YL +++ KTA LFSAALEV +IA + Sbjct: 141 LDILANASATIAEGEVLQLTAASDLATSEAVYLQIVRGKTAALFSAALEVGGVIAQQDEA 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + +AL YG LGI FQ+VDD+LDY G + +GK++G+DFR K TLPVI A E Sbjct: 201 LVKALYDYGDALGIGFQIVDDLLDYSG-TDAIGKDVGDDFRERKLTLPVIKAVALADATE 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI G+ +L+ A ++ ++ L T+ A ++ +KAK +L LPD K Sbjct: 260 RAFWVRTIEKGRQEDGDLQTALGLLVKHGTLDATKSDALAWMEKAKAALAPLPDHPIKLM 319 Query: 310 LMEVVDFCLQRLN 322 L+++ D+ + R+ Sbjct: 320 LLDLADYVVARIK 332 >gi|221640208|ref|YP_002526470.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131] gi|221160989|gb|ACM01969.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131] Length = 331 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 137/313 (43%), Positives = 205/313 (65%), Gaps = 1/313 (0%) Query: 10 KDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y G H+ LA Sbjct: 18 EDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLA 77 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +++ET S Sbjct: 78 ATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLR 137 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA +V ++AG+ Sbjct: 138 VMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATQVGGVVAGMPE 197 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + +AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI A + Sbjct: 198 AQVEALHAYGDALGIAFQIVDDLLDYGGVDAQIGKNTGDDFRERKLTLPVIKAVAQADAE 257 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E+ FW+ I G +L++A IM + A+ A + A+++L LP ++ Sbjct: 258 ERAFWQRVIEKGDQREGDLEQAHAIMSRHGAMEAARQDALRWVAVAREALGQLPKHPLRE 317 Query: 309 SLMEVVDFCLQRL 321 L ++ DF ++R+ Sbjct: 318 MLHDLADFVVERI 330 >gi|315498623|ref|YP_004087427.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48] gi|315416635|gb|ADU13276.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48] Length = 343 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 144/314 (45%), Positives = 209/314 (66%), Gaps = 1/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN +I +R+ SDV +IP + ++L+ +GGKRLRP+L +A A + +H Sbjct: 29 LCADDMAAVNAIITERMQSDVAVIPALAEHLVSAGGKRLRPLLCVAAARVAGTTNLHHRK 88 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 L+ A+EFIHTATLLHDDVVD S LRRGKVAA L+WG +SVLVGDFL ++AF +++ET S Sbjct: 89 LSAAVEFIHTATLLHDDVVDSSQLRRGKVAAHLIWGAPSSVLVGDFLFARAFELMVETDS 148 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +AL LS + +AEGE+ QL + ++++TE Y+ +I +KTAVLF+AA E ++ AG Sbjct: 149 LQALGILSKASGVIAEGEVLQLMKAYDVNLTEATYIDIIAAKTAVLFAAAAESGAVAAGA 208 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ +QAL+ YG+NLG+AFQ+ DD LDY G +GKN G+DF GK TLP+ILA + T Sbjct: 209 SSAGQQALRDYGLNLGLAFQIQDDALDYGGTTQSLGKNAGDDFAEGKATLPLILAV-KAT 267 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 FW T++ + +L +A ++ E+ A+ T A Y QKAKD+L+ S W Sbjct: 268 PEAAAFWHRTVSLRDQTDGDLAQAQALIVESGAMAKTMETARHYAQKAKDALKGFEPSDW 327 Query: 307 KKSLMEVVDFCLQR 320 + +L + D+ ++R Sbjct: 328 RTALEALADYSVER 341 >gi|89070187|ref|ZP_01157515.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516] gi|89044203|gb|EAR50354.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516] Length = 332 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 148/313 (47%), Positives = 206/313 (65%), Gaps = 2/313 (0%) Query: 11 DMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 D+ VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y G HV LA Sbjct: 21 DLAAVNALIRERMQSEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYDGPYHVHLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+SA RRG+ A L+W NQ+SVLVGD+L +++F ++++T + + Sbjct: 81 TVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNQSSVLVGDYLFAKSFLLMVDTGNLDV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L LS + T+AEGE+ QL+ S++L E Y+ VI+ KTA LFSAA EV +IAG Sbjct: 141 LRILSQASATIAEGEVLQLTASRSLATDEAVYMKVIRGKTAALFSAATEVGGVIAGQGPE 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V +AL YG LGIAFQ+VDD+LDY G GKN+G+DFR K TLPVI A R E Sbjct: 201 VCRALFDYGDALGIAFQIVDDLLDYEG-TEATGKNVGDDFRERKLTLPVIKAVARADAEE 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW+ TI G+ +L+ A ++ + AL +T A + +AK +L LPDS+ + Sbjct: 260 RAFWQRTIEKGRQEEGDLETALGLLARHGALDETRAAAIEWAARAKAALAPLPDSALTEM 319 Query: 310 LMEVVDFCLQRLN 322 L ++ D+ + R++ Sbjct: 320 LADLADYVVARIS 332 >gi|114327555|ref|YP_744712.1| decaprenyl diphosphate synthase [Granulibacter bethesdensis CGDNIH1] gi|114315729|gb|ABI61789.1| farnesyl pyrophosphate synthetase [Granulibacter bethesdensis CGDNIH1] Length = 353 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 141/320 (44%), Positives = 201/320 (62%), Gaps = 6/320 (1%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----- 61 L D+ N I+ R+ S V +IP + +++ +GGKRLRP+LTLA+A + + Sbjct: 32 LVQDDLTLCNQAIIDRMDSQVPLIPQLAAHIVAAGGKRLRPLLTLASARLCGFDTALAGG 91 Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 HV LA +EFIHTATLLHDDVVD+S +RRG +A V+GN SVLVGDFL ++AF + Sbjct: 92 VPRHVHLAACVEFIHTATLLHDDVVDESRMRRGMASANAVFGNNASVLVGDFLFARAFQL 151 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S + L LS A T+AEGE+ QL+ +L+ E YL VI+ KTA LF+AA +V Sbjct: 152 MVEDGSLQVLAILSKAAATIAEGEVLQLATQNDLETPESRYLEVIEGKTASLFAAACQVG 211 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A QAL YGM+LGIAFQL DD LDY + ++GK +G+DFR GK TLPV+ Sbjct: 212 AVVAARPAEEEQALYDYGMSLGIAFQLTDDALDYAADQRKLGKTVGDDFREGKITLPVLA 271 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF G EK FW+ TI + + ++L++A ++ + + T RA +KAK +L Sbjct: 272 AFHAGDAEEKRFWQRTIGESDQTEDDLEEALRLIARHDTIGLTLERARIMAEKAKRALDI 331 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PD+ ++SL V D+ + R Sbjct: 332 FPDTPLRRSLCAVADYTVWR 351 >gi|254418195|ref|ZP_05031919.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3] gi|196184372|gb|EDX79348.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3] Length = 324 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 147/322 (45%), Positives = 208/322 (64%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L L DM +V+ LI+ R+ SDV +IP + ++L+ +GGKRLRP+LT+A A Sbjct: 1 MNALVRLAGTDMAEVDALIIDRMQSDVPIIPKLAEHLVSAGGKRLRPLLTVAAARASGTE 60 Query: 61 GD--NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 GD + LA A+EFIHTATLLHDD+VD S LRRGKVAA L+WG TSVLVGDFL ++AF Sbjct: 61 GDILSPKKLAAAVEFIHTATLLHDDIVDASELRRGKVAAHLIWGAPTSVLVGDFLFARAF 120 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +++ET S AL L+ + ++EGE+ QL+ + +L++ + YL +I +KTA LF+AA E Sbjct: 121 ELMVETDSMRALGILAQASRVISEGEVLQLTRAHDLNLDQATYLQIISAKTAELFAAAAE 180 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 ++ AG + AL+ YGM LGIAFQL DD LDY +GKN G+DF GK TLP+ Sbjct: 181 AGAVGAGADAAATAALRDYGMALGIAFQLADDALDYGATAEALGKNAGDDFNEGKATLPL 240 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 +LA R RE +FW+ T+ G+ + E+ +A ++ + A+ T A Y +AK +L Sbjct: 241 LLAVARTRGREDDFWERTVTKGERTPEDFARARELVVGSGAIGATLDLAGDYADQAKAAL 300 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 LP S W+ +L ++ DF + R Sbjct: 301 SVLPASDWRAALEDLADFAVSR 322 >gi|162147610|ref|YP_001602071.1| octaprenyl-diphosphate synthase [Gluconacetobacter diazotrophicus PAl 5] gi|209542242|ref|YP_002274471.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161786187|emb|CAP55769.1| putative octaprenyl-diphosphate synthase [Gluconacetobacter diazotrophicus PAl 5] gi|209529919|gb|ACI49856.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 358 Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 203/324 (62%), Gaps = 4/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L D DM N I++R+ S V +IP + +L+ +GGKRLRP+LTLA A + +Y Sbjct: 33 LRDLSDYLGDDMAACNRAIVERMDSPVALIPQLAAHLVAAGGKRLRPLLTLAAARLCDYP 92 Query: 61 G----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 HV LA +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL ++ Sbjct: 93 AGPEHQRHVSLAACVEFIHTATLLHDDVVDESLLRRGLASANAVFGNKASVLVGDFLFAR 152 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 +F ++ + S + + LS + T+AEGE+ Q+S +L + E YL VI KTA LF+AA Sbjct: 153 SFQLMTDDGSLKVMAILSSASATIAEGEVLQMSTQNDLSTSVEQYLEVIHGKTAALFAAA 212 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 V +++A + AL+S+G NLG+AFQLVDD LDY + +GK +G+DFR GK TL Sbjct: 213 CRVGAVVAERPEAEELALESFGTNLGMAFQLVDDALDYAADQAVLGKTVGDDFREGKITL 272 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 PV+ A+ G + E+ FW+ I + + E+L +A ++ + A+ T RA Y Q A+D Sbjct: 273 PVLAAYAAGDEEERVFWRRVIEQSEQAPEDLDRALALIAKTDAIGVTLDRAALYAQAARD 332 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L PDS ++ L + + + R Sbjct: 333 ALEIFPDSRLRRLLQDTAAYTVSR 356 >gi|294085837|ref|YP_003552597.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665412|gb|ADE40513.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum marinum IMCC1322] Length = 357 Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 135/311 (43%), Positives = 200/311 (64%), Gaps = 6/311 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +L DM +VN I+ R+ SDV +IP + +LI SGGKR+RP++TLA A + Sbjct: 29 LTALVNLLADDMAQVNETIMARMTSDVPLIPQLAGHLITSGGKRMRPLMTLAGARIASPN 88 Query: 61 GDN----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + + LA A+EFIH+ATLLHDDV+D+S +RRG+ A +WGN SVLVGDFL ++ Sbjct: 89 TTSCSVAAIKLATAVEFIHSATLLHDDVIDESNMRRGQDTANALWGNDASVLVGDFLFAR 148 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++E+ + + L LS + + E E++Q++++ N D EDYL VI+ KTA+LF+AA Sbjct: 149 AFELMVESGNIDVLGTLSSASARITEAEIKQMTVAGNPDTRLEDYLDVIEGKTAILFAAA 208 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + I+G + QA+ YG+NLG+AFQ++DD LDY + +MGKN G+DF + K T+ Sbjct: 209 AASGARISGADEQITQAMHMYGLNLGLAFQIMDDALDYTADSAQMGKNAGDDFLDQKITM 268 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 PVILA+Q+ E+ FW TI DG + E+ KA I+ ++A+ + A SY KAK Sbjct: 269 PVILAYQKANDEERGFWHRTIGDGNFAAEDFAKAQSILSHHKAIEASLEAATSYANKAKA 328 Query: 297 SLRCL--PDSS 305 +L PD + Sbjct: 329 ALAIFDAPDQA 339 >gi|157960679|ref|YP_001500713.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345] gi|157845679|gb|ABV86178.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345] Length = 323 Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 145/322 (45%), Positives = 198/322 (61%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + LT DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+ Sbjct: 3 LNAIRQLTDSDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSILAARAIDYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GDSHLKLAAIIEFIHTASLLHDDVVDESMLRRGRKTANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E +S + LE L+ LAEGE+ QL + D TE+ Y+ VI KTA LF AA ++ Sbjct: 123 MTELRSLDVLEILADATNVLAEGEVLQLMNCNDPDTTEDSYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+A V+ AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 183 GLLADSPIEVQTALADYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G EK + I G E++ ++ AL TE RA +KA +L Sbjct: 243 AMANGNDTEKALIRDAIEKGD-GTEHIDVILAALKNCGALEYTEQRAIEESEKAIAALSI 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 +PDS +KK+L+ + QR N Sbjct: 302 IPDSDYKKALISLAKIATQRSN 323 >gi|114564252|ref|YP_751766.1| trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB 400] gi|114335545|gb|ABI72927.1| Trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB 400] Length = 323 Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 138/312 (44%), Positives = 202/312 (64%), Gaps = 5/312 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+G++H+ LA Sbjct: 13 DMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARTVDYQGEHHLKLAAI 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M+ E ++ + L Sbjct: 73 IEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELENMKVL 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ LAEGE+ QL + D TE +Y+ VI KTA LF AA +++ ++A V Sbjct: 133 QVLAHTTNVLAEGEVLQLMNCNDPDTTEANYMRVIYCKTAKLFEAATQLAGVLANVSPEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 QAL YG LG AFQL DD+LDY +E+GKNIG+D GKPTLP+I A + G+ K Sbjct: 193 EQALADYGKYLGTAFQLTDDLLDYTANADELGKNIGDDLAEGKPTLPLIYAMENGSDTAK 252 Query: 251 NFWKSTI--NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + I +DG +++ + + + E+ ALV T+ +A + QKA D+L PDS +K+ Sbjct: 253 KLIRDAIEQSDGTKAIDEI---LVALEESGALVYTQEKAQAEAQKAIDALTVFPDSDYKQ 309 Query: 309 SLMEVVDFCLQR 320 +L+ + + R Sbjct: 310 ALISLAHLSVNR 321 >gi|126726042|ref|ZP_01741884.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium HTCC2150] gi|126705246|gb|EBA04337.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium HTCC2150] Length = 332 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 137/313 (43%), Positives = 203/313 (64%), Gaps = 2/313 (0%) Query: 11 DMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +M +VN +I R+ S+ IP+V +L+ +GGKR+RPM+TLA A M Y G H+ LA Sbjct: 21 EMAQVNDMIRARMASEHAPRIPEVTAHLVEAGGKRIRPMMTLAAAKMCGYDGPYHINLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S+ RRG+ A L+W N++S+LVGD+L ++AF +++E +S Sbjct: 81 TVEFIHTATLLHDDVVDESSQRRGRATANLLWDNKSSILVGDYLFARAFQLMVEAESLTV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ LS + T+AEGE+ Q++ +++L+ E YL V++ KTA LFSAA EV +IA Sbjct: 141 LDILSNASATIAEGEVLQMTAAQDLETDEATYLKVVRGKTAALFSAATEVGGVIANAPAE 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AL +G LGI+FQ+VDD+LDY G + +GKNIG+DFR K TLPVI A E Sbjct: 201 HTKALFDFGDALGISFQIVDDLLDYDGSL-AIGKNIGDDFRERKLTLPVIKAVAMADAEE 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI GK + + A +++++ L T A + KAK SL +P S + Sbjct: 260 RAFWVKTIEKGKQDDGDFEHALSLLKKHDTLNATRTEALEWRDKAKASLSIIPQSELRDM 319 Query: 310 LMEVVDFCLQRLN 322 L+++ D+ + R++ Sbjct: 320 LLDLADYVVARIS 332 >gi|254448914|ref|ZP_05062369.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015] gi|198261451|gb|EDY85741.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015] Length = 322 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 138/316 (43%), Positives = 197/316 (62%), Gaps = 2/316 (0%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 +DL +M+ VN LI++R+ SDV +I + Y+I SGGKRLRP L + A Y+G++H Sbjct: 7 QDLIGGEMKAVNALIVERLKSDVALINQLGHYIIQSGGKRLRPQLAVLAARAAGYQGEDH 66 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + +A IEFIHTATLLHDDVVD S LRRG+ A V+GN+ +VLVGDFL S++F M++E Sbjct: 67 LQIAAIIEFIHTATLLHDDVVDASELRRGRETANAVFGNEAAVLVGDFLYSRSFEMMVEL 126 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 S + LS +AEGE+ QL + D TE YL VI SKTA LF AA + ++++ Sbjct: 127 DSMRIMSILSRATNVIAEGEVMQLLNIHDADTTEARYLEVIHSKTAKLFEAATRIGAVLS 186 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G+ QAL YGM+LG AFQL+DDVLDY + + MGKN+G+D GKPTLP+I A + Sbjct: 187 GLPQEKEQALADYGMHLGTAFQLIDDVLDYSADADAMGKNVGDDLAEGKPTLPLIYAMRE 246 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 G++ E + I +G ++ + ++ AL T A A ++ CLPDS Sbjct: 247 GSEDEAALIRRAIENG--GLDEIDAVLAAIQSTGALEFTRRAAQREADAAVAAVGCLPDS 304 Query: 305 SWKKSLMEVVDFCLQR 320 ++++L+ + F + R Sbjct: 305 EYRQALIALAQFSVDR 320 >gi|260576245|ref|ZP_05844237.1| Polyprenyl synthetase [Rhodobacter sp. SW2] gi|259021513|gb|EEW24817.1| Polyprenyl synthetase [Rhodobacter sp. SW2] Length = 333 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 137/312 (43%), Positives = 200/312 (64%), Gaps = 1/312 (0%) Query: 11 DMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM VN LI +R+ S+ IP V +L+ +GGKRLRP+LTLA A + Y G HV LA Sbjct: 21 DMLAVNVLIRERMASEHAPRIPQVTAHLVEAGGKRLRPLLTLAAARLCGYGGPFHVHLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S+ RRG+ A L+W N++SVLVGD+L +++F +++E + Sbjct: 81 TVEFIHTATLLHDDVVDESSRRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVEPGNLRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ + ++AEGE+ QL+ +++L TE YL V++ KTA LFSAA EV +IAG Sbjct: 141 LDILANASASIAEGEVLQLTAAQDLATTEAIYLQVVRGKTAALFSAATEVGGVIAGAPAD 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AL +YG LG+AFQ+VDD+LDY G +GK++G+DFR K TLPVI A + E Sbjct: 201 QVKALFTYGDALGVAFQIVDDLLDYGGVAATIGKDVGDDFRERKLTLPVIKAVAKADAEE 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW I G + +L++A ++ + AL A + A+D+L LP + Sbjct: 261 RAFWVRVIEKGHQAEGDLEQAQALLARHGALQAARVDALHWAATARDALAVLPAHPLRTM 320 Query: 310 LMEVVDFCLQRL 321 L ++ DF ++R+ Sbjct: 321 LEDLADFVVERI 332 >gi|159045612|ref|YP_001534406.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12] gi|157913372|gb|ABV94805.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12] Length = 334 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 137/275 (49%), Positives = 186/275 (67%), Gaps = 1/275 (0%) Query: 10 KDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +DM+ VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLATA + Y G HV LA Sbjct: 21 EDMDAVNVLIRERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLATARLCGYTGPYHVHLA 80 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S RRG+ A L+W NQ+SVLVGD+L +++F +++ET S Sbjct: 81 ATVEFIHTATLLHDDVVDESNQRRGRPTANLLWDNQSSVLVGDYLFARSFQLMVETGSLR 140 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L+ L+ A T+AEGE+ QLS +++L E+ YL V++ KTA LFSAA EV +IAG Sbjct: 141 VLDILANAAATIAEGEVLQLSAAQDLATDEDIYLKVVRGKTAALFSAATEVGGVIAGADE 200 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + +AL +YG LGIAFQ+VDD+LDY G+ + GKNIG+DFR K TLPVI A + Sbjct: 201 AQVRALFTYGDALGIAFQIVDDLLDYGGDSTKTGKNIGDDFRERKLTLPVIKAVAKADLE 260 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283 E+ FW I G +L+ A ++ + A+ T Sbjct: 261 ERAFWSRVIEKGDQRDGDLEHALALLDRHGAMAAT 295 >gi|224588345|gb|ACN58969.1| octaprenyl diphosphate synthase [uncultured bacterium BLR10] Length = 348 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 135/310 (43%), Positives = 203/310 (65%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN +I +++ S+V ++ + +Y+I +GGKR+RP+L L A Y+G H LA Sbjct: 39 DMDAVNTVIRRKLHSEVSLVNQIAEYIISAGGKRIRPVLVLLVANAYSYKGTAHHELAAV 98 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S+LRRG+ A ++GN SVLVGDFL S+AF M++ + + Sbjct: 99 VEFIHTATLLHDDVVDESSLRRGRATANALFGNAASVLVGDFLYSRAFQMMVGLNNMRVM 158 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QL + DV++E YL VI+SKTA LF AA E+ +L++G ++ Sbjct: 159 QILSDATNVIAEGEVLQLLNMHDPDVSQERYLQVIRSKTAKLFEAAAELGALVSGANDAQ 218 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A YG +LG AFQL+DDVLDY G+ NE+GKN+G+D R GKPTLP+I + GT ++ Sbjct: 219 IEAAGEYGRSLGTAFQLIDDVLDYAGDANEIGKNVGDDLREGKPTLPLIYLMENGTPEQR 278 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 +S I G ++ + + AL T +A + ++A +++ LPDS +K+SL Sbjct: 279 ELVRSCIEQGD--EQHFDTILAAITSSGALEYTRQQAVTAAKRAAEAIAGLPDSIYKESL 336 Query: 311 MEVVDFCLQR 320 +++ DF + R Sbjct: 337 LQLADFSVNR 346 >gi|330994653|ref|ZP_08318576.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1] gi|329758294|gb|EGG74815.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1] Length = 334 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 136/325 (41%), Positives = 203/325 (62%), Gaps = 4/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L + DM N I++R+ S V +IP + +L+ +GGKRLRP+LTLA+A + Y+ Sbjct: 9 LRDLAEYLADDMAACNRAIVERMDSPVALIPQLAAHLVAAGGKRLRPLLTLASARLCGYQ 68 Query: 61 GD----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 D HV LA +EFIHTATLLHDDVVD+S+LRRG +A V+GN+ SVLVGDFL ++ Sbjct: 69 PDATHQRHVGLAACVEFIHTATLLHDDVVDESSLRRGMASANAVFGNKASVLVGDFLFAR 128 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 +F ++ + S + + LS + T+AEGE+ Q+S +L + YL VI KTA LF+AA Sbjct: 129 SFQLMTDDGSLKVMNILSSASATIAEGEVLQMSTQNDLSTRIDQYLEVIHGKTAALFAAA 188 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 V +++A +V +AL+SYG NLG+AFQLVDD LDY + +GK +G+DFR GK TL Sbjct: 189 CRVGAVVAERDETVERALESYGTNLGMAFQLVDDALDYAADQARLGKTVGDDFREGKITL 248 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 PV+ A+ G++ ++ FW+ I + E+L A ++ A+ T RA Y A++ Sbjct: 249 PVLAAYAAGSEEDRAFWQRVIERSEQQPEDLDHALQLIARTDAIRITLDRATEYADAARE 308 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321 +L P ++ L + + + RL Sbjct: 309 ALSIFPPGHLRQLLQDTASYTVSRL 333 >gi|311693395|gb|ADP96268.1| trans-hexaprenyltranstransferase [marine bacterium HP15] Length = 322 Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 138/317 (43%), Positives = 197/317 (62%), Gaps = 2/317 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D D +VN LI++R+ SDV ++ + +Y+I SGGKRLRP+L L ++ Y ++H+ Sbjct: 8 DTVADDFSRVNDLIIQRLSSDVPLVEKIAQYIIESGGKRLRPLLVLLSSQAAGYEENDHL 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL ++AF M++E K Sbjct: 68 KLAAVIEFLHTATLLHDDVVDTSDMRRGRSTANARWGNAPSVLVGDFLYARAFEMMVELK 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S ++ LS +AEGE+ QL KN D+TEE Y+ VI +KTA+LF AA +L+A Sbjct: 128 SLRIMDVLSHATAVIAEGEVMQLMNVKNPDLTEEQYMKVIHNKTAMLFEAASHTGALLAH 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 LK YG +LG+AFQLVDDVLDY+G+ MGKN+G+D GK TLP+I A G Sbjct: 188 ASAEQELGLKDYGKHLGLAFQLVDDVLDYQGDAEAMGKNVGDDLAEGKTTLPLIHAMSHG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T E+ + I G +++L + I+ + A+ T +A + A+ L LPDS Sbjct: 248 TGEERQLIRQAIRKG--GLDDLPRILDIVERSGAIEYTMAKAREQAELAQTCLLSLPDSG 305 Query: 306 WKKSLMEVVDFCLQRLN 322 K+++ + + + R++ Sbjct: 306 HKEAMELLTEVAVARVS 322 >gi|212636824|ref|YP_002313349.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3] gi|212558308|gb|ACJ30762.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3] Length = 323 Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 143/310 (46%), Positives = 193/310 (62%), Gaps = 1/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y G++H+ LA Sbjct: 13 DMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSILAARAIDYNGESHLKLAAI 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M+ E KS E L Sbjct: 73 IEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELKSLEVL 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E L+ LAEGE+ QL + D TE+ Y+ VI KTA LF AA ++ L+A V Sbjct: 133 EILADATNVLAEGEVLQLMNCNDPDTTEDSYMRVIYCKTAKLFEAATRLAGLLAESSEEV 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + AL YG LG AFQL DD+LDY E E+GKNIG+D GKPTLP+I A G+ EK Sbjct: 193 QTALAEYGKFLGTAFQLTDDLLDYTAETEELGKNIGDDLAEGKPTLPLIFAMANGSDTEK 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G E+++ ++ AL TE RA KA +L LP+S +K +L Sbjct: 253 ALIREAIEKGD-GTEHIEVILSALKSCGALEYTEQRAIEESNKAIAALNILPESEYKTAL 311 Query: 311 MEVVDFCLQR 320 + + +QR Sbjct: 312 VSLAKIAVQR 321 >gi|296116309|ref|ZP_06834925.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295977128|gb|EFG83890.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 334 Score = 265 bits (677), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 136/315 (43%), Positives = 197/315 (62%), Gaps = 4/315 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD----NHVL 66 DM N I++R+ S V +IP + +L+ +GGKRLRP+LTLA+A + Y D HV Sbjct: 19 DMAACNRAIVERMDSPVALIPQLAAHLVAAGGKRLRPLLTLASARLCGYEPDATHQRHVA 78 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG +A ++GN+ SVLVGDFL +++F ++ + S Sbjct: 79 LAACVEFIHTATLLHDDVVDESTLRRGLASANAIFGNKASVLVGDFLFARSFQLMTDDGS 138 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + + LS + T+AEGE+ Q+S +L + E YL VI KTA LF+AA V +++A Sbjct: 139 LKVMNILSSASATIAEGEVLQMSTQNDLSTSIEKYLEVIHGKTAALFAAACRVGAVVADQ 198 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 V +AL SYG NLG+AFQLVDD LDY + +GK IG+DFR GK TLPV+ A+ G Sbjct: 199 PLKVEEALDSYGTNLGMAFQLVDDALDYAADQATLGKTIGDDFREGKITLPVLTAYNAGD 258 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++++ FW+ I + + + ++L A ++ A+ T A Y + A +L P S Sbjct: 259 EKDRVFWRRVIEESEQTPDDLDHALELIARTNAIGITLDHATRYAEAASQALDIFPHSRL 318 Query: 307 KKSLMEVVDFCLQRL 321 K+ L + + + RL Sbjct: 319 KQLLQDTASYTVSRL 333 >gi|90020654|ref|YP_526481.1| phage tail region protein [Saccharophagus degradans 2-40] gi|89950254|gb|ABD80269.1| Trans-hexaprenyltranstransferase [Saccharophagus degradans 2-40] Length = 320 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 136/320 (42%), Positives = 210/320 (65%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + +D +VN LI+ ++ SDV ++ ++ Y++ +GGKRLRP+L L TA L Y Sbjct: 1 MQSFYKVVQEDFAEVNTLIVNQLHSDVGLVENIGHYIVDAGGKRLRPLLVLLTARALGYN 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ L+ IEFIHTATLLHDDVVD SALRRG+ A WGN SVLVGDFL S+AF M Sbjct: 61 GNQHLSLSAIIEFIHTATLLHDDVVDVSALRRGRPTANANWGNAPSVLVGDFLYSRAFQM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E ++ L+ ++EGE++QL ++N +VTE++Y+ VI KTA LF AA E + Sbjct: 121 MVEIGEMGIMKELANTTNVISEGEVQQLVNARNPEVTEQNYMTVIHKKTAALFEAACETA 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + +A++SYG +LG+AFQLVDDVLDY+G+ E+GKN+G+D GKPTLP+I Sbjct: 181 AILAGADAATCKAVRSYGYHLGVAFQLVDDVLDYQGDAEELGKNVGDDLAEGKPTLPLIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 G+ E K I + S++ L++ I++ L T+ A + +AK ++ Sbjct: 241 TINNGSAEEAELVKQAIINS--SLDKLQQIVDIVQRRGGLEYTQQCAQDHINRAKQAIAL 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ ++ ++ ++ DF ++R Sbjct: 299 LPETEFRSAMEDLADFAIKR 318 >gi|323961158|gb|EGB56772.1| polyprenyl synthetase [Escherichia coli H489] Length = 323 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M R+L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACRSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|256822892|ref|YP_003146855.1| polyprenyl synthetase [Kangiella koreensis DSM 16069] gi|256796431|gb|ACV27087.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069] Length = 323 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 134/317 (42%), Positives = 197/317 (62%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + DL + + N +I+ R+ SDV ++ V Y++ +GGKRLRPML L A L Y+G Sbjct: 7 IRDLVADEFDTTNQIIIDRLQSDVVLVNQVGHYIVAAGGKRLRPMLLLLAAKSLNYQGKF 66 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H LA IE IHTATLLHDDVVD+S LRRG+ A ++GNQ SVLVGD+L S++F M++E Sbjct: 67 HPNLAAVIELIHTATLLHDDVVDESDLRRGRQTANAMFGNQASVLVGDYLYSRSFQMMVE 126 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +E LS +A GE+ QL + DV E Y VI+ KTA+LF+AA ++++++ Sbjct: 127 VGEMRVMEVLSETTNEVAAGEVLQLMNVNDPDVDEASYYQVIERKTAILFAAATQLAAIL 186 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V + L+ YG+ LG AFQLVDD LDY + E+GKN+G+D GKPTLP+I A Q Sbjct: 187 AGASKDVEEGLREYGLQLGNAFQLVDDALDYAADTEELGKNVGDDLAEGKPTLPLIYAMQ 246 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G+ + + I G ++N+ I+++ A+ T A KA +L+ LP+ Sbjct: 247 HGSDTDAQMIRQAIEQG--GLDNMDAILRIIQDTGAIEYTYQSAEKAVAKAISALKPLPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+++ + L+R Sbjct: 305 SQYKQALIDIANLSLKR 321 >gi|329113331|ref|ZP_08242112.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001] gi|326697156|gb|EGE48816.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001] Length = 356 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 138/324 (42%), Positives = 196/324 (60%), Gaps = 4/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L D DM N +I+ R+ S V +IP + +L+ +GGKRLRP+LTLA A M Y Sbjct: 31 LKALADYLASDMLACNQVIVDRMQSPVALIPQLAAHLVAAGGKRLRPLLTLAAARMCGYN 90 Query: 61 GDN----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + HV +A +EFIHTATLLHDDVVDDS LRRG +A ++GN+ SVLVGDFL ++ Sbjct: 91 NQDGRMRHVEIAACVEFIHTATLLHDDVVDDSQLRRGLASANAIFGNKASVLVGDFLFAR 150 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 +F ++ S + LS + TLAEGE+ Q++ +L + + YL VI KTA LF+AA Sbjct: 151 SFQILTADASLGVMAILSAASATLAEGEVMQMTTQNDLSTSVDQYLQVIYGKTAALFAAA 210 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 E ++I R+AL+ YG NLG+AFQLVDD LDY + +GK +G+DFR GK TL Sbjct: 211 CESGAVIGEATPEQREALRMYGANLGMAFQLVDDALDYAADQATLGKEVGDDFREGKVTL 270 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 PV+ A++ G + ++ FW+ I + +L+ A + E A+ T A Y KA++ Sbjct: 271 PVLAAYEAGNEEDRIFWRRVIEECDQHPGDLEAALGRIAETNAIGITLKCAEDYAAKARE 330 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L PD + K L+E + R Sbjct: 331 NLSMFPDDTLKNLLLETASYSASR 354 >gi|237809123|ref|YP_002893563.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187] gi|237501384|gb|ACQ93977.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187] Length = 323 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 138/319 (43%), Positives = 199/319 (62%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 +++ L DM+ VN LI +R+ SDV ++ + Y+I GGKR+RP+L + +A + Y+G Sbjct: 4 QVIRTLADDDMQAVNQLIYQRLQSDVALVNQLAYYIISGGGKRIRPLLAVLSARAIGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H+ LA IEFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL ++AF M+ Sbjct: 64 DAHISLATIIEFIHTATLLHDDVVDESVLRRGRDTANQLFGNAASVLVGDFLHTRAFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E + ++ LS +AEGE+ QL + TE++YL VI KTA LF AA ++ Sbjct: 124 VELGNMRIMQLLSEATNLIAEGEVMQLMNCNDPSTTEDNYLQVIYCKTAKLFEAATHCAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A + QAL+ YG LG AFQL+DDV+DY MGKN+G+D GKPTLP+I A Sbjct: 184 ILANQPAHIEQALRDYGKYLGTAFQLIDDVMDYSSSSETMGKNVGDDLSEGKPTLPLIYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 +GT +K + I + + +E L + I+++ AL T RA +KA D+L L Sbjct: 244 MVQGTPEQKKRIEQAITE-RDGMEYLDEILDILQQTHALEYTVTRAEQEARKAIDALSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS +K +L + + + R Sbjct: 303 PDSDYKTALQALAESAVHR 321 >gi|284006654|emb|CBA71916.1| octaprenyl-diphosphate synthase [Arsenophonus nasoniae] Length = 323 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 140/317 (44%), Positives = 195/317 (61%), Gaps = 1/317 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT KDME VN IL ++ SDV +I + Y+I GGK++RPM+ + L Y G H+ Sbjct: 8 NLTAKDMEAVNKAILNQLNSDVHLINQLGHYIISGGGKKIRPMIAILVGRALGYEGKKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S LRRGK A V+GN SVLVGDF+ +++F M+ E Sbjct: 68 NVAALIEFIHTATLLHDDVVDESTLRRGKKTANAVFGNAASVLVGDFIYTRSFQMMTELD 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L+ +S +AEGE+ QL N D+TE Y+ +I SKTA LF AA S++++G Sbjct: 128 SMPILKLMSDATNVIAEGEVSQLINCNNPDITESTYMQIIYSKTARLFEAATHASAIVSG 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + +QAL+ YG LG AFQL+DD+LDY + +GKNIG+D GK TLP++ A ++G Sbjct: 188 ANETQQQALRDYGRYLGTAFQLIDDLLDYDADSTTIGKNIGDDLDEGKLTLPLLHAMKKG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T E +++I G L I M+ +L T RA KA +L LPD+S Sbjct: 248 TAEESALIRNSIEKGN-GRHLLSAILITMKRCGSLEYTRDRAREEADKAIKALDILPDTS 306 Query: 306 WKKSLMEVVDFCLQRLN 322 +K +L+ + +QRL+ Sbjct: 307 YKDALISLACISVQRLS 323 >gi|167622844|ref|YP_001673138.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] gi|167352866|gb|ABZ75479.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] Length = 323 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 143/322 (44%), Positives = 196/322 (60%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + LT DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+ Sbjct: 3 LNAIRQLTDSDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSILAARAIDYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GDSHLKLAAIIEFIHTASLLHDDVVDESMLRRGRKTANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E K + LE L+ LAEGE+ QL + D TE+ Y+ VI KTA LF AA ++ Sbjct: 123 MTELKCLDVLEILADATNVLAEGEVLQLMNCNDPDTTEDSYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+A V+ AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 183 GLLADSPIEVQTALAEYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G EK + I G E+++ + AL TE RA +KA +L Sbjct: 243 AMANGNDTEKALIREAIEKGD-GTEHIEVILAALNNCGALKYTEQRAIEESEKAIAALAI 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 +P+S +K +L+ + QR N Sbjct: 302 IPESDYKTALISLAKLATQRSN 323 >gi|307543898|ref|YP_003896377.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581] gi|307215922|emb|CBV41192.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581] Length = 333 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 135/311 (43%), Positives = 188/311 (60%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D VN I ++ S + ++ + +Y++ SGGKR+RP+L L A L Y GD HV LA Sbjct: 23 EDFAAVNRTIQTQLASRIPLVEAIGQYIVDSGGKRMRPLLVLLAARSLGYEGDQHVALAT 82 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEF+HT+TLLHDDVVD+S +RRG+ A WGN SVLVGDFL S++F M++ S Sbjct: 83 LIEFMHTSTLLHDDVVDESHMRRGRATANDAWGNAPSVLVGDFLYSRSFQMMVGVGSMRI 142 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS CT+AEGE++QL+ N DV E Y I+ KTA+LF AA ++IA Sbjct: 143 MEILSAATCTIAEGEVQQLTNVGNPDVDEAAYFETIQGKTAMLFEAASHCGAIIADATPE 202 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL++YG LG+AFQLVDD+LDYRG+ + MGKN+G+D GKPTLP+I A G+ + Sbjct: 203 QEAALQAYGRYLGLAFQLVDDLLDYRGDADTMGKNVGDDLAEGKPTLPLIQAMVTGSPEQ 262 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + E L + I+ + AL T+ RA KA L LP S ++ S Sbjct: 263 AKVIRQAIRQGGL--ERLDEVLAIVHDTGALDYTQRRAEEMSAKALAQLEVLPPSVFRDS 320 Query: 310 LMEVVDFCLQR 320 + ++ + R Sbjct: 321 MEQLAHRAVDR 331 >gi|283788174|ref|YP_003368039.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168] gi|282951628|emb|CBG91328.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168] Length = 323 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 200/320 (62%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG ++ + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCSDAQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMRHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQT 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|117926629|ref|YP_867246.1| trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1] gi|117610385|gb|ABK45840.1| Trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1] Length = 331 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 136/318 (42%), Positives = 205/318 (64%), Gaps = 1/318 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGD 62 L L +D+++ N +IL+++ S VE+I V +L+ SGGKRLRP+LTL TA + Y + D Sbjct: 12 LRSLVEQDLQRTNEVILEQLNSPVELITQVGDHLLNSGGKRLRPILTLVTAKLFGYQKAD 71 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 H LLA +EFIHTATLLHDDVVD S RRG+ A VWGN+ +LVGDFL S++F +++ Sbjct: 72 VHALLAAVVEFIHTATLLHDDVVDKSNTRRGQATANSVWGNKAPILVGDFLFSRSFQIMV 131 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E L +S ++EGE+ QL S +L EE YL VI+ KTA LF++A ++ ++ Sbjct: 132 EHGDLRVLRIVSDCCAIISEGEVMQLVASNDLATDEERYLDVIRHKTASLFASASQLGAV 191 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +A + + Q + YGM LG A+Q+VDD+LDY E ++GKN+G+DF+ GK TLPVI AF Sbjct: 192 VADQSDEIAQRMYDYGMMLGTAYQVVDDLLDYSAETEKLGKNVGDDFQEGKITLPVIHAF 251 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + G E+ FW+ + D + + A ++ ++ +L T +A + KAK +L LP Sbjct: 252 RSGDAEEQAFWRRCLEDEEQDESSFDHARALIAKHGSLDYTMSQARALIVKAKAALAPLP 311 Query: 303 DSSWKKSLMEVVDFCLQR 320 +S+ +++LM++ D + R Sbjct: 312 ESAERQALMDLADLSVDR 329 >gi|310815063|ref|YP_003963027.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25] gi|308753798|gb|ADO41727.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25] Length = 325 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 139/310 (44%), Positives = 194/310 (62%), Gaps = 2/310 (0%) Query: 14 KVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 KVN + + SD I V +LI +GGKRLRPMLT+A A + Y G +H+ LA +E Sbjct: 17 KVNETLHSYMQSDAAPRIRQVSAHLIDAGGKRLRPMLTVAAARLCGYDGPHHIHLAATVE 76 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 FIHTATLLHDDVVDDS RRG+ A L+W N +SVLVGD+L S+AF ++ T S L A Sbjct: 77 FIHTATLLHDDVVDDSKQRRGRPTANLLWDNMSSVLVGDYLFSRAFQLMTITGSMPILAA 136 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L+ + T+AEGE+ QLS +++L T E Y+ + + KTA LFSAA V +++A +++ Q Sbjct: 137 LADASATIAEGEVLQLSTARDLSATPETYIRIARGKTAALFSAATRVGAMLAEPGDAIVQ 196 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 A+ YG LGIAFQ+ DD+LDY G + +GKN G+D R GK TLPVI A + E+ F Sbjct: 197 AMHDYGDALGIAFQIADDLLDYTG-TDAIGKNRGDDLREGKLTLPVIWALDKADAAERAF 255 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 W TI G + + A IM + +L+ T A + AK +L+ LP +++L E Sbjct: 256 WTRTIGKGDVQDGDFDAALSIMDKRGSLLATADEARRWAGLAKAALQALPPQPLRETLEE 315 Query: 313 VVDFCLQRLN 322 + D+ + RL+ Sbjct: 316 LADYVVARLS 325 >gi|53802938|ref|YP_115384.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str. Bath] gi|53756699|gb|AAU90990.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str. Bath] Length = 340 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 139/306 (45%), Positives = 199/306 (65%), Gaps = 2/306 (0%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 V+ LIL+ + SDV +I + +Y++ SGGKRLRPML L +A L Y GD+H+ LA IEFI Sbjct: 35 VDSLILRELHSDVVLINQIGQYIVGSGGKRLRPMLHLLSAKALGYPGDHHITLAAVIEFI 94 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATLLHDDVVD+SALRRG+ +A +WGN SVLVGD+L S++F +++ + ++ LS Sbjct: 95 HTATLLHDDVVDESALRRGQDSANALWGNSASVLVGDYLYSRSFELMVRVQDMRVMDILS 154 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 +AEGE+ QL N E YL VI KTA+LFSAA ++++++AG ++V ++L Sbjct: 155 RTTTAIAEGEVLQLLNCNNPATDEGRYLDVISRKTAILFSAAAQLAAVLAGSSHAVEESL 214 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 K+YG LGIAFQL DDVLDY+ + E GKN+G+D GKPTLP+I A + + E + Sbjct: 215 KNYGTYLGIAFQLKDDVLDYKADPEEWGKNLGDDLAEGKPTLPLIYALSQSSGAEAELLR 274 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 I G+ E+ KK + ++ A+ TE RA KA + + LP+S +K +L+ + Sbjct: 275 QAIEHGE--REHFKKVYAVIESTDAISYTERRARDAANKAIEQVTHLPESGYKDALIALA 332 Query: 315 DFCLQR 320 F + R Sbjct: 333 RFAVDR 338 >gi|331684834|ref|ZP_08385426.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H299] gi|331078449|gb|EGI49655.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H299] Length = 323 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN TSVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNATSVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|124265703|ref|YP_001019707.1| dimethylallyltransferase [Methylibium petroleiphilum PM1] gi|124258478|gb|ABM93472.1| Dimethylallyltransferase [Methylibium petroleiphilum PM1] Length = 330 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 141/314 (44%), Positives = 195/314 (62%), Gaps = 5/314 (1%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL DM +V+ LI +R+ SDV +I + Y+I +GGKRLRPML L A L +RG Sbjct: 16 DLVAADMGEVDALIRRRLASDVALINQISHYIISAGGKRLRPMLVLLFAQALGFRGPERF 75 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA +EFIHTATLLHDDVVD+SALRRG+ A +GN SVLVGDFL S+AF M++ Sbjct: 76 ELAATVEFIHTATLLHDDVVDESALRRGRDTANARFGNAASVLVGDFLYSRAFQMMVSVN 135 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 LE L+ +AEGE+ QL + D++ +DYL VI+ KTA LF A+ + +++A Sbjct: 136 RMRVLEVLADATNVIAEGEVLQLMNMHDPDLSIDDYLRVIRFKTAKLFEASARLGAMLAD 195 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 V A YG LG AFQLVDD+LDY G + +GKNIG+D R GKPTLP+++A RG Sbjct: 196 ASPGVETACADYGRALGTAFQLVDDLLDYEGATSALGKNIGDDLREGKPTLPLLVAMTRG 255 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T +++ ++ I G+ V+ L + I+R AL T A + +A ++L LPDS Sbjct: 256 TPAQRDVVRAAIEQGE--VQRLPEIIEIVRSTGALEATREVARAEVARACEALSVLPDSQ 313 Query: 306 WKKSLMEVVDFCLQ 319 ++++L+ C Q Sbjct: 314 YREALLH---LCAQ 324 >gi|89093572|ref|ZP_01166520.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92] gi|89082262|gb|EAR61486.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92] Length = 322 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 138/308 (44%), Positives = 197/308 (63%), Gaps = 2/308 (0%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 E VN I+ + S+V ++ + Y++ SGGKRLRP+L L A Y+GD HV LA IE Sbjct: 15 EAVNDYIINHLGSNVPLVEKIGHYIVESGGKRLRPLLVLLAANAAGYKGDKHVPLAAIIE 74 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 FIHTATLLHDDVVD+S LRRGK A WGN SVLVGDFL S+AF +++E S + +E Sbjct: 75 FIHTATLLHDDVVDNSDLRRGKDTANAKWGNAPSVLVGDFLYSRAFQIMVEIGSMQIMEV 134 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +S +AEGE+ QL +KN D TEE Y+ VI KTA+LF AA E +++A R+ Sbjct: 135 ISNATNVIAEGEVLQLLNTKNPDTTEEAYMQVILGKTAMLFEAATEAGAILADATAEERE 194 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+ YG++LG AFQL+DDV+DY EMGKN+G+D GK TLP+I A + G + ++ Sbjct: 195 GLRLYGLHLGTAFQLIDDVMDYLSTAEEMGKNVGDDLAEGKATLPLIHAMRAGNEEQRLL 254 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 + I G +++L+ I++E A+ T+ +A KA +L L DSS+K++L++ Sbjct: 255 VRQAIRKG--GLDDLQPIMDIVKETGAIEYTQQKAQEEADKAIAALSALSDSSFKETLVQ 312 Query: 313 VVDFCLQR 320 + + ++R Sbjct: 313 LANMAVKR 320 >gi|15803727|ref|NP_289761.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 EDL933] gi|15833320|ref|NP_312093.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. Sakai] gi|168751593|ref|ZP_02776615.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4113] gi|168754169|ref|ZP_02779176.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4401] gi|168765367|ref|ZP_02790374.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4501] gi|168769043|ref|ZP_02794050.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4486] gi|168778214|ref|ZP_02803221.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4196] gi|168781331|ref|ZP_02806338.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4076] gi|168786073|ref|ZP_02811080.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC869] gi|168800901|ref|ZP_02825908.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC508] gi|195940043|ref|ZP_03085425.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. EC4024] gi|208813351|ref|ZP_03254680.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4045] gi|208818474|ref|ZP_03258794.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4042] gi|209396313|ref|YP_002272657.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4115] gi|217327318|ref|ZP_03443401.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. TW14588] gi|254795136|ref|YP_003079973.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. TW14359] gi|261228198|ref|ZP_05942479.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. FRIK2000] gi|261255054|ref|ZP_05947587.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. FRIK966] gi|12517802|gb|AAG58321.1|AE005547_7 octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. EDL933] gi|13363539|dbj|BAB37489.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. Sakai] gi|187766779|gb|EDU30623.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4196] gi|188014375|gb|EDU52497.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4113] gi|189001013|gb|EDU69999.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4076] gi|189358538|gb|EDU76957.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4401] gi|189361792|gb|EDU80211.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4486] gi|189364885|gb|EDU83301.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4501] gi|189374093|gb|EDU92509.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC869] gi|189376838|gb|EDU95254.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC508] gi|208734628|gb|EDZ83315.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4045] gi|208738597|gb|EDZ86279.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4042] gi|209157713|gb|ACI35146.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4115] gi|209758168|gb|ACI77396.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209758170|gb|ACI77397.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209758172|gb|ACI77398.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209758176|gb|ACI77400.1| octaprenyl diphosphate synthase [Escherichia coli] gi|217319685|gb|EEC28110.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. TW14588] gi|254594536|gb|ACT73897.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. TW14359] gi|320189540|gb|EFW64199.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC1212] gi|320640258|gb|EFX09830.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. G5101] gi|320645555|gb|EFX14564.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str. 493-89] gi|320650865|gb|EFX19322.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str. H 2687] gi|320666771|gb|EFX33750.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. LSU-61] gi|326337887|gb|EGD61721.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. 1125] gi|326347457|gb|EGD71182.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. 1044] Length = 323 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G LK M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLKPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|300309704|ref|YP_003773796.1| octaprenyldiphosphate synthase [Herbaspirillum seropedicae SmR1] gi|300072489|gb|ADJ61888.1| octaprenyldiphosphate synthase protein [Herbaspirillum seropedicae SmR1] Length = 309 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 139/309 (44%), Positives = 200/309 (64%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 ME VN +I +++ S+V ++ V +Y+I +GGKRLRP+L + A Y+G++H LA I Sbjct: 1 MEAVNAVIRRQLYSEVPLVNQVAEYIISAGGKRLRPVLVVLIANAFGYKGEHHHSLAAVI 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S+LRRGK A ++GN SVLVGDFL S+AF M++ + +E Sbjct: 61 EFIHTATLLHDDVVDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVAVGNPRVME 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 ++ +AEGE+ QL N DV E YL VI+SKTA LF AA ++ +LIAG + Sbjct: 121 IVADATNVIAEGEVLQLLNMHNPDVDENGYLQVIRSKTAKLFEAASQIGALIAGADEAGI 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A YG ++G AFQL+DDVLDY G E+GKN+G+D R GKPTLP+I Q GT +++ Sbjct: 181 EAAAEYGRSIGTAFQLIDDVLDYSGNSAEIGKNVGDDLREGKPTLPLIWLMQHGTPQQRE 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 ++ I +G ++ + + + AL T +A ++A D++ LPDS +KKSL+ Sbjct: 241 LVRTCIENG--DEQHFDEVLSAITHSGALAYTREQAEIAARRAADAIISLPDSQFKKSLL 298 Query: 312 EVVDFCLQR 320 E+ F + R Sbjct: 299 ELSAFAVDR 307 >gi|254785128|ref|YP_003072556.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901] gi|237684423|gb|ACR11687.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901] Length = 320 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 138/320 (43%), Positives = 201/320 (62%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + D + VN LI+ ++ SDV+++ ++ +Y++ +GGKRLRP+L L A L Y+ Sbjct: 1 MQSFHKVVEADFDAVNRLIVAKLHSDVDLVENIGQYIVDAGGKRLRPLLVLLAAKALGYQ 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ LA IEFIHTATLLHDDVVD SALRRG+ +A WGN SVLVGDFL S+AF M Sbjct: 61 GQQHIELAAIIEFIHTATLLHDDVVDVSALRRGRPSANAQWGNAPSVLVGDFLYSRAFQM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + + +S ++EGE++QL +K+ DVTE++Y+ VI KTA LF AA E Sbjct: 121 MVGVGNIDVMAIMSDTTNVISEGEVQQLVNAKDPDVTEQNYMAVIHKKTAALFEAACETG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IAGV + R ++K G +LG+AFQLVDD LDY G +GKN+G+D GKPTLP+I Sbjct: 181 AVIAGVSSEQRASIKQIGYHLGVAFQLVDDALDYHGNTESLGKNVGDDLAEGKPTLPLIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +GT E ++ I G V+ L++ I+RE L T A + +A + Sbjct: 241 TMAQGTPEEAALIRTAIQQG--GVDKLQQIISIVRERGGLEYTMRCANRHADEALTLIDQ 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L ++ F + R Sbjct: 299 LPTSPFQSALADLTRFSVSR 318 >gi|208809557|ref|ZP_03251894.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4206] gi|208729358|gb|EDZ78959.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4206] Length = 324 Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 136/319 (42%), Positives = 194/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y G Sbjct: 5 KKYNELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEG 64 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+ Sbjct: 65 NAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMM 124 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 125 TSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSG 184 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ A Sbjct: 185 ILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHA 244 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 GT + ++ I G LK M +L T RA KA +L+ L Sbjct: 245 MHHGTPEQAQMIRTAIEQGN-GRHLLKPVLEAMNACGSLEWTRQRAEEEADKAIAALQVL 303 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PD+ W+++L+ + +QR Sbjct: 304 PDTPWREALIGLAHIAVQR 322 >gi|307262498|ref|ZP_07544143.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306867875|gb|EFM99706.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 331 Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 135/324 (41%), Positives = 204/324 (62%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESNMRRGRATANATFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AF----QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A ++G + + + +S I +G E + IM E+++L RA QKA D Sbjct: 247 AMHTAQEKGNQAQVDMIRSAIENGG-EREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVD 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LP+S +K++L+ + + R Sbjct: 306 ALAVLPESEYKQALISLAYLSVDR 329 >gi|258542159|ref|YP_003187592.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256633237|dbj|BAH99212.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256636296|dbj|BAI02265.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-03] gi|256639349|dbj|BAI05311.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-07] gi|256642405|dbj|BAI08360.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-22] gi|256645460|dbj|BAI11408.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-26] gi|256648513|dbj|BAI14454.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-32] gi|256651566|dbj|BAI17500.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654557|dbj|BAI20484.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-12] Length = 356 Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 138/324 (42%), Positives = 195/324 (60%), Gaps = 4/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L D DM N +I+ R+ S V +IP + +L+ +GGKRLRP+LTLA A M Y Sbjct: 31 LKALADYLASDMLACNQVIVDRMQSPVALIPQLAAHLVAAGGKRLRPLLTLAAARMCGYN 90 Query: 61 GDN----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + HV +A +EFIHTATLLHDDVVDDS LRRG +A ++GN+ SVLVGDFL ++ Sbjct: 91 NQDGRMRHVEIAACVEFIHTATLLHDDVVDDSQLRRGLASANAIFGNKASVLVGDFLFAR 150 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 +F ++ S + LS + TLAEGE+ Q++ +L + E YL VI KTA LF+AA Sbjct: 151 SFQILTADASLGVMAILSAASATLAEGEVMQMTTQNDLSTSVEQYLQVIYGKTAALFAAA 210 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 E ++I R+AL+ YG NLG+AFQLVDD LDY + +GK +G+DFR GK TL Sbjct: 211 CESGAVIGEATPEQREALRMYGANLGMAFQLVDDALDYAADQATLGKEVGDDFREGKVTL 270 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 PV+ A+ G + ++ FW+ I + +L+ A + + A+ T A Y KA++ Sbjct: 271 PVLAAYDAGDEEDRIFWRRVIEECDQHPGDLEAALDRIAKTNAIGITLKCAEDYAAKARE 330 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L PD + K L+E + R Sbjct: 331 NLSMFPDDTLKNLLLETASYSASR 354 >gi|190151351|ref|YP_001969876.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251769|ref|ZP_07337940.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246933|ref|ZP_07528998.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249070|ref|ZP_07531077.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251268|ref|ZP_07533189.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255915|ref|ZP_07537716.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260368|ref|ZP_07542075.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307264706|ref|ZP_07546286.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189916482|gb|ACE62734.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649199|gb|EFL79384.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306852218|gb|EFM84458.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854358|gb|EFM86554.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856784|gb|EFM88919.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861183|gb|EFM93176.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865619|gb|EFM97500.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306870018|gb|EFN01782.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 331 Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 135/324 (41%), Positives = 204/324 (62%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AF----QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A ++G + + + +S I +G E + IM E+++L RA QKA D Sbjct: 247 AMHTAQEKGNQAQVDMIRSAIENGG-EREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVD 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LP+S +K++L+ + + R Sbjct: 306 ALAVLPESEYKQALISLAYLSVDR 329 >gi|46143904|ref|ZP_00133901.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209449|ref|YP_001054674.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae L20] gi|307258100|ref|ZP_07539852.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|126098241|gb|ABN75069.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306863463|gb|EFM95394.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 331 Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 135/324 (41%), Positives = 204/324 (62%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AF----QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A ++G + + + +S I +G E + IM E+++L RA QKA D Sbjct: 247 AMHTAQEKGNQAQVDIIRSAIENGG-EREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVD 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LP+S +K++L+ + + R Sbjct: 306 ALAVLPESEYKQALISLAYLSVDR 329 >gi|193065379|ref|ZP_03046450.1| octaprenyl-diphosphate synthase [Escherichia coli E22] gi|260846000|ref|YP_003223778.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str. 12009] gi|192927020|gb|EDV81643.1| octaprenyl-diphosphate synthase [Escherichia coli E22] gi|257761147|dbj|BAI32644.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str. 12009] gi|323162879|gb|EFZ48714.1| polyprenyl synthetase family protein [Escherichia coli E128010] Length = 323 Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 135/322 (41%), Positives = 202/322 (62%), Gaps = 5/322 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTI--NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 A GT + ++ I +G+ +E +++A M +L T RA KA +L Sbjct: 243 AMHHGTPEQAQMIRTAIEQGNGRHLLEPVQEA---MNACGSLEWTRQRAEEEADKAIAAL 299 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 + LPD+ W+++L+ + +QR Sbjct: 300 QVLPDTPWREALIGLAHIAVQR 321 >gi|170683435|ref|YP_001745459.1| octaprenyl diphosphate synthase [Escherichia coli SMS-3-5] gi|170521153|gb|ACB19331.1| octaprenyl-diphosphate synthase [Escherichia coli SMS-3-5] Length = 323 Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKNIG+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNIGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|331664800|ref|ZP_08365705.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA143] gi|331058048|gb|EGI30030.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA143] Length = 323 Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD++W+++L+ + +QR Sbjct: 302 LPDTTWREALIGLAHIAVQR 321 >gi|26249771|ref|NP_755811.1| octaprenyl diphosphate synthase [Escherichia coli CFT073] gi|26110199|gb|AAN82385.1|AE016767_145 Octaprenyl-diphosphate synthase [Escherichia coli CFT073] Length = 323 Score = 261 bits (667), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALVSLAHIAVQR 321 >gi|215488503|ref|YP_002330934.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str. E2348/69] gi|215266575|emb|CAS11014.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str. E2348/69] Length = 323 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAIGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|218550470|ref|YP_002384261.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469] gi|218358011|emb|CAQ90657.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469] gi|324115209|gb|EGC09173.1| polyprenyl synthetase [Escherichia fergusonii B253] gi|325498768|gb|EGC96627.1| octaprenyl diphosphate synthase [Escherichia fergusonii ECD227] Length = 323 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 198/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPNITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG Q L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEQGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMRHGTPEQAQMIRNAIEHGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIKALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|16762067|ref|NP_457684.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766600|ref|NP_462215.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143556|ref|NP_806898.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415234|ref|YP_152309.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364164|ref|YP_002143801.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205354206|ref|YP_002228007.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858553|ref|YP_002245204.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213053033|ref|ZP_03345911.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426652|ref|ZP_03359402.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213646987|ref|ZP_03377040.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238910099|ref|ZP_04653936.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825815|ref|ZP_06544983.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25314317|pir||AH0903 octaprenyl-diphosphate synthase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421862|gb|AAL22174.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504370|emb|CAD07822.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139191|gb|AAO70758.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129491|gb|AAV78997.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095641|emb|CAR61209.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205273987|emb|CAR38993.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710356|emb|CAR34714.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261248470|emb|CBG26307.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301159854|emb|CBW19373.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|322684901|gb|EFY80899.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323211311|gb|EFZ96155.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323224032|gb|EGA08325.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230319|gb|EGA14438.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323246927|gb|EGA30893.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254140|gb|EGA37960.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|332990163|gb|AEF09146.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 323 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|323966367|gb|EGB61801.1| polyprenyl synthetase [Escherichia coli M863] gi|327251278|gb|EGE62967.1| polyprenyl synthetase family protein [Escherichia coli STEC_7v] Length = 323 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCSPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|254038351|ref|ZP_04872409.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia sp. 1_1_43] gi|226839975|gb|EEH71996.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia sp. 1_1_43] Length = 340 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 20 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 79 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 80 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 139 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 140 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 199 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 200 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 259 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 260 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 318 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 319 LPDTPWREALIGLAHIAVQR 338 >gi|161616314|ref|YP_001590279.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194443184|ref|YP_002042563.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449256|ref|YP_002047334.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472845|ref|ZP_03078829.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736065|ref|YP_002116255.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195873559|ref|ZP_02697387.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197250149|ref|YP_002148230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264749|ref|ZP_03164823.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197301014|ref|ZP_02663064.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|198241919|ref|YP_002217276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386848|ref|ZP_03213460.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204931208|ref|ZP_03222002.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205357197|ref|ZP_02345799.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205358083|ref|ZP_02575589.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205358511|ref|ZP_02656973.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205359199|ref|ZP_02668072.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205359738|ref|ZP_02831626.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205360595|ref|ZP_02684656.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224585102|ref|YP_002638901.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|161365678|gb|ABX69446.1| hypothetical protein SPAB_04122 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401847|gb|ACF62069.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407560|gb|ACF67779.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459209|gb|EDX48048.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711567|gb|ACF90788.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633125|gb|EDX51539.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197213852|gb|ACH51249.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243004|gb|EDY25624.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289078|gb|EDY28447.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936435|gb|ACH73768.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603946|gb|EDZ02491.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204319975|gb|EDZ05181.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323255|gb|EDZ11094.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327615|gb|EDZ14379.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333924|gb|EDZ20688.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337771|gb|EDZ24535.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343490|gb|EDZ30254.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348475|gb|EDZ35106.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224469630|gb|ACN47460.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|312914332|dbj|BAJ38306.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087750|emb|CBY97514.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225271|gb|EFX50330.1| Octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615309|gb|EFY12230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618332|gb|EFY15223.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622863|gb|EFY19707.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626815|gb|EFY23612.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631384|gb|EFY28144.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635349|gb|EFY32063.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643348|gb|EFY39912.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647080|gb|EFY43581.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648883|gb|EFY45328.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655075|gb|EFY51386.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657678|gb|EFY53946.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664174|gb|EFY60372.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667457|gb|EFY63619.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674705|gb|EFY70797.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675662|gb|EFY71735.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682298|gb|EFY78321.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|323131665|gb|ADX19095.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195894|gb|EFZ81065.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199011|gb|EFZ84108.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204289|gb|EFZ89298.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207636|gb|EFZ92583.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323214747|gb|EFZ99496.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221227|gb|EGA05653.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323233295|gb|EGA17389.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239332|gb|EGA23382.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242417|gb|EGA26443.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323255257|gb|EGA39034.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262720|gb|EGA46276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264030|gb|EGA47538.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269416|gb|EGA52871.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625055|gb|EGE31400.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629328|gb|EGE35671.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 370 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 50 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 109 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 110 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 169 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 170 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 229 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 230 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 289 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 290 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 348 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 349 LPDTPWREALIGLAHIAVQR 368 >gi|322513608|ref|ZP_08066706.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976] gi|322120568|gb|EFX92468.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976] Length = 331 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 136/324 (41%), Positives = 201/324 (62%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 7 LEKIQALAKQDMQAVDAEILAQLNSEVVLINQLGHYIIAGGGKRIRPLIAVLAANALGYR 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 67 GDKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTSVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AFQ----RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A +G + + + +S I +G E + IM E+++L RA QKA D Sbjct: 247 AMHAAQAKGNQAQVDMIRSAIENGG-EREQIPAVLEIMAEHQSLDYAMARAKQEAQKAVD 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LP+S +K++L+ + R Sbjct: 306 ALAVLPESEYKQALISLAYLSADR 329 >gi|187476774|ref|YP_784798.1| octaprenyl-diphosphate synthase [Bordetella avium 197N] gi|115421360|emb|CAJ47865.1| octaprenyl-diphosphate synthase [Bordetella avium 197N] Length = 321 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/310 (43%), Positives = 195/310 (62%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ V+ +I +R+ S+V +I + Y+I +GGKR+RP + L A L Y G +H LLA Sbjct: 13 DMKAVDAVIRERLNSEVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYEGTHHQLLAAV 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M++E S + Sbjct: 73 VEFIHTATLLHDDVVDESDLRRGRETANAVFGNAASVLVGDYLYSRSFEMMVEANSMRIM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QL + +V++E YL V++ KTA LF AA +V +++AG Sbjct: 133 QILSEATTVIAEGEVLQLLNVHDPEVSQERYLQVVRYKTAKLFEAAAQVGAVLAGATPEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A +YG ++G AFQL+DDVLDY G+ +GKN+G+D R GKPTLP+I + G+ ++ Sbjct: 193 EAAAAAYGRHIGTAFQLIDDVLDYSGDALALGKNVGDDLREGKPTLPLIRVMEVGSPEQQ 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G+ + A +R+ AL A QKA+D+L C P S ++KSL Sbjct: 253 ALIRQAIETGQADFAAVAAA---IRDTDALAHARRAAEVEAQKARDALSCYPASIFQKSL 309 Query: 311 MEVVDFCLQR 320 +E F ++R Sbjct: 310 LEFCAFAVER 319 >gi|197104247|ref|YP_002129624.1| polyprenyl synthetase family protein [Phenylobacterium zucineum HLK1] gi|196477667|gb|ACG77195.1| polyprenyl synthetase family protein [Phenylobacterium zucineum HLK1] Length = 335 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 142/314 (45%), Positives = 205/314 (65%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM V+ LI + + S V +IP + +LI KRLRP+LT+A A + R D+ + Sbjct: 20 LAGPDMAAVDALIREHMDSPVPVIPALADHLIAGSAKRLRPLLTIAAARLAGARDDSCLK 79 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRG+VAA L+WG +SVLVGDFL ++AF +++ S Sbjct: 80 LAAAVEFIHTATLLHDDVVDSSQLRRGRVAAHLIWGAPSSVLVGDFLFARAFELMVGAGS 139 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ALE L+ + ++EGE+ QL+ S +LD+T+E Y+ +I +KTA LF+AA E ++ AG Sbjct: 140 MAALEILARASRVISEGEVLQLTRSHDLDLTQEVYIEIIGAKTAELFAAAAEAGAVAAGA 199 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +AL+ +G +LG+AFQLVDD LDY G+ +GKN G+DFR GK TLP++ A R Sbjct: 200 SPERCRALRRFGQDLGLAFQLVDDALDYSGDAKTLGKNAGDDFREGKVTLPLLYAMARTG 259 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E++FW+ T++ + + + +A +M + RAL DT A Y AK +L P +SW Sbjct: 260 AAERDFWQRTVDRREQTEADFDRARELMGQTRALDDTLALAARYADSAKAALADFPSNSW 319 Query: 307 KKSLMEVVDFCLQR 320 + +L ++ DF + R Sbjct: 320 RPALEDLADFSVAR 333 >gi|187730997|ref|YP_001881898.1| octaprenyl diphosphate synthase [Shigella boydii CDC 3083-94] gi|187427989|gb|ACD07263.1| octaprenyl-diphosphate synthase [Shigella boydii CDC 3083-94] Length = 323 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|323495811|ref|ZP_08100879.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326] gi|323319027|gb|EGA71970.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326] Length = 323 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 135/319 (42%), Positives = 198/319 (62%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKR+RPML + +A L Y+G Sbjct: 4 KAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRIRPMLAVLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V +AL++YG LG AFQL+DDV+DY + ++MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPEDVERALQNYGKYLGTAFQLIDDVMDYTSDGDDMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G++++ + + I ++ LK+ M E +L T +AY KA L L Sbjct: 244 MQNGSEQQASMIREAIEKAN-GMDKLKEILAAMDETGSLEYTRQQAYKEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 +S +K++L+ + + R Sbjct: 303 EESEYKQALITLAHMSVHR 321 >gi|16131077|ref|NP_417654.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. MG1655] gi|24114476|ref|NP_708986.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301] gi|30064525|ref|NP_838696.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T] gi|74313724|ref|YP_312143.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046] gi|82545575|ref|YP_409522.1| octaprenyl diphosphate synthase [Shigella boydii Sb227] gi|89109950|ref|AP_003730.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. W3110] gi|110807053|ref|YP_690573.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401] gi|157155105|ref|YP_001464663.1| octaprenyl diphosphate synthase [Escherichia coli E24377A] gi|170018563|ref|YP_001723517.1| octaprenyl diphosphate synthase [Escherichia coli ATCC 8739] gi|170082722|ref|YP_001732042.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. DH10B] gi|170765991|ref|ZP_02900802.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627] gi|188492215|ref|ZP_02999485.1| polyprenyl synthetase [Escherichia coli 53638] gi|194434492|ref|ZP_03066752.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012] gi|194439175|ref|ZP_03071256.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1] gi|209920662|ref|YP_002294746.1| octaprenyl diphosphate synthase [Escherichia coli SE11] gi|218555757|ref|YP_002388670.1| octaprenyl diphosphate synthase [Escherichia coli IAI1] gi|218696892|ref|YP_002404559.1| octaprenyl diphosphate synthase [Escherichia coli 55989] gi|218701956|ref|YP_002409585.1| octaprenyl diphosphate synthase [Escherichia coli IAI39] gi|218706807|ref|YP_002414326.1| octaprenyl diphosphate synthase [Escherichia coli UMN026] gi|238902289|ref|YP_002928085.1| octaprenyl diphosphate synthase [Escherichia coli BW2952] gi|253771979|ref|YP_003034810.1| octaprenyl diphosphate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163129|ref|YP_003046237.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606] gi|256018894|ref|ZP_05432759.1| octaprenyl diphosphate synthase [Shigella sp. D9] gi|256024238|ref|ZP_05438103.1| octaprenyl diphosphate synthase [Escherichia sp. 4_1_40B] gi|260857314|ref|YP_003231205.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str. 11368] gi|260869938|ref|YP_003236340.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str. 11128] gi|291284561|ref|YP_003501379.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str. CB9615] gi|293406796|ref|ZP_06650722.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412] gi|298382537|ref|ZP_06992134.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302] gi|300817559|ref|ZP_07097775.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300823848|ref|ZP_07103972.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300897953|ref|ZP_07116330.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300904377|ref|ZP_07122226.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300918947|ref|ZP_07135503.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300926070|ref|ZP_07141891.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|300929881|ref|ZP_07145324.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|300938101|ref|ZP_07152876.1| polyprenyl synthetase [Escherichia coli MS 21-1] gi|300948840|ref|ZP_07162906.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300955774|ref|ZP_07168117.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|301022044|ref|ZP_07185986.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|301025932|ref|ZP_07189417.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|301301753|ref|ZP_07207887.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|301326382|ref|ZP_07219744.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|307139873|ref|ZP_07499229.1| octaprenyl diphosphate synthase [Escherichia coli H736] gi|307313108|ref|ZP_07592734.1| Trans-hexaprenyltranstransferase [Escherichia coli W] gi|309793766|ref|ZP_07688192.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|312968475|ref|ZP_07782684.1| polyprenyl synthetase family protein [Escherichia coli 2362-75] gi|312972539|ref|ZP_07786713.1| polyprenyl synthetase family protein [Escherichia coli 1827-70] gi|331643885|ref|ZP_08345016.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H736] gi|331648987|ref|ZP_08350075.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M605] gi|331654791|ref|ZP_08355791.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M718] gi|331670014|ref|ZP_08370859.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA271] gi|331679266|ref|ZP_08379938.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H591] gi|332279982|ref|ZP_08392395.1| octaprenyl diphosphate synthase [Shigella sp. D9] gi|83286883|sp|P0AD57|ISPB_ECOLI RecName: Full=Octaprenyl-diphosphate synthase; AltName: Full=All-trans-octaprenyl-diphosphate synthase; AltName: Full=Octaprenyl pyrophosphate synthase; Short=OPP synthase gi|83286884|sp|P0AD58|ISPB_SHIFL RecName: Full=Octaprenyl-diphosphate synthase; AltName: Full=All-trans-octaprenyl-diphosphate synthase; AltName: Full=Octaprenyl pyrophosphate synthase; Short=OPP synthase gi|606125|gb|AAA57988.1| ORF_o323 [Escherichia coli str. K-12 substr. MG1655] gi|1789578|gb|AAC76219.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. MG1655] gi|24053659|gb|AAN44693.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301] gi|30042784|gb|AAP18507.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T] gi|73857201|gb|AAZ89908.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046] gi|81246986|gb|ABB67694.1| octaprenyl diphosphate synthase [Shigella boydii Sb227] gi|85675981|dbj|BAE77231.1| octaprenyl diphosphate synthase [Escherichia coli str. K12 substr. W3110] gi|110616601|gb|ABF05268.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401] gi|157077135|gb|ABV16843.1| octaprenyl-diphosphate synthase [Escherichia coli E24377A] gi|169753491|gb|ACA76190.1| Polyprenyl synthetase [Escherichia coli ATCC 8739] gi|169890557|gb|ACB04264.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. DH10B] gi|170125137|gb|EDS94068.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627] gi|188487414|gb|EDU62517.1| polyprenyl synthetase [Escherichia coli 53638] gi|194417271|gb|EDX33380.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012] gi|194421871|gb|EDX37877.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1] gi|209758174|gb|ACI77399.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209913921|dbj|BAG78995.1| octaprenyl-diphosphate synthase [Escherichia coli SE11] gi|218353624|emb|CAU99827.1| octaprenyl diphosphate synthase [Escherichia coli 55989] gi|218362525|emb|CAR00149.1| octaprenyl diphosphate synthase [Escherichia coli IAI1] gi|218371942|emb|CAR19798.1| octaprenyl diphosphate synthase [Escherichia coli IAI39] gi|218433904|emb|CAR14821.1| octaprenyl diphosphate synthase [Escherichia coli UMN026] gi|238861931|gb|ACR63929.1| octaprenyl diphosphate synthase [Escherichia coli BW2952] gi|242378730|emb|CAQ33520.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)] gi|253323023|gb|ACT27625.1| Trans-hexaprenyltranstransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975030|gb|ACT40701.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606] gi|253979186|gb|ACT44856.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)] gi|257755963|dbj|BAI27465.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str. 11368] gi|257766294|dbj|BAI37789.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str. 11128] gi|260447786|gb|ACX38208.1| Polyprenyl synthetase [Escherichia coli DH1] gi|281180229|dbj|BAI56559.1| octaprenyl-diphosphate synthase [Escherichia coli SE15] gi|281602570|gb|ADA75554.1| Octaprenyl-diphosphate synthase [Shigella flexneri 2002017] gi|284923209|emb|CBG36303.1| octaprenyl-diphosphate synthase [Escherichia coli 042] gi|290764434|gb|ADD58395.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str. CB9615] gi|291426802|gb|EFE99834.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412] gi|298277677|gb|EFI19193.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302] gi|299879904|gb|EFI88115.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|300317358|gb|EFJ67142.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|300358334|gb|EFJ74204.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300397718|gb|EFJ81256.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|300403684|gb|EFJ87222.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300413928|gb|EFJ97238.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300417874|gb|EFK01185.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|300451683|gb|EFK15303.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300456907|gb|EFK20400.1| polyprenyl synthetase [Escherichia coli MS 21-1] gi|300462199|gb|EFK25692.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|300523616|gb|EFK44685.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300529857|gb|EFK50919.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300842734|gb|EFK70494.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|300846914|gb|EFK74674.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|306907019|gb|EFN37527.1| Trans-hexaprenyltranstransferase [Escherichia coli W] gi|308122723|gb|EFO59985.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|309703613|emb|CBJ02953.1| octaprenyl-diphosphate synthase [Escherichia coli ETEC H10407] gi|310334916|gb|EFQ01121.1| polyprenyl synthetase family protein [Escherichia coli 1827-70] gi|312286693|gb|EFR14604.1| polyprenyl synthetase family protein [Escherichia coli 2362-75] gi|313648570|gb|EFS13012.1| polyprenyl synthetase family protein [Shigella flexneri 2a str. 2457T] gi|315062493|gb|ADT76820.1| octaprenyl diphosphate synthase [Escherichia coli W] gi|315137773|dbj|BAJ44932.1| conserved hypothetical protein [Escherichia coli DH1] gi|315257114|gb|EFU37082.1| polyprenyl synthetase [Escherichia coli MS 85-1] gi|315617270|gb|EFU97879.1| polyprenyl synthetase family protein [Escherichia coli 3431] gi|320174552|gb|EFW49688.1| Octaprenyl-diphosphate synthase [Shigella dysenteriae CDC 74-1112] gi|320181462|gb|EFW56380.1| Octaprenyl-diphosphate synthase [Shigella boydii ATCC 9905] gi|320186674|gb|EFW61398.1| Octaprenyl-diphosphate synthase [Shigella flexneri CDC 796-83] gi|320194672|gb|EFW69302.1| Octaprenyl-diphosphate synthase [Escherichia coli WV_060327] gi|320202101|gb|EFW76676.1| Octaprenyl-diphosphate synthase [Escherichia coli EC4100B] gi|320656246|gb|EFX24158.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661936|gb|EFX29344.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str. USDA 5905] gi|323154401|gb|EFZ40602.1| polyprenyl synthetase family protein [Escherichia coli EPECa14] gi|323165148|gb|EFZ50938.1| polyprenyl synthetase family protein [Shigella sonnei 53G] gi|323173553|gb|EFZ59182.1| polyprenyl synthetase family protein [Escherichia coli LT-68] gi|323178637|gb|EFZ64213.1| polyprenyl synthetase family protein [Escherichia coli 1180] gi|323183141|gb|EFZ68539.1| polyprenyl synthetase family protein [Escherichia coli 1357] gi|323189192|gb|EFZ74476.1| polyprenyl synthetase family protein [Escherichia coli RN587/1] gi|323376919|gb|ADX49187.1| Polyprenyl synthetase [Escherichia coli KO11] gi|323936119|gb|EGB32413.1| polyprenyl synthetase [Escherichia coli E1520] gi|323941713|gb|EGB37892.1| polyprenyl synthetase [Escherichia coli E482] gi|323946959|gb|EGB42975.1| polyprenyl synthetase [Escherichia coli H120] gi|323970250|gb|EGB65521.1| polyprenyl synthetase [Escherichia coli TA007] gi|323979096|gb|EGB74174.1| polyprenyl synthetase [Escherichia coli TW10509] gi|324018330|gb|EGB87549.1| polyprenyl synthetase [Escherichia coli MS 117-3] gi|324119552|gb|EGC13434.1| polyprenyl synthetase [Escherichia coli E1167] gi|330909241|gb|EGH37755.1| octaprenyl-diphosphate synthase [Escherichia coli AA86] gi|331037356|gb|EGI09580.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H736] gi|331042734|gb|EGI14876.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M605] gi|331048173|gb|EGI20250.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M718] gi|331062927|gb|EGI34841.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA271] gi|331073331|gb|EGI44654.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H591] gi|332086238|gb|EGI91396.1| polyprenyl synthetase family protein [Shigella boydii 5216-82] gi|332086522|gb|EGI91669.1| polyprenyl synthetase family protein [Shigella dysenteriae 155-74] gi|332090693|gb|EGI95787.1| polyprenyl synthetase family protein [Shigella boydii 3594-74] gi|332102334|gb|EGJ05680.1| octaprenyl diphosphate synthase [Shigella sp. D9] gi|332345144|gb|AEE58478.1| polyprenyl synthetase [Escherichia coli UMNK88] gi|332752346|gb|EGJ82736.1| polyprenyl synthetase family protein [Shigella flexneri 4343-70] gi|332752872|gb|EGJ83257.1| polyprenyl synthetase family protein [Shigella flexneri K-671] gi|332754473|gb|EGJ84839.1| polyprenyl synthetase family protein [Shigella flexneri 2747-71] gi|332765183|gb|EGJ95410.1| octaprenyl-diphosphate synthase [Shigella flexneri 2930-71] gi|332998829|gb|EGK18425.1| polyprenyl synthetase family protein [Shigella flexneri VA-6] gi|332999266|gb|EGK18852.1| polyprenyl synthetase family protein [Shigella flexneri K-272] gi|333000017|gb|EGK19600.1| polyprenyl synthetase family protein [Shigella flexneri K-218] gi|333014533|gb|EGK33880.1| polyprenyl synthetase family protein [Shigella flexneri K-304] gi|333014990|gb|EGK34334.1| polyprenyl synthetase family protein [Shigella flexneri K-227] Length = 323 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|157162671|ref|YP_001459989.1| octaprenyl diphosphate synthase [Escherichia coli HS] gi|157068351|gb|ABV07606.1| octaprenyl-diphosphate synthase [Escherichia coli HS] Length = 323 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVISEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|237706062|ref|ZP_04536543.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia sp. 3_2_53FAA] gi|226899102|gb|EEH85361.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia sp. 3_2_53FAA] Length = 340 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 20 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 79 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 80 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 139 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 140 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 199 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 200 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 259 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 260 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 318 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 319 LPDTPWREALVGLAHIAVQR 338 >gi|91212610|ref|YP_542596.1| octaprenyl diphosphate synthase [Escherichia coli UTI89] gi|110643427|ref|YP_671157.1| octaprenyl diphosphate synthase [Escherichia coli 536] gi|117625480|ref|YP_858803.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1] gi|191174477|ref|ZP_03035977.1| octaprenyl-diphosphate synthase [Escherichia coli F11] gi|218560257|ref|YP_002393170.1| octaprenyl diphosphate synthase [Escherichia coli S88] gi|218691477|ref|YP_002399689.1| octaprenyl diphosphate synthase [Escherichia coli ED1a] gi|227887908|ref|ZP_04005713.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972] gi|300980004|ref|ZP_07174826.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|300990877|ref|ZP_07179365.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|301047968|ref|ZP_07195012.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|331659474|ref|ZP_08360416.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA206] gi|91074184|gb|ABE09065.1| octaprenyl diphosphate synthase [Escherichia coli UTI89] gi|110345019|gb|ABG71256.1| octaprenyl-diphosphate synthase [Escherichia coli 536] gi|115514604|gb|ABJ02679.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1] gi|190905232|gb|EDV64871.1| octaprenyl-diphosphate synthase [Escherichia coli F11] gi|218367026|emb|CAR04797.1| octaprenyl diphosphate synthase [Escherichia coli S88] gi|218429041|emb|CAR09987.2| octaprenyl diphosphate synthase [Escherichia coli ED1a] gi|227835304|gb|EEJ45770.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972] gi|294490790|gb|ADE89546.1| octaprenyl-diphosphate synthase [Escherichia coli IHE3034] gi|300300164|gb|EFJ56549.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|300307867|gb|EFJ62387.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|300407044|gb|EFJ90582.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|307555280|gb|ADN48055.1| octaprenyl-diphosphate synthase [Escherichia coli ABU 83972] gi|307625214|gb|ADN69518.1| octaprenyl diphosphate synthase [Escherichia coli UM146] gi|315288960|gb|EFU48358.1| polyprenyl synthetase [Escherichia coli MS 110-3] gi|315294881|gb|EFU54220.1| polyprenyl synthetase [Escherichia coli MS 153-1] gi|315297896|gb|EFU57166.1| polyprenyl synthetase [Escherichia coli MS 16-3] gi|323951294|gb|EGB47169.1| polyprenyl synthetase [Escherichia coli H252] gi|323957666|gb|EGB53380.1| polyprenyl synthetase [Escherichia coli H263] gi|324008745|gb|EGB77964.1| polyprenyl synthetase [Escherichia coli MS 57-2] gi|324012137|gb|EGB81356.1| polyprenyl synthetase [Escherichia coli MS 60-1] gi|331054056|gb|EGI26085.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA206] Length = 323 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALVGLAHIAVQR 321 >gi|254491038|ref|ZP_05104219.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010] gi|224463551|gb|EEF79819.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010] Length = 322 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 138/313 (44%), Positives = 198/313 (63%), Gaps = 8/313 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM V+ LI +R+ SDV +I + Y+I SGGKRLRP + + +A Y GD H+ LA Sbjct: 13 DMTAVDNLIQQRLQSDVALINQLGFYIINSGGKRLRPAIAILSAKACGYEGDKHINLATI 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTATLLHDDVVD+SA+RRGK A +WGN+ SVLVGDFL +++F M++E S + Sbjct: 73 IEFIHTATLLHDDVVDNSAMRRGKETANNLWGNEASVLVGDFLYTRSFEMMVEMDSMRLM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS +AEGE+ QL + D TE YL VI KTA LF AA ++ ++I+ + + Sbjct: 133 RILSSTTNIIAEGEVLQLLNCHDADTTEARYLEVIHHKTAKLFEAAGQLGAVISRSADDI 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 QA+ Y M+LG AFQLVDD+LDY +GKNIG+D GKPTLP+I A ++GT ++ Sbjct: 193 EQAMARYAMHLGSAFQLVDDLLDYSQSSETIGKNIGDDLAEGKPTLPLIHAMRQGTDQQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK---AKDSLRCLPDSSWK 307 + I G+ + + + I+ E A+ +Y A++ Q+ AK +L LP++ +K Sbjct: 253 AIIREAIEQGQ--RDRIDEIITIINETGAI---DYTAHAAAQEVAHAKQALATLPETDYK 307 Query: 308 KSLMEVVDFCLQR 320 ++L+ + DF + R Sbjct: 308 QALLSLADFSISR 320 >gi|82778501|ref|YP_404850.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197] gi|309785515|ref|ZP_07680146.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617] gi|81242649|gb|ABB63359.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197] gi|308926635|gb|EFP72111.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617] Length = 323 Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNIIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|62181813|ref|YP_218230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62129446|gb|AAX67149.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|267995503|gb|ACY90388.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|322716302|gb|EFZ07873.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 381 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 61 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 120 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 121 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 180 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 181 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 240 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 241 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 300 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 301 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 359 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 360 LPDTPWREALIGLAHIAVQR 379 >gi|33591927|ref|NP_879571.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I] gi|33571571|emb|CAE41057.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I] gi|332381344|gb|AEE66191.1| octaprenyl-diphosphate synthase [Bordetella pertussis CS] Length = 321 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 133/310 (42%), Positives = 193/310 (62%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ V+ +I R+ SDV +I + Y+I +GGKR+RP + L A L Y+G +H LLA Sbjct: 13 DMKAVDTVIRDRLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQGTHHQLLAAV 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M++E S + Sbjct: 73 VEFIHTATLLHDDVVDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEMMVEADSMRIM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V +++AG Sbjct: 133 QILSQATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGASPEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A +YG ++G AFQLVDDVLDY G+ + +GKN+G+D R GKPTLP+I + GT ++ Sbjct: 193 ETAAAAYGRHVGTAFQLVDDVLDYSGDAHALGKNVGDDLREGKPTLPLIRVMETGTPEQR 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G+ + +A ++ AL A + + A+ +L P S ++KSL Sbjct: 253 ELIREAIKTGQADFAAVAQA---IQATDALAHARQAAENEAELARQALSAFPVSLYQKSL 309 Query: 311 MEVVDFCLQR 320 +E F + R Sbjct: 310 LEFCAFAVNR 319 >gi|331004838|ref|ZP_08328256.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989] gi|330421369|gb|EGG95617.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989] Length = 321 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 139/313 (44%), Positives = 204/313 (65%), Gaps = 2/313 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D E VN LIL +I SDV ++ D+ +YLI +GGKRLRP+L L + L+Y+GD H LA Sbjct: 11 RDFEAVNQLILGQIHSDVGLVEDIGQYLIEAGGKRLRPLLVLLVSNALQYQGDKHHDLAA 70 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEFIH+ATLLHDDVVD S LRRG++ A WGN SVLVGDFL S+AF M++ Sbjct: 71 IIEFIHSATLLHDDVVDMSDLRRGRLTANAKWGNAPSVLVGDFLYSRAFQMMVAVGDMSI 130 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ LS ++EGE++QL +K D++E+ Y VI KTA+LF AA E ++ ++G + + Sbjct: 131 MKILSDTTNLISEGEVQQLINAKKPDISEKGYFEVIHKKTAILFEAACETAATLSGAEET 190 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +R+ L +YG ++GIAFQL+DD LDY G E+GKN+G+D GKPTLP+I A ++ + Sbjct: 191 LRRQLTAYGYHVGIAFQLIDDALDYTGNTEELGKNVGDDLAEGKPTLPLIYAMSNSSEEQ 250 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 +I +G S L + I+R++ AL T A + A +L LPDS++K++ Sbjct: 251 SAMIADSIRNGDKS--QLSQIINIIRDSGALDYTLNLAKEHAMSAIKTLDALPDSTYKQA 308 Query: 310 LMEVVDFCLQRLN 322 ++++ +F + R N Sbjct: 309 MIDLAEFSISRSN 321 >gi|240950200|ref|ZP_04754487.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305] gi|240295287|gb|EER46073.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305] Length = 327 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 131/320 (40%), Positives = 201/320 (62%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ VN IL ++ S+V +I + Y+I GGKR+RP++T+ A L Y+ Sbjct: 7 LEQIQALAAEDMQAVNAEILAQLNSEVPLINQLGFYIISGGGKRIRPLITVLAARALGYQ 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGD++ +++F M Sbjct: 67 GAKQITTAAFIEFVHTATLLHDDVVDESDMRRGRETANAAFGNAASVLVGDYIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S E L+ +S LAEGE++QL + + TEE+Y+ VI +KTA LF AA + Sbjct: 127 MTSVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEENYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + ALK+YG LG AFQLVDD+LDY +GKN+G+DF GKPT+P++ Sbjct: 187 AIVANASKEIEIALKNYGCYLGTAFQLVDDILDYSANAQALGKNVGDDFVEGKPTMPLLH 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G + + N + I G EN+ + IM E+++L T +A + QKA D+L Sbjct: 247 AMRHGNEAQANMIRQAIEQGG-DRENIDEVLAIMAEHKSLDYTMSKAKAEAQKAVDALAI 305 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 306 LPESEYKQALISLAYLSVDR 325 >gi|213622139|ref|ZP_03374922.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 317 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 135/315 (42%), Positives = 194/315 (61%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+G+ HV Sbjct: 2 ELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHV 61 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+ Sbjct: 62 TIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLG 121 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S ++AG Sbjct: 122 SLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAG 181 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ A + G Sbjct: 182 CTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLHAMRHG 241 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + ++ I G L+ M +L T RA KA +L+ LPD+ Sbjct: 242 TPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQILPDTP 300 Query: 306 WKKSLMEVVDFCLQR 320 W+++L+ + +QR Sbjct: 301 WREALIGLAHIAVQR 315 >gi|92112606|ref|YP_572534.1| trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM 3043] gi|91795696|gb|ABE57835.1| Trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM 3043] Length = 337 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 134/302 (44%), Positives = 186/302 (61%), Gaps = 2/302 (0%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 IL ++ S V ++ + +Y+I SGGKRLRP+L L A L Y GD HV LA IEF+HT+T Sbjct: 36 ILAQLASRVPLVETIGRYIIESGGKRLRPLLVLLAARSLNYPGDRHVTLATLIEFMHTST 95 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 LLHDDVVD+S LRRGK A WGN SVLVGDFL S++F M++E S +E LS C Sbjct: 96 LLHDDVVDESHLRRGKATANDAWGNAPSVLVGDFLYSRSFQMMVEVGSMRVMEILSGATC 155 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 +AEGE+ QL+ N D+ E Y I+ KTA+LF AA +++A + +ALK YG Sbjct: 156 VIAEGEVLQLTNIGNPDIDEAAYFDTIQGKTAMLFEAASHSGAVLAEATPAQEEALKLYG 215 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 LG+AFQLVDD+LDY+G+ + MGKN+G+D GKPTLP+I A G + + + I Sbjct: 216 RYLGLAFQLVDDLLDYQGDADAMGKNVGDDLAEGKPTLPLIHAMANGNAEQVSVVRQAIR 275 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 G + ++L + I+ + AL T RA +A L LP+S ++ S+ + + Sbjct: 276 QGGL--DHLDEVLAIVHDTGALDYTRRRAEEMADRALAQLELLPESRYRDSMAALAHLAV 333 Query: 319 QR 320 +R Sbjct: 334 ER 335 >gi|306816471|ref|ZP_07450603.1| octaprenyl diphosphate synthase [Escherichia coli NC101] gi|222034904|emb|CAP77647.1| Octaprenyl-diphosphate synthase [Escherichia coli LF82] gi|305850036|gb|EFM50495.1| octaprenyl diphosphate synthase [Escherichia coli NC101] gi|312947744|gb|ADR28571.1| octaprenyl diphosphate synthase [Escherichia coli O83:H1 str. NRG 857C] Length = 323 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNVHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALVGLAHIAVQR 321 >gi|33599305|ref|NP_886865.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50] gi|33575351|emb|CAE30814.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50] Length = 321 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 133/310 (42%), Positives = 193/310 (62%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ V+ +I R+ SDV +I + Y+I +GGKR+RP + L A L Y+G +H LLA Sbjct: 13 DMKAVDAVIRDRLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQGTHHQLLAAV 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M++E S + Sbjct: 73 VEFIHTATLLHDDVVDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEMMVEADSMRIM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V +++AG Sbjct: 133 QILSQATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGASPEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A +YG ++G AFQLVDDVLDY G+ + +GKN+G+D R GKPTLP+I + GT ++ Sbjct: 193 ETAAAAYGRHVGAAFQLVDDVLDYSGDAHALGKNVGDDLREGKPTLPLIRVMETGTPEQR 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G+ + +A ++ AL A + + A+ +L P S ++KSL Sbjct: 253 ELIREAIKTGQADFAAVAQA---IQATDALAHARQAAENEAELARQALSAFPVSLYQKSL 309 Query: 311 MEVVDFCLQR 320 +E F + R Sbjct: 310 LEFCAFAVNR 319 >gi|303250376|ref|ZP_07336575.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253685|ref|ZP_07535552.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650846|gb|EFL81003.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306858921|gb|EFM90967.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 331 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 134/324 (41%), Positives = 203/324 (62%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAENFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AF----QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A ++G + + + +S I +G E + IM E+++L RA QKA D Sbjct: 247 AMHTAQEKGNQAQVDMIRSAIENGG-EREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVD 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LP+S + ++L+ + + R Sbjct: 306 ALAVLPESEYTQALISLAYLSVDR 329 >gi|165977439|ref|YP_001653032.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877540|gb|ABY70588.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 331 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 134/324 (41%), Positives = 203/324 (62%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AF----QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A ++G + + + +S I +G E + IM E+++L RA QKA D Sbjct: 247 AMHTAQEKGNQAQVDIIRSAIENGG-EREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVD 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LP+S + ++L+ + + R Sbjct: 306 ALAVLPESEYTQALISLAYLSVDR 329 >gi|33595027|ref|NP_882670.1| octaprenyl-diphosphate synthase [Bordetella parapertussis 12822] gi|33565103|emb|CAE40054.1| octaprenyl-diphosphate synthase [Bordetella parapertussis] Length = 321 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 133/310 (42%), Positives = 192/310 (61%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ V+ +I R+ SDV +I + Y+I +GGKR+RP + L A L Y+G +H LLA Sbjct: 13 DMKAVDAVIRDRLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQGTHHQLLAAV 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M++E S + Sbjct: 73 VEFIHTATLLHDDVVDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEMMVEADSMRIM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V +++AG Sbjct: 133 QILSQATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGASPEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A +YG +G AFQLVDDVLDY G+ + +GKN+G+D R GKPTLP+I + GT ++ Sbjct: 193 ETAAAAYGRRVGTAFQLVDDVLDYSGDAHALGKNVGDDLREGKPTLPLIRVMETGTPEQR 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G+ + +A ++ AL A + + A+ +L P S ++KSL Sbjct: 253 ELIREAIKTGQADFAAVAQA---IQATDALAHARQAAENEAELARQALSAFPVSLYQKSL 309 Query: 311 MEVVDFCLQR 320 +E F + R Sbjct: 310 LEFCAFAVNR 319 >gi|257465194|ref|ZP_05629565.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202] gi|257450854|gb|EEV24897.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202] Length = 327 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 202/320 (63%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ VN IL ++ S+V +I + Y+I GGKR+RP++T+ A L Y+ Sbjct: 7 LEQIQALAAEDMQAVNAEILAQLNSEVPLINQLGFYIISGGGKRIRPLITVLAARALGYQ 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGD++ +++F M Sbjct: 67 GAKQITTAAFIEFVHTATLLHDDVVDESDMRRGRETANAAFGNAASVLVGDYIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S E L+ +S LAEGE++QL + + TEE+Y+ VI +KTA LF AA + Sbjct: 127 MTSVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEENYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + ALK+YG LG AFQLVDD+LDY +GKN+G+DF GKPT+P++ Sbjct: 187 AIVANASKEIEIALKNYGCYLGTAFQLVDDILDYSANAQALGKNVGDDFVEGKPTMPLLH 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G + + N + I G + EN+ + IM E+++L T +A + QKA D++ Sbjct: 247 AMRHGNEAQANMIRQAIEQGG-NRENIDEVLAIMAEHKSLDYTMEKAKAEAQKAVDAIAI 305 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 306 LPESEYKQALISLAYLSVDR 325 >gi|312883913|ref|ZP_07743630.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368371|gb|EFP95906.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC BAA-2122] Length = 323 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 132/317 (41%), Positives = 197/317 (62%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ LT DM KVN I ++ SDV +I + Y++ GGKR+RP+L + +A L Y+G Sbjct: 6 IQALTADDMAKVNETIHAQLNSDVTLINQLGFYIVSGGGKRVRPLLAIISAKALGYKGQG 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H L A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ E Sbjct: 66 HTLSAAFIEFIHTATLLHDDVVDESDMRRGKATANSAFGNAASVLVGDYIYTRSFQMMTE 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S + L+ +S +AEGE++QL + +V+EE Y+ VI SKTA LF A +V +++ Sbjct: 126 LGSMKILKLMSDAVNVIAEGEVQQLMNCNDPNVSEESYMQVIYSKTARLFEVATQVGAVL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + + ALK+YG LG AFQL+DDV+DY EMGKN+G+D GKPTLP+I A Q Sbjct: 186 SEAPSEIEIALKNYGRYLGTAFQLIDDVMDYTSTGKEMGKNVGDDLAEGKPTLPLIHAMQ 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + + K I + +++L++ IM++ +L +AY KA L C+P+ Sbjct: 246 TSSPEQSQLIKQAIENAN-GMDHLQEILDIMKQTGSLDYARQKAYQEADKAISELNCIPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 305 SDYKQALITLAHMSVNR 321 >gi|311277840|ref|YP_003940071.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] gi|308747035|gb|ADO46787.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] Length = 323 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 198/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+AG ++ + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GLLAGCSDAQEKGLQDYGRYLGTAFQLIDDLLDYSSDGETLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G+ + + I +G L+ M + +L T RA KA +L Sbjct: 243 AMRHGSAAQSAMIRQAIEEGN-GRHLLEPVLEAMADCGSLEWTRQRAEEEADKAIAALSV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALISLAHIAVQR 321 >gi|269137746|ref|YP_003294446.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202] gi|267983406|gb|ACY83235.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202] gi|304557803|gb|ADM40467.1| Octaprenyl-diphosphate synthase [Edwardsiella tarda FL6-60] Length = 323 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 136/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQITELTAQDMADVNARILHQLNSDVALINQLGYYIISGGGKRIRPMIAVLAARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDRHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE++QL + D++EE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRILALMSEATNVIAEGEVQQLMNVNDPDISEENYMQVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + QAL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAGADTAQEQALQDYGRYLGTAFQLIDDLLDYDADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G+ + I G L+ M++ +L T RA KA +L Sbjct: 243 AMHHGSAERSAMIRQAIEQGN-GRHLLEPVLETMQQAGSLDYTRSRAEEEADKAIAALAP 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS K++L+ + + + R Sbjct: 302 LPDSPHKQALIGLANLAVNR 321 >gi|161506132|ref|YP_001573244.1| hypothetical protein SARI_04320 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867479|gb|ABX24102.1| hypothetical protein SARI_04320 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 498 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 178 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 237 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 238 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 297 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 298 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 357 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 358 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGKHLGKNVGDDLNEGKPTLPLLH 417 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L M +L T RA KA +L+ Sbjct: 418 AMRHGTPEQSTMIRTAIEQGN-GRHLLDPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 476 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 477 LPDTPWREALIGLAHIAVQR 496 >gi|153874225|ref|ZP_02002523.1| Polyprenyl synthetase [Beggiatoa sp. PS] gi|152069311|gb|EDN67477.1| Polyprenyl synthetase [Beggiatoa sp. PS] Length = 337 Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 142/323 (43%), Positives = 197/323 (60%), Gaps = 12/323 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM VN LI KR+ S+V ++ + Y++ SGGKRLRPML L +A Y+G +H+ LA Sbjct: 13 QDMRAVNVLIQKRLYSEVALVNQIGDYIVNSGGKRLRPMLLLLSARAFAYQGTHHIDLAA 72 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD S LRRG+ A +WGN+ SVLVGDFL S+AF M+++ + Sbjct: 73 IVEFIHTATLLHDDVVDASLLRRGQETANNIWGNEASVLVGDFLYSRAFQMMVDINNMRV 132 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ LS +AEGE+ QL D TE DYL VI +KTA LF AA ++ ++I+ + Sbjct: 133 MKILSEATNVMAEGEVLQLLNCYEPDTTEMDYLRVICAKTAKLFEAAAQLGAVISEQPSE 192 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +A+ YGM+LGIAFQL+DD LDY + +GKNIG+D GKPTLP+I A + T + Sbjct: 193 YEKAMAMYGMHLGIAFQLIDDALDYNATMENLGKNIGDDLTEGKPTLPLIYALKHATPSQ 252 Query: 250 KNFWKSTIN-DG----------KISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 + + I+ DG K SV+ L KK +I+ A+ T A KA + Sbjct: 253 QKILREGISQDGQLHDAIKQNDKTSVDELIKKVIVIVESTGAIRYTMQVAQKEADKAIIA 312 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L LP S + ++L + DF + R Sbjct: 313 LTELPQSPYTEALRSLADFSVNR 335 >gi|193070326|ref|ZP_03051269.1| octaprenyl-diphosphate synthase [Escherichia coli E110019] gi|192956385|gb|EDV86845.1| octaprenyl-diphosphate synthase [Escherichia coli E110019] Length = 323 Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILVGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|301644900|ref|ZP_07244870.1| polyprenyl synthetase [Escherichia coli MS 146-1] gi|301076794|gb|EFK91600.1| polyprenyl synthetase [Escherichia coli MS 146-1] Length = 320 Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 195/319 (61%), Gaps = 1/319 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQ 319 LPD+ W+++L+ + +Q Sbjct: 302 LPDTPWREALIGLAHIAVQ 320 >gi|157374092|ref|YP_001472692.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3] gi|157316466|gb|ABV35564.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3] Length = 323 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 199/322 (61%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKR+RP+L++ A ++Y+ Sbjct: 3 LNAIRQLADNDMQNVNKLIYKQLESDVALINQLGFYIINGGGKRMRPLLSILAARAIDYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GEAHLKLAAIIEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + E LE L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++ Sbjct: 123 MTELGNMEVLEVLADATNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 183 GVLAQSPIEAQNALADYGKFLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT++E+ ++ I G +N+++ + AL T RA KA ++L Sbjct: 243 AMAHGTEKEQELIRTAIEKGD-GTQNIEEILNALHSCGALDYTFRRALEESDKAIEALSI 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 +P+S +K++L+ + ++R N Sbjct: 302 IPESDYKQALISLAKIAVERSN 323 >gi|330831008|ref|YP_004393960.1| trans-hexaprenyltranstransferase [Aeromonas veronii B565] gi|328806144|gb|AEB51343.1| Trans-hexaprenyltranstransferase [Aeromonas veronii B565] Length = 323 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 139/314 (44%), Positives = 194/314 (61%), Gaps = 1/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN LIL R+ SDV +I + Y++ +GGKR+RPMLT+ A L Y G++H+ Sbjct: 9 LCAADMTAVNELILARLQSDVSLINQLGFYIVSAGGKRMRPMLTVMAARALGYEGEDHLK 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IEFIHT+TLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M+ E + Sbjct: 69 LAAIIEFIHTSTLLHDDVVDESDLRRGRETANAMFGNAASVLVGDYLYSRSFQMMAELSN 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E LS T+AEGE+ QL + D TEE Y+ VI KTA LF AA +++++ Sbjct: 129 LRVMEILSDATNTIAEGEVLQLMNCNDPDTTEESYMTVIYCKTAKLFEAATRLAAVLTHQ 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 V QA+ YG LG AFQ++DDV+DY + EMGKN+G+D GKPTLP++ A + GT Sbjct: 189 PEPVEQAMTDYGKYLGTAFQIIDDVMDYCSQSEEMGKNVGDDLAEGKPTLPLLRAMEVGT 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ + I + + +E+L++ I+ AL + RA KA +L LPDS Sbjct: 249 PEERQLVRDAI-EHRNGMEHLEQILGILDRTGALEYSRMRAREEADKAIAALAILPDSPH 307 Query: 307 KKSLMEVVDFCLQR 320 K +L + +QR Sbjct: 308 KHALETLAHMAVQR 321 >gi|84394037|ref|ZP_00992774.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01] gi|84375323|gb|EAP92233.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01] Length = 323 Score = 258 bits (659), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 136/319 (42%), Positives = 195/319 (61%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L L +A L Y+G Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 EAHITSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S + LE +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TTLGSLKILELMSEAVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +++ + A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILSESSPEIETAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G+ + + + I +E L +M+E +L T +AY KA L L Sbjct: 244 MHNGSPEQTSMIREAIEKAN-GMERLDDIMAVMKETGSLEYTTNKAYEEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS +K++L + ++R Sbjct: 303 PDSEYKQALTTLAHLAVKR 321 >gi|114319994|ref|YP_741677.1| trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1] gi|114226388|gb|ABI56187.1| Trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1] Length = 322 Score = 258 bits (659), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 138/318 (43%), Positives = 200/318 (62%), Gaps = 4/318 (1%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + +L DM VN LI +R+ S+V +I + Y++ SGGKRLRP+L L A YRG++ Sbjct: 6 IRNLAADDMAAVNRLIQERLSSEVVLIDQMGHYIVNSGGKRLRPLLVLLAARAAGYRGEH 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA +EFIHTATLLHDDVVD+S LRRG+ A +WGN+ +VLVGDFL ++AF M++E Sbjct: 66 HIKLAAVVEFIHTATLLHDDVVDESTLRRGQDTANSIWGNEAAVLVGDFLYTRAFEMMVE 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 ++ ++ T+AEGE+ QL + DV+E Y VI KTA LF AA + I Sbjct: 126 VGLLPIMQVMARTTNTIAEGEVMQLLNCHDPDVSEARYRDVIYRKTASLFEAACCLGGTI 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG+ + L +YG++LG A+QLVDD LDY G+ E+GKNIG+D GKPT+P+I A Sbjct: 186 AGLPQAQTDHLAAYGLHLGTAYQLVDDALDYAGKAEEIGKNIGDDLAEGKPTMPLIYAMA 245 Query: 244 RGTKREKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 RG+ E+ + I++G IS + +++A + A+ T+ A ++A + L LP Sbjct: 246 RGSAEERQVIREAISEGGISRIAAVQQA---IENTGAIPYTQRLARDEAEEAVNRLAHLP 302 Query: 303 DSSWKKSLMEVVDFCLQR 320 DS WK++L + F + R Sbjct: 303 DSEWKQALEALARFSVAR 320 >gi|74316881|ref|YP_314621.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC 25259] gi|74056376|gb|AAZ96816.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC 25259] Length = 343 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 197/320 (61%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L+ DM V+ +I +R+ SDV +I V +Y+I SGGKRLRP L L +A YR Sbjct: 24 LESLQSFLADDMRAVDHVIRERLYSDVVLIRQVSEYIINSGGKRLRPALVLLSAGCFGYR 83 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M Sbjct: 84 GQAHHELAAVVEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDFLYSRAFQM 143 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + E + LS T+AEGE+ QL + D+ EE+YL VI+ KTA LF AA + Sbjct: 144 MVGVDNMEVMRILSDATNTIAEGEVLQLLNCHDPDIDEENYLRVIRYKTAKLFEAAGRLG 203 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I G + + AL YGM+LG AFQL+DDVLDY G+ + GKNIG+D GKPTLP++ Sbjct: 204 AVIGGGSEADKDALARYGMHLGTAFQLIDDVLDYSGDFLKTGKNIGDDLAEGKPTLPLLY 263 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G+ + + I G ++ + +++ AL T A Q A ++ Sbjct: 264 AMKHGSAAQAASIRHAIEHGGLT--EFQSVLAAIKDTNALQYTREVAQREVQTANAAISR 321 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS+ K +L+++ F ++R Sbjct: 322 LPDSNSKTALLQLAAFAVER 341 >gi|317493609|ref|ZP_07952030.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918552|gb|EFV39890.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 323 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ S+V +I + Y+I GGKR+RPM+ + +A L Y Sbjct: 3 LEQITELTAQDMADVNATILQQLNSEVSLINQLGYYIISGGGKRIRPMIAVLSARALNYT 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S LE +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLQSLRVLELMSEATNVIAEGEVLQLMNVNDPNITEENYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAGATHEQEIALQDYGRYLGTAFQLIDDLLDYDADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G+ + I +G L+ M E +L T RA KA +L Sbjct: 243 AMQNGSPERSAMIRKAIEEGN-GRHLLEPVLETMHEVGSLTYTRQRAEEEADKAISALDV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + + R Sbjct: 302 LPESPYKEALIGLANMAVDR 321 >gi|260775534|ref|ZP_05884431.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260608715|gb|EEX34880.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 323 Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 135/319 (42%), Positives = 192/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKR+RP+L + +A L Y+G Sbjct: 4 KAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRIRPLLAVLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 QAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNIIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + V AL++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPSEVETALQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q GT + + I +E L M + +L T +AY KA L L Sbjct: 244 MQHGTPEQTQMIREAIEKAN-GMEKLDSIMEAMEQTGSLEYTRQKAYQEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 +S +K++L+ + + R Sbjct: 303 SESPYKEALVTLAHMSVHR 321 >gi|88859033|ref|ZP_01133674.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas tunicata D2] gi|88819259|gb|EAR29073.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas tunicata D2] Length = 323 Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 138/322 (42%), Positives = 205/322 (63%), Gaps = 5/322 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ LT DM++VN LI K++ SDV ++ + Y++ SGGKR+RPML++ +A L Y Sbjct: 3 IKSIQALTDNDMQRVNQLIYKQLQSDVALVNQLGLYIVSSGGKRVRPMLSILSAKALGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA +EFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ ++AF + Sbjct: 63 GDAHITLAAIVEFIHTATLLHDDVVDESDLRRGNATANAEFGNAASVLVGDFIYTRAFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + ++ L+ +AEGE+ QL + D TE+ Y+ VI SKTA LF AA +++ Sbjct: 123 MVGLEEMRVMKILADATNVIAEGEVLQLMNCNDPDTTEQSYMQVIYSKTAKLFEAATQLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I + + LK YGM+LG AFQLVDDVLDY + E+GK++G+D GKPTLP+I Sbjct: 183 AVITRKDAATEEQLKLYGMHLGTAFQLVDDVLDYSADQAELGKSLGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTI--NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 A Q GTK + + I +G+ ++++ KA + + AL T +A Q+A L Sbjct: 243 AMQHGTKEQVALIRQVIEQGNGRAFLDDVLKA---LADTDALNFTLNKAKEESQRAIACL 299 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 LPDS +K++L+ + + R Sbjct: 300 ALLPDSEYKEALIGLARLAVDR 321 >gi|292490245|ref|YP_003525684.1| trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4] gi|291578840|gb|ADE13297.1| Trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4] Length = 322 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 137/315 (43%), Positives = 199/315 (63%), Gaps = 2/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL DM+ VN LI KR+ SDV +I + Y+I SGGKRLRP++ L +A +Y+G H+ Sbjct: 8 DLIADDMQAVNGLIQKRLHSDVVLINQLGHYIINSGGKRLRPVVVLLSARAFDYQGSCHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD S LRRG+ A +WG++ SVLVGDFL S+AF M+++ Sbjct: 68 DIATIIEFIHTATLLHDDVVDSSELRRGQKTANSIWGSEASVLVGDFLYSRAFEMMVDVN 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S +E L+ T+AEGE+ QL + D TEE YL VI+SKTA LF AA ++ ++++ Sbjct: 128 SMRVMEILARTTNTIAEGEVMQLLNCHDPDTTEERYLDVIRSKTAKLFEAATQLGAVLSC 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + +A+ +YGM+LG AFQL DDVLDY +++GKNIG+D GKPTLP+I A + G Sbjct: 188 RPAAEEEAMAAYGMHLGTAFQLTDDVLDYSASSDDLGKNIGDDLAEGKPTLPLIYAMRNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 ++ I G +NL + + + A+ T A +KA +++ +P S Sbjct: 248 IPSHAEVIRNAIEGG--GRDNLAEVIEAIESSGAIAYTAKTARREAEKAIQAIKKIPASP 305 Query: 306 WKKSLMEVVDFCLQR 320 ++++L+ + F + R Sbjct: 306 YQEALLNLAKFAVYR 320 >gi|126173210|ref|YP_001049359.1| polyprenyl synthetase [Shewanella baltica OS155] gi|152999569|ref|YP_001365250.1| polyprenyl synthetase [Shewanella baltica OS185] gi|160874188|ref|YP_001553504.1| polyprenyl synthetase [Shewanella baltica OS195] gi|304410433|ref|ZP_07392051.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|307304525|ref|ZP_07584275.1| Polyprenyl synthetase [Shewanella baltica BA175] gi|125996415|gb|ABN60490.1| Trans-hexaprenyltranstransferase [Shewanella baltica OS155] gi|151364187|gb|ABS07187.1| Polyprenyl synthetase [Shewanella baltica OS185] gi|160859710|gb|ABX48244.1| Polyprenyl synthetase [Shewanella baltica OS195] gi|304350917|gb|EFM15317.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|306911927|gb|EFN42351.1| Polyprenyl synthetase [Shewanella baltica BA175] gi|315266420|gb|ADT93273.1| Polyprenyl synthetase [Shewanella baltica OS678] Length = 331 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 138/310 (44%), Positives = 191/310 (61%), Gaps = 1/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y G+ H+ LA Sbjct: 21 DMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVSYEGEAHLKLAAI 80 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M+ E S + L Sbjct: 81 IEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELDSMKVL 140 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++ ++AG Sbjct: 141 RVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLAGVLAGATPEQ 200 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL +YG LG AFQL DD+LDY + +E+GKNIG+D GKPTLP+I A GT EK Sbjct: 201 ETALGNYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIYAIAHGTDEEK 260 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + I G + + K + AL T+ +A +KA ++L LPDS +K++L Sbjct: 261 HLIRQAIEQGD-GTQAIDKIVAALHHCGALNYTQQKAIEESEKAIEALSILPDSDYKQAL 319 Query: 311 MEVVDFCLQR 320 + + + R Sbjct: 320 VALAKISVDR 329 >gi|295097675|emb|CBK86765.1| Geranylgeranyl pyrophosphate synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 323 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGCSEAQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I G L+ M +L T RA KA +++ Sbjct: 243 AMRNGTPEQAKMIREAIEQGN-GRHLLEPVLETMAICGSLEWTRQRAEEEADKAIAAIQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDS W+ +L+ + +QR Sbjct: 302 IPDSPWRDALIGLAHIAVQR 321 >gi|300115547|ref|YP_003762122.1| trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113] gi|299541484|gb|ADJ29801.1| Trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113] Length = 322 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 135/315 (42%), Positives = 193/315 (61%), Gaps = 2/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL DM V+ LI +R+ SDV +I + Y+I SGGKRLRPM+ L +A +Y+G H+ Sbjct: 8 DLVADDMRSVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFDYQGSYHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD S LRRG+ A +WG++ SVLVGDFL S+AF M++ Sbjct: 68 DIAAIIEFIHTATLLHDDVVDSSELRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVGVD 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S +E L+ T+AEGE+ QL D TEE YL +I+SKTA LF AA ++ +++ Sbjct: 128 SMRVMEILARTTNTIAEGEVMQLLNCHEPDTTEECYLEIIRSKTAKLFEAATQLGAVLCH 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 ++ + + +YGM+LG AFQL DDVLDY ++GKNIG+D GKPTLP+I A +G Sbjct: 188 RSSAEEKLMATYGMHLGTAFQLTDDVLDYSAFSEDLGKNIGDDLAEGKPTLPLIYAMSKG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T ++ I G ENL + + + A+ T A +A +++ +P S Sbjct: 248 TAPHVKVIRNAIESG--GRENLAEVIEAIESSGAIAYTAEAARREADRAMQAVKSIPPSP 305 Query: 306 WKKSLMEVVDFCLQR 320 ++++L+ + F R Sbjct: 306 YQEALLNLAKFAAYR 320 >gi|238918407|ref|YP_002931921.1| hypothetical protein NT01EI_0448 [Edwardsiella ictaluri 93-146] gi|238867975|gb|ACR67686.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 323 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQITELTAQDMADVNAKILHQLNSDVALINQLGYYIISGGGKRIRPMIAILAARTLGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDHHLTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE++QL + D++EE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRILALMSEATNVIAEGEVQQLMNVNDPDISEENYMQVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + QAL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAGADPAQEQALQDYGRYLGTAFQLIDDLLDYDADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G+ + I G L+ M++ +L T RA KA +L Sbjct: 243 AMHHGSAERSAMIRQAIEQGN-GRHLLELVLETMQQAGSLDYTRSRAEEEADKAIAALTL 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS K++L+ + + + R Sbjct: 302 LPDSPHKQALIGLANLAVNR 321 >gi|148977829|ref|ZP_01814384.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3] gi|145962898|gb|EDK28169.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3] Length = 323 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 136/319 (42%), Positives = 193/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L L +A L Y+G Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 EAHITSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S LE +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TTLGSLRILELMSEAVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILTESSPEIETAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G+ + + + I +E L +M+E +L T +AY KA L L Sbjct: 244 MHNGSPEQASMIREAIEKAN-GMERLDDIMAVMKETGSLEYTTNKAYEEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS +K++L + ++R Sbjct: 303 PDSEYKQALTTLAHLAVKR 321 >gi|319778972|ref|YP_004129885.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9] gi|317108996|gb|ADU91742.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9] Length = 321 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 135/311 (43%), Positives = 194/311 (62%), Gaps = 3/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM V+ +I R+ S+V +I + +Y+I +GGKR+RP + L + L Y G H L+A Sbjct: 12 EDMSAVDKVIRSRLNSEVVLIRTIGEYIISAGGKRIRPAMLLMMSKALGYEGSLHHLMAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEFIHT+TLLHDDVVD+S +RRG A V+GN SVLVGD+L S++F M++E S Sbjct: 72 VIEFIHTSTLLHDDVVDESDMRRGSATANAVFGNAASVLVGDYLYSRSFEMMVEADSMRI 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ +S +AEGE+ QL + +V + Y+ VIKSKTA LF AA V++++AG ++ Sbjct: 132 MQIMSEATTVIAEGEVLQLLNVHDPNVDFDRYMDVIKSKTAKLFEAATRVAAVLAGADDA 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V Q YG ++G AFQ++DDVLDY G ++GKN+G+D R GKPTLP+I GT + Sbjct: 192 VEQKAALYGTHVGTAFQVIDDVLDYSGSAEDLGKNVGDDLREGKPTLPLIRVMSVGTPEQ 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 K + I +G E + +A +R AL T A A +L LPDS++KKS Sbjct: 252 KALIRHAIEEGDADFERVAQA---IRSTDALDYTRNIAQEQANIALSALDGLPDSAYKKS 308 Query: 310 LMEVVDFCLQR 320 L ++V+F L R Sbjct: 309 LQDLVNFSLAR 319 >gi|117617957|ref|YP_855472.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559364|gb|ABK36312.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 323 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 138/314 (43%), Positives = 195/314 (62%), Gaps = 1/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN LIL R+ SDV +I + Y++ +GGKR+RPMLT+ A L Y G++H+ Sbjct: 9 LCAADMTAVNELILARLQSDVSLINQLGFYIVSAGGKRMRPMLTVMAARALGYEGEDHLK 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IEFIHT+TLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M+ E + Sbjct: 69 LAAIIEFIHTSTLLHDDVVDESDLRRGRETANALFGNAASVLVGDYLYSRSFQMMSELSN 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E LS T+AEGE+ QL + D TEE Y+ VI KTA LF AA +++++ Sbjct: 129 LRVMEILSDATNTIAEGEVLQLMNCNDPDTTEESYMTVIYCKTAKLFEAATRLAAVLTHQ 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 V QA+ YG LG AFQ++DDV+DY + +EMGKN+G+D GKPTLP++ A + G+ Sbjct: 189 PEPVEQAMTDYGKYLGTAFQIIDDVMDYCSQSDEMGKNVGDDLAEGKPTLPLLRAMEVGS 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ + I + + +E+L + I+ AL + RA KA +L LPDS Sbjct: 249 PEERQLVRDAI-EHRNGMEHLDRILAILDRTGALEYSRMRAREEADKAIAALAILPDSRH 307 Query: 307 KKSLMEVVDFCLQR 320 K++L + +QR Sbjct: 308 KQALETLAHMAVQR 321 >gi|71906297|ref|YP_283884.1| polyprenyl synthetase [Dechloromonas aromatica RCB] gi|71845918|gb|AAZ45414.1| Polyprenyl synthetase [Dechloromonas aromatica RCB] Length = 341 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 137/320 (42%), Positives = 201/320 (62%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L DM+ V+ +I R+ SDV ++ V +Y+I SGGKR+RP L L A L+Y+ Sbjct: 22 LEQLYALIGPDMKAVDAVIRDRLYSDVVLVRQVAEYIISSGGKRMRPALVLLAAGALDYQ 81 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H +A +EFIHTATLLHDDVVD+SALRRG+ A ++GN SVLVGDFL S+AF M Sbjct: 82 GTRHQEMAAVVEFIHTATLLHDDVVDESALRRGRDTANAMFGNAASVLVGDFLYSRAFQM 141 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + ++ LS +AEGE+ QL + DV E Y+ VI KTA LF AA ++ Sbjct: 142 MVAVDNMRVMQVLSDATNVIAEGEVLQLMNCHDADVDEARYMQVIHYKTAKLFEAAAQLG 201 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ V +AL +YGM+LG AFQL+DDVLDY G+ + GK+IG+D GKPTLP+I Sbjct: 202 AILGQATPEVEKALTAYGMHLGTAFQLIDDVLDYSGQEADTGKHIGDDLAEGKPTLPLIY 261 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q GT + + I +G ++ + +R + AL + RA + AK +++C Sbjct: 262 VMQHGTPEQAACVRKAIEEG--GRDDFPQVLDAIRNSGALDHAKARAIQEAELAKSAIQC 319 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L DS++KK+L+++ F ++R Sbjct: 320 LGDSNYKKALLQLTLFAVER 339 >gi|119897305|ref|YP_932518.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72] gi|119669718|emb|CAL93631.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72] Length = 341 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 133/310 (42%), Positives = 195/310 (62%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ V+ LI K + SDV +I V +Y+I SGGKRLRP L L +A + YRG H LA Sbjct: 32 DMQAVDALIRKALYSDVVLIRQVAEYIINSGGKRLRPALVLFSAGAVGYRGTQHHRLAAV 91 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHT+TLLHDDVVD+S LRRG A ++GN SVLVGDFL ++AF M++E S + Sbjct: 92 VEFIHTSTLLHDDVVDESELRRGNKTANALFGNAASVLVGDFLYTRAFQMMVEVDSMRVM 151 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ +AEGE+ QL N DV EDYL VI+ KTA LF AA + +++ G ++ Sbjct: 152 QILADATNIIAEGEVLQLLNCHNADVEVEDYLRVIRYKTAKLFEAASRLGAVLGGADPAL 211 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +++ ++GM+LG AFQL+DDVLDY + + GK++G+D GKPTLP+I Q G+ + Sbjct: 212 EESMAAFGMHLGTAFQLIDDVLDYSADEADTGKHLGDDLAEGKPTLPLIHVMQHGSAEQA 271 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I +G ++ +++ AL T A +A +L+ LP S++K+SL Sbjct: 272 ALVRGAIENG--GRDDFAAVLAAIQQTGALEVTRRHAREEADRAIAALQGLPPSNFKESL 329 Query: 311 MEVVDFCLQR 320 +++ DF ++R Sbjct: 330 LQLSDFAVER 339 >gi|217974480|ref|YP_002359231.1| polyprenyl synthetase [Shewanella baltica OS223] gi|217499615|gb|ACK47808.1| Polyprenyl synthetase [Shewanella baltica OS223] Length = 331 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 138/310 (44%), Positives = 191/310 (61%), Gaps = 1/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y G+ H+ LA Sbjct: 21 DMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVSYEGEAHLKLAAI 80 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M+ E S + L Sbjct: 81 IEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELDSMKVL 140 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++ ++AG Sbjct: 141 RVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLAGVLAGATLEQ 200 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL +YG LG AFQL DD+LDY + +E+GKNIG+D GKPTLP+I A GT EK Sbjct: 201 ETALGNYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIYAIAHGTDEEK 260 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + I G + + K + AL T+ +A +KA ++L LPDS +K++L Sbjct: 261 HLIRQAIEQGD-GTQAIDKIVAALHHCGALNYTQQKAIEESEKAIEALSILPDSDYKQAL 319 Query: 311 MEVVDFCLQR 320 + + + R Sbjct: 320 VALAKISVDR 329 >gi|261342632|ref|ZP_05970490.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC 35316] gi|288315280|gb|EFC54218.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC 35316] Length = 323 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 134/319 (42%), Positives = 198/319 (62%), Gaps = 5/319 (1%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+G+ Sbjct: 6 INELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQGNA 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+ Sbjct: 66 HVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTS 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S + LE +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S ++ Sbjct: 126 LGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQCSGIL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G + + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ A + Sbjct: 186 GGCTDVQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPLLHAMR 245 Query: 244 RGTKREKNFWKSTI--NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 GT + + I +G+ +E + +A I + +L T RA KA +L+ + Sbjct: 246 NGTPEQAKMIREAIEQGNGRHLLEPVLEAMAI---SGSLEWTRQRAEEEADKAIAALQVI 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS W+ +L+ + +QR Sbjct: 303 PDSPWRDALIGLAHIAVQR 321 >gi|213582666|ref|ZP_03364492.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 319 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 133/311 (42%), Positives = 193/311 (62%), Gaps = 1/311 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 301 Query: 301 LPDSSWKKSLM 311 LPD+ W+++L+ Sbjct: 302 LPDTPWREALI 312 >gi|213859721|ref|ZP_03385425.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 318 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 133/311 (42%), Positives = 193/311 (62%), Gaps = 1/311 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 301 Query: 301 LPDSSWKKSLM 311 LPD+ W+++L+ Sbjct: 302 LPDTPWREALI 312 >gi|146313257|ref|YP_001178331.1| octaprenyl diphosphate synthase [Enterobacter sp. 638] gi|145320133|gb|ABP62280.1| Trans-hexaprenyltranstransferase [Enterobacter sp. 638] Length = 323 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 133/317 (41%), Positives = 195/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + +LT +DM VN +IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+GD Sbjct: 6 INELTAQDMAGVNAVILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQGDA 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+ Sbjct: 66 HVNIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTS 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S ++ Sbjct: 126 LGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGIL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ A + Sbjct: 186 AGCTEAQERGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPLLHAMR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G+ + + I G L+ M +L T RA KA +++ +PD Sbjct: 246 NGSPDQAKLIREAIEQGN-GRHLLEPVLETMAICGSLEWTRQRAEEEADKAITAIQVIPD 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S W+ +L+ + +QR Sbjct: 305 SPWRDALIGLAHIAVQR 321 >gi|217970068|ref|YP_002355302.1| trans-hexaprenyltranstransferase [Thauera sp. MZ1T] gi|217507395|gb|ACK54406.1| Trans-hexaprenyltranstransferase [Thauera sp. MZ1T] Length = 322 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 133/310 (42%), Positives = 192/310 (61%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ V+ +I R+ SDV +I + +Y++ SGGKRLRP L L A L+YRG +H LA Sbjct: 13 DMQAVDTVIRNRLHSDVALIRRIAEYIVGSGGKRLRPALVLYAAGALDYRGVHHHELAAV 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTA+LLHDDVVD+S LRRGK A +GN ++VLVGDFL S+AF M++ + Sbjct: 73 VEFIHTASLLHDDVVDESDLRRGKRTANAAFGNASAVLVGDFLYSRAFQMMVGVDEMRVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ +AEGE+ QL N DV EDYL VI+ KTA LF AA + ++AG +++ Sbjct: 133 RVLADATNIIAEGEVLQLLNCHNADVVIEDYLRVIRYKTAKLFEAAARLGGIVAGADDAL 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 Q L ++GM+LG AFQL+DDVLDY + + GK++G+D GKPTLP+I Q GT + Sbjct: 193 EQRLAAFGMHLGTAFQLIDDVLDYSADEADTGKHLGDDLAEGKPTLPLIHVMQHGTAEQG 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G + ++ AL +T A + + A D++ LP S +K++L Sbjct: 253 ALVRHAIEGGGRG--DFAAVLAAIQSTGALEETRRYAEAEAKLAIDAISVLPPSIFKEAL 310 Query: 311 MEVVDFCLQR 320 +++ DF ++R Sbjct: 311 LQLSDFAVRR 320 >gi|163802656|ref|ZP_02196547.1| malate dehydrogenase [Vibrio sp. AND4] gi|159173544|gb|EDP58364.1| malate dehydrogenase [Vibrio sp. AND4] Length = 323 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 132/319 (41%), Positives = 196/319 (61%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYHG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL N D TEE+Y+ VI SKTA LF +A ++ + Sbjct: 124 TELGSIKILKLMSDAVNVIAEGEVQQLMNCNNPDTTEENYMQVIYSKTARLFESATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ +V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPENVEVALQNYGKFLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 T + I ++ L++ +M++ +L TE +A KA L L Sbjct: 244 MHNTTPENAAMIREAIEKAN-GMDRLEEILAVMQDAGSLAYTEQKAVEEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + ++R Sbjct: 303 PESDYKQALITLAHMAVKR 321 >gi|323493611|ref|ZP_08098732.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546] gi|323312134|gb|EGA65277.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546] Length = 323 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 135/319 (42%), Positives = 192/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKR+RP+L + +A L Y+G Sbjct: 4 KAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIVSGGGKRIRPLLAVLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 EAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSLKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILNEAPAEVELALQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT+ + + I +E L M E +L T +AY KA L L Sbjct: 244 MEHGTEEQTQMIREAIEKAN-GMERLNDILATMEETGSLEYTRKKAYQEADKAIAELDVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 DS +K++L+ + + R Sbjct: 303 DDSVYKQALITLAHMSVHR 321 >gi|326423749|ref|NP_759657.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] gi|319999111|gb|AAO09184.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] Length = 333 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 134/319 (42%), Positives = 193/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 14 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSARALGYQG 73 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 74 NAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 133 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE+ QL + D TEE Y+ VI SKTA LF AA ++ + Sbjct: 134 TELGSMKILKLMSDAVNIIAEGEVLQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 193 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 194 ILNDAPAEVETALQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLHA 253 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + + I + +E L +M++ +L TE +A KA L+ L Sbjct: 254 MRHTNAENAQMIREAIENAN-GMERLDDILAVMQQAGSLTYTEAKAMEEADKAIAELQVL 312 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + ++R Sbjct: 313 PESEYKQALIALAHMAVKR 331 >gi|237730107|ref|ZP_04560588.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2] gi|226908713|gb|EEH94631.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2] Length = 370 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 50 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 109 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 110 ENAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 169 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 170 MTSLGSLKVLEVMSKAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 229 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 230 GILAGCSEEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 289 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I G L+ M +L T RA KA +L+ Sbjct: 290 AMRHGTPEQALMIRQAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 348 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 349 LPDTPWREALIGLAHIAVQR 368 >gi|242240764|ref|YP_002988945.1| octaprenyl diphosphate synthase [Dickeya dadantii Ech703] gi|242132821|gb|ACS87123.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech703] Length = 323 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L+ +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQITALSAQDMAAVNQIILEQLNSDVALINQLGHYIISGGGKRIRPMIAVLAARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLSSLRVLAVMSDAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILADADTTCENALRDYGRYLGTAFQLIDDLLDYNADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G ++ + I G L M+E +L T RA KA +L+C Sbjct: 243 AMHHGNPEQRRMIRQAIEQGN-GRHLLIPVLAAMQECGSLEYTRQRAEEEADKAIAALQC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S +K +L + +QR Sbjct: 302 LPRSDFKTALESLAHLAVQR 321 >gi|50119637|ref|YP_048804.1| octaprenyl diphosphate synthase [Pectobacterium atrosepticum SCRI1043] gi|49610163|emb|CAG73603.1| octaprenyl-diphosphate synthase [Pectobacterium atrosepticum SCRI1043] Length = 323 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y Sbjct: 3 LEQITTLTTQDMAAVNKVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALAYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A ++G + + + I +G L+ M++ +L T RA KA ++L+ Sbjct: 243 AMRQGNAEQSSLIRQAIEEGN-GRHLLEPILAAMQQCGSLDYTRQRAEEEADKAINALQL 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + ++ +L + +QR Sbjct: 302 LPKTPYRMALEGLAHLAVQR 321 >gi|197287216|ref|YP_002153088.1| octaprenyl diphosphate synthase [Proteus mirabilis HI4320] gi|227357090|ref|ZP_03841460.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906] gi|194684703|emb|CAR46670.1| octaprenyl-diphosphate synthase [Proteus mirabilis HI4320] gi|227162782|gb|EEI47745.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906] Length = 323 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 134/314 (42%), Positives = 190/314 (60%), Gaps = 1/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + T L+Y+GD H+ Sbjct: 9 LTSADMAAVNDAILYQLNSDVSLINQLGYYIISGGGKRIRPMIAVLTGRALDYQGDKHIS 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M+ + S Sbjct: 69 VAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQMMTDLDS 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ +S +AEGE+ QL + D+TE+DY+ VI SKTA LF AA S+++ G Sbjct: 129 MRVLKLMSSATNVIAEGEVLQLMNCNDPDITEDDYMQVIYSKTARLFEAASHASAILCGA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +A + YG LG AFQL+DD+LDY + ++GKN G+D GKPTLP++ A G Sbjct: 189 TPEQEKAFQDYGRYLGTAFQLIDDLLDYDADNTQLGKNTGDDLDEGKPTLPLLHAMHHGN 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + E + I G L M++ +L T +A KA ++L +PDSS+ Sbjct: 249 ETESQLIRQAIEKGN-GRHLLDTVLKTMKQCGSLEYTRQKAEEEADKAIEALAIIPDSSY 307 Query: 307 KKSLMEVVDFCLQR 320 K +L+ + +QR Sbjct: 308 KDALIGLAHVAVQR 321 >gi|104780055|ref|YP_606553.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48] gi|95109042|emb|CAK13738.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48] Length = 322 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 132/312 (42%), Positives = 196/312 (62%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ +AG + Sbjct: 133 QILSKATRVIAEGEVLQLSRVRDASTTEEIYMDVIRGKTAMLFEASTHSAAALAGASDEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I A + GT + Sbjct: 193 REALRTFGDHLGVAFQLVDDLLDYKGDSETLGKNVGDDLAEGKPTLPLIYAMREGTAEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L++ I + + AL T A Y +A L LP S ++ +L Sbjct: 253 ALVRQAIQKG--GLEDLEQIRIAVEASGALAYTAQMARDYVARAIACLEVLPASEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|320157514|ref|YP_004189893.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio vulnificus MO6-24/O] gi|319932826|gb|ADV87690.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O] Length = 323 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 134/319 (42%), Positives = 193/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE+ QL + D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNIIAEGEVLQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPAEVETALQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + + I + +E L +M++ +L TE +A KA L+ L Sbjct: 244 MRHTNAENAQMIREAIENAN-GMERLDDILAVMQQAGSLTYTEAKAMEEADKAIAELQVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + ++R Sbjct: 303 PESEYKQALIALAHMAVKR 321 >gi|253686958|ref|YP_003016148.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753536|gb|ACT11612.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 323 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L+Y Sbjct: 3 LEQITTLTAQDMAAVNNVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALDYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + + + I +G L+ M++ +L T RA KA +L+ Sbjct: 243 AMHNGNAEQSSLIRKAIEEGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAISALQQ 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ ++ +L + +QR Sbjct: 302 LPETPYRIALEGLAHLAVQR 321 >gi|157148758|ref|YP_001456077.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895] gi|157085963|gb|ABV15641.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895] Length = 498 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 178 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 237 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 238 ENAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 297 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 298 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 357 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 358 GLLAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 417 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 418 AMRNGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMTACGSLEWTRQRAEDEADKAIAALQI 476 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 477 LPDTPWREALIGLAHIAVQR 496 >gi|294139556|ref|YP_003555534.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12] gi|293326025|dbj|BAJ00756.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12] Length = 323 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 135/310 (43%), Positives = 194/310 (62%), Gaps = 1/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN LI ++ SDV +I + Y+I GGKR+RP+LT+ A ++Y+G+ H+ LA Sbjct: 13 DMQDVNKLIYSQLESDVALINQLGFYIINGGGKRMRPLLTILAARAIDYQGEAHLKLAAI 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M+ E S + L Sbjct: 73 IEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELGSMKVL 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E L+ LAEGE+ QL + D +EE+Y+ VI KTA LF AA ++ ++A + Sbjct: 133 EMLADATNVLAEGEVLQLMNCNDPDTSEENYMRVIYCKTAKLFEAATRLAGVLADSPIEI 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + AL YG LG AFQL DD+LDY E+GKNIG+D GKPTLP+I A GT++E+ Sbjct: 193 QTALADYGKYLGTAFQLTDDLLDYTANTEELGKNIGDDLAEGKPTLPLIYAIANGTEKEQ 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G + + + + + AL T RA KA ++L C+PDS +K++L Sbjct: 253 ALIRKAIELGD-GTQYIDEILTALNKCGALEYTLNRALEESDKAIEALSCIPDSDYKQAL 311 Query: 311 MEVVDFCLQR 320 + + ++R Sbjct: 312 ISLAKIAVER 321 >gi|227113758|ref|ZP_03827414.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 323 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L+Y Sbjct: 3 LEQITALTAQDMAAVNNVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALDYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G + + + I +G L+ M++ +L T RA KA +L+ Sbjct: 243 AMRHGNAEQSSLIRKAIEEGN-GRHLLEPVLSAMQQCGSLDYTRQRAEEEADKAISALQQ 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ ++ +L + +QR Sbjct: 302 LPETPYRMALEGLAHLAVQR 321 >gi|329997657|ref|ZP_08302894.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3] gi|328538933|gb|EGF64988.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3] Length = 323 Score = 255 bits (651), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GSAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQCA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+A +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GLLADCTAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L M +L T+ RA KA +L+ Sbjct: 243 AMHHGTPDQSAMIRGAIEQGN-GRHLLDAVLETMATCGSLEWTQKRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|56477995|ref|YP_159584.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1] gi|56314038|emb|CAI08683.1| Polyprenyl synthetase (EC 2.5.1.-), gene: ISPB OR NE1915 [Aromatoleum aromaticum EbN1] Length = 322 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 134/310 (43%), Positives = 192/310 (61%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ V+ +I +R+ SDV +I V +Y+I SGGKRLRP L L +A + YRG +H LA Sbjct: 13 DMQAVDAVIRERLHSDVVLIRQVAEYIIHSGGKRLRPALVLFSAGAMGYRGQSHHQLAAV 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG A ++GN SVLVGDFL ++AF M++ + Sbjct: 73 VEFIHTATLLHDDVVDESELRRGNKTANALFGNAASVLVGDFLYTRAFQMMVGVGDMRVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ +AEGE+ QL N DV EDYL VI+ KTA LF AA + +++ G Sbjct: 133 QVLADATNIIAEGEVLQLLNCHNADVDIEDYLRVIRYKTAKLFEAATRLGAILGGANEEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + ++GM+LG AFQ++DDVLDY + GK++G+D GKPTLP+I A + GT + Sbjct: 193 ERKVAAFGMHLGTAFQIIDDVLDYSSDEAATGKHLGDDLAEGKPTLPLIHAMKHGTAEQS 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 ++ I G ++ + +RE AL + A + GQ A D+L LP S +K +L Sbjct: 253 ARVRNAIESG--GRDDFEAVLAAIRETGALEEARRWARAEGQFAIDALEVLPPSIFKDAL 310 Query: 311 MEVVDFCLQR 320 +++ DF + R Sbjct: 311 LQLSDFAVVR 320 >gi|307129369|ref|YP_003881385.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937] gi|306526898|gb|ADM96828.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937] Length = 323 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 131/320 (40%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L+ +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + TA L Y+ Sbjct: 3 LEQITALSAQDMAAVNQTILDQLNSDVVLINQLGNYIISGGGKRIRPMIAVLTARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + +S +AEGE+ QL + D+TE+ Y+ VI SKTA LF AA + S Sbjct: 123 MTSLASLRVMSVMSDAVNVIAEGEVLQLMNCNDPDITEDSYMRVIYSKTARLFEAAAQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILSGASSEQELALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + ++ + I +G L+ M+ +L T RA KA +++C Sbjct: 243 AMHHGNEEQRTMIRQAIEEGN-GRHLLEPVLAAMQSCGSLTYTRQRAEEEADKAITAIQC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + +QR Sbjct: 302 LPASDFRTALEGLAHLAVQR 321 >gi|291086510|ref|ZP_06571551.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220] gi|291067630|gb|EFE05739.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220] Length = 498 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 178 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 237 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 238 ENAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 297 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 298 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 357 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 358 GILAGCSAEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 417 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I G L+ M +L T RA KA +L+ Sbjct: 418 AMRHGTPEQAQMIRQAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 476 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 477 LPDTPWREALIGLAHIAVQR 496 >gi|152972111|ref|YP_001337257.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896694|ref|YP_002921439.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae NTUH-K2044] gi|262042746|ref|ZP_06015900.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150956960|gb|ABR78990.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549021|dbj|BAH65372.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039971|gb|EEW41088.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 323 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GSAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQCA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+A +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GLLADCTAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L M +L T+ RA KA +L+ Sbjct: 243 AMHHGTPDQSAMIRGAIEQGN-GRHLLDAVLETMATCGSLEWTQKRAEEEADKAIAALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|304396333|ref|ZP_07378214.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB] gi|308189085|ref|YP_003933216.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1] gi|304355842|gb|EFM20208.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB] gi|308059595|gb|ADO11767.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1] Length = 323 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 136/320 (42%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + +A + Y+ Sbjct: 3 LEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISGGGKRIRPMIAVLSARAMGYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDLHVTNAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSMGSLRILALMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAASQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAEATPEEEKALQDYGRYLGTAFQLIDDLLDYSADGETLGKNTGDDLSEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G+ + + I G L+ M + +L T RA KA ++LR Sbjct: 243 AMQHGSPEQAKMIREAIEQGN-GRHLLEPVLEAMNQCGSLEWTRSRAEQEADKAIEALRI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S W+ +L + +QR Sbjct: 302 LPESPWRSALESLAHMSVQR 321 >gi|261250197|ref|ZP_05942773.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] gi|260939313|gb|EEX95299.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] Length = 345 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 192/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKR+RP+L + +A L Y+G Sbjct: 26 KAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIVSGGGKRIRPLLAVLSARALGYQG 85 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 86 EAHTTSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 145 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ + Sbjct: 146 TELGSLKILKLMSDAVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 205 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V AL++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 206 ILNDAPEDVELALQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 265 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + I +E L M + +L T +AY KA L L Sbjct: 266 MKNGSAEQTAMIREAIEKAN-GMERLNDILAAMEQTGSLEYTRQKAYQEADKAIAELNVL 324 Query: 302 PDSSWKKSLMEVVDFCLQR 320 +S +K++L+ + + R Sbjct: 325 EESVYKQALVTIAHMAVHR 343 >gi|114330832|ref|YP_747054.1| farnesyltranstransferase [Nitrosomonas eutropha C91] gi|114307846|gb|ABI59089.1| Farnesyltranstransferase [Nitrosomonas eutropha C91] Length = 322 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 200/320 (62%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + ++ KDM +V+ +I +++ S V ++ V +Y+I SGGKRLRP L + A + +Y+ Sbjct: 3 IESIRNVIAKDMGEVDNVIQQKLHSQVVLVRQVSEYIIHSGGKRLRPALVILAAGLYDYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA +EFIHTATLLHDDVVD+S LRR + A ++GN SVLVGDFL S+AF M Sbjct: 63 GTHHYNLAAVVEFIHTATLLHDDVVDESQLRRNQATANALFGNAASVLVGDFLYSRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + +E L+ T+AEGE+ QL ++ DV EE+YL VI+ KTA LF AA + Sbjct: 123 MVEVDNMRVMEVLADATNTIAEGEVLQLLNCRDPDVEEENYLQVIRFKTAKLFEAAGRLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G + +AL +YGM+LG AFQLVDD+LDY G ++ GKN+G+D GKPTLP+I Sbjct: 183 AILGGATPAEEEALAAYGMHLGTAFQLVDDLLDYSGNDHDTGKNLGDDLAEGKPTLPLIF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + N + I G + I+++ AL + A A + Sbjct: 243 AMRAGTTDQANTVRHAIESG--GKDGFGPVLEIIQKTGALDYAKQCAQKEANMATSVIST 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L DS +K+ L+E+ +F + R Sbjct: 301 LRDSIYKQCLLELAEFAVSR 320 >gi|226329701|ref|ZP_03805219.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198] gi|225202887|gb|EEG85241.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198] Length = 323 Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 132/314 (42%), Positives = 191/314 (60%), Gaps = 1/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + T L+Y+GD H+ Sbjct: 9 LTSADMTAVNEAILYQLNSDVSLINQLGYYIISGGGKRIRPMIAVLTGRALDYQGDKHIS 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M+ + S Sbjct: 69 VAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQMMTDLDS 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ +S +AEGE+ QL + D++E+DY+ VI SKTA LF AA S++++G Sbjct: 129 MRVLKLMSSATNVIAEGEVLQLMNCNDPDISEDDYMQVIYSKTARLFEAASHASAILSGA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +A + YG LG AFQL+DD+LDY + N++GKN G+D GKPTLP++ A G Sbjct: 189 TPEQEKAFQDYGRYLGTAFQLIDDLLDYDADNNQLGKNTGDDLDEGKPTLPLLHAMHNGN 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + E + I G L M++ +L T +A KA ++L +P+S + Sbjct: 249 EEESKLIRQAIEQGN-GRHLLDTVLNTMKQCGSLEYTRQKAEEEADKAIEALSIIPNSPY 307 Query: 307 KKSLMEVVDFCLQR 320 K +L+ + +QR Sbjct: 308 KDALIGLAHVAVQR 321 >gi|261820112|ref|YP_003258218.1| octaprenyl diphosphate synthase [Pectobacterium wasabiae WPP163] gi|261604125|gb|ACX86611.1| Trans-hexaprenyltranstransferase [Pectobacterium wasabiae WPP163] Length = 323 Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y Sbjct: 3 LEQITKLTTQDMAAVNKVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALAYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + + ++ I +G L+ M++ +L T RA KA +L+ Sbjct: 243 AMHHGNAEQSSLIRNAIEEGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAISALQR 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ ++ +L + +QR Sbjct: 302 LPETPYRVALEGLAHLAVQR 321 >gi|296104900|ref|YP_003615046.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059359|gb|ADF64097.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 323 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GKAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTAAQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G+ + + I G L+ M +L T RA KA +L+ Sbjct: 243 AMHNGSADQAKMIREAIEQGN-GRHLLEPVLETMAICGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDS W+ +L+ + +QR Sbjct: 302 IPDSPWRDALIGLAHIAVQR 321 >gi|254435950|ref|ZP_05049457.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] gi|207089061|gb|EDZ66333.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] Length = 322 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 135/315 (42%), Positives = 193/315 (61%), Gaps = 2/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL DM+ V+ LI +R+ SDV +I + Y+I SGGKRLRPM+ L +A Y+G H+ Sbjct: 8 DLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQGSYHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD S LRRG+ A +WG++ SVLVGDFL S+AF M++ Sbjct: 68 DIAAIIEFIHTATLLHDDVVDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVGVD 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S +E L+ T+AEGE+ QL D TEE YL +I+SKTA LF AA ++ +++ Sbjct: 128 SMRVMEILARTTNTIAEGEVMQLLNCHEPDTTEECYLEIIRSKTAKLFEAATQLGAVLCH 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 ++ + + +YGM+LG AFQL DDVLDY ++GKNIG+D GKPTLP+I A +G Sbjct: 188 RPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGKNIGDDLAEGKPTLPLIYAMSKG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + ++ I G ENL + + + A+ T A KA +++ +P S Sbjct: 248 STSHVKVIRNAIESG--GRENLAEVIEAIESSGAIAYTAEAARREADKAMQAVKNIPASP 305 Query: 306 WKKSLMEVVDFCLQR 320 ++++L+ + F R Sbjct: 306 YQEALLNLAKFAAYR 320 >gi|320540162|ref|ZP_08039817.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str. Tucson] gi|320029828|gb|EFW11852.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str. Tucson] Length = 333 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT +DM VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y Sbjct: 13 LEQITALTAQDMMAVNAAILEQLHSDVTLINQLCYYIISGGGKRIRPMIAVLAARALNYE 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 73 GNKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + KS L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 133 MTSLKSLRVLALMSEAVNVIAEGEVLQLMNVHDPDITEESYMQVIYSKTARLFEAAAQSS 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G + +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 193 AILSGANQAEEKALQDYGRYLGTAFQLIDDLLDYSANGSTLGKNTGDDLNEGKPTLPLLH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + +++ + I G L+ M++ +L T RA KA +L+ Sbjct: 253 AMHHGDEAQRSMIREAIEQGN-RRHLLEPVLQAMQQCASLEYTHNRAEEEANKAIAALQA 311 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + +QR Sbjct: 312 LPKSPYRDALEGLARLAVQR 331 >gi|145300249|ref|YP_001143090.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853021|gb|ABO91342.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp. salmonicida A449] Length = 323 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 137/314 (43%), Positives = 194/314 (61%), Gaps = 1/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN LIL R+ SDV +I + Y++ +GGKR+RPMLT+ A L Y G +H+ Sbjct: 9 LCAADMTAVNELILARLQSDVSLINQLGFYIVSAGGKRMRPMLTVMAARALGYEGQDHLK 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IEFIHT+TLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M+ E + Sbjct: 69 LAAIIEFIHTSTLLHDDVVDESDLRRGRETANALFGNAASVLVGDYLYSRSFQMMSELSN 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E LS T+AEGE+ QL + D TE+ Y+ VI KTA LF AA +++++ Sbjct: 129 LRVMEILSDATNTIAEGEVLQLMNCNDPDTTEQSYMTVIYCKTAKLFEAATRLAAVLTHQ 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 V QA+ YG LG AFQ++DDV+DY + +EMGKN+G+D GKPTLP++ A + G+ Sbjct: 189 PEPVEQAMTDYGKYLGTAFQIIDDVMDYCSQSDEMGKNVGDDLAEGKPTLPLLRAMEVGS 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ + I + + +E+L + I+ AL + RA KA +L LPDS Sbjct: 249 PEERQLVRDAI-EHRNGMEHLDQILGILDRTGALEYSRMRAREEADKAIAALAILPDSQH 307 Query: 307 KKSLMEVVDFCLQR 320 K++L + +QR Sbjct: 308 KQALETLAQMAVQR 321 >gi|119775962|ref|YP_928702.1| trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B] gi|119768462|gb|ABM01033.1| Trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B] Length = 333 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 140/324 (43%), Positives = 196/324 (60%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y Sbjct: 13 LNAIRQLADADMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVNYN 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 73 GEGHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S + L+ L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++ Sbjct: 133 MTELGSMKVLQVLADATNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATRLA 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG V +AL YG LG AFQL+DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 193 AVLAGSDEKVEEALADYGKYLGTAFQLIDDLLDYTSDAEELGKNIGDDLAEGKPTLPLIY 252 Query: 241 AFQRGTKREKNFWKSTIN--DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 A G +RE+ ++ I DG ++E + A + AL T RA KA +L Sbjct: 253 AIGHGNEREQGLIRNAIEKADGTGAIEEILTA---LHRCGALDYTRRRAEEEADKAIAAL 309 Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322 LP+ +K +L + + R N Sbjct: 310 SVLPEGDFKTALESLARIAVSRSN 333 >gi|152978590|ref|YP_001344219.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z] gi|150840313|gb|ABR74284.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z] Length = 330 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM+KVN IL ++ SDV +I + Y+I GGKR+RPM+ L A L Y Sbjct: 10 IKAIQALIEPDMQKVNTEILAQLNSDVALINQLGFYIIQGGGKRIRPMIALLAARALNYE 69 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ + A IEFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 70 GEKMPVCAAFIEFIHTASLLHDDVVDESDMRRGRATANAAFGNAASVLVGDFIYTRAFQL 129 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S + L +S LAEGE++QL + + TEE+Y+ VI KTA LF + + + Sbjct: 130 MAKLNSLKMLTIMSDATNVLAEGEVQQLMNVNDPETTEENYMKVIYRKTARLFEVSTQAA 189 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL+ YG LG AFQLVDDVLDY + MGKN+G+D GKPTLP++ Sbjct: 190 AIMANADEKIESALQQYGRYLGTAFQLVDDVLDYSAQAETMGKNVGDDLAEGKPTLPLLH 249 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT+ + +S I G E + + IM ++++L RA + QKA D+L Sbjct: 250 AMRHGTEEQSALIRSAIEQGG-KREIIAEVLAIMAQHKSLDHAMERAKAEAQKAVDALTI 308 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ +K++L+ + + R Sbjct: 309 LPDNEYKRALISLAYQSVNR 328 >gi|206578772|ref|YP_002236401.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342] gi|288933385|ref|YP_003437444.1| dimethylallyltranstransferase [Klebsiella variicola At-22] gi|290511564|ref|ZP_06550933.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55] gi|206567830|gb|ACI09606.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342] gi|288888114|gb|ADC56432.1| Dimethylallyltranstransferase [Klebsiella variicola At-22] gi|289776557|gb|EFD84556.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55] Length = 323 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GSAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQCA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GMLADCSAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L M +L T+ RA KA +L+ Sbjct: 243 AMHHGTPDQAAMIRGAIEQGN-GRHLLDAVLETMATCGSLEWTQKRAEEEADKAIAALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|188532487|ref|YP_001906284.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99] gi|188027529|emb|CAO95376.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99] Length = 324 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 135/321 (42%), Positives = 196/321 (61%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEY 59 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ LA + +Y Sbjct: 3 LEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAINDY 62 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF Sbjct: 63 AGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 122 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + Sbjct: 123 MMTSLGSLKVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQS 182 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+++AG S QAL+ YG +G AFQL+DD+LDY + + +GKN+G+D GKPTLP++ Sbjct: 183 SAILAGATASQEQALQDYGRYIGTAFQLIDDLLDYSADGDTLGKNVGDDLSEGKPTLPLL 242 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + GT + + ++ I +G L+ M + +L T A KA +L+ Sbjct: 243 HAMRNGTPEQASLIRTAIEEGN-GRHLLETVLETMNQCGSLEWTRNAAEQEADKAIAALK 301 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP+S W+ +L + +QR Sbjct: 302 VLPESPWRSALEALAHMSVQR 322 >gi|77166478|ref|YP_345003.1| trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707] gi|76884792|gb|ABA59473.1| Trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707] Length = 345 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 135/315 (42%), Positives = 193/315 (61%), Gaps = 2/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL DM+ V+ LI +R+ SDV +I + Y+I SGGKRLRPM+ L +A Y+G H+ Sbjct: 31 DLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQGSYHI 90 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD S LRRG+ A +WG++ SVLVGDFL S+AF M++ Sbjct: 91 DIAAIIEFIHTATLLHDDVVDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVGVD 150 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S +E L+ T+AEGE+ QL D TEE YL +I+SKTA LF AA ++ +++ Sbjct: 151 SMRVMEILARTTNTIAEGEVMQLLNCHEPDTTEECYLEIIRSKTAKLFEAATQLGAVLCH 210 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 ++ + + +YGM+LG AFQL DDVLDY ++GKNIG+D GKPTLP+I A +G Sbjct: 211 RPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGKNIGDDLAEGKPTLPLIYAMSKG 270 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + ++ I G ENL + + + A+ T A KA +++ +P S Sbjct: 271 STSHVKVIRNAIESG--GRENLAEVIEAIESSGAIAYTAEAARREADKAMQAVKNIPASP 328 Query: 306 WKKSLMEVVDFCLQR 320 ++++L+ + F R Sbjct: 329 YQEALLNLAKFAAYR 343 >gi|315127756|ref|YP_004069759.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas sp. SM9913] gi|315016270|gb|ADT69608.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas sp. SM9913] Length = 323 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM VN LI ++ SDV ++ + Y++ SGGKR+RPML + A L Y+ Sbjct: 3 IKAIQALIESDMNDVNQLIHAQMRSDVALVNQLGLYIVNSGGKRVRPMLAILAAKALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H+ LA IEFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ +++F + Sbjct: 63 GKDHITLATIIEFIHTATLLHDDVVDESNLRRGTPTANAEFGNAASVLVGDFIYTRSFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + ++ L+ +AEGE+ QL + D TE Y+ VI SKTA LF AA ++ Sbjct: 123 MVGLGKMQIMQVLADATNIIAEGEVLQLMNCNDPDTTEASYMQVIYSKTAKLFEAATGLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I +SV +AL YGM+LG AFQLVDDVLDY + +++GKNIG+D GKPTLP+I Sbjct: 183 AIITDQDDSVLEALNLYGMHLGTAFQLVDDVLDYNADADQLGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G++ + + I +E+L + ++ AL T +A KA L C Sbjct: 243 AMQHGSEHQTQLIRDAIEHCN-GMEHLDEILAALKHTNALEFTMKKAEQEANKAIACLDC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L +SS+K++L+ + + R Sbjct: 302 LAESSYKQALISLARIAVDR 321 >gi|85712490|ref|ZP_01043538.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] gi|85693624|gb|EAQ31574.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] Length = 323 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 136/321 (42%), Positives = 194/321 (60%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + DL KDM+ VN LI +++ SDV +I + Y++ SGGKRLRP+L + + L Y Sbjct: 3 LKSINDLAQKDMQGVNALIGEQLSSDVALINQLGMYIVNSGGKRLRPLLAVLSCRALGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ LA IEFIHTATLLHDDVVD+S LRRG+ A V+GN+ SVLVGDFL ++AF M Sbjct: 63 GRAHLSLATIIEFIHTATLLHDDVVDESELRRGRKTANAVFGNEASVLVGDFLYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S L L+ +AEGE+ QL + D TE Y VI KTA LF AA +++ Sbjct: 123 MVQLDSMTILSILADATNVIAEGEVLQLMNCNDPDTTEARYFDVIYGKTAKLFEAATQLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ ++V + L YG LG AFQLVDD++DY + MGKN G+D GKPTLP++ Sbjct: 183 GVLTEQDSTVTEQLADYGRYLGTAFQLVDDLMDYTSDSQTMGKNAGDDLAEGKPTLPLLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + + + I G E+L+ M AL T +A Q+A++SL Sbjct: 243 AMWHGDEAARKLIREAIEQGD-GREHLETVLAAMHATGALEYTRQKALEVAQQARESLAV 301 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP+S +K++L+ + + R+ Sbjct: 302 LPESDYKQALIALTHLAVDRV 322 >gi|121593262|ref|YP_985158.1| dimethylallyltranstransferase [Acidovorax sp. JS42] gi|120605342|gb|ABM41082.1| Dimethylallyltranstransferase [Acidovorax sp. JS42] Length = 327 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 135/303 (44%), Positives = 192/303 (63%), Gaps = 2/303 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +V+ +I R+ S V ++ V +Y+I +GGKRLRP L L T LEY+G+ Sbjct: 14 LIADDMREVDKVIAARLQSSVPLVGSVAQYIISAGGKRLRPALLLLTCGALEYKGEQRFN 73 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E S Sbjct: 74 LAAVVEFIHTATLLHDDVVDESTLRRGRPTANETFGNPASVLVGDFLHTRSFQMMVEAGS 133 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ L+ +AEGE++QL + + + E YLHVI+SKTA LF A+ +++++AG Sbjct: 134 MRILQVLADATNVIAEGEVQQLMNTHDASLDEAGYLHVIRSKTAKLFEASARLAAILAGS 193 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QA YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I+A QRG+ Sbjct: 194 TPDIEQACADYGQALGTAFQVIDDVLDYDGDAQEMGKNLGDDLREGKVTLPLIIAMQRGS 253 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + ++ ++ I G S + L+ I+RE AL T A + + A D+ LP + + Sbjct: 254 QAQRELLRNVIETG--SADELQPVIAIIRETGALTATRDAAAAQARLAMDAAAKLPANPY 311 Query: 307 KKS 309 K Sbjct: 312 TKG 314 >gi|260596184|ref|YP_003208755.1| octaprenyl-diphosphate synthase [Cronobacter turicensis z3032] gi|260215361|emb|CBA27367.1| Octaprenyl-diphosphate synthase [Cronobacter turicensis z3032] Length = 323 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A L Y Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARALGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GKAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSIKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGASEAQERALQDYGRYLGTAFQLIDDLLDYSADGERLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L M +L T RA KA +L Sbjct: 243 AMHNGTPAQAQMIREAIEQGN-GRHLLDPVLETMAACGSLEWTRTRAEEEADKAIAALEI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L S W+ +L+ + +QR Sbjct: 302 LSPSPWRDALIALAHMSVQR 321 >gi|238756420|ref|ZP_04617729.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473] gi|238705350|gb|EEP97758.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473] Length = 323 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 133/315 (42%), Positives = 191/315 (60%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L+Y+G+ H+ Sbjct: 8 ELTAQDMAAVNATILDQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALDYQGNKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ + Sbjct: 68 KIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMMTSLE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L+ +S +AEGE+ QL N D+TE+ Y+ VI SKTA LF AA + SS++A Sbjct: 128 SLRVLQLMSEATNVIAEGEVMQLMNCNNPDITEDSYMRVIYSKTARLFEAASQSSSILAD 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 A + YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++ A G Sbjct: 188 ASPEQEMAFQDYGRYLGTAFQLIDDLLDYSADGSTLGKNTGDDLNEGKPTLPLLHAMNNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + + I +G L+ MR+ +L T RA KA +L+ LPD+ Sbjct: 248 TAEQAAMIRKAIEEGN-GRHLLEPVLEAMRQCGSLDYTRQRAEEEADKAIAALQILPDTP 306 Query: 306 WKKSLMEVVDFCLQR 320 ++++L + +QR Sbjct: 307 YRQALEGLAHIAVQR 321 >gi|218708400|ref|YP_002416021.1| octaprenyl-diphosphate synthase [Vibrio splendidus LGP32] gi|218321419|emb|CAV17369.1| Octaprenyl-diphosphate synthase [Vibrio splendidus LGP32] Length = 323 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 135/319 (42%), Positives = 193/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L L +A L Y+G Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 EAHITSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S LE +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TTLGSLRILELMSESVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILTESSPEIETAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G+ + + + I +E L +M+E +L T +AY KA L L Sbjct: 244 MHNGSPDQASMIREAIEKAN-GMERLDDIMSVMKETGSLEYTTNKAYEEADKAIAELSIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L + ++R Sbjct: 303 PESEYKQALTTLAHLAVKR 321 >gi|156935711|ref|YP_001439627.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894] gi|156533965|gb|ABU78791.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894] Length = 323 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A L Y Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARALGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GKAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGASEAQERALQDYGRYLGTAFQLIDDLLDYSADGERLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L M +L T RA KA +L Sbjct: 243 AMHNGTPAQAQMIREAIEQGN-GRHLLDPVLETMAACGSLEWTRARAEEEADKAIAALEI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L S W+ +L+ + +QR Sbjct: 302 LSPSPWRDALIALAHMSVQR 321 >gi|317046711|ref|YP_004114359.1| polyprenyl synthetase [Pantoea sp. At-9b] gi|316948328|gb|ADU67803.1| Polyprenyl synthetase [Pantoea sp. At-9b] Length = 323 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + +A L Y+ Sbjct: 3 LEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISGGGKRIRPMIAVLSARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GSQHITNAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + L +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSMGSLKILALMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + +AL+ YG +G AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAEATPAQEKALQDYGRYIGTAFQLIDDLLDYSADGETLGKNTGDDLSEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I +G L+ M++ +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRRAIEEGN-GRHLLEPVLEAMQQCGSLAWTRQRAEEEADKAIAALKI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ W+ +L + +QR Sbjct: 302 LPETPWRSALEALAHMSVQR 321 >gi|86147820|ref|ZP_01066126.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222] gi|85834347|gb|EAQ52499.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222] Length = 323 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 135/319 (42%), Positives = 194/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L L +A L Y+G Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 EAHITSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S LE +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TTLGSLRILELMSESVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILTESTPEIETAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + + I +E L +M+E +L T +AY KA L L Sbjct: 244 MRNGSPDQASMIREAIEKAN-GMERLDDIMSVMKETGSLEYTTNKAYEEADKAIAELSIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L + ++R Sbjct: 303 PESEYKQALTTLAHLAVKR 321 >gi|330823512|ref|YP_004386815.1| trans-hexaprenyltranstransferase [Alicycliphilus denitrificans K601] gi|329308884|gb|AEB83299.1| Trans-hexaprenyltranstransferase [Alicycliphilus denitrificans K601] Length = 349 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 135/302 (44%), Positives = 192/302 (63%), Gaps = 2/302 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +V+ +I R+ S V ++ V +Y+I +GGKRLRP L L T LEY+G+ Sbjct: 36 LIADDMREVDKVIAARLQSSVPLVGSVAQYIISAGGKRLRPALLLLTCGALEYKGEQRFN 95 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E S Sbjct: 96 LAAVVEFIHTATLLHDDVVDESTLRRGRPTANEAFGNPASVLVGDFLHTRSFQMMVEAGS 155 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ L+ +AEGE++QL + + + E YLHVI+SKTA LF A+ +++++AG Sbjct: 156 MRILQVLADATNVIAEGEVQQLMNTHDASLDEAGYLHVIRSKTAKLFEASARLAAILAGS 215 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QA YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I+A QRG+ Sbjct: 216 TPDIEQACADYGQALGTAFQVIDDVLDYDGDAQEMGKNLGDDLREGKVTLPLIIAMQRGS 275 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + ++ ++ I G S + L+ I+RE AL T A + + A D+ LP + + Sbjct: 276 QAQRELLRNVIETG--SADELQPVIAIIRETGALTATRDAAAAQARLAMDAAAKLPANPY 333 Query: 307 KK 308 K Sbjct: 334 TK 335 >gi|293393170|ref|ZP_06637485.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582] gi|291424316|gb|EFE97530.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582] Length = 381 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ S+V +I + Y+I GGKR+RPM+ + A L+Y+ Sbjct: 61 LEQITELTAQDMAAVNATILEQLNSEVTLINQLGYYIISGGGKRIRPMIAVLAARALQYQ 120 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 121 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 180 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 181 MTSLESLRVLALMSEAVNVIAEGEVLQLMNVHDPDITEESYMRVIYSKTARLFEAAAQSS 240 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G + Q L+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 241 AILSGATEAQEQGLQDYGRYLGTAFQLIDDLLDYSADGVTLGKNTGDDLNEGKPTLPLLH 300 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G ++ + I G L+ M + +L T RA KA +L Sbjct: 301 AMHHGNAQQTAMIRGAIEQGN-GRHLLEPVLTAMEQCGSLSYTRQRAEEEADKAIAALHV 359 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + +QR Sbjct: 360 LPQSPFRDALEGLAHLAVQR 379 >gi|170723659|ref|YP_001751347.1| polyprenyl synthetase [Pseudomonas putida W619] gi|169761662|gb|ACA74978.1| Polyprenyl synthetase [Pseudomonas putida W619] Length = 322 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 129/312 (41%), Positives = 197/312 (63%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ +EE Y+ VI+ KTA+LF A+ ++ +AG + Sbjct: 133 QILSKATRVIAEGEVLQLSRVRDASTSEEVYMEVIRGKTAMLFEASTHSAAALAGATDEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 REALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYTMREGTPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L++ + + + AL T A Y ++A + L LP S ++ +L Sbjct: 253 ALVRKAIQKG--GLEDLEQIRVAVEASGALDYTAQLARDYVKRAIECLEVLPASQYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|33151879|ref|NP_873232.1| octaprenyl pyrophosphate synthetase [Haemophilus ducreyi 35000HP] gi|33148100|gb|AAP95621.1| octaprenyl-diphosphate synthase [Haemophilus ducreyi 35000HP] Length = 327 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 131/320 (40%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L Y Sbjct: 7 LEQIQALAQQDMQAVDQEILAQLNSEVPLINQLGHYIISGGGKRIRPLIAVLAANALCYT 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ A IEF+HTATLLHDDVVD+SALRRG+ A ++GN SVLVGDF+ +++F M Sbjct: 67 GRKHLTCAAFIEFVHTATLLHDDVVDESALRRGRETANAIFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S E L+ +S LAEGE++QL + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTSVDSLEVLKVMSAATNALAEGEVQQLMNINDPHTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + QALK+YG LG AFQLVDD+LDY + + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGASQQIEQALKAYGCYLGTAFQLVDDILDYSAKAEQFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q + + + + I G + + IM E+++L RA QKA +L Sbjct: 247 ALQHANEAQASMIREAIEHGGERAK-IPMVLAIMAEHKSLEYAMARAKQEAQKAVAALDI 305 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L D+ +KK+L+ + + R Sbjct: 306 LADTEYKKALISLAYLSVDR 325 >gi|319761641|ref|YP_004125578.1| polyprenyl synthetase [Alicycliphilus denitrificans BC] gi|317116202|gb|ADU98690.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC] Length = 349 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 135/303 (44%), Positives = 192/303 (63%), Gaps = 2/303 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +V+ +I R+ S V ++ V +Y+I +GGKRLRP L L T LEY+G+ Sbjct: 36 LIADDMREVDKVIAARLQSSVPLVGSVAQYIISAGGKRLRPALLLLTCGALEYKGEQRFN 95 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E S Sbjct: 96 LAAVVEFIHTATLLHDDVVDESTLRRGRPTANEAFGNPASVLVGDFLHTRSFQMMVEAGS 155 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ L+ +AEGE++QL + + + E YLHVI+SKTA LF A+ +++++AG Sbjct: 156 MRILQVLADATNVIAEGEVQQLMNTHDASLDEAGYLHVIRSKTAKLFEASARLAAILAGS 215 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QA YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I+A QRG+ Sbjct: 216 TPDIEQACADYGQALGTAFQVIDDVLDYDGDAQEMGKNLGDDLREGKVTLPLIIAMQRGS 275 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + ++ ++ I G S + L+ I+RE AL T A + + A D+ LP + + Sbjct: 276 QAQRELLRNVIETG--SADELQPVIAIIRETGALTATRDAAAAQARLAMDAAAKLPANPY 333 Query: 307 KKS 309 K Sbjct: 334 TKG 336 >gi|269964673|ref|ZP_06178911.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B] gi|269830572|gb|EEZ84793.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B] Length = 323 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 131/319 (41%), Positives = 195/319 (61%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ + Sbjct: 124 TELGSMKILKLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPEHVEIAMQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T + I ++ L++ +M+E +L T +A KA L L Sbjct: 244 MRNTTPENAIMIREAIEKAN-GMDRLEEILAVMKEAGSLEYTTQKALEEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + +QR Sbjct: 303 PESEYKQALVTLAHVAVQR 321 >gi|262392448|ref|YP_003284302.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] gi|262336042|gb|ACY49837.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] Length = 323 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 131/319 (41%), Positives = 195/319 (61%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ + Sbjct: 124 TELGSMKILKLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPEHVEIAMQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T + I ++ L+ +M+E +L T +A KA + L L Sbjct: 244 MRNTTPDNALMIREAIEKAN-GMDRLEDILAVMKEAGSLEYTTQKALEEADKAIEELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + +QR Sbjct: 303 PESEYKQALITLAHVAVQR 321 >gi|30249867|ref|NP_841937.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] gi|30180904|emb|CAD85826.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] Length = 322 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 135/321 (42%), Positives = 204/321 (63%), Gaps = 4/321 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + ++ KDM +V+ +I +++ S V ++ V +Y+I SGGKRLRP L + A + +Y+ Sbjct: 3 IESIRNVIAKDMGEVDNVIQQKLHSQVALVRQVSEYIIHSGGKRLRPALVILAAGLFDYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA +EFIHTATLLHDDVVD+S LRR + A ++GN SVLVGDFL S+AF M Sbjct: 63 GLHHHNLAAVVEFIHTATLLHDDVVDESELRRNQATANALFGNAASVLVGDFLYSRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + +E L+ T+AEGE+ QL ++ DV EE+YL VI+ KTA LF AA + Sbjct: 123 MVEVGNMRVMEVLADATNTIAEGEVLQLLNCRDPDVEEENYLQVIRFKTAKLFEAAARLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G + +AL +YGM+LG AFQLVDD+LDY G + GKN+G+D GKPTLP+I Sbjct: 183 AILGGATPAEEEALAAYGMHLGTAFQLVDDLLDYSGNDQDTGKNLGDDLAEGKPTLPLIF 242 Query: 241 AFQRGTKREKNFWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + G + + + I GK E + K I++E+ AL + A + A ++ Sbjct: 243 AMRSGIPEQVDTVRHAIETGGKDGFEPILK---IIQESGALDYAKQCAQNEANMAISAIT 299 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 + DS +K+ L+E+ +F + R Sbjct: 300 AIRDSIYKQCLLELAEFAITR 320 >gi|294634497|ref|ZP_06713032.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685] gi|291092011|gb|EFE24572.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685] Length = 323 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEKITELTAQDMADVNAKILHQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALHYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDRHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S LE +S +AEGE+ QL + D++EE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLQSLRILELMSAATNVIAEGEVMQLMNVNDPDISEENYMQVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAGADTHQELALQDYGRYLGTAFQLIDDLLDYDADGATLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G+ + I G L M++ +L T RA KA +L Sbjct: 243 AMRHGSPERSAMIRQAIEQGN-GRHLLDPVLETMQQVGSLDYTRRRAEEEADKAIAALAV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L DS +K++L+ + + + R Sbjct: 302 LDDSPYKQALIGLANLSVNR 321 >gi|332308087|ref|YP_004435938.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175416|gb|AEE24670.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 323 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 132/315 (41%), Positives = 197/315 (62%), Gaps = 1/315 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN LI K++ SDV +I + Y++ SGGKRLRP+LT+ A L + + H Sbjct: 9 LAEPDMLAVNQLIQKQVNSDVSLINQLGFYIVNSGGKRLRPLLTVLAARALNIQTEQHHT 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IEFIHTATLLHDDVVD+S +RRG+ A V+GNQ SVLVGDFL +++F M++ S Sbjct: 69 LAAIIEFIHTATLLHDDVVDESTMRRGRETANEVFGNQASVLVGDFLYTRSFQMMVTLDS 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ LS +AEGE+ QL + + TEE Y+ VI SKTA LF AA +++++ Sbjct: 129 MRVMQILSDATNVIAEGEVLQLMNCNDPNTTEESYMEVIYSKTARLFEAATLLAAVLTKQ 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ A++ YG LG AFQLVDD++DY + +MGKN+G+D GKPTLP++ A G Sbjct: 189 SEAIENAMQDYGKYLGTAFQLVDDIMDYASDSEDMGKNMGDDLAEGKPTLPLLYAMWHGN 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +++ + I G ++NL M + AL T+++A Q+A D+L +P+S + Sbjct: 249 EQQAAMIREAIESGN-GMDNLTLILEAMEQTNALGYTKHQALKASQQAVDALAPIPESHY 307 Query: 307 KKSLMEVVDFCLQRL 321 K++L+ + ++R+ Sbjct: 308 KQALIGLAHVAVERV 322 >gi|301154821|emb|CBW14284.1| octaprenyl diphosphate synthase [Haemophilus parainfluenzae T3T1] Length = 331 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 131/320 (40%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M ++ LT DM+KVN IL +I SDV M+ + Y++ GGKR+RP++ + A L Y Sbjct: 11 MHAIQALTDADMQKVNQAILAQINSDVPMVNQLGFYIVQGGGKRIRPLIAVLAARALGYE 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 71 SDKVATCATFVEFIHTASLLHDDVVDESDMRRGRATANSAFGNAASVLVGDFIYTRAFQL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + +S + L ++ LAEGE++QL + D TEE Y+ VI SKTA LF A + Sbjct: 131 VAQLQSLDILRIMADATNVLAEGEVQQLMNVNDPDTTEESYMRVIYSKTARLFEVAAQSV 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + S+ A + YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ Sbjct: 191 AIVAGAEKSIETAFQEYGRYLGTAFQLVDDVLDYSANAAALGKNVGDDLAEGKPTLPLLH 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G ++ + I G + + + IM E+++L RA QKA D+++ Sbjct: 251 AMRHGNPQQAALIREAIEQGG-KRDAIDEVLAIMAEHKSLDYAMDRAKQEAQKAVDAIQI 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 310 LPESEYKQALISLAYLSVSR 329 >gi|238898823|ref|YP_002924505.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466582|gb|ACQ68356.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 310 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 129/309 (41%), Positives = 196/309 (63%), Gaps = 1/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M +N +I+ ++ SD+E++ + Y+I GGKR+RPM+++ +A L Y+GD H+++A I Sbjct: 1 MAALNVIIIDQMHSDIELVNQLSAYIINGGGKRIRPMISILSARALNYKGDQHIIVAALI 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD S LRRGK A V+GN SVLVGDF+ ++AF M+ + S L+ Sbjct: 61 EFIHTATLLHDDVVDKSDLRRGKKTANTVFGNSASVLVGDFIYTRAFQMMTDLGSMRILK 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +S ++EGE++QL N+++TE DY+ VI SKTA LF AA + ++++A Sbjct: 121 VMSSATNVISEGEVQQLMYCNNVNITEYDYMKVIYSKTARLFEAASQSAAILAKASPEQE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 AL+SYG LG +QL+DD+LDY + N GK+IG+D GK TLP++ A GT+ +K Sbjct: 181 SALQSYGCYLGTTYQLIDDLLDYNSKGNLFGKDIGDDLDEGKATLPLLHAMHHGTEEQKQ 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 I G + ++L + IM++ +L T RA KA +L+ LP +S++ +L Sbjct: 241 MISFAIKRGN-ARQSLPQILNIMKQCGSLGYTLNRAKEEANKAISALQILPKNSYRTALE 299 Query: 312 EVVDFCLQR 320 + F ++R Sbjct: 300 SLAYFAVKR 308 >gi|315181275|gb|ADT88189.1| octaprenyl-diphosphate synthase [Vibrio furnissii NCTC 11218] Length = 396 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 131/319 (41%), Positives = 191/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 77 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAVLSAKALGYQG 136 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 H L A IEF HTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 137 QGHTLAAAFIEFTHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMM 196 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 197 VELGSMKILQLMSEAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 256 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A + AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 257 ILADASPEIETALQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 316 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G + + I + L + M+E +L T +A KA L L Sbjct: 317 MRHGNAEQAAMIREAIEQAN-GMARLDEILAAMKETGSLEYTVAKANEEADKAITELAIL 375 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 376 PESDYKQALIALAHMAVNR 394 >gi|163749221|ref|ZP_02156471.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99] gi|161331291|gb|EDQ02180.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99] Length = 323 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI ++ SDV +I + Y+I GGKR+RP+L++ A ++Y+ Sbjct: 3 LNAIRQLADSDMQDVNKLIYAQLESDVALINQLGFYIINGGGKRMRPLLSILAARAIDYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ LA +EFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GVAHLKLAAIVEFIHTASLLHDDVVDESMLRRGRDTANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S + L+ L+ LAEGE+ QL + D +EE Y+ VI KTA LF AA ++ Sbjct: 123 MTELGSMKVLKMLADATNVLAEGEVLQLMNCNDPDTSEESYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A ++ AL YG LG AFQL DD+LDY E+GKNIG+D GKPTLP+I Sbjct: 183 GVLADSPIEIQTALADYGKYLGTAFQLTDDLLDYTANTEELGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT++E+ + + G +N+++ + + AL T RA KA +L C Sbjct: 243 AIAHGTEKEQALIRKAVELGD-GTQNIEEILVALNNCGALKYTHDRALEESDKAVAALAC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDS +K++L+ + ++R Sbjct: 302 IPDSEYKQALISLAKIAVER 321 >gi|332289056|ref|YP_004419908.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179] gi|330431952|gb|AEC17011.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179] Length = 323 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 133/317 (41%), Positives = 199/317 (62%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L+ KDM+ VN +I +++ SDV +I + Y+I GGKR+RP++ + A L Y+GD Sbjct: 6 IQALSAKDMQAVNAMISQQLQSDVALINQLSFYIINGGGKRIRPLIAVLVANALNYQGDR 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ A IEFIHTATLLHDDVVD+S LRRGK A ++GN SVLVGDF+ ++AF ++ Sbjct: 66 HITCATFIEFIHTATLLHDDVVDESTLRRGKDTANAIFGNAASVLVGDFIYTRAFQLMAR 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S ++ +S +A GE+ QL + D TE+ Y+ VI SKTA LF A E S+L+ Sbjct: 126 LGSLPVMQVMSDAVNVIAAGEVLQLMNCNDPDTTEQSYMQVIYSKTARLFEVAAECSALL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + QA+K YG LG AFQL+DDVLDY +V+++GKN+G+D GKPTLP++ A Q Sbjct: 186 SEATEQQVQAMKLYGRYLGTAFQLIDDVLDYCADVDKLGKNLGDDLEEGKPTLPLLHAMQ 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 ++ E+ +S I G + L + +M + ++L T +A QKA DSL + D Sbjct: 246 HASEDERQLIRSIIEHGH-GRKYLAEVQAMMDKYQSLTYTIEKAKQEAQKAIDSLSVIDD 304 Query: 304 SSWKKSLMEVVDFCLQR 320 + +K++L+ + ++R Sbjct: 305 NPYKEALISLAKISVER 321 >gi|332526525|ref|ZP_08402637.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2] gi|332110793|gb|EGJ10970.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2] Length = 313 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 130/311 (41%), Positives = 195/311 (62%), Gaps = 5/311 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M +V+ ++ R+ S V +I + Y+I +GGKR+RP L L + L +RG LA + Sbjct: 5 MRQVDAVLRARLSSKVALIDQIASYIISAGGKRMRPRLLLLFSEALGFRGPERYELAAVV 64 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHT+TLLHDDVVD+S+LRRG+ A ++GN +VLVGDFL S++F M++ KS LE Sbjct: 65 ELIHTSTLLHDDVVDESSLRRGRATANSMFGNAAAVLVGDFLYSRSFQMMVSVKSMRVLE 124 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ +AEGE+ QL + D+ ++YL VI+ KTA LF A+ + +++AG V Sbjct: 125 VLAEATNVIAEGEVLQLMNMHDADLAVDEYLRVIRFKTAKLFEASARLGAVLAGASAEVE 184 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A YG +LG AFQLVDD+LDY G +E+GKN+G+D R GKPTLP+++A +RGT E+ Sbjct: 185 EACADYGRSLGTAFQLVDDLLDYEGNASELGKNVGDDLREGKPTLPLLIAMERGTAEERE 244 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G++ E L++ I+R AL T A + A+ +L LP S +++L+ Sbjct: 245 LIRHAIEHGEL--ERLQQIIDIVRRTGALEATREAAQAQADIARATLELLPVSKAREALL 302 Query: 312 EVVDFCLQRLN 322 E FC + ++ Sbjct: 303 E---FCFRAVH 310 >gi|238750110|ref|ZP_04611613.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380] gi|238711654|gb|EEQ03869.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380] Length = 323 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 132/316 (41%), Positives = 194/316 (61%), Gaps = 1/316 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+G+ H+ Sbjct: 8 ELTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAILVARALNYQGNKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ + Sbjct: 68 TVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMMTSLE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + ++++A Sbjct: 128 SLRVLTLMSDATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSAAVLAN 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ A + G Sbjct: 188 ASEEQEVALQNYGRYLGTAFQLIDDLLDYSSDGVTLGKNTGDDLNEGKPTLPLLHAMRNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + + I G L+ M++ ++L T RA + KA SL+ LP+S+ Sbjct: 248 TPEQAAMIRQAIEQGN-GRHLLEPVLFAMQQCKSLDYTRQRAEAEADKAIASLQILPESN 306 Query: 306 WKKSLMEVVDFCLQRL 321 ++++L + +QR+ Sbjct: 307 YRQALEGLAHIAVQRV 322 >gi|325577651|ref|ZP_08147926.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC 33392] gi|325160396|gb|EGC72522.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC 33392] Length = 331 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 131/320 (40%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M ++ LT DM+KVN IL +I SDV M+ + Y++ GGKR+RP++ + A L Y Sbjct: 11 MHAIQALTDADMQKVNQAILAQINSDVPMVNQLGFYIVQGGGKRIRPLIAVLAARALGYE 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 71 SDKVATCATFVEFIHTASLLHDDVVDESDMRRGRATANSAFGNAASVLVGDFIYTRAFQL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + +S + L ++ LAEGE++QL + D TEE Y+ VI SKTA LF A + Sbjct: 131 VAQLQSLDILRIMADATNVLAEGEVQQLMNVNDPDTTEESYMRVIYSKTARLFEVAAQSV 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + S+ A + YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ Sbjct: 191 AIVAGAEKSIETAFQEYGRYLGTAFQLVDDVLDYSANAAALGKNVGDDLAEGKPTLPLLH 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G ++ + I G + + + IM E+++L RA QKA D+++ Sbjct: 251 AMRHGNPQQAALIREAIEQGG-KRDAIDEVLAIMAEHKSLDYAMDRAKQEAQKAIDAIQI 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 310 LPESEYKQALISLAYLSVSR 329 >gi|170725365|ref|YP_001759391.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908] gi|169810712|gb|ACA85296.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908] Length = 323 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKR+RP+L++ A ++Y Sbjct: 3 LNAIRQLADNDMQNVNKLIYKQLESDVALINQLGFYIINGGGKRMRPLLSILAARAVDYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GEAHLKLAAIIEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S E LE L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++ Sbjct: 123 MTELGSMEVLEVLADATNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A ++ AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 183 GVLADSPKEIQVALADYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G++ E+ ++ I G +++ + AL T RA +KA +L Sbjct: 243 AIAHGSETEQTLIRTAIEKGD-GTDSIDPILAALDNCGALEYTYKRAQEEAEKAIGALSI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 302 LPESDYKQALISLAKIAVAR 321 >gi|156973119|ref|YP_001444026.1| octaprenyl-diphosphate synthase [Vibrio harveyi ATCC BAA-1116] gi|156524713|gb|ABU69799.1| hypothetical protein VIBHAR_00798 [Vibrio harveyi ATCC BAA-1116] Length = 323 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 131/319 (41%), Positives = 195/319 (61%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ +V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPENVEVALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T + I ++ L+ +M+E +L T +A KA L L Sbjct: 244 MRNTTPENTAMIREAIEKAN-GMDRLEDILAVMQEAGSLEYTTQKALEEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + ++R Sbjct: 303 PESDYKQALVTLAHMAVKR 321 >gi|238787578|ref|ZP_04631376.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641] gi|238724365|gb|EEQ16007.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641] Length = 323 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 132/315 (41%), Positives = 190/315 (60%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+G+ H+ Sbjct: 8 ELTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALNYQGNKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ + Sbjct: 68 TVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMMTSLE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L ++ +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + ++++A Sbjct: 128 SLRVLTLMAAATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSAAVLAD 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ A G Sbjct: 188 ASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLHAMHNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + + I G L+ + M++ +L T RA KA SL+ LPDS Sbjct: 248 TPEQTAMIRQAIEQGN-GRHLLEPVLLAMQQCGSLDYTRQRAEEEADKAIASLQILPDSD 306 Query: 306 WKKSLMEVVDFCLQR 320 ++++L + +QR Sbjct: 307 YRQALEGLAHIAVQR 321 >gi|28897101|ref|NP_796706.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD 2210633] gi|28805310|dbj|BAC58590.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD 2210633] Length = 333 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 132/319 (41%), Positives = 193/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 14 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 73 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 74 TGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 133 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ + Sbjct: 134 TELGSMKILQLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 193 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 194 ILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 253 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T + I +E L + +M+E +L T +A KA L L Sbjct: 254 MRNTTPENALMIREAIEKAN-GMERLDEILAVMKEAGSLEYTTQKALEEADKAIAELEVL 312 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + ++R Sbjct: 313 PESEYKEALITLAHVAVKR 331 >gi|322831197|ref|YP_004211224.1| Polyprenyl synthetase [Rahnella sp. Y9602] gi|321166398|gb|ADW72097.1| Polyprenyl synthetase [Rahnella sp. Y9602] Length = 323 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 133/315 (42%), Positives = 190/315 (60%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DLT DM VN IL+++ S+V +I + Y+I GGKR+RPM+ + A L Y+GD H+ Sbjct: 8 DLTQDDMAAVNASILEQLNSEVSLINQLGYYIISGGGKRIRPMIAVLAAKALSYQGDKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+ + + Sbjct: 68 KVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTDLE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L ++ +AEGE++QL + D+TE Y+ VI SKTA LF AA + S+++AG Sbjct: 128 SLPVLALMAKAVNVIAEGEVQQLINCNDPDITEASYMQVIYSKTARLFEAASQASAMLAG 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 N AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ A Q G Sbjct: 188 GNNEQITALQDYGRYLGTAFQLIDDLLDYDADGETLGKNTGDDLDEGKPTLPLLHAMQHG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + + I +G L+ M + +L T RA KA +L+ LP+S Sbjct: 248 DAEQSAMIRKAIEEGN-GRHLLEPVLAAMHQWGSLAYTRQRAEEEADKAIQALQVLPESE 306 Query: 306 WKKSLMEVVDFCLQR 320 ++ +L + ++R Sbjct: 307 YRSALEGLAHMSVKR 321 >gi|260878015|ref|ZP_05890370.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034] gi|260896382|ref|ZP_05904878.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466] gi|308085175|gb|EFO34870.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466] gi|308090006|gb|EFO39701.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034] gi|328471899|gb|EGF42776.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 10329] Length = 323 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 132/319 (41%), Positives = 193/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 TGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ + Sbjct: 124 TELGSMKILQLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T + I +E L + +M+E +L T +A KA L L Sbjct: 244 MRNTTPENALMIREAIEKAN-GMERLDEILAVMKEAGSLEYTTQKALEEADKAIAELEVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + ++R Sbjct: 303 PESEYKEALITLAHVAVKR 321 >gi|26987423|ref|NP_742848.1| polyprenyl synthetase [Pseudomonas putida KT2440] gi|24982082|gb|AAN66312.1|AE016259_10 octylprenyl diphosphate synthase [Pseudomonas putida KT2440] Length = 322 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 130/312 (41%), Positives = 196/312 (62%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ +A + Sbjct: 133 QILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 REALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYTMREGTAEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L++ + + E+ AL T A Y ++A L LP S ++ +L Sbjct: 253 ALVRQAIQKG--GLEDLEQIRVAVEESGALKYTAELARDYVKRAIACLEVLPASEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|313497049|gb|ADR58415.1| IspB [Pseudomonas putida BIRD-1] Length = 322 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 130/312 (41%), Positives = 196/312 (62%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ +A + Sbjct: 133 QILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 REALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYTMREGTTEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L++ + + E+ AL T A Y ++A L LP S ++ +L Sbjct: 253 ALVRQAIQKG--GLEDLEQIRVAVEESGALKYTAELARDYVKRAIACLEVLPASEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|328676037|gb|AEB28712.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida 3523] Length = 325 Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 135/326 (41%), Positives = 202/326 (61%), Gaps = 8/326 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIIDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EEDY+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEDYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQNS---VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + S + +++YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQSYAKYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKD 296 I ++++ K I +G+ +++ + I M +N VD Y+ A Y AK Sbjct: 244 TIYTLANVNQQQQQILKKAIENGEYAIDEI----IAMVKNSGAVDYSYKIACQYADLAKQ 299 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D ++R N Sbjct: 300 QIDFLPDSEYKQAMILLCDLAVKRKN 325 >gi|259907026|ref|YP_002647382.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96] gi|224962648|emb|CAX54103.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96] gi|283476821|emb|CAY72659.1| octaprenyl diphosphate synthase [Erwinia pyrifoliae DSM 12163] Length = 324 Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 135/321 (42%), Positives = 193/321 (60%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEY 59 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ LA + +Y Sbjct: 3 LEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAINDY 62 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF Sbjct: 63 AGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 122 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + Sbjct: 123 MMTSLGSLKVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQS 182 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+++AG + QAL+ YG +G AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 SAILAGASEAEEQALQDYGRYIGTAFQLIDDLLDYSADGETLGKNVGDDLSEGKPTLPLL 242 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + GT + + +S I +G L+ M + +L T A KA +L Sbjct: 243 HAMRNGTPEQASMIRSAIEEGN-GRHLLESVLETMNQCGSLGWTRNAAEKEADKAIAALE 301 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP S W+ +L + +QR Sbjct: 302 VLPKSPWRTALEALAHMSVQR 322 >gi|297580574|ref|ZP_06942500.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385] gi|297534990|gb|EFH73825.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385] Length = 348 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 88 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 268 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 269 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAAL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 328 PESEYKQALITLAHMAVNR 346 >gi|148545964|ref|YP_001266066.1| polyprenyl synthetase [Pseudomonas putida F1] gi|148510022|gb|ABQ76882.1| Polyprenyl synthetase [Pseudomonas putida F1] Length = 322 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 130/312 (41%), Positives = 196/312 (62%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ +A + Sbjct: 133 QILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 REALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYTMREGTAEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L++ + + E+ AL T A Y ++A L LP S ++ +L Sbjct: 253 ALVRQAIQKG--GLEDLEQIRVAVEESGALHYTAELARDYVKRAIACLEVLPASEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|229525127|ref|ZP_04414532.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|229338708|gb|EEO03725.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|327483290|gb|AEA77697.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4] Length = 323 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 244 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 303 PESEYKQALITLAHMAVNR 321 >gi|167031734|ref|YP_001666965.1| polyprenyl synthetase [Pseudomonas putida GB-1] gi|166858222|gb|ABY96629.1| Polyprenyl synthetase [Pseudomonas putida GB-1] Length = 322 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 130/312 (41%), Positives = 196/312 (62%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ +A + Sbjct: 133 QILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAAALAEATDEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 REALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYTMREGTAEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L++ + + E+ AL T A Y ++A L LP S ++ +L Sbjct: 253 ALVRQAIQKG--GLEDLEQIRVAVEESGALKYTAELARDYVKRAIACLEVLPASEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|127511802|ref|YP_001092999.1| trans-hexaprenyltranstransferase [Shewanella loihica PV-4] gi|126637097|gb|ABO22740.1| Trans-hexaprenyltranstransferase [Shewanella loihica PV-4] Length = 323 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 135/310 (43%), Positives = 191/310 (61%), Gaps = 1/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ V+ LI K++ SDV +I + Y+I GGKR+RP+L++ A + Y G+ H+ LA Sbjct: 13 DMKAVDQLIYKQLESDVALINQLGFYIINGGGKRMRPLLSILAARAIAYEGEAHLKLAAI 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M+ E KS E L Sbjct: 73 VEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELKSMEVL 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E L+ LAEGE+ QL + D +EE Y+ VI KTA LF AA ++ ++A V Sbjct: 133 EVLADATNVLAEGEVLQLMNCNDPDTSEESYMRVIYCKTAKLFEAATRLAGVLAESSIEV 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + AL YG LG AFQL DD+LDY + +GKNIG+D GKPTLP+I A G + E+ Sbjct: 193 QTALADYGKYLGTAFQLTDDLLDYTADTEALGKNIGDDLAEGKPTLPLIYAIANGNELER 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G E++ +++ AL TE RA +KA +L +PDS +K++L Sbjct: 253 QLIRDAIEKGD-GTEHIDTILNALKQCGALDYTEKRAREEAEKAIRALDLIPDSDYKQAL 311 Query: 311 MEVVDFCLQR 320 + + + R Sbjct: 312 ISLARIAVAR 321 >gi|229507073|ref|ZP_04396579.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|229508772|ref|ZP_04398264.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229519759|ref|ZP_04409202.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229519996|ref|ZP_04409425.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] gi|229530278|ref|ZP_04419666.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] gi|229606271|ref|YP_002876919.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|255743817|ref|ZP_05417774.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262167602|ref|ZP_06035306.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] gi|229332051|gb|EEN97539.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] gi|229342945|gb|EEO07934.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] gi|229344448|gb|EEO09423.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229354175|gb|EEO19106.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229355818|gb|EEO20738.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|229368926|gb|ACQ59349.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|255738566|gb|EET93954.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262023938|gb|EEY42635.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] Length = 323 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 244 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 303 PESEYKQALITLAHMAVNR 321 >gi|262275074|ref|ZP_06052885.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] gi|262221637|gb|EEY72951.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] Length = 323 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 131/317 (41%), Positives = 193/317 (60%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ LT DM KV+ IL ++ SDV +I + Y++ GGKRLRPML + + L Y+G+ Sbjct: 6 IQALTADDMAKVDQKILAQLNSDVALINQLGFYIVSGGGKRLRPMLAVLSGRALGYQGEG 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ A IEFIHTATLLHDDVVD+S LRRGK A ++GN SVLVGD++ +++F M+ E Sbjct: 66 HITAAAFIEFIHTATLLHDDVVDESDLRRGKATANAMFGNAASVLVGDYIYTRSFQMMTE 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S L+ +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ +++ Sbjct: 126 LRSLRILDLMSKATNVIAEGEVLQLMNCNDPNTTEESYMQVIYSKTARLFEAATQIGAIL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + A++ YG LG AFQL+DDV+DY + +EMGKN G+D GKPTLP++ A Sbjct: 186 ADASEEIETAMQDYGRYLGTAFQLIDDVMDYTSQGDEMGKNTGDDLAEGKPTLPLLHAMA 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 GT + + I G ++ L + M +L T RA KA ++L +P+ Sbjct: 246 NGTPEQAAMIREAIEQGN-GLDKLAQILACMEACGSLEYTRQRAEDEADKAINALAPIPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L + ++R Sbjct: 305 SEYKEALKALAHIAVRR 321 >gi|167856324|ref|ZP_02479054.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755] gi|167852554|gb|EDS23838.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755] Length = 327 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 129/314 (41%), Positives = 195/314 (62%), Gaps = 1/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM+ V+ IL ++ SDV +I + Y+I GGKR+RP++ + A + Y+G H+ Sbjct: 13 LVKADMQAVDQAILAQLNSDVVLINQLGHYIISGGGKRIRPLIAVLAANTVGYKGQEHIT 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 A +EFIHTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF M+ +S Sbjct: 73 CAAFVEFIHTATLLHDDVVDESDMRRGRETANARFGNAASVLVGDFIYTRAFQMMASLRS 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ +S +AEGE++QL + + TE +Y+ VI SKTA LF AA + S++++G Sbjct: 133 LDVLQVMSDATNVIAEGEVQQLMNVNDPETTEANYMQVIYSKTARLFEAASQCSAIVSGA 192 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + A++ YG LG AFQLVDD+LDY ++GKNIG+D GKPTLP++ A + G Sbjct: 193 DQATVIAMRDYGRYLGTAFQLVDDILDYSANAEQLGKNIGDDLAEGKPTLPLLHAMRSGN 252 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +++ + I G E L + IM E+++L T RA QKA D++ LP+S + Sbjct: 253 RQQAALIREAIEQGG-KREALDEILAIMAEHKSLDYTMERAKQEAQKAVDAIAILPESEY 311 Query: 307 KKSLMEVVDFCLQR 320 K++L+ + + R Sbjct: 312 KQALISLAYLSVDR 325 >gi|329297304|ref|ZP_08254640.1| polyprenyl synthetase [Plautia stali symbiont] Length = 323 Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGK +RPM+ + +A L Y+ Sbjct: 3 LEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISGGGKHIRPMIAVLSARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GSLHVTNAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSMGSLKILALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAASQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAEATPAQEKALQDYGRYLGTAFQLIDDLLDYSADGETLGKNTGDDLSEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I +G L+ M++ +L T RA KA +L+ Sbjct: 243 AMHNGTPEQAQMIRKAIEEGN-GRHLLEPVLAAMQQTGSLEWTRKRAEEEADKAIAALQA 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ W+ +L + +QR Sbjct: 302 LPETPWRSALEALAHMSVQR 321 >gi|254225991|ref|ZP_04919591.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51] gi|254291338|ref|ZP_04962132.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226] gi|125621447|gb|EAZ49781.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51] gi|150422794|gb|EDN14747.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226] Length = 348 Score = 251 bits (642), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 88 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 268 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 269 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAVL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 328 PESEYKQALITLAHMAVNR 346 >gi|17547542|ref|NP_520944.1| octaprenyl-diphosphate synthase [Ralstonia solanacearum GMI1000] gi|17429846|emb|CAD16530.1| probable octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum GMI1000] Length = 322 Score = 251 bits (642), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 133/311 (42%), Positives = 194/311 (62%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG +H LA Sbjct: 12 EDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGQHHYELAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 72 VVEFIHTATLLHDDVVDESELRRGRQTANAVFGNAASVLVGDFLYSRAFQMMVQADSMRV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G + Sbjct: 132 MQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAA 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ + Sbjct: 192 TEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIYLLSHGTETQ 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + I G E+ F ++ + AL T A A +++ LP S ++++ Sbjct: 252 RALARQAIEQG--GTEHFDAIFAAIQASGALEYTRKAAEHEASAAAEAIIALPPSQFRQT 309 Query: 310 LMEVVDFCLQR 320 L+E+ F LQR Sbjct: 310 LIELCAFSLQR 320 >gi|229512636|ref|ZP_04402105.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] gi|229350313|gb|EEO15264.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] Length = 323 Score = 251 bits (642), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 244 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQYEADKAIAELAVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 303 PESEYKQALITLAHMAVNR 321 >gi|15640461|ref|NP_230088.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590773|ref|ZP_01678102.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80] gi|121727265|ref|ZP_01680424.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52] gi|147674613|ref|YP_001218702.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395] gi|153819559|ref|ZP_01972226.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457] gi|153822596|ref|ZP_01975263.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33] gi|153830825|ref|ZP_01983492.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39] gi|227080645|ref|YP_002809196.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2] gi|254850665|ref|ZP_05240015.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10] gi|298501034|ref|ZP_07010835.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757] gi|9654858|gb|AAF93607.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547375|gb|EAX57489.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80] gi|121630384|gb|EAX62779.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52] gi|126509895|gb|EAZ72489.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457] gi|126519900|gb|EAZ77123.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33] gi|146316496|gb|ABQ21035.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395] gi|148873684|gb|EDL71819.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39] gi|227008533|gb|ACP04745.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2] gi|227012288|gb|ACP08498.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395] gi|254846370|gb|EET24784.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10] gi|297540282|gb|EFH76342.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757] Length = 348 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 88 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 268 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 269 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAIL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 328 PESEYKQALITLAHMAVNR 346 >gi|262164113|ref|ZP_06031852.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] gi|262027641|gb|EEY46307.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] Length = 323 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 134/319 (42%), Positives = 189/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 NH A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 SNHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 244 MQHGNPEQVLMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQHEADKAIAELAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 303 PESEYKQALITLAHMAVNR 321 >gi|82702937|ref|YP_412503.1| farnesyltranstransferase [Nitrosospira multiformis ATCC 25196] gi|82411002|gb|ABB75111.1| Farnesyltranstransferase [Nitrosospira multiformis ATCC 25196] Length = 322 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 132/320 (41%), Positives = 194/320 (60%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L DM +V+ +I +++ S+V +I V +Y+I SGGKRLRP L + +A Y Sbjct: 3 IERIRSLIAPDMGRVDTVIREKLHSEVVLIRQVSEYIINSGGKRLRPALVILSAGAFGYT 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA +EFIHTATLLHDDVVD S LRR K A ++GN SVLVGDFL S+AF M Sbjct: 63 GQYHYNLAAIVEFIHTATLLHDDVVDASELRRSKATANALFGNAASVLVGDFLYSRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + + L+ T+AEGE+ QL ++ DV EE+YL VI+ KTA LF AA + Sbjct: 123 MVEVDNMRVMRVLADATNTIAEGEVLQLLNVRDPDVDEENYLRVIRYKTAKLFEAATRLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + +A+ YGM+LG AFQL DD+LDY G+ E GKN+G+D GKPTLP+I Sbjct: 183 AILGNASPAEEEAMAVYGMHLGTAFQLTDDMLDYSGDYQETGKNLGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G+ + +S I G + ++++ AL RA + + A + + Sbjct: 243 AMKTGSGAQAQIIRSAIERGGEG--GFQPVLEVIQQTGALDYARQRAQAESETASNMISS 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +K+ L+++ F + R Sbjct: 301 LPDSDYKQCLLDLSTFAVAR 320 >gi|310766238|gb|ADP11188.1| Octaprenyl diphosphate synthase [Erwinia sp. Ejp617] Length = 324 Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 135/321 (42%), Positives = 193/321 (60%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEY 59 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ LA + +Y Sbjct: 3 LEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAINDY 62 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF Sbjct: 63 AGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 122 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + Sbjct: 123 MMTSLGSLKVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQS 182 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+++AG + QAL+ YG +G AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 SAILAGASEAEEQALQDYGRYIGTAFQLIDDLLDYSADGETLGKNVGDDLSEGKPTLPLL 242 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + GT + + +S I +G L+ M + +L T A KA +L Sbjct: 243 HAMRNGTPEQASMIRSAIEEGN-GRHLLESVLETMNQCGSLEWTRNAAEKEADKAIAALG 301 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP S W+ +L + +QR Sbjct: 302 VLPKSPWRTALEALAHMSVQR 322 >gi|153802102|ref|ZP_01956688.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3] gi|124122346|gb|EAY41089.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3] Length = 348 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 88 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 268 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 269 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQYEADKAIAELAVL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 328 PESEYKQALITLAHMAVNR 346 >gi|300702983|ref|YP_003744585.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957] gi|299070646|emb|CBJ41941.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957] Length = 322 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 133/311 (42%), Positives = 196/311 (63%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG++H LA Sbjct: 12 EDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGNHHHELAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 72 VVEFIHTATLLHDDVVDESELRRGRQTANAVFGNAASVLVGDFLYSRAFQMMVQADSMRV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G + Sbjct: 132 MQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAA 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I +GT+ + Sbjct: 192 TEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIHLLSQGTEEQ 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + I G E+ F ++ + AL T A A +++ LP S ++++ Sbjct: 252 RALARQAIEQG--GTEHFDAIFSAIQTSGALEYTRKAAEREASAAAEAIIALPPSQFRQT 309 Query: 310 LMEVVDFCLQR 320 L+E+ F LQR Sbjct: 310 LIELCAFSLQR 320 >gi|308051079|ref|YP_003914645.1| trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799] gi|307633269|gb|ADN77571.1| Trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799] Length = 322 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 195/322 (60%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + DL DM+ VN +I ++ SDV +I + Y+I GGKR+RP+L + A ++Y+ Sbjct: 3 LNAIRDLADHDMKMVNQMIYDQLHSDVVLINQLSFYIINGGGKRMRPLLAVLAARAVDYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+HV LA IEFIHTATLLHDDVVD+S +RRG+ A ++GNQ SVLVGDFL +++F M Sbjct: 63 GDDHVKLAAIIEFIHTATLLHDDVVDESTMRRGRETANALFGNQASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E K LE L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++ Sbjct: 123 MTELKRPRVLEDLADATNVLAEGEVLQLMNCNDPNTTEESYMQVIYCKTARLFEAATHLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IA V AL YG LG AFQLVDDVLDY + E+GKN+G+D GKPTLP+I Sbjct: 183 AVIADQPTEVCDALSDYGRYLGTAFQLVDDVLDYTADAEELGKNLGDDLAEGKPTLPLIH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + +S I +G + + + + + +L T RA KA +L Sbjct: 243 AIAHAPEAQSQQIRSAIENG--GCDEVDEVVATLNQVGSLEYTMQRAVEEADKAIAALDV 300 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP++ ++++L + ++R N Sbjct: 301 LPETPFREALASLARIAVERRN 322 >gi|269960912|ref|ZP_06175282.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3] gi|269834352|gb|EEZ88441.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3] Length = 323 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 130/319 (40%), Positives = 193/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A ++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPEEVEVAFQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T + I ++ L+ +M+E +L T +A KA L L Sbjct: 244 MRNTTPENAQMIREAIEKAN-GMDRLEDILAVMQEAGSLEYTTQKAMDEADKAIAELAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + ++R Sbjct: 303 PESDYKQALITLAHMAVKR 321 >gi|261345175|ref|ZP_05972819.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541] gi|282566867|gb|EFB72402.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541] Length = 323 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 134/315 (42%), Positives = 190/315 (60%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT +DM VN +IL ++ SDV +I + Y+I GGKR+RPM+ + L Y G H Sbjct: 8 ELTNEDMSAVNKVILSQLNSDVALINQLGYYIISGGGKRIRPMIAILAGRSLGYSGHKHT 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M+ + Sbjct: 68 QVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQMMTDLD 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L+ +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA S+++A Sbjct: 128 SMRVLKLMSEATNVIAEGEVLQLMNCNDPNITEENYMQVIYSKTARLFEAASHASAILAN 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + +AL+ YG +G AFQLVDD+LDY + ++GKN G+D GKPTLP++ A G Sbjct: 188 ATPAQEKALQDYGRYIGTAFQLVDDLLDYDADNTQLGKNTGDDLDEGKPTLPLLHAMNHG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + E + I G L M+ +L T RA QKA D+L L DS+ Sbjct: 248 NEEESALIRQAIEQGN-GRHLLDTVLATMKRCGSLDYTYQRAQEEAQKAIDALDILEDSA 306 Query: 306 WKKSLMEVVDFCLQR 320 +K++L+ + +QR Sbjct: 307 YKQALIGLAHIAIQR 321 >gi|109900040|ref|YP_663295.1| trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c] gi|109702321|gb|ABG42241.1| Trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c] Length = 323 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 133/315 (42%), Positives = 194/315 (61%), Gaps = 1/315 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN LI K++ SDV +I + Y++ SGGKRLRP+LT+ A L + + H Sbjct: 9 LAEPDMLAVNQLIQKQVNSDVSLINQLGFYIVNSGGKRLRPLLTVLAARALNIQTEQHHT 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IEFIHTATLLHDDVVD+S +RRG+ A V+GNQ SVLVGDFL +++F M++ S Sbjct: 69 LAAIIEFIHTATLLHDDVVDESTMRRGRETANEVFGNQASVLVGDFLYTRSFQMMVTLDS 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ LS +AEGE+ QL + D TEE Y+ VI SKTA LF AA ++ ++ Sbjct: 129 MRVMQILSDATNVIAEGEVLQLMNCNDPDTTEESYMEVIYSKTARLFEAATLLAGVLTKQ 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ A++ YG LG AFQLVDD++DY + EMGKN+G+D GKPTLP++ A G Sbjct: 189 SEAIENAMQDYGKYLGTAFQLVDDIMDYASDSEEMGKNMGDDLAEGKPTLPLLYAMWHGN 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +++ + I G ++NL M + AL T+ +A Q+A D+L + +S + Sbjct: 249 EQQTAIIREAIETGN-GMDNLTPILETMEQTGALTYTKQQALKASQQAIDALSPIEESVY 307 Query: 307 KKSLMEVVDFCLQRL 321 K++L+ + ++R+ Sbjct: 308 KEALIGLAHISVERV 322 >gi|152980282|ref|YP_001354685.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille] gi|151280359|gb|ABR88769.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille] Length = 334 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 129/310 (41%), Positives = 196/310 (63%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ V+ +I +++ S+V ++ + Y+I +GGKR+RP+L L A YRG +H LA Sbjct: 25 DLNAVDTVIRQKLHSEVALVNQIADYIISAGGKRIRPVLVLLMANAYGYRGTDHHQLAAV 84 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S+LRRG+ A ++GN SVLVGDFL S+AF M++ + Sbjct: 85 VEFIHTATLLHDDVVDESSLRRGRKTANALFGNAASVLVGDFLYSRAFQMMVSVGDIRIM 144 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ +AEGE+ QL + DV+EE Y VI+SKTA LF AA ++ +LIAG + Sbjct: 145 QILADATNVIAEGEVLQLLNMHDPDVSEERYTQVIRSKTAKLFEAAAQLGTLIAGASDDE 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A YG +LG AFQL+DDVLDY G+ +++GKN+G+D R GK TLP+I + GT ++ Sbjct: 205 IEAAAEYGRSLGTAFQLIDDVLDYSGQADDIGKNVGDDLREGKATLPLIYLMEHGTPEQR 264 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 +S I +G ++ + + AL T+ +A +A S+ LPD+++K +L Sbjct: 265 ELVRSCIENG--DEQHFDAVLQAVTTSGALDYTKRKAEEASARATASIAGLPDNAFKDAL 322 Query: 311 MEVVDFCLQR 320 +++ F + R Sbjct: 323 LKLSAFAVNR 332 >gi|258627044|ref|ZP_05721842.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603] gi|258580718|gb|EEW05669.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603] Length = 348 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 188/319 (58%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y G Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYHG 88 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 268 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 269 MQHGNAEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQHEADKAIAELAIL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 328 PESEYKQALITLAHMAVNR 346 >gi|207721484|ref|YP_002251924.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum MolK2] gi|206586644|emb|CAQ17230.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum MolK2] Length = 352 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 133/311 (42%), Positives = 195/311 (62%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG++H LA Sbjct: 42 EDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGNHHYELAA 101 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 102 VVEFIHTATLLHDDVVDESELRRGRQTANAVFGNAASVLVGDFLYSRAFQMMVQADSMRV 161 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G + Sbjct: 162 MQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAA 221 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ + Sbjct: 222 TEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIHLLSHGTEEQ 281 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + I G E+ F ++ + AL T A A +++ LP S ++++ Sbjct: 282 RALARQAIEQG--GTEHFDAIFDAIQASGALEYTRKAAEREASAAAEAIIALPPSQFRQT 339 Query: 310 LMEVVDFCLQR 320 L+E+ F LQR Sbjct: 340 LIELCAFSLQR 350 >gi|212709993|ref|ZP_03318121.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM 30120] gi|212687402|gb|EEB46930.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM 30120] Length = 323 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 134/315 (42%), Positives = 188/315 (59%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT +DM VN IL ++ SDV +I + Y++ GGKR+RPM+ + L Y H+ Sbjct: 8 ELTAEDMSAVNEAILSQLNSDVALINQLGYYIVSGGGKRIRPMIAILAGRSLGYSEHKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M+ + Sbjct: 68 QVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQMMTDLD 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L+ +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA S+++A Sbjct: 128 SMRVLKLMSEATNVIAEGEVLQLMNCNDPDITEESYMQVIYSKTARLFEAASHASAILAN 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 +AL+ YG +G AFQLVDD+LDY + ++GKN G+D GKPTLP++ A Q G Sbjct: 188 ATPEQEKALQDYGRYIGTAFQLVDDLLDYDADNTQLGKNTGDDLDEGKPTLPLLHAMQHG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + E + I G L+ M+ +L T RA QKA D+L L DS Sbjct: 248 NEEESALIRQAIEQGN-GRHLLETVLSTMKRCGSLEYTYQRAQEEAQKAIDALNALEDSV 306 Query: 306 WKKSLMEVVDFCLQR 320 +K++L+ + +QR Sbjct: 307 YKEALIGLAHVAIQR 321 >gi|299065629|emb|CBJ36801.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CMR15] Length = 322 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 132/311 (42%), Positives = 193/311 (62%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG +H LA Sbjct: 12 EDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGQHHYELAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M+++ S Sbjct: 72 VVEFIHTATLLHDDVVDESELRRGRQTANAAFGNAASVLVGDFLYSRAFQMMVQADSMRV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G + Sbjct: 132 MQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAA 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ + Sbjct: 192 TEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIYLLSHGTETQ 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + I G E+ F ++ + AL T A A +++ LP S ++++ Sbjct: 252 RALARQAIEQG--GTEHFDAIFAAIQASGALEYTRKAAEREASAAAEAIIALPPSQFRQT 309 Query: 310 LMEVVDFCLQR 320 L+E+ F LQR Sbjct: 310 LIELCAFSLQR 320 >gi|288941872|ref|YP_003444112.1| trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180] gi|288897244|gb|ADC63080.1| Trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180] Length = 322 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 133/312 (42%), Positives = 190/312 (60%), Gaps = 4/312 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D + V+ LIL+R+ SDV +I + Y++ SGGKRLRP+ L A Y G+ H+ LA Sbjct: 12 EDTKAVDALILRRLQSDVVLINQIGHYIVNSGGKRLRPLSVLLAARACGYTGERHIDLAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHT+TLLHDDVVD S LRR + A +VWGN SVLVGDFL S++F M+++ + Sbjct: 72 IVEFIHTSTLLHDDVVDGSELRRNRETANVVWGNDASVLVGDFLYSRSFEMMVDVGNMRV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E L+ +AEGE+ QL ++ D E Y+ VI KTA LF A + ++IA Sbjct: 132 MEVLAHATNRIAEGEVLQLLNERDPDTDEARYMEVISRKTATLFEAGTRLGAVIAESPPE 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + +A++ YG+ LGIAFQLVDD LDY + E+GKN+G+D GKPTLP+I A Q GT + Sbjct: 192 IEEAIREYGLRLGIAFQLVDDALDYSVDNAELGKNVGDDLDEGKPTLPIIRAMQVGTPEQ 251 Query: 250 KNFWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + + I + G+ +E++ A + A+ T A SY +AK +L LP S Sbjct: 252 RALLRDAIEHGGRDRIESVTAA---IASTDAIDYTTQLAQSYAAQAKKALERLPASPAND 308 Query: 309 SLMEVVDFCLQR 320 +L + DF + R Sbjct: 309 ALALLADFAVAR 320 >gi|317401225|gb|EFV81869.1| octaprenyl-diphosphate synthase [Achromobacter xylosoxidans C54] Length = 321 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 132/312 (42%), Positives = 191/312 (61%), Gaps = 3/312 (0%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 + DM+ V+ +I +R+ SDV +I + Y+I +GGKR+RP + L A L Y+G +H LLA Sbjct: 11 VDDMKAVDAVIRERLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQGTHHQLLA 70 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M++E S Sbjct: 71 AVVEFIHTATLLHDDVVDESDLRRGRETANAVFGNAASVLVGDYLYSRSFEMMVEADSMR 130 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V +++AG Sbjct: 131 IMSILSEATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGATP 190 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 A +YG ++G AFQLVDDVLDY G+ +GKN+G+D R GKPTLP+I + GT + Sbjct: 191 EQEAAAAAYGRHVGTAFQLVDDVLDYSGDAAALGKNVGDDLREGKPTLPLIRVMEVGTPQ 250 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 ++ + I G + A ++ AL A + +A+++L P S + Sbjct: 251 QQQLIRDAIKTGDADFAAVAAA---IQATDALEHARQAAVAEADRAREALSAYPVSPFLN 307 Query: 309 SLMEVVDFCLQR 320 SL+E F + R Sbjct: 308 SLLEFCAFAVNR 319 >gi|238783532|ref|ZP_04627554.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970] gi|238715587|gb|EEQ07577.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970] Length = 323 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 131/315 (41%), Positives = 191/315 (60%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT DM VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+G H+ Sbjct: 8 ELTAPDMAAVNTTILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALHYQGSKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ + Sbjct: 68 TVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMMTSLE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + ++++A Sbjct: 128 SLRVLTLMSEATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSAAVLAD 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ A + G Sbjct: 188 ASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLHAMRNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T ++ + I G L+ + M++ +L T RA KA +L+ LP+S Sbjct: 248 TPEQETMIRQAIEQGS-GRHLLEPVLVAMQQCGSLDYTRQRAEEEADKAIAALQILPESE 306 Query: 306 WKKSLMEVVDFCLQR 320 ++ +L + +QR Sbjct: 307 YRLALEGLAHIAVQR 321 >gi|332678210|gb|AEE87339.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida Fx1] Length = 325 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 137/330 (41%), Positives = 202/330 (61%), Gaps = 16/330 (4%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYS 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLI-------AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 +I A Q+++R +YG+ LG AFQ+ DDVLDY + +GKNIG+D GK Sbjct: 184 GVISLDKQNYANYQDNIR----NYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGK 239 Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQ 292 TLP I A T++++ K I G+ +++ + I M ++ VD Y+ A Y Sbjct: 240 MTLPTIYALANVTEQQQQILKKAIEKGEYTIDEI----IAMVKDSGAVDYSYKVACQYAD 295 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 AK + LPDS +K++++ + D + R N Sbjct: 296 LAKQQIDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|70732635|ref|YP_262398.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5] gi|68346934|gb|AAY94540.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5] Length = 322 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 130/312 (41%), Positives = 190/312 (60%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDGIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANAMWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ +AG Sbjct: 133 RILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALAGATEEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 AEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G I E+L+ + + +L T A Y +A L LP S ++ +L Sbjct: 253 ALVRQAIQKGGI--EDLESIRAAVEASGSLDYTAQLARDYVARAITCLEALPPSEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|262172465|ref|ZP_06040143.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] gi|261893541|gb|EEY39527.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] Length = 323 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 189/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 244 MQHGNPEQALMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQHEADKAIAELDIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 303 PESEYKQALITLAHMAVNR 321 >gi|262403940|ref|ZP_06080497.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] gi|262349902|gb|EEY99038.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] Length = 323 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSLKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCDASSEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 244 MQHGNPEQALMIREAIEKAN-GMSRLNEILAAMEQTGSLRYTIEKAQHEADKAIAELDIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 303 PESEYKQALITLAHMAVNR 321 >gi|91794278|ref|YP_563929.1| trans-hexaprenyltranstransferase [Shewanella denitrificans OS217] gi|91716280|gb|ABE56206.1| Trans-hexaprenyltranstransferase [Shewanella denitrificans OS217] Length = 323 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 137/324 (42%), Positives = 199/324 (61%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +L DM+ V+ LI +++ SDV +I + Y+I SGGKRLRP+LT+ + Y Sbjct: 3 LNAIRELAETDMKAVDQLIYQQLESDVALINQLAFYIIKSGGKRLRPLLTVLACRAMGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA +EFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GDKHLKLAAIVEFIHTASLLHDDVVDESLLRRGRETANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S L+ L+ LAEGE+ QL + + TE +Y+ VI KTA LF AA ++ Sbjct: 123 MTELDSLHVLKVLANTTNVLAEGEVLQLMNCNDPNTTEANYMRVIYCKTAKLFEAATLLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + + AL YG LG AFQL DD+LDY +E+GKNIG+D GKPTLP+I Sbjct: 183 GVLAGASVAEQIALGEYGKFLGTAFQLTDDLLDYTASSDELGKNIGDDLAEGKPTLPLIF 242 Query: 241 AFQRGTKREKNFWKSTI--NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 A + G+ K K I DG +++ + KA + ++ AL T+ +A +KA +L Sbjct: 243 AMEHGSAHAKALIKQAIEQGDGTQAIDEIVKA---LHDSGALEYTKNKAIEEAEKAIAAL 299 Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322 C+ DS K +L+ + + + R N Sbjct: 300 SCVKDSRHKDALISLANIAVNRSN 323 >gi|90411954|ref|ZP_01219962.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum 3TCK] gi|90327212|gb|EAS43584.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum 3TCK] Length = 323 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 131/319 (41%), Positives = 194/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM +V+ I ++ SDV +I + Y++ GGKRLRPML + A L Y+G Sbjct: 4 KAIQALTANDMAEVDAKIQAQLNSDVALINQLGFYIVSGGGKRLRPMLVVLAARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H+ A +EFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 64 DKHITAAAFVEFIHTATLLHDDVVDESDMRRGKETANAAFGNAASVLVGDYIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +S + L+ +S +AEGE+ QL + + TE++Y+ VI SKTA LF AA ++S+ Sbjct: 124 TSLRSLKILDVMSEATNVIAEGEVLQLMNCNDPNTTEDNYMQVIYSKTARLFEAATQISA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +I V AL+ YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A Sbjct: 184 IITESSTEVEVALQDYGRYLGTAFQLIDDVLDYVADGKEMGKNVGDDLSEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G + + + I ++ L MRE +L T+ RA KA +L + Sbjct: 244 MHNGNEAQSAMIREAIEKSN-GMDKLNDILAAMREAGSLEYTQQRAEEEADKAIAALAPI 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 +S +K++L+++ ++R Sbjct: 303 AESDYKEALIQLAHLAVKR 321 >gi|260773626|ref|ZP_05882542.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio metschnikovii CIP 69.14] gi|260612765|gb|EEX37968.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio metschnikovii CIP 69.14] Length = 323 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 130/319 (40%), Positives = 193/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KV+ IL ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTADDMAKVDKTILAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 EGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANATFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSHSVNIIAEGEVLQLMNCNDPETTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V +A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 MLCDASPEVERAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + + + I +E L M++ +L T +A KA L L Sbjct: 244 MRNSQGEQSAMIREAIEKAN-GMEKLTAILATMQQAGSLEYTTAKAQQEADKAIAELAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + ++R Sbjct: 303 PESDYKQALIALAHMAVKR 321 >gi|300718598|ref|YP_003743401.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661] gi|299064434|emb|CAX61554.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661] Length = 323 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 132/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ S+V +I + Y+I GGKR+RPM+ + A + Y Sbjct: 3 LEQINELTAQDMADVNATILEQLNSEVSLINQLGYYIISGGGKRIRPMIAVLAARAVNYT 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GKQHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A +AL+ YG +G AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 AILAEAVPEQEKALQDYGRFIGTAFQLIDDLLDYSADGKTLGKNVGDDLSEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I G L+ MR+ +L T A KA +L+ Sbjct: 243 AMRNGTPEQSQMIREAIEKGN-GRHLLEPVLETMRQCGSLEWTRQAAEHEADKAISALKA 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S W+ +L + +QR Sbjct: 302 LPESPWRSALEALAHMSVQR 321 >gi|254483435|ref|ZP_05096664.1| polyprenyl synthetase superfamily protein [marine gamma proteobacterium HTCC2148] gi|214036309|gb|EEB76987.1| polyprenyl synthetase superfamily protein [marine gamma proteobacterium HTCC2148] Length = 320 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 131/320 (40%), Positives = 197/320 (61%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + + E+VN LI+ ++ SDV+M+ ++ Y++ +GGKRLRP+L L TA Sbjct: 1 MQDIRSAVAAEFEQVNHLIIDQLHSDVDMVENIGHYIVDAGGKRLRPLLVLLTAAAFGRC 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + + A IEFIHTATLLHDDVVD S+LRRG+ A +GN SVLVGDFL ++AF + Sbjct: 61 GPDQIKFAAVIEFIHTATLLHDDVVDISSLRRGRPTANAEFGNAPSVLVGDFLYTRAFQL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ + L ++ T+AEGE+ QL + N D TE+ YL VI KTA+LF+A + Sbjct: 121 MVQLGDMDILTHMANTTNTIAEGEVLQLVRAGNADTTEQQYLDVITRKTAILFAAGCYGA 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + ++SV Q + S+G+NLGIAFQ++DD+LDY G+ MGKN+G+D GKPTLP+I Sbjct: 181 ATLCHQESSVCQGMHSFGLNLGIAFQMIDDILDYEGDPAAMGKNVGDDLTEGKPTLPLIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + GTK E+ + I + + E++++ ++ AL ++ +A Y A L Sbjct: 241 TLEHGTKEEQALVRRAITEK--TAEDIEQVLAAVQRCGALNYSKQQARKYHNLALAELAA 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS + SL V + R Sbjct: 299 LPDSPARASLQAVTALSINR 318 >gi|3410887|dbj|BAA32241.1| decaprenyl diphosphate synthase [Gluconobacter oxydans] Length = 315 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 133/313 (42%), Positives = 197/313 (62%), Gaps = 4/313 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLL 67 M N I+ R+ S V +IP + +L+ +GGKRLRP+LTLA+A + Y+ HV L Sbjct: 1 MLACNRAIIARMESPVPLIPQLGAHLVAAGGKRLRPLLTLASARLCGYQPGPDHQRHVGL 60 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL +++F ++ S Sbjct: 61 AACVEFIHTATLLHDDVVDESTLRRGLASANAVFGNKASVLVGDFLFARSFQLMTADGSL 120 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + + LS + T+AEGE+ Q+ + +L E YL VI KTA LF+AA V +++A Sbjct: 121 KVMAILSDASATIAEGEVLQMVVQNDLTTPVERYLEVIHGKTAALFAAACRVGAVVAERP 180 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + +AL+ +G NLG+AFQLVDD LDY + +GK +G+D R GK TLPV+ A++ G+ Sbjct: 181 EAEEEALERFGTNLGMAFQLVDDALDYAADQQVLGKTVGDDMREGKITLPVLAAYEAGSP 240 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ FW+ I +G+ + ++L A ++ + A+ T RA Y A ++L PDS + Sbjct: 241 EDRIFWERVIGEGEQTEDDLPHALNLIAKTGAINTTIARAQVYADAAVEALSIFPDSELR 300 Query: 308 KSLMEVVDFCLQR 320 + L+E V F + R Sbjct: 301 RLLIETVQFTVNR 313 >gi|219871055|ref|YP_002475430.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165] gi|219691259|gb|ACL32482.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165] Length = 327 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 130/314 (41%), Positives = 193/314 (61%), Gaps = 1/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM+ V+ IL ++ SDV +I + Y+I GGKR+RP++ + A + Y+G H+ Sbjct: 13 LVKADMQAVDQAILAQLNSDVVLINQLGHYIISGGGKRIRPLIAVLAANTVGYKGQEHIT 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 A +EFIHTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF M+ S Sbjct: 73 CAAFVEFIHTATLLHDDVVDESDMRRGRETANARFGNAASVLVGDFIYTRAFQMMASLCS 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ +S +AEGE++QL N + TE +Y+ VI SKTA LF AA + S++++G Sbjct: 133 LDVLQVMSDATNVIAEGEVQQLMNVNNPETTEANYMQVIYSKTARLFEAASQCSAIVSGA 192 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + A++ YG LG AFQLVDD+LDY ++GKNIG+D GKPTLP++ A + G Sbjct: 193 DQATVIAMRDYGRYLGTAFQLVDDILDYSANAEQLGKNIGDDLAEGKPTLPLLHAMRSGN 252 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ + I G E L + IM E+++L T RA QKA D++ LP+S + Sbjct: 253 LQQAALIREAIEQGG-KREALDEILAIMAEHKSLDYTMERAKQEAQKAVDAIAILPESEY 311 Query: 307 KKSLMEVVDFCLQR 320 K++L+ + + R Sbjct: 312 KQALISLAYLSVDR 325 >gi|254374334|ref|ZP_04989816.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548] gi|151572054|gb|EDN37708.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548] Length = 325 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 137/330 (41%), Positives = 201/330 (60%), Gaps = 16/330 (4%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYS 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLI-------AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 +I A Q+++R +YG+ LG AFQ+ DDVLDY + +GKNIG+D GK Sbjct: 184 GVISLDKQNYANYQDNIR----NYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGK 239 Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQ 292 TLP I A T++++ K I G+ ++ + I M ++ VD Y+ A Y Sbjct: 240 MTLPTIYALANVTEQQQQILKKAIEKGEYRIDQI----IAMVKDSGAVDYSYKVACQYAD 295 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 AK + LPDS +K++++ + D + R N Sbjct: 296 LAKQQIDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|258623396|ref|ZP_05718400.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573] gi|258584362|gb|EEW09107.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573] Length = 348 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 188/319 (58%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y G Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYHG 88 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 268 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 269 MQHGNPEQALMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQHEADKAIAELDIL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 328 PESEYKQALITLAHMAVNR 346 >gi|261493062|ref|ZP_05989602.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496350|ref|ZP_05992745.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307994|gb|EEY09302.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311282|gb|EEY12445.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 335 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 130/324 (40%), Positives = 199/324 (61%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ VN IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 11 LEQIQALANEDMQAVNAEILAQLNSEVLLINQLGHYIIAGGGKRIRPLIAVLAARALGYR 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 71 GKKHITAAAFIEFVHTATLLHDDVVDESDMRRGRPTANAHFGNAASVLVGDFIYTRSFQM 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 131 MTDLDSLRVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + ALK+YG LG AFQL+DD+LDY + +GKN+G+DF GKPTLP++ Sbjct: 191 AIVADASEEIETALKNYGCYLGTAFQLIDDILDYSAQSESLGKNVGDDFVEGKPTLPLLH 250 Query: 241 AFQRGTKREKN----FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A K K ++ I +G +E + + IM+E+++L +A QKA D Sbjct: 251 AMHAADKAGKTTQAELIRNAIENGG-ELEQIPQVLAIMQEHQSLDYAMQKAREEAQKAVD 309 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 SL LP+S +K++L+ + + R Sbjct: 310 SLGVLPESEYKQALVSLAYLSVDR 333 >gi|118497514|ref|YP_898564.1| octaprenyl diphosphate synthase [Francisella tularensis subsp. novicida U112] gi|195536208|ref|ZP_03079215.1| polyprenyl synthetase family protein [Francisella tularensis subsp. novicida FTE] gi|118423420|gb|ABK89810.1| octaprenyl diphosphate synthase [Francisella novicida U112] gi|194372685|gb|EDX27396.1| polyprenyl synthetase family protein [Francisella tularensis subsp. novicida FTE] Length = 325 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 137/330 (41%), Positives = 201/330 (60%), Gaps = 16/330 (4%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLI-------AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 +I A Q+++R +YG+ LG AFQ+ DDVLDY + +GKNIG+D GK Sbjct: 184 GVISLDKQNYANYQDNIR----NYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGK 239 Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQ 292 TLP I A T++++ K I G+ ++ + I M ++ VD Y+ A Y Sbjct: 240 MTLPTIYALANVTEQQQQILKKAIEKGEYRIDEI----IAMVKDSGAVDYSYKVACQYAD 295 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 AK + LPDS +K++++ + D + R N Sbjct: 296 LAKQQIDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|302877611|ref|YP_003846175.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] gi|302580400|gb|ADL54411.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] Length = 320 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ L DM V+ +I ++ S+V ++ V +Y++ SGGKRLRP L + +A Y Sbjct: 1 MENFNQLLAADMASVDQVIRNKLHSEVVLVNQVAEYIVNSGGKRLRPALVVLSAHAFNYT 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M Sbjct: 61 GEHHHELAAVVEFIHTATLLHDDVVDESGLRRGRETANALFGNAASVLVGDFLYSRAFQM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S ++ L+ +AEGE+ QL + DV E+Y+ VI KTA LF AA+ + Sbjct: 121 MVEVGSMRVMQTLADATNVIAEGEVLQLLNCNDADVDAENYMRVIHYKTAKLFEAAMRLG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + A +YGM+LG AFQL+DDVLDY + GK++G+D GKPTLP+I Sbjct: 181 AILAKTSSEDEAAAATYGMHLGTAFQLIDDVLDYSADEAATGKHLGDDLAEGKPTLPLIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q GT ++ +S I +G + I+ + AL T +A + A +++ Sbjct: 241 AMQHGTAQQAAVVRSAIEEGDVG--KFADVLKIIHDTGALDFTRLQAMREVELACAAIKG 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S +K LME+ F R Sbjct: 299 LPASKYKTCLMELAHFAATR 318 >gi|156502468|ref|YP_001428533.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|290953802|ref|ZP_06558423.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312813|ref|ZP_06803545.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica URFT1] gi|156253071|gb|ABU61577.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 325 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 137/326 (42%), Positives = 201/326 (61%), Gaps = 8/326 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALVKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIA-GVQNSVRQA--LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 LI+ Q+ + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GLISIDKQDYTKYQGRIKNYGVYLGNAFQITDDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKD 296 I A T++++ K I G+ ++ + I M ++ VD Y+ A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEYRIDEI----IAMVKDSGAVDYSYKVACQYADLAKQ 299 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 300 QIDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|171059952|ref|YP_001792301.1| polyprenyl synthetase [Leptothrix cholodnii SP-6] gi|170777397|gb|ACB35536.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6] Length = 313 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 127/301 (42%), Positives = 188/301 (62%), Gaps = 2/301 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +M +V+ +I +R+ S+V +I + Y++ +GGKR+RP+L L A L++ G +A Sbjct: 4 EMAQVDAVIHRRLASEVALINQISHYIVSAGGKRIRPLLVLLFARALDFDGPERFEMAAT 63 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M++ L Sbjct: 64 VEFIHTATLLHDDVVDESDLRRGRKTANAIFGNAASVLVGDFLYSRAFQMMVSVNRLRVL 123 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ +AEGE+ QL + D++ E YL VI+ KTA LF A+ +++AGV + Sbjct: 124 DVLADATNVIAEGEVLQLLNMHDPDISIEAYLRVIRYKTAKLFEASARTGAVLAGVSAPL 183 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + SYG LG AFQL+DD+LDY G ++GKN+G+D R GKPT+P++LA Q G+ ++ Sbjct: 184 EDSCASYGRCLGTAFQLIDDLLDYEGATAQLGKNVGDDLREGKPTMPLLLAMQHGSSTQR 243 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + I G+ VE L + I+R AL T A KA+ L LP S +K++L Sbjct: 244 DLIRHAIEHGE--VERLPEIIEIVRSTGALEATRQAARDEANKARAHLSSLPSSQFKEAL 301 Query: 311 M 311 + Sbjct: 302 L 302 >gi|89256379|ref|YP_513741.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica LVS] gi|115314825|ref|YP_763548.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica OSU18] gi|254367716|ref|ZP_04983737.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica 257] gi|89144210|emb|CAJ79480.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica LVS] gi|115129724|gb|ABI82911.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica OSU18] gi|134253527|gb|EBA52621.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica 257] Length = 325 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 137/326 (42%), Positives = 201/326 (61%), Gaps = 8/326 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALVKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIA-GVQNSVRQA--LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 LI+ Q+ + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GLISIDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKD 296 I A T++++ K I G+ ++ + I M ++ VD Y+ A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEYRIDEI----IAMVKDSGAVDYSYKVACQYADLAKQ 299 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 300 QIDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|157368719|ref|YP_001476708.1| octaprenyl diphosphate synthase [Serratia proteamaculans 568] gi|157320483|gb|ABV39580.1| Polyprenyl synthetase [Serratia proteamaculans 568] Length = 323 Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQITELTAQDMAAVNATILEQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALHYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ + +AL+ YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++ Sbjct: 183 AILSDASVAEEKALQDYGRYLGTAFQLIDDLLDYSADGSTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A +K + I G L+ M++ +L T RA KA +L+ Sbjct: 243 AMHNSEGEQKAMIRGAIEQGN-GRHLLEPVLQAMQQCGSLEYTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S + +L + +QR Sbjct: 302 LPESPHRSALEGLAHLAVQR 321 >gi|94501366|ref|ZP_01307886.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65] gi|94426479|gb|EAT11467.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65] Length = 322 Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 132/307 (42%), Positives = 193/307 (62%), Gaps = 2/307 (0%) Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 + N +IL+++ S+V M+ + ++I SGGKR+RP+L L A LE NH LLA IEF Sbjct: 16 RTNEIILEQLSSNVPMVEKIGHHIIESGGKRMRPLLVLLAAKALESNEQNHPLLASIIEF 75 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +HTATLLHDDVVD S +RRGK A +GN SVLVGDFL S+AF M+++ S E + L Sbjct: 76 LHTATLLHDDVVDTSDMRRGKATANAAFGNAPSVLVGDFLYSRAFEMMVQLGSMEVMAIL 135 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 S C +AEGE+ QL KN +V E+ Y+ VI+ KTA+LF A+ + +A +A Sbjct: 136 SNATCVIAEGEVMQLMNVKNPNVGEDKYMDVIQGKTAMLFEASSHSGAKLANASPEQAEA 195 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L+ +G +LG+AFQLVDDVLDY G +E+GKN+G+D GKPTLP+I A Q ++ + + Sbjct: 196 LRLFGHHLGMAFQLVDDVLDYIGNADELGKNVGDDLAEGKPTLPLIFAMQNASQEQADVI 255 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + I G E+L K I++ A+ T+ +A + +A +++ L D+ K++L + Sbjct: 256 RQAIRKG--GTEDLPKIIEIVQSCGAIDYTQQKAQEHVNQACEAIAILADTPAKQALQTL 313 Query: 314 VDFCLQR 320 D + R Sbjct: 314 ADMAINR 320 >gi|71278535|ref|YP_271161.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H] gi|71144275|gb|AAZ24748.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H] Length = 327 Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM VN LI ++ SDV +I + Y++ GGKR+RPMLT+ A Y+ Sbjct: 7 IKAIQALAQSDMAAVNDLIYDQLQSDVALINQLGIYIVNGGGKRMRPMLTVLAARAFAYQ 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRG+ A ++GN SVLVGDFL +++F M Sbjct: 67 GDKHLEIAAIIEFIHTATLLHDDVVDESNMRRGRETANALFGNSASVLVGDFLYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + ++ LS +AEGE+ QL + TEE Y+ VI KTA LF AA ++ Sbjct: 127 MTKLGDMRIMDILSEATNIVAEGEVLQLMNCNDASTTEESYMQVIYCKTAKLFEAATRLA 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IA + QA+ YG LG AFQLVDD++DY + EMGKN+G+D GKPTLP++ Sbjct: 187 AVIAKQDAKIEQAMADYGKYLGTAFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLY 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G + ++ K I G ++NL+ M E +L T+ +A KA +L Sbjct: 247 AMKHGNEAQQKLIKEAIELGN-GMDNLELILQAMEETGSLRYTQKQAEIEADKAIKALNV 305 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 + DS K++L+ + R Sbjct: 306 IADSEHKQALISLAHIAANR 325 >gi|22124585|ref|NP_668008.1| octaprenyl diphosphate synthase [Yersinia pestis KIM 10] gi|45440424|ref|NP_991963.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Microtus str. 91001] gi|108806061|ref|YP_649977.1| octaprenyl diphosphate synthase [Yersinia pestis Antiqua] gi|108813417|ref|YP_649184.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516] gi|145600809|ref|YP_001164885.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides F] gi|153997290|ref|ZP_02022390.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125] gi|162421069|ref|YP_001608269.1| octaprenyl diphosphate synthase [Yersinia pestis Angola] gi|165928166|ref|ZP_02223998.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165937469|ref|ZP_02226032.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. IP275] gi|166011293|ref|ZP_02232191.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166214028|ref|ZP_02240063.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401227|ref|ZP_02306727.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420704|ref|ZP_02312457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423704|ref|ZP_02315457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470490|ref|ZP_02335194.1| octaprenyl-diphosphate synthase [Yersinia pestis FV-1] gi|218930527|ref|YP_002348402.1| octaprenyl diphosphate synthase [Yersinia pestis CO92] gi|229839166|ref|ZP_04459325.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896655|ref|ZP_04511822.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A] gi|229899730|ref|ZP_04514871.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229903892|ref|ZP_04519005.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516] gi|270489119|ref|ZP_06206193.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294505357|ref|YP_003569419.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003] gi|21957387|gb|AAM84259.1|AE013669_9 octaprenyl diphosphate synthase [Yersinia pestis KIM 10] gi|45435281|gb|AAS60840.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Microtus str. 91001] gi|108777065|gb|ABG19584.1| octaprenyl-diphosphate synthase [Yersinia pestis Nepal516] gi|108777974|gb|ABG12032.1| octaprenyl-diphosphate synthase [Yersinia pestis Antiqua] gi|115349138|emb|CAL22101.1| octaprenyl-diphosphate synthase [Yersinia pestis CO92] gi|145212505|gb|ABP41912.1| octaprenyl-diphosphate synthase [Yersinia pestis Pestoides F] gi|149288927|gb|EDM39007.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125] gi|162353884|gb|ABX87832.1| octaprenyl-diphosphate synthase [Yersinia pestis Angola] gi|165914574|gb|EDR33188.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. IP275] gi|165919853|gb|EDR37154.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989677|gb|EDR41978.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166204823|gb|EDR49303.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|166961510|gb|EDR57531.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049252|gb|EDR60660.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057874|gb|EDR67620.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679662|gb|EEO75765.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516] gi|229687222|gb|EEO79297.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229695532|gb|EEO85579.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700433|gb|EEO88465.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A] gi|262363422|gb|ACY60143.1| octaprenyl-diphosphate synthase [Yersinia pestis D106004] gi|262367203|gb|ACY63760.1| octaprenyl-diphosphate synthase [Yersinia pestis D182038] gi|270337623|gb|EFA48400.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294355816|gb|ADE66157.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003] gi|320013717|gb|ADV97288.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 323 Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 131/315 (41%), Positives = 185/315 (58%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+++ A L Y+G H+ Sbjct: 8 ELTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMISVLVARALNYQGSKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ + Sbjct: 68 TVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMMTGLQ 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L +S +AEGE+ QL N D+TEE Y+ VI SKTA LF AA + +++++ Sbjct: 128 SMRVLTLMSEATNVIAEGEVLQLMNCNNPDITEESYMQVIYSKTARLFEAAAQSAAILSD 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL++YG LG AFQL+DD+LDY E + +GKN G+D GKPTLP++ A G Sbjct: 188 ASEEQELALQNYGRYLGTAFQLIDDLLDYSAEGSTLGKNTGDDLNEGKPTLPLLHAMHNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + + I G L+ M +LV T RA KA +L LP+S Sbjct: 248 TPEQAAMIRQAIEQGN-GRHLLEPVLAAMEHCGSLVYTRQRAEEEADKAIAALHALPESD 306 Query: 306 WKKSLMEVVDFCLQR 320 ++ +L + + R Sbjct: 307 YRLALEGLAHISVHR 321 >gi|253998223|ref|YP_003050286.1| trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4] gi|253984902|gb|ACT49759.1| Trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4] Length = 322 Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 130/311 (41%), Positives = 189/311 (60%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM+ V+ +I K + SDV +I V +Y+I GGKRLRP L L +A H LA Sbjct: 12 QDMQAVDAVIRKSLHSDVVLINQVAEYIINGGGKRLRPALVLLSAGAFGEVNARHHELAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+SA+RRG+ A ++GN SVLVGDF+ S+AF M++ +S Sbjct: 72 VVEFIHTATLLHDDVVDESAMRRGRATANTLFGNAASVLVGDFIYSRAFQMMVGVESMRV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E L+ +AEGE+ QL + D+T+E YL VI KTA LF AA + ++I Sbjct: 132 MEVLAEATNIIAEGEVLQLLNVHDADITDEAYLKVIHYKTAKLFEAATRLGAIICAASEQ 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 QA+ YGM LG AFQL+DDVLD+ G+ E+GKN+G+D GKPTLP+++A + GT + Sbjct: 192 DEQAMAEYGMRLGTAFQLIDDVLDFSGDSQEIGKNLGDDLAEGKPTLPLLIAMRLGTTAQ 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I +G ++ L + E AL A + D+++ LPDS +++ Sbjct: 252 AQTIRKAIEEG--GLDELPAVMQAVHETGALDQVRAIARQEAKAGCDAIQHLPDSPSRQA 309 Query: 310 LMEVVDFCLQR 320 L+++ +F + R Sbjct: 310 LLKLAEFAVDR 320 >gi|325981722|ref|YP_004294124.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212] gi|325531241|gb|ADZ25962.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212] Length = 322 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 133/311 (42%), Positives = 193/311 (62%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM V+ +I +++ S V +I V +Y+I SGGKRLRP L + +A Y G H LA Sbjct: 12 QDMSIVDNVIREKLHSHVLLIRQVSEYIINSGGKRLRPALVILSAGAFGYSGKFHYNLAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEFIHTATLLHDDVVD+S LRR + A ++GN SVLVGDFL S+AF M++E + Sbjct: 72 VIEFIHTATLLHDDVVDESELRRNRETANALFGNAASVLVGDFLYSRAFQMMVEVDNMRV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ T+AEGE+ QL ++ V+EE+YL VI+ KTA LF AA + +++ + Sbjct: 132 MQVLADATNTIAEGEVLQLLNCRDPQVSEENYLQVIRFKTAKLFEAASRLGAILGNATSE 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A+ YGM+LG AFQLVDD+LDY G +++GKN+G+D GKPTLP+I A + GT+ + Sbjct: 192 EENAMAVYGMHLGTAFQLVDDMLDYSGNNHDIGKNLGDDLTEGKPTLPLIYAMRTGTQEQ 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 N + I DG + + ++R+ AL + A + A ++ LPDS KK Sbjct: 252 ANIIRKAIEDG--GKDGFQPVLNVIRQTAALEYAKKCAEAEVTTAVAAIATLPDSENKKC 309 Query: 310 LMEVVDFCLQR 320 L+++ F + R Sbjct: 310 LLQLASFAVTR 320 >gi|118602394|ref|YP_903609.1| dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567333|gb|ABL02138.1| Dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 323 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 143/323 (44%), Positives = 200/323 (61%), Gaps = 5/323 (1%) Query: 1 MKMLEDLT--LK-DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 MK L D+ LK D++K + +++ R+ S+V +I + Y+I +GGKRLRP+L L A Sbjct: 1 MKSLSDIQSLLKLDLQKTDEILINRLSSNVALINQMGHYIIHAGGKRLRPLLLLLCARAT 60 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 EY+G +H L+A IE IHTATLLHDD+VD+S RRGK VWGN SVLVGDFL S+A Sbjct: 61 EYQGTHHYLMAVVIELIHTATLLHDDIVDESITRRGKDTVNEVWGNAPSVLVGDFLYSRA 120 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 F M+IE S + LS ++AEGE+ QL KN ++TE +Y VI+ KTA LF AA Sbjct: 121 FEMMIEPNSMYIIRILSKTTNSIAEGEVLQLLNCKNTELTETEYYAVIERKTACLFQAAT 180 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ L++GV + ALK YG++LG AFQ++DDVLDY V MGK +G+D GK TLP Sbjct: 181 QIGGLLSGVDKAQESALKDYGLHLGNAFQIIDDVLDYESNVKTMGKEVGDDLSEGKTTLP 240 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 +I A + + + IN S + + I++ +A T +A+ Q AK S Sbjct: 241 MIYALAHTSGDNRQLLEDAINQADNS--KIVQVIKILQSIKAFDYTRNQAHKSAQLAKQS 298 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L+ +PDS +K +L+ + D LQR Sbjct: 299 LKLIPDSDYKDALILLCDLSLQR 321 >gi|123440796|ref|YP_001004787.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087757|emb|CAL10543.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 323 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 131/315 (41%), Positives = 189/315 (60%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DLT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+G H+ Sbjct: 8 DLTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALGYQGTKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ + Sbjct: 68 TVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMMTSLE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + +++++ Sbjct: 128 SLRVLTLMSDATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSAAVLSD 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ A G Sbjct: 188 ATEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLHAMHNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + + I +G L+ + M++ +L T RA KA +L+ LP+S Sbjct: 248 TPEQAAMIRQAIEEGN-GRHLLEPVLVAMQQCGSLDYTRQRAEEEADKAIAALQVLPESD 306 Query: 306 WKKSLMEVVDFCLQR 320 ++ +L + +QR Sbjct: 307 YRLALEGLAHIAVQR 321 >gi|291615993|ref|YP_003518735.1| IspB [Pantoea ananatis LMG 20103] gi|291151023|gb|ADD75607.1| IspB [Pantoea ananatis LMG 20103] gi|327396245|dbj|BAK13667.1| octaprenyl-diphosphate synthase IspB [Pantoea ananatis AJ13355] Length = 323 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + +A + Y+ Sbjct: 3 LEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISGGGKRIRPMIAVLSARAMGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDLHVTNAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSMGSLRILALMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAASQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAEATPAQEKALQDYGRYLGTAFQLIDDLLDYSADGETLGKNTGDDLSEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G+ + + I G L M + +L T RA KA +L+ Sbjct: 243 AMNHGSPEQAKMIRDAIEQGN-GRHLLAPVLEAMNQCGSLEWTRQRAEQEADKAIAALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ W+ +L + +QR Sbjct: 302 LPETPWRSALEALAHMSVQR 321 >gi|15602211|ref|NP_245283.1| IspB [Pasteurella multocida subsp. multocida str. Pm70] gi|12720590|gb|AAK02430.1| IspB [Pasteurella multocida subsp. multocida str. Pm70] Length = 330 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 130/317 (41%), Positives = 191/317 (60%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L +DM+K N IL ++ SDV +I + Y+I SGGKR+RPM+ + A L + G+ Sbjct: 13 IQKLIHRDMQKTNETILAQLNSDVTLINQLGYYIIQSGGKRIRPMIAILAARALGFHGEQ 72 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A IEFIHTATLLHDDVVD+SALRRG A +GN SVLVGDF+ ++AF ++ + Sbjct: 73 PITCATFIEFIHTATLLHDDVVDESALRRGNPTANAEFGNAASVLVGDFIYTRAFQLMTQ 132 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S L+ +S +AEGE++QL + + TEE+Y+ VI KTA LF AA ++++ Sbjct: 133 LDSLRILKVMSDATNVIAEGEVQQLMNVNDPNTTEENYMQVIYGKTARLFEAATHCAAIL 192 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + AL+ YG LG AFQLVDD+LDY + +GKNIG+D GKPTLP++ A Sbjct: 193 AHATEAQENALREYGCYLGTAFQLVDDILDYSADAQALGKNIGDDLAEGKPTLPLLHAMH 252 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G + + I G + L+ IM E+++L RA QKA D++ LP+ Sbjct: 253 HGNPAQAKLIREAIEQGG-KRDILEDVLTIMTEHKSLDYAMMRAKQEAQKAVDAIALLPE 311 Query: 304 SSWKKSLMEVVDFCLQR 320 + +K++L+ + + R Sbjct: 312 NEYKQALISLAYLSVDR 328 >gi|170717395|ref|YP_001783470.1| polyprenyl synthetase [Haemophilus somnus 2336] gi|168825524|gb|ACA30895.1| Polyprenyl synthetase [Haemophilus somnus 2336] Length = 330 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 131/317 (41%), Positives = 192/317 (60%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ SGGKR+RPM+ L A L Y+GD Sbjct: 13 IQSLIKTDMDKVNATILAQLNSDVALINQLGYYIVQSGGKRIRPMIALLAARALNYQGDE 72 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTATLLHDDVVD+S +RRG A +GN SVLVGDF+ ++AF ++ + Sbjct: 73 PITCAAFVEFIHTATLLHDDVVDESDMRRGNPTANAEFGNAASVLVGDFIYTRAFQLMTK 132 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S L+ +S +AEGE++QL + + +E++Y+ VI SKTA LF A + +++ Sbjct: 133 LNSLRILQIMSDATNIIAEGEVQQLMNVNDPETSEDNYMKVIYSKTARLFEVATQCAAIT 192 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A AL+ YG LG AFQLVDDVLDY +GKNIG+D GKPTLP++ A + Sbjct: 193 AQSNAEQEIALQHYGRYLGTAFQLVDDVLDYSANAATLGKNIGDDLAEGKPTLPLLHAMR 252 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 GT ++ + I G + L IM E ++L +A QKA DS+ CLP+ Sbjct: 253 NGTPQQSALIREAIEQGG-KRDFLDDVLAIMTEQKSLDYAMSKAKEEAQKAVDSISCLPE 311 Query: 304 SSWKKSLMEVVDFCLQR 320 + +K++L+ + ++R Sbjct: 312 NQYKQALISLAYLSVER 328 >gi|254372879|ref|ZP_04988368.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. novicida GA99-3549] gi|151570606|gb|EDN36260.1| octaprenyl-diphosphate synthase [Francisella novicida GA99-3549] Length = 325 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 135/326 (41%), Positives = 200/326 (61%), Gaps = 8/326 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQNSVRQA---LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQGYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKD 296 I A T++++ K I G+ ++ + I M ++ VD Y+ A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEYRIDQI----IAMVKDSGAVDYSYKVACQYADLAKQ 299 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 300 QIDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|238793005|ref|ZP_04636634.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909] gi|238727605|gb|EEQ19130.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909] Length = 323 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 132/315 (41%), Positives = 188/315 (59%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y GD H+ Sbjct: 8 ELTAPDMANVNTTILNQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALHYEGDKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ + Sbjct: 68 TVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMMTGLE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + ++++A Sbjct: 128 SLRVLTLMSEATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSAAVLAD 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ A G Sbjct: 188 ATETQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLHAMHNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + + I G L+ M++ +L T RA KA +L+ LP+S Sbjct: 248 TVEQAAMIRQAIEQGN-GRHLLEPVLAAMQQCGSLDYTRRRAEEEADKAIAALQILPESE 306 Query: 306 WKKSLMEVVDFCLQR 320 ++ +L + +QR Sbjct: 307 YRLALEGLAHIAVQR 321 >gi|251791050|ref|YP_003005771.1| octaprenyl diphosphate synthase [Dickeya zeae Ech1591] gi|247539671|gb|ACT08292.1| Trans-hexaprenyltranstransferase [Dickeya zeae Ech1591] Length = 323 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L+ +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQITALSAQDMAAVNQTILDQLNSDVVLINQLGNYIIGGGGKRIRPMIAVLAARALSYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + +S +AEGE+ QL + D+TE+ Y+ VI SKTA LF AA + S Sbjct: 123 MTSLASLRVMSVMSDAVNVIAEGEVLQLMNCNDPDITEDSYMRVIYSKTARLFEAAAQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILSDASSEQELALQEYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + ++ + I G L+ M+ +L T RA KA +++C Sbjct: 243 AMHHGNEEQRIMIRQAIEQGN-GRHLLEPVLAAMQSCGSLAYTRQRAEEEADKAITAIQC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + +QR Sbjct: 302 LPASDFRTALEGLAHLAVQR 321 >gi|149912227|ref|ZP_01900805.1| octaprenyl-diphosphate synthase [Moritella sp. PE36] gi|149804686|gb|EDM64738.1| octaprenyl-diphosphate synthase [Moritella sp. PE36] Length = 323 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L+ +DM+ VN LIL R+ SDV ++ V Y++ GGKR+RP++ +A L Y+ Sbjct: 3 IKAIQALSKQDMDAVNELILARLQSDVALVNQVGYYIVNGGGKRIRPLIATLSARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHT+TLLHDDVVD+S +RRG+ A +GN SVLVGDFL S++F M Sbjct: 63 GQQHVDVAAIIEFIHTSTLLHDDVVDESDMRRGRKTANAAFGNAASVLVGDFLYSRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + + + ++ LS +AEGE+ QL + D E+ Y+ VI KTA LF AA +++ Sbjct: 123 MAKLNNSKIIDILSDATNVIAEGEVLQLMNCNDADTDEKRYMDVIYYKTAKLFEAATQLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IA + QA+ YG++LG AFQL+DDV+DY + EMGKN+G+D GKPTLP+I Sbjct: 183 AVIAEQPADIEQAMIDYGVHLGAAFQLIDDVMDYTSDAQEMGKNVGDDLAEGKPTLPLIH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT++E + I ++NL+ I+ N +L +A + A ++ Sbjct: 243 AMAHGTEQEALMVREAIEKMN-GMDNLEAILAILERNGSLNYCFDKAQQEAELAVKAIAV 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+S +K++L+ + R N Sbjct: 302 LPESEYKQALISLAYIAANRSN 323 >gi|56708131|ref|YP_170027.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670602|ref|YP_667159.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis FSC198] gi|134301942|ref|YP_001121911.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|208779313|ref|ZP_03246659.1| polyprenyl synthetase family protein [Francisella novicida FTG] gi|224457222|ref|ZP_03665695.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254370617|ref|ZP_04986622.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874931|ref|ZP_05247641.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|56604623|emb|CAG45677.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320935|emb|CAL09060.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis FSC198] gi|134049719|gb|ABO46790.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151568860|gb|EDN34514.1| hypothetical protein FTBG_00405 [Francisella tularensis subsp. tularensis FSC033] gi|208745113|gb|EDZ91411.1| polyprenyl synthetase family protein [Francisella novicida FTG] gi|254840930|gb|EET19366.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159332|gb|ADA78723.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis NE061598] Length = 325 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 136/326 (41%), Positives = 201/326 (61%), Gaps = 8/326 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIA-GVQNSVRQA--LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ Q+ + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKD 296 I A T++++ K I G+ ++ + I M ++ VD Y+ A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEYRIDEI----IAMVKDSGAVDYSYKVACQYADLAKQ 299 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 300 QIDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|271499159|ref|YP_003332184.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586] gi|270342714|gb|ACZ75479.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586] Length = 323 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 188/320 (58%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L+ +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQITALSAQDMAAVNQTILDQLNSDVVLINQLGNYIIGGGGKRIRPMIAVLAARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + +S +AEGE+ QL + D+TE+ Y+ VI SKTA LF AA + S Sbjct: 123 MTSLASLRVMSVMSDAVNVIAEGEVLQLMNCNDPDITEDSYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILSDASSEQELALQEYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G ++ + I G L+ M+ +L T RA KA +++C Sbjct: 243 AMHHGNDEQRTMIRQAIEQGN-GRHLLEPVLAAMQSCGSLTYTRQRAEEEADKAITAIQC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + +QR Sbjct: 302 LPASDFRTALEGLAHLAVQR 321 >gi|254369351|ref|ZP_04985363.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp. holarctica FSC022] gi|157122301|gb|EDO66441.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp. holarctica FSC022] Length = 325 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 136/326 (41%), Positives = 201/326 (61%), Gaps = 8/326 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIA-GVQNSVRQA--LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ Q+ + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKD 296 I A T++++ K I G+ ++ + I M ++ VD Y+ A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEYRIDEI----IAMVKDSGAVDYSYKVACQYADLAKQ 299 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 300 QIDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|51594815|ref|YP_069006.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP 32953] gi|153949434|ref|YP_001402567.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP 31758] gi|170025973|ref|YP_001722478.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis YPIII] gi|186893824|ref|YP_001870936.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis PB1/+] gi|51588097|emb|CAH19703.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP 32953] gi|152960929|gb|ABS48390.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP 31758] gi|169752507|gb|ACA70025.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII] gi|186696850|gb|ACC87479.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+] Length = 323 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 131/315 (41%), Positives = 184/315 (58%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+G H+ Sbjct: 8 ELTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALNYQGSKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ + Sbjct: 68 TVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMMTGLQ 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L +S +AEGE+ QL N D+TEE Y+ VI SKTA LF AA + +++++ Sbjct: 128 SMRVLTLMSEATNVIAEGEVLQLMNCNNPDITEESYMQVIYSKTARLFEAAAQSAAILSD 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL++YG LG AFQL+DD+LDY E + +GKN G+D GKPTLP++ A G Sbjct: 188 ASEEQELALQNYGRYLGTAFQLIDDLLDYSAEGSTLGKNTGDDLNEGKPTLPLLHAMHNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + + I G L+ M +LV T RA KA +L LP+S Sbjct: 248 TPEQAAMIRQAIEQGN-GRHLLEPVLAAMEHCGSLVYTRQRAEEEADKAIAALHALPESD 306 Query: 306 WKKSLMEVVDFCLQR 320 ++ +L + + R Sbjct: 307 YRLALEGLAHISVHR 321 >gi|113460390|ref|YP_718452.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT] gi|112822433|gb|ABI24522.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT] Length = 326 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 131/317 (41%), Positives = 192/317 (60%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ SGGKR+RPM+ L A L Y+GD Sbjct: 9 IQSLIKTDMDKVNATILAQLNSDVALINQLGYYIVQSGGKRIRPMIALLAARALNYQGDE 68 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTATLLHDDVVD+S +RRG A +GN SVLVGDF+ ++AF ++ + Sbjct: 69 PITCAAFVEFIHTATLLHDDVVDESDMRRGNPTANAEFGNAASVLVGDFIYTRAFQLMTK 128 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S L+ +S +AEGE++QL + + +E++Y+ VI SKTA LF A + +++ Sbjct: 129 LNSLRILQIMSDATNIIAEGEVQQLMNVNDPETSEDNYMKVIYSKTARLFEVATQCAAIT 188 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A AL+ YG LG AFQLVDDVLDY +GKNIG+D GKPTLP++ A + Sbjct: 189 AQSNAEQEIALQHYGRYLGTAFQLVDDVLDYSANAATLGKNIGDDLAEGKPTLPLLHAMR 248 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 GT ++ + I G + L IM E ++L +A QKA DS+ CLP+ Sbjct: 249 NGTPQQSALIREAIEQGG-KRDFLDDVLAIMTEQKSLDYAMSKAKEEAQKAVDSISCLPE 307 Query: 304 SSWKKSLMEVVDFCLQR 320 + +K++L+ + ++R Sbjct: 308 NQYKQALISLAYLSVER 324 >gi|292486819|ref|YP_003529689.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430] gi|292900783|ref|YP_003540152.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946] gi|291200631|emb|CBJ47763.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946] gi|291552236|emb|CBA19273.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430] gi|312170887|emb|CBX79146.1| octaprenyl diphosphate synthase [Erwinia amylovora ATCC BAA-2158] Length = 324 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 136/321 (42%), Positives = 194/321 (60%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEY 59 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ LA + +Y Sbjct: 3 LEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAINDY 62 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF Sbjct: 63 AGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 122 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + Sbjct: 123 MMTSLGSLKVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQS 182 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+++AG + QAL+ YG +G AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 SAILAGASATEEQALQDYGRYIGTAFQLIDDLLDYSADGETLGKNVGDDLSEGKPTLPLL 242 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + GT + + +S I +G L+ M + +L T A KA +L Sbjct: 243 HAMRNGTPEQASMIRSAIEEGN-GRHLLESVLETMNQCGSLEWTRNAAEKEADKAIAALA 301 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LPDS W+ +L + +QR Sbjct: 302 ALPDSPWRSALEALAHMSVQR 322 >gi|213971072|ref|ZP_03399192.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato T1] gi|301384205|ref|ZP_07232623.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato Max13] gi|302060871|ref|ZP_07252412.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato K40] gi|302132864|ref|ZP_07258854.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924180|gb|EEB57755.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato T1] gi|331018359|gb|EGH98415.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 322 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 129/314 (41%), Positives = 193/314 (61%), Gaps = 6/314 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDIRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S E + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMEVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + + Sbjct: 133 KILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + G+ + Sbjct: 193 TEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQA 252 Query: 251 NFWKSTINDGKIS-VENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLPDSSWKK 308 + I G + +E+++ A EN +D T A Y +A L LP S ++ Sbjct: 253 ALVRQAIQKGGLEDLESIRNAV----ENAGALDYTAQLARDYAARAIACLDALPPSEYRD 308 Query: 309 SLMEVVDFCLQRLN 322 +L+E+ +F + R + Sbjct: 309 ALIELSEFAVARTH 322 >gi|194290791|ref|YP_002006698.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424] gi|193224626|emb|CAQ70637.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424] Length = 345 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 134/310 (43%), Positives = 191/310 (61%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L TA L Y G+ H LA Sbjct: 36 DMRAVDAVIRQRLSSEVPLIEQIGEYIIGAGGKRLRPVILLLTARALGYDGNRHHELAAV 95 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S + Sbjct: 96 VEFIHTATLLHDDVVDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMVDAGSMRIM 155 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS +AEGE+ QL + DVT E YL VI+ KTA LF AA ++ ++++G + Sbjct: 156 EILSNATNVIAEGEVLQLLNMHDPDVTVERYLQVIRYKTAKLFEAAAQLGAVLSGADAQM 215 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++ + GT ++ Sbjct: 216 EEAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLMEHGTAEQR 275 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G E+ F + + AL T A + A+ + R P S+ K++L Sbjct: 276 QLARDAIVQG--GTEHFDAVFAAIHASGALEVTFEAARREAEAAEQAARQFPPSALKETL 333 Query: 311 MEVVDFCLQR 320 +++ F LQR Sbjct: 334 IQLCAFSLQR 343 >gi|62260098|gb|AAX77879.1| unknown protein [synthetic construct] Length = 360 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 136/326 (41%), Positives = 201/326 (61%), Gaps = 8/326 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 30 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 89 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 90 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 149 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 150 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 209 Query: 181 SLIA-GVQNSVRQA--LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ Q+ + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 210 GVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 269 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKD 296 I A T++++ K I G+ ++ + I M ++ VD Y+ A Y AK Sbjct: 270 TIYALANVTEQQQQILKKAIEKGEYRIDEI----IAMVKDSGAVDYSYKVACQYADLAKQ 325 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 326 QIDFLPDSEYKQAMILLCDLAVNRKN 351 >gi|238797569|ref|ZP_04641066.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969] gi|238718566|gb|EEQ10385.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969] Length = 323 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 131/315 (41%), Positives = 190/315 (60%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT DM VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+G H+ Sbjct: 8 ELTAPDMAAVNTTILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALHYQGTKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ + Sbjct: 68 TVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMMTGLE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + ++++A Sbjct: 128 SLRVLTLMSEATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSAAVLAN 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ A + G Sbjct: 188 ASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLHAMRNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T ++ + I G L+ M++ +L T RA KA +L+ LP+S Sbjct: 248 TSEQEAMIRQAIEQGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAIAALQILPESE 306 Query: 306 WKKSLMEVVDFCLQR 320 ++ +L + +QR Sbjct: 307 YRLALEGLAHIAVQR 321 >gi|293602311|ref|ZP_06684757.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC 43553] gi|292819073|gb|EFF78108.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC 43553] Length = 321 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 131/310 (42%), Positives = 189/310 (60%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ V+ +I +R+ SDV +I + Y+I +GGKR+RP + L A L Y G +H LLA Sbjct: 13 DMKAVDAVIRERLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYEGTHHQLLAAV 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M++E S + Sbjct: 73 VEFIHTATLLHDDVVDESDLRRGRETANAVFGNAASVLVGDYLYSRSFEMMVEADSMRIM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS +AEGE+ QL + DV+++ YL V++ KTA LF AA +V +++AG Sbjct: 133 SILSEATTVIAEGEVLQLLNVHDPDVSQDRYLQVVRYKTAKLFEAAAQVGAVLAGATPEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A +YG ++G AFQLVDDVLDY G+ +GKN+G+D R GKPTLP+I + GT +++ Sbjct: 193 EAAAAAYGRHVGTAFQLVDDVLDYSGDAAALGKNVGDDLREGKPTLPLIRVMEVGTPQQQ 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G + A ++ AL A + +A+++L P S + SL Sbjct: 253 QLIRDAIKTGDADFAAVAAA---IQATDALEHARLAAVAEADRAREALSIYPVSPFLNSL 309 Query: 311 MEVVDFCLQR 320 +E F + R Sbjct: 310 LEFCAFAVNR 319 >gi|332528440|ref|ZP_08404432.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624] gi|332042119|gb|EGI78453.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624] Length = 316 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 122/249 (48%), Positives = 166/249 (66%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M +V+ +I +R+ S V ++ V +Y+I +GGKRLRP L L + L+YRG + LA + Sbjct: 1 MREVDRVISERLDSGVPLVGQVARYIIGAGGKRLRPALLLLVSGALDYRGPHRHSLAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVDDS LRRG A +GN SVLVGDFL S+AF M++E +S +E Sbjct: 61 EFIHTATLLHDDVVDDSKLRRGNPTANETFGNAASVLVGDFLYSRAFQMMVEAQSMRVME 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ +AEGE++QL N D+ E Y+HVI+SKTA LF A+ +++AG ++ Sbjct: 121 VLAEATNVIAEGEVQQLMNMHNADLNEAGYVHVIRSKTAKLFEASARCGAILAGADKTLE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 A YG LG AFQ++DDVLDY G+ + MGK++G+D R GK TLP+I A QRGT+ E+ Sbjct: 181 AACADYGQALGTAFQVIDDVLDYAGDAHVMGKSLGDDLREGKATLPLIAAMQRGTESERQ 240 Query: 252 FWKSTINDG 260 +S I G Sbjct: 241 RIRSAIESG 249 >gi|52425655|ref|YP_088792.1| IspA protein [Mannheimia succiniciproducens MBEL55E] gi|52307707|gb|AAU38207.1| IspA protein [Mannheimia succiniciproducens MBEL55E] Length = 358 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 128/320 (40%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM+KVN IL ++ SDV +I + Y+I SGGKR+RPM+ A L Y+ Sbjct: 38 IKTIQALVSDDMQKVNEEILAQLNSDVPLINQLGYYIIHSGGKRIRPMIANLAAKALNYQ 97 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + H+ A IEF+HTATLLHDDVVD+S +RRG A +GN SVLVGD++ +++F M Sbjct: 98 DNKHITCAAFIEFLHTATLLHDDVVDESDMRRGNPTANAEFGNAASVLVGDYMHTRSFQM 157 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S L+ +S +AEGE++QL ++ D TE++Y+ VI SKTA LF + + Sbjct: 158 MTELGSLRILQVMSAATNVIAEGEVQQLMNVRDPDTTEQNYMKVIYSKTARLFEVSTQTV 217 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A ++ + L++YG LG AFQLVDD+LDY +GKNIG+D GKPTLP++ Sbjct: 218 AILADAGAAIEEGLQNYGRYLGTAFQLVDDILDYSANAATLGKNIGDDLAEGKPTLPLLH 277 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G ++ ++ I G + + L + IM E+++L A QKA D+L Sbjct: 278 AMRHGNPQQAELIRNIILQGG-NRDALDEVLTIMHEHKSLDYAMEHAKQEAQKAVDALAP 336 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ +K++++ + + R Sbjct: 337 LPDNIYKRAMISLAYLSVDR 356 >gi|163858994|ref|YP_001633292.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM 12804] gi|163262722|emb|CAP45025.1| putative octaprenyl-diphosphate synthase [Bordetella petrii] Length = 308 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 129/309 (41%), Positives = 192/309 (62%), Gaps = 3/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+ V+ +I R+ S+V +I + Y+I +GGKR+RP + L A L Y+G++H LLA + Sbjct: 1 MKAVDAVIRGRLDSEVVLIRTIADYIIGAGGKRMRPAMVLMMARALGYQGEHHRLLAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++E S ++ Sbjct: 61 EFIHTATLLHDDVVDESDLRRGRETANAMFGNAASVLVGDYLYSRSFEMMVEAGSMRIMQ 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS +AEGE+ QL + DV++ YL V++ KTA LF AA +V +++AG Sbjct: 121 ILSEATTIIAEGEVLQLLNVHDPDVSQARYLQVVRYKTAKLFEAAAQVGAVLAGASPEQE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A +YG ++G AFQLVDDVLDY G+ +GKN+G+D R GKPTLP+I + G +++ Sbjct: 181 EAAAAYGRHIGTAFQLVDDVLDYSGDAQALGKNVGDDLREGKPTLPLIRVMETGAPQQRE 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 ++ I G + +A ++ AL A + A+ +L LP S ++KSL+ Sbjct: 241 LIRNAIKTGDADFAAVAQA---IQATDALEHARQAALAEADAARQALAGLPISVYQKSLL 297 Query: 312 EVVDFCLQR 320 E F + R Sbjct: 298 EFCAFAVNR 306 >gi|261378364|ref|ZP_05982937.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685] gi|269145472|gb|EEZ71890.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685] Length = 324 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 136/332 (40%), Positives = 208/332 (62%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQKHLSEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGRS 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDNEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE+Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEEYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V S++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTL Sbjct: 181 AQVGSILGNAPPECEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND ++++EN +++ + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRLALENADRSY-FAKIHEYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L LPDS K++++ + L R++ Sbjct: 293 VDCAIAALDTLPDSEAKEAMIRLAQESLVRVS 324 >gi|113869207|ref|YP_727696.1| trans-hexaprenyltranstransferase [Ralstonia eutropha H16] gi|113527983|emb|CAJ94328.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha H16] Length = 328 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 134/310 (43%), Positives = 190/310 (61%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L TA + Y G+ H LA Sbjct: 19 DMRAVDAVIRQRLSSEVPLIEQIGEYIIGAGGKRLRPVILLLTARAMGYDGNRHHELAAV 78 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S + Sbjct: 79 VEFIHTATLLHDDVVDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMVDAGSMRIM 138 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS +AEGE+ QL + DVT E YL VI+ KTA LF AA ++ +++AG + Sbjct: 139 EILSNATNVIAEGEVLQLLNMHDPDVTVERYLQVIRYKTAKLFEAAAQLGAVLAGADAQM 198 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++ + GT ++ Sbjct: 199 EEAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLLEHGTPEQR 258 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G E+ F + + AL T A + A+ + R P S K++L Sbjct: 259 QLARDAIVRG--GTEHFDAVFAAIHASGALDVTFEAARREAEAAEQAARQFPPSELKETL 316 Query: 311 MEVVDFCLQR 320 +++ F LQR Sbjct: 317 IQLCAFSLQR 326 >gi|160871595|ref|ZP_02061727.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella grylli] gi|159120394|gb|EDP45732.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella grylli] Length = 322 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 130/314 (41%), Positives = 189/314 (60%), Gaps = 2/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L KD+++V+ LI + + +D+ +IP + K+LI SGGKRLRP++ L +A Y+G H Sbjct: 9 LVKKDLDEVDALINRCLYADIPLIPQLAKHLINSGGKRLRPLIALLSAKAFGYQGKEHRR 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA ++E IH ATLLHDDV+D S LRRGK A +WGN SVLVGDFL S+AF ++ + + Sbjct: 69 LAASLELIHGATLLHDDVIDGSVLRRGKKTANSLWGNSASVLVGDFLYSRAFQLISQINN 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L +L+ TLA+ E+ QL N+DV E L VI+ KT VLFS A E +++ Sbjct: 129 SRVLTSLADATNTLAQSEVLQLINCYNVDVDEAYCLKVIQGKTGVLFSIAAEQPAMLTER 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + A+ YGM+LGIAFQL+DD LDY G+ ++GK++G D GKPTLP+I A Q + Sbjct: 189 PEAEISAMAHYGMHLGIAFQLIDDSLDYSGDPQQLGKSLGNDLSEGKPTLPIIYALQHAS 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + K+ + G L I++ AL T A Y +K+ L +PDS + Sbjct: 249 AEQAQLLKTALTQG--DQNKLMTIIPILQSTSALEYTRTLARHYIEKSLTYLNLIPDSDY 306 Query: 307 KKSLMEVVDFCLQR 320 +++L + F ++R Sbjct: 307 RQALAHLTTFAIER 320 >gi|152985492|ref|YP_001350541.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7] gi|150960650|gb|ABR82675.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7] Length = 322 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 127/313 (40%), Positives = 191/313 (61%), Gaps = 2/313 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L L Y+GD+ LLA Sbjct: 12 EDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKGDDLCLLAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEF+HT+TLLHDDVVD S LRRG+ A +WGN SVLVGDFL +++F M++E S Sbjct: 72 TIEFLHTSTLLHDDVVDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMMVELGSMPV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + Sbjct: 132 MRIISQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALCRAGEE 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AL+ +G LGIAFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I+ + GT+ + Sbjct: 192 QAEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVTMRDGTEEQ 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G ++L+ + AL T A Y +A L LPD+ ++ + Sbjct: 252 AALVRKAIQQG--GSQDLESVCAAVEAAGALDYTANLARDYAARAIACLESLPDNEYRAA 309 Query: 310 LMEVVDFCLQRLN 322 L+E+ +F + R + Sbjct: 310 LVELSEFAVARTH 322 >gi|121998628|ref|YP_001003415.1| trans-hexaprenyltranstransferase [Halorhodospira halophila SL1] gi|121590033|gb|ABM62613.1| Trans-hexaprenyltranstransferase [Halorhodospira halophila SL1] Length = 323 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 132/321 (41%), Positives = 191/321 (59%), Gaps = 3/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +L DM +VN LI +R+ SDV +I + +++ SGGKRLRPM+ L A Y+ Sbjct: 3 LDAIRELAADDMAEVNRLIEERLSSDVVLINQLAYHIVHSGGKRLRPMVVLLAARACGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +HV LA IEFIHTATLLHDDVVD S +RRGK A +WGN+ SVLVGDFL ++AF M Sbjct: 63 GKDHVQLAAIIEFIHTATLLHDDVVDGSDMRRGKQTAHTIWGNEASVLVGDFLYTRAFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S L L+ T+A GE+ QL D+TE DY VI KTA LF A + Sbjct: 123 MVELDSMAVLRILARATNTIARGEVMQLMNVHEPDLTEADYRQVIYRKTATLFEAGCQNG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG+ ++ +AL +YG +LG A+QLVDD LDY G+ +E+GKNIG+D GK T+P+I Sbjct: 183 AVLAGLDDAGCEALAAYGRHLGTAYQLVDDALDYSGDASEIGKNIGDDLAEGKTTMPLIH 242 Query: 241 AFQRGTKREKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + G +++ + I G + +E + +A I + A Q + Sbjct: 243 AMREGEPADRDLIRQAIEAGGLDQMEAVGRA--IEKTGSAEYTRRLAEVEVEQAVEQLTS 300 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 +P S W+ +L+ + + R Sbjct: 301 AVPGSPWRDALVHLARNSISR 321 >gi|238761751|ref|ZP_04622725.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638] gi|238699865|gb|EEP92608.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638] Length = 323 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 130/315 (41%), Positives = 189/315 (60%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DLT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+G H+ Sbjct: 8 DLTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALGYQGTKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ + Sbjct: 68 TVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMMTSLE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + +++++ Sbjct: 128 SLRVLTLMSAATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSAAILSD 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 L++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ A + G Sbjct: 188 ATPEQELTLQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLHAMRNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + + I +G L+ + M++ +L T RA KA +L+ LP+S Sbjct: 248 TSEQAAMIRQAIEEGN-GRHLLEPVLVAMQQCGSLDYTRQRAEEEADKAIAALQILPESE 306 Query: 306 WKKSLMEVVDFCLQR 320 ++ +L + +QR Sbjct: 307 YRLALEGLAHIAVQR 321 >gi|254495951|ref|ZP_05108859.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii LLAP12] gi|254354829|gb|EET13456.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii LLAP12] Length = 322 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 127/312 (40%), Positives = 198/312 (63%), Gaps = 2/312 (0%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 + D VN LI+ +I S + +I D+ ++I SGGKRLRP+L L + Y+G+ H+ LA Sbjct: 11 IDDFNAVNALIVNKIESQIGLIDDMSHHVIESGGKRLRPLLVLLASNACSYQGNAHIALA 70 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EF HTATLLHDDVVD+S LRRG+ A +WG++ S+LVGD+L +Q+ +++++ + Sbjct: 71 AMVEFFHTATLLHDDVVDESTLRRGRETANNIWGSKASILVGDYLFTQSIELMVDSGNPA 130 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L+ + A ++ GE++QLS N +T E+Y VI++KTA+LF+AA + +++ Sbjct: 131 ILKLFANTALEISCGEVKQLSNRHNPALTFEEYFDVIRAKTALLFAAAACIGPMLSDASK 190 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 V+ +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I A Q G++R Sbjct: 191 EVQDSLYAYGLHLGNAFQLIDDALDYCSDAKTIGKNIGDDLADGKATLPLIHALQHGSER 250 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 +K ++ G S+E L + I + E +A+ T+ A A L LPDS +K Sbjct: 251 QKQQIIESLKKG--SLEFLPEILIALEETKAIEYTKKVAAQEIDTALSFLMVLPDSKYKN 308 Query: 309 SLMEVVDFCLQR 320 +L ++ F LQR Sbjct: 309 ALTQLAQFALQR 320 >gi|15599765|ref|NP_253259.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1] gi|107099768|ref|ZP_01363686.1| hypothetical protein PaerPA_01000786 [Pseudomonas aeruginosa PACS2] gi|116052711|ref|YP_793028.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|218893664|ref|YP_002442533.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58] gi|254238683|ref|ZP_04932006.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719] gi|254244534|ref|ZP_04937856.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192] gi|296391383|ref|ZP_06880858.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAb1] gi|313107214|ref|ZP_07793413.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016] gi|9950815|gb|AAG07957.1|AE004870_8 octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1] gi|115587932|gb|ABJ13947.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|126170614|gb|EAZ56125.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719] gi|126197912|gb|EAZ61975.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192] gi|218773892|emb|CAW29706.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58] gi|310879915|gb|EFQ38509.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016] Length = 322 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 127/313 (40%), Positives = 191/313 (61%), Gaps = 2/313 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L L Y+GD+ LLA Sbjct: 12 EDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKGDDLCLLAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEF+HT+TLLHDDVVD S LRRG+ A +WGN SVLVGDFL +++F M++E S Sbjct: 72 TIEFLHTSTLLHDDVVDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMMVELGSMPV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + Sbjct: 132 MRIISQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALCQAGEE 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AL+ +G LGIAFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I+ + GT+ + Sbjct: 192 QSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVTMRDGTEEQ 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G ++L+ + AL T A Y +A L LPD+ ++ + Sbjct: 252 AALVRKAIQQG--GSQDLESVCAAVEAAGALDYTANLARDYAARAIACLDTLPDNEYRSA 309 Query: 310 LMEVVDFCLQRLN 322 L+E+ +F + R + Sbjct: 310 LVELSEFAVARTH 322 >gi|49083716|gb|AAT51120.1| PA4569 [synthetic construct] Length = 323 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 127/313 (40%), Positives = 191/313 (61%), Gaps = 2/313 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L L Y+GD+ LLA Sbjct: 12 EDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKGDDLCLLAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEF+HT+TLLHDDVVD S LRRG+ A +WGN SVLVGDFL +++F M++E S Sbjct: 72 TIEFLHTSTLLHDDVVDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMMVELGSMPV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + Sbjct: 132 MRIISQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALCQAGEE 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AL+ +G LGIAFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I+ + GT+ + Sbjct: 192 QSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVTMRDGTEEQ 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G ++L+ + AL T A Y +A L LPD+ ++ + Sbjct: 252 AALVRKAIQQG--GSQDLESVCAAVEAAGALDYTANLARDYAARAIACLDTLPDNEYRSA 309 Query: 310 LMEVVDFCLQRLN 322 L+E+ +F + R + Sbjct: 310 LVELSEFAVARTH 322 >gi|254293445|ref|YP_003059468.1| trans-hexaprenyltranstransferase [Hirschia baltica ATCC 49814] gi|254041976|gb|ACT58771.1| Trans-hexaprenyltranstransferase [Hirschia baltica ATCC 49814] Length = 340 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 139/321 (43%), Positives = 198/321 (61%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L +L +D+ V L+ +R S V IPD+ YLI +GGKRLRP++TLA A + Sbjct: 18 MDTLTELVAEDLSSVEALLSERAISSVATIPDMSAYLIGAGGKRLRPLITLAAAYAAGGK 77 Query: 61 GDNHVL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G + LA A+E+IHTATLLHDDVVD+S LRRGK AA+++WGN S+LVGDFL ++AF Sbjct: 78 GSAPLHSLAAAVEYIHTATLLHDDVVDESDLRRGKKAAKMLWGNSASILVGDFLFARAFT 137 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 +++ET+S L+ LS +C +AEGE++QL+ D+ EDY+ ++++KTA LF AA Sbjct: 138 LMVETRSLRILDILSNASCVIAEGEVKQLAAIGKADLPIEDYMDIVEAKTAALFEAAARA 197 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +L + L YG LG AFQLVDD LDY G + +GK++G+DFR GK TLPV+ Sbjct: 198 GALTVVAEGKESDGLAEYGRRLGRAFQLVDDALDYDGSTSVIGKSVGDDFREGKLTLPVL 257 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 LA + G + FW ++ K + +L A +R+ + T A KAK +L Sbjct: 258 LAREHGDADARAFWDRAMDVSKQTEADLDIAIDYIRKADTVKATLDAARDEVAKAKAALE 317 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP S + +L ++ DF + R Sbjct: 318 VLPSSEYVDALADIADFVVDR 338 >gi|222109984|ref|YP_002552248.1| polyprenyl synthetase [Acidovorax ebreus TPSY] gi|221729428|gb|ACM32248.1| Polyprenyl synthetase [Acidovorax ebreus TPSY] Length = 327 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 126/274 (45%), Positives = 178/274 (64%), Gaps = 2/274 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM++V+ +I R+ S V ++ +V +Y+I +GGKRLRP L L + L Y G Sbjct: 14 LIADDMQEVDKVIASRLQSAVPLVGEVARYIISAGGKRLRPALLLLMSGALGYTGSQRFN 73 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL ++AF M++ET S Sbjct: 74 LAAVVEFIHTATLLHDDVVDESTLRRGRPTANENFGNPASVLVGDFLYTRAFQMMVETSS 133 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E L+ +AEGE++QL + + ++E YL+VI+SKTA LF A+ +++++A Sbjct: 134 LRVMEILAEATNVIAEGEVQQLMNTHDASLSESGYLNVIRSKTAKLFEASARLAAVLAAS 193 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + A SYG LG AFQ++DDVLDY G +EMGKN+G+D R GK TLP+I+A QRG Sbjct: 194 PPEIEHACASYGQALGTAFQVIDDVLDYDGNAHEMGKNLGDDLREGKVTLPLIIAMQRGN 253 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280 +E+ +S I G S + L I+++ AL Sbjct: 254 TQEQALLRSIIETG--STDELSSVISIIKKTGAL 285 >gi|28868024|ref|NP_790643.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato str. DC3000] gi|28851260|gb|AAO54338.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato str. DC3000] gi|330878952|gb|EGH13101.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966393|gb|EGH66653.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 322 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 128/312 (41%), Positives = 190/312 (60%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDIRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S E + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMEVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + + Sbjct: 133 KILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + G+ + Sbjct: 193 TEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L+ + AL T A Y +A L LP S ++ +L Sbjct: 253 ALVRQAIQKG--GLEDLESIRNAVESAGALDYTAQLARDYAARAIACLDALPPSEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 IELSEFAVARTH 322 >gi|325277088|ref|ZP_08142742.1| polyprenyl synthetase [Pseudomonas sp. TJI-51] gi|324097770|gb|EGB95962.1| polyprenyl synthetase [Pseudomonas sp. TJI-51] Length = 322 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 130/312 (41%), Positives = 197/312 (63%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ +A ++ Sbjct: 133 QILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAAALAEATDAQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 REALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYTMREGTAEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L++ + + E+ AL T A Y ++A L LP S ++ +L Sbjct: 253 ALVRQAIQKG--GLEDLEQIRVAVEESGALQYTAELARDYVKRAIACLEVLPASEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|332160062|ref|YP_004296639.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607378|emb|CBY28876.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp. palearctica Y11] gi|325664292|gb|ADZ40936.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862049|emb|CBX72215.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica W22703] Length = 323 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 131/315 (41%), Positives = 188/315 (59%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DLT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+G H+ Sbjct: 8 DLTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALGYQGTKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ + Sbjct: 68 TVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMMTSLE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + +++++ Sbjct: 128 SLRVLTLMSDATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSAAVLSD 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ A G Sbjct: 188 ATEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLHAMHNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + + I +G L+ + M++ +L T RA KA +L+ LP+S Sbjct: 248 TPEQAAMIRQAIEEGN-GRHLLEPVLVAMQQCGSLDYTRQRAEEEADKAIAALQVLPESD 306 Query: 306 WKKSLMEVVDFCLQR 320 + +L + +QR Sbjct: 307 HRLALEGLAHIAVQR 321 >gi|78484685|ref|YP_390610.1| trans-hexaprenyltranstransferase [Thiomicrospira crunogena XCL-2] gi|78362971|gb|ABB40936.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2] Length = 321 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 138/319 (43%), Positives = 198/319 (62%), Gaps = 7/319 (2%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K+++D D+E + LIL ++ SDV +I + Y+I SGGKRLRP+L L +A +Y+G Sbjct: 8 KLIQD----DIEATDQLILSKLSSDVVLINQIGHYIINSGGKRLRPLLVLLSAHACDYKG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H+ LA IEFIHT+TLLHDDVVD+S RRG A VWGN SVLVGDFL S++F M+ Sbjct: 64 KDHLTLAAVIEFIHTSTLLHDDVVDESETRRGNQTANEVWGNAASVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E +E +S +AEGE+ QL + D T + Y+ VI KTA LF AA + Sbjct: 124 VEPGIMRVMEVMSETTNVIAEGEVLQLLNCHDADTTSQRYMEVIHRKTAKLFEAATLLGP 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ G + + A SYG +LG AFQL+DD LDY + +E+GKN+G+D GKPTLP+I Sbjct: 184 IL-GKKPELESAFSSYGRHLGAAFQLIDDALDYTADADELGKNLGDDLAEGKPTLPLIYV 242 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT+ EK+ + I I + LK+ I++ + A+ T+ A +KAK +L L Sbjct: 243 LENGTENEKSLIRKAIETEGIKL--LKEVTSIIQTSGAIQYTQEVATQEAEKAKAALAPL 300 Query: 302 PDSSWKKSLMEVVDFCLQR 320 DS K++L+ + D +QR Sbjct: 301 NDSEIKQALLSLADLAVQR 319 >gi|229592556|ref|YP_002874675.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25] gi|229364422|emb|CAY52224.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25] Length = 322 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 129/312 (41%), Positives = 190/312 (60%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDGIIKKQLTSKVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRETANAMWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + G Sbjct: 133 KILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALCGATVEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 AEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G I E+L+ + + +L T A Y +A L LP S ++ +L Sbjct: 253 ALVRKAIQKGGI--EDLEAIRAAVEASGSLEYTAQLARDYVARAIKCLEALPASEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|56459585|ref|YP_154866.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] gi|56178595|gb|AAV81317.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] Length = 324 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 134/321 (41%), Positives = 191/321 (59%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + L DM VN LI +++ SDV +I + Y++ SGGKRLRP+L + L Y Sbjct: 4 MQSINALAKDDMLGVNALIGEQLQSDVALINQLGLYIVNSGGKRLRPLLAILACRALGYE 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H LA IEFIHTATLLHDDVVD+S LRRG+ A V+GN+ SVLVGDFL ++AF + Sbjct: 64 GNDHRKLATIIEFIHTATLLHDDVVDESELRRGRKTANAVFGNEASVLVGDFLYTRAFQL 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S L L+ ++EGE+ QL + D +E Y +VI KTA LF AA E++ Sbjct: 124 MVDLDSLRILRILADATNIISEGEVLQLMNCNDPDTSEASYFNVIYGKTAKLFEAATELA 183 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ V Q L YG LG AFQLVDD++DY + MGKN G+D GKPTLP++ Sbjct: 184 GVLTAQDEKVTQQLADYGRYLGTAFQLVDDLMDYTADSESMGKNAGDDLAEGKPTLPLLY 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + E+ + I G E+L+ M AL T +A ++A++SL Sbjct: 244 AMWHGNEIEQKLIREAIEQGD-GREHLQTVLTAMERTGALQYTRDKALEAAEQARESLSE 302 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LPDS +K++L+ + + R+ Sbjct: 303 LPDSDYKQALLTLTHLAVDRV 323 >gi|312962998|ref|ZP_07777484.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6] gi|311282767|gb|EFQ61362.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6] Length = 322 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 128/312 (41%), Positives = 190/312 (60%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I +++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDGIIKQQLTSKVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRETANAMWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + G Sbjct: 133 KILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALCGASAEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 AEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G I E+L+ + + +L T A Y +A L LP S ++ +L Sbjct: 253 ALVRKAIQKGGI--EDLESIRAAVEASGSLDYTAQLARDYVARAIKCLEALPASEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|330504899|ref|YP_004381768.1| polyprenyl synthetase [Pseudomonas mendocina NK-01] gi|328919185|gb|AEB60016.1| polyprenyl synthetase [Pseudomonas mendocina NK-01] Length = 322 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 132/312 (42%), Positives = 195/312 (62%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L + L Y+ D+ LLA Sbjct: 13 DFTAVDAIIRQQVVSRVPLVEKIGDYIISAGGKRLRPLLVLLSGRALGYQADDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSDMRRGRSTANAQWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ +AG + Sbjct: 133 KILSHATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHAAAALAGANEAQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+AL+++G +LGIAFQLVDD+LDY+G+ E+GKN+G+D GKPTLP+I + GT+ + Sbjct: 193 REALRTFGDHLGIAFQLVDDLLDYKGDAAELGKNVGDDLAEGKPTLPLIYTMREGTEEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G I E+L+ + AL T A Y ++A L LP ++ +L Sbjct: 253 ALVRRAIQKGGI--EDLESIRAAVDAAGALDYTAQLARDYAERAIACLDVLPAGEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ F + R + Sbjct: 311 IELSRFAVARTH 322 >gi|66043965|ref|YP_233806.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae B728a] gi|289674837|ref|ZP_06495727.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae FF5] gi|63254672|gb|AAY35768.1| Trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae B728a] gi|330941237|gb|EGH44102.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. pisi str. 1704B] gi|330954228|gb|EGH54488.1| trans-hexaprenyltranstransferase [Pseudomonas syringae Cit 7] gi|330977523|gb|EGH77469.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 322 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 128/312 (41%), Positives = 189/312 (60%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDVRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S E + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMEVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + Sbjct: 133 KILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPQEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + G+ + Sbjct: 193 SEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L+ + AL T A Y +A L LP S ++ +L Sbjct: 253 ALVRQAIQKG--GLEDLESIRNAVESAGALDYTAQLARDYAARAIACLDALPPSEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|197333941|ref|YP_002155036.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11] gi|197315431|gb|ACH64878.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11] Length = 323 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 131/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM VN IL ++ SDV +I + Y++ GGKRLRP+L + +A L Y G Sbjct: 4 KAIQALTADDMAIVNETILAQLNSDVALINQLGFYIVSGGGKRLRPVLAILSAKALGYEG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 KDHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAEFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S + L +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TSLGSIKILSLMSEAVNVIAEGEVLQLMNCNDPNTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPQEIETALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G K + + I +G ++ L M E +L T+ +A KA L L Sbjct: 244 MMHGNKEQNAMIREAIENGN-GLDKLDPILACMEEVGSLEYTKQKADEEADKAIAELATL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L + ++R Sbjct: 303 PESDYKEALKALAHLAVKR 321 >gi|254363100|ref|ZP_04979154.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213] gi|153094987|gb|EDN75550.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213] Length = 315 Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 129/314 (41%), Positives = 192/314 (61%), Gaps = 5/314 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN IL ++ S+V +I + Y+I GGKR+RP++ + A L YRG H+ A Sbjct: 1 DMQAVNAEILAQLNSEVLLINQLGHYIIAGGGKRIRPLIAVLAARALGYRGKKHITAAAF 60 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M+ + S L Sbjct: 61 IEFVHTATLLHDDVVDESDMRRGRPTANAHFGNAASVLVGDFIYTRSFQMMTDLDSLRVL 120 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + ++ A + Sbjct: 121 KVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCVAIAADASEEI 180 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ALK+YG LG AFQL+DD+LDY + +GKN+G+DF GKPTLP++ A K K Sbjct: 181 ETALKNYGCYLGTAFQLIDDILDYSAQSESLGKNVGDDFVEGKPTLPLLHAMHAADKAGK 240 Query: 251 N----FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ I +G +E + + IM+E+++L +A QKA DSL LP+S + Sbjct: 241 TTQAELIRNAIENGG-ELEQIPQVLAIMQEHQSLDYAMQKAREEAQKAVDSLGVLPESEY 299 Query: 307 KKSLMEVVDFCLQR 320 K++L+ + + R Sbjct: 300 KQALVSLAYLSVDR 313 >gi|59710884|ref|YP_203660.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114] gi|59478985|gb|AAW84772.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114] Length = 323 Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 130/319 (40%), Positives = 192/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM VN IL ++ SDV +I + Y++ GGKRLRP+L + +A L Y G Sbjct: 4 KAIQALTADDMAIVNETILAQLNSDVALINQLGFYIVSGGGKRLRPVLAILSAKALGYEG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 KDHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAEFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S + L +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TSLGSIKILSLMSEAVNVIAEGEVLQLMNCNDPNTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPQEIETALQNYGKYLGTAFQLIDDVMDYTSDGKDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G + + + I +G ++ L+ M+E +L T+ +A KA L L Sbjct: 244 MMHGNEEQNAMIREAIENGN-GLDKLEPILACMKEVGSLEYTKQKADEEADKAIAELAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L + ++R Sbjct: 303 PESDYKEALKALAHLAVKR 321 >gi|297183903|gb|ADI20025.1| geranylgeranyl pyrophosphate synthase [uncultured gamma proteobacterium EB000_65A11] Length = 321 Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 129/311 (41%), Positives = 189/311 (60%), Gaps = 4/311 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ LI + + V ++ ++ YLI +GGKRLRP+L L A Y+ H+ LA Sbjct: 12 DFSAVDVLIKSSLVTRVPLVEEISTYLIEAGGKRLRPLLVLLAARACNYQQHQHINLATI 71 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTA LLHDDVVD+S LRRG+ WGN SVLVGDFL S+AF M++E + Sbjct: 72 IEFLHTAMLLHDDVVDESDLRRGRKTVNAAWGNPASVLVGDFLHSRAFEMMVEIGDLRVM 131 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS T+AEGE++QL +N D TE+ Y+ VI KTA+LF AA +++AG Sbjct: 132 EILSHATNTIAEGEVQQLGNIRNPDATEQSYIEVINRKTAMLFEAASHSGAVLAGASPEQ 191 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +L+ YG +LG+AFQL+DD+LDY G ++GKN+G+DF GK TLP+I+A + G+ + Sbjct: 192 ELSLQQYGCHLGVAFQLIDDILDYEGSTEQLGKNVGDDFAEGKVTLPLIVAMRNGSPEQA 251 Query: 251 NFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + I G+++ ++NL K ++ L TE A + KA L LP S +K + Sbjct: 252 STVRQAILTGEVADIDNLLKT---VKATGGLQYTEALAVAEIDKATACLEKLPSSVYKDA 308 Query: 310 LMEVVDFCLQR 320 + ++ + + R Sbjct: 309 MHDLARYSINR 319 >gi|313200295|ref|YP_004038953.1| trans-hexaprenyltranstransferase [Methylovorus sp. MP688] gi|312439611|gb|ADQ83717.1| Trans-hexaprenyltranstransferase [Methylovorus sp. MP688] Length = 309 Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 129/309 (41%), Positives = 187/309 (60%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+ V+ +I K + SDV +I V +Y+I GGKRLRP L L +A H LA + Sbjct: 1 MQAVDAVIRKSLHSDVVLINQVAEYIINGGGKRLRPALVLLSAGAFGEVNARHHELAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+SA+RRG+ A ++GN SVLVGDF+ S+AF M++ +S +E Sbjct: 61 EFIHTATLLHDDVVDESAMRRGRATANTLFGNAASVLVGDFIYSRAFQMMVGVESMRVME 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ +AEGE+ QL + D+T+E YL VI KTA LF AA + ++I Sbjct: 121 VLAEATNIIAEGEVLQLLNVHDADITDEAYLKVIHYKTAKLFEAATRLGAIICSASEQDE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 QA+ YGM LG AFQL+DDVLD+ G+ E+GKN+G+D GKPTLP+++A + GT + Sbjct: 181 QAMAEYGMRLGTAFQLIDDVLDFSGDSQEIGKNLGDDLAEGKPTLPLLIAMRLGTTAQAQ 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I +G ++ L + E AL A + D+++ LPDS +++L+ Sbjct: 241 TIRKAIEEG--GLDELPAVMQAVHETGALDQVRAIARQEAKAGCDAIQHLPDSPSRQALL 298 Query: 312 EVVDFCLQR 320 ++ +F + R Sbjct: 299 KLAEFAVDR 307 >gi|300690362|ref|YP_003751357.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07] gi|299077422|emb|CBJ50048.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07] Length = 322 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 132/311 (42%), Positives = 193/311 (62%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG +H LA Sbjct: 12 EDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGKHHHELAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 72 VVEFIHTATLLHDDVVDESELRRGRRTANAVFGNAASVLVGDFLYSRAFQMMVQADSMRV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G + Sbjct: 132 MQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAA 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ + Sbjct: 192 TEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIHLLSHGTEEQ 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + I G E+ F ++ + AL T A A +++ LP S + ++ Sbjct: 252 RALARQAIEQG--GTEHFDAIFAAIQASGALEYTRKTAEREASAAAEAINALPPSLFLQT 309 Query: 310 LMEVVDFCLQR 320 L+++ F LQR Sbjct: 310 LIDLCAFSLQR 320 >gi|302188811|ref|ZP_07265484.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. syringae 642] Length = 322 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 127/312 (40%), Positives = 190/312 (60%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDVRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMDVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + + Sbjct: 133 KILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNASEAQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + G+ + Sbjct: 193 SEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G + E+L+ + AL T A Y +A L LP S ++ +L Sbjct: 253 ALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDALPPSEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|224823689|ref|ZP_03696798.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] gi|224604144|gb|EEG10318.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] Length = 360 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 135/319 (42%), Positives = 194/319 (60%), Gaps = 2/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + L DM+ V+ +I R+ SDV +I V +Y+I +GGKRLRP+LTL L+YRG Sbjct: 42 PLFRSLLADDMQTVDRVIRARLHSDVVLIRQVAEYIISAGGKRLRPVLTLLAGKALDYRG 101 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 ++ LA IEFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL ++AF M+ Sbjct: 102 EHLHELAAMIEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDFLYTRAFQMM 161 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + T++ LE ++ +AEGE+ QL N DVTE YL VI+ KTA LF AA V + Sbjct: 162 VTTRNMAILEVMAEATNIIAEGEVLQLLNIGNTDVTEAQYLQVIQYKTAKLFEAASRVGA 221 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 LIA +AL YGM+LG AFQ++DDVLDY G+ +GK++G+D GKPTLP+I Sbjct: 222 LIAAASPEQEKALADYGMHLGTAFQIIDDVLDYSGDAETIGKSLGDDLAEGKPTLPLIHT 281 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + I + + + + ++ AL + A ++A ++ L Sbjct: 282 MRHGSPEAATTVRDAIENAR--GDRFHEVLAAVQSCGALDYAKSEAVRAAEQAVAAIAGL 339 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS K++L+E+ ++R Sbjct: 340 PDSPSKQALVELARLSVER 358 >gi|39996419|ref|NP_952370.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA] gi|39983299|gb|AAR34693.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA] gi|298505429|gb|ADI84152.1| octaprenyl diphosphate synthase [Geobacter sulfurreducens KN400] Length = 322 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 128/310 (41%), Positives = 188/310 (60%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D++ V K + SDV +I V +Y++ SGGKR+RPML L +A + Y+GD HV LA Sbjct: 11 DLKNVELQFRKDLESDVYLIRKVGEYVLASGGKRIRPMLLLLSAKLCGYQGDRHVPLASV 70 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTATLLHDDVVD++ LRRG +A VWGN+ SVLVGDFL S++F +++E L Sbjct: 71 IEFIHTATLLHDDVVDNATLRRGNASANEVWGNEASVLVGDFLFSKSFSLMVEAGDLRIL 130 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + +S +AEGE+ QL + +L++T+E Y+ V+KSKTAVL SAA E +++ Sbjct: 131 KVISGATTIIAEGEVLQLLCTSDLEMTQERYIEVVKSKTAVLLSAACEAGAILGTSSAEQ 190 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++AL+ +GM+LGIAFQL+DD LDY + GK IG D GK TLP+I + + E+ Sbjct: 191 QEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIHTLMKCSDEER 250 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + + + + F ++ + + T A Y + K L DS K +L Sbjct: 251 ETIAAVVEKEILEPGDFESVFTLVHKYGGIEYTVSVANEYIARCKAHLGAFVDSQEKAAL 310 Query: 311 MEVVDFCLQR 320 +E+ D+ + R Sbjct: 311 IELADYVVNR 320 >gi|37528362|ref|NP_931707.1| octaprenyl diphosphate synthase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787800|emb|CAE16915.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 323 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 128/316 (40%), Positives = 191/316 (60%), Gaps = 1/316 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT DM VN IL ++ SDV +I + Y+I GGKR+RP++ + + +L Y+GD H+ Sbjct: 9 LTADDMAAVNETILSQLNSDVTLINQLGYYIISGGGKRIRPIIAILASRVLGYQGDKHIT 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A IEFIHTATLLHDDVVD+S +RRGK A ++GN SVLVGDF+ +++F M+ S Sbjct: 69 VAALIEFIHTATLLHDDVVDESDMRRGKATANAMFGNAASVLVGDFIYTRSFQMMTALNS 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ +S +AEGE+ QL + +++E+DY+ VI SKTA LF A S++++ Sbjct: 129 MRVLKLMSEATNVIAEGEVLQLMNCNDPNISEDDYMRVIYSKTARLFEVAAHSSAILSNA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 AL++YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++ A GT Sbjct: 189 TPEQEMALQNYGRYLGTAFQLIDDLLDYNADSDTLGKNTGDDLNEGKPTLPLLHAMNHGT 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + I G L+ M++ +L T RA KA +L+ L +S + Sbjct: 249 PEQSALIREAIEKGN-GRHLLETVLTTMKQCGSLEYTRKRAEEEADKAIAALQALENSPY 307 Query: 307 KKSLMEVVDFCLQRLN 322 K++L+ + +QRL+ Sbjct: 308 KQALVGLAHIAVQRLS 323 >gi|119472626|ref|ZP_01614617.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7] gi|119444830|gb|EAW26131.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7] Length = 323 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 131/320 (40%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM VN LI ++ S+V ++ + Y++ SGGKR+RPML + A L Y Sbjct: 3 IKAIQALIESDMNDVNQLIHAQMRSEVALVNQLGLYIVNSGGKRVRPMLAILAAKALGYT 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H+ LA +EFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ +++F + Sbjct: 63 GKDHITLATIVEFIHTATLLHDDVVDESNLRRGTPTANAEFGNAASVLVGDFIYTRSFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + ++ L+ +AEGE+ QL + D TE Y+ VI SKTA LF AA ++ Sbjct: 123 MVGLGKMQIMQILADATNIIAEGEVLQLMNCNDPDTTEASYMQVIYSKTAKLFEAATGLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I + AL YGM+LG AFQLVDDVLDY + N++GKNIG+D GKPTLP+I Sbjct: 183 AIITNNDEATLNALNLYGMHLGTAFQLVDDVLDYNADANQLGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G + + I +E+L++ +++ AL T +A KA L Sbjct: 243 AMQHGNAHQTQLIRDAIEHSN-GMEHLEEILSTLKQTNALEFTMQKAELEADKAIACLDF 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K +L+ + + R Sbjct: 302 LPESEYKHALVSLARIAVDR 321 >gi|120599984|ref|YP_964558.1| trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1] gi|146292082|ref|YP_001182506.1| trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32] gi|120560077|gb|ABM26004.1| Trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1] gi|145563772|gb|ABP74707.1| Trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32] Length = 331 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 137/310 (44%), Positives = 188/310 (60%), Gaps = 1/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y GD H+ LA Sbjct: 21 DMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARTVSYEGDAHLKLAAI 80 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M+ E + L Sbjct: 81 IEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELDNMRVL 140 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA +++++AG Sbjct: 141 RVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASTEQ 200 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL +YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I A GT E+ Sbjct: 201 ETALGNYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIYAIAHGTNEER 260 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G + + K + AL T+ +A +KA +L LPDS +K++L Sbjct: 261 QLIRQAIEQGD-GTQAIDKIVAALHHCGALTYTQQKAIEESEKAIAALDVLPDSEFKEAL 319 Query: 311 MEVVDFCLQR 320 + + + R Sbjct: 320 VSLAKISVDR 329 >gi|255066032|ref|ZP_05317887.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256] gi|255049577|gb|EET45041.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256] Length = 324 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 132/326 (40%), Positives = 202/326 (61%), Gaps = 8/326 (2%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ +VN +I + + SDV +I + Y+I +GGKRLRP++T+ A Sbjct: 1 MLENLPYFQRHLPEDLSRVNEVINQAVQSDVALISQIGTYIISAGGKRLRPIMTILAAKS 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y GD LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDGDKLYALAAMVEFIHTSTLLHDDVVDESDLRRGRETANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++++ S LE ++ +AEGE+ QL N D+TE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVDSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEAQYVQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTL Sbjct: 181 AQVGAILGNAAPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 P+I + G+K+ + + + + S + +K + + AL + A ++A Sbjct: 241 PLIYLMRNGSKQVADDVRHALENADRS--SFQKIHDYVVHSDALTYSISEARKAVEQAVA 298 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 SL LPDS K++++++ + L R++ Sbjct: 299 SLAVLPDSEVKQAMIQLAEESLARVS 324 >gi|319775186|ref|YP_004137674.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047] gi|317449777|emb|CBY85984.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047] Length = 329 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 128/317 (40%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA DS+ LP+ Sbjct: 252 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDSIAILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +KK+L+ + + R Sbjct: 311 SDYKKALISLAYLSVDR 327 >gi|71735497|ref|YP_273004.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556050|gb|AAZ35261.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 322 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 128/312 (41%), Positives = 188/312 (60%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S E + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMEVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + Sbjct: 133 RILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + G+ + Sbjct: 193 SEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L+ + AL T A Y +A L LP S ++ +L Sbjct: 253 ALVRQAIQKG--GLEDLESIRDAVESAGALDYTAQLARDYAARAIACLDALPPSEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|296313619|ref|ZP_06863560.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC 43768] gi|296839857|gb|EFH23795.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC 43768] Length = 324 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 136/332 (40%), Positives = 204/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDGKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++++ S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVDSDSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN +++ N +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRSYFEKIHNY-VVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L LPDS K +++++ L R++ Sbjct: 293 VDCAVAALDALPDSEVKDAMIQLAKESLVRVS 324 >gi|187931635|ref|YP_001891619.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712544|gb|ACD30841.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] Length = 325 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 135/326 (41%), Positives = 200/326 (61%), Gaps = 8/326 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIA-GVQNSVRQA--LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ Q+ + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKD 296 I A T++++ K I G+ ++ + I M ++ VD Y+ A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEYRIDEI----IAMVKDSGAVDYSYKVACQYADLAKQ 299 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + + R N Sbjct: 300 QIDFLPDSEYKQAMILLCGLAVNRKN 325 >gi|264676899|ref|YP_003276805.1| polyprenyl synthetase [Comamonas testosteroni CNB-2] gi|299529717|ref|ZP_07043154.1| Polyprenyl synthetase [Comamonas testosteroni S44] gi|262207411|gb|ACY31509.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2] gi|298722580|gb|EFI63500.1| Polyprenyl synthetase [Comamonas testosteroni S44] Length = 309 Score = 244 bits (624), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 131/295 (44%), Positives = 188/295 (63%), Gaps = 2/295 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M +V+ +I +R+ + V +I + +Y+I +GGKRLRP L L A L ++G N +LA + Sbjct: 1 MREVDIVIAQRLTTSVPLIAQISQYIIAAGGKRLRPALLLLIAGALGHQGKNKYILAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E S L+ Sbjct: 61 ELIHTATLLHDDVVDESTLRRGRATANETFGNPASVLVGDFLHTRSFQMMVEVGSMRVLQ 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS +AEGE++QL + + + E YLHVI+SKTA LF A+ ++++++AG V Sbjct: 121 ILSDATNVIAEGEVQQLINTHDASLNEAGYLHVIRSKTAQLFEASAQLAAVLAGATPEVE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 QA +YG LG AFQ++DDVLDY G EMGKN+G+D R GK TLP+I A QRG+ + Sbjct: 181 QACAAYGQALGTAFQIIDDVLDYTGNTQEMGKNLGDDLREGKCTLPLIAAMQRGSAEQAA 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ I G S + L I+R AL A++ Q+A D+L LP +++ Sbjct: 241 IVRNAIEQG--STDQLDAVVEIVRSTGALDVARAAAHAEAQRAIDALASLPSNAY 293 >gi|320326220|gb|EFW82274.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea str. B076] gi|320330645|gb|EFW86622.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330881372|gb|EGH15521.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330891602|gb|EGH24263.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. mori str. 301020] Length = 322 Score = 244 bits (624), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 128/312 (41%), Positives = 188/312 (60%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S E + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMEVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + Sbjct: 133 RILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + G+ + Sbjct: 193 SEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L+ + AL T A Y +A L LP S ++ +L Sbjct: 253 ALVRQAIQKG--GLEDLESIRNAVESAGALDYTAQLARDYAARAIACLDALPPSEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|253991517|ref|YP_003042873.1| octaprenyl diphosphate synthase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638395|emb|CAR67017.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase (opp synthetase) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782967|emb|CAQ86132.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase (opp synthetase) [Photorhabdus asymbiotica] Length = 323 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 130/316 (41%), Positives = 186/316 (58%), Gaps = 1/316 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT DM VN IL ++ SDV +I + Y+I GGKR+RP++ + A L Y+ D H+ Sbjct: 9 LTADDMAAVNEAILSQLNSDVALINQLGYYIISGGGKRIRPIIAILAARALGYQSDKHIT 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ S Sbjct: 69 VAALIEFIHTATLLHDDVVDESDMRRGKATANATFGNAASVLVGDFIYTRSFQMMTTLNS 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ +S +AEGE+ QL + +++E+DY+ VI SKTA LF A S++I+ Sbjct: 129 MRVLKLMSEATNVIAEGEVLQLMNCNDPNISEDDYMRVIYSKTARLFEVAAHSSAIISNA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 AL+ YG LG AFQL+DD+LDY + N +GKN G+D GKPTLP++ A G Sbjct: 189 TPEQETALQDYGRYLGTAFQLIDDLLDYDADSNTLGKNTGDDLNEGKPTLPLLHAMNHGN 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + I G L+ I M++ +L T RA KA +L+ L S + Sbjct: 249 PEQSQLIRKAIEKGN-GRHLLETVLITMKQCGSLEYTRKRAEEEADKAIAALQVLESSPY 307 Query: 307 KKSLMEVVDFCLQRLN 322 K++L+ + +QRL+ Sbjct: 308 KQALVGLAHIAVQRLS 323 >gi|289625167|ref|ZP_06458121.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651351|ref|ZP_06482694.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi str. 2250] gi|298485383|ref|ZP_07003473.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160081|gb|EFI01112.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330869163|gb|EGH03872.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330988777|gb|EGH86880.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 322 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 128/312 (41%), Positives = 188/312 (60%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S E + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMEVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + Sbjct: 133 RILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + G+ + Sbjct: 193 SEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L+ + AL T A Y +A L LP S ++ +L Sbjct: 253 ALVRQAIQKG--GLEDLESIRNAVESAGALDYTAQLARDYAARAIACLDTLPPSEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|301169600|emb|CBW29201.1| octaprenyl diphosphate synthase [Haemophilus influenzae 10810] Length = 329 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 127/317 (40%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 252 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +KK+L+ + + R Sbjct: 311 SEYKKALISLAYLSVDR 327 >gi|261365500|ref|ZP_05978383.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996] gi|288566037|gb|EFC87597.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996] Length = 324 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 132/326 (40%), Positives = 201/326 (61%), Gaps = 8/326 (2%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ +VN +I K + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLSRVNEVINKAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKS 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y GD LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDGDKLYALAAMVEFIHTSTLLHDDVVDESDLRRGRETANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++++ S LE ++ +AEGE+ QL N D+TE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVDSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEAQYVQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTL Sbjct: 181 AQVGAILGNAPPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 P+I + G+K+ + + + + S + +K + + AL + A ++A Sbjct: 241 PLIYLMRNGSKQVADDVRHALENADRS--SFQKIHDYVVRSDALTYSISEARKAVEQAVA 298 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 SL LPDS K++++++ + L R++ Sbjct: 299 SLAVLPDSEVKQAMIQLAEESLARVS 324 >gi|5712726|gb|AAD47627.1| octylprenyl diphosphate synthase-like protein [Pseudomonas sp. BG33R] Length = 322 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 126/312 (40%), Positives = 189/312 (60%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I +++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDGIIKQQLTSKVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDF+ S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRETANAMWGNAPSVLVGDFMYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+ F A+ ++ + G Sbjct: 133 KILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMFFEASTHSAAALCGATAEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G NLG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 AEALRTFGDNLGVAFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G I E+L+ + + +L T A Y +A L LP S ++ +L Sbjct: 253 ALVRKAIQKGGI--EDLEAIRAAVEASGSLEYTAQLARDYVARAIQCLEALPASEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|332286668|ref|YP_004418579.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7] gi|330430621|gb|AEC21955.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7] Length = 308 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 132/309 (42%), Positives = 193/309 (62%), Gaps = 3/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+ V+ +I R+ SDV +I + Y++ +GGKR+RP + L A L Y+G NH LLA + Sbjct: 1 MKAVDAVIRARLNSDVVLIRTIGDYIVGAGGKRMRPAMLLMMANALGYQGGNHHLLAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M++++ S A+ Sbjct: 61 EFIHTATLLHDDVVDESDLRRGRSTANAVFGNAASVLVGDYLYSRSFEMMVQSGSMPAMS 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS +AEGE+ QL + DV+ + YL V++ KTA LF AA +V ++I G Sbjct: 121 VLSAATTVIAEGEVLQLLNVHDPDVSLDRYLQVVRYKTAKLFEAATQVGAIIGGATTEQE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 A +YG ++G AFQL+DDVLDY G +GKN+G+D R GKPT+P+I + GT ++K Sbjct: 181 AAAAAYGRHIGTAFQLIDDVLDYSGGAEALGKNVGDDLREGKPTMPLIRVMEVGTGQQKQ 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G + +A +++ +AL T A + A+++L LP S +KSL+ Sbjct: 241 LIQDAIRTGDADFAAVARA---IQDTQALDYTRQAAIAEAALAREALAVLPVSVHQKSLL 297 Query: 312 EVVDFCLQR 320 E F ++R Sbjct: 298 EFCSFAVER 306 >gi|261401641|ref|ZP_05987766.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970] gi|313667728|ref|YP_004048012.1| octaprenyl-diphosphate synthase [Neisseria lactamica ST-640] gi|269208281|gb|EEZ74736.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970] gi|313005190|emb|CBN86623.1| octaprenyl-diphosphate synthase [Neisseria lactamica 020-06] Length = 324 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 137/332 (41%), Positives = 205/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I SGGKRLRP++T+ Sbjct: 1 MLENLPYFQQHLSEDLAKVNKVINRAVQSDVALIAQIGTYIIGSGGKRLRPIMTILAGRS 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y D LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDDKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN +++ + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRSY-FEKIHDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L LPDS K++++ + L R++ Sbjct: 293 VDCAVAALDALPDSEAKEAMIRLARESLVRVS 324 >gi|24375152|ref|NP_719195.1| octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1] gi|24349926|gb|AAN56639.1|AE015800_12 octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1] Length = 323 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 138/310 (44%), Positives = 189/310 (60%), Gaps = 1/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+G+ H+ LA Sbjct: 13 DMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVDYQGEAHLKLAAI 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M+ E S L Sbjct: 73 IEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELDSMRVL 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA +++++AG Sbjct: 133 RVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASPEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL YG LG AFQL DD+LDY + +E+GKNIG+D GKPTLP+I A GT+ EK Sbjct: 193 ETALGDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIYAIAHGTEEEK 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G ++K + AL T+ +A KA +L LPDS +K +L Sbjct: 253 QLIRQAIEQGD-GTHAIEKIVAALHHCGALNYTQQKAIEESNKAIAALSVLPDSDFKTAL 311 Query: 311 MEVVDFCLQR 320 + + + R Sbjct: 312 ISLAKISVDR 321 >gi|254805638|ref|YP_003083859.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14] gi|254669180|emb|CBA07918.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14] gi|325145122|gb|EGC67404.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240013] gi|325205404|gb|ADZ00857.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M04-240196] Length = 324 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 135/332 (40%), Positives = 205/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDEKLYALAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN +++ + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRSY-FEKIHDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L LPDS K +++++ L R++ Sbjct: 293 VDCAVTALDALPDSEVKDAMIQLAKESLVRVS 324 >gi|319425378|gb|ADV53452.1| Polyprenyl synthetase [Shewanella putrefaciens 200] Length = 331 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 137/310 (44%), Positives = 189/310 (60%), Gaps = 1/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y GD H+ LA Sbjct: 21 DMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARTVSYEGDAHLKLAAI 80 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M+ E + L Sbjct: 81 IEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELDNMRVL 140 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA +++++AG Sbjct: 141 RVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEH 200 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL +YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I A GT+ E+ Sbjct: 201 ETALGNYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIYAIAHGTEEER 260 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G + + K + AL T+ +A +KA +L LPDS +K++L Sbjct: 261 QLIRQAIEQGD-GTQAIDKIVAALHHCGALAYTQQKAIEESEKAIAALDVLPDSDFKEAL 319 Query: 311 MEVVDFCLQR 320 + + + R Sbjct: 320 VALAKISVDR 329 >gi|134095950|ref|YP_001101025.1| octaprenyl diphosphate synthase [Herminiimonas arsenicoxydans] gi|133739853|emb|CAL62904.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Herminiimonas arsenicoxydans] Length = 329 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 130/310 (41%), Positives = 192/310 (61%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM V+ +I +++ S+V ++ + Y+I +GGKR+RP+L L A L YRG + LA Sbjct: 20 DMSAVDAVIRQKLHSEVALVNQIADYIISAGGKRIRPVLVLLMANALGYRGTHQYDLAAV 79 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M++ + A+ Sbjct: 80 VEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDFLHSRAFQMMVTVGNIRAM 139 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ +AEGE+ QL + D++EE Y VI+SKTA LF AA ++ +LIAG Sbjct: 140 QILADATNVIAEGEVLQLLNMHDPDISEERYTQVIRSKTAKLFEAAAQLGALIAGASEDE 199 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A YG +LG AFQL+DDVLDY G ++GKN+G+D R GK TLP+I + G ++ Sbjct: 200 IEAAAEYGRSLGTAFQLIDDVLDYSGHAEDIGKNVGDDLREGKATLPLIYLMEHGNTEQR 259 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 +S I +G E+ + + + AL T+ +A +A S+ LP+S +K +L Sbjct: 260 ELVRSCIENGD--EEHFDAVLLAVTTSGALDYTKRKAEEAAARAAASIAGLPESQFKDAL 317 Query: 311 MEVVDFCLQR 320 + + F + R Sbjct: 318 LNLSSFAVHR 327 >gi|241668473|ref|ZP_04756051.1| polyprenyl synthetase family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877007|ref|ZP_05249717.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843028|gb|EET21442.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 325 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 132/324 (40%), Positives = 205/324 (63%), Gaps = 8/324 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K +++L +D+E N I+ + S+V +I + Y+I SGGKRLRP+L + + L Y Sbjct: 4 LKDIQNLIKQDIENNNQFIINSLSSEVVLINQISHYIINSGGKRLRPLLVMLFSRALNYT 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GNDHLACAAIIEFIHTATLLHDDVVDDSHLRRGKETANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N++++EEDY +VI KTA LF AA E++ Sbjct: 124 MVGLDNMKIMQILADATNKISEGEVLQLLNARNIELSEEDYTNVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQNS---VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + S ++ ++K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQSYSKLQNSIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKD 296 I A + E+ K I G+ + + I + ++ V+ Y+ A Y KAK+ Sbjct: 244 TIYALANTSSAEQKKIKDAIEKGQYDISEI----INIVKSSGAVEYSYQVACQYADKAKE 299 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 S+ LP+S +K++++ + D ++R Sbjct: 300 SISFLPESEYKQAMILLCDLAVKR 323 >gi|237801840|ref|ZP_04590301.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024698|gb|EGI04754.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 319 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 127/308 (41%), Positives = 188/308 (61%), Gaps = 2/308 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDIRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S E + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMEVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + + Sbjct: 133 KILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + G+ + Sbjct: 193 TEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L+ + AL T A Y +A L LP S ++ +L Sbjct: 253 ALVRQAIQKG--GLEDLESIRNAVESAGALDYTAQLARDYAARAIACLDALPPSEYRDAL 310 Query: 311 MEVVDFCL 318 +E+ +F + Sbjct: 311 VELSEFAV 318 >gi|146281341|ref|YP_001171494.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501] gi|145569546|gb|ABP78652.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501] gi|327479520|gb|AEA82830.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri DSM 4166] Length = 322 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 124/312 (39%), Positives = 193/312 (61%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L + L ++G+ LLA Sbjct: 13 DFAAVDGIIRKQLTSRVPLVEKIGDYITSAGGKRLRPLLVLLSGSALGHQGEQLRLLAAI 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HT+TLLHDDVVD S +RRG+ A +WGN SVLVGDFL +++F M++E S + Sbjct: 73 IEFLHTSTLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYARSFEMMVELDSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ +AG Sbjct: 133 RIISQATRVIAEGEVLQLSKVRDASTTEEIYMEVIRGKTAMLFEASTHSAATLAGASEQQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+AL+++G +LGIAFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 REALRTFGDHLGIAFQLVDDLLDYQGDAETLGKNVGDDLAEGKPTLPLIYTMREGTAEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L+ + + AL T A Y ++A L +P + ++ +L Sbjct: 253 ALVRKAIQKG--GLEDLESIRSAVEASGALDYTAKLARDYAERAIACLEVIPANQYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +++ F + R + Sbjct: 311 VQLCRFAVARTH 322 >gi|319897631|ref|YP_004135828.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031] gi|317433137|emb|CBY81511.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031] Length = 329 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 126/317 (39%), Positives = 195/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL++YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEAQEKALQNYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 252 HGNPQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 311 SEYKQALISLAYLSVDR 327 >gi|146308698|ref|YP_001189163.1| polyprenyl synthetase [Pseudomonas mendocina ymp] gi|145576899|gb|ABP86431.1| Polyprenyl synthetase [Pseudomonas mendocina ymp] Length = 322 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 131/312 (41%), Positives = 195/312 (62%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L + L Y+ D+ LLA Sbjct: 13 DFTAVDGIIRQQVVSRVPLVEKIGDYIISAGGKRLRPLLVLLSGRALGYQADDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSDMRRGRSTANAQWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ +AG + Sbjct: 133 KILSHATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALAGANEAQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+AL+++G +LGIAFQLVDD+LDY+G+ E+GKN+G+D GKPTLP+I + G++ + Sbjct: 193 REALRTFGDHLGIAFQLVDDLLDYKGDAAELGKNVGDDLAEGKPTLPLIYTMREGSEEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G I E+L+ + AL T A Y ++A L LP ++ +L Sbjct: 253 ALVRRAIQKGGI--EDLESIRAAVDAAGALDYTARLARDYAERAIACLDVLPAGEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ F + R + Sbjct: 311 IELSRFAVARTH 322 >gi|160900919|ref|YP_001566501.1| polyprenyl synthetase [Delftia acidovorans SPH-1] gi|160366503|gb|ABX38116.1| Polyprenyl synthetase [Delftia acidovorans SPH-1] Length = 359 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 126/274 (45%), Positives = 172/274 (62%), Gaps = 2/274 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +V+ +I +R+ + V +I + +Y+I +GGKRLRP L L L Y G + + Sbjct: 46 LITDDMREVDHVIAQRLTTTVPLIAQISQYIIAAGGKRLRPALLLMVCNALGYEGRDRHV 105 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S++F M++E S Sbjct: 106 LAAVVELIHTATLLHDDVVDESTLRRGRPTANETFGNPASVLVGDFLHSRSFQMMVEVGS 165 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ LS +AEGE++QL + + + E YLHVI+SKTA LF A+ ++ +++A Sbjct: 166 MRVLKILSDATNVIAEGEVQQLINTHDASLDEAGYLHVIRSKTAQLFEASAQLGAVLADA 225 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QA YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I A QRGT Sbjct: 226 PREIEQACAIYGQALGTAFQIIDDVLDYTGDTQEMGKNLGDDLREGKCTLPLIAAMQRGT 285 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280 + ++ I G S E L I+R AL Sbjct: 286 PEQAAIVRNAIEQG--STEQLSAVVDIVRSTGAL 317 >gi|229845932|ref|ZP_04466044.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1] gi|229810936|gb|EEP46653.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1] Length = 323 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 126/317 (39%), Positives = 195/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 6 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 66 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 126 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSETNYMRVIYSKTARLFEVAGQAAAIV 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL++YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 186 AGGTEAQEKALQNYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 246 HGNAQQAALIREAIEQGG-KREAIDEVLTIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 305 SEYKQALISLAYLSVDR 321 >gi|330813965|ref|YP_004358204.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487060|gb|AEA81465.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 338 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 124/312 (39%), Positives = 192/312 (61%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++E+V+ I +++ S VE+I ++ YLI SGGKRLRP+LT+A++ + Y+GD H+ LA Sbjct: 27 EIEEVDSFIKEKLSSHVELIGEMSSYLIQSGGKRLRPLLTIASSELFGYQGDRHIKLAAC 86 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ATLLHDDV+D S RRGK +WGN+ S+L GD+LL + F +++E S E L Sbjct: 87 VELIHNATLLHDDVIDKSDFRRGKKTNNNLWGNKNSILTGDYLLGRCFEIMVEDGSLEVL 146 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS V+ +A+GE+ QL K ++ E+ YL +I SKT+ LF+A++ V I + Sbjct: 147 KLLSSVSSEIAQGEILQLQHEKEVETLEKTYLEIIGSKTSSLFAASMRVGGCINDKSKNE 206 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++AL S+G NLGI FQ+ DD+LDY + GK IG DF GK TLP+I+ +Q+ ++ E+ Sbjct: 207 KEALTSFGFNLGICFQITDDILDYYSDKIAFGKVIGNDFYEGKVTLPIIMLYQKSSESER 266 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 K + + E L +M + + + + RA + + DSL P+S K L Sbjct: 267 LALKEMFVRKERTKEELAYTLNLMTKYQVIASCKKRAEHFSSVSADSLGIFPESKEKTRL 326 Query: 311 MEVVDFCLQRLN 322 E+ + + R+N Sbjct: 327 QELAFYIVNRIN 338 >gi|325134983|gb|EGC57614.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M13399] gi|325202853|gb|ADY98307.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240149] gi|325208846|gb|ADZ04298.1| octaprenyl-diphosphate synthase [Neisseria meningitidis NZ-05/33] Length = 324 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 135/332 (40%), Positives = 205/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN +++ + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRSY-FEKIHDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L LPDS K +++++ L R++ Sbjct: 293 VDCAVTALDALPDSEVKDAMIQLAKESLVRVS 324 >gi|145632254|ref|ZP_01787989.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655] gi|144987161|gb|EDJ93691.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655] Length = 323 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 128/317 (40%), Positives = 193/317 (60%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 6 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 66 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 126 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSETNYMRVIYSKTARLFEVAGQAAAIV 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 186 AGGTEVQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA DS+ LP+ Sbjct: 246 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDSIAILPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +KK+L+ + + R Sbjct: 305 SDYKKALISLAYLSVDR 321 >gi|332531718|ref|ZP_08407603.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332038694|gb|EGI75136.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 323 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM VN LI ++ SDV ++ + Y++ SGGKR+RPML + A L Y+ Sbjct: 3 IKAIQALIESDMNDVNQLIHAQMRSDVALVNQLGLYIVSSGGKRVRPMLAILAAKALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H+ LA +EFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ +++F + Sbjct: 63 GKDHITLATIVEFIHTATLLHDDVVDESNLRRGTPTANAEFGNAASVLVGDFIYTRSFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + ++ L+ +AEGE+ QL + D TE Y+ VI SKTA LF AA ++ Sbjct: 123 MVGLGKMQIMQVLADATNIIAEGEVLQLMNCNDPDTTEASYMQVIYSKTAKLFEAATGLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I + AL YGM+LG AFQLVDDVLDY + ++GKNIG+D GKPTLP+I Sbjct: 183 AIITEQDQATLDALNLYGMHLGTAFQLVDDVLDYNADAEQLGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G++++ + I +E+L++ +++ AL T +A +KA L Sbjct: 243 AMQHGSEQQTLLIRDAIEHSN-GMEHLEEILTALKQTNALEFTMQKAELEAEKAIACLDF 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L +S +K++L+ + + R Sbjct: 302 LAESDYKQALISLARIAVDR 321 >gi|226946118|ref|YP_002801191.1| trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ] gi|226721045|gb|ACO80216.1| Trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ] Length = 322 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 129/312 (41%), Positives = 188/312 (60%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+I +GGKRLRP+L L L + LLA A Sbjct: 13 DFSAVDGIIRKQLTSRVPLVETIGDYIISAGGKRLRPLLVLLCGNALGKCDERMRLLAAA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HT+TLLHDDVVDDS LRRG+ + +WGN SVLVGDFL ++ F M++E S + Sbjct: 73 IEFLHTSTLLHDDVVDDSELRRGRSTSNALWGNAPSVLVGDFLYARCFEMLVELASMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF AA ++ +AG + Sbjct: 133 RIMSQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEAASHGAASLAGATSEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+ +G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 AEALRCFGDSLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPGQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G I E+L + AL T RA + ++A L LP ++ +L Sbjct: 253 ALVRRAIQKGGI--EDLTAIVAAVEAAGALDYTARRAREHAERAIACLDTLPPGEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ F + R + Sbjct: 311 VELSRFAVARTH 322 >gi|221068969|ref|ZP_03545074.1| Polyprenyl synthetase [Comamonas testosteroni KF-1] gi|220713992|gb|EED69360.1| Polyprenyl synthetase [Comamonas testosteroni KF-1] Length = 309 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 130/295 (44%), Positives = 188/295 (63%), Gaps = 2/295 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M +V+ +I +R+ + V +I + +Y+I +GGKRLRP L L A L ++G N +LA + Sbjct: 1 MREVDIVIAQRLTTSVPLIAQISQYIIAAGGKRLRPALLLLIAGALGHQGKNKYILAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E S L+ Sbjct: 61 ELIHTATLLHDDVVDESTLRRGRATANETFGNPASVLVGDFLHTRSFQMMVEVGSMRVLQ 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS +AEGE++QL + + + E YLHVI+SKTA LF A+ ++++++AG + Sbjct: 121 ILSDATNVIAEGEVQQLINTHDASLNEAGYLHVIRSKTAQLFEASAQLAAVLAGATPEME 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 QA +YG LG AFQ++DDVLDY G EMGKN+G+D R GK TLP+I A QRG+ + Sbjct: 181 QACATYGQALGTAFQIIDDVLDYTGNAQEMGKNLGDDLREGKCTLPLIAAMQRGSAEQAA 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ I G S + L I+R AL A++ Q+A D+L LP +++ Sbjct: 241 IVRNAIEQG--STDQLDAVVDIVRSTGALDIARAAAHAEAQRAIDALAALPGNAY 293 >gi|304413337|ref|ZP_07394810.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola LSR1] gi|304284180|gb|EFL92573.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola LSR1] Length = 327 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 134/322 (41%), Positives = 198/322 (61%), Gaps = 12/322 (3%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 +++LT KDM VN I +++ SDV +I ++ Y+I +GGKR+RPM+ + A L Y+G+ Sbjct: 11 VKELTAKDMATVNDTIEEQMRSDVALITEISHYIINNGGKRIRPMIAILVAQALGYKGNQ 70 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ +A IEFIHTATLLHDDVVD+S LRRGK +GN SVLVGDF+ ++AF M+ + Sbjct: 71 HITIAVLIEFIHTATLLHDDVVDNSDLRRGKATVNAQFGNAASVLVGDFIYTRAFQMMTQ 130 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S LE +S +A+GE++QL K+ +TEE+YL VI SKTA LF AA + S+++ Sbjct: 131 LGSMRVLEVMSTATNMIAKGEVQQLINCKDPRITEENYLSVIGSKTAKLFEAASQSSAIL 190 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG AL+ YG ++GIAFQL+DD+LDY E N GK G D GK TLP++ A + Sbjct: 191 AGANKEKELALQRYGHHIGIAFQLIDDLLDYSPE-NSTGKKSGADLAEGKVTLPLLHAIE 249 Query: 244 RGTKREKNFWKSTI--NDGK---ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 +GT + + I ++G+ SV+ + K + + R TE KA L Sbjct: 250 KGTPEQTALLCNAIQQDNGRHLFTSVQQVLKEYGSLNYTRQCAKTE------ANKAIAEL 303 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 + LP++ ++ +L ++ F + R Sbjct: 304 QVLPENPYRIALEKLAKFSIMR 325 >gi|257487512|ref|ZP_05641553.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 322 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 128/312 (41%), Positives = 187/312 (59%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S E + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMEVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + Sbjct: 133 RILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + G+ + Sbjct: 193 SEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L+ + AL T A Y +A L LP S ++ L Sbjct: 253 ALVRQAIQKG--GLEDLESIRNAVESAGALDYTAQLARDYAARAIACLDALPPSEYRDVL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|167627921|ref|YP_001678421.1| polyprenyl synthetase family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597922|gb|ABZ87920.1| polyprenyl synthetase family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 325 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 131/324 (40%), Positives = 205/324 (63%), Gaps = 8/324 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K +++L +D+E N I+ + S+V +I + Y+I SGGKRLRP+L + + L Y Sbjct: 4 LKDIQNLIKQDIENNNQFIINSLSSEVVLINQISHYIINSGGKRLRPLLVMLFSRALNYT 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GNDHLACAAIIEFIHTATLLHDDVVDDSHLRRGKETANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N++++EEDY +VI KTA LF AA E++ Sbjct: 124 MVGLDNMQIMQILADATNKISEGEVLQLLNARNIELSEEDYTNVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQNS---VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + S ++ ++K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQSYSKLQNSIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKD 296 I A + E+ K I G+ + + I + ++ V+ Y+ A Y K+K+ Sbjct: 244 TIYALANTSSAEQKKIKDAIEKGQYDISEI----INIVKSSGAVEYSYQVACQYADKSKE 299 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 S+ LP+S +K++++ + D ++R Sbjct: 300 SISFLPESEYKQAMILLCDLAVKR 323 >gi|34496302|ref|NP_900517.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC 12472] gi|34102155|gb|AAQ58522.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC 12472] Length = 309 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 130/309 (42%), Positives = 192/309 (62%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+ V+ +I R+ SDV +I V +Y+I +GGKRLRP+LTL + L YRG++ LA I Sbjct: 1 MQTVDGVIRARLHSDVVLIRQVAEYIISAGGKRLRPILTLLSGRALGYRGEHLFELAAMI 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL ++AF M++ T++ LE Sbjct: 61 EFIHTATLLHDDVVDESDLRRGRKTANALFGNAASVLVGDFLYTRAFQMMVTTRNMTILE 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 ++ +AEGE+ QL N DV+E++YL VI+ KTA LF AA V +LIA Sbjct: 121 VMAEATNIIAEGEVLQLLNIGNTDVSEDEYLKVIQYKTAKLFEAAARVGALIADASAEQV 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A+ YGM LG AFQ++DDVLDY G+ + +GK++G+D GKPTLP+I + G+ Sbjct: 181 RAMADYGMYLGTAFQIIDDVLDYSGDADTIGKSLGDDLAEGKPTLPLIYTMRNGSSEASA 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + + + + + ++ AL + A ++A SL+ +PDS +++L+ Sbjct: 241 LVRDALENA--NRDRFHDVLNAVQSCGALEYAKNEAVKMAEQAIASLQSIPDSEVRQALI 298 Query: 312 EVVDFCLQR 320 E+ + R Sbjct: 299 ELARLSVDR 307 >gi|121603663|ref|YP_980992.1| trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans CJ2] gi|120592632|gb|ABM36071.1| Trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans CJ2] Length = 327 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 134/309 (43%), Positives = 192/309 (62%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M ++ +I +R+ S+V ++ V +Y+I +GGKRLRP L L L+YRG LA + Sbjct: 19 MRAMDAVIARRLQSEVPLVAQVSQYIIAAGGKRLRPALVLLMCGALDYRGAQRFNLAAVV 78 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M++E ++ Sbjct: 79 EFIHTATLLHDDVVDESTLRRGRSTANEIFGNPASVLVGDFLYSRAFQMMVEVGDMRIMQ 138 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ +AEGE+ QL + +TE YL VI+SKTA LF A+ +++L+A +V Sbjct: 139 TLAEATNVIAEGEVLQLMNMHDAGLTEAGYLRVIRSKTAKLFEASARLAALLAQSSPAVE 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 Q YG LG AFQ++DDVLDY GEV EMGKN+G+D R GK TLP+I+A QRGT+ E+ Sbjct: 199 QHCAEYGQALGTAFQVIDDVLDYDGEVLEMGKNLGDDLREGKVTLPLIIAMQRGTQAERA 258 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G E + + I+++ AL T A + +A ++L+ LP + + +L Sbjct: 259 TIRQAIETG--GTEQMAQVINIVQKTGALRATRDAAATEALRALNALQNLPQNPYSHALE 316 Query: 312 EVVDFCLQR 320 ++ L R Sbjct: 317 QLASQLLAR 325 >gi|16272821|ref|NP_439042.1| octaprenyl-diphosphate synthase [Haemophilus influenzae Rd KW20] gi|260579972|ref|ZP_05847802.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae RdAW] gi|1170590|sp|P44916|ISPB_HAEIN RecName: Full=Octaprenyl-diphosphate synthase; AltName: Full=All-trans-octaprenyl-diphosphate synthase; AltName: Full=Octaprenyl pyrophosphate synthase; Short=OPP synthase gi|1573899|gb|AAC22540.1| octaprenyl-diphosphate synthase (ispB) [Haemophilus influenzae Rd KW20] gi|260093256|gb|EEW77189.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae RdAW] gi|309751451|gb|ADO81435.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2866] Length = 329 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 126/317 (39%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 252 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 311 SEYKQALISLAYLSVDR 327 >gi|209693963|ref|YP_002261891.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238] gi|208007914|emb|CAQ78045.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238] Length = 323 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 129/319 (40%), Positives = 189/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM VN IL ++ SDV +I + Y++ GGKRLRP+L + +A L Y G Sbjct: 4 KAIQALTADDMAIVNETILAQLNSDVALINQLGFYIVSGGGKRLRPVLAILSAKALGYEG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 KDHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAEFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S + L +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TSLGSIKILSLMSESVNVIAEGEVLQLMNCNDPNTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNNASQEIETALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G + + I G ++ L M+E +L T+ +A KA L + Sbjct: 244 MNNGNAEQAAMIRHAIEQGN-GLDKLDPILACMKEVGSLEYTKQKADEEADKAIAELSII 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L + ++R Sbjct: 303 PESEYKEALKALAHLAVKR 321 >gi|68249468|ref|YP_248580.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP] gi|329122893|ref|ZP_08251464.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116] gi|68057667|gb|AAX87920.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP] gi|327471824|gb|EGF17264.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116] Length = 329 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 126/317 (39%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 252 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 311 SEYKQALISLAYLSVDR 327 >gi|270265042|ref|ZP_06193305.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13] gi|270040976|gb|EFA14077.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13] Length = 310 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 129/309 (41%), Positives = 185/309 (59%), Gaps = 1/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+GD H+ +A I Sbjct: 1 MAAVNATILEQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALHYQGDKHITVAALI 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+ +S L Sbjct: 61 EFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLESLRVLA 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S++++ + Sbjct: 121 LMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQSSAILSEASEAEE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +AL+ YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++ A + G + Sbjct: 181 KALQDYGRYLGTAFQLIDDLLDYSADGSTLGKNTGDDLNEGKPTLPLLHAMRNGNSAQTA 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G L+ M++ +L T RA KA +L+ LP+S + +L Sbjct: 241 MIREAIEQGS-GRHLLEPVLQAMQQCGSLEYTRQRAEEEADKAIAALQVLPESPHRSALE 299 Query: 312 EVVDFCLQR 320 + +QR Sbjct: 300 GLAHLAVQR 308 >gi|145638300|ref|ZP_01793910.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittII] gi|145272629|gb|EDK12536.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittII] Length = 323 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 126/317 (39%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 6 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 66 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 126 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 186 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQALGKNVGDDLAEGKPTLPLLHAMR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 246 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 305 SEYKQALISLAYLSVDR 321 >gi|58040424|ref|YP_192388.1| decaprenyl diphosphate synthase [Gluconobacter oxydans 621H] gi|58002838|gb|AAW61732.1| Decaprenyl diphosphate synthase [Gluconobacter oxydans 621H] Length = 315 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 130/313 (41%), Positives = 194/313 (61%), Gaps = 4/313 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLL 67 M+ N I+ R+ S V +IP + +L+ +GGKRLRP+LTLA++ + Y+ HV L Sbjct: 1 MQACNRAIIARMESPVPLIPQLGAHLVAAGGKRLRPLLTLASSRLCGYKSTPENQRHVGL 60 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL +++F ++ S Sbjct: 61 AACVEFIHTATLLHDDVVDESNLRRGLASANAVFGNKASVLVGDFLFARSFQLMTADGSL 120 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + + LS + T+AEGE+ Q+ +L + YL VI KTA LF+AA V +++A Sbjct: 121 KVMAILSDASATIAEGEVLQMVTQNDLSTPVDRYLEVIHGKTAALFAAACRVGAVVADRP 180 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + AL +G NLG+AFQLVDD LDY + +GK +G+D R GK TLPV+ A++ G+ Sbjct: 181 EAEELALDRFGTNLGMAFQLVDDALDYAADQQILGKTVGDDMREGKITLPVLAAYEAGSA 240 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ FW+ I G+ + +L A ++ + A+ T RA +Y +A D+L PDS + Sbjct: 241 EDRAFWERVIEKGEQTEADLPHALALIEKTGAIATTIARAQAYAAEAVDALSIFPDSELR 300 Query: 308 KSLMEVVDFCLQR 320 + + E V + + R Sbjct: 301 RLMTETVQYTVDR 313 >gi|77361572|ref|YP_341147.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas haloplanktis TAC125] gi|76876483|emb|CAI87705.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas haloplanktis TAC125] Length = 323 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM VN LI ++ SDV ++ + Y++ SGGKR+RPML + A L Y+ Sbjct: 3 IKAIQALIENDMNDVNQLIHAQMRSDVALVNQLGLYIVNSGGKRVRPMLAILAARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H+ LA +EFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ +++F + Sbjct: 63 GKDHITLATIVEFIHTATLLHDDVVDESNLRRGTPTANAEFGNAASVLVGDFIYTRSFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + ++ L+ +AEGE+ QL + D TE Y+ VI SKTA LF AA ++ Sbjct: 123 MVGLGKMQVMQVLADATNIIAEGEVLQLMNCNDPDTTEASYMQVIYSKTAKLFEAATGLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I + AL YGM+LG AFQLVDDVLDY + +++GKNIG+D GKPTLP+I Sbjct: 183 AIITEQNQATLDALNLYGMHLGTAFQLVDDVLDYNADADQLGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G +++ + I +++L++ +++ AL T +A KA L Sbjct: 243 AMQHGNEQQTQLIRDAIEHSN-GMDHLEEILAALKQTNALEFTMQKAELEADKAIACLDF 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L +S +K++L+ + + R Sbjct: 302 LAESEYKQALVSLARIAVDR 321 >gi|119944297|ref|YP_941977.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37] gi|119862901|gb|ABM02378.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37] Length = 331 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ ++ +M +VN LI +++ SDV +I + Y+I SGGKR+RP++T+ A L Sbjct: 11 IKTIQRISATEMNQVNKLITEQLSSDVALINQLGFYIINSGGKRIRPLITVLAAKALGIH 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 N LA IEFIHTATLLHDDVVDDS LRRGK A V+G+ SVLVGDFL +++F M Sbjct: 71 DQNTTKLAAIIEFIHTATLLHDDVVDDSDLRRGKKTANAVFGSAASVLVGDFLYTRSFQM 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + ++ + ++ LS +AEGE+ QL + D TE+ Y+ +I KTA LF AA ++ Sbjct: 131 MTQLRNLKVMDILSSATNIIAEGEVLQLMNCNDPDTTEKKYMDIIYFKTAKLFEAATQLV 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + AL +YG LG AFQL DDV+DY + +EMGKN G+D GKPTLP++ Sbjct: 191 AVLGEQSEEIETALLNYGKYLGTAFQLTDDVMDYNSDASEMGKNTGDDLAEGKPTLPLLY 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G K++ K I G +++ + + + AL + RA KA +L Sbjct: 251 AIQHGNKKQATLIKEAIKKGN-GMDHFDEIMQALHDTNALEYAKKRALEEADKAIKALVI 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDS +K++L+ + R Sbjct: 310 IPDSEYKQALISLAHIAADR 329 >gi|145629957|ref|ZP_01785739.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021] gi|145634043|ref|ZP_01789754.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA] gi|145636989|ref|ZP_01792653.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittHH] gi|145641936|ref|ZP_01797510.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae R3021] gi|148828062|ref|YP_001292815.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG] gi|229844760|ref|ZP_04464899.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1] gi|144984238|gb|EDJ91661.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021] gi|145268487|gb|EDK08480.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA] gi|145269847|gb|EDK09786.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittHH] gi|145273415|gb|EDK13287.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae 22.4-21] gi|148719304|gb|ABR00432.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG] gi|229812474|gb|EEP48164.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1] Length = 323 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 126/317 (39%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 6 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 66 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 126 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 186 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 246 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 305 SEYKQALISLAYLSVDR 321 >gi|91776572|ref|YP_546328.1| trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT] gi|91710559|gb|ABE50487.1| Trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT] Length = 322 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 133/311 (42%), Positives = 189/311 (60%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM+KV+ +I K + SDV +I V Y+I SGGKRLRP L L +A H LA Sbjct: 12 EDMQKVDAVIRKALHSDVVLINQVADYIINSGGKRLRPTLVLLSAGAFGRIEAKHHELAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IE IHT+TLLHDDVVD+S+LRRGK A ++GN SVLVGDF+ S+ F M++ +S Sbjct: 72 IIELIHTSTLLHDDVVDESSLRRGKATANTLFGNAASVLVGDFIYSRTFQMMVGIQSMRV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS T+AEGE+ QL + D+T+E YL VI KTA LF AA + ++I G Sbjct: 132 MEVLSDATNTIAEGEVLQLLNVHDADITDEAYLRVIHYKTAKLFEAATRLGAIICGTDAQ 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A+ YGM LG AFQLVDDVLD G+ +E+GKN+G+D GKPTLP++ A + GT+ + Sbjct: 192 DEAAMAEYGMRLGTAFQLVDDVLDLSGDSSEIGKNLGDDLAEGKPTLPLLYAMRHGTEAQ 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 +++I G ++ L ++ AL A + ++ LP+S++K++ Sbjct: 252 HEIIRNSIEKG--GLQELPAVVEAVKATGALEHVRELAKAEAAAGCAAIMHLPESTYKEA 309 Query: 310 LMEVVDFCLQR 320 L+ + DF + R Sbjct: 310 LLRLADFAVSR 320 >gi|77461082|ref|YP_350589.1| polyprenyl synthetase [Pseudomonas fluorescens Pf0-1] gi|77385085|gb|ABA76598.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1] Length = 322 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 130/312 (41%), Positives = 192/312 (61%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDGIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDMRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANAMWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ +AG Sbjct: 133 KILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALAGATAEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 SEALRTFGDHLGVAFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G I E+L+ I + + +L T A Y +A L LP S ++ +L Sbjct: 253 ALVRQAIQKGGI--EDLESIRIAVEASGSLEYTAQLARDYVARAIKCLDALPASEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|304386506|ref|ZP_07368794.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091] gi|304339335|gb|EFM05407.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091] Length = 324 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 206/332 (62%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++++ S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVDSGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ +ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN +++ + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRSY-FEKIHDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L LPDS K +++++ L R++ Sbjct: 293 VDCAVAALDALPDSEVKDAMIQLAKESLVRVS 324 >gi|309378666|emb|CBX22737.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 324 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 136/332 (40%), Positives = 205/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I SGGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALIAQIGTYIIGSGGKRLRPIMTILAGRS 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDNEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN +++ + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRSY-FEKIHDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L LPDS K++++ + L R++ Sbjct: 293 VDCAVAALDALPDSEAKEAMIRLARESLVRVS 324 >gi|227328594|ref|ZP_03832618.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 296 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 121/261 (46%), Positives = 168/261 (64%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L+Y Sbjct: 3 LEQITALTTQDMAAVNNVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALDYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGK 261 A + G + + + I +G Sbjct: 243 AMRNGNAEQSSLIRKAIEEGN 263 >gi|148826474|ref|YP_001291227.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittEE] gi|148716634|gb|ABQ98844.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittEE] Length = 323 Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 126/317 (39%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 6 IQKLADPDMQKVNQNILAQLNSDVSLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGAN 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 66 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 126 LESLKILGIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 186 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 246 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 305 SEYKQALISLAYLSVDR 321 >gi|261391852|emb|CAX49311.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase; OPP synthetase) [Neisseria meningitidis 8013] Length = 324 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 205/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDEKLYALAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ +ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN +++ + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRSY-FEKIHDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L LPDS K +++++ L R++ Sbjct: 293 VDCAVTALDALPDSEVKDAMIQLAKESLVRVS 324 >gi|309973622|gb|ADO96823.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2846] Length = 329 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 126/317 (39%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVSLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGAN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILGIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 252 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 311 SEYKQALISLAYLSVDR 327 >gi|262277442|ref|ZP_06055235.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114] gi|262224545|gb|EEY75004.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114] Length = 337 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 121/311 (38%), Positives = 192/311 (61%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 ++KV+ I ++ S VE++ ++ +L+ +GGKRLRP+LT+ ++ + Y+G+ H+ LA + Sbjct: 27 LKKVDDHIKLKLSSHVELVGEMATHLMSTGGKRLRPLLTICSSEIFNYKGNRHINLAACV 86 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IH ATLLHDDV+D S RRG +WGN++S+L GD+LLS+ F M+++ SQE L+ Sbjct: 87 ELIHNATLLHDDVIDKSESRRGFKTTNAIWGNKSSILAGDYLLSRCFEMMVDDGSQEVLK 146 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS V+ +A+GE+ QL K +D+ E++YL +I +KTA LF A++ V I N + Sbjct: 147 ILSSVSSEIAQGEIMQLQFEKQVDMVEKNYLDIISAKTASLFGASMRVGGCINDRSNKEK 206 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +AL+SYG NLGI FQ+ DD+LDY + GK IG DF GK TLP+IL FQ+ T +E+ Sbjct: 207 EALESYGRNLGICFQITDDILDYSSKEQVFGKKIGNDFLEGKITLPIILLFQKSTPKERE 266 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + + S + ++ ++ + + + + RA + A DSL + + L Sbjct: 267 MLQKYFSQSVRSENDFEQTLKLINKYQIIETCKKRADYFSNVASDSLSVFEKNFVVEKLQ 326 Query: 312 EVVDFCLQRLN 322 E+ + + RLN Sbjct: 327 ELSFYIVNRLN 337 >gi|251793088|ref|YP_003007814.1| octaprenyl-diphosphate synthase [Aggregatibacter aphrophilus NJ8700] gi|247534481|gb|ACS97727.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Aggregatibacter aphrophilus NJ8700] Length = 323 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 131/320 (40%), Positives = 198/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M ++ L+ DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + Sbjct: 3 MNAIQALSHADMQKVNESILAQLNSDVVLINQLGFYIVQGGGKRIRPLIAVLAARALGFE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 63 GPQAITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + +S + L ++ LAEGE++QL + +EE+Y+ VI SKTA LF A + + Sbjct: 123 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMRVIYSKTARLFEVAAQAA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IAG + QAL+SYG LG AFQLVDDVLDY V +GKN+G+D GKPTLP++ Sbjct: 183 AIIAGSNEAQEQALQSYGRYLGTAFQLVDDVLDYSANVKALGKNVGDDLAEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G +++ + I G E + + IM E+++L RA QKA D+++ Sbjct: 243 AMHHGNEQQAALIREAIEQGG-KREAIDEVLAIMAEHKSLDYAMDRAKQEAQKAVDAIQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 302 LPESEYKQALISLAYLSVDR 321 >gi|114048617|ref|YP_739167.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-7] gi|113890059|gb|ABI44110.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-7] Length = 331 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 136/310 (43%), Positives = 189/310 (60%), Gaps = 1/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+G+ H+ LA Sbjct: 21 DMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVDYQGEAHLKLAAI 80 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M+ E S L Sbjct: 81 IEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELDSMRVL 140 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA +++++AG Sbjct: 141 RVLADTTNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEQ 200 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I A GT+ E+ Sbjct: 201 ETALGDYGKYLGTAFQLTDDLLDYTADSEELGKNIGDDLAEGKPTLPLIYAIAHGTEEEQ 260 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G ++K + AL T+ +A KA +L LPDS++K +L Sbjct: 261 QLIRQAIEQGD-GTHAIEKIVAALHHCGALTYTQQKAIEESNKAIAALSVLPDSNFKTAL 319 Query: 311 MEVVDFCLQR 320 + + + R Sbjct: 320 ISLAKISVDR 329 >gi|270158512|ref|ZP_06187169.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968] gi|289166652|ref|YP_003456790.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] gi|269990537|gb|EEZ96791.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968] gi|288859825|emb|CBJ13806.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] Length = 322 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 122/317 (38%), Positives = 201/317 (63%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L +L +D E VN LI++ I S +++I D+ ++I SGGKRLR +L L + Y G Sbjct: 6 LRNLVSEDFEAVNHLIIETIKSPIQLIDDIANHVIQSGGKRLRCLLVLLASRACGYEGKE 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H++LA IEF HTATLLHDDV+DDS LRRG+ A +WGN+ S+LVGD+L ++ +++E Sbjct: 66 HIMLAAMIEFFHTATLLHDDVIDDSTLRRGRDTANKIWGNKASILVGDYLFTKYLELMVE 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + ++ L +A + GE++Q S N D++ E+Y +I++KTA+LF+A+ + +LI Sbjct: 126 VGDIDIIQLLIGIAPQMGCGEIQQFSNRHNADLSVEEYFDMIRAKTALLFAASSAIGALI 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + ++ +++A+ SYG++LG AFQL+DD LDY + +GKNIG+D GK TLP++ A + Sbjct: 186 SKSEHQIQKAMYSYGLHLGNAFQLIDDALDYCSDAQTIGKNIGDDLATGKITLPLLQALK 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 GT ++ + ++ G ++ +L + E +A+ T A A D+L LPD Sbjct: 246 HGTAEQQIKIRESLEKG--TLLHLPAILAAITETKAIEYTRDIADKEADFAIDALSILPD 303 Query: 304 SSWKKSLMEVVDFCLQR 320 S++K++L+++ + R Sbjct: 304 STYKQALVDLARYAAHR 320 >gi|95929474|ref|ZP_01312217.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM 684] gi|95134590|gb|EAT16246.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM 684] Length = 322 Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 124/296 (41%), Positives = 184/296 (62%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+V +I V +Y++ SGGKR+RPML L A + Y+G++H+ +A +EFIHTATLLHDDV Sbjct: 25 SEVTLIRKVGEYVLASGGKRMRPMLVLLCARLAAYQGESHIGVASVVEFIHTATLLHDDV 84 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VD + LRRG +A VWGN+ SVLVGDFL S++F +++ T S L+ALS +AEGE Sbjct: 85 VDSADLRRGAASANNVWGNEASVLVGDFLFSKSFSIMVRTGSLPILQALSDATTNMAEGE 144 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + QL + +LD++EE Y+ V++ KTAVL +AA ++ GV QAL+ +GM LGIA Sbjct: 145 VLQLISTCDLDLSEERYMQVVRDKTAVLIAAACRCGGILGGVSAEQEQALQEFGMELGIA 204 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ +DD LDY + E GK G D GK TLP+I + ++ E++ + + ++S Sbjct: 205 FQFMDDALDYVADQAEFGKACGHDLEEGKMTLPLIETLRHCSRDERDRVEQIVEKDQLSD 264 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E+L+K ++ + + T RA + AK L D K++L + D+ + R Sbjct: 265 EDLEKVIALIHQYDGIDYTRKRAKQLVESAKQRLAAFEDGEAKQALEILADYVVSR 320 >gi|325132994|gb|EGC55670.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M6190] gi|325136902|gb|EGC59499.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M0579] gi|325138982|gb|EGC61531.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ES14902] Length = 324 Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 205/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDGKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++++ S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVDSDSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ +ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN +++ + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRSY-FEKIHDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L LPDS K +++++ L R++ Sbjct: 293 VDCAVTALDALPDSEVKDAMIQLAKESLVRVS 324 >gi|54307607|ref|YP_128627.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum SS9] gi|46912030|emb|CAG18825.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum SS9] Length = 323 Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 131/319 (41%), Positives = 195/319 (61%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM V+ I ++ SDV +I + Y++ GGKRLRPML + A L Y+G Sbjct: 4 KAIQALTANDMAGVDAKIQAQLNSDVALINQLGFYIVSGGGKRLRPMLVVLAARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H+ A +EFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 64 DKHITAAAFVEFIHTATLLHDDVVDESDMRRGKDTANAAFGNAASVLVGDYIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +S + L+ +S +AEGE++QL + + TE++Y+ VI SKTA LF AA ++S+ Sbjct: 124 TSLRSLKILDIMSEATNVIAEGEVQQLMNCNDPNTTEDNYMQVIYSKTARLFEAATQISA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +I V AL+ YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A Sbjct: 184 IITESSTEVEVALQDYGRYLGTAFQLIDDVLDYVADGKEMGKNVGDDLSEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G + + + I ++ L MRE +L T+ RA +KA +L + Sbjct: 244 MHNGNEAQSAMIREAIEKSN-GMDKLNDILAAMREAGSLEYTQQRAEEEAEKAIAALAPI 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 +S +K++L+++ ++R Sbjct: 303 AESDYKEALIQLAHLAVKR 321 >gi|330811830|ref|YP_004356292.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379938|gb|AEA71288.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 322 Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 129/312 (41%), Positives = 192/312 (61%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDGIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDMRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANAMWGNAPSVLVGDFLYSRSFEMMVELGSMPVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ +AG Sbjct: 133 KILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALAGASAEQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I + GT + Sbjct: 193 SEALRTFGDHLGVAFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G I E+L+ + + + +L T A Y +A L LP S ++ +L Sbjct: 253 ALVRQAIQKGGI--EDLESIRVAVEASGSLDYTANLARGYVARAIKCLDALPASEYRDAL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|260581709|ref|ZP_05849506.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae NT127] gi|260095302|gb|EEW79193.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae NT127] Length = 329 Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 126/317 (39%), Positives = 193/317 (60%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEVQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 252 HGNAQQAALIREAIEQGG-KREAIDEVLAIMAEHKSLDYAMNRAKEEAQKAVDAIEILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 311 SEYKQALISLAYLSVDR 327 >gi|121635537|ref|YP_975782.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18] gi|120867243|emb|CAM11012.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18] Length = 324 Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 205/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDGKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++++ S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVDSDSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ +ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN +++ + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRSY-FEKIHDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L LPDS K +++++ L R++ Sbjct: 293 VDCAVAALDALPDSEVKDAMIQLAKESLVRVS 324 >gi|15676243|ref|NP_273375.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58] gi|161870743|ref|YP_001599916.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442] gi|218768897|ref|YP_002343409.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491] gi|7225547|gb|AAF40771.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58] gi|121052905|emb|CAM09257.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491] gi|161596296|gb|ABX73956.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442] gi|254670157|emb|CBA05202.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha153] gi|316984329|gb|EFV63303.1| polyprenyl synthetase family protein [Neisseria meningitidis H44/76] gi|319411198|emb|CBY91603.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase; OPP synthetase) [Neisseria meningitidis WUE 2594] gi|325128912|gb|EGC51766.1| octaprenyl-diphosphate synthase [Neisseria meningitidis N1568] gi|325140975|gb|EGC63481.1| octaprenyl-diphosphate synthase [Neisseria meningitidis CU385] gi|325198983|gb|ADY94439.1| octaprenyl-diphosphate synthase [Neisseria meningitidis G2136] gi|325199520|gb|ADY94975.1| octaprenyl-diphosphate synthase [Neisseria meningitidis H44/76] Length = 324 Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 205/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ +ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN +++ + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRSY-FEKIHDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L LPDS K +++++ L R++ Sbjct: 293 VDCAVTALDALPDSEVKDAMIQLAKESLVRVS 324 >gi|325203440|gb|ADY98893.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240355] Length = 324 Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 205/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ +ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN +++ + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRSY-FEKIHDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L LPDS K +++++ L R++ Sbjct: 293 VDCAVAALDALPDSEVKDAMIQLAKESLVRVS 324 >gi|309783042|ref|ZP_07677761.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA] gi|308918150|gb|EFP63828.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA] Length = 325 Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 130/311 (41%), Positives = 194/311 (62%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L Y+G++ LA Sbjct: 15 EDMRAVDAVIRRRLGSEVVLINQIGEYIISAGGKRLRPVILLLVANALGYKGEHQHELAA 74 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 75 VVEFIHTATLLHDDVVDESDLRRGRKTANAVFGNAASVLVGDFLYSRAFQMMVQANSMRI 134 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G + Sbjct: 135 MQILADATNIISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAA 194 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ + Sbjct: 195 TEEAAAEYGRRIGTAFQIVDDLLDYTSTADQMGKNAGDDLREGKPTLPLIHLLSNGTEEQ 254 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + I G E+ F ++ + AL T A A+ + LP S ++++ Sbjct: 255 RALVRQAIEQG--GTEHFDAIFAAIQASGALEYTRQAAEREAAAAEAAANALPPSLFRQT 312 Query: 310 LMEVVDFCLQR 320 L+++ F LQR Sbjct: 313 LIDLCAFSLQR 323 >gi|319795463|ref|YP_004157103.1| polyprenyl synthetase [Variovorax paradoxus EPS] gi|315597926|gb|ADU38992.1| Polyprenyl synthetase [Variovorax paradoxus EPS] Length = 330 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 133/301 (44%), Positives = 188/301 (62%), Gaps = 2/301 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL DM +V+ +I +R+ + V ++ V +Y+I +GGKRLRP L L + L Y G+ Sbjct: 16 DLIAGDMVEVDRVIARRLDTGVPLVSQVSQYIISAGGKRLRPALLLLMSGALGYTGEQRF 75 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M+++ Sbjct: 76 NLAAVVEFIHTATLLHDDVVDESTLRRGRATANESFGNPASVLVGDFLYSRAFQMMLDAN 135 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + +E L+ +AEGE+ QL + + E YL VI+SKTA LF A+ +++++AG Sbjct: 136 NIRVMEILAEATNVIAEGEVLQLMNMHDASLDETAYLRVIRSKTAKLFEASTRLAAVLAG 195 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 V V +A +YG LG AFQ++DDVLDY G+ +E GKN+G+D R GK TLP+I A QRG Sbjct: 196 VTPEVEEACATYGQALGTAFQVIDDVLDYAGDAHETGKNVGDDLREGKTTLPLIFAMQRG 255 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + ++ I G + L K I+RE AL + A + ++A D+LR P +S Sbjct: 256 TPEQSGLVRAAIEAGDTA--QLGKVVEIVRETGALDASRAAAAAEAKRAIDALRDFPSNS 313 Query: 306 W 306 Sbjct: 314 H 314 >gi|307611532|emb|CBX01209.1| hypothetical protein LPW_29081 [Legionella pneumophila 130b] Length = 322 Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 123/314 (39%), Positives = 197/314 (62%), Gaps = 2/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+G +H+ Sbjct: 9 LVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYKGKDHIS 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +++E Sbjct: 69 LAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNLMVEVGI 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA + ++ Sbjct: 129 KEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I A Q G Sbjct: 189 PIEIRNSLYNYGLHLGNAFQLIDDALDYCSDATTLGKNIGDDLADGKATLPLIHALQNGN 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ + ++ G +S +L I + + A+ T+ A A +L LPDS + Sbjct: 249 ATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALEILPDSVY 306 Query: 307 KKSLMEVVDFCLQR 320 K++L+++ F L+R Sbjct: 307 KEALVDLAKFALER 320 >gi|331008742|gb|EGH88798.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 322 Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 127/312 (40%), Positives = 186/312 (59%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD S +RRG+ A +WGN VLVGDFL S++F M++E S E + Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPRVLVGDFLYSRSFEMMVELGSMEVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + Sbjct: 133 RILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + G+ + Sbjct: 193 SEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQA 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G +E+L+ + AL T A Y +A L LP S ++ L Sbjct: 253 ALVRQAIQKG--GLEDLESIRNAVESAGALDYTAQLARDYAARAIACLDALPPSEYRDVL 310 Query: 311 MEVVDFCLQRLN 322 +E+ +F + R + Sbjct: 311 VELSEFAVARTH 322 >gi|311109204|ref|YP_003982057.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans A8] gi|310763893|gb|ADP19342.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans A8] Length = 308 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 130/309 (42%), Positives = 185/309 (59%), Gaps = 3/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+ V+ +I +R+ S+V +I + Y+I +GGKR+RP + L A L Y G +H LLA + Sbjct: 1 MKAVDAVIRERLNSEVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYEGTHHQLLAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M++E S + Sbjct: 61 EFIHTATLLHDDVVDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEMMVEANSMRVMS 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V +++AG Sbjct: 121 ILSEATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGATPEQE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 A +YG ++G AFQLVDDVLDY G+ +GKN+G+D R GKPTLP+I + GT ++ Sbjct: 181 AAAAAYGRHVGTAFQLVDDVLDYSGDAAALGKNVGDDLREGKPTLPLIRVMEVGTPEQQQ 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G + A ++ AL A + A+ +L P S + SL+ Sbjct: 241 LIRDAIKTGDADFAAVAAA---IQATDALEHARQAAVAEADLARQALSGYPISPFLNSLL 297 Query: 312 EVVDFCLQR 320 E F + R Sbjct: 298 EFCAFAVNR 306 >gi|54298645|ref|YP_125014.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris] gi|53752430|emb|CAH13862.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris] Length = 322 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 123/317 (38%), Positives = 199/317 (62%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + +L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+G + Sbjct: 6 IRELVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYKGKD 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +++E Sbjct: 66 HISLAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNLMVE 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA + ++ Sbjct: 126 VGIKEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIGPIL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I A Q Sbjct: 186 TNAPIEIRDSLYNYGLHLGNAFQLIDDALDYCSDAATLGKNIGDDLADGKATLPLIHALQ 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + ++ G +S +L I + + A+ T+ A A +L LPD Sbjct: 246 NGNATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALEILPD 303 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+++ F L+R Sbjct: 304 SVYKEALVDLAKFALER 320 >gi|113969238|ref|YP_733031.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-4] gi|113883922|gb|ABI37974.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-4] Length = 331 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 136/310 (43%), Positives = 188/310 (60%), Gaps = 1/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+G+ H+ LA Sbjct: 21 DMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVDYQGEAHLKLAAI 80 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M+ E S L Sbjct: 81 IEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELDSMRVL 140 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA +++++AG Sbjct: 141 RVLADTTNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEQ 200 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I A GT+ E+ Sbjct: 201 ETALGDYGKYLGTAFQLTDDLLDYTADSEELGKNIGDDLAEGKPTLPLIYAIAHGTEEEQ 260 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G ++K + AL T+ +A KA +L LPDS +K +L Sbjct: 261 QLIRQAIEQGD-GTHAIEKIVAALHHCGALTYTQQKAIEESNKAIAALAVLPDSDFKTAL 319 Query: 311 MEVVDFCLQR 320 + + + R Sbjct: 320 ISLAKISVDR 329 >gi|260912975|ref|ZP_05919460.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325] gi|260632965|gb|EEX51131.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325] Length = 358 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 190/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L DM+K N IL ++ S+V +I + Y+I SGGKR+RPM+ + A L Y Sbjct: 38 IETIQQLIQLDMQKTNEAILAQLNSNVALINQLGYYIIQSGGKRIRPMIAILAARALGYT 97 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D + A IEFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ ++AF + Sbjct: 98 SDEPITCATFIEFIHTATLLHDDVVDESELRRGNPTANAEFGNAASVLVGDFIYTRAFQL 157 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE++QL + + TEE+Y+ VI KTA LF AA S Sbjct: 158 MTQLNSLRILKVMSDATNVIAEGEVQQLMNVNDPNTTEENYMQVIYGKTARLFEAATHCS 217 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + +AL+ YG LG AFQLVDD+LDY +GKN+G+D GKPTLP++ Sbjct: 218 AILAKATAAQEKALQDYGRYLGTAFQLVDDILDYSSNAQTLGKNLGDDLAEGKPTLPLLH 277 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + + I G + L IM E+++L RA QKA D++ Sbjct: 278 AMHNGNPEQAKLIRDAIEQGG-KRDILDTVLAIMAEHKSLDYAMNRAKEEAQKAVDAIAL 336 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ +K++L+ + ++R Sbjct: 337 LPENEYKQALISLAYLSVER 356 >gi|117921658|ref|YP_870850.1| polyprenyl synthetase [Shewanella sp. ANA-3] gi|117613990|gb|ABK49444.1| Polyprenyl synthetase [Shewanella sp. ANA-3] Length = 331 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 136/310 (43%), Positives = 188/310 (60%), Gaps = 1/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+G+ H+ LA Sbjct: 21 DMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVDYQGEAHLKLAAI 80 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M+ E S L Sbjct: 81 IEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELDSMRVL 140 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA +++++AG Sbjct: 141 RVLADTTNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEQ 200 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I A GT+ E+ Sbjct: 201 EAALGDYGKYLGTAFQLTDDLLDYTADSEELGKNIGDDLAEGKPTLPLIYAIAHGTEEEQ 260 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G ++K + AL T+ +A KA +L LPDS +K +L Sbjct: 261 QLIRQAIEQGD-GTHAIEKIVAALHHCGALTYTQQKAIEESNKAIAALAVLPDSDFKTAL 319 Query: 311 MEVVDFCLQR 320 + + + R Sbjct: 320 ISLAKISVDR 329 >gi|78223658|ref|YP_385405.1| polyprenyl synthetase [Geobacter metallireducens GS-15] gi|78194913|gb|ABB32680.1| Polyprenyl synthetase [Geobacter metallireducens GS-15] Length = 322 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 126/310 (40%), Positives = 186/310 (60%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D++ V K + SDV +I V +Y++ SGGKR+RP L L A + Y GD HV LA Sbjct: 11 DLKNVEAQFKKDLESDVYLIRKVGEYVLASGGKRIRPTLLLLAAKLCGYTGDRHVPLASV 70 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTATLLHDDVVD++ LRRG +A VWGN+ SVLVGDFL S++F ++++ L Sbjct: 71 IEFIHTATLLHDDVVDNATLRRGNASANEVWGNEASVLVGDFLFSKSFSLMVQAGDLRVL 130 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + +S +AEGE+ QL + +LD+T E Y+ V+KSKTAVL SAA E +++ Sbjct: 131 KVISDATTIIAEGEVLQLLCTSDLDMTLERYIEVVKSKTAVLLSAACEAGAILGKATPEQ 190 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL+ +GM+LGIAFQL+DD LDY + GK IG D GK TLP+I ++ T E+ Sbjct: 191 ELALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIHTLRKCTDEER 250 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + + + + F ++ + + T A Y + K+ L+ P S+ K++ Sbjct: 251 ETIAAVVEKEVMEPGDFEAVFALVHKYGGIQYTTEVAGEYIARCKEHLQAFPASTEKQAA 310 Query: 311 MEVVDFCLQR 320 +++ D+ + R Sbjct: 311 LDLADYVVSR 320 >gi|54295495|ref|YP_127910.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens] gi|148358609|ref|YP_001249816.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str. Corby] gi|53755327|emb|CAH16823.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens] gi|148280382|gb|ABQ54470.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str. Corby] Length = 322 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 123/314 (39%), Positives = 197/314 (62%), Gaps = 2/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+G +H+ Sbjct: 9 LVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYKGKDHIS 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +++E Sbjct: 69 LAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNLMVEVGI 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA + ++ Sbjct: 129 KEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I A Q G Sbjct: 189 PIEIRNSLYNYGLHLGNAFQLIDDALDYCSDAATLGKNIGDDLADGKATLPLIHALQNGN 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ + ++ G +S +L I + + A+ T+ A A +L LPDS + Sbjct: 249 ATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALEILPDSVY 306 Query: 307 KKSLMEVVDFCLQR 320 K++L+++ F L+R Sbjct: 307 KEALVDLAKFALER 320 >gi|220936362|ref|YP_002515261.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] gi|219997672|gb|ACL74274.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 322 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 137/314 (43%), Positives = 187/314 (59%), Gaps = 2/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN I +R+ S V +I + Y+I SGGKRLRP+L L +A H+ Sbjct: 9 LVADDMNAVNDRIRERLQSSVVLINQLGHYIINSGGKRLRPLLVLLSARACGAGDRRHID 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IEFIHTATLLHDDVVD S LRRG+ A ++GN+ SVLVGDFL S++F M++E S Sbjct: 69 LAAIIEFIHTATLLHDDVVDASELRRGRETANALFGNEASVLVGDFLYSRSFEMMVEIGS 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E L+ T+AEGE+ QL + D EE Y+ VI+SKTA LF AA + +++ G Sbjct: 129 MRVMEILAHTTNTIAEGEVLQLLNCHDADTPEERYMEVIQSKTAKLFEAAARIGAVLGGQ 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 SV QA+ +YGM+LG AFQL+DDVLDY EMGKN+G+D GKPTLP+I A + G Sbjct: 189 PESVEQAMAAYGMHLGTAFQLIDDVLDYGASAEEMGKNMGDDLAEGKPTLPLIHAMRVGD 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + I G + + I++ +L T A + +A SL LPD+ Sbjct: 249 ADQAGLIREAIEQGGRDYAD--RVLGIIQATGSLDYTRAVAAAEADRAAASLAVLPDTPE 306 Query: 307 KKSLMEVVDFCLQR 320 +++L + F + R Sbjct: 307 RQALEFLARFSVTR 320 >gi|270159180|ref|ZP_06187836.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968] gi|289165992|ref|YP_003456130.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] gi|269987519|gb|EEZ93774.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968] gi|288859165|emb|CBJ13094.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] Length = 322 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 123/310 (39%), Positives = 197/310 (63%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D VN LI+ +I S + +I + ++I SGGKRLRP+L L T+ Y+G +H+ LA Sbjct: 13 DFNAVNNLIINKIESQIGLIDKMSHHMIESGGKRLRPLLVLLTSNACGYQGQDHIDLAAM 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EF HTATLLHDDV+D+S LRRG+ A +WG++ S+LVGD+L +Q+ ++++ + E L Sbjct: 73 VEFFHTATLLHDDVIDESTLRRGRQTANNIWGSKASILVGDYLFTQSIELMVDINNPEVL 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + + A ++ GE++QL+ N +T E+Y VI++KTA+LF+AA + +++ + Sbjct: 133 KLFARTALEISCGEVKQLTNRHNPALTFEEYFDVIRAKTALLFAAAACIGPILSNSSKEM 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + AL +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I A Q GT+ +K Sbjct: 193 QNALYAYGLHLGNAFQLIDDALDYCSDAKTIGKNIGDDLADGKATLPLIYALQHGTEVQK 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + ++ G +++ L + + E +A+ T+ A A +L LPDS +K +L Sbjct: 253 QQIEESLKHG--TLDFLPEILGALEETKAIEYTKGIAAKEVNTAISNLALLPDSKYKNAL 310 Query: 311 MEVVDFCLQR 320 +E+ F L R Sbjct: 311 IELAQFALLR 320 >gi|85058340|ref|YP_454042.1| octaprenyl diphosphate synthase [Sodalis glossinidius str. 'morsitans'] gi|84778860|dbj|BAE73637.1| octaprenyl-diphosphate synthase [Sodalis glossinidius str. 'morsitans'] Length = 323 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 131/320 (40%), Positives = 188/320 (58%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM +VN I +++ S+V +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 IEQITELTAQDMAEVNTAIREQLNSEVALINQLGHYIISGGGKRIRPMIAVLAARALHYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GKQHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S LE +S +AEGE+ QL + D+T ++Y+ VI SKTA LF AA + S Sbjct: 123 MTALESLRVLELMSEAVNIIAEGEVLQLMNCNDPDITIDNYMRVIYSKTARLFEAASQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAGADACQEAALRDYGRYLGTAFQLIDDLLDYGADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I G L+ M + +L T A KA L C Sbjct: 243 AMRNGTPEQAALIRQAIEQGN-GRHLLETVLKTMHQCDSLGYTRRCAEEEADKAIACLDC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L S ++ +L + +QR Sbjct: 302 LSPSPYRDALESLAHVAVQR 321 >gi|37678653|ref|NP_933262.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] gi|37197393|dbj|BAC93233.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] Length = 306 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 124/296 (41%), Positives = 180/296 (60%), Gaps = 1/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 +DV +I + Y+I GGKRLRP+L + +A L Y+G+ H A IEFIHTATLLHDDV Sbjct: 10 NDVSLINQLGFYIISGGGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV 69 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VD+S +RRGK A +GN SVLVGDF+ +++F M+ E S + L+ +S +AEGE Sbjct: 70 VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNIIAEGE 129 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + QL + D TEE Y+ VI SKTA LF AA ++ +++ V AL++YG LG A Sbjct: 130 VLQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTA 189 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQL+DDV+DY + EMGKN+G+D GKPTLP++ A + + I + + Sbjct: 190 FQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLHAMRHTNAENAQMIREAIENAN-GM 248 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E L +M++ +L TE +A KA L+ LP+S +K++L+ + ++R Sbjct: 249 ERLDDILAVMQQAGSLTYTEAKAMEEADKAIAELQVLPESEYKQALIALAHMAVKR 304 >gi|52842862|ref|YP_096661.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629973|gb|AAU28714.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 322 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 123/314 (39%), Positives = 197/314 (62%), Gaps = 2/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+G +H+ Sbjct: 9 LVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYKGKDHIS 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +++E Sbjct: 69 LAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNLMVEVGI 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA + ++ Sbjct: 129 KEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I A Q G Sbjct: 189 PIELRNSLYNYGLHLGNAFQLIDDALDYCSDAATLGKNIGDDLADGKATLPLIHALQNGN 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ + ++ G +S +L I + + A+ T+ A A +L LPDS + Sbjct: 249 ATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALEILPDSVY 306 Query: 307 KKSLMEVVDFCLQR 320 K++L+++ F L+R Sbjct: 307 KEALVDLAKFALER 320 >gi|296108301|ref|YP_003620002.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila 2300/99 Alcoy] gi|295650203|gb|ADG26050.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila 2300/99 Alcoy] Length = 322 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 123/314 (39%), Positives = 197/314 (62%), Gaps = 2/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+G +H+ Sbjct: 9 LVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYKGKDHIS 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +++E Sbjct: 69 LAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNLMVEVGI 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA + ++ Sbjct: 129 KEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I A Q G Sbjct: 189 PIEIRDSLYNYGLHLGNAFQLIDDALDYCSDAATLGKNIGDDLADGKATLPLIHALQNGN 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ + ++ G +S +L I + + A+ T+ A A +L LPDS + Sbjct: 249 ATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALGILPDSVY 306 Query: 307 KKSLMEVVDFCLQR 320 K++L+++ F L+R Sbjct: 307 KEALVDLAKFALER 320 >gi|254427749|ref|ZP_05041456.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881] gi|196193918|gb|EDX88877.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881] Length = 323 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 127/311 (40%), Positives = 191/311 (61%), Gaps = 3/311 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D E VN I + S+V +I +V Y+I SGGKRLRP++ + A Y+GD HV +A Sbjct: 13 DFEAVNQFISHHLDSNVPLIREVGDYIIQSGGKRLRPLIAILCARAAGYQGDRHVDVAAI 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD+S LRRG+ VWGN SVLVGDFL+S+A +++ + L Sbjct: 73 IEFLHTATLLHDDVVDESNLRRGRPTVNAVWGNAASVLVGDFLISRALQLMVALRHPRLL 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + S T++EGE+ QL ++ + +EE+Y+ VI KTA +F +A E +++ + S Sbjct: 133 DIFSQSTNTISEGEVLQLINVRDPNTSEENYMRVIHHKTAKMFESAAETGAVLGADEVSD 192 Query: 191 R-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A +YG +LGIAFQL+DDVLDY+G+ +E+GKN+G+D GKPTLP+I G+ + Sbjct: 193 HVDAFATYGRHLGIAFQLIDDVLDYQGDASELGKNVGDDLAEGKPTLPLIYTIANGSPEQ 252 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 K I G +E+L++ +R + L T +A + A +++ +P S +K + Sbjct: 253 ATLIKDAIRSG--GLEHLEQIVETVRASGGLQYTVDKAAEQTRIALEAIAQVPASPYKDA 310 Query: 310 LMEVVDFCLQR 320 L + + L+R Sbjct: 311 LFRLAEESLKR 321 >gi|261379260|ref|ZP_05983833.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703] gi|284797691|gb|EFC53038.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703] Length = 324 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 132/332 (39%), Positives = 203/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPDDLAKVNAVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + + + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGHDDEKLYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYVQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ---- 292 P+I + G+++ ND + ++EN +++ + + +V+++ YS + Sbjct: 241 PLIYLMRNGSEQ-------AANDVRYALENADRSY-FEKIHDYVVNSDALPYSISEAKKA 292 Query: 293 --KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA SL LPDS K++++++ L R++ Sbjct: 293 VDKAIASLDVLPDSEVKEAMIQLAKESLARVS 324 >gi|322418219|ref|YP_004197442.1| poluprenyl synthetase [Geobacter sp. M18] gi|320124606|gb|ADW12166.1| Polyprenyl synthetase [Geobacter sp. M18] Length = 322 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 123/312 (39%), Positives = 189/312 (60%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D++ V K + SDV +I V +Y++ SGGKR+RP L L A + Y G V LA Sbjct: 10 EDLKNVELQFKKDLQSDVPLIRKVGEYVLSSGGKRIRPALVLLAARLCGYDGSRSVPLAS 69 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F +++ Sbjct: 70 VVEFIHTATLLHDDVVDNANLRRGLASANTLWGNEASVLVGDFLFSKSFSLMVTDGDLGI 129 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ +AEGE+ QL + +LD+T E Y+ V++SKTA+L SAA EV +++ G + Sbjct: 130 LKVLADATTMIAEGEVLQLVCTSDLDITVERYIEVVRSKTAILLSAACEVGAILGGAEPG 189 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +RQA+ YGM+LGIAFQL+DD LDY + GK+IG D GK TLP+I ++ + E Sbjct: 190 LRQAVADYGMDLGIAFQLMDDTLDYTASQEQFGKSIGHDLEEGKITLPLIHTLKQCSDEE 249 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 ++ S + +S E+ + +++ + T A + K L P S +++ Sbjct: 250 RDLIASVVEKDLLSDEDFELVLALVQRYGGIEHTVASAGEHVALCKKHLEKFPPSQAREA 309 Query: 310 LMEVVDFCLQRL 321 + ++ D+ + R+ Sbjct: 310 MADLADYVVTRV 321 >gi|241760794|ref|ZP_04758885.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114] gi|241318691|gb|EER55243.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114] Length = 324 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 132/332 (39%), Positives = 203/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPDDLAKVNAVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + + + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGHDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYVQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASTEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ---- 292 P+I + G+++ ND + ++EN +++ + + +V+++ YS + Sbjct: 241 PLIYLMRNGSEQ-------AANDVRHALENADRSY-FEKIHDYVVNSDALPYSISEAKKA 292 Query: 293 --KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA SL LPDS K++++++ L R++ Sbjct: 293 VDKAIASLDVLPDSEVKEAMIQLAKESLARVS 324 >gi|67459231|ref|YP_246855.1| octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2] gi|67004764|gb|AAY61690.1| Octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2] Length = 327 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 136/329 (41%), Positives = 208/329 (63%), Gaps = 17/329 (5%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K+ +DL ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+ Sbjct: 5 VKIQQDLK-DEVTKLNDLIISCLKSDEELIETVGKYLLEAGGKRIRPLLTIITAKMFDYK 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F + Sbjct: 64 GDNHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + S +A+ L+ + ++EGE+ QL L++ +T ++Y ++KSKTA LF A+ EV Sbjct: 124 MVASGSIKAMNVLAKASAIISEGEVIQLVKLNERRIITIDEYQQIVKSKTAELFGASCEV 183 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I Sbjct: 184 GAIIAEQVDHISKDMRDFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLI 243 Query: 240 LAFQRGTKREKNFWKSTI-------NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292 + + +++K W I ND I V L M E+ +T + Sbjct: 244 FLYNK-LEQDKQLWLENIIKCDKRTNDEFIKVREL------MIEHEIHNETVSYLSNLEN 296 Query: 293 KAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320 +A L +P +S+K L ++ F L R Sbjct: 297 EANKLLNKIPVQNSYKDYLFSIIRFILDR 325 >gi|297518736|ref|ZP_06937122.1| octaprenyl diphosphate synthase [Escherichia coli OP50] Length = 286 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 122/285 (42%), Positives = 173/285 (60%), Gaps = 1/285 (0%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GGKR+RPM+ + A + Y G+ HV +A IEFIHTATLLHDDVVD+S +RRGK Sbjct: 1 YIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKA 60 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A +GN SVLVGDF+ ++AF M+ S + LE +S +AEGE+ QL + D Sbjct: 61 TANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPD 120 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 +TEE+Y+ VI SKTA LF AA + S ++AG + L+ YG LG AFQL+DD+LDY Sbjct: 121 ITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYN 180 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 + ++GKN+G+D GKPTLP++ A GT + ++ I G L+ M Sbjct: 181 ADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMN 239 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +L T RA KA +L+ LPD+ W+++L+ + +QR Sbjct: 240 ACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQR 284 >gi|319639120|ref|ZP_07993876.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102] gi|317399597|gb|EFV80262.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102] Length = 324 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 132/332 (39%), Positives = 203/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPDDLAKVNAVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + + + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGHDDEKLYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYVQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ---- 292 P+I + G+++ ND + ++EN +++ + + +V+++ YS + Sbjct: 241 PLIYLMRNGSEQ-------AANDVRHALENADRSY-FEKIHDYVVNSDALPYSISEAKKA 292 Query: 293 --KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA SL LPDS K++++++ L R++ Sbjct: 293 VDKAIASLDVLPDSEVKEAMIQLAKESLARVS 324 >gi|91786742|ref|YP_547694.1| trans-hexaprenyltranstransferase [Polaromonas sp. JS666] gi|91695967|gb|ABE42796.1| Trans-hexaprenyltranstransferase [Polaromonas sp. JS666] Length = 327 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 134/309 (43%), Positives = 193/309 (62%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M ++ +I +R+ SDV ++ V +Y++ +GGKRLRP L L L YRGD LA + Sbjct: 19 MRGMDAVIERRLKSDVPLVSQVSQYIVAAGGKRLRPALLLLMCGALGYRGDQRYNLAAVV 78 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M++E ++ Sbjct: 79 EFIHTATLLHDDVVDESTLRRGRATANEAFGNPASVLVGDFLYSRAFQMMVEAGDMRVMQ 138 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ +AEGE+ QL + ++E+ YL VI+SKTA LF A+ +++L+A V Sbjct: 139 TLAEATNVIAEGEVLQLMNMHDATLSEDGYLRVIRSKTAKLFEASARLAALLAQSPPPVE 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 Q+ YG LG AFQ++DDVLDY G+V+EMGKN+G+D R GK TLP+I+A QR T+ E+ Sbjct: 199 QSCADYGQALGTAFQVIDDVLDYDGDVSEMGKNLGDDLREGKTTLPLIIAMQRCTELERA 258 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G + + + I+++ AL T A + Q+A D+L+ LP + + +L Sbjct: 259 VIRRAIETG--GTDQMPQIIAIVQQTGALQATRDAAAAEAQRALDALQVLPQNPYSNALG 316 Query: 312 EVVDFCLQR 320 + LQR Sbjct: 317 HLASQLLQR 325 >gi|293398312|ref|ZP_06642503.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62] gi|291611236|gb|EFF40320.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62] Length = 324 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 202/332 (60%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN + + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRGY-FEKIRDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L L DS K +++++ L R++ Sbjct: 293 VDCAVAALDALSDSEVKDAMIQLAKESLVRVS 324 >gi|71891880|ref|YP_277610.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795986|gb|AAZ40737.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 323 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 128/318 (40%), Positives = 192/318 (60%), Gaps = 1/318 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + +LT +DME VN I R+ S++ +I +V+Y++ SGGKR+RPM+TL TA L Y+ Sbjct: 6 ISELTEQDMEDVNSEIRTRLASEITLINKLVQYIVDSGGKRIRPMITLLTARALCYKKTQ 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV +A IEFIHTATLLHDDVVD S +RRG+ +++GN SVLVGDF+ ++AF M+ E Sbjct: 66 HVTIATLIEFIHTATLLHDDVVDKSHMRRGRKTTNIIFGNAASVLVGDFIYTRAFQMMTE 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S L ++ +A GE+ QL+ + +T + Y+ +I SKTA LF A + S+++ Sbjct: 126 LESLRILSLMADAVNIIAAGEILQLTHCNDPTITIDSYMKIIYSKTARLFEVASQSSAIL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A +AL++YG +GIAFQLVDDVLDY GKN+G D GK TLP++ A Sbjct: 186 ADANTCQEKALRNYGRYMGIAFQLVDDVLDYSASETIFGKNVGNDLNEGKLTLPLLHAIH 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 T ++ + +I +G L M ++ +L T RA + +KA L LP Sbjct: 246 HSTSKQASLIIQSIKEGN-HRHLLNIILDTMHQHGSLEYTRKRAETEIKKAISCLDILPP 304 Query: 304 SSWKKSLMEVVDFCLQRL 321 S ++++L + + +QR+ Sbjct: 305 SPYRQALASLATYTVQRI 322 >gi|225075990|ref|ZP_03719189.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens NRL30031/H210] gi|224952705|gb|EEG33914.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens NRL30031/H210] Length = 324 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 133/332 (40%), Positives = 201/332 (60%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPDDLAKVNVVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + + + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGHDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE YL VI+ KTA LF AA Sbjct: 121 AFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYLQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ---- 292 P+I + G++ ND + ++EN +++ + + +V+++ YS + Sbjct: 241 PLIYLMRNGSEL-------AANDVRHALENADRSY-FEKIHDYVVNSDALPYSISEAKKA 292 Query: 293 --KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA SL LPDS K +++++ L R++ Sbjct: 293 VDKAIASLNVLPDSEVKDAMIQLAKESLARVS 324 >gi|325267223|ref|ZP_08133886.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394] gi|324981284|gb|EGC16933.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394] Length = 324 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 127/315 (40%), Positives = 197/315 (62%), Gaps = 12/315 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ +VN +I + + SDV +I + Y+I SGGKRLRP+LT+ + L Y D LA Sbjct: 15 DLSRVNVVINRAVQSDVALISQIGTYIIGSGGKRLRPILTILSGKCLGYDDDKLYSLAAM 74 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S + L Sbjct: 75 VEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVGSGSLKIL 134 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E ++ +AEGE+ QL N+D+TE+ YL VI+ KTA LF AA +V +++AG + Sbjct: 135 EVMADATNIIAEGEVMQLMNIGNVDITEQQYLQVIQYKTAKLFEAAAQVGAILAGADDEQ 194 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +ALK +GM +G AFQ+VDDVLDY G V ++GKN+G+D GKPTLP+I Q+G++ + Sbjct: 195 ERALKEFGMYMGTAFQIVDDVLDYSGSVEQIGKNVGDDLAEGKPTLPLIYLMQQGSQAAR 254 Query: 251 NFWKSTINDGKISVENLKKAFI-----IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 D + +++N +A+ + E+ L +A +A L+ LPD+ Sbjct: 255 -------QDVRTALQNADRAYFDKIHQYVTESDVLEYCMTQAKEAVNQAIHCLKRLPDNE 307 Query: 306 WKKSLMEVVDFCLQR 320 +++ ++ + + R Sbjct: 308 VTQAMRQMAELSVVR 322 >gi|59802000|ref|YP_208712.1| IspB [Neisseria gonorrhoeae FA 1090] gi|194099557|ref|YP_002002687.1| IspB [Neisseria gonorrhoeae NCCP11945] gi|239999762|ref|ZP_04719686.1| IspB [Neisseria gonorrhoeae 35/02] gi|240014919|ref|ZP_04721832.1| IspB [Neisseria gonorrhoeae DGI18] gi|240081510|ref|ZP_04726053.1| IspB [Neisseria gonorrhoeae FA19] gi|240113789|ref|ZP_04728279.1| IspB [Neisseria gonorrhoeae MS11] gi|240116523|ref|ZP_04730585.1| IspB [Neisseria gonorrhoeae PID18] gi|240118747|ref|ZP_04732809.1| IspB [Neisseria gonorrhoeae PID1] gi|240121989|ref|ZP_04734951.1| IspB [Neisseria gonorrhoeae PID24-1] gi|240124286|ref|ZP_04737242.1| IspB [Neisseria gonorrhoeae PID332] gi|240126497|ref|ZP_04739383.1| IspB [Neisseria gonorrhoeae SK-92-679] gi|240128960|ref|ZP_04741621.1| IspB [Neisseria gonorrhoeae SK-93-1035] gi|254494548|ref|ZP_05107719.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291] gi|260439720|ref|ZP_05793536.1| IspB [Neisseria gonorrhoeae DGI2] gi|268595575|ref|ZP_06129742.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02] gi|268597610|ref|ZP_06131777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19] gi|268599861|ref|ZP_06134028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11] gi|268602196|ref|ZP_06136363.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18] gi|268604462|ref|ZP_06138629.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1] gi|268682915|ref|ZP_06149777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332] gi|268685081|ref|ZP_06151943.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679] gi|268687344|ref|ZP_06154206.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035] gi|291042968|ref|ZP_06568706.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2] gi|59718895|gb|AAW90300.1| putative octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA 1090] gi|193934847|gb|ACF30671.1| IspB [Neisseria gonorrhoeae NCCP11945] gi|226513588|gb|EEH62933.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291] gi|268548964|gb|EEZ44382.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02] gi|268551398|gb|EEZ46417.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19] gi|268583992|gb|EEZ48668.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11] gi|268586327|gb|EEZ51003.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18] gi|268588593|gb|EEZ53269.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1] gi|268623199|gb|EEZ55599.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332] gi|268625365|gb|EEZ57765.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679] gi|268627628|gb|EEZ60028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035] gi|291013107|gb|EFE05076.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2] gi|317165053|gb|ADV08594.1| IspB [Neisseria gonorrhoeae TCDC-NG08107] Length = 324 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 202/332 (60%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIRVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G+++ ND + ++EN + + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQGSEQ-------VANDVRTALENADRGY-FEKIRDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L L DS K +++++ L R++ Sbjct: 293 VDCAVAALDALSDSEVKDAMIQLAKESLVRVS 324 >gi|148265763|ref|YP_001232469.1| polyprenyl synthetase [Geobacter uraniireducens Rf4] gi|146399263|gb|ABQ27896.1| Polyprenyl synthetase [Geobacter uraniireducens Rf4] Length = 322 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 128/312 (41%), Positives = 184/312 (58%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D++ V K + SDV +I V +Y++ SGGKR+RP L L +A + Y GD HV LA Sbjct: 10 EDLKNVELQFKKDLQSDVPLIRKVGEYVLSSGGKRIRPALLLLSAKLCGYHGDRHVPLAS 69 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F +++ Sbjct: 70 VIEFIHTATLLHDDVVDNANLRRGLASANTLWGNEASVLVGDFLFSKSFSLMVADGDLNV 129 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ LS +AEGE+ QL + +LDVT E Y+ V+KSKTA+L SAA + +++ + Sbjct: 130 LKVLSGATTIIAEGEVLQLVCTSDLDVTTERYIEVVKSKTAILLSAACQSGAILGKASSE 189 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL+++GM LGIAFQLVDD LDY + GK+IG D GK TLP+I Q T E Sbjct: 190 REVALQNFGMELGIAFQLVDDTLDYVASEEQFGKSIGHDLEEGKITLPLIHTLQHCTAAE 249 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 K ++ + ++ F ++ + + A Y + K L DS K + Sbjct: 250 KEKIAEVVDKDVLDEDDFAAVFELVHQYGGIDHAVTVAKDYVARCKAYLDVFEDSPEKYA 309 Query: 310 LMEVVDFCLQRL 321 L+ + D+ + R+ Sbjct: 310 LVNLADYVVTRV 321 >gi|240017367|ref|ZP_04723907.1| IspB [Neisseria gonorrhoeae FA6140] Length = 324 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 201/332 (60%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIRVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTL Sbjct: 181 AQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KA 294 P+I ++G ++ ND + ++EN + + + +V ++ AYS G+ KA Sbjct: 241 PLIYLMRQG-------FEQVANDVRTALENADRGY-FEKIRDYVVRSDALAYSIGEARKA 292 Query: 295 KD----SLRCLPDSSWKKSLMEVVDFCLQRLN 322 D +L L DS K +++++ L R++ Sbjct: 293 VDCAVAALDALSDSEVKDAMIQLAKESLVRVS 324 >gi|238757559|ref|ZP_04618744.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236] gi|238704321|gb|EEP96853.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236] Length = 323 Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 131/315 (41%), Positives = 188/315 (59%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+G H+ Sbjct: 8 ELTAPDMAAVNATILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALHYKGSKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ ++AF M+ + Sbjct: 68 TVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRAFQMMTGLE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + ++++A Sbjct: 128 SLRVLTLMSAATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAAAQSAAVLAE 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ A G Sbjct: 188 ASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLHAMHNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + + I G L+ M++ +L T RA KA +L+ LP++ Sbjct: 248 TSEQALMIRQAIEQGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAIAALQILPENE 306 Query: 306 WKKSLMEVVDFCLQR 320 ++++L + +QR Sbjct: 307 YRQALEGLAHIAVQR 321 >gi|51473666|ref|YP_067423.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington] gi|51459978|gb|AAU03941.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington] Length = 327 Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 131/322 (40%), Positives = 209/322 (64%), Gaps = 3/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K+ +DL +++ ++N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+ Sbjct: 5 VKIQQDLK-EEVTQLNDLIISCLKSDTELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYK 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA A+EFIH ATLLHDDVVDDS LRR K ++WG++TS+LVGDFL SQ+F + Sbjct: 64 GDNHIKLASAVEFIHAATLLHDDVVDDSTLRRFKPTVNVIWGSKTSILVGDFLFSQSFKL 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 +I + +A+ L+ + ++EGE+ QL L++ +T ++Y ++KSKTA LF AA EV Sbjct: 124 MIASGCIKAMNVLARASVIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGAACEV 183 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++IA + V + ++ +GM LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I Sbjct: 184 GAIIAEQVDRVSEDVQDFGMLLGTIFQVIDDLLDYLGSDKQVGKNIGDDFLEGKVTLPLI 243 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + + + +K + ++ I K + ++ K +M ++ +T S +A + L Sbjct: 244 FLYHKLEQDKKLWLENMIKSDKRTKDDFIKIRDLMLKHAIYNETVNYLSSLENEANNLLN 303 Query: 300 CLP-DSSWKKSLMEVVDFCLQR 320 +P + +K L ++ F L R Sbjct: 304 KIPVQNIYKYYLFSIIRFILYR 325 >gi|257092398|ref|YP_003166039.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044922|gb|ACV34110.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 320 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 187/320 (58%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ +L DM V+ +I +R+ SD+ ++ V +Y+I GGKRLRP L L A L+YR Sbjct: 1 MEQFYNLIELDMTAVDAVIRRRLHSDIALVRQVAEYIIQGGGKRLRPALVLLAAGALDYR 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA IEFIHTATLLHDDVVD S LRRG+ A ++GN SVLVGDFL S+AF M Sbjct: 61 GTHHHELAAVIEFIHTATLLHDDVVDGSDLRRGRDTANAIFGNSASVLVGDFLYSRAFQM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + LS +AEGE+ QL + DV E YL VI+ KTA LF AA ++ Sbjct: 121 MVAVDDMRVMRVLSDATNVIAEGEVLQLMNCHDADVDEAGYLQVIRYKTAKLFEAAAQLG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I G + Q + +YG++LG AFQL+DDVLDY G E GK++G+D GKPTLP+I Sbjct: 181 AIIGGGSAAAEQGMATYGIHLGTAFQLIDDVLDYSGAEVETGKHLGDDLAEGKPTLPLIF 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q G + + I G ++ +R AL +A + + A +L Sbjct: 241 VLQHGNTEQAACVRRAIESG--GRDDFPNVLAAIRATGALDYARRKARAEAELAAAALSV 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +P S +K SL+E+ F + R Sbjct: 299 VPASQYKDSLLELSLFAVAR 318 >gi|94312038|ref|YP_585248.1| polyprenyl synthetase [Cupriavidus metallidurans CH34] gi|93355890|gb|ABF09979.1| octaprenyl diphosphate synthase [Cupriavidus metallidurans CH34] Length = 325 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 132/310 (42%), Positives = 190/310 (61%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L +A +Y G H LA Sbjct: 16 DMRAVDAVIRRRLSSEVPLIEQIGEYIIGAGGKRLRPVILLLSARAFDYEGHRHHELAAV 75 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M++E S + Sbjct: 76 VEFIHTATLLHDDVVDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMVEAGSMRIM 135 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS +AEGE+ QL + +VT E YL VI+ KTA LF A+ ++ +++AG + Sbjct: 136 EILSNATNVIAEGEVLQLLNMHDPEVTVERYLQVIRYKTAKLFEASAQLGAVLAGADAEM 195 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++ + GT +++ Sbjct: 196 EEAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLLEHGTAQQR 255 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G E+ F + + AL T A + A+ + PDS K++L Sbjct: 256 ELARDAIVQG--GTEHFDAVFSAIHASGALDVTFAAAQREAEAAEKAAMQFPDSPLKQTL 313 Query: 311 MEVVDFCLQR 320 +++ F LQR Sbjct: 314 IDLCAFSLQR 323 >gi|261868528|ref|YP_003256450.1| octaprenyl-diphosphate synthase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413860|gb|ACX83231.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Aggregatibacter actinomycetemcomitans D11S-1] Length = 329 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MK ++ L+ DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + Sbjct: 9 MKAIQALSHGDMQKVNESILAQLNSDVALINQLGFYIVQGGGKRIRPLIAVLAARALGFD 68 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 69 GQQAITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + +S + L ++ LAEGE++QL + +EE+Y+ VI SKTA LF A + + Sbjct: 129 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMRVIYSKTARLFEVAAQAA 188 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IAG ++ +AL++YG LG AFQLVDDVLDY N +GKN+G+D GKPTLP++ Sbjct: 189 AIIAGADDTQEKALQNYGRYLGTAFQLVDDVLDYSANANALGKNVGDDLAEGKPTLPLLH 248 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G ++ + I G + + IM E+ +L RA QKA D+++C Sbjct: 249 AMHHGNAQQAALIRKAIEQGG-RRDAIDDVLAIMAEHNSLDYAMNRAKQEAQKAVDAIQC 307 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K +L+ + + R Sbjct: 308 LPESEYKLALISLAYLSVDR 327 >gi|300721522|ref|YP_003710797.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC 19061] gi|297628014|emb|CBJ88563.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC 19061] Length = 323 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 128/316 (40%), Positives = 185/316 (58%), Gaps = 1/316 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + L+ + H+ Sbjct: 9 LTADDMAAVNETILNQLNSDVALINQLGYYIISGGGKRIRPMIAVLAGKALQCGDEKHIK 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A IEFIHTATLLHDDVVD+S +RRGK A ++GN SVLVGDF+ +++F M+ + S Sbjct: 69 VAALIEFIHTATLLHDDVVDESDMRRGKETANAIYGNAASVLVGDFIYTRSFQMMTDLDS 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ +S +AEGE+ QL + D++E+DY+ VI SKTA LF A ++++A Sbjct: 129 MRVLKLMSDATNVIAEGEVMQLMNCNDPDISEDDYMRVIYSKTARLFEVAAHSAAILANA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 AL+ YG LG AFQL+DD+LDY + N +GKN G+D GKPTLP++ A GT Sbjct: 189 TPEQEIALRDYGCYLGTAFQLIDDLLDYDSDNNTLGKNTGDDLNEGKPTLPLLHAMNHGT 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + I G L M++ +L T RA KA +L+ L DS + Sbjct: 249 PEQSALIRDAIEKGN-GRHLLDTVLATMKQCGSLKYTRQRAEEEADKAISALQILDDSPY 307 Query: 307 KKSLMEVVDFCLQRLN 322 K +L+ + +QR++ Sbjct: 308 KAALVGLAHIAVQRVS 323 >gi|157964658|ref|YP_001499482.1| octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5] gi|157844434|gb|ABV84935.1| Octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5] Length = 363 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 132/316 (41%), Positives = 206/316 (65%), Gaps = 5/316 (1%) Query: 9 LKD-MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 LKD + K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+GDNH+ L Sbjct: 47 LKDAVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGDNHIKL 106 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F +++ + S Sbjct: 107 ASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMVASGSI 166 Query: 128 EALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +A+ L+ + ++EGE+ QL L++ +T ++Y ++KSKTA LF AA EV ++IA Sbjct: 167 KAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGAACEVGAIIAEQ 226 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I + + Sbjct: 227 VDHISKDMQDFGKLLGTIFQVIDDLLDYLGNDKQIGKNIGDDFLEGKVTLPLIFLYNK-L 285 Query: 247 KREKNFW-KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DS 304 +++K W ++ I K + ++ K +M ++ +T + +A L +P + Sbjct: 286 EQDKQLWLENIIKCDKRTKDDFVKIHDLMVKHEIYNETVNYLSNLENEASKLLNKIPVQN 345 Query: 305 SWKKSLMEVVDFCLQR 320 +K L ++ F L R Sbjct: 346 IYKDYLFSMIKFILDR 361 >gi|153825628|ref|ZP_01978295.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2] gi|149740658|gb|EDM54765.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2] Length = 304 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 125/302 (41%), Positives = 179/302 (59%), Gaps = 1/302 (0%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 I + SDV +I + Y+I GGKRLRP+L + +A L Y+G +H A IEFIHTAT Sbjct: 2 IHAXLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTAT 61 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 LLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ E S + L+ +S Sbjct: 62 LLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVN 121 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +++ V A+++YG Sbjct: 122 VIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYG 181 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Q G + + I Sbjct: 182 KYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIE 241 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + L + M + +L T +A KA L LP+S +K++L+ + + Sbjct: 242 KAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAVLPESEYKQALITLAHMAV 300 Query: 319 QR 320 R Sbjct: 301 NR 302 >gi|187930136|ref|YP_001900623.1| Polyprenyl synthetase [Ralstonia pickettii 12J] gi|187727026|gb|ACD28191.1| Polyprenyl synthetase [Ralstonia pickettii 12J] Length = 325 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 128/311 (41%), Positives = 193/311 (62%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM V+ +I +R+ S+V +I + +Y++ +GGKRLRP++ L A L Y+G++ LA Sbjct: 15 EDMRAVDAVIRRRLGSEVVLINQIGEYIVSAGGKRLRPVILLLVANALGYKGEHQHELAA 74 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 75 VVEFIHTATLLHDDVVDESDLRRGRKTANAVFGNAASVLVGDFLYSRAFQMMVQANSMRI 134 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++ + Sbjct: 135 MQILADATNIISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSDADAA 194 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ + Sbjct: 195 TEEAAAEYGRRIGTAFQIVDDLLDYTSTADQMGKNAGDDLREGKPTLPLIHLLSNGTEEQ 254 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + I G E+ F ++ + AL T A A+ + LP S ++++ Sbjct: 255 RALVRQAIEQG--GTEHFDAIFAAIQASGALEYTRQAAEREAAAAEAAANALPPSLFRQT 312 Query: 310 LMEVVDFCLQR 320 L+++ F LQR Sbjct: 313 LIDLCAFSLQR 323 >gi|189425336|ref|YP_001952513.1| polyprenyl synthetase [Geobacter lovleyi SZ] gi|189421595|gb|ACD95993.1| Polyprenyl synthetase [Geobacter lovleyi SZ] Length = 322 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 194/320 (60%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ +L +D+++V K + SDV +I V +Y++ SGGKR+RP + L A + EY+ Sbjct: 1 MQAALELIGEDLKQVEEQFRKDLESDVPLIRKVGEYVLASGGKRIRPAMLLLAARLCEYQ 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ + LA +EFIHTATLLHDDVVD + LRRG +A +WGN+ SVL+GDFL S++F + Sbjct: 61 GNQAIPLASVVEFIHTATLLHDDVVDSATLRRGLASANTLWGNEASVLIGDFLFSKSFSL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S + L +S +AEGE+ QL + +++TE+ Y+ V+++KTAVL SAA + Sbjct: 121 MVAAGSLDVLRVMSKATTVIAEGEVLQLLYTGEVELTEQQYIEVVRAKTAVLLSAACQCG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ GV QAL +GM LGIAFQL+DD+LDY E GK+IG D GK TLP+I Sbjct: 181 AILGGVSPEQEQALADFGMELGIAFQLMDDILDYTASEEEFGKSIGHDLEEGKLTLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + E+ + I +++ E+ + +++ + T +A L C Sbjct: 241 ALRGCSDEERGAVTAIIEKDELTPEDFRLVSDLVQSYGGIEYTVEKARDCVANCARHLSC 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P +S K +L+++ ++ + R Sbjct: 301 FPANSCKAALLDLAEYVVTR 320 >gi|197119777|ref|YP_002140204.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem] gi|197089137|gb|ACH40408.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem] Length = 322 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 126/312 (40%), Positives = 187/312 (59%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D++ V K + SDV +I V +Y++ SGGKR+RP L L A + Y G+ V LA Sbjct: 10 EDLKNVELQFKKDLQSDVPLIRKVGEYVLSSGGKRIRPGLVLLAARLCGYDGNRSVPLAS 69 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F +++ Sbjct: 70 VVEFIHTATLLHDDVVDNANLRRGLASANTLWGNEASVLVGDFLFSKSFSLMVTDGDLRI 129 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ +AEGE+ QL + +LD+T E Y+ V++SKTA+L SAA EV +++ Sbjct: 130 LKVLADATTIIAEGEVLQLVCTSDLDITVERYIEVVRSKTAILLSAACEVGAILGEADPV 189 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 RQAL YGM+LGIAFQL+DD LDY + GK+IG D GK TLP+I + T +E Sbjct: 190 HRQALADYGMDLGIAFQLMDDTLDYTASEEQFGKSIGHDLEEGKITLPLIHTLRNCTSQE 249 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 ++ S + +S E+ + +++ + T A Y K L P S+ + + Sbjct: 250 RDLIASVVEKELLSDEDFAQVLELVQRYGGIEHTVASAGEYVVLCKQHLEKFPPSATRDA 309 Query: 310 LMEVVDFCLQRL 321 L E+ ++ + R+ Sbjct: 310 LAELAEYVVTRV 321 >gi|73542643|ref|YP_297163.1| trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134] gi|72120056|gb|AAZ62319.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134] Length = 325 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 132/310 (42%), Positives = 190/310 (61%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L +A Y G+ H LA Sbjct: 16 DMRAVDAVIRQRLSSEVPLIEQIGEYIISAGGKRLRPVILLMSARAFGYDGNRHHELAAV 75 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S + Sbjct: 76 VEFIHTATLLHDDVVDESELRRGRETANAVFGNAASVLVGDFLYSRAFQMMVDAGSMRIM 135 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS +AEGE+ QL + DVT E YL VI+ KTA LF A+ ++ +++AG ++ Sbjct: 136 EILSNATNVIAEGEVLQLLNMHDPDVTIERYLQVIRYKTAKLFEASAQLGAVLAGADAAM 195 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++ + GT ++ Sbjct: 196 EEAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLLEYGTPEQR 255 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G E+ F + + AL T A + A+ + + P S WK +L Sbjct: 256 VLAREAIVQG--GTEHFDAVFSAIHASGALDVTFEAARREAEAAEKAAQQFPASDWKDTL 313 Query: 311 MEVVDFCLQR 320 + + +F LQR Sbjct: 314 IALCEFSLQR 323 >gi|148244492|ref|YP_001219186.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius okutanii HA] gi|146326319|dbj|BAF61462.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius okutanii HA] Length = 323 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 136/323 (42%), Positives = 196/323 (60%), Gaps = 5/323 (1%) Query: 1 MKMLED---LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 MK L D L D++K + +++ R+ S+V +I + Y+I +GGKRLRP+L L A Sbjct: 1 MKNLSDIQSLIKLDLKKTDEILINRLSSNVALINQMSHYIIHAGGKRLRPLLLLLCARAT 60 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 Y+G +H L+A IE IHTATLLHDD+VD+S+ RRGK VWGN S+LVGDFL S+A Sbjct: 61 GYQGTHHYLMAVVIELIHTATLLHDDIVDESSTRRGKDTVNEVWGNAPSILVGDFLYSRA 120 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 F +++E + LS +AEGE+ QL +N ++TE +Y VIK KTA LF AA Sbjct: 121 FEIMVEPNLMSIMCILSKTTNNIAEGEVLQLLNCQNDELTEVEYYAVIKQKTACLFQAAT 180 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ L++ V + ALK+YG++LG AFQ++DDVLDY + +GK +G+D GK TLP Sbjct: 181 QIGGLLSAVNKTQETALKNYGLHLGNAFQIIDDVLDYESDAKTIGKEVGDDLSEGKTTLP 240 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 +I A + +K K IN S + + I++ +A T +AY Q AK S Sbjct: 241 MIYALSHTSGNDKQLLKDAINQADNS--KIVQVIKILQSVKAFDYTRNQAYKSAQLAKQS 298 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L +P+S +K +L+ + D LQR Sbjct: 299 LNLIPNSEYKDALILLCDLSLQR 321 >gi|332994564|gb|AEF04619.1| Geranylgeranyl pyrophosphate synthase [Alteromonas sp. SN2] Length = 324 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 129/315 (40%), Positives = 192/315 (60%), Gaps = 2/315 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L+ DM+ VN LI +++ SDV +I + Y++ SGGKRLRP+LT+ +A + +H Sbjct: 9 LSNDDMQAVNHLIQQQVDSDVALINQLGFYIVNSGGKRLRPLLTVLSARAMGIENADHHT 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S +RRG+ A V+GNQ SVLVGDFL +++F M++ K Sbjct: 69 LAAIVEFIHTATLLHDDVVDESTMRRGRETANAVFGNQASVLVGDFLYTRSFQMMVSLKR 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ LS +AEGE+ QL + TE Y VI KTA LF AA ++++++ Sbjct: 129 MRVMDILSEATNQIAEGEVLQLMNCNDASTTEARYFDVIYGKTARLFEAATQLAAVLTDQ 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA-FQRG 245 +V A++ YG +LG AFQL DD+LDY + +EMGKN G+D GKPTLP++ A + Sbjct: 189 PENVEHAMQEYGKHLGTAFQLADDILDYMADSDEMGKNAGDDLAEGKPTLPLLYAMWNTD 248 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 ++ +K + I + +L + IM AL T A + + A DSL +PDS Sbjct: 249 SEEDKALIRDAIEQSN-GLPHLTRIQQIMESTGALDYTRTCANNEVKMAIDSLSIIPDSP 307 Query: 306 WKKSLMEVVDFCLQR 320 +K++L+ + ++R Sbjct: 308 YKEALIALAHISVER 322 >gi|253995893|ref|YP_003047957.1| trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8] gi|253982572|gb|ACT47430.1| Trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8] Length = 322 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 124/310 (40%), Positives = 188/310 (60%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM V+ I + + S+V ++ V +Y+I SGGKRLRPML L A + H LA Sbjct: 13 DMRMVDTTIRQSLHSEVALVNQVAEYIINSGGKRLRPMLVLLAAGLFGEIQTQHHQLAAV 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S+ RRG+ A ++GN SVLVGDF+ S+AF M++ ++ + Sbjct: 73 VEFIHTATLLHDDVVDESSKRRGQSTANALFGNAASVLVGDFVYSRAFQMMVAVQNMRVM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS +AEGE+ QL N D++++ YL VI KTA LF AA + ++I+ Sbjct: 133 EVLSNATNVIAEGEVLQLLNVNNADISDKAYLQVIHYKTAKLFEAATRLGAIISEASAKD 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL +YGM+LG AFQL+DD+LD G ++GKN+G+D GKPTLP++ A + + Sbjct: 193 EAALTAYGMHLGTAFQLIDDILDLSGNSEDIGKNLGDDLAEGKPTLPLLYAMRNSNTEQS 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 ++ I G +E+L + I+ + AL + A + + + ++ P+S +K++L Sbjct: 253 QLIRNAIEQG--GLEHLTQVVEIVNNSGALDHVKKIAEAESAQCRAAIAHFPESKFKQAL 310 Query: 311 MEVVDFCLQR 320 +E+ DF + R Sbjct: 311 IELADFAVTR 320 >gi|239947339|ref|ZP_04699092.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921615|gb|EER21639.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes scapularis] Length = 326 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 119/250 (47%), Positives = 176/250 (70%), Gaps = 2/250 (0%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+GDNH+ LA Sbjct: 11 LDEVTKLNDLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGDNHIKLA 70 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F ++I + S + Sbjct: 71 SAVEFIHTATLLHDDVVDDSTLRRFKPTANIIWGSKTSILVGDFLFSQSFKLMIASGSIK 130 Query: 129 ALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A+ L+ + ++EGE+ QL L++ +T E+Y ++KSKTA LF A+ EV ++IA Sbjct: 131 AMNVLAKASAIISEGEVVQLVKLNERRIITIEEYQQIVKSKTAELFGASCEVGAIIAEQL 190 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + V + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I + + + Sbjct: 191 DHVSKDMQDFGKLLGTIFQVIDDLLDYWGNDKQVGKNIGDDFLEGKVTLPLIFLYNK-LE 249 Query: 248 REKNFWKSTI 257 ++ W I Sbjct: 250 QDTQLWLENI 259 >gi|183600352|ref|ZP_02961845.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827] gi|188020143|gb|EDU58183.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827] Length = 323 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 133/315 (42%), Positives = 188/315 (59%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT +DM VN IL ++ SDV +I + Y++ GGKR+RPM+ + L Y G H+ Sbjct: 8 ELTSEDMSAVNEAILSQLNSDVALINQLGYYIVSGGGKRIRPMIAVLAGRSLGYSGQKHI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M+ + Sbjct: 68 QVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQMMTDLD 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L+ +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA S+++A Sbjct: 128 SMRVLKLMSEATNVIAEGEVLQLMNCNDPNITEENYMQVIYSKTARLFEAAAHASAILAS 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 +AL+ YG LG AFQL+DD+LDY + ++GKN G+D GKPTLP++ A G Sbjct: 188 ATPEQEKALQDYGRYLGTAFQLIDDLLDYDADNKQLGKNTGDDLDEGKPTLPLLHAMNHG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T+ E + I G L M+ +L T RA QKA D+L L DS Sbjct: 248 TEEEAALIRQAIEQGN-GRHLLDTVLATMKRCGSLEYTYARAKEESQKAIDALSTLDDSV 306 Query: 306 WKKSLMEVVDFCLQR 320 +K +L+ + + + R Sbjct: 307 YKDALISLAEVAISR 321 >gi|241068508|ref|XP_002408454.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase, putative [Ixodes scapularis] gi|215492442|gb|EEC02083.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase, putative [Ixodes scapularis] Length = 345 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 123/264 (46%), Positives = 180/264 (68%), Gaps = 8/264 (3%) Query: 1 MKMLEDLTLKDMEK------VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54 +K LE +T D K +N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA Sbjct: 65 IKHLEKVTTADQAKYKELIILNDLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITA 124 Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 M +Y+GDNH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL Sbjct: 125 KMFDYKGDNHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANIIWGSKTSILVGDFLF 184 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLF 173 SQ+F ++I + S +A+ L+ + ++EGE+ QL L++ +T E+Y ++KSKTA LF Sbjct: 185 SQSFKLMIASGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIEEYQQIVKSKTAELF 244 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 A+ EV ++IA + V + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK Sbjct: 245 GASCEVGAIIAEQLDHVSKDMQDFGKLLGTIFQVIDDLLDYWGNDKQVGKNIGDDFLEGK 304 Query: 234 PTLPVILAFQRGTKREKNFWKSTI 257 TLP+I + + +++ W I Sbjct: 305 VTLPLIFLYNK-LEQDTQLWLENI 327 >gi|261854792|ref|YP_003262075.1| trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2] gi|261835261|gb|ACX95028.1| Trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2] Length = 325 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 122/305 (40%), Positives = 185/305 (60%), Gaps = 2/305 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + +L DM +VN +I ++ SDV +I + +Y+I +GGKR RPM+ + A L Sbjct: 9 IRELAAPDMARVNTVIQAKLASDVALINQLSQYIIGAGGKRFRPMVLMLAAQALGGTSPW 68 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A +E IHTATLLHDDVVD+S LRRG+ A ++GN SVL GDFL S+AF M++E Sbjct: 69 AAQMAAVVELIHTATLLHDDVVDESTLRRGRDTANALFGNAASVLTGDFLYSRAFEMMVE 128 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + + L+ +AEGE+ QL + DV+E+ Y+ VI KTA LF+AA ++++++ Sbjct: 129 VQEPRVMAILAQATNRIAEGEVLQLMNMGDADVSEDRYVDVIVRKTATLFAAATQLAAVL 188 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G V AL +YG++LG AFQL+DDVLDY G+ GK++G+D GKPTLP+I+A Q Sbjct: 189 EGQPEEVEAALTAYGLHLGTAFQLIDDVLDYTGDEAHTGKHVGDDLAEGKPTLPLIIAMQ 248 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG + + I + +++ + AL T +RA + +AK ++ +PD Sbjct: 249 RGDEATVAMIRRAITEQ--DARDIEAICSAIEHTGALAYTAHRAQAEADRAKQAIAAVPD 306 Query: 304 SSWKK 308 S +K+ Sbjct: 307 SPFKE 311 >gi|73666686|ref|YP_302702.1| trans-hexaprenyltrans transferase [Ehrlichia canis str. Jake] gi|72393827|gb|AAZ68104.1| Trans-hexaprenyltrans transferase [Ehrlichia canis str. Jake] Length = 325 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 129/318 (40%), Positives = 199/318 (62%), Gaps = 7/318 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L+ L +D++ + LI + + +I +++ +LI SGGKR+RP++ ML +N Sbjct: 12 LKSLIQQDLDAMEILISQHSDKHIALITEIIHHLIKSGGKRIRPIIFFIICKMLNCTNEN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +L+A AIEFIH ATLLHDDV+D+S LRRGK + +WGN+ S+LVGDFLL+ +F +IE Sbjct: 72 KILIAAAIEFIHNATLLHDDVIDESDLRRGKKTSNFIWGNKASILVGDFLLAISFQWLIE 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ L LS + T+ GE++Q+ S N+++++E Y+ +I +KTA LF A E ++ + Sbjct: 132 CKNLNILSILSQTSNTIVVGEIQQMLSSHNINISKEKYIEIISAKTASLFGATCESAAHL 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A V +ALKS+G N GIAFQ++DD+LDY + GK +G D GK TLPVI+A+Q Sbjct: 192 AQVNLQESKALKSFGNNFGIAFQIMDDILDYTASNAQFGKKLGNDLSTGKTTLPVIIAYQ 251 Query: 244 RGTKREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 T EK FW +ISV +NL++A ++ + A+ + A +Y +AK L Sbjct: 252 NATPEEKKFWD------QISVNQNLEQAISYIKSHNAIEKSLEIATAYIDQAKACLTIFS 305 Query: 303 DSSWKKSLMEVVDFCLQR 320 +S++K L +++D L R Sbjct: 306 ESNYKMCLNKLLDCILYR 323 >gi|84622979|ref|YP_450351.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|122879101|ref|YP_200077.6| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] gi|188577962|ref|YP_001914891.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|84366919|dbj|BAE68077.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522414|gb|ACD60359.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 332 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 126/322 (39%), Positives = 179/322 (55%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ +I +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDAVIRRRLASDVMLINQIADHIISAGGKRLRPMLVILAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E E+GKN+G+D GK TLP+I Sbjct: 193 ALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAAELGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + L + RA Y A+ +L Sbjct: 253 AMAHSDATTRERLRQIVEQGDAAA--MPDVLAAIHATGGLDYSRQRAGEYAAAAEQALDT 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 311 LPYSPAVAALRGLARYAVERTH 332 >gi|304321515|ref|YP_003855158.1| polyprenyl synthetase family protein [Parvularcula bermudensis HTCC2503] gi|303300417|gb|ADM10016.1| polyprenyl synthetase family protein [Parvularcula bermudensis HTCC2503] Length = 317 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 137/300 (45%), Positives = 191/300 (63%), Gaps = 1/300 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +E N +IL + S V +IP+V ++LI +GGKRLRP++TLA A + G+ LLA A+ Sbjct: 6 LESTNQVILDHLASSVPLIPEVARHLIAAGGKRLRPLMTLAAAELCGETGEGPRLLAGAV 65 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IH ATLLHDDVVD+SALRRG A +V+GN+ SVLVGDFL ++AF +++ T S E L Sbjct: 66 ELIHAATLLHDDVVDESALRRGLRTANIVFGNKESVLVGDFLFARAFELMVRTGSIEVLG 125 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS +C +AEGE+ QL+ S+NL+ + YL VI +KTA LF+AA E +++AG Sbjct: 126 ILSKASCIIAEGEVLQLTTSQNLETPQTIYLDVISAKTAALFAAAAEAGAVVAGGDAEKV 185 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK-REK 250 A+++YG+N GIA+QLVDD LDY+ +GK G+DFR GK TLPVI A+ T E+ Sbjct: 186 AAMRAYGLNFGIAYQLVDDALDYQSSGAVLGKTAGDDFREGKMTLPVIRAYAASTSDEER 245 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FW+ TI D ++ +A +MR +R + A Y + A SL P + +L Sbjct: 246 QFWQRTIRDKDQRPDDFARANELMRRDRIVEACLQEARGYAEAAASSLAVFPVGDLRGTL 305 >gi|166711277|ref|ZP_02242484.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 332 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 126/322 (39%), Positives = 179/322 (55%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E E+GK++G+D GK TLP+I Sbjct: 193 ALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAAELGKSLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + L + RA Y A+ +L Sbjct: 253 AMAHSDATTRERLRQIVEQGDAAA--MPDVLAAIHATGGLDYSRQRAGEYAAAAEQALET 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 311 LPYSPAVAALRGLARYAVERTH 332 >gi|34581601|ref|ZP_00143081.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246] gi|28262986|gb|EAA26490.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246] Length = 327 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 119/258 (46%), Positives = 180/258 (69%), Gaps = 3/258 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K+ +DL ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+ Sbjct: 5 VKIQQDLK-DEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYK 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F + Sbjct: 64 GDNHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + S +A+ L+ + ++EGE+ QL L++ +T ++Y ++KSKTA LF A V Sbjct: 124 MVASGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGTACAV 183 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++IAG + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I Sbjct: 184 GAIIAGQVDHISKDMQDFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLI 243 Query: 240 LAFQRGTKREKNFWKSTI 257 + + ++K W I Sbjct: 244 FLYNK-LAQDKQLWLENI 260 >gi|293390542|ref|ZP_06634876.1| heptaprenyl diphosphate synthase component II [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951076|gb|EFE01195.1| heptaprenyl diphosphate synthase component II [Aggregatibacter actinomycetemcomitans D7S-1] Length = 329 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 128/320 (40%), Positives = 198/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L+ +DM+K+N IL ++ SDV +I + Y++ GGKR+RP++ + A L + Sbjct: 9 VKAIQALSHEDMQKINESILAQLNSDVALINQLGFYIVQGGGKRIRPLIAVLAARALGFD 68 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 69 GQQAITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + +S + L ++ LAEGE++QL + +EE+Y+ VI SKTA LF A + + Sbjct: 129 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMRVIYSKTARLFEVAAQAA 188 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IAG ++ +AL++YG LG AFQLVDDVLDY N +GKN+G+D GKPTLP++ Sbjct: 189 AIIAGADDTQEKALQNYGRYLGTAFQLVDDVLDYSANANALGKNVGDDLAEGKPTLPLLH 248 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G ++ + I G + + IM E+ +L RA QKA D+++C Sbjct: 249 AMHHGNAQQAALIRKAIEQGG-RRDAIDDVLAIMAEHNSLDYAMNRAKQEAQKAVDAIQC 307 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K +L+ + + R Sbjct: 308 LPESEYKLALISLAYLSVDR 327 >gi|268592839|ref|ZP_06127060.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131] gi|291311626|gb|EFE52079.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131] Length = 323 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 132/315 (41%), Positives = 187/315 (59%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +LT +DM VN IL ++ SDV +I + Y++ GGKR+RPM+ + L Y G H Sbjct: 8 ELTTEDMSAVNEAILSQLNSDVALINQLGYYIVSGGGKRIRPMIAVLAGRSLGYSGHKHT 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M+ + Sbjct: 68 QVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQMMTDLD 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S L+ +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA S+++A Sbjct: 128 SMRVLKLMSEATNVIAEGEVLQLMNCNDPNITEENYMQVIYSKTARLFEAAAHASAILAN 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 +AL+ YG +G AFQL+DD+LDY + ++GKN G+D GKPTLP++ A Q G Sbjct: 188 ATPEQEKALQDYGRYIGTAFQLIDDLLDYDADNAQLGKNTGDDLDEGKPTLPLLHAMQNG 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + E + I G L M+ +L T RA QKA D+L + DS Sbjct: 248 NEEESALIRQAIEQGN-GRHLLDTVLATMKRCGSLEYTYARAQEEAQKAIDALNIIEDSI 306 Query: 306 WKKSLMEVVDFCLQR 320 +K +L+ + +QR Sbjct: 307 YKDALIGLAYIAIQR 321 >gi|152998234|ref|YP_001343069.1| polyprenyl synthetase [Marinomonas sp. MWYL1] gi|150839158|gb|ABR73134.1| Polyprenyl synthetase [Marinomonas sp. MWYL1] Length = 326 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 128/323 (39%), Positives = 195/323 (60%), Gaps = 6/323 (1%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALMLEY 59 + D+ + +VN I+ ++ SD+ +I + Y+I +GGKRLRP+L L A+A + + Sbjct: 6 IHDVVANEFGQVNDYIVSQLSSDIPLIEQIGYYIISNGGKRLRPLLVLLAAKASAELDKP 65 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 + D + +A IEFIHT+TLLHDDVVD+S +RRGK A WGN SVLVGDFL S+AF Sbjct: 66 KLDQAIQMATIIEFIHTSTLLHDDVVDESDMRRGKKTANEEWGNAPSVLVGDFLYSRAFQ 125 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++++ S + + L+ +AEGE++QL + D TEE YL VI+ KTA LF A Sbjct: 126 IMVDVGSMQCMSVLAKTTNIIAEGEVQQLINCGDPDTTEESYLKVIQYKTAKLFEGAALC 185 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++IAG ++AL+ +GM +G AFQL+DDV+DY EMGK++G+D GKPTLP+I Sbjct: 186 GAVIAGASKEHQEALRQFGMYVGTAFQLIDDVMDYTSTAEEMGKSVGDDLAEGKPTLPLI 245 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + G K + I G ++ LK ++ A+ T+ +A A +S+ Sbjct: 246 FTMKHGPKDAVERVRQAILTG--GLDQLKSIINDVQNCGAIEYTQQKAQEQADLAIESIA 303 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 LP+S +KK+L+ + + ++R N Sbjct: 304 PLPESDYKKALVALANASVKRRN 326 >gi|298369461|ref|ZP_06980778.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str. F0314] gi|298282018|gb|EFI23506.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str. F0314] Length = 324 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 128/332 (38%), Positives = 203/332 (61%), Gaps = 20/332 (6%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D++KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFKQHLHEDLDKVNVVINQAVKSDVALISQIGTYIISAGGKRLRPIITILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRETANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S + LE ++ +AEGE+ QL N D+TE+ Y+ VI+ KTA LF AA Sbjct: 121 AFQLMVASGSMKILEVMADATNIIAEGEVMQLMNIGNTDITEKQYIQVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++ G + QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTL Sbjct: 181 AQVGAILGGANPAQEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG----- 291 P+I G+++ D ++++EN +++ + + +V++ Y+ Sbjct: 241 PLIYLMHNGSEQ-------AAKDVRLALENADRSY-FEKIHDYVVNSNALPYAINEARKA 292 Query: 292 -QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +KA L LPD+ ++ ++ + L R++ Sbjct: 293 VEKAVACLDILPDNEITLAMRQLAEESLARVS 324 >gi|207744381|ref|YP_002260773.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum IPO1609] gi|206595786|emb|CAQ62713.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum IPO1609] Length = 338 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 120/271 (44%), Positives = 173/271 (63%), Gaps = 2/271 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG++H LA Sbjct: 42 EDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGNHHYELAA 101 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTA LLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 102 VVEFIHTAALLHDDVVDESELRRGRQTANAVFGNAASVLVGDFLYSRAFQMMVQADSMRV 161 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G + Sbjct: 162 MQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAA 221 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ + Sbjct: 222 TEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIHLLSHGTEEQ 281 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRAL 280 + + I G E+ F ++ + AL Sbjct: 282 RALARQAIEQG--GTEHFDAIFDAIQASGAL 310 >gi|222834545|gb|EEE73022.1| predicted protein [Populus trichocarpa] Length = 309 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 131/309 (42%), Positives = 189/309 (61%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L +A +Y G H LA + Sbjct: 1 MRAVDAVIRRRLSSEVPLIEQIGEYIIGAGGKRLRPVILLLSARAFDYEGHRHHELAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M++E S +E Sbjct: 61 EFIHTATLLHDDVVDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMVEAGSMRIME 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS +AEGE+ QL + +VT E YL VI+ KTA LF A+ ++ +++AG + Sbjct: 121 ILSNATNVIAEGEVLQLLNMHDPEVTVERYLQVIRYKTAKLFEASAQLGAVLAGADAEME 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++ + GT +++ Sbjct: 181 EAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLLEHGTAQQRE 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G E+ F + + AL T A + A+ + PDS K++L+ Sbjct: 241 LARDAIVQG--GTEHFDAVFSAIHASGALDVTFAAAQREAEAAEKAAMQFPDSPLKQTLI 298 Query: 312 EVVDFCLQR 320 ++ F LQR Sbjct: 299 DLCAFSLQR 307 >gi|269958400|ref|YP_003328187.1| octaprenyl-diphosphate synthase [Anaplasma centrale str. Israel] gi|269848229|gb|ACZ48873.1| octaprenyl-diphosphate synthase [Anaplasma centrale str. Israel] Length = 327 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 127/317 (40%), Positives = 189/317 (59%), Gaps = 3/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L++L +D+E++ LI+ SD+ I D++ +L+ SGGKR+RP++ LA ML + + Sbjct: 12 LKNLVSEDLEEMERLIVTTSNSDISYITDIINHLMLSGGKRIRPIMLLAVCKMLALQDER 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +L+A AIEFIH+ATLLHDDVVD S RRG + +WGN+ SVLVGDFLL+ AF ++ Sbjct: 72 RILIAAAIEFIHSATLLHDDVVDQSESRRGTKTSNSLWGNKASVLVGDFLLATAFQWLVS 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E L LS +CT+ GE++Q+ SK+LD+T E YL +I +KTA LFSA E + ++ Sbjct: 132 CSNFELLTTLSRASCTIVTGEIQQMVYSKSLDITREKYLEIISAKTAALFSATCESAGVL 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + R+ALK++G N GI FQ+VDD+LDY + + GK G+D NG+ TLP+I+A++ Sbjct: 192 SESSFDDRKALKNFGHNFGITFQIVDDLLDYTAQHEKWGKTPGQDLSNGQVTLPMIMAYE 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 K + + V ++ I N A + A Y + L PD Sbjct: 252 EADYAGKEMLRGALAGRPSDVASVHS--YISSLNVAQKAIAFAA-EYVDASHKFLEPFPD 308 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K L ++ LQR Sbjct: 309 SQYKSKLSALLRSALQR 325 >gi|315634742|ref|ZP_07890026.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393] gi|315476690|gb|EFU67438.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393] Length = 329 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 128/320 (40%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M ++ L+ DM+KVN IL ++ SDV +I + Y++ GGKR+RP++T+ A L + Sbjct: 9 MNAIQALSQADMQKVNESILAQLNSDVVLINQLGFYIVQGGGKRIRPLITVLAARALGFE 68 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 69 GQKAITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + +S + L ++ LAEGE++QL + +EE+Y+ VI SKTA LF A + + Sbjct: 129 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMRVIYSKTARLFEVAAQAA 188 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IA + +AL++YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ Sbjct: 189 AIIADADDEQEKALQNYGRYLGTAFQLVDDVLDYSANAKALGKNVGDDLAEGKPTLPLLH 248 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G +++ + I G E + + IM E+++L RA QKA D+++ Sbjct: 249 AMHHGNEQQAALIREAIEQGG-KREAIDEVLAIMAEHKSLDYAMDRAKQEAQKAVDAIQI 307 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 308 LPESEYKQALISLAYLSVDR 327 >gi|253702068|ref|YP_003023257.1| trans-hexaprenyltranstransferase [Geobacter sp. M21] gi|251776918|gb|ACT19499.1| Trans-hexaprenyltranstransferase [Geobacter sp. M21] Length = 322 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 124/312 (39%), Positives = 189/312 (60%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D++ V K + SDV +I V +Y++ SGGKR+RP L L + + Y G+ V LA Sbjct: 10 EDLKNVELQFKKDLQSDVPLIRKVGEYVLSSGGKRIRPALVLLASRLCGYDGNRSVPLAS 69 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F +++ Sbjct: 70 VVEFIHTATLLHDDVVDNANLRRGLASANTLWGNEASVLVGDFLFSKSFSLMVTDGDLRI 129 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ +AEGE+ QL + +LD+T E Y+ V++SKTA+L SAA EV +++ Sbjct: 130 LKVLADATTIIAEGEVLQLVCTCDLDITVERYIEVVRSKTAILLSAACEVGAILGEADPE 189 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 RQAL YGM+LGIAFQL+DD LDY + GK+IG D GK TLP+I + T++E Sbjct: 190 HRQALADYGMDLGIAFQLMDDTLDYTASEEQFGKSIGHDLEEGKITLPLIHTLRNCTEQE 249 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 ++ S + +S E+ + +++ + T A + K L P S+ +++ Sbjct: 250 RDLIASVVEKELLSDEDFAQVLELVQRYGGIEHTVASAAEHVVLCKRHLEKFPPSATREA 309 Query: 310 LMEVVDFCLQRL 321 L E+ ++ + R+ Sbjct: 310 LAELAEYVVTRV 321 >gi|58425655|gb|AAW74692.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 408 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 126/322 (39%), Positives = 179/322 (55%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ +I +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 89 LPQIQSLAAPDMAAVDAVIRRRLASDVMLINQIADHIISAGGKRLRPMLVILAGHAAGGS 148 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 149 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 208 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 209 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 268 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E E+GKN+G+D GK TLP+I Sbjct: 269 ALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAAELGKNLGDDLAEGKATLPLIH 328 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + L + RA Y A+ +L Sbjct: 329 AMAHSDATTRERLRQIVEQGDAAA--MPDVLAAIHATGGLDYSRQRAGEYAAAAEQALDT 386 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 387 LPYSPAVAALRGLARYAVERTH 408 >gi|254284097|ref|ZP_04959065.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B] gi|219680300|gb|EED36649.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B] Length = 321 Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 122/311 (39%), Positives = 196/311 (63%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++E+V+ LI++++ SDV+M+ +V +Y++ +GGKRLRP+L L L ++H+ + Sbjct: 11 SEVEQVDQLIIEQLHSDVDMVENVGQYIVDAGGKRLRPLLVLLAGEALGGCTESHIRFSA 70 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD S LRRG+ A +GN SVLVGDFL ++AF ++++ + + Sbjct: 71 VVEFIHTATLLHDDVVDVSTLRRGRPTANEAFGNAPSVLVGDFLYTRAFQLMVQLDNMDL 130 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L ++ T+AEGE+ QL+ + N D+ E Y+ VI KTA+LF++A + ++++A Sbjct: 131 LRHMADTTNTIAEGEVLQLARAGNPDIDESQYIDVITRKTAILFASACQGAAMLANCDIK 190 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +QAL YG+NLGIAFQ++DDVLDY G+ GKNIG+D GK TLP++ Q G+K + Sbjct: 191 TQQALSQYGLNLGIAFQMIDDVLDYEGDPTVTGKNIGDDLNEGKTTLPLLHTMQTGSKPD 250 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 ++ ++ + S +L + +R + +L T RA A L L ++ K + Sbjct: 251 RDLVAQSLREK--STASLSEVIAAVRRSGSLDFTRERARERHDLAMSGLDVLQENRAKAA 308 Query: 310 LMEVVDFCLQR 320 L +++ L+R Sbjct: 309 LSDLLHLSLER 319 >gi|91205532|ref|YP_537887.1| octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C] gi|91069076|gb|ABE04798.1| Octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C] Length = 334 Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 129/322 (40%), Positives = 204/322 (63%), Gaps = 3/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K+ +DL ++ ++N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y Sbjct: 12 VKIQQDLK-DEVAQLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYN 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F + Sbjct: 71 GDSHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + S +A+ L+ + ++EGE+ QL L++ + E+Y ++KSKTA LF A+ V Sbjct: 131 MVASGSIKAMNVLAKASAIISEGEVVQLVKLNERRLINIEEYQQIVKSKTAELFGASCSV 190 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I Sbjct: 191 GAIIANQSDDISKNMEEFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLI 250 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + + K +K K+ I + E + +M +++ D S +A L Sbjct: 251 FLYDKLEKDDKAHLKNMIKSDNRTKEEFVQICDLMVKHKISKDIINHLNSLENEAISLLN 310 Query: 300 CLP-DSSWKKSLMEVVDFCLQR 320 +P + +K+ L ++ F L R Sbjct: 311 KIPVQNIYKEYLFSIIRFILDR 332 >gi|222054630|ref|YP_002536992.1| Polyprenyl synthetase [Geobacter sp. FRC-32] gi|221563919|gb|ACM19891.1| Polyprenyl synthetase [Geobacter sp. FRC-32] Length = 322 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 124/312 (39%), Positives = 189/312 (60%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D+ V K + SDV +I V +Y++ SGGKR+RP L L +A + Y G+ +V LA Sbjct: 10 EDLTNVELQFKKDLHSDVPLIRKVGEYVLASGGKRIRPALLLLSAKLCGYTGNRNVALAS 69 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F +++ + Sbjct: 70 VIEFIHTATLLHDDVVDNANLRRGIASANTLWGNEASVLVGDFLFSKSFSLMVADGDLKI 129 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ LS +AEGE+ QL + +LD+T E Y+ V+K+KTA+L SAA + +++ + Sbjct: 130 LKVLSGATTIIAEGEVLQLICTSDLDLTLERYIEVVKAKTAILLSAACQSGAILGQASSQ 189 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL+ +GM+LGIAFQL+DD LDY + GK+IG D GK TLP+I ++ T E Sbjct: 190 HETALQEFGMDLGIAFQLMDDTLDYVASEEQFGKSIGHDLEEGKITLPLIHTLRQCTAEE 249 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 ++ + I + ++ F ++ + + T A Y + K L P+S+ K + Sbjct: 250 RSQIGTIIEKDILEDQDFSTVFDLVGKYDGIKHTIAVANEYVNRCKGHLNVFPESTEKAA 309 Query: 310 LMEVVDFCLQRL 321 L ++ D+ L R+ Sbjct: 310 LFDLADYVLTRV 321 >gi|291612793|ref|YP_003522950.1| trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1] gi|291582905|gb|ADE10563.1| Trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1] Length = 320 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 127/320 (39%), Positives = 188/320 (58%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ L+ L DM V+ +I R+ S+V ++ V +Y+I SGGKRLRP L L +A Y Sbjct: 1 MENLKRLLASDMAAVDAVIRARLHSEVALVNQVGEYIINSGGKRLRPALVLLSAQAFGYG 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M Sbjct: 61 GKHHHDLAAVVEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDFLYSRSFQM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ ++ L+ +AEGE+ QL + V +Y+ VI KTA LF AA+ + Sbjct: 121 MVDVGEMRVMQTLADATNVIAEGEVLQLLNCHDASVDIPNYMRVIHCKTAKLFEAAMRLG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + +A YGM+LG AFQL+DDVLDY + + GK++G+D GKPTLP+I Sbjct: 181 AILGKASTADEEAAAKYGMHLGTAFQLIDDVLDYSADEAQTGKHLGDDLAEGKPTLPLIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q GT + + I G + + ++R+ AL T +A + A ++ Sbjct: 241 AMQHGTGAQAAVVRDAIEQGDVG--KFTEVLTVIRDTGALEFTRQQALRETETACAAIAA 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 + DS +K+ L+E+ F R Sbjct: 299 MADSKYKQCLLELAHFAATR 318 >gi|254230032|ref|ZP_04923431.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] gi|151937420|gb|EDN56279.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] Length = 287 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 118/285 (41%), Positives = 176/285 (61%), Gaps = 1/285 (0%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GGKRLRP+L + +A L Y+G+ H + A IEFIHTATLLHDDVVD+S +RRGK Sbjct: 2 YIVSGGGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKA 61 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A +GN SVLVGDF+ +++F M+ E S + L+ +S +AEGE++QL + D Sbjct: 62 TANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSNAVNVIAEGEVQQLMNCNDPD 121 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 TEE Y+ VI SKTA LF +A ++ +++ V A+++YG LG AFQL+DDV+DY Sbjct: 122 TTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVMDYT 181 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 + +MGKN+G+D GKPTLP++ A + T + I ++ L+ +M+ Sbjct: 182 SDGEDMGKNVGDDLAEGKPTLPLLHAMRNTTPDNALMIREAIEKAN-GMDRLEDILAVMK 240 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E +L T +A KA + L LP+S +K++L+ + +QR Sbjct: 241 EAGSLEYTTQKALEEADKAIEELSVLPESEYKQALITLAHVAVQR 285 >gi|157825829|ref|YP_001493549.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford] gi|157799787|gb|ABV75041.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford] Length = 327 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 119/258 (46%), Positives = 181/258 (70%), Gaps = 3/258 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K+ +DL ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+ Sbjct: 5 VKIQQDLK-DEVTKLNDLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYK 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F + Sbjct: 64 GDNHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + S +A+ L+ + ++ GE+ QL L++ +T E+Y ++KSKTA LF A+ EV Sbjct: 124 MVASGSIKAMNVLAKASAIISVGEVIQLVKLNERRIITIEEYYQIVKSKTAELFGASCEV 183 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I Sbjct: 184 GAIIAEQVDHISKDIRYFGTLLGTIFQVIDDLLDYLGNDQQVGKNIGDDFLEGKVTLPLI 243 Query: 240 LAFQRGTKREKNFWKSTI 257 + + +++K W I Sbjct: 244 FLYNK-LEQDKRLWLENI 260 >gi|229586816|ref|YP_002845317.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5] gi|228021866|gb|ACP53574.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5] Length = 371 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/316 (41%), Positives = 203/316 (64%), Gaps = 5/316 (1%) Query: 9 LKD-MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 LKD + K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+GDNH+ L Sbjct: 55 LKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGDNHIKL 114 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F +++ + S Sbjct: 115 ASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMVASGSI 174 Query: 128 EALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +A+ L+ + ++EGE+ QL L++ +T ++Y ++KSKTA LF A V ++IA Sbjct: 175 KAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGTACAVGAIIAEQ 234 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I + + Sbjct: 235 VDHISKDMQDFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLIFLYNK-L 293 Query: 247 KREKNFW-KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DS 304 ++K W ++ I K + ++ K +M ++ +T + A L +P + Sbjct: 294 AQDKQLWLENIIKCDKRTKDDFVKIHDLMVKHEIYNETVNYLSNLENAASKLLNKIPVQN 353 Query: 305 SWKKSLMEVVDFCLQR 320 +K L ++ F L+R Sbjct: 354 IYKDYLFSIIKFILER 369 >gi|332140074|ref|YP_004425812.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|332143128|ref|YP_004428866.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327550096|gb|AEA96814.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327553150|gb|AEA99868.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] Length = 324 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 129/315 (40%), Positives = 188/315 (59%), Gaps = 2/315 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L+ DM+ VN LI +++ S+V +I + Y++ SGGKRLRP+LT+ +A + + H Sbjct: 9 LSNDDMQAVNQLIQQQVDSEVALINQLGFYIVNSGGKRLRPLLTVLSARAMGIDNNEHHT 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S +RRG+ A ++GNQ SVLVGDFL +++F M++ K Sbjct: 69 LAAIVEFIHTATLLHDDVVDESTMRRGRETANAIFGNQASVLVGDFLYTRSFQMMVSLKR 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E LS +AEGE+ QL + TE Y VI KTA LF AA ++++++ Sbjct: 129 MRVMEILSEATNQIAEGEVLQLMNCNDAGTTEARYFDVIYGKTARLFEAATQLAAVLTEQ 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +A++ YG +LG AFQL DD+LDY + EMGKN G+D GKPTLP++ A T Sbjct: 189 NEHIERAMQEYGKHLGTAFQLADDILDYMADSEEMGKNAGDDLAEGKPTLPLLYAMWHAT 248 Query: 247 K-REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 +K + I + +L + IM E AL T A Q A DSL + DS Sbjct: 249 NDSDKALIQEAIEQSN-GLPHLTRIQGIMEETGALDYTRQCAQKEVQMAIDSLSAIEDSK 307 Query: 306 WKKSLMEVVDFCLQR 320 +K++L+ + ++R Sbjct: 308 YKEALIALAHISIER 322 >gi|269468820|gb|EEZ80424.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster bacterium] Length = 323 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 132/317 (41%), Positives = 195/317 (61%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L D++K + +++KR+ S+V +I + Y+I +GGKRLRP+L L A Y+G++ Sbjct: 7 IQKLLKSDLKKTDKVLIKRLSSNVALINQMSSYIINAGGKRLRPLLLLLCAKATGYQGNH 66 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H L+A IE IHTATLLHDD+VD+SA RRGK A VWGN SVLVGDFL S+AF M++E Sbjct: 67 HHLMAVVIELIHTATLLHDDIVDESATRRGKDTANEVWGNAASVLVGDFLYSRAFEMMVE 126 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S ++ LS ++AEGE+ QL +N +++E +Y +VI+ KTA LF A+ ++ ++ Sbjct: 127 PDSMRIMKILSKTTNSIAEGEVLQLLNCQNSELSEAEYFNVIERKTACLFQASTQIGGIL 186 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + AL++YG++LG AFQ++DD LDY + MGK +G+D GK TLP+I A Sbjct: 187 SNADEKQELALRNYGLHLGNAFQIIDDALDYESDAQTMGKEVGDDLAEGKTTLPMICALS 246 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 R +E K+ IN+ S + K I+ A T +A AK SL L + Sbjct: 247 RTLGQEHELLKNAINNADNS--KIDKIIKILDSVNAFEYTHNKAQESADLAKKSLAILEE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K +L+ + D LQR Sbjct: 305 SDYKNALVLLCDLSLQR 321 >gi|297537721|ref|YP_003673490.1| trans-hexaprenyltranstransferase [Methylotenera sp. 301] gi|297257068|gb|ADI28913.1| Trans-hexaprenyltranstransferase [Methylotenera sp. 301] Length = 332 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 126/310 (40%), Positives = 182/310 (58%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ VN +I + S+V ++ V Y++ SGGKRLRP+L L + + H LA Sbjct: 23 DILAVNTVITHSLHSEVTLVNQVAHYIVNSGGKRLRPILVLLSGGLFGEVKPEHHQLAAV 82 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S+ RRG+ A ++GN SVLVGDF+ S+AF M++ ++ + Sbjct: 83 VEFIHTATLLHDDVVDESSKRRGQNTANAIFGNAASVLVGDFVYSRAFQMMVAVQNMRVM 142 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS +AEGE+ QL N DVT+ YL VI KTA LF AA + ++I+ S Sbjct: 143 EVLSNATNVIAEGEVLQLLNIHNADVTDGAYLQVIHYKTAKLFEAATRLGAIISNASPSD 202 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL YGM++G AFQL+DDVLD G +E+GKN+G+D GKPTLP++ A + GT E Sbjct: 203 EEALSQYGMHIGTAFQLIDDVLDLSGNASEIGKNLGDDLSEGKPTLPLLYAMRNGTADEA 262 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 K I G + E+L + AL A + A ++ DS +K+++ Sbjct: 263 ETIKRAIEHGGL--EDLVTVLSAVERTGALDHVRKVAAKESELACAAIAHFADSPYKQAM 320 Query: 311 MEVVDFCLQR 320 + + +F + R Sbjct: 321 LTLAEFAVAR 330 >gi|157828600|ref|YP_001494842.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933313|ref|YP_001650102.1| decaprenyl diphosphate synthase [Rickettsia rickettsii str. Iowa] gi|157801081|gb|ABV76334.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908400|gb|ABY72696.1| farnesyl pyrophosphate synthetase [Rickettsia rickettsii str. Iowa] Length = 355 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 206/323 (63%), Gaps = 5/323 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K+ +DL ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+ Sbjct: 33 VKIQQDLK-DEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYK 91 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F + Sbjct: 92 GDNHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 151 Query: 121 VIETKSQEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + S +A+ L+ + ++EGE+ QL L++ +T ++Y ++KSKTA LF A V Sbjct: 152 MVASGSIKAMHVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGTACAV 211 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I Sbjct: 212 GTIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLI 271 Query: 240 LAFQRGTKREKNFW-KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 + + ++K W ++ I K + ++ K +M ++ +T + A L Sbjct: 272 FLYNK-LAQDKQLWLENIIKCDKRTKDDFVKIHDLMVKHEIYNETVNYLSNLENAASKLL 330 Query: 299 RCLP-DSSWKKSLMEVVDFCLQR 320 +P + +K L ++ F L R Sbjct: 331 NKIPVQNIYKDYLFSIIKFMLDR 353 >gi|90408282|ref|ZP_01216447.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3] gi|90310583|gb|EAS38703.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3] Length = 325 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 125/320 (39%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ ++ +M KVN LI K++ SDV +I + Y++ SGGKR+RP++T+ A L Sbjct: 5 IKHIQQISNTEMAKVNALISKQLTSDVALIKQLGFYIVNSGGKRIRPLITILAAKALNVH 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA IEF+HTATLLHDDVVD+S LRRGK A ++GN SVLVGDFL +++F M Sbjct: 65 SEKITKLAAIIEFVHTATLLHDDVVDESDLRRGKKTANALFGNAASVLVGDFLYTRSFQM 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E ++ + ++ LS +AEGE+ QL + +++E+ Y+ +I KTA LF AA ++ Sbjct: 125 MSELQNLKVMDVLSRATNIIAEGEVLQLMNCNDANISEKLYMDIIYYKTAKLFEAATQLV 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + AL +YG LG AFQL DDV+DY EMGKN G+D GKPTLP+I Sbjct: 185 GVLAEQTPEIELALLNYGKYLGTAFQLTDDVMDYTSNAQEMGKNSGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT+++K K I +++ + AL + RA KA +++ Sbjct: 245 AMKNGTEKQKALIKDAIEKAN-GMQHFDLIMETLASTNALEYAQARAQEEADKAIEAIAI 303 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ +K++L+ + R Sbjct: 304 LPNNQYKEALVSLAHLAANR 323 >gi|241763806|ref|ZP_04761852.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN] gi|241366938|gb|EER61343.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN] Length = 309 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 125/298 (41%), Positives = 179/298 (60%), Gaps = 2/298 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M +V+ +I +R+ S V ++ + +Y+I +GGKRLRP L L L YRG++ LA + Sbjct: 1 MGEVDHVIAQRLTSSVPLVAQISQYIIAAGGKRLRPALLLLICGALGYRGNHRFSLAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTATLLHDDVVD S LRRG+ A +GN SVLVGDFL +++F M++E + +E Sbjct: 61 ELIHTATLLHDDVVDASTLRRGRATANQTFGNPASVLVGDFLHTRSFQMMVEAGNMRIME 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS +AEGE+ QL + + E YL VI+SKTA LF A+ + +++A + Sbjct: 121 VLSEATNVIAEGEVLQLMNMHDASLDEAGYLQVIRSKTAKLFEASARLGAILAESPPQIE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A +YG LG AFQ++DDVLDY G EMGKN+G+D R GK TLP+I+A QRG + Sbjct: 181 EACATYGQALGTAFQIIDDVLDYDGNTAEMGKNLGDDLREGKSTLPLIVAMQRGNAEQAA 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I +G S + L I+R AL A++ ++A + LP S++ S Sbjct: 241 IVRHAIEEG--STDRLDDVVAIVRNTGALEAARMAAFAEARRAMTAAEQLPASNYATS 296 >gi|157827248|ref|YP_001496312.1| octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389] gi|157802552|gb|ABV79275.1| Octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389] Length = 327 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 128/322 (39%), Positives = 204/322 (63%), Gaps = 3/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K+ +DL ++ ++N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y Sbjct: 5 VKIQQDLK-DEVAQLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F + Sbjct: 64 GDSHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + S +A+ L+ + +++GE+ QL L++ + E+Y ++KSKTA LF A+ V Sbjct: 124 MVASGSIKAMNVLAKASAIISKGEVVQLVKLNERRLINIEEYQQIVKSKTAELFGASCSV 183 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I Sbjct: 184 GAIIANQSDDISKNMEEFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLI 243 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + + K +K K+ I + E + +M +++ D S +A L Sbjct: 244 FLYDKLEKDDKAHLKNMIKSDNRTKEEFVQICDLMVKHKISKDIINHLNSLENEAISLLN 303 Query: 300 CLP-DSSWKKSLMEVVDFCLQR 320 +P + +K+ L ++ F L R Sbjct: 304 KIPVQNIYKEYLFSIIRFILDR 325 >gi|238650786|ref|YP_002916641.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic] gi|238624884|gb|ACR47590.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic] Length = 371 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 206/323 (63%), Gaps = 5/323 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K+ +DL ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+ Sbjct: 49 VKIQQDLK-DEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYK 107 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F + Sbjct: 108 GDNHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 167 Query: 121 VIETKSQEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + S +A+ L+ + ++EGE+ QL L++ +T ++Y ++KSKTA LF A V Sbjct: 168 MVASGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGTACAV 227 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I Sbjct: 228 GAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPMI 287 Query: 240 LAFQRGTKREKNFW-KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 + + ++K W ++ I K + ++ K +M ++ +T + A L Sbjct: 288 FLYNK-LAQDKQLWLENIIKCDKRTKDDFVKIHDLMVKHEIYNETVNYLSNLENAASKLL 346 Query: 299 RCLP-DSSWKKSLMEVVDFCLQR 320 +P + +K L ++ F L R Sbjct: 347 NKIPVQNIYKDYLFSIIKFILDR 369 >gi|68171324|ref|ZP_00544722.1| Farnesyltranstransferase [Ehrlichia chaffeensis str. Sapulpa] gi|88657619|ref|YP_506918.1| octaprenyl-diphosphate synthase [Ehrlichia chaffeensis str. Arkansas] gi|67999251|gb|EAM85903.1| Farnesyltranstransferase [Ehrlichia chaffeensis str. Sapulpa] gi|88599076|gb|ABD44545.1| octaprenyl-diphosphate synthase [Ehrlichia chaffeensis str. Arkansas] Length = 325 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 126/318 (39%), Positives = 201/318 (63%), Gaps = 7/318 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L+ L +D++ + LIL + + +I ++V++LI SGGKR+RP++ ML +N Sbjct: 12 LKSLVQQDLDSMESLILHQNNKHITLITEIVQHLIKSGGKRIRPIIFFIICKMLNCNNEN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 V +A AIE IH ATLLHDDV+D+S LRRG+ + ++WGN+ S+LVGDFLL+ +F +I+ Sbjct: 72 KVPIAAAIELIHNATLLHDDVIDESELRRGEKTSNVIWGNKASILVGDFLLAISFQWLIK 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ L LS + + GE++Q+ S N+++++E Y+ +I +KTA LFSA E ++ + Sbjct: 132 CKNLNILSILSQASKDVIVGEVQQMISSHNINISKEKYIEIISAKTAALFSATCESAANL 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A N ++ALK++G N GI+FQ++DD+LDY + GK +G D GK TLPVI+A+Q Sbjct: 192 AQTSNEEKEALKNFGNNFGISFQIMDDILDYTASGEQFGKKLGNDLLTGKTTLPVIIAYQ 251 Query: 244 RGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 T +EK FW +ISV NL++A ++ + A+ + A +Y +AK L Sbjct: 252 NATSKEKKFW------DQISVNPNLEQAISYIKVHNAIEKSISIATTYINQAKSCLNIFA 305 Query: 303 DSSWKKSLMEVVDFCLQR 320 +S++K L +++D L R Sbjct: 306 ESNYKTHLNKLLDCILYR 323 >gi|57238790|ref|YP_179926.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Welgevonden] gi|58578715|ref|YP_196927.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Welgevonden] gi|58616777|ref|YP_195976.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Gardel] gi|57160869|emb|CAH57771.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Welgevonden] gi|58416389|emb|CAI27502.1| Octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Gardel] gi|58417341|emb|CAI26545.1| Octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Welgevonden] Length = 325 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 124/317 (39%), Positives = 197/317 (62%), Gaps = 5/317 (1%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L+ L +D++++ LIL + ++ +I +++++LI SGGKR+RP++ ML Y ++ Sbjct: 12 LKSLIQQDLDEMEHLILYQDNKNITLITEIIQHLIKSGGKRIRPIIFFIICKMLNYNKND 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 V +A AIEFIH ATLLHDDV+D+S LRRG+ + +WGN+ S+LVGDFLL+ +F +I+ Sbjct: 72 KVYIAAAIEFIHNATLLHDDVIDESELRRGEKTSNFLWGNKASILVGDFLLAVSFQWLIQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ L LS + T+ GE+ Q+ S N+++++E Y+ +I +KTA LF A E ++ + Sbjct: 132 CKNLTILSILSKTSNTIIIGEVEQMVASYNINISQEKYIDIISAKTASLFEATCESAANL 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A V N ALK +G NLGI+FQ++DD+LDY + GK +G D GK TLP+I+A+Q Sbjct: 192 AEVNNEKIHALKQFGYNLGISFQILDDILDYTASETQFGKKLGNDLLTGKITLPIIIAYQ 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 +EK FW + I+ KA ++ + A+ A +Y KAK SL + Sbjct: 252 NANHQEKKFWTQLSTNPDIN-----KAMFYIKSHSAIEQALNIASTYIDKAKSSLNIFAN 306 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K+ L ++++ L R Sbjct: 307 SDYKQILDKLLNSILYR 323 >gi|118580423|ref|YP_901673.1| trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379] gi|118503133|gb|ABK99615.1| Trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379] Length = 322 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 125/310 (40%), Positives = 187/310 (60%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+++V + SDV +I V +Y++ SGGKR+RP L L A + +Y+GD V LA Sbjct: 11 DLKRVEQQFRTDLESDVPLIRKVGEYVLSSGGKRVRPALLLLAARLCDYQGDKAVPLASV 70 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTATLLHDDVVD + LRRG +A +WGN+ SVLVGDFL S++F +++ S + L Sbjct: 71 IEFIHTATLLHDDVVDSATLRRGLASANTLWGNEASVLVGDFLFSKSFSLMVAVGSLDIL 130 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QL + L++TEE Y+ V++SKTA+L SAA E +++ G Sbjct: 131 KVLSDATTVIAEGEVMQLLCTGELELTEERYIDVVRSKTAILMSAACEAGAILGGAAPER 190 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 RQAL +GMNLGIAFQL+DD LDY E GK+IG D GK T+P+I + T E+ Sbjct: 191 RQALSDFGMNLGIAFQLMDDTLDYIATEEEFGKSIGHDLEEGKITMPLIHVLRHCTPSER 250 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + + +++++ ++ +++ + T A Y Q DSL +L Sbjct: 251 DQIATVVEKDEMTLDEFRQVSGLVQRYGGIDYTVDAARRYIQGCADSLSLFASGPVADAL 310 Query: 311 MEVVDFCLQR 320 +++ + + R Sbjct: 311 LDLAGYVVTR 320 >gi|239995268|ref|ZP_04715792.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii ATCC 27126] Length = 324 Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 128/315 (40%), Positives = 187/315 (59%), Gaps = 2/315 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L+ DM+ VN LI +++ SDV +I + Y++ SGGKRLRP+LT+ +A + ++H Sbjct: 9 LSNDDMQAVNQLIQQQVDSDVALINQLGFYIVNSGGKRLRPLLTVLSARAMGIDNNDHHT 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S +RRG+ A ++GNQ SVLVGDFL +++F M++ K Sbjct: 69 LAAIVEFIHTATLLHDDVVDESTMRRGRETANAIFGNQASVLVGDFLYTRSFQMMVSLKR 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E LS +AEGE+ QL + TE Y VI KTA LF AA ++++++ Sbjct: 129 MRVMEILSEATNQIAEGEVLQLMNCNDPSTTEARYFDVIYGKTARLFEAATQLAAVLTDQ 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG- 245 + A++ YG +LG AFQL DD+LDY + EMGKN G+D GKPTLP++ A Sbjct: 189 NEHIEHAMQEYGKHLGTAFQLADDILDYMADSEEMGKNAGDDLAEGKPTLPLLYAMWHAR 248 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 +K + I + +L + IM E AL T A Q A +SL + DS Sbjct: 249 NDDDKALIQEAIEQSN-GLPHLTRIQGIMEETGALDYTRECAQKEVQMAINSLNAIEDSE 307 Query: 306 WKKSLMEVVDFCLQR 320 +K++L+ + ++R Sbjct: 308 YKEALIALAHISIER 322 >gi|304311022|ref|YP_003810620.1| Polyprenyl synthetase [gamma proteobacterium HdN1] gi|301796755|emb|CBL44967.1| Polyprenyl synthetase [gamma proteobacterium HdN1] Length = 322 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 122/315 (38%), Positives = 186/315 (59%), Gaps = 4/315 (1%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L D V+ +I ++I S V ++ + Y+I +GGKRLRP+L L + Y ++ + Sbjct: 9 LVADDFIAVDEIIRQQIQSKVALVQTIGDYIISAGGKRLRPLLVLLGGRAVGYHKEDLRI 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATLLHDDVVD S LRRG+ A WGN SVLVGD+L S++F M++ + Sbjct: 69 LAATIELLHTATLLHDDVVDKSGLRRGRATANAQWGNAPSVLVGDYLYSRSFEMMVGLGN 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ LS +AEGE QLS +++ +EE Y+ +I+SKT+VL A+ ++++A Sbjct: 129 MPVMKILSQATRIMAEGEALQLSRVRDVSTSEETYMQIIRSKTSVLLEASSHSAAVLASA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + R AL+ +G +LGIAFQL+DDVLD+RG+ +GKNIG+D GKPTLP+I + G Sbjct: 189 TDYERHALRGFGEHLGIAFQLIDDVLDFRGDSQALGKNIGDDLAEGKPTLPLIFTMREGN 248 Query: 247 KREKNFWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + I G +E ++ A + L T +A+ + A L LPDS Sbjct: 249 AESAKLIHNAILEGGSPDIEAIRSA---VETAGGLEYTANKAHEHALLACHHLDALPDSP 305 Query: 306 WKKSLMEVVDFCLQR 320 ++++L ++ F + R Sbjct: 306 YRQALHDLSHFAVAR 320 >gi|289209165|ref|YP_003461231.1| trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix] gi|288944796|gb|ADC72495.1| Trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix] Length = 322 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 191/320 (59%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +L DM+ V+ I R+ S V +I + Y+I SGGKRLRP+L +A Sbjct: 3 INAIRELAADDMQAVDQCIRDRLSSPVVLINQLGHYIIHSGGKRLRPLLATLSARACAVE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD V+LA +EFIHTATLLHDDVVD S +RRG A ++GN+ +VLVGDFL S+AF M Sbjct: 63 GDEPVVLAAVVEFIHTATLLHDDVVDASEMRRGNETANHIFGNEAAVLVGDFLYSRAFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S +E L+ +AEGE+ QL + DV E Y++VI+SKTA LF AA ++ Sbjct: 123 MVEVGSMRVMEILAHATNVIAEGEVMQLMNCHDADVDEARYMNVIQSKTAKLFEAACQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + ++L YGM+LG AFQL+DDVLDY + GK +G+D GKPTLP+I Sbjct: 183 AILGERPRAEEESLAHYGMHLGTAFQLIDDVLDYSSDDAVTGKRMGDDLAEGKPTLPLIQ 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT ++ + I DG E ++ I+ AL RA + + A ++ Sbjct: 243 AIRVGTPEQQTVVRQAIEDG--GREQVEAVLEIVHATGALDYARERAAAETEAAIAAVSV 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +++L+++ F + R Sbjct: 301 LPESPHRQALIDLARFAVGR 320 >gi|294789130|ref|ZP_06754369.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453] gi|294482871|gb|EFG30559.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453] Length = 324 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 122/312 (39%), Positives = 193/312 (61%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ +VN ++ + + SDV +I + Y+I +GGKRLRP+LT+ + L Y D LA Sbjct: 15 DLSRVNLVVNQAVQSDVALISQIGTYIIGAGGKRLRPILTILSGKCLGYDDDKLYSLAAM 74 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S + L Sbjct: 75 VEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVGSGSLKIL 134 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E ++ +AEGE+ QL N+D+TE YL VI+ KTA LF AA +V +++AG + Sbjct: 135 EVMADATNIIAEGEVMQLMNIGNIDITEAQYLQVIQYKTAKLFEAAAQVGAILAGATHEQ 194 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ALK++GM +G AFQ++DDVLDY G V ++GKN+G+D GKPTLP+I Q+G Sbjct: 195 ETALKNFGMYMGTAFQIIDDVLDYSGSVEQIGKNVGDDLAEGKPTLPLIYLMQQGNDVAA 254 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 ++ + + E + + E+ AL +A +A L+ LP++ ++ Sbjct: 255 QDVRTALQNA--DREYFDQIHAHVTESDALNYCMEQAKKAVAQAIGCLKMLPENEVTVAM 312 Query: 311 MEVVDFCLQRLN 322 ++ + ++R++ Sbjct: 313 RQMAELSVERVS 324 >gi|15892647|ref|NP_360361.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7] gi|15619817|gb|AAL03262.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7] Length = 371 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 129/323 (39%), Positives = 206/323 (63%), Gaps = 5/323 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K+ +DL ++ K+N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+ Sbjct: 49 VKIQQDLK-DEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYK 107 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F + Sbjct: 108 GDNHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 167 Query: 121 VIETKSQEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + S +A+ L+ + ++ GE+ QL L++ +T ++Y ++KSKTA LF A V Sbjct: 168 MVASGSIKAMNVLAKASAIISAGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGTACAV 227 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++IA + + + ++ +G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I Sbjct: 228 GAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLGNDKQVGKNIGDDFLEGKVTLPLI 287 Query: 240 LAFQRGTKREKNFW-KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 + + ++K W ++ I K + ++ K +M ++ +T + A L Sbjct: 288 FLYNK-LAQDKQLWLENIIKCDKRTKDDFVKIHDLMVKHEIYNETVNYLSNLENAASKLL 346 Query: 299 RCLP-DSSWKKSLMEVVDFCLQR 320 +P + +K L ++ F L+R Sbjct: 347 NKIPVQNIYKDYLFSIIKFILER 369 >gi|89900061|ref|YP_522532.1| farnesyltranstransferase [Rhodoferax ferrireducens T118] gi|89344798|gb|ABD69001.1| Farnesyltranstransferase [Rhodoferax ferrireducens T118] Length = 327 Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 120/271 (44%), Positives = 169/271 (62%), Gaps = 2/271 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM +V+ +I R+ S V ++ V +Y+I +GGKRLRP L L L ++G LA Sbjct: 17 QDMREVDQVIAHRLDSGVPLVGQVARYIIAAGGKRLRPALLLLICGALGFKGAQRFNLAA 76 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHT+TLLHDDVVDDS+LRRG A +GN SVLVGDFL S+ F M+++ ++ Sbjct: 77 VVEFIHTSTLLHDDVVDDSSLRRGNPTANETFGNPASVLVGDFLYSRCFQMMVDAQNMRI 136 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ +AEGE++QL N ++ E YL VI+SKTA LF A+ V +++AG Sbjct: 137 MQVLADATNVIAEGEVQQLMNMHNAELDEAGYLQVIRSKTAKLFEASARVGAILAGSSPE 196 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + + YG LG AFQ++DDVLDY GE MGKN+G+D R GK TLP+I A QRGT + Sbjct: 197 LEEICAEYGQALGTAFQVIDDVLDYTGEAAVMGKNLGDDLREGKTTLPLIAAMQRGTASQ 256 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRAL 280 K I G +++ L + I++ AL Sbjct: 257 SALIKEAIETGGVAM--LDQVIDIVKTTGAL 285 >gi|42520637|ref|NP_966552.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410376|gb|AAS14486.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 328 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 114/318 (35%), Positives = 187/318 (58%), Gaps = 4/318 (1%) Query: 4 LEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L+D+ D+ +N + K + D ++ D++ +L+ SGGK++RP L ML Y G+ Sbjct: 12 LDDIVSSDLSAMNDFVFKNVNDEDAKLATDIISHLVRSGGKKIRPKLVFIICKMLNYSGE 71 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 N + +A ++EFIH ATLLHDDV+D+S R G A +WGN++S+LVGD LL+ AF +I Sbjct: 72 NRINVAASVEFIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLI 131 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E + L LS + L +GE++Q++ + E+Y +I KTA LFSA E +S Sbjct: 132 ECGNLNILSILSKASHLLVKGEIKQMTARFDPHTVRENYFDIIGEKTASLFSACCEAAST 191 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++G N + LK++G N G+AFQ+VDD+LDY GK +G+DF GK TLP I+A+ Sbjct: 192 VSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQGTSGKQVGKDFFEGKVTLPAIIAY 251 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 ++G+ E+ FW+ + + N +A + + A+ + +A Y A++ + Sbjct: 252 EKGSPAEQKFWEKCFSSAR---HNFDQALHYINHHNAIQLSMEKARHYINMAQNDISTFS 308 Query: 303 DSSWKKSLMEVVDFCLQR 320 DS +K +L+ ++ ++R Sbjct: 309 DSFYKTTLINFLNASIER 326 >gi|15604342|ref|NP_220858.1| octaprenyl-diphosphate synthase (ispB) [Rickettsia prowazekii str. Madrid E] gi|3861034|emb|CAA14934.1| OCTAPRENYL-DIPHOSPHATE SYNTHASE (ispB) [Rickettsia prowazekii] gi|292572096|gb|ADE30011.1| Octaprenyl-diphosphate synthase [Rickettsia prowazekii Rp22] Length = 327 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 128/317 (40%), Positives = 206/317 (64%), Gaps = 5/317 (1%) Query: 8 TLKD-MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LKD + ++N LI+ + SD E+I V KYL+ +GGKR+RP+LT+ TA M +Y+G+NH+ Sbjct: 10 NLKDEVTQLNDLIISCLKSDAELIEKVGKYLVEAGGKRIRPLLTIITAKMFDYKGNNHIK 69 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIH ATLLHDDVVD+S LRR K A ++WG++TS+LVGDFL SQ+F +++ + Sbjct: 70 LASAVEFIHAATLLHDDVVDNSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKLMVASGC 129 Query: 127 QEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +A+ L+ + ++EGE+ QL L++ +T ++Y ++KSKTA LF AA EV ++IA Sbjct: 130 IKAMNVLAKASVIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGAACEVGAIIAE 189 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + V + ++++G LG FQ++DD+LDY G ++GKNIG+DF GK TLP+I + + Sbjct: 190 QVDRVSKDVQNFGRLLGTIFQVIDDLLDYLGSDKQVGKNIGDDFLEGKVTLPLIFLYHK- 248 Query: 246 TKREKNFW-KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-D 303 +++K W ++ + K + ++ K +M ++ +T S +A + L +P Sbjct: 249 LEQDKQLWLENMLKSDKRTKDDFVKIRDLMLKHAIYNETVNYLSSLENEANNLLNKIPVQ 308 Query: 304 SSWKKSLMEVVDFCLQR 320 + +K L ++ F L R Sbjct: 309 NIYKYYLFSIIRFILYR 325 >gi|58696807|ref|ZP_00372336.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Drosophila simulans] gi|225630516|ref|YP_002727307.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi] gi|58536990|gb|EAL60142.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Drosophila simulans] gi|225592497|gb|ACN95516.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi] Length = 325 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 114/318 (35%), Positives = 187/318 (58%), Gaps = 4/318 (1%) Query: 4 LEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L+D+ D+ +N + K + D ++ D++ +L+ SGGK++RP L ML Y G+ Sbjct: 9 LDDIVSSDLSAMNDFVFKNVNDEDAKLATDIISHLVRSGGKKIRPKLVFIICKMLNYSGE 68 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 N + +A ++EFIH ATLLHDDV+D+S R G A +WGN++S+LVGD LL+ AF +I Sbjct: 69 NRINVAASVEFIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLI 128 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E + L LS + L +GE++Q++ + E+Y +I KTA LFSA E +S Sbjct: 129 ECGNLNILSILSKASHLLVKGEIKQMTARFDPHTVRENYFDIIGEKTASLFSACCEAAST 188 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++G N + LK++G N G+AFQ+VDD+LDY GK +G+DF GK TLP I+A+ Sbjct: 189 VSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQGTSGKQVGKDFFEGKVTLPAIIAY 248 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 ++G+ E+ FW+ + + N +A + + A+ + +A Y A++ + Sbjct: 249 EKGSPAEQKFWEKCFSSAR---HNFDQALHYINHHNAIQLSMEKARHYINMAQNDISTFS 305 Query: 303 DSSWKKSLMEVVDFCLQR 320 DS +K +L+ ++ ++R Sbjct: 306 DSFYKTTLINFLNASIER 323 >gi|241664241|ref|YP_002982601.1| polyprenyl synthetase [Ralstonia pickettii 12D] gi|240866268|gb|ACS63929.1| Polyprenyl synthetase [Ralstonia pickettii 12D] Length = 325 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 129/311 (41%), Positives = 195/311 (62%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L Y+G++ LA Sbjct: 15 EDMRAVDAVIRRRLGSEVVLINQIGEYIISAGGKRLRPVILLLVANALGYKGEHQHELAA 74 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 75 VVEFIHTATLLHDDVVDESDLRRGRKTANAVFGNAASVLVGDFLYSRAFQMMVQANSMRI 134 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G + Sbjct: 135 MQILADATNIISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGAGAA 194 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + +A YG +G AFQ++DD+LDY ++MGKN G+D R GKPTLP+I GT+ + Sbjct: 195 IEEAAAEYGRRIGTAFQIIDDLLDYTSTADQMGKNAGDDLREGKPTLPLIHLLSNGTEEQ 254 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + I G E+ F ++ + AL T A A+ + LP S ++++ Sbjct: 255 RALVRQAIEQG--GTEHFDAIFAAIQASGALEYTRQAAEREAAAAEAAANALPPSLFRQT 312 Query: 310 LMEVVDFCLQR 320 L+++ F LQR Sbjct: 313 LIDLCAFSLQR 323 >gi|88607042|ref|YP_505772.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ] gi|88598105|gb|ABD43575.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ] Length = 316 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 128/322 (39%), Positives = 196/322 (60%), Gaps = 10/322 (3%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MK+L L++ME LI+K+ S+V++I D++++LI SGGKR RP++ LA ML Sbjct: 1 MKLLVASELQEMES---LIVKQRHSEVQLIADIIQHLILSGGKRTRPVMLLAACGMLGCT 57 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 +++A AIEF+H+ATLLHDDVVD S +RRG A +WGN+ S+LVGDFL + AF Sbjct: 58 DARRIVVAAAIEFLHSATLLHDDVVDKSDMRRGVETANSIWGNKASILVGDFLFATAFQW 117 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S + L LS A + GE++QL S +LD++ YL +I SKTAVLFSAA E + Sbjct: 118 IVSCNSIQLLSVLSNTASIIVSGEMQQLVHSSSLDISRTKYLEIISSKTAVLFSAACESA 177 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ V R AL+ +G N GI FQ++DD+LDY NE+GK D +GK TLP+I+ Sbjct: 178 AVLHDVGTLQRNALRDWGFNFGIVFQILDDILDYTANQNELGKRTYNDIVSGKVTLPLII 237 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKK--AFIIMRENRALVDTEYRAYSYGQKAKDSL 298 A++ +++++ + G +S E AF + A+ + A Y A+ L Sbjct: 238 AYEGASEKDRIGLR-----GALSRERPDPDLAFSYIMAQNAIEKSVGLAKEYIAIAEKQL 292 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 PDS++K+ L+ +++ + R Sbjct: 293 SHFPDSAYKQKLLNLLNSAVNR 314 >gi|239817188|ref|YP_002946098.1| trans-hexaprenyltranstransferase [Variovorax paradoxus S110] gi|239803765|gb|ACS20832.1| Trans-hexaprenyltranstransferase [Variovorax paradoxus S110] Length = 345 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 116/258 (44%), Positives = 166/258 (64%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL DM +V+ +I +R+ + V ++ V KY+I +GGKRLRP L L + L Y G+ Sbjct: 31 DLIAGDMVEVDRVIAQRLDTGVPLVSQVSKYIISAGGKRLRPALLLLMSGALGYTGEQRF 90 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M+++ Sbjct: 91 NLAAVVEFIHTATLLHDDVVDESTLRRGRPTANESFGNPASVLVGDFLYSRAFQMMLDAN 150 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + ++ L+ +AEGE+ QL + + E YL VI+SKTA LF A+ +++++AG Sbjct: 151 NMRIMQILAEATNVIAEGEVLQLMNMHDATLDESAYLRVIRSKTAKLFEASTRLAAVLAG 210 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 V +A +YG LG AFQ++DDVLDY G+ +E GKN+G+D R GK TLP+I A +RG Sbjct: 211 ATPEVEEACATYGQALGTAFQVIDDVLDYAGDAHETGKNVGDDLREGKTTLPLIFAMRRG 270 Query: 246 TKREKNFWKSTINDGKIS 263 + + ++ I G + Sbjct: 271 SPAQATLVRAAIEAGDTA 288 >gi|110833312|ref|YP_692171.1| transferase [Alcanivorax borkumensis SK2] gi|110646423|emb|CAL15899.1| transferases [Alcanivorax borkumensis SK2] Length = 307 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 124/308 (40%), Positives = 189/308 (61%), Gaps = 5/308 (1%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +N I + S+V +I +V Y+I SGGKRLRP++ + A Y+G HV +A IEF+ Sbjct: 1 MNQFISHHLDSNVPLIREVGDYIIQSGGKRLRPLIAVLCARASGYQGSRHVDVAAIIEFL 60 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATLLHDDVVD+S LRRG+ VWGN SVLVGDFL+S+A +++ + L+ S Sbjct: 61 HTATLLHDDVVDESNLRRGRPTVNAVWGNAASVLVGDFLISRALQLMVALRHPRLLDIFS 120 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQ 192 T++EGE+ QL ++ + +E++Y+ VI KTA +F +A E +++ V + V Sbjct: 121 QSTNTISEGEVLQLINVRDPNTSEDNYMRVIHHKTAKMFESAAETGAVLGANDVSDHV-D 179 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 A +YG +LGIAFQL+DDVLDY+G+ +E+GKN+G+D GKPTLP+I G+ + Sbjct: 180 AFATYGRHLGIAFQLIDDVLDYQGDASELGKNVGDDLAEGKPTLPLIHTIANGSAEQATL 239 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 K I G +E+L++ +R + L T +A + A D++ +P S +K +L Sbjct: 240 IKDAIRSG--GLEHLEQIVETVRASGGLQYTVDKAAEQTRIALDAIAQVPASPYKDALFR 297 Query: 313 VVDFCLQR 320 + + L+R Sbjct: 298 LAEESLKR 305 >gi|88813013|ref|ZP_01128256.1| Trans-hexaprenyltranstransferase [Nitrococcus mobilis Nb-231] gi|88789791|gb|EAR20915.1| Trans-hexaprenyltranstransferase [Nitrococcus mobilis Nb-231] Length = 253 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 119/242 (49%), Positives = 154/242 (63%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L D+E VN LI KR+ SDV +I + Y+I SGGKRLRP++ L A R H+L Sbjct: 9 LVAHDIEAVNELIRKRLSSDVVLINRLGSYIINSGGKRLRPLVVLLAARACSCRDHQHIL 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTATLLHDDVVD+S +RRG+ AR +WGN SVLVGDFL ++AF M++E + Sbjct: 69 LAAIVEMIHTATLLHDDVVDESDMRRGRETARQIWGNGASVLVGDFLYTRAFEMMVELQQ 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + S T+AEGE+ QL + DVTEE Y VI KTA LF A +++L+ Sbjct: 129 TAVMGIFSRATNTIAEGEVLQLLNIHDPDVTEERYREVIFRKTAALFEAGCRLAALLGAR 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + A+ +YG +LG AFQL+DD LDY G E+GKNIG+D GKPT+P I A Q G Sbjct: 189 SVQDQAAMAAYGRHLGTAFQLIDDALDYDGNAQEIGKNIGDDLAEGKPTMPFIYAMQNGD 248 Query: 247 KR 248 + Sbjct: 249 AK 250 >gi|302038674|ref|YP_003798996.1| polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii] gi|300606738|emb|CBK43071.1| Polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii] Length = 334 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 118/315 (37%), Positives = 190/315 (60%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D+ +++E V I K + S V ++ V +++ SGGKR+RP+ L +A + Y G +H Sbjct: 18 DVYREELEGVEEQIRKNLDSSVALVNTVAAHILNSGGKRVRPLFVLLSAHLCGYAGQDHQ 77 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 L +EFIHTATLLHDDVVD++ LRRG+ A VWGNQ S+LVGD+L S+A C +++ + Sbjct: 78 ALGSLVEFIHTATLLHDDVVDEADLRRGRRTASKVWGNQISILVGDYLYSRAICQIVDFR 137 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +Q EALS +AEGE+ QL + N + E +YL +I+ KTA L +A+ ++ +++ G Sbjct: 138 NQGINEALSEACRKMAEGEVLQLYYNGNPLMPESEYLRIIEHKTAGLIAASCKIGAIVGG 197 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 +++AL +G LGIAFQL DD LDY +GK +G+D R GK TLP++ Q Sbjct: 198 ATEELQEALFRFGQRLGIAFQLADDTLDYTANGEHLGKTLGQDLRQGKATLPLLHLLQHC 257 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 ++ ++ K + ++ E L++ +M+E ++ RA+++ AK L D++ Sbjct: 258 SEPDRQLIKDRMETRTLTDEELRRIVGLMQEYGSIAYAMERAHAFVAAAKRDLDLFHDNT 317 Query: 306 WKKSLMEVVDFCLQR 320 K++L D+ + R Sbjct: 318 AKRALAIAADYMVTR 332 >gi|330448814|ref|ZP_08312461.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328493005|dbj|GAA06958.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 323 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 131/319 (41%), Positives = 191/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM +V+ I ++ SDV +I + Y++ SGGKRLRPML + A L Y G Sbjct: 4 KAIQALTANDMAQVDAKIQAQLNSDVALINQLGFYIVSSGGKRLRPMLAVLAARALGYDG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H A +EFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 64 EKHTTAAAFVEFIHTATLLHDDVVDESDMRRGKETANAAFGNAASVLVGDYIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +S + L+ +S +AEGE+ QL + D TE+ Y+ VI SKTA LF A+ ++++ Sbjct: 124 TSLRSLKILDIMSEATNVIAEGEVLQLMNCNDPDTTEDSYMQVIYSKTARLFEASTQIAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IA + A + YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A Sbjct: 184 IIADAPAEIELAFQEYGRYLGTAFQLIDDVLDYIADGKEMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G + + I +E L M E+ +L T+ RA +KA +L + Sbjct: 244 MHHGNAEQTAMIREAIEKAN-GMEKLDAILACMHEHGSLEYTQKRAEEEAEKAIAALAPI 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 DS +K++L+ + +QR Sbjct: 303 ADSDYKEALIALAHMAVQR 321 >gi|124516584|gb|EAY58092.1| trans-hexaprenyltranstransferase [Leptospirillum rubarum] Length = 330 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 114/293 (38%), Positives = 179/293 (61%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 + I +V ++I SGGKRLRP+L + + + Y G + LL+ +EFIHTATLLHDDVVD Sbjct: 36 DYIREVTSHIIQSGGKRLRPLLMIIASRISGYSGPHISLLSAVVEFIHTATLLHDDVVDH 95 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 + +RRGK++A +WGNQT+VLVGD+L + A M + E + L+L ++EGE+ + Sbjct: 96 AEMRRGKLSANQIWGNQTAVLVGDYLYATALWMATGVHNHEINDTLTLACRKMSEGEVLE 155 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 L L NL EEDYL V++ KTA L + + +++ G ++AL+ +G N+G++FQ+ Sbjct: 156 LILDNNLSAREEDYLSVVECKTAALTAGTCRIGAILGGADTEKKKALEDFGYNIGMSFQI 215 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DD LDY +GK +G+D GK TLP++ R T ++ I G ++ ++L Sbjct: 216 ADDALDYMAREERLGKTLGKDLSEGKMTLPLLHCLSRATSAQRESLVQKIGKGDVTEQHL 275 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +M+ +L + +A S+ QKAK SL PDS K++L+ + DF ++R Sbjct: 276 HEVIELMKSTGSLEFSLEKAISFVQKAKASLEAFPDSLHKQNLLFLSDFVIER 328 >gi|222475573|ref|YP_002563990.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Florida] gi|255003563|ref|ZP_05278527.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Puerto Rico] gi|222419711|gb|ACM49734.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Florida] Length = 327 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 125/317 (39%), Positives = 185/317 (58%), Gaps = 3/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L+ L L+D++ + LI+ SD+ I D+V +L+ SGGKR+RP+L LA ML + Sbjct: 12 LKSLVLEDLQAMEQLIVDTSNSDISYIADIVSHLMLSGGKRIRPILLLAVCKMLALADER 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + +A AIEFIH+ATLLHDDVVD S LRRG + +WGN+ S+LVGDFLL+ AF ++ Sbjct: 72 RIRIAAAIEFIHSATLLHDDVVDQSELRRGAKTSNSLWGNKASILVGDFLLAAAFQWIVS 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E L LS + T+ GE++Q+ SKNLD+T E Y+ +I +KTA LFSA E + ++ Sbjct: 132 CGNFELLTVLSGASRTIVAGEIQQMVYSKNLDITREKYIEIISAKTAALFSATCESAGVL 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + R+AL+ +G N GI FQ+VDD+LDY + + GK +D NG+ TLP+I+A++ Sbjct: 192 SESPHGNREALRDFGHNFGITFQIVDDLLDYTAQHEQWGKAHSQDLNNGQVTLPLIMAYE 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 K + + +E I N T++ A Y A L P+ Sbjct: 252 EADSAGKEMLRGALAGRTADIETAHS--YITSLNIVQKATKFAA-EYVDAANRFLEPFPN 308 Query: 304 SSWKKSLMEVVDFCLQR 320 S K L +++ LQR Sbjct: 309 SQCKSKLSALLNSALQR 325 >gi|121610836|ref|YP_998643.1| dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2] gi|121555476|gb|ABM59625.1| Dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2] Length = 342 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 125/303 (41%), Positives = 183/303 (60%), Gaps = 2/303 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +V+ +I +R+ S+V ++ V +++I +GGKRLRP L L L Y G + + Sbjct: 29 LVADDMREVDKVIGQRLLSNVPLVDWVARHIIAAGGKRLRPALLLMVCGALGYGGAHRLS 88 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTATLLHDDVVD S LRRG+ A ++G VLVGDFL +++F ++ET + Sbjct: 89 LAAVVELIHTATLLHDDVVDASTLRRGRPTANEIFGAPACVLVGDFLHTRSFQTMVETGN 148 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E L+ +AEGE+ QL + + E YL VI+SKTA LF A+ + +++A Sbjct: 149 MRVMEILAEATNVIAEGEVLQLMNMHDATLDEAGYLRVIRSKTAKLFEASARLGAVLARS 208 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QA +YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I A QRG+ Sbjct: 209 SPDIEQACATYGQALGTAFQIIDDVLDYDGDSAEMGKNLGDDLREGKATLPLIAAMQRGS 268 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + I +G S E L + I+R AL T A + ++A + + LP +++ Sbjct: 269 PGQALIVRQAIKEG--STEQLAEIVGIVRATGALEVTRAAACTEARRAMSAAQQLPSNAY 326 Query: 307 KKS 309 K Sbjct: 327 SKG 329 >gi|206603458|gb|EDZ39938.1| Trans-hexaprenyltranstransferase [Leptospirillum sp. Group II '5-way CG'] Length = 330 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 113/293 (38%), Positives = 181/293 (61%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 + I +V ++I SGGKRLRP+L + + + Y G + LL+ +EFIHTATLLHDDVVD Sbjct: 36 DYIREVTSHIIQSGGKRLRPLLMIIASRISGYSGPHISLLSAVVEFIHTATLLHDDVVDH 95 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 + +RRGK++A +WGNQT+VLVGD+L + A M + E + L+L ++EGE+ + Sbjct: 96 AEMRRGKLSANQIWGNQTAVLVGDYLYATALWMATGVHNHEINDTLTLACRKMSEGEVLE 155 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 L L NL EEDYL+V++ KTA L + + +++ G +++L+ +G N+G++FQ+ Sbjct: 156 LILDNNLSAREEDYLNVVECKTAALTAGTCRIGAILGGADPEKKKSLEDFGYNIGMSFQI 215 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DD LDY +GK +G+D GK TLP++ R T ++ I G ++ ++L Sbjct: 216 ADDALDYMAREERLGKTLGKDLSEGKMTLPLLHCLSRATSTQRESLVQKIGKGDVTKQHL 275 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ +M+ +L + +A S+ QKAK SL PDS K++L+ + DF ++R Sbjct: 276 REVVDLMKSTGSLEFSLEKAISFMQKAKASLEAFPDSLHKQNLLFLSDFVIER 328 >gi|90416595|ref|ZP_01224526.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium HTCC2207] gi|90331794|gb|EAS47022.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium HTCC2207] Length = 331 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 123/322 (38%), Positives = 192/322 (59%), Gaps = 13/322 (4%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D VN LI+ + S+V ++ ++ Y++ SGGKRLRP++ L +AL Y+G H+ +A Sbjct: 11 DFSAVNELIIANLQSNVGLVENIGHYIVGSGGKRLRPVVVLLSALASGYQGKQHLTMAAV 70 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTATLLHDDVVD SALRRG+ A WGN SVLVGDF+ S+AF M+++ + Sbjct: 71 IEFIHTATLLHDDVVDVSALRRGRETANNQWGNAPSVLVGDFIYSRAFQMLVDVGDMPIM 130 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA------ 184 ++ ++EGE++Q+ + N + E Y VI KTA LF AA + +++A Sbjct: 131 GVIADATNLISEGEVQQMGNAGNSAIDEATYYEVIYRKTAKLFEAAARIGAMLAAEEADL 190 Query: 185 -----GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + ++ A+ +YG +LG+AFQ+ DDV+DY+G+ +GKN+G+D GK TLP+I Sbjct: 191 FVGDSAILDARTDAMAAYGKHLGLAFQIADDVMDYQGDSQSIGKNVGDDLAEGKMTLPLI 250 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A ++K S I S E+ +K +R++ +L + +A + AK SL Sbjct: 251 HARDHLDDQKKQLICSAIE--SKSAEHFEKILAAVRQSSSLEYSVTQAQEQAELAKQSLA 308 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 +P+S +K+ L ++ DF + R+ Sbjct: 309 QMPESDFKEVLSDLADFAVSRI 330 >gi|56417209|ref|YP_154283.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St. Maries] gi|56388441|gb|AAV87028.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St. Maries] Length = 327 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 124/317 (39%), Positives = 185/317 (58%), Gaps = 3/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L+ L L+D++ + LI+ SD+ I D++ +L+ SGGKR+RP+L LA ML + Sbjct: 12 LKSLVLEDLQAMEQLIVDTSNSDISYIADIISHLMLSGGKRIRPILLLAVCKMLALADER 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + +A AIEFIH+ATLLHDDVVD S LRRG + +WGN+ S+LVGDFLL+ AF ++ Sbjct: 72 RIRIAAAIEFIHSATLLHDDVVDQSELRRGAKTSNSLWGNKASILVGDFLLAAAFQWIVS 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E L LS + T+ GE++Q+ SKNLD+T E Y+ +I +KTA LFSA E + ++ Sbjct: 132 CGNFELLTVLSGASRTIVAGEIQQMVYSKNLDITREKYIEIISAKTAALFSATCESAGVL 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + R+AL+ +G N GI FQ+VDD+LDY + + GK +D NG+ TLP+I+A++ Sbjct: 192 SESPHGNREALRDFGHNFGITFQIVDDLLDYTAQHEQWGKAHSQDLNNGQVTLPLIMAYE 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 K + + +E I N T++ A Y A L P+ Sbjct: 252 EADSAGKEMLRGALAGRTADIETAHS--YITSLNIVQKATKFAA-EYVDAANRFLEPFPN 308 Query: 304 SSWKKSLMEVVDFCLQR 320 S K L +++ LQR Sbjct: 309 SQCKSKLSALLNSALQR 325 >gi|329893636|ref|ZP_08269770.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088] gi|328923563|gb|EGG30875.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088] Length = 320 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 123/311 (39%), Positives = 189/311 (60%), Gaps = 2/311 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 E VN LI++++ SDV ++ D+ +Y++ GGKR+RP+L L T L H A I Sbjct: 12 FEDVNTLIVEQLRSDVGLVEDIGQYIVAGGGKRMRPLLALLTGAALGGISQPHKHFAAVI 71 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EF+HTATLLHDDVVD S+LRRG+ A +GN +SVLVGDF+ S+AF +++ L+ Sbjct: 72 EFLHTATLLHDDVVDVSSLRRGRPTANAAYGNASSVLVGDFIYSRAFQLLVNIGDMRILK 131 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 ++ +AEGE+ QL + + D TE Y VI++KTAVLF AA +L++G Sbjct: 132 DIADTTNRIAEGEVLQLVRAGDADTTETQYYEVIQAKTAVLFGAACYGGALLSGASERKA 191 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + L+ +G+NLGIAFQ+VDD+LDY+G+ MGKN+G+D GKPTLP+I A Q ++ + Sbjct: 192 EELREFGINLGIAFQIVDDILDYQGDPATMGKNLGDDLAEGKPTLPLIHAIQTAKAQDAD 251 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 ++ I + S+ L I++ + +L + RA + KA+ ++ LP K +L Sbjct: 252 LIRTAITEKDKSL--LSDVVRIIQASGSLAYSRERALEFQHKAEQAISKLPAGQMKDALT 309 Query: 312 EVVDFCLQRLN 322 + + R++ Sbjct: 310 ALAQQAISRIH 320 >gi|326318388|ref|YP_004236060.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375224|gb|ADX47493.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 326 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 131/314 (41%), Positives = 194/314 (61%), Gaps = 2/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L +DM +V+ +I R+ S V +I ++ +Y+I +GGKRLRP L L + L Y+G Sbjct: 13 LIAEDMHEVDKVIGLRLQSSVPLIGEIARYIISAGGKRLRPALLLLMSGALGYQGAQRFN 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IEFIHTATLLHDDVVD+S +RRG+ A +GN SVLVGDFL S+AF M+++ Sbjct: 73 LAAVIEFIHTATLLHDDVVDESTMRRGRPTANENFGNPASVLVGDFLHSRAFQMMVDADD 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ LS +AEGE++QL + + + E+ YL VI+SKTA LF A+ +++++A Sbjct: 133 MRVMQILSEATNIIAEGEVQQLMNTHDATLDEQGYLEVIRSKTAKLFEASARLAAVLARA 192 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +A YG LG AFQ++DDVLDY G EMGKN+G+D R GK TLP+I+A QRG Sbjct: 193 PAPIEEACAEYGKALGTAFQVIDDVLDYDGNSAEMGKNLGDDLREGKVTLPLIIAMQRGD 252 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ ++ I G S++ L I+++ AL T A + Q+A +L LP + + Sbjct: 253 AAQRQLIETAIQQG--SLDELPAILAIVKQTGALEATRAAAAAQAQEAIRALSALPSNKY 310 Query: 307 KKSLMEVVDFCLQR 320 + L+++ L R Sbjct: 311 TEGLLQLASQLLDR 324 >gi|326793607|ref|YP_004311427.1| trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1] gi|326544371|gb|ADZ89591.1| Trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1] Length = 329 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 128/326 (39%), Positives = 192/326 (58%), Gaps = 9/326 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-------M 56 + D+ + +VN IL ++ S++ +I + Y+I +GGKR+RP++ L A + Sbjct: 6 IHDVVADEFSQVNDYILSQLKSEIPLIEQIGYYIISNGGKRMRPLMVLLAARAAQPAQGL 65 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 E + + V +A IEFIHTATLLHDDVVD+S +RRGK A WGN SVLVGDFL S+ Sbjct: 66 SETQLSHTVKMASIIEFIHTATLLHDDVVDESDMRRGKKTANEEWGNAPSVLVGDFLYSR 125 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ S +E LS ++EGE++QL + D +EE YL VI+ KTA LF A Sbjct: 126 AFQIMVNVGSVPCMEILSNTTNIISEGEVQQLINCGDPDTSEESYLKVIQYKTAKLFEGA 185 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +++AG ++AL++YGM +G AFQLVDDV+DY EMGK++G+D GKPTL Sbjct: 186 ALCGAVVAGASEEHQKALQAYGMYVGTAFQLVDDVMDYVSTAEEMGKSVGDDLAEGKPTL 245 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 P+I + G K + I G +ENL++ +R A+ TE +A A Sbjct: 246 PLIYTMKHGDADAKERVRQAILTG--GLENLEQILSDVRACGAIEYTEKQAEEQADLAIK 303 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 +++ P+S K +L+ + + ++R N Sbjct: 304 AIQAFPESEHKSALIALANAAVKRRN 329 >gi|89075549|ref|ZP_01161954.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34] gi|89048689|gb|EAR54261.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34] Length = 323 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 132/319 (41%), Positives = 192/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM +V+ I ++ S+V +I + Y++ SGGKRLRPML + A L Y G Sbjct: 4 KAIQALTANDMAEVDAKIQAQLNSEVVLINQLGFYIVSSGGKRLRPMLAVLAARALGYDG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 64 DKHTTAAAFIEFIHTATLLHDDVVDESNMRRGKETANAAFGNAASVLVGDYIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +S + L+ +S +AEGE+ QL + + TE+ Y+ VI SKTA LF A+ ++++ Sbjct: 124 TSLRSLKILDIMSEATNVIAEGEVLQLMNCNDPNTTEDSYMQVIYSKTARLFEASTQIAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IA + AL+ YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A Sbjct: 184 IIAQAPAEIELALQEYGRYLGTAFQLIDDVLDYIADGKEMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G + + I +E L M E+ +L T+ RA +KA +L + Sbjct: 244 MNHGNAEQSTMIREAIEKAN-GMEKLDAILAAMHEHGSLEYTQQRAEEEAEKAIAALAPI 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 DS +K++L+ + +QR Sbjct: 303 ADSQYKEALVALAHMAVQR 321 >gi|254995376|ref|ZP_05277566.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Mississippi] gi|255004689|ref|ZP_05279490.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Virginia] Length = 327 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 125/317 (39%), Positives = 184/317 (58%), Gaps = 3/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L+ L L+D++ + LI+ SD+ I D+V +L+ SGGKR+RP+L LA ML + Sbjct: 12 LKSLVLEDLQAMEQLIVDTSNSDISYIADIVSHLMLSGGKRIRPILLLAVCKMLALADER 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + +A AIEFIH+ATLLHDDVVD S LRRG + +WGN+ S+LVGDFLL+ AF ++ Sbjct: 72 RIRIAAAIEFIHSATLLHDDVVDQSELRRGAKTSNSLWGNKASILVGDFLLAAAFQWIVS 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E L LS + T+ GE++Q+ SKNLD+T E Y+ +I +KTA LFSA E + ++ Sbjct: 132 CGNFELLTVLSGASRTIVAGEIQQMVYSKNLDITREKYIEIISAKTAALFSATCESAGVL 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + R+AL+ +G N GI FQ+VDD+LDY + + GK +D NG+ TLP+I+A++ Sbjct: 192 SESPHGNREALRDFGHNFGITFQIVDDLLDYTAQHEQWGKAHSQDLNNGQVTLPLIMAYE 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 K + + +E I N T++ A Y A L P+ Sbjct: 252 EADSAGKEMLRGALAGRTADIETAHS--YITSLNIVQKATKFAA-EYVDAANRFLEPFPN 308 Query: 304 SSWKKSLMEVVDFCLQR 320 S K L ++ LQR Sbjct: 309 SQCKSKLSALLHSALQR 325 >gi|296160521|ref|ZP_06843337.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1] gi|295889270|gb|EFG69072.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1] Length = 330 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 131/312 (41%), Positives = 180/312 (57%), Gaps = 4/312 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLA 68 +DM++VN +I R+ SDV +I + +Y+I +GGKRLRP L L A L E G H L A Sbjct: 20 EDMQQVNRVIRHRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGETTGHRHEL-A 78 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 79 AVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKMR 138 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 139 VMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGSDA 198 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 KTEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTPE 258 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 259 QSALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECAKQEAQAAATAISSFPDSIFKD 316 Query: 309 SLMEVVDFCLQR 320 SL+E+ + R Sbjct: 317 SLLELCSYSTAR 328 >gi|294626299|ref|ZP_06704902.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666655|ref|ZP_06731892.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599445|gb|EFF43579.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603561|gb|EFF46975.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 332 Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 117/252 (46%), Positives = 158/252 (62%), Gaps = 2/252 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI- 239 +L +G V+Q L YGM LG AFQ+ DDVLDY E +++GKN+G+D GK TLP+I Sbjct: 193 ALASGASEQVQQQLYDYGMQLGFAFQIADDVLDYAAEASDLGKNLGDDLAEGKATLPLIH 252 Query: 240 -LAFQRGTKREK 250 +A T RE+ Sbjct: 253 AMAHSDATTRER 264 >gi|237747110|ref|ZP_04577590.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS] gi|229378461|gb|EEO28552.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS] Length = 329 Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 123/312 (39%), Positives = 191/312 (61%), Gaps = 2/312 (0%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L D+E V+ +I +++ SD+ ++ + +YLI +GGKR+RP+L L A L Y+G H LA Sbjct: 18 LPDLEAVDRIIRQQMHSDIALVGRIAEYLINAGGKRIRPVLVLLMAKALGYQGKQHQTLA 77 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IEFIHTATLLHDDVVD+S LRRG +A ++GN +SVLVGDFL ++AF M++ + Sbjct: 78 ATIEFIHTATLLHDDVVDESELRRGIPSANALFGNASSVLVGDFLYTRAFQMMVSVGNMR 137 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 LE L+ +AEGE+ QL ++N + E+ Y+ VI +KTA LF A+ + +L+A V Sbjct: 138 ILEVLAEATNLIAEGEVMQLMNARNAAIDEDGYMKVIYAKTAKLFEASSVLGALVAHVSE 197 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 A +G +G+AFQL+DD+LDY G+ GKN+G D + GK TLP+I + G+++ Sbjct: 198 EKIGAAARFGRAVGMAFQLIDDMLDYAGDTGVTGKNVGNDLKEGKMTLPLIYLMKNGSEK 257 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 +K + ++ + S +R + A+ T +A +A +L L +KK Sbjct: 258 QKASVRKSVEENDESC--FPAVLNAVRSSGAMDYTYQKARQAVAEAVQALSALDSGQYKK 315 Query: 309 SLMEVVDFCLQR 320 SL+++ F ++R Sbjct: 316 SLLKLSSFSVER 327 >gi|153217175|ref|ZP_01950939.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587] gi|124113799|gb|EAY32619.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587] Length = 282 Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 118/281 (41%), Positives = 168/281 (59%), Gaps = 1/281 (0%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGKRLRP+L + +A L Y+G +H A IEFIHTATLLHDDVVD+S LRRGK A Sbjct: 1 GGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANA 60 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 +GN SVLVGDF+ +++F M+ E S + L+ +S +AEGE++QL + D TE Sbjct: 61 AFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEA 120 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 Y+ VI SKTA LF AA ++ +++ V A+++YG LG AFQL+DDV+DY + + Sbjct: 121 SYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGD 180 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279 EMGKN+G+D GKPTLP++ A Q G + + I + L + M + + Sbjct: 181 EMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGS 239 Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 L T +A KA L LP+S +K++L+ + + R Sbjct: 240 LQYTIEKALHEADKAIAELAVLPESEYKQALITLAHMAVNR 280 >gi|21243633|ref|NP_643215.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri str. 306] gi|21109209|gb|AAM37751.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri str. 306] Length = 332 Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 127/322 (39%), Positives = 182/322 (56%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I Sbjct: 193 ALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + +R L + RA Y A+ +L Sbjct: 253 AMAHSDATTRERLRQIVEQGDAAA--MPEVLAAIRATGGLDYSRQRAAEYAAAAEQALET 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S+ +L + + ++R + Sbjct: 311 LPHSAAVAALRGLARYAVERTH 332 >gi|58584789|ref|YP_198362.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419105|gb|AAW71120.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 328 Score = 228 bits (581), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 113/319 (35%), Positives = 195/319 (61%), Gaps = 4/319 (1%) Query: 3 MLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 +L+D+ D+ + I + + + DV++ D++ +L+ SGGK++RP L ML Y G Sbjct: 11 ILDDIVSSDLSAMKNFIFRDVNNGDVKLAADIISHLVRSGGKKVRPKLVFIICKMLNYSG 70 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 ++ V +A ++EFIH ATLLHDDV+D+S R G A +WGN++S+LVGD LL+ AF + Sbjct: 71 EDRVKVAASVEFIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWL 130 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 IE + L LS + +L GE++Q++ N ++Y +I KTA LFSA E +S Sbjct: 131 IECGNLNILSILSGASHSLVNGEIKQMAARFNSHTIRKNYFDIIGKKTASLFSACCEAAS 190 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +I+ ++ + LK++G+N G+AFQ++DD LDY + GK +G+DF GK TLP I+A Sbjct: 191 VISNATSNETERLKNFGLNFGMAFQIIDDTLDYTADQRTSGKQVGKDFFEGKVTLPAIIA 250 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 +++G+ E+ FW+ + ++ N +A + + A+ + +A Y A++++ Sbjct: 251 YEKGSPAEQKFWEKCFS---LAERNFDQALHYINHHNAIQLSIEKARHYVNMAQNNINTF 307 Query: 302 PDSSWKKSLMEVVDFCLQR 320 DSS+K +L++ ++ ++R Sbjct: 308 SDSSYKIALIDFLNASIER 326 >gi|225024258|ref|ZP_03713450.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC 23834] gi|224943283|gb|EEG24492.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC 23834] Length = 339 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 124/331 (37%), Positives = 197/331 (59%), Gaps = 14/331 (4%) Query: 1 MKMLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54 + MLE L +D+ +VN +I + + S+V +I + +Y+I +GGKRLRP+LT+ + Sbjct: 14 ITMLEHLPYFQQHLPRDLSRVNAVIERAVQSEVALISQIGRYIISAGGKRLRPVLTILSG 73 Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 +L Y D LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL Sbjct: 74 KVLGYDEDPLYALAAMVEFIHTSTLLHDDVVDESELRRGRKTANNMFGNAAAVLVGDFLY 133 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 ++AF +++ + S + L+ ++ +AEGE+ QL N ++TE +Y+ VI+ KTA LF Sbjct: 134 TRAFQLMVSSGSLKILDVMADATNIIAEGEVLQLMNIGNTNITEAEYVQVIQYKTAKLFE 193 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 AA +V +++AG ALK YG ++G AFQ++DDVLDY G + E+GKN+G+D GKP Sbjct: 194 AAAQVGAILAGATPEQENALKDYGRHIGTAFQIIDDVLDYSGNIEEIGKNVGDDLAEGKP 253 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 TLP+I Q + + + S A ++ + A +E R + Sbjct: 254 TLPLIYLMQNAEPPVADAVRHALEHADRSYFEQIHAHVVQSDALAYCVSEAR-----KAV 308 Query: 295 KDSLRC---LPDSSWKKSLMEVVDFCLQRLN 322 ++L C LPD+ +++ ++ + L R++ Sbjct: 309 DEALSCLAALPDNEVSQAMRQLAEESLARVS 339 >gi|78048606|ref|YP_364781.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037036|emb|CAJ24768.1| Octaprenyl-diphosphate synthase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 332 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 117/252 (46%), Positives = 157/252 (62%), Gaps = 2/252 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI- 239 +L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I Sbjct: 193 ALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGKNLGDDLAEGKATLPLIH 252 Query: 240 -LAFQRGTKREK 250 +A T RE+ Sbjct: 253 AMAHSDATTRER 264 >gi|90580809|ref|ZP_01236612.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14] gi|90438077|gb|EAS63265.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14] Length = 323 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 131/319 (41%), Positives = 192/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM +V+ I ++ S+V +I + Y++ SGGKRLRPML + A L Y G Sbjct: 4 KAIQALTANDMAEVDAKIQAQLNSEVVLINQLGFYIVSSGGKRLRPMLAVLAARALGYDG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 64 DKHTTAAAFIEFIHTATLLHDDVVDESNMRRGKETANAAFGNAASVLVGDYIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +S + L+ +S +AEGE+ QL + + TE+ Y+ VI SKTA LF A+ ++++ Sbjct: 124 TSLRSLKILDIMSEATNVIAEGEVLQLMNCNDPNTTEDSYMQVIYSKTARLFEASTQIAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IA + A + YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A Sbjct: 184 IIADAPAEIELAFQEYGRYLGTAFQLIDDVLDYIADGKEMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G + + I +E L M E+ +L T+ RA +KA +L + Sbjct: 244 MRHGNAEQAAMIREAIEKAN-GMEKLDAILACMHEHGSLEYTQQRAEEEAEKAIAALAPI 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 DS +K++L+ + +QR Sbjct: 303 ADSEYKEALVALAHMSVQR 321 >gi|325925951|ref|ZP_08187318.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans 91-118] gi|325543616|gb|EGD15032.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans 91-118] Length = 332 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 117/252 (46%), Positives = 157/252 (62%), Gaps = 2/252 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMTAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI- 239 +L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I Sbjct: 193 ALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGKNLGDDLAEGKATLPLIH 252 Query: 240 -LAFQRGTKREK 250 +A T RE+ Sbjct: 253 AMAHSDATTRER 264 >gi|332967870|gb|EGK06966.1| octaprenyl-diphosphate synthase [Kingella kingae ATCC 23330] Length = 324 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 121/296 (40%), Positives = 181/296 (61%), Gaps = 2/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 SDV +I + Y+I +GGKRLRP+LT+ + L Y D LA +EFIHT+TLLHDDV Sbjct: 29 SDVALISQIGTYIIGAGGKRLRPILTILSGKCLGYDDDKLYSLAAMVEFIHTSTLLHDDV 88 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S + LE ++ +AEGE Sbjct: 89 VDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVGSGSLKILEVMADATNIIAEGE 148 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + QL N+D+TE YL VI+ KTA LF AA +V +++AG QALK +GM++G A Sbjct: 149 VMQLMNIGNVDITEAQYLQVIQYKTAKLFEAAAQVGAILAGATAEQEQALKDFGMHMGTA 208 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ++DDVLDY G V ++GKN+G+D GKPTLP+I QRG + + ++ + + Sbjct: 209 FQIIDDVLDYSGSVEQIGKNVGDDLAEGKPTLPLIYLMQRGNVQAASDVRAALQNA--DR 266 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + K + ++ AL +A A D L LP + ++ ++ + + R Sbjct: 267 DYFDKIHAHVTQSDALAYCIEQAKVAVDNAIDCLNALPQNEVTAAMRQMAELSVAR 322 >gi|325918710|ref|ZP_08180807.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325918918|ref|ZP_08180989.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325534852|gb|EGD06777.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325535077|gb|EGD06976.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC 35937] Length = 332 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 115/260 (44%), Positives = 158/260 (60%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I Sbjct: 193 ALASGADADVQQRLYDYGMQLGFAFQIADDVLDYAAEAEDLGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDG 260 A + + ++ + G Sbjct: 253 AMAHSDEATRQRLRAIVEQG 272 >gi|77919579|ref|YP_357394.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380] gi|77545662|gb|ABA89224.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380] Length = 322 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 124/322 (38%), Positives = 196/322 (60%), Gaps = 4/322 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M++ + L +D++ + + + SDV +I + Y++ SGGKR+RP+L L A + Y Sbjct: 1 MQLAQTLLKEDLQHIESCFRQYLTSDVPLIRQMSDYILASGGKRIRPVLLLLCARLSGYN 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ LA IEFIHTATLLHDDVVD + LRRG+VAA + WGN +VLVGD+L ++ F M Sbjct: 61 GEHRYPLASVIEFIHTATLLHDDVVDGATLRRGQVAANVTWGNDIAVLVGDYLFARCFEM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ + ++ L+ +A+GE+ QL S +L + EE YL V++SKTA LFSA + Sbjct: 121 MVDFCDRRIMQVLANTTSLMAQGEVVQLINSGDLSLDEERYLSVVRSKTAALFSATCRCA 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + + L +GM+LG+AFQLVDD LDY + NE GK +G D GK TLP+I Sbjct: 181 AILGQLSAEKEEDLAGFGMHLGVAFQLVDDALDYVADQNESGKLLGRDLAEGKMTLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR--ALVDTEYRAYSYGQKAKDSL 298 + + E+ + G++ E+L AF+ NR + T+ +A SY ++A L Sbjct: 241 SLRHCQGEERQQVSGILAKGQLHAEDL--AFVQNLINRYDGIGYTQRQADSYVKQACLRL 298 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 + PDS +++L+E+ + + R Sbjct: 299 QGFPDSPARQALVELAESAVHR 320 >gi|21232167|ref|NP_638084.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767704|ref|YP_242466.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|188990821|ref|YP_001902831.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris pv. campestris str. B100] gi|21113920|gb|AAM42008.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573036|gb|AAY48446.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|167732581|emb|CAP50775.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris pv. campestris] Length = 332 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 127/322 (39%), Positives = 181/322 (56%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I Sbjct: 193 ALASGADAQVQQCLYDYGMQLGFAFQIADDVLDYAADATDLGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G E + + +R L + RA Y A+ +L Sbjct: 253 AIAHSDAATQQRLRQIVEQGD--AEAMPEVLTAIRATGGLDYSRQRAAEYAAAAEQALDG 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 311 LPPSPAVAALRGLARYAVERTH 332 >gi|260220330|emb|CBA27759.1| hypothetical protein Csp_A03890 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 524 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 114/255 (44%), Positives = 165/255 (64%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM +V+ +I +R+ S V ++ V +Y+I +GGKRLRP L L L Y+G+ +A Sbjct: 17 PDMREVDRVIAQRLDSGVPLVGSVSQYIISAGGKRLRPALLLLCCGALGYKGEQRFNMAA 76 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVDDS LRRG A +GN SVLVGDFL S+AF M+++ +S Sbjct: 77 VVEFIHTATLLHDDVVDDSDLRRGAPTANARFGNPASVLVGDFLYSRAFQMMVDAQSMRI 136 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL N + E YL VI+SKTA LF A+ V ++++ + Sbjct: 137 MQVLADATNIISEGEVMQLMNMHNAALDEAGYLQVIRSKTAKLFEASARVGAILSQASET 196 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +A +G +G AFQ++DDVLDY G+ MGKN+G+D R GK TLP+I A QRGT+ E Sbjct: 197 HEEACAEFGQAMGTAFQVIDDVLDYAGDATVMGKNLGDDLREGKTTLPLIAAMQRGTESE 256 Query: 250 KNFWKSTINDGKISV 264 ++ ++ I G +++ Sbjct: 257 RSTIQTAIETGDLTM 271 >gi|254523411|ref|ZP_05135466.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14] gi|219721002|gb|EED39527.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14] Length = 332 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 113/247 (45%), Positives = 157/247 (63%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 LI +R+ SDV +I + ++I +GGKRLRPML + + + G +H LA IEFIHT+ Sbjct: 30 LIRRRLSSDVVLINQIADHIISAGGKRLRPMLVMLAGHAVGHAGPDHHQLAAIIEFIHTS 89 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +++E + ++ L+ Sbjct: 90 TLLHDDVVDESNLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVELERMPVMQILADAT 149 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 +AEGE+ QL N D E YL VI+ KTAVLF+A + +L +GV + +QAL Y Sbjct: 150 NRIAEGEVLQLLHVHNPDTDETAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDY 209 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 GM+LG AFQ+ DDVLDY +E+GKN+G+D GK TLP+I A + ++ + Sbjct: 210 GMHLGYAFQIADDVLDYSANADELGKNLGDDLAEGKATLPLIHAMAHSDDATRERLRAIV 269 Query: 258 NDGKISV 264 DG S Sbjct: 270 QDGDASA 276 >gi|289664594|ref|ZP_06486175.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667160|ref|ZP_06488235.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 332 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 117/252 (46%), Positives = 157/252 (62%), Gaps = 2/252 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI- 239 +L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I Sbjct: 193 ALASGATVEVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGKNLGDDLAEGKATLPLIH 252 Query: 240 -LAFQRGTKREK 250 +A T RE+ Sbjct: 253 AMAHSDATTRER 264 >gi|87122767|ref|ZP_01078640.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121] gi|86161932|gb|EAQ63224.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121] Length = 327 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 129/314 (41%), Positives = 180/314 (57%), Gaps = 9/314 (2%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGDNHVLLA 68 VN IL ++ S++ +I + Y+I +GGKRLRP+L L A Y+ DN V +A Sbjct: 17 VNDHILSQLKSEIPLIEQIGYYIISNGGKRLRPLLVLMAARACGNADASNYQ-DNMVKMA 75 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IEFIHTATLLHDDVVD+S +RRGK A WGN SVLVGDFL S+AF +++E S + Sbjct: 76 TIIEFIHTATLLHDDVVDESDMRRGKKTANEEWGNAPSVLVGDFLYSRAFQIMVEVGSMQ 135 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ L+ ++EGE++QL + +EE YL VI+ KTA LF A +++A Sbjct: 136 CMQILAETTNIISEGEVQQLINCGDPSTSEESYLKVIQYKTAKLFEGAALCGAIVANANK 195 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +QAL YG +G AFQL+DDV+DY EMGKN+G+D GKPTLP+I + Sbjct: 196 EQQQALADYGTYVGTAFQLIDDVMDYTSTAEEMGKNVGDDLAEGKPTLPLIYTMKHAPTE 255 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + I G +E L ++ A+ TE A Q A D L LPDS +K Sbjct: 256 AAQRVRQAIETG--GLEQLDTIIADVQACGAIEYTEKAAQEQAQLAIDVLAPLPDSVYKT 313 Query: 309 SLMEVVDFCLQRLN 322 +L+++ + + R N Sbjct: 314 ALIDLANASVNRRN 327 >gi|88704338|ref|ZP_01102052.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71] gi|88701389|gb|EAQ98494.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71] Length = 320 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 195/320 (60%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + + K+++ VN +I++++ SDVEM+ +V +Y++ +GGKRLRP+L L ++ L Sbjct: 1 MQEVRAVVSKELDAVNAVIIEQLRSDVEMVENVGQYIVDAGGKRLRPVLVLLSSAALGSI 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + + A +EFIHTATLLHDDVVD S LRRG+ A +GN +SVLVGDFL ++AF + Sbjct: 61 SELQIRFAAVVEFIHTATLLHDDVVDVSELRRGRPTANSAFGNASSVLVGDFLYTRAFQL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + L+ ++ T+A GE+ QL + + +E+ Y VI KTA LF+A + + Sbjct: 121 MVTLGNHDVLKMMADTTNTIAAGEVLQLIRAGDSSTSEDQYYDVIDRKTAALFAAGCQGA 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+AG + + L YG N+GIAFQ+VDD+LDY+G+ GKN+G+D GKPTLP+I Sbjct: 181 ALLAGADSGNVRDLNIYGRNVGIAFQIVDDLLDYQGDPEVTGKNVGDDLAEGKPTLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G+ + + IN E L +++ +L T A S KA +L+ Sbjct: 241 VMREGSNAQATLVREAIN--AKDRERLPDIIQAVKDCGSLEYTREAAVSCRDKALGALKG 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P+S KK+++ + L+R Sbjct: 299 FPESPAKKAMINLAALSLER 318 >gi|294339015|emb|CAZ87362.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Thiomonas sp. 3As] Length = 336 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 123/315 (39%), Positives = 188/315 (59%), Gaps = 10/315 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DME+V+ I + S+V +I + Y++ GGKRLRP L L + L +RG ++A Sbjct: 26 EDMERVDRAIHTHLASEVALINTIGGYIVAGGGKRLRPALLLLVSQALGFRGPQQHIMAA 85 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IHTATLLHDDVVD+S++RRG+ + ++GN SVLVGDFL S+AF M++ S Sbjct: 86 VVELIHTATLLHDDVVDESSMRRGRETSNALFGNSASVLVGDFLYSRAFQMMVSVGSMRI 145 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ +AEGE+ QL + +V E+ YL VI+ KTA LF AA + +++A + Sbjct: 146 LDILADATNVIAEGEVLQLLNMHDPEVDEQRYLQVIRFKTAKLFEAAARIGAVLADADAN 205 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++ + G + G AFQL+DD+LDY G E+GKNIG+D R GKPTLP+I+A ++GT + Sbjct: 206 TQEEMALAGRSFGTAFQLIDDLLDYSGNSAELGKNIGDDLREGKPTLPLIIAMRQGTAAQ 265 Query: 250 KNFWKSTINDGKIS----VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + ++ I G S V ++ A M+ R E R A+ +L L S Sbjct: 266 RTLIENAIRQGDTSALDDVMDIVHACGAMQAVRKAAQGEIRV------AECALSPLAPSP 319 Query: 306 WKKSLMEVVDFCLQR 320 +++L+++ + L R Sbjct: 320 ARQALLDLCAYSLGR 334 >gi|325919582|ref|ZP_08181594.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC 19865] gi|325549918|gb|EGD20760.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC 19865] Length = 358 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 115/252 (45%), Positives = 157/252 (62%), Gaps = 2/252 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 39 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 98 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA +EFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 99 GPEHHQLAAIVEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 158 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 159 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 218 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI- 239 +L +G V+Q L YGM LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I Sbjct: 219 ALASGADAHVQQRLYDYGMQLGFAFQIADDVLDYAADATDLGKNLGDDLAEGKATLPLIH 278 Query: 240 -LAFQRGTKREK 250 +A T RE+ Sbjct: 279 AMAHSDATTRER 290 >gi|296134998|ref|YP_003642240.1| Polyprenyl synthetase [Thiomonas intermedia K12] gi|295795120|gb|ADG29910.1| Polyprenyl synthetase [Thiomonas intermedia K12] Length = 326 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 123/315 (39%), Positives = 186/315 (59%), Gaps = 10/315 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DME V+ I + S+V +I + Y++ GGKRLRP L L + L +RG ++A Sbjct: 16 EDMESVDRAIHTHLASEVALINTIGGYIVAGGGKRLRPALLLLVSQALGFRGPQQHIMAA 75 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IHTATLLHDDVVD+S++RRG+ + ++GN SVLVGDFL S+AF M++ S Sbjct: 76 VVELIHTATLLHDDVVDESSMRRGRETSNALFGNSASVLVGDFLYSRAFQMMVSVGSMRI 135 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L L+ +AEGE+ QL + +V E+ YL VI+ KTA LF AA + +++A + Sbjct: 136 LNILADATNVIAEGEVLQLLNMHDPEVDEQRYLQVIRFKTAKLFEAAARIGAVLADADAN 195 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++ + G + G AFQL+DD+LDY G E+GKNIG+D R GKPTLP+I+A ++GT + Sbjct: 196 TQEEMALAGRSFGTAFQLIDDLLDYSGNSAELGKNIGDDLREGKPTLPLIIAMRQGTAAQ 255 Query: 250 KNFWKSTINDGKIS----VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + ++ I G S V ++ A M+ R E R A+ +L L S Sbjct: 256 RTLIENAIRQGDTSALDDVMDIVHACGAMQAVRKAAQGEIRV------AERALSPLAPSP 309 Query: 306 WKKSLMEVVDFCLQR 320 +++L+++ + L R Sbjct: 310 ARQALLDLCAYSLGR 324 >gi|238022826|ref|ZP_04603252.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147] gi|237866029|gb|EEP67165.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147] Length = 324 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 121/311 (38%), Positives = 190/311 (61%), Gaps = 2/311 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ +VN +I + + S+V +I + Y+I +GGKRLRP+LT+ L D LA Sbjct: 15 DLSRVNVVINRAVQSEVALISQIGTYIISAGGKRLRPILTILAGKCLGCDSDKLYSLAAM 74 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S + L Sbjct: 75 VEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVGSGSLKIL 134 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E ++ +AEGE+ QL N +++E +YL VI+ KTA LF AA +V +++AG + Sbjct: 135 EVMAEATNIIAEGEVMQLMNIGNTEISETEYLQVIQYKTAKLFEAAAQVGAILAGATSGQ 194 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 QALK YG ++G AFQ++DDVLDY G V ++GKN+G+D GKPTLP+I ++G++ Sbjct: 195 EQALKDYGAHIGTAFQIIDDVLDYSGSVEQIGKNVGDDLAEGKPTLPLIYLMRQGSEEAA 254 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + S ++ ++ AL +A KA +L+ LP++ ++ Sbjct: 255 RDVRHALQHADRSYFETIHNHVM--QSGALDYCVQQARHAADKAILALQMLPENEVTHAM 312 Query: 311 MEVVDFCLQRL 321 E+ + L R+ Sbjct: 313 RELAEQSLSRI 323 >gi|190570943|ref|YP_001975301.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019458|ref|ZP_03335264.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357215|emb|CAQ54632.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994880|gb|EEB55522.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 328 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 112/318 (35%), Positives = 191/318 (60%), Gaps = 4/318 (1%) Query: 4 LEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L+D+ D+ +N I K + + ++ D+ +LI SGGK++RP L ML Y G+ Sbjct: 12 LDDIVSSDLLAMNDFIFKNVNDEGTKLATDITSHLINSGGKKIRPKLIFIMCKMLNYSGE 71 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + V +A ++EFIH ATLLHDDV+D+S R G A +WGN++S+LVGD LL+ AF +I Sbjct: 72 SRVNIAASVEFIHNATLLHDDVLDESKARHGVATANKIWGNKSSILVGDLLLTLAFRWLI 131 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E + L LS + L +GE++Q++ + + ++Y ++I KTA LFSA E +S+ Sbjct: 132 ECGNLSVLSILSKASNLLVKGEIKQMTTRFDPNTIRKNYFNIIGEKTASLFSACSEAASV 191 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++G + + L+++G N G+AFQ++DDVLDY +GK +G+DF GK TLP I+A+ Sbjct: 192 VSGATSDETERLRNFGFNFGMAFQIIDDVLDYTANQCTLGKQLGKDFFEGKVTLPSIIAY 251 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 ++G+ E+ FW+ + + + N +A + + A+ + A Y A+ ++ Sbjct: 252 EKGSPSEQKFWEKSFSSAR---HNFDQALQYINHHNAIHVSMEEAKHYINMAQSNIDTFS 308 Query: 303 DSSWKKSLMEVVDFCLQR 320 DS +K +L++ ++ ++R Sbjct: 309 DSLYKTALIDFLNASIER 326 >gi|190573198|ref|YP_001971043.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas maltophilia K279a] gi|190011120|emb|CAQ44729.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas maltophilia K279a] Length = 332 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 113/247 (45%), Positives = 155/247 (62%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 LI +R+ SDV +I + ++I +GGKRLRPML + + G H LA IEFIHT+ Sbjct: 30 LIRRRLSSDVVLINQIADHIISAGGKRLRPMLVMLAGHAVGQAGPEHHQLAAIIEFIHTS 89 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TLLHDDVVD+S+LRRG+ A +WGN SVLVGDFL S++F +++E + ++ L+ Sbjct: 90 TLLHDDVVDESSLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVELERMPVMQILADAT 149 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 +AEGE+ QL N D E YL VI+ KTAVLF+A + +L +GV + +QAL Y Sbjct: 150 NRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDY 209 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 GM+LG AFQ+ DDVLDY E+GKN+G+D GK TLP+I A + ++ + Sbjct: 210 GMHLGYAFQIADDVLDYSANAEELGKNLGDDLAEGKATLPLIHAMAHSDDATRERLRTIV 269 Query: 258 NDGKISV 264 DG S Sbjct: 270 QDGDASA 276 >gi|237749261|ref|ZP_04579741.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13] gi|229380623|gb|EEO30714.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13] Length = 329 Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 133/315 (42%), Positives = 189/315 (60%), Gaps = 12/315 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DME VN +I +++ S+V I + +YLI +GGKR+RP L L A Y+G H +LA Sbjct: 20 DMEGVNRIIREQLHSNVPFISQIAEYLINAGGKRIRPALVLLMARAFGYQGTQHQMLAAM 79 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTATLLHDDVVD++ LRRGK +A ++GN SVLVGDFL ++AF M++ L Sbjct: 80 IEFIHTATLLHDDVVDEADLRRGKSSANALFGNAASVLVGDFLYTRAFQMIVAVNDMRIL 139 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS +AEGE+ QL +N + E+ Y+ VI +KTA LF + + +LIA Sbjct: 140 PVLSDATNLIAEGEVMQLVNVRNPAIDEKRYMEVIYAKTARLFEVSAVLGALIAHASEKE 199 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A +YG +LGIAFQLVDD+LDY GE + +GK +G D R GK TLP+I + Sbjct: 200 IEAAAAYGRSLGIAFQLVDDLLDYAGETDVLGKTVGNDLREGKMTLPLIFLMSHCDES-- 257 Query: 251 NFWKSTINDGKISVENLKKA---FII--MRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + TI + +EN +A FI+ ++ + AL T +A A +L CL DS Sbjct: 258 --IRKTIRE---CIENHDEASLPFILEAVKASDALDYTARKAQDAANDAAQALSCLRDSQ 312 Query: 306 WKKSLMEVVDFCLQR 320 +K++L+++ F +R Sbjct: 313 YKETLIKLSTFSAER 327 >gi|126642763|ref|YP_001085747.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978] gi|126388647|gb|ABO13145.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978] Length = 325 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 121/313 (38%), Positives = 186/313 (59%), Gaps = 4/313 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLAC 69 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A + N LA Sbjct: 16 DFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACDLDNMQNAQRLAA 75 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 76 IIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNNMTL 135 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E ++++AG Q + Sbjct: 136 LKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAG-QEA 194 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T E Sbjct: 195 YREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHSTGEE 254 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + +I G V+ L K I++++ AL + RA + A +L LPD+ ++++ Sbjct: 255 HAIIRRSIATG--GVDQLPKVIEIVQKSGALDYCQRRAQEETEAALQALSILPDTPYRQA 312 Query: 310 LMEVVDFCLQRLN 322 L+ + L R+ Sbjct: 313 LINLTRLALHRIQ 325 >gi|83648584|ref|YP_437019.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC 2396] gi|83636627|gb|ABC32594.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC 2396] Length = 322 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 128/311 (41%), Positives = 189/311 (60%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D V+ LI ++ S+V ++ + +Y+I SGGKRLRP+L L + L +++ LA Sbjct: 12 EDFLSVDGLIKNQLFSNVPLVEKIGQYIIDSGGKRLRPLLVLLVSNALNATEKHYLKLAA 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEF+HTATLLHDDVVD S LRRG+ A WGN SVLVGDFL S+AF M++E + + Sbjct: 72 IIEFLHTATLLHDDVVDTSDLRRGRDTANAKWGNAPSVLVGDFLYSRAFQMMVELRDMDV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + L+ +AEGE+ QL+ KN D+TE Y+ VI +KTA+LF AA ++++ Sbjct: 132 MSVLANATNVIAEGEVLQLTNCKNPDITEAQYMEVITAKTAMLFEAASHSAAILCQASAE 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +K +G+ LGIAFQL+DDVLDY+G EMGKN+G+D GKPTLP++ A Q+G + + Sbjct: 192 TTSDMKEFGLELGIAFQLIDDVLDYQGNAAEMGKNVGDDLAEGKPTLPLLYAQQQGDEAQ 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + I +G +E L +R++ AL T A Y +A L L S ++ + Sbjct: 252 RKLIRKAIREG--GLEQLDAVMSAVRKSGALNYTIELAKEYATRAAARLERLAPSVYRDA 309 Query: 310 LMEVVDFCLQR 320 L + + + R Sbjct: 310 LFALTEIAVNR 320 >gi|285017833|ref|YP_003375544.1| octaprenyl-diphosphate synthase [Xanthomonas albilineans GPE PC73] gi|283473051|emb|CBA15556.1| putative octaprenyl-diphosphate synthase protein [Xanthomonas albilineans] Length = 331 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 125/311 (40%), Positives = 180/311 (57%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM V+ LI R+ SDV +I + ++I +GGKRLRPML + G H LA Sbjct: 21 PDMAAVDALIRHRLASDVVLINQIADHIISAGGKRLRPMLVMLAGRACGSHGPKHHQLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +++E S Sbjct: 81 IIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVELDSMAV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + +L AG ++ Sbjct: 141 MRLLADTTNRIAEGEVLQLLHVHNPDTDEAAYLQVIERKTAVLFAAGTRLGALAAGATDA 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V+Q L +YGM+LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I A Sbjct: 201 VQQCLYAYGMHLGYAFQIADDVLDYTADAADLGKNLGDDLAEGKATLPLIHAIAHADAST 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + + G + + + ++ + L + RA Y A+ +L LPD+ + Sbjct: 261 RARLRQIVEHGD--ADAMPEVLTAIQASGGLDYSRRRAAEYAAAAERALDSLPDNDAVAA 318 Query: 310 LMEVVDFCLQR 320 L + + ++R Sbjct: 319 LRGLARYAVER 329 >gi|206890930|ref|YP_002249297.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742868|gb|ACI21925.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 322 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 121/312 (38%), Positives = 189/312 (60%), Gaps = 5/312 (1%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L+++EK I K SD +IP + Y+I SGGKRLRP+ L +A + YR V++A Sbjct: 14 LREVEKELINIFK---SDATLIPTIGAYIINSGGKRLRPLFLLISADLAGYREYKRVIMA 70 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IE +HTA+LLHDDVVD++ LRRG+V+A +WGNQ +VL+GD+L ++A + + +S + Sbjct: 71 AVIEALHTASLLHDDVVDEAELRRGQVSANRIWGNQVTVLLGDYLYAKALHVSVAQESLQ 130 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +EALS +AEGE+ QL + + +T +Y+ +I KTA L AA ++ ++A + Sbjct: 131 IMEALSWATSQMAEGEILQLMKAGDPTITFNEYIKIITGKTAGLIRAACRIAGILAKLSE 190 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 QAL +G N+G+AFQ++DD+LDY + +E+GK +G+D GK TLP+I ++ + Sbjct: 191 EKIQALTDFGHNIGVAFQMIDDILDYVADESELGKKLGKDLMEGKITLPLIELIKKTQGK 250 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E+ +TI S ENL K +R+ + + +Y KAK +L PDS ++ Sbjct: 251 EEII--NTIKSDGFSEENLLKILNYLRQYNCIESSMEIVKNYVDKAKKALEIFPDSDARQ 308 Query: 309 SLMEVVDFCLQR 320 L + D+ L R Sbjct: 309 RLFRIADYILLR 320 >gi|194364794|ref|YP_002027404.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3] gi|194347598|gb|ACF50721.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3] Length = 332 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 113/246 (45%), Positives = 155/246 (63%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 LI +R+ SDV +I + ++I +GGKRLRPML + + G H LA IEFIHT+ Sbjct: 30 LIRRRLSSDVVLINQIADHIISAGGKRLRPMLVMLAGRAVGNVGPEHHQLAAIIEFIHTS 89 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TLLHDDVVD+S+LRRG+ A +WGN SVLVGDFL S++F +++E + ++ L+ Sbjct: 90 TLLHDDVVDESSLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVELERMSVMQILADAT 149 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 +AEGE+ QL N D E YL VI+ KTAVLF+A + +L +GV + +QAL Y Sbjct: 150 NRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDY 209 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 GM+LG AFQ+ DDVLDY E+GKN+G+D GK TLP+I A + ++ + Sbjct: 210 GMHLGYAFQIADDVLDYSANAEELGKNLGDDLAEGKATLPLIHAMAHSNDATRERLRTIV 269 Query: 258 NDGKIS 263 DG S Sbjct: 270 QDGDAS 275 >gi|212213122|ref|YP_002304058.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212] gi|212011532|gb|ACJ18913.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212] Length = 332 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 124/321 (38%), Positives = 192/321 (59%), Gaps = 3/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L D+E V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y Sbjct: 12 IESLRQLVQNDIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYE 71 Query: 61 GD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 D H LA IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF Sbjct: 72 QDVEHQELATVIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQ 131 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+ Sbjct: 132 ILARRSNVPIMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEI 191 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++A + ++++ ++G++LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I Sbjct: 192 GAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLI 251 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + I +G + ++L+ +M E RA T+ A +KA L+ Sbjct: 252 YAKQQAQPAQAEHIREAIKNGDL--DDLQSIMKLMDETRAREYTQQCALKQAEKAHTYLQ 309 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + F + R Sbjct: 310 QLPPSPYRDALNALTQFVVSR 330 >gi|293610928|ref|ZP_06693227.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826580|gb|EFF84946.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123244|gb|ADY82767.1| octaprenyl-diphosphate synthase [Acinetobacter calcoaceticus PHEA-2] Length = 325 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 123/313 (39%), Positives = 188/313 (60%), Gaps = 6/313 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLA 68 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A A L+ N LA Sbjct: 16 DFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDNMA-NAQRLA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 75 AIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNNMT 134 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E ++++AG Q Sbjct: 135 LLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAG-QE 193 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A R T Sbjct: 194 AYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALARSTGE 253 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E + +I G V+ L + I++++ AL RA + A +L LPD+ +++ Sbjct: 254 EHAIIRRSIATG--GVDQLSQVIEIVQKSGALDYCNQRAQEETEAALQALSNLPDTPYRQ 311 Query: 309 SLMEVVDFCLQRL 321 +L+ + L R+ Sbjct: 312 ALINLTQLALHRI 324 >gi|165918704|ref|ZP_02218790.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334] gi|165917639|gb|EDR36243.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334] Length = 332 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 122/311 (39%), Positives = 189/311 (60%), Gaps = 3/311 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLLAC 69 D+E V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y D H LA Sbjct: 22 DIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYEQDVEHQELAT 81 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF ++ + Sbjct: 82 VIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQILARRSNVPI 141 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+ +++A + Sbjct: 142 MKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNET 201 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++++ ++G++LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I A Q+ + Sbjct: 202 WQKSMAAFGLHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLIYAKQQAQPAQ 261 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I +G + ++L+ +M E RA T+ A + +KA L+ LP S ++ + Sbjct: 262 AEHIREAIKNGDL--DDLQSIMKLMDETRAREYTQQCALTQAEKAHTYLQQLPPSPYRDA 319 Query: 310 LMEVVDFCLQR 320 L + F + R Sbjct: 320 LNALTQFVVSR 330 >gi|120612320|ref|YP_971998.1| trans-hexaprenyltranstransferase [Acidovorax citrulli AAC00-1] gi|120590784|gb|ABM34224.1| Trans-hexaprenyltranstransferase [Acidovorax citrulli AAC00-1] Length = 344 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 130/314 (41%), Positives = 192/314 (61%), Gaps = 2/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +V+ +I R+ S V +I ++ +Y+I +GGKRLRP L L + L Y+ Sbjct: 31 LIADDMHEVDKVIGLRLQSSVPLIGEIARYIISAGGKRLRPALLLLMSGALGYQEAQRFN 90 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IEFIHTATLLHDDVVD+S +RRG+ A +GN SVLVGDFL S+AF M+++ Sbjct: 91 LAAVIEFIHTATLLHDDVVDESTMRRGRPTANENFGNPASVLVGDFLHSRAFQMMVDADD 150 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ LS +AEGE++QL + + + E+ YL VI+SKTA LF A+ +++++A Sbjct: 151 MRVMQILSEATNIIAEGEVQQLMNTHDATLDEQGYLEVIRSKTAKLFEASARLAAVLARA 210 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ +A YG LG AFQ++DDVLDY G EMGKN+G+D R GK TLP+I+A QRG Sbjct: 211 PAAIEEACAEYGKALGTAFQVIDDVLDYDGNSAEMGKNLGDDLREGKVTLPLIIAMQRGD 270 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ ++ I G S++ L I++ AL T A + Q+A +L LP + + Sbjct: 271 AAQRQLIETAIQQG--SLDELPAILAIVKATGALEATRAAAAAQAQEAIRALSALPSNKY 328 Query: 307 KKSLMEVVDFCLQR 320 + L+++ L R Sbjct: 329 TEGLLQLASQLLDR 342 >gi|169632597|ref|YP_001706333.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter baumannii SDF] gi|169794921|ref|YP_001712714.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter baumannii AYE] gi|184159304|ref|YP_001847643.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii ACICU] gi|213157674|ref|YP_002320472.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057] gi|215482467|ref|YP_002324653.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294] gi|239502311|ref|ZP_04661621.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB900] gi|260557286|ref|ZP_05829502.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606] gi|301344906|ref|ZP_07225647.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB056] gi|301511077|ref|ZP_07236314.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB058] gi|301595152|ref|ZP_07240160.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB059] gi|332854208|ref|ZP_08435228.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6013150] gi|332866350|ref|ZP_08436955.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6013113] gi|332872565|ref|ZP_08440534.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6014059] gi|169147848|emb|CAM85711.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter baumannii AYE] gi|169151389|emb|CAP00114.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter baumannii] gi|183210898|gb|ACC58296.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii ACICU] gi|213056834|gb|ACJ41736.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057] gi|213986828|gb|ACJ57127.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294] gi|260409392|gb|EEX02694.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606] gi|322509215|gb|ADX04669.1| ispB [Acinetobacter baumannii 1656-2] gi|323519244|gb|ADX93625.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii TCDC-AB0715] gi|332728133|gb|EGJ59521.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6013150] gi|332734698|gb|EGJ65802.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6013113] gi|332739251|gb|EGJ70109.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6014059] Length = 325 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 123/314 (39%), Positives = 188/314 (59%), Gaps = 6/314 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLA 68 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A A L+ N LA Sbjct: 16 DFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDNM-QNAQRLA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 75 AIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNNMT 134 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E ++++AG Q Sbjct: 135 LLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAG-QE 193 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T Sbjct: 194 AYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHSTGE 253 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E + +I G V+ L K I++++ AL + RA + A +L LPD+ +++ Sbjct: 254 EHAIIRRSIATG--GVDQLPKVIEIVQKSGALDYCQRRAQEETEAALQALSILPDTPYRQ 311 Query: 309 SLMEVVDFCLQRLN 322 +L+ + L R+ Sbjct: 312 ALINLTRLALHRIQ 325 >gi|329905263|ref|ZP_08274077.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae bacterium IMCC9480] gi|327547655|gb|EGF32446.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae bacterium IMCC9480] Length = 243 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 150/225 (66%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME VN +I +++ S+V ++ + +Y+I +GGKR+RP L L A Y G +H LA Sbjct: 19 SDMEAVNLVIRRQLHSEVALVNQIAEYIISAGGKRIRPALVLLMARAFGYNGTHHHDLAA 78 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S+LRRG+ A ++GN SVLVGDF+ S+AF M++ Sbjct: 79 VVEFIHTATLLHDDVVDESSLRRGRQTANALFGNAASVLVGDFVYSRAFQMMVSVDDMRV 138 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + LS +AEGE+ QL + DVTE YL VI+SKTA LF AA ++ +L+AG Sbjct: 139 MRILSDATNVIAEGEVLQLLNMHDPDVTEARYLQVIRSKTAKLFEAAAQLGALVAGASAE 198 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 +A YG +LG AFQL+DDVLDY G +++GKN+G+D R GKP Sbjct: 199 DVEAAAEYGRSLGTAFQLIDDVLDYSGNASDIGKNVGDDLREGKP 243 >gi|153207271|ref|ZP_01946035.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212218206|ref|YP_002304993.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154] gi|120576759|gb|EAX33383.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012468|gb|ACJ19848.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154] Length = 332 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 122/311 (39%), Positives = 189/311 (60%), Gaps = 3/311 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLLAC 69 D+E V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y D H LA Sbjct: 22 DIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYEQDVEHQELAT 81 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF ++ + Sbjct: 82 VIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQILARRSNVPI 141 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+ +++A + Sbjct: 142 MKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNET 201 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++++ ++G++LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I A Q+ + Sbjct: 202 WQKSMAAFGLHLGMAYQIIDDLLDYSKDASPLDKNVGDDLAEGKATLPLIYAKQQAQPAQ 261 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I +G + ++L+ +M E RA T+ A + +KA L+ LP S ++ + Sbjct: 262 AAHIREAIKNGDL--DDLQSIMKLMDETRAREYTQQCALTQAEKAHTYLQQLPPSPYRDA 319 Query: 310 LMEVVDFCLQR 320 L + F + R Sbjct: 320 LNALTQFVVSR 330 >gi|148284169|ref|YP_001248259.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Boryong] gi|146739608|emb|CAM79381.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Boryong] Length = 338 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 119/316 (37%), Positives = 192/316 (60%), Gaps = 4/316 (1%) Query: 10 KDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 KDM +VN +IL I S E +I +V Y +GGKR+RPMLT+ + + Y G +H LA Sbjct: 22 KDMSEVNNVILNCISSSQEQLIYEVGTYFFNAGGKRIRPMLTIIISKLFNYHGLSHYYLA 81 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH+ATLLHDDVVD+S +RR L W +TS+L+GDFL SQ+F ++I++ S Sbjct: 82 AAVELIHSATLLHDDVVDESKMRRSHPTVHLKWDTKTSILIGDFLFSQSFKLMIKSNSIR 141 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 AL++ SL T+ GE++QL+ N +TE++Y VI++KTA LF + E++++I+ Sbjct: 142 ALKSFSLSFNTIITGEVKQLTQLHNQKIITEDEYFRVIQAKTAELFGTSCEIAAIISNQS 201 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ-RGT 246 +K++G+ LG+ FQ+VDD+LDY G + +GKN+G+DF GK TLP+I+A+ + Sbjct: 202 APTCLLVKTFGIKLGLIFQIVDDILDYFGNSDSLGKNVGDDFMEGKVTLPIIMAYNCASS 261 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-S 305 + E++FW + + ++ K A ++ + L + + Q+ D + L S Sbjct: 262 QNERDFWHRIFLNREQKEDDFKHALSLLYTHNVLALIKQKISQLEQQVYDIITKLNISLE 321 Query: 306 WKKSLMEVVDFCLQRL 321 +K L + + + R+ Sbjct: 322 YKNYLENLTKYIINRI 337 >gi|258544867|ref|ZP_05705101.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC 15826] gi|258519890|gb|EEV88749.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC 15826] Length = 326 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 122/317 (38%), Positives = 187/317 (58%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + L +DM+ L+ + S+V + V++Y I GGKR RP+LTL + + +YRG++ Sbjct: 10 IRQLVQQDMQATEALMRAEMQSEVPLAELVMQYAIGDGGKRFRPLLTLLSCGLCDYRGEH 69 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A IEFIH ATLLHDDVVD+SALRRGK +A + +GN SVLVGDFL ++AF +++ Sbjct: 70 AITAAAFIEFIHNATLLHDDVVDESALRRGKPSANIAFGNAASVLVGDFLYTRAFQLMVR 129 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 T + + ++ +A GE+ QL + DV E Y VI+ KTAVLF+AA + + L+ Sbjct: 130 TGNSAVIAMMADAVNLIAAGEVMQLGNMHDPDVDEPRYYRVIELKTAVLFAAACKTAGLL 189 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG+ + + L YG LG+AFQ++DD+LDY G+ +GK++G+D GKPTLP+I A Q Sbjct: 190 AGLPEARSEQLAVYGRKLGMAFQIMDDLLDYTGDEALIGKSLGDDLAEGKPTLPLIRAQQ 249 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + K + I G E + + +++ AL + A +A +L PD Sbjct: 250 QLPAAGKQRLRDIIEAG--DREAIGEVIALLQATDALPYSRQAAERLAHEAVQALTAFPD 307 Query: 304 SSWKKSLMEVVDFCLQR 320 S++K +L + +R Sbjct: 308 SAYKDALFSLAQRTTER 324 >gi|329118546|ref|ZP_08247250.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC BAA-1200] gi|327465281|gb|EGF11562.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC BAA-1200] Length = 324 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 113/251 (45%), Positives = 165/251 (65%), Gaps = 6/251 (2%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L D+ +VN ++ + + S+V +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQKNLATDLGRVNQVVGRAVQSEVALISQIGSYIIGAGGKRLRPIITILAGKS 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 L Y GD LA +EFIHT+TLLHDDVVD+S +RRG+ A ++GN +VLVGDFL ++ Sbjct: 61 LGYDGDPLYSLAAMVEFIHTSTLLHDDVVDESDMRRGRETANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S + LE ++ +AEGE+ QL N D++E +YL VI+ KTA LF AA Sbjct: 121 AFQLMVGSGSMKILEVMADATNIIAEGEVMQLMNIGNTDISETEYLRVIQYKTAKLFEAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++AG AL+ YGM +G AFQ+VDD+LDY G+ E+GKN+G+D GKPTL Sbjct: 181 AQVGAILAGASAEQEAALRDYGMYVGTAFQIVDDILDYCGDPAEIGKNVGDDLAEGKPTL 240 Query: 237 PVILAFQRGTK 247 P+I +GT Sbjct: 241 PLIYLMHQGTP 251 >gi|262376679|ref|ZP_06069907.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145] gi|262308389|gb|EEY89524.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145] Length = 325 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 119/312 (38%), Positives = 188/312 (60%), Gaps = 4/312 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLAC 69 D ++ I + I S V ++ V K+++ +GGKR+RP++ L A + H LA Sbjct: 16 DFAAMDTFINEGITSKVALVMAVSKHVVEAGGKRMRPIMCLLAAKACGAENLEPHRKLAA 75 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+S+AF ++++ + Sbjct: 76 IIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLISRAFDLLVDLNNMVL 135 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ S C +AEGE+ QL + TE YL++I KT+ LF A E +++++ ++ Sbjct: 136 LKDFSTGTCEIAEGEVLQLQSQHQPETTEATYLNIIHGKTSRLFELATEGAAILSD-KDE 194 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 RQ LK++ + G AFQ++DD+LDY + + +GKNIG+D GKPTLP+I A + T + Sbjct: 195 FRQPLKTFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPTLPLIAALKNTTGEQ 254 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + +I G E+L++ I+ E+ AL RA + A D+L+ LPDS ++++ Sbjct: 255 HEIIRRSIATG--GTEHLEQVIQIVNESGALDYCRQRATEETEIAIDALQALPDSEYRQA 312 Query: 310 LMEVVDFCLQRL 321 L+ + L R+ Sbjct: 313 LINLAKLALHRI 324 >gi|167842012|ref|ZP_02468696.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis MSMB43] Length = 330 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 127/311 (40%), Positives = 177/311 (56%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L + +LA Sbjct: 20 SDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQKHVLAA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 80 VVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 140 MEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAP 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 200 TEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTPEQ 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ P S +K+S Sbjct: 260 STLAREAIEHG--GTDRFDTIFDAITLSGALDHTLECARQEAQAAATAISSFPSSVFKES 317 Query: 310 LMEVVDFCLQR 320 L+E+ + R Sbjct: 318 LLELCFYSTSR 328 >gi|319760237|ref|YP_004124175.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str. BVAF] gi|318038951|gb|ADV33501.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str. BVAF] Length = 324 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 124/324 (38%), Positives = 183/324 (56%), Gaps = 8/324 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L +D+ VNF I KR+ S + +I +++Y+I SGGK++R + L A L Y+ Sbjct: 3 INQINKLIQQDIINVNFEIHKRLKSKITLINKLIQYIINSGGKKIRSSMVLLIAKSLTYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + HV++A IEFIH ATLLHDDVVD S +RRGK+ A +++GN SVLVGDF+ ++AF M Sbjct: 63 KNQHVIIATLIEFIHAATLLHDDVVDTSEMRRGKITANIMFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E +S L ++ +AEGE+ QL + +T Y+ +I +KTA LF A + S Sbjct: 123 MTELQSLRILSLMANAVNIIAEGEIMQLIHCHDPTITINHYMKIIYNKTARLFEVASQTS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY-RGEVNEMGKNIGEDFRNGKPTLPVI 239 +++A QAL +YG +GIAFQL+DDVLDY GK+ G D GKPTLP++ Sbjct: 183 AILANADIKQEQALGNYGKYIGIAFQLIDDVLDYDTSNTILFGKHTGNDLNEGKPTLPLL 242 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A T +E + + I +G N II+ + EY K ++ Sbjct: 243 HAIHHSTPKEASIIRQAIKNG----NNRHLLNIILNTMQQYGSLEYTRKCAETKINQAIS 298 Query: 300 C---LPDSSWKKSLMEVVDFCLQR 320 C LP S +KK+L + F + R Sbjct: 299 CLSILPASPYKKALKNLAYFIIHR 322 >gi|189184004|ref|YP_001937789.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda] gi|189180775|dbj|BAG40555.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda] Length = 338 Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 109/247 (44%), Positives = 166/247 (67%), Gaps = 3/247 (1%) Query: 10 KDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 KDM +VN +IL I S E +I +V Y +GGKR+RPMLT+ + + Y G +H LA Sbjct: 22 KDMSEVNNVILDCISSSQEQLIYEVGTYFFNAGGKRIRPMLTIIISKLFNYHGLSHYYLA 81 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH+ATLLHDDVVD+S +RR L W +TS+L+GDFL SQ+F ++I++ S Sbjct: 82 AAVELIHSATLLHDDVVDESKMRRSHPTVHLKWDTKTSILIGDFLFSQSFKLMIKSNSIR 141 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 AL++ SL T+ GE++QL+ N +TE++Y VI++KTA LF + E++++I+ Sbjct: 142 ALKSFSLSFNTIITGEVKQLTQLHNQKIITEDEYFRVIQAKTAELFGTSCEIAAIISNQS 201 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ-RGT 246 +K++G+ LG+ FQ+VDD+LDY G + +GKN+G+DF GK TLP+I+A+ + Sbjct: 202 APTCLLVKTFGIKLGLIFQIVDDILDYFGNSDSLGKNVGDDFMEGKATLPIIMAYNCASS 261 Query: 247 KREKNFW 253 + E++FW Sbjct: 262 QNERDFW 268 >gi|303258213|ref|ZP_07344220.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47] gi|302858966|gb|EFL82050.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47] Length = 326 Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 111/311 (35%), Positives = 187/311 (60%), Gaps = 3/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D+ V+ ++ + SD+ +I + Y++ +GGKR+RP++ + A L Y+G H+ LA Sbjct: 17 EDLLAVDREVIDDLQSDIPLIKKISDYIVTAGGKRMRPIVLMLIARALGYQGKEHIFLAT 76 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IE++HTA+LLHDDVVD+S LRRGK A WGN ++L GDF+ S+AF +++ T++ Sbjct: 77 MIEYVHTASLLHDDVVDESDLRRGKPTAGFKWGNAAAILTGDFMYSRAFQLMVRTQNLRI 136 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 E ++ ++EGE+ QL + + E Y VI+ KT VLF AA ++S++AG Sbjct: 137 CEIVAGAVNRVSEGEVIQLLNIHDTTLDEARYFDVIERKTGVLFEAAARMASVVAGASKE 196 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V + Y + LG AFQ++DDVLDY G + +GKN+G D R GK T+P+I A + ++ + Sbjct: 197 VEDKMAEYALCLGRAFQIIDDVLDYTGTKDNIGKNLGTDLREGKMTMPLIYALRHCSEED 256 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 ++ ++ +E++ + + A ++ + S G D+L CLP S++K S Sbjct: 257 AKIIRTAVSSNDPDLESVTRVILASGAIDACIEAAKKEVSRG---IDALNCLPTSAFKNS 313 Query: 310 LMEVVDFCLQR 320 L+E++ ++R Sbjct: 314 LIELLSLTVER 324 >gi|299768956|ref|YP_003730982.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1] gi|298699044|gb|ADI89609.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1] Length = 325 Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 122/314 (38%), Positives = 187/314 (59%), Gaps = 6/314 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLA 68 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A A L+ N LA Sbjct: 16 DFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDNM-QNAQRLA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 75 AIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNNMT 134 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E ++++AG Q Sbjct: 135 LLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAG-QE 193 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T Sbjct: 194 AYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHSTGE 253 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E + +I G V+ L + I++++ AL RA + A +L LPD+ +++ Sbjct: 254 EHAIIRRSIATG--GVDQLSQVIEIVQKSGALDYCHQRAQEETEAALQALSNLPDTPYRQ 311 Query: 309 SLMEVVDFCLQRLN 322 +L+ + L R+ Sbjct: 312 ALINLTQLALHRIQ 325 >gi|330815463|ref|YP_004359168.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3] gi|327367856|gb|AEA59212.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3] Length = 332 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 127/312 (40%), Positives = 178/312 (57%), Gaps = 2/312 (0%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 + DME+VN +I + SDV +I + +Y+I +GGKRLRP L L A L + LA Sbjct: 21 VDDMEQVNRVIRHSLSSDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGDGSSHRHTLA 80 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 81 AVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMR 140 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 141 VMEILSEATTIISEGEVLQLLNMHDADVDESRYMQVIRYKTAKLFEASARLGAVLAGADA 200 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 S A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I + GT Sbjct: 201 STEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIHLLEHGTPE 260 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 ++ + I G + + F + + AL T A Q A D++ P S +K Sbjct: 261 QQALAREAIEQG--GTDRFETIFEAITRSGALDHTLECARQEAQAAADAIFSFPSSIFKN 318 Query: 309 SLMEVVDFCLQR 320 SL+E+ + R Sbjct: 319 SLLELCSYSTTR 330 >gi|226951590|ref|ZP_03822054.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) [Acinetobacter sp. ATCC 27244] gi|294651249|ref|ZP_06728577.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC 19194] gi|226837665|gb|EEH70048.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) [Acinetobacter sp. ATCC 27244] gi|292822902|gb|EFF81777.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC 19194] Length = 347 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 121/314 (38%), Positives = 186/314 (59%), Gaps = 8/314 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL---MLEYRGDNHVLL 67 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A + + H L Sbjct: 38 DFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLTNMQQAQH--L 95 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 96 AAVIEMLHTATLVHDDVVDESNLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNNM 155 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L+ S C +AEGE+ QL D TEE YL++I KT+ LF A E ++++AG + Sbjct: 156 TLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEEIYLNIIHGKTSRLFELATEGAAILAGTE 215 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T Sbjct: 216 -EYREPLRRFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHSTG 274 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + +I G I E+L K I+ + L + RA A ++L+ LPD+ ++ Sbjct: 275 EDHAIIRRSIATGGI--EHLDKVIEIVHHSGGLDYCQKRAQQETDAALEALKALPDNEYR 332 Query: 308 KSLMEVVDFCLQRL 321 ++LM + L RL Sbjct: 333 QALMNLTLMALHRL 346 >gi|319786423|ref|YP_004145898.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317464935|gb|ADV26667.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 335 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 125/312 (40%), Positives = 182/312 (58%), Gaps = 7/312 (2%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALMLEYRGDNHVLLACA 70 V+ LI R+ SDV +I + ++++ +GGKRLRPML + ATA L D+H L A Sbjct: 27 VDSLIRNRLASDVVLINQIAEHIVSAGGKRLRPMLVVLAGQATATSLGTTADHHQL-AAI 85 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +++E E + Sbjct: 86 IEFIHTSTLLHDDVVDESDLRRGRSTANAIWGNAASVLVGDFLYSRSFQLMVELDRMEVM 145 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ +AEGE+ QL +N D E YL VI+ KTAVLF+A + +L + Sbjct: 146 QILADTTNRIAEGEVLQLLHVRNPDTDEAAYLRVIERKTAVLFAAGTRLGALASCADADT 205 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +QAL YGM LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I A + Sbjct: 206 QQALYDYGMALGYAFQIADDVLDYTADAADLGKNLGDDLAEGKATLPLIHAITHSDPATR 265 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + +G S + + + L + RA Y +A+ +L LP S ++L Sbjct: 266 ERLRQAVQEGDTSA--MPEVLAAIHATGGLEYSRKRAMDYAAEAEAALAGLPQSEALEAL 323 Query: 311 MEVVDFCLQRLN 322 + + ++R + Sbjct: 324 RGLARYAVERTH 335 >gi|29653729|ref|NP_819421.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493] gi|161831382|ref|YP_001596323.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331] gi|29540992|gb|AAO89935.1| farnesyl pyrophosphate synthetase [Coxiella burnetii RSA 493] gi|161763249|gb|ABX78891.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331] Length = 332 Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 122/311 (39%), Positives = 187/311 (60%), Gaps = 3/311 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLLAC 69 D+E V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y D H LA Sbjct: 22 DIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYEQDVEHQELAT 81 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF ++ + Sbjct: 82 VIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQILARRSNVPI 141 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+ +++A + Sbjct: 142 MKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNET 201 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++++ ++G +LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I A Q+ + Sbjct: 202 WQKSMAAFGFHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLIYAKQQAQPAQ 261 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I +G + ++L+ +M E RA T+ A +KA L+ LP S ++ + Sbjct: 262 AEHIREAIKNGDL--DDLQSIMKLMDETRAREYTQQCALKQAEKAHTYLQQLPPSPYRDA 319 Query: 310 LMEVVDFCLQR 320 L + F + R Sbjct: 320 LNALTQFVVSR 330 >gi|187925422|ref|YP_001897064.1| polyprenyl synthetase [Burkholderia phytofirmans PsJN] gi|187716616|gb|ACD17840.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN] Length = 330 Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 131/312 (41%), Positives = 181/312 (58%), Gaps = 4/312 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLA 68 +DM++VN +I R+ SDV +I + +Y+I +GGKRLRP L L A L E G H L A Sbjct: 20 EDMQQVNRVIRHRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGETTGHRHEL-A 78 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 79 AVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKMR 138 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 139 VMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGSDA 198 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 KTEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTPE 258 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + + I G + F + + AL T A Q A ++ PDS +K+ Sbjct: 259 QSALAREVIEQG--GTDRFDTIFEAITRSGALDHTLECAKKEAQAAAAAISSFPDSIFKE 316 Query: 309 SLMEVVDFCLQR 320 SL+E+ + R Sbjct: 317 SLLELCSYSTAR 328 >gi|328953238|ref|YP_004370572.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM 11109] gi|328453562|gb|AEB09391.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM 11109] Length = 325 Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 116/320 (36%), Positives = 182/320 (56%), Gaps = 3/320 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM+ D++++N + + + V +I +V +++ SGGKR+RP+L + A M RG Sbjct: 6 KMILQRLQPDIDRINLALSGNLATHVRLISEVWDHILISGGKRIRPLLFILAARMCGCRG 65 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ + E++H ATLLHDDVVD + RRG+ +A +WGNQ +LVGDFLLS+A + Sbjct: 66 DHLPDIGAIFEYLHAATLLHDDVVDAATERRGQSSANTIWGNQAVILVGDFLLSKALSIA 125 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +ET+ +E L+ +AEGE+ QL + L++TEE+Y VI KTA L SAA ++ + Sbjct: 126 VETRQIRIIEVLAQTTTYMAEGEVLQLVNTGRLEMTEEEYFDVITRKTAKLMSAACQIGA 185 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ GV + A+ +G+NLGI FQL+DD+LD+ G EMGK I D + GK TLP I Sbjct: 186 ILGGVDGRLEAAMADFGLNLGITFQLIDDILDFTGNAKEMGKPICNDLKEGKITLPFIHT 245 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRC 300 ++ E+ + + + + + + + + +D R A Y AK++L Sbjct: 246 LRQLGPTEQQSLGHLVRESDAA--RIAQELLPLMQRHGSIDYARRLAQEYTNAAKENLAL 303 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S K +EV D + R Sbjct: 304 FPSSPEKSLFLEVTDILVNR 323 >gi|262281247|ref|ZP_06059029.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus RUH2202] gi|262257478|gb|EEY76214.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus RUH2202] Length = 325 Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 122/314 (38%), Positives = 187/314 (59%), Gaps = 6/314 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLL 67 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A A L+ N L Sbjct: 15 SDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDNMA-NAQRL 73 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 74 AAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNNM 133 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E ++++AG Q Sbjct: 134 TLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAG-Q 192 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T Sbjct: 193 EAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHSTG 252 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 E + +I G V+ L + I++++ AL RA + A +L LPD+ ++ Sbjct: 253 DEHAIIRRSIATG--GVDQLSQVIEIVQKSGALDYCHQRAQEETEAALQALSNLPDTPYR 310 Query: 308 KSLMEVVDFCLQRL 321 ++L+ + L R+ Sbjct: 311 QALINLTQLALHRI 324 >gi|71083319|ref|YP_266038.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique HTCC1062] gi|91762251|ref|ZP_01264216.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique HTCC1002] gi|71062432|gb|AAZ21435.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique HTCC1062] gi|91718053|gb|EAS84703.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique HTCC1002] Length = 337 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 120/303 (39%), Positives = 183/303 (60%), Gaps = 1/303 (0%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACAIEFIHTA 77 I ++ SDV+++ + +Y I +GGKRLR +LTL +A + Y +G + LA +E IH A Sbjct: 33 IKSKLLSDVDLVQKMTEYHIDTGGKRLRALLTLGSAKLCGYTKGGRDINLAACVEMIHGA 92 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TL+HDDV+D +RRGK +WGN +SVL+GD+LLS+ F M+++ + E L+ LS + Sbjct: 93 TLMHDDVIDLGNIRRGKKTLNSIWGNHSSVLIGDYLLSRCFEMMVDDGNIEVLKLLSSTS 152 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 +A+GE+ QL +D+ EE Y +I +KTA LFSAA +V ++++ + ++AL+ Y Sbjct: 153 SKIAQGEVLQLQHKGEVDMLEETYFKIITAKTAELFSAATKVGAILSNKETKEKEALEFY 212 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G NLG+ FQ+ DD LDY ++ GK IG+DF GK TLPVIL FQ + EK+ K+ Sbjct: 213 GKNLGLTFQIADDTLDYNSDLKFFGKKIGKDFLEGKITLPVILLFQNVSSIEKDKLKNIF 272 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 S E+L ++++ + + +A + A +SL DS KK L + F Sbjct: 273 KQETRSNEDLNLTLELIKKYNIINECYKKAEHFINLASNSLTVFKDSDEKKILESLTSFS 332 Query: 318 LQR 320 LQR Sbjct: 333 LQR 335 >gi|258592999|emb|CBE69310.1| Polyprenyl synthetase [NC10 bacterium 'Dutch sediment'] Length = 325 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 116/303 (38%), Positives = 184/303 (60%), Gaps = 1/303 (0%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-HVLLACAIEFIHTA 77 +L+ I DVE+I ++++Y++ SGGKR+RP L L +A + Y G + H+ LA E++H A Sbjct: 21 LLQDISGDVELISEIIRYVLKSGGKRVRPALLLLSAKLCGYNGGSRHIDLAVVAEYMHAA 80 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TL+HDD++D + RRG +A WG+Q SVL GDFL +++ M++ + A + Sbjct: 81 TLIHDDIIDRADKRRGLPSANSTWGSQISVLAGDFLYARSLQMLVIDGDLAVMRAFADAT 140 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + EG++R++ ++ NLD+T ++YL +I SKTA L S A +LIAG Q AL + Sbjct: 141 VRMIEGQVREVQMAGNLDLTYDEYLDIITSKTAALISVACRTGALIAGRQPEEVAALTEF 200 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G+++GIAFQLVDD LD+ E + +GK +G DF+ GK T P++ + G++ ++ + Sbjct: 201 GLDVGIAFQLVDDALDFVAEEDRLGKPVGNDFKEGKVTFPMLHVMRAGSEADQGRIRELA 260 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 I +L + I+ RA+ T +Y +KAK SL PDS+ K+SL+ +VDF Sbjct: 261 AQESIGESDLVEVKAIVERYRAVPATMELVRTYLKKAKASLSIFPDSAAKRSLVLMVDFV 320 Query: 318 LQR 320 R Sbjct: 321 GDR 323 >gi|91785273|ref|YP_560479.1| octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400] gi|91689227|gb|ABE32427.1| Octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400] Length = 330 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 131/312 (41%), Positives = 180/312 (57%), Gaps = 4/312 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLA 68 +DM++VN +I R+ SDV +I + +Y+I +GGKRLRP L L A L E G H L A Sbjct: 20 EDMQQVNRVIRHRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGETTGHRHEL-A 78 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 79 AVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKMR 138 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 139 VMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGSDA 198 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 KTEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTPE 258 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 259 QSALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECAKQEAQAAAAAISSFPDSIFKD 316 Query: 309 SLMEVVDFCLQR 320 SL+E+ + R Sbjct: 317 SLLELCSYSTAR 328 >gi|262371901|ref|ZP_06065180.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii SH205] gi|262311926|gb|EEY93011.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii SH205] Length = 325 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 119/314 (37%), Positives = 188/314 (59%), Gaps = 8/314 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL---MLEYRGDNHVLL 67 D +++LI + I S V ++ V K+++ +GGKR+RP++ L A ++ + H L Sbjct: 16 DFAAMDYLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAAKACGLVNMQQAQH--L 73 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL++++F ++++ + Sbjct: 74 AAIIEMLHTATLVHDDVVDESNLRRGRPTANATWNNQTAVLVGDFLIARSFDLLVDLNNI 133 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L+ S C +AEGE+ QL + TEE YL +I KT+ LF A E ++++AG + Sbjct: 134 TLLKDFSTGTCEIAEGEVLQLQSQHQPETTEETYLRIIHGKTSRLFELATEGAAILAGTE 193 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T Sbjct: 194 -EYREPLRRFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHSTG 252 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 E + +I G I E+L K I+ + A+ + RA A ++L+ LPD+ ++ Sbjct: 253 EEHEIIRRSIATGGI--EHLDKVIQIVHNSGAIEYCQKRAQQETDGALEALKALPDNEYR 310 Query: 308 KSLMEVVDFCLQRL 321 ++L+ + L RL Sbjct: 311 QALINLTLMALHRL 324 >gi|153837920|ref|ZP_01990587.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810] gi|149748698|gb|EDM59549.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810] Length = 277 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 114/276 (41%), Positives = 167/276 (60%), Gaps = 1/276 (0%) Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 LRP+L + +A L Y+G H + A IEFIHTATLLHDDVVD+S +RRGK A +GN Sbjct: 1 LRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNA 60 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164 SVLVGDF+ +++F M+ E S + L+ +S +AEGE++QL + D TEE Y+ V Sbjct: 61 ASVLVGDFIYTRSFQMMTELGSMKILQLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQV 120 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 I SKTA LF +A ++ +++ V AL++YG LG AFQL+DDV+DY + +MGKN Sbjct: 121 IYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKN 180 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284 +G+D GKPTLP++ A + T + I +E L + +M+E +L T Sbjct: 181 VGDDLAEGKPTLPLLHAMRNTTPENALMIREAIEKAN-GMERLDEILAVMKEAGSLEYTT 239 Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +A KA L LP+S +K++L+ + ++R Sbjct: 240 QKALEEADKAIAELEVLPESEYKEALITLAHVAVKR 275 >gi|290473433|ref|YP_003466299.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004] gi|289172732|emb|CBJ79503.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004] Length = 323 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 127/316 (40%), Positives = 184/316 (58%), Gaps = 1/316 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + L + H+ Sbjct: 9 LTADDMAAVNETILNQLNSDVALINQLGYYIISGGGKRIRPMIAVLAGKALHCEKEKHIK 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A IEFIHTATLLHDDVVD+S +RRGK A ++GN SVLVGDF+ +++F M+ + S Sbjct: 69 VAALIEFIHTATLLHDDVVDESDMRRGKATANAMYGNAASVLVGDFIYTRSFQMMTDLDS 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ +S +AEGE+ QL + D +E+DY+ VI SKTA LF A +++++G Sbjct: 129 MRVLKLMSDATNVIAEGEVMQLMNCNDPDTSEDDYMRVIYSKTARLFEVAAHSAAILSGA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 AL+ YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++ A G Sbjct: 189 TPEQEAALRDYGRYLGTAFQLIDDLLDYDSDDSTLGKNTGDDLNEGKPTLPLLHAMHHGV 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + +S I G L M++ +L T RA KA +L+ L +S + Sbjct: 249 PEQSALIRSAIEQGN-GRHLLDTVLATMKQCGSLKYTRQRAEEEADKAISALQVLDESPY 307 Query: 307 KKSLMEVVDFCLQRLN 322 K +L+ + +QRL+ Sbjct: 308 KAALVGLAHVAVQRLS 323 >gi|291287109|ref|YP_003503925.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM 12809] gi|290884269|gb|ADD67969.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM 12809] Length = 324 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 189/320 (59%), Gaps = 4/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MK++E+ + E V ++ + SDVEM+ V +Y+ SGGKRLRP+ + +ALM Y Sbjct: 7 MKLVEN----EREAVEKNLIDNLDSDVEMVNKVAEYIFESGGKRLRPVFMILSALMCGYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ + LA +E+IHTATLLHDDV+D + RRGK +A V+GN +VL GDFL S+AF Sbjct: 63 GERTINLAGVVEYIHTATLLHDDVIDGAKYRRGKESANNVFGNDITVLCGDFLYSRAFMN 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ A L++ A T++EGE+ QL + ++ +T +DYL +I SKTAV+F+ E+ Sbjct: 123 LVKDGDSRAQMLLAVAARTMSEGEVFQLIKTADVKITMDDYLRIINSKTAVMFATCCEIG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + ++AL +G LGIAFQ+ DD+LDY G+ + GK G D + GK TLP+I Sbjct: 183 AILGEMPVEKQKALADFGKTLGIAFQMADDILDYLGDPEKTGKKPGTDLKEGKITLPIIT 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + EK ++ I D + S ENL +M +E Y Q+AK +L Sbjct: 243 LLANAAEEEKKRVRNIIVDERSSEENLNYILDLMNTYDVKAKSELVVDKYIQEAKANLNL 302 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 S ++ +L + D+ + R Sbjct: 303 FEKSKYRDALDFLADYMVAR 322 >gi|238026152|ref|YP_002910383.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1] gi|237875346|gb|ACR27679.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1] Length = 332 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 127/310 (40%), Positives = 176/310 (56%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DME++N +I + + SDV +I + +Y+I +GGKRLRP L L A L + LA Sbjct: 23 DMEQINRVIRQSLSSDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGDGSSHRHTLAAV 82 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ + Sbjct: 83 VEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRVM 142 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG S Sbjct: 143 EILSEATTIISEGEVLQLLNMHDADVDESRYMQVIRYKTAKLFEASARLGAVLAGADAST 202 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I + GT ++ Sbjct: 203 EAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIHLLEHGTPEQQ 262 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G + F + + AL T A Q A D+ P S +K SL Sbjct: 263 TLAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAADAFFSSPLSIFKNSL 320 Query: 311 MEVVDFCLQR 320 +E V + R Sbjct: 321 LEYVSYSTTR 330 >gi|33519569|ref|NP_878401.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus] gi|33517232|emb|CAD83615.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus] Length = 324 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 124/321 (38%), Positives = 183/321 (57%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L +D+ +NF I KR+ S++ +I +KY+I SGGK++R + L A L Y Sbjct: 3 INQINKLIKQDIININFEIHKRLKSNIILINKFIKYIINSGGKKIRSTMILLIAKSLTYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 H +LA IEFIHTATLLHDDV+D S RRGK A +++GN S+L+GDF+ ++AF M Sbjct: 63 KTQHTILATLIEFIHTATLLHDDVIDHSTTRRGKTTANIIFGNPASILIGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E +S L ++ +AEGE+ QL+ + +T +Y+ +I KTA LF A + S Sbjct: 123 MTELQSLRILSLMADAVNIIAEGEILQLTYCNDPTITMNNYMQIIYKKTARLFEVASQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG-EVNEMGKNIGEDFRNGKPTLPVI 239 +++A QAL +YG +GIAFQL+DD+LDY ++ GKNIG D GK TLP++ Sbjct: 183 AILAHANIQQEQALSNYGKYIGIAFQLIDDLLDYNASDIVSFGKNIGNDLNEGKLTLPLL 242 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A T +E + I D K + L IM++ +L T A + KA + L Sbjct: 243 HAIYHSTPKEASIIHQAITD-KNNQNLLYTVLNIMQQYGSLDYTRKCAETKINKAINCLN 301 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S +K +L + F L R Sbjct: 302 ILSPSPYKHALKHLAYFILTR 322 >gi|154706037|ref|YP_001425022.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway 5J108-111] gi|154355323|gb|ABS76785.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway 5J108-111] Length = 332 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 121/311 (38%), Positives = 187/311 (60%), Gaps = 3/311 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLLAC 69 D+ V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y D H LA Sbjct: 22 DIAAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYEQDVEHQELAT 81 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF ++ + Sbjct: 82 VIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQILARRSNVPI 141 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+ +++A + Sbjct: 142 MKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNET 201 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++++ ++G++LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I A Q+ + Sbjct: 202 WQKSMAAFGLHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLIYAKQQAQPAQ 261 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I +G + ++L+ +M E RA T+ A +KA L+ LP S ++ + Sbjct: 262 AEHIREAIKNGDL--DDLQSIMKLMDETRAREYTQQCALKQAEKAHTYLQQLPPSPYRDA 319 Query: 310 LMEVVDFCLQR 320 L + F + R Sbjct: 320 LNALTQFVVSR 330 >gi|255020838|ref|ZP_05292894.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC 51756] gi|254969629|gb|EET27135.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC 51756] Length = 322 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 121/314 (38%), Positives = 178/314 (56%), Gaps = 2/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM+ VN +I ++I S V IP + YLI +GGKRLRP++ L A M RG + Sbjct: 9 LVEADMQAVNRVIHEQIQSGVPTIPAMGAYLINAGGKRLRPIILLLAARMGGERGPRPIP 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIH+ATLLHDDVVD S LRR A +WGN +VLVGDFL +++F M++E Sbjct: 69 LAAVVEFIHSATLLHDDVVDGSELRRNHATANQLWGNAAAVLVGDFLYARSFEMMVEDGD 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + ++ +++GE+ QL + + D+ E Y VI +KTA LF AA + +++ + Sbjct: 129 MRIMATMAEATSVISQGEVAQLENADDPDLDAEAYFAVIAAKTAKLFEAAARIGAIVNAM 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + AL YG +G+AFQL+DD LDY+ E MGKN G+D +GK TLP I+A QR Sbjct: 189 EPEQELALARYGSLVGVAFQLMDDALDYQAEAATMGKNPGDDLVDGKATLPYIVAMQRAR 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +++ ++ + D + E+L I+ A+ T A + A D LR Sbjct: 249 PQDREVLRAALGDDR--REHLPAVLEIIARTGAIDYTLQSARERAEAAVDCLRHFGPGPE 306 Query: 307 KKSLMEVVDFCLQR 320 + +L + F +QR Sbjct: 307 RDALEFLARFSVQR 320 >gi|146329727|ref|YP_001209836.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A] gi|146233197|gb|ABQ14175.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A] Length = 348 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 114/317 (35%), Positives = 193/317 (60%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L +ME+ ++ + I ++V + V++Y + + GKR RPML L +A + +YRGD Sbjct: 32 IQRLIANEMEQTERVMQREIYTEVALAQSVMRYALQAKGKRFRPMLHLLSAGVCDYRGDF 91 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 A IEFIH ATLLHDDVVD S +RRG+ +A +++ N S+LVGDFL ++AF +++ Sbjct: 92 APTAAAFIEFIHNATLLHDDVVDSSDIRRGQASAHIIFSNAASILVGDFLYTRAFQLMVS 151 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + + L+ ++ +A GE+ QL+ N D+ E Y VI+ KTAVLFSAA ++++ + Sbjct: 152 SGNAAVLKTMADATNLIAAGEVMQLANMHNPDIDETCYYRVIELKTAVLFSAACKIAAQL 211 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AGV AL YG LG+AFQ++DD+LDY G+ +++GK +G+D GKPT+P+I A Q Sbjct: 212 AGVSEEKIAALADYGKKLGMAFQMIDDMLDYMGDESKIGKALGDDLAEGKPTMPLIRALQ 271 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + ++ ++ + G E + + ++++ AL T+ +A A ++L P+ Sbjct: 272 QLCDPDQKRLRAILQTG--DREAITEVITLLKKTDALAYTQAQAEKMATAAAEALMIFPE 329 Query: 304 SSWKKSLMEVVDFCLQR 320 + +K +L+ + + R Sbjct: 330 NDYKNALISLAYQAVHR 346 >gi|331000286|ref|ZP_08323970.1| octaprenyl pyrophosphate synthetase [Parasutterella excrementihominis YIT 11859] gi|329572452|gb|EGG54105.1| octaprenyl pyrophosphate synthetase [Parasutterella excrementihominis YIT 11859] Length = 326 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 111/311 (35%), Positives = 186/311 (59%), Gaps = 3/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D+ V+ ++ + SD+ +I + Y++ +GGKR+RP++ + A L Y+G H+ LA Sbjct: 17 EDLLAVDREVIDDLQSDIPLIKKISDYIVTAGGKRMRPIVLMLIARALGYQGKEHIFLAT 76 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IE++HTA+LLHDDVVD+S LRRGK A WGN ++L GDF+ S+AF +++ T++ Sbjct: 77 MIEYVHTASLLHDDVVDESDLRRGKPTAGFKWGNAPAILTGDFMYSRAFQLMVRTQNLRI 136 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 E ++ ++EGE+ QL + + E Y VI+ KT VLF AA ++S++AG Sbjct: 137 CEIVAGAVNRVSEGEVIQLLNIHDTTLDEARYFDVIERKTGVLFEAAARMASVVAGASKE 196 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V + Y + LG AFQ++DDVLDY G +GKN+G D R GK T+P+I A + ++ + Sbjct: 197 VEDKMAEYALCLGRAFQIIDDVLDYTGTKVNIGKNLGTDLREGKMTMPLIYALRHCSEED 256 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 ++ ++ +E++ + + A ++ + S G D+L CLP S++K S Sbjct: 257 AKIIRTAVSSNDPDLESVTRVILASGAIDACIEAGKKEVSRG---IDALNCLPTSAFKNS 313 Query: 310 LMEVVDFCLQR 320 L+E++ ++R Sbjct: 314 LIELLSLTVER 324 >gi|238561270|ref|ZP_00442352.2| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4] gi|251766623|ref|ZP_04819732.1| polyprenyl synthetase [Burkholderia mallei PRL-20] gi|254178909|ref|ZP_04885563.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399] gi|254202791|ref|ZP_04909154.1| polyprenyl synthetase [Burkholderia mallei FMH] gi|254208133|ref|ZP_04914483.1| polyprenyl synthetase [Burkholderia mallei JHU] gi|254357663|ref|ZP_04973937.1| polyprenyl synthetase [Burkholderia mallei 2002721280] gi|147747038|gb|EDK54115.1| polyprenyl synthetase [Burkholderia mallei FMH] gi|147752027|gb|EDK59094.1| polyprenyl synthetase [Burkholderia mallei JHU] gi|148026727|gb|EDK84812.1| polyprenyl synthetase [Burkholderia mallei 2002721280] gi|160694823|gb|EDP84831.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399] gi|238524982|gb|EEP88412.1| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4] gi|243065293|gb|EES47479.1| polyprenyl synthetase [Burkholderia mallei PRL-20] Length = 332 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 127/311 (40%), Positives = 178/311 (57%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 22 SDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTSQKHVLAA 81 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 82 VVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 141 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 142 MEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAP 201 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 202 TEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTPEQ 261 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ P S++K+S Sbjct: 262 STLAREAIEHG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSNFKES 319 Query: 310 LMEVVDFCLQR 320 L+E+ + + R Sbjct: 320 LLELCSYSMSR 330 >gi|209522097|ref|ZP_03270748.1| Polyprenyl synthetase [Burkholderia sp. H160] gi|209497469|gb|EDZ97673.1| Polyprenyl synthetase [Burkholderia sp. H160] Length = 330 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 127/311 (40%), Positives = 179/311 (57%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM++VN +I +R+ SDV +I + +Y+I +GGKRLRP L L A L + LA Sbjct: 20 EDMQQVNRVIRQRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGDTTGHRHELAA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 80 VVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKMRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E L+ ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 140 MEILAEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGADTK 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 200 TEAAAAEYGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTPEQ 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ P S +K+S Sbjct: 260 SALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECAKQEAQAAAAAISSFPHSIFKES 317 Query: 310 LMEVVDFCLQR 320 L+E+ + R Sbjct: 318 LLELCSYSTAR 328 >gi|186477401|ref|YP_001858871.1| polyprenyl synthetase [Burkholderia phymatum STM815] gi|184193860|gb|ACC71825.1| Polyprenyl synthetase [Burkholderia phymatum STM815] Length = 330 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 125/311 (40%), Positives = 179/311 (57%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM++VN +I R+ S+V +I + +Y+I +GGKRLRP L L A L R LA Sbjct: 20 EDMQQVNRVIRHRLASEVMLINQISEYIISAGGKRLRPALLLLVAGALGDRTGYRHELAA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 80 VVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKMRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ ++++G + Sbjct: 140 MEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLSGADAT 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 200 TEAAAAEFGRRIGTAFQIMDDWLDYTGTPESMGKNAGDDLREGKPTLPLIYLIERGTPEQ 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + + F + + AL T A Q A ++ P S +K+S Sbjct: 260 SALAREAIEQG--GTDRFDEIFEAITRSGALDHTLECAKQEAQAAATAISSFPSSIYKES 317 Query: 310 LMEVVDFCLQR 320 L+ + + R Sbjct: 318 LLNLCSYSTTR 328 >gi|260548979|ref|ZP_05823201.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624] gi|260408147|gb|EEX01618.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624] Length = 325 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 119/313 (38%), Positives = 184/313 (58%), Gaps = 4/313 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LAC 69 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A H LA Sbjct: 16 DFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDNMQHAQRLAA 75 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 76 IIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNNMTL 135 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E ++++AG Q + Sbjct: 136 LKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAG-QEA 194 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T E Sbjct: 195 YREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHSTGEE 254 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + +I G V+ L + I++++ AL + RA + A +L L D+ ++++ Sbjct: 255 HAIIRRSIATG--GVDQLTRVIEIVQKSGALDYCQRRAQEETEAALQALSILSDTPYRQA 312 Query: 310 LMEVVDFCLQRLN 322 L+ + L R+ Sbjct: 313 LINLTRLALHRIQ 325 >gi|53726074|ref|YP_104070.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344] gi|121600728|ref|YP_991797.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1] gi|124384831|ref|YP_001027290.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229] gi|126441901|ref|YP_001060502.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668] gi|126448324|ref|YP_001082773.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247] gi|52429497|gb|AAU50090.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344] gi|121229538|gb|ABM52056.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1] gi|124292851|gb|ABN02120.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229] gi|126221394|gb|ABN84900.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668] gi|126241194|gb|ABO04287.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247] Length = 330 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 127/311 (40%), Positives = 178/311 (57%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 20 SDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTSQKHVLAA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 80 VVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 140 MEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAP 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 200 TEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTPEQ 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ P S++K+S Sbjct: 260 STLAREAIEHG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSNFKES 317 Query: 310 LMEVVDFCLQR 320 L+E+ + + R Sbjct: 318 LLELCSYSMSR 328 >gi|53720615|ref|YP_109601.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243] gi|126451455|ref|YP_001067764.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1106a] gi|237813898|ref|YP_002898349.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346] gi|242316724|ref|ZP_04815740.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b] gi|254180568|ref|ZP_04887166.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655] gi|254190992|ref|ZP_04897498.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur 52237] gi|254199098|ref|ZP_04905513.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13] gi|52211029|emb|CAH37017.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243] gi|126225097|gb|ABN88637.1| polyprenyl synthetase [Burkholderia pseudomallei 1106a] gi|157938666|gb|EDO94336.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur 52237] gi|169656928|gb|EDS88325.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13] gi|184211107|gb|EDU08150.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655] gi|237505493|gb|ACQ97811.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346] gi|242139963|gb|EES26365.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b] Length = 332 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 127/311 (40%), Positives = 178/311 (57%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L + +LA Sbjct: 22 SDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQKHVLAA 81 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 82 VVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 141 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 142 MEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAP 201 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 202 TEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTPEQ 261 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ P S++K+S Sbjct: 262 STLAREAIEHG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSNFKES 319 Query: 310 LMEVVDFCLQR 320 L+E+ + R Sbjct: 320 LLELCSYSTSR 330 >gi|149927152|ref|ZP_01915409.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Limnobacter sp. MED105] gi|149824091|gb|EDM83312.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Limnobacter sp. MED105] Length = 330 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 120/313 (38%), Positives = 184/313 (58%), Gaps = 5/313 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVLL 67 DM++++ +I + S+V +I + Y+I +GGKRLRP L + TA L + + + L Sbjct: 18 DMQQLDQVIRTSLHSEVSLINQISDYIINAGGKRLRPALVILTARALGATQQQMQQTIEL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S +RRG++ A +GN +VLVGDFL S++F M+++ Sbjct: 78 AAIVEFIHTATLLHDDVVDESDMRRGRLTANAEYGNSAAVLVGDFLYSRSFQMMVKIGLM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + ++ LS T+AEGE+ QL K+ DVTE Y+ VI KTA LF A+ ++ ++ G Sbjct: 138 DVMDVLSEATNTIAEGEVLQLLNCKDPDVTEARYMQVIDFKTAKLFEASCRLAGIVTGQS 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 L +G +G AFQL+DDVLDY GE +GKN+G+D R GKPTLP+I A Q Sbjct: 198 KEAITNLGRFGAEVGSAFQLIDDVLDYAGESAALGKNVGDDLREGKPTLPLIHAMQHAKP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + +N + I +G +++ + + +L T +A + AK L L + + Sbjct: 258 QVQNQIRDAIANG--GTQDVSVIMASIEQTGSLAYTRNKAQALADSAKTRLGSLTSNPYT 315 Query: 308 KSLMEVVDFCLQR 320 ++L + D + R Sbjct: 316 EALAVLCDVAVNR 328 >gi|76809882|ref|YP_334895.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b] gi|167721317|ref|ZP_02404553.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei DM98] gi|167740286|ref|ZP_02413060.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 14] gi|167817505|ref|ZP_02449185.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 91] gi|167825907|ref|ZP_02457378.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 9] gi|167847393|ref|ZP_02472901.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei B7210] gi|167895981|ref|ZP_02483383.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 7894] gi|167904366|ref|ZP_02491571.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei NCTC 13177] gi|167912626|ref|ZP_02499717.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 112] gi|167920573|ref|ZP_02507664.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei BCC215] gi|254258017|ref|ZP_04949071.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a] gi|254299344|ref|ZP_04966794.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e] gi|76579335|gb|ABA48810.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b] gi|157809083|gb|EDO86253.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e] gi|254216706|gb|EET06090.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a] Length = 330 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 127/310 (40%), Positives = 178/310 (57%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L + +LA Sbjct: 21 DMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQKHVLAAV 80 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ + Sbjct: 81 VEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRVM 140 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 141 EILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPT 200 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 201 EAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTPEQS 260 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G + F + + AL T A Q A ++ P S++K+SL Sbjct: 261 TLAREAIEHG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSNFKESL 318 Query: 311 MEVVDFCLQR 320 +E+ + R Sbjct: 319 LELCSYSTSR 328 >gi|294671407|ref|ZP_06736256.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306884|gb|EFE48127.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 353 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 111/251 (44%), Positives = 165/251 (65%), Gaps = 6/251 (2%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L D+ +V+ +I + + S+V +I + Y+I +GGKRLRP++T+ + Sbjct: 30 MLENLPYFQQNLAADLGRVDVVINRAVQSEVALISQIGTYIISAGGKRLRPVITILSGRA 89 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 L D LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 90 LGCDNDGLYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTR 149 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S + LE ++ +AEGE+ QL N+D+TE YL VI+ KTA LF AA Sbjct: 150 AFQLMVGSGSMKILEVMADATNIIAEGEVMQLMNIGNIDITEAQYLQVIQYKTAKLFEAA 209 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++AG AL+ YGM +G AFQ++DDVLDY G+ ++GKN+G+D GKPTL Sbjct: 210 AQVGAILAGASAEQEAALRDYGMYVGTAFQIIDDVLDYSGDPEQIGKNVGDDLAEGKPTL 269 Query: 237 PVILAFQRGTK 247 P+I +G++ Sbjct: 270 PLIYLMNQGSQ 280 >gi|312795082|ref|YP_004028004.1| farnesyl pyrophosphate synthetase / Geranyltranstransferase / farnesyltransferase / Octaprenyl diphosphate synthase [Burkholderia rhizoxinica HKI 454] gi|312166857|emb|CBW73860.1| Farnesyl pyrophosphate synthetase (EC 2.5.1.1) / Geranyltranstransferase (EC 2.5.1.10) / Farnesyltransferase (EC 2.5.1.29) / Octaprenyl diphosphate synthase (EC 2.5.1.-) [Burkholderia rhizoxinica HKI 454] Length = 352 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 132/310 (42%), Positives = 182/310 (58%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM++VN +I R+ SDV +I + +Y+I +GGKRLRP L L A L R LA Sbjct: 43 DMQQVNRVIRTRLASDVVLINQIAEYIIGAGGKRLRPALLLLVANALGERSGQRHELAAV 102 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTATLLHDDVVD+S LRRGK A ++GN SVLVGDFL S+AF M++ + + Sbjct: 103 IEFIHTATLLHDDVVDESQLRRGKQTANALFGNAASVLVGDFLYSRAFQMMVACDNLRVM 162 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS +AEGE+ QL + DV + Y+ VI+ KTA LF AA ++ ++IAG ++ Sbjct: 163 QILSDATNVIAEGEVLQLLNMHDPDVDQARYMQVIRYKTAKLFEAAAQLGAVIAGAPPAL 222 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I + GT + Sbjct: 223 EAAAAEFGRTIGTAFQIMDDWLDYTGTPESMGKNAGDDLREGKPTLPLIYLIEHGTAEQA 282 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G + F + E+ AL T A + Q A ++ PDS +K+SL Sbjct: 283 QLARDAIEHG--GTDRFDTIFTAINESGALEHTLRCAEAEAQAAARAIFSFPDSQFKESL 340 Query: 311 MEVVDFCLQR 320 +E+ + R Sbjct: 341 LELCSYSASR 350 >gi|291279049|ref|YP_003495884.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1] gi|290753751|dbj|BAI80128.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1] Length = 327 Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 119/310 (38%), Positives = 194/310 (62%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D++ V +LK + S+V+M+ +V Y+ SGGKRLRP+ + ++ + Y G+ ++++ Sbjct: 16 DIKSVEDELLKNLDSEVQMVNEVASYVFKSGGKRLRPVFLILSSKLSGYEGNRSIVISGV 75 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E+IHTATLLHDDV+D + RRGK AA V+GN +VL GDFL S+AF +++ E Sbjct: 76 VEYIHTATLLHDDVIDGAMYRRGKKAANRVFGNDITVLCGDFLYSRAFVNLVKDGDPEVQ 135 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ A T++EGE+ QL + N D+T EDYL +I SKTA+LFS+ E+ ++++ Sbjct: 136 MILANAAKTMSEGEVFQLVKTANFDLTMEDYLKIIFSKTAILFSSCCEIGAVLSKSDKDK 195 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+ L+ YG +G+AFQ+ DD+LDY G+ N+ GK G D + GK TLP++L +EK Sbjct: 196 RENLREYGRLIGLAFQMSDDILDYLGDENKTGKKPGTDLKEGKMTLPLLLLRDLIDDKEK 255 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 K I S ++L +M+++ E SY +KAK+ L+ P+S++K++L Sbjct: 256 KNLKEIILKEDPSEDDLIYIIGLMKKHNIKEKAEQFVDSYIEKAKEKLQIFPNSTYKEAL 315 Query: 311 MEVVDFCLQR 320 + + ++ ++R Sbjct: 316 IYLSEYVIKR 325 >gi|254456546|ref|ZP_05069975.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter sp. HTCC7211] gi|207083548|gb|EDZ60974.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter sp. HTCC7211] Length = 337 Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 116/300 (38%), Positives = 179/300 (59%), Gaps = 1/300 (0%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACAIEFIHTATLL 80 ++ SDVE++ + Y I +GGKRLR +LTL +A + Y +G V LA +E IH ATL+ Sbjct: 36 KLNSDVELVQKMTNYHIKTGGKRLRALLTLGSAKLCGYSKGSRDVNLAACVELIHGATLM 95 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D+ +RRGK +WGN +SVL+GD+LLS+ F M++E + E L+ LS + + Sbjct: 96 HDDVIDEGIIRRGKETLNEIWGNHSSVLIGDYLLSRCFEMMVEDGNLEVLKLLSSTSSKI 155 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 A+GE+ QL +D+ EE YL +I +KTA LF+A+ +V ++++ V N + AL+ YG N Sbjct: 156 AQGEVLQLQHKGEVDMLEETYLKIISAKTAELFAASTKVGAILSDVDNKEKDALEFYGRN 215 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 LG+ FQ+ DD LDY E+ GK +G+DF GK TLP+IL FQ+ EK K Sbjct: 216 LGLTFQIADDTLDYNSELKMFGKTVGQDFFEGKITLPIILLFQKLDLIEKENLKKIFIKE 275 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ +K ++++ + + + +A Y A ++L +S K + F L R Sbjct: 276 IRDKDDFEKTISLIKKYKIIEECYQKAQHYINLASNALTVFEESKEKNIFKNLTSFSLAR 335 >gi|319944647|ref|ZP_08018914.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599] gi|319742086|gb|EFV94506.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599] Length = 329 Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 122/318 (38%), Positives = 185/318 (58%), Gaps = 9/318 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-------RGD 62 +D+ +V+ +I +R+ S V +I + Y+I +GGKRLRP+L A L Y Sbjct: 12 EDLAEVDRVIKERLDSPVALIRTIATYIISAGGKRLRPVLLTLFARALGYGQTEQQRAQG 71 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +H L+A +EFIHTATLLHDD+VD+S LRRG A +GN SVLVGDFL S++F M++ Sbjct: 72 HHWLMAAVVEFIHTATLLHDDIVDESTLRRGAPTANAQFGNAASVLVGDFLYSRSFQMMV 131 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E + L+ L+ +AEGE+ QL + DV E YL VI+ KTA LF A+ + ++ Sbjct: 132 EVEQLHILKTLADATNVIAEGEVLQLLNCNDPDVDEAAYLQVIRFKTAKLFEASARIGAV 191 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AG + A +YG +LG AFQ++DDVLDY GE +GKNIG+D R GK TLP+I Sbjct: 192 LAGATPELEDAAAAYGRHLGTAFQIIDDVLDYSGESETLGKNIGDDLREGKATLPLIRVM 251 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + G+ ++ + I +G+ E+ ++ AL A +A +L +P Sbjct: 252 EVGSPEDREIVRQAILNGE--TEHFDLIHQAIQRCDALGYARQLAEQEANRAHAALAQMP 309 Query: 303 DSSWKKSLMEVVDFCLQR 320 S ++++L+ + + + R Sbjct: 310 PSQYREALVYLSSYSVSR 327 >gi|307731052|ref|YP_003908276.1| polyprenyl synthetase [Burkholderia sp. CCGE1003] gi|323527410|ref|YP_004229563.1| polyprenyl synthetase [Burkholderia sp. CCGE1001] gi|307585587|gb|ADN58985.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003] gi|323384412|gb|ADX56503.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001] Length = 330 Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 130/312 (41%), Positives = 181/312 (58%), Gaps = 4/312 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLA 68 +DM++VN +I R+ S+V +I + +Y+I +GGKRLRP L L A L E G H L A Sbjct: 20 EDMQQVNRVIRHRLASEVMLINQISEYIISAGGKRLRPALLLLVAGALGETTGHRHEL-A 78 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 79 AVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKMR 138 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 139 VMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGADA 198 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 RTEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTPE 258 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + + I G + F + + AL T A Q A ++ PDS +K+ Sbjct: 259 QSALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECAKQEAQAAAAAISSFPDSIYKE 316 Query: 309 SLMEVVDFCLQR 320 SL+E+ + R Sbjct: 317 SLLELCSYSTAR 328 >gi|2547044|dbj|BAA22867.1| solanesyl diphosphate synthase [Rhodobacter capsulatus] Length = 325 Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 116/314 (36%), Positives = 187/314 (59%), Gaps = 4/314 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LA 68 +D ++ I + I S V ++ V K+++ +GGKR+RP++ L A H LA Sbjct: 15 QDFAAMDQFINEGISSKVALVMSVSKHVVEAGGKRMRPIMCLLAAYACGETNLKHAQKLA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 75 AIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLDNMI 134 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L+ S C +AEGE+ QL D TE+ YL +I KT+ LF A E ++++AG + Sbjct: 135 LLKDFSTGTCEIAEGEVLQLQAQHQPDTTEDIYLQIIHGKTSRLFELATEGAAILAG-KP 193 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 R+ L+ + + G AFQ++DD+LDY + + +GKNIG+D GKPTLP+I A Q Sbjct: 194 EYREPLRRFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPTLPLIAAMQNTQGE 253 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 +++ + +I G S L++ I++ + AL RA ++A +L LP+S++++ Sbjct: 254 QRDLIRRSIATGGTS--QLEQVIAIVQNSGALDYCHKRATEETERALQALEILPESTYRQ 311 Query: 309 SLMEVVDFCLQRLN 322 +L+ + L R+ Sbjct: 312 ALVNLTRLALDRIQ 325 >gi|167586043|ref|ZP_02378431.1| Trans-hexaprenyltranstransferase [Burkholderia ubonensis Bu] Length = 331 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 127/311 (40%), Positives = 179/311 (57%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 21 SDMEQVNRVIRQSLASDVVLINQIAEYIIGAGGKRLRPALLLFVAGALGETSHQRHVLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 81 VVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG + Sbjct: 141 MEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEASARLGAVLAGADAT 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 201 TEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTPEQ 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + + F + + AL T A Q A ++ PDS +K+S Sbjct: 261 AALAREAIEQG--GTDRFETIFDAITRSGALDHTLECARQEAQAAAAAIAAFPDSVYKES 318 Query: 310 LMEVVDFCLQR 320 L+E+ + R Sbjct: 319 LLELCSYSTSR 329 >gi|170695309|ref|ZP_02886455.1| Polyprenyl synthetase [Burkholderia graminis C4D1M] gi|170139709|gb|EDT07891.1| Polyprenyl synthetase [Burkholderia graminis C4D1M] Length = 330 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 129/312 (41%), Positives = 183/312 (58%), Gaps = 4/312 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLA 68 +DM++VN +I R+ S+V +I + +Y+I +GGKRLRP L L A L E G H L A Sbjct: 20 EDMQQVNRVIRHRLASEVMLINQISEYIISAGGKRLRPALLLLVAGALGETTGHRHEL-A 78 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 79 AVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKMR 138 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +E L+ ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 139 VMEILAEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGADA 198 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 RIEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTPE 258 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + + I G + + F + + AL T A Q A ++ PDS +K+ Sbjct: 259 QSALAREAIEQG--GTDRFETIFEAITRSGALDHTLECAKQEAQAAAAAISSFPDSIYKE 316 Query: 309 SLMEVVDFCLQR 320 SL+E+ + R Sbjct: 317 SLLELCSYSTAR 328 >gi|255318820|ref|ZP_05360046.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82] gi|262378919|ref|ZP_06072076.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164] gi|255304076|gb|EET83267.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82] gi|262300204|gb|EEY88116.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164] Length = 325 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 116/314 (36%), Positives = 186/314 (59%), Gaps = 4/314 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LA 68 +D ++ I + I S V ++ V K+++ +GGKR+RP++ L A H LA Sbjct: 15 QDFAAMDQFINEGISSKVALVMSVSKHVVEAGGKRMRPIMCLLAAYACGETNLKHAQKLA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 75 AIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLDNMI 134 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L+ S C +AEGE+ QL D TE YL +I KT+ LF A E ++++AG + Sbjct: 135 LLKDFSTGTCEIAEGEVLQLQAQHQPDTTEAVYLQIIHGKTSRLFELATEGAAILAG-KP 193 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 R+ L+ + + G AFQ++DD+LDY + + +GKNIG+D GKPTLP+I A Q Sbjct: 194 EYREPLRRFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPTLPLIAAMQNTQGE 253 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 +++ + +I G S L++ I++ + AL RA ++A +L LP+S++++ Sbjct: 254 QRDLIRRSIATGGTS--QLEQVIAIVQNSGALDYCHKRATEETERALQALEILPESTYRQ 311 Query: 309 SLMEVVDFCLQRLN 322 +L+ + L R+ Sbjct: 312 ALVNLTRLALDRIQ 325 >gi|295677741|ref|YP_003606265.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002] gi|295437584|gb|ADG16754.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002] Length = 330 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 128/311 (41%), Positives = 179/311 (57%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM++VN +I +R+ SDV +I + +Y+I +GGKRLRP L L A L + LA Sbjct: 20 EDMQQVNRVIRQRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGDTTGHRHELAA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 80 VVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKMRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 140 MEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGADAK 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 200 TEAAAAEYGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTPEQ 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ P S +K+S Sbjct: 260 SALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECAKQEAQAAAAAVSSFPHSIFKES 317 Query: 310 LMEVVDFCLQR 320 L+E+ + R Sbjct: 318 LLELCSYSTAR 328 >gi|163858538|ref|YP_001632836.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM 12804] gi|163262266|emb|CAP44569.1| putative octaprenyl-diphosphate synthase [Bordetella petrii] Length = 345 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 109/259 (42%), Positives = 165/259 (63%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM +V+ LI R+ S V++I +VV++LI +GGKRLRPML + G Sbjct: 29 IQRLVASDMGQVDALIRGRLHSRVDLIVEVVEHLIAAGGKRLRPMLVILAGRACGGHGQG 88 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 LA IEFIHT+TLLHDDVVD+S++RRG+ A +WG+ +VLVGDFL S++F +++E Sbjct: 89 LHKLATIIEFIHTSTLLHDDVVDESSMRRGRSTANAIWGSLPAVLVGDFLYSRSFQLMVE 148 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S + ++ + LAEGE+ QL N DV E Y+ VIK KTAVLF+A+ +++ Sbjct: 149 LGSMQIMQIIGKTTNQLAEGEILQLLHVHNPDVDEAAYMQVIKHKTAVLFAASTTAGAIL 208 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG +++ ++ +G +LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I A Sbjct: 209 AGADRELQRRMEVFGEHLGYAFQITDDVLDYTADAEQLGKNLGDDLAEGKVTLPLIHAMN 268 Query: 244 RGTKREKNFWKSTINDGKI 262 ++N + + +G + Sbjct: 269 FSQGAQRNRLREIVQNGGM 287 >gi|78065141|ref|YP_367910.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383] gi|77965886|gb|ABB07266.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383] Length = 331 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 127/311 (40%), Positives = 177/311 (56%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 21 SDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 81 VVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 141 MEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAP 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G V MGKN G+D R GKPTLP+I +RGT + Sbjct: 201 TEAAAAEYGRRIGTAFQIMDDWLDYAGTVEAMGKNAGDDLREGKPTLPLIYLIERGTPEQ 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ PDS +K+S Sbjct: 261 SALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECARQEAQAAAAAIAAFPDSVYKES 318 Query: 310 LMEVVDFCLQR 320 L+ + + R Sbjct: 319 LLALCSYSTSR 329 >gi|85858101|ref|YP_460303.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / decaprenyl diphosphate synthase [Syntrophus aciditrophicus SB] gi|85721192|gb|ABC76135.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / decaprenyl diphosphate synthase [Syntrophus aciditrophicus SB] Length = 324 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 113/296 (38%), Positives = 174/296 (58%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+V +IP++V +L+ SGGKR RP+L L +A + Y+G L+ +EFIHTA+L HDDV Sbjct: 27 SEVAIIPEIVTHLLGSGGKRFRPLLLLISADLFGYQGRRCHTLSAVLEFIHTASLFHDDV 86 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D + RRGKV+A +WGN VLVGDFL S+A+ ++ E S E + +S + ++EGE Sbjct: 87 IDKAESRRGKVSANNIWGNAAVVLVGDFLYSKAYQLMAEDGSMEIMHLISTTSNVMSEGE 146 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + QL +++TEEDYL +I+ KTA+L SAA + + G + +ALK +G+ LG A Sbjct: 147 VFQLIKCGEVNLTEEDYLKIIEKKTAILISAACALGGYLGGAEVHQIEALKQFGLRLGSA 206 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD LDY + GK IG+D GK TLP+I +R T E+ F ++ + + + Sbjct: 207 FQMTDDTLDYVAREEDFGKVIGKDLNEGKMTLPLIYTLKRCTPEERKFIETALAERRTRE 266 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ + D +A + + + L LP+ K++L V +F L R Sbjct: 267 MPAGDILTLISRYDGITDALNQAETLIDEGRTFLAGLPEGPAKEALFAVSEFVLNR 322 >gi|83721521|ref|YP_441686.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264] gi|167618604|ref|ZP_02387235.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis Bt4] gi|257137855|ref|ZP_05586117.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264] gi|83655346|gb|ABC39409.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264] Length = 330 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 130/311 (41%), Positives = 179/311 (57%), Gaps = 4/311 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L E+ HVL A Sbjct: 21 DMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGEHTSQKHVL-AA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 80 VVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 140 MEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAP 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 200 TEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTPEQ 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ P S +K+S Sbjct: 260 STLAREAIEHG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPPSIFKES 317 Query: 310 LMEVVDFCLQR 320 L+E+ + R Sbjct: 318 LLELCFYSTSR 328 >gi|161525972|ref|YP_001580984.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616] gi|189349309|ref|YP_001944937.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC 17616] gi|221213256|ref|ZP_03586231.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD1] gi|160343401|gb|ABX16487.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616] gi|189333331|dbj|BAG42401.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC 17616] gi|221166708|gb|EED99179.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD1] Length = 331 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 125/310 (40%), Positives = 176/310 (56%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 22 DMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVLAAV 81 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ + Sbjct: 82 VEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDYLYSRSFEMMVGVGKMRVM 141 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 142 EILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPT 201 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 202 EAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTPEQA 261 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G + F + + AL T A A ++ PDS++K+SL Sbjct: 262 ALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEALAAAAAITAFPDSTYKESL 319 Query: 311 MEVVDFCLQR 320 + + + R Sbjct: 320 LALCSYSTSR 329 >gi|50085967|ref|YP_047477.1| octaprenyl-diphosphate synthase [Acinetobacter sp. ADP1] gi|49531943|emb|CAG69655.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter sp. ADP1] Length = 325 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 117/313 (37%), Positives = 183/313 (58%), Gaps = 4/313 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLAC 69 D ++ I + I S V ++ V K+++ +GGKR+RP++ L A + H LA Sbjct: 16 DFAAMDTFINEGITSKVALVMAVSKHVVEAGGKRMRPIMCLLAAKACGSTDLEQHRKLAA 75 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+S+AF ++++ Sbjct: 76 IIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLISRAFDLLVDLNDMVL 135 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ S C +AEGE+ QL + + TE+ YL++I KT+ LF A E +++++G Sbjct: 136 LKDFSTGTCEIAEGEVLQLQSQHDPETTEQTYLNIIHGKTSRLFELATEGAAILSGTPE- 194 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A Q E Sbjct: 195 YREPLRHFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALQHTQGEE 254 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + +I G I L++ I++++ AL RA Q A +L+ LP+S +++ Sbjct: 255 HDIVRRSIATGGI--HQLEQVIQIVQQSGALDYCRKRAEEETQAALAALQHLPESEARQA 312 Query: 310 LMEVVDFCLQRLN 322 L + L R+ Sbjct: 313 LFNLTQLALHRIQ 325 >gi|262369367|ref|ZP_06062695.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046] gi|262315435|gb|EEY96474.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046] Length = 325 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 115/314 (36%), Positives = 183/314 (58%), Gaps = 4/314 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLA 68 +D ++ I + I S V ++ V K+++ +GGKR+RP++ L A + LA Sbjct: 15 QDFATMDTFINEGITSKVALVMAVSKHVVEAGGKRMRPIMCLLAAKACGAEDLERQRKLA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+S+AF ++++ Sbjct: 75 AIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLISRAFDLLVDLGDMT 134 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L+ S C +AEGE+ QL + TE+ YL +I KT+ LF A E +++++G Sbjct: 135 LLKDFSTGTCEIAEGEVLQLQAQHQPETTEQTYLDIIHGKTSRLFELATEGAAILSGTPQ 194 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A + T Sbjct: 195 -YREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALKNTTGE 253 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E + + +I G + +L + I+ + AL RA+ + A +L+ LPDS +++ Sbjct: 254 EHDIVRRSIATGGTA--DLDQVIAIVNSSGALDYCRQRAHEETEAALQALQALPDSQYRQ 311 Query: 309 SLMEVVDFCLQRLN 322 +L+ + L R+ Sbjct: 312 ALVNLTQLALHRIQ 325 >gi|167564177|ref|ZP_02357093.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis EO147] gi|167571298|ref|ZP_02364172.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis C6786] Length = 330 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 126/311 (40%), Positives = 176/311 (56%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 20 SDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTSQKHVLAA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 80 VVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 140 MEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAP 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 200 TEAAAAEYGRRIGTAFQIMDDWLDYAGTAASMGKNAGDDLREGKPTLPLIYLIERGTPEQ 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ P S +K+S Sbjct: 260 SALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSIFKES 317 Query: 310 LMEVVDFCLQR 320 L+E+ + R Sbjct: 318 LLELCSYSTSR 328 >gi|134280083|ref|ZP_01766794.1| polyprenyl synthetase [Burkholderia pseudomallei 305] gi|134248090|gb|EBA48173.1| polyprenyl synthetase [Burkholderia pseudomallei 305] Length = 309 Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 126/309 (40%), Positives = 176/309 (56%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 ME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L + +LA + Sbjct: 1 MEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQKHVLAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ +E Sbjct: 61 EFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRVME 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 121 ILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 181 AAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTPEQST 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G + F + + AL T A Q A ++ P S +K+SL+ Sbjct: 241 LAREAIEHG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSIFKESLL 298 Query: 312 EVVDFCLQR 320 E+ + R Sbjct: 299 ELCSYSTSR 307 >gi|115350537|ref|YP_772376.1| trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD] gi|170699961|ref|ZP_02890988.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10] gi|172059569|ref|YP_001807221.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6] gi|115280525|gb|ABI86042.1| Trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD] gi|170135109|gb|EDT03410.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10] gi|171992086|gb|ACB63005.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6] Length = 331 Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 126/311 (40%), Positives = 176/311 (56%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 21 SDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 81 VVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 141 MEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAP 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 201 TEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTPEQ 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ PDS +K+S Sbjct: 261 SALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAITAFPDSIYKES 318 Query: 310 LMEVVDFCLQR 320 L+ + + R Sbjct: 319 LLALCSYSTSR 329 >gi|330901423|gb|EGH32842.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 262 Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 111/262 (42%), Positives = 162/262 (61%), Gaps = 2/262 (0%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M Sbjct: 3 GDDVRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEM 62 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S E ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ + Sbjct: 63 MVELGSMEVMKILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSA 122 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 123 AALCNAPQEQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIY 182 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G+ + + I G + E+L+ + AL T A Y +A L Sbjct: 183 TMREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDA 240 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S ++ +L+E+ +F + R + Sbjct: 241 LPPSEYRDALVELSEFAVARTH 262 >gi|107021658|ref|YP_619985.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054] gi|116688604|ref|YP_834227.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424] gi|170731903|ref|YP_001763850.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3] gi|105891847|gb|ABF75012.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054] gi|116646693|gb|ABK07334.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424] gi|169815145|gb|ACA89728.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3] Length = 331 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 126/311 (40%), Positives = 176/311 (56%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 21 SDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 81 VVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 141 MEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAP 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 201 TEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTPEQ 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ PDS +K+S Sbjct: 261 SALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECARQEAQAAAAAIAAFPDSIYKES 318 Query: 310 LMEVVDFCLQR 320 L+ + + R Sbjct: 319 LLGLCSYSTSR 329 >gi|171316229|ref|ZP_02905452.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5] gi|171098643|gb|EDT43440.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5] Length = 331 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 126/311 (40%), Positives = 176/311 (56%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 21 SDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 81 VVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 141 MEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAP 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 201 TEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTPEQ 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ PDS +K+S Sbjct: 261 SALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAITAFPDSIYKES 318 Query: 310 LMEVVDFCLQR 320 L+ + + R Sbjct: 319 LLGLCSYSTSR 329 >gi|254253318|ref|ZP_04946636.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158] gi|124895927|gb|EAY69807.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158] gi|325528031|gb|EGD05253.1| polyprenyl synthetase [Burkholderia sp. TJI49] Length = 331 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 126/311 (40%), Positives = 176/311 (56%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 21 SDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 81 VVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 141 MEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAP 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 201 TEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTPEQ 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ PDS +K+S Sbjct: 261 SALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAIAAFPDSIYKES 318 Query: 310 LMEVVDFCLQR 320 L+ + + R Sbjct: 319 LLGLCSYSTSR 329 >gi|221202398|ref|ZP_03575430.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD2M] gi|221208142|ref|ZP_03581147.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD2] gi|221172045|gb|EEE04487.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD2] gi|221177675|gb|EEE10090.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD2M] Length = 331 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 124/310 (40%), Positives = 176/310 (56%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 22 DMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVLAAV 81 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ + Sbjct: 82 VEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDYLYSRSFEMMVGVGKMRVM 141 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 142 DILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPT 201 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 202 EAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTPEQA 261 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + I G + F + + AL T A A ++ PDS++K+SL Sbjct: 262 ALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEALAAAAAITAFPDSTYKESL 319 Query: 311 MEVVDFCLQR 320 + + + R Sbjct: 320 LALCSYSTSR 329 >gi|206561780|ref|YP_002232545.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315] gi|198037822|emb|CAR53766.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315] Length = 331 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 126/311 (40%), Positives = 176/311 (56%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 21 SDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 81 VVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 141 MEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAP 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 201 TEAAAAEYGRRVGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTPEQ 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ PDS +K+S Sbjct: 261 SALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECARQEAQAAAAAIAAFPDSIYKES 318 Query: 310 LMEVVDFCLQR 320 L+ + + R Sbjct: 319 LLGLCSYSTSR 329 >gi|171463010|ref|YP_001797123.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192548|gb|ACB43509.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 334 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 118/313 (37%), Positives = 184/313 (58%), Gaps = 3/313 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVL-LA 68 D + ++ +I +R+ S V +I + Y+I +GGKR+RP +L L + + H+L ++ Sbjct: 20 DFKALDEVIRQRLASKVALIDQISTYIIQAGGKRVRPALLMLVAKALANGKQTPHILEMS 79 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M+++ Sbjct: 80 AVVEFIHTATLLHDDVVDESTLRRGRKTANAAFGNAASVLVGDFLYSRAFQMMVDPNDLR 139 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ LS T+AEGE+ QL + +V EE YL VI+ KTA LF A+ E+ +++A N Sbjct: 140 VMQILSDATNTIAEGEVLQLLNMNDPEVDEESYLQVIRYKTAKLFEASTELGAILANATN 199 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + R+ ++G ++G AFQL+DD+LDY +MGKN G+D R GKPTLP+I + G+ Sbjct: 200 AQREQAAAFGRHIGTAFQLMDDLLDYTANAAQMGKNAGDDLREGKPTLPLIYLLENGSSE 259 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENR-ALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 E+ ++ I + +++ + +N AL T+ A A L+ P + Sbjct: 260 EQLLVRAAIEQNQDLPDDVFAQILAAVQNSGALEYTQAAAKREADLAMSYLKDFPANPAS 319 Query: 308 KSLMEVVDFCLQR 320 ++L + + L R Sbjct: 320 QALEALCAYSLTR 332 >gi|134294668|ref|YP_001118403.1| trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4] gi|134137825|gb|ABO53568.1| Trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4] Length = 331 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 125/311 (40%), Positives = 176/311 (56%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +LA Sbjct: 21 SDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 81 VVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + ++++G Sbjct: 141 MEILSEATTIISEGEVLQLLNMHDADVDESRYMQVIRYKTAKLFEASARLGAVLSGADAP 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 201 TEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTPEQ 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I G + F + + AL T A Q A ++ PDS +K+S Sbjct: 261 AALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECARQEAQAAAAAIATFPDSIYKES 318 Query: 310 LMEVVDFCLQR 320 L+ + + R Sbjct: 319 LLGLCSYSTSR 329 >gi|71897572|ref|ZP_00679817.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1] gi|71732475|gb|EAO34528.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1] Length = 333 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 181/320 (56%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ DM ++ LI R+ SD+ +I + ++I SGGKRLRPMLT+ + + Sbjct: 14 LPQIQSFAASDMAAIDTLIHDRLTSDIVLINQIADHIICSGGKRLRPMLTMLAGHAIGHT 73 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA IEFIHTATLLHDDVVD S LRR A +WGN SVLVGDFL S++F + Sbjct: 74 GPHHHQLAAIIEFIHTATLLHDDVVDGSELRRSSSTANALWGNAPSVLVGDFLYSRSFQL 133 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + E ++ L+ ++EGE+ QL N D E YL VI+ KTA+LF+AA ++ Sbjct: 134 MTELANLEVMQILAETTNRISEGEVLQLLHVHNPDTDETTYLSVIERKTAILFAAAAQLG 193 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L + + + YGM LG AFQ+ DDVLDY +++GKN+G+D GK TLPVI Sbjct: 194 ALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGKNLGDDLAEGKATLPVIH 253 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + I+ G + + + +R +L + RA +Y A+ +L Sbjct: 254 AMTHSDAATCERLRMIISKGD--SDAMPEVLNAIRTTGSLDYSRQRASAYAATAERALEG 311 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ +L + + +QR Sbjct: 312 LPETEAVAALRGLARYAVQR 331 >gi|157803653|ref|YP_001492202.1| octaprenyl-diphosphate synthase [Rickettsia canadensis str. McKiel] gi|157784916|gb|ABV73417.1| Octaprenyl-diphosphate synthase [Rickettsia canadensis str. McKiel] Length = 327 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 131/323 (40%), Positives = 207/323 (64%), Gaps = 5/323 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K+ +DL +++ K+N LI+ + SD +I V KYL+ +GGKR+RP+LT+ TA M +Y+ Sbjct: 5 VKIQQDLK-EEVTKLNNLIISCLKSDEGLIEIVGKYLLEAGGKRIRPLLTIITAKMFDYK 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA A+EFIHTATLLHDDVVDDS LRR K A ++WG++TS+LVGDFL SQ+F + Sbjct: 64 GDNHIKLASAVEFIHTATLLHDDVVDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ S +A+ L+ + ++EGE+ QL L++ +T ++Y ++KSKTA LF A+ +V Sbjct: 124 MVAAGSIKAMNILAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFGASCKV 183 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++IA + V + ++ +G LG FQ++DD+LDY G+ ++GKNIG+DF GK TLP+I Sbjct: 184 GAIIAEQVDHVSKDMQDFGKLLGTIFQVIDDLLDYLGDDKQVGKNIGDDFLEGKVTLPLI 243 Query: 240 LAFQRGTKREKNFW-KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 + +++K W ++ I K + E K +M E+ +T + + L Sbjct: 244 FLYNT-LEQDKQLWLQNVIKCDKRTNEEFIKVRNLMIEHEIYNETVNYLSNLENETNKLL 302 Query: 299 RCLP-DSSWKKSLMEVVDFCLQR 320 +P + +K L ++ F L R Sbjct: 303 NKIPVQNIYKDYLFSIMRFILDR 325 >gi|114778283|ref|ZP_01453142.1| octaprenyl-diphosphate synthase [Mariprofundus ferrooxydans PV-1] gi|114551385|gb|EAU53941.1| octaprenyl-diphosphate synthase [Mariprofundus ferrooxydans PV-1] Length = 325 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 121/234 (51%), Positives = 157/234 (67%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ V+ I + + SD+ MIP + Y++ SGGKRLRP+LTL TA + Y+G HV L+ Sbjct: 15 DMQLVDTCIHENLQSDIMMIPAIGHYIVNSGGKRLRPLLTLLTARLFGYQGKRHVPLSVV 74 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTA+LLHDDVVD S RRG +A VWGNQ SVLVGD+L S+AF M++ L Sbjct: 75 VEFIHTASLLHDDVVDSSDQRRGAPSANGVWGNQASVLVGDYLFSRAFQMMVSDGDMVML 134 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + +S V LAEGE+ QLS + +L++TE + L VI+ KTAVLF AA EV + +AG Sbjct: 135 KLMSDVTNALAEGEVLQLSRTFHLEMTEAECLEVIERKTAVLFKAATEVGAHVAGQSAQT 194 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 A+ YGM LG+AFQL+DD LDY E + GK +G D GK TLP+I A QR Sbjct: 195 IAAMAEYGMCLGVAFQLMDDALDYLAEAEDAGKPVGHDLEEGKITLPLIHAMQR 248 >gi|262190890|ref|ZP_06049107.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae CT 5369-93] gi|262033217|gb|EEY51738.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae CT 5369-93] Length = 274 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 112/273 (41%), Positives = 161/273 (58%), Gaps = 1/273 (0%) Query: 48 MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107 ML + +A L Y+G +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SV Sbjct: 1 MLAVLSAKALGYQGAHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASV 60 Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 LVGDF+ +++F M+ E S + L+ +S +AEGE++QL + D TE Y+ VI S Sbjct: 61 LVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYS 120 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KTA LF AA ++ +++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+ Sbjct: 121 KTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGD 180 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287 D GKPTLP++ A Q G + + I + L + M + +L T +A Sbjct: 181 DLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKA 239 Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 KA L LP+S +K++L+ + + R Sbjct: 240 QYEADKAIAELAVLPESEYKQALITLAHMAVNR 272 >gi|28198534|ref|NP_778848.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1] gi|71274823|ref|ZP_00651111.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon] gi|71902480|ref|ZP_00684417.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1] gi|170729932|ref|YP_001775365.1| trans-hexaprenyltranstransferase [Xylella fastidiosa M12] gi|182681213|ref|YP_001829373.1| polyprenyl synthetase [Xylella fastidiosa M23] gi|28056618|gb|AAO28497.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1] gi|71164555|gb|EAO14269.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon] gi|71727796|gb|EAO30052.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1] gi|167964725|gb|ACA11735.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa M12] gi|182631323|gb|ACB92099.1| Polyprenyl synthetase [Xylella fastidiosa M23] Length = 333 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 181/320 (56%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ DM ++ LI R+ SD+ +I + ++I SGGKRLRPMLT+ + Sbjct: 14 LPQIQSFAASDMAAIDTLIHDRLTSDIVLINQIADHIICSGGKRLRPMLTMLAGHAIGPT 73 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA IEFIHTATLLHDDVVD S LRR + A +WGN SVLVGDFL S++F + Sbjct: 74 GPHHHQLAAIIEFIHTATLLHDDVVDGSELRRSRSTANALWGNAPSVLVGDFLYSRSFQL 133 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + E ++ L+ ++EGE+ QL N D E YL VI+ KTA+LF+AA ++ Sbjct: 134 MTELANLEVMQILAETTNRISEGEVLQLLHVHNPDTDETTYLSVIERKTAILFAAAAQLG 193 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L + + + YGM LG AFQ+ DDVLDY +++GKN+G+D GK TLPVI Sbjct: 194 ALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGKNLGDDLAEGKATLPVIH 253 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + I+ G + + + +R +L + RA +Y A+ +L Sbjct: 254 AMTHSDAATCERLRMIISKGD--SDAMPEVLNAIRTTGSLDYSRQRASAYAATAERALDG 311 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ +L + + +QR Sbjct: 312 LPETEAVAALRGLARYAVQR 331 >gi|71066129|ref|YP_264856.1| octaprenyl-diphosphate synthase [Psychrobacter arcticus 273-4] gi|71039114|gb|AAZ19422.1| probable octaprenyl-diphosphate synthase [Psychrobacter arcticus 273-4] Length = 349 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 115/322 (35%), Positives = 188/322 (58%), Gaps = 7/322 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ + D E ++ + + S V+++ +V +++I +GGKR+RP++TL A M Sbjct: 30 IQSIVADDFEIMDKQVFGSLNSKVQLVMNVSQHVINAGGKRMRPLITLLCARMFNDEPSQ 89 Query: 64 HVL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + LA E +HTATL+HDDV+D+S RRGK A W N T+VLVGD+L+++AF +++ Sbjct: 90 QAMHLAAITEMLHTATLVHDDVIDESGQRRGKATANATWDNATAVLVGDYLIARAFNLLV 149 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +S L+ S C +AEGE+ QL N + TE+DYL++I KT+ LF A + +++ Sbjct: 150 GFQSLPLLQVFSDGTCDIAEGEVLQLQHQHNPEATEQDYLNIIDGKTSRLFMMATQGAAI 209 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + G Q QAL +G + G AFQ++DDVLDY G+ MGKN+G+D GKPTLP I A Sbjct: 210 LQG-QIQHLQALADFGQHFGNAFQIIDDVLDYSGDSELMGKNLGDDLAEGKPTLPTIKAL 268 Query: 243 Q---RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + K + + + GK N ++ ++R + +L + RA + A+ +L Sbjct: 269 ELLKDSNKEDYEQLRIAVQTGK--TPNAEQLIALVRHSGSLEYCKQRALEETKLAQQALS 326 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 LPD+ +++ L ++ + RL Sbjct: 327 SLPDNRYRQGLYQLTELASARL 348 >gi|93006580|ref|YP_581017.1| trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5] gi|92394258|gb|ABE75533.1| Trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5] Length = 344 Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 116/322 (36%), Positives = 190/322 (59%), Gaps = 7/322 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ + D + ++ + + S V+++ +V +++I +GGKR+RP++TL A ML Sbjct: 25 IQSIVADDFDIMDKQVFGSLNSKVKLVMNVSQHVINAGGKRMRPLITLLCARMLNDEPSK 84 Query: 64 HVL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + LA E +HTATL+HDDV+D+S RRGK A W N T+VLVGD+L+++AF +++ Sbjct: 85 QAMHLAAITEMLHTATLVHDDVIDESGQRRGKPTANATWDNATAVLVGDYLIARAFNLLV 144 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +S L+ S C +AEGE+ QL N + TE+DYL++I KT+ LF A + +++ Sbjct: 145 GFQSLPLLQVFSDGTCDIAEGEVLQLQHQHNPEATEQDYLNIIDGKTSRLFMMATQGAAI 204 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + G Q QAL ++G + G AFQ+VDDVLDY G+ MGKN+G+D GKPTLP I A Sbjct: 205 LQG-QTQHLQALANFGQHFGNAFQIVDDVLDYSGDSALMGKNLGDDLAEGKPTLPTIKAL 263 Query: 243 QRGTKREKNFWKS---TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + K ++ + GK N ++ ++R + +L + RA + A+ +L Sbjct: 264 ELLKDSNKEGYEQLRIAVQTGK--TPNAEQLIALVRHSGSLDYCKQRALEETKLAQQALS 321 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 LPD+ +++ L ++ + RL Sbjct: 322 SLPDNRYRQGLYQLTELASARL 343 >gi|213021975|ref|ZP_03336422.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 226 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 149/224 (66%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 ++AG + L+ YG LG AFQL+DD+LDY E + GKN Sbjct: 183 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSAEASIYGKN 226 >gi|119502964|ref|ZP_01625049.1| Conserved hypothetical phage tail region protein [marine gamma proteobacterium HTCC2080] gi|119461310|gb|EAW42400.1| Conserved hypothetical phage tail region protein [marine gamma proteobacterium HTCC2080] Length = 321 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 118/310 (38%), Positives = 186/310 (60%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 + ++VN LI++++ SDV M+ +V Y++ +GGKRLRP+L L A + + A Sbjct: 12 EFQQVNELIIEQLKSDVAMVENVGHYIVDAGGKRLRPLLALLAASAQGGVDLSDIKFAAV 71 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD S+LRRG+ A +GN SVLVGDF+ ++AF ++++ L Sbjct: 72 VEFIHTATLLHDDVVDLSSLRRGRATANAEFGNAPSVLVGDFIYTRAFQLMVKLGDLSLL 131 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++++ T+A GE+ QL + + VTE YL VI KTA LF+AA S+++ G + Sbjct: 132 QSMADTTNTIAAGEVLQLMRAGDPSVTESQYLDVIDRKTAALFAAACRGSAILKGRDTTQ 191 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++ + +YG +LGIAFQ++DDVLDY G+ GK +G+D GKPTLP+I G+ + Sbjct: 192 QEQMAAYGRHLGIAFQMIDDVLDYTGDPQVTGKQVGDDLNEGKPTLPLIHTMASGSADDA 251 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + ++ + + ENL +R + + T +A + Q A +L+ L S ++L Sbjct: 252 AIVRDALS--QKNSENLTGVIAAVRRSGGIDYTREQAVLHQQSALAALKGLDRSPALEAL 309 Query: 311 MEVVDFCLQR 320 E+ D + R Sbjct: 310 HELADMAINR 319 >gi|198284597|ref|YP_002220918.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665678|ref|YP_002427267.1| octaprenyl-diphosphate synthase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249118|gb|ACH84711.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517891|gb|ACK78477.1| octaprenyl-diphosphate synthase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 322 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 111/258 (43%), Positives = 153/258 (59%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM VN +I +++ S V IP + YLI +GGKRLRP++ L A M RG + Sbjct: 9 LVRADMAAVNSVIQEQLRSGVPTIPAMGTYLINAGGKRLRPIVLLLAARMGGERGPRPIS 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD S LRR A WGN +VLVGDFL +++F M+++ Sbjct: 69 LAAVVEFIHTATLLHDDVVDGSELRRSNATANQRWGNAAAVLVGDFLYARSFEMMVQDGD 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L ++ +A+GE+ QL + + D++ E Y VI++KTA LF AA + +L+ + Sbjct: 129 MRILATMAEATSVIAQGEVAQLENANDPDLSPEAYFAVIEAKTAKLFEAAARIGALVNEL 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +AL YG LGIAFQL+DD LDY +MGKN G+D GK TLP I A Q T Sbjct: 189 DAAAEKALAQYGSLLGIAFQLMDDALDYSTSAEKMGKNRGDDLAEGKATLPYIHAMQHAT 248 Query: 247 KREKNFWKSTINDGKISV 264 E+ + ++ +V Sbjct: 249 AAEQAILREALSGNAPAV 266 >gi|226196886|ref|ZP_03792465.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pakistan 9] gi|225931146|gb|EEH27154.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pakistan 9] Length = 278 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 112/249 (44%), Positives = 152/249 (61%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 ME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L + +LA + Sbjct: 1 MEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQKHVLAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ +E Sbjct: 61 EFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRVME 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 121 ILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 181 AAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTPEQST 240 Query: 252 FWKSTINDG 260 + I G Sbjct: 241 LAREAIEHG 249 >gi|308270513|emb|CBX27125.1| hypothetical protein N47_A11540 [uncultured Desulfobacterium sp.] Length = 326 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 106/311 (34%), Positives = 180/311 (57%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KD+ ++ + + ++++ DV K+++F+GGKRLRP+L + +A + Y+G + + Sbjct: 14 KDLAEIEVALTDNLTPYLDIVSDVAKHILFAGGKRLRPLLMVLSARICNYKGGYDKVFST 73 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E++H ATLLHDDV+D + LRRGK A +W N T VL GDFLL++ + T+ Sbjct: 74 IFEYLHAATLLHDDVIDGAELRRGKPVANSIWKNSTVVLTGDFLLARGLSIAAATEKPSV 133 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ ++ + +++GE+ QL ++++TEE+Y +I KTAVLF A +S+ +A Sbjct: 134 IKIVAEITENMSQGEIEQLLRKGDINLTEEEYRKIIWRKTAVLFQGACRISARLANASKR 193 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +A+ +YG NLG+AFQ+ DD+LDY + +GK +G D + GK TLPVI A + ++ Sbjct: 194 EEKAVSNYGYNLGMAFQMADDLLDYTLDTKVIGKGVGADLKEGKVTLPVIHALKEADSKD 253 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + I + K SV N ++ + + TE A + ++AK+SL S + Sbjct: 254 RLKMERIIKNNKFSVRNFNSLIKLLEKYEGISYTEKCAKDHIKEAKESLLVFEPSETRNI 313 Query: 310 LMEVVDFCLQR 320 L + D+ L R Sbjct: 314 LEYIADYTLLR 324 >gi|167580495|ref|ZP_02373369.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis TXDOH] Length = 297 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 115/250 (46%), Positives = 154/250 (61%), Gaps = 2/250 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACA 70 ME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L E+ HVL A Sbjct: 1 MEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGEHTSQKHVL-AAV 59 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ + Sbjct: 60 VEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRVM 119 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 120 EILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPT 179 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 180 EAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTPEQS 239 Query: 251 NFWKSTINDG 260 + I G Sbjct: 240 TLAREAIEHG 249 >gi|116749021|ref|YP_845708.1| trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans MPOB] gi|116698085|gb|ABK17273.1| Trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans MPOB] Length = 323 Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 123/310 (39%), Positives = 183/310 (59%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ ++ I + + V +I V +Y++ SGGKRLRP+L + +A + Y+G + LA Sbjct: 12 DLRRIEEEIELLLTTSVPLISVVGRYIMGSGGKRLRPLLLVLSARLCGYQGSHDASLAVV 71 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 EFIH A+LLHDDVVD + RR + AA VWGNQ VLVGDFL S+A + + S L Sbjct: 72 FEFIHAASLLHDDVVDHAKFRRNRPAANTVWGNQAVVLVGDFLYSKAIHLTVGYNSLRML 131 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS ++EGE+ QL + N++++EE+Y+ VI KTAVL SAA ++ +L G Sbjct: 132 EVLSEATTRMSEGEVLQLVHADNIEISEEEYIEVITRKTAVLISAACQIGALFGGNDVQR 191 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +ALK+YG NLGIAFQLVDD LDY G+V E+GK +G D + GK TLP+I A + G ++ Sbjct: 192 EKALKTYGHNLGIAFQLVDDTLDYTGDVKELGKPVGNDIQEGKATLPLICALRNGKPGDR 251 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + ++ E+ + ++ + L T A + Q AK +L P + L Sbjct: 252 ARLREVFSSEQLRKEDFAEIKELVTRSGGLDYTLRLASRHIQTAKQALDIFPPHPTRDLL 311 Query: 311 MEVVDFCLQR 320 ++ D+ + R Sbjct: 312 SDIADYVICR 321 >gi|254516949|ref|ZP_05129007.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3] gi|219674454|gb|EED30822.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3] Length = 320 Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 119/305 (39%), Positives = 186/305 (60%), Gaps = 2/305 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + + +++ VN +I++++ SDV+M+ +V +Y++ +GGKRLRP+L L ++ L Sbjct: 1 MQQVRAVVSAELDAVNAVIIEQLRSDVDMVENVGQYIVDAGGKRLRPVLVLLSSAALGPI 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D + A +EFIHTATLLHDDVVD S LRRG+ A +GN SVLVGDFL ++AF + Sbjct: 61 SDAQIHFAAVVEFIHTATLLHDDVVDVSELRRGRPTANSAFGNAPSVLVGDFLYTRAFQL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + L+ ++ T+A GE+ QL + + +EE Y VI KTA LF+A E + Sbjct: 121 MVALGNHDVLKMMADTTNTIAAGEVLQLIRAGDAATSEEQYYDVIDRKTAALFAAGCEGA 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+AG + + L+ G ++GIAFQL+DD+LDY G+ GKN+G+D GKPTLP+I Sbjct: 181 ALLAGADAARVEQLRVCGRSIGIAFQLIDDLLDYEGDPEVTGKNVGDDLAEGKPTLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G++ + N + IN + L + +R+ +L T A KA +L+ Sbjct: 241 VMREGSEAQANLVRDAINAKDRA--RLPEIIQAVRDCGSLEYTRNAALDCRDKALKALKE 298 Query: 301 LPDSS 305 LPDS Sbjct: 299 LPDSP 303 >gi|307579659|gb|ADN63628.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 309 Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 121/309 (39%), Positives = 177/309 (57%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M ++ LI R+ SD+ +I + ++I SGGKRLRPMLT+ + G +H LA I Sbjct: 1 MAAIDTLIHDRLTSDIVLINQIADHIICSGGKRLRPMLTMLAGHAIGPTGPHHHQLAAII 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD S LRR + A +WGN SVLVGDFL S++F ++ E + E ++ Sbjct: 61 EFIHTATLLHDDVVDGSELRRSRSTANALWGNAPSVLVGDFLYSRSFQLMTELANLEVMQ 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ ++EGE+ QL N D E YL VI+ KTA+LF+AA ++ +L + + Sbjct: 121 ILAETTNRISEGEVLQLLHVHNPDTDETTYLSVIERKTAILFAAAAQLGALASHADTQTQ 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + YGM LG AFQ+ DDVLDY +++GKN+G+D GK TLPVI A Sbjct: 181 TRMYEYGMQLGYAFQITDDVLDYTANNSQLGKNLGDDLAEGKATLPVIHAMTHSDAATCE 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I+ G + + + +R +L + RA +Y A+ +L LP++ +L Sbjct: 241 RLRMIISKGD--SDAMPEVLNAIRTTGSLDYSRQRASAYAATAERALDGLPETEAVAALR 298 Query: 312 EVVDFCLQR 320 + + +QR Sbjct: 299 GLARYAVQR 307 >gi|226941879|ref|YP_002796953.1| IspB [Laribacter hongkongensis HLHK9] gi|226716806|gb|ACO75944.1| IspB [Laribacter hongkongensis HLHK9] Length = 322 Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 183/320 (57%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM V+ +I + + SDV +I V +Y+I +GGKRLRP L + A L + Sbjct: 3 VPLFRQLITDDMLAVDQVIRRSLHSDVVLIRQVAEYIIGAGGKRLRPALLILAARALGCQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G A IE IHTATLLHDDVVD+S RRG+ A ++GN SVLVGDFL ++AF M Sbjct: 63 GPAVHEQAAMIECIHTATLLHDDVVDESDKRRGRDTANAMFGNAASVLVGDFLYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ T S LE ++ +AEGE+ QL N D+TE +YL VI+ KTA LF AA V Sbjct: 123 MVHTHSLRVLEIMAEATNIIAEGEVMQLLNIGNTDLTETEYLQVIQYKTAKLFEAAGRVG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+AG AL YGM+LG AFQ++DDVLDY G+ +GK++G+D GK TLP+I Sbjct: 183 ALLAGATPEQEAALAGYGMHLGTAFQIIDDVLDYSGDAATIGKSLGDDLAEGKTTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q G+ + + + E ++ AL +A + Q+A +L Sbjct: 243 VMQHGSPDQAAVVRGALQ--AADRERFDAVLSAVQSTPALDYAHGQAVAAAQRAVAALAG 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +++L E+ ++R Sbjct: 301 LPDSEARQALTELALLSVER 320 >gi|224371856|ref|YP_002606022.1| IspB [Desulfobacterium autotrophicum HRM2] gi|223694575|gb|ACN17858.1| IspB [Desulfobacterium autotrophicum HRM2] Length = 327 Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 180/311 (57%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D+ + + + +++++ + +L+FSGGKRLRP+L L ++ + Y GD + ++ Sbjct: 15 EDLTAIEGALATNLRPNLDLVRQIAGHLLFSGGKRLRPLLFLLSSRLCNYGGDLALDVST 74 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E++H ATLLHDDVVD++ +RRG+ A WG VL GDFLL+++ C+ T E Sbjct: 75 LFEYLHAATLLHDDVVDEAEMRRGRKTAHSTWGAAQVVLTGDFLLARSLCLAARTGRPEI 134 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + +S + +++GE+ QL L+++E +Y+ +IK KTAVL A ++++ Sbjct: 135 INVISGITEEMSQGEIDQLDKKGKLNLSEAEYMAIIKGKTAVLIQGACRSGAILSRAPAD 194 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 QAL YG +LG+AFQ+ DD+LDY + +GKN G D R GK TLP+ILA +R + Sbjct: 195 REQALADYGYHLGMAFQMADDLLDYTADAATLGKNPGADLREGKLTLPLILALERADGPD 254 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 +++ +S I+ + ++ K + + + DT+ RA + +AK L D K + Sbjct: 255 RSWMESVISTQGFNDDDFYKLVEKLHLYKGIDDTQSRAEHHVDQAKKCLEPFDDCGAKDT 314 Query: 310 LMEVVDFCLQR 320 ++ + D+ + R Sbjct: 315 MIMLSDYAIAR 325 >gi|225849175|ref|YP_002729339.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644434|gb|ACN99484.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense Az-Fu1] Length = 317 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 116/311 (37%), Positives = 187/311 (60%), Gaps = 1/311 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLAC 69 D EKV + K + S V+ I V Y++ GGKR+RP L L A M+ Y + +LA Sbjct: 5 DKEKVESTLRKYLDSSVDFILQVGGYILDGGGKRVRPYLVLKFASMIRGYNKEEDYILAS 64 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+E++HTA+LLHDDVVD+S RRG++ A V+GN T+VLVGD++ + A + + Sbjct: 65 ALEYLHTASLLHDDVVDESEKRRGRLTANRVFGNDTTVLVGDYMYANALYLFSIYGDIDM 124 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ +S +AEG+L +L N D T +DY ++ KTAVLF + V + +A + Sbjct: 125 IKNVSDSVKKMAEGQLLELKKIANFDTTFDDYYKIVLGKTAVLFGSCCYVGTALASEDKN 184 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +++ YG+NLG+AFQ+VDD+LDY G+ ++GK++ D + GK T P+++ K + Sbjct: 185 LKENAYQYGVNLGVAFQIVDDILDYEGDEEKVGKSLMNDLKEGKITYPLLVVKDILNKED 244 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 K+F KS + D SVE+L KA I+ + + + A SY +KA ++L+ PD+ K+ Sbjct: 245 KDFIKSVVLDKNPSVESLLKAKKIVEDYGGIEKAKADAESYVRKAIENLKDFPDNKDKQD 304 Query: 310 LMEVVDFCLQR 320 L+ + + ++R Sbjct: 305 LINLAHYIVKR 315 >gi|145628195|ref|ZP_01783996.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 22.1-21] gi|144979970|gb|EDJ89629.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 22.1-21] Length = 274 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 108/273 (39%), Positives = 165/273 (60%), Gaps = 1/273 (0%) Query: 48 MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107 M+ + A L + G N + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SV Sbjct: 1 MIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASV 60 Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 LVGDF+ ++AF +V + +S + L ++ LAEGE++QL + + +E +Y+ VI S Sbjct: 61 LVGDFIYTRAFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYS 120 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KTA LF A + ++++AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+ Sbjct: 121 KTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGD 180 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287 D GKPTLP++ A + G ++ + I G E + + IM E+++L RA Sbjct: 181 DLAEGKPTLPLLHAMRHGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRA 239 Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 QKA D++ LP+S +K++L+ + + R Sbjct: 240 KEEAQKAVDAIEILPESEYKQALISLAYLSVDR 272 >gi|145588381|ref|YP_001154978.1| farnesyltranstransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046787|gb|ABP33414.1| Farnesyltranstransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 334 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 115/302 (38%), Positives = 174/302 (57%), Gaps = 3/302 (0%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVL-LACAIEFIHTATL 79 R+ S V +I + Y+I +GGKR+RP +L L + + H L +A +EFIHTATL Sbjct: 31 RLASKVALIDQISTYIIQAGGKRVRPALLMLVAKALANGKESAHTLEMAAVVEFIHTATL 90 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 LHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M++ ++ LS T Sbjct: 91 LHDDVVDESTLRRGRETANAAFGNAASVLVGDFLYSRAFQMMVAPNDLRVMQILSDATNT 150 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 +AEGE+ QL + +V E YL VI+ KTA LF A+ E+ +++A +S R+ ++G Sbjct: 151 IAEGEVLQLLNMNDPEVDEASYLQVIRYKTAKLFEASTELGAILASATDSQREQAAAFGR 210 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G AFQL+DD+LDY +MGKN G+D R GKPTLP+I + G+ E+ ++ I Sbjct: 211 HIGTAFQLMDDLLDYTANAAQMGKNAGDDLREGKPTLPLIYLLENGSNEERLLVRAAIEQ 270 Query: 260 GKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E++ + ++ +D T+ A A D + P + +L ++ + L Sbjct: 271 NQDLPEDVFAQILGAVQSSGALDYTQAVAKREADLALDCISEFPSNEATTALRDLCTYSL 330 Query: 319 QR 320 R Sbjct: 331 AR 332 >gi|15837992|ref|NP_298680.1| octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c] gi|9106399|gb|AAF84200.1|AE003970_7 octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c] Length = 332 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 180/320 (56%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ DM ++ LI R+ SD+ +I + ++I SGGKRLRPMLT+ + Sbjct: 13 LPQIQSFAASDMAAIDTLIHDRLTSDIVLINQIADHIICSGGKRLRPMLTMLAGHAIGPT 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA IEFIHTATLLHDDVVD S LRR + A +WGN SVLVGDFL S++F + Sbjct: 73 GPHHHQLAAIIEFIHTATLLHDDVVDGSELRRSRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + E ++ L+ ++EGE+ QL N D E YL VI+ KTA+LF+AA ++ Sbjct: 133 MTELANLEVMQILAETTNRISEGEVLQLLHVHNPDTDETTYLRVIERKTAILFAAAAQLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L + + + YGM LG AFQ+ DDVLDY +++GKN+G+D GK TLPVI Sbjct: 193 ALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGKNLGDDLAEGKATLPVIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + I+ G + + + +R +L + RA +Y A+ +L Sbjct: 253 AMTHSDAATCERLRMIISKGD--RDAMPEVLNAIRTTGSLDYSRQRASAYAATAERALDG 310 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L ++ +L + + +QR Sbjct: 311 LLETEAVAALRGLARYAIQR 330 >gi|251772722|gb|EES53284.1| trans-hexaprenyltranstransferase [Leptospirillum ferrodiazotrophum] Length = 332 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 103/294 (35%), Positives = 173/294 (58%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 V + ++ Y++ GGKRLRP+L + ++ + G +LLA +E IHTATLLHDDVVD Sbjct: 37 VPLASEMTSYVVSGGGKRLRPLLMVISSRLSGAEGPEPILLAAVVEMIHTATLLHDDVVD 96 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 ++ +RRGK AA WGNQ ++LVGDFL + + + + S E ++L+L ++EGE+ Sbjct: 97 NADVRRGKKAAHQRWGNQPAILVGDFLYANSLWLAMGLHSHEVNDSLTLACKKMSEGEIL 156 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 +L L NL+ TE+ Y +V KTA L ++ + ++ G+ + ++AL +G +G+AFQ Sbjct: 157 ELFLDGNLEATEDQYYNVAACKTATLTASTCRLGGILGGLSDEEKEALDRFGYYVGMAFQ 216 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 + DD LDY ++GK +G D GK TLP+I + ++ + + G+I + Sbjct: 217 VADDALDYMASEEKLGKTLGRDLSEGKMTLPLIHCLATSSAESRSRLVTKVGSGEIRNGD 276 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 L + +M++ ++ + RA + +KA++SL C S K+ L+ + DF + R Sbjct: 277 LDEVLRLMKDTGSIEYSLGRAREFTRKAQESLECFSHSLPKQHLLALSDFVISR 330 >gi|254508603|ref|ZP_05120719.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 16] gi|219548454|gb|EED25463.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 16] Length = 260 Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 108/257 (42%), Positives = 152/257 (59%), Gaps = 1/257 (0%) Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ E Sbjct: 3 HTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMMTE 62 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF AA ++ +++ Sbjct: 63 LGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEEIYMDVIYSKTARLFEAATQIGAIL 122 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 V AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A + Sbjct: 123 NDAPEDVETALQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYAMR 182 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G + + I +E L + M E +L T +AY KA L L + Sbjct: 183 HGNDAQVAMIREAIEKAN-GMEKLTEILAAMEETGSLEYTRQKAYQEADKAIAELSVLEE 241 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 242 SEYKQALVTLAHMAVHR 258 >gi|118595231|ref|ZP_01552578.1| trans-hexaprenyltranstransferase [Methylophilales bacterium HTCC2181] gi|118441009|gb|EAV47636.1| trans-hexaprenyltranstransferase [Methylophilales bacterium HTCC2181] Length = 321 Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 116/310 (37%), Positives = 174/310 (56%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ +VN +I K + S++ ++ + ++I SGGKR+RP + L A + +H +A Sbjct: 12 DLNEVNNVIRKSLFSEIPIVNQISNHIINSGGKRMRPSIHLLFAKLTGEINTSHHAMAAI 71 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEFIHTATLLHDDVVD S RR K A ++GN +SVLVGDF+ S++F M+ + + E + Sbjct: 72 IEFIHTATLLHDDVVDQSTQRRSKKTANALFGNSSSVLVGDFIYSRSFQMMTKINNMEVM 131 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E L+ ++EGE+ QL +KN D++E DY VI KTA LF + ++ ++ V Sbjct: 132 EILADATNAISEGEILQLLNTKNPDLSENDYFQVIGFKTAKLFESCGSLAGVLNEVDQEK 191 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++ L G GI FQL DD+LDY G+ EMGKNIG+D GK TLP+I A Q G+ + Sbjct: 192 QKDLAKLGNIFGIMFQLTDDILDYSGKEIEMGKNIGDDLTEGKVTLPLIYAMQNGSDTQG 251 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 K I G I+ L I+ + A+ E + + L +K+L Sbjct: 252 KLIKEAIKIGDIN--RLPDIIQILSDTNAIATVEKHLVQKVIEVNEVLGRFDKGEARKTL 309 Query: 311 MEVVDFCLQR 320 + ++ L+R Sbjct: 310 SSLANYILER 319 >gi|320106552|ref|YP_004182142.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4] gi|319925073|gb|ADV82148.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4] Length = 329 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 113/315 (35%), Positives = 178/315 (56%), Gaps = 1/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL D+ V ++ S+V +I ++ +YL+ GGKR+RP+L L +A L +RG++ + Sbjct: 14 DLLRDDLAAVEREFARQSSSEVRVITEIAEYLLAGGGKRIRPLLLLLSAKALHFRGESRI 73 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 L +E +HTATL+HDD++D + RRG+ ++ WGN VL GD+L Q+F + +E + Sbjct: 74 RLGAVVEMLHTATLVHDDIIDAADTRRGRPSSNTAWGNSKCVLAGDWLYMQSFQVAMEER 133 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + L+ L + + EGEL Q+ L + EE+Y +I KTA LF ++++ + IA Sbjct: 134 NFHVLDLLISLTQQMVEGELLQIQKLGRL-INEEEYFDLIFRKTASLFRVSMQLGAAIAD 192 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + L YG NLG+AFQ+VDDVLD E + +GK + D R GK TL VI A +RG Sbjct: 193 APKEIEGQLGEYGRNLGLAFQIVDDVLDLTSEESTLGKPVASDLREGKATLAVIHALERG 252 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T E+ ++ + D + K I++ + +L A +Y + A+ L LPDS Sbjct: 253 TGEEREAIRTVLADRSFNRVPHKTILAILKHHGSLDYAMDAARAYAEVARQCLTDLPDSE 312 Query: 306 WKKSLMEVVDFCLQR 320 K++L+ V F R Sbjct: 313 AKRALLWVPGFVTSR 327 >gi|325295651|ref|YP_004282165.1| trans-hexaprenyltranstransferase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066099|gb|ADY74106.1| Trans-hexaprenyltranstransferase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 324 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 112/315 (35%), Positives = 186/315 (59%), Gaps = 8/315 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +++EK + + S+V ++ Y++ SGGKR+RP LT+ + ++E + + +A Sbjct: 12 EELEKAEECSRELLNSNVRLVLTAGGYILDSGGKRVRPGLTIISGKLVEAPLERLIPVAT 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E++HTATLLHDD+VD + LRRG+++A V+GN +VLVGD++ ++A ++ + Sbjct: 72 VMEYMHTATLLHDDIVDGAKLRRGRLSANEVFGNDVAVLVGDYMFAKAIYILAVYGGDKV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ + +AEGEL QL ++++TEE+Y +I KTA L S EV ++ + Sbjct: 132 LKVAAQTVQEMAEGELLQLEKIGDINLTEEEYFDIIYRKTASLLSTCCEVGGIVGEAREE 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 R+ALK+YG +G AFQLVDD DY + +GK G D R GK T P++ A ++ T+ E Sbjct: 192 ERKALKNYGKFIGYAFQLVDDAFDYISDEKTIGKPAGNDIREGKVTYPLLSALKKATESE 251 Query: 250 KNFWK---STINDGKISVENLKK-AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 K ST+ K +E++++ AF E + +T A Y ++AK+ L P+S Sbjct: 252 KERISQVLSTVEPTKEQIESVRQFAF----EKGGVEETIKLAREYVERAKEVLNVFPESP 307 Query: 306 WKKSLMEVVDFCLQR 320 +K+L E+ DF ++R Sbjct: 308 LRKALFEIADFIVER 322 >gi|218781076|ref|YP_002432394.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01] gi|218762460|gb|ACL04926.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01] Length = 325 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 118/313 (37%), Positives = 176/313 (56%), Gaps = 4/313 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KD+ + + + ++++ DV +L+F+GGKRLRP+L + +A + + L+ Sbjct: 13 KDLADIERALEANLNPYLDLVRDVASHLLFAGGKRLRPVLMVLSARVCGCNNGEEINLST 72 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E++H ATLLHDD+VD + RRGK+AA VW VL GDFLLS+ + +T Sbjct: 73 VFEYLHAATLLHDDIVDGAETRRGKIAAHKVWDPAEVVLTGDFLLSRTCTIAADTDKLPI 132 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ ++ V ++EGE++QL K LD++EE Y+ VI KTAVL SAA EV +L+A Sbjct: 133 IKVITNVTGVMSEGEIQQLLNKKRLDLSEEQYMDVIYRKTAVLISAACEVGALLADAPPE 192 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +ALK YG +LGIAFQ+ DD+LDY + GK IG D GK TLP+I A ++ Sbjct: 193 QVEALKEYGRHLGIAFQMADDLLDYVADPKVTGKAIGADLAEGKLTLPLIHALEQTGSET 252 Query: 250 KNFWKSTINDGKISVENLKKAFII--MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I D S E+ AF++ + ++ + T +A + AK L PD K Sbjct: 253 RPRMEKIILDENASKEDF--AFVLDNIIKSGGVDYTNQKAQEHVAAAKALLDIFPDCPEK 310 Query: 308 KSLMEVVDFCLQR 320 L +V DF QR Sbjct: 311 DVLAKVADFAAQR 323 >gi|225631093|ref|ZP_03787822.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591208|gb|EEH12361.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 264 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 99/265 (37%), Positives = 157/265 (59%), Gaps = 3/265 (1%) Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 ML Y G+N + +A ++EFIH ATLLHDDV+D+S R G A +WGN++S+LVGD LL+ Sbjct: 1 MLNYSGENRINVAASVEFIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLT 60 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 AF +IE + L LS + L +GE++Q+ + E+Y +I KTA LFSA Sbjct: 61 LAFRWLIECGNLNILSILSKASHLLVKGEIKQMKARFDPHTVRENYFDIIGEKTASLFSA 120 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 E +S ++G N + LK++G N G+AFQ+VDD+LDY GK +G+DF GK T Sbjct: 121 CCEAASTVSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQGTSGKQVGKDFFEGKVT 180 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 LP I+A+++G+ E+ FW+ + + N +A + + A+ + +A Y A+ Sbjct: 181 LPAIIAYEKGSPAEQTFWEKCFSSAR---HNFDQALHYINHHNAIQLSMEKARHYINMAQ 237 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320 + + DS +K +L+ ++ ++R Sbjct: 238 NDISTFSDSFYKTTLINFLNASIER 262 >gi|78042835|ref|YP_360049.1| heptaprenyl diphosphate synthase component II [Carboxydothermus hydrogenoformans Z-2901] gi|77994950|gb|ABB13849.1| heptaprenyl diphosphate synthase component II [Carboxydothermus hydrogenoformans Z-2901] Length = 326 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 111/319 (34%), Positives = 185/319 (57%), Gaps = 3/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K L +L +D+ K+ ++K + E + D +L+ +GGKRLRP L A + +Y Sbjct: 9 KKLFELVKEDLRKIEQELIKEVSERNEFLHDPAMHLLKAGGKRLRPAFALLAAKLGDYDF 68 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + LA A+E IH ATL+HDDVVD+S LRRG + WGN+ S+ +GD + +++ ++ Sbjct: 69 EKVKPLAVALELIHMATLVHDDVVDNSMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLI 128 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 K+ + L+ V+ + GE++QL+ +KN+ + +DYL IK KTA+L SA+ E+ Sbjct: 129 DSCKNNYVAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCELGG 188 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A V V ALK YG+ +G+AFQ++DD+LD+ + +GK +G D R G TLPV+LA Sbjct: 189 VMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLA 248 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 +R K E W+ N + + N+++ ++ + + A +Y +KA + + Sbjct: 249 LKRDKKHE--LWRELQNLPQNNA-NIEQIIKEIKYLGGISEAYAWAKNYIEKAISAFELV 305 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P S K + +E+ F +QR Sbjct: 306 PKSPVKDTFLEIAQFIVQR 324 >gi|255624003|ref|XP_002540427.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223495850|gb|EEF21956.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 263 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 112/233 (48%), Positives = 150/233 (64%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 V ++ ++ Y++ +GGKRLRP+L L A L H+ LA IEFIHTATLLHDDVVD Sbjct: 1 VPLVENIGHYIVDAGGKRLRPLLVLLVAGALGPIRQEHITLAGIIEFIHTATLLHDDVVD 60 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 S+LRRG+ A WGN SVLVGDFL S+AF +++E S + ++ T+AEGE+ Sbjct: 61 ISSLRRGRATANAKWGNAPSVLVGDFLYSRAFQLLVELGSMPLMSLMADTTNTIAEGEVL 120 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 QL+ + + EE Y VI+SKTAVLF+AA E +++++G + YG+NLG AFQ Sbjct: 121 QLTKAGDPATDEEAYFSVIESKTAVLFAAATEGAAILSGASTEDAARWRRYGLNLGNAFQ 180 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 L DDVLDY G+ +MGKNIG+D GKPTLP+I Q GT ++ I D Sbjct: 181 LADDVLDYLGDPEKMGKNIGDDLAEGKPTLPLIRTLQVGTPADQILVSQAITD 233 >gi|116622453|ref|YP_824609.1| geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076] gi|116225615|gb|ABJ84324.1| Geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076] Length = 333 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 173/315 (54%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL D+E+V I + V+ + + +YL +GGKRLRP L L +A ++ G + + Sbjct: 17 DLIQDDLEQVEKKITAESVASVDAVTAIGQYLQSAGGKRLRPALLLLSAKLVGNGGPSAI 76 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 L +E IH ATL+HDDV+D + RRG+ + + WGN T VL GD+L QAF + + + Sbjct: 77 QLGAVVELIHAATLVHDDVIDTAQTRRGRPSTNVKWGNHTCVLAGDWLYMQAFQIALRER 136 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S + L+ L + + EGEL QL ++V+E D + ++ KTA LFS + L Sbjct: 137 SFQMLDLLIGLTQMMVEGELLQLERIGRINVSEADCMELVDRKTACLFSVCARLGGLCGH 196 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 ++ L Y NLG+AFQLVDDVLD+ +GK +G D R GK TLP++ A +R Sbjct: 197 TDPQTQEKLGEYAWNLGMAFQLVDDVLDFTSREKVLGKPVGGDLREGKVTLPLVYALERA 256 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 E+ ++ + D ++ ++ + + + + RA ++ KA+ ++ P+S Sbjct: 257 APEERKLVETILEDRTYDRVPFQRILALLEKYQGIERVKERAQAFTDKARQTIAEFPESP 316 Query: 306 WKKSLMEVVDFCLQR 320 ++++L+ V + +R Sbjct: 317 YQRALLAVTELVTER 331 >gi|319941776|ref|ZP_08016098.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B] gi|319804709|gb|EFW01576.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B] Length = 332 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 113/310 (36%), Positives = 177/310 (57%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ V+ I + SDV + ++ +Y+ +GGKR+RP L + + L Y+GD L Sbjct: 24 DMKAVDDYIRAELASDVSRMHEISEYITSAGGKRMRPALLILISRALGYKGDLCCYLGAT 83 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +HTATL+HDDVVD+S LRRG+ A WGN +VLVGDFL +++F M++ + + Sbjct: 84 IELLHTATLMHDDVVDESNLRRGRPTANARWGNGAAVLVGDFLYTRSFQMMVRAGNLRVM 143 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +AL+ A L+EGE+ Q+ + + V E Y VI+ KTA LF A +++ IA Sbjct: 144 QALADAANRLSEGEVVQMVNAHDPSVDETRYFRVIERKTACLFEAGARMAAAIAECSKEQ 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A+ Y + LG AFQ+ DD+LDY G ++GKN+G D R GK TLP+I + T + Sbjct: 204 EEAVAQYALALGNAFQIADDILDYTGVAADIGKNLGADLREGKMTLPLIYTRELTTPEGR 263 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + G + + K + + AL RA + ++ + +L LP S + +SL Sbjct: 264 ALIDEAVRKGDGPFDKITKLVV---DCGALDRCSLRAEAELERGRQALAKLPPSIFNESL 320 Query: 311 MEVVDFCLQR 320 +E++ F ++R Sbjct: 321 LELLSFTVRR 330 >gi|302341992|ref|YP_003806521.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075] gi|301638605|gb|ADK83927.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075] Length = 348 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 109/298 (36%), Positives = 174/298 (58%), Gaps = 5/298 (1%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 V I +V Y+IFSGGKRLRP+L + A + GD A E++H ATLLHDDV+D Sbjct: 54 VPFIKEVSDYIIFSGGKRLRPVLFMLAAQAVGGAGD--FRRAAIFEYLHAATLLHDDVID 111 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 ++ LRRG+ AAR ++GN+ +LVGDFL S+++ + E ++AL+ +AEG++ Sbjct: 112 EAGLRRGRPAARKLYGNEAVILVGDFLFSKSYSLAAEEPDHRFIQALTDCTTHMAEGQVL 171 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 +L + +L+++ + YL VI +KTAVL +AA ++ ++ AG V AL YG++LG+AFQ Sbjct: 172 ELLRTDDLELSRQKYLEVIVAKTAVLLAAACQMGAIHAGASPEVENALYRYGLSLGVAFQ 231 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 LVDD LDY G+ +E GK +G D GK TLP+I + + + + Sbjct: 232 LVDDALDYVGQEHEFGKPVGHDLAEGKITLPLIHVRDAADAQARQRLLGLARASRADRQA 291 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSSWKKSLMEVVDFCLQRLN 322 L +A ++ + + T +A Y + A+ +L LP + +W ++L + + + R N Sbjct: 292 LAQAKELIVQGGGVAHTFAQARRYARHAQQALEELPAANDAW-QTLFALPHYVVNRRN 348 >gi|313672526|ref|YP_004050637.1| polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312939282|gb|ADR18474.1| Polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 323 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 108/305 (35%), Positives = 182/305 (59%), Gaps = 11/305 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + SDVEM+ +V Y+ SGGKRLRP+ ++ + Y G+ V+L+ +E+IHTATLL Sbjct: 23 KNLDSDVEMVNEVAYYVFESGGKRLRPIFMFLSSGLGGYTGNRDVILSGVVEYIHTATLL 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + RRG+ +A +GN +VL GDFL S+AF +++ + L+ A T+ Sbjct: 83 HDDVIDGAKFRRGRPSANQAFGNDITVLCGDFLYSRAFVNLVKDGDPKVQMILANAAKTM 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +EGE+ QL + N +++ E+Y +I SKTAVLFSA E+ +++AG + + +G Sbjct: 143 SEGEVFQLVKTANFNLSFEEYNKIIFSKTAVLFSACCEIGAMLAGFDGERVKMMAEFGKI 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE----KNFWKST 256 +G++FQ+ DD+LDY G+ + GK G D + GK TLP++L + E K+ S Sbjct: 203 VGLSFQMSDDILDYLGDPAKTGKKPGTDLKEGKMTLPMLLLRDLANESELMKMKDIIASD 262 Query: 257 INDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 ++ I+ + +L + + + + + VD SY + A+D L PD+ ++++L + + Sbjct: 263 PDENDITYIIDLMERYDVKSKAESFVD------SYTKSARDLLSSFPDNEYRRALEFLSE 316 Query: 316 FCLQR 320 + + R Sbjct: 317 YVILR 321 >gi|323704336|ref|ZP_08115915.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536402|gb|EGB26174.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 319 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 110/321 (34%), Positives = 183/321 (57%), Gaps = 23/321 (7%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM+K++ IL + ++ I + L+ SGGKR+RP+L +A A M EY + + +A Sbjct: 10 EDMKKIDEFILANVKTNSPTIKKAIDDLVLSGGKRIRPLLVIAIARMGEYSEEKIIPIAA 69 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +IE +H ATL+HDD++DDS +RRG+ + + +G +T+V GDFL SQAF ++ + S+E Sbjct: 70 SIEIMHMATLIHDDIIDDSKMRRGQKSVQSKYGKETAVFTGDFLFSQAFNLIADIISKEN 129 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ ++ + EGE+ Q NLD++ + YL I KTA+LF+ + E + AG+ Sbjct: 130 LKLIAKGVKAICEGEIEQFDNRYNLDLSIKKYLKRIYRKTALLFAISCESGASQAGLPKE 189 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ------ 243 + +A++ +G+ +G AFQ+VDD+LDY G +GK +G D NG TLP+I A + Sbjct: 190 MIRAMRHFGLEIGTAFQIVDDILDYEGVERVVGKPLGSDLLNGIYTLPLIYALKTDRKKV 249 Query: 244 -RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR---AYSYGQKAKDSLR 299 +G R+++ + +N I++E + +Y A Y +KA L Sbjct: 250 IKGILRKRDLSRRDVN-------------CIIKEVKLSGGIDYAKELALKYVKKAVKYLE 296 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 +PD K +M++ D L+R Sbjct: 297 VIPDCEQKSLMMDIADDVLKR 317 >gi|254468498|ref|ZP_05081904.1| octaprenyl-diphosphate synthase [beta proteobacterium KB13] gi|207087308|gb|EDZ64591.1| octaprenyl-diphosphate synthase [beta proteobacterium KB13] Length = 327 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 102/252 (40%), Positives = 158/252 (62%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 ++KVN +I + S+V +I V K++I GGK++RP + A + D H LA + Sbjct: 19 LQKVNDVIRSSLDSEVPLINQVGKHIIDGGGKKMRPQCLINLAGLAGGVKDIHYQLAAIV 78 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVDDS RR A + +GN S+LVGDF+ S++F M++E + E ++ Sbjct: 79 EFIHTATLLHDDVVDDSDTRRSSPTANIQFGNSASILVGDFIYSRSFQMMVELDNIEIMD 138 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ +AEGE+ QL N D+++++Y VIK+KT VLF A +++ + + + Sbjct: 139 ILAYTTNKIAEGEVLQLINKNNFDISQDNYFKVIKAKTGVLFEACGKLACIANKCTLNQK 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +L G G +QL+DDVLDY G+V ++GKN+G+D ++GK TLP+I A ++ ++ Sbjct: 199 TSLSLIGKIFGEIYQLIDDVLDYSGDVAKIGKNLGDDLKDGKMTLPLIFAAEKANINDRE 258 Query: 252 FWKSTINDGKIS 263 K+ IN G +S Sbjct: 259 IIKNAINHGDLS 270 >gi|225851044|ref|YP_002731278.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1] gi|225645501|gb|ACO03687.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1] Length = 320 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/323 (34%), Positives = 188/323 (58%), Gaps = 8/323 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MK+L LK++E+ + K + S+VE I + Y++ SGGKRLRP+L L + +L + Sbjct: 1 MKILSREVLKEIEE---RLSKYMDSEVEFILKIGNYILDSGGKRLRPVLVLTFSKLL--K 55 Query: 61 GDNH---VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 G+N +A A+E++HTA+LLHDDVVD + RRGK AA V+GN T+VL GD++ + A Sbjct: 56 GENEERDYPIAVAMEYLHTASLLHDDVVDGAETRRGKAAANRVFGNDTTVLTGDYMYANA 115 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + + +S ++EG+L +L ++D+ EEDY +++ KTAVLF + Sbjct: 116 LYLFSVYGDIDMIRNVSDAVKKMSEGQLLELKKIGDIDMREEDYFRILEGKTAVLFGSCC 175 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 V + + G + +++ +YG+++GIAFQL+DD+LDY + ++GK + D R GK T P Sbjct: 176 YVGTALGGGSDKQKKSAYNYGLSIGIAFQLIDDLLDYIADEKKLGKPVCNDLREGKITYP 235 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 ++ + ++ EK F K I D +++++ +++E T +A Y A Sbjct: 236 LLSVLDKLSEDEKEFVKGVIRDLNPDKKHIERVKNMVKEKGGFDKTIEKAREYVDTAVRE 295 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L PDS + K L E+ + ++R Sbjct: 296 LENFPDSEYLKELEELAKYIVER 318 >gi|332978343|gb|EGK15068.1| octylprenyl diphosphate synthase [Psychrobacter sp. 1501(2011)] Length = 343 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 111/307 (36%), Positives = 180/307 (58%), Gaps = 7/307 (2%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACAIEFIHTA 77 + + S V+++ V +++I +GGKR+RP++TL + L + + ++ + LA E +HTA Sbjct: 39 VFGSLNSKVQLVMSVSQHVINAGGKRMRPLITLLCSRLCRDEQSEDAMHLAAITEMLHTA 98 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TL+HDDV+D+S LRRG A W N T+VLVGD+L+++AF +++ +S L+ S Sbjct: 99 TLVHDDVIDESGLRRGHPTANATWDNPTAVLVGDYLIARAFNLLVGFQSLPLLKLFSDGT 158 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR--QALK 195 C +AEGE+ QL N TE+DY+ +I KT+ LF A + +A +Q+ Q Sbjct: 159 CDIAEGEVLQLQHQHNPQATEDDYMRIIDGKTSRLFMMA---TCGVAILQDKPEFMQPFS 215 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ-RGTKREKNFWK 254 +G + G AFQ++DDVLDY G+ MGKN+G+D GKPTLP I+A + E N+ K Sbjct: 216 DFGQHFGNAFQIIDDVLDYTGDSEVMGKNLGDDLAEGKPTLPTIVALRLLKQSDEANYNK 275 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 I V++ + +++E+ AL RA + A+ +L LPD+ +++ L ++ Sbjct: 276 LRIAVQTGKVDDAQGLIKLVQESDALEYCRERALEETRLAQQALSQLPDNQYRQGLWQLT 335 Query: 315 DFCLQRL 321 + RL Sbjct: 336 ELASARL 342 >gi|148652697|ref|YP_001279790.1| polyprenyl synthetase [Psychrobacter sp. PRwf-1] gi|148571781|gb|ABQ93840.1| Polyprenyl synthetase [Psychrobacter sp. PRwf-1] Length = 309 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 109/309 (35%), Positives = 183/309 (59%), Gaps = 11/309 (3%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACAIEFIHTA 77 + + S V+++ +V +++I +GGKR+RP++TL + L + + + + LA E +HTA Sbjct: 5 VFGSLNSKVQLVMNVSQHVINAGGKRMRPLITLLCSRLCKDEQSKDAMHLAAITEMLHTA 64 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TL+HDDV+D+S +RRG+ A W N T+VLVGD+L+++AF +++ +S L+ S Sbjct: 65 TLVHDDVIDESGMRRGRPTANATWDNPTAVLVGDYLIARAFNLLVGFQSLPLLQLFSDGT 124 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR--QALK 195 C +AEGE+ QL N + TE DY+++I KT+ LF A ++ +A +Q+ Q Sbjct: 125 CDIAEGEVLQLQHQHNPEATETDYMNIIDGKTSRLFMMA---TAGVAILQDKPEFMQPFS 181 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA---FQRGTKREKNF 252 +G + G AFQ++DDVLDY G+ MGKN+G+D GKPTLP I+A ++ + + Sbjct: 182 DFGQHFGNAFQIIDDVLDYSGDSEVMGKNLGDDLAEGKPTLPTIVALRLLKQSNAADYDK 241 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 + + GK VE+ +++++ AL RA + A+ +L LPD+ ++K L + Sbjct: 242 LRIAVQTGK--VEDAASLIKLVQDSGALEYCRNRALEETRLAQQALAQLPDNEYRKGLWQ 299 Query: 313 VVDFCLQRL 321 + RL Sbjct: 300 LTQLASSRL 308 >gi|188996355|ref|YP_001930606.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931422|gb|ACD66052.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 317 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 107/304 (35%), Positives = 180/304 (59%), Gaps = 1/304 (0%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHT 76 ++ + + S+V I V KY+I SGGKR+RP L L + +++ + + +LA A+E++HT Sbjct: 12 VMYQHLDSNVNFILQVGKYIIDSGGKRVRPYLVLKFSKIMKNKNEEKDYILAAALEYLHT 71 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+LLHDDVVD S LRRGK A ++GN T+VL GD+L + A + + + ++ +S Sbjct: 72 ASLLHDDVVDGSQLRRGKPTANRIFGNDTTVLTGDYLYANALYLFSIHGNIDMIKNVSQT 131 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 +AEG+L +L + D+T ++Y +++ KTA LF + V + + +++Q Sbjct: 132 VKKMAEGQLLELKKIADFDITLQEYYSILEGKTAALFGSCCYVGTALGTDNETLKQKAFE 191 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 YG+N+G+AFQ+VDD+LDY G+ + GK+I D R GK T P+I ++ + +EK F KS Sbjct: 192 YGLNIGMAFQIVDDLLDYTGKEEKTGKSIMNDLREGKITYPLIAVREKLSAKEKEFIKSV 251 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 + + E+L K I+ + +T+ +A + KA +SLR +S + L + F Sbjct: 252 LLNKNPDTEDLLKVKNIVESYGGIEETKQKAKDFVDKAIESLRVFGNSEDVEELESLAKF 311 Query: 317 CLQR 320 ++R Sbjct: 312 IIER 315 >gi|304316531|ref|YP_003851676.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778033|gb|ADL68592.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 319 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 108/310 (34%), Positives = 183/310 (59%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+K++ +L I ++ I V+ L+ SGGKR+RP+L +A A + EY D + +A + Sbjct: 11 DMKKIDDFLLSNIKTNSPTIKKAVEDLVLSGGKRVRPLLVIAIARLGEYNEDKIIPIAAS 70 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H ATL+HDD++DDS +RRG+ + + +G +T+V GDFL SQAF ++ + S+E L Sbjct: 71 IEIMHMATLVHDDIIDDSKMRRGRESVQSKYGKETAVFTGDFLFSQAFNVIADIISKENL 130 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + ++ + EGE+ Q NLD++ YL I KTA+LF+ + E + AG+ + Sbjct: 131 KLIARGVKAICEGEIEQFDNRYNLDISVLRYLKRIYRKTALLFAISCESGATQAGLSKEL 190 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A++ +G+N+G+AFQ+ DD+LDY G +GK +G D NG TLP+I A T +K Sbjct: 191 TRAMRRFGLNVGMAFQIADDILDYEGVEKIVGKPLGSDVLNGIYTLPMIYALS--TSHKK 248 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + D K+S +++ + ++ + + + A Y +KA L +PD K + Sbjct: 249 AIEDILLKD-KLSKKDVNRVVKEVKLSGGIDFAKDLALKYVKKAIKFLDIMPDCEQKDLM 307 Query: 311 MEVVDFCLQR 320 +++ + L+R Sbjct: 308 IDIANDALKR 317 >gi|295698494|ref|YP_003603149.1| octaprenyl-diphosphate synthase [Candidatus Riesia pediculicola USDA] gi|291157286|gb|ADD79731.1| octaprenyl-diphosphate synthase [Candidatus Riesia pediculicola USDA] Length = 318 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 110/313 (35%), Positives = 186/313 (59%), Gaps = 3/313 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + L K++ VN +I ++ SDV+++ +KY + GK++RP++TL + +L YR Sbjct: 3 LKFIFKLIKKEISSVNKIIFDQLRSDVQLVNRFIKYFNQNSGKKIRPIITLLFSKILGYR 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G ++ A IEFIH ATLLHDD++D S +RRG+ + +V+GN+ SVLVGDF+ +++ M Sbjct: 63 GKKDIIAASLIEFIHIATLLHDDIIDSSIIRRGRKKSSIVFGNEISVLVGDFVYAKSLKM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S++ L +S + EGE+ QLS ++ L++++E Y+ +I KT+ LF A + Sbjct: 123 IVGLNSKKVLNLISKTVHMIIEGEILQLS-NRTLEISQETYMKIIYQKTSSLFETAAYIL 181 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + I V + + ALK+YG + G AFQL++D+ DY+ N G D +G TLP+I Sbjct: 182 TFICNVDSDKKIALKNYGRHFGNAFQLINDIKDYQNCSNNFISK-GNDLNDGNFTLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q+ +K+E K I +GK L++ +M+ +L + A S + A SL Sbjct: 241 VMQKVSKKESMEIKKVIQEGK-GRSILRRISFLMKRYGSLEYSRKIAESEIKIAIQSLDH 299 Query: 301 LPDSSWKKSLMEV 313 SS+K +L+++ Sbjct: 300 FKCSSYKTALIKL 312 >gi|237756556|ref|ZP_04585080.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691284|gb|EEP60368.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium yellowstonense SS-5] Length = 317 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 105/304 (34%), Positives = 179/304 (58%), Gaps = 1/304 (0%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHT 76 ++ + + S+V I V KY+I SGGKR+RP L L + +++ + + +LA A+E++HT Sbjct: 12 VMYQHLDSNVNFILQVGKYIIDSGGKRVRPYLVLKFSKIMKNKNEEKDYILAAALEYLHT 71 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+LLHDDVVD S LRRGK A ++GN T+VL GD++ + A + + ++ +S Sbjct: 72 ASLLHDDVVDGSQLRRGKPTANRIFGNDTTVLTGDYMYANALYLFSTHGDIDMIKNVSQT 131 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 +AEG+L +L + D+T ++Y +++ KTA LF + V + + +++Q Sbjct: 132 VKKMAEGQLLELKKIADFDITLQEYYSILEGKTAALFGSCCYVGTALGTDNETLKQKAFE 191 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 YG+N+G+AFQ+VDD+LDY G+ + GK+I D R GK T P+I ++ + +EK F KS Sbjct: 192 YGLNIGMAFQIVDDLLDYTGKEEKTGKSIMNDLREGKITYPLIAVREKLSAKEKEFIKSV 251 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 + + E+L K I+ + +T+ +A + KA ++LR +S + L + F Sbjct: 252 LLNKNPDTEDLIKVKNIVESYGGIEETKQKAKDFVDKAIENLRVFGNSEDVEELESLAKF 311 Query: 317 CLQR 320 ++R Sbjct: 312 IIER 315 >gi|319789063|ref|YP_004150696.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] gi|317113565|gb|ADU96055.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] Length = 324 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 108/298 (36%), Positives = 170/298 (57%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + S V ++ Y++ SGGKR+RP LT+ ++E D + +A +E++HTATLLHD Sbjct: 25 LSSKVSLVLRAGGYILDSGGKRVRPGLTVIAGKLVEAPLDRLIPVATVMEYMHTATLLHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 D+VD + LRRG+ + V+GN +VLVGD++ ++A ++ E L+ + +AE Sbjct: 85 DIVDGAKLRRGRPSVNAVFGNDVAVLVGDYMFAKAIYVLAVYGGPEVLKTAAKTVQDMAE 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GEL QL ++++TEE+Y +I KTA L S E +++ G R+ALK YG +G Sbjct: 145 GELLQLEKIGDINLTEEEYFDIIYRKTASLLSTCCECGAIVGGASEKERKALKDYGTYIG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 AFQLVDD DY + +GK G D R GK T P++ A +R T+ E+ + +N+ Sbjct: 205 YAFQLVDDAFDYISDEKTIGKPAGNDIREGKVTYPLLWALKRATEEEREAVERVLNNPSP 264 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + E ++ + E T A + ++AK+SL +S KK+L EV DF ++R Sbjct: 265 TKEEIELVRNFVLEKGGEKATFELARDFVKRAKESLEIFKESPLKKALFEVADFIVER 322 >gi|158523240|ref|YP_001531110.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3] gi|158512066|gb|ABW69033.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3] Length = 327 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 181/313 (57%), Gaps = 6/313 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DME + + + + + ++ +++F+GGKR+RP+L + A + Y G + ++ Sbjct: 16 DMEAIETALADNLTPYFDKVREIAGHILFTGGKRVRPLLMVLCARLCRYDGSDDKRVSVM 75 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 E++HTATLLHDD+VD +A+RRG AA +VW ++VLVGDFLL+++ + ++T + Sbjct: 76 FEYLHTATLLHDDIVDGAAMRRGSPAAHVVWDPASAVLVGDFLLARSASIAVDTGRIALM 135 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ + +++GE+ QL+ N++++E +Y +I KTAVL A +++AG ++ Sbjct: 136 KILADILEDMSQGEIHQLARKGNVNLSEAEYRTIILHKTAVLMEGACRSGAILAGASDAH 195 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL YG NLG+AFQ++DD+LDY + +GK +G D R GK TLP+I A R + Sbjct: 196 ARALADYGRNLGMAFQMIDDLLDYTADTQVLGKAVGADLREGKFTLPLIHALGRADAGDA 255 Query: 251 NFWKSTINDGKIS---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 K + + ++ E LK+ ++ + T A ++ Q+A+ +L S + Sbjct: 256 ETIKRIMGNPDVTDAAFETLKR---LLETYDGIGYTRRCAEAHIQEARSALDMFEPSETR 312 Query: 308 KSLMEVVDFCLQR 320 L ++ D+ + R Sbjct: 313 TLLEKLADYTILR 325 >gi|326560787|gb|EGE11154.1| solanesyl diphosphate synthase [Moraxella catarrhalis 103P14B1] gi|326574419|gb|EGE24361.1| solanesyl diphosphate synthase [Moraxella catarrhalis 101P30B1] Length = 331 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 112/321 (34%), Positives = 183/321 (57%), Gaps = 11/321 (3%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 ED + D + + + S V+++ V K++I +GGKR+RP++TL TA ML Sbjct: 17 EDFAIMDKQ-----VFGSLNSKVQLVMSVSKHVIDAGGKRMRPLITLLTARMLHDEQSQQ 71 Query: 65 VL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + LA E +HTATL+HDDV+D S LRRGK A W N T+VLVGD+L++++F +++ Sbjct: 72 AMQLAAITEMLHTATLVHDDVIDASGLRRGKPTANATWDNPTAVLVGDYLIARSFNLLVG 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 L+ S C +AEGE+ QL N E DYL +I KT+ LF A + ++L+ Sbjct: 132 FNHLPLLKLFSDGTCDIAEGEVLQLQHQHNPKTLESDYLQIIDGKTSRLFMMATKGAALL 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LA 241 G + + L ++ + G AFQ++DDVLD+ G+ MGKN+G+D GKPTLP+I L Sbjct: 192 QGREEFLDD-LGAFAYHFGNAFQMIDDVLDFSGDAAIMGKNLGDDLAEGKPTLPIIKTLE 250 Query: 242 F-QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 F + + + + GK+ V++++ +++ + AL + RA + A+ +L Sbjct: 251 FLEHSNPAMYDKLRIAVQTGKV-VDDVQMLIKLVQSSGALDYCKARALEETKNAQHALNN 309 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP++ +++ L + + RL Sbjct: 310 LPNNRYREGLYLLTELASSRL 330 >gi|299137617|ref|ZP_07030798.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8] gi|298600258|gb|EFI56415.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8] Length = 334 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 107/320 (33%), Positives = 177/320 (55%), Gaps = 6/320 (1%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL D+ + + S VE++ D+ +YLI GGKR+RPM+ L +A + + + Sbjct: 14 DLLRDDLAAIESEFAHQSDSPVEVVTDIAQYLIAGGGKRIRPMMLLLSARAVGCESEARI 73 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 L +E +HTATL+HDD++D+++ RRG+ ++ WGN VL GD+L Q+F + + Sbjct: 74 RLGAVVEMLHTATLVHDDIIDEASTRRGRPSSNTTWGNAKCVLAGDWLYMQSFQTALAER 133 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + L+ L + + EGEL Q+ +L + EE+Y +I KTA LF ++++ ++IA Sbjct: 134 NFRILDLLISLTQQMVEGELLQMEKLGHL-INEEEYFDLIYRKTACLFKVSMQLGAVIAV 192 Query: 186 VQNS-----VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + +AL YG NLG+AFQ+VDDVLD + + +GK D R GK TL VI Sbjct: 193 PPTTPNAAPFEEALGEYGRNLGLAFQIVDDVLDLTAQDDVLGKPTASDLREGKATLAVIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A +RGT ++ ++ + D + I++ + +L A +Y + A+ S+ Sbjct: 253 ALERGTGADREAIRTVLADRSFARVAHADILEILQRHESLAYAMDTACAYAEAARQSIAD 312 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ V F R Sbjct: 313 LPESDYKRALLWVPGFVTTR 332 >gi|296113380|ref|YP_003627318.1| solanesyl diphosphate synthase [Moraxella catarrhalis RH4] gi|295921074|gb|ADG61425.1| solanesyl diphosphate synthase [Moraxella catarrhalis RH4] gi|326559225|gb|EGE09656.1| solanesyl diphosphate synthase [Moraxella catarrhalis 46P47B1] gi|326559864|gb|EGE10264.1| solanesyl diphosphate synthase [Moraxella catarrhalis 7169] gi|326569650|gb|EGE19702.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC1] gi|326570131|gb|EGE20176.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC8] gi|326570869|gb|EGE20893.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC7] gi|326575988|gb|EGE25911.1| solanesyl diphosphate synthase [Moraxella catarrhalis CO72] gi|326576400|gb|EGE26309.1| solanesyl diphosphate synthase [Moraxella catarrhalis O35E] Length = 348 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 112/321 (34%), Positives = 183/321 (57%), Gaps = 11/321 (3%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 ED + D + + + S V+++ V K++I +GGKR+RP++TL TA ML Sbjct: 34 EDFAIMDKQ-----VFGSLNSKVQLVMSVSKHVIDAGGKRMRPLITLLTARMLHDEQSQQ 88 Query: 65 VL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + LA E +HTATL+HDDV+D S LRRGK A W N T+VLVGD+L++++F +++ Sbjct: 89 AMQLAAITEMLHTATLVHDDVIDASGLRRGKPTANATWDNPTAVLVGDYLIARSFNLLVG 148 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 L+ S C +AEGE+ QL N E DYL +I KT+ LF A + ++L+ Sbjct: 149 FNHLPLLKLFSDGTCDIAEGEVLQLQHQHNPKTLESDYLQIIDGKTSRLFMMATKGAALL 208 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LA 241 G + + L ++ + G AFQ++DDVLD+ G+ MGKN+G+D GKPTLP+I L Sbjct: 209 QGREEFLDD-LGAFAYHFGNAFQMIDDVLDFSGDAAIMGKNLGDDLAEGKPTLPIIKTLE 267 Query: 242 F-QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 F + + + + GK+ V++++ +++ + AL + RA + A+ +L Sbjct: 268 FLEHSNPAMYDKLRIAVQTGKV-VDDVQMLIKLVQSSGALDYCKARALEETKNAQHALNN 326 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP++ +++ L + + RL Sbjct: 327 LPNNRYREGLYLLTELASSRL 347 >gi|32491227|ref|NP_871481.1| hypothetical protein WGLp478 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166434|dbj|BAC24624.1| ispB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 323 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 108/307 (35%), Positives = 177/307 (57%), Gaps = 3/307 (0%) Query: 15 VNFLI-LKR-ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 +NF I L+R + S+V++I KY++ + GK +RP+ + A L Y H++LA IE Sbjct: 15 INFQIELERSLYSNVDLIKKCNKYILNNNGKFIRPIAIILAAKSLFYNKKKHIILASLIE 74 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 IH +TLLHDD++DD+ RRG + +V+GN ++L+GDF+ ++AF M+ + +S + + Sbjct: 75 LIHMSTLLHDDIIDDAKKRRGNASVNVVFGNIPTILIGDFIYTRAFQMISKLRSFKIFKI 134 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +S + EGE+ QL+ ++D+T ++Y+ +I KTA LF +L+ +++++ Q Sbjct: 135 ISNAVNMIVEGEILQLTYCNSVDITIKNYMQIIYKKTAKLFEVSLQSAAILSKSSYKEEQ 194 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 A K+YG LGI+FQ++DD LDY+ + + GK +G D + GK TLP+I A + + Sbjct: 195 AFKNYGRYLGISFQIIDDFLDYKSDFKKFGKILGNDLKEGKVTLPLIHAMKNSNNSQFLL 254 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 K I G S L IM E+R+L T A +KA L L S + ++L Sbjct: 255 IKEAIQKGNHS-HLLNDILKIMEEHRSLEYTREYAKKKIEKAISFLNELKYSIYIEALEN 313 Query: 313 VVDFCLQ 319 + F L Sbjct: 314 LAKFYLN 320 >gi|110597409|ref|ZP_01385696.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM 13031] gi|110340953|gb|EAT59424.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM 13031] Length = 324 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 169/294 (57%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V +Y++ GK++RP L L +A + ++ A +E +H+ATL+HDDVVD + Sbjct: 31 LVDKVTRYVLKQQGKQIRPALVLLSAQLCGGVNESSYRAAIMVELLHSATLIHDDVVDGA 90 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 +RRG + +W N+ SVL+GD+LLS+ +E K L +S ++EGE+ Q+ Sbjct: 91 EMRRGLASINALWKNKISVLIGDYLLSRGLLYSLEHKDYGFLHMVSEAVRRMSEGEILQI 150 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 +++LD++EEDYL VI KTA L S+A + ++ + S +LKSYG LG+AFQ+ Sbjct: 151 QKTRSLDISEEDYLSVISDKTASLISSACAMGAMSSTTDESAIASLKSYGEYLGLAFQIR 210 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LDY G+ + GK +G D ++ K TLP+I A ++ E+ +S + Sbjct: 211 DDLLDYTGDSKKTGKEMGIDIKDKKITLPLIYALSHASESEQKSIRSILKSAGKRASRSG 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 + ++ LV + A KA S+ P+S+ K+SL+++VDF ++R N Sbjct: 271 EVVAFVKNKGGLVYSAEVAEGLAAKAVSSIAHFPESTAKRSLLQLVDFVMKRDN 324 >gi|213420464|ref|ZP_03353530.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 244 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 101/243 (41%), Positives = 144/243 (59%), Gaps = 1/243 (0%) Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+ S + LE +S Sbjct: 1 TLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAV 60 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S ++AG + L+ Y Sbjct: 61 NVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDY 120 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ A + GT + ++ I Sbjct: 121 GRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLHAMRHGTPEQSAMIRTAI 180 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 G L+ M +L T RA KA +L+ LPD+ W+++L+ + Sbjct: 181 EQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQILPDTPWREALIGLAHIA 239 Query: 318 LQR 320 +QR Sbjct: 240 VQR 242 >gi|296132634|ref|YP_003639881.1| Trans-hexaprenyltranstransferase [Thermincola sp. JR] gi|296031212|gb|ADG81980.1| Trans-hexaprenyltranstransferase [Thermincola potens JR] Length = 323 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 117/313 (37%), Positives = 169/313 (53%), Gaps = 32/313 (10%) Query: 20 LKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 LK+I + E ++ + +L+ +GGKRLRP L +Y + + LA A+E IH A Sbjct: 21 LKKIANLPEEKLLSETSGHLLNAGGKRLRPAFALLAGKTFQYDLEKLLPLAVALELIHMA 80 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TL+HDDVVD S RRG + WGNQ SV GDF+ Q+ + + + E L+ V+ Sbjct: 81 TLVHDDVVDASVTRRGIPTVKAKWGNQVSVYTGDFIFGQSLIQIARCNNTKIAEILADVS 140 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 ++EGE+ QL + + + DYL IK KTA+L SA+ E+ +L AG + +AL+ Y Sbjct: 141 VKMSEGEIVQLRTTFDPKQSLRDYLFRIKRKTALLISASCELGALAAGAPENFIRALRWY 200 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW---- 253 G LG+AFQ+ DD+LD E E+GK +G D R G TLPVI A Q+ ++E W Sbjct: 201 GYYLGMAFQITDDILDLIAEEKELGKPVGSDLRQGVVTLPVIFALQKSPRKE---WLAEV 257 Query: 254 --KSTINDGKI--SVENLKKAFIIMRENRALVDTEYRAYSYGQ------KAKDSLRCLPD 303 K +G++ +++ +KK I YS+G KAK L LP+ Sbjct: 258 VGKPDKKEGEVLEAIDEIKKCGAI-------------EYSFGVSQRYLIKAKQRLEILPE 304 Query: 304 SSWKKSLMEVVDF 316 S KKSL + DF Sbjct: 305 SHAKKSLALIADF 317 >gi|20094211|ref|NP_614058.1| geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19] gi|19887236|gb|AAM01988.1| Geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19] Length = 324 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 166/289 (57%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D +LI +GGKR+RP+L + + LML ++ + A A+E IHT TL+HDD++D+ R Sbjct: 34 DACWHLIEAGGKRIRPLLAIKSCLMLGGSEEDVLPEAVAVELIHTFTLIHDDIMDEDDER 93 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG A + WG ++L GD L S+AF + E EA++ L+ + EG+ + Sbjct: 94 RGVPAVHVKWGVPVAILAGDTLFSKAFEVAAEGGDVEAVKELARACTEICEGQAMDIGFE 153 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 +VTE+++L +I+ KTA L + V L AG +AL+ YG NLGIAFQ+ DDV Sbjct: 154 NRTEVTEDEFLEMIRKKTAALIRTSCVVGGLKAGANREQLEALREYGENLGIAFQIQDDV 213 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD G+ +E+GK +G D GK TL VI + + ++ S + + S E++++ Sbjct: 214 LDLVGDESELGKPVGSDIVEGKKTLIVIKGLELADEEQRERILSVLGNEDASREDVREVI 273 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I+ + A+ + RA Y +AK +LR LP++ ++ L ++ DF ++R Sbjct: 274 QILEDLGAIDYAKKRAREYADRAKAALRELPENEHREFLEKLADFVVER 322 >gi|326563527|gb|EGE13786.1| solanesyl diphosphate synthase [Moraxella catarrhalis 12P80B1] Length = 348 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 111/321 (34%), Positives = 182/321 (56%), Gaps = 11/321 (3%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 ED + D + + + S V+++ V K++I +GGKR+RP++TL TA ML Sbjct: 34 EDFAIMDKQ-----VFGSLNSKVQLVMSVSKHVIDAGGKRMRPLITLLTARMLHDEQSQQ 88 Query: 65 VL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + LA E +HTATL+HDDV+D S LRRGK A W N T+VLVGD+L++++F +++ Sbjct: 89 AMQLAAITEMLHTATLVHDDVIDASGLRRGKPTANATWDNPTAVLVGDYLIARSFNLLVG 148 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 L+ S C +AEGE+ QL N E DYL +I KT+ LF A + ++L+ Sbjct: 149 FNHLPLLKLFSDGTCDIAEGEVLQLQHQHNPKTLESDYLQIIDGKTSRLFMMATKGAALL 208 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LA 241 G + + L ++ + G AFQ++DDVLD+ G+ MGKN+G+D GKPTLP+I L Sbjct: 209 QGREEFLDD-LGAFAYHFGNAFQMIDDVLDFSGDAAIMGKNLGDDLAEGKPTLPIIKTLE 267 Query: 242 F-QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 F + + + + GK+ V++++ +++ + AL + R + A+ +L Sbjct: 268 FLEHSNPAMYDKLRIAVQTGKV-VDDVQMLIKLVQSSGALDYCKARVLEETKNAQHALNN 326 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP++ +++ L + + RL Sbjct: 327 LPNNRYREGLYLLTELASSRL 347 >gi|119356815|ref|YP_911459.1| trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM 266] gi|119354164|gb|ABL65035.1| Trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM 266] Length = 324 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 101/292 (34%), Positives = 172/292 (58%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V +Y++ GK++RP L L +A M D+ A +E +H+ATL+HDDVVD + Sbjct: 31 LVDKVTRYVLKQQGKQIRPALVLLSAKMCGGVNDSTYRSAIMVELLHSATLIHDDVVDGA 90 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 +RRG + +W N+ SVL+GD+LLS+ +E K +L +S ++EGE+ Q+ Sbjct: 91 EMRRGLASINALWKNKISVLIGDYLLSKGLLYSLENKDYFSLHIVSEAVRRMSEGEILQI 150 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 +++LD++EEDYL VI KTA L +++ + + A + +K+YG LG+AFQ+ Sbjct: 151 QKTRSLDISEEDYLSVISDKTASLIASSCAMGAASATEDEAAIAKMKNYGEYLGLAFQIR 210 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LDY G+ N+ GK +G D ++ K TLP+I A + RE+N +S + K Sbjct: 211 DDLLDYTGDSNKTGKQMGIDVKDKKITLPLIHALREVPVREQNVIRSILKSSKKRALKSG 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + ++ + L A + +A+ S++ P+S+ K+SL+++VDF ++R Sbjct: 271 EVIEFVKRSGGLEYAAGVAEGFALQARQSIKDFPESAAKQSLLDLVDFVMKR 322 >gi|257453962|ref|ZP_05619238.1| solanesyl diphosphate synthase [Enhydrobacter aerosaccus SK60] gi|257448627|gb|EEV23594.1| solanesyl diphosphate synthase [Enhydrobacter aerosaccus SK60] Length = 347 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 107/323 (33%), Positives = 183/323 (56%), Gaps = 8/323 (2%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + ++ + D E ++ + + S V+++ V +++I +GGKR+RP+++L + + + Sbjct: 29 QQIQSIIADDFEIMDKQVYGSLSSKVKLVMSVSQHVINAGGKRMRPLISLLCSRICNDQP 88 Query: 62 DNHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + AI E +HTATL+HDDV+D S +RRGK A W N T+VLVGD+L++++F + Sbjct: 89 SQAAMHLGAITEMLHTATLVHDDVIDASGMRRGKPTANATWDNATAVLVGDYLIARSFNL 148 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S L+ S C +AEGE+ QL + TE DY+ +I KT+ LF A S Sbjct: 149 LVGFGSLPLLQLFSDGTCDIAEGEVLQLQHQHDPKATEADYMKIIDGKTSRLFMMA---S 205 Query: 181 SLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 +A ++N A +G + G AFQ++DDVLD+ G+ +GKN+G+D GKPTLP+ Sbjct: 206 QGVAILENRPEYNDAFAKFGQHFGNAFQIIDDVLDFVGDSEVLGKNVGDDIAEGKPTLPL 265 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 I A + T + I G+ V + + I++ + AL +A + A+ ++ Sbjct: 266 IKALEMTTGDTHEKLRIAIQTGQ--VNDTHEIIEIVKTSGALAYCRDKAMQESEIARQAV 323 Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321 LPDS +++ L++++ QRL Sbjct: 324 LTLPDSRYRQGLLDLITLASQRL 346 >gi|68304932|gb|AAY89943.1| predicted octaprenyl-diphosphate synthase [uncultured bacterium BAC13K9BAC] Length = 319 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 118/315 (37%), Positives = 186/315 (59%), Gaps = 14/315 (4%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+EK+N + K +DV +I ++ ++I SGGKR+RP++ + + + ++ + +V+ A A Sbjct: 14 DLEKLNIFLKKATSTDVSLINNLSSHMIESGGKRIRPIILMLFSRL--FKNEKNVIEAGA 71 Query: 71 I-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 I E IH ATLLHDDVVD S +R A +WG+ ++VLVGDFL S+AF ++++ ++ Sbjct: 72 ILELIHAATLLHDDVVDQSDIRHNIKTANKLWGDDSAVLVGDFLYSRAFELIVDINKEKV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + L+ +++GE+ QL + + + YL++I KT LF A+ V+S +AG N Sbjct: 132 YKILAETTNQISQGEVIQLMVKDKIIDNTDKYLNIIYLKTGKLFEASAAVASELAG-GNY 190 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + A KS+G N GIA+QL +D LDY G+ +E GKNI ED GK TLP+I ++ + Sbjct: 191 IDNA-KSFGKNFGIAYQLRNDYLDYFGDESETGKNIIEDLSEGKSTLPLIHSYLNSNSDD 249 Query: 250 KNFWKSTINDGKISVENLKKAFI---IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 K I +GKI L K+ + I + N + V T + Y A +SL L S Sbjct: 250 KKILLE-IFEGKI----LSKSNVLLEIFKRNNSDVYTRNKIKEYSDSAIESLDGLSGES- 303 Query: 307 KKSLMEVVDFCLQRL 321 K+SL+++ FC QR+ Sbjct: 304 KQSLVDLTHFCSQRI 318 >gi|332799448|ref|YP_004460947.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1] gi|332697183|gb|AEE91640.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1] Length = 326 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 102/274 (37%), Positives = 166/274 (60%), Gaps = 2/274 (0%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 +I SGGKRLRP + LA A EY + LA ++E IHTAT++HDD+VDDS +RRG ++ Sbjct: 43 MISSGGKRLRPAMLLAAARFGEYDFEIVRPLALSVELIHTATIIHDDIVDDSPIRRGVLS 102 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 + G +V GD++ + F ++ + LE +S + EGEL+Q + D+ Sbjct: 103 IQSQLGKDVAVYAGDYIFCKVFEILAASTYSNILEQVSKAMSQICEGELKQREDLFDTDL 162 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T +DYL+ I+ KTA+LF+ + ++ + ++ + + +AL SYG+N+G+AFQ++DD+LD+ G Sbjct: 163 TFKDYLYRIQKKTAILFALSAQMGADVSKAPDKIIKALYSYGINIGMAFQIIDDLLDFTG 222 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + ++GK G D R G TLPVI A + RE+ + + + + + + A I+++ Sbjct: 223 DYKKLGKPTGSDIREGIITLPVIYALKHSDDRER--LQEILKNKNTNEDEMSIAVEIIQK 280 Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + L TE+ A Y QKAK S+ LP++ KK L Sbjct: 281 SGGLKYTEHMAERYVQKAKRSIVILPNTPMKKLL 314 >gi|225874396|ref|YP_002755855.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC 51196] gi|225794389|gb|ACO34479.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC 51196] Length = 329 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/296 (33%), Positives = 165/296 (55%), Gaps = 1/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S V++I ++ +YL GGKR+RP+L L +A YRG L +E +HTATL+HDD+ Sbjct: 33 SRVQVITEIAEYLREGGGKRIRPLLLLLSARSQSYRGAGATRLGAVVEMVHTATLVHDDI 92 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D + +RRG+ + WGN VL GD+L QAF + ++ ++ L+ L + + EGE Sbjct: 93 IDAADMRRGRPSPNTTWGNAKCVLAGDWLYMQAFRVALDERNFRVLDLLIGLTQQMVEGE 152 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L QL + V ++Y +I KTA LF ++ + +++A ++ + + YG NLG+A Sbjct: 153 LMQLE-TLGRQVNSQEYYDLIYRKTACLFEVSMRLGAVLAKATDAEEECMGEYGRNLGLA 211 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+VDDVLD +GK + D R GK T+ VI A + G E+ + + D Sbjct: 212 FQIVDDVLDLTATEEVLGKPVASDLREGKATMAVIHALENGGAEERAAILTVLEDQNFER 271 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + ++ N ++ A+ Y + A+ +L LP+S +K++L+ V D+ + R Sbjct: 272 VSHDQILAALKRNGSVEYAMNTAFEYAEAARQALSFLPESDYKRALLWVPDYVVAR 327 >gi|94969054|ref|YP_591102.1| trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis Ellin345] gi|94551104|gb|ABF41028.1| Trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis Ellin345] Length = 331 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 172/297 (57%), Gaps = 3/297 (1%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+V I ++ +YL GGKRLRP L L +A ++ YRG V L +E IHTATL+HDD+ Sbjct: 35 SNVAAITEIGEYLRNGGGKRLRPALLLLSAKLMAYRGLGAVRLGAVVEIIHTATLVHDDI 94 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +DD+ +RRG+ +A WGN VL GD+L QAF + + ++ L+ L + + EGE Sbjct: 95 IDDAEIRRGRPSANTQWGNSKCVLAGDWLYMQAFKVAVAERNFAVLDTLIELTQKMVEGE 154 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ L ++ +++ +I KTA LFS + + ++ G + L YG +G+A Sbjct: 155 LLQIEKLGKL-ISLQEHFDLIDRKTACLFSVCMRLGGILGGATAEQIEKLGEYGHCVGMA 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND-GKIS 263 FQ+VDDVLD +GK +G D R GK T+ VI A + T E++ + + + G +S Sbjct: 214 FQIVDDVLDLTASEEVLGKPVGSDLREGKVTMAVIDALEHCTPAERDTIVAVMRENGFVS 273 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 V++ I+ R + ++ + RA + KAK ++ PDS +K++L+ V +F ++R Sbjct: 274 VQHADILKILKRYD-SVENALLRANEFAVKAKAAIEEFPDSEYKRALIWVPEFVVER 329 >gi|322436201|ref|YP_004218413.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9] gi|321163928|gb|ADW69633.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9] Length = 329 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 103/297 (34%), Positives = 169/297 (56%), Gaps = 1/297 (0%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 S V++I D+ +YLI GGKR+RP+L L +A L + + L +E +HTATL+HDD Sbjct: 32 ASPVQVITDIAEYLIAGGGKRIRPLLLLLSAKALGATSQSRIRLGAVVEMLHTATLVHDD 91 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 ++D++ RRG+ ++ WGN VL GD+L Q+F +E ++ L+ L + + EG Sbjct: 92 IIDEADTRRGRPSSNTAWGNSKCVLAGDWLYMQSFRTALEERNFHVLDLLITLTQQMVEG 151 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 EL Q+ +L + EE+Y +I KTA LF ++++ + I G + + L YG NLG+ Sbjct: 152 ELLQMEKLGHL-INEEEYFDLIFRKTAFLFKVSMQLGAAIEGASDQTEEKLGEYGRNLGL 210 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQ+VDDVLD + +GK + D R GK TL VI A +RGT ++ ++ + D + Sbjct: 211 AFQIVDDVLDLTAAEDVLGKPVASDLREGKATLAVIHALERGTGADREAIRTVLADRSFA 270 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + I++ + ++ A +Y + A+ S+ LP + K++L+ V F R Sbjct: 271 HVSHVQILEILQRHGSIDYAMDTACAYAEAARLSIADLPATDAKRALLWVPGFVTSR 327 >gi|317050825|ref|YP_004111941.1| polyprenyl synthetase [Desulfurispirillum indicum S5] gi|316945909|gb|ADU65385.1| Polyprenyl synthetase [Desulfurispirillum indicum S5] Length = 326 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 113/311 (36%), Positives = 178/311 (57%), Gaps = 16/311 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 I + S V + +V +Y+ SGGKR+RP+L L T+ + + + IE+IHTAT Sbjct: 21 IQSNLTSRVRRVQEVGEYIFQSGGKRIRPLLVLLTSKLCGGDERRAIKIGGIIEYIHTAT 80 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 LLHDDV+D++ +RRG+ +A +GN+ +LVGD+L S+AF +++ + LS V Sbjct: 81 LLHDDVIDEACVRRGRDSANFKFGNEMVILVGDYLYSKAFQVLVADGDPRVQKTLSDVTT 140 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA-GVQNSVRQALKSY 197 ++EGE+ QL S + VT EDY +I+ KTA+L +A + A + + AL + Sbjct: 141 LMSEGEVFQLVKSFDFSVTLEDYFQIIEHKTAILIAACAKCGGYTAPDLSEEMADALWDF 200 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQL+DD+LDY G+ + +GK IG D + GK T+PVI ++ EK+ + I Sbjct: 201 GYNIGMAFQLIDDILDYMGDASTLGKTIGTDLKEGKMTIPVIKLRDLASEEEKDRLEKLI 260 Query: 258 NDGKI-SVENLKKAFIIMRENRALVDT-EYR------AYSYGQKAKDSLRCLPDSSWKKS 309 I + E+L +F+I L+DT + R AYS+ KA+ + LP ++ Sbjct: 261 EQQMIPTAEDL--SFVI-----GLMDTYDIRRHSMDVAYSFLDKARKAAEVLPAGIYRDC 313 Query: 310 LMEVVDFCLQR 320 L V D+ + R Sbjct: 314 LHVVADYVINR 324 >gi|91200422|emb|CAJ73469.1| similar to octaprenyl diphosphate synthase [Candidatus Kuenenia stuttgartiensis] Length = 323 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 104/310 (33%), Positives = 178/310 (57%), Gaps = 3/310 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M++V K + + D+V ++ GKRLRP LTL + + H+ LA + Sbjct: 14 MDEVEARFYKELQPQNNSLADLVVHISKYKGKRLRPALTLLSGKCISDTAPQHIDLAVVV 73 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +HTATL+HDD++D++A+RR + WG + S+L GD+L S+ F ++ SQ A Sbjct: 74 EMVHTATLVHDDIIDEAAMRRHVESMNSKWGREISILFGDYLFSRGFTILSALDSQIATL 133 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS T+ EGEL QL ++ ++EEDY+ +I+ KTA L + + + + AG + + Sbjct: 134 LLSQTVNTMCEGELIQLKRRYDVGLSEEDYIDIIEKKTASLCATSCRLGATFAGANHKLS 193 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + + +YG+ +G AFQ++DD LD+ G+ +E+GK++ D + GK TLP+I + ++ Sbjct: 194 EMMSNYGLKIGTAFQIIDDCLDFMGDEDEVGKSLNTDIKKGKLTLPLIRLVHQLPVSKRE 253 Query: 252 FWKSTINDGKISVENLKKAFI-IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 K I G + + K A + ++ E+ A+ RA S ++A+D + LPDS +K +L Sbjct: 254 STKELIFKGHL--DEKKDAIVELLTEHDAVEYAFDRARSIVKQAQDVIAPLPDSQYKTAL 311 Query: 311 MEVVDFCLQR 320 +E+ D+ + R Sbjct: 312 IELADYIIAR 321 >gi|313204660|ref|YP_004043317.1| polyprenyl synthetase [Paludibacter propionicigenes WB4] gi|312443976|gb|ADQ80332.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4] Length = 328 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 105/296 (35%), Positives = 163/296 (55%), Gaps = 1/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 +D M+ V +Y++ GK+LRPML L +A + + N V A A+E +HTA+L+HDDV Sbjct: 32 TDNPMLETVHEYVLQKSGKQLRPMLVLLSAKLCGHVNQNTVDGALALELLHTASLIHDDV 91 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VDD+ RRGK + W N+ ++L GD++LS+A +T S L++++ + L++GE Sbjct: 92 VDDTLERRGKPSINARWTNKIAILSGDYILSKALVCATKTNSLPVLKSIANIGMQLSDGE 151 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L QLS + L+ +EE+YL +I+ KTA+LFS EV L L+++G LGI Sbjct: 152 LLQLSNVQVLNASEENYLTIIRKKTALLFSTCTEVGGLSVNAAEDTLVRLRNFGEYLGIC 211 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD+ DY ++ +GK D R+GK TLP+I A + EKN I + + Sbjct: 212 FQIKDDIFDYSENIS-IGKPTANDVRDGKITLPLIFALKNSEGDEKNKVVKIIEEKDFTP 270 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 EN++ +N + + +Y KA D L S K SL+ ++ R Sbjct: 271 ENIQTIIHFTHDNGGVAYAAKQMEAYKNKAIDELNGFAGSDVKTSLIRCAEYAANR 326 >gi|217420539|ref|ZP_03452044.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 576] gi|217395951|gb|EEC35968.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 576] Length = 242 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 101/220 (45%), Positives = 137/220 (62%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L + +LA Sbjct: 23 DMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQKHVLAAV 82 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ + Sbjct: 83 VEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRVM 142 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 143 EILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPT 202 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 A YG +G AFQ++DD LDY G MGKN G+D R Sbjct: 203 EAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLR 242 >gi|307945555|ref|ZP_07660891.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4] gi|307771428|gb|EFO30653.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4] Length = 172 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 90/149 (60%), Positives = 115/149 (77%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L DL ME+VN LIL + S+V++IP++ ++LI SGGKRLRPMLTLA A M YRGD Sbjct: 20 LLDLVSGGMEEVNQLILSKAGSNVDLIPEIARHLISSGGKRLRPMLTLACADMFGYRGDG 79 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV+LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M+++ Sbjct: 80 HVVLAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKMMVD 139 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSK 152 S EAL LS + +AEGE+ QL +K Sbjct: 140 VGSLEALRILSEASAIIAEGEVMQLGAAK 168 >gi|121534144|ref|ZP_01665969.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1] gi|121307247|gb|EAX48164.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1] Length = 322 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 110/298 (36%), Positives = 169/298 (56%), Gaps = 10/298 (3%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I S V+ + V ++L+ +GGKRLRP L L A + + + +A AIE IH ATL+HD Sbjct: 25 IHSPVDQLTQVGRHLLQAGGKRLRPALYLLCAKSRQVETASLLPIAVAIEMIHMATLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D++A RRG A WGN SVL GDFL ++AF V + + L L+ V C++ E Sbjct: 85 DVIDNAATRRGLPTANSRWGNHVSVLSGDFLFAKAFSTVAKHATPAMLRILTDVVCSMCE 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ + + + +EEDYL I KTA +A+ E+ L AG+ AL+ YG +G Sbjct: 145 GEILQIRDTFSAEQSEEDYLVRIAKKTADFIAASCELGGLSAGLAPDEVAALRRYGHAVG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQ+ DD+LD ++GK G D R G TLPV+ A Q +RE+ + + + Sbjct: 205 MAFQITDDILDITASSAQLGKPAGNDLRQGIITLPVLYALQHSPRREE--LRRLVISRDM 262 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYG----QKAKDSLRCLPDSSWKKSLMEVVDF 316 LK+ I++++ + EY AY Y Q+A+ +L D + +++L+ + DF Sbjct: 263 DEPGLKQGLAIVQDSGGI---EY-AYEYVSRYLQEARLALPAGLDGAIRQTLIAIADF 316 >gi|218258587|ref|ZP_03474930.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii DSM 18315] gi|218225357|gb|EEC98007.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii DSM 18315] Length = 324 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 102/296 (34%), Positives = 164/296 (55%), Gaps = 1/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+ + + ++ + GK +RP+L L A DN + A +E +HTATL+HDDV Sbjct: 28 SETNRLQSAIDQILNASGKHIRPLLVLLAAKACGQVTDNTINSAVLLELLHTATLIHDDV 87 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D++ RRG + ++ N+ SVLVGD++LS A I+T + + + +S + L+EGE Sbjct: 88 IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRSIQTGNLQIIGIVSNLGRDLSEGE 147 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 ++QL ++ + E Y+ VI+ KTA+L SA E+ S+ AG + + + +G LG Sbjct: 148 IKQLETAEESIIDESCYMQVIRKKTAMLLSACSEIGSISAGASGEMVEKCREFGEYLGYC 207 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD+ DY E N +GK G D R GK TLP++ A Q G K E + IN+ +V Sbjct: 208 FQIKDDIFDYFKEAN-IGKPTGNDIREGKVTLPLLHALQTGRKEEVDHCLRIINEKDFTV 266 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 EN+ + N + E R Y KA L+ LP+S ++ L+ + D+ ++R Sbjct: 267 ENIDLLIDFAKANGGIEYAEQRMLEYHDKAVGVLKTLPESEAREGLLLLADYIIER 322 >gi|258406530|ref|YP_003199272.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692] gi|257798757|gb|ACV69694.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692] Length = 322 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 105/294 (35%), Positives = 165/294 (56%), Gaps = 4/294 (1%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I V +++ +GGKRLRP+L + TA YR LA A+E +H+ATL+HDD++D + Sbjct: 29 LIVPVASHVLGAGGKRLRPILCVLTAEAFGYRDKEVYPLATALELLHSATLIHDDILDGA 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 ALRRG+ +A L +G Q +VL GD LL+ A + E + S A GE+ ++ Sbjct: 89 ALRRGQPSAHLAFGVQETVLAGDALLAMANKCIAGYGQPELMRIASEAIMATANGEIMEI 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + + ++EEDY +I KTAVL A+ E +++AG + RQA + G NLGIAFQLV Sbjct: 149 AQLREPRLSEEDYFQIITGKTAVLIQASCECGAVLAGAKGPQRQAAQDLGRNLGIAFQLV 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD LDY V + GK IG D R GK TLP++ + + E + I G +++ ++ Sbjct: 209 DDALDYTSAVEDSGKPIGGDLREGKLTLPLLFYLKSLPQEEAERVLAAIKHG--TLDEVE 266 Query: 269 KAFIIMRENRALVDTEYR--AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ II +A + R A Y ++A+ +L+ P + L ++++ R Sbjct: 267 QSAIITAIGQAHLAEATREVAAGYLEQARKALQFFPAGPCQTLLGSILEYVQYR 320 >gi|261209912|ref|ZP_05924212.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC341] gi|260840977|gb|EEX67509.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC341] Length = 243 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 95/242 (39%), Positives = 142/242 (58%), Gaps = 1/242 (0%) Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 +LHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ E S + L+ +S Sbjct: 1 MLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVN 60 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +++ V A+++YG Sbjct: 61 VIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYG 120 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Q G + + + I Sbjct: 121 KYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYAMQHGNSEQASMIREAIE 180 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + L + + M + +L T +A KA L LP+S +K++L+ + + Sbjct: 181 KAN-GMSRLNEILVAMEQTGSLQYTIEKAQREADKAIAELAILPESDYKQALITLAHMSV 239 Query: 319 QR 320 R Sbjct: 240 NR 241 >gi|154494276|ref|ZP_02033596.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC 43184] gi|154085960|gb|EDN85005.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC 43184] Length = 324 Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 101/296 (34%), Positives = 163/296 (55%), Gaps = 1/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+ + + ++ + GK +RP+L L TA DN + A +E +HTATL+HDDV Sbjct: 28 SETNRLQSAIDQILNASGKHVRPLLVLLTAKACGQVTDNTINSAVLLELLHTATLIHDDV 87 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D++ RRG + ++ N+ SVLVGD++LS A I+T + + + +S + L+EGE Sbjct: 88 IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRSIQTGNLQIIGIVSNLGRDLSEGE 147 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 ++QL ++ + E Y+ VI+ KTA+L SA E+ S+ AG + + + +G LG Sbjct: 148 IKQLETAEESIIDESCYMQVIRKKTAMLLSACAEIGSISAGASGEMVEKCREFGEYLGYC 207 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD+ DY E N +GK G D R GK TLP++ A Q G + E IN+ + Sbjct: 208 FQIKDDIFDYFKEAN-IGKPTGNDIREGKVTLPLLHALQTGRREEAEHCLHIINEKDFTT 266 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 EN+ + N + E R Y KA + L LP+S ++ L+ + D+ ++R Sbjct: 267 ENIDLLIDFAKANGGIEYAEQRMQVYHDKAVEVLMTLPESEAREGLLLLADYIVER 322 >gi|194334004|ref|YP_002015864.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271] gi|194311822|gb|ACF46217.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271] Length = 324 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 100/296 (33%), Positives = 167/296 (56%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 SD +I V++Y++ GK++RP+L + A + D A +E +H+ATL+HDDV Sbjct: 27 SDNSLIDKVMRYILKQQGKQVRPLLVMLGAKVCGGVADASYRAAIMVELLHSATLVHDDV 86 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VD + +RRG + VW N+ +VL+GD++LS+ ++ K +L +S ++EGE Sbjct: 87 VDGAEMRRGLASINAVWKNKIAVLIGDYMLSKGLLYSLDHKDYRSLHMVSDAVRRMSEGE 146 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + Q+ +++LD++EEDYL VI KTA L S + + +AL++YG LG+A Sbjct: 147 ILQIQKTRSLDISEEDYLKVISDKTASLLSTSCAMGGASVTDDEEKIEALRNYGEFLGLA 206 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD+LDY G+ N+ GK +G D ++ K TLP+I A + + E+ +S + K Sbjct: 207 FQIRDDLLDYTGDSNKTGKQLGIDIQDKKITLPLIYALGQAERSEQKRIRSILKSSKKRA 266 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +R++ L + A + KA +L DS ++SL +VDF ++R Sbjct: 267 MKSGEVMDFVRKSGGLEYSSEVAEGFASKATAALEVFDDSEARRSLELLVDFVMKR 322 >gi|194336606|ref|YP_002018400.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|194309083|gb|ACF43783.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 324 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 161/292 (55%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V +Y++ GK++RP + L A + ++ A +E +H+ATL+HDDVVD + Sbjct: 31 LVDKVTRYVLKQQGKQIRPAMVLLAAQLCGGVNESSYRAAIMVELLHSATLIHDDVVDGA 90 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 +RRG + +W N+ SVL+GD+LLS+ +E K L +S ++EGE+ Q+ Sbjct: 91 EMRRGLASINALWKNKISVLIGDYLLSKGLLYSLEYKDYGFLHMVSEAVRRMSEGEIFQI 150 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 +++LD++E DYL VI KTA L S+A + ++ A ALKSYG LG+AFQ+ Sbjct: 151 QKTRSLDISEADYLSVIADKTASLISSACAMGAMSATTDEVRIAALKSYGEYLGLAFQIR 210 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LDY G+ + GK +G D ++ K TLP+I A E+ +S + + Sbjct: 211 DDLLDYTGDSKKTGKQMGIDIKDKKITLPLIYALLHAPVAEQKMIRSILKSSRKRAVKSG 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + LV A + KA S+ P+S+ K SL+ +VDF ++R Sbjct: 271 EVIAFVTGKGGLVYAAEVAEGFAAKAVASISSFPESAAKTSLLRLVDFVMKR 322 >gi|332982510|ref|YP_004463951.1| polyprenyl synthetase [Mahella australiensis 50-1 BON] gi|332700188|gb|AEE97129.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON] Length = 322 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 172/311 (55%), Gaps = 3/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +DM+ V+ I + + + ++ DV+ L SGGKRLRP++ + ++ Y+ D + LA Sbjct: 13 QDMDSVDNYIKRALKTHQRLLSDVINQLAGSGGKRLRPLMVILSSRFGGYKRDEIIHLAA 72 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 AIE +H ATL+HDD++DD+ +RRG+ + WG +V GDFL S F ++ + S + Sbjct: 73 AIEILHMATLVHDDIIDDAPIRRGEPTVQSRWGKDVAVFTGDFLFSTVFSLLSKEVSFDD 132 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L +S V + EGE+ Q N V+ YL I+ KTA LF+ + + + AG Sbjct: 133 LYEVSRVVKQICEGEVDQYQHRYNTAVSVRSYLRRIRHKTADLFALSCVIGAKRAGCSKP 192 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + AL+++GM+ G+ FQ++DD+LD+ G+ E+GK G DF G TLP+I A TK Sbjct: 193 IYNALENFGMDFGMVFQIIDDILDFEGQQEELGKPAGADFEEGVYTLPLIYALD--TKYR 250 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 +N + +++ +++ + A ++ KA + ++ LPD+ K+ Sbjct: 251 LPLL-DVLNKDRYDASDVEAVKAMVKAAGGIEKARSIANNFAAKAVEDIKLLPDNEHKRI 309 Query: 310 LMEVVDFCLQR 320 ++ +++ ++R Sbjct: 310 MLAILNESVER 320 >gi|313205998|ref|YP_004045175.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868] gi|312445314|gb|ADQ81669.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868] gi|315022311|gb|EFT35339.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM] gi|325336561|gb|ADZ12835.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer RA-GD] Length = 325 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 102/302 (33%), Positives = 170/302 (56%), Gaps = 13/302 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTAT 78 S V ++ V ++++ + GK++RPM A ++ YRG A IE IHTAT Sbjct: 29 SKVPLLDKVTRFIVTTKGKQMRPMFAFLCAKLVGDVNEKTYRG------ASMIELIHTAT 82 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L+HDDVVD+S RR + +W N+ +VLVGD+LLS++ + + K + L +S Sbjct: 83 LVHDDVVDESFKRRNFFSINALWKNKIAVLVGDYLLSKSVLLSTDNKDFDLLSVISTTIR 142 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 ++EGEL QL ++ LD+TEE Y +I+ KTA L +A E+ L GV ++ + ++ +G Sbjct: 143 EMSEGELLQLEKARKLDITEEVYYEIIRQKTATLIAACCEIGVLSNGVDETMAKKMRDFG 202 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 G+AFQ+ DD+ DY + N +GK +G D + K TLP+I + ++++ ++ TI Sbjct: 203 TYTGMAFQIKDDLFDYLSK-NIIGKPVGIDIKEQKMTLPLIYTLKSANEKDRKYYFDTIK 261 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + + +K+ ++++ L + QKAKD L PDS K SL ++D+ + Sbjct: 262 RHNHNPKRVKELIDFVKQSGGLDYAMGVMKDFQQKAKDILEEFPDSEAKTSLNLMLDYVI 321 Query: 319 QR 320 +R Sbjct: 322 ER 323 >gi|21674031|ref|NP_662096.1| polyprenyl synthetase [Chlorobium tepidum TLS] gi|21647180|gb|AAM72438.1| polyprenyl synthetase [Chlorobium tepidum TLS] Length = 324 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 106/299 (35%), Positives = 170/299 (56%), Gaps = 14/299 (4%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALM------LEYRGDNHVLLACAIEFIHTATLLHD 82 ++ V +Y++ GK++RP L + A + + YRG A +E +H+ATL+HD Sbjct: 31 LVDKVTRYVLRQQGKQIRPTLVILAAKVCGGVHDVTYRG------AIMVELLHSATLIHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DVVD + +RRG + +W N+ SVL+GD+LLS+ +E K +L +S ++E Sbjct: 85 DVVDGAEMRRGIPSINALWKNKISVLIGDYLLSKGLLYSLENKDYRSLHLVSEAVRRMSE 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ +++LD+TEEDYL VI KT L + + + + + +LKSYG LG Sbjct: 145 GEILQIQKTRSLDITEEDYLSVIADKTGSLIATSCAIGAASSTDSEDEIASLKSYGEFLG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG-K 261 +AFQ+ DD+LDY G+ + GK +G D ++ K TLP+I A ++ K E+N KS + K Sbjct: 205 LAFQIRDDLLDYTGDSKKTGKQLGIDIKDRKITLPLIYALRQSDKSEQNKIKSILKSSRK 264 Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 SV + + + R+ E A + KA +S+ P+S K+SL +VDF ++R Sbjct: 265 RSVRSGEVIDFVTRKGGLDYAAEV-AEGFADKALESIAHFPESDAKRSLQLLVDFVMKR 322 >gi|256830774|ref|YP_003159502.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028] gi|256579950|gb|ACU91086.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028] Length = 326 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 114/321 (35%), Positives = 175/321 (54%), Gaps = 18/321 (5%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 LK++ +N I + I + +++ V +++ +GGKRLRPMLTL A L +RGDN LA Sbjct: 13 LKELPAINAAIAQEIDALPKLVRPVAAHVMEAGGKRLRPMLTLLFARALSFRGDNLQTLA 72 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 ++EF+H+ATL+HDD++D+S LRRGK AA ++G +VL GD LL+ A +V T + Sbjct: 73 SSLEFLHSATLMHDDILDNSELRRGKRAAHTLFGITPTVLAGDVLLALANEIVARTNNPA 132 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +S A GE+ +++ + +T +Y+ +I KTA L +A E + A Sbjct: 133 LTSCISKAIMQTATGEIMEIAAIRKAHITRAEYIEIITGKTAYLIQSACEFGVIAAEGSE 192 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 R K++G+NLGIAFQLVDD LDY + GK +G D R GK TLP++L + + Sbjct: 193 RARAGAKTFGLNLGIAFQLVDDALDYTSRADTSGKPLGGDLREGKFTLPLLLYLESLPED 252 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVD---------TEYRAYSYGQKAKDSLR 299 ++ + D NL +R+++ + D T A SY A +L Sbjct: 253 QREIVTRELTD-----VNLHP----VRQDQIIADVVGQGFAEKTRDEARSYLALASQALA 303 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP+ KK L +++F L R Sbjct: 304 VLPECLEKKLLGAMIEFVLTR 324 >gi|221633012|ref|YP_002522237.1| heptaprenyl diphosphate synthase component II [Thermomicrobium roseum DSM 5159] gi|221155353|gb|ACM04480.1| heptaprenyl diphosphate synthase component II [Thermomicrobium roseum DSM 5159] Length = 334 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 106/313 (33%), Positives = 177/313 (56%), Gaps = 2/313 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 D+++V +L+ + +I D+++ LI +GGKRLRP+L L A Y D V A Sbjct: 20 PDLQRVEDRLLEETALEFPLIGDILRTLILAGGKRLRPLLLLLAAKPFRYDLDRLVPAAA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IE +HTA+L+HDD +D +++RRG+ ++ ++VGD++ +++ + T + Sbjct: 80 GIELLHTASLIHDDSLDGASVRRGQPTLNALFDPSVVIMVGDYMFARSAMLAASTMNPRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L + ++ +G+LR+L ++ DV+ +DY H I KTA LF+ + E+ +++A + Sbjct: 140 LAVFAHCLGSICDGQLRELFAARRTDVSLDDYQHRIYGKTASLFAGSAEIGAILAEAPDD 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG--TK 247 + L+ +G +G+AFQ+VDDVLD+R NE+GK G+D R G TLP++L FQ G T Sbjct: 200 QIELLRDFGGAMGMAFQIVDDVLDFRATENEIGKPAGQDLRQGTVTLPILLFFQNGKATS 259 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 E+ F + I +G + L +A ++R + AL + A Y + AK L LP + + Sbjct: 260 EERAFVEQVIAEGAPDDDALARALQLIRTSGALEEALDYARRYVEDAKALLAGLPPTEGR 319 Query: 308 KSLMEVVDFCLQR 320 L V D L R Sbjct: 320 DMLAAVADHALAR 332 >gi|325955525|ref|YP_004239185.1| trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922] gi|323438143|gb|ADX68607.1| Trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922] Length = 325 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 103/320 (32%), Positives = 170/320 (53%), Gaps = 12/320 (3%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MK+ ED + M+ S+V ++ + Y++ GK++RPM A ML Sbjct: 16 MKLFEDKFFESMK-----------SNVSLLDRITYYIVRRKGKQMRPMFVFLIAKMLGEV 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + A IE IHTATL+HDDVVDDS +RRG + +W N+ +VLVGD+ LS+ + Sbjct: 65 NEKTYRAASFIELIHTATLVHDDVVDDSHMRRGFFSLNALWKNKIAVLVGDYFLSKTLII 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + K + LE +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A + Sbjct: 125 STQNKDFDLLETVSVAIKEISEGELLQIEKARKLDITEEVYFEIIRMKTATLIAACCKAG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L N V + L +G +GIAFQ+ DD+ DY + N +GK +G D + K TLP+I Sbjct: 185 ALSVSSDNMVAERLHKFGELVGIAFQIKDDLFDY-TQSNLIGKPVGIDIKEQKMTLPLIY 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 TK K + ++ + + +++ +++N + T+ Y Y +A L Sbjct: 244 TLNTTTKENKKWLIQSVKKHNNNKKRVREVIEFVKQNGGIEYTKKMMYQYANEAIAILHE 303 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P + + +L +V + ++R Sbjct: 304 FPQNECRDALELMVQYVMER 323 >gi|261749413|ref|YP_003257099.1| polyprenyl synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497506|gb|ACX83956.1| polyprenyl synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 325 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 109/303 (35%), Positives = 166/303 (54%), Gaps = 11/303 (3%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I SDV +I + Y++ GK++RPM A ML A IE IHTATL+HD Sbjct: 27 IKSDVPLINKITHYIVHRKGKQIRPMFVFLIAKMLGTIQKKTYHTASLIELIHTATLVHD 86 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D+S LRRG + +W N+ +VLVGD+LLS++ + E + L+ + ++E Sbjct: 87 DVIDNSYLRRGSFSINAIWKNKIAVLVGDYLLSKSLLLATENNYHDLLKIICRTIKDMSE 146 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GEL Q+ SK LD+TE+ Y +I KTA L +A+ E + + ++ +G G Sbjct: 147 GELLQMEKSKKLDITEKIYNQIIYHKTASLIAASCEGGARSVNANEDIALKMRKFGGLTG 206 Query: 203 IAFQLVDDVLDYRGEVNE--MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 IAFQ+ DD+ DY E NE GK IG DFR K TLP+I A Q+ ++ ++ + ++I + Sbjct: 207 IAFQIKDDLFDY-NESNENLTGKPIGIDFREKKMTLPLIYAIQKASQNDQKWILNSIKN- 264 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL---PDSSWKKSLMEVVDFC 317 + KK I+ + EY + ++L+ L PDS+ KKSL +V+F Sbjct: 265 ----YDEKKRHQIIAYVKKYGGIEYAIQKMIRIRNNALKILDSYPDSTIKKSLKTMVNFI 320 Query: 318 LQR 320 ++R Sbjct: 321 VER 323 >gi|27262424|gb|AAN87493.1| Farnesyl pyrophosphate synthetase [Heliobacillus mobilis] gi|111075007|gb|ABH04860.1| polyprenyl diphosphate synthase [Heliobacillus mobilis] gi|155241755|gb|ABT18037.1| heptaprenyl diphosphate synthase [Heliobacillus mobilis] Length = 320 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 177/319 (55%), Gaps = 4/319 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 ++ +D+ D+ KV + K + + + +L+ +GGKRLRP L Y Sbjct: 4 RLFQDIQ-NDLAKVEAELAKYADTSLPTLTAASSHLLHAGGKRLRPAFVLLAGRFHNYSL 62 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + + LA A+E IH A+L+HDDVVD+S RRG + WGN+ S+ GD L +++ ++ Sbjct: 63 ERLLPLAVAMEMIHMASLVHDDVVDESKTRRGIPTVKARWGNRISIHTGDHLFARSLLLI 122 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E + E L+ V+ + +GE++Q+S + +++ T DYL IK KTA+L SA+ ++ + Sbjct: 123 AELNDDKISEVLAKVSVEMCKGEIQQMSGTFDVNQTFRDYLFHIKRKTALLISASCQLGA 182 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + S+ +ALK YG +LG+AFQ+ DD+LD + E+GK +G D R G TLP++ A Sbjct: 183 MAVKADPSIVRALKMYGHHLGMAFQVTDDILDLTADEAELGKPVGSDLRQGIITLPILEA 242 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + + + + S E + +A I++ + A+ ++ A Y +KAKD L+ L Sbjct: 243 LW---ETKDPLLRLLVAKRDKSQEEVGQAIEIIKNSGAIDRSQKIARRYLEKAKDELKRL 299 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + SL + +F +R Sbjct: 300 PPVPTRDSLASIAEFIEKR 318 >gi|88803606|ref|ZP_01119131.1| polyprenyl synthetase [Polaribacter irgensii 23-P] gi|88780618|gb|EAR11798.1| polyprenyl synthetase [Polaribacter irgensii 23-P] Length = 325 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 166/304 (54%), Gaps = 16/304 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFIHT 76 S V ++ + Y++ GK++RPM A M+ YRG A +E IHT Sbjct: 28 SKVPLLNRITYYIVRRKGKQMRPMFVFLVAKMVSNGGFDERTYRG------AAVVELIHT 81 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 ATL+HDD+VDDS +RR + +W N+ +VLVGDFLLS+ + I+ + L+ +S+ Sbjct: 82 ATLVHDDIVDDSNMRRSFFSVNALWKNKIAVLVGDFLLSKGLLLSIDNNDFDLLKLISIA 141 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 ++EGEL Q+ ++ LD+TE Y +I+ KTA L +A + + G + ++ Sbjct: 142 VREMSEGELLQIEKARKLDITEAIYFDIIRKKTATLIAACCGIGAASVGANQDCIRKMRK 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 +G +GIAFQ+ DD+ DY ++GK G D + K TLP+I +K+EK + ++ Sbjct: 202 FGEYIGIAFQIKDDLFDYSDA--KIGKPTGIDIKEQKMTLPLIYTLNTCSKKEKAWLINS 259 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 I + +K+ ++++ + T + + QKA L+ PDS +KKSL ++D+ Sbjct: 260 IKKHNKDKKRVKEVIAFVKDHGGIAYTMTKMNEHKQKALALLQDFPDSEYKKSLETMIDY 319 Query: 317 CLQR 320 ++R Sbjct: 320 VVER 323 >gi|323143046|ref|ZP_08077750.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei YIT 12066] gi|322417147|gb|EFY07777.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei YIT 12066] Length = 323 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 108/329 (32%), Positives = 175/329 (53%), Gaps = 13/329 (3%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTL-ATALM 56 M + E L +M+KV +++ SD + + + +I +GGKR+RP L L A+ L+ Sbjct: 1 MALFEALIGSEMKKVEATLVEGF-SDSALEAHVNSLCLSIINAGGKRMRPALVLLASHLL 59 Query: 57 LEYRGDNHVL---LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113 Y + LA +E +HTATL+HDDV+D+S +RRG+ GN +VL GD++ Sbjct: 60 PSYTDEEETAVCKLAAGVELLHTATLIHDDVIDNSLMRRGRPTLNSTSGNHVAVLAGDYM 119 Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173 ++ F + + K + L +S TL GEL QL +++++ EDY I KT LF Sbjct: 120 FTRCFATIKDLKKADVLSIISDTLATLVTGELDQLKNEGDVNISVEDYYTTIYCKTGALF 179 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + ++ G + ALK+YG LG AFQ++DD LDY + +GKN GED ++ + Sbjct: 180 ELSASAPAVYLGEEEKYITALKNYGRYLGNAFQIIDDCLDYSSDSKTLGKNAGEDLQDKR 239 Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293 TLPVI A QR ++ EK I + +L+ + + L + + A G++ Sbjct: 240 ITLPVIFALQRCSEAEKEILIKAIENA-----DLETVISYINKYDTLKECKNAAEQSGEQ 294 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 A L P++ +K++L+ +V+ L R N Sbjct: 295 AVKELNVFPENEYKQALISLVERALNRKN 323 >gi|219669380|ref|YP_002459815.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] gi|219539640|gb|ACL21379.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] Length = 322 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 105/310 (33%), Positives = 180/310 (58%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+++V + I +D ++ L+ +GGKRLRP TL Y D + +A A Sbjct: 13 DLQRVEKELHAYIKTDFPILDQSAVQLLEAGGKRLRPAFTLLAGKFYGYPIDRLLPVAMA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ATL+HDDVVD S RRG+ + WGN S+ GD+LL++A ++ + E Sbjct: 73 LELIHMATLVHDDVVDASMTRRGRPTVKAKWGNVVSIATGDYLLAKALELLAQINHPEVS 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ V+ +++GE++Q+ S +++ + Y + IK KTA+L SA+ ++ +LI+ Sbjct: 133 KILAEVSVEMSQGEIQQIKASNDVNQNLKQYYYRIKRKTAMLISASCKLGALISAAPRRE 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL +YG LG+AFQ+VDDVLD E +E+GK +G D R G TLP+ILA + +RE+ Sbjct: 193 VWALGAYGHALGMAFQIVDDVLDVTAEASELGKPVGGDIRQGIMTLPLILALHQSGERER 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + +++++A +++++ A+ D+ + Y KA L+ LP+ +K+L Sbjct: 253 --LHELLVKPEKDEDDVREAIKMIKDSGAIADSMHYVDLYISKANSYLQELPNVPTRKAL 310 Query: 311 MEVVDFCLQR 320 +++ F +R Sbjct: 311 VDLAYFVKER 320 >gi|163781995|ref|ZP_02176994.1| octoprenyl-diphosphate synthase [Hydrogenivirga sp. 128-5-R1-1] gi|159882527|gb|EDP76032.1| octoprenyl-diphosphate synthase [Hydrogenivirga sp. 128-5-R1-1] Length = 308 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 172/309 (55%), Gaps = 6/309 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +E + +L+ + V+++ + +YLI GGKRLRP++T+ + M ++ + L + Sbjct: 4 LEAIERRLLEELNPKVKLVLETGRYLIDGGGKRLRPLITMLSCGMCGGEPEDALPLGVGL 63 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E+IH A+LLHDDVVD + RRG+ +A L++GN+ +VL GD++ ++A + + + + Sbjct: 64 EYIHAASLLHDDVVDGAKKRRGRESANLIFGNEVAVLTGDYMYAKALHLFATHGTIDMIR 123 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +S +AE ++ +LS L +TEE+Y +I KTAVLF A + V L G R Sbjct: 124 IVSRAVMDMAEAQVLELSRVGEL-ITEEEYFQIIDGKTAVLFGACVSVGGLAGGCDEEGR 182 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L G+ +G AFQL+DD+LDY G + GK +G D R GK T P++ + Sbjct: 183 --LYEVGLRMGRAFQLIDDLLDYAGNSEKTGKPVGNDLREGKTTYPLLSVLDSLDRVRVE 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 IN +E+L++ + + + V T+ RA +AK+ L P++ +K+ ++ Sbjct: 241 SLLKEINPSAEEIESLRREVLSLGGD---VKTKERAVEELSRAKELLSVFPENQYKEEIL 297 Query: 312 EVVDFCLQR 320 +++DF R Sbjct: 298 KLMDFVAFR 306 >gi|86134465|ref|ZP_01053047.1| polyprenyl synthetase [Polaribacter sp. MED152] gi|85821328|gb|EAQ42475.1| polyprenyl synthetase [Polaribacter sp. MED152] Length = 325 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 106/309 (34%), Positives = 172/309 (55%), Gaps = 22/309 (7%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + Y++ GK++RPM A M+ YRG A +E I Sbjct: 26 MLSKVPLLNRITYYIVRRKGKQMRPMFVFLVAKMVSNGGFDERTYRG------ASVVELI 79 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVDDS RRG + +W N+ +VLVGDFLLS+ + I+ + + L+ +S Sbjct: 80 HTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDFLLSKGLLLSIDNEDFDLLKLIS 139 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A + + G Q + Sbjct: 140 IAVREMSEGELLQIEKARKLDITEDIYFDIIRQKTATLIAACCGIGAASVGANQDTVQQM 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + +G +GIAFQ+ DD+ DY E ++GK G D + K TLP+I + +EK + Sbjct: 200 RKFGEYIGIAFQIKDDLFDYSDE--KIGKPTGIDIKEQKMTLPLIHTLNNCSAKEKAWII 257 Query: 255 STI---NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 +T+ N K+ V+ L AF+ +EN + T + +Y KA L +S +K SL+ Sbjct: 258 NTVKKHNKNKVRVKEL-IAFV--KENGGIDYTISQMNAYKSKAIAILNNYSESPYKASLL 314 Query: 312 EVVDFCLQR 320 +++D+ ++R Sbjct: 315 QMIDYVVER 323 >gi|89894978|ref|YP_518465.1| hypothetical protein DSY2232 [Desulfitobacterium hafniense Y51] gi|89334426|dbj|BAE84021.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 322 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 104/310 (33%), Positives = 180/310 (58%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+++V + I +D ++ L+ +GGKRLRP TL Y D + +A A Sbjct: 13 DLQRVEKELHAYIKTDFPILDQSAVQLLEAGGKRLRPAFTLLAGKFYGYPIDRLLPVAMA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ATL+HDDVVD S RRG+ + WGN S+ GD+LL++A ++ + E Sbjct: 73 LELIHMATLVHDDVVDASMTRRGRPTVKAKWGNVVSIATGDYLLAKALELLAQINHPEVS 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ V+ +++GE++Q+ S +++ + Y + IK KTA+L SA+ ++ +L++ Sbjct: 133 KILAEVSVEMSQGEIQQIKASNDVNQNLKQYYYRIKRKTAMLISASCKLGALVSAAPRRE 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL +YG LG+AFQ+VDDVLD E +E+GK +G D R G TLP+ILA + +RE+ Sbjct: 193 VWALGAYGHALGMAFQIVDDVLDVTAEASELGKPVGGDIRQGIMTLPLILALHQSGERER 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + +++++A +++++ A+ D+ + Y KA L+ LP+ +K+L Sbjct: 253 --LHELLVKPEKDEDDVREAIKMIKDSGAIADSMHYVDLYISKANSYLQELPNVPTRKAL 310 Query: 311 MEVVDFCLQR 320 +++ F +R Sbjct: 311 VDLAYFVKER 320 >gi|301064156|ref|ZP_07204603.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium NaphS2] gi|300441776|gb|EFK06094.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium NaphS2] Length = 325 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 167/309 (54%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 E++N + K S V + ++ Y + GKRLRP++ + + + Y G++ L+ Sbjct: 15 FERINRELNKVFDSRVPLAKEIGTYALLGEGKRLRPLIFVLSCQLCGYGGEDLYPLSTVF 74 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E+IHT++LLHDDV+D++ +RR K ++ +WGNQ +VL GDFL S+A + + S + Sbjct: 75 EYIHTSSLLHDDVLDNAEIRRRKPSSNQIWGNQAAVLEGDFLFSKALSIAVSANSVPFIS 134 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +L+ ++EG++ +L + +L+ + Y+ +I +KTAVL SAA ++++G + Sbjct: 135 SLTKATMRMSEGQILELVHTDDLETGRDTYMQIINAKTAVLISAACGCGAIVSGSSPEIE 194 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +L +G ++GIAFQLVDD+LDY GK +G+D GK TLP+I + + EK Sbjct: 195 ASLTRFGRSVGIAFQLVDDLLDYTSSEEIFGKPVGKDLLEGKITLPLIYTLAQLEQNEKK 254 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + K + +R+ L A Y A L+ DS+ K +L+ Sbjct: 255 RFSEFFEHRKTDKAAYEALLDRVRKGGVLEKIREEAQGYVDDAAVCLKTFQDSAVKTNLL 314 Query: 312 EVVDFCLQR 320 ++ + + R Sbjct: 315 TLIQYIIDR 323 >gi|134300012|ref|YP_001113508.1| trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1] gi|134052712|gb|ABO50683.1| Trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1] Length = 320 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 170/307 (55%), Gaps = 2/307 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KD++ V I + S ++ +L+ +GGKRLRP L Y + + LA Sbjct: 10 KDLQVVEHEIKTIVQSRDPLLTQTSIHLLNAGGKRLRPAFALLAGKFYHYSLEKLLPLAV 69 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+E IH ATL+HDDVVDDS RRG + WGN+ S+ GD+L +++ ++ + ++ Sbjct: 70 ALELIHMATLVHDDVVDDSLTRRGTPTVKANWGNRISMHTGDYLFAKSLVLISQYENPLI 129 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + L+ + + EGE+ Q+S + + + + DY + IK KTA+L +A+ ++ ++ G Sbjct: 130 AQVLADTSVMMCEGEMHQISTAYSAEQSWRDYFYRIKRKTALLIAASCQLGAVAVGAPEE 189 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L+ YG +LG+AFQ+ DD+LD + + +GK IG D R G T+PVI + +R +R Sbjct: 190 EYKNLRRYGHHLGMAFQITDDILDMVADQSLLGKPIGGDLRQGILTMPVIYSLERSPQRT 249 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + + + + E +K+A I++E + Y +KAK +L LP+ K++ Sbjct: 250 R--LRQLVEIEEKTDEQVKEAIEIIKEAGGIEYAFNATKQYIEKAKKNLTHLPNKPVKET 307 Query: 310 LMEVVDF 316 ++ DF Sbjct: 308 FYQIADF 314 >gi|262383148|ref|ZP_06076285.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B] gi|301311752|ref|ZP_07217677.1| polyprenyl synthetase [Bacteroides sp. 20_3] gi|262296026|gb|EEY83957.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B] gi|300830312|gb|EFK60957.1| polyprenyl synthetase [Bacteroides sp. 20_3] Length = 324 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 106/319 (33%), Positives = 169/319 (52%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + +E+ + E+ N + S+ + + ++ S GK +RP+L L TA + Sbjct: 5 RKIEEPVSAEFERFNKDFEASLRSETTRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVT 64 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A Sbjct: 65 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 124 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 I+T + +S + L+EGE++QL ++ + E YL VIK KTA L SA E+ + Sbjct: 125 IQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGA 184 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G V + +G LG FQ+ DD+ DY E N +GK G D R GK TLP++ A Sbjct: 185 ISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFKEAN-IGKPTGNDIREGKVTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++G + E + I + EN+ + N + E R Y KA D L L Sbjct: 244 LRQGREEEAARYLDMILRKDFAAENVDSLIEFAKANGGIEYAEARMKEYHDKAVDVLLRL 303 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S + SL+++ D+ + R Sbjct: 304 PESGARTSLIQLADYIMTR 322 >gi|145219780|ref|YP_001130489.1| dimethylallyltranstransferase [Prosthecochloris vibrioformis DSM 265] gi|145205944|gb|ABP36987.1| Dimethylallyltranstransferase [Chlorobium phaeovibrioides DSM 265] Length = 324 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 167/298 (56%), Gaps = 12/298 (4%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTATLLHD 82 ++ V +Y++ GK++RP++ L +A + YRG A +E +H+ATL+HD Sbjct: 31 LVDKVTRYVLRQQGKQIRPVMVLLSASVAGGIRESSYRG------AIMVELLHSATLIHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DVVD + +RRG + +W N+ SVL+GD+LLS+ +E+K L +S ++E Sbjct: 85 DVVDGAEMRRGIASINAIWKNKISVLIGDYLLSKGLLYSLESKDYGFLHIVSDAVRRMSE 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ +++LD++EEDY+ VI KTA L +++ + + A A+K YG +LG Sbjct: 145 GEILQIQKTRSLDISEEDYIRVISDKTASLIASSCAMGAESATEDEVKIAAMKKYGESLG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQ+ DD LDY G+ + GK +G D R+ K TLP+I A + + E+ +S + + + Sbjct: 205 LAFQIRDDTLDYTGDSRKTGKEMGIDIRDRKITLPLIHALSKASPAEQRRVRSILKNSRK 264 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + +R L A Y +A ++L DS KK+L+ +VDF + R Sbjct: 265 RSQLRGEVMDFVRRMGGLDYAGAVAEGYAAEAVEALDVFGDSEAKKALLNLVDFVMNR 322 >gi|255013149|ref|ZP_05285275.1| polyprenyl synthetase [Bacteroides sp. 2_1_7] Length = 345 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 106/319 (33%), Positives = 169/319 (52%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + +E+ + E+ N + S+ + + ++ S GK +RP+L L TA + Sbjct: 26 RKIEEPVSAEFERFNKDFEASLRSETTRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVT 85 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A Sbjct: 86 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 145 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 I+T + +S + L+EGE++QL ++ + E YL VIK KTA L SA E+ + Sbjct: 146 IQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGA 205 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G V + +G LG FQ+ DD+ DY E N +GK G D R GK TLP++ A Sbjct: 206 ISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFKEAN-IGKPTGNDIREGKVTLPLLYA 264 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++G + E + I + EN+ + N + E R Y KA D L L Sbjct: 265 LRQGREEEAARYLDMILRKDFAAENVDSLIEFAKANGGIEYAEARMKEYHDKAVDVLLRL 324 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S + SL+++ D+ + R Sbjct: 325 PESGARTSLIQLADYIMTR 343 >gi|323701812|ref|ZP_08113482.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] gi|323533116|gb|EGB22985.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] Length = 320 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/280 (33%), Positives = 160/280 (57%), Gaps = 2/280 (0%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 L+ +GGKRLRP L + + + + LA A+E IH ATL+HDDVVDDS RRG Sbjct: 37 LLNAGGKRLRPAFALLAGRLYDADVEKLIPLAVALELIHMATLVHDDVVDDSMTRRGTPT 96 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 + WGN+ S+ GD+L +++ ++ K E L+ + + EGE+ Q+S + + + Sbjct: 97 VKANWGNKISMHTGDYLFAKSLVLISTYKEPLIAELLAKTSVKMCEGEIHQISTAYSANQ 156 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + DY + I+ KTA+L +A+ ++ ++ AG + L +G LG+AFQ+ DD+LD Sbjct: 157 SWRDYFYRIERKTALLIAASCQLGAVAAGAPAKDHKRLGKFGHQLGMAFQITDDILDMVA 216 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + E+GK IG D R G T+PVI + ++ +RE+ + + + + + +K+A +++E Sbjct: 217 DQRELGKPIGGDLRQGILTMPVIYSLEKSPRRER--LRELVEIREKTEDQVKEAIELIKE 274 Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 + + A Y KAK++L+ LPD KK ++ DF Sbjct: 275 AGGIQFSFEVAQRYIAKAKNNLKYLPDRPVKKVFEQIADF 314 >gi|298373963|ref|ZP_06983921.1| polyprenyl synthetase [Bacteroides sp. 3_1_19] gi|298268331|gb|EFI09986.1| polyprenyl synthetase [Bacteroides sp. 3_1_19] Length = 324 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 106/319 (33%), Positives = 169/319 (52%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + +E+ + E+ N + S+ + + ++ S GK +RP+L L TA + Sbjct: 5 RKIEEPVSAEFERFNKDFEASLRSETTRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVT 64 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A Sbjct: 65 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 124 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 I+T + +S + L+EGE++QL ++ + E YL VIK KTA L SA E+ + Sbjct: 125 IQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGA 184 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G V + +G LG FQ+ DD+ DY E N +GK G D R GK TLP++ A Sbjct: 185 ISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFKEAN-IGKPTGNDIREGKVTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++G + E + I + EN+ + N + E R Y KA D L L Sbjct: 244 LRQGREEEAARYLDMILRKDFAAENVDSLIEFAKANGGIEYAEARMKEYHDKAVDVLLRL 303 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S + SL+++ D+ + R Sbjct: 304 PESEARTSLIQLADYIMTR 322 >gi|149371556|ref|ZP_01890972.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49] gi|149355183|gb|EDM43743.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49] Length = 325 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 106/319 (33%), Positives = 173/319 (54%), Gaps = 16/319 (5%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRG 61 K+ME + + S V ++ + Y++ GK++RPM A M + YRG Sbjct: 13 KEMELFEKKFRESMTSQVSLLNRITHYIVNRKGKQMRPMFVFLIAKMCDEGNVNERTYRG 72 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + Sbjct: 73 ------ASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLLS 126 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 I+ + L+ +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A + + Sbjct: 127 IDHGDFDLLKIISVAVREMSEGELLQIEKARRLDITEEIYFEIIRQKTATLIAACCAMGA 186 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + ++++G +G AFQ+ DD+ DY G+ +GK G D + K TLP+I Sbjct: 187 KSVNASEGQVENMRAFGELIGTAFQIKDDLFDY-GDT-AIGKPTGIDIKEQKMTLPLIYV 244 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 +++EK + +++ + + + +K+ ++EN L E SY QKA L Sbjct: 245 LNNVSEKEKRWLINSVKNHNTNKKRVKEVITFVKENGGLDYAEQIMRSYQQKALLLLSDF 304 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K SLM +V++ + R Sbjct: 305 PESPYKDSLMMMVNYVIDR 323 >gi|332702907|ref|ZP_08422995.1| Trans-hexaprenyltranstransferase [Desulfovibrio africanus str. Walvis Bay] gi|332553056|gb|EGJ50100.1| Trans-hexaprenyltranstransferase [Desulfovibrio africanus str. Walvis Bay] Length = 334 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 106/320 (33%), Positives = 170/320 (53%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M++L + + +N + + ++ +++ +GGKRLRP+L + A L ++ Sbjct: 13 MRVLAAYIEQQLPAINDFLARETDKLDPLVRPAAAHVLAAGGKRLRPVLAILCARALGHK 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ LAC++EF+H+ATLLHDD++D + LRRGK AA +V+ +VL GD LL+ A + Sbjct: 73 GEAIYPLACSLEFLHSATLLHDDILDGAVLRRGKAAAHIVFSRTEAVLAGDVLLALANQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V LS GE+ ++ ++ +D + E YLH+I KTA L A+ V Sbjct: 133 VASYGDPRLTTCLSEAIMRTVAGEVAEIVNTREMDSSLETYLHIITGKTAYLLEASCVVG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+AGV + + +A +G+N+GIAFQ+VDD +DY + GK G D R GK TLP+I Sbjct: 193 ALLAGVSDELIKAASVFGLNMGIAFQIVDDAMDYTSASSVSGKPAGGDLREGKLTLPLIY 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + + + S I +S E L + ++ + A Y KA +L Sbjct: 253 HLESLSPARREALLSDIRSKALSEEALAQLLADIQSSSCTERARALAGEYAAKAARALEA 312 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P+S +K L ++F LQR Sbjct: 313 FPESEERKVLDCALEFVLQR 332 >gi|150009558|ref|YP_001304301.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503] gi|256838290|ref|ZP_05543800.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp. D13] gi|149937982|gb|ABR44679.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503] gi|256739209|gb|EEU52533.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp. D13] Length = 324 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 106/319 (33%), Positives = 168/319 (52%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + +E+ + E+ N + S+ + + ++ S GK +RP+L L TA + Sbjct: 5 RKIEEPVSAEFERFNKDFEASLRSETTRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVT 64 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A Sbjct: 65 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 124 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 I+T + +S + L+EGE++QL ++ + E YL VIK KTA L SA E+ + Sbjct: 125 IQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGA 184 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G V + +G LG FQ+ DD+ DY E N +GK G D R GK TLP++ A Sbjct: 185 ISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFKEAN-IGKPTGNDIREGKVTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++G + E + I EN+ + N + E R Y KA D L L Sbjct: 244 LRQGREEEAARYLDMILRKDFGAENVDSLIEFAKANGGIEYAEARMKEYHDKAVDVLLRL 303 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S + SL+++ D+ + R Sbjct: 304 PESEARTSLIQLADYIMTR 322 >gi|310642561|ref|YP_003947319.1| heptaprenyl diphosphate synthase component ii (spore germination protein c3) [Paenibacillus polymyxa SC2] gi|309247511|gb|ADO57078.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Paenibacillus polymyxa SC2] Length = 324 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 171/314 (54%), Gaps = 6/314 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KDM + + + I S +I D +L+ +GGKRLRP+ L EY D +A Sbjct: 12 KDMNFIEEELYRSIDSREPLINDTSLHLLKAGGKRLRPVFVLLGGKFGEYDLDKLKRIAV 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IH+A+L+HDDV+DD+ +RRG+ + W N+ ++ GD++ ++A + + + Sbjct: 72 PLELIHSASLVHDDVIDDAEMRRGQPTVKSKWDNRVAMYTGDYIYARALSIAAGLPNPDI 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 LS ++ GE+ Q+ N+D + +YL I+ KTA+L + + ++ ++ AG + Sbjct: 132 HRVLSKALVQMSIGEMEQIRDFFNVDQSVRNYLLRIRRKTALLIAVSCQLGAMAAGARER 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L +YG N+G+AFQ+ DD+LD G ++GK G D R G TLPVI A ++ R+ Sbjct: 192 VNSLLYTYGYNVGMAFQIQDDLLDLCGTEKKIGKPPGSDMRQGNITLPVIYALEQPELRD 251 Query: 250 K---NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 W+ DG+ + +KA +++++ + E A Y KA ++L LPD Sbjct: 252 DLLAEIWRIQDGDGQ---GDTRKAVDMIKKSEGITKAEILADRYINKALNALDLLPDVKT 308 Query: 307 KKSLMEVVDFCLQR 320 KK+L ++ F +R Sbjct: 309 KKTLRDIAHFVTRR 322 >gi|78187081|ref|YP_375124.1| trans-hexaprenyltranstransferase [Chlorobium luteolum DSM 273] gi|78166983|gb|ABB24081.1| Trans-hexaprenyltranstransferase [Chlorobium luteolum DSM 273] Length = 324 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 101/295 (34%), Positives = 166/295 (56%), Gaps = 6/295 (2%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V +Y++ GK++RP + L +A + D A +E +H+ATL+HDDVVD + Sbjct: 31 LVDKVTRYVLRQQGKQIRPAMVLLSAAVSGGVTDATYRAAIMVELLHSATLIHDDVVDGA 90 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 +RRG + +W N+ SVL+GD+LLS+ +++ L +S ++EGE+ Q+ Sbjct: 91 EMRRGLPSINAIWKNKISVLIGDYLLSRGLLYSLDSGDYGFLHQVSDAVRRMSEGEILQI 150 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 +++LD+TEEDYL VI KTA L +++ + +L A A+K YG +LG+AFQ+ Sbjct: 151 QKTRSLDITEEDYLSVISDKTASLIASSCAMGALSATSDEKSILAMKRYGEHLGLAFQIR 210 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENL 267 DD+LDY G+ + GK +G D R+ K TLP+I A E +S + N GK L Sbjct: 211 DDLLDYTGDSKKTGKEMGIDIRDKKITLPLIHALSNAAPSEARRIRSILKNSGK---RAL 267 Query: 268 KKAFII--MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 K+ +I ++ L A + +++ +L+ P+ K +LM +VDF + R Sbjct: 268 KRGEVIEFVKRMDGLTYAAGVAERFADESRAALQPFPEGKAKMALMNLVDFVMNR 322 >gi|269926471|ref|YP_003323094.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269790131|gb|ACZ42272.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 322 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 108/318 (33%), Positives = 175/318 (55%), Gaps = 18/318 (5%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++ +V +L+ + ++ + VV+ LI +GGKRLRP L + + + + A A Sbjct: 13 ELRQVEQKLLESVPEEIPELASVVRSLILAGGKRLRPALVFLSGSINSPDHEKLLNAAVA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +HTATL+HDD +D + +RRG A ++G +L+GDFL ++A T EA+ Sbjct: 73 VELLHTATLIHDDTIDQADVRRGIATANSIFGPGVVILLGDFLFAKAAHYAAMTSDPEAI 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + + V + +GELRQ SL K+ V +EE+Y I +KTA LF E ++++ Sbjct: 133 DLFAKVLMVIVDGELRQ-SLGKHNGVPSEEEYYRRIYAKTAALFECCTETGAILSKAPEP 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR---GT 246 R+AL +YG LG+AFQ++DD+LD+ ++GK G D R G TLPVIL Q G Sbjct: 192 HRRALTTYGKKLGLAFQIIDDLLDFT-STEQIGKPAGNDIRQGTITLPVILFLQSAAVGD 250 Query: 247 KREKNFWKSTINDGKISVENLKK----AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 R ++ K + L K A I++ + AL +A + ++AK +L LP Sbjct: 251 PRAEHV--------KAVISGLSKDYDGAIDIIKSSGALEKARDKAAALIEEAKAALLVLP 302 Query: 303 DSSWKKSLMEVVDFCLQR 320 +S ++++ME+ F L+R Sbjct: 303 NSDSREAMMEIAQFTLER 320 >gi|193212799|ref|YP_001998752.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] gi|193086276|gb|ACF11552.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] Length = 324 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 160/292 (54%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V +Y++ GK++RP L + A + GD A +E +H+ATL+HDDVVD + Sbjct: 31 LVDKVTRYVLRQQGKQIRPTLVILGAKVCGGVGDVTYRGAIMVELLHSATLIHDDVVDGA 90 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 +RRG + +W N+ SVL+GD+LLS+ +E +L +S ++EGE+ Q+ Sbjct: 91 EMRRGIPSINALWKNKISVLIGDYLLSKGLLYSLENSDYRSLHLVSEAVRRMSEGEILQI 150 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 +++LD+TEEDYL VI KT L + + + + A LK YG LG+AFQ+ Sbjct: 151 QKTRSLDITEEDYLSVIADKTGSLIATSCAIGAASATDSEEEIARLKHYGEFLGLAFQIR 210 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LDY G+ + GK +G D ++ K TLP+I A ++ K E+N KS + K Sbjct: 211 DDLLDYTGDSKKTGKQLGIDIKDRKITLPLIYALRQSDKAEQNKIKSILKSSKKRSVRSG 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + L A + KA +S+ P+S ++SL +VDF ++R Sbjct: 271 EVIDFVTRKGGLEYAATVAEGFADKALESIANFPESPARRSLELLVDFVMKR 322 >gi|1707833|emb|CAA69541.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus solfataricus P2] Length = 332 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 105/315 (33%), Positives = 178/315 (56%), Gaps = 10/315 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 VNF I + S+ + + + +L +GGKRLRP++ ++++ ++ + A A+E + Sbjct: 17 VNFRIKNFVKSNFKTLEEASFHLFTAGGKRLRPLVLVSSSDLIGGDRERAYKAAAAVEIL 76 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEAL 130 H TL+HDD++D+ LRRG + WG ++L GD+L ++AF + E+ Sbjct: 77 HNFTLVHDDIMDNDGLRRGLPTVHVKWGEPMAILAGDYLHAKAFESLNESLKGLDGNTFY 136 Query: 131 EALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A S+ ++ +EG+ +S LDVTEE+Y+ +IK KTA+LFS + + +I Sbjct: 137 KAFSIFITSIEIISEGQAMDMSFENRLDVTEEEYIQMIKGKTAMLFSCSAALGGIINKAN 196 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + V + L YG+NLGI+FQ+VDD+L G+ E+GK I D R GK T+ VI T+ Sbjct: 197 DDVVKKLTEYGLNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTILVIKTLSEATE 256 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSS 305 EK ST+ + + E+L++A I+R++ +L A Y A ++LR +P + + Sbjct: 257 DEKKILVSTLGNKEAKKEDLERASEIIRKH-SLQYAYDLAKKYSDLAIENLREIPVSNKT 315 Query: 306 WKKSLMEVVDFCLQR 320 +K+L + F +QR Sbjct: 316 AEKALKYLAQFTIQR 330 >gi|238927608|ref|ZP_04659368.1| trans-hexaprenyltranstransferase [Selenomonas flueggei ATCC 43531] gi|238884533|gb|EEQ48171.1| trans-hexaprenyltranstransferase [Selenomonas flueggei ATCC 43531] Length = 321 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 104/322 (32%), Positives = 168/322 (52%), Gaps = 12/322 (3%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--- 62 D+ +D+E + K I S+ +I D+ +L+ SGGKRLRP L +L RG Sbjct: 3 DVIQEDLEAFEPRLEKAIVSETALITDIGMHLVSSGGKRLRPAL-----FLLAARGGASF 57 Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 + +A A+E IHTA+L+HDDV+D++ RRG WGNQ ++L GD++ ++AF Sbjct: 58 DRARAMPVAVALELIHTASLVHDDVIDEADTRRGAETTNAKWGNQVAILSGDYIFARAFK 117 Query: 120 MVIETKSQEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +V E ++ L+ + CTL+EGE+ Q + +E Y I+ KTA E Sbjct: 118 LVAEEGYDSSVYVKLAHLVCTLSEGEILQDHTVYQIPTSEHAYYERIRKKTADFLEICCE 177 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + I G+ + + YG +G+AFQ+ DD+LD+R ++GK G D G TLPV Sbjct: 178 LGGFIGGMSPADTAQMAEYGHAIGMAFQITDDLLDFRRSSEDIGKPAGHDLAQGYVTLPV 237 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 I A K E+ + I + K++ +A ++R L + RA +Y + AK++L Sbjct: 238 IRALAVLEKAERTELATLITNPKMTESEAARALALVRGTDGLDYAQKRADAYLEHAKNAL 297 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 D+ +++ + DF +R Sbjct: 298 PAGLDARIRETCLMAADFIGRR 319 >gi|228473247|ref|ZP_04058002.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624] gi|228275397|gb|EEK14189.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624] Length = 327 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 171/307 (55%), Gaps = 17/307 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + Y++ GK++RPM A ++ YRG A IE I Sbjct: 27 MSSRVALLNRITHYIVNRKGKQMRPMFVFLVAKLVSEGLVQERTYRG------AAVIELI 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + I+ + L +S Sbjct: 81 HTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNGDFDLLRIIS 140 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQA 193 + ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A + + +NS V + Sbjct: 141 VAVREMSEGELLQMEKARRLDITEEVYYEIIRQKTATLIAACCAMGACSVAPENSQVIEQ 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 ++ +G +G+AFQ+ DD+ DY E +GK G D + K TLP+I T++++++ Sbjct: 201 MRLFGEYVGMAFQIKDDLFDYTEEA--IGKPTGIDIKEQKMTLPLIYTLNMVTEKDRHWL 258 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 ++I + + +K+ ++ + + T+ + Y KA L PDS +KK+L+++ Sbjct: 259 INSIKNHNTDKKRVKEVIAFVKAHGGIDYTQEKMKEYQAKALAILDRFPDSPYKKALLQI 318 Query: 314 VDFCLQR 320 V + ++R Sbjct: 319 VTYVIER 325 >gi|15897028|ref|NP_341633.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus solfataricus P2] gi|284173372|ref|ZP_06387341.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus solfataricus 98/2] gi|14423727|sp|P95999|GGPS_SULSO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase gi|13813193|gb|AAK40423.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus solfataricus P2] gi|261601682|gb|ACX91285.1| Dimethylallyltranstransferase [Sulfolobus solfataricus 98/2] Length = 332 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 105/315 (33%), Positives = 177/315 (56%), Gaps = 10/315 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 VNF I + S+ + + + +L +GGKRLRP++ ++++ ++ + A A+E + Sbjct: 17 VNFRIKNFVKSNFKTLEEASFHLFTAGGKRLRPLVLVSSSDLIGGDRERAYKAAAAVEIL 76 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEAL 130 H TL+HDD++D+ LRRG + WG ++L GD+L ++AF + E Sbjct: 77 HNFTLVHDDIMDNDGLRRGLPTVHVKWGEPMAILAGDYLHAKAFEALNEALKGLDGNTFY 136 Query: 131 EALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A S+ ++ +EG+ +S LDVTEE+Y+ +IK KTA+LFS + + +I Sbjct: 137 KAFSIFITSIEIISEGQAMDMSFENRLDVTEEEYIQMIKGKTAMLFSCSAALGGIINKAN 196 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + V + L YG+NLGI+FQ+VDD+L G+ E+GK I D R GK T+ VI T+ Sbjct: 197 DDVVKKLTEYGLNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTILVIKTLSEATE 256 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSS 305 EK ST+ + + E+L++A I+R++ +L A Y A ++LR +P + + Sbjct: 257 DEKKILVSTLGNKEAKKEDLERASEIIRKH-SLQYAYDLAKKYSDLAIENLREIPVSNKT 315 Query: 306 WKKSLMEVVDFCLQR 320 +K+L + F +QR Sbjct: 316 AEKALKYLAQFTIQR 330 >gi|116292709|gb|ABJ97673.1| polyprenyl synthase [uncultured bacterium] Length = 328 Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 173/311 (55%), Gaps = 1/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 K+M++ + + + S V ++ + Y+I GK +RP+LT +A +L ++ + A Sbjct: 17 KEMKQFDSYFKESMKSKVRLLDIINNYIIKRKGKEVRPILTFLSARLLGDIQESTYVAAA 76 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 + +HTATL+HDDVVD++ RRG + +W ++ +VLVGD+LLS+ + +E K + Sbjct: 77 LTQLLHTATLIHDDVVDEAYERRGFFSINALWKSKAAVLVGDYLLSKGLLVALENKEYDQ 136 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ +S ++EGEL QL S+ LD+TE+ Y +I KTA L ++ ++ +L G Sbjct: 137 LQVVSDAVREMSEGELLQLEKSRKLDITEDVYFDIIYKKTASLIASCTQLGALSVGATKD 196 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++ LK +G LG+AFQ+ DD+ DY + N +GK G D + K TLP+I + + +E Sbjct: 197 QQEKLKRFGECLGVAFQMKDDLFDYEKQGN-IGKPTGNDIKEKKLTLPLIYVLRNVSDKE 255 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + I + E + + ++E + T + Y QK+ + L P+S S Sbjct: 256 RKWALKIIRKHNKNSEKVNELIQFVKEKGGIDYTRDKMLEYKQKSLEILSNFPESEANTS 315 Query: 310 LMEVVDFCLQR 320 L E+V++ + R Sbjct: 316 LKELVEYTISR 326 >gi|167630030|ref|YP_001680529.1| heptaprenyl diphosphate synthase component ii, putative [Heliobacterium modesticaldum Ice1] gi|167592770|gb|ABZ84518.1| heptaprenyl diphosphate synthase component ii, putative [Heliobacterium modesticaldum Ice1] Length = 320 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 168/310 (54%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ KV + K + + + + +L+ +GGKRLRP L Y + + LA A Sbjct: 12 DLAKVEAELQKYVDTSLPTLTAASSHLLHAGGKRLRPAFVLLAGKFHNYALERLLPLAVA 71 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ATL+HDDVVD+S RRG R WGN+ S+ GD L +++ ++ E Sbjct: 72 LELIHMATLVHDDVVDESKTRRGIPTVRARWGNRISLHTGDHLFARSLLLISELNDPAMT 131 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ ++ + EGE++Q+ + ++ T DYL+ IK KTA+L +A+ ++ ++ S Sbjct: 132 AVLAKISVEMCEGEIQQMEATYDVHQTFRDYLYRIKRKTALLIAASCQLGAMAVKADPSA 191 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +ALK YG +LG+AFQ+ DD+LD + E+GK IG D R G TLP++ A + Sbjct: 192 VRALKMYGHHLGMAFQITDDILDMTADEKELGKPIGSDLRQGIMTLPILEALRESPDLA- 250 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 ++ + + S + + +A +++E A+ ++ A Y KAK+ L LP + +L Sbjct: 251 --LRTLVAKKEKSQDEVYRAIELIKETGAVERSQIIARRYLDKAKEELTRLPAIPTRHTL 308 Query: 311 MEVVDFCLQR 320 + ++ +R Sbjct: 309 AVIAEYIEKR 318 >gi|147677304|ref|YP_001211519.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] gi|146273401|dbj|BAF59150.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] Length = 321 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 165/289 (57%), Gaps = 3/289 (1%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ + +L+ +GGKRLRP L L A Y + + LA A+E IH ATL+HDDVVD S Sbjct: 29 LLTETSTHLLNAGGKRLRPALCLFGAKFYNYNLEKVLPLAVALELIHMATLVHDDVVDAS 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACTLAEGELRQ 147 RRG + WGN S VG +L +++ ++ + K+ LS ++ + EGE++Q Sbjct: 89 MTRRGIPTVKAKWGNSISTHVGTYLFAKSLILLSKYEKTPIIARVLSSISVKMCEGEIQQ 148 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 +S S N+ + ++YLH IK KTA+L +A++++ + G S+ L+ YG N+G+AFQ+ Sbjct: 149 ISSSFNICQSIKEYLHRIKLKTALLIAASIQLGAAACGAPVSIHLPLRRYGHNIGMAFQI 208 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DD+LD E +++GK +G D R G T+PVI A +R++ I + + E + Sbjct: 209 TDDILDMVAEESQLGKPVGSDLRQGIVTIPVIYALTCCQQRKR--LVELIGKVEKTEEEI 266 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 ++A I++ A+ + A Y KAK+ L+ LPD + +L DF Sbjct: 267 REAIKIIKSCGAIEYSFNLARKYLLKAKEELKSLPDIPTRFTLSLAADF 315 >gi|167044663|gb|ABZ09334.1| putative Polyprenyl synthetase [uncultured marine microorganism HF4000_APKG7H23] Length = 328 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 156/288 (54%), Gaps = 3/288 (1%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+ Y + SGGK+LRP LTL +A + +++A A+E +H A+L+HDD VD S +RR Sbjct: 42 VLDYAVMSGGKKLRPALTLLSAQFHPHDPTAPIIMATAVELLHIASLVHDDTVDSSTIRR 101 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+ WG + +V++GD+L + + V +T + S LA GEL + Sbjct: 102 GRATVSSRWGGKVAVMLGDYLFATSATYVCDTGDIRVIRRFSEAIMELARGELSEHFSLH 161 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N D T DY KTA LF A E ++++G S QALK+YG +LG+AFQ++DD+L Sbjct: 162 NWDQTVADYEERTYDKTASLFCTASECGAVLSGASESHCQALKAYGYHLGMAFQIMDDIL 221 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 D++G E+GK +G D G TLP + QR E + + G E+L++ Sbjct: 222 DFQGTEAELGKPVGNDLLQGTITLPALFFAQR-YPDESVLER--LKKGGTDQEDLRQMVE 278 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++R + A+ +T A YG +A ++L L + + SL E+ + R Sbjct: 279 MVRNSPAIDETLAVADRYGHQALEALGQLAPNQARSSLKELASYITSR 326 >gi|126663213|ref|ZP_01734211.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38] gi|126624871|gb|EAZ95561.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38] Length = 326 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 171/307 (55%), Gaps = 17/307 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + Y++ GK++RPM TA M+ YRG A IE I Sbjct: 26 MSSKVALLNRITHYIVNRKGKQMRPMFVFLTAKMVSGGSIDERTYRG------ASVIELI 79 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVDDS RRG + +W N+ +VLVGDFLLS+ + I+ + L+ +S Sbjct: 80 HTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDFLLSKGLLLSIDNNDFDLLKIIS 139 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL-IAGVQNSVRQA 193 + ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A + + +A +V + Sbjct: 140 VAVREMSEGELLQIEKARRLDITEDIYYEIIRQKTATLIAACCSLGACSVAPDDKAVVEK 199 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+I A + +EK++ Sbjct: 200 MRKFGELIGMAFQIKDDLFDYTDDA--IGKPTGIDIKEQKMTLPLIYALNNCSSKEKSWV 257 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 ++I + + +K+ +++ L E + + Q+A + P S +K SL+ + Sbjct: 258 INSIKNHNKDKKRVKEVIQFVKDKNGLTYAENKMIQFQQEALQLITDFPSSPYKDSLILM 317 Query: 314 VDFCLQR 320 V++ ++R Sbjct: 318 VNYVIER 324 >gi|150026116|ref|YP_001296942.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86] gi|149772657|emb|CAL44140.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86] Length = 325 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 101/320 (31%), Positives = 175/320 (54%), Gaps = 16/320 (5%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YR 60 L++ME + + S + ++ + Y++ GK++RPM TA M+ YR Sbjct: 12 LEEMELFEKKFQQSMSSKIALLNRITYYVVNRKGKQMRPMFVFLTAKMISGGTVLERTYR 71 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + Sbjct: 72 G------ALVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLL 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 I+ + L+ +S+ ++EGEL Q+ ++ LD+TE Y +I+ KTA L +A + Sbjct: 126 SIDNGDFDLLKIISVAVREMSEGELLQIEKARRLDITEAIYYEIIRQKTATLIAACCALG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+I Sbjct: 186 AQSVSNDEVQVEKMRKFGELIGMAFQIKDDLFDYTEDA--IGKPTGIDIKEQKMTLPLIH 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 T +EK++ ++I + + +K+ ++ N L E++ + Q+A L+ Sbjct: 244 VLNNCTAKEKSWLINSIKNYNKDKKRVKEVITFVKNNSGLAYAEHKMRQFQQEALSLLQD 303 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P+S++K SL+ +V++ ++R Sbjct: 304 FPNSTYKDSLILMVNYVIER 323 >gi|317152516|ref|YP_004120564.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316942767|gb|ADU61818.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 322 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 108/292 (36%), Positives = 157/292 (53%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ DV K++I SGGKR+RPMLTL A + Y D++ +AC++E +H+ATLLHDD +DD+ Sbjct: 29 LVRDVAKHIIGSGGKRIRPMLTLLFARAMGYDRDDYHAIACSLELLHSATLLHDDYLDDA 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG+ AA LV+G ++L GD LL+ A M + L+ A GE+ ++ Sbjct: 89 ELRRGRSAAHLVFGRTETILAGDALLALANEMGARYGNARLCWLLARGIMETAVGEIEEI 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 SK+ + E Y+++I KTA L A + +AG A YG+NLGIAFQLV Sbjct: 149 RFSKHPTLDREAYMNIIIGKTARLIECACRCGAALAGATPEQEDAAGEYGLNLGIAFQLV 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD LDY +E GK G D R GK TLP+IL + G + + DG+++ E Sbjct: 209 DDALDYASPTSETGKPEGGDLREGKVTLPLILFMEDGDEAASETLLGLMRDGELTEEQCA 268 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +++ T A Y ++AK L P L + D+ L R Sbjct: 269 EILAQVQDAGCPQRTRDEAAHYVERAKACLAGFPPGEPVTVLGQAADYVLTR 320 >gi|308069508|ref|YP_003871113.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase subunit 2) [Paenibacillus polymyxa E681] gi|305858787|gb|ADM70575.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase subunit 2) [Paenibacillus polymyxa E681] Length = 324 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 170/312 (54%), Gaps = 2/312 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KDM + + + I S +I D +L+ +GGKRLRP+ L EY D +A Sbjct: 12 KDMNFIEEELYRSIDSTEPLINDTSLHLLKAGGKRLRPVFVLLGGKFGEYDLDKLKRIAV 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IH+A+L+HDDV+DD+ +RRG+ + W N+ ++ GD++ ++A + + + Sbjct: 72 PLELIHSASLVHDDVIDDAEMRRGQPTVKSKWDNRVAMYTGDYIYARALSIAAGLPNPDI 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 LS ++ GE+ Q+ N+D + +YL I+ KTA+L + + ++ ++ AG + S Sbjct: 132 HRVLSKALVQMSIGEMEQIRDFFNVDQSVRNYLLRIRRKTALLIAVSCQLGAMAAGARES 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L SYG N+G+AFQ+ DD+LD G ++GK G D R G TLPVI A ++ R Sbjct: 192 VNSLLYSYGYNVGMAFQIQDDLLDLCGTEKKIGKPPGSDMRQGNITLPVIYALEQPELRA 251 Query: 250 KNFWK-STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + I DG + +KA +++++ + E A Y KA ++L LPD KK Sbjct: 252 DLLAEIRRIQDGD-GQGDARKAVDMIKKSEGIAKAEILADRYINKALNALDLLPDVKTKK 310 Query: 309 SLMEVVDFCLQR 320 +L ++ F +R Sbjct: 311 TLRDIAHFVTRR 322 >gi|167039330|ref|YP_001662315.1| polyprenyl synthetase [Thermoanaerobacter sp. X514] gi|256752210|ref|ZP_05493075.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|300913970|ref|ZP_07131287.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561] gi|307725346|ref|YP_003905097.1| polyprenyl synthetase [Thermoanaerobacter sp. X513] gi|166853570|gb|ABY91979.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514] gi|256748938|gb|EEU61977.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|300890655|gb|EFK85800.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561] gi|307582407|gb|ADN55806.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513] Length = 322 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 167/300 (55%), Gaps = 3/300 (1%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 KRI + + I +++ +I++ GK LRP + EY + LA AIE +H ATL+ Sbjct: 24 KRIKNSNKSIRNILLDMIYNSGKMLRPAFVILAGKFGEYDRKKILPLAAAIEMLHMATLV 83 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD++D++ +RR K + +G +V +GDFL S++F ++ + + L+ +S V + Sbjct: 84 HDDIIDNALIRRSKPTIQAEYGKDYAVFIGDFLFSESFLLLSDNIAISNLKKVSKVVSKI 143 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q +N+D+T DYL I +KTA LF+ + V + + ++ +AL S G N Sbjct: 144 CKGEIGQFESRRNIDITINDYLRRIAAKTAALFALSFYVGAYESKCDENLAKALGSIGYN 203 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+AFQ++DD+LDY G+ +GK +G D R G TLP+I + K + + Sbjct: 204 IGMAFQIIDDILDYTGQEAVVGKPLGNDIREGVFTLPLIYSLD---KNKDKIMLELLKKE 260 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 S E++K+ +++N + ++ A Y +KA D + L DS K+ L+EV L R Sbjct: 261 SYSEEDIKQIIEFVQQNGGIDRSKMLAQKYTKKAFDKISMLKDSPSKQVLIEVTGKLLYR 320 >gi|78188931|ref|YP_379269.1| polyprenyl synthetase [Chlorobium chlorochromatii CaD3] gi|78171130|gb|ABB28226.1| polyprenyl synthetase [Chlorobium chlorochromatii CaD3] Length = 324 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 162/292 (55%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V +Y++ GK++RP + L +A + ++ A +E +H+ATL+HDDVVD + Sbjct: 31 LVDKVSRYVLKQQGKQIRPAIVLLSANLCGGVNESSYRAAIMVELLHSATLIHDDVVDGA 90 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 +RRG + +W N+ SVL+GD++L++ ++ L +S ++EGE+ Q+ Sbjct: 91 EMRRGLPSINALWKNKISVLMGDYMLARGLLYSLDHNDYGFLHMVSEAVRRMSEGEILQI 150 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 +++LD+TE+DYL VI KTA L S++ + ++ A S ALK+YG LG+AFQ+ Sbjct: 151 QKTRSLDITEKDYLSVISDKTASLISSSCAMGAMSATTDESNIAALKNYGEYLGLAFQIR 210 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LDY G+ GK +G D ++ K TLP+I A + + E+ +S + + Sbjct: 211 DDLLDYTGDSKTTGKQMGIDIKDKKITLPLIYALSQSSATEQRHIRSILKSARKRAIKSP 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +R L A ++ A S+ P+ S K SL+ +VDF + R Sbjct: 271 EVIDFVRTKGGLEYAATVAENFASNAVQSISHFPEGSAKTSLLRLVDFVMMR 322 >gi|87310419|ref|ZP_01092549.1| polyprenyl synthase [Blastopirellula marina DSM 3645] gi|87286918|gb|EAQ78822.1| polyprenyl synthase [Blastopirellula marina DSM 3645] Length = 309 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 114/312 (36%), Positives = 160/312 (51%), Gaps = 8/312 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M V ++ + + S E + +VV Y GGKR+RP L L A D H L I Sbjct: 1 MAAVEEILNREMSSRYESVNEVVSYGCMLGGKRMRPALLLLAAKACGQVTDAHYTLGAVI 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTATL+HDDV+D++ RR W N+TSVL+GDFL S AF + + A Sbjct: 61 EMIHTATLVHDDVLDEADQRRHLATVNSRWNNETSVLLGDFLFSHAFYLATMLPTTCAAR 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + + EGELRQ++ + + TEE+YL +I +KTA L + A E+ + A Sbjct: 121 MIGRSTNIVCEGELRQIASRQAFETTEEEYLAIIDAKTAELCACACELGARYAEASEEQI 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--RGTKRE 249 AL+ +G +LGIAFQ+ DD+LD G E GK++G D KPTLP+I A +G +RE Sbjct: 181 AALEKFGRDLGIAFQIADDLLDVEGNEVETGKSLGTDLEKQKPTLPLIYALHYFQGEQRE 240 Query: 250 KNFWKSTINDGKISVENLKKAF-IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + I +G EN + + AL RA Y Q A +L LP S + Sbjct: 241 QVL---AIVEGP--AENRGPGLRPWLAQCDALGYARRRANEYIQSAIAALSILPHSESRT 295 Query: 309 SLMEVVDFCLQR 320 +L ++ F R Sbjct: 296 TLEQLASFVTAR 307 >gi|116753785|ref|YP_842903.1| farnesyltranstransferase [Methanosaeta thermophila PT] gi|116665236|gb|ABK14263.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Methanosaeta thermophila PT] Length = 327 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 111/331 (33%), Positives = 178/331 (53%), Gaps = 17/331 (5%) Query: 1 MKMLEDLTLK-DMEKVNFLILKRI-----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATA 54 MK LE L+ ++ + LI K I S E + D ++L+ +GGKRLRP L L Sbjct: 1 MKTLEGGDLEAELRRRADLISKAIDELLPVSRPEGLYDAARHLLGAGGKRLRPSLLLIAG 60 Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 + V A AIE +H TL+HDD++D+++LRRGK A ++WG ++L GD L Sbjct: 61 ESVGCDAARLVPAAVAIELVHNFTLIHDDIMDNASLRRGKPAVHVIWGTSGAILAGDTLY 120 Query: 115 SQAFCMV--IETKSQEALEALSLVA--CT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169 S+AF M+ ++ + L A+ ++A CT + EG+ + L + VTE++YL +I+ KT Sbjct: 121 SKAFEMLSMVDAPPERVLAAMDMLARTCTSICEGQWQDLEFERAESVTEKEYLEMIEKKT 180 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 VL+ A+ + + + G V L+ +G G+ FQ+ DD+LD + +GK +G D Sbjct: 181 GVLYGASAWIGATLGGAPPEVAGGLEEFGRLTGMGFQIHDDILDLTVPEDVLGKRLGGDI 240 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289 GK T+ +I A +G K E G+ S E L++A +R ++ RA Sbjct: 241 LEGKKTMIIIDALSKGVKLE------IFGKGQASQEQLREAISALRRCGSIDYARRRAEE 294 Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + K +L L DS KK L+E+ D+ ++R Sbjct: 295 FVGRGKRALDVLDDSPAKKLLLELADYMIRR 325 >gi|327398180|ref|YP_004339049.1| polyprenyl synthetase [Hippea maritima DSM 10411] gi|327180809|gb|AEA32990.1| Polyprenyl synthetase [Hippea maritima DSM 10411] Length = 316 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 170/290 (58%), Gaps = 20/290 (6%) Query: 38 IFSGGKRLRPMLTL--ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 + GKRLRP+L L A+AL ++ D +++ A+E IHTA+LLHDD++DD+ RRGK Sbjct: 38 VIGDGKRLRPLLVLYSASALGIDEPKD-ALVVGSAVELIHTASLLHDDIIDDALYRRGKP 96 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A+ V+G + +V+ GD+L S A+ +V++ A +A+S A L+EGE+ ++ + ++ Sbjct: 97 ASHTVYGIKPAVMGGDYLYSLAYNIVLDYDVDVA-KAISRAAYILSEGEIEEIEQAFKVN 155 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 + +DY VI KTAVL A+ E +++A Q S K YG NLG+AFQ+ DD LDY+ Sbjct: 156 IGFDDYYRVIYKKTAVLIEASCESGAILANKQFS--PVFKEYGKNLGLAFQIKDDCLDYQ 213 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GKISVENLKKAFII 273 + +GK++G D + GK TLPV+ A E K I D K L + Sbjct: 214 ADPEVLGKDVGIDLKEGKITLPVLYAMD-----EDPLLKEKIADFFDKKDESVLADIVLS 268 Query: 274 MRE---NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++E N+AL +A + KAK++L+ L DS++K L + D+ ++R Sbjct: 269 VKEKGLNKALD----KAKEFSVKAKETLKGLKDSTYKGYLEAIADYAIER 314 >gi|89890092|ref|ZP_01201603.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7] gi|89518365|gb|EAS21021.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7] Length = 325 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 164/306 (53%), Gaps = 16/306 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--------EYRGDNHVLLACAIEFI 74 + S + ++ + +++ GK++RPM A M+ YRG A IE I Sbjct: 26 MASRIALLNRITHFIVNRKGKQMRPMFVFLVAKMIGDGEVNDRTYRG------ASVIELI 79 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + I+ + L+ +S Sbjct: 80 HTATLVHDDVVDDSLKRRGFFSVNALWKNKIAVLVGDYLLSKGLLLSIDNGDFDLLQIIS 139 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A + + + + + Sbjct: 140 VAVREMSEGELLQIEKARRLDITEEVYYDIIRKKTATLIAACCSLGACAVSPGSQDVEKM 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + +G +GIAFQ+ DD+ DY E +GK G D + K TLP+I Q +K+++ + Sbjct: 200 REFGEMIGIAFQIKDDLFDYGNE--RIGKPTGIDIKEQKMTLPLIHTLQIASKKDRKWLI 257 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 +++ + +K+ ++ N L Y Y +A L PDS +K+SL +V Sbjct: 258 NSVKKHNRDKKRVKEVIDFVKNNGGLEYAVKAMYDYRDRAMSILNTYPDSEYKRSLELMV 317 Query: 315 DFCLQR 320 ++ + R Sbjct: 318 EYVIDR 323 >gi|189346622|ref|YP_001943151.1| Polyprenyl synthetase [Chlorobium limicola DSM 245] gi|189340769|gb|ACD90172.1| Polyprenyl synthetase [Chlorobium limicola DSM 245] Length = 324 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 93/292 (31%), Positives = 162/292 (55%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V +Y++ GK++RP L L +A + + A +E +H+ATL+HDDVVD + Sbjct: 31 LVDKVTRYVLRQQGKQIRPALVLLSAKICGGVTEVTYRAAIMVELLHSATLIHDDVVDGA 90 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 +RRG + +W N+ SVL+GD+LLS+ ++ K +L +S ++EGE+ Q+ Sbjct: 91 EMRRGLASINALWKNKISVLIGDYLLSKGLLYSLDHKDYASLHTVSDAVRRMSEGEILQI 150 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 +++LD++EEDY+ VI KTA L +++ + + A +++ +K YG LG+AFQ+ Sbjct: 151 QKTRSLDISEEDYISVISDKTASLIASSCAMGAASATDDDTMIAGMKRYGEYLGLAFQIR 210 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LDY G+ + GK +G D ++ K TLP+I A ++ E+ +S + K Sbjct: 211 DDLLDYTGDSKKTGKQMGIDIKDKKITLPLIYALRQAPASEQKMIRSILKSSKKRAVKSD 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + L A + +A S+ P+ K SL+ +VDF ++R Sbjct: 271 EVIDFVTRKGGLEYAAEIAEGFAAQAVASITPFPECGAKTSLLHLVDFVMKR 322 >gi|303248764|ref|ZP_07335016.1| Trans-hexaprenyltranstransferase [Desulfovibrio fructosovorans JJ] gi|302489851|gb|EFL49780.1| Trans-hexaprenyltranstransferase [Desulfovibrio fructosovorans JJ] Length = 322 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 108/325 (33%), Positives = 173/325 (53%), Gaps = 10/325 (3%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M D+ +++ +N + S ++ VV++++ +GGKRLRP+L + A L ++ Sbjct: 1 MSDFADILSREVPAINRHLEDATASLSPLVQPVVRHVLLAGGKRLRPLLAILVARALGHQ 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D+ LAC++EF+H+ATLLHDD+VD + LRRG+ +A +G ++L GD LL+ A Sbjct: 61 EDDVYPLACSLEFLHSATLLHDDIVDGATLRRGRPSAHTRFGATHTILAGDVLLALANRT 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E E LS A GE+ +++ ++ D+ + YL +I KTA L AA Sbjct: 121 VAEYDDPELTRILSEALLQTATGEILEIAHLRDTDLPLDTYLSIITGKTAHLLQAACHCG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV ++ +A K+ G+N GIAFQLVDD LDY GK G D + GK TLP+IL Sbjct: 181 AVLAGVDANLCEAAKTLGVNCGIAFQLVDDALDYTSPAAVSGKPTGGDLKEGKVTLPLIL 240 Query: 241 -----AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 F+ + ++F + ++ I E L+ + T A +Y +KA+ Sbjct: 241 YLAAQPFEARRRLAEDFRQDQLSGEDI--EYLRGNIVAGGHAE---KTREMAAAYLEKAQ 295 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320 +L P S + +V+ L R Sbjct: 296 AALAVFPPSPEADLIGQVLAPMLAR 320 >gi|124008499|ref|ZP_01693192.1| polyprenyl synthetase [Microscilla marina ATCC 23134] gi|123986007|gb|EAY25857.1| polyprenyl synthetase [Microscilla marina ATCC 23134] Length = 324 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 165/302 (54%), Gaps = 14/302 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------LEYRGDNHVLLACAIEFIHTAT 78 SDV ++ ++ Y++ GK++RPM +A + YRG A IE +HTAT Sbjct: 29 SDVFLLDKIMNYIVKRKGKQMRPMFVFLSAGTGGEINEMAYRG------AALIELLHTAT 82 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + I+ + E L+ +S Sbjct: 83 LVHDDVVDDSNYRRGFFSINALWKNKIAVLVGDYLLSRGLLLSIDNEDFEQLKIVSNAVR 142 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 ++EGEL Q++ ++ LD+TEE Y +I+ KTA L ++ V + AG+ + +G Sbjct: 143 EMSEGELLQIAKARRLDITEEVYYDIIRQKTASLIASCCAVGASAAGLNKEQISMFREFG 202 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+ DY E+GK +G D + K TLP+I A + EK + + Sbjct: 203 EKVGMAFQIKDDLFDY--GTAEIGKPLGIDIKEKKMTLPLIYALNHAKRSEKRHIINLVK 260 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + +K+ ++++ + + Y +A + P+S +K SL+++V F + Sbjct: 261 NKSHKSAKVKEVIAFVKDSGGIEYSNEVMRRYSNEAIALMNDFPESDYKTSLIQLVQFTI 320 Query: 319 QR 320 +R Sbjct: 321 ER 322 >gi|88607961|ref|YP_506132.1| polyprenyl synthetase family protein [Neorickettsia sennetsu str. Miyayama] gi|88600130|gb|ABD45598.1| polyprenyl synthetase family protein [Neorickettsia sennetsu str. Miyayama] Length = 321 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 110/270 (40%), Positives = 163/270 (60%), Gaps = 8/270 (2%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDDSALRRGKVA 96 + S GKR+R +L+L + + + N + A A IE IH ATL+HDDVVD++++RRGK Sbjct: 41 MLSSGKRIRALLSLLSFALCKNADTNAEIRAAATIELIHNATLMHDDVVDENSIRRGKPN 100 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 + + GN+ SVL GDFLLS AF +++E K+ + LS A L+EGE+ QL + V Sbjct: 101 IKSIHGNKISVLTGDFLLSVAFEIILECKNLSVVLLLSKTAKQLSEGEMLQLQSIGEI-V 159 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 +E +YL VI KTAVLFSAA E+++++ G Q V L+ G +G+AFQ+ DDVLDY G Sbjct: 160 SESEYLEVIARKTAVLFSAAAEIAAILTGKQEYV-VILREIGFLIGMAFQITDDVLDY-G 217 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRG-TKREKNFWKSTINDGKISVENLKKAFIIMR 275 E E+GK++G DFR K TLP ++A++ +K K FW+ + +++++A M Sbjct: 218 EPQEVGKSVGNDFRECKFTLPCVIAYRDAKSKAAKKFWREVFFTEE---KDIQEARFFMY 274 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 E AL A Y KA+ L + + Sbjct: 275 EVDALAKAMEVARKYLSKAEKKLSIFENGA 304 >gi|326336630|ref|ZP_08202798.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691100|gb|EGD33071.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 327 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 173/307 (56%), Gaps = 17/307 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + Y++ GK++RPM A ++ YRG A IE I Sbjct: 27 MSSRVALLNRITHYIVNRKGKQMRPMFVFLVAKLISNGIINERTYRG------AAVIELI 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + I+ + L+ +S Sbjct: 81 HTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNNDFDLLKIIS 140 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQA 193 + ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A + + +N ++ + Sbjct: 141 VAVREMSEGELLQMEKARRLDITEEVYYEIIRQKTATLIAACCAMGACSVAPENTTLIEK 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 ++ +G +G+AFQ+ DD+ DY E +GK G D + K TLP+I ++++++ Sbjct: 201 MRLFGECVGMAFQIKDDLFDYTEEA--IGKPTGIDIKEQKMTLPLIYVLNTVKEKDRHWL 258 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 ++I + + +K+ ++ + + T+ + +Y +KA L P S +KK+L+++ Sbjct: 259 INSIKNYNTDKKRVKEVIAFVKAHGGIERTQEKMRAYQRKALAILDDFPASPFKKALLQI 318 Query: 314 VDFCLQR 320 VD+ ++R Sbjct: 319 VDYVIER 325 >gi|146299544|ref|YP_001194135.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101] gi|146153962|gb|ABQ04816.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101] Length = 325 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 170/307 (55%), Gaps = 18/307 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + Y++ GK++RPM TA M+ YRG A IE I Sbjct: 26 MTSKVALLNRITYYIVNRKGKQMRPMFVFLTAKMVSGGTVNERTYRG------ASVIELI 79 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + I+ + L +S Sbjct: 80 HTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNGDFDLLRIIS 139 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QA 193 + ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A + + A +++ V+ + Sbjct: 140 VAVREMSEGELLQIEKARRLDITEDVYYEIIRKKTATLIAACCALGAK-AVIEDDVQVEN 198 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 ++ +G +G+AFQ+ DD+ DY E +GK G D + K TLP+I T +EK + Sbjct: 199 MRMFGELIGMAFQIKDDLFDYSEEA--IGKPTGIDIKEQKMTLPLIHVLNTCTPQEKKWL 256 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 ++I + + +K+ ++ N L E + + Q+A L PDS +K +L + Sbjct: 257 INSIKNHNKDKKRVKEVIAFVKNNNGLAYAEEKMVQFQQEALSLLENYPDSEFKAALTLM 316 Query: 314 VDFCLQR 320 V++ ++R Sbjct: 317 VNYVIER 323 >gi|289804959|ref|ZP_06535588.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 235 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 92/234 (39%), Positives = 135/234 (57%), Gaps = 1/234 (0%) Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 +S +RRGK A +GN SVLVGDF+ ++AF M+ S + LE +S +AEGE+ Sbjct: 1 ESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVL 60 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 QL + D+TEE+Y+ VI SKTA LF AA + S ++AG + L+ YG LG AFQ Sbjct: 61 QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQ 120 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 L+DD+LDY + +GKN+G+D GKPTLP++ A + GT + ++ I G Sbjct: 121 LIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLHAMRHGTPEQSAMIRTAIEQGN-GRHL 179 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 L+ M +L T RA KA +L+ LPD+ W+++L+ + +QR Sbjct: 180 LEPVLEAMTTCGSLEWTRQRAEEEADKAISALQILPDTPWREALIGLAHIAVQR 233 >gi|149924019|ref|ZP_01912402.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1] gi|149815102|gb|EDM74655.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1] Length = 366 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 104/300 (34%), Positives = 159/300 (53%), Gaps = 7/300 (2%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD----NHVLLACAIEFIHTATLL 80 S + +IP V +L F+GGKR RPM TL A Y D + + +A A E +HTATLL Sbjct: 68 SRLAIIPKVGGHLTFAGGKRFRPMATLLAAQAAGYTCDEAWNDTLTIAAAGELLHTATLL 127 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D+ RRG+ AARL +GN SVL GD+ ++A V A +++ + Sbjct: 128 HDDVIDEGEFRRGRPAARLPYGNGLSVLTGDYCFARALQSVSRLGKAAATSSMADAVTLM 187 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 AEGE+ QL + +V E Y VI+ KTA L + V+ L V+ AL YG Sbjct: 188 AEGEIAQLYAAGEWEVDLERYTLVIERKTAALIAWCTAVAHL---VEPDAAAALARYGRE 244 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G AFQ+ DD++DY +V GK G+D R GK TLP+ILA +R + + Sbjct: 245 VGFAFQIADDIIDYTLDVETSGKARGQDLREGKVTLPLILACEREPELRARLAELLRAGP 304 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ L + + + + L + ++ + A ++L+ LP S +++L E+ + + R Sbjct: 305 PVAEAELDRLLVAVVDAGGLDAAREQGQAHVEAACEALQALPPSPAREALGELARYIVGR 364 >gi|283852797|ref|ZP_06370060.1| Trans-hexaprenyltranstransferase [Desulfovibrio sp. FW1012B] gi|283571789|gb|EFC19786.1| Trans-hexaprenyltranstransferase [Desulfovibrio sp. FW1012B] Length = 322 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 107/324 (33%), Positives = 167/324 (51%), Gaps = 8/324 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M D+ +++ +N + + ++ VV++++ +GGKRLRP+LT+ A + Sbjct: 1 MSDFADILSREVPAINEYLEDAAATLSPLVQPVVRHVLLAGGKRLRPLLTVLVARAFGHD 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D+ LAC++EF+H+ATLLHDD+VD + LRRG+ +A + +G ++L GD LL+ A + Sbjct: 61 KDDVYPLACSLEFLHSATLLHDDIVDGAPLRRGRESAHVRFGATHTILAGDVLLALANRI 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E E LS A GE+ +++ ++ D+ E YL +I KTA L AA Sbjct: 121 VAEYDVPELTRILSEALLQTATGEILEIAHLRDTDLPLETYLSIITGKTAYLLQAACHCG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + QA S G+N GIAFQLVDD LDY GK G D + GK TLP+IL Sbjct: 181 AILAGADARLCQAAMSLGVNCGIAFQLVDDALDYTSPAAVSGKPTGGDLKEGKVTLPLIL 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD----TEYRAYSYGQKAKD 296 + ++S E+++ +R N T A +Y KA+ Sbjct: 241 YLAEQPFEARRRLAEDFRQDQLSAEDIE----YLRGNIVAAGHAEKTREMAATYLAKAQA 296 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L P S + +V+ L R Sbjct: 297 ALAVFPPSPEADLIGQVLAPMLGR 320 >gi|189500392|ref|YP_001959862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1] gi|189495833|gb|ACE04381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1] Length = 324 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 161/294 (54%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I VV+Y++ GK++RP+L + A + + A E +H+ATL+HDDVVD + Sbjct: 31 LIDKVVRYILKQQGKQIRPLLVMLGAKVCGGVEEKTYRAAIMAELLHSATLIHDDVVDGA 90 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 +RRG + VW N+ SVL+GD++LS+ ++ K L +S ++EGE+ Q+ Sbjct: 91 EMRRGIASINAVWKNKISVLIGDYMLSKGLLFSLDNKDYLFLHMVSTAVRRMSEGEILQI 150 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 +++LD+TEEDYL VI KTA L S + + + ALKSYG LG+AFQ+ Sbjct: 151 QKTRSLDITEEDYLRVISDKTASLLSTSSAMGAASVTDDEVKINALKSYGEYLGLAFQIR 210 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LDY G+ + GK +G D ++ K TLP+I A + E+ KS + + + Sbjct: 211 DDLLDYTGDSKKTGKQLGIDIKDKKITLPLIYALRNSEGSEQKKIKSILKSSRKRSMRSR 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 + ++ L A + KA ++ L D+ ++SL +VDF ++R N Sbjct: 271 EVVDFVKAKGGLDYAAEVAEGFASKALAAIEKLEDNDARRSLNLLVDFVMKRQN 324 >gi|292669963|ref|ZP_06603389.1| heptaprenyl diphosphate synthase component II [Selenomonas noxia ATCC 43541] gi|292648375|gb|EFF66347.1| heptaprenyl diphosphate synthase component II [Selenomonas noxia ATCC 43541] Length = 349 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 101/322 (31%), Positives = 167/322 (51%), Gaps = 12/322 (3%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH- 64 D+ D+E + + + I S+ ++ D+ +L+ SGGKRLRP L L A RG Sbjct: 31 DVIQADLEMLELTLTEAIASETALVTDIGTHLVSSGGKRLRPALFLVAA-----RGGTSF 85 Query: 65 -----VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 + +A A+E +HTA+L+HDDV+D++ RRG A WGNQ ++L GD++ ++AF Sbjct: 86 DPARAMPIAAALELVHTASLVHDDVIDEADTRRGAATANAKWGNQIAILTGDYIFARAFK 145 Query: 120 MVIETKSQEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 ++ E ++ L+ + CTL+EGE+ Q + E Y I+ KTA E Sbjct: 146 LIAEKGYDSSIYVKLAQLVCTLSEGEILQDHTVYQVPKDESAYYERIRKKTADFLEICCE 205 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + ++I G+ + YG LG+AFQ+ DD+LD+R +GK G D G TLPV Sbjct: 206 LGAMIGGMSADDTARMAQYGQALGMAFQITDDLLDFRQTSEHIGKPAGHDLAQGYVTLPV 265 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 I A + + + + K++ E + +A I+R L + +A +Y ++AK+ L Sbjct: 266 IRALSVLDAHGRAELTALVTNPKMTEEEVARALDIVRMTDGLDYAQTQADAYLERAKNVL 325 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 D +++ + DF +R Sbjct: 326 PEKLDERVRETCLMAADFIGRR 347 >gi|193216089|ref|YP_001997288.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110] gi|193089566|gb|ACF14841.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110] Length = 324 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 104/300 (34%), Positives = 171/300 (57%), Gaps = 4/300 (1%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + S+V ++ V Y++ GK++RP L L +A ++ + A +E +HTATL+HD Sbjct: 25 MASEVGLLNKVASYILKQKGKQIRPALVLLSAKLVGGVNEGTYRAAALVELLHTATLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DVVD + +RRG A +W N+ +VL+GD+LL++ + ++ L +S ++E Sbjct: 85 DVVDTADMRRGLPAVNALWKNKVAVLMGDYLLARGLLLALQNGDTLFLNIVSDAVRRMSE 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GEL Q+ +++LD+ EE Y +I KTA L S A E+ + A VRQ+L+ G LG Sbjct: 145 GELLQIEKTRHLDIDEETYFKIISDKTASLISTACELGAASASTDEKVRQSLRDCGEALG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-GTKREKNFWKSTINDGK 261 +AFQ+ DD+LDY+G+ GK IG D + K TLP+I + + G ++ K +D K Sbjct: 205 LAFQIRDDILDYQGDTKNTGKPIGGDIKEKKITLPLIYSLNKVGEEKRKEIISILKSDKK 264 Query: 262 ISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ N F++ EN + + A Y KA ++++ LPD KKS+ +V+F ++R Sbjct: 265 RALFSNDIINFVV--ENGGIEYADKVAKDYANKALEAIQDLPDCESKKSIDLLVEFVIKR 322 >gi|325286900|ref|YP_004262690.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489] gi|324322354|gb|ADY29819.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489] Length = 325 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 103/325 (31%), Positives = 174/325 (53%), Gaps = 16/325 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE----- 58 ++D K+ME + S V ++ + Y++ GK++RPM TA ++ Sbjct: 7 IKDPVNKEMELFEKKFHASMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKLVSGGKVN 66 Query: 59 ---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 YRG A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGDFLLS Sbjct: 67 ERTYRG------ASVIELIHTATLVHDDVVDDSNKRRGFFSVNALWKNKIAVLVGDFLLS 120 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 + + I+ + L+ +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A Sbjct: 121 KGLLLSIDNGDFDLLKIISVAVREMSEGELLQIEKARKLDITEDVYYEIIRQKTATLIAA 180 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + + + + +G +G+AFQ+ DD+ DY E +GK G D + K T Sbjct: 181 CCSLGACSVNPDSDDVETFRKFGELIGMAFQIKDDLFDYGDEA--IGKPTGIDIKEQKMT 238 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 LP+I TK+EK++ +++ + +K+ ++++ L E + S+ ++A Sbjct: 239 LPLIYTLNNCTKKEKSWLINSVKKHNKDKKRVKEVINFVKDSGGLAYAEEKMMSFKKEAL 298 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320 L P+S +K SL +V++ + R Sbjct: 299 ALLSKYPESDYKSSLELMVNYVVDR 323 >gi|258514531|ref|YP_003190753.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM 771] gi|257778236|gb|ACV62130.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM 771] Length = 323 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/285 (35%), Positives = 158/285 (55%), Gaps = 2/285 (0%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 +L+ +GGKRLRP L Y + LA A+E IH A+L+HDDVVD S RRG Sbjct: 39 HLLNAGGKRLRPAFCLLGGKFYNYDIKKLLPLAVALELIHMASLVHDDVVDASMTRRGMP 98 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + WGN+ SV VGD+L +++ ++ K LS + ++EGE++Q+S S N++ Sbjct: 99 TVKAKWGNRISVHVGDYLFAKSLILISSYKEPLITRVLSDTSVKMSEGEIQQISTSFNVN 158 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 +DY + IK KTA+L SA+ ++ ++ G + L YG +G+AFQ+ DD+LD Sbjct: 159 QYLKDYFYRIKRKTALLISASCQLGAVACGAPKEIYLPLNRYGHYIGMAFQITDDILDMV 218 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 N++GK IG D R G TLPVI A ++ ++E+ + I S + + +A I++ Sbjct: 219 ANKNKLGKPIGGDLRQGIITLPVIYALEKSPRKER--LRDLIVKEVKSDKEVYEAIEIIK 276 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ + + A Y KA+ L LPD++ K +L +F R Sbjct: 277 KSGGIKYSFDIADKYIHKARIHLAKLPDNTIKSTLNLAAEFIKVR 321 >gi|302391328|ref|YP_003827148.1| trans-hexaprenyltranstransferase [Acetohalobium arabaticum DSM 5501] gi|302203405|gb|ADL12083.1| Trans-hexaprenyltranstransferase [Acetohalobium arabaticum DSM 5501] Length = 335 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 168/302 (55%), Gaps = 12/302 (3%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 LK++ + F +L RI + L+ +GGKRLRP+L L + + ++ + + + Sbjct: 21 LKEVTETKFSLLYRISN----------RLLNAGGKRLRPLLVLLSGKLNDHSAQDLISIG 70 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 ++E +H ATL+HDDV+D+S RR + WGN+ +VL GD L +QA +++E + E Sbjct: 71 ASVELLHMATLIHDDVIDNSLHRRSENTINQDWGNKVAVLSGDLLYTQALKLLVEHGNDE 130 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + + + EGE +Q + +L+ +DY++ I KTA+L A+ ++ ++++ V Sbjct: 131 IVNYMLDIVGLICEGEAKQAVTNHDLNQDMKDYINKITKKTALLIGASCKLGAMVSQVDA 190 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 A++SYG NLGIAFQ+++D+ D + E+GK G+D R G TLPV+ A K+ Sbjct: 191 KKAAAMESYGKNLGIAFQIINDLNDIVADKEELGKEPGDDLRQGTLTLPVLYALDNSIKK 250 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E F K I S +KKA I++ + A+ + + Y +A D+L DS K Sbjct: 251 E--FLKKVIISRNNSQAEIKKAIGILKNSGAIKHSIEISRDYINQALDTLTLFSDSPAKN 308 Query: 309 SL 310 +L Sbjct: 309 AL 310 >gi|304438325|ref|ZP_07398266.1| heptaprenyl diphosphate synthase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368691|gb|EFM22375.1| heptaprenyl diphosphate synthase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 321 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/322 (31%), Positives = 168/322 (52%), Gaps = 12/322 (3%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--- 62 D+ +D+ + + + I S+ +I DV +L+ SGGKRLRP L +L RG Sbjct: 3 DVIQEDLAALEPALEEAIVSETPLITDVGMHLVSSGGKRLRPAL-----FLLAARGGASF 57 Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 + +A A+E IHTA+L+HDDV+D++ RRG WGNQ ++L GD++ ++AF Sbjct: 58 DRARAMPVAVALELIHTASLVHDDVIDEADTRRGAETTNAKWGNQIAILSGDYIFARAFK 117 Query: 120 MVIETKSQEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +V E ++ L+ + CTL+EGE+ Q + E+ Y I+ KTA E Sbjct: 118 LVAEEGYDSSVYVKLAHLVCTLSEGEILQDHTVYQIPTGEDAYYERIRKKTADFLEICCE 177 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + I G+ + + YG ++G+AFQ+ DD+LD+R ++GK G D G TLPV Sbjct: 178 LGGFIGGMSPADTAQMAEYGRDIGMAFQITDDLLDFRRSSEDIGKPAGHDLAQGYVTLPV 237 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 I A E+ + I + K VE + +A ++R + L + +A +Y +AK +L Sbjct: 238 IRALSVLGAGEREELAALITNPKKPVEEVARALALVRASDGLDYAQEQADAYLVRAKAAL 297 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 D +++ + DF +R Sbjct: 298 PASLDPRIRETCLMAADFIGRR 319 >gi|225009967|ref|ZP_03700439.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-3C] gi|225005446|gb|EEG43396.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-3C] Length = 325 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/311 (33%), Positives = 170/311 (54%), Gaps = 20/311 (6%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAI 71 + + S V ++ + Y++ GK++RPM TA ML YRG A I Sbjct: 23 FQSMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKMLSGGSVQERTYRG------ASVI 76 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTATL+HDDVVD S RRG + +W N+ +VLVGD+LLS+ + I+ + L+ Sbjct: 77 ELIHTATLVHDDVVDGSDKRRGFFSINALWKNKIAVLVGDYLLSKGLLLCIDNDDFDLLK 136 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA--ALEVSSLIAGVQNS 189 +S+ ++EGEL Q+ ++ LD+TEE Y H+I+ KTA L +A AL +S+ G + Sbjct: 137 IISVAVREMSEGELLQIEKARRLDITEEVYYHIIRQKTATLIAACCALGAASVSPGSEEV 196 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + ++ +G +G+AFQ+ DD+ DY +GK G D + K TLP+I A Q+ + Sbjct: 197 --EKMREFGSLIGMAFQIKDDLFDY--GTKSIGKPTGIDIKEQKMTLPLIHALQQADPDQ 252 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 K + +T+ + + + + +++ L + +Y +A + L PDS +K + Sbjct: 253 KRWMINTVKNHHTDRKRVHELIALVKALGGLSYATTQMNAYKDQALELLAGYPDSVYKNA 312 Query: 310 LMEVVDFCLQR 320 L+ +V F ++R Sbjct: 313 LITMVRFVVER 323 >gi|83590100|ref|YP_430109.1| trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC 39073] gi|83573014|gb|ABC19566.1| Trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC 39073] Length = 322 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 86/240 (35%), Positives = 142/240 (59%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+++V +L+++ + ++ ++L+ +GGKRLRP + A + + LA A Sbjct: 13 DLQQVEAELLRQVDAPDPVLSQAARHLVQAGGKRLRPAFAILAARCCGAPLERILPLAVA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ATL+HDDV+D S +RRG+ WG + S+ GD+L +++ +V Sbjct: 73 LEMIHMATLVHDDVIDASPIRRGRPTVWARWGQELSLHTGDYLFARSLILVATYDDPRIP 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ V+ + +GE++Q++ + +LD+T DYL I KTA+L +A+ E+ ++ AG + Sbjct: 133 SVLASVSVKMVQGEIQQMAAAFDLDITLRDYLDRIYRKTALLIAASCELGAIAAGADTAT 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ YG NLG+AFQ+ DDVLD + ++GK IG D R G TLP I A Q K++K Sbjct: 193 IRHLRYYGRNLGLAFQITDDVLDMVADPEQLGKPIGGDLRQGVITLPAIYALQASPKKQK 252 >gi|326390072|ref|ZP_08211634.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325993937|gb|EGD52367.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 322 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 173/310 (55%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++++V ++ KRI + I +++ +I + GK LRP + + EY + LA A Sbjct: 14 ELDEVIKIMEKRIKNSNRSIRNILLDMIRNSGKMLRPAFVILSGKFGEYDRKRILPLAAA 73 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H ATL+HDD++D++ +RR K + +G +V +GDFL S+ F ++ + + E L Sbjct: 74 VEMLHMATLVHDDIIDNALIRRSKPTIQAEYGKNYAVFIGDFLFSECFLLLSDNITIENL 133 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + +S V + +GE+ Q N+D+T DYL I +KTA LF+ + V + + + Sbjct: 134 KKVSKVVSRICKGEIGQFESRYNIDITINDYLKRIAAKTAALFALSFYVGAYESNCGEKL 193 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L S G N+G+AFQ++DDVLDY GE N +GK + D R G TLP+I + ++ K EK Sbjct: 194 AKILGSIGYNIGMAFQIIDDVLDYTGEENVVGKPLCNDIRQGVFTLPLIYSLEK-NKDEK 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + E++K+ ++EN + ++ A Y +KA D + L DS K+ L Sbjct: 253 MI--ALLKKESYCEEDIKRIVEFVQENGGVDRSKMLAEKYTKKAFDKISMLKDSPPKQIL 310 Query: 311 MEVVDFCLQR 320 +EV L R Sbjct: 311 IEVTSKLLYR 320 >gi|163753001|ref|ZP_02160125.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1] gi|161326733|gb|EDP98058.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1] Length = 325 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 168/306 (54%), Gaps = 16/306 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + Y++ GK++RPM + M+ YRG A IE I Sbjct: 26 MTSKVALLNRITHYIVNRKGKQMRPMFVFLVSKMVSDGLVNDRTYRG------ASVIELI 79 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + I+ + L+ +S Sbjct: 80 HTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNGDFDLLKIIS 139 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A + + + + L Sbjct: 140 VAVREMSEGELLQIEKARKLDITEDVYYEIIRQKTATLIAACCAMGAKSVNASDEEVENL 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + +G +G+AFQ+ DD+ DY G+ ++GK G D + K TLP+I A TK+EK + Sbjct: 200 RLFGEYIGMAFQIKDDLFDY-GD-TQIGKPTGIDIKEQKMTLPLIYALNHCTKQEKKWVI 257 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 ++I + + +K+ +++ L + SY +KA L P S++K SL +V Sbjct: 258 NSIKNHNKDKKRVKEVIAFVKKTGGLEYAITQMKSYQEKALKLLEIYPQSTYKDSLELMV 317 Query: 315 DFCLQR 320 ++ + R Sbjct: 318 NYVIDR 323 >gi|260063737|ref|YP_003196817.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501] gi|88783182|gb|EAR14355.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501] Length = 325 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 100/319 (31%), Positives = 173/319 (54%), Gaps = 16/319 (5%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRG 61 K+ME + + S V ++ + Y++ GK++RPM TA +L YRG Sbjct: 13 KEMELFEKKFHQSMSSKVPLLNRITYYIVNRKGKQMRPMFVFLTAKLLNEGQVNERTYRG 72 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 A IE IHTA+L+HDDVVD+S RRG + +W N+ +VLVGDFLL++ + Sbjct: 73 ------ASVIELIHTASLVHDDVVDESFKRRGFFSINALWKNKIAVLVGDFLLARGMLLS 126 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++ + L +S ++EGEL QL ++ LD+TEE Y +I+ KTA L +A + + Sbjct: 127 VDNGDFDLLRIISAAMREISEGELLQLEKARRLDITEEVYYEIIRQKTATLIAACCSLGA 186 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + + +G G+AFQ+ DD+ DY GE N +GK G D + K TLP+I A Sbjct: 187 ASVRPDSEYVEMFRKFGERCGMAFQIKDDLFDY-GE-NRIGKPTGIDIKEQKMTLPLIYA 244 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++R++ + +++ + + +++ ++ + L E R + Q+A + L+ Sbjct: 245 LNSASERDRKWLINSVKNYNTDKKRVREVIDFVKSSGGLEYAEGRMQEFKQEALEMLKPF 304 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P SS++++L +V++ + R Sbjct: 305 PQSSYREALELMVNYVVDR 323 >gi|20808838|ref|NP_624009.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter tengcongensis MB4] gi|254478179|ref|ZP_05091561.1| polyprenyl synthetase superfamily protein [Carboxydibrachium pacificum DSM 12653] gi|20517490|gb|AAM25613.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter tengcongensis MB4] gi|214035908|gb|EEB76600.1| polyprenyl synthetase superfamily protein [Carboxydibrachium pacificum DSM 12653] Length = 322 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 168/300 (56%), Gaps = 3/300 (1%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 KR+ S ++I D++ ++ + GK LRP + +A Y + LA AIE +H ATL+ Sbjct: 24 KRVKSSNKLISDILLDMVNNSGKMLRPAFVIISAKFGNYDRKKILPLAAAIEMLHMATLV 83 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD++D++ +RR K + +G +V +GDFL SQ+F ++ + + L+ +S V + Sbjct: 84 HDDIIDNALIRRSKPTIQAEYGKDYAVFIGDFLFSQSFLLLSDNINVANLKKVSKVVSRI 143 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q ++++T DYL I +KTA LF+ + V + + + + L S G N Sbjct: 144 CKGEIDQFESRYDINITINDYLKRIAAKTAALFALSFYVGAYESNCGEELAKILGSIGYN 203 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +GIAFQ++DD+LDY GE + +GK + D R G TLP+I + +R + EK S I Sbjct: 204 IGIAFQIIDDILDYTGEESVVGKPLCNDIRQGVFTLPLIYSLER-NRDEKII--SLIKKR 260 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +++K+ +++N + ++ A Y +KA D + L DS K+ L++V L R Sbjct: 261 NYCEDDIKRIVAFVQQNGGITQSKMLAEKYTKKAFDKIAMLKDSPPKQILIDVTTKLLYR 320 >gi|51245595|ref|YP_065479.1| octaprenyl-diphosphate synthase [Desulfotalea psychrophila LSv54] gi|50876632|emb|CAG36472.1| related to octaprenyl-diphosphate synthase [Desulfotalea psychrophila LSv54] Length = 336 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 128/220 (58%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ D+++Y + SGGKR+RP+L L A + G LA E++H ATL HDD++D S Sbjct: 36 LLCDILEYGLLSGGKRIRPLLVLMAARLCGNNGLETYRLATGFEYLHAATLFHDDIIDHS 95 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG+ + +G + ++L GDFL ++A V E E L + +GE QL Sbjct: 96 DLRRGQESIAKKFGMEAAILAGDFLHTRAMIFVGEMVGAEGLRRFGKATSAMVDGEFLQL 155 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 ++ +++E DY + KT VL +AA E+ +L G + AL+SYG LG AFQ+V Sbjct: 156 RNAQEYNISELDYYRAVMGKTGVLIAAACELGALYGGGSEAEIAALRSYGEKLGSAFQIV 215 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 DD+LDY+G+ GK +G D GK TLP+ILA + KR Sbjct: 216 DDLLDYQGDTALTGKAVGNDLAEGKMTLPLILALSQAKKR 255 >gi|254796624|ref|YP_003081460.1| polyprenyl synthetase family protein [Neorickettsia risticii str. Illinois] gi|254589861|gb|ACT69223.1| polyprenyl synthetase family protein [Neorickettsia risticii str. Illinois] Length = 302 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 111/268 (41%), Positives = 163/268 (60%), Gaps = 10/268 (3%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDS 88 I D K L S GKR+R +L+L + + E D + A IE IH ATL+HDDVVD++ Sbjct: 37 IEDAKKML--SSGKRIRALLSLLSFALCENSDTDVEIRAAATIELIHNATLMHDDVVDEN 94 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 ++RRGK + + GN+ SVL GDFLLS AF +++E ++ + LS A L+EGE+ QL Sbjct: 95 SIRRGKPNIKSIHGNRISVLTGDFLLSVAFEIILECENLSVVLLLSKTAKQLSEGEMLQL 154 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + V+E +YL VI KTAVLFSAA E+++++ G + V L+ G +G+AFQ++ Sbjct: 155 QSIGEI-VSESEYLEVIARKTAVLFSAAAEIAAILTGKKEYV-VILREIGFLIGMAFQII 212 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-TKREKNFWKSTINDGKISVENL 267 DDVLDY GE E+GK++G DFR K TLP ++A++ +K K FW+ + +++ Sbjct: 213 DDVLDY-GESQEVGKSVGNDFRECKFTLPCVIAYRDARSKAAKEFWREVFFTEE---KDI 268 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAK 295 ++A M E AL A Y KA+ Sbjct: 269 QEARFFMYEVDALAKAMEVARDYLSKAE 296 >gi|149173800|ref|ZP_01852429.1| polyprenyl synthase [Planctomyces maris DSM 8797] gi|148847330|gb|EDL61664.1| polyprenyl synthase [Planctomyces maris DSM 8797] Length = 330 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 105/321 (32%), Positives = 176/321 (54%), Gaps = 4/321 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + +E+L ++E+ + L + S + DV++++ GKRLRP+L L +A Sbjct: 11 LARVEELIGGELEQAERVFLSEVSSKHPYVHDVLQHITRFQGKRLRPILLLLSAAATGGI 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 ++H +LA +E IH ATL+HDDV+DD+ +RR W N+TSVLVGDFL + AF + Sbjct: 71 NESHYVLASVVEMIHLATLVHDDVLDDALIRRHVATVNSRWNNETSVLVGDFLFTHAFHL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 A + + EGEL Q+ N +++EE YL +I KTA L + + ++ Sbjct: 131 TASLGDARACRLIGRATNLVCEGELAQIYERGNHELSEEQYLEIINGKTAELCAISTQLG 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L A S+ +A+ YG LG+AFQ+ DD+LD G+ +MGK++G D + K TLP+I Sbjct: 191 ALYASADESIVEAMDEYGRALGVAFQITDDLLDLLGDEEQMGKSLGSDLQKEKLTLPLIR 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD-TEYRAYSYGQKAKDSLR 299 + + ++ + ++ N K+ I +N +D RA + ++A++SL+ Sbjct: 251 LLDQCSPEDRATIQEILSQPD---PNTKQRLIQYIKNSDAIDYAGNRAREFAKQARNSLQ 307 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 P S ++ L E+ +F +QR Sbjct: 308 NCPASPARQILEELTEFAIQR 328 >gi|51891328|ref|YP_074019.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863] gi|51855017|dbj|BAD39175.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863] Length = 331 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 173/313 (55%), Gaps = 8/313 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ +V I + + M+ +V +L+ SGGKR+RP L + + + +A A Sbjct: 22 DLRQVETAIEAALSTQETMLEEVSTHLLRSGGKRIRPALVILASRFPGVELKQVIDVAVA 81 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ATL+HDDVVD++ LRRG+ +W NQ SVL GD+L ++AF ++ +T + + Sbjct: 82 VELIHMATLVHDDVVDNADLRRGRPTVNALWNNQVSVLTGDYLFAKAFTLLADTGNNRVV 141 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +S V +++GEL Q++ +++ TEEDY I KT L + A + +++AGV Sbjct: 142 RLMSEVVREMSQGELAQMASYFDVEQTEEDYYRRIARKTGYLIAEACRLGAVMAGVGEEQ 201 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR-- 248 QA+ YGM +G++FQ+ DD+LD+ G+ +GK + D + G TLPVI +R Sbjct: 202 VQAVYDYGMGVGLSFQIADDLLDFFGDEETVGKPVCGDLKIGILTLPVIHGLAHAPRRAE 261 Query: 249 -EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + +I+D +V +K+ I+ E+ + +A + +KA +L +P + + Sbjct: 262 LRELILSRSIDD--TAVARVKE---ILTESGSFDYARGKAREHIEKAVRALDHVPTLATR 316 Query: 308 KSLMEVVDFCLQR 320 +L + +F + R Sbjct: 317 PALKTLAEFVINR 329 >gi|300776952|ref|ZP_07086810.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC 35910] gi|300502462|gb|EFK33602.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC 35910] Length = 325 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 165/302 (54%), Gaps = 13/302 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTAT 78 S V ++ V ++++ + GK++RPM A ++ YRG A IE IHTAT Sbjct: 29 SKVALLDKVTRFIVTTKGKQMRPMFVFLCAKLVGEVTEKTYRG------ASMIELIHTAT 82 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L+HDDVVD+S RR + +W N+ +VLVGD+LLS++ + + K + L +S Sbjct: 83 LVHDDVVDESFKRRNFFSINALWKNKIAVLVGDYLLSKSVLLSTDHKDYDLLGVISRTIR 142 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 ++EGEL QL ++ LD+TE+ Y +I+ KTA L +A E+ L ++ + + +G Sbjct: 143 EMSEGELLQLEKARKLDITEDVYYEIIRQKTATLIAACCEIGVLSNNADEALAKKMMDFG 202 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 G+AFQ+ DD+ DY N +GK +G D + K TLP+I ++++ ++ TI Sbjct: 203 TFTGMAFQIKDDLFDYLSS-NVIGKPVGIDIKEQKMTLPLIHTLTTANEKDRKYYFDTIK 261 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + + +K+ ++ + L + QKAKD L PDS +KSL ++D+ + Sbjct: 262 RYNNNPKRVKELIEFVKSSGGLEYAITVMKDFQQKAKDILNEFPDSEARKSLHIMLDYVI 321 Query: 319 QR 320 +R Sbjct: 322 ER 323 >gi|156120113|gb|ABG57080.2| Hep2 [Heliophilum fasciatum] Length = 320 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 95/285 (33%), Positives = 159/285 (55%), Gaps = 3/285 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 +L+++GGKRLRP L Y + + LA +E IH ATL+HDDV+D+S RRG Sbjct: 37 HLLYAGGKRLRPAFVLLAGRFHNYSFERLLPLAVTMEMIHMATLVHDDVIDESETRRGTP 96 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 R WGN+ S+ GD L +++ ++ E + L+ + + EGE++Q++ + +++ Sbjct: 97 TVRARWGNRVSMHAGDHLFARSLLLIAEMNNPIIARVLAETSVEMCEGEIQQMATAFDVE 156 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 DYL+ IK KTA+L SA+ ++ ++ + +ALK YG +LG+AFQ+ DD+LD Sbjct: 157 QNFRDYLYRIKRKTALLLSASCQLGAVAVDAPPYMIRALKWYGYHLGMAFQVTDDILDLE 216 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 + ++GK IG D R G TLPV+ A + + K+ + + S +++A I++ Sbjct: 217 ADEAKLGKPIGSDLRQGIMTLPVLEAI---AQVQDPKLKTLLAKQEKSEREVQEAIRIIK 273 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + A+ + A Y KAK L LP+ + S+ + DF +R Sbjct: 274 QTDAIARSHRVAQLYLAKAKAELSRLPNIPARDSMAMIADFIGRR 318 >gi|169831509|ref|YP_001717491.1| trans-hexaprenyltranstransferase [Candidatus Desulforudis audaxviator MP104C] gi|169638353|gb|ACA59859.1| Trans-hexaprenyltranstransferase [Candidatus Desulforudis audaxviator MP104C] Length = 318 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 108/317 (34%), Positives = 169/317 (53%), Gaps = 6/317 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L D+ D++ V + + S+ +++ + +L +GGKRLRP L L +A Y Sbjct: 1 MLPLLDVVRDDLDIVERELYAVLKSNNQLLTESSSHLFRAGGKRLRPALALLSAKFYNYD 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA A+E +H ATL+HDDVVD + LRRG + WGN+ SV GD+LL++A + Sbjct: 61 LQKVLPLAMALELVHLATLVHDDVVDGAELRRGIPTVKARWGNKVSVHTGDYLLAKAMIL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V +S + L+ + EGE+ Q + D+ DYL IK KTA+L AA ++ Sbjct: 121 VSVYRSPVIIGVLAHSCVKMCEGEIIQFAGLNQCDL--RDYLRRIKYKTALLIQAACQLG 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G + + L +G LG+AFQ+ DD+LD + +GK G D R G TLPV+L Sbjct: 179 AVATGAPRELYKPLGRFGHCLGMAFQITDDILDMVADQKRLGKPTGGDLRQGIITLPVML 238 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLR 299 A R E + +N + + E++++A + +E VD ++ A Y KA L+ Sbjct: 239 ALARSP--EDGRLAALVNKTEKTAEDVREAIRLTKEYGG-VDLAFQVADQYLDKAHGYLK 295 Query: 300 CLPDSSWKKSLMEVVDF 316 LPD +++ V DF Sbjct: 296 MLPDIPARENFARVTDF 312 >gi|86607946|ref|YP_476708.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556488|gb|ABD01445.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 320 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 102/315 (32%), Positives = 171/315 (54%), Gaps = 8/315 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLL 67 D+E++ + + + + ++ ++L +GGK +RP + L A G+ H L Sbjct: 11 DLERLRQNLTRLVSAKHPILAMAAEHLFSAGGKGIRPAIVLLIARATTPDGEITPRHWRL 70 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A E IHTA+L+HDDV+D + +RRG ++ N+ +VL GD+L QA + + Sbjct: 71 AEITEMIHTASLVHDDVIDAADVRRGIDTVNTLFDNRIAVLAGDYLFGQAAWYLANLDNL 130 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 E ++ LS V L EGE+RQ + DV+ EDYL KTA L S + + + L++GV Sbjct: 131 EVVKLLSKVIMDLPEGEVRQSLTRFDPDVSMEDYLAKSFYKTASLMSGSSKAAGLLSGVS 190 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 V L +G +LGIAFQ+VDD+LD+ +GK +G D G T PV+ A + + Sbjct: 191 EEVADRLFDFGRDLGIAFQIVDDLLDFTASAETLGKPVGSDLIQGNLTAPVLFALEEFPQ 250 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + N ++LK+A + ++ + + A Y Q+A ++L LPDS+ + Sbjct: 251 MRELILRELSNP-----QDLKQALEWVYQSEGIPRSRQLARDYAQRAAEALYSLPDSAAR 305 Query: 308 KSLMEVVDFCLQRLN 322 ++L ++VD+ L+RL+ Sbjct: 306 RALFQMVDYVLERLH 320 >gi|307264970|ref|ZP_07546531.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919955|gb|EFN50168.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter wiegelii Rt8.B1] Length = 322 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 173/310 (55%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++++V ++ KR+ + I +++ +I + GK LRP + + EY + LA A Sbjct: 14 ELDEVIKIMEKRVKNSNRSIRNILLDMIRNSGKMLRPAFVILSGKFGEYDRRRILPLAAA 73 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H ATL+HDD++D++ +RR K + +G +V +GDFL S+ F ++ + + E L Sbjct: 74 VEMLHMATLVHDDIIDNALIRRSKPTIQAEYGKNYAVFIGDFLFSECFLLLSDNITIENL 133 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + +S V + +GE+ Q N+D+T DYL I +KTA LF+ + V + + + Sbjct: 134 KKVSKVVSRICKGEIGQFESRYNIDITINDYLKRIAAKTAALFALSFYVGAYESNCGEKL 193 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L S G N+G+AFQ++DDVLDY GE N +GK + D R G TLP+I + ++ K EK Sbjct: 194 AKILGSIGYNIGMAFQIIDDVLDYTGEENVVGKPLCNDIRQGVFTLPLIYSLEK-NKDEK 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + E++K+ ++EN + ++ A Y +KA D + L DS K+ L Sbjct: 253 MI--ALLKKESYCEEDIKRIVEFVQENGGVDRSKMLAEKYTKKAFDKISMLKDSPPKQIL 310 Query: 311 MEVVDFCLQR 320 +EV L R Sbjct: 311 IEVTSKLLYR 320 >gi|332886110|gb|EGK06354.1| hypothetical protein HMPREF9456_00228 [Dysgonomonas mossii DSM 22836] Length = 323 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 5/299 (1%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C++V I +++ +++ S GKR+RP+L L A + A +E +HTA+L+HDD Sbjct: 28 CNNVR-IQEIIDHIMKSDGKRIRPILLLLAAKACGEINNITYNAAITVELLHTASLIHDD 86 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 VVD+S +RRGK + ++ N+ +VL GD+ LS A + T + E + +S + LAEG Sbjct: 87 VVDESKIRRGKASLNAIYDNKMAVLAGDYFLSTALIKSVLTGNIEIISNISDLGRDLAEG 146 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 EL QLSL K L + E++Y VIK KTA L S + + ++ + G G+ Sbjct: 147 ELNQLSLVKELIIDEDEYFQVIKKKTASLMSVCMRIGAISVNASEEEIEKFTRLGELFGL 206 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 FQL DD+ DY + +GK G D R GK TLP++ A + ++ EK S + + Sbjct: 207 CFQLRDDIFDYF--TDAIGKPTGNDIREGKITLPLLYAIKNASEEEKKEILSIVYSYNYT 264 Query: 264 VENLKKAFIIMRENRALVDTEYRAY-SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 EN++ +E+ +D YR + ++A+ + +PDS +++L VD+ ++R+ Sbjct: 265 DENIQHLIHYAKEHGG-IDYAYRKIEEFKEQAEKIIETIPDSDVREALEATVDYIIKRV 322 >gi|297545452|ref|YP_003677754.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843227|gb|ADH61743.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 322 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 171/302 (56%), Gaps = 7/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 KRI + + I +++ +I++ GK LRP + EY + + LA AIE +H ATL+ Sbjct: 24 KRIKNSNKSIRNILLDMIYNSGKMLRPAFVILAGKFGEYDREKILPLAAAIEMLHMATLV 83 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD++D++ +RR K + +G +V +GDFL S++F ++ + + L+ +S V + Sbjct: 84 HDDIIDNALIRRSKPTIQAKYGKDYAVFIGDFLFSESFLLLSDNITVSNLKKVSKVVSKI 143 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q N+ +T DYL I +KTA LF+ + V + + S+ +AL S G N Sbjct: 144 CKGEIGQFESRHNIYITINDYLRRIAAKTAALFALSFYVGAYESKCDESLAKALGSIGYN 203 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE--KNFWKSTIN 258 +G+AFQ++DD+LDY G+ +GK++G D + G TLP+I + + ++ + K + + Sbjct: 204 IGMAFQIIDDILDYTGQEAVVGKSLGNDIKEGVFTLPLIYSLDKNKDKKILELLKKESYS 263 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 D +++++ +++N + ++ A Y +KA D + L DS K+ L+EV L Sbjct: 264 D-----DDIQQIIEFVQQNGGIDKSKMLAQKYTEKAFDKISMLKDSPPKQVLIEVTGKLL 318 Query: 319 QR 320 R Sbjct: 319 YR 320 >gi|242278239|ref|YP_002990368.1| dimethylallyltranstransferase [Desulfovibrio salexigens DSM 2638] gi|242121133|gb|ACS78829.1| Dimethylallyltranstransferase [Desulfovibrio salexigens DSM 2638] Length = 322 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 159/292 (54%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ DV ++++ + GKR+RP+LT+ +A L Y D+ LA ++E +H ATLLHDD++DD+ Sbjct: 29 LVKDVARHVLLAPGKRIRPVLTILSARGLGYGKDDIYPLAGSLELLHAATLLHDDILDDA 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG A+ LV+G ++L GD LL+ A + + L+ EGE+ ++ Sbjct: 89 DLRRGVEASHLVFGTTETILAGDVLLALANKIGADYGKPRISSVLASGIMATVEGEILEI 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + + + Y+ +I KTA L + + +++A ++ A+ ++G+N+GIAFQLV Sbjct: 149 AHISEPLMNRDTYMDIIIGKTARLIETSCRLGAILASDDRAMEDAVGNFGLNMGIAFQLV 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD LDY ++ GK G D + GK TLP+IL + ++E + I +S E Sbjct: 209 DDALDYESPSDDTGKPEGGDLKEGKITLPLILYLEMLQEKEAELLLAEIKSQTLSDEKRV 268 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +R++ T A Y +KAK L LP+ K+ L + DF L R Sbjct: 269 HVLAEIRKHGLGARTRTYAAEYVEKAKSCLDPLPEGEEKQVLKQAADFVLTR 320 >gi|86156806|ref|YP_463591.1| farnesyltranstransferase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773317|gb|ABC80154.1| Farnesyltranstransferase [Anaeromyxobacter dehalogenans 2CP-C] Length = 349 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 113/298 (37%), Positives = 159/298 (53%), Gaps = 13/298 (4%) Query: 20 LKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLACAIEFIHT 76 L R D E + ++L+ +GGKR+RPM+TL A E RG V A A E H+ Sbjct: 46 LTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRG--AVPYAVAAELTHS 103 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSL 135 ATLLHDDV+DD +RRG+ A+R++WGN SVL GD+LL++A +V E AL L Sbjct: 104 ATLLHDDVIDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEPARSAALPPLLA 163 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L EGE+ QLSL TE+ Y+ V+ KTA LF A + AG + AL Sbjct: 164 TMRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWAAAAGAWAAGEVGEIPAALV 223 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK- 254 +G +G+AFQLVDD LDY + +GK +G D GK TLP+I R + E + Sbjct: 224 RFGEGIGVAFQLVDDALDYAADPGLLGKRLGTDLIEGKATLPLI----RACEAEPSLRAR 279 Query: 255 -STINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSL 310 + DG VE + + I + + VD A + + A ++L +PD +++L Sbjct: 280 LGGVVDGTADVEAVAREVIEVVKRVGGVDAARALAREHTRSALEALEQVPDGVHRRAL 337 >gi|197120826|ref|YP_002132777.1| polyprenyl synthetase [Anaeromyxobacter sp. K] gi|196170675|gb|ACG71648.1| Polyprenyl synthetase [Anaeromyxobacter sp. K] Length = 349 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 157/296 (53%), Gaps = 9/296 (3%) Query: 20 LKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLACAIEFIHT 76 L R D E + ++L+ +GGKR+RPM+TL A E RG V A A E H+ Sbjct: 46 LTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRG--AVPYAVAAELTHS 103 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSL 135 ATLLHDDV+DD +RRG+ A+R++WGN SVL GD+LL++A +V E AL L Sbjct: 104 ATLLHDDVIDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEPARSAALPPLLA 163 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L EGE+ QLSL TE+ Y+ V+ KTA LF A + AG + AL Sbjct: 164 TMRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWAAAAGAWAAGEVGEIPAALV 223 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 +G +G+AFQLVDD LDY + +GK +G D GK TLP+I A + + Sbjct: 224 RFGEGIGVAFQLVDDALDYAADPRLLGKRLGTDLIEGKATLPLIRACEAEPALRERL--G 281 Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSL 310 + DG VE + I + + VD A + + A ++L +PD +++L Sbjct: 282 GVVDGTADVETVAGEVIAVVKRVGGVDAARALAREHTRTALEALEQVPDGVHRRAL 337 >gi|86131693|ref|ZP_01050290.1| polyprenyl synthetase [Dokdonia donghaensis MED134] gi|85817515|gb|EAQ38689.1| polyprenyl synthetase [Dokdonia donghaensis MED134] Length = 325 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 165/304 (54%), Gaps = 16/304 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFIHT 76 S V ++ + Y++ GK++RPM TA M+ YRG A IE IHT Sbjct: 28 SKVALLNRITHYIVNRKGKQMRPMFVFLTAKMMNSGEVNDRTYRG------ASVIELIHT 81 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+L+HDDVVDDS +RR + +W N+ +VLVGDFL S+ + I+ + L+ +S+ Sbjct: 82 ASLVHDDVVDDSNMRRSFFSLNALWKNKIAVLVGDFLFSKGLLLSIDNGDTDLLQIISVA 141 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A + + + + + Sbjct: 142 VREISEGELLQIEKARKLDITEELYYEIIRQKTATLIAACCAMGAQAVHAKGKEVKRMHK 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 +G +G+AFQ+ DD+ DY E ++GK G D + K TLP+I +K+EK++ ++ Sbjct: 202 FGELIGMAFQIKDDLFDYGSE--KIGKPTGIDIKEQKMTLPLIYVLNTVSKKEKDWLINS 259 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 I + + +K+ +++N L + + Q+A + L P S ++ SL +V++ Sbjct: 260 IKNKNTDKKRVKEVIAFVKDNGGLDYAILKMKALQQEALEILMTYPQSVYRDSLELMVNY 319 Query: 317 CLQR 320 + R Sbjct: 320 VIDR 323 >gi|91216014|ref|ZP_01252983.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755] gi|91185991|gb|EAS72365.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755] Length = 325 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 169/306 (55%), Gaps = 16/306 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + +++ GK++RPM A M+ YRG A IE I Sbjct: 26 MSSRVALLNKITHFIVNRKGKQMRPMFVFLVAKMVSKGEVNDRTYRG------ASVIELI 79 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDD+VDDS RRG + +W N+ +VLVGDFLLS+ + I+ + L+ +S Sbjct: 80 HTATLVHDDIVDDSNQRRGFFSINALWKNKIAVLVGDFLLSKGLLLSIDNDDFDLLKIIS 139 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A + + + + + Sbjct: 140 VAVREMSEGELLQIEKARRLDITEDIYYEIIRQKTATLIAACCSLGAAAVRPGSKDVEDM 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + +G +G+AFQ+ DD+ DY + ++GK G D + K TLP+I A + +K++KN+ Sbjct: 200 RKFGELIGMAFQIKDDLFDYGDQ--KIGKPTGIDIKEQKMTLPLIYAINQASKKDKNWII 257 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 +++ + + + + ++ L + + + +A + L+ PDS++K SL ++ Sbjct: 258 NSVKNHNRDKKRVNEVIDYVKSVGGLSYAQIKMKEFQSEASEILQRYPDSTYKASLQLMI 317 Query: 315 DFCLQR 320 D+ + R Sbjct: 318 DYVIDR 323 >gi|323699172|ref|ZP_08111084.1| Polyprenyl synthetase [Desulfovibrio sp. ND132] gi|323459104|gb|EGB14969.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132] Length = 322 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 152/292 (52%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ DV K+++ SGGKR+RP+ TL A L Y D+++ +ACA+E +H+ATLLHDD +DD+ Sbjct: 29 LVRDVAKHILGSGGKRIRPLFTLLFARALGYAKDDYLAIACALELLHSATLLHDDYLDDA 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG+ A+ LV+G ++L GD LL+ A M + L+ A GE+ ++ Sbjct: 89 ELRRGRAASHLVFGRTETILAGDALLALANEMGARYGNPRLSWLLAKGIMETATGEIEEI 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S+ + E Y+ +I KTA L A + +AG A +G+N+GIAFQLV Sbjct: 149 EFSRAPSLNRETYMRIIVGKTARLIECACRCGAALAGATPEQEDAAGEFGLNVGIAFQLV 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD LDY +E GK G D + GK TLP+IL + G + + DG +S + Sbjct: 209 DDALDYASPTSETGKPEGGDLKEGKVTLPLILLMEEGDEAGAEVLLEALRDGSLSEAQSR 268 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +RE T A Y +KAK L L + DF L R Sbjct: 269 DVLEQVREGGYSEKTREEAARYIEKAKACLDGYEPGGELTVLKQAADFVLTR 320 >gi|15922378|ref|NP_378047.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus tokodaii str. 7] gi|15623167|dbj|BAB67156.1| 329aa long hypothetical geranylgeranyl pyrophosphate synthetase [Sulfolobus tokodaii str. 7] Length = 329 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 108/329 (32%), Positives = 174/329 (52%), Gaps = 16/329 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ED + +E VN I K + D++ + + YL +GGKRLRP++ +++A +L + Sbjct: 3 FEDYFNRIVENVNINIEKYLKGDIQELYEASFYLFKAGGKRLRPLILVSSADLLGGDLNR 62 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 L ++E +HT TL+HDD++D+ RRG + WG ++L GD L ++AF ++ E Sbjct: 63 AYLAGASVEVLHTFTLIHDDIMDEDTTRRGMPTVHVKWGIPMAILAGDLLHAKAFEILNE 122 Query: 124 T-------KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 K A E + ++EG+ + + V+EE+YL +IK KTA+LFS++ Sbjct: 123 AFRGMSSNKITRAFEIFTKAIIIISEGQALDMQFEDKVTVSEEEYLDMIKRKTAMLFSSS 182 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + LIA QAL YG+NLGI+FQ+VDD+L + E+GK + D R GK TL Sbjct: 183 AALGGLIATDNEKEIQALADYGLNLGISFQIVDDILGLIADEKELGKPVYSDIREGKKTL 242 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 VI + T EK + + S + L A I+R+ +L +A Y +KA + Sbjct: 243 LVIKTMKEATDEEKKILLKALGNKNASKDELITAAEIIRK-YSLEYAYNKAEEYARKAIE 301 Query: 297 SLRCLPDSSWK-----KSLMEVVDFCLQR 320 +L + WK K+L + +F ++R Sbjct: 302 ALESI---DWKNDEAGKALKYLAEFTVKR 327 >gi|48475134|gb|AAT44203.1| putative polyprenyl diphosphate synthase [Oryza sativa Japonica Group] gi|57863832|gb|AAS16899.2| putative polyprenyl diphosphate synthase [Oryza sativa Japonica Group] gi|215694846|dbj|BAG90037.1| unnamed protein product [Oryza sativa Japonica Group] gi|222632699|gb|EEE64831.1| hypothetical protein OsJ_19688 [Oryza sativa Japonica Group] Length = 403 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 108/321 (33%), Positives = 176/321 (54%), Gaps = 17/321 (5%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML-------TLATALMLEYRGDN 63 D+ K+N + + ++ ++ + + +GGKRLRP L T A +LE + Sbjct: 91 DLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELAGLLELTTE- 149 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H LA IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+ +Q+ + Sbjct: 150 HQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLAN 209 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 ++ E ++ +S V A GE++Q S + DVT +DYL KTA L +++ +++ Sbjct: 210 LENIEVIKLISQVIKDFASGEIKQASTLFDCDVTLDDYLLKSYYKTASLLASSTRSAAIF 269 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +GV ++ + + YG NLG++FQ+VDD+LD+ ++GK G D G T PVI A Q Sbjct: 270 SGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALQ 329 Query: 244 RGTK-REKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 K RE I D + S ++L A ++ + + + A G A +L+CL Sbjct: 330 DEPKLRE-------IIDSEFSESDSLATAIDLVHRSGGIRRAQELAKEKGDLALQNLQCL 382 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L VV + LQR++ Sbjct: 383 PKSQFRSTLENVVKYNLQRID 403 >gi|299821639|ref|ZP_07053527.1| trans-hexaprenyltranstransferase [Listeria grayi DSM 20601] gi|299817304|gb|EFI84540.1| trans-hexaprenyltranstransferase [Listeria grayi DSM 20601] Length = 323 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 105/315 (33%), Positives = 172/315 (54%), Gaps = 9/315 (2%) Query: 10 KDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV-LL 67 KDM+ +N + + I S + E +L+ +GGKR+RP+ TA + E + + Sbjct: 12 KDMDMINHELKQAIISAEAETTTASALHLLEAGGKRIRPLFVCLTARLTEKPDQSKMKYA 71 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A A+E IH A+++HDDVVD+++LRRG+ + WGN ++ GD+L +++ + K Sbjct: 72 AVAVELIHMASIVHDDVVDNASLRRGRETIKSRWGNHIAMYTGDYLFAKSLDYMTNIKEI 131 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 EA E L+ V LA GE+ QL ++ + YL IK KTA+L + + + ++I+G Sbjct: 132 EAHEMLASVTVELATGEIEQLKSKYDVTQSIRTYLRRIKRKTALLIAVSCGLGAVISGQD 191 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV +A Sbjct: 192 AATTKKLYQFGYYVGMAFQIQDDVLDFVGSQKELGKPAGEDLRQGNITLPVFMAM----A 247 Query: 248 REKNFWKSTIN--DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 E F K+ + + S + + + I++ ++A + A Y +KA L LP S+ Sbjct: 248 NEPTF-KTKLQQLSSESSADFIAECISIVKASKAAEQADEIADRYLEKATAILETLPRST 306 Query: 306 WKKSLMEVVDFCLQR 320 +KSL ++V +R Sbjct: 307 ARKSLKQIVSSLEKR 321 >gi|84494916|ref|ZP_00994035.1| putative polyprenyl diphosphate synthase [Janibacter sp. HTCC2649] gi|84384409|gb|EAQ00289.1| putative polyprenyl diphosphate synthase [Janibacter sp. HTCC2649] Length = 328 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 107/312 (34%), Positives = 166/312 (53%), Gaps = 8/312 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + +V LI +RI D I + +L+ +GGKR RPMLT+ A + E D V A A+ Sbjct: 20 LARVEALIEERIDHDDPFIAEANVHLLRAGGKRFRPMLTILAAELGEGVNDAVVTAAAAV 79 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H A+L HDDV+D++ LRRG A +GN T++L+GD L A +V E + E Sbjct: 80 ELTHLASLYHDDVMDEADLRRGTPTANAAYGNSTAILIGDLLFGHASALVAELGA----E 135 Query: 132 ALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A+ + A T L G++R + + + YL V++ KT VL + A ++ AG ++ Sbjct: 136 AVRIQAETFIRLCTGQIRDDRQAPAGEDSGAYYLRVLEDKTGVLIATAARYGAMFAGCED 195 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 V + ++ YG LG+AFQL DD++D E+GK G D R GK TL V+ A + Sbjct: 196 DVIETMRVYGERLGMAFQLADDLIDIESSAEELGKLPGMDLREGKRTLAVLHALASTSPE 255 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + + ++D E L +A ++R + ALV + G++A+D+L LPDS K Sbjct: 256 DARLQELLLSDLSGDAE-LAEALTLLRAHPALVRARDETRAVGEQAQDALVGLPDSEAKT 314 Query: 309 SLMEVVDFCLQR 320 +L+ + R Sbjct: 315 ALLALATSVTHR 326 >gi|220915526|ref|YP_002490830.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|219953380|gb|ACL63764.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 349 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 156/296 (52%), Gaps = 9/296 (3%) Query: 20 LKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLACAIEFIHT 76 L R D E + ++L+ +GGKR+RPM+TL A E RG V A A E H+ Sbjct: 46 LTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRG--AVPYAVAAELTHS 103 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSL 135 ATLLHDDV+DD +RRG+ A+R++WGN SVL GD+LL++A +V E AL L Sbjct: 104 ATLLHDDVIDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEPARSAALPPLLA 163 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L EGE+ QLSL TE+ Y+ V+ KTA LF A + AG + AL Sbjct: 164 TMRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWAAAAGAWAAGEVGEIPAALV 223 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 +G +G+AFQLVDD LDY + +GK +G D GK TLP+I A + Sbjct: 224 RFGEGIGVAFQLVDDALDYAADPRLLGKRLGTDLIEGKATLPLIRACEAEPALRGRL--G 281 Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSL 310 + DG VE + I + + VD A + + A ++L +PD +++L Sbjct: 282 GVVDGTADVEAVAGEVIAVVKRVGGVDAARALAREHTRTALEALEQVPDGVHRRAL 337 >gi|218197333|gb|EEC79760.1| hypothetical protein OsI_21146 [Oryza sativa Indica Group] Length = 581 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 17/292 (5%) Query: 40 SGGKRLRPML-------TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +GGKRLRP L T A +LE + H LA IE IHTA+L+HDDV+DDS +RR Sbjct: 298 AGGKRLRPALVFLVSRATAELAGLLELTTE-HQRLAEIIEMIHTASLIHDDVIDDSGMRR 356 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 GK ++G + +VL GDF+ +Q+ + ++ E ++ +S V A GE++Q S Sbjct: 357 GKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLF 416 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + DVT +DYL KTA L +++ +++ +GV ++ + + YG NLG++FQ+VDD+L Sbjct: 417 DCDVTLDDYLLKSYYKTASLLASSTRSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDIL 476 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK-REKNFWKSTINDGKIS-VENLKKA 270 D+ ++GK G D G T PVI A Q K RE I D + S ++L A Sbjct: 477 DFTQSAEQLGKPAGSDLAKGNLTAPVIFALQDEPKLRE-------IIDSEFSESDSLATA 529 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 ++ + + + A G A +L+CLP S ++ +L VV + LQR++ Sbjct: 530 IDLVHRSGGIRRAQELAKEKGDLALQNLQCLPKSQFRSTLENVVKYNLQRID 581 >gi|325268320|ref|ZP_08134953.1| trans-hexaprenyltranstransferase [Prevotella multiformis DSM 16608] gi|324989462|gb|EGC21412.1| trans-hexaprenyltranstransferase [Prevotella multiformis DSM 16608] Length = 326 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 157/293 (53%), Gaps = 1/293 (0%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V+ ++ GKR+RP+L L A + + A +E +HTA+L+HDDVVD+S Sbjct: 32 LLQTVLNHIRQRAGKRMRPILILLIAKNFGKVSEATLHAAVGLELLHTASLVHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 A RRG+ + + N+ +VLVGD++LS A V T S+ + L+ + TL++GE+ QL Sbjct: 92 AERRGQASVNADYDNKVAVLVGDYVLSTALLYVSHTHSEAIVRRLAGLGQTLSDGEILQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S + D+TEE Y +I+ KTA LF A + ++ AG A + +G NLGI FQ+ Sbjct: 152 SNIQRKDITEEAYYRIIERKTAALFEACAAIGAVSAGASEEEVDAARCFGKNLGIVFQIR 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+ DY +GK G D GK TLPVI A E + + ++ E + Sbjct: 212 DDIFDYYDSETNIGKPTGNDLAEGKLTLPVIYALNSAKNDEMLALANKVKAHDVTREEIG 271 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320 + +++ + E R + + +A+ L R + D S + SL +D+ ++R Sbjct: 272 RLVAFAKKSGGIEYAERRMWDFHAEAQTFLDRYVKDESIRTSLRSYLDYVIKR 324 >gi|120601259|ref|YP_965659.1| trans-hexaprenyltranstransferase [Desulfovibrio vulgaris DP4] gi|120561488|gb|ABM27232.1| Trans-hexaprenyltranstransferase [Desulfovibrio vulgaris DP4] Length = 321 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 105/320 (32%), Positives = 175/320 (54%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ L+ + + + N + + + ++ V +++ +GGKRLRP+LTL A L Y Sbjct: 1 MQELKARIIAEQPRFNATLATEVGTLHPLVQPVAAHVLKAGGKRLRPLLTLLVARALGYA 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D+ LAC++E +H+ATLLHDD++DD+ LRRG AA V+G+ +VL GD LL+ A + Sbjct: 61 DDDIYPLACSVELLHSATLLHDDILDDADLRRGMAAAHTVFGSTATVLAGDALLALANLI 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V +S A GE+ +++ + D + Y+ +I KTA + A+ E+ Sbjct: 121 VARYGDPRLTACISEAIIRTATGEIVEIAHMRGTDHGRDTYIDIITGKTAWMLRASCELG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L AG +A ++G++LGIAFQ+VDD LD+ + + GK +G D R GK T P+I Sbjct: 181 ALRAGASEEAVRAAAAFGLDLGIAFQIVDDALDF-ADRADTGKPVGGDLREGKLTPPLIY 239 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + + E+ + S DG S +++ + +R + T A +Y +KA SL Sbjct: 240 YLETLSGPEREAFISRFRDGGFSGDDVARISAEIRTLGIIERTRELAGNYIEKAAASLET 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD +++LM+ + + R Sbjct: 300 LPDCPERRTLMQTLAYVQHR 319 >gi|46581581|ref|YP_012389.1| octaprenyl-diphosphate synthase [Desulfovibrio vulgaris str. Hildenborough] gi|46451004|gb|AAS97649.1| octaprenyl-diphosphate synthase [Desulfovibrio vulgaris str. Hildenborough] gi|311235224|gb|ADP88078.1| Polyprenyl synthetase [Desulfovibrio vulgaris RCH1] Length = 321 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 105/320 (32%), Positives = 175/320 (54%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ L+ + + + N + + + ++ V +++ +GGKRLRP+LTL A L Y Sbjct: 1 MQELKARIIAEQPRFNATLATEVGTLHPLVQPVAAHVLKAGGKRLRPLLTLLVARALGYA 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D+ LAC++E +H+ATLLHDD++DD+ LRRG AA V+G+ +VL GD LL+ A + Sbjct: 61 DDDIYPLACSVELLHSATLLHDDILDDADLRRGMAAAHTVFGSTATVLAGDALLALANLI 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V +S A GE+ +++ + D + Y+ +I KTA + A+ E+ Sbjct: 121 VARYGDPRLTACISEAIIRTATGEIVEIAHMRGTDHGRDTYIDIITGKTAWMLRASCELG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L AG +A ++G++LGIAFQ+VDD LD+ + + GK +G D R GK T P+I Sbjct: 181 ALRAGASEEAVRAAAAFGLDLGIAFQIVDDALDF-ADRADTGKPVGGDLREGKLTPPLIY 239 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + + E+ + S DG S +++ + +R + T A +Y +KA SL Sbjct: 240 YLETLSGPEREAFISRFRDGGFSGDDVARISAEIRALGIIERTRELAGNYIEKAAASLET 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD +++LM+ + + R Sbjct: 300 LPDCPERRTLMQTLAYVQHR 319 >gi|320530437|ref|ZP_08031495.1| polyprenyl synthetase [Selenomonas artemidis F0399] gi|320137270|gb|EFW29194.1| polyprenyl synthetase [Selenomonas artemidis F0399] Length = 321 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 100/317 (31%), Positives = 165/317 (52%), Gaps = 2/317 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML-TLATALMLEYRGDNH 64 D+ +D+ + + + SD ++ D+ +L+ SGGKRLRP L LA ++ D Sbjct: 3 DVIEEDLTVLEAALEAALSSDSALVSDIGAHLVSSGGKRLRPALFLLAARAGADFDRDRA 62 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + +A A+E IHTA+L+HDDV+D++ RRG WGNQ ++L GD++ ++AF V Sbjct: 63 MPIAVALELIHTASLVHDDVIDEADTRRGSATTNAKWGNQVAILSGDYIFARAFKQVARV 122 Query: 125 K-SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S L+ + CTL+EGE+ Q + V+E+ Y I+ KTA E+ + I Sbjct: 123 GYSSHIYMRLADLVCTLSEGEILQDHTVYQVPVSEDAYYERIRKKTADFLEICCELGAGI 182 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+ YG +G+AFQ+ DD+LD + +GK G D G TLPVI A Sbjct: 183 GGMSAEDTANFARYGHAIGMAFQITDDLLDLQQTAERIGKPAGRDLAQGYVTLPVIRALS 242 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 ++ + + I + K+S E + +A ++R + T+ +A +Y +AK +L D Sbjct: 243 VLDEKARAELTALITNPKMSEEEVARALALVRATDGIDYTQEQADAYLARAKSALPASLD 302 Query: 304 SSWKKSLMEVVDFCLQR 320 +++ + DF +R Sbjct: 303 PRIRETCLMAADFIGRR 319 >gi|325859901|ref|ZP_08173031.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A] gi|327312867|ref|YP_004328304.1| polyprenyl synthetase [Prevotella denticola F0289] gi|325482827|gb|EGC85830.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A] gi|326945844|gb|AEA21729.1| polyprenyl synthetase [Prevotella denticola F0289] Length = 326 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 103/313 (32%), Positives = 166/313 (53%), Gaps = 3/313 (0%) Query: 11 DMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 D+E +F+ L D E ++ V+ ++ GKR+RP+L L A + A Sbjct: 12 DVELDDFIDLFNHALDHEDGLLQTVLNHIRQRAGKRMRPILILLIAKNFGKVSEATQHAA 71 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E +HTA+L+HDDVVD+SA RRG+ + + N+ +VLVGD++LS A V T S+ Sbjct: 72 VGLELLHTASLVHDDVVDESAERRGQASVNADYDNKVAVLVGDYVLSTALLYVSHTHSEA 131 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + L+ + TL++GE+ QLS + D+TEE Y +I+ KTA LF A + ++ AG Sbjct: 132 IVRRLAGLGQTLSDGEILQLSNIQCKDITEEAYYRIIERKTAALFEACAAIGAVSAGASE 191 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 A + +G NLGI FQ+ DD+ DY +GK G D GK TLPVI A Sbjct: 192 EEVDAARCFGKNLGIVFQIRDDIFDYYDSETNIGKPTGNDLAEGKLTLPVIYALNSAKND 251 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWK 307 E + + +++ E + + +E+ + E R + + +A+ L + + D S + Sbjct: 252 EMLALANKVKAHEVTREEIGRLVAFAKESGGIEYAERRMWDFHAEAQTFLDKYVKDESIR 311 Query: 308 KSLMEVVDFCLQR 320 SL +D+ ++R Sbjct: 312 TSLQTYLDYVIKR 324 >gi|115488130|ref|NP_001066552.1| Os12g0271700 [Oryza sativa Japonica Group] gi|113649059|dbj|BAF29571.1| Os12g0271700 [Oryza sativa Japonica Group] Length = 372 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 107/321 (33%), Positives = 175/321 (54%), Gaps = 17/321 (5%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML-------TLATALMLEYRGDN 63 D+ K+N + + ++ ++ + + +GGKRLRP L T A +LE + Sbjct: 60 DLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELAGLLELTTE- 118 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H LA IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+ +Q+ + Sbjct: 119 HQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLAN 178 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 ++ E ++ +S V A GE++Q S + D+T +DYL KTA L +A+ +++ Sbjct: 179 LENIEVIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAIF 238 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +GV ++ + + YG NLG++FQ+VDD+LD+ ++GK G D G T PVI A Q Sbjct: 239 SGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALQ 298 Query: 244 RGTK-REKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + RE I D + S N L A ++ + + A G+ A SL+CL Sbjct: 299 DEPQLRE-------IIDSEFSETNSLATAIELVHRSGGIKRAHELAREKGEIAIQSLQCL 351 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L +V + L+R++ Sbjct: 352 PRSEFRSTLENMVKYNLERID 372 >gi|163786379|ref|ZP_02180827.1| octaprenyl-diphosphate synthase [Flavobacteriales bacterium ALC-1] gi|159878239|gb|EDP72295.1| octaprenyl-diphosphate synthase [Flavobacteriales bacterium ALC-1] Length = 325 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 167/306 (54%), Gaps = 16/306 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + Y++ GK++RPM A M+ YRG A IE I Sbjct: 26 MASKVALLNRITHYIVNRKGKQMRPMFVFLVAKMMNNGEVSERTYRG------ASVIELI 79 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVDDS RRG + +W N+ +VL+GD+LLS+ + I+ + L+ +S Sbjct: 80 HTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLIGDYLLSKGLLLSIDNNDFDLLKIIS 139 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + ++EGEL Q+ ++ LD+TE Y +I+ KTA L +A + + + +++ Sbjct: 140 VAVREMSEGELLQIEKARQLDITEAVYYDIIRQKTATLIAACCSLGAASVKPNSPEVESM 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + +G +G+AFQ+ DD+ DY E +GK G D + K TLP+I +K+EK++ Sbjct: 200 RKFGELIGMAFQIKDDLFDYGEEA--IGKPTGIDIKEQKMTLPLIHVLNNCSKKEKSWLI 257 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 +++ + + +K+ ++ N L + ++ ++A L P+S++K SL +V Sbjct: 258 NSVKNHNKDKKRVKEVIAFVKSNGGLDYAVSKMKAFQEEALAILSKYPESAYKASLKLMV 317 Query: 315 DFCLQR 320 D+ + R Sbjct: 318 DYVIDR 323 >gi|78358229|ref|YP_389678.1| trans-hexaprenyltranstransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220634|gb|ABB39983.1| Trans-hexaprenyltranstransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 322 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 110/315 (34%), Positives = 170/315 (53%), Gaps = 16/315 (5%) Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 KVN + + M+ V +++ +GGKRLRP+L + A L GD+ LAC++E Sbjct: 14 KVNETLAAETGTLNTMVQPVATHVLSAGGKRLRPLLAILFARALGRGGDDIYPLACSVEL 73 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H+ATLLHDD++DD+ALRRG AA ++G+ ++L GD LL+ A +V E + Sbjct: 74 LHSATLLHDDIIDDAALRRGLPAAHTLFGSTRTILAGDALLALANLIVSRYGDTRLTECI 133 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + A GE+ ++ ++ +E Y+ +IK KTA + A+ ++ ++ AG QA Sbjct: 134 ARAIIETATGEIAEIEYLRSTGHPQETYIEIIKGKTAWMIQASCQLGAIAAGATAQQEQA 193 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR--GTKREK- 250 +GMNLGIAFQ+VDD LD+ E GK + D R GK T P+ + +R G R++ Sbjct: 194 ACDFGMNLGIAFQIVDDALDFSPSAGETGKPVAGDLREGKLTPPLHMYLERLEGADRQEF 253 Query: 251 --NFWKSTINDGKISVENLKKAFI---IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 F T +D V+N+ +A + + R L DT Y +KA D+L L +S Sbjct: 254 LHKFTTGTFSDA--DVDNVARAVRGQGLDKATRDLADT------YLKKAADALHMLDESR 305 Query: 306 WKKSLMEVVDFCLQR 320 K L + VD+ R Sbjct: 306 EKTVLRQTVDYVKNR 320 >gi|218196351|gb|EEC78778.1| hypothetical protein OsI_19015 [Oryza sativa Indica Group] Length = 414 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 107/321 (33%), Positives = 175/321 (54%), Gaps = 17/321 (5%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML-------TLATALMLEYRGDN 63 D+ K+N + + ++ ++ + + +GGKRLRP L T A +LE + Sbjct: 102 DLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELAGLLELTTE- 160 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H LA IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+ +Q+ + Sbjct: 161 HQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLAN 220 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 ++ E ++ +S V A GE++Q S + D+T +DYL KTA L +A+ +++ Sbjct: 221 LENIEVIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAIF 280 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +GV ++ + + YG NLG++FQ+VDD+LD+ ++GK G D G T PVI A Q Sbjct: 281 SGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALQ 340 Query: 244 RGTK-REKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + RE I D + S N L A ++ + + A G+ A SL+CL Sbjct: 341 DEPQLRE-------IIDSEFSETNSLATAIELVHRSGGIKRAHELAREKGEIAIQSLQCL 393 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L +V + L+R++ Sbjct: 394 PRSEFRSTLENMVKYNLERID 414 >gi|223940506|ref|ZP_03632355.1| Polyprenyl synthetase [bacterium Ellin514] gi|223890830|gb|EEF57342.1| Polyprenyl synthetase [bacterium Ellin514] Length = 350 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 91/291 (31%), Positives = 157/291 (53%), Gaps = 3/291 (1%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D ++P +Y + GK+LRP L +A D+HV +A IE +H ATL+HDDV+ Sbjct: 51 DPAIVP-YAEYALTGQGKQLRPALVALSANASGTLNDSHVTIAVIIEMVHLATLVHDDVM 109 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D++ +RRG++ WGN+ +VL GD L + A + + E A+++ T+ GE+ Sbjct: 110 DEAEIRRGRLTLAANWGNEIAVLFGDCLFAHALKLAASFPTPEICRAVAMATNTVCSGEI 169 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 Q +N ++ +Y V++ KTA LF+ + ++ + + G R L+ +GM LG A+ Sbjct: 170 LQTQQRRNFQFSQPEYFKVLEMKTAELFALSCDLGACLTGAPAVQRNGLRQFGMALGTAY 229 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 QL DD LD G GK++G D GK TLP++LA+++ T EK + I K Sbjct: 230 QLYDDCLDLFGSEAAAGKSLGTDLAKGKLTLPILLAWEQATVEEKATLQGNIL--KWEPG 287 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 + ++R+ + + Y +K++ +L+ LP+S+ + L+ + +F Sbjct: 288 HFAPVIELLRKYKTFAKSVEIINQYLEKSRQTLKVLPESANQAGLIGLTEF 338 >gi|262341076|ref|YP_003283931.1| polyprenyl synthetase family protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272413|gb|ACY40321.1| polyprenyl synthetase family protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 325 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 161/299 (53%), Gaps = 7/299 (2%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+V +I + Y+I GK +RP+ A ML AC IE IHTATL+HDDV Sbjct: 29 SNVSLIDQITHYIIHRKGKLIRPIFVFLIAKMLGNIQKKTYHTACLIELIHTATLVHDDV 88 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D+S+LRRG + +W N+ +VL+GD+LLS++ + + L+ + ++EGE Sbjct: 89 IDNSSLRRGSFSINAIWKNKIAVLIGDYLLSKSLLLATNNNYYDLLKIICQTIKDMSEGE 148 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ S L++TE+ Y +I KTA L +A+ E + V ++ +G+ +GIA Sbjct: 149 LLQMEESDKLNITEKTYNQIIYHKTASLIAASCECGARSVNVDEKTALKMRKFGLFVGIA 208 Query: 205 FQLVDDVLDYRGEVNEM-GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 FQ+ DD+ DY + N GK IG D R K TLP+I ++ +K ++ + ++I + Sbjct: 209 FQIKDDLFDYEEKNNNFTGKPIGIDLREKKITLPLIYTIRKASKEDQKWILNSIKN---- 264 Query: 264 VENLKKAFII--MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + K+ II +++ L + + A L P+S KK+L +V+F ++R Sbjct: 265 YDEKKRDKIIDSVKKYGGLEYATQKMIKFRNNALKILELYPESPIKKALKIMVNFIVER 323 >gi|255010272|ref|ZP_05282398.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12] gi|313148068|ref|ZP_07810261.1| octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12] gi|313136835|gb|EFR54195.1| octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12] Length = 324 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 157/288 (54%), Gaps = 1/288 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+ ++ GK +RP+L L A + + A ++E +HTA+L+HDDVVD+S RR Sbjct: 36 VIAHIRQRNGKMMRPILVLLVAKLYGEIKPATLHAAVSLELLHTASLVHDDVVDESTERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VLVGDFLL+ + T++ + + ++ + LAEGE+ QLS Sbjct: 96 GQLSVNAIFNNKVAVLVGDFLLATSLVHAERTRNHDIIGVVACLGQDLAEGEILQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N + +E Y VI+ KTA LF+A + ++L + + + + +G N+GI FQ+ DD+ Sbjct: 156 NREYSETIYFDVIRKKTAALFAACTKAAALSVEITDEKAEFARLFGENIGICFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E E+GK G D GK TLP + + DG +V+ + + Sbjct: 216 DYF-ESKEIGKPTGNDMLEGKLTLPALYVLNTTNDAWAQEMALKVKDGTATVDEIARLIE 274 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +++N + Y Y ++A D LR LPDS+ K +L+ VD+ + R Sbjct: 275 FIKQNGGIEYAIKVMYEYKERALDLLRMLPDSAVKTALITYVDYVVDR 322 >gi|295135349|ref|YP_003586025.1| polyprenyl synthetase [Zunongwangia profunda SM-A87] gi|294983364|gb|ADF53829.1| polyprenyl synthetase [Zunongwangia profunda SM-A87] Length = 311 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 168/309 (54%), Gaps = 16/309 (5%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAI 71 + + S V ++ + Y++ GK++RPM A M+ YRG A I Sbjct: 9 FQSMSSKVALLNRITHYIVNRKGKQMRPMFVFLVAKMVSDGKVNERTYRG------ASVI 62 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + I+ + L+ Sbjct: 63 ELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNNDFDLLK 122 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A + + + Sbjct: 123 IISVAVREMSEGELLQIEKARRLDITEEVYYDIIRQKTATLIAACCSLGAASVKPDSGDV 182 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + ++ +G +G+AFQ+ DD+ DY E ++GK G D + K TLP+I A K+EK Sbjct: 183 ENMRRFGELIGMAFQIKDDLFDYGEE--KIGKPTGIDIKEQKMTLPLIYALNHSDKKEKA 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + +++ + + +K+ +++ L + + Q+A L P+S +K+SL Sbjct: 241 WIINSVKNHNKDKKRVKEVIAFVKDKGGLEYASSQMILFQQEALKILDEYPESRYKESLE 300 Query: 312 EVVDFCLQR 320 +V++ ++R Sbjct: 301 LMVNYVIER 309 >gi|326524578|dbj|BAK00672.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 394 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALM--L 57 L D+ D+ K+N + I ++ ++ + + +GGKRLRP L ATA + L Sbjct: 75 LLDVVSDDLLKLNNNLKSLIGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEVAGL 134 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 H LA IE IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+ +Q+ Sbjct: 135 SELTTEHKRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRIAVLAGDFMFAQS 194 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + ++ E ++ +S V A GE++Q S + DVT +DYL KTA L +++ Sbjct: 195 SWFLANLENIEVIKLISQVIKDFASGEIKQQSTLFDCDVTLDDYLLKSYYKTASLLASST 254 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +++ +GV +V + + YG NLG++FQ+VDD+LD+ ++GK G D G T P Sbjct: 255 RSAAIFSGVSTTVCEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAP 314 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 VI A Q E + I+ +L A ++ ++ + + A G A + Sbjct: 315 VIFALQ-----ESPELREIIDSEFCDTGSLSAAMELVHKSGGIRRAQELAKEKGDLALQN 369 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 L+CLP S ++ +L +V + L+R++ Sbjct: 370 LQCLPRSHFRTALENMVTYNLERID 394 >gi|53711383|ref|YP_097375.1| octaprenyl-diphosphate synthase [Bacteroides fragilis YCH46] gi|60679701|ref|YP_209845.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis NCTC 9343] gi|253564510|ref|ZP_04841967.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_2_5] gi|265764829|ref|ZP_06093104.1| heptaprenyl diphosphate synthase component II protein [Bacteroides sp. 2_1_16] gi|52214248|dbj|BAD46841.1| octaprenyl-diphosphate synthase [Bacteroides fragilis YCH46] gi|60491135|emb|CAH05883.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis NCTC 9343] gi|251948286|gb|EES88568.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_2_5] gi|263254213|gb|EEZ25647.1| heptaprenyl diphosphate synthase component II protein [Bacteroides sp. 2_1_16] gi|301161165|emb|CBW20703.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis 638R] Length = 324 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 157/288 (54%), Gaps = 1/288 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+ ++ GK +RP+L L A + + A ++E +HTA+L+HDDVVD+S RR Sbjct: 36 VIAHIRQRNGKMMRPILVLLVAKLYGEIKPETLHAAVSLELLHTASLVHDDVVDESTERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VLVGDFLL+ + T++ + + ++ + LAEGE+ QLS Sbjct: 96 GQLSVNAIFNNKVAVLVGDFLLATSLVHAERTRNHDIIGVVACLGQDLAEGEILQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N + +E Y VI+ KTA LF+A + ++L V + + + +G N+GI FQ+ DD+ Sbjct: 156 NREYSETIYFDVIRKKTAALFAACTKAAALSVEVTDEKAEFARLFGENIGICFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E E+GK G D GK TLP + T + G +V+ + + Sbjct: 216 DYF-ESKEIGKPTGNDMLEGKLTLPALYVLNTTTDAWAQEMALRVKAGTATVDEITRLIE 274 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +++N + Y Y ++A D LR LPDS+ K SL+ +D+ + R Sbjct: 275 FIKQNGGIEYAVKVMYEYKERALDLLRTLPDSAVKTSLITYLDYVVDR 322 >gi|332521667|ref|ZP_08398120.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4] gi|332042756|gb|EGI78956.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4] Length = 300 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 93/306 (30%), Positives = 167/306 (54%), Gaps = 16/306 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + Y++ GK++RPM A M+ YRG A IE I Sbjct: 1 MSSKVALLNRITHYIVNRKGKQMRPMFVFLVAKMVSNGEVKERTYRG------ASVIELI 54 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVDDS RRG + +W N+ +VL+GD+LLS+ + I+ + + L+ +S Sbjct: 55 HTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLIGDYLLSKGLLLSIDNEDFDLLKIIS 114 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + ++EGEL Q+ ++ LD+TE Y +I+ KTA L +A + + + + Sbjct: 115 VAVREMSEGELLQIEKARKLDITETIYYEIIRQKTATLIAACCSLGAASVKPNTLEVETM 174 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + +G +G+AFQ+ DD+ DY + +GK +G D + K TLP+I +K++K + Sbjct: 175 RKFGELIGMAFQIKDDLFDYGSK--SIGKPVGIDIKEQKMTLPLIYVLNNSSKQDKRWLI 232 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 ++I + + + + +++N L + ++ +A D L+ P+S ++ SL +V Sbjct: 233 NSIKNHNKDKKRVDQVITFVKDNGGLDYAVKKMKAFQNEALDILKNFPESEYRASLELMV 292 Query: 315 DFCLQR 320 ++ ++R Sbjct: 293 NYVIER 298 >gi|289579302|ref|YP_003477929.1| trans-hexaprenyltranstransferase [Thermoanaerobacter italicus Ab9] gi|289529015|gb|ADD03367.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter italicus Ab9] Length = 322 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 95/302 (31%), Positives = 170/302 (56%), Gaps = 7/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 KRI + + I +++ +I++ GK LRP + EY + + LA AIE +H ATL+ Sbjct: 24 KRIKNSNKSIRNILLDMIYNSGKMLRPAFVILAGKFGEYDREKILPLAAAIEMLHMATLV 83 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD++D++ +RR K + +G +V +GDFL S++F ++ + + L+ +S V + Sbjct: 84 HDDIIDNALIRRSKPTIQAEYGKDYAVFIGDFLFSESFLLLSDNITVSNLKKVSKVVSKI 143 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q N+ +T DYL I +KTA LF+ + V + + S+ +AL S G N Sbjct: 144 CKGEIGQFESRHNIYITINDYLRRIAAKTAALFALSFYVGAYESKCDESLAKALGSIGYN 203 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE--KNFWKSTIN 258 +G+AFQ++DD+LDY G+ +GK +G D + G TLP+I + + ++ + K + + Sbjct: 204 IGMAFQIIDDILDYTGQEAVVGKPLGNDIKEGVFTLPLIYSLDKNKDKKILELLKKESYS 263 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 D +++++ ++++ + ++ A Y +KA D + L DS K+ L+EV L Sbjct: 264 D-----DDIQQIIEFVQQSGGIDKSKMLAQKYTEKAFDKISMLKDSPPKQVLIEVTGKLL 318 Query: 319 QR 320 R Sbjct: 319 YR 320 >gi|332664666|ref|YP_004447454.1| trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM 1100] gi|332333480|gb|AEE50581.1| Trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM 1100] Length = 322 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 157/296 (53%), Gaps = 2/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S V ++ + Y++ GK++RPM A + + + A IE +HTATL+HDDV Sbjct: 27 SSVPLLDKITYYIVRRKGKQVRPMFVFLAAQVCGGVVEATYVAASLIELLHTATLVHDDV 86 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VDDS RRG + +W N+ +VLVGDFLLSQ + + K LE +S ++EGE Sbjct: 87 VDDSMERRGFFSVNALWKNKIAVLVGDFLLSQGLLLAVRNKQFRILEIVSDAVKAMSEGE 146 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ ++ LD+ EE Y +I+ KTA L S+A + + A + ++ +G +G+A Sbjct: 147 LLQIEKARRLDIKEEVYYEIIRQKTASLISSACQAGAASATTDEDAIERMRLFGEKIGLA 206 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD+ D+ +++GK +G D + K TLP+I A + + + + Sbjct: 207 FQIKDDLFDF--GTDDVGKPLGIDIKEKKMTLPLIYALNKSDSATRRHIIGLVRRHNENP 264 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E +K+ +R + + TE + Q+A D L P+S + +L ++V F +R Sbjct: 265 EKVKEVIDFVRNSGGIQYTEAVMLRFRQEAFDILETFPESESRTALRDLVTFVTER 320 >gi|224536943|ref|ZP_03677482.1| hypothetical protein BACCELL_01819 [Bacteroides cellulosilyticus DSM 14838] gi|224521430|gb|EEF90535.1| hypothetical protein BACCELL_01819 [Bacteroides cellulosilyticus DSM 14838] Length = 324 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 157/292 (53%), Gaps = 1/292 (0%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ +V+ ++ GK +RP+L L A + + A ++E +HTA+L+HDDVVD+S Sbjct: 32 LLNEVISHIRQKNGKMMRPILLLLVAKLYGRICPESLHAAVSLELLHTASLVHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+++ ++ N+ +VLVGD+LL+ A V +T + ++ +S + L+EGEL QL Sbjct: 92 TERRGQLSVNAIYNNKVAVLVGDYLLATALVQVGKTHNYAIIDVVSRLGQNLSEGELLQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S NL +EE Y VI+ KTAVLF+A + +L GV + + + +G +G+ FQ+ Sbjct: 152 SNVSNLQFSEEIYFDVIRKKTAVLFAACTKSGALSVGVTDEQAEFARQFGEYIGLCFQIK 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+ DY + E+GK G D GK TLPV+ A + +G S + + Sbjct: 212 DDIFDYY-DSKEIGKPTGNDMLEGKLTLPVLYALNSTKDESAEEIAVKVKNGTASADEIA 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + ++ + ++Y +KA L LPDS K L +D+ + R Sbjct: 271 RLIEFAKQQGGIEYAVQTMFAYKEKALSLLASLPDSDVKAGLAAYLDYVVDR 322 >gi|309388901|gb|ADO76781.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228] Length = 319 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 169/307 (55%), Gaps = 3/307 (0%) Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 K+N IL+ S +I + V LI GGK+LRP L A +Y + + L IE Sbjct: 14 KLNENILEITNSKRRIINEAVSDLIKGGGKKLRPFLMFLAASFGDYDQEKLLQLGSGIEL 73 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H ++LLHDDV+D++ LRRGK A+ +G + +V +GDFLLS++F + + + L + Sbjct: 74 LHMSSLLHDDVIDNAKLRRGKKTAQHKFGKEEAVFIGDFLLSRSFNIFFKYLDKSTLGKM 133 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L EGE+ Q +L+++ DY I+ KTA+ F+ + + + ++GV+ Sbjct: 134 NKNVSLLCEGEIEQSEKKFDLEISMRDYYRRIRHKTALFFALSSYLGAYVSGVRGKKLNL 193 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L G+ +G+AFQ+ DD+LD+ GE E GK + +D + G TLPVIL F + R K + Sbjct: 194 LYKLGLEIGMAFQIKDDLLDFEGEEEETGKILAQDLKEGIITLPVILLFNKEKYRNK--Y 251 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 K N+ K+ E + ++ AL +++ + + K L LP++ KK L ++ Sbjct: 252 KRY-NNKKLEPEVVASIIADLKVAGALDESQDILLRFINRVKKYLEQLPNNKAKKRLKKL 310 Query: 314 VDFCLQR 320 V+ ++R Sbjct: 311 VEAQIER 317 >gi|284037886|ref|YP_003387816.1| trans-hexaprenyltranstransferase [Spirosoma linguale DSM 74] gi|283817179|gb|ADB39017.1| Trans-hexaprenyltranstransferase [Spirosoma linguale DSM 74] Length = 324 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 107/305 (35%), Positives = 163/305 (53%), Gaps = 20/305 (6%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTAT 78 SDV ++ ++ Y++ GK+LRPM A + YRG A IE +HTAT Sbjct: 29 SDVMLLDQIMNYIVKRKGKQLRPMFVFLMAGVCGSITEATYRG------ASLIELLHTAT 82 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L+HDDVVD+S RRG + +W N+ +VLVGD+LLS+ + ++ + L +S Sbjct: 83 LVHDDVVDESNYRRGFFSINALWKNKVAVLVGDYLLSRGLLLSVDNNDFDLLRIVSTAVR 142 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L+EGEL QL ++ LD+TE+ Y +I+ KTA L +A V + AG+ V + ++G Sbjct: 143 ELSEGELLQLYKARRLDITEDIYYEIIRQKTASLIAACCAVGARSAGIDPQVVEKAHAFG 202 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +GIAFQ+ DD+ DY E+GK +G D + K TLP+I A + EK + IN Sbjct: 203 EKVGIAFQIKDDLFDY--GTAEVGKPLGIDIKEKKMTLPLIYALNKAGYLEK---RRIIN 257 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYS---YGQKAKDSLRCLPDSSWKKSLMEVVD 315 K E KK ++ + EY + Y +A+ L PDS ++ SL ++V Sbjct: 258 IIKNESEKPKKVNEVIDFVKKSGGIEYATGAMNDYVAQAQALLNDFPDSVYRSSLHKLVQ 317 Query: 316 FCLQR 320 + + R Sbjct: 318 YTIDR 322 >gi|15606228|ref|NP_213606.1| octoprenyl-diphosphate synthase [Aquifex aeolicus VF5] gi|2983415|gb|AAC06998.1| octoprenyl-diphosphate synthase [Aquifex aeolicus VF5] Length = 304 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 169/302 (55%), Gaps = 10/302 (3%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +++ + V ++ + +Y++ SGGKRLRP+ TL + M + L A+E+IH A+ Sbjct: 11 LVEELNPKVRLVLETGRYIVESGGKRLRPLFTLLVSGMCGGDPSKALPLGVALEYIHVAS 70 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 LLHDDVVD + RRG+ +A LV+GN +VL GD++ +++ + + E + +S V Sbjct: 71 LLHDDVVDRAKTRRGRESANLVFGNGVAVLTGDYMYAKSLHLFSTYGNMEMIRLVSGVVM 130 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 +AEG++ ++S ++ ++EE+Y +I KT VLF A V ++ +G R+ L G Sbjct: 131 DMAEGQVLEISKVGDI-ISEEEYFQIIDGKTGVLFGACFGVGAM-SGECGDWRE-LYEAG 187 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + LG AFQL+DD LDY G+ +GK +G D R GK T P+I + E + Sbjct: 188 LRLGRAFQLIDDALDYEGDPKVLGKPVGNDLREGKCTYPLISVLDNLDREEVKRVLRGLE 247 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 D E L+K + E + T+ RA + K+ + P++ +K+ +++++DF + Sbjct: 248 DS----EKLRKKVV---ELGGVEKTKERAKEELKVVKEIISKYPENEYKREILKLIDFVV 300 Query: 319 QR 320 +R Sbjct: 301 ER 302 >gi|22299300|ref|NP_682547.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1] gi|22295483|dbj|BAC09309.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1] Length = 323 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 162/291 (55%), Gaps = 10/291 (3%) Query: 35 KYLIFSGGKRLRPMLT-LATALMLEYRG--DNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L + GKR+RP + L + L +G H LA E IHTA+L HDDVVD + LR Sbjct: 38 EHLFAASGKRIRPAIVFLVSRATLPDQGITPRHCRLAEITEMIHTASLFHDDVVDQAQLR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG V+GN+ ++ GDFL +QA + + + + ++ LS V AEGE+RQ Sbjct: 98 RGVPTVNSVFGNRVAIQAGDFLFAQASWYLADLDNLQVVKLLSQVIKDFAEGEIRQGFNR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +T +DYL KTA L + + + +++++ +A+ +YG NLG+AFQ+VDD+ Sbjct: 158 FDTSITLDDYLLKTYYKTASLIANSAKAAAVLSEAPPETIEAMYTYGKNLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE-NLKKA 270 LD+ E+GK G D R+G T PV+ A + + T+ + + S E +L+ A Sbjct: 218 LDFTRSTAELGKPAGSDLRDGNLTAPVLFALPKAP------YLHTLIEREFSEEGDLETA 271 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++R++ A+ D A Y Q A +L LP S +++L ++ D+ L+RL Sbjct: 272 LNLVRQSGAIEDARNLAKEYAQAALPALEVLPPSEPRQALSQLTDYVLERL 322 >gi|332291133|ref|YP_004429742.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5] gi|332169219|gb|AEE18474.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 325 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 165/304 (54%), Gaps = 16/304 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFIHT 76 S V ++ + Y++ GK++RPM TA M+ YRG A IE IHT Sbjct: 28 SKVALLNRITHYIVNRKGKQMRPMFVFLTAKMMNNGEVNDRTYRG------ASVIELIHT 81 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+L+HDDVVDDS +RRG + +W N+ +VLVGDFL S+ + I+ + L+ +S+ Sbjct: 82 ASLVHDDVVDDSNIRRGFFSLNALWKNKIAVLVGDFLFSKGLLLSIDNGDTDLLQIISVA 141 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A + + ++ + + Sbjct: 142 VREISEGELLQIEKARKLDITEDLYYEIIRQKTATLIAACCAMGACAVHAKDKEVKRMHK 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 +G +G+AFQ+ DD+ DY ++GK G D + K TLP+I +K++KN+ ++ Sbjct: 202 FGELIGMAFQIKDDLFDY--GTAKIGKPTGIDIKEQKMTLPLIYVLNTVSKKDKNWLINS 259 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 I + + + + +R+N L + + Q+A + L P S ++ SL +V++ Sbjct: 260 IKNKNTDKKRVNEVIAFVRDNGGLEYAVTKMKALQQEALEILMTYPKSVYRDSLELMVNY 319 Query: 317 CLQR 320 + R Sbjct: 320 VIDR 323 >gi|260893125|ref|YP_003239222.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4] gi|260865266|gb|ACX52372.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4] Length = 320 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 162/311 (52%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D+ +V I + + + + +L+ +GGKRLRP L L A Y + + LA Sbjct: 10 EDLARVEEEIRRVVAGAPPPLREAALHLLAAGGKRLRPALALLCAHFGRYSLERVLPLAA 69 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+E IH ATL+HDDV+D + +RRG WG +T++ VGD L +QA +V + Sbjct: 70 AVELIHMATLVHDDVIDGAEMRRGIPTVHARWGPETAIKVGDVLFAQAIELVSSYEDSAV 129 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ ++ GE Q S + + Y I+ KTA+ AA E+ + + Sbjct: 130 ARKLAATCLSMCTGEFAQERESYSPQQSVWRYFRRIRRKTALFIGAACELGARVCEAPLV 189 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V QAL+ YG+ LG+AFQ+VDDVLD E +GK +G D R G TLPVI A+ R +K+ Sbjct: 190 VCQALRQYGLALGMAFQVVDDVLDLVAEERVLGKVVGGDIRQGIATLPVIYAWSR-SKKG 248 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + GK E +++A I+RE + + A ++ KA LR LP ++ Sbjct: 249 RRLKEILCMRGKSEAE-VQEAIAIVREAGGIGFSLEVARAFAAKALRFLRPLPAIPQRRR 307 Query: 310 LMEVVDFCLQR 320 L ++ +F + R Sbjct: 308 LEQIAEFVITR 318 >gi|299142039|ref|ZP_07035173.1| octylprenyl diphosphate synthase [Prevotella oris C735] gi|298576501|gb|EFI48373.1| octylprenyl diphosphate synthase [Prevotella oris C735] Length = 325 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 105/314 (33%), Positives = 164/314 (52%), Gaps = 8/314 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++E L + + D ++ V+ ++ GGKR+RPML L A A Sbjct: 14 ELEDFISLFNQSLSHDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNFGRVSSVTQHAAVG 73 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +HTA+L+HDDVVD+S+ RRG+ + ++ N+ SVLVGDF+LS A V +T S+ + Sbjct: 74 LELLHTASLVHDDVVDESSERRGQASVNALYDNKVSVLVGDFILSTALLYVSKTHSEVIV 133 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS + TL++GE+ QL+ +N +TE Y +IK KTA LF A + + AG + Sbjct: 134 RYLSELGRTLSDGEILQLTNIQNEAITETAYYEIIKRKTAALFEACAAIGAESAGASHDD 193 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A + +G NLGI FQ+ DD+ DY + E+GK G D GK TLPVI A + E Sbjct: 194 VEAARKFGQNLGIIFQIRDDIFDYY-DSKEIGKPTGNDMLEGKLTLPVIYALKSTENAEM 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP----DSSW 306 + ++ + + +EN + EY + D +R + DS+ Sbjct: 253 MMLARKVKAREVKQSEINQLVAFTKENGGI---EYADQQMWKFHADCMRFIDERVGDSAI 309 Query: 307 KKSLMEVVDFCLQR 320 K +L +DF ++R Sbjct: 310 KTALKAYLDFVIER 323 >gi|242091495|ref|XP_002441580.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor] gi|241946865|gb|EES20010.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor] Length = 406 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 158/289 (54%), Gaps = 11/289 (3%) Query: 40 SGGKRLRPMLTL----ATALM--LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +GGKRLRP L ATA + L H LA IE IHTA+L+HDDV+DDS +RRG Sbjct: 123 AGGKRLRPALVFLVSRATAELAALSELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRG 182 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K ++G + +VL GDF+ +Q+ + ++ E ++ +S V A GE++Q S + Sbjct: 183 KETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFD 242 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 DVT +DYL KTA L +A+ +++ +G+ ++ + + YG NLG++FQ+VDD+LD Sbjct: 243 CDVTLDDYLLKSYYKTASLIAASTRSAAIFSGMDTTICEQMYEYGRNLGLSFQVVDDILD 302 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 + ++GK G D G T PVI A Q ++ + I+ +L A + Sbjct: 303 FTQSAEQLGKPAGSDLAKGNLTAPVIFALQ-----DEPRLREIIDSEFSEPGSLAAAVEL 357 Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 + + + + A G A SL+CLP S ++ +L VV + LQR+ Sbjct: 358 VHRSGGIRRAQELAEEKGALAIQSLQCLPRSEFRSALERVVHYNLQRIQ 406 >gi|297617605|ref|YP_003702764.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297145442|gb|ADI02199.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 322 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 94/310 (30%), Positives = 169/310 (54%), Gaps = 4/310 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +EKV +++ I +++ ++ + +L+ +GGKRLRP L + D + LA A+ Sbjct: 14 LEKVEQELVRAITTEISLLKEASVHLVKAGGKRLRPAFVLLSGSFYSSSLDGLIPLAVAL 73 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H ATL+HDDV+D+S RRG+ + WGN+ S+ G+++L+++ ++ + + ++ Sbjct: 74 ELVHMATLVHDDVIDNSFTRRGQKTVKACWGNRVSLYSGNYILAKSLSLIAAYERPDIID 133 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ V+ + EGE+ Q+ ++ +DYL I+ KTA+L S + + +L+ G Sbjct: 134 ILATVSMKVCEGEIIQMLSCFDVGQGYKDYLRRIERKTALLMSLSCQTGALVGGAPADKV 193 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L+ +G LG+AFQ+ DDVLD+ +GK +G D R G TLP + A + G ++ Sbjct: 194 TVLRRFGYYLGMAFQITDDVLDFVASEEVLGKPVGSDIRQGIITLPALYALREG--KDSQ 251 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSL 310 S + + +N + I M + +D + A SY +KA+ L+ LPD + L Sbjct: 252 LLASILCSPE-RCKNEAEDAIDMVLSSGGIDYALKVACSYAEKARSLLKSLPDVPARNVL 310 Query: 311 MEVVDFCLQR 320 + +F + R Sbjct: 311 DRIAEFVVTR 320 >gi|153007031|ref|YP_001381356.1| polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5] gi|152030604|gb|ABS28372.1| Polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5] Length = 349 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 131/226 (57%), Gaps = 2/226 (0%) Query: 20 LKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 L R D E + ++L+ +GGKR+RPM+TL + V A + E H+AT Sbjct: 46 LTRATEDAEEKLRAAARHLVSAGGKRIRPMVTLLSCGACGGDMRAAVPYAVSAELTHSAT 105 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVA 137 LLHDDV+DD LRRG+ A+R++WGN SVL GD+LL++A +V E AL L Sbjct: 106 LLHDDVIDDGPLRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEPARSAALPPLLATM 165 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L EGE+ QLSL + TE+DYL V+ KTA LF A + AG + +AL + Sbjct: 166 RRLVEGEVLQLSLRSSFSATEKDYLDVVIGKTASLFGWAAAAGAWAAGQVGRIPEALVQF 225 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G +GIAFQLVDD LDY + +GK +G D GK TLP+I A + Sbjct: 226 GEGIGIAFQLVDDALDYAADPQLLGKRLGTDLIEGKATLPLIRACE 271 >gi|313894963|ref|ZP_07828522.1| putative heptaprenyl diphosphate synthase component 2 [Selenomonas sp. oral taxon 137 str. F0430] gi|312976416|gb|EFR41872.1| putative heptaprenyl diphosphate synthase component 2 [Selenomonas sp. oral taxon 137 str. F0430] Length = 325 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 102/322 (31%), Positives = 164/322 (50%), Gaps = 12/322 (3%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---- 61 D+ +D+ + + + SD ++ D+ +L+ SGGKRLRP L +L RG Sbjct: 7 DVIEEDLTVLETALEAALSSDSALVSDIGAHLVSSGGKRLRPAL-----FLLAARGGTAF 61 Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 D + +A A+E IHTA+L+HDDV+D++ RRG WGNQ ++L GD++ ++AF Sbjct: 62 DRDRAMPIAVALELIHTASLVHDDVIDEADTRRGAATTNAKWGNQVAILSGDYIFARAFK 121 Query: 120 MVIETK-SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 V S L+ + CTL+EGE+ Q + V+E+ Y I+ KTA E Sbjct: 122 QVARVGYSWHIYMRLADLVCTLSEGEILQDHTVYQVPVSEDAYYERIRKKTADFLEICCE 181 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + I G+ YG +G+AFQ+ DD+LD + +GK G D G TLPV Sbjct: 182 LGAGIGGMSAEDTANFARYGHAIGMAFQITDDLLDLQQTAERIGKPAGRDLAQGYVTLPV 241 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 I A ++E+ + I + K+S E + +A ++R + + RA Y +AK +L Sbjct: 242 IRALSVLGEKERAELTALITNPKMSEEEVARALNLVRSTDGVDYAQERADDYLTRAKAAL 301 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 D +++ + DF +R Sbjct: 302 PASLDPRIRETCLMAADFIGRR 323 >gi|296120422|ref|YP_003628200.1| trans-hexaprenyltranstransferase [Planctomyces limnophilus DSM 3776] gi|296012762|gb|ADG66001.1| Trans-hexaprenyltranstransferase [Planctomyces limnophilus DSM 3776] Length = 338 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 152/296 (51%), Gaps = 2/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 SD + D++++ GKRLRP+L L +A + H LLA +E IH ATL+HDDV Sbjct: 43 SDQPCVKDILQHATRFRGKRLRPILVLLSARACGEVNETHRLLAAVVEMIHIATLVHDDV 102 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D+++ RR W N+TSVL GD+L + AF + E + A + + EGE Sbjct: 103 LDEASTRRHVATVNARWNNETSVLFGDYLFTHAFHLASELPTSHACRIIGRATNKVCEGE 162 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ NLD+ EE Y +I KTA L + + + + A V A+++YG LG+A Sbjct: 163 LTQIHERGNLDLNEETYFKIINGKTAELTAVSAYLGAHYADQPAEVVNAVEAYGRKLGLA 222 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD+LD G + GK +G D + K TLP+I T + + + + Sbjct: 223 FQIADDLLDILGVEKKTGKTLGSDLKKQKLTLPIIRLLATATSADATIIRELLAHPEDDT 282 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + + ++ AL T A+ ++A + L LP+S + L E+ F ++R Sbjct: 283 AGQLREY--LHKSDALEYTSQTAHKLVEEACEHLNVLPESQARHWLCEIARFSVER 336 >gi|86140643|ref|ZP_01059202.1| polyprenyl synthetase [Leeuwenhoekiella blandensis MED217] gi|85832585|gb|EAQ51034.1| polyprenyl synthetase [Leeuwenhoekiella blandensis MED217] Length = 325 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 167/298 (56%), Gaps = 4/298 (1%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTATLLHD 82 S V ++ + Y++ GK++RPM A ML E D A IE IHTATL+HD Sbjct: 28 SKVPLLNRITHYIVNRKGKQMRPMFVFLVAKMLGDERLNDRTYRGASVIELIHTATLVHD 87 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DVVDDS RRG + +W N+ +VLVGDFLLS+ + I+ + + L+ +S+ ++E Sbjct: 88 DVVDDSYRRRGFFSLNALWKNKIAVLVGDFLLSKGLLLSIDNEDFDLLQIISVAVREMSE 147 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GEL Q+ +++LD+TEE Y +I+ KTA L +A + + +A++ +G +G Sbjct: 148 GELLQIEKARDLDITEEVYFEIIRQKTATLIAACCAMGACAIHASKKDVEAMRKFGELIG 207 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQ+ DD+ DY + ++GK G D + K TLP+I A +++ + +++ + Sbjct: 208 LAFQIKDDLFDYGSQ--KIGKPTGIDIKEQKMTLPLIYAVNNSDDKQRKWLINSVKNHNK 265 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + + ++E+ L + + Q+A L P+S +K++L+ +V++ ++R Sbjct: 266 DKKRVNEVIAYVKESGGLDYAVAKMKALQQEALKILDKYPESKYKEALVLMVNYVIER 323 >gi|255535323|ref|YP_003095694.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium 3519-10] gi|255341519|gb|ACU07632.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium 3519-10] Length = 325 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 159/296 (53%), Gaps = 1/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+V ++ V ++++ + GK++RPM A ++ D A IE IHTATL+HDDV Sbjct: 29 SNVPLLDKVTRFIVTTKGKQMRPMFVFLCAKLVGSVTDKTFRGASMIELIHTATLVHDDV 88 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VD+S RR + +W N+ +VLVGD+LLS+A + + K + L +S +AEGE Sbjct: 89 VDESFKRRNFFSINALWKNKIAVLVGDYLLSKAVLLSTDHKDYDLLAVISRTIREMAEGE 148 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L QL ++ LD+TEE Y +I+ KTA L +A E+ + + +G G+A Sbjct: 149 LLQLEKARKLDITEEVYYEIIRQKTATLIAACCEIGVRSNSDDEVLAAKMMEFGTLTGMA 208 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD+ DY N +GK +G D + K TLP+I + ++++ ++ + I Sbjct: 209 FQIKDDLFDYLTS-NFIGKPVGIDIKEQKMTLPLIYTLKNAAEKDRKYFLNIIRRHNTDT 267 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +K+ ++ + L Y +AK L PDS K+SL ++D+ ++R Sbjct: 268 KRVKELIAFVKSSGGLDYAIGVMKDYQHRAKLILDEFPDSEAKRSLHLMLDYVIER 323 >gi|239908218|ref|YP_002954959.1| octaprenyl-diphosphate synthase [Desulfovibrio magneticus RS-1] gi|239798084|dbj|BAH77073.1| octaprenyl-diphosphate synthase [Desulfovibrio magneticus RS-1] Length = 322 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 85/235 (36%), Positives = 141/235 (60%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M + D+ +++ +N + + M+ VV++++ +GGKRLRP+LT+ TA + YR Sbjct: 1 MSDIADIVSREVPAINRYLESATETLNPMVQPVVRHVLLAGGKRLRPLLTILTARAMGYR 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D+ LAC++EF+H+ATLLHDD++D + LRRG+ +A + +G+ ++L GD LL+ A + Sbjct: 61 ADDVYPLACSLEFLHSATLLHDDILDGAKLRRGRESAHVRFGSTHTILAGDVLLALANRL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + E + LS A GE+ +++ +++D+ + Y +I KTA L A+ + Sbjct: 121 VAEYDNPELTKLLSEALLQTATGEILEIAHLRDVDLPLDTYFSIITGKTAYLIQASCQCG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +++AG + QA G ++G+AFQLVDD LDY GK G D + GK T Sbjct: 181 AVLAGASPRLIQAAADLGHHIGVAFQLVDDALDYTSPATVSGKPTGGDLKEGKVT 235 >gi|27362941|gb|AAN86974.1| multifunctional geranylgeranyl pyrophosphate synthase [Sulfolobus shibatae B12] Length = 331 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 172/315 (54%), Gaps = 10/315 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 VNF I + S+V + + +L +GGKRLRP++ ++++ ++ A A+E + Sbjct: 16 VNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDRQRAYKAAAAVEIL 75 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEAL 130 H TL+HDD++D LRRG + WG ++L GD+L ++AF + E Sbjct: 76 HNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEALNEALKGLDGNTFY 135 Query: 131 EALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A S+ ++ +EG+ +S +DVTEE+Y+ +IK KTA+LFS + + +I Sbjct: 136 KAFSVFINSIEIISEGQAMDMSFENRVDVTEEEYMQMIKGKTAMLFSCSAALGGIINKAS 195 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + + L YG+NLGI+FQ+VDD+L G+ E+GK + D R GK T+ VI T Sbjct: 196 DDIIKNLVEYGLNLGISFQIVDDILGIIGDQKELGKPVYSDIREGKKTILVIKTLSEATD 255 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSS 305 EK ST+ + + ++L++A I+R+ +L A Y A + LR +P + + Sbjct: 256 DEKKILVSTLGNREAKKDDLERASEIIRK-YSLQYAYNLAKKYSDLALEHLRKIPVYNET 314 Query: 306 WKKSLMEVVDFCLQR 320 +K+L + F ++R Sbjct: 315 AEKALKYLAQFTIER 329 >gi|281424797|ref|ZP_06255710.1| octylprenyl diphosphate synthase [Prevotella oris F0302] gi|281401167|gb|EFB31998.1| octylprenyl diphosphate synthase [Prevotella oris F0302] Length = 325 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 105/314 (33%), Positives = 164/314 (52%), Gaps = 8/314 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++E L + + D ++ V+ ++ GGKR+RPML L A A Sbjct: 14 ELEDFISLFNQSLSHDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNFGRVSSVTQHAAVG 73 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +HTA+L+HDDVVD+S+ RRG+ + ++ N+ SVLVGDF+LS A V +T S+ + Sbjct: 74 LELLHTASLVHDDVVDESSERRGQASVNALYDNKVSVLVGDFILSTALLYVSKTHSEVIV 133 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 LS + TL++GE+ QL+ +N +TE Y +IK KTA LF A + + AG + Sbjct: 134 RYLSELGRTLSDGEILQLTNIQNEAITETAYYEIIKRKTAALFEACAAIGAESAGASHDD 193 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A + +G NLGI FQ+ DD+ DY + E+GK G D GK TLPVI A + E Sbjct: 194 VEAARKFGQNLGIIFQIRDDIFDYY-DSKEIGKPTGNDMLEGKLTLPVIHALKSTGNAEM 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP----DSSW 306 + ++ + + +EN + EY + D +R + DS+ Sbjct: 253 MMLARKVKAREVKQSEINQLVAFTKENGGI---EYADQQMWKFHADCMRFIDERVGDSAI 309 Query: 307 KKSLMEVVDFCLQR 320 K +L +DF ++R Sbjct: 310 KTALKAYLDFVIER 323 >gi|270307760|ref|YP_003329818.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp. VS] gi|270153652|gb|ACZ61490.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp. VS] Length = 324 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 7/298 (2%) Query: 28 EMIPDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 + P++ + L I GGK LRP L++ +A+ + LA + E +H ATL+HDD + Sbjct: 31 QSFPEMAEMLDYILVGGKVLRPALSMLSAMCFGAGIKKVLSLATSSEMLHIATLVHDDAI 90 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D + RRG+ VWG + ++L+GDFL + A +T + + + +A GEL Sbjct: 91 DKADTRRGRRTVNSVWGLEKAILLGDFLFAHAAETAADTGNMRIVTLFAQTLQIIASGEL 150 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 +Q S N D + E+YL I KTA LF A + +++A + + ++SYG NLG++F Sbjct: 151 KQAYASFNPDQSYENYLERISGKTAALFVMATKGGAILADASPADEEIMRSYGYNLGLSF 210 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 Q+VDD+LD+ G +MGK +G D NG TLP ++ R E N K + S Sbjct: 211 QIVDDILDFVGNAKDMGKPVGSDLNNGTVTLPALILMDR--YPESNPIKDMLGATDRSAH 268 Query: 266 NLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 K +I + ++D Y+ A Y A L LP ++ +KSL ++ +F ++R N Sbjct: 269 VAKAVEMINSSD--IIDLSYKEAKRYADLACKDLSKLPKTAARKSLYQLAEFIVERKN 324 >gi|223943155|gb|ACN25661.1| unknown [Zea mays] Length = 413 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 163/290 (56%), Gaps = 15/290 (5%) Query: 40 SGGKRLRPMLTL----ATALM--LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +GGKRLRP L ATA + L H LA IE IHTA+L+HDDV+DDS +RRG Sbjct: 130 AGGKRLRPALVFLVSRATAELAGLSELTAEHRRLAEIIEMIHTASLIHDDVIDDSGMRRG 189 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K ++G + +VL GDF+ +Q+ + ++ E ++ +S V A GE++Q S + Sbjct: 190 KETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFD 249 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 D+T +DYL KTA L +A+ + +S+ +GV ++ + + +YG NLG++FQ+VDD+LD Sbjct: 250 CDITLDDYLLKSYYKTASLIAASTKSASIFSGVSTTICEKMYAYGRNLGLSFQVVDDILD 309 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK-REKNFWKSTINDGKIS-VENLKKAF 271 + ++GK D G T PVI A Q + RE I D + S ++L A Sbjct: 310 FTQSAEQLGKPAASDLAKGNLTAPVIFALQSEPELRE-------IIDSEFSDTDSLATAI 362 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++ + + A G A +L+CLP S ++ +L ++V++ L+R+ Sbjct: 363 ELVHRSGGIRRAHELAREKGDLAIQNLQCLPRSDFRSALEKMVEYNLERI 412 >gi|225181669|ref|ZP_03735109.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] gi|225167650|gb|EEG76461.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] Length = 320 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 167/302 (55%), Gaps = 9/302 (2%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + S ++ ++ KYL+ + GKR+RP L + + + H+ +A A+E IH+ATL+HD Sbjct: 22 LTSQEPVVQEINKYLLETPGKRIRPALFFLSLALWKEEPQEHLSVAVALELIHSATLVHD 81 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DVVD S +RRGK + WGN T+VL GD+L ++AF ++ E + ++ +S + ++E Sbjct: 82 DVVDASKVRRGKPSINEAWGNHTAVLTGDYLFARAFELLTEYGNISLIKEMSALVRDMSE 141 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMNL 201 GE++Q + D+ ++YL I KTA F + ++A Q++ AL++YG N+ Sbjct: 142 GEIQQQAQRFCTDLDIKNYLQRIAKKTARFFMVCAKSGGIVARPQDTEAICALENYGYNV 201 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ---RGTKREKNFWKSTIN 258 G+AFQL+DD+LD G + +GK +GED R G TLP++ Q G + I+ Sbjct: 202 GMAFQLIDDLLDVTGNEDTIGKPLGEDLRQGVITLPILHVLQVSPHGREFSAQIASRQID 261 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 D +S + + R A Y A+ Y + A+ +L LP + +++L F + Sbjct: 262 DSLLSTLTTE----MERHGCAEFVKNY-AWQYVKAAQRALEPLPRNPCRQTLDTASRFIV 316 Query: 319 QR 320 +R Sbjct: 317 ER 318 >gi|189218934|ref|YP_001939575.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum V4] gi|189185792|gb|ACD82977.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum V4] Length = 394 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 163/288 (56%), Gaps = 4/288 (1%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D ++P + +Y++ S GKR+RP+L L +A G+NH+ LA +E IH ATL+HDD++ Sbjct: 93 DAGIVP-LFRYVLASEGKRIRPLLVLLSAKGSGGIGENHLYLAVVVEMIHLATLVHDDIL 151 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D +++RRG + WG++ SVL+GD L +QA + + +++++ C + GE+ Sbjct: 152 DGASMRRGIPSVTSRWGSEISVLLGDNLFAQALKVCCRLHP-DIIQSVANGVCVVCSGEI 210 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 Q + ++ EE+YL +I+ KT LF E+++ + +V +AL +G LG ++ Sbjct: 211 LQTRRRFDWNLLEEEYLKIIQMKTGELFRIPCELAARLNSASRTVSEALGRFGQALGSSY 270 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 Q+ DD LD G +GK +G D GK TLP++ +Q+G++ K +G +S + Sbjct: 271 QIYDDCLDLFGSEENVGKTLGTDLGGGKLTLPILYLYQQGSEEIKRTLVEIFENG-VSAD 329 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 K F I++E L T A S+ +K + L LP+S K L++V Sbjct: 330 WKKIQFWIVKEG-ILKKTFQTAMSFLEKGEKELALLPESDEKDCLLDV 376 >gi|194703306|gb|ACF85737.1| unknown [Zea mays] gi|194703680|gb|ACF85924.1| unknown [Zea mays] gi|194704700|gb|ACF86434.1| unknown [Zea mays] gi|223946673|gb|ACN27420.1| unknown [Zea mays] Length = 424 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 163/290 (56%), Gaps = 15/290 (5%) Query: 40 SGGKRLRPMLTL----ATALM--LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +GGKRLRP L ATA + L H LA IE IHTA+L+HDDV+DDS +RRG Sbjct: 141 AGGKRLRPALVFLVSRATAELAGLSELTAEHRRLAEIIEMIHTASLIHDDVIDDSGMRRG 200 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K ++G + +VL GDF+ +Q+ + ++ E ++ +S V A GE++Q S + Sbjct: 201 KETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFD 260 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 D+T +DYL KTA L +A+ + +S+ +GV ++ + + +YG NLG++FQ+VDD+LD Sbjct: 261 CDITLDDYLLKSYYKTASLIAASTKSASIFSGVSTTICEKMYAYGRNLGLSFQVVDDILD 320 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK-REKNFWKSTINDGKIS-VENLKKAF 271 + ++GK D G T PVI A Q + RE I D + S ++L A Sbjct: 321 FTQSAEQLGKPAASDLAKGNLTAPVIFALQSEPELRE-------IIDSEFSDTDSLATAI 373 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++ + + A G A +L+CLP S ++ +L ++V++ L+R+ Sbjct: 374 ELVHRSGGIRRAHELAREKGDLAIQNLQCLPRSDFRSALEKMVEYNLERI 423 >gi|23099243|ref|NP_692709.1| heptaprenyl diphosphate synthase component II [Oceanobacillus iheyensis HTE831] gi|22777472|dbj|BAC13744.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Oceanobacillus iheyensis HTE831] Length = 323 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 93/315 (29%), Positives = 167/315 (53%), Gaps = 9/315 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KDME + + I ++ ++ D L+ +GGKR+RP+ L ++ + Y +A Sbjct: 12 KDMESIESALQDSIQANHPVLRDASTELLHAGGKRIRPVFVLLSSQLGNYDLSKIKKVAV 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IH ATL+HDDV+D++ LRRGK ++GN+ ++ GD++L++A + E Sbjct: 72 TLELIHMATLVHDDVIDEAELRRGKPTTASIYGNRVAMYTGDYILARALEEITEIPDPRV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + LS ++ GE+ Q+ N + DYL IK KTA+L +++ ++ +++ G+ + Sbjct: 132 HQLLSKTLVEVSIGEIEQIEYKFNWEQNFRDYLRRIKRKTALLIASSCKLGAIVGGLNDY 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 L YG +G+++Q++DD+LD+ E+GK G D G TLPV+ A + + Sbjct: 192 QTNKLYQYGYYIGMSYQIIDDILDFTSTSKELGKPAGNDLLQGNITLPVLYAME-----D 246 Query: 250 KNFWKSTIN----DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 K F +S N DG ++ +K ++ A+ + + Y KA +L +P S Sbjct: 247 KTFKQSLFNVFSKDGHVTTNEMKTLIQHLKRTDAIKRSYAVSDMYLSKALTALDEIPASR 306 Query: 306 WKKSLMEVVDFCLQR 320 KK+L ++ + +R Sbjct: 307 AKKTLQDIATYIGKR 321 >gi|212550626|ref|YP_002308943.1| octaprenyl-diphosphate synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548864|dbj|BAG83532.1| octaprenyl-diphosphate synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 328 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 155/288 (53%), Gaps = 1/288 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 ++ +++ GKR+RP++ + +A + + A +E +H ATL+HDDVVD++ LRR Sbjct: 40 MLNFILKKKGKRIRPIILILSAKLCGEPTIKTIEYAVILELLHVATLIHDDVVDNAVLRR 99 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G + +GNQ +VL+GD++LS+A IETK+ L+ L+ +A L EGEL QL S Sbjct: 100 GNPSVMAKFGNQAAVLLGDYILSKAIKQGIETKNFAILQVLTHLAQNLCEGELTQLIFSS 159 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + E Y +I+ KTA+LFS ++ +L + L+ G LGI FQ+ DD+L Sbjct: 160 KKIIDENHYFEIIRKKTAILFSVCSKIGALSVNADVKKNKTLQLIGEYLGICFQIRDDLL 219 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY + ++GK D + GK TLP+I A + K + I S EN+++ Sbjct: 220 DYL-DSEKIGKPTKNDIKEGKITLPLIYALKTAPKAKSKPMMLIIKKQDFSSENVQQLIN 278 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +E + + + + + L P S KKS++ +VD+ ++R Sbjct: 279 FTKEQKGIEYAQEKMLKIKTNIIELLNYFPHSEAKKSMLRLVDYIIER 326 >gi|262153570|ref|ZP_06028698.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1] gi|262030597|gb|EEY49233.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1] Length = 232 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 86/231 (37%), Positives = 131/231 (56%), Gaps = 1/231 (0%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 +RRGK A +GN SVLVGDF+ +++F M+ E S + L+ +S +AEGE++QL Sbjct: 1 MRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLM 60 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + D TE Y+ VI SKTA LF AA ++ +++ V A+++YG LG AFQL+D Sbjct: 61 NCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLID 120 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 DV+DY + +EMGKN+G+D GKPTLP++ A Q G + + I + L + Sbjct: 121 DVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKAN-GMSRLNE 179 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 M + +L T +A KA L LP+S +K++L+ + + R Sbjct: 180 ILAAMEQTGSLQYTIEKALHEADKAIAELAILPESEYKQALITLAHMAVNR 230 >gi|57234813|ref|YP_181134.1| heptaprenyl diphosphate synthase component II [Dehalococcoides ethenogenes 195] gi|57225261|gb|AAW40318.1| heptaprenyl diphosphate synthase component II [Dehalococcoides ethenogenes 195] Length = 324 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 7/298 (2%) Query: 28 EMIPDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 + P++ + L I GGK LRP L++ +A+ + LA + E +H ATL+HDD + Sbjct: 31 QSFPEMAEMLDYILVGGKVLRPALSMLSAMCFGTGIKKVLPLATSSEMLHIATLVHDDAI 90 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D + RR + VWG + ++L+GDFL + A + ET + + + +A GEL Sbjct: 91 DKADTRRSRRTVNSVWGLEKAILLGDFLFAHAAEVAAETDNMRIVTLFAQTLQIIASGEL 150 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 +Q S N D + E+YL I KTA LF A + +++A S + ++SYG NLG++F Sbjct: 151 KQAYASFNPDQSYENYLERISGKTAALFVMATKGGAILADASPSDEEIMRSYGYNLGLSF 210 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 Q+VDD+LD+ G +MGK +G D NG TLP +L R E N K + S Sbjct: 211 QIVDDILDFVGNAKDMGKPVGSDLNNGTVTLPALLLMDR--YPENNPIKDMLGATDRSAH 268 Query: 266 NLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 + +I + ++D Y+ A Y A L LP ++ ++SL ++ +F ++R N Sbjct: 269 VARAVEMINSSD--IIDLSYKEAKRYADLACQDLSKLPKTAARESLYQLAEFIVERKN 324 >gi|220932319|ref|YP_002509227.1| heptaprenyl diphosphate synthase component II [Halothermothrix orenii H 168] gi|219993629|gb|ACL70232.1| heptaprenyl diphosphate synthase component II [Halothermothrix orenii H 168] Length = 326 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 173/309 (55%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +EK++ +I + + V +I + L+ SGGKRLRP+L + +A + ++ + +A AI Sbjct: 18 IEKIDEIIWEITKTRVGLINIATRDLVESGGKRLRPLLVVLSARLGDFDKEKIYHIASAI 77 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H ATL+HDD++D++ +RRG+++A+ +G +V +GDF+LS+AF + S+ +L Sbjct: 78 ELLHMATLVHDDIIDEARIRRGEISAQSKFGKDVAVFLGDFMLSRAFDIFTLYLSRHSLR 137 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ V + EGE+ Q V+ +YL I+ KTA+LF + + + +GV+ Sbjct: 138 KLNKVVGLICEGEIDQYEDKFEYKVSIREYLRRIRRKTALLFGLSTYIGAYESGVRGRNL 197 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + +G+ LG AFQ+ DD+LD+ + E GK IG+D NG LPVI Q R++ Sbjct: 198 SNIYRFGLRLGTAFQIQDDILDFVADPEESGKAIGQDLINGIYNLPVIYLVQDEIFRDR- 256 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + + ++SV ++ ++ ++A+ + Y +K++ + LPD K+ L Sbjct: 257 -AREILGKDRLSVSDVVDIINMVNNSKAINQSRELGKRYIEKSQKYVEHLPDERVKEELN 315 Query: 312 EVVDFCLQR 320 ++ L R Sbjct: 316 FILSLQLNR 324 >gi|168701670|ref|ZP_02733947.1| polyprenyl synthase [Gemmata obscuriglobus UQM 2246] Length = 348 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 147/289 (50%), Gaps = 5/289 (1%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +V++L GKRLRP L L TA H LA A+E IHTATL+HDDV+D++ +RR Sbjct: 62 LVEHLRHYRGKRLRPALLLLTAEACGGVAPAHHTLAAAMEMIHTATLVHDDVLDEADVRR 121 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 R WGN+ S+L+GD L + AF + T A + V + GELRQ++ Sbjct: 122 HAPTFRAGWGNKVSILLGDMLFTHAF-HLTSTVDGRACQITGEVTNRVCAGELRQVTERG 180 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 NL+++E DY VI KTA L + +L AG V + SYG ++G+AFQ+ DD+L Sbjct: 181 NLELSEADYFAVIDGKTAALTECCGRLGALYAGASEEVAAKMASYGRSVGLAFQIADDLL 240 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL-KKAF 271 D G GK +G D K TLPVI R E + I G E L + Sbjct: 241 DLTGTEEAAGKTLGTDLEQQKLTLPVIHCLNRLPAGEAAKLRDLIRAGG---EGLGARVL 297 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + +++ + RA + A+ L CLP + L V ++ ++R Sbjct: 298 QALEKTQSVTYAKRRAEELSRSARQELECLPRGDARSILEAVTEWSIRR 346 >gi|237786435|ref|YP_002907140.1| putative polyprenyl diphosphate synthase [Corynebacterium kroppenstedtii DSM 44385] gi|237759347|gb|ACR18597.1| putative polyprenyl diphosphate synthase [Corynebacterium kroppenstedtii DSM 44385] Length = 355 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 167/312 (53%), Gaps = 4/312 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACA 70 MEK L+++ + + D VK+L +GGKR+RPM L + E G D+ + A Sbjct: 47 MEKCEKLLIRELDQGASFVTDKVKHLALAGGKRVRPMFALLASRYGERPGCDDVIKAAIV 106 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E H ATL HDDV+D++ RRG +A W N ++L GDF+LS A ++ + + + Sbjct: 107 VEMTHLATLYHDDVMDEAEKRRGADSANFRWNNSVAILAGDFILSAA-SRLMASLGVKTV 165 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + S L G++R+ + + D E YL+VI KTAVL +A + ++ AG + Sbjct: 166 KHFSEAFGDLVTGQMRETIGATSGDEIEH-YLNVIHEKTAVLIRSAGFLGAMHAGTPAPI 224 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +QAL ++G +LG+ FQ+VDD++D + +E GK G D R G TLP++ A + G ++E Sbjct: 225 QQALATFGEHLGMVFQIVDDMIDIFSDTSESGKTPGTDLREGVHTLPMLYAME-GDRKEN 283 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + + ++++A ++ A T + + A +L LPD+S +L Sbjct: 284 QRLREMLRSPLSTDADVEEALALIAATDARARTVAKVEEHADAALKALEALPDNSTTNAL 343 Query: 311 MEVVDFCLQRLN 322 ++ F + R+ Sbjct: 344 RALLGFTMARVG 355 >gi|89099139|ref|ZP_01172018.1| HepT [Bacillus sp. NRRL B-14911] gi|89086269|gb|EAR65391.1| HepT [Bacillus sp. NRRL B-14911] Length = 320 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 94/285 (32%), Positives = 156/285 (54%), Gaps = 4/285 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 +L+ +GGKR+RP+ L +A Y +A A+E IH A+L+HDDV+DD+ LRRGK Sbjct: 38 HLLQAGGKRIRPVFVLLSAKFGSYDISEIKKVAVALELIHMASLVHDDVIDDAELRRGKP 97 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + W N+T++ GD++ +++ ++ E + EA E L+ + GE+ Q+ D Sbjct: 98 TIKAKWDNRTAMYTGDYIFAKSLEVMTEIERPEAHEILAKTIVEVCVGEIEQIKDKYRFD 157 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 DYL IK KTA+L +A+ ++ ++ AGV S+ + L +G +G++FQ+ DD+LD+ Sbjct: 158 QNLRDYLLRIKRKTALLIAASCQLGAVAAGVDESIHKKLYKFGYYVGMSFQITDDILDFT 217 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 G E+GK G D G TLPV+ A + R + + D K ++K +++ Sbjct: 218 GTEKELGKPAGGDLLQGNITLPVLFAMEDEDIRREIVKVNETMDRK----EIEKVISLIK 273 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + A+ + + Y KA L LP + KKSL ++ F +R Sbjct: 274 NSGAIERSFTVSNQYLSKALAVLDTLPQNRAKKSLRDIAKFIGKR 318 >gi|114566224|ref|YP_753378.1| trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337159|gb|ABI68007.1| Trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 322 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 95/310 (30%), Positives = 165/310 (53%), Gaps = 2/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +ME + + K++ S +E++ + +LI +GGKRLRP L +A + LA Sbjct: 13 EMELLEQELSKKLDSRIELLNESAVHLIKAGGKRLRPAFALLSAHFYMDDLTEVIPLAVG 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH A+L+HDDV+D+S RRG + WGN+ S+ GDF+ ++A ++ + + Sbjct: 73 LELIHMASLVHDDVIDNSQTRRGTETVKSAWGNRVSIYAGDFIFARALSLIATYERSNVV 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ + + EGE+ Q+ N+ + ++YL I+ KTA+L S + ++ ++IA Sbjct: 133 DVLAEASMKICEGEIIQMMSCYNVKLGLKNYLRRIERKTALLISVSCQLGAMIANAPEQE 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL++YG LG+AFQ+ DD+LD + +GK G D + G TLP + A + +RE+ Sbjct: 193 VRALRNYGYYLGMAFQVTDDILDIIADEQVLGKPTGSDIKQGVITLPTLYALRYSPRREE 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + K I+ + + + Y + +KA+ L LP+ KK+L Sbjct: 253 --LAQLLASPEACRNETGKIIDIIIDTDGIDYSYYITRHFARKAQKQLAFLPELPVKKNL 310 Query: 311 MEVVDFCLQR 320 + DF L R Sbjct: 311 YNIADFILAR 320 >gi|319953718|ref|YP_004164985.1| trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237] gi|319422378|gb|ADV49487.1| Trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237] Length = 325 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 98/325 (30%), Positives = 172/325 (52%), Gaps = 16/325 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE----- 58 +++ +++ME + + S V ++ + Y++ GK++RPM T+ ++ Sbjct: 7 IKEPIIEEMELFEKKFYESMTSKVALLNRITHYIVNRKGKQMRPMFVFLTSKLINNGEVN 66 Query: 59 ---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 YRG A IE IHTATL+HDDVVD+S RRG + +W N+ +VLVGD+LLS Sbjct: 67 ERTYRG------ASVIELIHTATLVHDDVVDESNKRRGFFSINALWKNKIAVLVGDYLLS 120 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 + + I+ + L+ +S+ ++EGEL Q+ ++ LD+TE Y +I+ KTA L +A Sbjct: 121 KGLLLSIDNGDFDLLKIISVAVREMSEGELLQIEKARRLDITEAIYYEIIRQKTATLIAA 180 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + + + + +G G+AFQ+ DD+ DY G+ +GK G D + K T Sbjct: 181 CCSLGACSVKPDSEEVEVFRKFGEYCGMAFQIKDDLFDY-GDA-AIGKPTGIDIKEQKMT 238 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 LP+I +K+EK + ++I + + +K+ +++N L + + +A Sbjct: 239 LPLIYVLNNCSKKEKKWVINSIKNHNKDKKRVKEVINFVKDNGGLEYAVTKMLEFKDQAL 298 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320 L PDS +K SL +V++ + R Sbjct: 299 TILETYPDSDYKNSLQLMVNYVVDR 323 >gi|332827843|gb|EGK00578.1| hypothetical protein HMPREF9455_03221 [Dysgonomonas gadei ATCC BAA-286] Length = 323 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 159/297 (53%), Gaps = 3/297 (1%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C++V I +++ Y++ S GKR+RP+L L A + A +E +HTA+L+HDD Sbjct: 28 CNNVR-IQEIIDYIMKSDGKRIRPILLLLAAKACGEINNTTYNSAITVELLHTASLIHDD 86 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 VVD+S +RRG + ++ N+ +VL GD+ LS A + T + E + +S + LAEG Sbjct: 87 VVDESKIRRGMASLNAIYDNKMAVLAGDYFLSTALIKSVLTGNIEIISRVSDLGRDLAEG 146 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 EL QLSL K L + E++Y VI+ KTA L S + + ++ + + G LG+ Sbjct: 147 ELNQLSLVKELILDEDEYFQVIRKKTASLMSVCMRIGAMSVDASSEEVERFTKLGEYLGV 206 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 FQL DD+ DY + +GK G D R GK TLP++ A + EK S I + Sbjct: 207 CFQLRDDIFDYF--TDAIGKPTGNDIREGKVTLPLLYAISYAPEDEKKELLSVIFSYNYT 264 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 EN+ K +E+ + + Y +A++ + + D+ +++L V++ ++R Sbjct: 265 DENIHKLISYAKEHGGIEYAYRKMEEYKNRAEEIIATVSDTEVREALEAAVEYIVER 321 >gi|298207668|ref|YP_003715847.1| polyprenyl synthetase [Croceibacter atlanticus HTCC2559] gi|83850305|gb|EAP88173.1| polyprenyl synthetase [Croceibacter atlanticus HTCC2559] Length = 311 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + Y++ GK++RPM A M+ YRG A IE I Sbjct: 12 MSSQVALLNRITHYVVNRKGKQMRPMFVFLVAKMVSEGSVNDRTYRG------AAVIELI 65 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDD+VDDS RRG + +W N+ +VLVGD+LLS+ + I+ + L+ +S Sbjct: 66 HTATLVHDDIVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNNDFDLLKIIS 125 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + ++EGEL Q+ ++ LD+TE+ Y +IK KTA L +A + + + + Sbjct: 126 VAVREMSEGELLQIEKARRLDITEDVYYDIIKKKTATLIAACCSLGAASVNPNSDDVTLM 185 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + +G +G+AFQ+ DD+ DY +GK G D + K TLP+I +K +K + Sbjct: 186 RLFGEKIGMAFQIKDDLFDYGNTA--IGKPTGIDIKEQKMTLPLIYTLNTVSKEDKRWLI 243 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL---PDSSWKKSLM 311 +++ + + K ++EN L EY Q K++L L P S +K+SL Sbjct: 244 NSVKNHNKDKARVNKVIEFVKENGGL---EYAVMQMKQFQKEALALLEKFPPSPYKESLE 300 Query: 312 EVVDFCLQR 320 +V++ ++R Sbjct: 301 LMVNYVIER 309 >gi|288800531|ref|ZP_06405989.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 299 str. F0039] gi|288332744|gb|EFC71224.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 299 str. F0039] Length = 325 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 102/297 (34%), Positives = 163/297 (54%), Gaps = 10/297 (3%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V+ ++ GKR+RPML L A + A +E +HTA+L+HDDVVD+S Sbjct: 32 LLSQVLMFIKQRSGKRMRPMLMLLVAKAFGRVSEVTQHAAIGLELLHTASLVHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+ + + N+ +VLVGD++LS A V T S + L+ + TL++GE+ QL Sbjct: 92 GERRGQASVNAFYDNKVAVLVGDYILSTALLHVSFTSSDRIVSGLAELGRTLSDGEILQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV-QNSVRQALKSYGMNLGIAFQL 207 N ++EE Y VIK KTA LF A E+ +L G ++ V QA + +G++LG+AFQ+ Sbjct: 152 ENISNQTISEEAYYEVIKRKTAALFEACTEIGALSVGASKDDVEQA-RLFGLHLGMAFQI 210 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI---LAFQRGTKREKNFWKSTINDGKISV 264 DD+ DY E N++GK G D GK TLPVI LA G ++ + G+++ Sbjct: 211 RDDIFDYY-ESNDIGKPTGNDMAEGKLTLPVIHAVLATDNGAMKD---LALKVKKGEVTP 266 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320 E + + +EN + E + + KA + + D+ K++L +D+ ++R Sbjct: 267 EEVAQLVAFTKENGGIEYAEAKMREFKNKAIGFIEEKIQDTDIKQALNAYLDYVIER 323 >gi|226497916|ref|NP_001149100.1| prenyl transferase [Zea mays] gi|195624736|gb|ACG34198.1| prenyl transferase [Zea mays] Length = 407 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 109/292 (37%), Positives = 157/292 (53%), Gaps = 13/292 (4%) Query: 38 IFS-GGKRLRPMLTL----ATALM--LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 IFS GGKRLRP L ATA + L H LA IE IHTA+L+HDDV+DDS + Sbjct: 120 IFSAGGKRLRPALVFLVSRATAELAALPELTTEHRRLAEIIEMIHTASLIHDDVIDDSGM 179 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRGK ++G + +VL GDF+ +Q+ + ++ E ++ +S V A GE++Q S Sbjct: 180 RRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQAST 239 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + DVT +DYL KTA L +A+ +++ +GV + V + + YG NLG+AFQ+VDD Sbjct: 240 LFDCDVTLDDYLLKSYYKTASLIAASTRSAAIFSGVGSGVCEQMYEYGRNLGLAFQVVDD 299 Query: 211 VLDYRGEVNEMGKN-IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 +LD ++GK G D G T PVILA RE+ + I +L Sbjct: 300 ILDLTQSAEQLGKPAAGSDLAKGNLTAPVILAL-----REEPRLRGIIESEFCEPGSLAA 354 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++ + A G A SL+CLP S ++ +L VV + LQR+ Sbjct: 355 AVELVHRGGGIRSARELAEEKGGLALRSLQCLPRSEFRSALERVVHYNLQRV 406 >gi|305664558|ref|YP_003860845.1| polyprenyl synthetase [Maribacter sp. HTCC2170] gi|88708575|gb|EAR00811.1| polyprenyl synthetase [Maribacter sp. HTCC2170] Length = 325 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 98/325 (30%), Positives = 173/325 (53%), Gaps = 16/325 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE----- 58 ++D ++ME + + S V ++ + Y++ GK++RPM TA +L Sbjct: 7 IKDPVNQEMELFETKFRESMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKLLNNGEVN 66 Query: 59 ---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 YRG A IE IHTA+L+HDDVVD+S RRG + +W N+ +VLVGD+L S Sbjct: 67 ERTYRG------ASIIELIHTASLVHDDVVDESNKRRGFFSINALWKNKIAVLVGDYLFS 120 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 + + ++ + L +S+ ++EGEL Q+ ++ LD+ EE Y +I+ KTA L +A Sbjct: 121 KGLLLSLDNGDFDLLRIISVAVREMSEGELLQIEKARRLDIDEEIYYDIIRQKTATLIAA 180 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + ++ + + +G G+AFQ+ DD+ DY GE ++GK G D + K T Sbjct: 181 CCSMGACSVKPESEEVETFRKFGEFCGMAFQIKDDLFDY-GE-QKIGKPTGIDIKEQKMT 238 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 LP+I +K EK + +++ + + +K+ +++ L E + + + ++A Sbjct: 239 LPLIHVLNICSKSEKKWLINSVKNHNRDKKRVKEVIAFVKDKGGLTYAESKMHEFKKQAL 298 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320 D L P S+++ SL +VD+ + R Sbjct: 299 DLLLSYPKSAYRDSLELMVDYVVDR 323 >gi|311745674|ref|ZP_07719459.1| octaprenyl-diphosphate synthase [Algoriphagus sp. PR1] gi|126575112|gb|EAZ79462.1| octaprenyl-diphosphate synthase [Algoriphagus sp. PR1] Length = 324 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 168/298 (56%), Gaps = 6/298 (2%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S V+++ ++ Y++ GK++RPM TA + ++ A IE +HTATL+HDDV Sbjct: 29 SKVKLLDHIMNYIVKRKGKQMRPMFVFLTAGVCGEINESTHRGAALIELLHTATLVHDDV 88 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VDD+ RRG + +W N+ +VLVGD+LLS+ + ++ + L+ +S ++EGE Sbjct: 89 VDDANYRRGFFSVNALWKNKIAVLVGDYLLSRGLLLSVDNGDFKLLQIVSNAVKEMSEGE 148 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA--ALEVSSLIAGVQNSVRQALKSYGMNLG 202 L Q++ ++ LD+TEE Y +I+ KTA L ++ A+ SS+ ++ V ++ +G +G Sbjct: 149 LLQIAKARKLDITEEVYYQIIRQKTASLIASCCAVGASSVEGNIE--VVSKMQEFGEKVG 206 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQ+ DD+ DY E E+GK +G D + K TLP+I A EK S I + Sbjct: 207 MAFQIKDDLFDYGEE--EIGKPVGIDIKEKKMTLPLIFALNNTDWLEKRRIISLIRNKSD 264 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + + ++++ L + + + Q+A L PDS +K SL ++V + ++R Sbjct: 265 DKKAVNQVITFVKKSGGLEYAKEKMNMFFQEALAILNQFPDSQYKTSLEDLVSYTIER 322 >gi|120434721|ref|YP_860408.1| polyprenyl synthetase [Gramella forsetii KT0803] gi|117576871|emb|CAL65340.1| polyprenyl synthetase [Gramella forsetii KT0803] Length = 325 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 99/331 (29%), Positives = 179/331 (54%), Gaps = 19/331 (5%) Query: 1 MKMLEDLTL---KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 MK++ + L K+M+ + + S V ++ + Y++ GK++RPM A M+ Sbjct: 1 MKVISQIKLPVEKEMDLFEKKFFESMSSKVALLNRITHYIVNRKGKQMRPMFVFLVAKMV 60 Query: 58 E--------YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV 109 YRG A IE IHTATL+HDDVVDDS RRG + +W N+ +VLV Sbjct: 61 SEGSVNERTYRG------ASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLV 114 Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169 GD+LLS+ + I+ + L+ +S+ ++EGEL Q+ ++ LD+TE Y +I+ KT Sbjct: 115 GDYLLSKGLLLSIDNNDFDLLKIISVAVKEMSEGELLQIEKARRLDITEAVYYDIIRQKT 174 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 A L +A + + +++ ++ +G +G+AFQ+ DD+ DY + ++GK G D Sbjct: 175 ATLIAACCSLGAASVKPESNEIAKMRRFGELIGMAFQIKDDLFDYGTQ--KIGKPTGIDI 232 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289 + K TLP+I +++E+N+ +++ + +++ +R+ L R Sbjct: 233 KEQKMTLPLIYVLNNVSEKERNWVINSVKNHNKDRARVREVINFVRDKGGLDYAVSRMKE 292 Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + ++A L P+SS+++SL +V++ ++R Sbjct: 293 FQREALLILEDYPNSSYRESLELMVNYVIER 323 >gi|213962477|ref|ZP_03390739.1| polyprenyl synthetase [Capnocytophaga sputigena Capno] gi|213954803|gb|EEB66123.1| polyprenyl synthetase [Capnocytophaga sputigena Capno] Length = 327 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 165/308 (53%), Gaps = 18/308 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE---------YRGDNHVLLACAIEF 73 + S V ++ + Y++ GK++RPM A ML YRG A IE Sbjct: 26 MSSKVALLNRITYYIVNRKGKQMRPMFVFLVAKMLSDDSKVSERTYRG------ASVIEL 79 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + I+ + L + Sbjct: 80 IHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNGDFDLLRII 139 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL-IAGVQNSVRQ 192 S+ ++EGEL Q+ ++ LD+ E+ Y +I+ KTA L +A + + + Q + + Sbjct: 140 SVAVREMSEGELLQIEKARRLDIVEDVYYEIIRQKTATLIAACCAMGACSVQPEQPELIE 199 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+I T++EK + Sbjct: 200 KMRLFGEYIGMAFQIKDDLFDYTEDA--IGKPTGIDIKEQKMTLPLIYVLNTCTEKEKQW 257 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 +++ + +K+ ++ + L + + QKA + L P SS+K++L Sbjct: 258 LINSVKKYNKDKKRVKEVISFVKTHNGLEYATAKMKEFQQKALNILNDFPASSYKEALTL 317 Query: 313 VVDFCLQR 320 +V++ + R Sbjct: 318 MVNYVIDR 325 >gi|320451263|ref|YP_004203359.1| octaprenyl-diphosphate synthase [Thermus scotoductus SA-01] gi|320151432|gb|ADW22810.1| octaprenyl-diphosphate synthase [Thermus scotoductus SA-01] Length = 314 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 92/222 (41%), Positives = 133/222 (59%), Gaps = 1/222 (0%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I SDV + + + L+ +GGKR+RP L + + + LA A+E +H+ATLLHD Sbjct: 21 IASDVLFVRLIHQDLVTAGGKRIRPRLVFLASRAIGG-APFEMELALAVELLHSATLLHD 79 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 D++DD+ RRGK AA +GN SVL GDFLLS+ ++ +T E +E + VA TL+E Sbjct: 80 DLIDDAETRRGKEAAFRRYGNAVSVLSGDFLLSRLLHVIAKTGRMELVERFAQVAKTLSE 139 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q ++ D + E+Y +I +KTAVL + E +L+ GV VR+AL +G+ G Sbjct: 140 GEVLQFQVAALEDYSLENYERIITAKTAVLMELSTEGPALLKGVDGEVREALARFGLYYG 199 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 AFQ+ DD LD G +GK +G D R GK TL +L +R Sbjct: 200 QAFQMRDDYLDLMGTPEALGKPVGGDVREGKATLITLLLMER 241 >gi|313675096|ref|YP_004053092.1| polyprenyl synthetase [Marivirga tractuosa DSM 4126] gi|312941794|gb|ADR20984.1| Polyprenyl synthetase [Marivirga tractuosa DSM 4126] Length = 324 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 93/302 (30%), Positives = 163/302 (53%), Gaps = 14/302 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALM------LEYRGDNHVLLACAIEFIHTAT 78 S V ++ ++ Y++ GK++RPM +A + YRG A IE +HTAT Sbjct: 29 SKVYLLDKIMGYIVKRKGKQMRPMFVFLSAGVHGQINEATYRG------AALIELLHTAT 82 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L+HDDVVDD+ RRG + +W N+ ++LVGD+LLS+ + I+ + + L+ +S Sbjct: 83 LVHDDVVDDANYRRGFFSINALWKNKIAILVGDYLLSRGLLLSIDNEDFDLLKIVSEAVR 142 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 ++EGEL Q+ ++ L++TE+ Y +IK KTA L ++ V S + + + +K +G Sbjct: 143 EMSEGELLQIEKARKLNITEDIYYDIIKQKTASLIASCCAVGSRSVNKDDDISEKMKLFG 202 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+ DY N++GK +G D + K TLP+I A K E+ I Sbjct: 203 EKVGMAFQIKDDLFDYG--TNDIGKPLGIDIKEKKMTLPLIHALNNADKSEQKQIIKLIK 260 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + +K ++ + E +Y +A ++ P + +++SLM++V + + Sbjct: 261 NKSDKNSTVKTVVDFVKNKNGIAYAEEVMQNYYDEAMTIIKDFPKTEYRQSLMDLVKYTI 320 Query: 319 QR 320 +R Sbjct: 321 ER 322 >gi|84489654|ref|YP_447886.1| IdsA [Methanosphaera stadtmanae DSM 3091] gi|84372973|gb|ABC57243.1| IdsA [Methanosphaera stadtmanae DSM 3091] Length = 327 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 90/294 (30%), Positives = 162/294 (55%), Gaps = 11/294 (3%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +YLI +GGK+ RP LTL + + + + + A AIE HT +L+HDD++D+ RRGK Sbjct: 35 EYLIKAGGKKFRPALTLLSCQAVGGKPEKALKAAAAIELTHTFSLIHDDIMDNDDTRRGK 94 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEALSLVACTLAEGELR 146 A VWG ++L GD L +++F ++ ++ +AL+ L+ + EG+ Sbjct: 95 PAVHKVWGEPLAILAGDSLFAKSFELLSQSAEDNIAYERVVDALQVLTNSCINICEGQAL 154 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 ++ +VT+++Y+++I KT L +A+ + +++ G ++ QAL++YG +G+AFQ Sbjct: 155 DMAFEDTFNVTKDEYMNMIYKKTGDLITASTTIGAIMGGASSNEIQALRTYGKQIGLAFQ 214 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 + DD +D G+ +GK +G D GK TL V+ A ++ K + + + S+ Sbjct: 215 IQDDYIDLTGD-ESIGKPVGSDLVEGKKTLMVVYALEKANKEDHDRLVELLEANDESI-- 271 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +A I+ + A+ +AY ++K +L LPDS K +L ++ DF R Sbjct: 272 IPEAMEILEKYGAINYARSKAYDCVIESKQALSILPDSDAKDALFKLADFVFTR 325 >gi|188995807|ref|YP_001930059.1| putative polyprenyl synthetase [Porphyromonas gingivalis ATCC 33277] gi|188595487|dbj|BAG34462.1| putative polyprenyl synthetase [Porphyromonas gingivalis ATCC 33277] Length = 324 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 101/297 (34%), Positives = 158/297 (53%), Gaps = 3/297 (1%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHTATLLHDD 83 S E + +K L S GK +RP+LT A + + ++ L A + E IHTATL+HDD Sbjct: 28 SQSEWMTKAIKILNGSTGKHVRPLLTGLVAAVCAGKTNSTTLEAAVLLEMIHTATLIHDD 87 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 V+D ++ RRG + N+ +VL+GDF+LS A I + +S + L+EG Sbjct: 88 VIDMASTRRGVPTLNAFFDNRVAVLMGDFVLSSALMRAIALNDIRIITIISQLGRELSEG 147 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 E+RQ + + + E+ Y+ VI+ KTA+LFSA EV ++ + + +K G LG Sbjct: 148 EIRQFETADKVIIDEDIYMGVIRQKTAMLFSACAEVGAITVQAPVEIVEKVKRVGELLGY 207 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQ+ DD+ DY N++GK G D R GK TLP++ A + ++ + ++ S Sbjct: 208 AFQIRDDIFDYYR--NDVGKPTGNDIREGKITLPLLFALKNEQSALRDHCLTILDQKAFS 265 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E+L+ E+ +V E + + KAK L PDS +SL+ + DF +QR Sbjct: 266 EEDLQLLTSFAIEHGGIVYAERKMAEFIDKAKAELAVFPDSDALQSLLALADFIVQR 322 >gi|147669014|ref|YP_001213832.1| polyprenyl synthetase [Dehalococcoides sp. BAV1] gi|289432282|ref|YP_003462155.1| trans-hexaprenyltranstransferase [Dehalococcoides sp. GT] gi|146269962|gb|ABQ16954.1| Polyprenyl synthetase [Dehalococcoides sp. BAV1] gi|288946002|gb|ADC73699.1| Trans-hexaprenyltranstransferase [Dehalococcoides sp. GT] Length = 324 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 103/295 (34%), Positives = 162/295 (54%), Gaps = 7/295 (2%) Query: 31 PDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 P++ + L I GGK LRP L++ +A+ + LA + E +H ATL+HDD +D + Sbjct: 34 PEMAEMLDYILVGGKVLRPALSMLSAMCFGAGIKKVLPLATSSEMLHIATLVHDDAIDKA 93 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+ VWG + ++L+GDFL + A ET + + S +A GEL+Q Sbjct: 94 DTRRGRRTVNAVWGLEKAILLGDFLFAHAAETAAETGNMGIVTLFSQTLQIIASGELKQA 153 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S N D + E+YL I KTA LF A + +++A S + ++SYG NLG++FQ+V Sbjct: 154 YASFNPDQSYENYLERISGKTAALFVMATKGGAILADASPSDEEIMRSYGYNLGLSFQIV 213 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LD+ G +MGK IG D NG TLP +L R + N K +N + ++ Sbjct: 214 DDILDFVGNAKDMGKPIGSDLNNGTVTLPALLLMDR--YPDNNPIKDMLN-ATDRIPHVA 270 Query: 269 KAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA + M + ++D Y+ A Y A +L LP ++ ++SL ++ +F ++R N Sbjct: 271 KA-VEMINSSDIIDLSYKEAKRYADLACRNLSQLPKTAARESLYQLAEFIVERKN 324 >gi|302831696|ref|XP_002947413.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f. nagariensis] gi|300267277|gb|EFJ51461.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f. nagariensis] Length = 389 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 99/317 (31%), Positives = 168/317 (52%), Gaps = 11/317 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR------GDNH 64 DME++N + + + M+ + + +GGK+LRP++ A R D H Sbjct: 77 DMEQMNQNLKNVVGNRHPMLMAAAEQIFGAGGKKLRPVIVFLVAHSTAQREGLTELTDKH 136 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 LA E IHTA+L+HDDV+D+ +RRGK ++G + +VL GDFL +Q+ + Sbjct: 137 RRLAEITEMIHTASLVHDDVLDECDIRRGKKTINSMYGTRVAVLAGDFLFAQSSWFLANL 196 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 + E ++ +S V A GE+ Q + + D+T E YL KTA L +A+ +++ + Sbjct: 197 DNLEVIKLISQVIADFANGEISQAASLFDTDITLEQYLDKSFYKTASLIAASCRSAAVFS 256 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V++A+ SYG +LG+AFQ+VDDVLD+ ++GK G+D +G T P I A ++ Sbjct: 257 DSPVEVKEAMYSYGKHLGLAFQVVDDVLDFTQSTEQLGKPQGQDLASGNLTAPAIFALRK 316 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + + +G +L++A ++RE + + A A +L CLP+ Sbjct: 317 SPELLDIISSEFVEEG-----SLERALELVRETGGIEEARLLARQQADMALAALECLPEG 371 Query: 305 SWKKSLMEVVDFCLQRL 321 ++SL +VD+ L+R+ Sbjct: 372 PSRRSLRLMVDYVLERI 388 >gi|224061363|ref|XP_002300442.1| predicted protein [Populus trichocarpa] gi|222847700|gb|EEE85247.1| predicted protein [Populus trichocarpa] Length = 420 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 173/318 (54%), Gaps = 11/318 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALMLEYR--GDNH 64 D++ +N + + ++ ++ + + +GGKR+RP L ATA ++ + H Sbjct: 108 DLQTLNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEVVGMKELTTEH 167 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +Q+ + Sbjct: 168 RRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLANL 227 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 ++ E ++ +S V A GE++Q S + DV E+YL KTA L +A+ + +++ + Sbjct: 228 ENIEVIKLISQVIKDFASGEIKQASSLFDCDVELEEYLIKSYYKTASLIAASTKGAAIFS 287 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 GV +SV + YG NLG++FQ+VDD+LD+ ++GK G D G T PVI A ++ Sbjct: 288 GVDSSVSMQMYDYGKNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEQ 347 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 K + G I +A +++ + + + A A +LRCLP Sbjct: 348 SPKLREIIESEFCESGSID-----EAIELVKSSGGIERAQELAKEKADLAIQNLRCLPQG 402 Query: 305 SWKKSLMEVVDFCLQRLN 322 S++ +L E+V + L+R++ Sbjct: 403 SYQSALEEMVLYNLERIH 420 >gi|312143242|ref|YP_003994688.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus'] gi|311903893|gb|ADQ14334.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus'] Length = 330 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 87/249 (34%), Positives = 147/249 (59%), Gaps = 1/249 (0%) Query: 3 MLEDLTLKDM-EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 ++ED K++ +K++ I+++ + E+I + LI GGK+LRP L A +Y Sbjct: 2 LIEDRYYKNIVKKLDKNIIEKTTTHREIINSAIVDLIDGGGKKLRPFLMFLAASFGDYDK 61 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + L +IE +H A+LLHDD++DD+ LRRGKV A+ +G +V +GDFL+S+ F ++ Sbjct: 62 KELLDLGSSIEILHMASLLHDDIIDDADLRRGKVTAQKRFGKNEAVFIGDFLISRTFDIL 121 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E +E L ++ + EGE+ Q + +++ DY I+ KTA+LF+ + + + Sbjct: 122 FEYLDKETLIKMNKNLRLICEGEIEQAEKKYDFNISIRDYYRRIRHKTALLFAISSYLGA 181 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++G++ L G+ +G+AFQ+ DD+LD+ GE + GK I +D G TLPVIL Sbjct: 182 YVSGIRGKKLNILYKLGLEIGMAFQIQDDILDFNGEQAKTGKKIAKDLEEGVITLPVILL 241 Query: 242 FQRGTKREK 250 FQ+ ++K Sbjct: 242 FQKEEYQKK 250 >gi|50954065|ref|YP_061353.1| trans-hexaprenyltranstransferase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950547|gb|AAT88248.1| trans-hexaprenyltranstransferase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 353 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 100/302 (33%), Positives = 162/302 (53%), Gaps = 19/302 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +YL+ +GGKR+RPMLTL TA + + + A A+E H A+L HDDV+DDS +RR Sbjct: 55 TTRYLLEAGGKRVRPMLTLLTAQLGKGNTPEVLQAAQAVEITHLASLYHDDVMDDSQMRR 114 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLS 149 G A+ VWGN +VL GD L ++A +V S A+ L A T G+L + Sbjct: 115 GVPTAQFVWGNSVAVLTGDLLFARASKLV----SSLGERAIQLQADTFERLCLGQLHETI 170 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 ++ + Y+ V++ KT L + A ++ + +G +S + + ++G +G+AFQL+D Sbjct: 171 GPQDGEDAVAHYIRVLEDKTGSLIAVAAQMGIVFSGADSSYEEPVVTFGEKIGVAFQLID 230 Query: 210 DVLDYRGE-VNEMGKNIGEDFRNGKPTLPVILAFQRGTKR----------EKNFWKSTIN 258 DV+D E V E GK G D R G TLPV+ +R + +++ ST + Sbjct: 231 DVIDLSSEGVAETGKTPGNDLRAGVATLPVLRLRERALRDPEAAALLDRLDRDVMGSTAD 290 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 DG+++ E A +RE+ T A+ + ++A ++L LP+ KK+L+ D + Sbjct: 291 DGEVTPEA-TAAISALREHEVTRQTLEEAHRWAREAFEALEPLPEGPVKKALVRFADTIV 349 Query: 319 QR 320 +R Sbjct: 350 ER 351 >gi|227831075|ref|YP_002832855.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15] gi|229581383|ref|YP_002839782.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51] gi|238620509|ref|YP_002915335.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4] gi|284998571|ref|YP_003420339.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5] gi|227457523|gb|ACP36210.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15] gi|228012099|gb|ACP47860.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51] gi|238381579|gb|ACR42667.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4] gi|284446467|gb|ADB87969.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5] Length = 331 Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 171/315 (54%), Gaps = 10/315 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 VNF I + S+V + + +L +GGKRLRP++ ++++ ++ A A+E + Sbjct: 16 VNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDRQRAYKAAAAVEIL 75 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEAL 130 H TL+HDD++D LRRG + WG ++L GD+L ++AF + E Sbjct: 76 HNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEALNEALKGLDGDTFY 135 Query: 131 EALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A S+ ++ +EG+ +S +DVTEE+Y+ +IK KTA+LFS + + +I Sbjct: 136 KAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQMIKGKTAMLFSCSAALGGIINKAS 195 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + + L YG+NLGI+FQ+VDD+L G+ E+GK + D R GK T+ VI Sbjct: 196 DDIIKNLVEYGLNLGISFQIVDDILGIIGDEKELGKPVYSDIREGKKTILVIKTLSEAKD 255 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSS 305 EK ST+ + + ++L++A I+R+ +L A Y A + LR +P + + Sbjct: 256 DEKKILVSTLGNREAKKDDLERASEIIRK-YSLQYAYNLAKKYSDLALEHLRKIPVYNET 314 Query: 306 WKKSLMEVVDFCLQR 320 +K+L + F ++R Sbjct: 315 AEKALKYLAQFTIER 329 >gi|332879986|ref|ZP_08447670.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681982|gb|EGJ54895.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 326 Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 165/308 (53%), Gaps = 19/308 (6%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + Y++ GK++RPM A ML YRG A IE I Sbjct: 26 MSSKVALLNRITYYIVNRKGKQMRPMFIFLVAKMLSGGKVTERTYRG------ASVIELI 79 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + I+ + L +S Sbjct: 80 HTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNGDFDLLRIIS 139 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA--ALEVSSLIAGVQNSVRQ 192 + ++EGEL Q+ ++ LD+ EE Y VI+ KTA L +A A+ S++ + + Sbjct: 140 VAVREMSEGELLQMEKARRLDIVEEVYYEVIRQKTATLIAACCAMGACSVMPNAPELI-E 198 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+I T+ EK + Sbjct: 199 KMRLFGEYIGMAFQIKDDLFDYTEDA--IGKPTGIDIKEQKMTLPLIYVLNTCTEEEKKW 256 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 +++ + +K+ ++ + L + + QKA L P S++K+SL+ Sbjct: 257 LINSVKKYNKDKKRVKEVINFVKTHNGLEYATAKMKDFQQKALSLLDEFPASAYKESLIL 316 Query: 313 VVDFCLQR 320 +V++ + R Sbjct: 317 MVNYVINR 324 >gi|323478112|gb|ADX83350.1| Farnesyltranstransferase [Sulfolobus islandicus HVE10/4] Length = 331 Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 171/315 (54%), Gaps = 10/315 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 VNF I + S+V + + +L +GGKRLRP++ ++++ ++ A A+E + Sbjct: 16 VNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDRQRAYKAAAAVEIL 75 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEAL 130 H TL+HDD++D LRRG + WG ++L GD+L ++AF + E Sbjct: 76 HNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEALNEALKGLDGDTFY 135 Query: 131 EALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A S+ ++ +EG+ +S +DVTEE+Y+ +IK KTA+LFS + + +I Sbjct: 136 KAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQMIKGKTAMLFSCSAALGGIINKAS 195 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + + L YG+NLGI+FQ+VDD+L G+ E+GK + D R GK T+ VI Sbjct: 196 DDIIKNLIEYGLNLGISFQIVDDILGIIGDEKELGKPVYSDIREGKKTILVIKTLSEAKD 255 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSS 305 EK ST+ + + ++L++A I+R+ +L A Y A + LR +P + + Sbjct: 256 DEKKILVSTLGNREAKKDDLERASEIIRK-YSLQYAYNLAKKYSDLALEHLRKIPVYNET 314 Query: 306 WKKSLMEVVDFCLQR 320 +K+L + F ++R Sbjct: 315 AEKALKYLAQFTIER 329 >gi|227828317|ref|YP_002830097.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25] gi|229585547|ref|YP_002844049.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27] gi|227460113|gb|ACP38799.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25] gi|228020597|gb|ACP56004.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27] Length = 331 Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 171/315 (54%), Gaps = 10/315 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 VNF I + S+V + + +L +GGKRLRP++ ++++ ++ A A+E + Sbjct: 16 VNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDRQRAYKAAAAVEIL 75 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEAL 130 H TL+HDD++D LRRG + WG ++L GD+L ++AF + E Sbjct: 76 HNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEALNEALKGLDGDTFY 135 Query: 131 EALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A S+ ++ +EG+ +S +DVTEE+Y+ +IK KTA+LFS + + +I Sbjct: 136 KAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQMIKGKTAMLFSCSAALGGIINKAS 195 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + + L YG+NLGI+FQ+VDD+L G+ E+GK + D R GK T+ VI Sbjct: 196 DDIIKNLIEYGLNLGISFQIVDDILGIIGDEKELGKPVYSDIREGKKTILVIKTLSEAKD 255 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSS 305 EK ST+ + + ++L++A I+R+ +L A Y A + LR +P + + Sbjct: 256 DEKKILVSTLGNREAKKDDLERASEIIRK-YSLQYAYNLARKYSDLALEHLRKIPVYNET 314 Query: 306 WKKSLMEVVDFCLQR 320 +K+L + F ++R Sbjct: 315 AEKALKYLAQFTIER 329 >gi|323475387|gb|ADX85993.1| farnesyltranstransferase [Sulfolobus islandicus REY15A] Length = 331 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 171/315 (54%), Gaps = 10/315 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 VNF I + S+V + + +L +GGKRLRP++ ++++ ++ A A+E + Sbjct: 16 VNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDRQRAYKAAAAVEIL 75 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEAL 130 H TL+HDD++D LRRG + WG ++L GD+L ++AF + E Sbjct: 76 HNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEALNEALKGLDGDTFY 135 Query: 131 EALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A S+ ++ +EG+ +S +DVTEE+Y+ +IK KTA+LFS + + +I Sbjct: 136 KAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQMIKGKTAMLFSCSAALGGIINKAS 195 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + + L YG+NLGI+FQ+VDD+L G+ E+GK + D R GK T+ VI Sbjct: 196 DDIIKNLIEYGLNLGISFQIVDDILGIIGDEKELGKPVYSDIREGKKTILVIKTLSEAKD 255 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSS 305 EK ST+ + + ++L++A I+R+ +L A Y A + LR +P + + Sbjct: 256 DEKKILVSTLGNREAKKDDLERASEIIRK-YSLQYAYNLAKKYSDLALEHLRKIPVYNET 314 Query: 306 WKKSLMEVVDFCLQR 320 +K+L + F ++R Sbjct: 315 AEKALKYLAQFTIER 329 >gi|32474678|ref|NP_867672.1| polyprenyl synthase [Rhodopirellula baltica SH 1] gi|32445217|emb|CAD75219.1| polyprenyl synthase [Rhodopirellula baltica SH 1] Length = 397 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 176/327 (53%), Gaps = 18/327 (5%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRG------ 61 ++ + V+ + + + S E + V+++ GGKRLRP +L L+ A M R Sbjct: 72 VESLAAVDARLHRELQSRYEALVPVLRHGTQLGGKRLRPALLLLSGAAMHADRTSKNPLT 131 Query: 62 -------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 ++H+++A +E +HTATL+HDDV+D +A RR W + TS+L+GD+L Sbjct: 132 TEELATTEDHIVMATVVEMVHTATLIHDDVLDKAATRRHVPTINARWNDDTSILLGDYLF 191 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 +Q+F + S A + A + EGELRQ+ LD+ EE YL +I+ KTA L Sbjct: 192 AQSFYLAATLPSTLACRLVGQAAQKVCEGELRQVLGRDWLDIDEETYLDIIRGKTAELTR 251 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + ++ + ++G S +A +G +LGIAFQ+ DD LD G+ +++GK +G D + GK Sbjct: 252 VSCQIGADLSGGDESQVEAFARFGNDLGIAFQIADDFLDLWGDDDDVGKTLGTDLQQGKI 311 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQK 293 TLP+I + + + ++ ++S E+ L + ++R++ A T A SY + Sbjct: 312 TLPLIRLLR---HEDTTVATAALDALRLSPEDRLARVMPLLRKSDAAEYTRKVAESYRRS 368 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A +++ SS +SL + DF + R Sbjct: 369 AIEAISGFAPSSALESLKTIADFAVDR 395 >gi|325003710|ref|ZP_08124822.1| trans-hexaprenyltranstransferase [Pseudonocardia sp. P1] Length = 330 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 99/326 (30%), Positives = 165/326 (50%), Gaps = 17/326 (5%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L + T +++V L+ + + SD E + + +LI +GGKR RP+ TL A + + + Sbjct: 11 LAEATADGLKRVEDLLHREVHSDYEFVTETSLHLIEAGGKRFRPLFTLLAAQVGPHPERD 70 Query: 64 HVLLACAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 V+ A A+ E IH ATL HDDV+D++A+RRG +A W N ++L GDFL + A +V Sbjct: 71 GVITAAAVVELIHLATLYHDDVMDEAAMRRGAESANSRWDNSIAILTGDFLFAHASRLVA 130 Query: 123 ETKSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + +A+ ++A T A+ G++R+ K D E YL V+ KT L + + Sbjct: 131 DLGP----DAVRIIAETFAQLVTGQMRETRGPKPSDDPVEHYLRVVGEKTGSLIATSGRY 186 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + +G +AL +G +G AFQ+ DD++D ++ GK G D R G TLP++ Sbjct: 187 GGMFSGAPTEHIEALHRFGDVIGTAFQISDDIIDIASPADDSGKTPGTDLREGVHTLPML 246 Query: 240 LAFQRG-----TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 A + G +R + + I D + + +A ++R ALV Y +A Sbjct: 247 YALRDGDDSPSARRLRELLAAPITDD----DEVAEALDLLRSGDALVRARETVAGYADRA 302 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320 + L LP +L + D+ ++R Sbjct: 303 RAELAVLPACPAIDALRTLTDYTVER 328 >gi|229579956|ref|YP_002838355.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14] gi|228010671|gb|ACP46433.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14] Length = 331 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 171/315 (54%), Gaps = 10/315 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 VNF I + S+V + + +L +GGKRLRP++ ++++ ++ A A+E + Sbjct: 16 VNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDRQRAYKAAAAVEIL 75 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEAL 130 H TL+HDD++D LRRG + WG ++L GD+L ++AF + E Sbjct: 76 HNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEALNEALKGLDGDTFY 135 Query: 131 EALSLVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A S+ ++ +EG+ +S +DVTEE+Y+ +IK KTA+LFS + + +I Sbjct: 136 KAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQMIKGKTAMLFSCSAALGGIINKAS 195 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + + L YG+NLGI+FQ+VDD+L G+ E+GK + D R GK T+ VI Sbjct: 196 DDIIKNLVEYGLNLGISFQIVDDILGIIGDEKELGKPVYSDIREGKKTILVIKTLSEAKD 255 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSS 305 EK ST+ + + ++L++A I+R+ +L A Y A + LR +P + + Sbjct: 256 DEKKILVSTLGNREAKKDDLERASEIIRK-YSLQYAYNLAKKYSDLALEHLRKIPVCNET 314 Query: 306 WKKSLMEVVDFCLQR 320 +K+L + F ++R Sbjct: 315 AEKALKYLAQFTIER 329 >gi|332312370|gb|EGJ25465.1| Trans-hexaprenyltranstransferase [Listeria monocytogenes str. Scott A] Length = 324 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 109/310 (35%), Positives = 163/310 (52%), Gaps = 13/310 (4%) Query: 10 KDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 KD++ V + K + + E D +L+ +GGKR+RPM +A + + V A Sbjct: 15 KDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPNADFDAVKNA 74 Query: 69 C-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IH A+++HDDVVD++ LRRG+ + WGN ++ GDFL +++ + E K Sbjct: 75 SVAIELIHMASIVHDDVVDNADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDV 134 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G Sbjct: 135 AAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQS 194 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-- 245 + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV A + Sbjct: 195 EADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAMEDPFL 254 Query: 246 TKREKNFWKST-INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 KR + T + + VE +KKA E+ A V Y +KA + L LP Sbjct: 255 KKRISQVTEETPAEEIAVLVEEVKKAGAKQAEDVATV--------YLKKAVEILDSLPQV 306 Query: 305 SWKKSLMEVV 314 K L ++V Sbjct: 307 PELKPLKQIV 316 >gi|160888684|ref|ZP_02069687.1| hypothetical protein BACUNI_01101 [Bacteroides uniformis ATCC 8492] gi|156861998|gb|EDO55429.1| hypothetical protein BACUNI_01101 [Bacteroides uniformis ATCC 8492] Length = 324 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 93/288 (32%), Positives = 153/288 (53%), Gaps = 1/288 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+ ++ GK +RP+L L A + + A A+E +H A+L+HDDVVD+S RR Sbjct: 36 VIAHIRQKNGKMMRPILVLLAAKLFGKVCPATLHAAVALELLHNASLVHDDVVDESTERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VL GD+LL+ A V T++ + ++ +S + LA+GEL QLS Sbjct: 96 GQLSVNAIFNNKVAVLAGDYLLATALVQVGMTRNHDIIDIVSCLGQDLADGELLQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 NL +EE Y VI+ KTAVLF+A + +L G + ++ + +G +G+ FQ+ DD+ Sbjct: 156 NLHFSEEVYFDVIRKKTAVLFAACTKAGALSVGASDEKAESARLFGEYIGLCFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E E+GK G D GK TLP + + I +G+ + + Sbjct: 216 DY-SESKEIGKPTGNDMVEGKLTLPALHVLNTVKDKTAEEIAVKIKNGEATPGEIAHLIE 274 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++N + Y Y +KA L LPD+ K +L +D+ ++R Sbjct: 275 FTKQNGGIEYASQVMYDYKEKALSLLASLPDTEVKAALAGYLDYVVER 322 >gi|46908163|ref|YP_014552.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes serotype 4b str. F2365] gi|254931899|ref|ZP_05265258.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262] gi|46881433|gb|AAT04729.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes serotype 4b str. F2365] gi|293583451|gb|EFF95483.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262] gi|328472773|gb|EGF43622.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes 220] Length = 321 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 154/291 (52%), Gaps = 12/291 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLLHDDVVD 86 E D +L+ +GGKR+RPM +A + + V A AIE IH A+++HDDVVD Sbjct: 31 ETTSDAALHLLEAGGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDVVD 90 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 ++ LRRG+ + WGN ++ GDFL +++ + E K A + LS V L+ GE+ Sbjct: 91 NADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIE 150 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 QL N D + +YL IK KTA+L +A+ + +++G + Q L +G +G+AFQ Sbjct: 151 QLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQ 210 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG--TKREKNFWKST-INDGKIS 263 + DDVLD+ G E+GK GED R G TLPV A + KR + T + + Sbjct: 211 ITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAMEDPFLKKRISQVTEETPAEEIAVL 270 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 VE +KKA E+ A V Y +KA + L LP K L ++V Sbjct: 271 VEEVKKAGAKQAEDVATV--------YLKKAVEILDSLPQVPELKPLKQIV 313 >gi|289192774|ref|YP_003458715.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22] gi|288939224|gb|ADC69979.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22] Length = 317 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 102/297 (34%), Positives = 162/297 (54%), Gaps = 20/297 (6%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDN--HVL-LACAIEFIHTATLLHDDVVDDSALR 91 K+L+F+GGKR+RP LT+ T ++ + DN VL A A+E IH TL+HDD++D+ R Sbjct: 30 KHLLFAGGKRIRPYLTVVTYML---KKDNIREVLPAAAAVELIHNYTLIHDDIMDNDDER 86 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACTLAEGELRQ 147 RGK +V+G ++L GD L ++AF V K+ E L+ LS + EG+ Sbjct: 87 RGKPTVHVVYGEPMAILAGDLLYAKAFEAVSRIKDNKKAHEVLKILSKACVEVCEGQAMD 146 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + N T E+YL +I+ KT L A++E+ +++A R+ALK Y +G+ FQ+ Sbjct: 147 MEFE-NYYPTMEEYLEMIRKKTGALLEASVEIGAVMADCNEEEREALKEYAKRIGLTFQI 205 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DDVLD G+ ++GK +G D R GK T+ VI A + + +K + + I + + Sbjct: 206 QDDVLDLIGDQKKLGKPVGSDIREGKKTIIVIHALKTLDEEKKKRLLEILGNKDIGDKEI 265 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQK---AKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 K+A I++ + EY QK AK+ L+ D +K L ++ DF + R+ Sbjct: 266 KEAIEILKPS-----IEYAKELMKQKTEEAKEYLKIF-DKDRRKVLEDLADFIMSRV 316 >gi|332977217|gb|EGK14013.1| heptaprenyl diphosphate synthase [Desmospora sp. 8437] Length = 323 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 97/314 (30%), Positives = 165/314 (52%), Gaps = 7/314 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D+ +V + K I +D + +L+ +GGKR+RP+ L + EY D +A Sbjct: 12 QDLREVERELEKSIRTDHRDLNRSAAHLLEAGGKRMRPVFVLLSGKFGEYDVDKLKQVAV 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IH ATL+HDDV+DD++ RRG+ + W N+ ++ GD++L ++ +V + + + Sbjct: 72 PLELIHMATLVHDDVIDDASTRRGRPTVKAKWDNRVAMYTGDYILGRSLAIVSQIEDPKI 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 LS + GE+ Q+ D + YLH IK KTA+L S + E+ +L++G + Sbjct: 132 HRVLSPAIYQMCRGEIEQIRDFFATDPSLIRYLHRIKRKTALLMSVSCELGALVSGAAPA 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L+ +G +G+AFQ+ DD+LD G+ +GK G D R G TLPVI ++G + + Sbjct: 192 EVRRLRLFGYFVGMAFQITDDILDLTGDEQTLGKPAGSDLRQGNITLPVIHILKKGPEED 251 Query: 250 KNF---WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + + D K E L++ +R++ + E A Y KA L LP Sbjct: 252 RERILQYLHSRGDAKALPEILRR----VRQSDGIPYAEGLARRYLDKALQVLEGLPAGDT 307 Query: 307 KKSLMEVVDFCLQR 320 ++SL + +F R Sbjct: 308 RESLRLIAEFVAGR 321 >gi|312131592|ref|YP_003998932.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132] gi|311908138|gb|ADQ18579.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132] Length = 324 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 162/306 (52%), Gaps = 14/306 (4%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFI 74 K + + V ++ ++KY+I GK++RPM TA L YRG A IE + Sbjct: 25 KSMKTHVMLLDQIMKYIIHRKGKQIRPMFVFLTAGALGGIKESTYRG------AALIELL 78 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVD++ RRG + +W N+ +VLVGD+LL++ + +E + L+ +S Sbjct: 79 HTATLVHDDVVDEANYRRGFFSVNALWKNKIAVLVGDYLLAKGLLLSVENEDFNLLKIVS 138 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 ++EGEL Q+ ++ LD+TEE Y VI+ KTA L +A V + A + Sbjct: 139 TAVREMSEGELLQIEKARKLDITEEVYYEVIRQKTATLIAACCAVGAASADRTPEEVEKA 198 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + G +G+AFQ+ DD+ D+ +E+GK G D + K TLP+I A + + K Sbjct: 199 RLLGEKIGMAFQIKDDLFDFG--TDEIGKPTGIDIKEKKMTLPLIYALNQSSWGTKRHII 256 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 + I + E + + ++++ L Y +A + ++ P+S +K SL +V Sbjct: 257 NLIKNHSSKPEKVNEVIDFVKQSGGLEYATKVMQGYVDEAFELMKHFPESPYKTSLQGLV 316 Query: 315 DFCLQR 320 F ++R Sbjct: 317 QFTIER 322 >gi|34541591|ref|NP_906070.1| polyprenyl synthetase [Porphyromonas gingivalis W83] gi|34397908|gb|AAQ66969.1| polyprenyl synthetase [Porphyromonas gingivalis W83] Length = 292 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 99/288 (34%), Positives = 155/288 (53%), Gaps = 3/288 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHTATLLHDDVVDDSALRR 92 +K L S GK +RP+LT A + + ++ L A + E IHTATL+HDDV+D ++ RR Sbjct: 5 IKILNGSTGKHVRPLLTGLVAAVCAGKTNSTTLEAAVLLEMIHTATLIHDDVIDMASTRR 64 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G + N+ +VL+GDF+LS A I + +S + L+EGE+RQ + Sbjct: 65 GVPTLNAFFDNRVAVLMGDFVLSSALMRAIALNDIRIITIISRLGRELSEGEIRQFETAD 124 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + + E+ Y+ VI+ KTA+LFSA EV ++ + + +K G LG AFQ+ DD+ Sbjct: 125 KVIIDEDIYMGVIRQKTAMLFSACAEVGAITVQAPVEIVERVKRVGELLGYAFQIRDDIF 184 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY N++GK G D R GK TLP++ A + ++ + ++ S E+L+ Sbjct: 185 DYYR--NDVGKPTGNDIREGKITLPLLFALKNEQSALRDHCLTILDQKAFSEEDLQLLTS 242 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E+ +V E + + KAK L PDS +SL+ + DF +QR Sbjct: 243 FAIEHGGIVYAERKMAEFIDKAKAELAVFPDSDALQSLLALADFIVQR 290 >gi|229543999|ref|ZP_04433058.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans 36D1] gi|229325138|gb|EEN90814.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans 36D1] Length = 320 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 98/323 (30%), Positives = 178/323 (55%), Gaps = 10/323 (3%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ML D+E + + + S+ +I + L+ +GGKR+RP+ L A +Y Sbjct: 3 VQMLYSFLKTDIELIEQELANAVASNAALIQQASESLLKAGGKRIRPVFVLLGAKFGDYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ A Sbjct: 63 IERVKNVAVALELIHMASLVHDDVIDDAELRRGKPTVKAKWDNRIAMYTGDYILATALEY 122 Query: 121 VIETKSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + E L A ++A TL E GE+ Q+ YL IK KTA+L +A+ Sbjct: 123 ITKV---EDLSAHQILADTLVEVCVGEIEQIKDKYRFHQNLRCYLRRIKRKTALLIAASC 179 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ ++ +G ++ + L +G N+G+++Q++DD+LD+ G ++GK GED R G TLP Sbjct: 180 QLGAIASGADENIHRQLYRFGYNVGMSYQIIDDILDFTGTEKQLGKPAGEDLRQGNVTLP 239 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 V+ A + R+K + +++ E L+ +++++ A+ + + Y +KA + Sbjct: 240 VLFAREDPKIRKKLEY---VHEHMPKAE-LEDVVRLVKQSGAIERSYAVSNCYLEKALGT 295 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L LPD+ +KK L ++ + +R Sbjct: 296 LEQLPDTRFKKMLADLARYMGKR 318 >gi|304406942|ref|ZP_07388596.1| heptaprenyl diphosphate synthase component II [Paenibacillus curdlanolyticus YK9] gi|304343929|gb|EFM09769.1| heptaprenyl diphosphate synthase component II [Paenibacillus curdlanolyticus YK9] Length = 325 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 100/324 (30%), Positives = 171/324 (52%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLK---DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 MK++ DL +K D+ ++ + + I SD ++ + +L+ +GGKR+RP+ L + Sbjct: 1 MKLM-DLFVKMKGDLNEIEAELERAITSDHTLMTETSVHLLKAGGKRIRPIFVLLSGKFG 59 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 +YR D +A +E IH A+L+HDDV+D++ RRG++ + W N+ ++ GD++ +A Sbjct: 60 QYRLDVMKNIAVPLELIHMASLVHDDVIDNAETRRGQLTVKSKWDNRIAMYTGDYIHGKA 119 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + + + LS + GE+ Q+ N + + YL I+ KTA+L + + Sbjct: 120 LTVATKLDNPRIHQILSKAMVEMCIGEMEQIRDFFNTEQSVRQYLLRIRRKTALLIAISC 179 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ +L A L +G N+G+AFQ+ DDVLD G ++GK G D R G TLP Sbjct: 180 QLGALAAETDEKYANRLYRFGYNVGMAFQIRDDVLDLCGTEKQIGKPPGSDIRQGNITLP 239 Query: 238 VILAFQRGTKREKNFWK-STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 V+LA + R K + I + + +A ++R + + E A Y QKA Sbjct: 240 VLLALHDTSLRPKLLQEIERIQSADGAAADTSEALRLIRSSNGIKQAEALADRYTQKALT 299 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LPD + KKSL ++ F +R Sbjct: 300 ALEGLPDLAAKKSLKDIARFVNKR 323 >gi|270295030|ref|ZP_06201231.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317478023|ref|ZP_07937205.1| polyprenyl synthetase [Bacteroides sp. 4_1_36] gi|270274277|gb|EFA20138.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316905812|gb|EFV27584.1| polyprenyl synthetase [Bacteroides sp. 4_1_36] Length = 324 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 93/288 (32%), Positives = 153/288 (53%), Gaps = 1/288 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+ ++ GK +RP+L L A + + A A+E +H A+L+HDDVVD+S RR Sbjct: 36 VIAHIRQKNGKMMRPILVLLAAKLFGKVCPATLHAAVALELLHNASLVHDDVVDESTERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VL GD+LL+ A V T++ + ++ +S + LA+GEL QLS Sbjct: 96 GQLSVNAIFNNKVAVLAGDYLLATALVQVGMTRNHDIIDIVSCLGQDLADGELLQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 NL +EE Y VI+ KTAVLF+A + +L G + ++ + +G +G+ FQ+ DD+ Sbjct: 156 NLHFSEEVYFDVIRKKTAVLFAACTKAGALSVGASDEKAESARLFGEYIGLCFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E E+GK G D GK TLP + + I +G+ + + Sbjct: 216 DY-SESKEIGKPTGNDMVEGKLTLPALHVLNTVKDKTAEEIAVKIKNGEATPGEIAHLIE 274 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++N + Y Y +KA L LPD+ K +L +D+ ++R Sbjct: 275 FTKQNGGIEYASQVMYDYKEKALSLLASLPDTEVKVALAGYLDYVVER 322 >gi|297584422|ref|YP_003700202.1| heptaprenyl diphosphate synthase component II [Bacillus selenitireducens MLS10] gi|297142879|gb|ADH99636.1| heptaprenyl diphosphate synthase component II [Bacillus selenitireducens MLS10] Length = 323 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/295 (32%), Positives = 161/295 (54%), Gaps = 8/295 (2%) Query: 31 PDVVK---YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 P +VK +L+ +GGKR+RP+ L +A +Y+ D +A +E IH +L+HDDV+DD Sbjct: 30 PVLVKASSHLLKAGGKRIRPVFVLLSAQFGDYKLDKVKHVAVPLEMIHMGSLVHDDVIDD 89 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 + LRRGK + W N+ ++ GD++ ++A + ++ + + E LS ++ GE+ Q Sbjct: 90 AELRRGKKTIKAEWDNRVAMYTGDYMFAKAIEIASKSGNMKLHEILSDAMVEMSIGEVEQ 149 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + N D YL IK KTA+L S + E+ +LIAG + + LK YG G+AFQ+ Sbjct: 150 IKEQFNPDQHLRIYLRRIKRKTALLISVSCELGALIAGADETTQMKLKRYGYFTGMAFQI 209 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR--GTKREKNFWKSTINDGKISVE 265 DD+LD+ G E+GK G D G TLP + A ++ +R+ + T G + + Sbjct: 210 TDDILDFVGTEKELGKPAGSDLMQGNITLPALYAMRQDESLRRDLVSFMQTKGTGDVDMP 269 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + +++ A+ ++ A Y K L+ LPD K++L E+ ++ +R Sbjct: 270 GIIQR---IKDTGAISYSKEMADRYLDKGMRELKGLPDIRAKRALREIAEYIGRR 321 >gi|327537714|gb|EGF24422.1| Trans-hexaprenyltranstransferase [Rhodopirellula baltica WH47] Length = 326 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 105/328 (32%), Positives = 175/328 (53%), Gaps = 20/328 (6%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRG------ 61 ++ + V+ + + + S E + V+++ GGKRLRP +L L+ A M R Sbjct: 1 MESLAAVDARLHRELQSRYEALVPVLRHGTQLGGKRLRPALLLLSGAAMHADRTSKNPLT 60 Query: 62 -------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 ++H+++A +E +HTATL+HDDV+D +A RR W + TS+L+GD+L Sbjct: 61 TEELATTEDHIVMATVVEMVHTATLIHDDVLDKAATRRHVPTINARWNDDTSILLGDYLF 120 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 +Q+F + S A + A + EGELRQ+ LD+ EE YL +I+ KTA L Sbjct: 121 AQSFYLAATLPSTLACRLVGQAAQKVCEGELRQVLGRDWLDIDEETYLDIIRGKTAELTR 180 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + ++ + ++G S +A +G +LGIAFQ+ DD LD G+ +++GK +G D + GK Sbjct: 181 VSCQIGADLSGGDESQVEAFARFGNDLGIAFQIADDFLDLWGDDDDVGKTLGTDLQQGKI 240 Query: 235 TLPVILAFQRGTKREKNFWKSTINDG-KISVEN-LKKAFIIMRENRALVDTEYRAYSYGQ 292 TLP+I R + E + D ++ E+ L + ++R++ A T A SY + Sbjct: 241 TLPLI----RLLRHEDTAVATAALDALRLPPEDRLARVMPLLRKSDAAEYTRKVAESYRR 296 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A +++ SS +SL + DF + R Sbjct: 297 SAIEAISGFAPSSALESLKTIADFAVDR 324 >gi|328466279|gb|EGF37436.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes 1816] Length = 312 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 108/310 (34%), Positives = 163/310 (52%), Gaps = 13/310 (4%) Query: 10 KDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 KD++ V + K + + E D +L+ +GGKR+RPM +A + + V A Sbjct: 3 KDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPNADFDAVKNA 62 Query: 69 C-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IH A+++HDDVVD++ LRRG+ + WGN ++ GDFL +++ + E K Sbjct: 63 SVAIELIHMASIVHDDVVDNADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDV 122 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G Sbjct: 123 AAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQS 182 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-- 245 + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV A + Sbjct: 183 EADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAMEDPFL 242 Query: 246 TKREKNFWKST-INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 KR + T + + VE +KKA E+ A +Y +KA + L LP Sbjct: 243 KKRISQVTEETPAEEIAVLVEEVKKAGAKQAEDVAT--------AYLKKAVEILDSLPQV 294 Query: 305 SWKKSLMEVV 314 K L ++V Sbjct: 295 PELKPLKQIV 304 >gi|327440778|dbj|BAK17143.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris StLB046] Length = 324 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/322 (28%), Positives = 170/322 (52%), Gaps = 7/322 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +KML D+E + + + + S ++ D +L+ +GGKR+RP+ TL +A +Y Sbjct: 6 IKMLYADIKSDIEVIENELEQALNSSSHLLNDASVHLLQAGGKRIRPVFTLLSAKFGDYN 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D +A +E IH +L+HDDV+D+S +RRG+ + W N+ ++ G+F+ ++A Sbjct: 66 IDRMKNIAVPLELIHMGSLVHDDVIDNSDMRRGRETVKAQWNNRVAMYTGNFIFARALQY 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V ++ A + L+ L GE+ Q+ LD + +DY IK KTA+L ++ E+ Sbjct: 126 VTSIENPRAHQILAKTMVELVNGEVIQIEDKFRLDQSLKDYFRRIKRKTALLIESSCELG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G + LK YG +G++FQ+VDD+LD+ ++GK G D NG TLP++L Sbjct: 186 AVVSGADEKTARHLKRYGYFVGMSFQIVDDILDFTATDKQLGKPAGSDLMNGNVTLPILL 245 Query: 241 AFQRGTKREKNF--WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 K + + + + ++ E + ++R + A+ + + + Y +KA + Sbjct: 246 -----MKDDPQLAPYLTKVAVAGLTEEERQNMLALVRNSEAIKEATHISNLYLKKALKEV 300 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 LP KK L ++ F +R Sbjct: 301 EALPKHPMKKKLRDIALFMGKR 322 >gi|327402252|ref|YP_004343090.1| trans-hexaprenyltranstransferase [Fluviicola taffensis DSM 16823] gi|327317760|gb|AEA42252.1| Trans-hexaprenyltranstransferase [Fluviicola taffensis DSM 16823] Length = 322 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 160/296 (54%), Gaps = 2/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S V ++ + Y+I GK++RPM TA ML + A +E +HTATL+HDDV Sbjct: 27 SKVPLLDKITHYIIRRKGKQMRPMFLFLTAKMLGEVNEKTYQSASLVELLHTATLVHDDV 86 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VDD+ RRG + +W N+ +VLVGD++LS+ +E + AL+ ++ ++EGE Sbjct: 87 VDDANERRGFFSVNALWKNKIAVLVGDYMLSRVLLHSLENDNIRALQIVARAVREMSEGE 146 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ ++ LD+TEE Y VI+ KTA L + E S+ + + + ++++G +G+A Sbjct: 147 LLQIEKARKLDITEEVYFDVIRQKTASLIATVCE-SAAASVDREDMADRMRNFGELVGLA 205 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD+ DY G +GK G D R K TLP+I A Q K + + + Sbjct: 206 FQVKDDIFDY-GTPGNIGKPTGNDIRERKMTLPLIYAMQHSDISVKKELLNIVKNHNEEK 264 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +++A ++ E + R +A L +PDS K++L+ +V++ + R Sbjct: 265 KYVQRAIQLVIEAGGIEYAHNRMIELKTEALSLLNDIPDSESKRALIGLVEYTVTR 320 >gi|37520322|ref|NP_923699.1| solanesyl diphosphate synthase [Gloeobacter violaceus PCC 7421] gi|35211315|dbj|BAC88694.1| solanesyl diphosphate synthase [Gloeobacter violaceus PCC 7421] Length = 325 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 103/293 (35%), Positives = 157/293 (53%), Gaps = 10/293 (3%) Query: 33 VVKYLIFSGGKRLRPMLTL----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++L +GGKR+RP L L ATA E + H LA E IHTA+L+HDDV+D S Sbjct: 38 AAEHLFNAGGKRIRPALVLLVSRATAAYGE-PTERHRRLAEITEMIHTASLVHDDVIDTS 96 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 A+RRG +GN+ +VL GD+L A + S E +E L +V EGEL Q Sbjct: 97 AVRRGIDTVNSRFGNRVAVLAGDYLFGMASAYLARLGSLEVVELLGIVISHFGEGELLQS 156 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 +L + D+T E Y+ KTA L + +++++ +V +AL YG +LGIAFQ++ Sbjct: 157 TLQFDSDLTFEQYIDKSFYKTASLMAGTSRAAAVLSESPAAVCEALYEYGRHLGIAFQVI 216 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LD+ G ++GK G D R+G T PV+ A + + G +L+ Sbjct: 217 DDLLDFTGSTAKLGKPAGSDLRDGNLTAPVLYALEESPHLSGLIERQFEQKG-----DLE 271 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 KA ++ +RAL T A ++ ++A SL L S +++L ++V + RL Sbjct: 272 KALSLIHASRALERTRELAETHARRAVTSLDTLSPSPAREALKDLVGHTVSRL 324 >gi|313680555|ref|YP_004058294.1| polyprenyl synthetase [Oceanithermus profundus DSM 14977] gi|313153270|gb|ADR37121.1| Polyprenyl synthetase [Oceanithermus profundus DSM 14977] Length = 319 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 127/213 (59%), Gaps = 3/213 (1%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDD 83 SDVE I + LI +GGKR+RP L L + L G H + LA A+E +H+ATLLHDD Sbjct: 27 SDVEFIQLIEDDLIAAGGKRIRPRLALLASRALG--GVPHEMELALAVELLHSATLLHDD 84 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 +VDD+ RRG+ AA +GN SVL GD+LLS+ ++ ET E + + A LAEG Sbjct: 85 LVDDAETRRGREAAFRKYGNAVSVLSGDYLLSRVLFLLAETGRIELVHLFAEAARQLAEG 144 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 E+ Q + + +E Y +I+SKTA L AA E ++L+ ++R AL +YG G+ Sbjct: 145 EVLQFQAAAYQEYSEAQYYRIIESKTAALMRAATEGAALLGRAPETLRMALVTYGREYGM 204 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 AFQ+ DD LD G +GK +G D R GK TL Sbjct: 205 AFQMRDDYLDLMGASERLGKPVGGDVREGKVTL 237 >gi|47094453|ref|ZP_00232133.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes str. 4b H7858] gi|226224534|ref|YP_002758641.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes Clip81459] gi|254825575|ref|ZP_05230576.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL J1-194] gi|254852833|ref|ZP_05242181.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL R2-503] gi|254993471|ref|ZP_05275661.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes FSL J2-064] gi|255521040|ref|ZP_05388277.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes FSL J1-175] gi|300763760|ref|ZP_07073757.1| heptaprenyl diphosphate syntase component II [Listeria monocytogenes FSL N1-017] gi|47017168|gb|EAL08021.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes str. 4b H7858] gi|225876996|emb|CAS05705.1| Putative heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606162|gb|EEW18770.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL R2-503] gi|293594818|gb|EFG02579.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL J1-194] gi|300515496|gb|EFK42546.1| heptaprenyl diphosphate syntase component II [Listeria monocytogenes FSL N1-017] Length = 321 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 108/310 (34%), Positives = 163/310 (52%), Gaps = 13/310 (4%) Query: 10 KDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 KD++ V + K + + E D +L+ +GGKR+RPM +A + + V A Sbjct: 12 KDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPNADFDAVKNA 71 Query: 69 C-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IH A+++HDDVVD++ LRRG+ + WGN ++ GDFL +++ + E K Sbjct: 72 SVAIELIHMASIVHDDVVDNADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDV 131 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G Sbjct: 132 AAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQS 191 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-- 245 + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV A + Sbjct: 192 EADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAMEDPFL 251 Query: 246 TKREKNFWKST-INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 KR + T + + VE +KKA E+ A +Y +KA + L LP Sbjct: 252 KKRISQVTEETPAEEIAVLVEEVKKAGAKQAEDVAT--------AYLKKAVEILDSLPQV 303 Query: 305 SWKKSLMEVV 314 K L ++V Sbjct: 304 PELKPLKQIV 313 >gi|256820910|ref|YP_003142189.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271] gi|256582493|gb|ACU93628.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271] Length = 326 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 95/307 (30%), Positives = 164/307 (53%), Gaps = 17/307 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + Y++ GK++RPM A M+ YRG A IE I Sbjct: 26 MSSKVALLNRITYYIVNRKGKQMRPMFVFLVAKMVSGGKVSERTYRG------ASVIELI 79 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + I+ + L +S Sbjct: 80 HTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNGDFDLLRIIS 139 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL-IAGVQNSVRQA 193 + ++EGEL Q+ ++ LD+ EE Y +I+ KTA L +A + + + Q + + Sbjct: 140 VAVREMSEGELLQIEKARRLDIVEEVYYEIIRQKTATLIAACCAMGACSVQPEQTELIEK 199 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+I ++ EK + Sbjct: 200 MRLFGEYIGMAFQIKDDLFDYTEDA--IGKPTGIDIKEQKMTLPLIYVLNTCSEEEKQWL 257 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 +++ + +K+ ++ ++ L + + QKA + L P S +K++L + Sbjct: 258 INSVKKYNKDKKRVKEVIEFVKNHKGLEYATTKMKEFQQKALNILDEFPTSPYKEALTLM 317 Query: 314 VDFCLQR 320 V++ + R Sbjct: 318 VNYVIDR 324 >gi|325106523|ref|YP_004276177.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145] gi|324975371|gb|ADY54355.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145] Length = 323 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 92/296 (31%), Positives = 157/296 (53%), Gaps = 2/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S V ++ + Y++ GK++RPM +A + ++ A +E +HTATL+HDDV Sbjct: 28 SSVPLLDRITHYIVKRKGKQIRPMFVFFSANISGGITESTYHAATFVELLHTATLVHDDV 87 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VD+S RRG + +W N+ +VLVGD+LL++ + ++ + + L+ +S L+EGE Sbjct: 88 VDNSFERRGFFSVNALWKNKIAVLVGDYLLAKGLLLSVDHQEFKQLKIVSDAVQQLSEGE 147 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ + +D++EE Y VI+ KTA L ++ S AG + + + + +G +GIA Sbjct: 148 LLQMEKVRRMDISEEVYYEVIRKKTASLIASCCAAGSTSAGATDEIVKKMHDFGEKIGIA 207 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD+ D+ +++GK G D + K TLP+I A K EK K+ + + Sbjct: 208 FQIKDDLFDFG--TDDIGKPKGIDIKEKKVTLPLIYALNNVDKAEKKRIKNLVKNHNDEP 265 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E + ++ N L E + + Y +A L P+S + L +V F +R Sbjct: 266 EKINAIIEFVKANGGLAYAEEQMFKYQDEAFKILAQFPESESRTGLENLVRFTTER 321 >gi|302521213|ref|ZP_07273555.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. SPB78] gi|302430108|gb|EFL01924.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. SPB78] Length = 336 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 158/307 (51%), Gaps = 4/307 (1%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L S V I + ++L+ +GGKR RP+L + A + V A +E H AT Sbjct: 31 LLDATKSGVPFITEAAQHLVLAGGKRFRPLLVMLAAQFGDPEAPGIVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A W N +VL GDFL S+A ++ EA+ + Sbjct: 91 LYHDDVMDEATVRRGVDSANARWDNSVAVLTGDFLFSRA-SQILAGLGPEAVRIQAEAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + A ++++G + V + L YG Sbjct: 150 RLVTGQILETAGPRDGRDPVDHYLDVLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR--EKNFWKST 256 LG+AFQL DDVLD + +E GK G D R G TLPV+ +R ++ ++ T Sbjct: 210 ERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRLRERIARQGLAEDVALDT 269 Query: 257 INDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + G ++ + L +A +MR + AL A Y A+ +L+ LPD+ + SL ++ D Sbjct: 270 LLRGDLTDDARLAEAVALMRAHPALAQASEDAARYAHDARATLQALPDTPARTSLADLCD 329 Query: 316 FCLQRLN 322 + R+ Sbjct: 330 AVVHRVG 336 >gi|149183310|ref|ZP_01861750.1| HepT [Bacillus sp. SG-1] gi|148848968|gb|EDL63178.1| HepT [Bacillus sp. SG-1] Length = 320 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 24/295 (8%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 +L+ +GGKR+RP+ L +A +Y ++ +A A+E IH+A+L+HDDV+DD+ LRRGK Sbjct: 38 HLLSAGGKRIRPVFVLLSAKFGDYNINSIKNVAVALELIHSASLVHDDVIDDADLRRGKP 97 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + W N+T++ GD++ +++ + + +++A + LS L GE+ Q+ + Sbjct: 98 TIKSQWDNKTAMYTGDYIFARSLEYMTKIDNEDAHKILSNAIVELTVGEIEQIKDKYRFE 157 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 +DYL IK KTA+L + + ++ ++ AG + + L +G N+G++FQ+ DD+LD+ Sbjct: 158 QDLKDYLRRIKRKTALLIAVSCQLGAIAAGAPPEIHKKLYRFGYNVGMSFQITDDILDFT 217 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK----------NFWKSTINDGKISVE 265 E+GK G D G TLPV+ A ++ REK ++ K+ I D Sbjct: 218 ASEEELGKPAGSDLLQGNITLPVLFAMEQRDLREKLIKIEEEVDRDYLKAVIED------ 271 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ A+ + + Y +KA L LP + K+L ++ +F +R Sbjct: 272 --------IKSCGAIEQSHEISARYLKKAMKELEGLPKNGANKTLKDIANFIGKR 318 >gi|333025098|ref|ZP_08453162.1| putative heptaprenyl diphosphate synthase component II [Streptomyces sp. Tu6071] gi|332744950|gb|EGJ75391.1| putative heptaprenyl diphosphate synthase component II [Streptomyces sp. Tu6071] Length = 326 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 158/307 (51%), Gaps = 4/307 (1%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L S V I + ++L+ +GGKR RP+L + A + V A +E H AT Sbjct: 21 LLDATKSGVPFITEAAQHLVLAGGKRFRPLLVMLAAQFGDPEAPGIVPSAVVVELTHLAT 80 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A W N +VL GDFL S+A ++ EA+ + Sbjct: 81 LYHDDVMDEATVRRGVDSANARWDNSVAVLTGDFLFSRA-SQILAGLGPEAVRIQAEAFE 139 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + A ++++G + V + L YG Sbjct: 140 RLVTGQILETAGPRDGRDPVDHYLDVLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYG 199 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR--EKNFWKST 256 LG+AFQL DDVLD + +E GK G D R G TLPV+ +R ++ ++ T Sbjct: 200 ERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRLRERIARQGLAEDVALDT 259 Query: 257 INDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + G ++ + L +A +MR + AL A Y A+ +L+ LPD+ + SL ++ D Sbjct: 260 LLRGDLTDDARLAEAVALMRAHPALAQASEDAARYAHDARATLQALPDTPARTSLADLCD 319 Query: 316 FCLQRLN 322 + R+ Sbjct: 320 AVVHRVG 326 >gi|302390267|ref|YP_003826088.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646] gi|302200895|gb|ADL08465.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646] Length = 323 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 168/306 (54%), Gaps = 9/306 (2%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L I ++ + + ++ I +GGKR+RP L +A Y + LA A+E +HTAT Sbjct: 21 LLSSIKTNEPFLSEPLERTIKAGGKRIRPALVYLSARFGNYDYEKIKPLAVAVELVHTAT 80 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L+HDD+VDDS LRRG + G +V GD++L++ F ++++ + L+++S V Sbjct: 81 LIHDDIVDDSPLRRGISTVQAAIGKDAAVYAGDYVLARTFKILVDHGDFDILKSVSSVLY 140 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + EGE+RQ + ++ ++ DY I+ KTA+LF+ + E+ + A ALK YG Sbjct: 141 RVCEGEVRQKREAFDITISFLDYARRIRKKTALLFALSCELGARGAKADPRTISALKKYG 200 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK----REKNFWK 254 + LG+AFQ++DD+LD + + GK G D + G TLP++ A + RE K Sbjct: 201 ILLGMAFQVMDDILDLTEDESRSGKPRGNDIKEGVITLPLLYALNNQSTALELRELLSDK 260 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 I+D IS I++E+ + + A Y +K+K++L L DS + SLM + Sbjct: 261 HRIDDSTIST-----IIEIVKESGGIEYARHIAGRYVEKSKENLLVLEDSPARSSLMLLA 315 Query: 315 DFCLQR 320 D+ + R Sbjct: 316 DYVVDR 321 >gi|318057825|ref|ZP_07976548.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG] gi|318080208|ref|ZP_07987540.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF] Length = 306 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 158/307 (51%), Gaps = 4/307 (1%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L S V I + ++L+ +GGKR RP+L + A + V A +E H AT Sbjct: 1 MLDATKSGVPFITEAAQHLVLAGGKRFRPLLVMLAAQFGDPEAPGIVPSAVVVELTHLAT 60 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A W N +VL GDFL S+A ++ EA+ + Sbjct: 61 LYHDDVMDEATVRRGVDSANARWDNSVAVLTGDFLFSRA-SQILAGLGPEAVRIQAEAFE 119 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + A ++++G + V + L YG Sbjct: 120 RLVTGQILETAGPRDGRDPVDHYLDVLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYG 179 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR--EKNFWKST 256 LG+AFQL DDVLD + +E GK G D R G TLPV+ +R ++ ++ T Sbjct: 180 ERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRLRERIARQGLAEDVALDT 239 Query: 257 INDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + G ++ + L +A +MR + AL A Y A+ +L+ LPD+ + SL ++ D Sbjct: 240 LLRGDLTDDARLAEAVALMRAHPALAQASEDAARYAHDARATLQALPDTPARTSLADLCD 299 Query: 316 FCLQRLN 322 + R+ Sbjct: 300 AVVHRVG 306 >gi|329960631|ref|ZP_08298974.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057] gi|328532504|gb|EGF59298.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057] Length = 324 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 154/288 (53%), Gaps = 1/288 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+ ++ GK +RPML L A + + A A+E +H A+L+HDDVVD+S RR Sbjct: 36 VIAHIRQKNGKMMRPMLVLLAAKLYGEVCPATLHAAVALELLHNASLVHDDVVDESTERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VL GD+LL+ + V T++ ++ +S + LAEGEL QLS Sbjct: 96 GQLSVNAIFNNKVAVLSGDYLLATSLVQVGLTRNHAIIDIVSCLGQDLAEGELLQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 NL +E+ Y VI+ KTAVLF+A + +L G + + + +G +G+ FQ+ DD+ Sbjct: 156 NLQFSEDVYFDVIRKKTAVLFAACTKAGALSVGADDEKVEFARLFGEYIGLCFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E E+GK G D GK TLPV+ A + I +G+ S + + Sbjct: 216 DYF-ESKEIGKPTGNDMMEGKLTLPVLYALNSTADKAAEKIALKIKNGEASSDEIAHLIE 274 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + N + +++ +KA L +PDS K +L +D+ ++R Sbjct: 275 FTKLNGGIEYANETMFAFREKALSLLASIPDSDVKTALAVYLDYVVER 322 >gi|323489688|ref|ZP_08094915.1| heptaprenyl diphosphate synthase component II [Planococcus donghaensis MPA1U2] gi|323396819|gb|EGA89638.1| heptaprenyl diphosphate synthase component II [Planococcus donghaensis MPA1U2] Length = 324 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 93/292 (31%), Positives = 151/292 (51%), Gaps = 3/292 (1%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ D +L+ +GGKR+RP+ L Y D +A +E IH A+L+HDDV+DDS Sbjct: 34 LLNDASLHLLQAGGKRIRPVFVLLAGKFGNYNVDVMKQVAVPLELIHMASLVHDDVIDDS 93 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 +RRG+ + W N ++ GDF+L++A + E +S E LS + GE+ Q+ Sbjct: 94 EIRRGQPTVKAQWNNSVAMYTGDFILARALEHITEIESPRVHEILSKTLIEVCRGEIIQI 153 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 LD DY IK KTA+L S++ E+ +L++G L+ +G +G++FQ++ Sbjct: 154 QDKYRLDQNLRDYFRRIKRKTALLISSSCELGALVSGTDEKTAAHLRRFGYFIGMSFQII 213 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LD+ E+GK G DF G TLP++ A R K+ +N +S E Sbjct: 214 DDILDFTSTDEELGKPAGSDFIQGNITLPILCA--RKDPELYAMLKANLNK-DLSNEERF 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 K +R + + + + + Y QKA L LP K++ ++ F +R Sbjct: 271 KVVEAIRNSSGIEEAKAMSERYLQKALRELSFLPKGQGVKTMRKIAFFIGKR 322 >gi|298244906|ref|ZP_06968712.1| Trans-hexaprenyltranstransferase [Ktedonobacter racemifer DSM 44963] gi|297552387|gb|EFH86252.1| Trans-hexaprenyltranstransferase [Ktedonobacter racemifer DSM 44963] Length = 329 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 91/311 (29%), Positives = 166/311 (53%), Gaps = 1/311 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D++ V+ +R S + ++ + + + GKRLR LTL + YR + +LL+ A Sbjct: 17 DLDTVDKTFQERATSGLTILNSASMHALGAPGKRLRTALTLLAGKLNTYRFEKLLLLSVA 76 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 E H ATL+HDD+VD+S+ RRG ++G++ ++L+GD+ ++ ++ + + Sbjct: 77 FEMTHLATLIHDDIVDESSTRRGNPTVNALFGDKIAILLGDYYFAKTAGLIADIEDPRID 136 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 S T+ EG + ++ + N+D+++E Y +SKTA L +A + ++I+G Sbjct: 137 HLFSDTVATVCEGTILEMMTAGNIDLSKETYYEKTRSKTACLMAACSKGGAIISGATPEE 196 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR-E 249 + L +YGM+LG AFQ++DD+LDY + + +GK G D R G TLP+I A Q + Sbjct: 197 IELLYAYGMHLGTAFQIIDDILDYTQDQSTIGKPAGNDLRQGMVTLPLIYALQDAPQNGH 256 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 K+ + + E + + + + + + A++ KA+++L P S + Sbjct: 257 YQQVKTLLGEKTHKDEEISEIVEWVTQGNGVKLSLLDAHAQANKAREALYHFPASPDRDV 316 Query: 310 LMEVVDFCLQR 320 L E++DF L R Sbjct: 317 LDELIDFVLMR 327 >gi|110589268|gb|ABG77143.1| trans-hexaprenyltranstransferase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 168 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 82/166 (49%), Positives = 106/166 (63%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I + Y++ SGGKRLRPML L A +Y+G H+ LA IEFIHTATLLHDDVVD S Sbjct: 2 LINQIGAYIVNSGGKRLRPMLVLLAARACDYQGKRHINLAAIIEFIHTATLLHDDVVDGS 61 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRR + A VWGN+ SVLVGDFL S++F M++ + ++ LS +AEGE+ QL Sbjct: 62 ELRRNQETANAVWGNEASVLVGDFLYSRSFEMMVAVEQMRVMDILSHATNRIAEGEVLQL 121 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 N + +E DY+ VIK KTA LF A + +I+GV QAL Sbjct: 122 LNVHNPETSEADYMEVIKRKTATLFEAGTRLGGVISGVDPQQEQAL 167 >gi|315224101|ref|ZP_07865941.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287] gi|314945834|gb|EFS97843.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287] Length = 326 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 95/307 (30%), Positives = 164/307 (53%), Gaps = 17/307 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE--------YRGDNHVLLACAIEFI 74 + S V ++ + Y++ GK++RPM A M+ YRG A IE I Sbjct: 26 MSSKVALLNRITYYIVNRKGKQMRPMFVFLVAKMVSGGKVSERTYRG------ASVIELI 79 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + I+ + L +S Sbjct: 80 HTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNGDFDLLRIIS 139 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL-IAGVQNSVRQA 193 + ++EGEL Q+ ++ LD+ EE Y +I+ KTA L +A + + + Q + + Sbjct: 140 VAVREMSEGELLQIEKARRLDIVEEVYYEIIRQKTATLIAACCAMGACSVQPEQTELIEK 199 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+I ++ EK + Sbjct: 200 MRLFGEYIGMAFQIKDDLFDYTEDA--IGKPTGIDIKEQKMTLPLIYVLNTCSEEEKQWL 257 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 +++ + +K+ ++ ++ L + + QKA + L P S +K++L + Sbjct: 258 INSVKKYNKDKKRVKEVIEFVKNHKGLEYATTKMKEFQQKALNILDEFPVSPYKEALTLM 317 Query: 314 VDFCLQR 320 V++ + R Sbjct: 318 VNYVIDR 324 >gi|329938314|ref|ZP_08287765.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus M045] gi|329302803|gb|EGG46693.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus M045] Length = 336 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 157/305 (51%), Gaps = 4/305 (1%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ S+V I + ++L+ +GGKR RP+L + A + V A +E H AT Sbjct: 31 LLEATKSEVAFITEAAQHLVRAGGKRFRPLLVMLAAQFGDPYAPGIVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A WGN +VL GDFL S+A M+ + EA+ + Sbjct: 91 LYHDDVMDEAEVRRGVDSANTRWGNSVAVLTGDFLFSRASHMLADL-GPEAVRIQAEAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ E YL V+ KT L + A ++++G +V L YG Sbjct: 150 RLVTGQILETAGPRDGRDPVEHYLDVLAGKTGSLVAVACRFGAMMSGADETVVDVLTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK--REKNFWKST 256 LG+AFQL DDVLD + E GK G D R G PTLPV+ +R + + Sbjct: 210 ERLGVAFQLADDVLDIASDSRESGKTPGTDLREGIPTLPVLRLRERAERLGLPADVALCE 269 Query: 257 INDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + D ++ + L +A +RE+ AL Y + A+ +L LP+ + KK+L E+ + Sbjct: 270 LLDSDLAEDARLAEALERLREHPALEQARRDTVRYAEDARSALAPLPECAAKKALTEMCE 329 Query: 316 FCLQR 320 + R Sbjct: 330 LVVHR 334 >gi|255038819|ref|YP_003089440.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053] gi|254951575|gb|ACT96275.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053] Length = 326 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 161/296 (54%), Gaps = 2/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+V ++ ++ Y++ GK+LRPM +A + ++ IE +HTATL+HDDV Sbjct: 31 SEVMLLDQIMNYIVRRKGKQLRPMFVFLSAGVCGNISESTYRGGAMIELLHTATLVHDDV 90 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VDDS RRG + +W N+ +VLVGD+LLS+ + ++ + + L+ +S L+EGE Sbjct: 91 VDDSNYRRGFFSVNALWKNKIAVLVGDYLLSRGLLLSVDHEEFKILKIVSTAVRELSEGE 150 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ ++ LD+ EE Y +I+ KTA L ++ V + G V + ++G +G+A Sbjct: 151 LLQIEKARRLDINEEVYYEIIRQKTASLIASCCAVGASSVGAAKEVVDKMHAFGEKVGMA 210 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD+ DY GE +E+GK +G D + K TLP+I A EK + I + Sbjct: 211 FQIKDDLFDY-GE-DEIGKPLGIDIKEKKMTLPLIYALNHAPWLEKRRIINIIRNESHKP 268 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + ++++ L + Y ++A L DS ++SL ++V + ++R Sbjct: 269 NKVSEVIAFVKDSGGLRYAQEVMERYVKEALALLNEFADSPHRRSLEQLVQYTIER 324 >gi|308813211|ref|XP_003083912.1| putative polyprenyl diphosphate synthase (ISS) [Ostreococcus tauri] gi|116055794|emb|CAL57879.1| putative polyprenyl diphosphate synthase (ISS) [Ostreococcus tauri] Length = 374 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 105/321 (32%), Positives = 170/321 (52%), Gaps = 20/321 (6%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALMLEYRG--DNH 64 DME++ + I ++ + +GGKRLRP+L ATA+ + D Sbjct: 63 DMEQMRMNLRDIIGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAIKMNMSDITDRQ 122 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 LA E IHTA+L+HDDV+DD RRGK ++G + ++L GDFL +Q+ + Sbjct: 123 RRLAEITEMIHTASLVHDDVLDDCDTRRGKETIHTLYGARVAILAGDFLFAQSSWFLANL 182 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 + E ++ +S V A+GE+ Q N D+T ++Y+ +KTA L +A+ + +S+ + Sbjct: 183 DNLEVIKLISQVIADFADGEISQAGALFNCDITLDEYMEKSHNKTASLIAASCKSASVFS 242 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + SV+ + YG +LG+AFQ+VDD+LD+ ++GK G+D +G T P I A +R Sbjct: 243 ECEESVKIDMYEYGKHLGLAFQVVDDILDFTQSEEQLGKPQGQDLASGNLTAPTIFALKR 302 Query: 245 GTKR----EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + E F K +L++A I+ E+ + + A G A SLR Sbjct: 303 VPELRGLIENQFEKEG---------DLQRAIDIVNEH-GIAEARKLAKREGDIALASLRQ 352 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LPDS K+SL+ +V + L+R+ Sbjct: 353 LPDSDAKRSLVGMVGYVLERI 373 >gi|304314300|ref|YP_003849447.1| geranyl pyrophosphate synthase [Methanothermobacter marburgensis str. Marburg] gi|2497458|sp|Q53479|IDSA_METTM RecName: Full=Bifunctional short chain isoprenyl diphosphate synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; AltName: Full=Geranyltranstransferase gi|11279236|pir||T45152 bifunctional short chain isoprenyl diphosphate synthase [imported] - Methanobacterium thermoautotrophicum gi|913252|gb|AAB32421.1| bifunctional short chain isoprenyl diphosphate synthase [Methanothermobacter thermautotrophicus] gi|302587759|gb|ADL58134.1| predicted geranyl pyrophosphate synthase [Methanothermobacter marburgensis str. Marburg] Length = 325 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 100/301 (33%), Positives = 167/301 (55%), Gaps = 10/301 (3%) Query: 28 EMIPDVV----KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 ++ PD + ++LI +GGK++RP L L + + ++ +A AIE IHT +L+HDD Sbjct: 25 DITPDTLLKASEHLITAGGKKIRPSLALLSCEAVGGNPEDAAGVAAAIELIHTFSLIHDD 84 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLV--ACT- 139 ++DD +RRG+ + ++WG ++L GD L S+AF VI E + +AL++V +C Sbjct: 85 IMDDDEMRRGEPSVHVIWGEPMAILAGDVLFSKAFEAVIRNGDSERVKDALAVVVDSCVK 144 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + EG+ + + LDVTE++Y+ +I KTA L +AA + +++ G +AL+ YG Sbjct: 145 ICEGQALDMGFEERLDVTEDEYMEMIYKKTAALIAAATKAGAIMGGASEREVEALEDYGK 204 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 +G+AFQ+ DD LD + +GK +G D GK TL V+ A + ++ ++ S + Sbjct: 205 FIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKALEEASEEDRERLISILGS 264 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 G ++ +A I A A Y + AK+ L L DS + +LM + DF L+ Sbjct: 265 GDEG--SVAEAIEIFERYGATQYAHEVALDYVRMAKERLEILEDSDARDALMRIADFVLE 322 Query: 320 R 320 R Sbjct: 323 R 323 >gi|312200053|ref|YP_004020114.1| polyprenyl synthetase [Frankia sp. EuI1c] gi|311231389|gb|ADP84244.1| Polyprenyl synthetase [Frankia sp. EuI1c] Length = 333 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 92/298 (30%), Positives = 151/298 (50%), Gaps = 2/298 (0%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I S+ + + ++L +GGKR RPM+ L A + + A AIE H +TL HD Sbjct: 36 IRSEFAFVTEASRHLTDAGGKRFRPMVVLLAAHFADPAAPEVIQAAAAIELTHLSTLYHD 95 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D++ LRRG +A W N ++LVGD+L ++A + EA L+ TL E Sbjct: 96 DVMDEAPLRRGAASANARWTNTVAILVGDYLFARA-SEITADLGPEATRILAQTIATLCE 154 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G++R+ D E YL V+ KTA L +A+ + ++++G L ++G +G Sbjct: 155 GQIRETVGPMPDDDPVEHYLRVVTGKTASLIAASGRLGAMMSGADPVTADILATFGERIG 214 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 + FQL DD++D + GK G D R G TLPV+ RG + + + + G Sbjct: 215 VCFQLSDDIIDVSSATADSGKTPGTDLRAGVLTLPVLYTL-RGRDKGADRLRELVAGGFT 273 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +++A I+R + + + S+ A+ L LP+SS + +L + DF + R Sbjct: 274 ADPAVEEALEILRGHAGMDEARAELRSWAASARGCLAPLPESSARTALESLTDFVIAR 331 >gi|255575167|ref|XP_002528488.1| solanesyl diphosphate synthase, putative [Ricinus communis] gi|223532097|gb|EEF33905.1| solanesyl diphosphate synthase, putative [Ricinus communis] Length = 420 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 99/328 (30%), Positives = 177/328 (53%), Gaps = 11/328 (3%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL------ATA 54 +K L ++ D++ +N + + ++ ++ + + +GGKR+RP L A Sbjct: 98 VKNLFEVVADDLQTLNQNLRLIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVARATAEV 157 Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 + L+ H LA IE IHTA+L+HDDV+D+S +RRGK ++G + ++L GDF+ Sbjct: 158 IGLKELTIKHRRLAEIIEMIHTASLIHDDVLDESNMRRGKETVHQLYGTRVAILAGDFMF 217 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 +Q+ + ++ E ++ +S V A GE++Q S + DV E+YL KTA L + Sbjct: 218 AQSSWYLANLENIEVIKLISQVIKDFASGEIKQASSLFDCDVELEEYLIKSYYKTASLIA 277 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A+ + +++ +GV SV + + YG NLG++FQ+VDD+LD+ ++GK G D G Sbjct: 278 ASTKGAAIFSGVDRSVAEQMYEYGKNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNL 337 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 T PVI A ++ TK + I +L +A ++++ R + + A A Sbjct: 338 TAPVIFALEKETK-----LREIIESEFCETGSLDEAIELVKQCRGIEKAQELAKEKADLA 392 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +L CLP +++ +L +V + L+R++ Sbjct: 393 IQNLDCLPRGAFRSALEGMVLYNLERID 420 >gi|124027425|ref|YP_001012745.1| geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM 5456] gi|123978119|gb|ABM80400.1| Geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM 5456] Length = 336 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 95/315 (30%), Positives = 165/315 (52%), Gaps = 9/315 (2%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 V+ I ++ + + + D +LI +GGKRLRP + +A A L + + A A+E + Sbjct: 20 VDGYIYAKVKGEPKEVYDAGLHLIRAGGKRLRPAIVVAIAEALGEPAERALPFAAAVELV 79 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--------KS 126 H TL+HDD++D RRG VWG ++ GD L ++AF + + + Sbjct: 80 HNFTLIHDDIMDRDEFRRGVPTVHKVWGEPLAITAGDLLFAKAFETLTDALDKGIPPDRV 139 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A LS + +AEG+ L + +V+ ++YL +I KT LF A+ + L+A Sbjct: 140 ARATRVLSRASAVIAEGQAMDLMFEEEDEVSIDEYLIMIYKKTGALFEASAVLGGLVATG 199 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ + L +G NLGIAFQ+ DD+L G+ E+GK + D R GK TLP+I A + Sbjct: 200 DDATLEKLAEFGKNLGIAFQIRDDILGIVGKEEELGKPVYSDIREGKKTLPIIYALRNLE 259 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-CLPDSS 305 ++ + + + S E L++A ++ + A+ E +A Y +A ++LR +P+++ Sbjct: 260 DEDREKLVMVLGNREASREELEQAAKLVVASGAIDYAESKAREYIDRALEALRGAVPENN 319 Query: 306 WKKSLMEVVDFCLQR 320 +++ L E+ F R Sbjct: 320 YRRILEELAKFVATR 334 >gi|87124214|ref|ZP_01080063.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. RS9917] gi|86167786|gb|EAQ69044.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. RS9917] Length = 323 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 167/315 (53%), Gaps = 8/315 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVL 66 +D+E + + I + ++ ++L +GGKRLRP + L + L GD H Sbjct: 13 QDLEALLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALSPSGDLTARHRR 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+L+HDDVVD++A RRG + ++ +VL GDFL +QA + Sbjct: 73 LAEITEMIHTASLVHDDVVDEAATRRGVATVHSRFNHRVAVLAGDFLFAQASWHLANLDD 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E ++ LS V LA+GE++Q + T YL KTA L + + + + +++G Sbjct: 133 LEVVKLLSRVIMDLADGEVKQGLFRYDTGQTFATYLEKSYCKTASLIANSAKAAGVLSGE 192 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 QAL YG LG+AFQ+VDD+LD+ G ++GK D +G T P + A + Sbjct: 193 SPDHLQALYHYGRQLGLAFQVVDDILDFTGSDQQLGKPAASDLASGYLTAPALYALEEQH 252 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + DG +L++A ++R + A+ T A ++ ++A+++L LP+S Sbjct: 253 TLAGLIEREFSGDG-----DLEQALELVRASSAIPRTRELAETFAREAREALAWLPESPS 307 Query: 307 KKSLMEVVDFCLQRL 321 +++L+++ DF L RL Sbjct: 308 RRALLDLPDFVLGRL 322 >gi|289641413|ref|ZP_06473577.1| Trans-hexaprenyltranstransferase [Frankia symbiont of Datisca glomerata] gi|289508749|gb|EFD29684.1| Trans-hexaprenyltranstransferase [Frankia symbiont of Datisca glomerata] Length = 333 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 98/317 (30%), Positives = 158/317 (49%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 LE + + V ++ + SDV + + ++L+ +GGKR RPM+ L A + Sbjct: 17 LEQAVRRGLYGVERMLRDAVRSDVPFVTETSRHLVDAGGKRFRPMVVLLAAHFGDPEAIG 76 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A AIE H +TL HDDV+D++ LRRG +A + W N ++L GDFL ++A + + Sbjct: 77 VLPAAVAIELTHLSTLYHDDVMDEAPLRRGAASANVRWTNTIAILTGDFLFARASDITAD 136 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 EA L+ TL EG++R+ S E YL VI+ KTA L + + + +++ Sbjct: 137 L-GPEATRILARTIATLCEGQIRETVGSLPGQDPVEHYLRVIREKTASLIATSGRLGAML 195 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG AL ++G G+AFQL DD++D + GK G D R G PTLPV+ A + Sbjct: 196 AGADLITVDALAAFGDYFGVAFQLSDDLIDVASDQAASGKTPGTDLREGIPTLPVLYALE 255 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 +S + DG L +A ++R + A+ + +A+D L L Sbjct: 256 DDDAAAARL-RSLMKDGFAVEGALAEALDLLRGHPAMGRARREVARWAGQARDCLAVLEK 314 Query: 304 SSWKKSLMEVVDFCLQR 320 + +L + D+ + R Sbjct: 315 GPARTALEALADYVIDR 331 >gi|295706420|ref|YP_003599495.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium DSM 319] gi|294804079|gb|ADF41145.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium DSM 319] Length = 321 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 160/305 (52%), Gaps = 17/305 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + +D +I D +L+ +GGKR+RP+ L A Y D +A A+E IH A+L+HD Sbjct: 25 VHTDETLITDASLHLLQAGGKRIRPVFVLLAAKFGHYNIDQIKHVAVALELIHMASLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ RRGK + W N+ ++ GD++ ++A ++ E K EA + LS L Sbjct: 85 DVIDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEVMSEVKDVEAHKILSNTMVELTL 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ NL+ YL IK KTA+L +A+ ++ ++ AG + + L +G +G Sbjct: 145 GEIEQIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLGAIAAGAPEDIHKRLFWFGYYVG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR-------EKNFWKS 255 ++FQ+ DD+LD+ ++GK +G D G TLPV+ A + R E+ + + Sbjct: 205 MSFQITDDILDFISSEEQLGKPVGSDLLQGNITLPVLYAIENAEFRDKVEQLFEREYEQE 264 Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 IN+ + ++K + I R + Y QKA L LP + KK+L ++ Sbjct: 265 LINE---IISDIKSSNAIERSFEM-------SDRYLQKAMSILEELPPNKAKKTLHQIAK 314 Query: 316 FCLQR 320 + +R Sbjct: 315 YIGKR 319 >gi|260591948|ref|ZP_05857406.1| decaprenyl diphosphate synthase [Prevotella veroralis F0319] gi|260536232|gb|EEX18849.1| decaprenyl diphosphate synthase [Prevotella veroralis F0319] Length = 326 Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 165/313 (52%), Gaps = 3/313 (0%) Query: 11 DMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 + E V+F+ L D E ++ V+ ++ GKR+RP+L L A A Sbjct: 12 EAELVDFIDLFNNALDHEDGLLQMVLNHIKQRAGKRMRPILILLIAKNFGKVSSITQHAA 71 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E +HTA+L+HDDVVD++A RRG+ + + N+ +VLVGD++LS A V T S+ Sbjct: 72 VGLELLHTASLVHDDVVDEAAERRGQASVNADYDNKVAVLVGDYVLSTALLHVSYTHSEM 131 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + L+ + TL++GE+ QLS +N +VTEE Y +I+ KTA LF + + AG Sbjct: 132 IVRRLAELGRTLSDGEILQLSNIQNKEVTEEVYYKIIERKTAALFETCAAIGAESAGATE 191 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +A + +G NLGI FQ+ DD+ DY E+GK G DF GK TLP+I A Sbjct: 192 EQVEAARLFGKNLGIVFQIRDDIFDYYDSEVEIGKPTGNDFAEGKLTLPIIYALNATQNE 251 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWK 307 + + ++ E ++ +EN + + R + + +A+ + + + D + + Sbjct: 252 DMMRLIHKVKAHNVTHEEVETLVRFAKENGGIEYAQRRMWDFHAEAQGFIDKYVKDETIR 311 Query: 308 KSLMEVVDFCLQR 320 SL +D+ ++R Sbjct: 312 TSLQTYLDYVIKR 324 >gi|225174192|ref|ZP_03728191.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] gi|225169977|gb|EEG78772.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] Length = 324 Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 94/283 (33%), Positives = 145/283 (51%), Gaps = 2/283 (0%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 + GGKRLRP + L V +A AIE IHTA+L+HDDV+D +A RRG Sbjct: 42 VIRGGKRLRPAMVLLCGSFYASPQTELVDMATAIELIHTASLVHDDVIDHAASRRGHPTV 101 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 WG+ +VL GDFL ++AF ++ + LE ++ + EGE+ Q + N +VT Sbjct: 102 SAKWGDHQAVLYGDFLFARAFSLLTKHGQVGVLENMTRAISLMCEGEIEQAASRFNPNVT 161 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E DY+ I KTA SA + + + ++AL ++G+ LG AFQ++DD+LDY Sbjct: 162 EADYISYIHKKTAYFISACCLAGAEACDMPPAEKKALATFGLQLGYAFQMIDDLLDYTAN 221 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 +GK +D + G TLPVI + R + I + + N++ ++E Sbjct: 222 PGALGKPTLQDLKEGYLTLPVIRLLKE--PRFALHVRKIIENRDFTANNMEFISRALQEC 279 Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 L T+ RA + +AK +L LP K L + D+ ++R Sbjct: 280 GILQQTQERARTLIDRAKRNLEKLPQKPPKIILSRLADYVVRR 322 >gi|158317822|ref|YP_001510330.1| polyprenyl synthetase [Frankia sp. EAN1pec] gi|158113227|gb|ABW15424.1| Polyprenyl synthetase [Frankia sp. EAN1pec] Length = 338 Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 97/316 (30%), Positives = 160/316 (50%), Gaps = 7/316 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + V ++ + S+ + + ++L+ +GGKR RPM+ L A + V A AI Sbjct: 25 LAAVEEMLRGSVRSEFSFVTEASRHLVDAGGKRFRPMVVLLAAQFADPDAAGVVPAAVAI 84 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H +TL HDDV+D++ LRRG +A W N ++L GDFL ++A + EA Sbjct: 85 ELTHLSTLYHDDVMDEAPLRRGAASANARWTNTVAILTGDFLFARA-SEITADLGPEATR 143 Query: 132 ALSLVACTLAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ TL EG++R+ + + D E YL VI KTA L + + + +++AG Sbjct: 144 ILARTIATLCEGQIRETVGVGPGQDPIEH-YLRVITEKTASLIATSARLGAMLAGADPVT 202 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ---RGTK 247 L ++G G+AFQL DD++D + GK G D R G PTLPV+ A Q + Sbjct: 203 TDVLAAFGERFGVAFQLSDDLIDVASPSEDSGKTPGTDLREGIPTLPVLYALQGEDAAAR 262 Query: 248 REKNFWK-STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 R ++ + + ++ + +A ++RE+ A+ + +A++ L LPD S Sbjct: 263 RLRDLLGVNPRTEAGVTESGVVEALELLREHPAMDRARAELIRWSSEARECLAPLPDGSA 322 Query: 307 KKSLMEVVDFCLQRLN 322 K +L + DF + R + Sbjct: 323 KTALESLADFVIDRTS 338 >gi|294501072|ref|YP_003564772.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium QM B1551] gi|294351009|gb|ADE71338.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium QM B1551] Length = 321 Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 160/305 (52%), Gaps = 17/305 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + +D +I D +L+ +GGKR+RP+ L A Y D +A A+E IH A+L+HD Sbjct: 25 VHTDETLITDASLHLLQAGGKRIRPVFVLLAAKFGHYNIDQIKHVAVALELIHMASLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ RRGK + W N+ ++ GD++ ++A ++ E K EA + LS L Sbjct: 85 DVIDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEVMSEVKDVEAHKILSNTMVELTL 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ NL+ YL IK KTA+L +A+ ++ ++ AG + + L +G +G Sbjct: 145 GEIEQIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLGAIAAGAPEDIHKRLFWFGYYVG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR-------EKNFWKS 255 ++FQ+ DD+LD+ ++GK +G D G TLPV+ A + R E+ + + Sbjct: 205 MSFQITDDILDFISSEEQLGKPVGSDLLQGNITLPVLYAIENAEFRDKVEQLFERGYEQE 264 Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 IN+ + ++K + I R + Y QKA L LP + KK+L ++ Sbjct: 265 LINE---IISDIKSSNAIERSFEM-------SDRYLQKAMSILEELPPNKAKKTLHQIAK 314 Query: 316 FCLQR 320 + +R Sbjct: 315 YIGKR 319 >gi|312888574|ref|ZP_07748143.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM 18603] gi|311298888|gb|EFQ75988.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM 18603] Length = 323 Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 91/296 (30%), Positives = 158/296 (53%), Gaps = 2/296 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S V ++ + Y++ GK++RPM +A + ++ A +E +HTATL+HDDV Sbjct: 28 SSVPLLDRITHYIVKRKGKQIRPMFLFLSASLCGGINESTHRGAALVELLHTATLVHDDV 87 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VD+S RRG + +W N+ +VLVGDFLLS+ + IE L+ +S ++EGE Sbjct: 88 VDNSYQRRGFFSINALWKNKIAVLVGDFLLSKGLLLSIENNDFHLLKIVSEAVRQMSEGE 147 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ + +D+ E Y VI+ KTA L ++ + +G ++ + ++ +G +GIA Sbjct: 148 LLQIEKVRRMDIDEPVYYDVIRQKTASLIASCCACGAASSGADDATVEKMRLFGEKIGIA 207 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD+ D+ +++GK +G D + K TLP+I A T EK + + + Sbjct: 208 FQIKDDMFDFG--TDDVGKPLGIDIKEKKITLPLIYALNHTTPTEKKRVINLVKNHNDDA 265 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + + +++ L E + Y +A + L PDS ++SL ++V F +R Sbjct: 266 QKIAEIINFVKQTGGLEYAESQMKLYQDEAFEILHAFPDSESRRSLEQLVRFTTER 321 >gi|148239374|ref|YP_001224761.1| prenyl transferase [Synechococcus sp. WH 7803] gi|147847913|emb|CAK23464.1| Prenyl transferase [Synechococcus sp. WH 7803] Length = 323 Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 157/292 (53%), Gaps = 8/292 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L G+ H LA E IHTA+L+HDDVVD++ Sbjct: 36 AAEHLFSAGGKRLRPGIVLLVSRALSPEGELSPRHRRLAEITEMIHTASLVHDDVVDEAG 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + ++ +VL GDFL +QA + + + ++ LS V LA+GE++Q Sbjct: 96 TRRGVETVHSRFNHRVAVLAGDFLFAQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + T E YL KTA L + + + +++G ++L YG LG+AFQ+VD Sbjct: 156 FRYDTGQTFETYLEKSYCKTASLVANSARAAGVLSGCTEPQLESLYHYGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T P + A ++ + N+G +L + Sbjct: 216 DILDFTGSEQQLGKPAASDLSSGYLTAPALYALEQNPSLGVLIEREFSNEG-----DLDE 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A I+R++ A+ T A + Q+++++L LP+S + +L+E+ DF L RL Sbjct: 271 ALQIVRQSDAIARTRQLAERFAQESREALSWLPESPSRTALLELPDFVLSRL 322 >gi|73748232|ref|YP_307471.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp. CBDB1] gi|73659948|emb|CAI82555.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp. CBDB1] Length = 326 Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 101/295 (34%), Positives = 162/295 (54%), Gaps = 7/295 (2%) Query: 31 PDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 P++ + L I GGK LR L++ +A+ + LA + E +H ATL+HDD +D + Sbjct: 36 PEMAEMLDYILVGGKVLRSALSMLSAMCFGAGIKKVLPLATSSEMLHIATLVHDDAIDKA 95 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+ VWG + ++L+GDFL + A ET + + S +A GEL+Q Sbjct: 96 DTRRGRRTVNAVWGLEKAILLGDFLFAHAAETAAETGNMGIVTLFSQTLQIIASGELKQA 155 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S N D + E+YL I KTA LF A + +++A +S + ++SYG NLG++FQ+V Sbjct: 156 YASFNPDQSYENYLERISGKTAALFVMATKGGAILADASSSDEEIMRSYGYNLGLSFQIV 215 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LD+ G +MGK +G D NG TLP +L R + N K +N + ++ Sbjct: 216 DDILDFVGNAKDMGKPVGSDLNNGTVTLPALLLMDR--YPDNNPIKDMLN-ATDRIPHVA 272 Query: 269 KAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA + M + ++D Y+ A Y A +L LP ++ ++SL ++ +F ++R N Sbjct: 273 KA-VEMINSSDIIDLSYKEAKRYADLACRNLSQLPKTAARESLYQLAEFIVERKN 326 >gi|225011597|ref|ZP_03702035.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-2A] gi|225004100|gb|EEG42072.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-2A] Length = 325 Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 103/333 (30%), Positives = 180/333 (54%), Gaps = 23/333 (6%) Query: 1 MKMLEDLTL---KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 MK++E + + ++ME + + S+V ++ + +++ GK++RPM A ++ Sbjct: 1 MKVVERIKVPIYQEMELFEEKFTQSMFSNVALLNRITHFIVNRKGKQMRPMFVFLVAKLV 60 Query: 58 --------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV 109 YRG A IE IHTATL+HDDVVDDS RRG + +W N+ +VLV Sbjct: 61 GNGKVNERTYRG------ASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLV 114 Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169 GD+LLS+ + IE + + L+ +S+ +++GEL Q+ ++NLD+TE Y +I+ KT Sbjct: 115 GDYLLSKGLLLSIENEDFDLLKIISVAVREMSQGELLQIEKARNLDITETIYYEIIRQKT 174 Query: 170 AVLFSA--ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 A L ++ AL S+ A V+ + + +G LG+AFQ+ DD+ DY + ++GK G Sbjct: 175 ATLLASCCALGAQSVNATVEEV--EKMHHFGEVLGMAFQIKDDLFDYGDQ--KIGKPTGI 230 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287 D + K TLP+I +K EK + + + +K+ ++EN L + Sbjct: 231 DIKEQKMTLPLIYTLNVVSKAEKKALINIVKNKNKDKAKVKELIATVKENGGLDFAIKKM 290 Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +Y ++A L P S ++ +L ++++ ++R Sbjct: 291 ETYRKEALQILFEFPKSEYRDALELMLNYVIER 323 >gi|328884333|emb|CCA57572.1| Octaprenyl-diphosphate synthase or Dimethylallyltransferase or Geranyltranstransferase (farnesyldiphosphate synthase) or Geranylgeranyl pyrophosphate synthetase [Streptomyces venezuelae ATCC 10712] Length = 336 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 153/305 (50%), Gaps = 4/305 (1%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L SDV I + ++L+ +GGKR RP+L + A + V A +E H AT Sbjct: 31 LLDATKSDVPFITEAAQHLVLAGGKRFRPLLVMLAAQFGDPYAPGVVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A WGN +VL GDFL ++A + EA+ S Sbjct: 91 LYHDDVMDEADVRRGVDSANTRWGNSIAVLTGDFLFARA-SHTLADLGPEAVRIQSEAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + + + YL V+ KT L + + +++AG SV L YG Sbjct: 150 RLVTGQILETAGPQEGRDPVDHYLDVLGGKTGSLVAVSCRFGAMMAGADESVVDILTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL--AFQRGTKREKNFWKST 256 LG+AFQL DDVLD + +E GK G D R G PTLPV+ A R ++ Sbjct: 210 ERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLHLRAAAAAHGRPEDLELVA 269 Query: 257 INDGKISVENLK-KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + DG +S ++ +A ++R + AL Y ++A+ L LPD K +L E+ D Sbjct: 270 LVDGDLSDDDRHAEALRLLRAHPALEQARRDTVRYAEEARAMLAPLPDGYAKSALAEMCD 329 Query: 316 FCLQR 320 + R Sbjct: 330 AVVHR 334 >gi|323343701|ref|ZP_08083928.1| decaprenyl diphosphate synthase [Prevotella oralis ATCC 33269] gi|323095520|gb|EFZ38094.1| decaprenyl diphosphate synthase [Prevotella oralis ATCC 33269] Length = 336 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 168/314 (53%), Gaps = 8/314 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL---L 67 ++E L + + D ++ ++++ GKR+RPML L L+ + GD + Sbjct: 25 ELEDFTKLFNQSLSHDSGLLSQALEHIRKRAGKRMRPMLIL---LIAKNFGDITPVSQNA 81 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD++LS A V T S+ Sbjct: 82 AVGLELLHTASLVHDDVVDESGERRGQASVNATYNNKVAVLVGDYILSTALLYVSYTHSE 141 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + L+ + TL++GE+ QLS +N +++E+ Y VIK KTA LF A + +L A Sbjct: 142 TIVRYLAQLGRTLSDGEILQLSNIQNREISEKVYYEVIKQKTAALFEACAGIGALSAHAS 201 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 S +A K +G NLGI FQ+ DD+ DY + E+GK G D GK TLPVI A Sbjct: 202 ESDVEAAKKFGQNLGIIFQIRDDIFDYY-DSKEVGKPTGNDMSEGKLTLPVIYALNSTGD 260 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSW 306 + + + I+ + + +++ + + + + +A+ + + +S Sbjct: 261 KAMMELAKKVKEHSITADEIAALVAFTKQHGGIEYADKCMWKFHAEAQKFIEEKVLNSEI 320 Query: 307 KKSLMEVVDFCLQR 320 K++L +DF ++R Sbjct: 321 KQALQAYLDFVIER 334 >gi|269836542|ref|YP_003318770.1| polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745] gi|269785805|gb|ACZ37948.1| Polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745] Length = 321 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 169/312 (54%), Gaps = 2/312 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ +V + + + D + ++++ LI +GGKRLRP+L L A Y + + A Sbjct: 8 DVARVEDRLREEVRVDFPFVGEILQGLIEAGGKRLRPLLLLLAARPFNYVFERLLPAAVG 67 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +HTA+L+HDD VD + LRRG+ ++ +T +L+GD++ +++ M T++ + Sbjct: 68 VELLHTASLIHDDTVDKAMLRRGRPTLNSLFNTETVILLGDYIFARSAMMAAATQNPRVV 127 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + + + +G+LR++ ++ L + +DY I KTA LF+ + E+ +++ + Sbjct: 128 QVFASSLAHICDGQLREIFTARELQQSIDDYRKRIFGKTASLFAGSAEMGAILGEANDEQ 187 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--RGTKR 248 AL+ +G +LG+AFQ+VDDVLD R +++GK G D R G TLP +L FQ RG R Sbjct: 188 IDALRRFGGHLGMAFQIVDDVLDLRESTDQIGKPAGLDLRQGTITLPTMLFFQLNRGNGR 247 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + + + E+ A ++RE+ AL A Y + AK+ LR +P + Sbjct: 248 HAELVRRVVGGHDATDEDYATATAVIRESGALEHALEIAAEYVRNAKEELRAIPAGEGRD 307 Query: 309 SLMEVVDFCLQR 320 L + D L R Sbjct: 308 MLEVLADHSLSR 319 >gi|297192769|ref|ZP_06910167.1| isoprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC 25486] gi|197721043|gb|EDY64951.1| isoprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC 25486] Length = 336 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 101/316 (31%), Positives = 157/316 (49%), Gaps = 12/316 (3%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + V +L S+V I + ++L+ +GGKR RP+L + A + V A + Sbjct: 24 LSAVEAGLLDATKSEVPFITEAAQHLVRAGGKRFRPLLVMLAAQFGDPYAPGIVPSAVVV 83 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A ++ EA+ Sbjct: 84 ELTHLATLYHDDVMDEADVRRGVDSANTRWGNSVAVLTGDFLFARA-SHILADLGPEAVR 142 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + L G++ + + ++ + YL V+ KT L + ++ ++++G V Sbjct: 143 IQAEAFERLVTGQILETAGPRDGRDPVDHYLDVMAGKTGSLVAVSVRFGAMMSGADERVV 202 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV--ILAFQRGTKRE 249 L YG LG+AFQL DDVLD + +E GK G D R G PTLPV + A R Sbjct: 203 DTLTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGVPTLPVLRLRAMADAEGRP 262 Query: 250 KN-----FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 ++ +S + D E L++ +RE+ AL Y Q+A+ L LPD Sbjct: 263 EDLELVALLESDLTDDDRHAEALRR----LREHPALEQARKDTVRYAQEARAMLAPLPDC 318 Query: 305 SWKKSLMEVVDFCLQR 320 S K +L E+ D + R Sbjct: 319 SAKAALEELCDAVVHR 334 >gi|86606912|ref|YP_475675.1| solanesyl diphosphate synthase [Synechococcus sp. JA-3-3Ab] gi|86555454|gb|ABD00412.1| solanesyl diphosphate synthase [Synechococcus sp. JA-3-3Ab] Length = 323 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 167/313 (53%), Gaps = 8/313 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLL 67 D+E++ + + + + ++ ++L +GGK +RP + L A G+ H L Sbjct: 14 DLERLRQNLSRLVSAKHPILAMAAEHLFSAGGKGIRPAIVLLIARATTPDGEITPQHWRL 73 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A E IHTA+L+HDDV+D + +RRG ++ N+ +VL GD+L QA + + Sbjct: 74 AEITEMIHTASLVHDDVIDTADVRRGIDTVNTLFDNRVAVLAGDYLFGQAAWYLANLDNL 133 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 E ++ LS V L EGE+RQ + DV+ E+YL KTA L S + + + L++GV Sbjct: 134 EVVKLLSKVIMDLPEGEVRQSLTRFDPDVSLEEYLAKSFYKTASLISGSSKAAGLLSGVS 193 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 V L +G +LGIAFQ+VDD+LD+ +GK +G D G T PV+ A + + Sbjct: 194 PEVADRLFDFGRDLGIAFQIVDDLLDFTASAEMLGKPVGSDLIQGNLTAPVLFALEEFPQ 253 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + ++L++A + ++ + + A Y ++A ++L LPDS + Sbjct: 254 MRELILRELAEP-----QDLQQALEWVYQSNGIPRSRELARDYARRAAEALEVLPDSVAR 308 Query: 308 KSLMEVVDFCLQR 320 ++L ++VD+ L+R Sbjct: 309 RALFQMVDYVLER 321 >gi|312137122|ref|YP_004004459.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Methanothermus fervidus DSM 2088] gi|311224841|gb|ADP77697.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Methanothermus fervidus DSM 2088] Length = 322 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 161/290 (55%), Gaps = 7/290 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 +LI +GGKR+RP L L + + + ++ + A AIE IHT +L+HDD++D +RRG+ Sbjct: 33 HLIEAGGKRIRPSLVLLSTESVGGKIEDALNAATAIELIHTFSLIHDDIMDKDEVRRGRA 92 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE-----ALEALSLVACTLAEGELRQLSL 150 ++WG ++L GD L S+AF +++++ E L+ ++ L +G+ + Sbjct: 93 TVHVIWGEPLAILAGDVLFSKAFEVMLKSNIDEKRLVKVLDVMTKACVNLCKGQAYDMLF 152 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 KN +V E++YL +I KTA L +A+ ++ ++I AL +YG LG+AFQ+ DD Sbjct: 153 EKNFEVKEKEYLEMIYYKTASLIAASTKIGAIIGNGSKEEINALYNYGKFLGLAFQIHDD 212 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 LD G+ ++GK +G D GK TL I A K ++ S + G + +K A Sbjct: 213 YLDIAGDEKQLGKPVGSDIVEGKMTLIAIKALNEANKEDREKLISILQSG--DEKKVKDA 270 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I ++ ++ T +A Y +KAK S+ L DS K +L+ + DF ++R Sbjct: 271 IEIFKKYNSIEYTHEKALKYAKKAKASIEVLEDSKAKDTLLSIADFVVKR 320 >gi|258648864|ref|ZP_05736333.1| octaprenyl-diphosphate synthase [Prevotella tannerae ATCC 51259] gi|260850886|gb|EEX70755.1| octaprenyl-diphosphate synthase [Prevotella tannerae ATCC 51259] Length = 326 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 88/279 (31%), Positives = 146/279 (52%), Gaps = 1/279 (0%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP+L L A + + A +E +HTA+L+HDDVVDDS RRG+ + ++ Sbjct: 47 GKMMRPILVLLAAKAFAPISEKTLRSAVTLELLHTASLIHDDVVDDSGERRGQASVNALF 106 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161 GN+ +VLVGD+LLS++ T +E ++ + TLAEGE++QL+ + TEE Y Sbjct: 107 GNKVAVLVGDYLLSKSLHQAYLTDDLRIVEIVARLGGTLAEGEVKQLANIRQSVATEEAY 166 Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 VI+ KTA LF+A + ++ A + + ++G +G+ FQ+ DD+ DY + + Sbjct: 167 FDVIRHKTAALFAACTRLGAISADCAPATVEQAATFGEIIGLCFQIRDDIFDYYDD-ETI 225 Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281 GK G D GK TLP I A + + W + + D + E +K + + + Sbjct: 226 GKPTGNDLMEGKLTLPAIYALNHTNRTDVQTWVAHVKDSTATPEEIKSLVDFTKGSGGID 285 Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 R ++A L PD + ++SL +++ + R Sbjct: 286 YAHQRMEELRKEAAQVLNAFPDEAVRRSLAAYLEYTIDR 324 >gi|145355263|ref|XP_001421884.1| chloroplast Clp protease, subunit of ClpP peptidase complex [Ostreococcus lucimarinus CCE9901] gi|144582123|gb|ABP00178.1| chloroplast Clp protease, subunit of ClpP peptidase complex [Ostreococcus lucimarinus CCE9901] Length = 311 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 160/288 (55%), Gaps = 12/288 (4%) Query: 40 SGGKRLRPMLTL----ATALMLEYRG--DNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +GGKRLRP+L ATA ++ D LA E IHTA+L+HDDV+DD RRG Sbjct: 29 AGGKRLRPVLVFLVARATAELMHMSDITDRQRRLAEITEMIHTASLVHDDVLDDCDTRRG 88 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K ++G + ++L GDFL +Q+ + + E ++ +S V A+GE+ Q N Sbjct: 89 KETIHTLYGARVAILAGDFLFAQSSWFLANLDNLEVIKLISQVIADFADGEISQAGALFN 148 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 D+T ++YL +KTA L +A+ + +++ + V SV+ + YG +LG+AFQ+VDD+LD Sbjct: 149 CDLTLDEYLEKSHNKTASLIAASCKSAAVFSEVTESVKVDMYEYGKHLGLAFQVVDDILD 208 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 + ++GK G+D +G T P I A R K ++ I + +L++A I Sbjct: 209 FTQSEEQLGKPQGQDLASGNLTAPTIFAL-----RAKPELRALIETQFENEGDLQRAIEI 263 Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 + E L + + A G A SLR LPDS K+SL+ +V + L+R+ Sbjct: 264 VNEF-GLEEAQKLAKREGDIALASLRQLPDSEAKRSLVGMVGYVLERI 310 >gi|88808408|ref|ZP_01123918.1| Trans-hexaprenyltranstransferase [Synechococcus sp. WH 7805] gi|88787396|gb|EAR18553.1| Trans-hexaprenyltranstransferase [Synechococcus sp. WH 7805] Length = 323 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 8/292 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L G+ H LA E IHTA+L+HDDVVD++ Sbjct: 36 AAEHLFSAGGKRLRPGIVLLVSRGLSPEGELSPRHRRLAEITEMIHTASLVHDDVVDEAG 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + ++ +VL GDFL +QA + + + ++ LS V LA+GE++Q Sbjct: 96 TRRGVETVHSRFNHRVAVLAGDFLFAQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + T E YL KTA L + + + +++G ++L YG LG+AFQ+VD Sbjct: 156 FRYDTGQTFETYLEKSYCKTASLIANSARAAGVLSGCTEPQLESLYHYGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T P + A + + N+G +L + Sbjct: 216 DILDFTGSDQQLGKPAASDLSSGYLTAPALYALEENPSLGVLIEREFSNEG-----DLDE 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A I+R++ A+ T A + Q+++++L LP+S + +L+E+ DF L RL Sbjct: 271 ALRIVRQSDAIARTRQLAERFAQESREALSWLPESPSRSALLELPDFVLSRL 322 >gi|15669051|ref|NP_247855.1| bifunctional short chain isoprenyl diphosphate synthase IdsA [Methanocaldococcus jannaschii DSM 2661] gi|2497457|sp|Q58270|IDSA_METJA RecName: Full=Bifunctional short chain isoprenyl diphosphate synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; AltName: Full=Geranyltranstransferase gi|1591545|gb|AAB98865.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Methanocaldococcus jannaschii DSM 2661] Length = 327 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 158/293 (53%), Gaps = 12/293 (4%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 K+L+F+GGKR+RP LT+ T ++ + + + A A+E IH TL+HDD++D+ RRGK Sbjct: 40 KHLLFAGGKRIRPYLTVVTYMLKKDDIEEVLPAAAAVELIHNYTLIHDDIMDNDDERRGK 99 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACTLAEGELRQLSL 150 +V+G ++L GD L ++AF V K+ E L+ LS + EG+ + Sbjct: 100 PTVHVVYGEPMAILAGDLLYAKAFEAVSRIKDNKKAHEVLKILSKACVEVCEGQAMDMEF 159 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 N T E+YL +I+ KT L A++ + +++A R+ALK Y +G+ FQ+ DD Sbjct: 160 E-NYYPTMEEYLDMIRKKTGALLEASVGIGAVMADCNEEEREALKEYAKRIGLTFQIQDD 218 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 VLD G+ ++GK +G D R GK T+ VI A + + +K + + + E +K+A Sbjct: 219 VLDLIGDQKKLGKPVGSDIREGKKTIIVIHALKTLDEDKKKRLLEILGNKNVKDEEIKEA 278 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSSWKKSLMEVVDFCLQRL 321 I++ + EY QK +++ L + +K L ++ DF + R+ Sbjct: 279 IEILKPS-----IEYAKELMKQKTEEAKEYLKIFNKDRRKVLEDLADFIMSRI 326 >gi|288818513|ref|YP_003432861.1| octoprenyl-diphosphate synthase [Hydrogenobacter thermophilus TK-6] gi|288787913|dbj|BAI69660.1| octoprenyl-diphosphate synthase [Hydrogenobacter thermophilus TK-6] gi|308752103|gb|ADO45586.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6] Length = 307 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/213 (40%), Positives = 131/213 (61%), Gaps = 3/213 (1%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 V+ I +V Y+I SGGKR+RP+L+L T L + LA IE+IH A+LLHDDVVD Sbjct: 23 VKAILEVGSYIISSGGKRMRPVLSLLTCKALGGDERKVLPLAVGIEYIHVASLLHDDVVD 82 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 + RRG+++A LV+GN VL GD++ ++A + +++E +S +A+G++ Sbjct: 83 GADRRRGRLSANLVFGNDLCVLTGDYMYAKALWLYSRYGDIKSIEIVSRAVMDMAQGQVL 142 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 +L ++ + +E Y +I KT VLF A++ V +L+AG ++ R G+ +G AFQ Sbjct: 143 ELKSIGDI-IDQETYFSIIDRKTGVLFGASMAVGALMAGREDYER--FYQMGLKVGRAFQ 199 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 LVDD LDY G ++GK +G D R GK T P+I Sbjct: 200 LVDDALDYSGSEEKLGKPVGNDLREGKCTYPLI 232 >gi|242399212|ref|YP_002994636.1| Bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sibiricus MM 739] gi|242265605|gb|ACS90287.1| Bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sibiricus MM 739] Length = 341 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 161/308 (52%), Gaps = 16/308 (5%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I D ++ +GGKR+RP + L + + + V A A+E +H +L+HDD++D Sbjct: 32 IIYDAARHYPLAGGKRIRPFIVLTSTEAVGGNPEKAVYAAAAVELLHNYSLVHDDIMDMD 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLVACT---LAEG 143 RRG+ VWG ++L GD L S+ F V I ++++ ++ L +++ T L EG Sbjct: 92 EKRRGRPTVHKVWGVNMAILAGDLLFSKVFEAVAKIPVEAEKVVKVLDVISKTSNELCEG 151 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + R L VT ++Y+ +I KT L A+ + LI N QAL YG N+GI Sbjct: 152 QARDLEFENKETVTIDEYMKMISGKTGALIDASATIGGLIGTENNEYIQALSKYGRNVGI 211 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK-NFWK-------S 255 AFQ+ DDVLD + ++GK +G D R GK T+ V + ++ +K F+K Sbjct: 212 AFQIWDDVLDLIADEEKLGKPVGSDIRKGKKTIIVAHFLENASEEDKLKFFKVFGKYAGD 271 Query: 256 TINDGKIS---VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 +G I E +KKA ++++ + A ++AK++L+ LP+S +K L Sbjct: 272 VKGEGIIEEDIQEEVKKAIDLLKKYGSTDYAANLARKLIEEAKEALKALPESEARKHLEL 331 Query: 313 VVDFCLQR 320 + DF ++R Sbjct: 332 LADFIVER 339 >gi|327400499|ref|YP_004341338.1| polyprenyl synthetase [Archaeoglobus veneficus SNP6] gi|327316007|gb|AEA46623.1| Polyprenyl synthetase [Archaeoglobus veneficus SNP6] Length = 319 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 106/323 (32%), Positives = 178/323 (55%), Gaps = 14/323 (4%) Query: 4 LEDLTLKDMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 +++ LK E +N I + + + E + + ++LI +GGKRLRP++ L +A + + Sbjct: 3 IKEEVLKRSEIINRAISEYLPVKEPEGLYNAARHLINAGGKRLRPVMCLISAEAVGGDVE 62 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---- 118 + + A AIE IH TL+HDD++D LRRG + + T++L GD L ++AF Sbjct: 63 SVIPAAVAIETIHNFTLIHDDIMDRDELRRGVPTVHVAYDEPTAILAGDTLFAEAFKILS 122 Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 C V +A L+ V + EG+ +S K ++E +YL +++ KTAVL ++A Sbjct: 123 SCNVEAENLVKASRMLADVCIEICEGQYLDMSFEKREKISESEYLEMVRKKTAVLIASAC 182 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +++ G+ +S +AL ++G+ GI FQ+ DDVLD G+ +++GK+ G D GK TL Sbjct: 183 AMPAVLFGM-DSYAKALWNFGIYSGIGFQIHDDVLDITGK-DKIGKDWGSDIVEGKKTLI 240 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 +I A + G + E G SVE +++A ++E AL +A Y ++ K Sbjct: 241 MIKAMELGVEIE------IFGRGSASVEEIEEAVEKLKECGALDYARQKAQEYVERGKRE 294 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L LPDS K L+E+ D+ + R Sbjct: 295 LDVLPDSKAKSLLIELADYLVTR 317 >gi|159470571|ref|XP_001693430.1| solanesyl diphosphate synthase [Chlamydomonas reinhardtii] gi|158282933|gb|EDP08684.1| solanesyl diphosphate synthase [Chlamydomonas reinhardtii] Length = 394 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/317 (30%), Positives = 168/317 (52%), Gaps = 11/317 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR------GDNH 64 DM+++N + + + M+ + + +GGK+LRP++ A R + H Sbjct: 82 DMQQMNTNLKNVVGNRHPMLMAAAEQIFGAGGKKLRPVIVFLVAHCTAQREGLTELTEKH 141 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 LA E IHTA+L+HDDV+D+ +RRGK ++G + +VL GDFL +Q+ + Sbjct: 142 RRLAEITEMIHTASLVHDDVLDECDIRRGKQTINSMYGTRVAVLAGDFLFAQSSWFLANL 201 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 + E ++ +S V A GE+ Q + + D+T E YL KTA L +A+ +++ + Sbjct: 202 DNLEVIKLISQVIADFANGEISQAASLFDTDITLEQYLDKSFYKTASLIAASCRSAAVFS 261 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V++A+ +YG +LG+AFQ+VDD+LD+ ++GK G+D +G T PVI A ++ Sbjct: 262 DSPVEVKEAMYAYGKHLGLAFQVVDDILDFTQTSEQLGKPQGQDLASGNLTAPVIFALRK 321 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + + +G +L++A ++ E + + A A +L CLP+ Sbjct: 322 SPELLDIISSEFVEEG-----SLQRALQLVNETGGIEEARLLARQQADLALSALECLPEG 376 Query: 305 SWKKSLMEVVDFCLQRL 321 S ++SL +VD+ L R+ Sbjct: 377 SSRRSLRLMVDYVLDRI 393 >gi|297570179|ref|YP_003691523.1| Trans-hexaprenyltranstransferase [Desulfurivibrio alkaliphilus AHT2] gi|296926094|gb|ADH86904.1| Trans-hexaprenyltranstransferase [Desulfurivibrio alkaliphilus AHT2] Length = 336 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 157/299 (52%), Gaps = 11/299 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVL---------LACAIEFIHTATLLHD 82 ++++ + +GGKR+RP+LTL A +++ ++G + LA + E++HTA+LLHD Sbjct: 36 ILEHALLAGGKRIRPLLTLLAAQLVQGHKGTENPQAGTATPWQQLAISFEYLHTASLLHD 95 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D +ALRRG+ W N +++L GDFL ++A + LE + + + Sbjct: 96 DVIDHAALRRGRETVNTRWDNGSAILAGDFLHARALLLAGRAGGVPCLELIGTATQAMVD 155 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 E Q + + D EE Y V+ KTA L +AA E + AG + R+AL +YG NLG Sbjct: 156 SEFIQQEAAASRDWREETYFAVLDGKTAALIAAACEAGGVAAGGNPAQRRALHTYGGNLG 215 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-DGK 261 AFQ++DD+LDY GE GK +G D + GK TLP+++A QR + ++ ++ I + Sbjct: 216 RAFQIIDDLLDYLGEPGATGKAVGNDLQEGKMTLPLLIARQRASAEQQAELEAIITAPAQ 275 Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E + ++ + AL RA +L + + L + + LQR Sbjct: 276 RRREQFTRVRTLLEQTGALAACRQRAEELIAAGDQALAVFAATPQRDLLHALGQYVLQR 334 >gi|88855944|ref|ZP_01130606.1| trans-hexaprenyltranstransferase [marine actinobacterium PHSC20C1] gi|88814811|gb|EAR24671.1| trans-hexaprenyltranstransferase [marine actinobacterium PHSC20C1] Length = 358 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 165/325 (50%), Gaps = 21/325 (6%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +E+V +L + E+ +YL+ +GGKR+RP+LTL TA + N V A A+ Sbjct: 41 LEQVEAGLLSHMTFADEIADATSRYLLEAGGKRVRPVLTLLTAQLGSGNNANVVTAAQAV 100 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H A+L HDDV+D++ LRRG +A+ VWGN ++L GD L ++A +I + AL Sbjct: 101 EITHLASLYHDDVMDEAQLRRGVPSAQSVWGNSVAILTGDLLFARA-SKLIAGLGERALI 159 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 S L G+L + K + YL V+ KT L + A EV + + + Sbjct: 160 LQSNTFERLCLGQLHETLGPKPGENPVTHYLQVLADKTGSLIATAAEVGVMFSDAPDEYT 219 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL----------A 241 ++ +G +G+AFQL+DDV+D E + GK G D R+G TLP++ A Sbjct: 220 VPVRDFGEKIGVAFQLIDDVIDLSDETGKTGKKAGTDLRSGVATLPLLYLRELAVTDSEA 279 Query: 242 FQRGTKREK----NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 + T+ E+ NF+ G+ + E L A +RE+ T A +G++A +S Sbjct: 280 AELLTRIERDVNANFY------GEGNEEALDSAVTELREHSVTKKTLEEARRWGREAVES 333 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 L LPD KK+L D ++R N Sbjct: 334 LAPLPDGPVKKALTRFADSIVERSN 358 >gi|168019710|ref|XP_001762387.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686465|gb|EDQ72854.1| predicted protein [Physcomitrella patens subsp. patens] Length = 356 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/318 (31%), Positives = 167/318 (52%), Gaps = 13/318 (4%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML-------TLATALMLEYRGDN 63 D++ +N + K + +D M+ K + +GGKR+RP L T + + E R Sbjct: 44 DLQLLNDNLQKIVGADNPMLMAAAKQIFGAGGKRMRPALVFLVSRATCQLSNIQELR-PQ 102 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H LA E IHTA+L+HDDV+D+S RRGK +G + +VL GDF+ +Q+ + Sbjct: 103 HRRLAEITEMIHTASLIHDDVLDESDTRRGKETVHQTFGTRVAVLAGDFMFAQSSWYLAN 162 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E ++ +S V A GE++Q + +VT ++YL KTA L +++ + +++ Sbjct: 163 LDNLEVIKLISQVIRDFASGEIKQAQNLFDTEVTLQNYLDKSYYKTASLIASSTKSAAIF 222 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + +SV + YGM+LG+AFQ+VDD+LD+ ++GK G D G T PV+ A + Sbjct: 223 SDSTSSVSNQMFDYGMHLGLAFQVVDDILDFTQTSEQLGKPAGSDLSKGNLTAPVLFALE 282 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + + + +G +L+ A ++ + A G AK SL CLP Sbjct: 283 KEPELRELIDSEFTEEG-----SLEAAISLVHRGGGIDRARALAQEQGNLAKKSLECLPQ 337 Query: 304 SSWKKSLMEVVDFCLQRL 321 ++SL ++VD+ L+R+ Sbjct: 338 GDTRRSLEKMVDYVLERI 355 >gi|319900543|ref|YP_004160271.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108] gi|319415574|gb|ADV42685.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108] Length = 312 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 156/291 (53%), Gaps = 7/291 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+ ++ GK +RPML L A + + A A+E +H A+L+HDDVVD+S RR Sbjct: 24 VIAHIRQKNGKMMRPMLVLLAAKLYGEICPATLHAAVALELLHNASLVHDDVVDESTERR 83 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VL GD+LL+ A V T++ ++ +S + LAEGEL QLS Sbjct: 84 GQLSVNAIFNNKVAVLSGDYLLATALVQVGLTRNHAIIDIVSCLGQDLAEGELLQLSNVS 143 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 NL +E+ Y VI+ KTAVLF+A + +L G + + +G +G+ FQ+ DD+ Sbjct: 144 NLQFSEDIYFDVIRKKTAVLFAACTKAGALSVGADGERAEFARLFGEYIGLCFQIKDDIF 203 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E E+GK G D GK TLPV+ A + +G + + + AF+ Sbjct: 204 DYF-ESREIGKPTGNDMLEGKLTLPVLYALNSTGDETAGEIAVKVKNGDATADEI--AFL 260 Query: 273 IMRENRALVDTEYRA---YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I R EY + Y+Y +KA L +PD+ + +L +D+ ++R Sbjct: 261 IEFTKRH-GGIEYASQMMYAYREKALLLLASMPDTDVRTALAAYLDYVVER 310 >gi|158338022|ref|YP_001519198.1| trans-octaprenyltranstransferase [Acaryochloris marina MBIC11017] gi|158308263|gb|ABW29880.1| trans-octaprenyltranstransferase [Acaryochloris marina MBIC11017] Length = 323 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 163/290 (56%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP +L L+ AL+ + H LA E IHTA+LLHDDVVDDS +R Sbjct: 38 EHLFQAGGKRMRPAIVLLLSRALLPDQDLTPRHRRLAEITEMIHTASLLHDDVVDDSGVR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG + ++GN+ ++ GDFL +QA + + E ++ LS V AEGE++Q Sbjct: 98 RGVPSVHSLFGNRIAIQAGDFLFAQASWYLANLDNLEVVKLLSEVIKDFAEGEIQQGINC 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +T E YL KTA L + + + + +++G V Q L +YG +G+AFQ+VDD+ Sbjct: 158 FDTSLTLEAYLEKSYYKTASLMANSAKAAGVLSGTSLQVNQDLYAYGRCVGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ G N +GK D R+G T PV+ A EK + K I+ E+L +A Sbjct: 218 LDFTGSTNALGKPACSDLRSGNLTAPVLFAIA-----EKPYLKVLIDRHLEEEEDLDEAI 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++ +++ + + A + +A L LP S +++L+++ ++ L+RL Sbjct: 273 ALVNDSQGIPKSRALAEQFAHQAVHHLDFLPASDSRQALIDLTEYILKRL 322 >gi|218290932|ref|ZP_03494989.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218239097|gb|EED06300.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 321 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 168/314 (53%), Gaps = 3/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L ++++V L+ +R +D + + L+ +GGKR+RP+ L L ++ Sbjct: 9 LYRHELDRVERLLDERAHADHADLAKAGRTLLEAGGKRIRPLFALICGLGEREWSEDVAK 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A A+E IH ATL+HDDV+D + LRRG+ R +GN ++ GD+L ++A ++ E + Sbjct: 69 VAAALEMIHMATLVHDDVIDRADLRRGRPTVRKSYGNLAAMYTGDYLFARAIQLLAEVDN 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E ++ L EGE+ Q+ N YL I KTA+L S + ++ +++ G Sbjct: 129 LEVHRLMARGIVLLCEGEIEQIQDFYNWSQGVMTYLRRIHRKTALLISLSCQLGAMVGGA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 AL +G +G+AFQ+VDD+LD+ G +GK +G D R G TLP +LA R Sbjct: 189 HKREVAALARFGHAVGMAFQIVDDLLDFTGAAEIVGKPVGGDLRQGNLTLPALLAASRPG 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ ++ + +G + E+ ++A ++ + AL D E A Y +K++ L+ + + Sbjct: 249 FGER--LRALVREG-MREEDAEEAIRLVVASGALADAERLAERYLEKSRHLLQAVSRETV 305 Query: 307 KKSLMEVVDFCLQR 320 + LM + F ++R Sbjct: 306 RAQLMGLTSFIIRR 319 >gi|288917197|ref|ZP_06411566.1| Trans-hexaprenyltranstransferase [Frankia sp. EUN1f] gi|288351388|gb|EFC85596.1| Trans-hexaprenyltranstransferase [Frankia sp. EUN1f] Length = 338 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 152/308 (49%), Gaps = 13/308 (4%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + S+ + + ++L+ +GGKR RPM+ L A + V A AIE H +TL HD Sbjct: 36 VHSEFSFVTEASRHLVDAGGKRFRPMVVLLAAQFADPEAAGVVPAAVAIELTHLSTLYHD 95 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D++ LRRG +A W N ++L GDFL ++A + EA L+ TL E Sbjct: 96 DVMDEAPLRRGAASANARWTNTVAILTGDFLFARA-SEITADLGPEATRILARTIATLCE 154 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G++R+ E YL VI KTA L + + + +++AG L ++G G Sbjct: 155 GQIRETVGPGPGQNQIEHYLRVITDKTASLIATSGRLGAMLAGADRVTADVLAAFGERFG 214 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ---RGTKREKNF-----WK 254 +AFQL DD++D GK G D R G PTLPV+ A + G +R ++ W Sbjct: 215 VAFQLSDDIIDLASPTETSGKTPGTDLREGIPTLPVLYALEGEDAGARRLRDLLGADPWA 274 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 S+ ++ + +A ++RE+ A+ + +A+ L LPD K +L + Sbjct: 275 SS----GVTESAVVEALEVLREHPAMDRARAELARWSGEARACLAPLPDGPAKTALESLA 330 Query: 315 DFCLQRLN 322 DF + R + Sbjct: 331 DFVVDRTS 338 >gi|238062225|ref|ZP_04606934.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149] gi|237884036|gb|EEP72864.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149] Length = 356 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 9/324 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 +E L +E V + + S ++ + ++L+ +GGKR RP+L A + Sbjct: 37 VEASVLGVLESVEAELRASVASADPLVTEAARHLVEAGGKRFRPLLVALGAQFGDPTDPQ 96 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 V A +E H ATL HDDV+D++A+RRG +A W N ++LVGD+L F + Sbjct: 97 VVSAAVVMELTHLATLYHDDVMDEAAVRRGAPSANSRWTNSVAILVGDYL----FARAAD 152 Query: 124 TKSQEALEALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + EA+ L A T A G++ + +N YLHVI KT L + + Sbjct: 153 ISADLGPEAVRLQARTFARLVHGQIAETVGPRNGQDPVSHYLHVIAEKTGSLIATSARFG 212 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L AG + +AL YG +G+AFQL DD+LD E + GK G D R G PTLPV+ Sbjct: 213 GLFAGASATHTEALAGYGETIGVAFQLSDDLLDIASESVQSGKTPGTDLREGVPTLPVLY 272 Query: 241 AFQRGTKREKNF-WKSTINDGKISVENLK-KAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 A + + + G + + L +A ++RE+ AL SY + A++ L Sbjct: 273 ALASDDADAASVRLREILATGPLVDDALHAEALGLLRESPALKRARETVRSYAEDARERL 332 Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322 LPD+ +++L + D+ R + Sbjct: 333 ATLPDNPSRRALESLCDYIADRTS 356 >gi|297842625|ref|XP_002889194.1| solanesyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata] gi|297335035|gb|EFH65453.1| solanesyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata] Length = 406 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 99/323 (30%), Positives = 176/323 (54%), Gaps = 11/323 (3%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALM--LEY 59 +L D++ +N +L + ++ ++ + + +GGKR+RP L ATA + L+ Sbjct: 89 ELVADDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKE 148 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +QA Sbjct: 149 LTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASW 208 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + ++ + ++ +S V A GE++Q S + D +DYL KTA L +A+ + Sbjct: 209 YLANLENLQVIKLISQVIKDFASGEIKQASSLFDCDAKLDDYLLKSFYKTASLVAASTKG 268 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++ + V+ V + + +G NLG++FQ+VDD+LD+ ++GK G D G T PVI Sbjct: 269 AAIFSRVETDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVI 328 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A ++ + + I +L++A ++RE + + A A +L+ Sbjct: 329 FALEKEAR-----LREIIESEFCEAGSLEEAIEMVREGGGIRRAQELAREKADDAIKNLQ 383 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 CLP S++ +L E+V + L+R++ Sbjct: 384 CLPRSAFLSALEEMVMYNLERID 406 >gi|218131733|ref|ZP_03460537.1| hypothetical protein BACEGG_03354 [Bacteroides eggerthii DSM 20697] gi|317474650|ref|ZP_07933924.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA] gi|217986036|gb|EEC52375.1| hypothetical protein BACEGG_03354 [Bacteroides eggerthii DSM 20697] gi|316909331|gb|EFV31011.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 324 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 90/288 (31%), Positives = 155/288 (53%), Gaps = 1/288 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+ ++ GK +RP+L L A + + A A+E +HTA+L+HDDVVD+S RR Sbjct: 36 VIAHIRQKNGKMMRPILVLLAAKLYNEVRPATLHAAVALELLHTASLVHDDVVDESTERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VL GD+LL+ A V T++ ++ +S + LAEGEL QLS Sbjct: 96 GQLSVNAIFNNKVAVLTGDYLLATALVEVGMTRNYAIIDLVSNLGQDLAEGELLQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N + +EE Y VI+ KTAVLF+A ++ +L GV + + + +G +G+ FQ+ DD+ Sbjct: 156 NPEYSEEVYFDVIRKKTAVLFAACMKAGALSVGVDDEKAEYARLFGEYIGLCFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E E+GK G D GK TLP + + + +G + + + + Sbjct: 216 DYY-ENKEIGKPTGNDMLEGKLTLPALYVLNSTQDKPAQEIAVKVKNGTATADEIARLIE 274 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +E+ + + +KA L + D+ K++L+ +D+ ++R Sbjct: 275 FTKEHGGIEYATKVMVDFKEKALSLLAAMEDTDVKRALISYLDYVIER 322 >gi|113952964|ref|YP_730756.1| solanesyl diphosphate synthase [Synechococcus sp. CC9311] gi|113880315|gb|ABI45273.1| solanesyl diphosphate synthase [Synechococcus sp. CC9311] Length = 323 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 158/292 (54%), Gaps = 8/292 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L G+ H LA E IHTA+L+HDDVVD+++ Sbjct: 36 AAEHLFSAGGKRLRPGIVLLISRALSADGELSSRHRRLAEITEMIHTASLVHDDVVDEAS 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + + +VL GDFL +QA + + + ++ LS V LA+GE++Q Sbjct: 96 TRRGVETVHSRFNYRVAVLAGDFLFAQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E YL KTA L + + + + +++G+ ++L YG LG+AFQ+VD Sbjct: 156 FRFDTGQSFETYLEKSYCKTASLIANSAKAAGVLSGLSEPQLESLYHYGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T P + A + + DG +L+ Sbjct: 216 DILDFTGSDQQLGKPAASDLSSGYLTAPALYALEERPALSGLIEREFSGDG-----DLET 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++RE+ A+ T A ++ ++A++SL LP+S + +L+E+ DF L RL Sbjct: 271 ALALVRESEAIPRTRELAKTFAREARESLDWLPESPSRTALLELPDFVLSRL 322 >gi|303238014|ref|ZP_07324557.1| polyprenyl synthetase [Prevotella disiens FB035-09AN] gi|302481804|gb|EFL44856.1| polyprenyl synthetase [Prevotella disiens FB035-09AN] Length = 325 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 100/319 (31%), Positives = 163/319 (51%), Gaps = 12/319 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-----NH 64 K+++ L K + D ++ ++++ GGKR+RP+L L LM + G+ H Sbjct: 13 KELDDFISLFNKALTHDDGLLAKALEHIRNRGGKRMRPLLML---LMAKNFGEVTFVAQH 69 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 A +E +HTA+L+HDDVVD+S RRG+ + + N+ +VLVGD++LS A V T Sbjct: 70 A--AIGLELLHTASLVHDDVVDESVQRRGQASMNATYNNKVAVLVGDYILSTALLNVAYT 127 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 +S + + L+ + TL+ GE+ QL+ N +++EE Y VI KTA LF A + + Sbjct: 128 QSDDIVRDLAELGRTLSNGEILQLTNISNQEISEEVYYQVINQKTAALFEACAVIGAKAG 187 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +A + +G +GI FQ+ DD+ DY + E+GK G D GK TLPVI A + Sbjct: 188 RASEEAIEAARLFGQRIGIIFQIRDDIFDYY-DSTEIGKPTGNDMAEGKLTLPVIYALKS 246 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPD 303 + +G +S E + + +++ + E + + A + + D Sbjct: 247 TNNTAMMDLAMKVKEGNVSAEEIAQLVAFTKQSGGIDYAEQKMMEFHSDAMKFITTYVKD 306 Query: 304 SSWKKSLMEVVDFCLQRLN 322 KSL +DF +QR N Sbjct: 307 VEIAKSLQAYLDFVIQRKN 325 >gi|295837107|ref|ZP_06824040.1| trans-hexaprenyltranstransferase [Streptomyces sp. SPB74] gi|197697218|gb|EDY44151.1| trans-hexaprenyltranstransferase [Streptomyces sp. SPB74] Length = 336 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 4/307 (1%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L S V I + ++L+ +GGKR RP+L + A + V A +E H AT Sbjct: 31 LLDATKSGVPFITEAAQHLVLAGGKRFRPLLVMLAAQFGDPEAPGVVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A W N +VL GDFL S+A ++ EA+ + Sbjct: 91 LYHDDVMDEATVRRGVESANARWDNSVAVLTGDFLFSRA-SQILAGLGPEAVRIQAEAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + A ++++G + + L YG Sbjct: 150 RLVTGQILETAGPQDGRDPVDHYLDVLSGKTGSLVAVATRYGAMMSGAGSEAVEILTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK--REKNFWKST 256 LG+AFQL DDVLD + +E GK G D R G TLPV+ +R + ++ T Sbjct: 210 ERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRLRERVARLGLAEDVALDT 269 Query: 257 INDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + G ++ + L +A +MR + AL A Y A+ +L+ LPD+ + SL ++ D Sbjct: 270 LLRGDLTEDAKLAEAVALMRAHPALAQASEDAARYAHDARATLQALPDTPARTSLADLCD 329 Query: 316 FCLQRLN 322 + R+ Sbjct: 330 AVVHRVG 336 >gi|326800486|ref|YP_004318305.1| geranyltranstransferase [Sphingobacterium sp. 21] gi|326551250|gb|ADZ79635.1| Geranyltranstransferase [Sphingobacterium sp. 21] Length = 324 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 87/233 (37%), Positives = 137/233 (58%), Gaps = 5/233 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + +KY + GGKRLRP+LTL A + + A AIE H TL+HDD++D++ LR Sbjct: 29 EPIKYFLAIGGKRLRPVLTLLAAELFGATIKEGLPAALAIEMFHNFTLMHDDIMDEAPLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQL 148 RG+ W T++L GD L +A+ ++ E K + E L+ + +A + EG+ + Sbjct: 89 RGRETIHKKWDINTAILSGDATLIRAYQLLAECKPELLAELLKVFNKMAQEVCEGQQLDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 K VTEE+YLH+I+ KT+VL AALE+ +++ G R L ++G+N+GIAFQL Sbjct: 149 DFEKLATVTEEEYLHMIRLKTSVLLGAALEIGAILGGADKQDRSNLYTFGVNIGIAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--RGTKREKNFWKSTIND 259 DD+LD G+ ++ GK +G D K T +I A Q +G+ +++ + IN+ Sbjct: 209 DDILDVYGDPSKFGKQVGGDIIENKKTYLLINALQLAKGSDKQELIHWTEINE 261 >gi|168046685|ref|XP_001775803.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672810|gb|EDQ59342.1| predicted protein [Physcomitrella patens subsp. patens] Length = 344 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 165/318 (51%), Gaps = 13/318 (4%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML-------TLATALMLEYRGDN 63 D+ +N + K + +D M+ K + +GGKR+RP L T + + E R Sbjct: 32 DLRLLNDNLQKIVGADNPMLMAAAKQIFGAGGKRMRPALVFLVSRATCQLSNIQELR-PQ 90 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H LA E IHTA+L+HDDV+D+S RRGK +G + +VL GDF+ +Q+ + Sbjct: 91 HRRLAEITEMIHTASLIHDDVLDESDTRRGKETVHQTFGTRVAVLAGDFMFAQSSWYLAN 150 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E ++ +S V A GE++Q + +VT ++YL KTA L +++ + +++ Sbjct: 151 LDNLEVIKLISQVIRDFASGEIKQAQNLFDTEVTLQNYLDKSYYKTASLIASSTKSAAIF 210 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + SV A+ YGM+LG+AFQ+VDD+LD+ ++GK G D G T PV+ A + Sbjct: 211 SDSTPSVSNAMFDYGMHLGLAFQVVDDILDFTQTSEQLGKPAGSDLSKGNLTAPVLFALE 270 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + + + I+ +L+ A ++ + A G AK SL CLP Sbjct: 271 KEPE-----LRDLIDTEFTEEGSLEAAIALVHRGGGIDRARTLAKEQGDLAKKSLECLPQ 325 Query: 304 SSWKKSLMEVVDFCLQRL 321 ++SL +VD+ L+R+ Sbjct: 326 GDTRRSLERMVDYVLERI 343 >gi|221134874|ref|ZP_03561177.1| Geranylgeranyl pyrophosphate synthase [Glaciecola sp. HTCC2999] Length = 188 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 84/179 (46%), Positives = 118/179 (65%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM++VN LI ++ SDV +I + Y++ SGGKRLRP+L + +A L Sbjct: 10 IKQLAHDDMQQVNQLIQTQVDSDVALIQQLGFYIVNSGGKRLRPLLCVLSAQALGITNQQ 69 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H LA IEFIHTATLLHDDVVD+S LRRG+ A ++GNQ SVLVGDFL S+AF M++E Sbjct: 70 HHHLAAIIEFIHTATLLHDDVVDESLLRRGRETANALFGNQASVLVGDFLYSRAFQMMVE 129 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + + + LS +A+GE+ QL + + TE+ Y VI SKTA LF AA +++++ Sbjct: 130 LDNMKVMRILSDATNRIAQGEVMQLMNVNDPNTTEQSYFDVIYSKTARLFEAATQLAAV 188 >gi|328950331|ref|YP_004367666.1| Geranyltranstransferase [Marinithermus hydrothermalis DSM 14884] gi|328450655|gb|AEB11556.1| Geranyltranstransferase [Marinithermus hydrothermalis DSM 14884] Length = 319 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 106/303 (34%), Positives = 162/303 (53%), Gaps = 11/303 (3%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLACAIEFIHTATLL 80 + SDVE I + L+ +GGKR+RP L L + L G + LA A+E +H+ATLL Sbjct: 25 VDSDVEFIRLIQDDLVTAGGKRIRPRLVLLASRAL---GGVPREMELALAVELLHSATLL 81 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VDD+ RRG+ AA +GN SVL GD+LLS+ ++ ET E + + VA L Sbjct: 82 HDDLVDDAETRRGREAAFRKYGNAVSVLSGDYLLSRVLYLLAETGRLELVRLFADVARQL 141 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 AEGE+ Q ++ + ++ +Y +I KTA L A E +L+A VR+AL+ +G Sbjct: 142 AEGEVFQFQVAALGEYSKANYERIIAGKTAALMRACTEGVALLADAAPMVREALRRFGYE 201 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW-KSTIND 259 G+ FQ+ DD LD G+ +GK +G D R GK TL + +R + + Sbjct: 202 YGMVFQMRDDYLDLMGDGQVLGKPVGGDVREGKVTLITLHLLERAAEEVGPILARRAAKP 261 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 G I+ L++ I A+V+ + ++A +L LPDS K L+E+ ++ Sbjct: 262 GDIA--RLRELAIATGAAEAVVEA---ITARAEQAVAALDPLPDSPAKAQLIELARSEVR 316 Query: 320 RLN 322 R+ Sbjct: 317 RVR 319 >gi|86739265|ref|YP_479665.1| polyprenyl synthetase [Frankia sp. CcI3] gi|86566127|gb|ABD09936.1| Polyprenyl synthetase [Frankia sp. CcI3] Length = 338 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 95/313 (30%), Positives = 158/313 (50%), Gaps = 5/313 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + +V L+ + + S+ + + ++L+ +GGKR RP++ L A + V A AI Sbjct: 25 LARVEDLLRESVRSESAFVTETSRHLVDAGGKRFRPIVVLLAAQFADPEAVGVVPAAVAI 84 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H +TL HDDV+D++ RRG +A W N ++L GD+L ++A + + EA Sbjct: 85 ELTHLSTLYHDDVMDEAPRRRGAASANTRWTNTVAILTGDYLFARASDITADL-GPEATR 143 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ TL EG++R+ E YL VI KTA L + + + +++AG Sbjct: 144 ILARTIATLCEGQIRETVGPAPGQDPVEHYLRVITDKTASLIATSGRLGAMLAGADPITV 203 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ---RGTKR 248 L ++G G+AFQL DD++D + + GK G D R G PTLPV+ A Q R R Sbjct: 204 DTLATFGELFGVAFQLSDDIIDVASDPVDSGKTPGTDLREGIPTLPVLYALQADDRAAGR 263 Query: 249 EKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + G + E+ + +A ++R + + S+ +A++ L LPD+ K Sbjct: 264 LRELITTGFAPGDGNTEDRVGEALDLLRGHVGMARARAELISWSSRARECLASLPDNPAK 323 Query: 308 KSLMEVVDFCLQR 320 +L + DF + R Sbjct: 324 TALESLADFVVDR 336 >gi|224023511|ref|ZP_03641877.1| hypothetical protein BACCOPRO_00213 [Bacteroides coprophilus DSM 18228] gi|224016733|gb|EEF74745.1| hypothetical protein BACCOPRO_00213 [Bacteroides coprophilus DSM 18228] Length = 324 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 93/292 (31%), Positives = 152/292 (52%), Gaps = 1/292 (0%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ +V+ Y+ GK +RP+L + A + + + + +A ++E +HTA+L+HDDVVD+S Sbjct: 32 LLGEVLSYIRKRNGKMMRPILVMLMAKLFGHINSSTLHVALSLELLHTASLVHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+ + V+ N+ SVLVGD++L+ + T E +E ++ + L+EGE+ QL Sbjct: 92 DERRGQSSVNAVYNNKISVLVGDYMLATSLWHAAHTGKVELVELVARLGQALSEGEIIQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + N D +E+ Y VI+ KTA LF+A+ E +L AG +G +GIAFQ+ Sbjct: 152 ANISNRDFSEDIYFDVIRKKTAALFTASAESGALSAGASEEEVSRAADFGEMIGIAFQIK 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+ DY E E+GK G D GK TLP + + I K S E + Sbjct: 212 DDIFDYY-ESPELGKPTGNDMLEGKLTLPALYVINKLNDESVRELALRIRALKASKEEIA 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +++ + E Y Y +A L D + + SL +D+ ++R Sbjct: 271 SFVELVKREGGIAHAEQVMYEYRNRALQLLPASADEALRLSLTAYIDYVIER 322 >gi|226227338|ref|YP_002761444.1| polyprenyl synthase [Gemmatimonas aurantiaca T-27] gi|226090529|dbj|BAH38974.1| polyprenyl synthase [Gemmatimonas aurantiaca T-27] Length = 334 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 94/311 (30%), Positives = 169/311 (54%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +++ +V+ + + + +DV ++ +V +L+ GK RP L L ++ + + A Sbjct: 24 EELSQVSGELWRIVAADVPLVREVQDHLMGMKGKLFRPTLLLLSSSIEGRSPKRAITFAA 83 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E +H ATL+HDD VD SALRRG ++ +Q SV++GDFL +A ++ EA Sbjct: 84 VVELMHLATLVHDDAVDHSALRRGMPTVNSLFSHQVSVIMGDFLYLRALRELVTIGDLEA 143 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + +++ + + GE+RQLS L E DY +I++KTA LF AA +V +L + Sbjct: 144 MRSITNASNEMTLGEIRQLSAYDALAFGESDYETLIRAKTATLFMAACDVGALSGAPR-- 201 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 R+A+ +G LG+AFQ+ DD+LDY + GK G D + K TLP+I A + Sbjct: 202 YREAVTRFGERLGMAFQVADDLLDYTEQQEMTGKPSGLDLKEHKVTLPLIAALREMPSSA 261 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + ++ + E + + I+R++ L RA + ++A+++L LP+ K + Sbjct: 262 RARVEALFASLEPEDEAIAEVVAIVRDHGGLEYARQRADQFSREAEEALADLPEGPAKTA 321 Query: 310 LMEVVDFCLQR 320 L++ + + ++R Sbjct: 322 LLDSIAYVVER 332 >gi|154151748|ref|YP_001405366.1| farnesyltranstransferase [Candidatus Methanoregula boonei 6A8] gi|154000300|gb|ABS56723.1| Farnesyltranstransferase [Methanoregula boonei 6A8] Length = 325 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 97/294 (32%), Positives = 160/294 (54%), Gaps = 19/294 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLLHDDVVDDSALRRGK 94 +L+ +GGKRLRP + + +A + + V+ A A+E HT TL+HDD++D +LRRG Sbjct: 40 HLLSAGGKRLRPAVVMLSADAIRHGSSKDVMPAALALEVTHTFTLIHDDIMDGDSLRRGV 99 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVA--CT-LAEGELRQLS 149 W T +L GD L ++AF + ++K+ E ++A++L+A C + EG+ + +S Sbjct: 100 PTVHTKWDMPTGILAGDVLYARAFEFICQSKADEGPKVQAVALLARACADICEGQHQDMS 159 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 DVTEE+Y+ ++ KT VL++AA + +AG +AL +G+N GIAFQ+ D Sbjct: 160 FEHRADVTEEEYMAMVAKKTGVLYAAAAAIGGTLAGGNPEQIRALYQFGLNTGIAFQIQD 219 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D++D + GK+ G D R GK TL +I+A Q+G K + + D K +++ L Sbjct: 220 DLIDLLTPTEKSGKDQGSDLREGKQTLVMIIARQKGVDLLKYRHELSPADIKAAIQELTD 279 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLR---CLPDSSWKKSLMEVVDFCLQR 320 A +I + D DS R LP + ++ +M+V +F + R Sbjct: 280 AGVIDAVKKKAADL----------VADSNRLLMVLPPTKERQLIMDVGEFFVTR 323 >gi|37912978|gb|AAR05310.1| predicted geranylgeranyl pyrophosphate synthase [uncultured marine gamma proteobacterium EB000-45B06] gi|40063209|gb|AAR38046.1| polyprenyl synthetase family protein [uncultured marine bacterium 562] Length = 316 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 100/317 (31%), Positives = 171/317 (53%), Gaps = 5/317 (1%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 ++L KD+++VN L+ K I + + I ++ Y+ GK+LR L+L + +G Sbjct: 4 KNLINKDLKEVNNLLRKNIIKE-KTISNLYAYIFKKNGKQLRARLSLIASSADRRQGKKR 62 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + LA IE +H ATL+HDDVVD+S RRG + +W N VL+GD++ S+AF +++E Sbjct: 63 LKLAAIIELLHNATLVHDDVVDESPTRRGVKSVNNIWTNAHGVLIGDYIYSKAFMLMVEL 122 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 + + LE LS +++GEL QL N ++ + + KT LF A+ + +L+ Sbjct: 123 GNSKILEELSNATNDISKGELIQLDAIANTGISLSELEDISYFKTGRLFEASAKCGALLC 182 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + S ++ NLGI FQ+ DD+LDY G+ + +GK +D + GK T P A+Q Sbjct: 183 NSKKSYVNSISECAKNLGIVFQIKDDLLDYLGKEDALGKPAFQDIKEGKVTYPFYFAYQN 242 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 +K + + + K+S + K + +I R + DTE A Y K K L D+ Sbjct: 243 ANSDDKKILSTMLGNKKVS--HSKVSNLIERLG-GINDTENLAIKYINKCK-VLAGKLDN 298 Query: 305 SWKKSLMEVVDFCLQRL 321 ++ +++++D + R+ Sbjct: 299 DLQQEMLKLLDSSINRI 315 >gi|319651348|ref|ZP_08005477.1| HepT protein [Bacillus sp. 2_A_57_CT2] gi|317396879|gb|EFV77588.1| HepT protein [Bacillus sp. 2_A_57_CT2] Length = 320 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 89/285 (31%), Positives = 156/285 (54%), Gaps = 4/285 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 +L+ +GGKR+RP+ L A EY D +A ++E IH A+L+HDDV+DD+ LRRG+ Sbjct: 38 HLLQAGGKRIRPVFVLLAAKFGEYDIDKIKNVAVSLELIHMASLVHDDVIDDAELRRGQP 97 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + W N+ ++ GD++ ++A ++ K+ A + LS L GE+ Q+ N D Sbjct: 98 TIKAKWDNKIAMYTGDYIFARALELITNIKNPHAHKILSHTLVELCIGEIEQIKDKYNYD 157 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 Y IK KTA+L + + ++ + A V+ + + L +G +G+++Q++DDVLD+ Sbjct: 158 QNIRTYFRRIKRKTAMLIAVSCQLGGIAANVEEDIHKKLFKFGYFVGMSYQIIDDVLDFV 217 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 G E+GK G D G TLP + A + ++ S +++G +++K +++ Sbjct: 218 GTEKELGKPAGGDLHQGNITLPALFAMEDSIICDQ---ISRVHEG-TERSDIEKIIALVK 273 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ A+ + + Y QKA L LP S KK+L ++ F +R Sbjct: 274 DSGAVEKSLQISDKYLQKALGVLEELPPSRSKKALRDIAKFIGKR 318 >gi|73668941|ref|YP_304956.1| dimethylallyltranstransferase / geranyltranstransferase [Methanosarcina barkeri str. Fusaro] gi|72396103|gb|AAZ70376.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Methanosarcina barkeri str. Fusaro] Length = 321 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 91/291 (31%), Positives = 157/291 (53%), Gaps = 11/291 (3%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +YL+ +GGKRLRP + + A + + A A+E +H TL+HDD++D +RRG Sbjct: 35 RYLVDAGGKRLRPAVLILAAEATGSDLKSVLPAAVAVELVHNFTLIHDDIMDKDDIRRGM 94 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTLAEGELRQLS 149 A +WG+ ++L GD L S+AF ++ + +++ A ++ +S + EG+ + Sbjct: 95 PAVHTIWGDAGAILAGDTLYSKAFEILSKVQNEPARILKCMDVISKTCTEICEGQWLDMD 154 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 K V++ +Y+ +++ KT+VL++AA ++ +L+ G + + AL YG +GI FQ+ D Sbjct: 155 FEKREKVSKAEYIEMVEKKTSVLYAAAAKIGALLGGASDEIAAALSEYGRFIGIGFQMYD 214 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 DVLD +GK G D GK TL VI AF++G K + G+ + E + Sbjct: 215 DVLDMVTPEEVLGKVRGSDLMEGKHTLIVIDAFEKGVKLD------IFGKGEATQEETDE 268 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A I+ E ++ + A SY + K L L D K+ L+++ D+ + R Sbjct: 269 AVRILTECGSIDYVKDLAISYINEGKAKLDVLRDCPEKELLLQIADYMISR 319 >gi|83815330|ref|YP_445348.1| polyprenyl synthetase [Salinibacter ruber DSM 13855] gi|294507229|ref|YP_003571287.1| Octaprenyl-diphosphate synthase [Salinibacter ruber M8] gi|83756724|gb|ABC44837.1| polyprenyl synthetase [Salinibacter ruber DSM 13855] gi|294343557|emb|CBH24335.1| Octaprenyl-diphosphate synthase [Salinibacter ruber M8] Length = 355 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 160/297 (53%), Gaps = 3/297 (1%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDD 83 SD ++ V +Y+++ GKR+RP+L L +A + A A +E +HTATL+HDD Sbjct: 59 SDHMLLDKVTQYVLWQKGKRIRPILVLLSAQACGGAATDQTHRAAALVELLHTATLVHDD 118 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 VVDD+ RRG + +W N+ +VL+GDFLLS+ + ++ L LS ++EG Sbjct: 119 VVDDAEERRGVFSINALWKNKIAVLLGDFLLSRGLLLSLDHDDYSVLHTLSDAVRRMSEG 178 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 EL Q+ S+ LD+ EE Y +I KTA L SA + ++ ++ + + +G LG+ Sbjct: 179 ELLQIEKSRLLDIDEETYFRIISDKTASLISACTKSGAVSVTDDEALIERMDEFGETLGL 238 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQ+ DD+ D+ E + GK IG D + K TLP+I+A + +REK + ++ + Sbjct: 239 AFQIRDDLFDFSAE--DAGKPIGIDLQEKKMTLPLIVALREAGRREKKRILAIVDQDEKD 296 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++L+ + E + + S A+ L LP S + SL + +F +QR Sbjct: 297 RDDLRTIADFVDEYGGIEHARRKMESLAADARSLLSALPPSEARASLAGLTEFAIQR 353 >gi|114324644|gb|ABI63627.1| solanesyl diphosphate synthase [Solanum lycopersicum] Length = 398 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 162/288 (56%), Gaps = 11/288 (3%) Query: 40 SGGKRLRPMLTL----ATALM--LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +GGKR+RP L ATA M L+ NH LA IE IHTA+L+HDDV+D+S RRG Sbjct: 115 AGGKRVRPALVFLVSRATAEMSGLKELTTNHRRLAEIIEMIHTASLIHDDVLDESDTRRG 174 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K ++G + +VL GDF+ +Q+ + ++ E ++ +S V A GE++Q S + Sbjct: 175 KETIHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASNLFD 234 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 DV ++YL KTA L +A+ + +++ + V + + + + YG NLG++FQ+VDD+LD Sbjct: 235 CDVGLDEYLLKSYYKTASLIAASTKGAAIFSEVGSDISEQMFQYGRNLGLSFQIVDDILD 294 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 + ++GK G D G T PV+ A ++ +N +S +D +L++A + Sbjct: 295 FTQSAAQLGKPAGSDLAKGNLTAPVLFALEK-EPNLRNIIESEFHDAG----SLEEAINL 349 Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++ + + A A +L+CLP S ++ +L E+V + L+R+ Sbjct: 350 VKSCGGIQRAQDLAKEKADLAMQNLKCLPSSPFQAALEEIVKYNLERI 397 >gi|297801684|ref|XP_002868726.1| hypothetical protein ARALYDRAFT_494049 [Arabidopsis lyrata subsp. lyrata] gi|297314562|gb|EFH44985.1| hypothetical protein ARALYDRAFT_494049 [Arabidopsis lyrata subsp. lyrata] Length = 417 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 174/318 (54%), Gaps = 11/318 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALM--LEYRGDNH 64 D++++N +L + ++ ++ + + +GGKR+RP L ATA + L+ H Sbjct: 105 DLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLKELTVEH 164 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 L IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +QA + Sbjct: 165 RRLGEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANL 224 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 ++ + ++ +S V A GE++Q S + DV +DYL KTA L +A+ + +++ + Sbjct: 225 ENLQVIKLISQVIKDFASGEIKQASSLFDCDVELDDYLLKSYYKTASLVAASTKGAAIFS 284 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V++ V + + +G NLG++FQ+VDD+LD+ ++GK D G T PVI A + Sbjct: 285 KVESEVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFALEN 344 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + + I +L++A I+R + + A G+ A +L CLP S Sbjct: 345 EPR-----LREIIESEFCEPGSLEEAIEIVRNRGGIKKAQELAKEKGELALKNLNCLPRS 399 Query: 305 SWKKSLMEVVDFCLQRLN 322 ++ +L ++V F L+R++ Sbjct: 400 GFRSALEDMVMFNLERID 417 >gi|332796336|ref|YP_004457836.1| farnesyltranstransferase [Acidianus hospitalis W1] gi|332694071|gb|AEE93538.1| farnesyltranstransferase [Acidianus hospitalis W1] Length = 326 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 105/322 (32%), Positives = 172/322 (53%), Gaps = 21/322 (6%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 ++ VN I K I + + + D YL+ +GGKRLRP++T+A++ + A A+ Sbjct: 11 IKNVNEEIEKYIKGEPKELYDASIYLLKAGGKRLRPLITVASSDLFSGDRKRAYKAAAAV 70 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H TL+HDD++D+ LRRG + WG ++L GD L ++AF ++ EALE Sbjct: 71 EILHNFTLIHDDIMDEDTLRRGMPTVHVKWGVPMAILAGDLLHAKAFEVL-----SEALE 125 Query: 132 AL------------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 L S +AEG+ + DVTEE+YL +IK KTA LFS + + Sbjct: 126 GLDSKRFYMGLSEFSKSVIIIAEGQAMDMEFENRQDVTEEEYLEMIKKKTAQLFSCSAFL 185 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 L++G ++ + LK +G+NLGIAFQ++DD+L + E+GK + D R GK T+ VI Sbjct: 186 GGLVSGAEDKDLELLKEFGLNLGIAFQIIDDILGLTADEKELGKPVYSDIREGKKTILVI 245 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A ++ E+ + G E + KA +++ + +L A Y QK+ +L Sbjct: 246 KALSLASEAERKIIIEGL--GSKDQEKIIKAAEVVK-SLSLNYAYEVAEEYYQKSMKALS 302 Query: 300 CLPDSSWK-KSLMEVVDFCLQR 320 + D++ K+L + +F ++R Sbjct: 303 AIGDNNIAGKALKYLAEFTIKR 324 >gi|283780902|ref|YP_003371657.1| polyprenyl synthetase [Pirellula staleyi DSM 6068] gi|283439355|gb|ADB17797.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068] Length = 349 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 89/310 (28%), Positives = 155/310 (50%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +M+ + + + S + ++V+Y GGKRLRP L L T L H+ LA Sbjct: 41 EMQLIEQRLRTELSSKHPFVDELVRYGCLLGGKRLRPALLLLTGKALGGITPAHLTLATV 100 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IHTATL+HDDV+D++ +RR W N++SVL+GD+L + AF + + Sbjct: 101 VEMIHTATLVHDDVLDEAKVRRHLATVNARWDNESSVLLGDYLFTHAFHLASTLDTVVGC 160 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + + EGEL Q N +T+ +Y +I+ KTA L + + + + + V Sbjct: 161 RVIGRATNIVCEGELLQKGSRGNFRLTQSEYFEIIEGKTAELTACSCYLGAHFSAASVEV 220 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +G +LGIAFQ+ DD+LD GE GK++G D KPTLP+I ++ + ++ Sbjct: 221 CDQMDGFGRDLGIAFQIADDLLDVLGEEKATGKSLGTDLEKQKPTLPLIYTLEKASSHDR 280 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 ++ ++K+ + + + +A Y ++A L LP+ + + +L Sbjct: 281 QELVEILSS---ESRDMKQILPFIIKYGGIEFAREQAIRYARRAAGRLEYLPNGNCRDTL 337 Query: 311 MEVVDFCLQR 320 + +F + R Sbjct: 338 QTMAEFVVSR 347 >gi|15678079|ref|NP_275193.1| bifunctional short chain isoprenyl diphosphate synthase [Methanothermobacter thermautotrophicus str. Delta H] gi|3334232|sp|O26156|IDSA_METTH RecName: Full=Bifunctional short chain isoprenyl diphosphate synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; AltName: Full=Geranyltranstransferase gi|2621086|gb|AAB84557.1| bifunctional short chain isoprenyl diphosphate synthase [Methanothermobacter thermautotrophicus str. Delta H] Length = 325 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 103/293 (35%), Positives = 165/293 (56%), Gaps = 12/293 (4%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 ++LI +GGK++RP L L ++ + + +A AIE IHT +L+HDD++DD +RRG+ Sbjct: 36 EHLITAGGKKIRPSLALLSSEAVGGDPGDAAGVAAAIELIHTFSLIHDDIMDDDEIRRGE 95 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLV--ACT-LAEGELRQLSL 150 A ++WG ++L GD L S+AF VI E + EAL++V +C + EG+ + Sbjct: 96 PAVHVLWGEPMAILAGDVLFSKAFEAVIRNGDSEMVKEALAVVVDSCVKICEGQALDMGF 155 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + LDVTEE+Y+ +I KTA L +AA + +++ G AL+ YG +G+AFQ+ DD Sbjct: 156 EERLDVTEEEYMEMIYKKTAALIAAATKAGAIMGGGSPQEIAALEDYGRCIGLAFQIHDD 215 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 LD + +GK +G D GK TL V+ A +R +++++ S + G E L Sbjct: 216 YLDVVSDEESLGKPVGSDIAEGKMTLMVVKALERASEKDRERLISILGSGD---EKLVAE 272 Query: 271 FIIMRENRALVDTEYR---AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I + E TEY A + + AK+ L L +S +++L + DF L+R Sbjct: 273 AIEIFERYGA--TEYAHAVALDHVRMAKERLEVLEESDAREALAMIADFVLER 323 >gi|253576413|ref|ZP_04853743.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844306|gb|EES72324.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 324 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 161/314 (51%), Gaps = 6/314 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KDM+ + + + I D +++ + +L+ +GGKRLRP+ L Y +A Sbjct: 12 KDMDFIERQLYRSIDGDDDLLSETSLHLLKAGGKRLRPVFVLLGGKFGNYDLQKLQYIAV 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IH+A+L+HDDV+DD+ RRGK + W N+ ++ GD++ ++A V E + Sbjct: 72 PLELIHSASLVHDDVIDDADTRRGKATVKSKWDNRIAMYTGDYIYAKALMQVSELANPYI 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ ++ GE+ Q+ N + + +YL I+ KTA+L + + ++ ++ A Sbjct: 132 HRILAKAMVQMSIGEMEQIRDFFNTEQSVRNYLLRIRRKTALLIAISCQLGAMAADAPAK 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L YG N+G+AFQ+ DD+LD G +GK G D R G TLPV+ A Q RE Sbjct: 192 VSALLYRYGYNVGMAFQIRDDLLDLFGTEKTIGKPPGSDMRQGNITLPVLYALQEPDLRE 251 Query: 250 ---KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + DG V +A ++R + + E A Y KA +L+ LPD++ Sbjct: 252 PLLREIRGIQAGDGSGDVS---RAIEMIRTSPGIGKAEALADRYIAKALAALQQLPDTAA 308 Query: 307 KKSLMEVVDFCLQR 320 + L ++ +F +R Sbjct: 309 RSHLQDIAEFVNKR 322 >gi|251796421|ref|YP_003011152.1| trans-hexaprenyltranstransferase [Paenibacillus sp. JDR-2] gi|247544047|gb|ACT01066.1| Trans-hexaprenyltranstransferase [Paenibacillus sp. JDR-2] Length = 324 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 96/313 (30%), Positives = 166/313 (53%), Gaps = 6/313 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM ++ + + I E++ + +L+ +GGKRLRP+ L +Y D +A Sbjct: 13 DMSRIEQELERSISFGDELLSETSLHLLKAGGKRLRPVFVLLAGKFGQYDLDKLTKVAVP 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ++L+HDDV+DD++ RRG++ + W N+ ++ GD++ +A +V E Sbjct: 73 LELIHMSSLVHDDVIDDASTRRGQLTVKSKWDNRIAMYTGDYIFGRALTIVTELDDPFIH 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS ++ GE+ Q+ N + T DYL I+ KTA+L + + ++ + AG + Sbjct: 133 QMLSKSLVQMSIGEMEQIRYFFNTEQTIRDYLLRIRRKTALLIAISCQLGAAAAGADRAT 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L YG N+G+ FQ+ DD+LD G ++GK G D R G TLPVILA + RE Sbjct: 193 LNRLYRYGYNVGMTFQIRDDMLDLFGTEKQIGKPPGSDIRQGNITLPVILALKDDKVREP 252 Query: 251 NFWKSTI---NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + I ++G + + K A +++ ++ + + A Y +KA +L LP K Sbjct: 253 LLEQIRIIREHNGNV---DTKPAISLIKSSKGIQLADQLANDYIKKALAALEGLPSIGAK 309 Query: 308 KSLMEVVDFCLQR 320 K+L+++ F +R Sbjct: 310 KNLIDIAHFVGKR 322 >gi|150399805|ref|YP_001323572.1| polyprenyl synthetase [Methanococcus vannielii SB] gi|150012508|gb|ABR54960.1| Polyprenyl synthetase [Methanococcus vannielii SB] Length = 317 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 98/294 (33%), Positives = 160/294 (54%), Gaps = 12/294 (4%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI--EFIHTATLLHDDVVDDSALRR 92 K+L+F+GGKR+RP L++ T L+ R D +LA AI E IH TL+HDD++D+ RR Sbjct: 30 KHLLFAGGKRIRPYLSVLTYLL--KRDDISEVLAPAISVELIHNYTLIHDDIMDNDDERR 87 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACTLAEGELRQL 148 GK +V+G T++L GD L ++AF + K+ E L+ LS + EG+ + Sbjct: 88 GKPTVHIVYGEPTAILAGDLLYAKAFEALSNIGDSKKALEVLKVLSKACVEVCEGQTDDM 147 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 EE YL +I KT L A +E+ +++A + R+AL +Y +G+ FQ+ Sbjct: 148 EFENEFPTLEE-YLSMISKKTGALIVAPIEIGAIMAECSSEEREALYNYAKRIGMTFQIQ 206 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DDVLD G+ +GK +G D GK T+ VI A + +K + + S E + Sbjct: 207 DDVLDLIGDQKTIGKPVGSDILEGKKTIIVIHAIENLPNDKKERLLQILGNKNASKEEIA 266 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +A +I+ ++ V + + +AK+ L+ DS +K+L +V DF ++R++ Sbjct: 267 EAIVILSDSIEYVKDIMKNAT--NEAKECLKIF-DSERRKNLEKVADFIIERIH 317 >gi|90200410|gb|ABD92707.1| solanesyl diphosphate synthase [Hevea brasiliensis] Length = 418 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 159/289 (55%), Gaps = 11/289 (3%) Query: 40 SGGKRLRPMLTL----ATA--LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +GGKR+RP L ATA + L+ H LA IE IHTA+L+HDDV+D+S +RRG Sbjct: 135 AGGKRMRPALVFLVSRATAEIVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESNMRRG 194 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K ++G + +VL GDF+ +Q+ + ++ E ++ +S V A GE++Q S + Sbjct: 195 KQTVHQLYGTRVAVLAGDFMFAQSSWYLANLENIEVIKLISQVIKDFASGEIKQASSLFD 254 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 DV E+YL KTA L +A+ + +++ +GV +SV + + YG NLG++FQ+VDDVLD Sbjct: 255 CDVELEEYLIKSYYKTASLIAASTKGAAIFSGVDSSVAEQMYEYGKNLGLSFQVVDDVLD 314 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 + ++GK G D G T PVI A ++ K + I +L +A + Sbjct: 315 FTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPK-----LREIIESEFCETGSLDEAVEL 369 Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +++ + + A A +L CLP ++ L E+V + L+R++ Sbjct: 370 VKQCGGIERAQELAKEKADLAIQNLNCLPRGVFQSHLKEMVLYNLERID 418 >gi|218294793|ref|ZP_03495647.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23] gi|218244701|gb|EED11225.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23] Length = 315 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 165/289 (57%), Gaps = 8/289 (2%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACAIEFIHTATLLH 81 + S+V + + + L+ +GGKR+RP L LA+ + + LA A+E +H+ATLLH Sbjct: 22 VRSEVLFVRLIHQDLVTAGGKRIRPRLVFLASGAV--GGAPFELELALAVELLHSATLLH 79 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DD++D++ LRRGK AA +GN SVL GDFLLS+ +V +T S E +EA + A LA Sbjct: 80 DDLIDEAELRRGKEAAYRRYGNAVSVLSGDFLLSRLLHVVAKTGSLELVEAFAETARVLA 139 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 EGE+ Q ++ D + E+Y +I +KTA L + A E +L+ G++ + R+AL+ +G+ Sbjct: 140 EGEVLQFQVAALEDYSLENYERIITAKTAALMALATEGPALLKGLKGAWREALRRFGLLY 199 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G AFQ+ DD LD G +GK +G D R GK TL +L +R + + G Sbjct: 200 GQAFQMRDDYLDLMGSPEALGKPVGGDVREGKATLLTLLLMERFPEVRAILKRRGGEAG- 258 Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 +L++ + RE+ + E R A ++L LPDS +K++L Sbjct: 259 ----DLERLRALARESGVAEEVEARIRERALLAAEALDPLPDSPYKEAL 303 >gi|298372664|ref|ZP_06982654.1| octylprenyl diphosphate synthase [Bacteroidetes oral taxon 274 str. F0058] gi|298275568|gb|EFI17119.1| octylprenyl diphosphate synthase [Bacteroidetes oral taxon 274 str. F0058] Length = 323 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 90/293 (30%), Positives = 161/293 (54%), Gaps = 2/293 (0%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ + ++YL+ GK++RP+L + A + D+ L+A A E +H+A+L+HDDV+D+ Sbjct: 31 ELLHNALQYLMPQKGKQIRPILVILGAKLCGEVTDDTYLIAAAYELLHSASLIHDDVIDN 90 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S RR K + ++ N+TSVLVGD+L++++F + T E + L ++ + GEL Q Sbjct: 91 SLQRRNKPSLNKIFDNKTSVLVGDYLMTKSFNYIYHTYKMEQIGLLQKLSIDIIRGELLQ 150 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 S ++ E++Y VIK+KTA LF+ L+ +L A + S G NLG+ FQ+ Sbjct: 151 QQYSHSI-PKEKEYYSVIKNKTAALFATCLQAGALSANGTTQQLDDMYSIGENLGMCFQI 209 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DD+ DY + +GK I D GK TLP++ A + ++E+ +N + +++ Sbjct: 210 KDDIFDYSANAS-LGKPIFNDITEGKVTLPLLHAVRSADEKERINVIDILNKDNVDIDDK 268 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + I+ + + + +E + + + A + L DS +K L ++ F R Sbjct: 269 TFIYNIVTKYKGIDYSERKMKDFCRLALEKLDVFEDSEYKTFLSGIISFTADR 321 >gi|194016766|ref|ZP_03055379.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus ATCC 7061] gi|194011372|gb|EDW20941.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus ATCC 7061] Length = 320 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 92/301 (30%), Positives = 160/301 (53%), Gaps = 10/301 (3%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SD ++ + +L+ +GGKR+RP+ L + + +Y + +A A+E IH A+L+HD Sbjct: 25 VRSDYALLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVALELIHMASLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ LRRGK + W N+ ++ GD++ +++ + + A E LS + L Sbjct: 85 DVIDDAELRRGKPTIKAKWDNRIAMYTGDYMFARSLEYMTKINHPMAHEILSKMVVELCL 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ N+D YL IK KTA+L + + ++ ++ AG +AL +G +G Sbjct: 145 GEIEQVKDKYNMDQNLRTYLRRIKRKTALLIAGSCQLGAIAAGTDEKTHKALYWFGYYVG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT-KREKNFWKSTINDGK 261 +++Q++DDVLD+ E+GK +G D G TLPV+ A + T + + S + + Sbjct: 205 MSYQIIDDVLDFTSTEEELGKPVGGDLLQGNVTLPVLYALKNPTLEGQLKLINSETTETQ 264 Query: 262 IS--VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 + +E+LK+ I R R + Y +KA + L LP K SL + + + Sbjct: 265 LKPVIEHLKQTDAIDRSIRV-------SEMYLKKAFEQLDKLPRGRAKTSLASIAKYIGK 317 Query: 320 R 320 R Sbjct: 318 R 318 >gi|325299489|ref|YP_004259406.1| Trans-hexaprenyltranstransferase [Bacteroides salanitronis DSM 18170] gi|324319042|gb|ADY36933.1| Trans-hexaprenyltranstransferase [Bacteroides salanitronis DSM 18170] Length = 324 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 103/316 (32%), Positives = 164/316 (51%), Gaps = 11/316 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +++ + L + S M+ DV+ Y+ GK +RPML + A + + A Sbjct: 13 RELSEFKMLFDATLTSTAPMLGDVLGYIRNRNGKMMRPMLVMLMAKLYGVVNPATLHSAL 72 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 ++E +HTA+L+HDDVVD S RRG+ + ++ N+ SVLVGD++L+ + TK E Sbjct: 73 SLELLHTASLVHDDVVDKSDKRRGQASVNALYDNRVSVLVGDYMLATSLRHAAYTKEIEL 132 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI--AGVQ 187 ++ ++ + L+EGE+ QL+ + N D +EE Y VI+ KTA LF+A+ E +L A + Sbjct: 133 VDLVARLGQNLSEGEIVQLANTNNTDFSEEIYFDVIRKKTAALFTASAESGALSVKASAE 192 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + AL +G +GIAFQ+ DD+ DY E E+GK G D GK TLP + Sbjct: 193 DVDNAAL--FGEMIGIAFQIKDDIFDY-FENEELGKPTGNDMLEGKLTLPALYVLNEKAD 249 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP---DS 304 +EK I K S E + +++ + + + Y KA L LP D Sbjct: 250 KEKRELALRIRSLKASHEEIASFVSYVKQEGGIEHADKVMHDYRNKA---LALLPEQMDD 306 Query: 305 SWKKSLMEVVDFCLQR 320 S + +L VD+ ++R Sbjct: 307 SLRMALTAYVDYVVER 322 >gi|311897904|dbj|BAJ30312.1| putative polyprenyl diphosphate synthase [Kitasatospora setae KM-6054] Length = 337 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 147/308 (47%), Gaps = 5/308 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 ME V +++ + SDV I +LI +GGKR RP+L + A + V A + Sbjct: 24 MEAVEAALIEAVKSDVPFITVTASHLIEAGGKRFRPLLVMLAAQFGDPTAPGVVPSAVVV 83 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D++ +RRG +A W N ++L GDFL S+A V+ EA+ Sbjct: 84 ELTHLATLYHDDVMDEAPVRRGAPSANSRWDNSVAILTGDFLFSRA-SQVLSDLGTEAVR 142 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 S L G++ + + + D YL VI KT L + A SL+AG + + Sbjct: 143 IQSDAFERLVTGQILETAGPRPEDDPLRHYLDVISGKTGSLIAVACRFGSLMAGAERWIV 202 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK- 250 L YG +G AFQL DDVLD + +E GK G D R G PTLPV++ Q + Sbjct: 203 DLLTQYGERIGTAFQLADDVLDIASDGHESGKTPGTDLREGVPTLPVLMLRQTPADPDDP 262 Query: 251 ---NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + D +A ++R + AL Y ++A+ L LPD K Sbjct: 263 EDVRLRELLDTDLAADDAAHAEALRLLRRHPALERARRETLRYAEEARALLDTLPDCPAK 322 Query: 308 KSLMEVVD 315 +L E+ D Sbjct: 323 AALQELCD 330 >gi|333029492|ref|ZP_08457553.1| Trans-hexaprenyltranstransferase [Bacteroides coprosuis DSM 18011] gi|332740089|gb|EGJ70571.1| Trans-hexaprenyltranstransferase [Bacteroides coprosuis DSM 18011] Length = 324 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 161/288 (55%), Gaps = 3/288 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++++ S GK +RP+L L A + N + A ++E +HTA+L+HDDVVD+S RRG Sbjct: 37 IRHIRKSNGKMMRPILVLLLAKLFGSIKTNTLYSAVSLELLHTASLVHDDVVDESDERRG 96 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 +++ ++ N+ SVLVGDFLL+ + V T+ + ++ ++ + LA+GE+ QLS N Sbjct: 97 QLSVNALFNNKVSVLVGDFLLATSLVQVGLTRDCDIIDVVAHLGQNLADGEILQLSNVSN 156 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV-QNSVRQALKSYGMNLGIAFQLVDDVL 212 + +E+ Y VI KTA LF+A +V++L AG + SV +A K +G LGI FQ+ DD+ Sbjct: 157 KEFSEDVYYSVIYKKTAALFAACAKVAALSAGASKESVIEATK-FGEYLGICFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY + + +GK G D GK TLP + + E I G+ S+ + K Sbjct: 216 DY-SDSSSIGKPTGNDMLEGKLTLPALYVLNKTNSEEIKELAFRIKGGEASLHEIHKFIG 274 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + ++ + E SY KA + + LP++ K +L +D+ + R Sbjct: 275 YVIDHGGIEYAESVMLSYRDKALEVIAPLPNNEIKDALKCYLDYIVLR 322 >gi|320009184|gb|ADW04034.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331] Length = 336 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 159/314 (50%), Gaps = 8/314 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + V +L S+V I + ++L+ +GGKR RP+L + + + V A + Sbjct: 24 LAAVEAGLLDATKSEVPFITEAAQHLVSAGGKRFRPLLVMLASQFGDPDAPGVVPSAVVV 83 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A ++ EA+ Sbjct: 84 ELTHLATLYHDDVMDEADVRRGVDSANTRWGNSVAVLTGDFLFARA-SHILADLGPEAVR 142 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + L G++ + + ++ + Y+ V+ KT L + + +L+AG SV Sbjct: 143 IQAEAFERLVTGQILETAGPRDGRDPVDHYMDVLGGKTGSLVAVSGRFGALMAGADESVV 202 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL----AFQRGTK 247 L YG LGIAFQL DDVLD + +E GK G D R G PTLPV+ A G+ Sbjct: 203 DILTQYGERLGIAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLHLRARAAAGGSP 262 Query: 248 REKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +K + + DG ++ + L +A +R + AL Y Q+A+ +L LP+ Sbjct: 263 EDKELVE--LLDGDLADDARLAEALRRLRAHPALEQARRDTVRYAQEARATLAPLPECYA 320 Query: 307 KKSLMEVVDFCLQR 320 K +L E+ D + R Sbjct: 321 KAALEELCDAVVHR 334 >gi|167764030|ref|ZP_02436157.1| hypothetical protein BACSTE_02413 [Bacteroides stercoris ATCC 43183] gi|167698146|gb|EDS14725.1| hypothetical protein BACSTE_02413 [Bacteroides stercoris ATCC 43183] Length = 324 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 91/288 (31%), Positives = 155/288 (53%), Gaps = 1/288 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+ ++ GK +RP+L L A + + A A+E +HTA+L+HDDVVD+S RR Sbjct: 36 VIAHIRQKNGKMMRPILVLLAAKLYNEICPATLHAAVALELLHTASLVHDDVVDESTERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ V+ N+ +VL GD+LL+ A V T++ ++ +S + LAEGEL QLS Sbjct: 96 GQLSVNAVFNNKVAVLTGDYLLATALVEVGMTRNYGIIDIVSKLGQDLAEGELLQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N + +E+ Y VI+ KTAVLF+A ++ +L G + + + +G +G+ FQ+ DD+ Sbjct: 156 NPEYSEDIYFDVIRKKTAVLFAACMKAGALSVGAGDEKAEYARLFGEYIGLCFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E E+GK G D GK TLP + A ++ + + G + + + + Sbjct: 216 DYY-ESKEIGKPTGNDMLEGKLTLPALYALNSTRDKQAQEIAAKVKSGTATTDEIARLIE 274 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + N + + +KA L + D+ KK+L+ +D+ ++R Sbjct: 275 FSKANGGIEYATKVMIEFKEKALSLLASMEDTDVKKALVCYLDYVVER 322 >gi|255659210|ref|ZP_05404619.1| heptaprenyl diphosphate synthase component II [Mitsuokella multacida DSM 20544] gi|260848662|gb|EEX68669.1| heptaprenyl diphosphate synthase component II [Mitsuokella multacida DSM 20544] Length = 319 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 104/320 (32%), Positives = 166/320 (51%), Gaps = 10/320 (3%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D+ D+E + + + + S E++ +V +L+ SGGKR+RP L L +A + HV Sbjct: 3 DVIKGDLEILEQGLQEAVTSTNELVTEVGMHLVTSGGKRIRPALCLLSARGGKAFDLPHV 62 Query: 66 L-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 L LA A+E IHTA+L+HDDV+D++ RRG A W NQ ++L GD++ ++AF ++ E Sbjct: 63 LPLAEALELIHTASLVHDDVIDEADTRRGAATANARWNNQVAILSGDYIFARAFALLAEA 122 Query: 125 KSQE-ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + L+ L+ + C L+ GE+ Q DY I+ KTA E+ L+ Sbjct: 123 GYGDYVLKRLAELVCNLSVGEIIQDHAIYQASRGMADYFERIQKKTADFLEICCELGGLV 182 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+ L YG +G+AFQ+ DD+LD ++GK G D R G TLPVI A + Sbjct: 183 GGMDREEAGKLAEYGHCIGMAFQITDDLLDIEQTTEKIGKPAGNDIRQGIVTLPVIRALE 242 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 T + ++ + D +++ E +++A I++ + + +A Y AK LPD Sbjct: 243 --TSPDAKELEAIVTDMEMTDEMVERALAIVKATDGVDFAKAKADEYLAHAK---AVLPD 297 Query: 304 S---SWKKSLMEVVDFCLQR 320 S ++S V DF R Sbjct: 298 SLPADIRESYEMVADFIGDR 317 >gi|329929813|ref|ZP_08283489.1| putative heptaprenyl diphosphate synthase component II [Paenibacillus sp. HGF5] gi|328935791|gb|EGG32252.1| putative heptaprenyl diphosphate synthase component II [Paenibacillus sp. HGF5] Length = 324 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 164/317 (51%), Gaps = 12/317 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KDM+ + + + D + + +L+ +GGKRLRP+ L +Y D +A Sbjct: 12 KDMDVIERELYLSVEGDSPELTETSLHLLRAGGKRLRPVFVLMGGKFGDYDIDKLKHVAV 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IH+A+L+HDDV+DD+ RRGK + W N+ ++ GD++ +A + K E Sbjct: 72 PLELIHSASLVHDDVIDDADTRRGKPTVKAKWDNRIAMYTGDYIYGKALQLTTHLKQPEI 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEED---YLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ ++ GE+ Q+ ++ TE+D YL I+ KT++L + + ++ +L A Sbjct: 132 HQILAKAMVEMSIGEMEQI---RDFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGALAADA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 V +L +G N+G+AFQ+ DD+LD G ++GK G D R G TLPVI A + Sbjct: 189 DRKVANSLYRFGYNVGMAFQIQDDLLDLCGTEKQIGKPPGSDMRQGNITLPVIFALEDSQ 248 Query: 247 KRE---KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 +RE + + +G+ V A ++ + + +E A Y KA +L LPD Sbjct: 249 RREPLLQELERIHALNGQCDVSG---AVKLVTSSEGISRSEALADRYIGKALAALDTLPD 305 Query: 304 SSWKKSLMEVVDFCLQR 320 KK L ++ +F +R Sbjct: 306 IKTKKQLRDIANFITKR 322 >gi|239980128|ref|ZP_04702652.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291451984|ref|ZP_06591374.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291354933|gb|EFE81835.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 336 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 100/316 (31%), Positives = 153/316 (48%), Gaps = 12/316 (3%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M V +L+ S+V I D ++L+ +GGKRLRP+L + A + V + Sbjct: 24 MAAVEAGLLEATKSEVSFITDAAQHLLKAGGKRLRPLLVMLAAQFGDPDAPGIVPSGVVV 83 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D++ +RRG +A W N +VL GDFL ++A ++ EA+ Sbjct: 84 ELTHLATLYHDDVMDEAEVRRGVPSANARWDNSVAVLTGDFLFARA-SHILADLGPEAVR 142 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + L G++ + + ++ + YL V+ KT L + A ++++G V Sbjct: 143 VQAEAFERLVTGQIMETAGPRDGRDPVDHYLDVLGGKTGSLIAVAGRFGAMMSGADERVV 202 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L YG LG+AFQL DDVLD + +E GK G D R PTLPV+L R + E+ Sbjct: 203 DILTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLRESVPTLPVLLLRDRARREERP 262 Query: 252 -------FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 S + D E A MR + AL Y ++A+ +L L + Sbjct: 263 EDLALVALLDSDLTDDARHAE----ALAAMRAHPALEQARRETVRYAEEARAALTPLREC 318 Query: 305 SWKKSLMEVVDFCLQR 320 S K +L+E+ D + R Sbjct: 319 SAKAALVELCDAVVHR 334 >gi|261406049|ref|YP_003242290.1| trans-hexaprenyltranstransferase [Paenibacillus sp. Y412MC10] gi|261282512|gb|ACX64483.1| Trans-hexaprenyltranstransferase [Paenibacillus sp. Y412MC10] Length = 324 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 164/317 (51%), Gaps = 12/317 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KDM+ + + + D + + +L+ +GGKRLRP+ L +Y D +A Sbjct: 12 KDMDVIERELYLSVEGDSPELTETSLHLLRAGGKRLRPVFVLMGGKFGDYDIDKLKHVAV 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IH+A+L+HDDV+DD+ RRGK + W N+ ++ GD++ +A + K E Sbjct: 72 PLELIHSASLVHDDVIDDADTRRGKPTVKAKWDNRIAMYTGDYIYGKALQLTTHLKQPEI 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEED---YLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ ++ GE+ Q+ ++ TE+D YL I+ KT++L + + ++ +L A Sbjct: 132 HQILAKAMVEMSIGEMEQI---RDFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGALAADA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 V +L +G N+G+AFQ+ DD+LD G ++GK G D R G TLPVI A + Sbjct: 189 DRKVANSLYRFGYNVGMAFQIQDDLLDLCGTEKQIGKPPGSDMRQGNITLPVIFALEDSQ 248 Query: 247 KRE---KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 +RE + + +G+ V A ++ + + +E A Y KA +L LPD Sbjct: 249 RREPLLQELERIHALNGQCDVSG---AVKLVTSSEGISRSEALADRYIGKALAALDTLPD 305 Query: 304 SSWKKSLMEVVDFCLQR 320 KK L ++ +F +R Sbjct: 306 IKTKKQLKDIANFITKR 322 >gi|119490906|ref|ZP_01623189.1| solanesyl diphosphate synthase [Lyngbya sp. PCC 8106] gi|119453724|gb|EAW34883.1| solanesyl diphosphate synthase [Lyngbya sp. PCC 8106] Length = 323 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 100/322 (31%), Positives = 168/322 (52%), Gaps = 23/322 (7%) Query: 18 LILKRICSDVEMIPDVVKYLI--------------FS-GGKRLRPMLTL---ATALMLEY 59 L+ + +D++++ D +K L+ FS GKR+RP + L T + + Sbjct: 6 LLFSPVETDLQLLTDNLKQLVGARHPILYAAAEHLFSVHGKRVRPAIVLLISRTTMPNQE 65 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 H LA E IHTA+L+HDDVVD+S LRRG ++ N+ +VL GDFL +Q+ Sbjct: 66 ITPKHRRLAEITEMIHTASLVHDDVVDESELRRGSPTVHSLFNNRIAVLAGDFLFAQSSW 125 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + E ++ LS V LAEGE++Q + ++ YL KTA L + + + Sbjct: 126 YLANLDNLEVVKLLSKVIMDLAEGEIQQGLNRFDTGMSINAYLEKSYYKTASLVANSSKA 185 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + L++GV + + L SYG NLG+AFQ+VDD+LD+ G +GK D ++G T P + Sbjct: 186 AGLLSGVSAELAEDLYSYGQNLGLAFQIVDDILDFTGSTETLGKPAASDLKSGNLTAPTL 245 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + E + +G +L++A +++E+ A+ + A + + A + + Sbjct: 246 FTLEETPSLEALIEREFAQEG-----DLEQAITLIKESSAIQRSRELAAHHAKLAVEHIS 300 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 PD +K+L+E+ D+ L RL Sbjct: 301 KFPDCDSRKALIELSDYVLSRL 322 >gi|329956361|ref|ZP_08296958.1| polyprenyl synthetase [Bacteroides clarus YIT 12056] gi|328524258|gb|EGF51328.1| polyprenyl synthetase [Bacteroides clarus YIT 12056] Length = 324 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 90/288 (31%), Positives = 155/288 (53%), Gaps = 1/288 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+ ++ GK +RP+L L A + + A A+E +HTA+L+HDDVVD+S RR Sbjct: 36 VIAHIRQKNGKMMRPILVLLAAKLYNEICPATLHAAVALELLHTASLVHDDVVDESTERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VL GD+LL+ A V T++ ++ +S + LAEGEL QLS Sbjct: 96 GQLSVNAIFNNKVAVLTGDYLLATALVEVGMTRNYAIIDVVSNLGQDLAEGELLQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N + +E+ Y VI+ KTAVLF+A ++ +L G + + + +G +G+ FQ+ DD+ Sbjct: 156 NPEYSEDIYFDVIRKKTAVLFAACMKAGALSVGASDEKAEYARLFGEYIGLCFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E E+GK G D GK TLP + A ++ + +G + + + Sbjct: 216 DYY-ESKEIGKPTGNDMLEGKLTLPALYALNSTHDKQAKEIAVKVKNGTATTGEIARLIE 274 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +E+ + + +KA L + D+ KK+L+ +D+ ++R Sbjct: 275 FTKEHGGIEYATKVMVEFKEKALSLLASMEDTDVKKALVCYLDYVVER 322 >gi|74100796|gb|AAZ99642.1| isoprenyl diphosphate synthase [Streptomyces sp. Tu4128] Length = 336 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 160/305 (52%), Gaps = 4/305 (1%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ S+V I + ++L+ +GGKR RP+L + +A + V A +E H AT Sbjct: 31 LLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++A+RRG +A + W N +VL GDFL ++A ++ EA+ +L Sbjct: 91 LYHDDVMDEAAVRRGVASANVRWDNSVAVLTGDFLFARA-SQILADLGPEAVRVQALAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + + ++++G +V L YG Sbjct: 150 RLVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGAMMSGADETVVHVLTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK--REKNFWKST 256 LG+AFQL DDVLD + +E GK G D R G PTLPV+ +R + ++ S Sbjct: 210 ERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRLRERAARLGLAEDVALSE 269 Query: 257 INDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + D +S + +A ++R + AL Y ++A+ +L L + K +L+E+ D Sbjct: 270 LLDSDLSDDARHAEALRLLRAHPALEHARRDTVRYAKEARAALAPLRECEAKAALVELCD 329 Query: 316 FCLQR 320 + R Sbjct: 330 AVVHR 334 >gi|332708306|ref|ZP_08428286.1| solanesyl diphosphate synthase [Lyngbya majuscula 3L] gi|332352910|gb|EGJ32470.1| solanesyl diphosphate synthase [Lyngbya majuscula 3L] Length = 323 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 162/291 (55%), Gaps = 10/291 (3%) Query: 35 KYLIFSGGKRLRPMLTL--ATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKRLRP + L + A + + H LA E IHTA+L+HDDV+D+S +R Sbjct: 38 EHLFGAGGKRLRPAIVLLVSRATITNSKITPRHRRLAEITEMIHTASLVHDDVIDESDVR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 R ++ N+ +VL GDFL Q+ + + E ++ LS V +AEGE++Q LS Sbjct: 98 RTVPTVNSLFNNRIAVLAGDFLFGQSAWYLANLDNLEVVKLLSEVIKDMAEGEIQQ-GLS 156 Query: 152 K-NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + + T E YL +KTA L + + + + ++GV + V + L YG NLG+AFQ+VDD Sbjct: 157 RFDTTTTIEGYLAKTYNKTASLMANSAKAAGCLSGVSDQVAENLYHYGRNLGLAFQIVDD 216 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 +LD+ + +GK G D +G T PV+ A + EK + + I E+ ++A Sbjct: 217 ILDFTASTDVLGKPAGSDLVSGNLTAPVLFALE-----EKPYLEVLIEREFAQPEDKEQA 271 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++R+++ + + A Y Q A ++ L S K++L+++ D+ L RL Sbjct: 272 LALVRDSKGIQRSREMAAKYAQAAVKNISVLKPSESKQALIDLSDYVLSRL 322 >gi|254173046|ref|ZP_04879720.1| bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sp. AM4] gi|214033202|gb|EEB74030.1| bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sp. AM4] Length = 343 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 101/335 (30%), Positives = 168/335 (50%), Gaps = 32/335 (9%) Query: 17 FLILKRICSDV-----EMIPD--------VVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 F +K + DV E++P+ ++ +GGKR+RP + L A + + Sbjct: 8 FTRIKNLAKDVDKIILELVPEKDPKKLYEAARHYPLAGGKRVRPFVVLRAAEAVGGDPEK 67 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----- 118 + A A+EFIH +L+HDD++D LRRG+ VWG ++L GD L S+AF Sbjct: 68 ALYPAAAVEFIHNYSLVHDDIMDMDELRRGRPTVHKVWGVNMAILAGDLLFSKAFEAIAK 127 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 V K LE L + L EG+ + +VT ++YL +I KT LF + Sbjct: 128 AEVSPEKKARILEVLVKTSNELCEGQALDIEFETKDEVTVDEYLKMISGKTGALFDGSAT 187 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + +++ +AL +G N+GIAFQ+ DDVLD + ++GK +G D R GK TL V Sbjct: 188 IGAIVGTDNEEYIRALSKWGRNVGIAFQIWDDVLDLIADEEKLGKPVGSDIRKGKKTLIV 247 Query: 239 ILAFQRGTKREK-NFWK------------STINDGKISVENLKKAFIIMRENRALVDTEY 285 FQ ++ +K F K + I+D K+ E + KA ++++ ++ Sbjct: 248 SHFFQHASEEDKAEFLKVFGKYAGDAKGDALIHDEKVK-EEVAKAIELLKKYGSIDYAAN 306 Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A + ++A ++L+ LP+S +K L + +F ++R Sbjct: 307 YAKNLVKEANEALKILPESEARKDLELLAEFLVER 341 >gi|326790007|ref|YP_004307828.1| trans-hexaprenyltranstransferase [Clostridium lentocellum DSM 5427] gi|326540771|gb|ADZ82630.1| Trans-hexaprenyltranstransferase [Clostridium lentocellum DSM 5427] Length = 321 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 158/298 (53%), Gaps = 7/298 (2%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C D ++I +K +I S GK +RP ++ A EY + +LA +EF H ATL+HDD Sbjct: 28 CKD-KVIESSIKDMIHSNGKMIRPGFSIIAAKFGEYEEERTRVLAAVMEFFHMATLVHDD 86 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 V+DD+ LRRGK + +G +V +GD+L F ++ T S ++++ S + G Sbjct: 87 VIDDAKLRRGKETVQSKYGKDYAVYIGDYLFCICFKLLASTASLQSIQIDSKAMSRICLG 146 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 E+ QL+ + +V+ ++YL + KTA LFS +L + + + + + + G N+G+ Sbjct: 147 EVEQLNSRFDKNVSVKNYLKRVSGKTAELFSLSLYIGAAESNCDKKLSRLFWNIGHNIGM 206 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI- 262 AFQ++DD+LDY + N +GK+ D ++G TLP+I ++ K TI D +I Sbjct: 207 AFQIIDDILDYVSDTNTLGKDSANDLKDGLYTLPLIYVLEKQPKE-----LLTILDKEIY 261 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E++ F + E + A Y KA + LPD+ +K L E+ L+R Sbjct: 262 EDEDIAAIFKLTHELGGIESARNLAKKYTDKAYKLIGQLPDNEYKSMLKEMSRVLLER 319 >gi|289549205|ref|YP_003474193.1| Geranyltranstransferase [Thermocrinis albus DSM 14484] gi|289182822|gb|ADC90066.1| Geranyltranstransferase [Thermocrinis albus DSM 14484] Length = 300 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/229 (37%), Positives = 137/229 (59%), Gaps = 5/229 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +E++ I + + +V+ + ++ Y+ +GGKR+RP+L L TA ML + + LA I Sbjct: 4 LEQLERSITEFLMPEVKTVLEIGNYIASAGGKRVRPILMLETARMLGGDTERLIPLAVGI 63 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E+IH A+LLHDDVVD + +RRG+ +A V+GN VL GD++ ++A + + +++E Sbjct: 64 EYIHMASLLHDDVVDGADVRRGRPSANRVFGNPIVVLTGDYMYARALWLYSLYGNMKSIE 123 Query: 132 ALSLVACTLAEGE-LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +S +AEG+ L L + K +D EE YL ++ KT LF A++ V +L++G Sbjct: 124 IVSRAVMQMAEGQVLELLHIGKIID--EETYLRIVDGKTGALFGASMGVGALMSGYPGF- 180 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + G+ +G AFQ+VDD LDY G+ MGK G D R GK T P++ Sbjct: 181 -EEFYRMGVKVGRAFQMVDDALDYIGDQKVMGKPAGNDLREGKCTYPLL 228 >gi|311030284|ref|ZP_07708374.1| heptaprenyl diphosphate synthase component II [Bacillus sp. m3-13] Length = 320 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/325 (30%), Positives = 173/325 (53%), Gaps = 14/325 (4%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +KM+ D++ + + I ++ ++ + +L+ +GGKR+RP+ L A + Y Sbjct: 3 LKMMYSFLNNDLQIIENELEATIQTERALLQEASLHLLQAGGKRIRPVFVLLAAKLGAY- 61 Query: 61 GDNHVL--LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 D H + +A A+E +H A+L+HDDV+DD+ LRRGK + W N+ ++ GD++ +++ Sbjct: 62 -DIHKVKNVAVALELMHMASLVHDDVIDDAELRRGKSTIKAKWDNRIAMYTGDYIFARSL 120 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 M+ + + EA LS L +GE+ Q+ N D YL IK KTA+L + + + Sbjct: 121 EMMTKVEDIEAHRILSNTLVELCKGEIEQIRDKYNYDQNLRTYLRRIKRKTAILIAVSCQ 180 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + ++ +GV SV Q+L +G +G++FQ+ DD+LD+ ++GK G D G TLPV Sbjct: 181 LGAITSGVPASVHQSLYWFGYYVGMSFQITDDILDFTSTEEQLGKPAGSDLLQGNITLPV 240 Query: 239 ILAFQRGTKREK-NFWKSTINDGKIS--VENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 + A + EK N G+I +E +K++ I R + AL D Y ++A Sbjct: 241 LYAMESPPLNEKIRTIHEHSNSGEIKEIIELIKRSDAIDR-SFALSD------RYLERAF 293 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320 L LP+ K++ V + +R Sbjct: 294 KELEKLPNGLAKRTFNNVAKYIGKR 318 >gi|126179759|ref|YP_001047724.1| geranyltranstransferase [Methanoculleus marisnigri JR1] gi|125862553|gb|ABN57742.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Methanoculleus marisnigri JR1] Length = 321 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 107/336 (31%), Positives = 174/336 (51%), Gaps = 29/336 (8%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVK---YLIFSGGKRLRP-MLTLATALM 56 M LED + E+++ +L R DV D+ + +L+ +GGKRLRP ++ LA + Sbjct: 1 MTTLEDYLEMNAERID-KVLHRYFGDVH--GDLFRASAHLLLAGGKRLRPAVVILAADAV 57 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + D+ + A ++E H TL+HDD++D A RRG +W T++L GD L ++ Sbjct: 58 RKGSSDDLIPAALSLELTHNFTLIHDDIMDGDAARRGVPTVHTIWDEPTAILAGDVLYAK 117 Query: 117 AFCMVIETKSQEA--LEALSLVA--CT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171 AF + +++ +A + A+ ++A CT + EG+ ++ K DV+E +YL ++ KT V Sbjct: 118 AFEFICFSEAADAAKIRAVKMLARTCTDICEGQSMDMAFEKRHDVSEVEYLEMVSKKTGV 177 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L+ A+ + ++AG AL YG+N GIAFQ+ DD++D GK+ D R Sbjct: 178 LYGASAAIGGILAGASPVQADALYQYGVNSGIAFQIQDDLIDLLASSEASGKDRASDIRE 237 Query: 232 GKPTLPVILAFQRG---TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288 GK TL I A ++G + + I+D +I R A V + RA Sbjct: 238 GKQTLIAIRAREKGIDLAPYRRELSGAEIDD------------LIARLREAGVIDQVRAV 285 Query: 289 SYGQK--AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 + + AK +L LPDS ++ L E+ DF + R N Sbjct: 286 AVERAGIAKQALSILPDSEERRLLEEIADFFIARGN 321 >gi|72381895|ref|YP_291250.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. NATL2A] gi|72001745|gb|AAZ57547.1| trans-hexaprenyltranstransferase [Prochlorococcus marinus str. NATL2A] Length = 323 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/293 (34%), Positives = 160/293 (54%), Gaps = 10/293 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L + H LA E IHTA+L+HDDVVD++ Sbjct: 36 AAEHLFSAGGKRLRPGIVLLISRALTSEKELPLKHRKLAQITEMIHTASLVHDDVVDEAD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + + +VL GDFL +QA + ++ E ++ LS V LAEGE++Q Sbjct: 96 TRRGVETVHSRFDPRIAVLAGDFLFAQASWHLANLENLEVVKLLSRVIMDLAEGEIKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E YL KTA L + + + +++ V +L +G LG+AFQ+VD Sbjct: 156 NRFDSSQSFESYLEKSYCKTASLIANSSKAIGVLSNVDQESLNSLYFFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV-ENLK 268 D+LD+ G ++GK D ++G T PV A E+N S + +GK S ++L Sbjct: 216 DILDFTGNDEQLGKPAASDLQSGYLTAPVFYAL------EENPSLSELINGKFSQKDDLD 269 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +A ++R++ A+ + A + ++KDS+ LPDS KK+L+E+ +F + RL Sbjct: 270 QALSLVRDSSAIKKSRELAEQFASESKDSISWLPDSPSKKALLELPEFVISRL 322 >gi|157692773|ref|YP_001487235.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus SAFR-032] gi|157681531|gb|ABV62675.1| possible heptaprenyl diphosphate synthase component II [Bacillus pumilus SAFR-032] Length = 320 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/301 (30%), Positives = 160/301 (53%), Gaps = 10/301 (3%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SD ++ + +L+ +GGKR+RP+ L + + +Y + +A A+E IH A+L+HD Sbjct: 25 VRSDYALLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVALELIHMASLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ LRRGK + W N+ ++ GD++ +++ + + A E LS + L Sbjct: 85 DVIDDAELRRGKPTIKAKWDNRIAMYTGDYMFARSLEYMTKINHPMAHEILSKMVVELCL 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ N+D YL IK KTA+L + + ++ ++ AG +AL +G +G Sbjct: 145 GEIEQVKDKYNMDQNLRTYLRRIKRKTALLIAGSCQLGAIAAGTDEKTHKALYWFGYYVG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT-KREKNFWKSTINDGK 261 +++Q++DDVLD+ E+GK +G D G TLPV+ A + T + + S + + Sbjct: 205 MSYQIIDDVLDFTSTEEELGKPVGGDLLQGNVTLPVLYALKNPTLEGQLKLINSETTEMQ 264 Query: 262 IS--VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 + +E+LK+ I R R + Y +KA + L LP + SL + + + Sbjct: 265 LKPVIEHLKQTDAIDRSIRV-------SEMYLKKAFEQLDKLPRGRARTSLASIAKYIGK 317 Query: 320 R 320 R Sbjct: 318 R 318 >gi|114566500|ref|YP_753654.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337435|gb|ABI68283.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 313 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 159/292 (54%), Gaps = 13/292 (4%) Query: 33 VVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVVDDSA 89 ++ YL+ S GK LRP +L LA + Y D ++ + A+E IH A+L+HDDV+D + Sbjct: 11 IIDYLLESSGKMLRPRLLYLAAS---PYPHDPLMVRDMGVAVELIHLASLVHDDVIDQAL 67 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG+ + + N+TSVL GD L + AF ++ + + ++ ++ + +GE++QLS Sbjct: 68 TRRGQESINSRYNNKTSVLTGDLLFATAFNLINQHPFPQVMDQITRTIQLMCQGEIKQLS 127 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 L+ NLDV+EE+Y SKTA LF+ + V + I+ + L+ YG+ LG A+Q++D Sbjct: 128 LAFNLDVSEEEYYEKSYSKTACLFACSCRVGAWISSMPEKYASLLEEYGLYLGYAYQIID 187 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI--NDGKISVENL 267 D+LD + +GK G D + G TLP+I A + TK + + + G++ L Sbjct: 188 DILDLVADSQALGKPAGNDLKEGNITLPIIYALK--TKEYGSLLRKILAGETGQLDTREL 245 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 K I+ ++ A+ + + QKA SL P S K + + F ++ Sbjct: 246 KN---ILLDSGAIEYARSISRQFLQKALASLELFPVSPAIKEMKNIALFIME 294 >gi|239943496|ref|ZP_04695433.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] gi|239989950|ref|ZP_04710614.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 11379] gi|291446967|ref|ZP_06586357.1| isoprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] gi|291349914|gb|EFE76818.1| isoprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] Length = 336 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 4/312 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + V +L+ SDV I D ++L+ +GGKR RP+L + + + V A + Sbjct: 24 LAAVEAGLLEATKSDVPFITDAAQHLVRAGGKRFRPLLVMLASQFGDPDAPGVVPSAVVV 83 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A ++ EA+ Sbjct: 84 ELTHLATLYHDDVMDEADVRRGVPSANTRWGNSVAVLTGDFLFARA-SHILADLGPEAVR 142 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + L G++ + + ++ + YL V+ KT L + + ++++G Sbjct: 143 IQAEAFERLVTGQILETAGPRDGRDPVDHYLDVLSGKTGSLVAVSGRFGAMMSGADERTV 202 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV--ILAFQRGTKRE 249 L YG LGIAFQL DDVLD + +E GK G D R G PTLPV + A + Sbjct: 203 DILTQYGERLGIAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRLRAQAAADGKP 262 Query: 250 KNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + + DG +S ++ L + +R + AL Y Q+A+ +L LP+ K Sbjct: 263 DDVELVELLDGDLSGDDALAEVLRRLRAHPALEQARQDTVRYAQEARATLAPLPEGYAKA 322 Query: 309 SLMEVVDFCLQR 320 +L E+ D + R Sbjct: 323 ALEELCDAVVHR 334 >gi|254391153|ref|ZP_05006360.1| isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294814410|ref|ZP_06773053.1| Isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|326442800|ref|ZP_08217534.1| putative polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|197704847|gb|EDY50659.1| isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294327009|gb|EFG08652.1| Isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 336 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 151/312 (48%), Gaps = 4/312 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + V +L S+V I + ++L+ +GGKR RP+L + A + V A + Sbjct: 24 LSAVEAGLLDATKSEVPFITEAAQHLVRAGGKRFRPLLVMLAAQFGDPYSPGVVPAAVVM 83 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A ++ EA+ Sbjct: 84 ELTHLATLYHDDVMDEADVRRGVPSANARWGNSVAVLTGDFLFARA-SHILADLGPEAVR 142 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + L G++ + + + E YL VI KT L + + + +++AG + Sbjct: 143 IQAEAFERLVTGQILETAGPREGGDPIEHYLDVIGGKTGSLIAVSGRIGAMMAGADERIV 202 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L YG LG+AFQL DDVLD +E GK G D R G PTLPV+ +R + Sbjct: 203 DTLTQYGERLGVAFQLADDVLDIASHSHESGKTPGTDLREGIPTLPVLRLRERAKATGEA 262 Query: 252 FWKSTINDGKISVENLKKAFIIMRENR---ALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + + + + + ++R R AL Y Q+A+ +L LPD K Sbjct: 263 ADRELVELLDGDLADDDRLAEVLRRFRDHPALEQARRDTVRYAQEARATLAPLPDCPAKA 322 Query: 309 SLMEVVDFCLQR 320 +L E+ D + R Sbjct: 323 ALEELCDAVVHR 334 >gi|28393675|gb|AAO42250.1| putative geranyl diphosphate synthase (GPPS) (dimethylallyltransferase) [Arabidopsis thaliana] Length = 322 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/318 (30%), Positives = 173/318 (54%), Gaps = 11/318 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALM--LEYRGDNH 64 D++++N +L + ++ ++ + + +GGKR+RP L ATA + L+ H Sbjct: 10 DLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLKELTVEH 69 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 L IE IHTA+L+HDDV+D+S +RRG+ ++G + +VL GDF+ +QA + Sbjct: 70 RRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDFMFAQASWYLANL 129 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 ++ E ++ +S V A GE++Q S + DV +DY+ KTA L +A+ + +++ + Sbjct: 130 ENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFS 189 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V++ V + + +G NLG++FQ+VDD+LD+ ++GK D G T PVI A + Sbjct: 190 KVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFALEN 249 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + + G +L++A I+R + + A + A +L CLP S Sbjct: 250 EPRLREIIESEFCEPG-----SLEEAIEIVRNRGGIKKAQELAKEKAELALKNLNCLPRS 304 Query: 305 SWKKSLMEVVDFCLQRLN 322 ++ +L ++V F L+R++ Sbjct: 305 GFRSALEDMVMFNLERID 322 >gi|113474063|ref|YP_720124.1| trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101] gi|110165111|gb|ABG49651.1| Trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101] Length = 323 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 91/291 (31%), Positives = 158/291 (54%), Gaps = 8/291 (2%) Query: 35 KYLIFSGGKRLRPMLTL---ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L GKR+RP + L T ++ + H LA E IHTA+L+HDD+VD+S +R Sbjct: 38 EHLFRVKGKRIRPAIVLLISRTTMLTQEITPKHRRLAEITEMIHTASLVHDDIVDESEIR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG ++ N+ +VL GDFL +Q+ + + E ++ LS V LAEGE++Q Sbjct: 98 RGVPTVHSLFTNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSKVIMDLAEGEIQQGLHR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 N D++ E YL KT+ L + + + +++I+ V + Q + YG +G+AFQ+VDD+ Sbjct: 158 FNTDLSIEAYLEKSYYKTSSLIANSSKAAAIISDVPPEIVQDMYYYGRYIGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ +GK D ++G T P + A + EK + D +L++A Sbjct: 218 LDFTSATESLGKPACSDLKSGNLTAPTLYALEEKPALEKLLERELAQDS-----DLEEAI 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +++ +R + ++ A Y + A + L+ LPD +++L+ + D+ L RL+ Sbjct: 273 QLIKNSRGIKRSQELATKYAKMAVEHLQSLPDCDSRQALINLTDYVLSRLS 323 >gi|22329620|ref|NP_173148.2| SPS2 (Solanesyl diphosphate synthase 2); trans-octaprenyltranstransferase [Arabidopsis thaliana] gi|34327936|dbj|BAC82428.1| solanesyl diphosphate synthase [Arabidopsis thaliana] gi|57999785|dbj|BAD88534.1| solanesyl diphosphate synthase 2 [Arabidopsis thaliana] gi|114213509|gb|ABI54337.1| At1g17050 [Arabidopsis thaliana] gi|332191414|gb|AEE29535.1| solanesyl diphosphate synthase 2 [Arabidopsis thaliana] Length = 417 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 97/328 (29%), Positives = 178/328 (54%), Gaps = 11/328 (3%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALM 56 ++ L ++ D++++N +L + ++ ++ + + +GGKR+RP L ATA + Sbjct: 95 LETLFEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAEL 154 Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 L+ H L IE IHTA+L+HDDV+D+S +RRG+ ++G + +VL GDF+ Sbjct: 155 AGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDFMF 214 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 +QA + ++ E ++ +S V A GE++Q S + DV +DY+ KTA L + Sbjct: 215 AQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVA 274 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A+ + +++ + V++ V + + +G NLG++FQ+VDD+LD+ ++GK D G Sbjct: 275 ASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNI 334 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 T PVI A + + + G +L++A I+R + + A + A Sbjct: 335 TAPVIFALENEPRLREIIESEFCEPG-----SLEEAIEIVRNRGGIKKAQELAKEKAELA 389 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +L CLP S ++ +L ++V F L+R++ Sbjct: 390 LKNLNCLPRSGFRSALEDMVMFNLERID 417 >gi|5734760|gb|AAD50025.1|AC007651_20 Very similar to prenyl transferase [Arabidopsis thaliana] Length = 379 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 97/328 (29%), Positives = 178/328 (54%), Gaps = 11/328 (3%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALM 56 ++ L ++ D++++N +L + ++ ++ + + +GGKR+RP L ATA + Sbjct: 57 LETLFEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAEL 116 Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 L+ H L IE IHTA+L+HDDV+D+S +RRG+ ++G + +VL GDF+ Sbjct: 117 AGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDFMF 176 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 +QA + ++ E ++ +S V A GE++Q S + DV +DY+ KTA L + Sbjct: 177 AQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVA 236 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A+ + +++ + V++ V + + +G NLG++FQ+VDD+LD+ ++GK D G Sbjct: 237 ASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNI 296 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 T PVI A + + + G +L++A I+R + + A + A Sbjct: 297 TAPVIFALENEPRLREIIESEFCEPG-----SLEEAIEIVRNRGGIKKAQELAKEKAELA 351 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +L CLP S ++ +L ++V F L+R++ Sbjct: 352 LKNLNCLPRSGFRSALEDMVMFNLERID 379 >gi|320354672|ref|YP_004196011.1| poluprenyl synthetase [Desulfobulbus propionicus DSM 2032] gi|320123174|gb|ADW18720.1| Polyprenyl synthetase [Desulfobulbus propionicus DSM 2032] Length = 338 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 79/241 (32%), Positives = 129/241 (53%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ ++V Y +F+GGKR+RP+LT+ + LA A E++H ATL+HDDV+D + Sbjct: 41 LLGEIVHYALFNGGKRIRPLLTVLCSRCCGRDDAELYQLAAAFEYLHVATLVHDDVIDRA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG G ++L GD+L + + ++ + LE ++ GE QL Sbjct: 101 EQRRGTPTVVARHGLTAAILAGDWLHAHSMHLIGKLAGGRGLEIFCQATASMVNGEFAQL 160 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 L ++ TE+ Y VI+ KT L + + +L AG + R AL +YG +G AFQ+V Sbjct: 161 RLIGDITGTEQQYFEVIRQKTGNLIRSTCSIGALFAGADEARRTALATYGDRIGAAFQVV 220 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LD+ G + GK IG DF GK TLP++ A +R ++++ + + E + Sbjct: 221 DDLLDFLGSAHRTGKTIGNDFIEGKLTLPLLHALERADDQDRHTLNQLLTGDRTRTEAYR 280 Query: 269 K 269 + Sbjct: 281 Q 281 >gi|291570889|dbj|BAI93161.1| solanesyl diphosphate synthase [Arthrospira platensis NIES-39] Length = 323 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 161/290 (55%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L GKR+RP +L ++ A M ++ H LA E IHTA+L+HDDVVD+S LR Sbjct: 38 EHLFSVQGKRVRPAIVLLISRATMPDHEIIPKHRRLAEITEMIHTASLVHDDVVDESELR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG ++ N+ +VL GDFL +Q+ + + E ++ LS V LAEGE++Q Sbjct: 98 RGVPTVHSLFNNRVAVLAGDFLFAQSSWYLANLDNLEVVKLLSQVIMDLAEGEIQQGLNR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + ++ E YL KTA L + + + + L++GV + + L YG N+G+AFQ+VDD+ Sbjct: 158 FDTSLSIEAYLEKSYYKTASLIANSSKAAGLLSGVSAELAEDLYKYGRNIGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ G +GK D ++G T P + A EK F ++ I+ +L++A Sbjct: 218 LDFTGSTESLGKPAASDLKSGNLTAPTLFALA-----EKPFLETLIDREFAQDGDLEQAI 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +++E+ + + A + Q A + + LP S +++L+E+ D+ + R+ Sbjct: 273 ALIQESSGIDKSRELAIHHAQVAVEHINQLPPSESRQALVELGDYVVSRI 322 >gi|124023595|ref|YP_001017902.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9303] gi|123963881|gb|ABM78637.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9303] Length = 323 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 163/293 (55%), Gaps = 10/293 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L GD H LA E IHTA+L+HDDVVD++A Sbjct: 36 AAEHLFSAGGKRLRPGIVLLISRALSADGDLSARHRRLAEITEMIHTASLVHDDVVDEAA 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + ++ +VL GDFL +QA + + ++ LS V LA+GE++Q Sbjct: 96 TRRGVATVHSRFNHRVAVLAGDFLFAQASWHLANLDNLAVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + YL KTA L + +++ + +++G +++L +G LG+AFQ+VD Sbjct: 156 YRYDTGQSFATYLEKSYCKTASLMANSVQAAGVLSGESVEHQKSLHHFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE-NLK 268 D+LD+ G ++GK D +G T P + A E++ + + + + S E +L Sbjct: 216 DILDFTGSEQQLGKPAASDLASGYLTAPALYAL------EEHLALARLIEREFSEEDDLD 269 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +A ++R ++A+ + A + +++++++ LPDS +++LME+ DF L RL Sbjct: 270 QALELVRNSQAISRSRQLAEDFARESREAIAWLPDSPCQRALMELPDFVLSRL 322 >gi|255078126|ref|XP_002502643.1| predicted protein [Micromonas sp. RCC299] gi|226517908|gb|ACO63901.1| predicted protein [Micromonas sp. RCC299] Length = 452 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 102/317 (32%), Positives = 165/317 (52%), Gaps = 12/317 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALMLEYRG--DNH 64 DME++ IL + ++ + +GGKRLRP+L ATA ++ + Sbjct: 141 DMEQMRSNILDIVGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAQLMSMDDITERQ 200 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 LA E IHTA+L+HDDV+DD RRG ++G + ++L GDFL +Q+ + Sbjct: 201 RRLAEITEMIHTASLVHDDVLDDCDTRRGAETIHTLYGTRVAILAGDFLFAQSSWYLANL 260 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 + E ++ +S V A+GE+ Q N DVT E YL +KTA L +A+ + +++ + Sbjct: 261 DNLEVIKLISQVIADFADGEISQAGALFNCDVTLEGYLEKSHNKTASLIAASCKSAAVFS 320 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V V+ + YG +LG+AFQ+VDD+LD+ ++GK G+D +G T P I A R Sbjct: 321 EVSEDVKMDMYEYGKHLGLAFQIVDDILDFTQSEAQLGKPKGQDLASGNLTAPCIFALGR 380 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + + I + E+L +A I+ E+ + D A A +L+ LP+ Sbjct: 381 NPR-----LRELIETQFANPEDLAEAIEIVNES-GIEDARRLAREEADMALAALKGLPEG 434 Query: 305 SWKKSLMEVVDFCLQRL 321 K SL+++V + L+RL Sbjct: 435 KAKTSLVDMVGYVLERL 451 >gi|205373837|ref|ZP_03226639.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus coahuilensis m4-4] Length = 320 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 162/298 (54%), Gaps = 4/298 (1%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I S + + + +L+ +GGKR+RP+ L EY D +A ++E IH A+L+ D Sbjct: 25 ISSSSQTLNEASLHLLQAGGKRIRPVFVLLGGKFGEYNIDVVKNVAVSLELIHMASLVLD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ +RRG + W N+ ++ GD++ +++ ++ + EA + LS + + Sbjct: 85 DVIDDAEIRRGIPTVKSQWDNKVAMYTGDYIFARSLDYMLNIPNPEAHKILSDAIVEVCK 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ + + DYL IK KTA+L + + ++ ++++G V + L +G +G Sbjct: 145 GEIAQIKDKYLFEQSLRDYLRRIKRKTALLIAVSCQLGAIVSGAPREVHERLYRFGYYVG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 ++FQ++DD+LD+ +E+GK G D G TLPV+ A + T R+ + T+ I Sbjct: 205 MSFQIIDDILDFTATADELGKPAGGDLLQGNITLPVLFAMEDPTLRQ----QITLVHENI 260 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 S + L+ + ++ + A+ + + Y +KA LR LP + K +L ++ + +R Sbjct: 261 SSDELQTIIVNVKNSDAIERSHQVSQQYLKKAIQELRHLPKNKAKSTLRDIATYLGKR 318 >gi|88604119|ref|YP_504297.1| farnesyltranstransferase [Methanospirillum hungatei JF-1] gi|88189581|gb|ABD42578.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Methanospirillum hungatei JF-1] Length = 320 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 99/323 (30%), Positives = 165/323 (51%), Gaps = 13/323 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 LE K ++VN L+ + +L+F+GGKRLRP L A + Sbjct: 3 LETYLKKTADEVNSLLQDCYGDPKTALSRAANHLLFAGGKRLRPALFKLAADAVTPGASQ 62 Query: 64 HVLLA-CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 ++ A A+E H TL+HDD++D RRG+ +WG ++L GD L ++AF ++ Sbjct: 63 KIMQAGLALEVTHNFTLIHDDIMDKDVYRRGQKTVHTLWGEPAAILAGDVLYARAFFLIC 122 Query: 123 ETKSQEA--LEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 ++ E + A+SL+A T + EG+ + +S + DVT ++YL +I KT VL+ AA Sbjct: 123 NAEAPEGAKVRAISLLARTCEEICEGQQQDMSFEEREDVTRDEYLDMITKKTGVLYGAAA 182 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + SL+AG + AL +YG +G AFQ+ DD++D + GK+ D R GK TL Sbjct: 183 AIGSLLAGGSEAQVDALYTYGCKIGAAFQIQDDLIDLLASSEKSGKDQASDIREGKQTLI 242 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A ++G + W+ + +S +++ ++ E + E A A + Sbjct: 243 AITAREKGIDLKP--WRRS-----LSKDDIVSLIALLNEKGVIHSVEQEANDMISSAING 295 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L LPD++ KK L ++ + ++R Sbjct: 296 LSVLPDTTEKKLLADLAWYFIKR 318 >gi|281422323|ref|ZP_06253322.1| octaprenyl-diphosphate synthase [Prevotella copri DSM 18205] gi|281403644|gb|EFB34324.1| octaprenyl-diphosphate synthase [Prevotella copri DSM 18205] Length = 325 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 93/293 (31%), Positives = 152/293 (51%), Gaps = 2/293 (0%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V+ ++ GKR+RP+L L A + A +E +HTA+L+HDDVVD+S Sbjct: 32 LLSQVLDHIRQRAGKRMRPILILLMARNFGKVSNVTQHSAVGLELLHTASLVHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+ + + N+ +VLVGDF+LS A V + S+E + L+ + L+ GE+ QL Sbjct: 92 VERRGQASVNATYNNKVAVLVGDFILSTALLHVSYSHSEEIVRYLAELGRILSNGEILQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + N +++E+ Y VIK KTA LF A + ++ A + K +G NLGI FQ+ Sbjct: 152 NSISNEEISEDIYYQVIKQKTAALFEACAGIGAMSANASELQIEEAKRFGQNLGIIFQIR 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+ DY + E+GK G D GK TLPVI A + E + ++ + + Sbjct: 212 DDIFDYY-DSKEIGKPTGNDMVEGKLTLPVIYALKSTGDEEMMKLARKVKAHTVTADEIA 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLMEVVDFCLQR 320 + +EN + + R + + +A + L + D +L +DF ++R Sbjct: 271 QLVAFTKENGGIEYADKRMWDFHAEAMNFLDTYVEDKDIYNALKAYLDFVIER 323 >gi|186682243|ref|YP_001865439.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102] gi|186464695|gb|ACC80496.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102] Length = 323 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 159/290 (54%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP +L ++ A MLE H LA E IHTA+L+HDDVVD+S +R Sbjct: 38 EHLFGAGGKRIRPAIVLLISRATMLEQDITPRHRRLAEITEMIHTASLVHDDVVDESDVR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG ++GN+ ++L GDFL +Q+ + + E ++ LS V LA GE++Q Sbjct: 98 RGVPTVHSLFGNRIAILAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLATGEIQQGLNR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + ++ E YL KTA L + + + + L++ V + L SYG + GIAFQ+VDD+ Sbjct: 158 FDAGISIETYLQKSYYKTASLIANSSKAAGLLSEVSRETVEHLYSYGRHFGIAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ + +GK +G D ++G T PV+ A E + +G +L++A Sbjct: 218 LDFTSTTDTLGKPVGSDLKSGNLTAPVLFALAEKPSLEVLIDREFAQEG-----DLEQAL 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++++++ + A + + A + L LP S ++L+ + ++ L RL Sbjct: 273 ALIQDSQGIHKARELAAHHAKLAIEHLAVLPPSESHQALINIAEYTLSRL 322 >gi|240103885|ref|YP_002960194.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA) [Thermococcus gammatolerans EJ3] gi|239911439|gb|ACS34330.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA) [Thermococcus gammatolerans EJ3] Length = 343 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 98/335 (29%), Positives = 169/335 (50%), Gaps = 32/335 (9%) Query: 17 FLILKRICSDV-----EMIP--------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 F ++++ DV E++P D ++ +GGKR+RP + L + + Sbjct: 8 FTRIRKLAGDVDKIILELVPEKEPKTLYDAARHYPLAGGKRVRPFVVLRATEAVGGDPEK 67 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A A+EFIH +L+HDD++D LRRG+ VWG ++L GD L S+AF V + Sbjct: 68 ALYPAAAVEFIHNYSLVHDDIMDMDELRRGRPTVHKVWGINMAILAGDLLFSKAFEAVAK 127 Query: 124 TK-----SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 K LE L + L EG+ + +VT ++YL +I KT LF + Sbjct: 128 AKVDPDKKARILEVLVKTSNELCEGQALDIEFETRDEVTVDEYLKMISGKTGALFDGSAT 187 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + +++ QAL +G N+GIAFQ+ DDVLD + ++GK +G D R GK TL V Sbjct: 188 IGAIVGTDNEEYIQALSKWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSDIRKGKKTLIV 247 Query: 239 ILAFQRGTKREK-NFWK------------STINDGKISVENLKKAFIIMRENRALVDTEY 285 FQ ++ +K F K + I+D ++ E +++A ++++ ++ Sbjct: 248 SHFFQNASEDDKAEFLKVFGKYAGDAKGDALIHDERVK-EEVERAIELLKKYGSIDYAAQ 306 Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A ++A ++L+ LP+S ++ L + +F ++R Sbjct: 307 YAKDLVKEANEALKVLPESEARRDLELLAEFLVER 341 >gi|298529963|ref|ZP_07017365.1| Trans-hexaprenyltranstransferase [Desulfonatronospira thiodismutans ASO3-1] gi|298509337|gb|EFI33241.1| Trans-hexaprenyltranstransferase [Desulfonatronospira thiodismutans ASO3-1] Length = 322 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 105/322 (32%), Positives = 170/322 (52%), Gaps = 4/322 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L D +++ ++N + + + ++ +V ++++ SGGKRLRPMLT+ TA L Y+ Sbjct: 1 MSKLSDFFSRELPRINATLEQELAQLNPLVKEVGEHILLSGGKRLRPMLTILTARCLGYQ 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LAC++EF+H+ATL+HDD++D + RRG+ A L +G +VL GD LL+ A + Sbjct: 61 DQDIYPLACSLEFLHSATLIHDDILDSADTRRGQTACHLAFGLHRTVLAGDALLALANLI 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V ++ A GE+ +++ ++ YL +I+ KTA L AA Sbjct: 121 VARYDIPAMNYCVAQAIMRTATGEVEEIAQIRSPRPDRTAYLEIIQGKTADLIRAACSCG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A S+G N+G+AFQLVDD LDY + +GK +G D R GK TLP+IL Sbjct: 181 AMLARADQERLDHADSFGFNVGMAFQLVDDALDYAADHELLGKPLGGDLREGKITLPLIL 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR--AYSYGQKAKDSL 298 Q K ++ + + +++ II + +DT+ R A Y Q A +L Sbjct: 241 YLQTLQKDQQGEILHKMAHDLLCDHEMQQ--IIGQIQEMGLDTKVREEAGKYLQLAGQAL 298 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 PD+ K L E+V+ R Sbjct: 299 ESFPDAPEKYLLQEIVEVVRSR 320 >gi|261402402|ref|YP_003246626.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7] gi|261369395|gb|ACX72144.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7] Length = 317 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 82/228 (35%), Positives = 131/228 (57%), Gaps = 5/228 (2%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 LK+ + + + K+L+F+GGKRLRP LT+ T + + + + A A+E IH TL Sbjct: 15 LKKYVDKNDELYNASKHLLFAGGKRLRPYLTVITYNLKKDNMEEILPAAAAVELIHNYTL 74 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSL 135 +HDD++D+ RRGK +V+G ++L GD L ++AF V K+ + L+ LS Sbjct: 75 IHDDIMDNDDERRGKPTVHVVYGEPIAILAGDLLYAKAFEAVSNIKDSKKAHDVLKILSK 134 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + EG+ + N + T E+YL +I+ KT L A++E+ +++A + ALK Sbjct: 135 ACVEVCEGQAMDMKFE-NYNPTMEEYLEMIRKKTGALLEASVEIGAIMADCSEEEKTALK 193 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 Y +G+ FQ+ DDVLD G+ N++GK +G D R GK T+ VI A + Sbjct: 194 EYAKRIGLTFQIQDDVLDLIGDKNKIGKPVGSDIREGKKTIIVIHALK 241 >gi|302344811|ref|YP_003813164.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845] gi|302149655|gb|ADK95917.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845] Length = 326 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 91/289 (31%), Positives = 155/289 (53%), Gaps = 1/289 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+ ++ GKR+RP+L L A + A +E +HTA+L+HDDVVD++A RR Sbjct: 36 VLNHIKQRAGKRMRPILILLMAKNFGKVSEATQHAAVGLELLHTASLVHDDVVDEAAARR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+ + + N+ +VLVGD++LS A V T S+ + L+ + TL++GE+ QL + Sbjct: 96 GQASVNADYDNKVAVLVGDYVLSTALLHVSYTHSEIIVRYLAELGRTLSDGEILQLWNIQ 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N ++TEE Y +I+ KTA LF + + + A + +A + +G +LGI FQ+ DD+ Sbjct: 156 NKEITEEVYYKIIERKTAALFESCAAIGAESANASDEEVEAARLFGKHLGIVFQIRDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E+GK G D GK TLP+I A E + +++ E++ K Sbjct: 216 DYYDSEAEIGKPTGNDMAEGKLTLPIIYALNSTKNEEMLALAHKVKAHEVTREDIDKLVE 275 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320 + + + E R + + +A+ L + + D S + +L +D+ ++R Sbjct: 276 FAKVSGGIEYAERRMWDFHAEAQTFLDKYVKDESIRSALQTYLDYVIKR 324 >gi|20089495|ref|NP_615570.1| bifunctional short chain isoprenyl diphosphate synthase [Methanosarcina acetivorans C2A] gi|19914402|gb|AAM04050.1| bifunctional short chain isoprenyl diphosphate synthase [Methanosarcina acetivorans C2A] Length = 324 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 93/291 (31%), Positives = 154/291 (52%), Gaps = 11/291 (3%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +YL+ +GGKRLRP + + A + + + A A+E +H TL+HDD++D +RRG Sbjct: 38 RYLVDAGGKRLRPAVLILAAEAVGSDLKSVLPAAVAVELVHNFTLIHDDIMDKDNIRRGM 97 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVACTLAEGELRQLS 149 A + WG ++L GD L S+AF ++ + ++ + ++ LS + EG+ + Sbjct: 98 PAVHVKWGEAGAILAGDTLYSKAFEILSKVENDPVRILKCMDVLSKTCTEICEGQWLDMD 157 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 K VTE +YL +++ KT+VL++AA ++ +L+ G + V ++L YG +GI FQ+ D Sbjct: 158 FEKRDRVTELEYLEMVEKKTSVLYAAAAKIGALLGGASDEVAESLSEYGRLIGIGFQMYD 217 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 DVLD +GK G D GK TL VI AF +G + G+ +VE + Sbjct: 218 DVLDMVAPEEVLGKVRGSDLMEGKYTLIVIEAFGKGVTLD------IFGKGEATVEETEA 271 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A + E ++ + A SY + K L L D K L+++ D+ + R Sbjct: 272 AVRTLTECGSIDYVKNLAISYINQGKAKLDVLRDCPEKDLLLQIADYMIAR 322 >gi|317504363|ref|ZP_07962347.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606] gi|315664485|gb|EFV04168.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606] Length = 325 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 159/304 (52%), Gaps = 2/304 (0%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L + + D ++ V+ ++ GGKR+RP+L L A A +E +HTA Sbjct: 21 LFNQSLSHDNGLLAQVLMHIRQRGGKRMRPILILLMAKNFGCVSSVTQHAAVGLELLHTA 80 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +L+HDDVVD+S+ RRG+ + ++ N+ SVLVGDF+LS A V +T S+ + LS + Sbjct: 81 SLVHDDVVDESSERRGQASVNALYDNKVSVLVGDFILSTALLYVSKTHSEVIVRRLSELG 140 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 TL++GE+ QL+ + ++E Y +IK KTA LF + + + AG + +A + + Sbjct: 141 RTLSDGEILQLTNIQKEAISETAYYEIIKRKTAALFESCAAIGAESAGASDDDVEAARLF 200 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G NLGI FQ+ DD+ DY + E+GK G D GK TLPVI A + E + Sbjct: 201 GQNLGIIFQIRDDIFDYY-DSKEIGKPTGNDMLEGKLTLPVIYALKSTGNAEMMTLARKV 259 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDF 316 ++ + + +E+ + E + + + + + DS+ K +L +DF Sbjct: 260 KAREVKQSEINQLVAFTKESGGIEYAEQQMWKFHAACMQFIDEKVGDSTIKAALKAYLDF 319 Query: 317 CLQR 320 ++R Sbjct: 320 VIER 323 >gi|303326545|ref|ZP_07356988.1| decaprenyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3] gi|302864461|gb|EFL87392.1| decaprenyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3] Length = 323 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 167/313 (53%), Gaps = 7/313 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++ VN + + E + V ++ +GGKRLRP+L + TA +L Y + LA Sbjct: 13 ELPPVNAALERAAHGLPEPVRPVALHIFEAGGKRLRPLLVVLTARLLGYERADIYDLAVT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H ATLLHDDV+D++A RRGK AA ++ ++L GD LL+QA +V Sbjct: 73 MEMLHAATLLHDDVLDNAASRRGKPAAHTIFDVTPTILAGDALLAQANALVAGFGDPRLS 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 S A GE+ +++ + +D + E+Y +++ KTA L A+ ++ +L AG ++ Sbjct: 133 LCFSEATSRTAAGEILEIAAQRRVDTSAEEYAEIVRGKTAWLIRASCQLGALRAGGTDAQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-TKRE 249 +A +YG NLG+AFQ+VDD LD+ E + GK G D R GK T P+ L ++ G E Sbjct: 193 VEAAAAYGENLGMAFQMVDDALDFAPE-SLTGKPTGGDVREGKLTPPLRL-YRLGLADGE 250 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR--AYSYGQKAKDSLRCLPDSSWK 307 + + + G ++ + A I R A D + R A +Y A+ +L LPD + Sbjct: 251 RAAFDAAFGCGLMTDND--AAAIAGRIRDAGHDRQTRLDADAYLATARSALDALPDRPER 308 Query: 308 KSLMEVVDFCLQR 320 + + ++ D+ R Sbjct: 309 ELMRQMADYVRDR 321 >gi|161527820|ref|YP_001581646.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1] gi|160339121|gb|ABX12208.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1] Length = 326 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 91/317 (28%), Positives = 164/317 (51%), Gaps = 7/317 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 K+ + VN + ++ + + + D +LI GGKRLRP + + + +L + N + A Sbjct: 9 KNAKTVNKYLKSKLKGNPKKLYDAAGHLIVHGGKRLRPYMVIRSCQILGGKSSNAMPAAS 68 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---- 125 A+E +H TL+HDD++D+ +R G +G ++L GD L S+A+ ++ +TK Sbjct: 69 AVEMVHNFTLVHDDIMDNDEMRHGVPTTHRKYGMPIAILAGDVLFSKAYQVISDTKLSPT 128 Query: 126 -SQEALEALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLI 183 + + L+ + EG+L + +++ + T+ Y+ +I KTA LF + + ++ Sbjct: 129 ATTHLISRLAKACVDVCEGQLLDVKMAEEKKIPTQSQYITMIGKKTAALFDVSCAMGAIC 188 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + L S+G NLGIAFQ+ DD++ G+ K +G D R GK +LP+++A + Sbjct: 189 ATNKGKDISNLSSFGRNLGIAFQITDDLIGVMGDPKITKKPVGNDLREGKKSLPILMAIK 248 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 ++K + KIS +L KA ++R +A Y +KA+ SL Sbjct: 249 LAKGKDKKIILKAFGNSKISRNDLNKAVDVIRSLGIEDSVRRQALKYAEKAEKSLSKY-S 307 Query: 304 SSWKKSLMEVVDFCLQR 320 S K L+ ++DF ++R Sbjct: 308 GSAKTELIALLDFVVKR 324 >gi|330834019|ref|YP_004408747.1| geranyltranstransferase [Metallosphaera cuprina Ar-4] gi|329566158|gb|AEB94263.1| geranyltranstransferase [Metallosphaera cuprina Ar-4] Length = 327 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 24/311 (7%) Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 +VN I K I DV + + +YL+ +GGKRLRP++ + ++ +L D +L AIE Sbjct: 13 QVNETIDKYIQGDVPELYEASRYLLKAGGKRLRPLMVVLSSELLGGSRDRAILAGAAIEV 72 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-------S 126 +H TL+HDD++D RRG + WG T++L GD L ++AF ++ E+ + Sbjct: 73 LHNFTLIHDDIMDQDTTRRGLPTVHVKWGIPTAILAGDLLHAKAFELITESIKGLPIDLA 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL S ++EG+ + + DVTE YL +I+ KTA LF+ + + L+A Sbjct: 133 YRALNCFSRSIVIVSEGQAMDMEFERRWDVTENLYLEMIRKKTAQLFACSAHLGGLLANG 192 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N +L +G +GIAFQ++DD+L + E+GK + D R GK T+ +I A +R Sbjct: 193 TNEEVNSLYDFGEKIGIAFQIMDDILGITADEKELGKPLYSDIREGKKTILLIKALERAN 252 Query: 247 KREKNFWKSTIND-GKISVENLKKAFIIMRE-----NRALVDTEY--------RAYSYGQ 292 + ++ K+ +N G V L ++ E ++ LV Y + S Q Sbjct: 253 EHQR---KTIMNGMGSSEVSTLSSVASLLSELSLDYSQQLVRKYYENALRSLSKVRSRNQ 309 Query: 293 KAKDSLRCLPD 303 A D LR + D Sbjct: 310 LALDGLRAIAD 320 >gi|288869706|ref|ZP_05975848.2| short chain isoprenyl diphosphate synthase [Methanobrevibacter smithii DSM 2374] gi|288861214|gb|EFC93512.1| short chain isoprenyl diphosphate synthase [Methanobrevibacter smithii DSM 2374] Length = 335 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 103/293 (35%), Positives = 151/293 (51%), Gaps = 8/293 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL +GGK LRP LTL T+ + DN + A AIE IHT +L+HDD++DD +RRGK Sbjct: 41 YLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIHDDIMDDDDMRRGKP 100 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLA-------EGELRQ 147 A VW ++L GD L S+AF +++ + ++ A LS T+A EG+ Sbjct: 101 AVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNTPAQLSQTLATVADACVKICEGQASD 160 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 +S DV+EE+YL +I KT L +AA + +++ G V A+ YG +G+AFQ+ Sbjct: 161 MSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQI 220 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DD LD + +GK IG D GK T+ I A + + D S E++ Sbjct: 221 QDDYLDLASDEETLGKPIGSDIAKGKMTIIAIKALAASEGEDNKKLLEILKDDNNSQEDI 280 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A + + A+ + A AK L LPDS K+ L ++ DF L+R Sbjct: 281 DVALDLFNKYGAIEYAKNVALENVASAKKVLEILPDSESKQMLFDLADFVLER 333 >gi|331699298|ref|YP_004335537.1| trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans CB1190] gi|326953987|gb|AEA27684.1| Trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans CB1190] Length = 331 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 92/324 (28%), Positives = 163/324 (50%), Gaps = 13/324 (4%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 +L +T +++V L+ + + +D + + +LI +GGKR RP+ TL +A + Sbjct: 14 PVLAAVTTDGLKRVEDLLHREVQADYHFVAETSLHLIDAGGKRFRPLFTLLSAQVGPNPD 73 Query: 62 DNHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 ++ V+ A A+ E +H ATL HDDV+D + +RRG +A W N ++L GDFL + A + Sbjct: 74 NDDVITAAAVVELVHLATLYHDDVMDSATMRRGAESANSRWDNTVAILTGDFLFAHASRL 133 Query: 121 VIETKSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 V + +A+ ++A T AE G++R+ D E YL V+ KT L + + Sbjct: 134 VADLGP----DAVRIIAETFAELVTGQMRETRGPAEGDDPVEHYLRVVAEKTGSLIATSG 189 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +G ++L+ +G +G AFQ+ DDV+D ++ GK G D R G TLP Sbjct: 190 RYGGMFSGCTPEQTESLRRFGATIGTAFQISDDVIDIASPSDDSGKTPGTDLREGVQTLP 249 Query: 238 VILAFQRG-TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 ++ A Q R + I+D +++A ++R L + Y + +++ Sbjct: 250 MLYALQEPRADRLRQLLARPISDDA----EVEEALDLLRTGPGLDRSRETLARYAEASRE 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 L LPD + +L + + ++R Sbjct: 306 QLAILPDCAATSALATLTAYVVER 329 >gi|315646428|ref|ZP_07899546.1| Trans-hexaprenyltranstransferase [Paenibacillus vortex V453] gi|315278071|gb|EFU41391.1| Trans-hexaprenyltranstransferase [Paenibacillus vortex V453] Length = 324 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 163/317 (51%), Gaps = 12/317 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KDM+ + + + D + + +L+ +GGKRLRP+ L +Y D +A Sbjct: 12 KDMDVIEKELYLSVEGDSPELTETSLHLLRAGGKRLRPVFVLMGGKFGDYDIDKLKHVAV 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IH+A+L+HDDV+DD+ RRGK + W N+ ++ GD++ +A + K E Sbjct: 72 PLELIHSASLVHDDVIDDADTRRGKPTVKAKWDNRIAMYTGDYIYGKALELTTHLKQPEI 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEED---YLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ ++ GE+ Q+ ++ TE+D YL I+ KT++L + + ++ +L A Sbjct: 132 HQILAKAMVEMSIGEMEQI---RDFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGALAADA 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 V +L +G N+G+AFQ+ DD+LD G ++GK G D R G TLPVI A + Sbjct: 189 DRQVANSLYRFGYNVGMAFQIQDDLLDLCGTEKQIGKPPGSDMRQGNITLPVIFALKDSE 248 Query: 247 KRE---KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 +RE + +G+ V + A ++ + + E A Y KA +L LPD Sbjct: 249 RREALLAELDRIHALNGQCDVSD---AVKLVTSSEGIARAEALADRYIGKALAALDTLPD 305 Query: 304 SSWKKSLMEVVDFCLQR 320 KK L ++ +F +R Sbjct: 306 IRSKKQLRDIANFITKR 322 >gi|288801789|ref|ZP_06407231.1| octaprenyl-diphosphate synthase [Prevotella melaninogenica D18] gi|288335831|gb|EFC74264.1| octaprenyl-diphosphate synthase [Prevotella melaninogenica D18] Length = 326 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 91/289 (31%), Positives = 154/289 (53%), Gaps = 1/289 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+ ++ GKR+RP+L L A + A +E +HTA+L+HDDVVD++A RR Sbjct: 36 VLNHIKQQAGKRMRPILILLMAKNFGKVSEATQHAAVGLELLHTASLVHDDVVDEAAARR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+ + + N+ +VLVGD++LS A V T S+ + L+ + TL++GE+ QL + Sbjct: 96 GQASVNADYDNKVAVLVGDYVLSTALLHVSYTHSEIIVRYLAELGRTLSDGEILQLWNIQ 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N ++TEE Y +I+ KTA LF + + + A + +A + +G +LGI FQ+ DD+ Sbjct: 156 NKEITEEVYYKIIERKTAALFESCAAIGAESANASDEEVEAARLFGKHLGIVFQIRDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E+GK G D GK TLP+I A E + +++ E++ K Sbjct: 216 DYYDSEAEIGKPTGNDMAEGKLTLPIIYALNSTKNEEMLALAHKVKAHEVTREDIDKLVE 275 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320 + + E R + + +A+ L + + D S + +L +D+ ++R Sbjct: 276 FAKVTGGIEYAERRMWDFHAEAQTFLDKYVKDDSIRSALQTYLDYVIKR 324 >gi|74100792|gb|AAZ99640.1| isoprenyl diphosphate synthase [Streptomyces mycarofaciens] Length = 336 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 156/309 (50%), Gaps = 12/309 (3%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ S+V I + ++L+ +GGKR RP+L + +A + V A +E H AT Sbjct: 31 LLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++++RRG +A WGN +VL GDFL ++A ++ EA+ +L Sbjct: 91 LYHDDVMDEASVRRGVPSANTRWGNSVAVLTGDFLFARA-SQILADLGPEAVRVQALAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + + ++++G +V L YG Sbjct: 150 RLVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK-------N 251 LG+AFQL DDVLD + +E GK G D R G PTLPV+ +R + Sbjct: 210 ERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRLRERAARLGLAEDVALCE 269 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 S ++D E L+ ++R + AL Y + A+ +L L + K +L+ Sbjct: 270 LLDSDLSDDARHAEALR----LLRAHPALEQARKDTVRYAKDARAALAPLRECEAKSALV 325 Query: 312 EVVDFCLQR 320 E+ D + R Sbjct: 326 ELCDAVVHR 334 >gi|4633648|gb|AAD26851.1| geranylgeranyl diphosphate synthase [Archaeoglobus fulgidus] Length = 317 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 161/293 (54%), Gaps = 18/293 (6%) Query: 35 KYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 ++LI +GGKRLRP+++L AL +YR + A +IE IH TL+HDD++D +RR Sbjct: 34 RHLIKAGGKRLRPVISLLAVEALGKDYR--KIIPAAVSIETIHNFTLVHDDIMDRDEMRR 91 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAEGELRQ 147 G V+G T++L GD L ++AF C V ++A E LS V + EG+ Sbjct: 92 GVPTVHRVYGEATAILAGDTLFAEAFKLLTKCDVESEGIRKATEMLSDVCIKICEGQYYD 151 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 +S K V+EE+YL +++ KT VL +A+ + +++ G + +AL YG+ GI FQ+ Sbjct: 152 MSFEKKESVSEEEYLRMVELKTGVLIAASAALPAVLFGESEEIVKALWDYGVLSGIGFQI 211 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DD+LD E GK+ G D GK TL VI AF++G K K F K K V + Sbjct: 212 QDDLLDL---TEETGKDWGSDLLKGKKTLIVIKAFEKGVKL-KTFGKE-----KADVSEI 262 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +RE A+ A ++AK L LP+S K++L+E+ DF + R Sbjct: 263 RDDIEKLRECGAIDYAASMARKMAEEAKRKLEVLPESKAKETLLELTDFLVTR 315 >gi|325958579|ref|YP_004290045.1| dimethylallyltranstransferase [Methanobacterium sp. AL-21] gi|325330011|gb|ADZ09073.1| Dimethylallyltranstransferase [Methanobacterium sp. AL-21] Length = 328 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 93/305 (30%), Positives = 164/305 (53%), Gaps = 10/305 (3%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D E + ++LI +GGK++RP + + +A+ + + + A A+E IHT +L+HDD++ Sbjct: 26 DPEELKKSTQHLIKAGGKKIRPSMVVLSAIAVGGAPEEALKTAAAVELIHTFSLIHDDIM 85 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLV--AC 138 D+ +RRG+ + ++WG ++L GD L S+AF V+ET + + AL V +C Sbjct: 86 DEDDMRRGEPSVHVLWGEPMAILAGDTLFSKAFETVLETPIDNVSYERVVGALKTVVDSC 145 Query: 139 T-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + EG+ + N +V+EE Y+++I KT L +A+ + ++I G + L Y Sbjct: 146 IKICEGQASDMCFEGNFEVSEEAYMNMIYKKTGALIAASTKSGAIIGGGTPEQVELLSEY 205 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G +G+AFQ+ DD LD + ++GK +G D GK TL V+ A + + +K S + Sbjct: 206 GRLVGLAFQIQDDYLDVMSDEQDLGKPVGSDVVEGKMTLMVVNALSKASPEDKKELISIL 265 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 + N+ +A + + ++ + A AK L LPDS K+SL + DF Sbjct: 266 EAEDDT--NVTRALELFNKYDSIDYAKNIALDNINTAKSLLDELPDSEAKESLSMIADFV 323 Query: 318 LQRLN 322 ++R++ Sbjct: 324 VERIH 328 >gi|222151368|ref|YP_002560524.1| component B of hexaprenyl diphosphate synthase [Macrococcus caseolyticus JCSC5402] gi|222120493|dbj|BAH17828.1| component B of hexaprenyl diphosphate synthase [Macrococcus caseolyticus JCSC5402] Length = 325 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 88/300 (29%), Positives = 159/300 (53%), Gaps = 1/300 (0%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I S+ +I + +++ SGGKR+RPM L + + + ++ + A ++E IH A+L+HD Sbjct: 25 IQSESTVITNASMHILNSGGKRVRPMFVLLSGFLAKGEKEHLIRTAVSLELIHMASLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 D +D+S RRG + + + T++ G FLL++A + E + + S + Sbjct: 85 DYIDNSDKRRGNTSVHMAFNKDTAIRTGHFLLARALENIAEINDSQYHQIFSKTILEVCF 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE Q++ N +T +YL I KTA+L A+ + ++ + + +K +G +G Sbjct: 145 GEFDQMADRFNYPITFTEYLRRINRKTAILIEASCHLGAVSTNLDSYTTYHVKQFGHCIG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +++Q++DD+LDY + +GK +G D RNG T P+I A + E + ++ + Sbjct: 205 MSYQIIDDILDYTSDEVTLGKPVGSDIRNGHVTYPLIAAIDVLNQHEDYRLEQSVMQLQQ 264 Query: 263 SVENLKKAFIIMRENRALV-DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 S + +II + R V +E + YG KAK L LPDS+ K L+++ + L+R+ Sbjct: 265 SSDEAVFDYIIEQVKRYGVHSSEVLSRKYGDKAKFHLDQLPDSNIKSYLIQIHEKMLKRI 324 >gi|55981624|ref|YP_144921.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB8] gi|55773037|dbj|BAD71478.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB8] Length = 312 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 164/292 (56%), Gaps = 6/292 (2%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SDV I + + L+ +GGKR+RP L + L + LA A+E +H+ATLLHD Sbjct: 19 VQSDVLFIRLIHQDLVTAGGKRIRPRLVFLASRALGG-APFELELALAVELLHSATLLHD 77 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 D++DD+ RRGK AA +GN SVL GDFLLS+ ++ +T E +E + VA TL+E Sbjct: 78 DLIDDAETRRGKEAAFRKYGNAVSVLSGDFLLSRLLHVIAKTGRMELVERFAEVAKTLSE 137 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q ++ D + E+Y +I +KTAVL + A E +L+ G ++ VR+AL YG+ G Sbjct: 138 GEVLQFQVAALEDYSLENYERIITAKTAVLMALATEGPALLLGAESGVREALYRYGLLYG 197 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 AFQ+ DD LD G +GK +G D R GK TL +L +R + + + G Sbjct: 198 QAFQMRDDYLDLMGTPEVLGKPVGGDLREGKATLIPLLLMERYPEVREVLRRRAREAG-- 255 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 +L++ + RE+ A + R + A +L LP S ++++L E+ Sbjct: 256 ---DLERVRALARESGAAEEAVRRIRERAEAAAQALEALPPSPFREALRELA 304 >gi|297159526|gb|ADI09238.1| putative polyprenyl diphosphate synthase [Streptomyces bingchenggensis BCW-1] Length = 336 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 102/326 (31%), Positives = 161/326 (49%), Gaps = 12/326 (3%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + LE T + V +L+ SDV I ++L+ +GGKR RP+L L A + Sbjct: 14 RTLEADTQAGLTAVEEGLLEATKSDVPFITGAAQHLMRAGGKRFRPLLVLLAAQFGDPYA 73 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A + Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEADVRRGVASANARWGNSVAVLTGDFLFARA-SHI 132 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + EA+ + L G++ + + ++ E YL V++ KT L + + + Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPRDGQDPIEHYLDVLQGKTGSLVAVSGRFGA 192 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI-- 239 +++G SV L YG LGIAFQL DDVLD + +E GK G D R G TLPV+ Sbjct: 193 MMSGADESVVSILTQYGERLGIAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLHL 252 Query: 240 --LAFQRGTKREKNFWK---STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 A G+ ++ + ++D + E L++ +R + AL Y ++A Sbjct: 253 RAQAEASGSAEDRELCELLTGDLSDDGLHSEVLRR----LRAHPALEQARQDTLRYAEEA 308 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320 + L LP+ + K +L + D + R Sbjct: 309 RAMLAPLPEGAAKAALEGLCDAVVHR 334 >gi|46199593|ref|YP_005260.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB27] gi|46197219|gb|AAS81633.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB27] Length = 312 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 164/292 (56%), Gaps = 6/292 (2%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SDV I + + L+ +GGKR+RP L + L + LA A+E +H+ATLLHD Sbjct: 19 VQSDVLFIRLIHQDLVTAGGKRIRPRLVFLASRALGG-APFELELALAVELLHSATLLHD 77 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 D++DD+ RRGK AA +GN SVL GDFLLS+ ++ +T E +E + VA TL+E Sbjct: 78 DLIDDAETRRGKEAAFRKYGNAVSVLSGDFLLSRLLHVIAKTGRMELVERFAEVAKTLSE 137 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q ++ D + E+Y +I +KTAVL + A E +L+ G ++ VR+AL YG+ G Sbjct: 138 GEVLQFQVAALEDYSLENYERIITAKTAVLMALATEGPALLLGAESRVREALYRYGLLYG 197 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 AFQ+ DD LD G +GK +G D R GK TL +L +R + + + G Sbjct: 198 QAFQMRDDYLDLMGTPEVLGKPVGGDLREGKATLIPLLLMERYPEVREVLRRRAREAG-- 255 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 +L++ + RE+ A + R + A +L LP S ++++L E+ Sbjct: 256 ---DLERVRALARESGAAEEAVRRIRERAEAAAQALEALPPSPFREALRELA 304 >gi|311112076|ref|YP_003983298.1| trans-hexaprenyltranstransferase [Rothia dentocariosa ATCC 17931] gi|310943570|gb|ADP39864.1| trans-hexaprenyltranstransferase [Rothia dentocariosa ATCC 17931] Length = 370 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 160/310 (51%), Gaps = 16/310 (5%) Query: 20 LKRICSDVEMIPDVV-KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 L S + + DV ++L+ +GGKR+RP+LTL A + D+ + A +E H AT Sbjct: 66 LAEAISYTDKLADVAARHLLLAGGKRVRPLLTLLAAAVDGQINDDVIEAAVVVELTHLAT 125 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+DD+ RRG A+ +WGN ++L GD + S+A +V + ++ + + A Sbjct: 126 LYHDDVMDDAPKRRGVDTAQTIWGNSVAILTGDLIFSRASLLVSDLGTRP----MKIQAQ 181 Query: 139 TLAEGELRQL----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 T L QL + +N D+ + Y+ VI+ KT L +AA E SL+AG V Q L Sbjct: 182 TFERLVLGQLYETTGVRENQDILDH-YIAVIEGKTGSLIAAAGEYGSLLAGASEEVIQML 240 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL---AFQRGTKREKN 251 +YG +G+AFQL DDV+D + GK G D R G PTLP IL A + G + + Sbjct: 241 ATYGELVGVAFQLADDVIDIVSDGASSGKTQGTDLREGVPTLPTILLNRAAEAGDESARQ 300 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSL 310 T+ + +S ++ A + + ++ AY + +A ++ LPDS+ K +L Sbjct: 301 V--RTLIEADLSSDDALAAAVSALAAHPVTQEAWQIAYDWADRAIAAIAPLPDSTAKAAL 358 Query: 311 MEVVDFCLQR 320 + R Sbjct: 359 ESFAHAVVHR 368 >gi|11499867|ref|NP_071111.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Archaeoglobus fulgidus DSM 4304] gi|2648237|gb|AAB88971.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) {Methanobacterium thermoautotrophicum [Archaeoglobus fulgidus DSM 4304] Length = 326 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 161/293 (54%), Gaps = 18/293 (6%) Query: 35 KYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 ++LI +GGKRLRP+++L AL +YR + A +IE IH TL+HDD++D +RR Sbjct: 43 RHLIKAGGKRLRPVISLLAVEALGKDYR--KIIPAAVSIETIHNFTLVHDDIMDRDEMRR 100 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAEGELRQ 147 G V+G T++L GD L ++AF C V ++A E LS V + EG+ Sbjct: 101 GVPTVHRVYGEATAILAGDTLFAEAFKLLTKCDVESEGIRKATEMLSDVCIKICEGQYYD 160 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 +S K V+EE+YL +++ KT VL +A+ + +++ G + +AL YG+ GI FQ+ Sbjct: 161 MSFEKKESVSEEEYLRMVELKTGVLIAASAALPAVLFGESEEIVKALWDYGVLSGIGFQI 220 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DD+LD E GK+ G D GK TL VI AF++G K K F K K V + Sbjct: 221 QDDLLDL---TEETGKDWGSDLLKGKKTLIVIKAFEKGVKL-KTFGKE-----KADVSEI 271 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +RE A+ A ++AK L LP+S K++L+E+ DF + R Sbjct: 272 RDDIEKLRECGAIDYAASMARKMAEEAKRKLEVLPESKAKETLLELTDFLVTR 324 >gi|302553460|ref|ZP_07305802.1| heptaprenyl diphosphate synthase component II [Streptomyces viridochromogenes DSM 40736] gi|302471078|gb|EFL34171.1| heptaprenyl diphosphate synthase component II [Streptomyces viridochromogenes DSM 40736] Length = 336 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 93/303 (30%), Positives = 150/303 (49%), Gaps = 12/303 (3%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+V I + ++L+ +GGKR RP+L + +A + V A +E H ATL HDDV Sbjct: 37 SEVPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV 96 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D++ +RRG +A WGN +VL GDFL ++A + EA+ + L G+ Sbjct: 97 MDEATVRRGVASANTRWGNSVAVLTGDFLFARA-SHTLADLGPEAVRVQAEAFERLVTGQ 155 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + + + ++ E YL V+ KT L + + ++++G + L YG LG+A Sbjct: 156 ILETAGPQDGRDPVEHYLDVLAGKTGSLVAVSCRFGAMMSGADETTVDVLTQYGERLGVA 215 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK-------NFWKSTI 257 FQL DDVLD + +E GK G D R G PT+PV+ ++ + S + Sbjct: 216 FQLADDVLDIASDSHESGKTPGTDLREGIPTMPVLRLREQAARLGLADDVALCELLDSDL 275 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 D E L+ ++R + AL Y Q A+ +L LP+ + K +L+E+ D Sbjct: 276 TDDARHAEALR----LLRAHPALEQARRDTVRYAQDARSALAPLPECAAKAALVELSDAV 331 Query: 318 LQR 320 + R Sbjct: 332 VHR 334 >gi|56751750|ref|YP_172451.1| solanesyl diphosphate synthase [Synechococcus elongatus PCC 6301] gi|56686709|dbj|BAD79931.1| solanesyl diphosphate synthase [Synechococcus elongatus PCC 6301] Length = 323 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 157/294 (53%), Gaps = 16/294 (5%) Query: 36 YLIFSGGKRLRP--MLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +L +GGKRLRP +L L+ A M + H LA E IHTA+L+HDDVVD+S+LRR Sbjct: 39 HLFGAGGKRLRPAVVLLLSRATMPGQEITPRHRRLAEITEMIHTASLVHDDVVDESSLRR 98 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G + N+ +VL GDFL +QA + S ++ LS V LAEGE+ Q Sbjct: 99 GIPTVHSSFSNRVAVLAGDFLFAQASWHLAHLDSLTVVKLLSQVIMDLAEGEILQGLNRF 158 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + ++ E YL KTA L + + +S+++G +V AL YG +LG+AFQ+VDD+L Sbjct: 159 DSSLSIEVYLDKSYYKTASLLANSARAASVLSGSSETVCDALYDYGRSLGLAFQIVDDIL 218 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR----EKNFWKSTINDGKISVENLK 268 D+ G +GK G D +G T P + A + E+ F ++ ++ + Sbjct: 219 DFTGSEEVLGKPAGSDLASGNLTAPALYAIEEHPALVPLIEREFSQA---------QDFE 269 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +A ++ ++ L T A + QKA +L LP S K++L+ + + L RL+ Sbjct: 270 QAIALVHNSQGLARTRALAAEHAQKAVQALDVLPASDCKETLISLTSYVLSRLS 323 >gi|320160874|ref|YP_004174098.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1] gi|319994727|dbj|BAJ63498.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1] Length = 328 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 84/215 (39%), Positives = 123/215 (57%), Gaps = 4/215 (1%) Query: 28 EMIPDV---VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 E PD+ + L+ +GGKR+RP LTL ML +G+ + LA AIE +HTATL+HDD+ Sbjct: 33 ERYPDLQSALDLLLSAGGKRIRPTLTLLAGKMLRAKGEPLLHLAAAIEMLHTATLVHDDL 92 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D S LRRG W +VL GD+L ++A + +T S ++ S + GE Sbjct: 93 IDGSLLRRGMPTLNSRWSPGATVLTGDYLFARAANLAAQTDSIPVMKLFSETLSIIVGGE 152 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ S +Y I +KTA LF + + ++L+ +AL++YG ++G+A Sbjct: 153 LTQM-FSTRCKADRTNYYQRIYAKTASLFETSAKSAALLCLTSELHTEALRAYGYSVGMA 211 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 FQ++DD+LDY GE +GK IG D R G TLP I Sbjct: 212 FQIIDDILDYTGEQATLGKPIGSDLRQGLVTLPAI 246 >gi|111220513|ref|YP_711307.1| heptaprenyl diphosphate synthase component II [Frankia alni ACN14a] gi|111148045|emb|CAJ59711.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase subunit 2) [Frankia alni ACN14a] Length = 296 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 90/291 (30%), Positives = 148/291 (50%), Gaps = 7/291 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 ++L+ +GGKR RP++ L A + V A AIE H +TL HDDV+D++ RRG Sbjct: 6 RHLVDAGGKRFRPIVVLLAAQFADPHAPGVVPAAVAIELTHLSTLYHDDVMDEAPRRRGA 65 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-LSLSKN 153 +A W N ++L GD+L ++A + + A L+ TL EG++R+ + + + Sbjct: 66 ASANARWTNTVAILTGDYLFARASDITADL-GPAATRILARTIATLCEGQIRETVGPAPD 124 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 D E YL V+ KTA L + + + +++AG L ++G G+AFQL DD++D Sbjct: 125 QDPVEH-YLRVVTEKTASLIATSGRLGAMLAGADPVTVDTLATFGELFGVAFQLSDDIID 183 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQ---RGTKREKNFWKSTINDGKISV-ENLKK 269 + + GK G D R G PTLPV+ A Q R R + S G + E + + Sbjct: 184 VASDPADSGKTPGTDLREGIPTLPVLYALQADDRPAARLRELINSDFAAGGGNPEEGVAE 243 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A ++R + + ++ +A++ L L D+ K +L + DF + R Sbjct: 244 AIELLRAHEGMARARQELVTWSTRARECLAPLSDNGAKAALESLADFVIDR 294 >gi|94986958|ref|YP_594891.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis PHE/MN1-00] gi|94731207|emb|CAJ54569.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis PHE/MN1-00] Length = 324 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 157/314 (50%), Gaps = 4/314 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +++ +N I K I I V ++++ S GKRLRPMLT+ + + Y D+ LA Sbjct: 10 QELPYINAAIKKSIAELPSSIQPVAEHILLSKGKRLRPMLTILLSRLFGYNEDDIYPLAI 69 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 ++EF+H ATLLHDDV+D++ LRR + A ++G +++L GD LL++ +V Q+ Sbjct: 70 SVEFLHAATLLHDDVLDNALLRRNTITAHNLFGTVSTILAGDALLAKGNLLVATYGCQKC 129 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + +S A GE+ ++ + + YL +I KTA + AA +V +L AG Sbjct: 130 ILTISQALYQTAHGEILEIYNQGEIWENKNIYLEIITGKTAWVIQAACKVGALKAGATPQ 189 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +G NLGIAFQ++DD LD+ + GK G D R GK T P+ + + E Sbjct: 190 QVDVAALFGYNLGIAFQIIDDALDFLPS-KDTGKPEGGDIREGKFTPPLFYYLKTLSLEE 248 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL---PDSSW 306 KN + + E + ++ E T A Y QKA +L L P + Sbjct: 249 KNIFIKKFQTHNFTDEEILTITRVIHEQNFDQKTRELANVYFQKALTNLELLTNVPKPEY 308 Query: 307 KKSLMEVVDFCLQR 320 K L+E +++ R Sbjct: 309 KTILIECLNYISTR 322 >gi|282879099|ref|ZP_06287859.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310] gi|281298833|gb|EFA91242.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310] Length = 325 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 94/282 (33%), Positives = 147/282 (52%), Gaps = 6/282 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GKR+RPML L A + G + A +E +HTA+L+HDDVVD+S RRG+ + Sbjct: 45 GKRMRPMLILLIAK--NFNGVTSIAQHAAVGLELLHTASLVHDDVVDESGERRGQASVNA 102 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 + N+ +VLVGD++LS A V T S+ ++ L+ + TL+ GE+ QLS +N D++EE Sbjct: 103 TYDNKVAVLVGDYILSTALLQVSFTHSEAIIQNLANLGRTLSNGEILQLSNIQNQDISEE 162 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 Y VIK KTA LF + + + +A + +G LGI FQ+ DD+ DY E Sbjct: 163 VYYQVIKQKTAALFESCAVIGAQAGKATPEEVEAAREFGQTLGIIFQIRDDIFDYF-ESK 221 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279 E+GK G D GK TLPVI A + D ++ + + + ++ Sbjct: 222 EIGKPTGNDMAEGKLTLPVIYALNSTHDAAMLRLAHKVKDNTVTPDEIAQLVAFTKQQGG 281 Query: 280 LVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320 + E R Q+A + + + D+ K +L +D+ ++R Sbjct: 282 IEYAEQRMGELHQQALAFIDKHVIDADIKNALQAYIDYVVKR 323 >gi|148655833|ref|YP_001276038.1| polyprenyl synthetase [Roseiflexus sp. RS-1] gi|148567943|gb|ABQ90088.1| Polyprenyl synthetase [Roseiflexus sp. RS-1] Length = 349 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 153/323 (47%), Gaps = 25/323 (7%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L DM +V +L R S ++ Y + +GGKRLR L L +A + Y + A Sbjct: 39 LSDMAEVERQMLARTASRSPLLTAAGTYTVAAGGKRLRAALVLLSARLGAYDPGRALHPA 98 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 AIE +H A+L+HDD+VD + RRG V W ++L+GD+L + A + Sbjct: 99 IAIELLHAASLIHDDLVDHAGQRRGHVTVHTRWDADVALLLGDYLFALAANELAAEPDPR 158 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + A T+ EGEL ++ + L E Y I KTAVLF AA + +AG Sbjct: 159 IIAFYTSAAQTMVEGELNPVTHVEPLATAVEQYYRKIGRKTAVLFEAACKAGIAVAGGDE 218 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 AL +G +LG+AFQ+VDDVLDY G+ +GK G D R G TLP++ A + Sbjct: 219 EQIDALGRFGYDLGLAFQIVDDVLDYTGDETALGKPAGNDLREGTLTLPLMYAV----AQ 274 Query: 249 EKNFWKSTINDGKIS----VENLKKAFI-------IMRENRALVDTEYRAYSYGQKAKDS 297 +N + +G+ V + A I M E R LV+ Y+ Sbjct: 275 SRNPLLRALANGQRPEPSRVPQIVAAVIASGGADRAMEEARMLVERSYQ----------H 324 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L + +++L E+ +F L R Sbjct: 325 LASFAATPARRALAEIGEFVLNR 347 >gi|260887775|ref|ZP_05899038.1| heptaprenyl diphosphate synthase component II [Selenomonas sputigena ATCC 35185] gi|330838673|ref|YP_004413253.1| Trans-hexaprenyltranstransferase [Selenomonas sputigena ATCC 35185] gi|260862451|gb|EEX76951.1| heptaprenyl diphosphate synthase component II [Selenomonas sputigena ATCC 35185] gi|329746437|gb|AEB99793.1| Trans-hexaprenyltranstransferase [Selenomonas sputigena ATCC 35185] Length = 324 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 96/317 (30%), Positives = 170/317 (53%), Gaps = 6/317 (1%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML-TLATALMLEYRGDNHV 65 L KD+ + +L+ + S V+ I ++ +L+ SGGKRLRP L LA ++ + Sbjct: 9 LIKKDLALLEEELLQAVVSPVDRITEIGTHLVKSGGKRLRPALFLLAARSSKDFDAKKMM 68 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA A+E IH A+L+HDDV+D + RRG V A +WGNQ ++L GD+ ++AF +++E Sbjct: 69 PLAVALELIHMASLVHDDVLDHADTRRGAVTANAMWGNQQAILSGDYFFARAFLLIVENG 128 Query: 126 SQEALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 E + ++ + L+ GE+ Q E+Y I KTA + E+ ++ Sbjct: 129 FGERVSGRVAQLIMDLSSGEIIQNKELYRASRDVEEYYERIAKKTANFLAICCELGAIAT 188 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + + L++YG +G+AFQ+ DD+LD ++GK G D G TLPVI A + Sbjct: 189 NLGAEAERGLRAYGKYVGMAFQITDDLLDLTSNEKKIGKPAGNDIHEGIVTLPVIRALEV 248 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-CLPD 303 ++RE+ S + + ++ E++++A +I+R + + + + +AK++L LPD Sbjct: 249 SSEREELL--SIVTNPSMTREDVERALVIVRASDGIEYARAKVREFLTEAKEALPAALPD 306 Query: 304 SSWKKSLMEVVDFCLQR 320 + + + D+ +R Sbjct: 307 -KVRDTFCKAADYIAKR 322 >gi|160883389|ref|ZP_02064392.1| hypothetical protein BACOVA_01358 [Bacteroides ovatus ATCC 8483] gi|237720619|ref|ZP_04551100.1| octaprenyl-diphosphate synthase [Bacteroides sp. 2_2_4] gi|260172659|ref|ZP_05759071.1| octaprenyl-diphosphate synthase [Bacteroides sp. D2] gi|293368662|ref|ZP_06615269.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f] gi|315920952|ref|ZP_07917192.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156111109|gb|EDO12854.1| hypothetical protein BACOVA_01358 [Bacteroides ovatus ATCC 8483] gi|229450370|gb|EEO56161.1| octaprenyl-diphosphate synthase [Bacteroides sp. 2_2_4] gi|292636304|gb|EFF54789.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f] gi|313694827|gb|EFS31662.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 324 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 94/291 (32%), Positives = 152/291 (52%), Gaps = 7/291 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 VV ++ GK +RP+L L A + + + A ++E +HTA+L+HDDVVD+S+ RR Sbjct: 36 VVSHIRQRNGKMMRPILVLLVARLYGAICPSTLHAAVSLELLHTASLVHDDVVDESSERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VL GD+LL+ + T S ++ +S + LA+GEL QLS Sbjct: 96 GQLSVNAIFNNKVAVLTGDYLLATSLVHAELTNSHRIIQLVSTLGQDLADGELLQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N +EE Y VI+ KTA LF+A + ++ GV + + G +GI FQ+ DD+ Sbjct: 156 NHSFSEEVYFDVIRKKTAALFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY + E+GK G D GK TLP + E + +G +++ + Sbjct: 216 DYF-DNKEIGKPTGNDMLEGKLTLPALYVLNTTKNEEAQEIAIKVKEGTATLDEIAHLIS 274 Query: 273 IMRENRALVDTEYRAYS---YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++EN + EY + Y QKA + L LPDS +L +D+ + R Sbjct: 275 FIKENGGI---EYAVQTMNVYKQKAFNLLASLPDSDICAALRAYLDYVVDR 322 >gi|282880585|ref|ZP_06289292.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1] gi|281305688|gb|EFA97741.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1] Length = 325 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 94/282 (33%), Positives = 146/282 (51%), Gaps = 6/282 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GKR+RPML L A + G + A +E +HTA+L+HDDVVD+S RRG+ + Sbjct: 45 GKRMRPMLILLIAK--NFGGVTSIAQHAAVGLELLHTASLVHDDVVDESGERRGQASVNA 102 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 + N+ +VLVGD++LS A V T S+ ++ L+ + TL+ GE+ QLS +N D++EE Sbjct: 103 TYDNKVAVLVGDYILSTALLQVSFTHSEAIIQNLANLGRTLSNGEILQLSNIQNQDISEE 162 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 Y VIK KTA LF + + + +A + +G LGI FQ+ DD+ DY E Sbjct: 163 VYYQVIKQKTAALFESCAVIGAQAGKATPEEVEAARQFGQTLGIIFQIRDDIFDYF-ESK 221 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279 E+GK G D GK TLPVI A + D ++ + + + ++ Sbjct: 222 EIGKPTGNDMAEGKLTLPVIYALNSTRNATMLQLAHKVKDNTVTSDEIVQLVAFTKQQGG 281 Query: 280 LVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320 + E R Q+ D + + + D K +L +D+ ++R Sbjct: 282 IEYAEQRMGELHQQTLDYIDKHVTDVDIKTALQAYIDYVVKR 323 >gi|212223283|ref|YP_002306519.1| bifunctional short-chain isoprenyl diphosphate synthase [Thermococcus onnurineus NA1] gi|212008240|gb|ACJ15622.1| bifunctional short-chain isoprenyl diphosphate synthase [Thermococcus onnurineus NA1] Length = 342 Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 94/305 (30%), Positives = 153/305 (50%), Gaps = 16/305 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D ++ +GGKR+RP + L A + + A A+E IH +L+HDD++D LR Sbjct: 36 DAARHYPLAGGKRVRPFVVLRAAEAVGGDPSKALYPAAAVELIHNYSLVHDDIMDMDELR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELR 146 RG+ VWG ++L GD L S+AF V K LE L + L EG+ Sbjct: 96 RGRPTVHKVWGINMAILAGDLLFSKAFEAVARAEISPEKKARILEVLVQTSNELCEGQAL 155 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + +VT ++YL +I KT LF + + +++ QAL +G N+GIAFQ Sbjct: 156 DIEFETREEVTVDEYLQMISGKTGALFDGSATIGAIVGTDNEEYIQALSKWGRNVGIAFQ 215 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK-------NFWKSTIND 259 + DDVLD + ++GK +G D R GK TL V FQ ++ +K + D Sbjct: 216 IWDDVLDLIADEEKLGKPVGSDIRKGKKTLIVSHFFQNASEEDKAQFMRVFGKYAGDAKD 275 Query: 260 GKISVENLK----KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + E++K KA ++R+ ++ A + ++A D+L+ LP+S ++ L + + Sbjct: 276 DALIHEDVKGEVAKAIELLRKYGSIDYAAEYAKNLVREANDALKILPESEARRDLELLAE 335 Query: 316 FCLQR 320 F ++R Sbjct: 336 FLVER 340 >gi|33862665|ref|NP_894225.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9313] gi|33634581|emb|CAE20567.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9313] Length = 323 Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 162/293 (55%), Gaps = 10/293 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L GD H LA E IHTA+L+HDDVVD++A Sbjct: 36 AAEHLFSAGGKRLRPGIVLLISRALSADGDLSARHRRLAEITEMIHTASLVHDDVVDEAA 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + ++ +VL GDFL +QA + + ++ LS V LA+GE++Q Sbjct: 96 TRRGVATVHSRFNHRVAVLAGDFLFAQASWHLANLDNLAVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + YL KTA L + +++ + +++G ++ L +G LG+AFQ+VD Sbjct: 156 YRYDTGQSFATYLEKSYCKTASLMANSVQAAGVLSGESVEHQKLLHHFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE-NLK 268 D+LD+ G ++GK D +G T P + A E++ + + + + S E +L Sbjct: 216 DILDFTGSEQQLGKPAASDLASGYLTAPALYAL------EEHLALARLIEREFSEEDDLD 269 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +A ++R ++A+ + A + +++++++ LPDS +++LME+ DF L RL Sbjct: 270 QALELVRNSQAISRSRQLAEDFARESREAIAWLPDSPCQRALMELPDFVLSRL 322 >gi|258511659|ref|YP_003185093.1| Trans-hexaprenyltranstransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478385|gb|ACV58704.1| Trans-hexaprenyltranstransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 321 Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 95/310 (30%), Positives = 164/310 (52%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++++V L+ +R +D + + L+ +GGKR+RP+ L L ++ +A A Sbjct: 13 ELDRVERLLDERAHADHVDLAKAGRTLLEAGGKRIRPLFALICGLGEREWSEDVAKIAAA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ATL+HDDV+D + LRRGK R +GN ++ GD+L ++A ++ E + E Sbjct: 73 LEMIHMATLVHDDVIDRADLRRGKPTVRKSYGNLAAMYTGDYLFARAIQLLAEVDNLEVH 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L EGE+ Q+ N YL I KTA+L S + ++ +++ G Sbjct: 133 RLMARGIVLLCEGEIEQIEDFYNWSQGVMTYLRRIHRKTALLISLSCQLGAMVGGAPERE 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL +G +G+AFQ+VDD+LD+ G +GK +G D R G TLP +LA R E+ Sbjct: 193 VAALARFGHAVGMAFQIVDDLLDFTGAAEIVGKPVGGDLRQGNLTLPALLAASRPGFGER 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 ++ + +G E + +++ AL D E A Y +K++ L+ + + ++ L Sbjct: 253 --LRALVREGMREEEAEEAIRLVVASG-ALADAERLAERYLEKSRHLLQAVNRETVREQL 309 Query: 311 MEVVDFCLQR 320 M + F ++R Sbjct: 310 MGLTSFIIRR 319 >gi|21222966|ref|NP_628745.1| polyprenyl diphosphate synthase [Streptomyces coelicolor A3(2)] gi|289769814|ref|ZP_06529192.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24] gi|10129728|emb|CAC08284.1| putative polyprenyl diphosphate synthase [Streptomyces coelicolor A3(2)] gi|289700013|gb|EFD67442.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24] Length = 336 Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 156/309 (50%), Gaps = 12/309 (3%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ S+V I + ++L+ +GGKR RP+L + +A + V A +E H AT Sbjct: 31 LLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++A+RRG +A W N +VL GDFL ++A ++ EA+ +L Sbjct: 91 LYHDDVMDEAAVRRGVPSANTRWDNSVAVLTGDFLFARA-SQILADLGPEAVRVQALAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + + ++++G +V L YG Sbjct: 150 RLVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK-------N 251 LG+AFQL DDVLD + +E GK G D R G PTLPV+ +R + Sbjct: 210 ERLGVAFQLADDVLDIASDSDESGKTPGTDLREGIPTLPVLRLRERAARLGLAEDLALCE 269 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 S ++D E L+ ++R + AL Y ++A+ +L L + K +L+ Sbjct: 270 LLDSDLSDDARHAEALR----LLRAHPALEQARRDTVRYAEEARAALAPLRECDAKAALV 325 Query: 312 EVVDFCLQR 320 E+ D + R Sbjct: 326 ELCDAVVHR 334 >gi|299145219|ref|ZP_07038287.1| polyprenyl synthetase [Bacteroides sp. 3_1_23] gi|298515710|gb|EFI39591.1| polyprenyl synthetase [Bacteroides sp. 3_1_23] Length = 324 Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 94/291 (32%), Positives = 152/291 (52%), Gaps = 7/291 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 VV ++ GK +RP+L L A + + + A ++E +HTA+L+HDDVVD+S+ RR Sbjct: 36 VVSHIRQRNGKMMRPILVLLVARLYGAICPSTLHAAVSLELLHTASLVHDDVVDESSERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VL GD+LL+ + T S ++ +S + LA+GEL QLS Sbjct: 96 GQLSVNAIFNNKVAVLTGDYLLATSLVHAELTTSHRIIQLVSTLGQDLADGELLQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N +EE Y VI+ KTA LF+A + ++ GV + + G +GI FQ+ DD+ Sbjct: 156 NHSFSEEVYFDVIRKKTAALFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY + E+GK G D GK TLP + E + +G +++ + Sbjct: 216 DYF-DNKEIGKPTGNDMLEGKLTLPALYVLNTTKNEEAQEIAIKVKEGTATLDEIAHLIS 274 Query: 273 IMRENRALVDTEYRAYS---YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++EN + EY + Y QKA + L LPDS +L +D+ + R Sbjct: 275 FIKENGGI---EYAVQTMNVYKQKAFNLLASLPDSDICAALRAYLDYVVDR 322 >gi|254520331|ref|ZP_05132387.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. 7_2_43FAA] gi|226914080|gb|EEH99281.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. 7_2_43FAA] Length = 321 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 89/284 (31%), Positives = 151/284 (53%), Gaps = 4/284 (1%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 LI SGGK LRP L + + + A IE +H ATL+HDDV+DDS LRRG+ Sbjct: 40 LIESGGKLLRPAFVLIGSKFGTNDTEKSIPTAAVIEMLHMATLVHDDVIDDSKLRRGRET 99 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 + +G +V +GD+L F ++ + S +A++ S + GE+ QL+ ++ + Sbjct: 100 IQSKYGKDYAVYIGDYLFCVCFKILATSASLQAIKVDSRAMSKICMGEVNQLNSRFSMKL 159 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + +DYL+ I KTA LFS +L + + + V + L G NLG+AFQ++DD+LDY G Sbjct: 160 SVKDYLNRISGKTAELFSISLYLGAAECNADDKVSKELGKIGHNLGMAFQIIDDILDYEG 219 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 N + K+ D + G T+P+I A+ K K+ + + + + ++ +++E Sbjct: 220 NDNSIKKSAANDLKQGIYTIPLIYAY----KNNKSAFDDVLGKDFYTEDEVRNIVNLVKE 275 Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 N + + A Y +K + LP++ +K L E+ ++ L R Sbjct: 276 NNGIKMAKELAEKYMKKCFKGIDMLPNNEYKNILREIAEWLLLR 319 >gi|261878883|ref|ZP_06005310.1| octaprenyl-diphosphate synthase [Prevotella bergensis DSM 17361] gi|270334523|gb|EFA45309.1| octaprenyl-diphosphate synthase [Prevotella bergensis DSM 17361] Length = 325 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 159/294 (54%), Gaps = 4/294 (1%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V+ ++ GKR+RP+L L A + A +E +HTA+L+HDDVVD+S Sbjct: 32 LLSQVLDHVRQRAGKRMRPILILLMAKNYGQITSTTLNAAVGLELLHTASLMHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+ + + N+ +VL GD++LS A V T ++ +E L+ + TL+ GE+ QL Sbjct: 92 EERRGQASVNAEYNNKVAVLAGDYVLSTALLHVNFTHNEAIIETLAELGRTLSNGEILQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S +N ++E Y VI KTA LF A EV +L AG + +++G N+GI FQ+ Sbjct: 152 SAIQNQSISETTYYDVISQKTAALFEACAEVGALSAGADAAATTQARNFGRNIGIIFQIR 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-GTKREKNFWKSTINDGKISVENL 267 DD+ DY + +E+GK G D GK TLPVI A + G + N + + G +S + + Sbjct: 212 DDIFDYY-DTDEIGKPTGNDMAEGKLTLPVIYALKSTGDEAMMNLARK-VKQGTVSHDEI 269 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQR 320 + + + + + R + + +A D L+ + D K +L +D+ ++R Sbjct: 270 AQLVQFTKTHGGIEYADKRMWEFHAEAMDYLKNHVKDVEIKTALQAYIDYVVKR 323 >gi|313903572|ref|ZP_07836962.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965] gi|313466125|gb|EFR61649.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965] Length = 331 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 122/234 (52%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ V I + + I ++ YL GGKRLRP L L A +Y + + +A A Sbjct: 23 DLAAVEVAIRRALDGPDPHIVELATYLQRGGGKRLRPALVLLAARNFQYDRERLLPVAAA 82 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ATL+HDD+VD + RRG + WG T+VL GDFL ++AF ++ + Sbjct: 83 VELIHMATLVHDDIVDGATARRGLPTVNVRWGTGTAVLTGDFLFARAFSLLAADGDNRVV 142 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + ++ ++ GE+ Q + + EE Y I KTA S + L+ G Sbjct: 143 QVMAEAVYEMSTGEIEQQAQLFDPSTGEEGYYRRIYKKTAHFISHCCLMGGLMGGATEQQ 202 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +AL+ YG +G+ FQ++DD+LD G ++GK G D R+G TLPV+ A R Sbjct: 203 AEALRRYGYGIGMGFQVIDDILDLTGSPEQLGKPRGTDLRSGVLTLPVLFALAR 256 >gi|297844640|ref|XP_002890201.1| hypothetical protein ARALYDRAFT_889097 [Arabidopsis lyrata subsp. lyrata] gi|297336043|gb|EFH66460.1| hypothetical protein ARALYDRAFT_889097 [Arabidopsis lyrata subsp. lyrata] Length = 865 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 161/292 (55%), Gaps = 12/292 (4%) Query: 38 IFS-GGKRLRPMLTL----ATALM--LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 IFS GGKR+RP L ATA + L+ H L IE IHTA+L+HDDV+D+S + Sbjct: 579 IFSAGGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDM 638 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRGK ++G + +VL GDF+ +QA + ++ + ++ +S V A GE++Q S Sbjct: 639 RRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLQVIKLISQVIKDFASGEIKQASS 698 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + DV +DYL KTA L +A+ + +++ + V++ V + + +G NLG++FQ+VDD Sbjct: 699 LFDCDVELDDYLLKSYYKTASLVAASTKGAAIFSKVESEVAEQMYQFGKNLGLSFQVVDD 758 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 +LD+ ++GK D G T PVI A + + + G +L++A Sbjct: 759 ILDFTQSTEQLGKPAANDLAKGNITAPVIFALENEPRLREIIESEFCEPG-----SLEEA 813 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 I+R + + A G+ A +L CLP S ++ +L ++V F L+R++ Sbjct: 814 IEIVRNRGGIKKAQELAKEKGELALKNLNCLPRSGFRSALEDMVMFNLERID 865 >gi|315229911|ref|YP_004070347.1| dimethylallyltransferase [Thermococcus barophilus MP] gi|315182939|gb|ADT83124.1| dimethylallyltransferase [Thermococcus barophilus MP] Length = 342 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 103/309 (33%), Positives = 159/309 (51%), Gaps = 24/309 (7%) Query: 32 DVVKYLIFSGGKRLRP--MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + ++ +GGKR+RP +LT A A+ ++R + A AIE +HT TL+HDD++D Sbjct: 36 EATRHYPLAGGKRVRPFVVLTAAEAVGGDWR--KALYPAAAIEILHTYTLIHDDIMDMDE 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAEGE 144 RRG+ VWG ++L GD + S F V K E + A++ + EG+ Sbjct: 94 TRRGRATVHKVWGINMAILAGDLMYSVVFDAATKAPVSAEKIVEIVRAIARAGIEICEGQ 153 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L VT E+YL +I KTA LF A+ ++ +I QAL YG N+G+A Sbjct: 154 ALDLEFETRDTVTIEEYLKMIDGKTAALFDASAKIGGIIGTDNQEYIQALSKYGRNVGMA 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DDVLD + ++GK +G D R GK TL V FQ ++ +K + GK + Sbjct: 214 FQIWDDVLDLIADEKKLGKPVGSDIRKGKKTLIVAHFFQHASEEDKAEFLKVF--GKYAG 271 Query: 265 ENLKKAFI--IMRENRALVD---TEYRAYSYG--------QKAKDSLRCLPDSSWKKSLM 311 + K I +RE A V +Y + Y ++AK++L+ LP+S +K+L Sbjct: 272 DVKGKGIIEEDIREEVAKVIELLKKYGSIDYASRFAKNLVKEAKEALKVLPESEARKNLE 331 Query: 312 EVVDFCLQR 320 + DF ++R Sbjct: 332 LLADFIVER 340 >gi|304383744|ref|ZP_07366203.1| octaprenyl-diphosphate synthase [Prevotella marshii DSM 16973] gi|304335268|gb|EFM01539.1| octaprenyl-diphosphate synthase [Prevotella marshii DSM 16973] Length = 327 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 98/281 (34%), Positives = 149/281 (53%), Gaps = 2/281 (0%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGKR+RP+L L A D A +E +HTA+L+HDDVVD+S+ RRG+ + Sbjct: 46 GGKRMRPILILLLAKNYGTITDAAHHAAVGLELLHTASLVHDDVVDESSERRGQSSVNAT 105 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 + N+ +VLVGD++LS A V T+S + +L+ + TL++GE+ QL+ +N +++EE Sbjct: 106 YNNKVAVLVGDYILSTALLHVAYTQSDYIINSLAQLGRTLSKGEILQLTNIQNEEISEEV 165 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 Y VI+ KTA LF V++ AG N +A + +G +LG FQ+ DD+ DY + E Sbjct: 166 YYQVIEQKTAALFETCAAVAAKAAGASNESIEAARKFGRDLGTIFQIRDDIFDYY-DSRE 224 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280 +GK G D GK TLPVI A E + G IS E + + N + Sbjct: 225 IGKPTGNDMAEGKLTLPVIHALHVTADPEMLKLGKKVKKGNISPEEIATLVAFTKANGGI 284 Query: 281 VDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320 E R Y A + + D + +L+ +DF ++R Sbjct: 285 EYAEQRMNEYRISALQFIDNEVKDPDIRAALIAYIDFVIKR 325 >gi|295696360|ref|YP_003589598.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912] gi|295411962|gb|ADG06454.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912] Length = 327 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/315 (31%), Positives = 160/315 (50%), Gaps = 7/315 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--A 68 ++ +V L+ + + S + + YL+ +GGKRLRP++ L + R D L+ A Sbjct: 13 ELRRVEDLLEEEVASREPALQEASLYLLRAGGKRLRPLVVLVSGRFGPRR-DTEALVRAA 71 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRG+ + WG+Q ++ GDFL ++A ++ E + + Sbjct: 72 AALEMIHMATLVHDDVIDRSDTRRGRPTVKAAWGDQLALYTGDFLFARALELLSEMEDRR 131 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 E + + +GEL Q+ +D Y I+ KTA+L + + V + A Sbjct: 132 LHEVTAWAIARMCQGELEQMHDLYRIDQPLFRYYRRIRQKTALLMAVSCLVGARAAEADE 191 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ---RG 245 +AL +G +LG+AFQ+VDDVLD G+ MGK +G D G TLPV+ A + G Sbjct: 192 ETARALWRFGGHLGMAFQIVDDVLDLVGDEAVMGKPVGSDLLQGNLTLPVLFALRGRTSG 251 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + I+ G +S E+ + + E+ + + A Y A+ L LPD Sbjct: 252 DEAASRRLAGRIHPG-MSQEDAAEVVRAVAESGGIDEARRVAERYVTWARRDLAALPDGW 310 Query: 306 WKKSLMEVVDFCLQR 320 +++L V+ F R Sbjct: 311 AREALEAVLGFVTAR 325 >gi|220928949|ref|YP_002505858.1| polyprenyl synthetase [Clostridium cellulolyticum H10] gi|219999277|gb|ACL75878.1| Polyprenyl synthetase [Clostridium cellulolyticum H10] Length = 318 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 7/308 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+EKV + + S +++ + + +GGKRLRP + + ++ + R +N + LA A Sbjct: 11 DIEKVEENLRNSVTSKNKLLVKAIADTVGAGGKRLRPAMVIVSSYFGKIRQENLIQLASA 70 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +HTATL+HDDV+D+S RR +G ++ GDFL ++A M+ + L Sbjct: 71 IELLHTATLIHDDVLDNSPYRRNNETVYKKYGTDMAIYCGDFLYTKALLMLADIVPANKL 130 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + T+ EGE+ Q ++++ YL I KTAVLFSA+ + +L A + Sbjct: 131 TIAARAVKTICEGEVDQYRDKYVMNLSVPSYLKRISRKTAVLFSASCALGALCAKCNPRI 190 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT---K 247 +L G G+ FQL+DD DY+ +E GK + D G TLP I A + K Sbjct: 191 TNSLSKLGFYYGVMFQLIDDFRDYKSGDSEWGKPVYNDLSKGILTLPAIYACRDSKEIHK 250 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 R +N+W +N + E L ++ + + TE Y QKA + LP S + Sbjct: 251 RVQNYWNKKVN----TNEELNSIISLICSSGGMEYTENYIKRYRQKALREIDKLPQSEAR 306 Query: 308 KSLMEVVD 315 L ++++ Sbjct: 307 DILGDLIN 314 >gi|212704854|ref|ZP_03312982.1| hypothetical protein DESPIG_02921 [Desulfovibrio piger ATCC 29098] gi|212671696|gb|EEB32179.1| hypothetical protein DESPIG_02921 [Desulfovibrio piger ATCC 29098] Length = 321 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 89/288 (30%), Positives = 150/288 (52%), Gaps = 1/288 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 + +++ +GGKRLRP+LT+ A +L Y + LA +E +H ATLLHDDV+D++ RR Sbjct: 33 IARHIFEAGGKRLRPLLTILMARLLGYDKKDIYDLAVTMEMLHAATLLHDDVLDNADTRR 92 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 GK AA ++ +++L GD +L+ A +V + S A GE+ +++ Sbjct: 93 GKPAAHTIFNATSTILAGDAMLAHANALVAQCGDPRLCLCFSEATSRTAAGEILEIAAQH 152 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 ++ T E+Y +I+ KTA L A+ ++ +L AG ++ +A +YG N+G+AFQ+VDD L Sbjct: 153 QVETTAEEYEEIIRGKTAWLIRASCQLGALRAGADEALVEAAAAYGENIGMAFQIVDDAL 212 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 D+ + + GK G D R GK T P+ + + + ND + + ++ Sbjct: 213 DFAPQ-SVTGKPSGGDVREGKLTPPLRMYRDSLDDAARAAFDQAFNDASFTDGDAERIAD 271 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +R T A Y KA+ +L LP + L ++ D+ R Sbjct: 272 SIRAAGFDQATRMAAEGYLDKARAALASLPSGPEQDILQQMADYVRDR 319 >gi|254382424|ref|ZP_04997783.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1] gi|194341328|gb|EDX22294.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1] Length = 336 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 151/310 (48%), Gaps = 14/310 (4%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ S+V I + ++L+ +GGKR RP+L + + + V A +E H AT Sbjct: 31 LLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLASRFGDPYAPGIVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A WGN +VL GDFL ++A ++ EA+ + Sbjct: 91 LYHDDVMDEADVRRGVASANARWGNSVAVLTGDFLFARA-SHILADLGPEAVRIQAEAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ E YL VI KT L + + +L++G SV L YG Sbjct: 150 RLVTGQILETAGPRDGRDPVEHYLDVIAGKTGSLIAVSGRFGALMSGADESVVDILTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN------- 251 LG AFQL DDVLD + +E GK G D R G PTLPV L + R+ N Sbjct: 210 ERLGTAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPV-LRLRETAARDGNADDLELV 268 Query: 252 -FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + D + + L + +R + AL Y Q A+ +L LP+ K +L Sbjct: 269 RLLDGDLTDDAVLADVLAR----LRVHPALEQARRDTIRYAQDARATLAPLPECFAKSAL 324 Query: 311 MEVVDFCLQR 320 E+ D + R Sbjct: 325 EELCDAVVHR 334 >gi|124025385|ref|YP_001014501.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. NATL1A] gi|123960453|gb|ABM75236.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. NATL1A] Length = 323 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/293 (33%), Positives = 159/293 (54%), Gaps = 10/293 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L + H LA E IHTA+L+HDDVVD++ Sbjct: 36 AAEHLFSAGGKRLRPGIVLLISRALTSEKELPLKHRKLAQITEMIHTASLVHDDVVDEAD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + + +VL GDFL +QA + ++ E ++ LS V LAEGE++Q Sbjct: 96 TRRGVETVHSRFDPRIAVLAGDFLFAQASWHLANLENLEVVKLLSRVIMDLAEGEIKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E YL KTA L + + + +++ V +L +G LG+AFQ+VD Sbjct: 156 NRFDSSQSFESYLEKSYCKTASLIANSSKAIGVLSDVDQESLNSLYFFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV-ENLK 268 D+LD+ G ++GK D ++G T PV A E+N S + +GK S ++L Sbjct: 216 DILDFTGNDEQLGKPAASDLQSGYLTAPVFYAL------EENPRLSELINGKFSQKDDLD 269 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +A ++R++ A+ + A + ++KDS+ LPDS K +L+E+ +F + RL Sbjct: 270 QALSLVRDSSAIKKSRELAEQFASESKDSISWLPDSPSKTALLELPEFVISRL 322 >gi|307564820|ref|ZP_07627348.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A] gi|307346542|gb|EFN91851.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A] Length = 326 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 151/293 (51%), Gaps = 1/293 (0%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V+ ++ GGKR+RP+L L A A +E +HTA+L+HDDVVD+S Sbjct: 32 LLTQVLHHIKQRGGKRMRPILILLIAKSFGKVSPTTQHAAVGLELLHTASLIHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+ + + N+ +VLVGD++LS A V T S ++ L+ + TL++GE+ QL Sbjct: 92 NERRGQASVNASYNNKVAVLVGDYVLSTALQQVGYTNSNSIVKYLAELGQTLSDGEILQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S K ++TE YL +I KTA+LF + + AGV +++G N+G+ FQ+ Sbjct: 152 SNIKREEITEAAYLEIIARKTAILFEICAAIGAESAGVSEEDVALARAFGKNIGMIFQIR 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+ DY E+GK G D GK TLP+I A + + IS + ++ Sbjct: 212 DDIFDYFESEKEIGKPTGNDLTEGKLTLPLIYALNKTSDERMMMLARKAKMLSISSKEIE 271 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLMEVVDFCLQR 320 + +E + E Y KAK + + + K+SL +D+ ++R Sbjct: 272 ELVTFAKEKGGIEYAEECMKRYHAKAKVFIDTKISNPVIKQSLSTYLDYIIKR 324 >gi|328552808|gb|AEB23300.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens TA208] Length = 320 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/301 (28%), Positives = 160/301 (53%), Gaps = 10/301 (3%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SD ++ + +L+ +GGKR+RP+ L + + +Y + +A +E IH A+L+HD Sbjct: 25 VRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLEMIHMASLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ LRRGK + W N+ ++ GD++L+ + M+ +A LS + Sbjct: 85 DVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLADSLEMMTRLDEPKAHRILSKTIVEVCL 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ N++ YL IK KTA+L + + ++ ++ +G + +AL +G +G Sbjct: 145 GEIEQIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK-NFWKSTINDGK 261 +++Q++DD+LD+ E+GK +G D G TLPV+ A + R + S + Sbjct: 205 MSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALHQPELRNQLKLINSETTQEQ 264 Query: 262 IS--VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 ++ +EN+K+ I ++ A+ D Y +KA + L LP + SL + + + Sbjct: 265 LAPIIENIKRTDAI-EKSMAVSD------RYLKKAFEKLNTLPRGRARSSLAAIAKYIGK 317 Query: 320 R 320 R Sbjct: 318 R 318 >gi|108862467|gb|ABA97399.2| Prenyl transferase, putative, expressed [Oryza sativa Japonica Group] gi|222630738|gb|EEE62870.1| hypothetical protein OsJ_17673 [Oryza sativa Japonica Group] Length = 245 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/251 (34%), Positives = 142/251 (56%), Gaps = 9/251 (3%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+ +Q+ + ++ E ++ + Sbjct: 2 IHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKLI 61 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 S V A GE++Q S + D+T +DYL KTA L +A+ +++ +GV ++ + Sbjct: 62 SQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAIFSGVSTAICEQ 121 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK-REKNF 252 + YG NLG++FQ+VDD+LD+ ++GK G D G T PVI A Q + RE Sbjct: 122 MYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALQDEPQLRE--- 178 Query: 253 WKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 I D + S N L A ++ + + A G+ A SL+CLP S ++ +L Sbjct: 179 ----IIDSEFSETNSLATAIELVHRSGGIKRAHELAREKGEIAIQSLQCLPRSEFRSTLE 234 Query: 312 EVVDFCLQRLN 322 +V + L+R++ Sbjct: 235 NMVKYNLERID 245 >gi|307328645|ref|ZP_07607818.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu 4113] gi|306885757|gb|EFN16770.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu 4113] Length = 336 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 99/326 (30%), Positives = 159/326 (48%), Gaps = 12/326 (3%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + LE T + V +L+ S+V I + ++L+ +GGKR RP+L L A + Sbjct: 14 RTLEADTQAGLTAVEEGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVLLAAQFGDPHA 73 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 V A +E H ATL HDDV+D++ +RRG +A + WGN +VL GDFL ++A + Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEAEVRRGVSSANVRWGNSVAVLTGDFLFARA-SHI 132 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + EA+ + L G++ + + ++ E YL V+ KT L + + + Sbjct: 133 LADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVEHYLDVLAGKTGSLIAVSGRFGA 192 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +++G S+ L YG LG+AFQL DDVLD + +E GK G D R G TLPV+ Sbjct: 193 MMSGADESIVSILTQYGERLGMAFQLADDVLDIASDSHESGKTPGTDLREGVATLPVLYV 252 Query: 242 FQR----GTKREKNFWK---STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 +R G+ ++ + + D E L++ +R + AL Y +A Sbjct: 253 RERAEATGSAEDRELCELLAGDLTDDARHAEVLRR----LRAHPALEQARRVTVRYAAEA 308 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320 + L LP+ K +L + D + R Sbjct: 309 RSMLAPLPEGPAKAALEGLCDAVVHR 334 >gi|148643503|ref|YP_001274016.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA [Methanobrevibacter smithii ATCC 35061] gi|148552520|gb|ABQ87648.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA [Methanobrevibacter smithii ATCC 35061] Length = 330 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/293 (34%), Positives = 149/293 (50%), Gaps = 8/293 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL +GGK LRP LTL T+ + DN + A AIE IHT +L+HDD++DD +RRGK Sbjct: 36 YLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIHDDIMDDDDMRRGKP 95 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIE--------TKSQEALEALSLVACTLAEGELRQ 147 A VW ++L GD L S+AF +++ T+ + L ++ + EG+ Sbjct: 96 AVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNTPTQLSQTLATVADACVKICEGQASD 155 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 +S DV+EE+YL +I KT L +AA + +++ G V A+ YG +G+AFQ+ Sbjct: 156 MSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQI 215 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DD LD + +GK IG D GK T+ I A + + D S E++ Sbjct: 216 QDDYLDLASDEETLGKPIGSDIAKGKMTIIAIKALAASEGEDNKKLLEILKDDNNSQEDI 275 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A + + A+ + A AK L LPDS K+ L ++ DF L+R Sbjct: 276 DVALDLFNKYGAIEYAKNVALENVTSAKKLLEILPDSESKQMLFDLADFVLER 328 >gi|4836881|gb|AAD30584.1|AC007260_15 Very similar to prenyltransferases [Arabidopsis thaliana] Length = 390 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 98/325 (30%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALM--L 57 L +L D++ +N +L + ++ ++ + + +GGKR+RP L ATA + L Sbjct: 71 LFELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGL 130 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 + H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +QA Sbjct: 131 KELTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQA 190 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + ++ E ++ +S V A GE++Q S + D ++YL KTA L +A+ Sbjct: 191 SWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAAST 250 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +++ + V+ V + + +G NLG++FQ+VDD+LD+ ++GK G D G T P Sbjct: 251 KGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAP 310 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 VI A +R + + I +L++A + + + + A A + Sbjct: 311 VIFALEREPR-----LREIIESEFCEAGSLEEAIEAVTKGGGIKRAQELAREKADDAIKN 365 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 L+CLP S ++ +L ++V + L+R++ Sbjct: 366 LQCLPRSGFRSALEDMVLYNLERID 390 >gi|67921668|ref|ZP_00515186.1| Trans-hexaprenyltranstransferase [Crocosphaera watsonii WH 8501] gi|67856780|gb|EAM52021.1| Trans-hexaprenyltranstransferase [Crocosphaera watsonii WH 8501] Length = 323 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 155/291 (53%), Gaps = 10/291 (3%) Query: 35 KYLIFSGGKRLRPMLTL----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 ++L +GGKR+RP + L AT L LE H LA E IHTA+L+HDDVVD++AL Sbjct: 38 EHLFDAGGKRIRPAIVLLVSRATMLDLEITS-RHRRLAEITEMIHTASLVHDDVVDEAAL 96 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RR ++ N+ +VL GDFL +Q+ + + + ++ LS V AEGE+ Q Sbjct: 97 RRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLQVVKLLSEVIRDFAEGEIFQGIN 156 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + +T E YL KTA L + + + +++++ V +L +YG LG+AFQ+VDD Sbjct: 157 RFDTSLTLEAYLDKSYYKTASLMANSSKSAAILSDASAEVIDSLYNYGKYLGLAFQIVDD 216 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 +LD+ +GK G D +G T P + A + E + +G I KA Sbjct: 217 ILDFTSPTEVLGKPSGSDLISGNITAPALFAMEETPYLETLIQREFSEEGDI-----DKA 271 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 I+ E++ + ++ A +GQ A L CL S + +SL ++VD+ L RL Sbjct: 272 LSIISESQGIERSQELAAYHGQLALKQLACLKPSPYSQSLTDIVDYVLSRL 322 >gi|145327729|ref|NP_001077840.1| SPS1 (solanesyl diphosphate synthase 1); trans-octaprenyltranstransferase [Arabidopsis thaliana] gi|332197994|gb|AEE36115.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana] Length = 367 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/323 (30%), Positives = 174/323 (53%), Gaps = 11/323 (3%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALM--LEY 59 +L D++ +N +L + ++ ++ + + +GGKR+RP L ATA + L+ Sbjct: 50 ELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKE 109 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +QA Sbjct: 110 LTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASW 169 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + ++ E ++ +S V A GE++Q S + D ++YL KTA L +A+ + Sbjct: 170 YLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKG 229 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++ + V+ V + + +G NLG++FQ+VDD+LD+ ++GK G D G T PVI Sbjct: 230 AAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVI 289 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A +R + + I +L++A + + + + A A +L+ Sbjct: 290 FALEREPR-----LREIIESEFCEAGSLEEAIEAVTKGGGIKRAQELAREKADDAIKNLQ 344 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 CLP S ++ +L ++V + L+R++ Sbjct: 345 CLPRSGFRSALEDMVLYNLERID 367 >gi|303289847|ref|XP_003064211.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454527|gb|EEH51833.1| predicted protein [Micromonas pusilla CCMP1545] Length = 324 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 154/288 (53%), Gaps = 12/288 (4%) Query: 40 SGGKRLRPMLTL----ATALMLEYR--GDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +GGKRLRP+L +TA +++ D LA E IHTA+L+HDDV+DD RRG Sbjct: 42 AGGKRLRPVLVFLVARSTAQLMDMPEITDRQRRLAEITEMIHTASLVHDDVLDDCDTRRG 101 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 ++G + ++L GDFL +Q+ + + E ++ +S V A+GE+ Q N Sbjct: 102 AQTIHTLYGTRVAILAGDFLFAQSSWYLANLDNLEVIKLISQVIADFADGEISQAGALFN 161 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 DVT E YL +KTA L +A+ + +++ + V ++ + YG +LG+AFQ+VDD+LD Sbjct: 162 CDVTLEGYLEKSHNKTASLIAASCKSAAVFSEVSEDIKVDMYEYGKHLGLAFQVVDDILD 221 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 + ++GK G+D +G T P I A +R +G +L+KA I Sbjct: 222 FTQTEEQLGKPQGQDLASGNLTAPTIFALRRDASLRALVESQFKTEG-----DLEKAIAI 276 Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 + E + D A A +L+ LP+ K+SL+++V + L+R+ Sbjct: 277 VNE-VGIEDARTLAREEADMALAALKGLPEGEAKQSLVDMVQYILERI 323 >gi|299538563|ref|ZP_07051846.1| heptaprenyl diphosphate synthase component II [Lysinibacillus fusiformis ZC1] gi|298726150|gb|EFI66742.1| heptaprenyl diphosphate synthase component II [Lysinibacillus fusiformis ZC1] Length = 324 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 93/310 (30%), Positives = 158/310 (50%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+E + + K + S +I D +L+ +GGKR+RP+ L A +Y + +A Sbjct: 16 DIEIIEQELEKAVDSSSYLINDASLHLLQAGGKRIRPIFVLLGAKFGDYDIEKMKDVAVP 75 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH A+L+HDDV+DDS +RRG+ + W N+ ++ GDF+ ++A + + + Sbjct: 76 LELIHMASLVHDDVIDDSNMRRGRPTVKSQWNNRVAMYTGDFIFARALEYITKLEDPLVH 135 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ + GE+ Q+ LD +DY IK KTA+L S++ E+ ++ AGV Sbjct: 136 QILARTMVEICNGEVIQIEDKFRLDQGLKDYFRRIKRKTALLISSSCELGAVAAGVDTKT 195 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + LK +G +G++FQ++DDVLD E+GK G D G TLP++L E Sbjct: 196 VRHLKRFGYFVGMSFQIIDDVLDIMATDKELGKPAGSDLLQGNITLPILLL---KDDPEM 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + G ++ + +R++ A+ + Y +KA + LP KK L Sbjct: 253 QPYLVKVFAGTLTESERQNMLQYVRKSHAIEQANRMSDKYLKKALQEIDALPKHPVKKKL 312 Query: 311 MEVVDFCLQR 320 +V F +R Sbjct: 313 RDVALFMGKR 322 >gi|300727537|ref|ZP_07060928.1| polyprenyl synthetase [Prevotella bryantii B14] gi|299775240|gb|EFI71841.1| polyprenyl synthetase [Prevotella bryantii B14] Length = 325 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 151/301 (50%), Gaps = 18/301 (5%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V+ ++ GKR+RPML L A D + A +E +HTA+L+HDDVVD+S Sbjct: 32 LLSQVLDHIKQRAGKRMRPMLILLMAKNFGKVSDVSLNAAVGLELLHTASLVHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+ + + N+ +VLVGD+LLS A V T S+ + LS + TL+ GE+ QL Sbjct: 92 DERRGQASVNASYNNKVAVLVGDYLLSTALLYVSYTHSEVIVRYLSELGRTLSNGEILQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S +N ++E+ Y VI KTA LF A + + AG + A + +G LG+ FQ+ Sbjct: 152 SNIQNRTISEDAYYDVISMKTAALFEACAVIGAESAGASHEDTMAAREFGKKLGLIFQIR 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+ DY + E+GK D GK TLPVI A +E + D ++ E + Sbjct: 212 DDIFDYY-DSKEIGKPTSNDMVEGKLTLPVIYALNSTDNKEMLELAYKVKDHTVTDEEVA 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CL-------PDSSWKKSLMEVVDFCLQ 319 + +EN + +Y K D L C+ + KKS+ +D+ + Sbjct: 271 QLVQFTKENGGI--------NYAYKIMDRLHEECMIFIDEYVTNPEIKKSITAYLDYVSE 322 Query: 320 R 320 R Sbjct: 323 R 323 >gi|296332988|ref|ZP_06875445.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674908|ref|YP_003866580.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii str. W23] gi|296149839|gb|EFG90731.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413152|gb|ADM38271.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii str. W23] Length = 320 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 159/298 (53%), Gaps = 4/298 (1%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SD ++ + +L+ +GGKR+RP+ L + + +Y + +A +E IH A+L+HD Sbjct: 25 VRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLEMIHMASLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ LRRGK + W N+ ++ GD++L+ + M+ +A LS + Sbjct: 85 DVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ N++ YL IK KTA+L + + ++ ++ +G + +AL +G +G Sbjct: 145 GEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +++Q++DD+LD+ E+GK +G D G TLPV+ A + KN K + + + Sbjct: 205 MSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALENPAL--KNQLK--LINSET 260 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + E L+ +++ A+ + + Y QKA + L LP + SL + + +R Sbjct: 261 TQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFEKLNTLPRGRARSSLAAIAKYIGKR 318 >gi|222444999|ref|ZP_03607514.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii DSM 2375] gi|222434564|gb|EEE41729.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii DSM 2375] Length = 335 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/293 (34%), Positives = 149/293 (50%), Gaps = 8/293 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL +GGK LRP LTL T+ + DN + A AIE IHT +L+HDD++DD +RRGK Sbjct: 41 YLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIHDDIMDDDDMRRGKP 100 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIE--------TKSQEALEALSLVACTLAEGELRQ 147 A VW ++L GD L S+AF +++ T+ + L ++ + EG+ Sbjct: 101 AVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNTPTQLSQTLATVADACVKICEGQASD 160 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 +S DV+EE+YL +I KT L +AA + +++ G V A+ YG +G+AFQ+ Sbjct: 161 MSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQI 220 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DD LD + +GK IG D GK T+ I A + + D S E++ Sbjct: 221 QDDYLDLASDEETLGKPIGSDIAKGKMTIIAIKALAASEGEDNKKLLEILKDDNNSQEDI 280 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A + + A+ + A AK L LPDS K+ L ++ DF L+R Sbjct: 281 DIALDLFNKYGAIEYAKNVALENVASAKKVLEILPDSESKQMLFDLADFVLER 333 >gi|30699332|ref|NP_177972.2| SPS1 (solanesyl diphosphate synthase 1); trans-octaprenyltranstransferase [Arabidopsis thaliana] gi|19911233|dbj|BAB86941.1| solanesyl diphosphate synthase [Arabidopsis thaliana] gi|57999783|dbj|BAD88533.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana] gi|98960969|gb|ABF58968.1| At1g78510 [Arabidopsis thaliana] gi|332197993|gb|AEE36114.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana] Length = 406 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/323 (30%), Positives = 174/323 (53%), Gaps = 11/323 (3%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALM--LEY 59 +L D++ +N +L + ++ ++ + + +GGKR+RP L ATA + L+ Sbjct: 89 ELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKE 148 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +QA Sbjct: 149 LTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASW 208 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + ++ E ++ +S V A GE++Q S + D ++YL KTA L +A+ + Sbjct: 209 YLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKG 268 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++ + V+ V + + +G NLG++FQ+VDD+LD+ ++GK G D G T PVI Sbjct: 269 AAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVI 328 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A +R + + I +L++A + + + + A A +L+ Sbjct: 329 FALEREPR-----LREIIESEFCEAGSLEEAIEAVTKGGGIKRAQELAREKADDAIKNLQ 383 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 CLP S ++ +L ++V + L+R++ Sbjct: 384 CLPRSGFRSALEDMVLYNLERID 406 >gi|124494325|gb|ABN13218.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494345|gb|ABN13237.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii str. W23] gi|124494365|gb|ABN13256.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494405|gb|ABN13294.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] Length = 348 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 159/298 (53%), Gaps = 4/298 (1%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SD ++ + +L+ +GGKR+RP+ L + + +Y + +A +E IH A+L+HD Sbjct: 53 VRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLEMIHMASLVHD 112 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ LRRGK + W N+ ++ GD++L+ + M+ +A LS + Sbjct: 113 DVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL 172 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ N++ YL IK KTA+L + + ++ ++ +G + +AL +G +G Sbjct: 173 GEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVG 232 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +++Q++DD+LD+ E+GK +G D G TLPV+ A + KN K + + + Sbjct: 233 MSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALENPAL--KNQLK--LINSET 288 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + E L+ +++ A+ + + Y QKA + L LP + SL + + +R Sbjct: 289 TQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFEKLNTLPRGRARSSLAAIAKYIGKR 346 >gi|124494424|gb|ABN13312.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] Length = 348 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 159/298 (53%), Gaps = 4/298 (1%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SD ++ + +L+ +GGKR+RP+ L + + +Y + +A +E IH A+L+HD Sbjct: 53 VRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLEMIHMASLVHD 112 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ LRRGK + W N+ ++ GD++L+ + M+ +A LS + Sbjct: 113 DVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL 172 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ N++ YL IK KTA+L + + ++ ++ +G + +AL +G +G Sbjct: 173 GEIEQIKGKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVG 232 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +++Q++DD+LD+ E+GK +G D G TLPV+ A + KN K + + + Sbjct: 233 MSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALENPAL--KNQLK--LINSET 288 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + E L+ +++ A+ + + Y QKA + L LP + SL + + +R Sbjct: 289 TQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFEKLNTLPRGRARSSLAAIAKYIGKR 346 >gi|124494465|gb|ABN13351.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494485|gb|ABN13370.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494505|gb|ABN13389.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494525|gb|ABN13408.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] Length = 348 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 159/298 (53%), Gaps = 4/298 (1%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SD ++ + +L+ +GGKR+RP+ L + + +Y + +A +E IH A+L+HD Sbjct: 53 VRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLEMIHMASLVHD 112 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ LRRGK + W N+ ++ GD++L+ + M+ +A LS + Sbjct: 113 DVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL 172 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ N++ YL IK KTA+L + + ++ ++ +G + +AL +G +G Sbjct: 173 GEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVG 232 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +++Q++DD+LD+ E+GK +G D G TLPV+ A + KN K + + + Sbjct: 233 MSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALENPAL--KNQLK--LINSET 288 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + E L+ +++ A+ + + Y QKA + L LP + SL + + +R Sbjct: 289 TQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFEKLNTLPRGRARSSLAAIAKYIGKR 346 >gi|196230032|ref|ZP_03128895.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428] gi|196225629|gb|EDY20136.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428] Length = 330 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/286 (33%), Positives = 151/286 (52%), Gaps = 12/286 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V Y + S GKRLRP L L +H+ LA +E IH ATL+HDD++D + RRG Sbjct: 40 VAYAVESHGKRLRPALALLAGGATGNICPSHLDLAVILELIHAATLVHDDILDGADKRRG 99 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 + A WGN SVL+GD L + A + + E ++ A + GE+ Q + Sbjct: 100 QPTANAKWGNAISVLLGDCLFAHALKLSTSFPNGEISRRIAHAASEVCSGEIIQTQRRFD 159 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 L ++ DY +I+ KTA LF+AA E+ +LI V AL+ +G+ LG A+Q+ DDVLD Sbjct: 160 LKLSVPDYYKIIEMKTAALFAAACELGALINEAAPEVIDALRIFGLQLGTAYQIYDDVLD 219 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 G+ + GK +G D R GK TLP++ Q + E++ I +G +A I+ Sbjct: 220 LAGDEAKAGKTLGSDLRKGKLTLPILHLLQISDEAERHRLSEIILNG-------DEADIL 272 Query: 274 MRENRALVDTEYR-AYSYGQK----AKDSLRCLPDSSWKKSLMEVV 314 +A+ + A + G+K A+ L+ +P++ ++ +L +V Sbjct: 273 ALAEKAIAAGAVKSAIATGRKMLREAEGRLQIVPENKYRDALGGLV 318 >gi|220905174|ref|YP_002480486.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869473|gb|ACL49808.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 321 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 102/301 (33%), Positives = 160/301 (53%), Gaps = 11/301 (3%) Query: 27 VEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACAIEFIHTATLLH 81 VE++P+ V +++ +GGKRLRP+LT+ TA +L + R D H L A +E +H ATLLH Sbjct: 23 VEVLPEPVRPVTRHIFEAGGKRLRPLLTVLTARLLGHDREDIHDL-AVTLEMLHAATLLH 81 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DDV+D++ RRGK AA ++ + +L GD LL++A V S A Sbjct: 82 DDVLDNAMSRRGKPAAHTLYNVSSVILAGDALLAEANAQVARRGDPRLTRCFSEATSRTA 141 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 GE+ +++ +D + Y +++ KTA L AA E+ +L A + A +YG NL Sbjct: 142 AGEILEIAAQGRVDTSAGHYEEIVRGKTAWLIRAACEMGALAAEADEASVAAAAAYGENL 201 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G+AFQ+VDD LD+ E + GK G D R GK T P+ L E+ + + Sbjct: 202 GMAFQMVDDALDFAPE-SATGKPTGGDVREGKLTPPLRLYRDSLNDAEREAFDAAFAGFA 260 Query: 262 ISVENLKKAFIIMRENRALVDTEYR--AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 +S + + + +RE A DT R A ++ A+ +L LPD +K ++++ D+ Sbjct: 261 MSAADAESVALRIRE--AGFDTAVRRQADTFLDAARRALHSLPDRPERKVMLKMTDYVRD 318 Query: 320 R 320 R Sbjct: 319 R 319 >gi|322381820|ref|ZP_08055774.1| heptaprenyl diphosphate synthase component II-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154208|gb|EFX46530.1| heptaprenyl diphosphate synthase component II-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 324 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 95/314 (30%), Positives = 159/314 (50%), Gaps = 6/314 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KD+ + + + I D+ + D + +GGKR+RP+ L Y + +A Sbjct: 12 KDIAFIEKSLERSIDVDLPTLRDASLLYLKAGGKRIRPVFVLLAGEFGHYDLERMKHIAV 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IH A+L+HDDV+DD+ RRGK R W N+ ++ GD++ ++A +V E K+ Sbjct: 72 PLELIHMASLVHDDVIDDAETRRGKATVRSKWDNRIAMYTGDYVYAKALTLVTELKNPAI 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + +S ++ GE+ Q+ L T DYL IK KTA+L + + ++ ++ A + Sbjct: 132 HQIMSKAMIEMSIGEMEQIRLFFEHGQTLRDYLRRIKRKTALLIAVSCQLGAMTAEASEN 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L +G +G+AFQ+ DD+LD G ++GK G D + G TLPV+ A Q R+ Sbjct: 192 YAKRLFHFGYYVGMAFQIRDDILDLVGTEKQIGKPPGSDIKQGNITLPVLYALQEPKLRK 251 Query: 250 ---KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + DG+ V ++RE+ + + A + QKA S+ LPD Sbjct: 252 PMLEELDRIRKADGQTDVSRF---LNLVRESGGIEKADEIAETCIQKAIASIDPLPDIQA 308 Query: 307 KKSLMEVVDFCLQR 320 KK L+ + F +R Sbjct: 309 KKDLVNIAYFIAKR 322 >gi|11465411|ref|NP_045198.1| prenyl transferase [Cyanidium caldarium] gi|14195057|sp|Q9TLS1|PREA_CYACA RecName: Full=Prenyl transferase gi|6466314|gb|AAF12896.1|AF022186_18 unknown [Cyanidium caldarium] Length = 323 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 152/289 (52%), Gaps = 8/289 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALR 91 K+L+ K++RP + L A ++ + LA E IHTATLLHDDVVD+S +R Sbjct: 38 KHLLIVESKKIRPAIVLLVAKAIDKNKKIKTSQQRLAEVTEIIHTATLLHDDVVDESIIR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG + +GN+ +V GDFL +Q+ + + E ++A+S V LAEGEL+Q Sbjct: 98 RGTKSVNKTFGNKIAVFAGDFLFAQSSWYLANINNLEVVKAISKVITDLAEGELQQNLTQ 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 N + YL +KTA L +A+ + L++ S+ +YG NLG+AFQ++DD+ Sbjct: 158 FNTYYSIIKYLEKSFNKTASLIAASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD +GK D + G T PV+ A + +K K + IS +A Sbjct: 218 LDITSSSTALGKMTTSDLKLGNLTAPVLFALTKNSKLFKIIEREFCEKSDIS-----EAI 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I++E A+ ++ AY + + A +S++ LP SS K SL+E+ L R Sbjct: 273 NIIKETNAIEESFDLAYEHIEAAINSIKDLPTSSEKDSLIEIAYDLLNR 321 >gi|303243472|ref|ZP_07329814.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1] gi|302486033|gb|EFL48955.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1] Length = 319 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 87/291 (29%), Positives = 153/291 (52%), Gaps = 7/291 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 K+L+F+GGKR+RP L T ++ + D + A A+E IH TL+HDD++D+ RRG+ Sbjct: 31 KHLLFAGGKRIRPYLATLTYMLKKDNLDEILPPAVAVELIHNYTLIHDDIMDNDDERRGR 90 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACTLAEGELRQLSL 150 + +G ++L GD L ++AF + K+ E L+ALS + EG+ + Sbjct: 91 TTVHVEYGEPIAILAGDLLYAKAFEAISNIKDPKKAHEVLKALSKACVEVCEGQAMDMEF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 ++ +DY +I KT L A +E+ +++A + R AL Y +G+ FQ+ DD Sbjct: 151 EDRDKISLDDYFEMISKKTGALIIAPIEIGAIMAECTDEERNALYEYAKRIGMTFQIQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 VLD G+ ++GK +G D R GK T+ V+ A + +K + + + E +K+A Sbjct: 211 VLDLIGDNKKIGKPVGSDIREGKKTVIVLHALENLPNNKKERLLKILGNNNATDEEIKEA 270 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 I+ ++ + + ++AK+ L+ D+ +K L + DF + R+ Sbjct: 271 IDILGDSINYAKNIMKNAT--EEAKNYLKIF-DAEKRKRLEAIADFIMDRV 318 >gi|237716862|ref|ZP_04547343.1| octaprenyl-diphosphate synthase [Bacteroides sp. D1] gi|262405631|ref|ZP_06082181.1| heptaprenyl diphosphate synthase component II protein [Bacteroides sp. 2_1_22] gi|294644424|ref|ZP_06722187.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a] gi|294810418|ref|ZP_06769075.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b] gi|298484258|ref|ZP_07002422.1| polyprenyl synthetase [Bacteroides sp. D22] gi|229442845|gb|EEO48636.1| octaprenyl-diphosphate synthase [Bacteroides sp. D1] gi|262356506|gb|EEZ05596.1| heptaprenyl diphosphate synthase component II protein [Bacteroides sp. 2_1_22] gi|292640259|gb|EFF58514.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a] gi|294442383|gb|EFG11193.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b] gi|295085933|emb|CBK67456.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens XB1A] gi|298269583|gb|EFI11180.1| polyprenyl synthetase [Bacteroides sp. D22] Length = 324 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 94/291 (32%), Positives = 150/291 (51%), Gaps = 7/291 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 VV ++ GK +RP+L L A + + + A ++E +HTA+L+HDDVVD+S RR Sbjct: 36 VVSHIRQRNGKMMRPILVLLVARLYGAVCPSTLHAAVSLELLHTASLVHDDVVDESTERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VL GD+LL+ + T S ++ +S + LA+GEL QLS Sbjct: 96 GQLSVNAIFNNKVAVLTGDYLLATSLVHAELTNSHRIIQLVSTLGQDLADGELLQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N +EE Y VI+ KTA LF+A + ++ GV + + G +GI FQ+ DD+ Sbjct: 156 NHSFSEEVYFDVIRKKTAALFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E+GK G D GK TLP + E + +G +++ + Sbjct: 216 DYFDN-REIGKPTGNDMLEGKLTLPALYVLNTTKNDEAQELAIKVKEGAATLDEIAHLIS 274 Query: 273 IMRENRALVDTEYRAYS---YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++EN + EY + Y QKA D L LP+S +L +D+ + R Sbjct: 275 FIKENGGI---EYAVQTMNIYKQKAFDLLASLPESDICVALRAYLDYVVDR 322 >gi|81301171|ref|YP_401379.1| trans-hexaprenyltranstransferase [Synechococcus elongatus PCC 7942] gi|81170052|gb|ABB58392.1| Trans-hexaprenyltranstransferase [Synechococcus elongatus PCC 7942] Length = 323 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 16/294 (5%) Query: 36 YLIFSGGKRLRP--MLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +L +GGKRLRP +L L+ A M + H LA E IHTA+L+HDDVVD+S+LRR Sbjct: 39 HLFGAGGKRLRPAVVLLLSRATMPGQEITPRHRRLAEITEMIHTASLVHDDVVDESSLRR 98 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G + N+ +VL GDFL +QA + S ++ LS V LAEGE+ Q Sbjct: 99 GIPTVHSSFSNRVAVLAGDFLFAQASWHLAHLDSLTVVKLLSQVIMDLAEGEILQGLNRF 158 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + ++ E YL KTA L + + + +++G +V AL YG +LG+AFQ+VDD+L Sbjct: 159 DSSLSIEVYLDKSYYKTASLLANSARAAGVLSGSSETVCDALYDYGRSLGLAFQIVDDIL 218 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR----EKNFWKSTINDGKISVENLK 268 D+ G +GK G D +G T P + A + E+ F ++ ++ + Sbjct: 219 DFTGSEEVLGKPAGSDLASGNLTAPALYAIEEHPALVPLIEREFSQA---------QDFE 269 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +A ++ ++ L T A + QKA +L LP S K++L+ + + L RL+ Sbjct: 270 QAIALVHNSQGLARTRALAAEHAQKAVQALDVLPASDCKETLISLTSYVLSRLS 323 >gi|52080783|ref|YP_079574.1| heptaprenyl diphosphate synthase component II [Bacillus licheniformis ATCC 14580] gi|52786153|ref|YP_091982.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus licheniformis ATCC 14580] gi|319645260|ref|ZP_07999493.1| HepT protein [Bacillus sp. BT1B_CT2] gi|52003994|gb|AAU23936.1| heptaprenyl diphosphate synthase component II [Bacillus licheniformis ATCC 14580] gi|52348655|gb|AAU41289.1| HepT [Bacillus licheniformis ATCC 14580] gi|317393069|gb|EFV73863.1| HepT protein [Bacillus sp. BT1B_CT2] Length = 320 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 88/313 (28%), Positives = 166/313 (53%), Gaps = 10/313 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+E + + K + SD ++ + +L+ +GGKR+RP+ L + + EY +A + Sbjct: 13 DIELIEKELEKTVHSDYPLLSEASLHLLQAGGKRIRPVFVLLSGMFGEYDISKIKNVAVS 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD+L +++ + + +A Sbjct: 73 LELIHMASLVHDDVIDDAELRRGQPTIKAKWDNRIAMYTGDYLFARSLEAMTKINEPKAH 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E LS + GE+ Q+ N++ YL I+ KTA+L +++ ++ ++ AG ++ Sbjct: 133 EILSKAIVEVCLGEIEQIKDKYNMEQNLRTYLRRIRRKTALLIASSCQLGAIAAGAGENI 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L +G +G+++Q++DD+LD+ E+GK +G D G TLPV+ A + + + Sbjct: 193 HKTLYWFGYYVGMSYQIIDDILDFTSSEKELGKPVGSDLLQGNVTLPVLYARKSPELKAR 252 Query: 251 NFW---KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++T K +E LKK I + R + Y KA + L LP + + Sbjct: 253 LMLVNSETTPEQIKPVIEELKKTDAIEQSFRV-------SEMYLNKAFELLETLPKNRAR 305 Query: 308 KSLMEVVDFCLQR 320 +L ++ + +R Sbjct: 306 TALGQIAKYIGKR 318 >gi|294675118|ref|YP_003575734.1| polyprenyl synthetase family protein [Prevotella ruminicola 23] gi|294472825|gb|ADE82214.1| polyprenyl synthetase family protein [Prevotella ruminicola 23] Length = 324 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 150/292 (51%), Gaps = 1/292 (0%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 M+ ++K++ GGKR+RPML TA L D A +E +HTA+L+HDDVVD+S Sbjct: 32 MLEQILKHIRERGGKRMRPMLVFLTARNLGEISDVTQNAALGLELLHTASLVHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 + RRG+ + + N+ +VLVGD++LS A V + + ++ L+ + LA GE+ QL Sbjct: 92 SERRGQPSVNAAYNNKVAVLVGDYILSTALLRVALSDNHRIVQHLAELGRKLAAGEVLQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S N D++E+ Y VI KTAVLF + + ++ G + + +G N+G+ FQ+ Sbjct: 152 SNISNQDISEDVYYQVIDQKTAVLFESCCILGAISVGASEEMIEKAAKFGHNVGMIFQIR 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+ DY E+GK G D GK TLP+I + + + G I+ + + Sbjct: 212 DDIFDYYDSA-EIGKPTGNDMLEGKLTLPIIYSLTHYSSSAMLTLAKKVKSGTINKDEIA 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ + E + + ++A+ + + S +D+ +QR Sbjct: 271 VLIEFAKQYGGIKYAERKMEEFAREARSFIDECVKPELQDSFKAYLDYVIQR 322 >gi|311068789|ref|YP_003973712.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus 1942] gi|310869306|gb|ADP32781.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus 1942] Length = 320 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 84/298 (28%), Positives = 155/298 (52%), Gaps = 4/298 (1%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SD ++ + +L+ +GGKR+RP+ L + + Y + +A +E IH A+L+HD Sbjct: 25 VRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGNYDINKIKYVAVTLEMIHMASLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ LRRGK + W N+ ++ GD++L+ + M+ +A LS + Sbjct: 85 DVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ N++ YL IK KTA+L + + ++ ++ +G V +AL +G +G Sbjct: 145 GEIEQIKDKYNMEQNLRTYLRRIKRKTAILIAVSCQLGAIASGADEKVHKALYWFGYYVG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +++Q++DD+LD+ E+GK +G D G TLPV+ A + R + + + + Sbjct: 205 MSYQIIDDILDFTSTEEELGKPVGGDLLQGNITLPVLYALEHPGLRN----QLKLINSET 260 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + E L +++ A+ + + Y +KA L LP + SL + + +R Sbjct: 261 TQEQLNPIIEEIKKTNAIKKSMDVSEMYLEKAFQKLNTLPRGRARSSLASIAKYIGKR 318 >gi|218438214|ref|YP_002376543.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7424] gi|218170942|gb|ACK69675.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7424] Length = 323 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 157/290 (54%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRPMLTL--ATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP + L + A ML+ H LA E IHTA+L+HDDVVD++ LR Sbjct: 38 EHLFDAGGKRIRPAIVLLVSKATMLDQEITSRHRRLAEITEMIHTASLVHDDVVDEAELR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 R ++ N+ +VL GDFL +Q+ + + E ++ LS V AEGE++Q Sbjct: 98 RNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEIQQGINQ 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +T + YL KTA L + + + +S+++ V + + L +YG LG+AFQ+VDD+ Sbjct: 158 FDTGITLDAYLEKSYYKTASLMANSAKAASVLSDVGRDITEHLYNYGRYLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ +GK G D +G T P + A + E + DG +L+KA Sbjct: 218 LDFTSPTEVLGKPAGSDLASGNITAPALYAMEENPYLEVLIEREFSEDG-----DLEKAL 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++ E+ + + A +Y Q A +L+CL S ++L ++VD+ L R+ Sbjct: 273 NLVMESNGIERSRELASNYSQLALQNLKCLQPSPSGQALQDIVDYNLSRI 322 >gi|256004586|ref|ZP_05429564.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum DSM 2360] gi|281417278|ref|ZP_06248298.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum JW20] gi|255991458|gb|EEU01562.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum DSM 2360] gi|281408680|gb|EFB38938.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum JW20] gi|316940696|gb|ADU74730.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313] Length = 318 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 6/300 (2%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 I K I S ++ + V ++ SGGKRLRP + + +Y + A AIE +HTA Sbjct: 19 FIQKNIRSRNRLLNEAVSSIVKSGGKRLRPAFVILASQFGKYNRKKVIPAAAAIEILHTA 78 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TL+HDDVVD + RRG+V +G +V VGD+L ++A ++ ++ L L+ Sbjct: 79 TLIHDDVVDRTKFRRGQVTISEKFGVDMAVYVGDYLYTKAVLLLAGNVPEKRLSILAKGI 138 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + EGE+ Q ++D + YL I KTAVLFSAA + + IA V ++L Sbjct: 139 KAICEGEVDQYQHKYSIDTSVYTYLKRIGRKTAVLFSAACALGAYIAKCPQEVSRSLVKL 198 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ-RGTKRE--KNFWK 254 G+ G+AFQ+ DD+ +Y E K +G D G TLPVIL + + RE KNF Sbjct: 199 GLYYGMAFQIKDDINNYTKAQYEEDKPVGNDILEGIITLPVILGLKLKPELREPLKNFLD 258 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 G ++ + + +++E+ + ++ Y +KA ++ LPD+ +KK+ ++ Sbjct: 259 ---KKGNVTEDEAARVVQLIKESGGVEESRVFLNKYVEKALKEIQNLPDNEYKKAFERII 315 >gi|125973083|ref|YP_001036993.1| trans-hexaprenyltranstransferase [Clostridium thermocellum ATCC 27405] gi|125713308|gb|ABN51800.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum ATCC 27405] Length = 318 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 6/300 (2%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 I K I S ++ + V ++ SGGKRLRP + + +Y + A AIE +HTA Sbjct: 19 FIQKNIRSRNRLLNEAVSSIVKSGGKRLRPAFVILASQFGKYNRKKVIPAAAAIEILHTA 78 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TL+HDDVVD + RRG+V +G +V VGD+L ++A ++ ++ L L+ Sbjct: 79 TLIHDDVVDRTKFRRGQVTISEKFGVDMAVYVGDYLYTKAVLLLAGNVPEKRLSILAKGI 138 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + EGE+ Q ++D + YL I KTAVLFSAA + + IA V ++L Sbjct: 139 KAICEGEVDQYQHKYSIDTSVYTYLKRIGRKTAVLFSAACALGAYIAKCPQEVSRSLVKL 198 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ-RGTKRE--KNFWK 254 G+ G+AFQ+ DD+ +Y E K +G D G TLPVIL + + RE KNF Sbjct: 199 GLYYGMAFQIKDDINNYTKAQYEEDKPVGNDILEGIITLPVILGLKLKPELREPLKNFLD 258 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 G ++ + + +++E+ + ++ Y +KA ++ LPD+ +KK+ ++ Sbjct: 259 ---KKGNVTEDEAARVVQLIKESGGVEESRVFLNKYVEKALKEIQNLPDNEYKKAFERII 315 >gi|154686522|ref|YP_001421683.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus amyloliquefaciens FZB42] gi|154352373|gb|ABS74452.1| HepT [Bacillus amyloliquefaciens FZB42] Length = 349 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 88/301 (29%), Positives = 160/301 (53%), Gaps = 10/301 (3%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SD ++ + +L+ +GGKR+RP+ L + + +Y + +A +E IH A+L+HD Sbjct: 54 VRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLEMIHMASLVHD 113 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ LRRGK + W N+ ++ GD++L+ + M+ +A LS + Sbjct: 114 DVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRLDEPKAHRILSKTIVEVCL 173 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ N++ YL IK KTA+L + + ++ ++ +G + +AL +G +G Sbjct: 174 GEIEQIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVG 233 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF-QRGTKREKNFWKSTINDGK 261 +++Q++DD+LD+ E+GK +G D G TLPV+ A Q K + S + Sbjct: 234 MSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALRQPELKNQLKLINSETTQEQ 293 Query: 262 IS--VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 ++ +EN+K+ I ++ A+ D Y +KA + L LP + SL + + + Sbjct: 294 LAPIIENIKRTDAI-EKSMAVSD------RYLKKAFEKLNTLPRGRARSSLAAIAKYIGK 346 Query: 320 R 320 R Sbjct: 347 R 347 >gi|148242258|ref|YP_001227415.1| prenyl transferase [Synechococcus sp. RCC307] gi|147850568|emb|CAK28062.1| Prenyl transferase [Synechococcus sp. RCC307] Length = 323 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 158/296 (53%), Gaps = 16/296 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L+ G+ H LA E IHTA+L+HDDVVD++ Sbjct: 36 AAEHLFSAGGKRLRPGIVLLLSRALDPAGELSLRHRRLAQITEMIHTASLVHDDVVDEAN 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + ++ +VL GDFL +Q+ + E ++ LS V LAEGE+RQ Sbjct: 96 TRRGVPTVHSRFNSRVAVLAGDFLFAQSSWHLANLDDLEVVKLLSRVIMDLAEGEIRQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E YL KTA L + + + + +++ ++ L S+G LG+AFQ+VD Sbjct: 156 FRYDTGQSLETYLEKSYWKTASLIANSAKAAGVLSELERDQLNQLHSFGRQLGLAFQIVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR----EKNFWKSTINDGKISVE 265 D+LD+ G +++GK D +G T PVI A + E+ F + + Sbjct: 216 DILDFTGSDDQLGKPAASDLASGTLTAPVIYAMEEHPSLAVLIEREFSEP---------D 266 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +L +A ++R+++ + A S +++ +L+ LP S+ + +LME+ DF L RL Sbjct: 267 DLDQALGLVRQSQGIQRARALAESMARESTTNLKFLPASASRDALMELPDFVLSRL 322 >gi|300742151|ref|ZP_07072172.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Rothia dentocariosa M567] gi|300381336|gb|EFJ77898.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Rothia dentocariosa M567] Length = 353 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 160/310 (51%), Gaps = 16/310 (5%) Query: 20 LKRICSDVEMIPDVV-KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 L S + + DV ++L+ +GGKR+RP+LTL A + D+ + A +E H AT Sbjct: 49 LAEAISYTDKLADVAARHLLLAGGKRVRPLLTLLAAAVDGQINDDVIEAAVVVELTHLAT 108 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+DD+ RRG A+ +WGN ++L GD + S+A +V + ++ + + A Sbjct: 109 LYHDDVMDDAPKRRGVDTAQTIWGNSVAILTGDLIFSRASLLVSDLGTRP----MKIQAQ 164 Query: 139 TLAEGELRQL----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 T L QL + +N D+ + Y+ VI+ KT L +AA E SL+AG V Q L Sbjct: 165 TFERLVLGQLYETTGVRENQDILDH-YISVIEGKTGSLIAAAGEYGSLLAGASEEVIQML 223 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL---AFQRGTKREKN 251 +YG +G+AFQL DDV+D + GK G D R G PTLP IL A + G + + Sbjct: 224 ATYGELVGVAFQLADDVIDIVSDGASSGKTQGTDLREGVPTLPTILLNRAAEAGDESARQ 283 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSL 310 T+ + +S ++ A + + ++ AY + +A ++ LP+S+ K +L Sbjct: 284 V--RTLIEADLSSDDALAAAVSALAAHPVTQEAWQIAYDWADRAIAAIAPLPESTAKAAL 341 Query: 311 MEVVDFCLQR 320 + R Sbjct: 342 ESFAHAVVHR 351 >gi|159026272|emb|CAO88848.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 323 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 154/290 (53%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRPMLTL--ATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP + L + A ML+ H LA E IHTA+L+HDDVVD++ LR Sbjct: 38 EHLFEAGGKRVRPAIVLLVSRATMLDRDITPRHRRLAEITEMIHTASLVHDDVVDEAELR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 R ++ N+ +VL GDFL +Q+ + + E ++ LS V AEGE++Q Sbjct: 98 RSVPTVNSLFDNRVAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEIQQGINR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + ++ E YL KTA L + + + + +++ V L +YG NLG+AFQ+VDD+ Sbjct: 158 FDTSISLEAYLEKSYYKTASLIANSAKAAGVLSEQSAEVNHHLYNYGRNLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ +GK G D +G T P + A + E + +G I +KA Sbjct: 218 LDFTSPTEVLGKPSGSDLISGNITAPALFAMKENPYIEVLIEREFSQEGDI-----EKAL 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 + ++ ++ ++ A YGQ A L CL S K+ L+E+VD+ L R+ Sbjct: 273 DFIHSSQGILRSKELANQYGQSALKHLDCLASSPSKEVLIELVDYVLSRI 322 >gi|172037378|ref|YP_001803879.1| solanesyl diphosphate synthase [Cyanothece sp. ATCC 51142] gi|171698832|gb|ACB51813.1| solanesyl diphosphate synthase [Cyanothece sp. ATCC 51142] Length = 327 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 157/290 (54%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRPMLTL--ATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP + L + A ML+ H LA E IHTA+L+HDDVVD++ALR Sbjct: 42 EHLFDAGGKRIRPAIVLLVSRATMLDSDITPRHRRLAEITEMIHTASLVHDDVVDEAALR 101 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 R ++ N+ +VL GDFL +Q+ + + E ++ LS V AEGE+ Q Sbjct: 102 RNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEIFQGINR 161 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +T + YL KTA L + + + +++++ V +L +YG LG+AFQ+VDD+ Sbjct: 162 FDTSLTLDAYLDKSYYKTASLIANSAKSAAILSDSSTEVIDSLYAYGRYLGLAFQIVDDI 221 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ +GK G D +G T P + A + E + K+ I E+++KA Sbjct: 222 LDFTSPTEVLGKPAGSDLISGNITAPALFAME-----ETPYLKTLIEREFSEEEDIEKAL 276 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 I+ E++ + + A + Q A L CL S + +SL ++VD+ L RL Sbjct: 277 SIITESQGIARSRELASYHAQLALKQLDCLKPSQYSQSLTDLVDYVLSRL 326 >gi|300782468|ref|YP_003762759.1| trans-hexaprenyltranstransferase [Amycolatopsis mediterranei U32] gi|299791982|gb|ADJ42357.1| trans-hexaprenyltranstransferase [Amycolatopsis mediterranei U32] Length = 350 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 94/313 (30%), Positives = 159/313 (50%), Gaps = 11/313 (3%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + +V L+ + + SDV+ + D +L+ +GGKR RP+ TL A + D+ ++ A A+ Sbjct: 43 LTEVEKLLREVVRSDVQAVNDAALHLVEAGGKRFRPLFTLLAAQFGPKQDDHVIVAAAAV 102 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H ATL HDDV+D++ +RRG + W N ++L GDFL + A +V + + + Sbjct: 103 ELVHLATLYHDDVMDEATMRRGAESVNARWDNTIAILTGDFLFAHASRLVADLGT----D 158 Query: 132 ALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A ++A T E G++R+ D YL VI KT L + + +++G Sbjct: 159 AARIIAETFGELVTGQMRETVGPGPGDDAVAHYLTVIAQKTGSLIATSGRFGGMMSGAAE 218 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +AL+ +G +G AFQ+ DD++D +E+GK G D R G TLP++ A Sbjct: 219 EHIEALRRFGDIIGTAFQISDDIIDIASPSDELGKAQGTDLREGVRTLPMLYAL---ADP 275 Query: 249 EKNFWKSTINDGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 E + + G I+ + L ++A ++R + L Y Q+A+ L LP S + Sbjct: 276 ETDPRLIELLSGPIADDALVQEALELLRVSSGLDRARVTLSDYAQRARAELTALPASPAR 335 Query: 308 KSLMEVVDFCLQR 320 + V D+ + R Sbjct: 336 DACESVADYLVAR 348 >gi|212638936|ref|YP_002315456.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus WK1] gi|212560416|gb|ACJ33471.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus WK1] Length = 320 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 90/285 (31%), Positives = 151/285 (52%), Gaps = 4/285 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 +L+ +GGKR+RP+ L Y + +A A+E IH A+L+HDDV+D + LRRGK Sbjct: 38 HLLEAGGKRIRPVFVLLGGQFGTYHFEKMKRVAVALELIHMASLVHDDVIDGAMLRRGKE 97 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + WG++ ++ VGD+L ++A + E A L+ + GE+ Q+S D Sbjct: 98 TIQAKWGDRFAMYVGDYLFARALEQMCEIDDPVAHRILANTIVEVCRGEIEQISDKYRFD 157 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 YL IK KTA+L +A+ ++ +++AG ++ + L +G +G++FQ+ DD+LD+ Sbjct: 158 QNLRRYLQRIKRKTALLIAASCQLGAVVAGAPETIHKKLYWFGYYVGMSFQITDDILDFI 217 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 G ++GK G D G TLPV+ A + T +E+ +N+ + E I R Sbjct: 218 GTEKQLGKPAGSDLSQGNVTLPVLYAMKERTVKEQIM---KVNEHTTNREMADVIDGIKR 274 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 N A+ + Y QKA D+L+ LP + +L + + +R Sbjct: 275 TN-AIEKSYELGDRYLQKAIDTLQKLPRNRAWTALYNIAKYIGKR 318 >gi|74100794|gb|AAZ99641.1| isoprenyl diphosphate synthase [Streptomyces lividans TK24] Length = 336 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 157/309 (50%), Gaps = 12/309 (3%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ S+V I + ++L+ +GG+R RP+L + +A + V A +E H AT Sbjct: 31 LLEATKSEVPFITEAAQHLVRAGGERFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++A+RRG +A W N +VL GDFL ++A ++ EA+ +L Sbjct: 91 LYHDDVMDEAAVRRGVPSANTRWDNSVAVLTGDFLFARA-SQILADLGPEAVRVQALAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + + ++++G +V L YG Sbjct: 150 RLVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK---REK----N 251 LG+AFQL DDVLD + +E GK G D R G PTLPV+ +R + E Sbjct: 210 ERLGVAFQLADDVLDIASDSDESGKTPGTDLREGIPTLPVLRLRERAARLGLAEDLALCE 269 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 S ++D E L+ ++R + AL Y ++A+ +L L + K +L+ Sbjct: 270 LLDSDLSDDARHAEALR----LLRAHPALEQARRDTVRYAEEARAALAPLRECDAKAALV 325 Query: 312 EVVDFCLQR 320 E+ D + R Sbjct: 326 ELCDAVVHR 334 >gi|282858641|ref|ZP_06267799.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010] gi|282588559|gb|EFB93706.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010] Length = 326 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 149/296 (50%), Gaps = 1/296 (0%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D ++ V+ ++ GGKR+RP+L L A A +E +HTA+L+HDDVV Sbjct: 29 DDGLLSQVLHHIKQRGGKRMRPILILLIAKNFGQISSVTQHAAVGLELLHTASLIHDDVV 88 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D+S+ RRG+ + + N+ +VLVGD++LS A V T + + L+ + TL++GE+ Sbjct: 89 DESSQRRGQASVNASYNNKVAVLVGDYVLSTALLQVSYTNANLIVRYLAELGQTLSDGEI 148 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 QLS + +TEE YL +I KTA+LF + + AG +++G +LG+ F Sbjct: 149 LQLSNIQREQITEEAYLQIIARKTAILFEICAAIGAESAGASKDDVALARAFGKDLGMIF 208 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 Q+ DD+ DY E+GK G D GK TLP+I A + I+ + Sbjct: 209 QIRDDIFDYFDSEKEIGKPTGNDLTEGKITLPLIYALNTTKNEQMMALARKAKALTITAD 268 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLMEVVDFCLQR 320 + + +EN + E Y KA + + D K+SL +D+ +QR Sbjct: 269 EITELVAFTKENGGVEYAEKCMNDYHAKAMSFINNKVSDPIIKQSLTAYLDYVIQR 324 >gi|307150008|ref|YP_003885392.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822] gi|306980236|gb|ADN12117.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822] Length = 323 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 161/291 (55%), Gaps = 10/291 (3%) Query: 35 KYLIFSGGKRLRPMLTL--ATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP L L + A ML+ H LA E IHTA+L+HDDVVD++ LR Sbjct: 38 EHLFDAGGKRIRPALVLLVSRATMLDQDITPRHRRLAEITEMIHTASLVHDDVVDEAELR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 R ++ N+ +VL GDFL +Q+ + + E ++ LS V AEGE++Q Sbjct: 98 RNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEIQQGINL 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +T E YL KTA L + + + +++++ V V + L +YG LG+AFQ+VDD+ Sbjct: 158 FDTGITLEAYLEKSYYKTASLMANSAKAAAVLSDVPREVTEHLYNYGRYLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE-NLKKA 270 LD+ +GK G D +G T P + A E+N + + + + S E +L+KA Sbjct: 218 LDFTSPTEVLGKPTGSDLASGNITAPALYAM------EENPYLEVLIEREFSEEGDLEKA 271 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +++E+ + + A +Y Q A + L+CL S + L ++VD+ L RL Sbjct: 272 LQLVKESNGIELSRELASNYAQLALEHLKCLQPSPSSQVLADLVDYNLSRL 322 >gi|126656937|ref|ZP_01728115.1| Polyprenyl synthetase [Cyanothece sp. CCY0110] gi|126621775|gb|EAZ92484.1| Polyprenyl synthetase [Cyanothece sp. CCY0110] Length = 323 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 156/290 (53%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRPMLTL--ATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP + L + A ML+ H LA E IHTA+L+HDDVVD++ALR Sbjct: 38 EHLFDAGGKRIRPAIVLLVSRATMLDRELTPRHRRLAEITEMIHTASLVHDDVVDEAALR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 R ++ N+ +VL GDFL +Q+ + + E ++ LS V AEGE+ Q Sbjct: 98 RNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEIFQGINR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +T + YL KTA L + + + +++++ V +L +YG LG+AFQ+VDD+ Sbjct: 158 FDTTLTLDAYLDKSYYKTASLIANSAKSAAILSDSSTEVIDSLYAYGRYLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ +GK G D +G T P + A + E + K+ I E+++KA Sbjct: 218 LDFTSPTEVLGKPAGSDLVSGNITAPALFAIE-----ETPYLKTLIEREFSEEEDIEKAL 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 I+ E++ + A + Q A L CL S + +SL ++VD+ L RL Sbjct: 273 SIINESQGIARARELASYHAQLALKQLDCLKSSQYSQSLTDLVDYVLSRL 322 >gi|14590908|ref|NP_142981.1| geranylgeranyl pyrophosphate synthetase [Pyrococcus horikoshii OT3] gi|90108478|pdb|1WY0|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthetase From Pyrococcus Horikoshii Ot3 gi|3257488|dbj|BAA30171.1| 342aa long hypothetical geranylgeranyl pyrophosphate synthetase [Pyrococcus horikoshii OT3] Length = 342 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 100/324 (30%), Positives = 161/324 (49%), Gaps = 19/324 (5%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 EK+ LI ++ D ++ + ++ +GGKR+RP + L + + + A AIE Sbjct: 20 EKIFELIPEK---DPRVLYEAARHYPLAGGKRVRPFVVLTSTEAVGGDPLRAIYPAVAIE 76 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQ 127 IH +L+HDD++D RRGK +WG ++L GD L S+AF V K Sbjct: 77 LIHNYSLVHDDIMDMDETRRGKPTVHRIWGVNMAILAGDLLFSKAFEAVARAEIPPEKKA 136 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 LE + + L EG+ R L K VT E+Y+ +I KT LF A+ +V +I Sbjct: 137 RVLEVIVKASNELCEGQARDLEFEKKSTVTIEEYMEMISGKTGALFEASAKVGGIIGTDN 196 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +AL S+G N+GIAFQ+ DDVLD + ++GK +G D R GK TL V F+ + Sbjct: 197 EEYIKALSSWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSDIRKGKKTLIVAHFFENADE 256 Query: 248 REKNF-------WKSTINDGKISVENLK----KAFIIMRENRALVDTEYRAYSYGQKAKD 296 ++K + + I E++K +A ++++ ++ A +KA + Sbjct: 257 KDKQRFLKIFGKYAGDVKGRGIIEEDIKSDVMEAIDLLKKYGSIDYAAEIAKDMIKKANE 316 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +LR LP S + L + F ++R Sbjct: 317 ALRILPKSKARMDLELLAKFIVER 340 >gi|226312054|ref|YP_002771948.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis NBRC 100599] gi|226095002|dbj|BAH43444.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis NBRC 100599] Length = 321 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 90/319 (28%), Positives = 160/319 (50%), Gaps = 19/319 (5%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KD++ + + K I + V + +L+ +GGKR+RP+ L Y +A Sbjct: 12 KDVQYIEDELEKAIDTPVRELYLSSTHLLKAGGKRIRPVFVLLGGKWGNYDVKKLKHVAV 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IH A+L+HDDV+DD+ RRGK R+ W N+ ++ GD++ ++A + + + Sbjct: 72 PLELIHMASLVHDDVIDDADKRRGKDTVRMKWDNKVAMYAGDYIFARALAIASQLPIPQL 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + LS + +GE++Q+ N D YL IK KTA+L + + ++ ++ +G Sbjct: 132 HQILSNAIVEVCKGEIQQVKDLNNWDQNFRTYLRRIKRKTALLIAISCQLGAVASGASAD 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR- 248 + + + YG N+G+AFQ+ DD+LD+ G ++GK G D +G TLP + + G R Sbjct: 192 MIRKMYWYGYNVGMAFQITDDILDFTGTEKQLGKPAGSDLVHGNITLPALYSAHHGKARA 251 Query: 249 -------EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + FW T +A ++RE+ + ++ A Y +A L L Sbjct: 252 QFQEWIAKNTFWDHT-----------DEAVRMVREDEGIAFSQRLAERYIARAHAILADL 300 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P++ K SL + ++ + R Sbjct: 301 PNNQAKTSLTGIANYIIDR 319 >gi|152975037|ref|YP_001374554.1| heptaprenyl diphosphate synthase component II [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023789|gb|ABS21559.1| Heptaprenyl diphosphate synthase component II [Bacillus cytotoxicus NVH 391-98] Length = 320 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 92/303 (30%), Positives = 156/303 (51%), Gaps = 10/303 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L EY+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGEYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAALLRRGSATVNANWGDRIAMYTGDYLFAKSLECITNLEVPEAHQALSYTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ +G L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIASGASRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFWKSTI 257 +G+++Q++DD+LD+ ++GK G D G TLP + A + REK +T Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNVTLPALYAMEDSKLREKIVSVHENTTA 262 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 ++ K + +K + I +RA +E Y KA + ++ LP K +L V + Sbjct: 263 SEMKEIIHAIKMSPAI---DRAFAFSE----RYLHKALEVIKPLPRGQAKYALQNVAKYI 315 Query: 318 LQR 320 +R Sbjct: 316 GKR 318 >gi|17227592|ref|NP_484140.1| solanesyl diphosphate synthase [Nostoc sp. PCC 7120] gi|17135074|dbj|BAB77620.1| solanesyl diphosphate synthase [Nostoc sp. PCC 7120] Length = 323 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 165/291 (56%), Gaps = 10/291 (3%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEYRG--DNHVLLACAIEFIHTATLLHDDVVDDSAL 90 ++L +GGKR+RP +L ++ A ML+ +G H LA E IHTA+L+HDDVVD+S + Sbjct: 38 EHLFGAGGKRIRPAIVLLISRATMLD-QGITPRHRRLAEITEMIHTASLVHDDVVDESEV 96 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG ++GN+ ++L GDFL +Q+ + + + ++ LS V LA GE++Q Sbjct: 97 RRGVPTVHSLFGNRIAILAGDFLFAQSSWYLANLDNLQVVKLLSEVIMDLATGEIQQGLN 156 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + ++ E Y+ KTA L + + + + L++ V + L +YG +LGIAFQ+VDD Sbjct: 157 RFDASISIETYIEKSYYKTASLVANSSKAAGLLSEVSPETAEHLYAYGRHLGIAFQIVDD 216 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 +LD+ + +GK +G D ++G T PV+ A EK + + I +L++A Sbjct: 217 ILDFTSTTDTLGKPVGSDLKSGNLTAPVLFALA-----EKPYLEVLIEREFAQEGDLEQA 271 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++++++ + + A + + A + L LP S ++L+++ ++ + RL Sbjct: 272 LELIQDSQGIQQSRELAAHHTKLAIEHLATLPPSESHQALIKIAEYAISRL 322 >gi|145294625|ref|YP_001137446.1| hypothetical protein cgR_0576 [Corynebacterium glutamicum R] gi|140844545|dbj|BAF53544.1| hypothetical protein [Corynebacterium glutamicum R] Length = 350 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 166/318 (52%), Gaps = 16/318 (5%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACA 70 M +V L+ + S + + D+V +L +GGKR RPM L A+ + +N + A Sbjct: 42 MVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGEKPLSENVIKAAVV 101 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E H ATL HDDV+D++++RRG +A W N ++L GD LL+ A ++ SQ Sbjct: 102 VEITHLATLYHDDVMDEASMRRGVPSANARWDNSVAILAGDILLAHASGLM----SQLGT 157 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + ++ A T E G++R+ ++ D E Y +VI+ KT VL ++A + ++ AG Sbjct: 158 DTVAHFAETFGELVTGQMRETVGPRDTDPIEH-YTNVIREKTGVLIASAGYLGAMHAGAA 216 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ALK++G +G+ FQ+VDD++D E +E GK G D R G TLPV+ A + T Sbjct: 217 PEHIDALKNFGAAVGMIFQIVDDIIDIFSETHESGKTPGTDLREGVFTLPVLYALREDTP 276 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMREN---RALVDTEYRAYSYGQKAKDSLRCLPDS 304 + +N E + ++ ++ +A +D YR Y A L LPDS Sbjct: 277 VGAEL-RDILNGPLEDDETVNHVLELLSQSGGRQAALDEVYR---YMDIANAELDRLPDS 332 Query: 305 SWKKSLMEVVDFCLQRLN 322 + K++L + F ++R+ Sbjct: 333 TVKEALRNLATFTVKRVG 350 >gi|302523893|ref|ZP_07276235.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. AA4] gi|302432788|gb|EFL04604.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. AA4] Length = 347 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 154/314 (49%), Gaps = 13/314 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + V ++ + SDV + D +L+ +GGKR RP+ TL +A +G+ ++ A A+ Sbjct: 40 LADVETMLRDVVKSDVPAVHDAALHLVEAGGKRFRPLFTLLSAQFGPKQGEQVLVAAAAV 99 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H ATL HDDV+D++ +RRG + W N ++L GD+L + A +V + + + Sbjct: 100 ELVHLATLYHDDVMDEATMRRGAESVNSRWDNTVAILTGDYLFAHASRLVADLGT----D 155 Query: 132 ALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A ++A T E G++R+ D E YL VI KT L + + +++G Sbjct: 156 AARIIAETFGELVSGQMRETVGPGPGDDPVEHYLTVIAQKTGSLIATSGRFGGMMSGAAE 215 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF-QRGT- 246 QAL+ +G +G AFQ+ DDV+D E+GK G D R G TLP++ A GT Sbjct: 216 EHIQALRRFGDIIGAAFQISDDVIDIASPSVELGKAQGTDLREGVRTLPMLYALADPGTD 275 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 R I D + E L+ ++R + L Y +A+ L LP S Sbjct: 276 PRLVELLAGPITDDALVAEALE----LLRRSSGLERARETLSDYASRARAELASLPASPA 331 Query: 307 KKSLMEVVDFCLQR 320 + + V D+ + R Sbjct: 332 RDACESVADYLVAR 345 >gi|221310190|ref|ZP_03592037.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|221314513|ref|ZP_03596318.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319435|ref|ZP_03600729.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. JH642] gi|221323711|ref|ZP_03605005.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. SMY] gi|321311744|ref|YP_004204031.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis BSn5] gi|291484698|dbj|BAI85773.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. natto BEST195] gi|320018018|gb|ADV93004.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis BSn5] Length = 320 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 158/298 (53%), Gaps = 4/298 (1%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SD ++ + +L+ +GGKR+RP+ L + + +Y + +A +E IH A+L+HD Sbjct: 25 VRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLEMIHMASLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ LRRGK + W N+ ++ GD++L+ + M+ +A LS + Sbjct: 85 DVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ N++ YL IK KTA+L + + ++ ++ +G + +AL +G +G Sbjct: 145 GEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +++Q++DD+LD+ E+GK +G D G TLPV+ A + KN K + + + Sbjct: 205 MSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALKNPAL--KNQLK--LINSET 260 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + E L+ +++ A+ + + Y QKA L LP + SL + + +R Sbjct: 261 TQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFQKLNTLPRGRARSSLAAIAKYIGKR 318 >gi|60682991|ref|YP_213135.1| putative isoprenoid biosynthesis-like protein [Bacteroides fragilis NCTC 9343] gi|60494425|emb|CAH09221.1| putative isoprenoid biosynthesis related protein [Bacteroides fragilis NCTC 9343] Length = 324 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 86/235 (36%), Positives = 133/235 (56%), Gaps = 10/235 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA 89 D +KY++ GGKR+RP+L L + Y+ D + A AIE H TLLHDD++D + Sbjct: 29 DPIKYVLSMGGKRIRPVLMLMAYNL--YKEDVSSIYDPATAIEVYHNYTLLHDDLMDRAD 86 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELR 146 +RRGK VW + T++L GD +L A+ + + S+ E ++ SL A + EG+ Sbjct: 87 MRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLKEVMDLFSLTALEICEGQQM 146 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 ++ DV EE+YL +I+ KTAVL +A+L++ +++ G + L +GM +G+AFQ Sbjct: 147 DMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASPEDAENLYDFGMQIGVAFQ 206 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE---KNFWKSTIN 258 L DD+LD G+ GKNIG D K T +I A +R + + N W S + Sbjct: 207 LQDDLLDVYGDPAVFGKNIGGDILCNKKTYMLIKALERADRDQLEGLNHWLSATS 261 >gi|265766878|ref|ZP_06094707.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263253255|gb|EEZ24731.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 324 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 86/232 (37%), Positives = 132/232 (56%), Gaps = 10/232 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA 89 D +KY++ GGKR+RP+L L + Y+ D + A AIE H TLLHDD++D + Sbjct: 29 DPIKYVLSMGGKRIRPVLMLMAYNL--YKEDVSSIYDPATAIEVYHNYTLLHDDLMDRAD 86 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELR 146 +RRGK VW + T++L GD +L A+ + + S+ E ++ SL A + EG+ Sbjct: 87 MRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLKEVMDLFSLTALEICEGQQM 146 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 ++ DV EE+YL +I+ KTAVL +A+L++ +++ G + L +GM +G+AFQ Sbjct: 147 DMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASPEDAENLYDFGMQIGVAFQ 206 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE---KNFWKS 255 L DD+LD G+ GKNIG D K T +I A +R + + N W S Sbjct: 207 LQDDLLDVYGDPAVFGKNIGGDILCNKKTYMLIKALERADRDQLERLNHWLS 258 >gi|126653362|ref|ZP_01725466.1| HepT [Bacillus sp. B14905] gi|126589878|gb|EAZ84009.1| HepT [Bacillus sp. B14905] Length = 321 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 150/292 (51%), Gaps = 3/292 (1%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I D +L+ +GGKR+RP+ L A EY + +A +E IH A+L+HDDV+DDS Sbjct: 31 LINDASLHLLQAGGKRIRPIFVLLGAKFGEYDIEKMKDVAVPLELIHMASLVHDDVIDDS 90 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 +RRG+ + W N+ ++ GDF+ ++A + + + + L+ + GE+ Q+ Sbjct: 91 NMRRGRPTVKAQWNNRVAMYTGDFIFARALEYITKIEDPLVHQILARTMVEICNGEVIQI 150 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 LD +DY IK KTA+L S++ E+ ++ AGV + LK +G +G++FQ++ Sbjct: 151 EDKFRLDQGLKDYFRRIKRKTALLISSSCELGAVAAGVDAKTVRHLKRFGYFVGMSFQII 210 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DDVLD E+GK G D G TLP++L E + + G ++ + Sbjct: 211 DDVLDIMATDKELGKPAGSDLLQGNITLPILLL---KDDPEMQPFLVKVFAGTLTEAERQ 267 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +R++ A+ + Y +KA + LP KK L +V F +R Sbjct: 268 NMLQYVRKSHAIEQANRMSDKYLKKALQEIDALPKHPVKKKLRDVALFMGKR 319 >gi|302543420|ref|ZP_07295762.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Streptomyces hygroscopicus ATCC 53653] gi|302461038|gb|EFL24131.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Streptomyces himastatinicus ATCC 53653] Length = 335 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 102/326 (31%), Positives = 155/326 (47%), Gaps = 13/326 (3%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + LE T + V +L+ SDV I + ++L+ +GGKR RP+L L A + Sbjct: 14 RTLEADTQAGLTAVEEGLLEATKSDVPFITEAAQHLVRAGGKRFRPLLVLLAAQFGDPYA 73 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 V A +E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A V Sbjct: 74 PGVVPSAVVVELTHLATLYHDDVMDEAEVRRGVSSANARWGNSVAVLTGDFLFARA-SHV 132 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + EA+ + L G++ + + + D E YL V+ KT L + + + Sbjct: 133 LADLGPEAVRVQAEAFERLVTGQILETAGPRGRDPIEH-YLDVLAGKTGSLIAVSGRFGA 191 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI-- 239 +++G S+ L YG LG+AFQL DDVLD + +E GK G D R G TLPV+ Sbjct: 192 MMSGADESIVNILTQYGERLGMAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLHL 251 Query: 240 --LAFQRGTKREKNFWK---STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 A G ++ + + D E L++ +R + AL Y +A Sbjct: 252 RAQAEATGAPEDRELCELLAGDLTDDARHAEVLRR----LRAHPALEQARQDTLRYAAEA 307 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320 + L LP+ K +L + D R Sbjct: 308 RSMLAPLPEGPAKSALEGLCDAVAHR 333 >gi|253566127|ref|ZP_04843581.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251945231|gb|EES85669.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 324 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 86/235 (36%), Positives = 133/235 (56%), Gaps = 10/235 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA 89 D +KY++ GGKR+RP+L L + Y+ D + A AIE H TLLHDD++D + Sbjct: 29 DPIKYVLSMGGKRIRPVLMLMAYNL--YKEDVSSIYDPATAIEVYHNYTLLHDDLMDRAD 86 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELR 146 +RRGK VW + T++L GD +L A+ + + S+ E ++ SL A + EG+ Sbjct: 87 MRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLKEVMDLFSLTALEICEGQQM 146 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 ++ DV EE+YL +I+ KTAVL +A+L++ +++ G + L +GM +G+AFQ Sbjct: 147 DMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASPEDAENLYDFGMQIGVAFQ 206 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE---KNFWKSTIN 258 L DD+LD G+ GKNIG D K T +I A +R + + N W S + Sbjct: 207 LQDDLLDVYGDPAVFGKNIGGDILCNKKTYMLIKALERADRDQLEGLNHWLSATS 261 >gi|300088362|ref|YP_003758884.1| polyprenyl synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528095|gb|ADJ26563.1| Polyprenyl synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 324 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 151/292 (51%), Gaps = 10/292 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D++++ I +GGK LRP LT ++ D + +A A E +H +TL+HDD +D +A R Sbjct: 38 DMLRH-ILTGGKVLRPALTFLAGRCIDESTDRILNMATANELLHISTLVHDDAIDHAATR 96 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG VWG + ++L+GDFL ++A T + ++ S T+A GELRQ Sbjct: 97 RGHQTVNNVWGLEKAILLGDFLFARAGEYAAATDNLRTVKMFSNTLQTIAVGELRQAKDV 156 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + + E Y I KTA L + E +++ QAL +G NLG+AFQ+VDD+ Sbjct: 157 FSPAQSREGYFKRIAGKTASLLKMSTESGAVLGSGTEEQIQALADFGWNLGMAFQIVDDI 216 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTINDGKISVENLKK 269 LD+ G E+GK +G D R G TLP +L +R +F +G ++ + Sbjct: 217 LDFTGTEAELGKPVGSDLRQGTITLPALLLMERHPDDNPVADFLADRDREGAVA----RV 272 Query: 270 AFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +M E L + Y A Y +A + L LP+++ +++L E+ F + R Sbjct: 273 IQAVMDEG--LFEESYAFATEYSDRALERLAVLPETACREALRELTGFLIGR 322 >gi|19551716|ref|NP_599718.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] gi|62389371|ref|YP_224773.1| octaprenyl-diphosphate synthase protein [Corynebacterium glutamicum ATCC 13032] gi|21323238|dbj|BAB97866.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] gi|41324705|emb|CAF19187.1| PUTATIVE OCTAPRENYL-DIPHOSPHATE SYNTHASE PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 350 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 167/318 (52%), Gaps = 16/318 (5%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACA 70 M +V L+ + S + + D+V +L +GGKR RPM L A+ + +N + A Sbjct: 42 MVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGEKPLSENVIKAAVV 101 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E H ATL HDDV+D++++RRG +A W N ++L GD LL+ A ++ SQ Sbjct: 102 VEITHLATLYHDDVMDEASMRRGVPSANARWDNSVAILAGDILLAHASGLM----SQLGT 157 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + ++ A T E G++R+ ++ D E Y +VI+ KT VL ++A + ++ AG Sbjct: 158 DTVAHFAETFGELVTGQMRETVGPRDTDPIEH-YTNVIREKTGVLIASAGYLGAMHAGAA 216 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ALK++G +G+ FQ+VDD++D E +E GK G D R G TLPV+ A + T Sbjct: 217 PEHIDALKNFGAAVGMIFQIVDDIIDIFSETHESGKTPGTDLREGVFTLPVLYALREDTP 276 Query: 248 ---REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 ++ + D + +V ++ + +A +D YR Y A L LPDS Sbjct: 277 VGAELRDILTGPLEDDE-TVNHVLELLSQSGGRQAALDEVYR---YMDIANAELDRLPDS 332 Query: 305 SWKKSLMEVVDFCLQRLN 322 + K++L + F ++R+ Sbjct: 333 TVKEALRNLATFTVKRVG 350 >gi|16079331|ref|NP_390155.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|399776|sp|P31114|HEPS2_BACSU RecName: Full=Heptaprenyl diphosphate synthase component 2; Short=HEPPP synthase subunit 2; AltName: Full=Spore germination protein C3 gi|143803|gb|AAA20856.1| GerC3 [Bacillus subtilis] gi|2634692|emb|CAB14190.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|124494285|gb|ABN13180.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|124494305|gb|ABN13199.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494385|gb|ABN13275.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494445|gb|ABN13332.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. SMY] Length = 348 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 158/298 (53%), Gaps = 4/298 (1%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SD ++ + +L+ +GGKR+RP+ L + + +Y + +A +E IH A+L+HD Sbjct: 53 VRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLEMIHMASLVHD 112 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ LRRGK + W N+ ++ GD++L+ + M+ +A LS + Sbjct: 113 DVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL 172 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ N++ YL IK KTA+L + + ++ ++ +G + +AL +G +G Sbjct: 173 GEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVG 232 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +++Q++DD+LD+ E+GK +G D G TLPV+ A + KN K + + + Sbjct: 233 MSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALKNPAL--KNQLK--LINSET 288 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + E L+ +++ A+ + + Y QKA L LP + SL + + +R Sbjct: 289 TQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFQKLNTLPRGRARSSLAAIAKYIGKR 346 >gi|53715029|ref|YP_101021.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46] gi|52217894|dbj|BAD50487.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46] gi|301164456|emb|CBW24014.1| putative isoprenoid biosynthesis related protein [Bacteroides fragilis 638R] Length = 324 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 86/235 (36%), Positives = 133/235 (56%), Gaps = 10/235 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA 89 D +KY++ GGKR+RP+L L + Y+ D + A AIE H TLLHDD++D + Sbjct: 29 DPIKYVLSMGGKRIRPVLMLMAYNL--YKEDVSSIYDPATAIEVYHNYTLLHDDLMDRAD 86 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELR 146 +RRGK VW + T++L GD +L A+ + + S+ E ++ SL A + EG+ Sbjct: 87 MRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLKEVMDLFSLTALEICEGQQM 146 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 ++ DV EE+YL +I+ KTAVL +A+L++ +++ G + L +GM +G+AFQ Sbjct: 147 DMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASPEDAENLYDFGMQIGVAFQ 206 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE---KNFWKSTIN 258 L DD+LD G+ GKNIG D K T +I A +R + + N W S + Sbjct: 207 LQDDLLDVYGDPAVFGKNIGGDILCNKKTYMLIKALERADRDQLEGLNHWLSATS 261 >gi|288965865|pdb|3LMD|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Corynebacterium Glutamicum Atcc 13032 gi|317455534|pdb|3Q2Q|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Corynebacterium Glutamicum Complexed With Calcium And Isoprenyl Diphosphate Length = 360 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 167/318 (52%), Gaps = 16/318 (5%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACA 70 M +V L+ + S + + D+V +L +GGKR RPM L A+ + +N + A Sbjct: 44 MVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGEKPLSENVIKAAVV 103 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E H ATL HDDV+D++++RRG +A W N ++L GD LL+ A ++ SQ Sbjct: 104 VEITHLATLYHDDVMDEASMRRGVPSANARWDNSVAILAGDILLAHASGLM----SQLGT 159 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + ++ A T E G++R+ ++ D E Y +VI+ KT VL ++A + ++ AG Sbjct: 160 DTVAHFAETFGELVTGQMRETVGPRDTDPIEH-YTNVIREKTGVLIASAGYLGAMHAGAA 218 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ALK++G +G+ FQ+VDD++D E +E GK G D R G TLPV+ A + T Sbjct: 219 PEHIDALKNFGAAVGMIFQIVDDIIDIFSETHESGKTPGTDLREGVFTLPVLYALREDTP 278 Query: 248 ---REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 ++ + D + +V ++ + +A +D YR Y A L LPDS Sbjct: 279 VGAELRDILTGPLEDDE-TVNHVLELLSQSGGRQAALDEVYR---YMDIANAELDRLPDS 334 Query: 305 SWKKSLMEVVDFCLQRLN 322 + K++L + F ++R+ Sbjct: 335 TVKEALRNLATFTVKRVG 352 >gi|229096105|ref|ZP_04227078.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-29] gi|229115061|ref|ZP_04244471.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock1-3] gi|228668201|gb|EEL23633.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock1-3] gi|228687065|gb|EEL40970.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-29] Length = 320 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 92/302 (30%), Positives = 159/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ V + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECVTNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG + L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDMVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPILRKK---ITSVHEN 259 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E K I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 260 TTASE--MKEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGQAKYALQNVAKYIG 316 Query: 319 QR 320 +R Sbjct: 317 KR 318 >gi|229029293|ref|ZP_04185383.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH1271] gi|228732041|gb|EEL82933.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH1271] Length = 320 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 92/302 (30%), Positives = 159/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPILRKK---ITSVHEN 259 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E K I +N A +D + A+S Y KA + ++ LP K +L V + Sbjct: 260 TTADE--MKEIIEAVKNSAAIDKAF-AFSERYLHKALEIIKPLPRGQAKYALQNVAKYIG 316 Query: 319 QR 320 +R Sbjct: 317 KR 318 >gi|182436757|ref|YP_001824476.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777352|ref|ZP_08236617.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus XylebKG-1] gi|178465273|dbj|BAG19793.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657685|gb|EGE42531.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus XylebKG-1] Length = 336 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 150/305 (49%), Gaps = 4/305 (1%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ SDV I + ++L+ +GGKR RP+L + + + V A +E H AT Sbjct: 31 LLEATKSDVPFITEAAQHLVRAGGKRFRPLLVMLASQFGDPDAPGVVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A WGN +VL GDFL ++A ++ EA+ + Sbjct: 91 LYHDDVMDEADVRRGVPSANTRWGNSVAVLTGDFLFARA-SHILADLGPEAVRIQAEAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + + ++++G L YG Sbjct: 150 RLVTGQILETAGPRDGRDPVDHYLDVLSGKTGSLVAVSGRFGAMMSGADERTVDVLTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV--ILAFQRGTKREKNFWKST 256 LGIAFQL DDVLD + +E GK G D R G PTLPV + A + + Sbjct: 210 ERLGIAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRLRAQAAADGKPDDLELVE 269 Query: 257 INDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + DG + + L + +R + AL Y Q A+ +L LP+ K +L E+ D Sbjct: 270 LLDGDLGDDAALDEVLRRLRAHPALEQARQDTVHYAQAARATLAPLPEGYAKSALEELCD 329 Query: 316 FCLQR 320 + R Sbjct: 330 AVVHR 334 >gi|75907691|ref|YP_321987.1| polyprenyl synthetase [Anabaena variabilis ATCC 29413] gi|75701416|gb|ABA21092.1| Polyprenyl synthetase [Anabaena variabilis ATCC 29413] Length = 323 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 93/290 (32%), Positives = 160/290 (55%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP +L ++ A MLE H LA E IHTA+L+HDDVVD+S +R Sbjct: 38 EHLFGAGGKRIRPAIVLLISRATMLEQDITPRHRRLAEITEMIHTASLVHDDVVDESEVR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG ++GN+ ++L GDFL +Q+ + + + ++ LS V LA GE++Q Sbjct: 98 RGVPTVHSLFGNRIAILAGDFLFAQSSWYLANLDNLQVVKLLSEVIMDLATGEIQQGLNR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + ++ E+Y+ KTA L + + + + L++ V + L +YG +LGIAFQ+VDD+ Sbjct: 158 FDASISIENYIEKSYYKTASLIANSSKAAGLLSEVSPETAEHLYAYGRHLGIAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ + +GK G D ++G T PV+ A EK + + I +L++A Sbjct: 218 LDFTSTTDTLGKPAGSDLKSGNLTAPVLFALA-----EKPYLEVLIEREFAQEGDLEQAL 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +++ ++ + A + + A + L LP S ++L+ + ++ L RL Sbjct: 273 ELIQNSQGIQKARDLAAHHTKLAIEHLTTLPTSESHQALINIAEYTLSRL 322 >gi|297624850|ref|YP_003706284.1| polyprenyl synthetase [Truepera radiovictrix DSM 17093] gi|297166030|gb|ADI15741.1| Polyprenyl synthetase [Truepera radiovictrix DSM 17093] Length = 315 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 171/317 (53%), Gaps = 4/317 (1%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL +D+ + + + S VE I + + L+ +GGKRLRP L T +L + + Sbjct: 3 DLIQQDLSDFEARLTEELYSPVEFIGAIGEDLVHAGGKRLRPSLAFLTGRLLGAEREAAM 62 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A+E +H+A+LLHDD++DD++ RRG VAA +GN SV+ GDF+L++ ++ E Sbjct: 63 RVALAVELLHSASLLHDDLIDDASTRRGVVAAFRRYGNVVSVMSGDFMLARVLGILAEAD 122 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + +S A + EGE+ Q ++ + E Y +I+ KTAVL +AA E +L+AG Sbjct: 123 APSFTRLMSETAARICEGEVLQFQMASLETYSLEHYNTIIEGKTAVLLAAATEGVALLAG 182 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 R+AL+++G++ G AFQ+ DD+LD + +GK IG D R GK T V+ + G Sbjct: 183 AAPGARRALRAFGLHYGRAFQMRDDLLDLMSDPETLGKPIGGDLREGKATFAVLTLLEAG 242 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + + + ++ ++++ ++R + A + Q A +L + Sbjct: 243 VEEARTILRRHASEPG----DVERMLELVRAHGAEARAAAQIALEAQAAMRALEPFEEGP 298 Query: 306 WKKSLMEVVDFCLQRLN 322 K++L+ + + L+R+ Sbjct: 299 AKRALVSLAERELERVR 315 >gi|229102217|ref|ZP_04232926.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-28] gi|228681118|gb|EEL35286.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-28] Length = 320 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 92/302 (30%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ V + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECVTNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPILRKK---ITSVHEN 259 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E K I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 260 TTASE--MKEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGQAKYALQNVAKYIG 316 Query: 319 QR 320 +R Sbjct: 317 KR 318 >gi|172057807|ref|YP_001814267.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15] gi|171990328|gb|ACB61250.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15] Length = 320 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 93/316 (29%), Positives = 169/316 (53%), Gaps = 7/316 (2%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D+T K++ V+ +++ I S I + L+ +GGKR+RP L + + D V Sbjct: 9 DVT-KEVSLVDQFLIRHIASSDPTIDAAGQQLLQAGGKRIRPAFVLLASKFGQADRDELV 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A ++E +H A+L+HDDV+DD+ LRRGK + + ++ G+FL +A ++ E Sbjct: 68 RVAASLELVHMASLVHDDVIDDAELRRGKPTVMQHFDEEVALYSGNFLFGEAVKLIGEVG 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 E ++ + + EGE+ Q+ + + + + Y+ I+ KTA+L A+ + +++A Sbjct: 128 KPELVQVMVHAMREICEGEIEQIYDQYDWEQSIKRYIKRIERKTAILIEASCHLGAIVAN 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 +AL+ +G ++G+AFQ+ DD+LD+ + E+GK + ED R+G TLPV A + Sbjct: 188 CSPEDTKALRQFGRDIGLAFQIADDLLDFTAKRTELGKPVAEDLRHGHKTLPVFYASE-- 245 Query: 246 TKREKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 ++ F++ + S E + ++ + AL T+ Y ++A L LP S Sbjct: 246 ---DREFFRELQKIRSMPSHEEVAPLLDRLQRSDALERTQQTVDLYIRRAILRLNHLPKS 302 Query: 305 SWKKSLMEVVDFCLQR 320 S K+SL EV + +R Sbjct: 303 SAKRSLEEVARYVGKR 318 >gi|169827495|ref|YP_001697653.1| heptaprenyl diphosphate synthase component II [Lysinibacillus sphaericus C3-41] gi|168991983|gb|ACA39523.1| Heptaprenyl diphosphate synthase component II [Lysinibacillus sphaericus C3-41] Length = 324 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 150/292 (51%), Gaps = 3/292 (1%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I D +L+ +GGKR+RP+ L A EY + +A +E IH A+L+HDDV+DDS Sbjct: 34 LINDASLHLLQAGGKRIRPIFVLLGAKFGEYDIEKMKDVAVPLELIHMASLVHDDVIDDS 93 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 +RRG+ + W N+ ++ GDF+ ++A + + + + L+ + GE+ Q+ Sbjct: 94 NMRRGRPTVKAQWNNRVAMYTGDFIFARALEYITKLEDPLVHQILARTMVEICNGEVIQI 153 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 LD +DY IK KTA+L S++ E+ ++ AGV + LK +G +G++FQ++ Sbjct: 154 EDKFRLDQGLKDYFRRIKRKTALLISSSCELGAVAAGVDAKTVRHLKRFGYFVGMSFQII 213 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DDVLD E+GK G D G TLP++L E + + G ++ + Sbjct: 214 DDVLDIMATDKELGKPAGSDLLQGNITLPILLL---KDDPEMQPYLVKVFAGTLTEVERQ 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +R++ A+ + Y +KA + LP KK L +V F +R Sbjct: 271 NMLHYVRKSHAIEQANRMSDKYLKKALQEIDALPKHPVKKKLRDVALFMGKR 322 >gi|110739325|dbj|BAF01575.1| polyprenyl diphosphate synthase [Arabidopsis thaliana] Length = 406 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 96/323 (29%), Positives = 173/323 (53%), Gaps = 11/323 (3%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALM--LEY 59 +L D++ +N +L + ++ ++ + + +GGKR+RP L ATA + L+ Sbjct: 89 ELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKE 148 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +QA Sbjct: 149 LTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASW 208 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + ++ E ++ +S V A GE++Q S + D ++YL KTA L +A+ + Sbjct: 209 YLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKG 268 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++ + V+ V + + +G NLG++FQ+VDD+LD+ ++GK G D G T PVI Sbjct: 269 AAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVI 328 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A +R + + I +L++A + + + + A A +L+ Sbjct: 329 FALEREPR-----LREIIESEFCEAGSLEEAIEAVTKGGGIKRAQELAREKADDAIKNLQ 383 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 CLP ++ +L ++V + L+R++ Sbjct: 384 CLPRGGFRSALEDMVLYNLERID 406 >gi|302536189|ref|ZP_07288531.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. C] gi|302445084|gb|EFL16900.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. C] Length = 336 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 156/306 (50%), Gaps = 6/306 (1%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ S+V I + ++L+ +GGKR RP+L + + + V A +E H AT Sbjct: 31 LLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLASRFGDPYAPGIVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A WGN +VL GDFL ++A ++ EA+ + Sbjct: 91 LYHDDVMDEADVRRGVESANTRWGNSVAVLTGDFLFARA-SHILADLGPEAVRIQAEAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ YL VI KT L + + +L++G SV L YG Sbjct: 150 RLVTGQILETAGPRDGRDPVAHYLDVIAGKTGSLIAVSGRFGALMSGADESVVDILTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT--KREKNFWKST 256 LG AFQL DDVLD + +E GK G D R G PTLPV+ + +R ++ Sbjct: 210 ERLGTAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRLREMAERDRRPEDLELVA 269 Query: 257 INDGKISVENLKKAFII--MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 + DG ++ ++ + A ++ +R + AL Y + A+ +L LP+ K +L E+ Sbjct: 270 LLDGDLT-DDARHAEVLARLRVHPALEQARRDTVQYAEDARATLAPLPECFAKSALEELC 328 Query: 315 DFCLQR 320 D + R Sbjct: 329 DAVVHR 334 >gi|302390068|ref|YP_003825889.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646] gi|302200696|gb|ADL08266.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646] Length = 326 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 92/282 (32%), Positives = 146/282 (51%), Gaps = 2/282 (0%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 F+GGKRLRP L L + L + A A E IHTA+L+HDDV+D S RR + Sbjct: 45 FAGGKRLRPKLVLLSGLCFSPVNTKMIYSAVAAELIHTASLIHDDVIDRSDYRRNRPTIN 104 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 V+GN T+VL GD++ ++AF ++ + L + GE+ Q S +L V E Sbjct: 105 YVYGNHTAVLAGDYIFAKAFEVLCRQNLNRCMGYLVEAIQEMCTGEIIQARESPDLTVDE 164 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + Y I+ KTA L +A + + + + +G+ LG AFQ+VDD+LD G+ Sbjct: 165 DRYFRTIEKKTASLIAACCKSGADCGKADEVQIEKMGLFGLYLGYAFQIVDDILDITGDT 224 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278 +EMGK + D GK TLP I F R E ++ T+ + ++ + + ++ + Sbjct: 225 SEMGKPVAHDLEEGKITLPYIY-FLRDRVWEAK-YRYTLMERNLATDMKYQIIRDLKHSG 282 Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A+ +A +KAK+ L LPDS +K+ L ++ + + R Sbjct: 283 AITKAYAKAEECVKKAKEILNELPDSIYKQILADLSEKVMLR 324 >gi|313472484|ref|ZP_07812976.1| polyprenyl synthetase family protein [Lactobacillus jensenii 1153] gi|313449165|gb|EEQ68919.2| polyprenyl synthetase family protein [Lactobacillus jensenii 1153] Length = 319 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 167/314 (53%), Gaps = 2/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L ++ +VN L+ + + + + + +K + +GGK LRP L L A + + Sbjct: 6 LIANELAQVNELLKQTMHAPNKNLESALKEMADNGGKYLRPSLVLLAAHAVGKTNKQIIQ 65 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A AIE +H ATL+HDDV+DDS RRGK + + +G +V GD L + F ++++ Sbjct: 66 IATAIETLHMATLIHDDVIDDSDKRRGKPSIQFAFGKDVAVYAGDLLFTNFFDLMLDVNE 125 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E L + + GEL Q++ NL+ T +DYL IK KTA LF A E + AG Sbjct: 126 PEYLRLNAQTMRQILNGELGQMNQRFNLEQTFDDYLADIKGKTATLFRLAAEEGAHFAGG 185 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 Q L ++ +LGIAFQ++DD+LDYRG +++ K + ED G +LP++L ++ Sbjct: 186 NLEQTQILANFAEDLGIAFQIIDDILDYRGS-SQLNKPMLEDLPTGVYSLPLLLTLKQPD 244 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + ++V+++K+ I+ ++ A+ +++ A +Y QK L L + Sbjct: 245 LKAQ-LLPLLNKRTAMTVKDIKQIQAIVIDSGAITESKQLAQNYAQKGIAELAKLAPNPA 303 Query: 307 KKSLMEVVDFCLQR 320 K L ++ LQR Sbjct: 304 VKILEKMAKELLQR 317 >gi|156937956|ref|YP_001435752.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I] gi|156566940|gb|ABU82345.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I] Length = 327 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 165/314 (52%), Gaps = 13/314 (4%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+ K+I +E P + ++L GGKRLRP L L L + + A A+E Sbjct: 14 LVDKKIMEVLEGSPKELYEAARHLPSKGGKRLRPALVLLVNKALGGEVEGALPAAAAVEL 73 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-----QE 128 +H TL+HDD++D LRRG +++G ++L GD L ++A+ ++++ +E Sbjct: 74 LHNFTLVHDDIMDRDELRRGVPTVHVLYGESMAILAGDLLYAKAYEALLQSPQPPDLVKE 133 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 E L+ A T+AEG+ + K DVTEE+YL +I+ KT LF A+ + +L A + Sbjct: 134 MTEVLTWSAVTVAEGQAMDMEFEKRWDVTEEEYLEMIEKKTGALFGASAALGALTAN-KR 192 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 V+ +K +G+ LG AFQ+ DDVL G+ GK D R GK T+ VI A + + Sbjct: 193 EVKDLMKEFGLILGKAFQIKDDVLSLLGDEKVTGKPKYNDLREGKKTILVIYALRNLPRD 252 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL--PDSSW 306 E KS + + S E L++ +++ + AL A + ++A + L + D Sbjct: 253 EAERVKSVLGR-ETSYEALEEVAELIKRSGALDYAMKLAEEFEKRAYEILETVRFEDEEA 311 Query: 307 KKSLMEVVDFCLQR 320 ++L E+VDF ++R Sbjct: 312 MRALKELVDFAVKR 325 >gi|70605942|ref|YP_254812.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius DSM 639] gi|729570|sp|P39464|GGPS_SULAC RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase gi|506371|dbj|BAA43200.1| geranylgeranyl diphosphate synthase [Sulfolobus acidocaldarius] gi|68566590|gb|AAY79519.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius DSM 639] Length = 330 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 97/316 (30%), Positives = 165/316 (52%), Gaps = 12/316 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 VN +I I DV + + +L SGGKRLRP++ ++ + + + AIE + Sbjct: 15 VNDIIKSYISGDVPKLYEASYHLFTSGGKRLRPLILTISSDLFGGQRERAYYAGAAIEVL 74 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEAL 130 HT TL+HDD++D +RRG + +G ++L GD L ++AF ++ + S+ + Sbjct: 75 HTFTLVHDDIMDQDNIRRGLPTVHVKYGLPLAILAGDLLHAKAFQLLTQALRGLPSETII 134 Query: 131 EALSLVA---CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A + ++EG+ + +D+ E++YL +I KTA LFSA+ + +LIAG Sbjct: 135 KAFDIFTRSIIIISEGQAVDMEFEDRIDIKEQEYLDMISRKTAALFSASSSIGALIAGAN 194 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ + + +G NLGIAFQ+VDD+L + E+GK + D R GK T+ VI + + Sbjct: 195 DNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKPVFSDIREGKKTILVIKTLELCKE 254 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSS- 305 EK + + S E L + I++ + +D Y A Y + A DSL + S Sbjct: 255 DEKKIVLKALGNKSASKEELMSSADIIK--KYSLDYAYNLAEKYYKNAIDSLNQVSSKSD 312 Query: 306 -WKKSLMEVVDFCLQR 320 K+L + +F ++R Sbjct: 313 IPGKALKYLAEFTIRR 328 >gi|257871265|ref|ZP_05650918.1| polyprenyl synthetase [Enterococcus gallinarum EG2] gi|257805429|gb|EEV34251.1| polyprenyl synthetase [Enterococcus gallinarum EG2] Length = 326 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 101/316 (31%), Positives = 157/316 (49%), Gaps = 21/316 (6%) Query: 20 LKRICSDVEM--------IPDVVKYLIFSGGKRLRPMLTLATALM---LEYRGDNHVLLA 68 LK +CS +E I DV+ +SGGK LRP L A + ++ R D +A Sbjct: 15 LKTVCSIIEERVTVRNKEIQDVLVDFTYSGGKMLRPALFFLFADLGEPIDERNDQLTKIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 ++E +H ATL+HDD++DDS LRRG++ + +G +V GD L +Q F ++IE+ + Sbjct: 75 ASLEILHMATLIHDDIIDDSPLRRGRITVQAKYGKDIAVYTGDLLFTQFFELLIESMNGS 134 Query: 129 ALEALSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A + A L GEL Q+ N+D + DYL I KTA LF A + G+ Sbjct: 135 HFLATNAQAMKRLLLGELDQMHTRYNIDESIADYLQSINGKTAELFWLACIEGAHFGGLD 194 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ G N+GIAFQ+ DD+LDY + + K + ED G TLP++ A Sbjct: 195 LENQERAGEIGRNIGIAFQVFDDILDYTADSGTLKKPVLEDLAQGVYTLPLLFA------ 248 Query: 248 REKN---FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 +E+N F +++ E + ++R + A SY +KA + LP++ Sbjct: 249 KEQNPAAFESYLSKKSELTTEEATEVAELVRRYHGVEKATDFAVSYTEKALADIELLPNT 308 Query: 305 SWKKSLMEVVDFCLQR 320 K+ + E+ LQR Sbjct: 309 PSKEKIRELTQLLLQR 324 >gi|212276250|ref|NP_001130771.1| hypothetical protein LOC100191875 [Zea mays] gi|194690074|gb|ACF79121.1| unknown [Zea mays] gi|238009334|gb|ACR35702.1| unknown [Zea mays] Length = 245 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 85/250 (34%), Positives = 144/250 (57%), Gaps = 9/250 (3%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IHTA+L+HDDV+DDS +RRGK ++G + +VL GDF+ +Q+ + ++ E ++ + Sbjct: 2 IHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKLI 61 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 S V A GE++Q S + D+T +DYL KTA L +A+ + +S+ +GV ++ + Sbjct: 62 SQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTKSASIFSGVSTTICEK 121 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK-REKNF 252 + +YG NLG++FQ+VDD+LD+ ++GK D G T PVI A Q + RE Sbjct: 122 MYAYGRNLGLSFQVVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALQSEPELRE--- 178 Query: 253 WKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 I D + S ++L A ++ + + A G A +L+CLP S ++ +L Sbjct: 179 ----IIDSEFSDTDSLATAIELVHRSGGIRRAHELAREKGDLAIQNLQCLPRSDFRSALE 234 Query: 312 EVVDFCLQRL 321 ++V++ L+R+ Sbjct: 235 KMVEYNLERI 244 >gi|302539319|ref|ZP_07291661.1| predicted protein [Streptomyces sp. C] gi|302448214|gb|EFL20030.1| predicted protein [Streptomyces sp. C] Length = 336 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 89/285 (31%), Positives = 145/285 (50%), Gaps = 12/285 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF--IHTATLLHDDVVDDSAL 90 V +Y + GK LRP L +AL + G +L A+ F HT +LLHDD++D AL Sbjct: 36 VHRYALLPTGKLLRPRLLALSALAVG--GSLRAVLPAAVGFEAAHTGSLLHDDIIDQDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEALSLVACTLAE 142 RRG+ A +G Q +++ G+ L F + E + A+E + + Sbjct: 94 RRGRPAVHTEFGPQMAIVAGNALFFTWFTTLAECAAHGIPHQRIVAAMETQAKAGQQICR 153 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G +L+L+ +L+ + YL + ++KTA LF AA V +++ G AL ++G +LG Sbjct: 154 GAALELTLAGDLEAPPDVYLEMARAKTAALFDAACTVGAVLGGGTEHQIAALGAFGDHLG 213 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 AFQ+ DD+L Y G+ GK D RN +PTLPV+LA Q T ++ ++ + G Sbjct: 214 CAFQIRDDLLPYLGDGARAGKPADSDLRNRRPTLPVLLAHQGATPAQRAVLRNCMTPGGD 273 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 E ++ ++R AL E RA + ++A+ +L +P + Sbjct: 274 PWEAFRRLAGVLRATGALQAAEQRADDHAEQARHALGGIPPGEHR 318 >gi|256825934|ref|YP_003149894.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM 20547] gi|256689327|gb|ACV07129.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM 20547] Length = 324 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 98/317 (30%), Positives = 162/317 (51%), Gaps = 17/317 (5%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M++V+ L+ + + D I + YL+ +GGKR RP L L + + + V A A+ Sbjct: 17 MQQVDALLAEVVQHDDPFIAEASAYLMQAGGKRFRPQLALLVSGLGDGPTPEVVKAAAAV 76 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H A+L HDDV+DD+ LRRG +A +GN TSV+VGD L ++ +V E E Sbjct: 77 ELVHLASLYHDDVMDDADLRRGVPSANARYGNATSVVVGDMLFGKSSALVAELGP----E 132 Query: 132 ALSLVACT---LAEGELR-QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A+ L A T L G++R + + +D + L V+ KT L +AA + +G Sbjct: 133 AVRLQADTFVRLCAGQIRDERPVPAGVDPVDH-LLGVLADKTGALIAAAACYGAQFSGCD 191 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + + ++G LG+ FQL DD+LD + E GK G D R GK TLPV+ A + Sbjct: 192 AATVELMGAFGERLGLVFQLADDLLDVASDAEESGKTPGTDLREGKATLPVLFA-----R 246 Query: 248 REKNFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 R + + + + G ++ E+L +A ++R + L + +Y ++ + L L D Sbjct: 247 RSTDAGSARLRELLAGPVAEEDLSEALGMLRAHPGLQEAREFTLAYARQTESMLEPLGDG 306 Query: 305 SWKKSLMEVVDFCLQRL 321 +L ++V R+ Sbjct: 307 EVPDALRQLVHAVADRV 323 >gi|315606906|ref|ZP_07881913.1| octaprenyl-diphosphate synthase [Prevotella buccae ATCC 33574] gi|315251414|gb|EFU31396.1| octaprenyl-diphosphate synthase [Prevotella buccae ATCC 33574] Length = 325 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 90/293 (30%), Positives = 151/293 (51%), Gaps = 2/293 (0%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V++++ GKR+RPML L A + +E +HTA+L+HDDVVD+S Sbjct: 32 LLGQVLEHIRKRAGKRMRPMLILLMAKNFGEVTEVTQRATVGLELLHTASLVHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+ + + N+ +VLVGD++LS A V T Q + L+ + TL+ GE+ QL Sbjct: 92 GERRGQASVNASYNNKVAVLVGDYILSTALLNVSLTGDQAIITYLAQLGRTLSNGEILQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + +N +++EE Y VI+ KTA LF A + ++ G +A + +G NLGI FQ+ Sbjct: 152 TNIRNQEISEEVYYQVIRQKTAALFEACAGMGAMSTGAGREDIEAARKFGQNLGIIFQIR 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+ DY + +GK G D GK TLPVI A E + +G ++ + Sbjct: 212 DDIFDYY-DSEAIGKPTGNDMAEGKLTLPVIHALHTTGDEEMRALAMKVKEGSVTKGEID 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLMEVVDFCLQR 320 + + N + E R + + + + + D + ++L ++F ++R Sbjct: 271 ELVAFAKRNGGIEYAERRMGDFHAECMEFIGSHVTDGAIGEALKAYLNFVIER 323 >gi|288925940|ref|ZP_06419870.1| octaprenyl-diphosphate synthase [Prevotella buccae D17] gi|288337364|gb|EFC75720.1| octaprenyl-diphosphate synthase [Prevotella buccae D17] Length = 325 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 90/293 (30%), Positives = 152/293 (51%), Gaps = 2/293 (0%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V++++ GKR+RPML L A + +E +HTA+L+HDDVVD+S Sbjct: 32 LLGQVLEHIRKRAGKRMRPMLILLMAKNFGEVTEVTQRATVGLELLHTASLVHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+ + + N+ +VLVGD++LS A V T Q + L+ + TL+ GE+ QL Sbjct: 92 GERRGQASVNASYNNKVAVLVGDYILSTALLNVSLTGDQAIITYLAQLGRTLSNGEILQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + +N +++EE Y VI+ KTA LF A + ++ G +A + +G NLGI FQ+ Sbjct: 152 TNIRNQEISEEVYYQVIRQKTAALFEACAGMGAMSTGAGREDIEAARKFGQNLGIIFQIR 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+ DY + +GK G D GK TLPVI A + E + +G ++ + Sbjct: 212 DDIFDYY-DSEAIGKPTGNDMAEGKLTLPVIHALRTTGDEEMRALAMKVKEGSVTKGEID 270 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLMEVVDFCLQR 320 + + N + E R + + + + + D + ++L ++F ++R Sbjct: 271 ELVAFAKRNGGIEYAERRMGDFHAECMEFIGSHVTDGAIGEALKAYLNFVIER 323 >gi|118431580|ref|NP_148152.2| farnesylgeranyl diphosphate synthase [Aeropyrum pernix K1] gi|116062905|dbj|BAA80767.2| farnesylgeranyl diphosphate synthase [Aeropyrum pernix K1] Length = 332 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 108/326 (33%), Positives = 177/326 (54%), Gaps = 26/326 (7%) Query: 14 KVNFLILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALML-----EYRGDNH 64 + + LI I + + PD + +LI +GGKRLRP++TL TA ML E R Sbjct: 12 RYSMLIDHYIMDFMSITPDRLSGASLHLIKAGGKRLRPLITLLTARMLGGLEAEARA--- 68 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + LA +IE HT +L+HDD++D +RRG +V+G+ ++L GD L + AF M+ ++ Sbjct: 69 IPLAASIETAHTFSLIHDDIMDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADS 128 Query: 125 K--------SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 + + A + LS A ++ G+ + + DV DYL++++ KT L AA Sbjct: 129 REWGMSHEQAYRAFKVLSEAAIQISRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAA 188 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + ++ AG + + + + GMN GIAFQ+ DD+L G+ GK + D R GK TL Sbjct: 189 ARIGAVAAGAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTL 248 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 VI A ++ +RE + K S ++LK+A I+ ++ AL E RA Y ++A+D Sbjct: 249 LVIYAVKKAGRRE----IVDLIGPKASEDDLKRAASIIVDSGALDYAESRARFYVERARD 304 Query: 297 SLRCLP--DSSWKKSLMEVVDFCLQR 320 L +P D+ K+ L ++D+ ++R Sbjct: 305 ILSRVPAVDAESKELLNLLLDYIVER 330 >gi|254414461|ref|ZP_05028227.1| solanesyl diphosphate synthase [Microcoleus chthonoplastes PCC 7420] gi|196178691|gb|EDX73689.1| solanesyl diphosphate synthase [Microcoleus chthonoplastes PCC 7420] Length = 323 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 153/290 (52%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP + L A D H LA E IHTA+L+HDDVVD+S++R Sbjct: 38 EHLFGAGGKRVRPAIVLLIARATVLDSDITPRHRRLAEITEMIHTASLVHDDVVDESSVR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 R ++ N+ +VL GDFL Q+ + + E ++ LS V +AEGE++Q Sbjct: 98 RNVPTVNSMFNNRVAVLAGDFLFGQSAWYLANLNNLEVVKLLSQVIKDMAEGEIQQGLTR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 T + YL KTA L + + + + L++GV V + L YG +LG+AFQ+VDD+ Sbjct: 158 FEASTTIDTYLEKTYKKTASLIANSSKSAGLLSGVSAEVAENLYRYGNHLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ +GK G D +G T PV+ A + EK + + I +++ +A Sbjct: 218 LDFTASTEVLGKPAGSDLISGNLTAPVLYAME-----EKPYLEVLIEREFAQPDDINQAL 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++ E+R + + A + + A D+L L S +L+E+ D+ L R+ Sbjct: 273 ALVMESRGIERSRELAAYHARLALDNLTPLKPSPATTALVELTDYVLSRM 322 >gi|6682999|dbj|BAA88983.1| farnesylgeranyl diphosphate synthase [Aeropyrum pernix] Length = 318 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 103/302 (34%), Positives = 168/302 (55%), Gaps = 22/302 (7%) Query: 36 YLIFSGGKRLRPMLTLATALML-----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 +LI +GGKRLRP++TL TA ML E R + LA +IE HT +L+HDD++D + Sbjct: 24 HLIKAGGKRLRPLITLLTARMLGGLEAEARA---IPLAASIETAHTFSLIHDDIMDRDEV 80 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--------SQEALEALSLVACTLAE 142 RRG +V+G+ ++L GD L + AF M+ +++ + A + LS A ++ Sbjct: 81 RRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLSEAAIQISR 140 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+ + + DV DYL++++ KT L AA + ++ AG + + + + GMN G Sbjct: 141 GQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAAGAGSEIEKMMGEVGMNAG 200 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 IAFQ+ DD+L G+ GK + D R GK TL VI A ++ +RE + K Sbjct: 201 IAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAVKKAGRRE----IVDLIGPKA 256 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSSWKKSLMEVVDFCLQR 320 S ++LK+A I+ ++ AL E RA Y ++A+D L +P D+ K+ L ++D+ ++R Sbjct: 257 SEDDLKRAASIIVDSGALDYAESRARFYVERARDILSRVPAVDAESKELLNLLLDYIVER 316 Query: 321 LN 322 + Sbjct: 317 VK 318 >gi|238855305|ref|ZP_04645623.1| polyprenyl synthetase [Lactobacillus jensenii 269-3] gi|260664293|ref|ZP_05865146.1| heptaprenyl diphosphate synthase component II [Lactobacillus jensenii SJ-7A-US] gi|282933031|ref|ZP_06338422.1| polyprenyl synthetase [Lactobacillus jensenii 208-1] gi|238832075|gb|EEQ24394.1| polyprenyl synthetase [Lactobacillus jensenii 269-3] gi|260562179|gb|EEX28148.1| heptaprenyl diphosphate synthase component II [Lactobacillus jensenii SJ-7A-US] gi|281302840|gb|EFA95051.1| polyprenyl synthetase [Lactobacillus jensenii 208-1] Length = 325 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 167/314 (53%), Gaps = 2/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L ++ +VN L+ + + + + + +K + +GGK LRP L L A + + Sbjct: 12 LIANELAQVNELLKQTMHAPNKNLESALKEMADNGGKYLRPSLVLLAAHAVGKTNKQIIQ 71 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A AIE +H ATL+HDDV+DDS RRGK + + +G +V GD L + F ++++ Sbjct: 72 IATAIETLHMATLIHDDVIDDSDKRRGKPSIQFAFGKDVAVYAGDLLFTNFFDLMLDVNE 131 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E L + + GEL Q++ NL+ T +DYL IK KTA LF A E + AG Sbjct: 132 PEYLRLNAQTMRQILNGELGQMNQRFNLEQTFDDYLADIKGKTATLFRLAAEEGAHFAGG 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 Q L ++ +LGIAFQ++DD+LDYRG +++ K + ED G +LP++L ++ Sbjct: 192 NLEQTQILANFAEDLGIAFQIIDDILDYRGS-SQLNKPMLEDLPTGVYSLPLLLTLKQPD 250 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + ++V+++K+ I+ ++ A+ +++ A +Y QK L L + Sbjct: 251 LKAQ-LLPLLNKRTAMTVKDIKQIQAIVIDSGAITESKQLAQNYAQKGIAELAKLAPNPA 309 Query: 307 KKSLMEVVDFCLQR 320 K L ++ LQR Sbjct: 310 VKILEKMAKELLQR 323 >gi|18977474|ref|NP_578831.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638] gi|18893173|gb|AAL81226.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638] Length = 340 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 104/341 (30%), Positives = 166/341 (48%), Gaps = 26/341 (7%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVV----KYLIFSGGKRLRPMLTLATALMLE 58 M ++L K EK F+ K + E P ++ ++ +GGKR+RP + L + Sbjct: 1 MYDELFKKIKEKAKFVDEKLLSLIPEKEPKILYEAARHYPLAGGKRVRPFVVLTATEAVG 60 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + + A AIE IH +L+HDD++D RRG+ VWG ++L GD L S+AF Sbjct: 61 GEWEKAIYPAVAIELIHNYSLVHDDIMDMDETRRGRPTVHKVWGINMAILAGDLLFSKAF 120 Query: 119 -----CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173 + K LE + + L EG+ L K VT E+Y+ +I KT LF Sbjct: 121 EAISRAEIPPEKKARVLETVVKASNELCEGQAMDLEFEKRDTVTIEEYMRMISGKTGALF 180 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 A+ +V ++ AL ++G N+GIAFQ+ DDVLD + ++GK +G D R GK Sbjct: 181 DASAKVGGIVGTDNEEYINALSTWGRNVGIAFQIWDDVLDLIADEEKLGKPVGSDIRKGK 240 Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD------TEYRA 287 TL V F+ +++K + GK + ++K II + +A V +Y + Sbjct: 241 KTLIVAHFFENADEKDKQKFLKVF--GKYA-GDVKGEGIIEEDIKAEVMEAIDLLKKYGS 297 Query: 288 YSYG--------QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 Y +KA ++L+ LP+S +K L + F ++R Sbjct: 298 IDYAANIAREMVKKANEALKVLPESEARKDLELLARFIVER 338 >gi|94270612|ref|ZP_01291782.1| Geranyltranstransferase [delta proteobacterium MLMS-1] gi|93450734|gb|EAT01802.1| Geranyltranstransferase [delta proteobacterium MLMS-1] Length = 340 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 84/236 (35%), Positives = 127/236 (53%), Gaps = 15/236 (6%) Query: 32 DVVKYLIFSGGKRLRPMLT--------------LATALMLEYRGDNHVLLACAIEFIHTA 77 +V+++ +F+GGKR+RP+LT + T + + LA A E++HTA Sbjct: 35 EVLEHALFAGGKRIRPLLTLLAARLTTAANHGGVPTEPPAADQATDQQRLAIAFEYLHTA 94 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +LLHDDV+D +A RRG+ W ++L GDFL ++A + Q LE ++ Sbjct: 95 SLLHDDVIDHAAQRRGRETVNSRWDQGHAILAGDFLHARAMWLAGNYGGQPCLELIASAT 154 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + E Q + D E Y V++ KTA L +AA + + G QAL+ Y Sbjct: 155 EAMVAAEFLQAEAAAARDWRRETYFAVLEGKTAALIAAACQCGVVAGGGDYRQGQALRVY 214 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 G NLG+AFQ++DD+LD+ G+ GK +G D + GK TLP++LA QR T E+ W Sbjct: 215 GANLGLAFQIIDDLLDFLGDPRATGKAVGNDLQEGKMTLPLLLAHQRATP-EQRCW 269 >gi|91774308|ref|YP_567000.1| farnesyltranstransferase [Methanococcoides burtonii DSM 6242] gi|91713323|gb|ABE53250.1| Bifunctional short chain isoprenyl diphosphate synthase [Methanococcoides burtonii DSM 6242] Length = 322 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 166/294 (56%), Gaps = 16/294 (5%) Query: 35 KYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 +YL +GGKRLRP +L L+T + GD ++ A A+E +H TL+HDD++D+ +R Sbjct: 35 RYLPDAGGKRLRPAVLMLSTEAV---GGDPMSVIPAAVALELVHNFTLVHDDIMDNDDVR 91 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCM--VIETKSQEALEALSLVA--CT-LAEGELR 146 RG A + WG++ ++L GD L S+AF + V+E + L+ ++L++ CT + EG+ Sbjct: 92 RGMPAVHVKWGSEGAILAGDTLYSKAFEILSVMEKDPERILKCVALLSRTCTEICEGQWM 151 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + V+EE+YL +++ KT+VL+ AA +V +L+ G + V A+ +G +GI+FQ Sbjct: 152 DIEFENRDTVSEEEYLEMVEKKTSVLYGAAAKVGALLGGASDEVADAMYEFGRLVGISFQ 211 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 + DDV+D + +GK G D GK TL I A G + E F K G +S E Sbjct: 212 IQDDVIDMVTPEDILGKVRGSDLIEGKRTLIAIHALNHGVELEI-FGKG----GSVSPEQ 266 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +A I+ ++ ++ + + ++ K L L DS K+ L+ V D+ + R Sbjct: 267 IDEAVSILEDSGSIKYAQDLSTETLERGKRMLDILGDSEAKEILLAVADYMVTR 320 >gi|260436153|ref|ZP_05790123.1| solanesyl diphosphate synthase [Synechococcus sp. WH 8109] gi|260414027|gb|EEX07323.1| solanesyl diphosphate synthase [Synechococcus sp. WH 8109] Length = 323 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 155/292 (53%), Gaps = 8/292 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L +G+ H LA E IHTA+L+HDDVVD+++ Sbjct: 36 AAEHLFSAGGKRLRPGIVLLLSRALSAQGELSPRHRRLAEITEMIHTASLVHDDVVDEAS 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + + +VL GDFL +QA + + ++ LS V LA+GE++Q Sbjct: 96 TRRGVDTVHSRFDARVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + T E YL KTA L + + + +++G S +L +G LG+AFQ+VD Sbjct: 156 YRFDTAQTFETYLEKSYCKTASLIANSCRAAGVLSGCSPSQLDSLYQFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T P A E I+ +L K Sbjct: 216 DILDFTGSDQQLGKPAASDLASGYLTAPTFYALG-----EHPSLHLLIDRQFSEPGDLDK 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++R ++A+ T A ++ +++++S+ LP+S +++LME+ DF L RL Sbjct: 271 ALEMVRASKAIERTRELAETFARESRESIAWLPESEAQRALMELPDFVLSRL 322 >gi|311772001|pdb|3AQB|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate Synthase In Complex With Magnesium gi|311772003|pdb|3AQB|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate Synthase In Complex With Magnesium gi|311772005|pdb|3AQC|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate Synthase In Complex With Magnesium And Fpp Analogue gi|311772007|pdb|3AQC|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate Synthase In Complex With Magnesium And Fpp Analogue gi|2982681|dbj|BAA25268.1| component B of hexaprenyl diphosphate synthase [Micrococcus luteus] Length = 325 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 84/300 (28%), Positives = 158/300 (52%), Gaps = 1/300 (0%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I SD E I +++ SGGKR+RPM L + + + + D+ + A ++E +H A+L+HD Sbjct: 25 IQSDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDDLIRTAVSLELVHMASLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 D +D+S +RRG + + + T++ G FLL++A + + + + S + Sbjct: 85 DYIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATINNSKFHQIFSKTILEVCF 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE Q++ N V+ YL I KTA+L A+ + +L + + +K +G +G Sbjct: 145 GEFDQMADRFNYPVSFTAYLRRINRKTAILIEASCHLGALSSQLDEQSTYHIKQFGHCIG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +++Q++DD+LDY + +GK +G D RNG T P++ A +++ + ++ + Sbjct: 205 MSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIANLKEQDDDKLEAVVKHLTS 264 Query: 263 SVENLKKAFIIMR-ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 + ++ +I+ + + + E + YG KAK L L DS+ K L E+ + L+R+ Sbjct: 265 TSDDEVYQYIVSQVKQYGIEPAELLSRKYGDKAKYHLSQLQDSNIKDYLEEIHEKMLKRV 324 >gi|288931868|ref|YP_003435928.1| dimethylallyltranstransferase [Ferroglobus placidus DSM 10642] gi|288894116|gb|ADC65653.1| Dimethylallyltranstransferase [Ferroglobus placidus DSM 10642] Length = 318 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 164/298 (55%), Gaps = 13/298 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + ++LI +GGKRLRP+L+L +E + A AIE +H TL+HDD++D+ Sbjct: 27 EKLYKAARHLINAGGKRLRPVLSLIACEAIERDYRKILPAAVAIEVVHNFTLIHDDIMDE 86 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAE 142 LRRG ++G T++L GD L ++AF C V + L+ V + E Sbjct: 87 DELRRGVKTVHTIYGVPTAILAGDTLFAEAFKIMSYCEVESENLVNGMRKLAEVCVEICE 146 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+ + + V+EE+YL +++ KT+VL + + + +++ G + +AL +YG+N G Sbjct: 147 GQQMDIEFEEREFVSEEEYLEMVRKKTSVLIALSSSIPAILFG-EKKYEKALWNYGINAG 205 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 IAFQ+ DD+LD G+ ++GK+ G D GK TL VI AF+ G + E + GK Sbjct: 206 IAFQIKDDILDLLGK-EKIGKDWGSDLVEGKKTLIVIKAFEEGVELE------SFGKGKA 258 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +E +++ + E A+ E +A Y KA++ L+ L ++ +K L + +F ++R Sbjct: 259 EIEVIERDVKKLIECGAIEYAENKALEYLNKAREELKVLKNNEGRKLLEALAEFFVKR 316 >gi|308174066|ref|YP_003920771.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens DSM 7] gi|307606930|emb|CBI43301.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens DSM 7] gi|328912396|gb|AEB63992.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens LL3] Length = 320 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/301 (28%), Positives = 161/301 (53%), Gaps = 10/301 (3%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SD ++ + +L+ +GGKR+RP+ L + + +Y + +A +E IH A+L+HD Sbjct: 25 VRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLEMIHMASLVHD 84 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD+ LRRGK + W N+ ++ GD++L+ + M+ +A LS + Sbjct: 85 DVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRLDEPKAHRILSKTIVEVCL 144 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q+ N++ YL IK KTA+L + + ++ ++ +G + +AL +G +G Sbjct: 145 GEIEQIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK-NFWKSTINDGK 261 +++Q++DD+LD+ E+GK +G D G TLPV+ A ++ R + S + Sbjct: 205 MSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALRQPELRNQLKLINSETTQEQ 264 Query: 262 IS--VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 ++ ++N+K+ I ++ A+ D Y +KA + L LP + SL + + + Sbjct: 265 LAPIIKNIKRTDAI-EKSMAVSD------RYLKKAFEKLNTLPRGRARSSLAAIAKYIGK 317 Query: 320 R 320 R Sbjct: 318 R 318 >gi|313148980|ref|ZP_07811173.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313137747|gb|EFR55107.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 324 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 86/230 (37%), Positives = 129/230 (56%), Gaps = 10/230 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA 89 D VKY++ GGKR+RP+L L + Y+ D + A AIE H TLLHDD++D + Sbjct: 29 DPVKYVLSMGGKRIRPVLMLMAYNL--YKEDVTSVYDPATAIEVYHNYTLLHDDLMDRAD 86 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELR 146 +RRGK VW + T++L GD ++ A+ + S+ E ++ SL A + EG+ Sbjct: 87 MRRGKTTVHKVWNDNTAILSGDAMMVLAYQYMASCSSEYLKEVMDLFSLTALEICEGQQM 146 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + DV EE+YL +I+ KTAVL +A+L++ +++ G + L +GM +G+AFQ Sbjct: 147 DMGFESRDDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASREDAENLYDFGMQIGVAFQ 206 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR---EKNFW 253 L DD+LD G+ GKNIG D K T +I A +R + E N W Sbjct: 207 LQDDLLDVYGDSAVFGKNIGGDILCNKKTYMLIKALERADRNQLDELNRW 256 >gi|268324511|emb|CBH38099.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured archaeon] Length = 343 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 161/304 (52%), Gaps = 12/304 (3%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 CS+ E+I D + Y+ +GGKRLRP+L L +A + + + A AIE +H A+L+HDD Sbjct: 28 CSN-EIIHDALSYIRDTGGKRLRPILCLLSAEAVGGSREKAMTTAIAIELLHNASLVHDD 86 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 ++DD+ +RR + ++G + ++++GDFL + M+ + E + +S +A G Sbjct: 87 IIDDNYVRRKSPSNPAMYGEKKAIVIGDFLFGISCEMLAKCGVPEVVGLVSSAVSDIAMG 146 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 E + SL + TE+ Y+ V KTA F A+ E +++ G + ++YG N+GI Sbjct: 147 EYLEFSLRTLQETTEQSYMEVATLKTASTFMASAEAGAMLGGGSEAEIANFRNYGKNVGI 206 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK-- 261 AFQ+ DD+LD G+ + GK +G D +NG+ T+ VI A + E+ + S I GK Sbjct: 207 AFQIQDDILDICGDPAKTGKPVGLDIKNGERTILVIHALNHSERSEREYI-SEIMTGKRE 265 Query: 262 ---ISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 ++ +++ FI +D + + AK S+ L +S K L + D Sbjct: 266 LDRFDIDRMRELFI----KSGSIDYALQLSNKLVMGAKSSIAGLKESEAKSKLQFITDLT 321 Query: 318 LQRL 321 +R+ Sbjct: 322 AERI 325 >gi|78212668|ref|YP_381447.1| trans-hexaprenyltranstransferase [Synechococcus sp. CC9605] gi|78197127|gb|ABB34892.1| Trans-hexaprenyltranstransferase [Synechococcus sp. CC9605] Length = 323 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 157/292 (53%), Gaps = 8/292 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L +G+ H LA E IHTA+L+HDDVVD+++ Sbjct: 36 AAEHLFSAGGKRLRPGIVLLLSRALSEQGELSPRHRRLAEITEMIHTASLVHDDVVDEAS 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + + +VL GDFL +QA + + ++ LS V LA+GE++Q Sbjct: 96 TRRGVDTVHSRFDARVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + T E YL KTA L + + + +++G + +L +G LG+AFQ+VD Sbjct: 156 YRFDTAQTFETYLEKSYCKTASLIANSCRAAGVLSGCAPTQLDSLYQFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T P A +E + I+ +L K Sbjct: 216 DILDFTGNDQQLGKPAASDLASGYLTAPTFYAL-----KEHPSLQPLIDRQFSEPGDLDK 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++R ++A+ T A ++ +++++S+ LP+S+ +++LME+ F L RL Sbjct: 271 ALEMVRASKAIERTRKLAETFARESRESIAWLPESAAQRALMELPKFVLSRL 322 >gi|74100798|gb|AAZ99643.1| isoprenyl diphosphate synthase [Streptomyces maritimus] Length = 336 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 157/309 (50%), Gaps = 12/309 (3%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ S+V I + ++L+ +GGKR RP+L + +A + V A +E H AT Sbjct: 31 LLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++A+RRG +A W N +VL GDFL ++A ++ EA+ +L Sbjct: 91 LYHDDVMDEAAVRRGVPSANTRWDNSVAVLTGDFLFARA-SQILADLGPEAVRVQALAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + + ++++G +V + L YG Sbjct: 150 RLVTGQILETAGPQDGRDPVDHYLDVLSGKTGSLVAVSSRFGAMMSGADETVVEVLTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK---REK----N 251 LG+AFQL DDVLD + +E GK G D R G PTLPV+ +R + E Sbjct: 210 ERLGVAFQLADDVLDIASDSDESGKTPGTDLREGIPTLPVLRLRERAARLGLAEDLALCE 269 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 S ++D E L+ ++R + AL Y ++A+ +L L + K +L+ Sbjct: 270 LLDSDLSDDARHAEALR----LLRAHPALEQARRDTVRYAEEARAALAPLRECDAKAALV 325 Query: 312 EVVDFCLQR 320 E+ + R Sbjct: 326 ELCVTVVHR 334 >gi|222152303|ref|YP_002561478.1| polyprenyl synthetase [Streptococcus uberis 0140J] gi|222113114|emb|CAR40511.1| polyprenyl synthetase [Streptococcus uberis 0140J] Length = 326 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 11/317 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNHVL 66 K+++ V LI R+ I + L +GGK LRP + Y R + Sbjct: 13 KEIKAVTQLIENRVQVRNTEIEKAIIQLSQAGGKYLRPAFFFLFSSFGPYQKERKEQLQK 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A ++E +H ATL+HDDV+DDS LRRG + +G +V GDFL + F +++E+ S Sbjct: 73 IAASLEILHMATLVHDDVIDDSPLRRGNPTIQTQYGKDVAVYTGDFLFTVFFELILESMS 132 Query: 127 QEALEALSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 A++ + + GEL Q+ L N + DYL I KTA LF A + + +G Sbjct: 133 NTPYMAINAKSMKKILVGELDQMHLYFNQKQSIRDYLRAISGKTAELFKLASQEGAYFSG 192 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 +V + G ++G+ FQ++DD+LDY + K + ED NG +LP++ A Sbjct: 193 ADETVVRLAGRIGYHIGMTFQILDDILDYTADQKAFNKPVLEDISNGVYSLPLLFAL--- 249 Query: 246 TKREKNFWKSTINDGK--ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RE F + D K IS + LK+ ++ N+ + + A Y QKA D + LP Sbjct: 250 --RENPFALKPLLDKKESISSQELKEVANLVIANKGVDQAKDLARKYTQKAIDDIEKLPK 307 Query: 304 SSWKKSLMEVVDFCLQR 320 S KK L+++ + L+R Sbjct: 308 SKAKKQLLQLTNHLLKR 324 >gi|94264378|ref|ZP_01288169.1| Geranyltranstransferase [delta proteobacterium MLMS-1] gi|93455207|gb|EAT05423.1| Geranyltranstransferase [delta proteobacterium MLMS-1] Length = 340 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 84/236 (35%), Positives = 127/236 (53%), Gaps = 15/236 (6%) Query: 32 DVVKYLIFSGGKRLRPMLT--------------LATALMLEYRGDNHVLLACAIEFIHTA 77 +V+++ +F+GGKR+RP+LT + T + + LA A E++HTA Sbjct: 35 EVLEHALFAGGKRIRPLLTLLAARLTTAANHGGVPTEPPAADQATDRQRLAIAFEYLHTA 94 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +LLHDDV+D +A RRG+ W ++L GDFL ++A + Q LE ++ Sbjct: 95 SLLHDDVIDHAAQRRGRETVNSRWDQGHAILAGDFLHARAMWLAGNYGGQPCLELIASAT 154 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + E Q + D E Y V++ KTA L +AA + + G QAL+ Y Sbjct: 155 EAMVAAEFLQAEAAAARDWRRETYFAVLEGKTAALIAAACQCGVVAGGGDYRQGQALRVY 214 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 G NLG+AFQ++DD+LD+ G+ GK +G D + GK TLP++LA QR T E+ W Sbjct: 215 GANLGLAFQIIDDLLDFLGDPRATGKAVGNDLQEGKMTLPLLLAHQRATP-EQRCW 269 >gi|218680010|ref|ZP_03527907.1| putative octaprenyl-diphosphate synthase [Rhizobium etli CIAT 894] Length = 124 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 67/124 (54%), Positives = 92/124 (74%) Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 MNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVILA++RGT+ E+ FW+ I Sbjct: 1 MNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVILAYRRGTEDERAFWRDAIE 60 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 G + NL+KA ++ + L DT RA YG A+D+L LPD++WK +LMEV+DFC+ Sbjct: 61 AGNSTDANLEKALGLITKYGTLSDTIGRAVHYGTIARDALAPLPDTAWKSALMEVIDFCI 120 Query: 319 QRLN 322 +R+N Sbjct: 121 ERVN 124 >gi|30019662|ref|NP_831293.1| farnesyltransferase [Bacillus cereus ATCC 14579] gi|29895206|gb|AAP08494.1| Farnesyltransferase [Bacillus cereus ATCC 14579] Length = 323 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 90/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 26 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 85 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 86 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 145 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 146 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 205 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 206 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRQK---ITSVHEN 262 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 263 STASE--MQEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGKAKYALQNVAKYIG 319 Query: 319 QR 320 +R Sbjct: 320 KR 321 >gi|239929586|ref|ZP_04686539.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC 14672] gi|291437911|ref|ZP_06577301.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC 14672] gi|291340806|gb|EFE67762.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC 14672] Length = 336 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 12/309 (3%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ S+V I + ++L+ +GGKR RP+L + +A + V A +E H AT Sbjct: 31 LLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYAPGVVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A W N +VL GDFL S+A ++ EA+ + Sbjct: 91 LYHDDVMDEAEVRRGVASANARWDNSVAVLTGDFLFSRA-SHILADLGPEAVRVQAEAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + + ++++G +V L YG Sbjct: 150 RLVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGAMMSGTDETVVDVLTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK---REK----N 251 LG+AFQL DDVLD + +E GK G D R G TLPV+ +R + E Sbjct: 210 ERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRLRERAARLGLAEDVALCE 269 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 S + D E L+ ++R + AL Y ++A+ +L LP+ K +L+ Sbjct: 270 LLDSDLTDDARHAEALR----LLRAHPALEQARRDTVRYAEEARAALAPLPECDAKAALV 325 Query: 312 EVVDFCLQR 320 E+ D + R Sbjct: 326 ELCDAVVHR 334 >gi|297201657|ref|ZP_06919054.1| heptaprenyl diphosphate synthase component II [Streptomyces sviceus ATCC 29083] gi|197710971|gb|EDY55005.1| heptaprenyl diphosphate synthase component II [Streptomyces sviceus ATCC 29083] Length = 336 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 4/312 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M V +L+ S+V I + ++L+ +GGKR RP+L + A + V A + Sbjct: 24 MTAVEEGLLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLAAQFGDPYAPGVVPSAVVV 83 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D++ +RRG +A WGN +VL GDFL ++A ++ EA+ Sbjct: 84 ELTHLATLYHDDVMDEAEVRRGVDSANTRWGNSVAVLTGDFLFARA-SHILADLGPEAVR 142 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 S L G++ + + ++ E YL V+ KT L + + ++++G V Sbjct: 143 VQSEAFERLVTGQILETAGPQDGRDPVEHYLDVLGGKTGSLVAVSCRFGAMMSGADERVV 202 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK---R 248 L YG LG+AFQL DDVLD + +E GK G D R G PT+PV+ +R + Sbjct: 203 DVLTQYGERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIPTMPVLRLRERAARLGLA 262 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 E ++ + +A +R + AL Y + A+ +L L + + Sbjct: 263 EDVALCELLDSDLTDDDRHAEALAALRTHPALEQARRDTVRYAEDARAALAPLRECDARA 322 Query: 309 SLMEVVDFCLQR 320 +LME+ D + R Sbjct: 323 ALMELCDAVVHR 334 >gi|218896543|ref|YP_002444954.1| heptaprenyl diphosphate synthase component II [Bacillus cereus G9842] gi|228964588|ref|ZP_04125697.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|218541188|gb|ACK93582.1| heptaprenyl diphosphate synthase component II [Bacillus cereus G9842] gi|228795122|gb|EEM42619.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar sotto str. T04001] Length = 320 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRQK---ITSVHEN 259 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 260 STASE--MQEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGQAKYALQNVAKYIG 316 Query: 319 QR 320 +R Sbjct: 317 KR 318 >gi|315501200|ref|YP_004080087.1| polyprenyl synthetase [Micromonospora sp. L5] gi|315407819|gb|ADU05936.1| Polyprenyl synthetase [Micromonospora sp. L5] Length = 346 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 156/316 (49%), Gaps = 10/316 (3%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +++V + + S ++ + ++L+ +GGKR RP+L A + D V A + Sbjct: 36 LDRVETSLRASVASADPLVTEASRHLVEAGGKRFRPLLVALGAQFGDPDTDQVVPAAVVM 95 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D++A+RRG +A W N ++LVGD+L ++A + + E Sbjct: 96 ELTHLATLYHDDVMDEAAVRRGAPSANSRWTNSVAILVGDYLFARAADIAADLGP----E 151 Query: 132 ALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A+ L A T A G++ + ++ D YLHVI KT L + + + G Sbjct: 152 AVRLQARTFARLVHGQIAETVGPRDTDPVAH-YLHVIAEKTGSLIATSARFGGMFGGAAP 210 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +AL YG +G+AFQL DD+LD E + GK G D R G PTLPV+ A Sbjct: 211 EHVEALAEYGEIIGVAFQLSDDLLDIASESVQSGKTPGTDLREGVPTLPVLYAMASDDAD 270 Query: 249 EKNF-WKSTINDGKISVENLK-KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + + G + + L +A ++RE+ AL SY + A+ L LP+ Sbjct: 271 AASVRLREILATGPLVDDALHAEALGLLRESPALKRARETVRSYAEDARARLAPLPEGPA 330 Query: 307 KKSLMEVVDFCLQRLN 322 +++L + D+ R + Sbjct: 331 RRALESLCDYIADRTS 346 >gi|217959091|ref|YP_002337639.1| heptaprenyl diphosphate synthase component II [Bacillus cereus AH187] gi|217065071|gb|ACJ79321.1| heptaprenyl diphosphate synthase component II [Bacillus cereus AH187] Length = 320 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 12/304 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSYTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT--KREKNFWKSTIN 258 +G+++Q++DD+LD+ ++GK G D G TLP + A + K+ ++ ++T Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPILCKKIRSVHENTTA 262 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDF 316 D K I +N A +D + A+S Y KA + ++ LP K +L V + Sbjct: 263 DE-------MKEIIEAVKNSAAIDKAF-AFSERYLHKALEMIKPLPRGQAKYALQNVAKY 314 Query: 317 CLQR 320 +R Sbjct: 315 IGKR 318 >gi|162451281|ref|YP_001613648.1| trans-octaprenyltranstransferase [Sorangium cellulosum 'So ce 56'] gi|161161863|emb|CAN93168.1| Trans-octaprenyltranstransferase [Sorangium cellulosum 'So ce 56'] Length = 336 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/282 (34%), Positives = 142/282 (50%), Gaps = 1/282 (0%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++L+ GKRLRP+ + + D A A+E +H ATLLHDDVVD RRG Sbjct: 47 ARHLLGLNGKRLRPICVALASHIGSGFNDAARTFAVAVELVHNATLLHDDVVDLGDRRRG 106 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 AAR+++GN S+ GD+LL A + + LE + LV + E QL+ Sbjct: 107 ADAARVIYGNAASIFGGDYLLLDALSKIQAVGMTDVLERVLLVIKEMVVAEALQLASRGR 166 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 + + +Y ++ KTA LF A+ + GV + +AL+S+G +LG+AFQLVDDVLD Sbjct: 167 VRTSTSEYFQIVDGKTASLFRWAMFAGARAGGVNEPLCKALESFGTSLGVAFQLVDDVLD 226 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-DGKISVENLKKAFI 272 + G+ GK + D R GK T P++LA +R + + D + E ++ Sbjct: 227 FAGDPEATGKALLTDLREGKMTYPLLLAMERDRELTPALEAHCASEDTAVEPELGRRIAQ 286 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 IM E R + D A A S+ LP+S K +L V Sbjct: 287 IMVEKRVVDDCLELASRLCGDAVRSIEPLPESPAKAALEGVA 328 >gi|218233341|ref|YP_002366295.1| heptaprenyl diphosphate synthase component II [Bacillus cereus B4264] gi|228957889|ref|ZP_04119629.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229178021|ref|ZP_04305393.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus 172560W] gi|229189695|ref|ZP_04316709.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC 10876] gi|296502183|ref|YP_003663883.1| farnesyltransferase [Bacillus thuringiensis BMB171] gi|218161298|gb|ACK61290.1| heptaprenyl diphosphate synthase component II [Bacillus cereus B4264] gi|228593744|gb|EEK51549.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC 10876] gi|228605509|gb|EEK62958.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus 172560W] gi|228801805|gb|EEM48682.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|296323235|gb|ADH06163.1| farnesyltransferase [Bacillus thuringiensis BMB171] Length = 320 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRQK---ITSVHEN 259 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 260 STASE--MQEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGKAKYALQNVAKYIG 316 Query: 319 QR 320 +R Sbjct: 317 KR 318 >gi|260910759|ref|ZP_05917413.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 472 str. F0295] gi|260635120|gb|EEX53156.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 472 str. F0295] Length = 325 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 93/286 (32%), Positives = 147/286 (51%), Gaps = 8/286 (2%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GGKR+RP+L L LM + G + A +E +HTA+L+HDDVVD+S RRG+ + Sbjct: 44 GGKRMRPILIL---LMTKSFGKVTPVAQYAAVGLELLHTASLVHDDVVDESGERRGQASV 100 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 + N+ +VLVGD++LS A + T + + L+ + TL+ GE+ QL+ N + + Sbjct: 101 NASYNNKVAVLVGDYILSTALLNIARTDDCDIVCDLAELGRTLSNGEILQLTNIVNTNFS 160 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 EE Y VI+ KTA LF + + + G +A +++G N+GI FQ+ DD+ DY + Sbjct: 161 EEVYFEVIRQKTAALFESCAVIGAKAGGADKQAVEAARAFGRNVGIIFQIRDDIFDYY-Q 219 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 ++GK G D GK TLPV+ A + + +S E + + + N Sbjct: 220 SADLGKPTGNDMAEGKLTLPVLYALNTTGDTQMAALARKVKARNVSAEEIAQLVEFTKNN 279 Query: 278 RALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQRLN 322 + E + A D + R + D+ K +L VDF + R N Sbjct: 280 GGIAYAERKMAECQALAMDFIDRYVADTQLKNALKAYVDFIIDRKN 325 >gi|228978217|ref|ZP_04138594.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis Bt407] gi|228781234|gb|EEM29435.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis Bt407] gi|326939231|gb|AEA15127.1| farnesyltransferase [Bacillus thuringiensis serovar chinensis CT-43] Length = 320 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRQK---ITSVHEN 259 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 260 TTASE--MQEIIDAVKNSPAIDQAF-AFSERYLHKALEIIKPLPRGKAKYALQNVAKYIG 316 Query: 319 QR 320 +R Sbjct: 317 KR 318 >gi|239827501|ref|YP_002950125.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. WCH70] gi|239807794|gb|ACS24859.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. WCH70] Length = 320 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 87/310 (28%), Positives = 159/310 (51%), Gaps = 4/310 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ V + K + SD + + +L+ +GGKR+RP+ L A Y + +A A Sbjct: 13 DLRAVEKELEKTVQSDYSQLSEAALHLLQAGGKRIRPVFVLLAAKFGTYDIERIKHVAVA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD++ +++ + ++ A Sbjct: 73 LELIHMASLVHDDVIDDAELRRGRKTIKAKWNNRFAMYTGDYMFARSLEQMARLENPLAH 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ + GE+ Q+ D YL IK KTA+L +A+ ++ ++ A V Sbjct: 133 RILANTIVEVCRGEIEQIKDKYRFDQNLRCYLRRIKRKTALLIAASCQLGAIAANAAKDV 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L +G +G++FQ+ DD+LD+ G ++GK G D G TLP + A + RE Sbjct: 193 AERLYLFGYYVGMSFQITDDILDFTGTEAKLGKPAGSDLLQGNVTLPALFAMEDKHARE- 251 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + T K + +K+ ++++ A+ + + Y QKA L LP++ + +L Sbjct: 252 ---RITAVHPKTTPNEMKEIITLIKQTGAIEKSYALSDRYLQKAFRVLETLPNNKARSTL 308 Query: 311 MEVVDFCLQR 320 ++ + +R Sbjct: 309 YDIAKYIGKR 318 >gi|226356826|ref|YP_002786566.1| octaprenyl-diphosphate synthase [Deinococcus deserti VCD115] Length = 318 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/222 (38%), Positives = 126/222 (56%), Gaps = 6/222 (2%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATL 79 S VE I + L+ +GGKR RPM+TL A L + + L +E +H+A+L Sbjct: 18 SRVEFIELIGDDLVAAGGKRTRPMITLLAAQALGVGPGSSQWPEVIDLGVCVELLHSASL 77 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVAC 138 LHDD++DD+ RRG+ AA +GN SV+ GDF+L++ ++ S AL A A Sbjct: 78 LHDDLIDDADTRRGQQAAFRRFGNVVSVMSGDFMLARLLTLLAGMPSGTALTRAFGETAS 137 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + EGE+ Q ++ D E YL++I KTA L A +++ G + R+AL ++G Sbjct: 138 QICEGEVLQFQVAAYADYGLEHYLNIIHGKTAALTELAACAPAMLLGSSEAQREALATFG 197 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 G+AFQ+ DD+LD GE N +GK +G D R GK TLP +L Sbjct: 198 REYGLAFQMQDDLLDLAGEENVIGKPVGGDLREGKATLPTLL 239 >gi|156742295|ref|YP_001432424.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] gi|156233623|gb|ABU58406.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] Length = 349 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/323 (30%), Positives = 152/323 (47%), Gaps = 25/323 (7%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L DM V +L R S ++ Y + +GGKRLR L L A + Y + A Sbjct: 39 LNDMADVERQMLARTISRAPLLTAAGTYTVAAGGKRLRAALVLLCARLGMYDPSRALHPA 98 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 AIE +H A+L+HDD+VD + RRG V W ++L+GD+ + A + Sbjct: 99 IAIELLHAASLIHDDLVDHAGQRRGHVTVHSRWDADVALLLGDYFFALAANELAAEPDPR 158 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + A T+ EGEL ++ + L + E Y I KTAVLF AA + +AG + Sbjct: 159 IIAFYTSAAQTMVEGELNPVTQIEPLAIAVEQYYRKIGCKTAVLFEAACKAGIAVAGGDD 218 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL-----------P 237 + + L +G +LG+AFQ+VDDVLDY G+ +GK G D R G TL P Sbjct: 219 AQIETLGRFGYDLGLAFQIVDDVLDYTGDETALGKPAGNDLREGTLTLPLMYAVAQSRHP 278 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 ++LA G + E + I+ +A M E R L+ ++A Sbjct: 279 LLLAIANGQRPEPARVPQIVA-AVIASGGADRA---MEEARRLI----------ERANQQ 324 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L + +++L+E+ +F L R Sbjct: 325 LTLFAPTPARRALIEIGEFVLNR 347 >gi|319892460|ref|YP_004149335.1| Heptaprenyl diphosphate synthase component II [Staphylococcus pseudintermedius HKU10-03] gi|317162156|gb|ADV05699.1| Heptaprenyl diphosphate synthase component II [Staphylococcus pseudintermedius HKU10-03] gi|323464437|gb|ADX76590.1| heptaprenyl diphosphate synthase component II [Staphylococcus pseudintermedius ED99] Length = 318 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 91/314 (28%), Positives = 164/314 (52%), Gaps = 4/314 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LA 68 ++++K+ + + I S+ + +L+ SGGKR+RP+ + ++ + E ++ +A Sbjct: 8 QEIKKIENTLKQLIQSEDSTLQSAADHLLSSGGKRVRPLFVILSSYVGENPANDAAYRVA 67 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL++A + + Sbjct: 68 TALELIHMATLVHDDVIDFSDKRRGKLTIEKKWDQPTAILTGNFLLARALEHLSYIQDSR 127 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + LS + GEL Q + + +YL I KTA+L A EV ++ + + Sbjct: 128 IHQTLSHAIIEVCRGELFQFQDQFRAEQSITNYLRRINRKTALLMQLATEVGAMSSHTDD 187 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + ++ G ++G++FQ+VDDVLD+ ++GK +G D RNG TLPV+LA ++ + Sbjct: 188 PTIRKMRDIGHHIGMSFQIVDDVLDFTSTEKKLGKPVGSDLRNGHMTLPVLLAMKQNPQL 247 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 ++ +T+ G E+ +R++ A+ + + Y KA L LP + K Sbjct: 248 KEKV--ATLTPGS-PTEDFDWCIEQIRQSEAISQSLNVSQKYLDKASTLLETLPKNEIKP 304 Query: 309 SLMEVVDFCLQRLN 322 +++ R+N Sbjct: 305 HFRKLIKRLQSRMN 318 >gi|317121083|ref|YP_004101086.1| polyprenyl synthetase [Thermaerobacter marianensis DSM 12885] gi|315591063|gb|ADU50359.1| Polyprenyl synthetase [Thermaerobacter marianensis DSM 12885] Length = 331 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 121/234 (51%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ V I + + I ++ YL GGKRLRP L L TA Y + + +A A Sbjct: 23 DLAGVEVAIRRALDGPDPHIVELATYLQRGGGKRLRPALLLLTARNFHYDRERLLPVAAA 82 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ATL+HDD+VD + RRG + WG T+VL GDFL ++AF ++ + Sbjct: 83 VELIHMATLVHDDIVDGATSRRGLPTVNVRWGTGTAVLTGDFLFARAFSLLAADGDNRVV 142 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ ++ GE+ Q + + EE Y I KTA S + L+ G Sbjct: 143 RVMAEAVYEMSTGEIEQQAQLFDPAAGEEGYYRRIYKKTAHFISHCCLMGGLMGGAPERQ 202 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +AL+ YG +G+ FQ++DD+LD G ++GK G D R+G TLPV+ A + Sbjct: 203 VEALRRYGYGIGMGFQVIDDILDLTGNPEQLGKPRGTDLRSGVLTLPVLFALAK 256 >gi|315271298|gb|ACO46812.2| putative octaprenyl-diphosphate synthase [Deinococcus deserti VCD115] Length = 324 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/222 (38%), Positives = 126/222 (56%), Gaps = 6/222 (2%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATL 79 S VE I + L+ +GGKR RPM+TL A L + + L +E +H+A+L Sbjct: 24 SRVEFIELIGDDLVAAGGKRTRPMITLLAAQALGVGPGSSQWPEVIDLGVCVELLHSASL 83 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVAC 138 LHDD++DD+ RRG+ AA +GN SV+ GDF+L++ ++ S AL A A Sbjct: 84 LHDDLIDDADTRRGQQAAFRRFGNVVSVMSGDFMLARLLTLLAGMPSGTALTRAFGETAS 143 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + EGE+ Q ++ D E YL++I KTA L A +++ G + R+AL ++G Sbjct: 144 QICEGEVLQFQVAAYADYGLEHYLNIIHGKTAALTELAACAPAMLLGSSEAQREALATFG 203 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 G+AFQ+ DD+LD GE N +GK +G D R GK TLP +L Sbjct: 204 REYGLAFQMQDDLLDLAGEENVIGKPVGGDLREGKATLPTLL 245 >gi|170077205|ref|YP_001733843.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7002] gi|169884874|gb|ACA98587.1| Solanesyl diphosphate synthase [Synechococcus sp. PCC 7002] Length = 323 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 97/314 (30%), Positives = 165/314 (52%), Gaps = 8/314 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRG--DNHVLL 67 D+++++ + + I + ++ ++L +GGKR+RP + L A+ L R H L Sbjct: 14 DLKELSENLTRLISARHPILGAAAEHLFSAGGKRVRPAIVLLASRATLGDRPLTQRHRRL 73 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A E IHTA+L+HDDVVD++ALRR ++ N+ +VL GDFL +Q+ + + Sbjct: 74 AEITEMIHTASLVHDDVVDEAALRRSVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNL 133 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ LS V AEGE++Q + + E Y+ KTA L + + +++++ V Sbjct: 134 TVVKLLSEVIKDFAEGEIQQGLNRFDTGMNLEIYIEKSYYKTASLIGNSAKAAAVLSEVD 193 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + L YG NLG+AFQ+VDD+LD+ G + +GK G D G T P + A + Sbjct: 194 PEIGDRLYDYGRNLGLAFQIVDDILDFTGSTDVLGKPAGSDLIGGHITAPALFAMEEHPN 253 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + +G + +KA I+R + + + A +GQ A+ SL CL S K Sbjct: 254 LTQLIEREFAENG-----DPEKALEIVRNSNGISRAKELAAHHGQLARHSLECLDPSPSK 308 Query: 308 KSLMEVVDFCLQRL 321 +L +++D+ L R+ Sbjct: 309 DALTDLIDYVLGRM 322 >gi|229172251|ref|ZP_04299815.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus MM3] gi|228611239|gb|EEK68497.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus MM3] Length = 320 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 91/302 (30%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRKK---ITSVHEN 259 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E K I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 260 TTADE--MKGIIEAVKNSDAIDQAF-AFSERYLHKALEIIKPLPRGQAKYALQNVAKYIG 316 Query: 319 QR 320 +R Sbjct: 317 KR 318 >gi|29831407|ref|NP_826041.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] gi|29608522|dbj|BAC72576.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] Length = 336 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 12/309 (3%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ S+V I + ++L+ +GGKR RP+L + A + V A +E H AT Sbjct: 31 LLEATKSEVPFITEAAQHLVRAGGKRFRPLLVMLAARFGDPYAPGLVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A WGN +VL GDFL ++A ++ EA+ + Sbjct: 91 LYHDDVMDEADVRRGVPSANARWGNSVAVLTGDFLFARA-SHILADLGPEAVRVQAEAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + + E YL V+ KT L + A ++++G +V L YG Sbjct: 150 RLVTGQILETAGPMDGRDPVEHYLEVLSGKTGALVAVACRFGAMMSGADETVVDVLTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR----GTKREKNFWK 254 LG+AFQL DDVLD + +E GK G D R G PTLPV+ +R G + + Sbjct: 210 ERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIPTLPVLRLRERVARLGLAEDIALCE 269 Query: 255 ---STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 S + D E L + +R + AL Y + A+ +L L + + K +L+ Sbjct: 270 LLDSDLTDDARHAEALTR----LRAHPALEQARKDTVRYVEDARAALAPLAECNAKAALI 325 Query: 312 EVVDFCLQR 320 E+ D + R Sbjct: 326 ELCDAVVHR 334 >gi|294630816|ref|ZP_06709376.1| trans-hexaprenyltranstransferase [Streptomyces sp. e14] gi|292834149|gb|EFF92498.1| trans-hexaprenyltranstransferase [Streptomyces sp. e14] Length = 336 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 92/305 (30%), Positives = 156/305 (51%), Gaps = 4/305 (1%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ S+V I + ++L+ +GGKR RP+L + A + V A +E H AT Sbjct: 31 LLEATKSEVPFITEAAQHLVKAGGKRFRPLLVMLAAQFGDPYAPGIVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++A+RRG +A WGN +VL GDFL ++A ++ EA+ +L Sbjct: 91 LYHDDVMDEAAVRRGVASANTRWGNSVAVLTGDFLFARA-SQILADLGPEAVRVQALAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + + ++++G +V L YG Sbjct: 150 RLVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK--REKNFWKST 256 LG+AFQL DDVLD + +E GK G D R G TLPV+ +R + ++ Sbjct: 210 ERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRLRERAARLGLPEDVALCE 269 Query: 257 INDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + D ++ + +A +R + AL Y ++A+ +L L + K +L+++ D Sbjct: 270 LLDSDLTDDARHAEALAALRAHPALEQARRDTVRYAEEARAALAPLRECDAKAALLQLCD 329 Query: 316 FCLQR 320 + R Sbjct: 330 AVVHR 334 >gi|228938725|ref|ZP_04101329.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971607|ref|ZP_04132230.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228788130|gb|EEM36086.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820966|gb|EEM66987.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 305 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 8 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 67 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 68 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 127 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 128 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 187 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 188 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRQK---ITSVHEN 244 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 245 TTASE--MQEIIDAVKNSPAIDQAF-AFSERYLHKALEIIKPLPRGKAKYALQNVAKYIG 301 Query: 319 QR 320 +R Sbjct: 302 KR 303 >gi|228920324|ref|ZP_04083671.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229043359|ref|ZP_04191076.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH676] gi|229109069|ref|ZP_04238669.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock1-15] gi|229126927|ref|ZP_04255938.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-Cer4] gi|229144212|ref|ZP_04272626.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-ST24] gi|229149811|ref|ZP_04278040.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus m1550] gi|228633675|gb|EEK90275.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus m1550] gi|228639220|gb|EEK95636.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-ST24] gi|228656527|gb|EEL12354.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-Cer4] gi|228674347|gb|EEL29591.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock1-15] gi|228725940|gb|EEL77180.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH676] gi|228839347|gb|EEM84641.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 305 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 8 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 67 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 68 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 127 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 128 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 187 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 188 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRQK---ITSVHEN 244 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 245 STASE--MQEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGKAKYALQNVAKYIG 301 Query: 319 QR 320 +R Sbjct: 302 KR 303 >gi|317509118|ref|ZP_07966745.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974] gi|316252589|gb|EFV12032.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974] Length = 338 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/299 (31%), Positives = 161/299 (53%), Gaps = 14/299 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLAC 69 +++V +I+ + S +E + V ++L +GGKR RPM T+ + E RGD + A Sbjct: 25 LDRVESIIIAEVESGIEAMAAVAEHLAKAGGKRFRPMFTVVAGQLGADERRGDVEIA-AS 83 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+E IH ATL HDDV+D++ +RRG +A + WGNQ ++L GD+L ++A ++ + S Sbjct: 84 ALELIHLATLYHDDVMDEATMRRGVPSANVQWGNQIAILAGDYLFARACGLIAKLGS--- 140 Query: 130 LEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 EA S+VA T E G+L+++ ++ E YL VI KTA L A ++ L Sbjct: 141 -EATSIVAQTFGELVTGQLQEVLGAQGERDKIEHYLTVIFGKTASLLGACGRLAGLAIRA 199 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 V+ L G +G+AFQ+ DD++D + GK G D R G TLP++ A + Sbjct: 200 DRQVQDQLAVIGELVGMAFQIADDIIDIGSGSADSGKTPGTDLREGVLTLPMLYALE--- 256 Query: 247 KREKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + ++ ++ G ++ E + +A ++ + + + + Y ++A + + LPDS Sbjct: 257 AQGEDRLNEILSSGPVADEAVVAEALGLLAVSSGMARAKEKVADYARRADEEIGKLPDS 315 >gi|298490219|ref|YP_003720396.1| solanesyl diphosphate synthase ['Nostoc azollae' 0708] gi|298232137|gb|ADI63273.1| solanesyl diphosphate synthase ['Nostoc azollae' 0708] Length = 323 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 92/290 (31%), Positives = 162/290 (55%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP +L ++ A MLE H LA E IHTA+L+HDDVVD+S +R Sbjct: 38 EHLFGAGGKRIRPAIVLLISRATMLEKDITPRHRRLAEITEMIHTASLVHDDVVDESNVR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG ++GN+ +VL GDFL +Q+ + + + ++ LS V LA GE++Q Sbjct: 98 RGVPTVHSLFGNRIAVLAGDFLFAQSSWYLANLDNLDVVKLLSEVIMDLAAGEIQQGLNR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +++ E YL KTA L + + + + L++ V + L +YG +LG+AFQ+VDD+ Sbjct: 158 FDTNLSTETYLKKSYYKTASLIANSSKAAGLLSEVSQKSAENLYNYGKHLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ G + +GK G D ++G T PV+ A +E+ + + I +L++A Sbjct: 218 LDFTGSTDTLGKPAGSDLKSGNLTAPVLFAL-----KEQPYLEVLIERELAQEGDLEQAV 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++ +++ + A + + + + + L S +++L+ + D+ L RL Sbjct: 273 GLILDSQGIQKARELAAHHAKASGEQIATLEPSESRQALINMTDYVLSRL 322 >gi|194477144|ref|YP_002049323.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Paulinella chromatophora] gi|171192151|gb|ACB43113.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Paulinella chromatophora] Length = 323 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 161/304 (52%), Gaps = 10/304 (3%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATL 79 I +D ++ ++L +GGKR+RP + L + L GD H LA E IHTA+L Sbjct: 26 IGADHPILQAAAEHLFSAGGKRIRPGIVLLLSRALSPTGDLSPRHRRLAEITEMIHTASL 85 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 +HDDVVD++A RRG + ++ +VL GDFL +QA + + E ++ LS V Sbjct: 86 VHDDVVDEAATRRGVATVHSRFNHRVAVLAGDFLFAQASWHLANLDNLEVVKLLSRVIMD 145 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 LA+GE++Q N + E Y+ KTA L + + + ++A + L +G Sbjct: 146 LADGEVKQGLFRYNTRQSFETYIEKSYCKTASLIANSARAAGVLADLNEEHLVQLYRFGR 205 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 LG+AFQ+VDD+LD+ G ++GK D +G T PV+ A + EK I + Sbjct: 206 QLGLAFQVVDDILDFTGSDQQLGKPAASDLVSGYLTAPVLYALE-----EKPMLADLI-E 259 Query: 260 GKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 GK + +L++A ++R + A+ + A + ++A S++ LP S +L+ + DF + Sbjct: 260 GKFNQGIDLEQALELVRNSEAINRSRTLAEGFAREAHKSIQWLPSSEACNALLALPDFVI 319 Query: 319 QRLN 322 RL+ Sbjct: 320 SRLS 323 >gi|256785921|ref|ZP_05524352.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24] Length = 298 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 92/301 (30%), Positives = 151/301 (50%), Gaps = 12/301 (3%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 + I + ++L+ +GGKR RP+L + +A + V A +E H ATL HDDV+D Sbjct: 1 MPFITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDVMD 60 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 ++A+RRG +A W N +VL GDFL ++A ++ EA+ +L L G++ Sbjct: 61 EAAVRRGVPSANTRWDNSVAVLTGDFLFARA-SQILADLGPEAVRVQALAFERLVTGQIL 119 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + ++ + YL V+ KT L + + ++++G +V L YG LG+AFQ Sbjct: 120 ETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGVAFQ 179 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK-------NFWKSTIND 259 L DDVLD + +E GK G D R G PTLPV+ +R + S ++D Sbjct: 180 LADDVLDIASDSDESGKTPGTDLREGIPTLPVLRLRERAARLGLAEDLALCELLDSDLSD 239 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 E L+ ++R + AL Y ++A+ +L L + K +L+E+ D + Sbjct: 240 DARHAEALR----LLRAHPALEQARRDTVRYAEEARAALAPLRECDAKAALVELCDAVVH 295 Query: 320 R 320 R Sbjct: 296 R 296 >gi|30261609|ref|NP_843986.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Ames] gi|47526809|ref|YP_018158.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. 'Ames Ancestor'] gi|65318879|ref|ZP_00391838.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis str. A2012] gi|165869531|ref|ZP_02214190.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0488] gi|167633294|ref|ZP_02391619.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0442] gi|167639098|ref|ZP_02397371.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0193] gi|170686048|ref|ZP_02877270.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0465] gi|170706518|ref|ZP_02896978.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0389] gi|177650331|ref|ZP_02933298.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0174] gi|190568668|ref|ZP_03021573.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis Tsiankovskii-I] gi|196033307|ref|ZP_03100719.1| heptaprenyl diphosphate synthase component II [Bacillus cereus W] gi|196038886|ref|ZP_03106193.1| heptaprenyl diphosphate synthase component II [Bacillus cereus NVH0597-99] gi|196046652|ref|ZP_03113876.1| heptaprenyl diphosphate synthase component II [Bacillus cereus 03BB108] gi|206975027|ref|ZP_03235942.1| heptaprenyl diphosphate synthase component II [Bacillus cereus H3081.97] gi|218902725|ref|YP_002450559.1| heptaprenyl diphosphate synthase component II [Bacillus cereus AH820] gi|222095243|ref|YP_002529303.1| heptaprenyl diphosphate synthase component ii [Bacillus cereus Q1] gi|225863477|ref|YP_002748855.1| heptaprenyl diphosphate synthase component II [Bacillus cereus 03BB102] gi|227815639|ref|YP_002815648.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. CDC 684] gi|228932902|ref|ZP_04095767.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229195814|ref|ZP_04322574.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus m1293] gi|229602685|ref|YP_002866017.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0248] gi|254683101|ref|ZP_05146962.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. CNEVA-9066] gi|254723689|ref|ZP_05185475.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A1055] gi|254734450|ref|ZP_05192162.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Western North America USA6153] gi|254740861|ref|ZP_05198549.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Kruger B] gi|254755099|ref|ZP_05207133.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Vollum] gi|254759636|ref|ZP_05211660.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Australia 94] gi|301053151|ref|YP_003791362.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis CI] gi|30255463|gb|AAP25472.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Ames] gi|47501957|gb|AAT30633.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. 'Ames Ancestor'] gi|164714971|gb|EDR20489.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0488] gi|167512888|gb|EDR88261.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0193] gi|167531332|gb|EDR94010.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0442] gi|170128616|gb|EDS97483.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0389] gi|170669745|gb|EDT20486.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0465] gi|172083475|gb|EDT68535.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0174] gi|190560268|gb|EDV14248.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis Tsiankovskii-I] gi|195993741|gb|EDX57697.1| heptaprenyl diphosphate synthase component II [Bacillus cereus W] gi|196022585|gb|EDX61268.1| heptaprenyl diphosphate synthase component II [Bacillus cereus 03BB108] gi|196030031|gb|EDX68631.1| heptaprenyl diphosphate synthase component II [Bacillus cereus NVH0597-99] gi|206747046|gb|EDZ58438.1| heptaprenyl diphosphate synthase component II [Bacillus cereus H3081.97] gi|218538499|gb|ACK90897.1| heptaprenyl diphosphate synthase component II [Bacillus cereus AH820] gi|221239301|gb|ACM12011.1| heptaprenyl diphosphate synthase component II [Bacillus cereus Q1] gi|225790502|gb|ACO30719.1| heptaprenyl diphosphate synthase component II [Bacillus cereus 03BB102] gi|227004676|gb|ACP14419.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. CDC 684] gi|228587711|gb|EEK45769.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus m1293] gi|228826705|gb|EEM72474.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229267093|gb|ACQ48730.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0248] gi|300375320|gb|ADK04224.1| heptaprenyl diphosphate synthase component II [Bacillus cereus biovar anthracis str. CI] gi|324325630|gb|ADY20890.1| heptaprenyl diphosphate synthase component II [Bacillus thuringiensis serovar finitimus YBT-020] Length = 320 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 12/304 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT--KREKNFWKSTIN 258 +G+++Q++DD+LD+ ++GK G D G TLP + A + K+ ++ ++T Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPILCKKIRSVHENTTA 262 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDF 316 D K I +N A +D + A+S Y KA + ++ LP K +L V + Sbjct: 263 DE-------MKEIIEAVKNSAAIDKAF-AFSERYLHKALEMIKPLPRGQAKYALQNVAKY 314 Query: 317 CLQR 320 +R Sbjct: 315 IGKR 318 >gi|301308384|ref|ZP_07214338.1| polyprenyl synthetase [Bacteroides sp. 20_3] gi|300833854|gb|EFK64470.1| polyprenyl synthetase [Bacteroides sp. 20_3] Length = 324 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/316 (31%), Positives = 162/316 (51%), Gaps = 14/316 (4%) Query: 19 ILKRICSDVEMIP---------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 IL+RI S++ + + ++Y++ GGKR+RP LTL + +N + A Sbjct: 7 ILQRIKSEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPAL 66 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E H TLLHDD++D++ RR K VW T++L GD +L A+ ++ T+ Sbjct: 67 GLEVFHNFTLLHDDLMDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHL 126 Query: 130 LEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L L T AE G+ + +DV+EE+Y+ +I+ KTAVL + AL+ +L+ G Sbjct: 127 KQVLDLFTQTAAEICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLACALKTGALLGGA 186 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 L ++G+N+G+AFQL DD+LD G+ GKNIG D K T +I A + Sbjct: 187 SQKDADHLYAFGINIGLAFQLQDDLLDVYGDTATFGKNIGGDILCNKKTFLLINALRLAN 246 Query: 247 KREKNFWKSTINDGKISVENLKKAFI-IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 K + +S ++ + +AF I E + TE + +Y + ++L L + Sbjct: 247 KEQAEALRSWMDKKEFDPAQKIQAFTSIYNELQLKQLTENKIQAYYDASVENLNALQVAP 306 Query: 306 WKKSLM-EVVDFCLQR 320 K +++ EV D + R Sbjct: 307 EKLTILKEVCDHLMHR 322 >gi|229069166|ref|ZP_04202457.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus F65185] gi|228713918|gb|EEL65802.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus F65185] Length = 320 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRQK---ITSVHEN 259 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 260 STASE--IQEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGKAKYALQNVAKYIG 316 Query: 319 QR 320 +R Sbjct: 317 KR 318 >gi|302864915|ref|YP_003833552.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] gi|302567774|gb|ADL43976.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] Length = 346 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 156/316 (49%), Gaps = 10/316 (3%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +++V + + S ++ + ++L+ +GGKR RP+L A + D V A + Sbjct: 36 LDRVETNLRASVASADPLVTEASRHLVEAGGKRFRPLLVALGAQFGDPDTDQVVPAAVVM 95 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D++A+RRG +A W N ++LVGD+L ++A + + E Sbjct: 96 ELTHLATLYHDDVMDEAAVRRGAPSANSRWTNSVAILVGDYLFARAADIAADLGP----E 151 Query: 132 ALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A+ L A T A G++ + ++ D YLHVI KT L + + + G Sbjct: 152 AVRLQARTFARLVHGQIAETVGPRDTDPVAH-YLHVIAEKTGSLIATSARFGGMFGGAAP 210 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +AL YG +G+AFQL DD+LD E + GK G D R G PTLPV+ A Sbjct: 211 EHVEALAEYGEIIGVAFQLSDDLLDIASESVQSGKTPGTDLREGVPTLPVLYAMASDDAD 270 Query: 249 EKNF-WKSTINDGKISVENLK-KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + + G + + L +A ++RE+ AL SY + A+ L LP+ Sbjct: 271 AASVRLREILATGPLVDDALHAEALGLLRESPALKRARETVRSYAEDARARLAPLPEGPA 330 Query: 307 KKSLMEVVDFCLQRLN 322 +++L + D+ R + Sbjct: 331 RRALESLCDYIADRTS 346 >gi|268317461|ref|YP_003291180.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252] gi|262334995|gb|ACY48792.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252] Length = 332 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/302 (33%), Positives = 157/302 (51%), Gaps = 15/302 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 + V ++ V +YL+ GKR+RP+L L TA + + A +E +H+ATL+HDDV Sbjct: 38 TSVPLLDHVARYLLRQKGKRIRPLLVLLTAKLCGGITEATYRAAALVELLHSATLVHDDV 97 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VD + RRG + +W N+ +VL GDFLLS+ + ++ + + L ALS ++EGE Sbjct: 98 VDGAEQRRGMFSINAIWKNKVAVLFGDFLLSRGLLLALDHRDYDTLHALSDAVRRMSEGE 157 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ S++LD+ E Y +I KTA L +A + +L A V + G LG+A Sbjct: 158 LLQIEKSRHLDIDEATYFRIISDKTASLIAACTKSGALSATDDPRVIDEMYLMGEKLGLA 217 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW------KSTIN 258 FQ+ DD+ DY GE E GK IG D + K TLP+I A + E+ K Sbjct: 218 FQIRDDLFDY-GE--EAGKPIGNDLKEKKLTLPLIYALRMAPSSERRRILRIVRKKKKTR 274 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 D +V + +A+ M RA R + +A+ L P + +L+++VD+ + Sbjct: 275 DDIQTVADFAEAYGGMAYARA------RMEALAGEARAILERYPPGDARDALIDLVDYTV 328 Query: 319 QR 320 R Sbjct: 329 TR 330 >gi|49184441|ref|YP_027693.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Sterne] gi|49481018|ref|YP_035730.1| heptaprenyl diphosphate synthase component II [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49178368|gb|AAT53744.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Sterne] gi|49332574|gb|AAT63220.1| heptaprenyl diphosphate synthase component II [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 323 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 12/304 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 26 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 85 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 86 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 145 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 146 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYF 205 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT--KREKNFWKSTIN 258 +G+++Q++DD+LD+ ++GK G D G TLP + A + K+ ++ ++T Sbjct: 206 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPILCKKIRSVHENTTA 265 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDF 316 D K I +N A +D + A+S Y KA + ++ LP K +L V + Sbjct: 266 DE-------MKEIIEAVKNSAAIDKAF-AFSERYLHKALEMIKPLPRGQAKYALQNVAKY 317 Query: 317 CLQR 320 +R Sbjct: 318 IGKR 321 >gi|118477067|ref|YP_894218.1| heptaprenyl diphosphate synthase, component II [Bacillus thuringiensis str. Al Hakam] gi|118416292|gb|ABK84711.1| heptaprenyl diphosphate synthase, component II [Bacillus thuringiensis str. Al Hakam] Length = 323 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/303 (30%), Positives = 159/303 (52%), Gaps = 10/303 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 26 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 85 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 86 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 145 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 146 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYF 205 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT--KREKNFWKSTIN 258 +G+++Q++DD+LD+ ++GK G D G TLP + A + K+ ++ ++T Sbjct: 206 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPILCKKIRSVHENTTA 265 Query: 259 DG-KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 D K +E +K + I ++A V +E Y KA + ++ LP K +L V + Sbjct: 266 DEMKEIIEAVKNSAAI---DKAFVFSE----RYLHKALEMIKPLPRGQAKYALQNVAKYI 318 Query: 318 LQR 320 +R Sbjct: 319 GKR 321 >gi|332524057|ref|ZP_08400309.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176] gi|332315321|gb|EGJ28306.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176] Length = 326 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 9/308 (2%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVL--LACAIEFI 74 LI KR+ I + + L +GGK LRP L T+ + + D+ L +A ++E + Sbjct: 21 LIEKRVQVRNTDIQEAIIQLAQAGGKYLRPAFFFLFTSFGPKEKQDSEQLTKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 H ATL+HDDV+DDS LRRG+V + +G +V GDFL + F +++ET +++ Sbjct: 81 HMATLIHDDVIDDSPLRRGQVTVQTQFGKDIAVYTGDFLFTIFFELILETMQDSPYMSIN 140 Query: 135 LVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 A + GEL Q+ L N + + DYL I KTA LF A + G V Sbjct: 141 AKAMKKILVGELDQMHLYFNQEQSIRDYLRSISGKTAELFRLASLEGAYFGGASPDVVSK 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 G ++G+ FQ++DD+LDY + + K I ED NG +LP++ A K N + Sbjct: 201 AGRIGYHIGMTFQILDDILDYTAKEKDFNKPILEDITNGVYSLPLLFAI----KNNPNAF 256 Query: 254 KSTIN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 K ++ +++ E L+ ++ +N + + A Y QKA D ++ LP +K L++ Sbjct: 257 KELLDKKDQLTAEELRTIAQLVLDNHGVEKAQELARQYTQKAIDDIKALPKIKVQKQLLQ 316 Query: 313 VVDFCLQR 320 + + L+R Sbjct: 317 LTNHLLKR 324 >gi|229078796|ref|ZP_04211349.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock4-2] gi|228704478|gb|EEL56911.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock4-2] Length = 305 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 90/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 8 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 67 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 68 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 127 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 128 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 187 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 188 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRQK---ITSVHEN 244 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 245 STASE--IQEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGKAKYALQNVAKYIG 301 Query: 319 QR 320 +R Sbjct: 302 KR 303 >gi|89889496|ref|ZP_01201007.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7] gi|89517769|gb|EAS20425.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7] Length = 327 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/208 (39%), Positives = 119/208 (57%), Gaps = 5/208 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D V Y++ GGKRLRP+LTL +A M + D + A A+E H TLLHDD++DD+ LR Sbjct: 29 DPVHYILQLGGKRLRPILTLMSAQMYGGKIDKAMDAAIAVEVFHNFTLLHDDIMDDADLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL----EALSLVACTLAEGELRQ 147 RGK + W T +L GD +L A+ + + E + S A + EG+ Sbjct: 89 RGKETVHVKWDVNTGILSGDAMLIMAY-QLFNSYDPETFYWLNQVFSKTALEVCEGQQYD 147 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + DVT +Y+++IK KT+VL AL++ ++IAGV +Q + YG+N+G+AFQL Sbjct: 148 VDFETRDDVTISEYINMIKLKTSVLVGCALQMGAIIAGVNKKEQQLIYDYGINIGLAFQL 207 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +DD LD G+ GK +G D R K T Sbjct: 208 MDDYLDAFGDPATFGKEVGGDIRENKKT 235 >gi|229016870|ref|ZP_04173798.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH1273] gi|229023076|ref|ZP_04179590.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH1272] gi|228738222|gb|EEL88704.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH1272] gi|228744431|gb|EEL94505.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH1273] Length = 320 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/300 (29%), Positives = 156/300 (52%), Gaps = 4/300 (1%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + +A +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPDAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + REK ++N+ Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLREKII---SVNEN 259 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + E +K+ ++ + A+ + Y KA + ++ LP K +L V + +R Sbjct: 260 TAASE-MKEIIDDIKASEAIDKAFSFSERYLHKALEIIKPLPRGQAKYALQNVAKYIGKR 318 >gi|228907246|ref|ZP_04071106.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis IBL 200] gi|228852386|gb|EEM97180.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis IBL 200] Length = 320 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 90/302 (29%), Positives = 157/302 (51%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K ++++ Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPALRQKII---SVHEN 259 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 260 TTASE--MQEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGQAKYALQNVAKYIG 316 Query: 319 QR 320 +R Sbjct: 317 KR 318 >gi|228926644|ref|ZP_04089713.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228945213|ref|ZP_04107569.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229090575|ref|ZP_04221810.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-42] gi|229121156|ref|ZP_04250393.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus 95/8201] gi|229138307|ref|ZP_04266902.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-ST26] gi|229183808|ref|ZP_04311025.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BGSC 6E1] gi|228599657|gb|EEK57260.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BGSC 6E1] gi|228645199|gb|EEL01436.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-ST26] gi|228662275|gb|EEL17878.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus 95/8201] gi|228692778|gb|EEL46502.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-42] gi|228814448|gb|EEM60713.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228833020|gb|EEM78588.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 305 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 12/304 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 8 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 67 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 68 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 127 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 128 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYF 187 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT--KREKNFWKSTIN 258 +G+++Q++DD+LD+ ++GK G D G TLP + A + K+ ++ ++T Sbjct: 188 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPILCKKIRSVHENTTA 247 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDF 316 D K I +N A +D + A+S Y KA + ++ LP K +L V + Sbjct: 248 DE-------MKEIIEAVKNSAAIDKAF-AFSERYLHKALEMIKPLPRGQAKYALQNVAKY 299 Query: 317 CLQR 320 +R Sbjct: 300 IGKR 303 >gi|25027039|ref|NP_737093.1| putative transferase [Corynebacterium efficiens YS-314] gi|259508477|ref|ZP_05751377.1| polyprenyl synthetase [Corynebacterium efficiens YS-314] gi|23492319|dbj|BAC17293.1| putative transferase [Corynebacterium efficiens YS-314] gi|259163941|gb|EEW48495.1| polyprenyl synthetase [Corynebacterium efficiens YS-314] Length = 350 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 16/318 (5%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACA 70 M++V +LK + + + D V +L +GGKR RPM L A+ + DN + A Sbjct: 42 MQQVEDRLLKELSIGEDFLVDKVTHLARAGGKRFRPMFALLASEFGAKPLSDNVIKAAVV 101 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E H ATL HDDV+D++ +RRG +A W N ++L GD LL+ A ++ SQ + Sbjct: 102 VEITHLATLYHDDVMDEATMRRGVPSANSRWDNSVAILAGDILLAHASRIM----SQLGM 157 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 E ++ A T E G++R+ ++ D + Y+ VI+ KTAVL ++A + S+ A Sbjct: 158 ETVAHFAETFGELVTGQMRETVGARGGDPVDH-YMKVIREKTAVLIASAGFLGSMHADAT 216 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ALK +G +G+ FQ+VDD++D E E GK G D R G TLPV+ A + T+ Sbjct: 217 PEHVDALKKFGAAVGMIFQIVDDIIDIFSETAESGKTPGTDLREGVFTLPVLYAMREQTE 276 Query: 248 ---REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + + I D + + +A ++ ++ + + Y A L LPD+ Sbjct: 277 VGAQLREILTGPIEDD----DTVDRALELLAQSGGRREALADVHHYMAIANAELDRLPDN 332 Query: 305 SWKKSLMEVVDFCLQRLN 322 S K +L + F +QR+ Sbjct: 333 SVKDALRNLAIFTVQRVG 350 >gi|163939429|ref|YP_001644313.1| heptaprenyl diphosphate synthase component II [Bacillus weihenstephanensis KBAB4] gi|229010921|ref|ZP_04168117.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides DSM 2048] gi|229058249|ref|ZP_04196637.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH603] gi|229132421|ref|ZP_04261275.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-ST196] gi|229166460|ref|ZP_04294216.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH621] gi|163861626|gb|ABY42685.1| Heptaprenyl diphosphate synthase component II [Bacillus weihenstephanensis KBAB4] gi|228617034|gb|EEK74103.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH621] gi|228651127|gb|EEL07108.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-ST196] gi|228720113|gb|EEL71697.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH603] gi|228750321|gb|EEM00151.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides DSM 2048] Length = 320 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 93/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + +A +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPDAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---------- 250 +G+++Q++DD+LD+ ++GK G D G TLPV+ A + R+K Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPVLYAMEDPVLRQKITSVHENTTA 262 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + K I+D K S E + KAF Y KA + ++ LP K +L Sbjct: 263 SEMKEIIDDIKAS-EAIDKAFSFSER-------------YLHKALEIIKPLPRGQAKYAL 308 Query: 311 MEVVDFCLQR 320 V + +R Sbjct: 309 QNVAKYIGKR 318 >gi|47565976|ref|ZP_00237014.1| heptaprenyl diphosphate syntase component II [Bacillus cereus G9241] gi|228984692|ref|ZP_04144865.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229155179|ref|ZP_04283291.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC 4342] gi|47556893|gb|EAL15223.1| heptaprenyl diphosphate syntase component II [Bacillus cereus G9241] gi|228628306|gb|EEK85021.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC 4342] gi|228775086|gb|EEM23479.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 320 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 12/304 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT--KREKNFWKSTIN 258 +G+++Q++DD+LD+ ++GK G D G TLP + A + K+ ++ ++T Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPILCKKIRSVHENTTA 262 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDF 316 D K I +N A +D + A+S Y KA + ++ LP K +L V + Sbjct: 263 DE-------MKEIIEAVKNSAAIDKAF-AFSERYLHKALEIIKPLPRGQAKYALQNVAKY 314 Query: 317 CLQR 320 +R Sbjct: 315 IGKR 318 >gi|255037310|ref|YP_003087931.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053] gi|254950066|gb|ACT94766.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053] Length = 324 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 156/298 (52%), Gaps = 17/298 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y++ GGKR RP+LTL A + + D + A A+E H TL+HDD++D + LRRG Sbjct: 31 ISYIMSLGGKRFRPLLTLLAASIFDTDIDKAIKPAMAVEVFHNFTLMHDDIMDRAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAEGELRQLSL 150 W T++L GD +L +A+ ++++ ++ L + A + EG+ ++ Sbjct: 91 MPTVHEKWDANTAILSGDVMLIRAYDLLLDIPKEQLRSVLARFNRTAAEVCEGQQLDMNF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 K DVTE +Y+ +I+ KT+VL ALE+ +IAG + Q L S G N+GI FQL DD Sbjct: 151 EKRWDVTEAEYIGMIRLKTSVLLGFALELGGIIAGADDETVQLLYSAGENMGIGFQLKDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT---KREKNFWKS--TINDGK--IS 263 +LD G+ + GK +G D K T +I A + K E + W S T ++ + + Sbjct: 211 LLDVYGDPAKFGKQVGGDIIANKKTFLLIEALSKANGDLKTELDRWISLDTFDNAEKVAA 270 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320 V + A I RA TE++ Y + SL+ L DS K L++ VD + R Sbjct: 271 VTGIYDALGI----RAF--TEHKINEYFSRGIASLQQLRSDSVQKDVLLQFVDQLVAR 322 >gi|19112068|ref|NP_595276.1| decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces pombe 972h-] gi|20137618|sp|O43091|DPS1_SCHPO RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName: Full=All-trans-decaprenyl-diphosphate synthase subunit 1; AltName: Full=Decaprenyl pyrophosphate synthase subunit 1 gi|1845555|dbj|BAA12314.1| decaprenyl diphosphate synthase subunit 1 [Schizosaccharomyces pombe] gi|6714819|emb|CAB66154.1| decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces pombe] Length = 378 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 108/349 (30%), Positives = 173/349 (49%), Gaps = 51/349 (14%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALM----LEYRGD 62 ++E+++ I + + S+ E + + KY + GK++RP L L AT+L GD Sbjct: 40 ELEQISPGIRQMLNSNSEFLEECSKYYTIAQGKQMRPSLVLLMSKATSLCHGIDRSVVGD 99 Query: 63 NHV------------------LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 ++ LA E IH A+LLHDDV+D + +RRG ++ + +GN+ Sbjct: 100 KYIDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHDDVIDHANVRRGSPSSNVAFGNR 159 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS---KNLDVTEEDY 161 S+L G+F+L++A + ++ + E L+ V L GE QL + +L++ + ++ Sbjct: 160 RSILAGNFILARASTAMARLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSLEIKQSNF 219 Query: 162 LHVIKS---KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + I+ KTA L S + + S+++ +V A YG +G AFQL+DDVLDY + Sbjct: 220 DYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLDYTSKD 279 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278 + +GK G D + G T PV+ A WK G + V I R R Sbjct: 280 DTLGKAAGADLKLGLATAPVLFA-----------WKKYPELGAMIVNRFNHPSDIQRA-R 327 Query: 279 ALVD-------TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +LV+ T A Y +KAKDSL CLPDS +K+L + D + R Sbjct: 328 SLVECTDAIEQTITWAKEYIKKAKDSLLCLPDSPARKALFALADKVITR 376 >gi|75762755|ref|ZP_00742585.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase / Farnesyltransferase / Heptaprenyl diphosphate synthase component II [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489758|gb|EAO53144.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase / Farnesyltransferase / Heptaprenyl diphosphate synthase component II [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 323 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 26 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 85 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 86 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 145 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 146 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 205 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R++ +++++ Sbjct: 206 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRQQ---ITSVHEN 262 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 263 STASE--MQEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGQAKYALQNVAKYIG 319 Query: 319 QR 320 +R Sbjct: 320 KR 321 >gi|290958235|ref|YP_003489417.1| polyprenyl diphosphate synthase [Streptomyces scabiei 87.22] gi|260647761|emb|CBG70866.1| putative polyprenyl diphosphate synthase [Streptomyces scabiei 87.22] Length = 336 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/312 (30%), Positives = 158/312 (50%), Gaps = 4/312 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M V +L+ S+V I + ++L+ +GGKR RP+L + A + V A + Sbjct: 24 MAAVEEGLLEATKSEVPFIQEAAQHLLRAGGKRFRPLLVMLAAQFGDPYAPGVVPSAVVV 83 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D++ +RRG +A W N +VL GDFL ++A V+ +A+ Sbjct: 84 ELTHLATLYHDDVMDEAEVRRGVPSANARWDNSLAVLTGDFLFARA-SHVLADLGPDAVR 142 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + L G++ + + ++ + YL V+ KT L + A + +L+AG +V Sbjct: 143 IQAEAFERLVTGQILETAGPRDGRDPIDHYLDVLGGKTGSLVAVAGRLGALMAGADETVV 202 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK--RE 249 L YG LG+AFQL DDVLD + +E GK G D R PT+PV+ +R + Sbjct: 203 DVLTQYGERLGVAFQLADDVLDVASDSHESGKTPGTDLREHVPTMPVLRLRERAGRLGLP 262 Query: 250 KNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 ++ + D ++ + L +A +R + AL Y ++A+ +L LP+ K Sbjct: 263 EDIALCELLDSDLTDDARLAEALSRLRVHPALEQARRDTVRYAEEARSALSPLPECDAKA 322 Query: 309 SLMEVVDFCLQR 320 +L+E+ D + R Sbjct: 323 ALVELCDAVVHR 334 >gi|52143833|ref|YP_082994.1| heptaprenyl diphosphate synthase component II [Bacillus cereus E33L] gi|51977302|gb|AAU18852.1| heptaprenyl diphosphate synthase component II [Bacillus cereus E33L] Length = 323 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 12/304 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 26 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 85 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 86 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 145 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 146 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYF 205 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT--KREKNFWKSTIN 258 +G+++Q++DD+LD+ ++GK G D G TLP + A + K+ ++ ++T Sbjct: 206 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPILCKKIRSVHENTTA 265 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDF 316 D K I +N A +D + A+S Y KA + ++ LP K +L V + Sbjct: 266 DE-------MKEIIEAVKNSASIDKAF-AFSERYLHKALEMIKPLPRGQAKYALQNVAKY 317 Query: 317 CLQR 320 +R Sbjct: 318 IGKR 321 >gi|227552808|ref|ZP_03982857.1| possible trans-hexaprenyltranstransferase [Enterococcus faecium TX1330] gi|257897275|ref|ZP_05676928.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com12] gi|293378986|ref|ZP_06625141.1| polyprenyl synthetase [Enterococcus faecium PC4.1] gi|227178051|gb|EEI59023.1| possible trans-hexaprenyltranstransferase [Enterococcus faecium TX1330] gi|257833840|gb|EEV60261.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com12] gi|292642527|gb|EFF60682.1| polyprenyl synthetase [Enterococcus faecium PC4.1] Length = 328 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 165/311 (53%), Gaps = 15/311 (4%) Query: 20 LKRICSDVEM----IPDVVKYLIFSGGKRLRPMLTLA-TALMLEYRGDNHVLLACAIEFI 74 LKR+ V + + +K I +GGK LRP L + E D + LA +IE + Sbjct: 21 LKRMEETVRLKNKPVEQAIKETIHAGGKLLRPAYQLLFSQFGPEQDRDKAIALAASIEML 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDD+VD++ LRRG+ R +GN SV GD+L C + + +L++L Sbjct: 81 HTATLIHDDIVDEADLRRGQPNIRSQFGNVVSVYAGDYLF--VCCFKLLSDYSTSLKSLQ 138 Query: 135 LVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L + ++ + GEL Q+ N +++ ++YL I KTA LF + V + +G Sbjct: 139 LNSRSMEKVLNGELGQMDDRYNYELSVKEYLENISGKTAELFQLSCSVGAFESGTSERFA 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + G+++G+AFQ++DD+LDY E E+GK + ED R G +LP+I + Q K +++ Sbjct: 199 KKAGDIGLSIGMAFQIIDDILDYTKESQEIGKPVLEDMRQGVYSLPLIYSLQ---KNKQS 255 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW--KKS 309 K++ E+++ I+ + + + A +Y +KA ++ LPD+S +++ Sbjct: 256 LLPYLEKKTKMTEEDIEAVRKIVERTGGVGEAKKLAAAYTEKALKEIKKLPDTSLRTREN 315 Query: 310 LMEVVDFCLQR 320 L + L R Sbjct: 316 LFSLTQLILDR 326 >gi|228900194|ref|ZP_04064426.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis IBL 4222] gi|228859464|gb|EEN03892.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis IBL 4222] Length = 320 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R++ +++++ Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRQQ---ITSVHEN 259 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 260 STASE--MQEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGQAKYALQNVAKYIG 316 Query: 319 QR 320 +R Sbjct: 317 KR 318 >gi|171679677|ref|XP_001904785.1| hypothetical protein [Podospora anserina S mat+] gi|170939464|emb|CAP64692.1| unnamed protein product [Podospora anserina S mat+] Length = 454 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 143/289 (49%), Gaps = 31/289 (10%) Query: 52 ATALMLEYRGDNHV-------LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 ATA+ E ++H LA E IHTA+LLHDDV+D S RRG +A L +GN+ Sbjct: 175 ATAVAPEAETNDHPDILPSQRRLAEITELIHTASLLHDDVIDHSESRRGSPSANLEFGNK 234 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEED 160 +VL GDFLL +A + + E +E L+ V L EGE QL + +N +EE Sbjct: 235 MAVLAGDFLLGRASVALARLRHAEVIELLATVIANLVEGEFMQLKNTARDERNPQWSEET 294 Query: 161 ---YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 YL KTA L S + ++L+ G + A +YG NLG+AFQLVDD+LDY Sbjct: 295 LTYYLQKTYLKTASLISKSCRAAALLGGSDAATVDAAYAYGKNLGLAFQLVDDMLDYTRS 354 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR-- 275 E+GK G D G T P++ A WK+ G + +K ++R Sbjct: 355 EQELGKPAGADLELGLATAPLLFA-----------WKTMPELGALVGRKFEKEGDVVRAR 403 Query: 276 ----ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ + T A Y QKA D++ PDS K L+E+ L+R Sbjct: 404 DLVAQSDGIEQTRALAEDYAQKAIDAIAPFPDSEAKDGLIEMAVKTLKR 452 >gi|255693279|ref|ZP_05416954.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565] gi|260620958|gb|EEX43829.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565] Length = 324 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 149/291 (51%), Gaps = 7/291 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 VV ++ GK +RP+L L A + + + + A ++E +HTA+L+HDDVVD+S RR Sbjct: 36 VVSHIRQRNGKMMRPILVLLVARLYDVVRPSTLHAAVSLELLHTASLVHDDVVDESTERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VL GD+LL+ + +TKS + +SL+ LA+GEL QLS Sbjct: 96 GQLSVNAIFNNKVAVLTGDYLLATSLVHAEQTKSHLIIRLVSLLGQDLADGELLQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N +E Y VI+ KTA LF+A + ++L + + G +GI FQ+ DD+ Sbjct: 156 NHSFSESVYFDVIRKKTAALFAACTKAAALSVDANEEEAEFARLLGEYIGICFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E+GK G D GK TLP + + DG + + + + Sbjct: 216 DYFNS-KEIGKPTGNDMLEGKLTLPALYVLNNTKDDTAREIAIKVKDGTATPDEIARLIA 274 Query: 273 IMRENRALVDTEYRAYS---YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++EN + EY + Y +KA L LPDS +L +++ + R Sbjct: 275 FIKENGGI---EYAIQTMNLYKEKALGLLASLPDSDVCTALRAYLNYVVDR 322 >gi|150010302|ref|YP_001305045.1| putative isoprenoid biosynthesis related protein [Parabacteroides distasonis ATCC 8503] gi|255012432|ref|ZP_05284558.1| putative isoprenoid biosynthesis related protein [Bacteroides sp. 2_1_7] gi|298374699|ref|ZP_06984657.1| polyprenyl synthetase [Bacteroides sp. 3_1_19] gi|149938726|gb|ABR45423.1| putative isoprenoid biosynthesis related protein [Parabacteroides distasonis ATCC 8503] gi|298269067|gb|EFI10722.1| polyprenyl synthetase [Bacteroides sp. 3_1_19] Length = 324 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/316 (30%), Positives = 163/316 (51%), Gaps = 14/316 (4%) Query: 19 ILKRICSDVEMIP---------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 IL+RI S++ + + ++Y++ GGKR+RP LTL + +N + A Sbjct: 7 ILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPAL 66 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E H TLLHDD++D++ RR K VW T++L GD +L A+ ++ T+ Sbjct: 67 GLEVFHNFTLLHDDLMDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHL 126 Query: 130 LEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L L T AE G+ + +DV+EE+Y+ +I+ KTAVL + +L+ +L+ G Sbjct: 127 KQVLDLFTQTAAEICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLACSLKTGALLGGA 186 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 L ++G+N+G+AFQL DD+LD G+ GKNIG D K T +I A + Sbjct: 187 SQEDAGNLYAFGINIGLAFQLQDDLLDVYGDTATFGKNIGGDILCNKKTFLLINALRLAN 246 Query: 247 KREKNFWKSTINDGKISVENLKKAFI-IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 K + +S ++ + +AF I E + TE + +Y + ++L+ L + Sbjct: 247 KEQAEALRSWMDKKEFDPAQKIQAFTSIYNELQLKQLTENKIQAYYDASVENLKALQVAP 306 Query: 306 WKKSLM-EVVDFCLQR 320 K +++ EV D + R Sbjct: 307 EKLTILKEVCDHLMHR 322 >gi|119509566|ref|ZP_01628713.1| Polyprenyl synthetase [Nodularia spumigena CCY9414] gi|119465755|gb|EAW46645.1| Polyprenyl synthetase [Nodularia spumigena CCY9414] Length = 323 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 93/290 (32%), Positives = 159/290 (54%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEYRGD-NHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP +L ++ A MLE H LA E IHTA+L+HDDVVD+S +R Sbjct: 38 EHLFGAGGKRIRPAIVLLISRATMLEEDITLRHRRLAEITEMIHTASLVHDDVVDESQMR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG ++GN+ +VL GDFL +Q+ + + E ++ LS V LA GE++Q Sbjct: 98 RGVPTVHSLFGNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLATGEIQQGINC 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + ++ E YL KTA L + + + ++L++ + L YG +LG+AFQ+VDD+ Sbjct: 158 FDNGISIETYLKKSYYKTASLIANSSKAAALLSDASPETAENLYDYGRHLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ + +GK G D ++G T PV+ A E + +G +L++A Sbjct: 218 LDFTSTTDTLGKPAGSDLKSGNLTAPVLFALGEKPDLEALIERKFEQEG-----DLEQAL 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++++++ + A + + A D L+ + S +++L+ + D+ L RL Sbjct: 273 ELIQDSQGIQQARELAAYHAKLAVDHLQVIAPSESREALINIADYVLSRL 322 >gi|305665579|ref|YP_003861866.1| putative isoprenoid biosynthesis related protein [Maribacter sp. HTCC2170] gi|88710335|gb|EAR02567.1| putative isoprenoid biosynthesis related protein [Maribacter sp. HTCC2170] Length = 334 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 96/285 (33%), Positives = 148/285 (51%), Gaps = 10/285 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y++ GGKRLRP+LTL T + N + A AIE H +L+HDD++DD+ LRRG Sbjct: 41 MSYILGLGGKRLRPVLTLMTTEVFGKDHINAMDAALAIEIFHNFSLVHDDIMDDAPLRRG 100 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQLSL 150 K W T +L GD +L +A+ + +S +E + S A + EG+ + Sbjct: 101 KPTVHEKWDLNTGILSGDAMLIRAYQLFENYESDTFRELAQLFSKTALEVCEGQQYDIDF 160 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DVT +YL +I+ KTAVL +AA+++ +IA ++ + + +G NLG+AFQL DD Sbjct: 161 ETREDVTVPEYLKMIEYKTAVLVAAAMKMGGIIANASSTDQDCIYDFGKNLGLAFQLQDD 220 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN----FWKSTINDGKISVEN 266 LD G+ GK +G D K T+ + A + G + +KN + D VE Sbjct: 221 YLDAFGDPKTFGKQVGGDIIENKKTVLYLAALENGDEEQKNELLDLYSIQPKDPSEKVEA 280 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 +K+ F A+ T+ + Y +KA L L S+ KK L+ Sbjct: 281 IKEMF---HSTGAVKHTKSQIEFYTKKAFGKLNSLDISNEKKELL 322 >gi|262382413|ref|ZP_06075550.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295291|gb|EEY83222.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 324 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/316 (30%), Positives = 163/316 (51%), Gaps = 14/316 (4%) Query: 19 ILKRICSDVEMIP---------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 IL+RI S++ + + ++Y++ GGKR+RP LTL + +N + A Sbjct: 7 ILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPAL 66 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E H TLLHDD++D++ RR K VW T++L GD +L A+ ++ T+ Sbjct: 67 GLEVFHNFTLLHDDLMDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHL 126 Query: 130 LEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L L T AE G+ + +DV+EE+Y+ +I+ KTAVL + +L+ +L+ G Sbjct: 127 KQVLDLFTQTAAEICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLACSLKTGALLGGA 186 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 L ++G+N+G+AFQL DD+LD G+ GKNIG D K T +I A + Sbjct: 187 SQEDASNLYAFGINIGLAFQLQDDLLDVYGDTATFGKNIGGDILCNKKTFLLINALRLAN 246 Query: 247 KREKNFWKSTINDGKISVENLKKAFI-IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 K + +S ++ + +AF I E + TE + +Y + ++L+ L + Sbjct: 247 KEQVETLRSWMDKKEFDPAQKIQAFTSIYNELQLKQLTENKIQAYYDASVENLKALQVAP 306 Query: 306 WKKSLM-EVVDFCLQR 320 K +++ EV D + R Sbjct: 307 EKLTILKEVCDHLMHR 322 >gi|154491788|ref|ZP_02031414.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC 43184] gi|154088029|gb|EDN87074.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC 43184] Length = 324 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 83/228 (36%), Positives = 126/228 (55%), Gaps = 6/228 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D ++Y++ GGKR+RP L L + + D V A +E H TLLHDD++DD+ R Sbjct: 29 DPIEYILSLGGKRIRPALVLMACNLYKENVDTAVNPALGLEVFHNFTLLHDDLMDDADKR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQL 148 R K VW T++L GD +L A+ ++ ET+S+ E L L T E G+ + Sbjct: 89 RNKPTVHKVWNANTAILSGDAMLIAAYQLIGETESESLKEILDLFTRTALEICGGQQYDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTEE+Y+ +I+ KTAVL + AL++ +++ + + L +G+N+G+AFQL Sbjct: 149 EFESRTDVTEEEYIEMIRLKTAVLLACALKMGAIMGNAPKADAETLYQFGINIGLAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFW 253 DD+LD G+ GKNIG D K T +I A + + +K N W Sbjct: 209 DDLLDVYGDTATFGKNIGGDILCNKKTFMLINALRLASNTQKAELNSW 256 >gi|148273991|ref|YP_001223552.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831921|emb|CAN02892.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 357 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 103/318 (32%), Positives = 155/318 (48%), Gaps = 34/318 (10%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 R DV + +YL+ +GGKR+RPML L A + E V A AIE H A+L H Sbjct: 53 RFADDVADV--TTRYLLAAGGKRVRPMLALLIAQLGEGNTQQVVDAAVAIEITHLASLYH 110 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-- 139 DDV+D++ +RRG +A+ VWGN ++L GD L ++A +V + + A+ L A T Sbjct: 111 DDVMDEADMRRGVPSAQAVWGNSVAILAGDLLFARASKIVADLGPR----AIRLQAATFE 166 Query: 140 -LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G+L + ++ E YL V+ KT L + A ++ + +G + A+ ++G Sbjct: 167 RLVLGQLHETIGPRDDQDPIEHYLDVLADKTGSLIACAAQMGVIYSGADPELESAVLAFG 226 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI----LA------------F 242 G+AFQLVDDVLD + E GK G D R G TLP++ LA Sbjct: 227 ERTGVAFQLVDDVLDLADQPEETGKLAGTDLRAGVATLPLLYLRRLAESDAAAASLLARI 286 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 QR E+ S +L A +R++ T A+ + +A D+L LP Sbjct: 287 QRDVAHEET---------PESEADLTAAIAELRDHEVTARTIAEAHRWAAEAVDALAPLP 337 Query: 303 DSSWKKSLMEVVDFCLQR 320 + KK+L D ++R Sbjct: 338 EGPVKKALTRFADTIVER 355 >gi|282901404|ref|ZP_06309329.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505] gi|281193683|gb|EFA68655.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505] Length = 323 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 91/290 (31%), Positives = 156/290 (53%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP + L + D H LA E IHTA+L+HDDVVD+S +R Sbjct: 38 EHLFGAGGKRIRPAIVLLISRATTLEEDISLGHRRLAEITEMIHTASLVHDDVVDESDIR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG ++GN+ +VL GDFL +Q+ + + E ++ LS V LA GE++Q Sbjct: 98 RGVPTVHSLFGNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLAAGEIQQGLNR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +++ E YL KTA L + + + + +++ V + L +YG +LG+AFQ+VDD+ Sbjct: 158 FDTNLSIETYLKKSYYKTASLIANSAKAAGILSNVSSESANNLYNYGKDLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ G ++ +GK D ++G T PV+ A + E + +G +L++A Sbjct: 218 LDFTGSMDTLGKPAASDLKSGNLTAPVLFALEEQPSLEVLIEREFAQEG-----DLEQAV 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++ +++ + A + AK + L S K++L+ + D+ L RL Sbjct: 273 KLISDSQGIPRARELANHHANLAKQHIADLGPSESKQALINMTDYVLSRL 322 >gi|293572766|ref|ZP_06683720.1| polyprenyl synthetase [Enterococcus faecium E980] gi|291607116|gb|EFF36484.1| polyprenyl synthetase [Enterococcus faecium E980] Length = 328 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 164/311 (52%), Gaps = 15/311 (4%) Query: 20 LKRICSDVEM----IPDVVKYLIFSGGKRLRPMLTLA-TALMLEYRGDNHVLLACAIEFI 74 LKR+ V + + +K I +GGK LRP L + E D + LA +IE + Sbjct: 21 LKRMEETVRLKNKPVEQAIKETIHAGGKLLRPAYQLLFSQFGPEQDRDKAIALAASIEML 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDD+VD++ LRRG+ R +GN SV GD+L C + + +L++L Sbjct: 81 HTATLIHDDIVDEADLRRGQPNIRSQFGNVVSVYAGDYLF--VCCFKLLSDYSTSLKSLQ 138 Query: 135 LVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L + ++ + GEL Q+ N +++ ++YL I KTA LF + V + +G Sbjct: 139 LNSRSMEKVLNGELGQMDDRYNYELSVKEYLENISGKTAELFQLSCSVGAFESGTSERFA 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + G+++G+AFQ++DD+LDY E E+GK + ED R G +LP+I + Q+ + Sbjct: 199 KKAGDIGLSIGMAFQIIDDILDYTKESQEIGKPVLEDMRQGVYSLPLIYSLQKNKQSLLP 258 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW--KKS 309 + + + VE ++K I+ + + + A +Y +KA ++ LPD+S +++ Sbjct: 259 YLEKKTEMTEEDVEAVRK---IVERTGGVGEAKKLAAAYTEKALKEIKKLPDTSLRTREN 315 Query: 310 LMEVVDFCLQR 320 L + L R Sbjct: 316 LFSLTQLILDR 326 >gi|256831793|ref|YP_003160520.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603] gi|256685324|gb|ACV08217.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603] Length = 336 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 94/299 (31%), Positives = 153/299 (51%), Gaps = 11/299 (3%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ + ++L +GGKRLRP+LTL A + + D+ A +E H A+L HDDV+D + Sbjct: 40 VVNEASQHLANAGGKRLRPLLTLLAAHVGQGVNDDVRQAALVVELTHLASLYHDDVMDSA 99 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGEL 145 LRRG +A VWGN ++L GD L ++A +V EA+ + A T L G+L Sbjct: 100 PLRRGAPSAHEVWGNSVAILTGDLLFARASRLVANLGP----EAVHIQAVTFERLCLGQL 155 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + ++ D E Y+ V+ KTA L + + + + AG + ++QAL YG N+G+AF Sbjct: 156 HETMGVRDGDDPVEHYIGVLADKTASLLATSALLGAKFAGADHGIQQALARYGENVGVAF 215 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL----AFQRGTKREKNFWKSTINDGK 261 QL DD++D + + GK G D R PT+PV+L ++ + I+ Sbjct: 216 QLADDIIDLTSDGDVTGKTQGTDLREQVPTMPVLLLRAQVLSGHASQDDRDLLALIDSDL 275 Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 L A +R +R + T RA +Y +A L LP+ +++L + ++R Sbjct: 276 SDDAALAAAVEQLRAHRVIELTRQRASAYADQAVRELDSLPEGPVRQALQDFAHILVER 334 >gi|256839153|ref|ZP_05544663.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256740072|gb|EEU53396.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 324 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 97/316 (30%), Positives = 162/316 (51%), Gaps = 14/316 (4%) Query: 19 ILKRICSDVEMIP---------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 IL+RI S++ + + ++Y++ GGKR+RP LTL + +N + A Sbjct: 7 ILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPAL 66 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E H TLLHDD++D++ RR K VW T++L GD +L A+ ++ T+ Sbjct: 67 GLEVFHNFTLLHDDLMDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHL 126 Query: 130 LEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L L T AE G+ + +DV EE+Y+ +I+ KTAVL + +L+ +L+ G Sbjct: 127 KQVLDLFTQTAAEICGGQQFDMEFESRMDVNEEEYIEMIRLKTAVLLACSLKTGALLGGA 186 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 L ++G+N+G+AFQL DD+LD G+ GKNIG D K T +I A + Sbjct: 187 SQEDAGNLYAFGINIGLAFQLQDDLLDVYGDTATFGKNIGGDILCNKKTFLLINALRLAN 246 Query: 247 KREKNFWKSTINDGKISVENLKKAFI-IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 K + +S ++ + +AF I E + TE + +Y + ++L+ L + Sbjct: 247 KEQAEALRSWMDKKEFDPAQKIQAFTSIYNELQLKQLTENKIQAYYDASVENLKALQVAP 306 Query: 306 WKKSLM-EVVDFCLQR 320 K +++ EV D + R Sbjct: 307 EKLTILKEVCDHLMHR 322 >gi|228914189|ref|ZP_04077805.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845393|gb|EEM90428.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 305 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 12/304 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 8 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 67 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 68 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 127 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 128 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANCDTVSRLFWYGYF 187 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG--TKREKNFWKSTIN 258 +G+++Q++DD+LD+ ++GK G D G TLP + A + K+ ++ ++T Sbjct: 188 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPILCKKIRSVHENTTA 247 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDF 316 D K I +N A +D + A+S Y KA + ++ LP K +L V + Sbjct: 248 DE-------MKEIIEAVKNSAAIDKAF-AFSERYLHKALEMIKPLPRGQAKYALQNVAKY 299 Query: 317 CLQR 320 +R Sbjct: 300 IGKR 303 >gi|309790120|ref|ZP_07684693.1| polyprenyl synthetase [Oscillochloris trichoides DG6] gi|308227845|gb|EFO81500.1| polyprenyl synthetase [Oscillochloris trichoides DG6] Length = 358 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 159/311 (51%), Gaps = 5/311 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ V L++ R S +I + + + SGGKRLR + L A + Y+ + + A + Sbjct: 50 DLRAVEDLLIARSQSRSSLITEAGVHTVRSGGKRLRAAMALLAAQLGTYQLSHVIHAAAS 109 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 E IH A+L+HDD+VD +A RRG+V W N +++VGD+ + A + + + Sbjct: 110 AELIHAASLVHDDLVDQAARRRGRVTVHARWDNDVALMVGDYFFALASAEMSLSPDPRII 169 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + + EGEL + +++ + Y + +KTAVLF AA + G + Sbjct: 170 TFYAQAVQVIVEGELSPVMVAEPAETARRQYFYKTGAKTAVLFEAACKAGMAAGGGDEAQ 229 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-GTKRE 249 AL YG ++G+AFQ+VDDVLD+ G + +GK G D R G TLP+I A +R G+ R Sbjct: 230 IAALAGYGFDVGVAFQIVDDVLDFIGNESTLGKPAGNDLRQGTITLPLIYALERTGSPRL 289 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + + D ++E + + A +D R Y +A + L PDS +++ Sbjct: 290 RALVEQHLTD-DATIEAAIREVLEAGGAAAAMDEARR---YVDQAINHLNIFPDSLARRT 345 Query: 310 LMEVVDFCLQR 320 L+ + F L+R Sbjct: 346 LITLAQFVLER 356 >gi|33865545|ref|NP_897104.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. WH 8102] gi|33632714|emb|CAE07526.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. WH 8102] Length = 323 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 153/292 (52%), Gaps = 8/292 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L G H LA E IHTA+L+HDDVVD+++ Sbjct: 36 AAEHLFSAGGKRLRPGIVLLLSRALSADGQLTPRHRRLAEITEMIHTASLVHDDVVDEAS 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + + +VL GDFL +QA + E ++ LS V LA+GE++Q Sbjct: 96 TRRGVDTVHSRFDARVAVLAGDFLFAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E YL KTA L + + + +++ S L +G LG+AFQ+VD Sbjct: 156 FRFDTAQSFETYLEKSYCKTASLIANSARAAGVLSDCSPSELDGLYRFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T P A + E+ ++ I +L + Sbjct: 216 DILDFTGSDQQLGKPAASDLASGYLTAPTFYAME-----EQPGLQALIAREFAEPGDLDQ 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++R +RA+ T A ++ ++++D++ + DS K++L+E+ DF L RL Sbjct: 271 ALEMVRSSRAIPRTRELAETFARESRDAISWMSDSPCKRALLELPDFVLSRL 322 >gi|326203183|ref|ZP_08193049.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] gi|325986829|gb|EGD47659.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] Length = 318 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 92/308 (29%), Positives = 155/308 (50%), Gaps = 7/308 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+EKV + + S +++ + + +GGKRLRP + +A++ + R D + LA A Sbjct: 11 DIEKVEENLRTNVTSKNQLLVKAIADTVGAGGKRLRPAMVIASSYFGKIRQDRLIKLASA 70 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +HTATL+HDDV+D S RR + +G ++ GDFL ++A M+ + + L Sbjct: 71 IELLHTATLVHDDVLDYSPFRRNRETVYKKYGTDMAIYCGDFLYTKALLMLADIVPAKHL 130 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + T+ EGE+ Q ++++ YL I KTAVLF A+ + +L A +S+ Sbjct: 131 TIAAKAVKTICEGEVDQYRDKYVMNLSVPSYLKRISRKTAVLFGASCALGALCAKCNHSI 190 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT---K 247 +L G G+ FQ++DD DY+ +E GK + D G TLP I A + + Sbjct: 191 TNSLSKLGFYYGVMFQMIDDYRDYKSGDSEWGKPVFNDLSKGILTLPGIYACKNNKEIYQ 250 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + +N+W+ + S E L+ + + + TE Y QKA + LP S + Sbjct: 251 KVENYWRKE----EKSNEELQDIISQIYSSGGMEYTENYIQRYRQKAFREIEKLPKSEAR 306 Query: 308 KSLMEVVD 315 ++++ Sbjct: 307 DIFADLIN 314 >gi|297171036|gb|ADI22050.1| geranylgeranyl pyrophosphate synthase [uncultured myxobacterium HF0200_05J13] Length = 339 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 96/286 (33%), Positives = 143/286 (50%), Gaps = 1/286 (0%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHV-LLACAIEFIHTATLLHDDVVDDSALRRGK 94 +L+ GKR+RP+ + A + V LA A E +H+ATLLHDDV+D+ + RRG Sbjct: 52 HLLGLPGKRVRPLCVVLAARAGGAPFNEAVKQLAIACELVHSATLLHDDVLDEGSERRGA 111 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 VAARL +GN SVL GD+LL A V +T L L V + + E+ QL Sbjct: 112 VAARLAYGNSASVLGGDYLLVDALRRVYKTGEHGLLSDLMDVIDGMVKAEVAQLERRGKF 171 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 D + YL +I KTA +F L + G+ Q L YG +G+AFQ+VDD+LD Sbjct: 172 DADRDAYLEIIYGKTAAIFEWGLRAGGIAGGLSEEAAQGLGKYGAAIGMAFQVVDDILDL 231 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274 GE +GK+ D + GK T P+I+A +R E + + K + Sbjct: 232 AGESEVIGKDSLVDIKEGKLTWPLIIACEREPSIEVCLREIACTPEALDETYAKSLRQRI 291 Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + AL + RA ++A+ +L +P S + +L V++ + R Sbjct: 292 LDTGALDEARRRARLCAEQAQQALDSVPASKSRDALSTVIEAVVNR 337 >gi|240273961|gb|EER37480.1| decaprenyl-diphosphate synthase subunit 1 [Ajellomyces capsulatus H143] Length = 414 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 95/263 (36%), Positives = 138/263 (52%), Gaps = 12/263 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A + + Sbjct: 122 LAEITELIHTASLLHDDVIDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVALARLRD 181 Query: 127 QEALEALSLVACTLAEGELRQLSLSK----NLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E LS V L EGE QL ++ N TE+ YL K+A L S + Sbjct: 182 PEVIELLSTVIANLIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLISKSCRA 241 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ + +A SYG NLG+AFQLVDD+LDY +E+GK G D G T P++ Sbjct: 242 AALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTISGDELGKPAGADLELGLATAPLL 301 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ + + +G + + A I+ ++ L T A Y KA S+R Sbjct: 302 FAWRANPELGALVGRKFSGEGDVQL-----ARQIVSQSDGLEQTRALAQEYTNKAIQSIR 356 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 LPD+ K L+E+ +R N Sbjct: 357 ILPDTEAKTGLIEMCAKLTKRRN 379 >gi|312141024|ref|YP_004008360.1| polyprenyl synthetase [Rhodococcus equi 103S] gi|325675339|ref|ZP_08155023.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707] gi|311890363|emb|CBH49681.1| polyprenyl synthetase [Rhodococcus equi 103S] gi|325553310|gb|EGD22988.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707] Length = 342 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 93/329 (28%), Positives = 162/329 (49%), Gaps = 17/329 (5%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + L D + +V L++ + + + + +L +GGKR RP+ T+ TA + Sbjct: 23 QQLADAVRDGLARVEELLVSELSDGEDFLTEAALHLAKAGGKRFRPLFTVLTAQLGPEGS 82 Query: 62 DNHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D V+ A + E +H ATL HDDV+D++A+RRG +A WGN ++L GD+L + A + Sbjct: 83 DPAVVTAATVVELVHLATLYHDDVMDEAAMRRGAPSANARWGNSIAILAGDYLFAHASRL 142 Query: 121 VIETKSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 V S EA+ ++A T AE G++R+ ++ E YL V+ KT L +A+ Sbjct: 143 V----STLGPEAVRIIAETFAELVTGQMRETIGAREKQDPVEHYLKVVWEKTGSLIAASG 198 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +G L+ G +G AFQ+ DD++D + GK G D R G TLP Sbjct: 199 RFGGTFSGADADQIARLERLGDAVGTAFQIADDIIDISSASEQSGKTPGTDLREGVHTLP 258 Query: 238 VILAFQRGTKREKNFWKSTIN---DGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQK 293 V+ A RE+ + DG ++ + ++ +A ++ + + + + Y + Sbjct: 259 VLYAL-----REEGADADRLRVLLDGPVTEDADVAEALALLERSPGMAAAKAKLGEYADR 313 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 A+ L LP +L+ +VD+ ++R+ Sbjct: 314 ARAELAQLPQGPANDALVRLVDYTVERVG 342 >gi|116074594|ref|ZP_01471855.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. RS9916] gi|116067816|gb|EAU73569.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. RS9916] Length = 323 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 92/292 (31%), Positives = 156/292 (53%), Gaps = 8/292 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGK++RP + L + L G+ H LA E IHTA+L+HDDVVD++A Sbjct: 36 AAEHLFSAGGKKIRPGIVLLVSRALSPEGELTARHRRLAEITEMIHTASLVHDDVVDEAA 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + ++ +VL GDFL +QA + E ++ LS V LA+GE++Q Sbjct: 96 TRRGVATVHSRFNHRVAVLAGDFLFAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E YL KTA L + + + +++ +L +G LG+AFQ+VD Sbjct: 156 FRYDTGQSFETYLEKSYCKTASLIANSARAAGVLSEQTPDRLDSLYRFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T P + A + EK S I +L++ Sbjct: 216 DILDFTGSDQQLGKPAASDLASGYLTAPALYALE-----EKPALGSLIEREFSEEGDLQQ 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++R + A+ + A ++ ++A++SL LP+S +++L+++ +F L RL Sbjct: 271 ALELVRASDAIQRSRALAETFAREARESLEWLPESPCRRALLDLPEFVLSRL 322 >gi|257888791|ref|ZP_05668444.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,141,733] gi|257824845|gb|EEV51777.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,141,733] Length = 328 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 164/311 (52%), Gaps = 15/311 (4%) Query: 20 LKRICSDVEM----IPDVVKYLIFSGGKRLRPMLTLA-TALMLEYRGDNHVLLACAIEFI 74 LKR+ V + + +K I +GGK LRP L + E D + LA +IE + Sbjct: 21 LKRMEETVRLKNKPVEQAIKETIHAGGKLLRPAYQLLFSQFGPEQDRDKAIALAASIEML 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDD+VD++ LRRG+ R +GN SV GD+L C + + +L++L Sbjct: 81 HTATLIHDDIVDEADLRRGQPNIRSQFGNVVSVYAGDYLF--VCCFKLLSDYSTSLKSLQ 138 Query: 135 LVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L + ++ + GEL Q+ N +++ ++YL I KTA LF + V + +G Sbjct: 139 LNSRSMEKVLNGELGQMDDRYNYELSVKEYLENISGKTAELFQLSCSVGAFESGTSERFA 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + G+++G+AFQ++DD+LDY E E+GK + ED R G +LP+I + Q+ + Sbjct: 199 KKAGDIGLSIGMAFQIIDDILDYTKESQEIGKPVLEDMRQGVYSLPLIYSLQKNKQSLLP 258 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW--KKS 309 + + + +E ++K I+ + + + A +Y +KA ++ LPD+S +++ Sbjct: 259 YLEKKTEMTEEDIEAVRK---IVERTGGVGEAKKLAAAYTEKALKEIKKLPDTSLRTREN 315 Query: 310 LMEVVDFCLQR 320 L + L R Sbjct: 316 LFSLTQLILDR 326 >gi|169779988|ref|XP_001824458.1| hexaprenyl pyrophosphate synthase [Aspergillus oryzae RIB40] gi|238505986|ref|XP_002384195.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus flavus NRRL3357] gi|83773198|dbj|BAE63325.1| unnamed protein product [Aspergillus oryzae] gi|220690309|gb|EED46659.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus flavus NRRL3357] Length = 451 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 17/288 (5%) Query: 45 LRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 L P+++ + ++ GD ++L LA E IHTA+LLHDDV+D++ RR +A L Sbjct: 167 LNPLVSSSAEAKYDFAGDENILPTQRRLAEITELIHTASLLHDDVIDNAVTRRSSSSANL 226 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL----SLSKNLD 155 +GN+ +VL GDFLL +A + + E E L+ V L EGE QL S KN Sbjct: 227 QFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANLVEGEFMQLKNTASDEKNPV 286 Query: 156 VTEED---YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 T+E YL KTA L S + ++L+ V +A +YG NLG+AFQLVDD+L Sbjct: 287 FTDETISYYLQKTYLKTASLISKSCRAAALLGDSTPQVVEAAYAYGRNLGLAFQLVDDML 346 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E+GK G D G T P++ A+++ + + +G ++++A Sbjct: 347 DYTVSDAELGKPSGADLELGLATAPLLFAWKQNPELGPLVGRKFSREG-----DVQRARE 401 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ ++ + T A Y KAK ++ PDS K L+++ + + R Sbjct: 402 LVYQSNGVEKTRVLAQEYADKAKAAISSFPDSEAKDGLLQMCEKTMNR 449 >gi|326777699|ref|ZP_08236964.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus XylebKG-1] gi|326658032|gb|EGE42878.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus XylebKG-1] Length = 342 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 169/327 (51%), Gaps = 20/327 (6%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYR 60 LE L+ +E+V +L+ C+ P +V +LI +GGKRLRP+LTL A + R Sbjct: 24 LERRVLRGLEQVETRLLE--CAGEAEDPRLAEVAGHLIAAGGKRLRPLLTLLGAEFGDVR 81 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ V A E IHTA+L HDDV+D++ LR G + WGN +V G++LL++A Sbjct: 82 GEGGVEAAVVAELIHTASLHHDDVMDEALLRHGVSSVNARWGNTVAVRSGNWLLARA-AR 140 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + + EA+ + + L G+LR+L + Y VI K+A L S +L + Sbjct: 141 LSASLAPEAIPLQAEASERLVRGQLRELVGPDGAERRLSHYFAVISDKSASLISLSLRLG 200 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AG V +AL +YG +LG+AFQ+ DD+LD ++GK G+D G LPV+L Sbjct: 201 AVQAGAPAGVGEALAAYGEHLGVAFQISDDLLDITSSSADLGKEQGKDLAVGVAGLPVLL 260 Query: 241 AFQRGTKREKNFWKSTINDGK-ISVENLKKAFIIMREN------RALVDTEYRAYSYGQK 293 ++ +S +N + + + ++A +++ + R ++D A Sbjct: 261 VLDDAWPGDEEL-RSLLNGAQAMRGQQHERALALLQRSGCMARARGIMDERLAA------ 313 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A+ SL LP +K+L + +F R Sbjct: 314 ARASLGPLPPGPARKALESLCEFVATR 340 >gi|206970523|ref|ZP_03231475.1| heptaprenyl diphosphate synthase component II [Bacillus cereus AH1134] gi|206734159|gb|EDZ51329.1| heptaprenyl diphosphate synthase component II [Bacillus cereus AH1134] Length = 320 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 89/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N + YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYNYNQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRQK---ITSVHEN 259 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 260 STASE--IQEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGKAKYALQNVAKYIG 316 Query: 319 QR 320 +R Sbjct: 317 KR 318 >gi|320101826|ref|YP_004177417.1| polyprenyl synthetase [Isosphaera pallida ATCC 43644] gi|319749108|gb|ADV60868.1| Polyprenyl synthetase [Isosphaera pallida ATCC 43644] Length = 346 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 114/198 (57%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GKRLRP L L + +H +LA +E IHTATL+HDD++D+S +RR W Sbjct: 68 GKRLRPALVLLCGQAVGRLTPDHPVLAAVVEMIHTATLVHDDILDESLVRRHAATINAEW 127 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161 GN+T+VL+GD+L + AF + +S A + + EGE+ Q+ +LD+ E Y Sbjct: 128 GNETAVLLGDYLFTHAFHLAASLESTLACRWIGRATNLVCEGEMNQVHHRGDLDLDESTY 187 Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 L +I+ KTA L + + ++ + AG + L+ +G +LG AFQ+ DDVLD GE Sbjct: 188 LDIIQGKTAELIAVSCKLGAHYAGADVETTERLERFGRDLGSAFQIADDVLDLWGEERVA 247 Query: 222 GKNIGEDFRNGKPTLPVI 239 GK++G D K TLPVI Sbjct: 248 GKSLGTDLFKQKLTLPVI 265 >gi|296109469|ref|YP_003616418.1| Polyprenyl synthetase [Methanocaldococcus infernus ME] gi|295434283|gb|ADG13454.1| Polyprenyl synthetase [Methanocaldococcus infernus ME] Length = 317 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 93/294 (31%), Positives = 155/294 (52%), Gaps = 15/294 (5%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRG 93 K+L F+GGKR+RP L++ T L+ N +L A ++E IH TL+HDD++D+ LRRG Sbjct: 31 KHLTFAGGKRIRPYLSILT-YNLKKDNINEILPAAVSVELIHNYTLIHDDIMDNDELRRG 89 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSLVACTLAEGELRQLS 149 K + +G + ++L GD L ++AF + E K+ + L+ LS + EG+ + Sbjct: 90 KPTVHIAYGEEMAILAGDLLYAKAFEAIGNIKDEKKAYKVLKVLSKACVDVCEGQAMDME 149 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 EE YL +IK KT L A+ E+ ++A +A+KSY +G+ FQ+ D Sbjct: 150 FESYWPTLEE-YLEMIKKKTGALLEASAEIGGIMAEFNEEEMKAIKSYAEKIGLTFQIQD 208 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD G+ ++GK +G D R GK T+ +I A + EK S + + K S E++++ Sbjct: 209 DILDIIGDEKKIGKPVGSDIREGKKTIIIIHAINTLNEEEKEKLLSILGNVK-SEEDIRE 267 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSSWKKSLMEVVDFCLQRL 321 A I+ + Y + +++++ L D +K L E+ F R+ Sbjct: 268 AIKILEPS-----INYAKELLNKLTEEAIKSLEIFDKYRRKELEELAKFIANRI 316 >gi|229160564|ref|ZP_04288559.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus R309803] gi|228622974|gb|EEK79805.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus R309803] Length = 320 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 91/303 (30%), Positives = 157/303 (51%), Gaps = 10/303 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ V + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECVTNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N D YL IK KTA+L +A+ ++ ++ +G L YG Sbjct: 143 CKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIASGANRETVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFWKSTI 257 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +T Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRKKITSVHENTTA 262 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 ++ K +E +K + I ++A +E Y KA + ++ LP K +L V + Sbjct: 263 DEMKEIMEAVKNSDAI---DKAFAFSE----RYLHKALEIIKPLPRGQAKYALQNVAKYI 315 Query: 318 LQR 320 +R Sbjct: 316 GKR 318 >gi|187736086|ref|YP_001878198.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835] gi|187426138|gb|ACD05417.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 336 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 98/317 (30%), Positives = 155/317 (48%), Gaps = 25/317 (7%) Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 F+ + C D E + D ++ + S GK LRP L L A H+ L +E +H Sbjct: 29 FVEAQSSCFDPE-VADYMETVCQSKGKMLRPALVLLVAGATGGIKPAHIRLGALLEMVHL 87 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+L+HDDV+D++ RR + A +WGN +VL+GD L S A + E S E L+ Sbjct: 88 ASLVHDDVIDEADKRRDEATANALWGNSLAVLLGDVLFSHAMVLGTEFGSTEFCRRLANT 147 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + +GE+ Q S +L +T E+Y +I+ KTA LFSAA + I+GV V ++L Sbjct: 148 VRNVCQGEVAQSSRLYDLSMTREEYFEIIRKKTASLFSAATGGAGWISGVTPEVEESLYQ 207 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK-- 254 G LG+A+Q+ DD LD G+ ++ GK + D GK TLP+ + G + + + Sbjct: 208 LGDLLGVAYQIYDDCLDMVGDEDDAGKTLHTDATKGKLTLPIFNLLECGDRNVEATLRDA 267 Query: 255 ---------STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 S D + E L KA + E + A++ L LP + Sbjct: 268 IENREVVDYSAFQDNPVFAEALDKAIQVALEKN-------------EAAREILWLLPQTE 314 Query: 306 WKKSLMEVVDFCLQRLN 322 ++++L E+ + + LN Sbjct: 315 YREALAEMTFYMDELLN 331 >gi|228951990|ref|ZP_04114087.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807715|gb|EEM54237.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 305 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 89/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 8 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 67 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 68 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 127 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N + YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 128 CKGEIEQIKDKYNYNQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYF 187 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+++Q++DD+LD+ ++GK G D G TLP + A + R+K +++++ Sbjct: 188 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLRQK---ITSVHEN 244 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + E + I +N +D + A+S Y KA + ++ LP K +L V + Sbjct: 245 STASE--IQEIIDAVKNSTAIDQAF-AFSERYLHKALEIIKPLPRGKAKYALQNVAKYIG 301 Query: 319 QR 320 +R Sbjct: 302 KR 303 >gi|195039199|ref|XP_001990881.1| GH19601 [Drosophila grimshawi] gi|193895077|gb|EDV93943.1| GH19601 [Drosophila grimshawi] Length = 449 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 94/299 (31%), Positives = 153/299 (51%), Gaps = 14/299 (4%) Query: 32 DVVKYLIFSG-GKRLRPMLTLATALMLEYRGDN--HVL------LACAIEFIHTATLLHD 82 D + F G GK LRPM+TL A L Y +N H L +A E +H+A+L+HD Sbjct: 155 DTIACYYFDGQGKALRPMVTLLMAKALNYHLNNESHQLVHKQRQIALFSEMVHSASLVHD 214 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D S RRGK + +W ++ + GD++LS A M+ +S + LS + L + Sbjct: 215 DVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMISRLRSDDVTIVLSQILTDLVQ 274 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE QL + + YL KTA L + AL+ +++IA ++V + YG N+G Sbjct: 275 GEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIG 334 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQLVDD+LD+ +MGK D + G T PV+ A ++ + + G Sbjct: 335 LAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELNPMVMRRFSEPG-- 392 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++++AF ++ ++ L T + A + +A + L +S ++K L V D + R+ Sbjct: 393 ---DVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKGLQVVADLVINRM 448 >gi|332881619|ref|ZP_08449267.1| putative octaprenyl pyrophosphate synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680258|gb|EGJ53207.1| putative octaprenyl pyrophosphate synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 323 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 92/293 (31%), Positives = 161/293 (54%), Gaps = 10/293 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +++++ GK +RP+LTL A D+ + A ++E +HTA+L+HDDVVD+S +RRG Sbjct: 37 LRHVLSRKGKLMRPILTLLAAKKYGEINDSVLHAAVSLEMLHTASLVHDDVVDESGVRRG 96 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 + + + N+ +VLVGD+LLS A ++ ++ + TL++GEL+QLS K+ Sbjct: 97 QSSVNALLDNKAAVLVGDYLLSTALKHAAMAGDLRVVDLVARLGQTLSDGELQQLSNVKS 156 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 +++E Y +VI+ KTA LF+ EV +L++G + L +G +GI FQ+ DDV D Sbjct: 157 DEISENQYFNVIRRKTASLFAVCAEVGALLSGASEDEIRRLGEFGTYVGICFQIRDDVFD 216 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA-FQRGTKREKNFWKST---INDGKISVENLKK 269 Y E+GK G D + GK TLPV+ A Q G + W T + G+ + E + Sbjct: 217 YYDA--EVGKPTGNDMKEGKLTLPVVHAVLQPGAET----WHETALKVRAGRATEEEISA 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +++ + + + ++A + + + ++L +DF L+R++ Sbjct: 271 LVDFTKQSGGIEYARRKMDEFREQAIGLIGSDGNEAVGEALRLYLDFVLKRVS 323 >gi|159903572|ref|YP_001550916.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9211] gi|159888748|gb|ABX08962.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9211] Length = 323 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 91/290 (31%), Positives = 155/290 (53%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP + L + L G+ H LA E IHTA+L+HDDVVD+++ R Sbjct: 38 EHLFSAGGKRIRPGIVLLLSRALSVDGELSSRHRRLAEITEMIHTASLVHDDVVDEASTR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG + ++ +VL GDFL +QA + + + ++ LS V LA+GE++Q Sbjct: 98 RGVPTVHSRFNHRVAVLAGDFLFAQASWHLANLNNLDVVKLLSRVIMDLADGEIKQGLYR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + + YL KTA L + + + ++ + +L +G LG+AFQ+VDD+ Sbjct: 158 FDAGQSFSTYLEKSYCKTASLIANSSQAVGVLNDLPKEKLNSLYHFGKQLGLAFQVVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ G ++GK D +G T PV A + E + + G +L+ A Sbjct: 218 LDFTGNDKQLGKPAASDMASGYITAPVFYAIEENPSLEALIVREFSSQG-----DLENAL 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 I+R ++A+ + + A S +++ ++L LPDS +++L+E+ +F L RL Sbjct: 273 EIVRNSKAIARSRHLAESLAKESHEALNWLPDSPSQQALLELPNFVLSRL 322 >gi|198274095|ref|ZP_03206627.1| hypothetical protein BACPLE_00232 [Bacteroides plebeius DSM 17135] gi|198273173|gb|EDY97442.1| hypothetical protein BACPLE_00232 [Bacteroides plebeius DSM 17135] Length = 326 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 163/313 (52%), Gaps = 5/313 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 K++E+ L + S ++ +V+ Y+ GK +RP+L + TA + ++ A Sbjct: 15 KELEEFRGLFEDSLTSTDPLLGEVLAYIKKRSGKMMRPILVMLTAKLFGTLNESTFHAAL 74 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 ++E +HTA+L+HDDVVD+S RRG+ + ++ N+ SVLVGD++L+ + T E Sbjct: 75 SLELLHTASLVHDDVVDESDKRRGQSSVNAIYNNKVSVLVGDYMLATSLKHAALTGKVEL 134 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQN 188 +E ++ + L+EGE+ QL D +EE Y VI+ KTA LF A+ + ++ G VQ Sbjct: 135 VELVATLGQELSEGEILQLGNIGKEDFSEEAYFDVIRKKTAALFKASSQSGAVSVGAVQE 194 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 V +A G +GIAFQ+ DD+ DY E E+GK G D GK TLP + + Sbjct: 195 EVMKA-GLLGEMIGIAFQIKDDIFDYF-ESPELGKPTGNDMLEGKLTLPALYVLNQTGDD 252 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWK 307 I + S E + AF+ + R ++ R Y + KA + DS K Sbjct: 253 SLKQTALKIRSLEASKEEI-AAFVETVKERGGIEYATRIMYEFRDKALALVPASADSCLK 311 Query: 308 KSLMEVVDFCLQR 320 ++L +D+ ++R Sbjct: 312 EALTAYIDYVIER 324 >gi|119714798|ref|YP_921763.1| trans-hexaprenyltranstransferase [Nocardioides sp. JS614] gi|119535459|gb|ABL80076.1| Trans-hexaprenyltranstransferase [Nocardioides sp. JS614] Length = 334 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 95/317 (29%), Positives = 145/317 (45%), Gaps = 10/317 (3%) Query: 9 LKD-MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVL 66 L+D M V + + S + + +L+ +GGKR RP+L L A E+ D + Sbjct: 21 LRDRMAAVEVALAGHVVSRAGFVSETASHLMAAGGKRFRPLLVLLAAETGEHPDADEVIT 80 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 AC +E H A+L HDDV+D++ LRRG V+A W N ++L GDFL S++ + E Sbjct: 81 AACVVELTHLASLYHDDVMDEAELRRGAVSANARWDNHVAILTGDFLFSKSSELTAEL-G 139 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +A+ + L EG++ + + YL V+ KT L + + + G Sbjct: 140 PDAVRVQARTFTRLVEGQILETVQPGPGEDPLAHYLDVVAGKTGSLIATSAHYGARFGGA 199 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA---FQ 243 V +AL +YG +G AFQL DD+LD + E GK G D R G PTLPV++A Sbjct: 200 SREVEEALTAYGEIVGSAFQLSDDILDIASDSGESGKTPGTDLREGVPTLPVLMARASTD 259 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 R + D E L+ ++R + AL + +AK L +P Sbjct: 260 PADARLLELLGGDLTDDDRHAEALR----LLRAHPALGQARDYVIARAHEAKAHLAVVPP 315 Query: 304 SSWKKSLMEVVDFCLQR 320 + +L D R Sbjct: 316 GPVRDALEAFADLVAVR 332 >gi|189464891|ref|ZP_03013676.1| hypothetical protein BACINT_01235 [Bacteroides intestinalis DSM 17393] gi|189437165|gb|EDV06150.1| hypothetical protein BACINT_01235 [Bacteroides intestinalis DSM 17393] Length = 324 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 81/253 (32%), Positives = 139/253 (54%), Gaps = 1/253 (0%) Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A ++E +HTA+L+HDDVVD+S RRG+++ ++ N+ +VLVGD+LL+ + V +T + Sbjct: 71 AVSLELLHTASLVHDDVVDESTERRGQLSVNAIYNNKVAVLVGDYLLATSLVQVGKTHNY 130 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E +S + L+EGEL QLS +L +EE Y VI+ KTAVLF+A + +L GV Sbjct: 131 AIIEVVSRLGQNLSEGELLQLSNVSSLQFSEEVYFDVIRKKTAVLFAACTKSGALSVGVT 190 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + + +G +G+ FQ+ DD+ DY + ++GK G D GK TLPV+ A Sbjct: 191 DEQAEFARQFGEYIGLCFQIKDDIFDYY-DSKKIGKPTGNDMLEGKLTLPVLYALNSTKD 249 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + G + + + ++ + ++ +KA L LPD+ K Sbjct: 250 KAAEEIAVKVKSGSATTDEIDYLIEFAKQQGGIEYAVQTMLAFKEKALSLLLTLPDTDVK 309 Query: 308 KSLMEVVDFCLQR 320 +L+ +++ + R Sbjct: 310 TALVAYLNYVVDR 322 >gi|24651612|ref|NP_733425.1| CG31005 [Drosophila melanogaster] gi|23172761|gb|AAF57135.2| CG31005 [Drosophila melanogaster] gi|201065485|gb|ACH92152.1| FI02023p [Drosophila melanogaster] Length = 436 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 96/312 (30%), Positives = 159/312 (50%), Gaps = 16/312 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSG-GKRLRPMLTLATALMLEYRGDN--HVL------LAC 69 +LK S E+ D + F G GK LRPM+T+ A + Y +N H L +A Sbjct: 131 LLKSGTSQPEL--DTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIAL 188 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS A M+ +S + Sbjct: 189 FSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 248 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 LS + L +GE QL + + YL KTA L + AL+ +++IA ++ Sbjct: 249 TIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDN 308 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V + YG N+G+AFQLVDD+LD+ +MGK D + G T PV+ A ++ + Sbjct: 309 VAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELN 368 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + G ++++AF ++ ++ L T + A + +A + L +S ++K Sbjct: 369 PMVMRRFSEPG-----DVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKG 423 Query: 310 LMEVVDFCLQRL 321 L V D + R+ Sbjct: 424 LQVVADLVINRM 435 >gi|116671675|ref|YP_832608.1| trans-hexaprenyltranstransferase [Arthrobacter sp. FB24] gi|116611784|gb|ABK04508.1| Trans-hexaprenyltranstransferase [Arthrobacter sp. FB24] Length = 367 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 152/292 (52%), Gaps = 17/292 (5%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 ++L+ +GGKR+RP+L L A + + V A +E H ATL HDDV+D + RRG Sbjct: 79 RHLVEAGGKRIRPLLALLCAHLGDASRPAVVQAAVVVELTHLATLYHDDVMDSAPFRRGA 138 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLS 151 A VWGN +VL GD + ++A +V E S+ AL + A T L G+L + Sbjct: 139 PTAHEVWGNSVAVLTGDLIFARASILVSELGSR----ALGIQARTFERLCLGQLHETVGP 194 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + + E YL VI KT L +A+ ++ ++ AG + L YG +G+AFQL DDV Sbjct: 195 RPDEDPVEHYLSVIADKTGSLVAASGQLGAIFAGADEAYEPLLVEYGEKIGVAFQLADDV 254 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVIL---AFQRGTKREKNFWKSTINDGKISV-ENL 267 +D G + GK+ G D R G PTLPV+L A G + K + DG +S E L Sbjct: 255 IDVTGIKVKSGKSPGTDLREGVPTLPVLLLRNAAADGDQSAVELLK--LIDGDLSSDEAL 312 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL----MEVVD 315 A +R++R ++ A ++ +A +L LP+ K SL + VVD Sbjct: 313 AAAVAGLRDHRVTAESWVVARAWADEAIAALAPLPEGVVKSSLTSFALAVVD 364 >gi|167043490|gb|ABZ08187.1| putative Polyprenyl synthetase [uncultured marine microorganism HF4000_APKG2H5] Length = 575 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 92/302 (30%), Positives = 151/302 (50%), Gaps = 10/302 (3%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + +L GGKRLR ++ + D H L +IE IH TL+HDD++D Sbjct: 277 ERLHGAMTHLFAGGGKRLRAIIPRLVGEAVGEAHDGHYTLGASIEIIHNFTLVHDDIIDQ 336 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL------- 140 +RRG A + + + T++ GD +L+ F ++ E+ +A + L+ + T+ Sbjct: 337 DPIRRGLDAVHVAYDDATAINAGDAMLAVGFEILAESPEIDA-DKLAFLVSTIGEMVRKV 395 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 AEG+ + + VTEEDY+ +I KT+ +F +++AG + + + +G+N Sbjct: 396 AEGQQDDIEFEQRNTVTEEDYIAMITGKTSAMFETCATTGAILAGASDEIVDNMAIWGLN 455 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 LG+ FQL+DD++D G+ +GK G D GK TL I A G NF + G Sbjct: 456 LGLCFQLMDDLIDITGDTETLGKPAGSDVVQGKRTLIAIHALASGLDL-PNF-RQVYGAG 513 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 S ++L A ++E+ + RA + A SL L D+ + L E+ DF L R Sbjct: 514 NCSDDDLAAAIRELQESGSTAYARDRAMHHHSLAHRSLELLDDNPAVQVLKELTDFQLIR 573 Query: 321 LN 322 +N Sbjct: 574 IN 575 >gi|194904996|ref|XP_001981099.1| GG11874 [Drosophila erecta] gi|190655737|gb|EDV52969.1| GG11874 [Drosophila erecta] Length = 436 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 96/312 (30%), Positives = 159/312 (50%), Gaps = 16/312 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSG-GKRLRPMLTLATALMLEYRGDN--HVL------LAC 69 +LK S E+ D + F G GK LRPM+T+ A + Y +N H L +A Sbjct: 131 LLKSGTSQPEL--DTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIAL 188 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS A M+ +S + Sbjct: 189 FSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 248 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 LS + L +GE QL + + YL KTA L + AL+ +++IA ++ Sbjct: 249 TIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDN 308 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V + YG N+G+AFQLVDD+LD+ +MGK D + G T PV+ A ++ + Sbjct: 309 VAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELN 368 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + G ++++AF ++ ++ L T + A + +A + L +S ++K Sbjct: 369 PMVMRRFSEPG-----DVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKG 423 Query: 310 LMEVVDFCLQRL 321 L V D + R+ Sbjct: 424 LQVVADLVINRM 435 >gi|198450324|ref|XP_001357936.2| GA15930 [Drosophila pseudoobscura pseudoobscura] gi|198130986|gb|EAL27072.2| GA15930 [Drosophila pseudoobscura pseudoobscura] Length = 445 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 153/299 (51%), Gaps = 14/299 (4%) Query: 32 DVVKYLIFSG-GKRLRPMLTLATALMLEYRGDN--HVLL------ACAIEFIHTATLLHD 82 D + F G GK LRPM+T+ A + Y +N H L+ A E +H+A+L+HD Sbjct: 151 DTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQVALFSEMVHSASLVHD 210 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D S RRGK + +W ++ + GD++LS A M+ +S + LS + L + Sbjct: 211 DVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIVLSQILTDLVQ 270 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE QL + + YL KTA L + AL+ +++IA ++V + YG N+G Sbjct: 271 GEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIG 330 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQLVDD+LD+ +MGK D + G T PV+ A ++ + + G Sbjct: 331 LAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELNPMVMRRFSEPG-- 388 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++++AF ++ ++ L T + A + +A + L +S ++K L V D + RL Sbjct: 389 ---DVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKGLQVVADLVINRL 444 >gi|323705302|ref|ZP_08116877.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535204|gb|EGB24980.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 293 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 92/259 (35%), Positives = 147/259 (56%), Gaps = 21/259 (8%) Query: 3 MLEDLTLKDMEKVN-----FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 M +D+ + +E +N FL L E++ + +KY +F+GGKRLRP+L ++ ++ Sbjct: 1 MFDDILREKIEYINKGLNEFLSL---TDRPEVLFEAMKYSVFAGGKRLRPVLCISACELV 57 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 ++ + +ACAIEFIHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ Sbjct: 58 GGNKEDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLN 117 Query: 116 QAFCMVIE-----TKSQEALEALSLVA----C-TLAEGELRQLSLSKNLDVTEEDYLHVI 165 F ++I+ KSQ L+A +A C + G++ L LS+N ++ E D + Sbjct: 118 YGFEVLIQQALNSNKSQNILKAADEIARAAGCRGMIAGQVVDL-LSENKEIGEYDLKFMH 176 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KT L A++ ++I G + + L SY LG AFQ+ DD+LD +G+ ++GK+I Sbjct: 177 DHKTGALIKASILAGAIIGGADAATLKKLSSYAEYLGFAFQVKDDILDVQGDEAKLGKDI 236 Query: 226 GEDFRNGKPTLPVILAFQR 244 G D NGK T +L QR Sbjct: 237 GSDIANGKSTFVSVLGLQR 255 >gi|262198874|ref|YP_003270083.1| Geranyltranstransferase [Haliangium ochraceum DSM 14365] gi|262082221|gb|ACY18190.1| Geranyltranstransferase [Haliangium ochraceum DSM 14365] Length = 355 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 142/291 (48%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + +L+ GGK LRPM A M + LA A+E +HTATLLHDDVVD Sbjct: 63 VQKAAHHLLELGGKHLRPMCVALAAKMGTGFDAHGRQLAMAVELVHTATLLHDDVVDIGD 122 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG AR ++GN SV GD+LL A + +T + L+ + + + E QL Sbjct: 123 SRRGVPTARTIYGNAASVFAGDWLLVDALRRIRQTGLSDLLDRMLAIIEEMILAESLQLE 182 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 +L +EE Y V++ KTA LF A+ G+ AL+ YG +LG+AFQ+VD Sbjct: 183 RRGSLGDSEEVYFQVVEGKTAALFRWAMYAGGRAGGLDEDACLALERYGRHLGVAFQVVD 242 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G+ GK + D R GK T P+ILA +R ++ G + ++ Sbjct: 243 DLLDFSGDERFTGKGLFADLREGKSTYPLILALRRDEALRPLVEEALRGSGDLPETTVRA 302 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 M AL D+ A + A +L L D K +L+ V + + R Sbjct: 303 LLTSMERTEALADSRALAQEQVRLAVAALAPLADGPGKNALVTVAEATVYR 353 >gi|222480459|ref|YP_002566696.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239] gi|222453361|gb|ACM57626.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 348 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 164/314 (52%), Gaps = 23/314 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA--------LMLEYRG----DNHVL----LACAI 71 E + + +Y++ +GGKRLRP +T A L ++R D + + A AI Sbjct: 35 ERLYEATRYILEAGGKRLRPTVTTLAAEAVTGTDPLSADFREFAALDGNTVDVMRAAVAI 94 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-- 129 E I + TL+HDD++D+ LRRG A + T++L GD L S+AF + ET S A Sbjct: 95 EVIQSFTLIHDDIMDEDDLRRGVPAVHEQYDISTAILAGDTLYSKAFEFMTETGSDPANG 154 Query: 130 LEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 LEA+ ++A T + EG+ +S D+ E+YL +++ KTAVL+ A+ +++ G Sbjct: 155 LEAMRMLATTCTEICEGQSLDVSFESRDDILPEEYLEMVELKTAVLYGASAATPAVLLGA 214 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + V AL YG++ G AFQ+ DDVLD E+GK G D GK TL + A Q+G Sbjct: 215 DDEVVDALYQYGIDSGRAFQIQDDVLDLTVASEELGKQRGSDLVEGKETLITLHARQQGV 274 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + T +++ E ++ A + E ++ A +++K+ L LP+S Sbjct: 275 DVDGLVDADT--PAEVTEEAIEDAVAALEEVGSIAYARETAEDLTRRSKEHLEILPESGS 332 Query: 307 KKSLMEVVDFCLQR 320 ++ L ++ D+ + R Sbjct: 333 RELLADLADYLIVR 346 >gi|195505401|ref|XP_002099488.1| GE23324 [Drosophila yakuba] gi|194185589|gb|EDW99200.1| GE23324 [Drosophila yakuba] Length = 470 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 96/312 (30%), Positives = 159/312 (50%), Gaps = 16/312 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSG-GKRLRPMLTLATALMLEYRGDN--HVL------LAC 69 +LK S E+ D + F G GK LRPM+T+ A + Y +N H L +A Sbjct: 165 LLKSGTSQPEL--DTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIAL 222 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS A M+ +S + Sbjct: 223 FSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 282 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 LS + L +GE QL + + YL KTA L + AL+ +++IA ++ Sbjct: 283 TIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDN 342 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V + YG N+G+AFQLVDD+LD+ +MGK D + G T PV+ A ++ + Sbjct: 343 VAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELN 402 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + G ++++AF ++ ++ L T + A + +A + L +S ++K Sbjct: 403 PMVMRRFSEPG-----DVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKG 457 Query: 310 LMEVVDFCLQRL 321 L V D + R+ Sbjct: 458 LQVVADLVINRM 469 >gi|282860737|ref|ZP_06269803.1| Trans-hexaprenyltranstransferase [Streptomyces sp. ACTE] gi|282564473|gb|EFB70009.1| Trans-hexaprenyltranstransferase [Streptomyces sp. ACTE] Length = 336 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 153/305 (50%), Gaps = 4/305 (1%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L S+V I + ++L+ +GGKR RP+L + + + V A +E H AT Sbjct: 31 LLDATKSEVPFITEAAQHLVSAGGKRFRPLLVMLASQFGDPDAPGVVPAAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A WGN +VL GDFL ++A ++ EA+ + Sbjct: 91 LYHDDVMDEADVRRGVESANTRWGNSVAVLTGDFLFARA-SHILADLGPEAVRIQAEAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + Y+ V+ KT L + A +++AG SV L YG Sbjct: 150 RLVTGQILETAGPRDGRDPVDHYMDVLGGKTGSLVAVAGRFGAMMAGADESVVDILTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK--REKNFWKST 256 LGIAFQL DDVLD + +E GK G D R G TLPV+ R R ++ Sbjct: 210 ERLGIAFQLADDVLDIASDSHESGKTPGTDLREGISTLPVLHLRARAAAEGRPEDLKLVE 269 Query: 257 INDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + DG ++ + L +A +R + AL Y Q+A+ L LP+ K +L E+ D Sbjct: 270 LLDGDLNDDARLAEALHGLRAHPALEQARRDTVRYAQEARAVLTPLPECYAKSALEELCD 329 Query: 316 FCLQR 320 + R Sbjct: 330 AVVHR 334 >gi|225555298|gb|EEH03590.1| decaprenyl-diphosphate synthase subunit 1 [Ajellomyces capsulatus G186AR] Length = 521 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 93/254 (36%), Positives = 135/254 (53%), Gaps = 12/254 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A + + Sbjct: 264 LAEITELIHTASLLHDDVIDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVALARLRD 323 Query: 127 QEALEALSLVACTLAEGELRQLSLSK----NLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E LS V L EGE QL ++ N TE+ YL K+A L S + Sbjct: 324 PEVIELLSTVIANLIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLISKSCRA 383 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ + +A SYG NLG+AFQLVDD+LDY +E+GK G D G T P++ Sbjct: 384 AALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTISGDELGKPAGADLELGLATAPLL 443 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ + + +G + + A I+ ++ L T A Y KA S+R Sbjct: 444 FAWRANPELGALVGRKFSGEGDVQL-----ARQIVSQSDGLEQTRALAQEYTNKAIQSIR 498 Query: 300 CLPDSSWKKSLMEV 313 LPD+ K L+E+ Sbjct: 499 ILPDTEAKTGLIEM 512 >gi|325094604|gb|EGC47914.1| decaprenyl-diphosphate synthase subunit [Ajellomyces capsulatus H88] Length = 522 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 93/254 (36%), Positives = 135/254 (53%), Gaps = 12/254 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A + + Sbjct: 265 LAEITELIHTASLLHDDVIDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVALARLRD 324 Query: 127 QEALEALSLVACTLAEGELRQLSLSK----NLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E LS V L EGE QL ++ N TE+ YL K+A L S + Sbjct: 325 PEVIELLSTVIANLIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLISKSCRA 384 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ + +A SYG NLG+AFQLVDD+LDY +E+GK G D G T P++ Sbjct: 385 AALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTISGDELGKPAGADLELGLATAPLL 444 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ + + +G + + A I+ ++ L T A Y KA S+R Sbjct: 445 FAWRANPELGALVGRKFSGEGDVQL-----ARQIVSQSDGLEQTRALAQEYTNKAIQSIR 499 Query: 300 CLPDSSWKKSLMEV 313 LPD+ K L+E+ Sbjct: 500 ILPDTEAKTGLIEM 513 >gi|313205981|ref|YP_004045158.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868] gi|312445297|gb|ADQ81652.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868] gi|325336579|gb|ADZ12853.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer RA-GD] Length = 323 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 102/333 (30%), Positives = 171/333 (51%), Gaps = 25/333 (7%) Query: 1 MKML---EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 MK L +DL + +EK F ++ + + + + Y+I GGKRLRP++ L + Sbjct: 1 MKFLDRYQDLVAEAIEKHQFK------NEPKELYEPMNYIISHGGKRLRPIMVLMGCELF 54 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 + + A AIEF H TL+HDD++DD+ LRR K + G +L GD LL +A Sbjct: 55 GGSLEKAMKPALAIEFFHNFTLIHDDIMDDAPLRRNKPTIHTLHGINVGILSGDALLIKA 114 Query: 118 FCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 + + + + + ++L + T L EG+ ++ N +VT EDY+ +I KT VL + Sbjct: 115 YQFFEDLEPELFKKCITLFSETGAVLCEGQQMDVNFETNSNVTYEDYIKMITYKTGVLSA 174 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A+ ++ ++IAG +AL +G ++GIAFQ++DD LD G + GK D K Sbjct: 175 ASFKIGAMIAGATEQEAEALYQFGKHIGIAFQIMDDYLDVFGNQEQFGKKHAGDIFENKK 234 Query: 235 TLPVILAFQRGTKREK---NFWKSTINDGKISVENLKKAFIIMRENRALVDTEY--RAYS 289 T+ +LA + T+ E+ N+W S D + ++K F R VD + Sbjct: 235 TVLYLLAMENATEEERKELNYWYSKKTDNIDKIYCVEKIF-----RRTKVDEKVLRLIQK 289 Query: 290 YGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQR 320 + Q +D L+ LP+ K+ +E+ ++ L+R Sbjct: 290 HNQIGQDCLKTINLPEDK-KQPFIELANYLLKR 321 >gi|166362742|ref|YP_001655015.1| solanesyl diphosphate synthase [Microcystis aeruginosa NIES-843] gi|166085115|dbj|BAF99822.1| solanesyl diphosphate synthase [Microcystis aeruginosa NIES-843] Length = 323 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 96/291 (32%), Positives = 156/291 (53%), Gaps = 10/291 (3%) Query: 35 KYLIFSGGKRLRPMLTL--ATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP + L + A ML+ H LA E IHTA+L+HDDVVD++ LR Sbjct: 38 EHLFEAGGKRVRPAIVLLVSRATMLDRDITPRHRRLAEITEMIHTASLVHDDVVDEAELR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 R ++ N+ +VL GDFL +Q+ + + E ++ LS V AEGE++Q Sbjct: 98 RRVPTVNSLFDNRVAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEIQQGINR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + ++ YL KTA L + + + + +++ V L +YG +LG+AFQ+VDD+ Sbjct: 158 FDTSISLAAYLEKSYYKTASLIANSAKAAGVLSEQSAEVNHHLYNYGRDLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE-NLKKA 270 LD+ +GK G D +G T P + A E+N + + + + S E +++KA Sbjct: 218 LDFTSPTEVLGKPSGSDLISGNITAPALFAM------EENSYIEVLIEREFSQEGDIEKA 271 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 + ++ + ++ A YGQ A L CL S K L+E+VD+ L R+ Sbjct: 272 LDFIHSSQGIPRSKELADQYGQSALKHLECLASSPSKDVLIELVDYVLSRI 322 >gi|261416040|ref|YP_003249723.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 295 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 88/254 (34%), Positives = 144/254 (56%), Gaps = 12/254 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y +F+GGKRLRP L AT M +G+ L A+E +HT +L+HDD+ VD+ Sbjct: 42 EAMRYSMFAGGKRLRPGLAKATFDMFGGKGEKIWLATSALEMLHTFSLIHDDLPCVDNDD 101 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT--LAEGELRQ 147 RRGK+ + +G T+V+ GD L AF M+ +T + +A+E L+ + T + GE+ Sbjct: 102 YRRGKLTSHKKFGEATAVMAGDALCIHAFEMMGKTGNAKAIELLAHLLGTYGMIGGEMTD 161 Query: 148 LSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + K +D+ DY+H KTA L A+L V +++A + +++YG ++G+AFQ Sbjct: 162 IECEGKTVDLEIVDYIHY--HKTAALIEASLLVGAMLAKASEKDMEIIRNYGRSIGLAFQ 219 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN--DG---K 261 +VDD+LD E+GK+ G D GK T P I+ ++ +R + ++ +I DG Sbjct: 220 IVDDILDIVSTTEELGKDAGSDIEKGKATYPSIVGLEKSRERARELYEESIKALDGLTCD 279 Query: 262 ISVENLKKAFIIMR 275 S+ A+II R Sbjct: 280 TSILRSIAAYIITR 293 >gi|110638671|ref|YP_678880.1| octaprenyl-diphosphate synthase [Cytophaga hutchinsonii ATCC 33406] gi|110281352|gb|ABG59538.1| octaprenyl-diphosphate synthase [Cytophaga hutchinsonii ATCC 33406] Length = 326 Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 99/297 (33%), Positives = 162/297 (54%), Gaps = 3/297 (1%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S V ++ ++ Y++ GK++RPM +A + D+ A IE +HTATL+HDDV Sbjct: 30 SKVMLLDKIMSYIVKRNGKQMRPMFVFLSAHLAGNVNDSTQRGAALIELLHTATLVHDDV 89 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VDDS RRG + +W N+ +VLVGD+LLS+ + I L+ +S ++EGE Sbjct: 90 VDDSDYRRGMFSINALWKNKIAVLVGDYLLSKGLLLSINHGDFHLLKIVSNAVREMSEGE 149 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ ++NL++ EE Y +I+ KTA L ++ V G ++ + K +G +G+A Sbjct: 150 LLQIEKARNLNINEEIYFEIIRQKTASLIASCCAVGVSSTGADEALVERAKMFGEKIGMA 209 Query: 205 FQLVDDVLDYRGEVNEM-GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 FQ+ DD+ DY E +EM GK +G D + K TLP+I A + + EK I + Sbjct: 210 FQVKDDLFDY--ETSEMIGKPVGIDIKERKMTLPLIYALNKASWLEKKRIMFIIKNQTHK 267 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +K+ +RE+ + T ++ ++A L DS +KK+L ++VD+ + R Sbjct: 268 SAKVKEVLQFVRESGGIEYTRTVMENFREEAYGFLEEFQDSVYKKALRDLVDYTIAR 324 >gi|229084617|ref|ZP_04216886.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-44] gi|228698693|gb|EEL51409.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-44] Length = 320 Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 89/303 (29%), Positives = 157/303 (51%), Gaps = 10/303 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++I D LI +GGKR+RP+ L +Y+ + +A A+E IH A+L+ Sbjct: 23 KVVASEQQLIEDAALQLIEAGGKRIRPVFVLLAGKFGDYKLETIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRR WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAALLRRNSATVNAKWGDRIAMYTGDYLFAKSLECITNLEVPEAHQALSYTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ N + YL IK KTA+L +A+ ++ ++ +G L YG Sbjct: 143 CKGEIEQIKDKYNYNQNLRTYLRRIKRKTALLIAASCQLGAIASGASRDTVNRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFWKSTI 257 +G+++Q++DD+LD+ ++GK G D G TLP + A + REK +T Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNVTLPALYAMEDPKLREKIVSVHENTTA 262 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 ++ K + ++K + I ++A +E Y KA + ++ LP K +L V + Sbjct: 263 SEMKEIIHDIKTSPAI---DQAFAFSE----RYLHKALEVIKPLPRGQAKYALQNVAKYI 315 Query: 318 LQR 320 +R Sbjct: 316 GKR 318 >gi|195107776|ref|XP_001998484.1| GI23994 [Drosophila mojavensis] gi|193915078|gb|EDW13945.1| GI23994 [Drosophila mojavensis] Length = 435 Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 152/299 (50%), Gaps = 14/299 (4%) Query: 32 DVVKYLIFSG-GKRLRPMLTLATALMLEYRGDN--HVL------LACAIEFIHTATLLHD 82 D + F G GK LRPM+T+ A L Y +N H L +A E +H+A+L+HD Sbjct: 141 DTIACYYFDGQGKALRPMVTMLMAKALNYHLNNESHQLVHKQRQIALFSEMVHSASLVHD 200 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D S RRGK + +W ++ + GD++LS A M+ +S + LS + L + Sbjct: 201 DVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMISRLRSDDVTIVLSQILTDLVQ 260 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE QL + + YL KTA L + AL+ +++IA ++V + YG N+G Sbjct: 261 GEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIG 320 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQLVDD+LD+ +MGK D + G T PV+ A ++ + + G + Sbjct: 321 LAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELNPMVMRRFSEPGDV 380 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++AF ++ ++ L T + A + +A + L +S ++K L V D + R+ Sbjct: 381 -----ERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKGLQVVADLVINRM 434 >gi|157413035|ref|YP_001483901.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9215] gi|157387610|gb|ABV50315.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9215] Length = 323 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 168/293 (57%), Gaps = 14/293 (4%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKRLRP +L ++ A+ E+ H LA E IHTA+L+HDDVVD++A R Sbjct: 38 EHLFSAGGKRLRPGIVLLISKAISPEFCLTSKHKRLAEITEMIHTASLVHDDVVDEAATR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG + + +VL GDFL +QA + + ++ LS V LAEGE++Q +L+ Sbjct: 98 RGVDTVHSRFNTRVAVLAGDFLFAQASWHLANLDNVNVVKLLSRVIMDLAEGEIKQ-NLN 156 Query: 152 KNLDVTEEDYLHVIKS--KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + D + ++ KS KTA L + + + + +++G+ + +L +G N+G+AFQ+VD Sbjct: 157 R-FDSAQSFSKYINKSYCKTASLIANSCKAAGVLSGINDENLTSLYEFGKNIGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN-LK 268 D+LD+ G ++GK D +G T PV+ A E+N S + + +++ +N L Sbjct: 216 DILDFTGNDKQLGKPAVSDLASGYLTAPVLYAL------EENKQLSVLINRELAEKNDLD 269 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A I+ ++A+ + A + +K+++ LPDS +K++LM + +F L R+ Sbjct: 270 DALNIIMNSKAIDSSRKLAEDFAMLSKEAIVWLPDSEYKRALMALPEFVLSRI 322 >gi|195158222|ref|XP_002019991.1| GL13744 [Drosophila persimilis] gi|194116760|gb|EDW38803.1| GL13744 [Drosophila persimilis] Length = 445 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 153/299 (51%), Gaps = 14/299 (4%) Query: 32 DVVKYLIFSG-GKRLRPMLTLATALMLEYRGDN--HVLL------ACAIEFIHTATLLHD 82 D + F G GK LRPM+T+ A + Y +N H L+ A E +H+A+L+HD Sbjct: 151 DTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQVALFSEMVHSASLVHD 210 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D S RRGK + +W ++ + GD++LS A M+ +S + LS + L + Sbjct: 211 DVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIVLSQILTDLVQ 270 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE QL + + YL KTA L + AL+ +++IA ++V + YG N+G Sbjct: 271 GEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIG 330 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQLVDD+LD+ +MGK D + G T PV+ A ++ + + G Sbjct: 331 LAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELNPMVMRRFSEPG-- 388 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++++AF ++ ++ L T + A + +A + L +S ++K L V D + RL Sbjct: 389 ---DVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKGLQVVADLVINRL 444 >gi|302559082|ref|ZP_07311424.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000] gi|302476700|gb|EFL39793.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000] Length = 336 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 92/309 (29%), Positives = 154/309 (49%), Gaps = 12/309 (3%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ S+V +I ++L+ +GGKR RP+L + +A + V A +E H AT Sbjct: 31 LLEATKSEVPLITGAAQHLVRAGGKRFRPLLVMLSAQFGDPYAPGVVPSAVVVELTHLAT 90 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D++ +RRG +A WGN +VL GDFL ++A ++ EA+ + Sbjct: 91 LYHDDVMDEAEVRRGVASANARWGNSVAVLTGDFLFARA-SHILADLGPEAVRVQAEAFE 149 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ + + ++ + YL V+ KT L + + ++++G ++V L YG Sbjct: 150 RLVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGAMMSGADDTVVDVLTQYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK-------N 251 LG+AFQL DDVLD + +E GK G D R G TLPV+ +R + Sbjct: 210 ERLGVAFQLADDVLDIASDSHESGKTPGTDLREGIATLPVLRLRERAARLGLADDLALCE 269 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 S + D E L+ ++R + AL Y ++A+ +L L + K +L+ Sbjct: 270 LLDSDLTDDARHAEALR----LLRAHPALEHARRDTVRYAEEARAALAPLRECEAKAALV 325 Query: 312 EVVDFCLQR 320 ++ D + R Sbjct: 326 QLCDAVVHR 334 >gi|15805956|ref|NP_294656.1| polyprenyl synthase [Deinococcus radiodurans R1] gi|6458656|gb|AAF10509.1|AE001946_1 polyprenyl synthase [Deinococcus radiodurans R1] Length = 320 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/225 (37%), Positives = 128/225 (56%), Gaps = 10/225 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTL---------ATALMLEYRGDNHVLLACAIEFIH 75 SDVE I + + L+ +GGKR+RP++TL AL + D + L+ +E +H Sbjct: 16 SDVEFIAIIGEDLVTAGGKRVRPLVTLLAAQALGAGPDALATSHSWDELLRLSVCVELLH 75 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALS 134 +A+LLHDD++DDS RRG+ A +GN SV+ GDF+L++ + AL A Sbjct: 76 SASLLHDDLIDDSDKRRGQETAFRRFGNVVSVMSGDFMLARLLGELSGMPGSPALTRAFG 135 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 A + EGE+ Q ++ D + E+Y VI KTA L A + +++ G +S R AL Sbjct: 136 QAASVICEGEVLQFQVASYADYSFENYFQVIHGKTAALLELAAQAPAMLLGADDSARDAL 195 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++G G+AFQ+ DD+LD GE ++GK +G D R GK T PV+ Sbjct: 196 STFGREYGMAFQMQDDLLDLLGEEAQIGKPVGGDLREGKATYPVL 240 >gi|284928810|ref|YP_003421332.1| solanesyl diphosphate synthase [cyanobacterium UCYN-A] gi|284809269|gb|ADB94974.1| solanesyl diphosphate synthase [cyanobacterium UCYN-A] Length = 323 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 158/292 (54%), Gaps = 12/292 (4%) Query: 35 KYLIFSGGKRLRPMLTL--ATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGK +RP + L + A MLE GD +H LA E IHTA+L+HDD+VD++ Sbjct: 38 EHLFDAGGKHIRPAIVLLVSKATMLE--GDITPHHRRLAEITEMIHTASLVHDDIVDEAV 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRR ++ N+ +VL GDFL +Q+ + + + ++ LS V AEGE+ Q Sbjct: 96 LRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLQVVKLLSEVIRDFAEGEISQGI 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + +T + YL KTA L + + + +++++ + ++ +YG LG+AFQ+VD Sbjct: 156 NRFDTSLTLDSYLDKSYYKTASLIANSAKSATILSNSSLDIINSIYTYGRCLGLAFQIVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ +GK G D NG T PV+ A + T + N K +++K Sbjct: 216 DILDFTSPTKVLGKPAGSDLINGNITAPVLFAMEE-TPYLAKLIEREFNQEK----DIEK 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A I+ E++ + ++ A Y A + L CL S + +SL E+V++ L RL Sbjct: 271 ALAIVAESKGIQRSQELAKYYALLAIEQLDCLKPSPFSQSLTELVNYVLDRL 322 >gi|91070145|gb|ABE11067.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone HF10-11A3] Length = 327 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 163/292 (55%), Gaps = 12/292 (4%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKRLRP +L ++ A+ E+ H LA E IHTA+L+HDDVVD+++ R Sbjct: 42 EHLFSAGGKRLRPGIVLLISKAISPEFCLTSKHKRLAEITEMIHTASLVHDDVVDEASTR 101 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG + + +VL GDFL +QA + + ++ LS V LAEGE++Q +L+ Sbjct: 102 RGVDTVHSRFNTRVAVLAGDFLFAQASWHLANLDNVNVVKLLSRVIMDLAEGEIKQ-NLN 160 Query: 152 KNLDVTEEDYLHVIKS--KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + D + ++ KS KTA L + + + + +++G+ + +L +G N+G+AFQ+VD Sbjct: 161 R-FDSAQSFSKYINKSYCKTASLIANSSKAAGVLSGLNDEHLTSLYDFGKNIGLAFQVVD 219 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T PV+ A + K IN ++L Sbjct: 220 DILDFTGNDKQLGKPAVSDLASGYLTAPVLYALEENKK-----LSVLINRELAEKDDLDD 274 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A I+ ++A+ + A + +K++L LPDS +K++LM + +F L R+ Sbjct: 275 ALSIIMNSKAIESSRKLAEDFAMLSKEALVWLPDSEYKRALMALPEFVLSRI 326 >gi|323358802|ref|YP_004225198.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum StLB037] gi|323275173|dbj|BAJ75318.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum StLB037] Length = 353 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 87/284 (30%), Positives = 147/284 (51%), Gaps = 8/284 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +YL +GGKR+RPML + TA + + +A A+E H +L HDDV+D + RR Sbjct: 60 TARYLYEAGGKRVRPMLAILTAQLGRGTTPEVIEVATALELTHLGSLYHDDVMDGADKRR 119 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G +A+ VWGN ++L GD L S+A ++ + + A++ + L G++ + + Sbjct: 120 GVPSAQTVWGNNIAILTGDLLFSRA-SQLMARRGERAIQLQADTFERLVLGQMHETVGPQ 178 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 D E YL V+ KT L +AA + + +G Q + +G G+AFQL+DDV+ Sbjct: 179 EGDEPVEFYLRVLADKTGSLIAAAAQCGVIYSGAPEEFEQPMVVFGEKAGVAFQLLDDVI 238 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 D + +E GK G D R G PT+P +L R + + I++G+ + I Sbjct: 239 DLSPDASETGKVPGTDLRAGVPTMPYLLLGHRSDAASADL-RGRIDEGQERIAAGADPAI 297 Query: 273 I------MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + +R++ +T A+ + Q+A D+L LPD + +++L Sbjct: 298 LDAPLAELRDHDTTHETLRLAHQWSQEAIDALAPLPDGAVREAL 341 >gi|195388636|ref|XP_002052985.1| GJ23628 [Drosophila virilis] gi|194151071|gb|EDW66505.1| GJ23628 [Drosophila virilis] Length = 445 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 152/299 (50%), Gaps = 14/299 (4%) Query: 32 DVVKYLIFSG-GKRLRPMLTLATALMLEYRGDN--HVL------LACAIEFIHTATLLHD 82 D + F G GK LRPM+T+ A L Y +N H L +A E +H+A+L+HD Sbjct: 151 DTIACYYFDGQGKALRPMVTMLMAKALNYHLNNESHQLVHKQRQIALFSEMVHSASLVHD 210 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D S RRGK + +W ++ + GD++LS A M+ +S + LS + L + Sbjct: 211 DVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMISRLRSDDVTIVLSQILTDLVQ 270 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE QL + + YL KTA L + AL+ +++IA ++V + YG N+G Sbjct: 271 GEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIG 330 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQLVDD+LD+ +MGK D + G T PV+ A ++ + + G + Sbjct: 331 LAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELNPMVMRRFSEPGDV 390 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++AF ++ ++ L T + A + +A + L +S ++K L V D + R+ Sbjct: 391 -----ERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKGLQVVADLVINRM 444 >gi|257054406|ref|YP_003132238.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] gi|256584278|gb|ACU95411.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] Length = 337 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 93/310 (30%), Positives = 151/310 (48%), Gaps = 14/310 (4%) Query: 19 ILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACAIEFIHT 76 IL+ + S+V I + ++L+ +GGKR RPM TL A R D+ + A A+E +H Sbjct: 36 ILREVARSEVSAIEEAARHLVDAGGKRFRPMFTLLAAQFGTGGRRDDVITAAAAVELVHL 95 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 ATL HDDV+D++ +RRG + W N ++L GD+L + A +V + + +A ++ Sbjct: 96 ATLYHDDVMDEATMRRGAPSVNARWDNSVAILTGDYLFAHASRLVADLGT----DAARII 151 Query: 137 ACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 A T E G++R+ D E YL VI KT L + A + +G +A Sbjct: 152 AETFGELVTGQMRETVGPGADDDHVEHYLSVIAQKTGSLIATAGRFGGMFSGASPEHVEA 211 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT-KREKNF 252 L+ +G +G AFQ+ DD++D GK G D R G TLP+ A R Sbjct: 212 LRRFGDIIGTAFQISDDIIDITSPSTTSGKVQGTDLREGVRTLPMYYALAHDPDPRLVEL 271 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 + D + +++A ++R + L T Y ++A++ L LP S + + Sbjct: 272 LSGPLTDDAL----VEEALELLRRSGGLERTRATLADYARRAREELAVLPASPARDACES 327 Query: 313 VVDFCLQRLN 322 V D+ + R + Sbjct: 328 VADYLVARTH 337 >gi|270001562|gb|EEZ98009.1| hypothetical protein TcasGA2_TC000408 [Tribolium castaneum] Length = 339 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 90/302 (29%), Positives = 149/302 (49%), Gaps = 21/302 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL------------LACAIEFIHTATL 79 ++ Y GK +RPM+ + A + Y H+ +A E IHTA+L Sbjct: 46 EIATYYFDGHGKAIRPMVAILMARAINY----HIYKEKSGLLTSQREVAMISEMIHTASL 101 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 +HDDV+D S RRGK + ++W ++ + GDF+L+ A M+ K+ + LS V Sbjct: 102 VHDDVIDQSDFRRGKPSVNVMWNHKKVTMAGDFILAVASIMIARLKNNDVTLVLSQVVSD 161 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 L +GE QL + + YL KTA L + +++ +++AG + YG Sbjct: 162 LVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANSVKSVTMLAGADEQLSDISYQYGR 221 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 NLG+AFQLVDD+LD+ MGK D + G T PV+ A ++ + + Sbjct: 222 NLGLAFQLVDDLLDFVSSSAAMGKPTAADLKLGLATAPVLFACEKFPELNPMIMRRFQEP 281 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 G ++++AF ++ ++R L T+Y A + Q+A L +S ++K L+ D+ L Sbjct: 282 G-----DVERAFDLVHKSRGLEQTQYLAKQHCQEAVRLANLLEESPYQKGLIVAADYVLN 336 Query: 320 RL 321 R+ Sbjct: 337 RM 338 >gi|146304882|ref|YP_001192198.1| geranyltranstransferase [Metallosphaera sedula DSM 5348] gi|145703132|gb|ABP96274.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Metallosphaera sedula DSM 5348] Length = 327 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 131/246 (53%), Gaps = 7/246 (2%) Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 KVN + + D + + +YLI +GGKRLRP++ + ++ +L +L A+E Sbjct: 13 KVNATMDSFLHGDTRELYEASRYLISAGGKRLRPLVVVLSSDLLGGERHRAILAGAAVEV 72 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-------KS 126 +H TL+HDD++D RRG + WG T++L GD L ++AF ++ E+ + Sbjct: 73 LHNFTLIHDDIMDQDTTRRGIPTVHVKWGIPTAILAGDLLHAKAFQILTESIKGLSGDVA 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ S ++EG+ + K D+ E+DYL +I+ KTA LF+ + + ++AG Sbjct: 133 YKVLDCFSRSVIVVSEGQAMDMEFEKRWDIREKDYLEMIRRKTAQLFACSAYLGGVLAGG 192 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 L +G +GIAFQ+VDD+L + E+GK + D R K TL VI + +R Sbjct: 193 SEEEVNNLYEFGEKMGIAFQIVDDILGITADEKELGKPLYSDIREAKKTLLVIKSLERAN 252 Query: 247 KREKNF 252 E+ Sbjct: 253 SEERKI 258 >gi|152964618|ref|YP_001360402.1| polyprenyl synthetase [Kineococcus radiotolerans SRS30216] gi|151359135|gb|ABS02138.1| Polyprenyl synthetase [Kineococcus radiotolerans SRS30216] Length = 344 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/301 (33%), Positives = 159/301 (52%), Gaps = 14/301 (4%) Query: 20 LKRICSDVEMIPDVV-KYLIFSGGKRLRPMLTLATALMLEYRGD--NHVL-LACAIEFIH 75 L+ + + I D ++L+ +GGKR+RPMLTL A + + + VL A +E H Sbjct: 36 LRLAVGNADPIADAASRHLVEAGGKRVRPMLTLLGAHLAGSAPEVPSAVLDAAVVVELTH 95 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 A+L HDDV+D + RRG AA+LV+GN ++L GD L ++A +V EA+ L Sbjct: 96 LASLYHDDVMDSAPTRRGAAAAQLVYGNNVAILTGDLLFARASNVVAGLGP----EAVRL 151 Query: 136 VACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 A T L G+L + K + E YL V+ KTA L + A ++ AG Sbjct: 152 QAETFERLCLGQLHETVGPKPGEDPVEHYLDVLSDKTASLIATAGRFGAMFAGGSGETVT 211 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 A+ YG ++G+AFQL DDVLD +V++ GK G D R G PTLPV+LA + + Sbjct: 212 AMVRYGEDVGVAFQLADDVLDLTSDVDDSGKRPGTDLREGVPTLPVLLARRAAAAGDVAA 271 Query: 253 WK--STINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + ++ G+++ ++ L +A +R++ A + +A L LPD+ +++ Sbjct: 272 RRVVALLDSGRLADDDVLAEAVSALRDHPVTEAARASAREWAHRAATHLLALPDTPARRA 331 Query: 310 L 310 L Sbjct: 332 L 332 >gi|229496293|ref|ZP_04390013.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406] gi|229316871|gb|EEN82784.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406] Length = 325 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/291 (32%), Positives = 158/291 (54%), Gaps = 24/291 (8%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAI--EFIHTATLLHDDVVDDSALRRGKVAARL 99 GK +RP+L + + L+ + N ++CA+ E +H A+L+HDDV+D + LRRGK Sbjct: 45 GKHIRPIL-MGLLVSLQGKEPNQRTISCAVLLEMLHMASLIHDDVIDQAPLRRGKPTLNA 103 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 +GN ++VLVGD++LS AF E + ++ + L+EGEL Q+ ++ + E+ Sbjct: 104 FYGNHSAVLVGDYILSIAFLRAAEIGGSSLIRTVANLGKHLSEGELLQIQVATERIIDEK 163 Query: 160 DYLHVIKSKTAVLFS--AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 +Y +I+ KTA LF AAL + S+ A + ++ + G +LGIAFQL DD+ DY E Sbjct: 164 NYFSIIEKKTATLFEACAALGMYSIDAKPEELLK--MTQLGKHLGIAFQLRDDIFDYTKE 221 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 +E+GK +G D + GK TLP+I + + K K+ ++ VE+ +KA + + Sbjct: 222 -SEVGKPVGNDLKEGKITLPLIYVYNQADANLKEQIKNLLD----KVESDEKAIADLLQ- 275 Query: 278 RALVDTEYRAYSYGQ--------KAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + ++ Y Q KA LR P+S SL+ + ++ +R Sbjct: 276 ---MAHQFGGIDYAQKRLEEELSKALTILRSFPNSPANNSLVLLTEYLGKR 323 >gi|182437084|ref|YP_001824803.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465600|dbj|BAG20120.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 356 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 101/326 (30%), Positives = 163/326 (50%), Gaps = 18/326 (5%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYR 60 LE L+ +E+V +LK C+ P +V +LI +GGKRLRP+LTL A + R Sbjct: 38 LERRVLRGLEQVETRLLK--CAGEAEDPRLAEVAGHLIAAGGKRLRPLLTLLGAEFGDVR 95 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ + A E IHTA+L HDDV+D++ LR G + WGN +V G++LL++A Sbjct: 96 GEGVIEAAVVAELIHTASLHHDDVMDEALLRHGVSSVNARWGNTVAVRSGNWLLARA-AR 154 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + + EA+ + + L G+LR+L + Y VI K+A L S +L + Sbjct: 155 LSASLAPEAIPLQAEASERLVRGQLRELVGPDGAERRLSHYFAVISDKSASLISLSLRLG 214 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AG V +AL +YG +LG+AFQ+ DD+LD E+GK G+D G LPV+L Sbjct: 215 AVQAGAPAGVGEALAAYGEHLGVAFQISDDLLDITSSSAELGKEQGKDLAVGVAGLPVLL 274 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN------RALVDTEYRAYSYGQKA 294 ++ + + ++ +++ + R ++D A A Sbjct: 275 VLDDAWPGDEELRSLLSGAQAMRGQQHERTLALLQRSGCMARARGIMDERLAA------A 328 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320 + SL LP +K+L + +F R Sbjct: 329 RASLGPLPPGPARKALESLCEFVATR 354 >gi|329961528|ref|ZP_08299609.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057] gi|328531740|gb|EGF58569.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057] Length = 324 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 92/251 (36%), Positives = 135/251 (53%), Gaps = 11/251 (4%) Query: 12 MEKVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--A 68 +EK+N I + + + D V Y++ GGKR+RP+L L + Y+ D + A Sbjct: 8 LEKINSHIADLKFTRTPQGLYDPVSYVLSMGGKRIRPVLMLMAYNL--YKEDLARIYGPA 65 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-- 126 IE H TLLHDD++D + RRGK VW + T++L GD +L A+ + + Sbjct: 66 TGIEVYHNYTLLHDDLMDRADRRRGKETVHKVWNDNTAILSGDAMLVLAYRFMAQCPVDC 125 Query: 127 -QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +E +E SL A + EG+ + DV EE+YL +I+ KT VL +A+L++ +L+ G Sbjct: 126 LKEVMELFSLTALEICEGQQMDMEFELRKDVREEEYLEMIRLKTGVLLAASLKIGALLGG 185 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 L +GMNLG+AFQL DD+LD G+V GKNIG D K T +I AF+ Sbjct: 186 ASAEDAGHLYDFGMNLGVAFQLKDDLLDVYGDVAVFGKNIGGDILCNKKTYMLIKAFEHA 245 Query: 246 TK---REKNFW 253 +E N W Sbjct: 246 DDIQLQELNAW 256 >gi|189460221|ref|ZP_03009006.1| hypothetical protein BACCOP_00858 [Bacteroides coprocola DSM 17136] gi|189433082|gb|EDV02067.1| hypothetical protein BACCOP_00858 [Bacteroides coprocola DSM 17136] Length = 324 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/312 (30%), Positives = 161/312 (51%), Gaps = 3/312 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 K++ + L + S ++ +V+ Y+ GK +RP+L L A + D+ + A Sbjct: 13 KELSEFKALFDASLKSSTPLLDEVLGYIKQRNGKMMRPILVLLMAKLYGGINDSTLHAAL 72 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 ++E +HTA+L+HDDVVD+S RRG+ + ++ N+ SVLVGD++L+ + T E Sbjct: 73 SLELLHTASLVHDDVVDESNKRRGQSSVNALYDNKVSVLVGDYMLATSLRHASYTNHIEL 132 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL-IAGVQN 188 + ++ + L+EGE+ QL N D +EE Y VI+ KTA LF+A+ E ++ + ++ Sbjct: 133 VGLVARLGQDLSEGEIIQLVNISNRDFSEEIYFDVIRKKTAALFTASAESGAISVNAPKD 192 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 V +A+ +G +GIAFQ+ DD+ DY + E+GK G D GK TLP + Sbjct: 193 EVEKAV-LFGEMIGIAFQIKDDIFDYF-DNEELGKPTGNDMMEGKLTLPALHVLNTCANE 250 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 EK I S E + +++ + E Y Y KA L D + + Sbjct: 251 EKKELALRIRSLSASKEEIASFVDYVKQEGGITYAEQVMYDYRNKALALLPEAADEAVRT 310 Query: 309 SLMEVVDFCLQR 320 +L +D+ ++R Sbjct: 311 ALTAYIDYVIKR 322 >gi|220910193|ref|YP_002485504.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7425] gi|219866804|gb|ACL47143.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7425] Length = 323 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 90/293 (30%), Positives = 152/293 (51%), Gaps = 8/293 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L + GKR+RP + L A + + H LA E IHTA+L HDDVVD S Sbjct: 36 AAEHLFGAEGKRIRPAIVLLLARAISPSQEISSRHRRLAEITEMIHTASLFHDDVVDQSD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG ++GN+ ++ GDFL +QA + + + ++ LS V AEGE++Q Sbjct: 96 LRRGLPTVHSLFGNRIAIQAGDFLFAQASWYLADLDNLTVVKLLSQVIKDFAEGEIQQGF 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + +T YL KTA L + + + +++G+ Q+L YG ++G+AFQ+VD Sbjct: 156 NRFDTSLTMAAYLDKTYYKTASLIANSSKAVGVLSGISAQSSQSLYEYGRHVGLAFQIVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ +++GK G D ++G T P + A + E+ + K I +L+ Sbjct: 216 DILDFTRSTDDLGKPAGSDLKDGTLTAPALYALE-----EQPYLKVLIEREFRETGDLEA 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 A +++ +R + A Y A L LP+S +++L + ++ L+RL+ Sbjct: 271 AIALVQNSRGIERARQLAEKYAHTAVQYLADLPESDAQQALTHLTEYILKRLH 323 >gi|332159126|ref|YP_004424405.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Pyrococcus sp. NA2] gi|331034589|gb|AEC52401.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Pyrococcus sp. NA2] Length = 341 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 24/317 (7%) Query: 28 EMIPD--------VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 E+IP+ ++ +GGKR+RP + L + + + A AIE IH +L Sbjct: 23 EIIPEKEPKVLYEAARHYPLAGGKRVRPFVVLTSTEAVGGDWRKALYPAVAIELIHNYSL 82 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALS 134 +HDD++D RRGK VWG ++L GD L S+AF V K + LE + Sbjct: 83 VHDDIMDMDETRRGKPTVHRVWGINMAILAGDLLFSKAFEAISRAEVPPEKKAKILETIV 142 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L + L EG+ L VT E+Y++++ KT LF A+ ++ ++ AL Sbjct: 143 LASNELCEGQAMDLEFENREAVTIEEYMNMVSGKTGALFEASAKIGGIVGSESEEYINAL 202 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF-- 252 +G N+GIAFQ+ DDVLD + ++GK +G D R GK TL V F+ ++ K Sbjct: 203 ARWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSDIRKGKKTLIVAHFFENADEKAKERFL 262 Query: 253 -----WKSTINDGKISVENLK----KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + + I E++K +A +++E ++ A KA ++L LP+ Sbjct: 263 KVFGKYAGDVRGSGIIEEDVKAEVMEAIELLKEYGSIDYAAKVAKELVDKANEALSILPE 322 Query: 304 SSWKKSLMEVVDFCLQR 320 S ++ L + +F ++R Sbjct: 323 SKARRDLELLANFIVER 339 >gi|237713977|ref|ZP_04544458.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262407029|ref|ZP_06083578.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646605|ref|ZP_06724237.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a] gi|294809763|ref|ZP_06768447.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b] gi|229445801|gb|EEO51592.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355732|gb|EEZ04823.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638047|gb|EFF56433.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a] gi|294443003|gb|EFG11786.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b] Length = 324 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 10/228 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 ++Y++ GGKR+RP+L L + YR D + A AIE H TLLHDD++D S +R Sbjct: 31 IEYILSLGGKRIRPVLMLMGYNL--YREDVASIYDPATAIEVYHNHTLLHDDLMDRSDVR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---ETKSQEALEALSLVACTLAEGELRQL 148 RGK VW + T+VL GD +L AF + + +E ++ SL + EG+ + Sbjct: 89 RGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQEHLKEVMDLFSLTTLEICEGQQLDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE++Y+ +I+ KTAVL +A+L++ +++AG + L +GM++G+AFQL Sbjct: 149 EFESRCDVTEDEYIEMIRLKTAVLLAASLKIGAILAGATAEDAENLYHFGMHIGVAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFW 253 DD+LD G+ GK IG D K T +I A R ++++ N W Sbjct: 209 DDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALNRADEKQREELNRW 256 >gi|134103316|ref|YP_001108977.1| polyprenyl diphosphate synthase component [Saccharopolyspora erythraea NRRL 2338] gi|291004465|ref|ZP_06562438.1| polyprenyl diphosphate synthase component [Saccharopolyspora erythraea NRRL 2338] gi|133915939|emb|CAM06052.1| polyprenyl diphosphate synthase component [Saccharopolyspora erythraea NRRL 2338] Length = 344 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 9/309 (2%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 V L+ + + SD+E +L+ +GGKR RP+ L A + R +N + A +E + Sbjct: 40 VEALLHESVRSDLEFATRTSLHLVDAGGKRFRPLFALLAAQFGDPRTENVIKSAAVVEMV 99 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 H ATL HDDV+D++ +RRG +A W N ++L GDFL +QA +V + + A E ++ Sbjct: 100 HLATLYHDDVMDEATMRRGATSANARWDNSVAILTGDFLFAQASRLVADLGTDAARE-MA 158 Query: 135 LVACTLAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 L G++R+ + + ++ D + YL VI KT L + A +L +G A Sbjct: 159 RTFEALVTGQMRETVGVGRDEDPVDF-YLKVIYEKTGSLIAIAGRFGALFSGASPEQVTA 217 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF-QRGTK-REKN 251 ++ G LG AFQ+ DDV+D E GK G D R G TLP++ A GT R + Sbjct: 218 MERLGRILGTAFQISDDVIDIASPAVESGKTPGTDLREGVRTLPMLFALADEGTDVRLRE 277 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + ++++A ++RE L Y +A+ L LPD + +L Sbjct: 278 LLAGPLEHDA----DVEEALKLLRECDGLTRARRTLDEYAAEARTELAALPDVPARDALA 333 Query: 312 EVVDFCLQR 320 +V++ + R Sbjct: 334 TLVEYVVAR 342 >gi|226294533|gb|EEH49953.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides brasiliensis Pb18] Length = 374 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/278 (34%), Positives = 145/278 (52%), Gaps = 23/278 (8%) Query: 58 EYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112 + +GD ++L LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDF Sbjct: 103 QVQGDGNILPSQRRLAEITEVIHTASLLHDDVIDNAVTRRSSVSANLEFGNKMAVLAGDF 162 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED----------YL 162 LL +A + + E +E ++ V L EGE QL +N ++ EE+ YL Sbjct: 163 LLGRASVALARLRDPEVIELVATVIANLIEGEFMQL---RNTELDEENPFFTEEAITYYL 219 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 K+A L S + ++L+ V +A SYG NLG+AFQLVDD+LDY E+G Sbjct: 220 QKTYLKSASLISKSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLDYTISGEELG 279 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282 K G D + G T P++ A++ + + +G + + A I+ ++ L Sbjct: 280 KPAGADLKLGLATAPLLFAWRGNPELGALVGRKFRREGDVQL-----ARQIVAQSDGLEQ 334 Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 T A Y KA +S+ LPDS K L+E+ QR Sbjct: 335 TRALAQEYTDKAIESISILPDSEAKAGLIEMCAKLTQR 372 >gi|295398947|ref|ZP_06808929.1| heptaprenyl diphosphate synthase component II [Geobacillus thermoglucosidasius C56-YS93] gi|312110446|ref|YP_003988762.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y4.1MC1] gi|294978413|gb|EFG54009.1| heptaprenyl diphosphate synthase component II [Geobacillus thermoglucosidasius C56-YS93] gi|311215547|gb|ADP74151.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y4.1MC1] Length = 321 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 85/310 (27%), Positives = 159/310 (51%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ V + + + SD + + +L+ +GGKR+RP+ L A Y + +A A Sbjct: 13 DLRAVEKELEETVRSDYAQLSEAALHLLQAGGKRIRPVFVLLAAKFGTYDIERVKHVAVA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD++ +++ ++ ++ A Sbjct: 73 LELIHMASLVHDDVIDDAELRRGRQTIKAKWSNRFAMYAGDYMFARSLELMTRLENPLAH 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ + GE+ Q+ D YL IK KTA+L +A+ ++ ++ A Sbjct: 133 RILANTIVEVCRGEIEQIKDKYRFDQNLRCYLRRIKRKTALLIAASCQLGAIAANAAKRT 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L +G +G++FQ+ DD+LD+ G ++GK G D G TLPV+ A + RE+ Sbjct: 193 ADRLYLFGYYVGMSFQITDDILDFTGTEAQLGKPAGSDLLQGNVTLPVLFAMEDERVRER 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + K + + +K+ ++++ A+ + + Y QKA L LP + + +L Sbjct: 253 I---TAAVHPKTTPDEMKEIIALIKQTDAIEKSYALSDRYLQKAFRVLETLPKNKARSTL 309 Query: 311 MEVVDFCLQR 320 ++ + +R Sbjct: 310 YDIAKYIGKR 319 >gi|150401609|ref|YP_001325375.1| polyprenyl synthetase [Methanococcus aeolicus Nankai-3] gi|150014312|gb|ABR56763.1| Polyprenyl synthetase [Methanococcus aeolicus Nankai-3] Length = 320 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 86/292 (29%), Positives = 157/292 (53%), Gaps = 8/292 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 K+L+F+GGKR+RP L++ T L+ + D + A ++E IH +L+HDD++D+ + RRGK Sbjct: 31 KHLLFAGGKRIRPYLSVLTYLLKKDDIDEVLTPAVSVELIHGYSLIHDDIMDNDSERRGK 90 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACTLAEGELRQLSL 150 +V+G ++L GD L + AF + + K+ E L+ +S + + EG+ + Sbjct: 91 PTVHIVYGEPIAILAGDLLNTLAFNAISQMENLEKAHEILKIVSKASVKVCEGQATDMEF 150 Query: 151 -SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + T ++Y +I KT L A +E+ +++A R+A+ Y +G+ FQ+ D Sbjct: 151 EEREVIPTIDEYFDMISKKTGALIVAPIEIGAVMADFTEEERKAICEYAKRIGMTFQIQD 210 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 DVLD G+ N +GK +G D GK T+ V+ A Q + EK + + + + E +K+ Sbjct: 211 DVLDLIGDKNTIGKPVGSDIVEGKKTIMVLHALQTLPEPEKQRFLKILGNSNATDEEIKE 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++ + + + +AKD L+ D +K L + +F ++R+ Sbjct: 271 AIEMLGPSINYAKDIMKTATI--EAKDYLKIF-DEEKRKRLENIAEFIIERV 319 >gi|42780715|ref|NP_977962.1| heptaprenyl diphosphate synthase component II [Bacillus cereus ATCC 10987] gi|42736635|gb|AAS40570.1| heptaprenyl diphosphate synthase component II [Bacillus cereus ATCC 10987] Length = 320 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/303 (30%), Positives = 158/303 (52%), Gaps = 10/303 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 K + S+ ++ + LI +GGKR+RP+ L +Y+ D +A A+E IH A+L+ Sbjct: 23 KTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELIHMASLV 82 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + LRRG WG++ ++ GD+L +++ + + EA +ALS + Sbjct: 83 HDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTILEV 142 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +GE+ Q+ + D YL IK KTA+L +A+ ++ ++ AG L YG Sbjct: 143 CKGEIEQIKDKYDYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYF 202 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT--KREKNFWKSTIN 258 +G+++Q++DD+LD+ ++GK G D G TLP + A + K+ K+ ++T Sbjct: 203 VGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDPVLCKKIKSVHENTTA 262 Query: 259 DG-KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 D K +E +K + I ++A +E Y KA + ++ LP K +L V + Sbjct: 263 DEMKEIIEAVKNSDAI---DKAFAFSE----RYLHKALEIIKPLPRGQAKYALQNVAKYI 315 Query: 318 LQR 320 +R Sbjct: 316 GKR 318 >gi|48478271|ref|YP_023977.1| farnesyl pyrophosphate synthetase/ geranyltransferase/farnesyltransferase/hexaprenyl diphosphate synthase [Picrophilus torridus DSM 9790] gi|48430919|gb|AAT43784.1| farnesyl pyrophosphate synthetase/ geranyltransferase/farnesyltransferase/hexaprenyl diphosphate synthase [Picrophilus torridus DSM 9790] Length = 328 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 165/314 (52%), Gaps = 12/314 (3%) Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIE 72 ++N +L I +D + + D+ +Y I +GGKR RP+LT+ + + +L LA E Sbjct: 17 EINQRLLDSIQTDEKYLYDMARYTIEAGGKRFRPLLTILSFEIASGESYEKILDLAAGYE 76 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 IHTA+L+HDD++D S +RRG+ G +++VGD+L ++A+ + +E + Sbjct: 77 LIHTASLIHDDIIDHSDMRRGRYTLSYKEGINNAIVVGDYLFAKAYELG-SRYGKEVSKI 135 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 ++ + LAEG++ + NL++ EE YL +I++KTA F+A ++ AG + Sbjct: 136 MADASSNLAEGQILEAENIGNLNMNEETYLKIIENKTARFFAACALGATKAAGADFEISN 195 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L ++ N+G+AFQ+ DD+LD G +MGK D + TLP+I + + N+ Sbjct: 196 RLSNFAYNMGMAFQITDDILDIIGNEKDMGKPAMVDLGHDVITLPIIYSLK------NNY 249 Query: 253 WKSTIND---GKISVENLKKAFI-IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + + I D G +LK F IM E A+ + A Y K+ L + S Sbjct: 250 YNNKIRDILTGNYKSPDLKDKFKNIMMETGAIEYSFKVAKDYINKSVSYLSGIGRSRDLD 309 Query: 309 SLMEVVDFCLQRLN 322 LME+ ++R++ Sbjct: 310 LLMELAMIVIERID 323 >gi|326798537|ref|YP_004316356.1| trans-hexaprenyltranstransferase [Sphingobacterium sp. 21] gi|326549301|gb|ADZ77686.1| Trans-hexaprenyltranstransferase [Sphingobacterium sp. 21] Length = 323 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 8/299 (2%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S V ++ + Y++ GK++RPM A ++ A +E +HTATL+HDDV Sbjct: 28 SSVPLLDRITHYIVKRKGKQMRPMFVFFAAGACGGINESTHRGAALVELVHTATLVHDDV 87 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VD+S RRG + +W N+ +VLVGDFLLS+ + ++ + E L L+ ++EGE Sbjct: 88 VDNSYQRRGFFSVNALWKNKIAVLVGDFLLSKGLSLSVKNQDFEFLRILNEAVTEMSEGE 147 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ ++ LD+ E Y VI+ KTA L ++ + + + + +G +GIA Sbjct: 148 LLQMEKARRLDIDEGVYFEVIRQKTASLIASCCACGAASTNAPSELVTKMHDFGEKVGIA 207 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ + +++GK +G D + K TLP+I A +K +K ++ IN K Sbjct: 208 FQI--KDDLFDFGFDDVGKPLGIDIKEKKLTLPLIYALNNTSKEKK---RTIINLVKNHN 262 Query: 265 ENLKKAFIIM---RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E+ KK ++ R + L + SY +A + L P+S +K L ++V F +R Sbjct: 263 EDQKKVMEVIEFVRNSGGLAYAREKMLSYQAEAFNILEAFPESEYKTGLEQLVRFTTER 321 >gi|317969726|ref|ZP_07971116.1| solanesyl diphosphate synthase [Synechococcus sp. CB0205] Length = 323 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/292 (31%), Positives = 153/292 (52%), Gaps = 8/292 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L +G+ H LA E IHTA+L+HDDVVD+++ Sbjct: 36 AAEHLFSAGGKRLRPGIVLLISRALAPQGELTSRHRRLAEITEMIHTASLVHDDVVDEAS 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + ++ +VL GDFL +QA + + E ++ LS V LA+GE++Q Sbjct: 96 TRRGVDTVHSRFNHRVAVLAGDFLFAQASWHLANLDNLEVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E YL KTA L + + + +++G+ L +G LG+AFQ+VD Sbjct: 156 YRYDTGQSFETYLEKSYCKTASLIANSARAAGVLSGLPEDQLDCLYRFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T P + A + + DG +L + Sbjct: 216 DILDFTGSDQQLGKPAASDLASGYLTAPALYALEERPALAGLIEREFNQDG-----DLAQ 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++R + A+ + A ++ +A ++L LP S + +L+E+ +F L RL Sbjct: 271 ALELVRGSEAIQRSRTLAETFANEAYEALSFLPPSDCRTALLELPEFVLSRL 322 >gi|283457457|ref|YP_003362034.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18] gi|283133449|dbj|BAI64214.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18] Length = 353 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 152/289 (52%), Gaps = 5/289 (1%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 ++L+ +GGKR+RP+L L +A + D + A +E H ATL HDDV+DD+ RRG Sbjct: 65 RHLLSAGGKRVRPLLALLSAAVDGEINDEVIEAAVVVELTHLATLYHDDVMDDAPKRRGV 124 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 +A+++WGN ++L GD + S+A +V E ++ ++ S L G+L + + + Sbjct: 125 DSAQMIWGNSVAILTGDLIFSRASLLVSELGTRP-MKIQSQTFERLVLGQLFETTGPREG 183 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 + Y+ VI+ KT L +AA E SL++G V +K+YG +G+AFQL DDV+D Sbjct: 184 QDLLDHYIAVIEGKTGSLIAAAGEYGSLLSGASEEVISMVKAYGELVGVAFQLADDVIDI 243 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVIL---AFQRGTKREKNFWKSTINDGKISVENLKKAF 271 + GK G D R G PTLP IL A G + + ++ ++ S E L+ A Sbjct: 244 VSDGKTSGKTRGTDLREGVPTLPTILLDRAVAAGDESAVSV-RALLDADLSSDEALETAV 302 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + + AY + +A ++ LP+S+ K +L + R Sbjct: 303 EALAAHPVTQEAWQIAYDWADRAIAAIAPLPESTAKAALESFAHAVVHR 351 >gi|289550751|ref|YP_003471655.1| Heptaprenyl diphosphate synthase component II [Staphylococcus lugdunensis HKU09-01] gi|289180283|gb|ADC87528.1| Heptaprenyl diphosphate synthase component II [Staphylococcus lugdunensis HKU09-01] Length = 318 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 88/264 (33%), Positives = 143/264 (54%), Gaps = 8/264 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLAC 69 +++KVN L+ + I S+ ++ + +L+ SGGKR+RP + L++ + ++ +A Sbjct: 9 EIKKVNNLLEQIIKSNDTVLEEASLHLLSSGGKRVRPAFVILSSQFGKSKQSEDTYKVAV 68 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+ + E Sbjct: 69 ALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQTTAILTGNFLLALGLEQLSEVNHPRI 128 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +S + GEL Q N + T +YL I KTA+L A EV +L + Sbjct: 129 HTIISTSIVDVCRGELFQFQDQFNSNQTISNYLRRINRKTALLIQLATEVGALTSNASQQ 188 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 LK G +G++FQ++DD+LD+ N++GK +G D NG TLPV+L +R ++ Sbjct: 189 TVYKLKMIGHYIGMSFQIIDDILDFTSSENKLGKPVGSDLMNGHITLPVLLEMRRNSQ-- 246 Query: 250 KNFWKSTINDGKISVENLKKAFII 273 +K I D ++ E+ K+ F I Sbjct: 247 ---FKKKITD--LTSESPKEHFEI 265 >gi|291236349|ref|XP_002738102.1| PREDICTED: PDSS1 protein-like [Saccoglossus kowalevskii] Length = 403 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/322 (29%), Positives = 157/322 (48%), Gaps = 12/322 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----- 61 LT ++ +V I K + + + ++ YL GK RPM L +A Y Sbjct: 86 LTESELSQVCTNIKKELNTSKHNLNEISHYLFDGKGKAFRPMTVLLSAKACNYHSGLSTQ 145 Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 + +A E IHTA+L+HDDV+D + RRGK A +WG + ++LVGDF+LS++ Sbjct: 146 VTQSQREVAMIAEMIHTASLIHDDVIDAADTRRGKAAVNEIWGQKNAILVGDFILSKSSA 205 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ ++E + +S L GE QL ++ + YL KTA L + + + Sbjct: 206 LLARIGNKEVVIVISQAIDDLVRGEFMQLGSKEDENERFAHYLQKTYKKTASLIANSCKA 265 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+++G ++ + YG N+GIAFQLVDD+LDY MGK D + G T PV+ Sbjct: 266 VSILSGCNPAIVEITYQYGRNMGIAFQLVDDMLDYISSDTVMGKPTSTDLKLGLATSPVL 325 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G +++KA ++ E + T Y A Y +A + Sbjct: 326 FACQQYPELNALIMRRFSEPG-----DVEKARRLVAETDGIQQTRYLAQQYCNEAIKQIS 380 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 L +S +K+L+ + L R+ Sbjct: 381 GLAESPARKALVTLTHKILNRI 402 >gi|269794087|ref|YP_003313542.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM 10542] gi|269096272|gb|ACZ20708.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM 10542] Length = 337 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 6/291 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 ++L+ +GGKRLRP+L L TA + E + A +E H ATL HDDV+D + LRRG Sbjct: 46 RHLVDAGGKRLRPLLALLTAELGESARPEVIDAAVVVELTHLATLYHDDVMDSAPLRRGA 105 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 AA VWGN ++L GD L ++A + + EA+ + L G+L + + Sbjct: 106 PAAHEVWGNSVAILTGDLLFARA-SVTVAGLGPEAVRWQAETFERLCLGQLHETVGPRPD 164 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 + + YL V+ KTA L + + + AG + + + + ++G +G+AFQL DDV+D Sbjct: 165 EDPVQHYLQVLSDKTASLIATSARFGARYAGCRPEIVEIVANFGEKVGVAFQLADDVIDL 224 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK-----STINDGKISVENLKK 269 + GK G D R G PT+PV+L ++ ++ S E L Sbjct: 225 TSDGALTGKTPGTDLREGVPTMPVLLLRSHVAASDEPSAGDLALLELLDSDLTSDEALAG 284 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A +R++ + +T +A ++ Q A L LPD K +L+ + + R Sbjct: 285 AVAALRDHPVVAETRAQAVAWAQDAVAELVPLPDGPVKDALVAFAESLVDR 335 >gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 293 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 89/269 (33%), Positives = 149/269 (55%), Gaps = 15/269 (5%) Query: 3 MLEDLTLKDMEKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M +D+ ++ +E +N + K + D E++ D ++Y +F+GGKRLRP+L +++ ++ Sbjct: 1 MFDDILMEKIEYINNGLNKLLDIDDKPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGD 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 D+ + +ACAIEFIHT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ F Sbjct: 61 RDDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGF 120 Query: 119 CMVIE-----TKSQEALEALSLVA----C-TLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168 ++I Q L A +A C + G++ L LS+N ++TEE+ + K Sbjct: 121 EVLIHHALDSANCQNILRATEEIAHAAGCHGMIGGQVVDL-LSENKNITEEELKFMHDHK 179 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 T L A++ +++ G + + L Y +G+AFQ+ DD+LD G+ +++GKN+ D Sbjct: 180 TGALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESKLGKNVKSD 239 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTI 257 NGK T + QR K S I Sbjct: 240 LENGKSTFVSVFGLQRSISLVKELTASAI 268 >gi|332294868|ref|YP_004436791.1| Trans-hexaprenyltranstransferase [Thermodesulfobium narugense DSM 14796] gi|332177971|gb|AEE13660.1| Trans-hexaprenyltranstransferase [Thermodesulfobium narugense DSM 14796] Length = 314 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 103/319 (32%), Positives = 182/319 (57%), Gaps = 15/319 (4%) Query: 7 LTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 L LK K++ + L RI ++VE + + +L+ +GGKR+RP L +AL + + + Sbjct: 8 LELKSHIKLSEIELARILETEVETLRNASLHLLEAGGKRIRPTLVFLSALCVNQDIEKVI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A +E IH ATL+HDDV+D+S +RRG ++ +G + ++L GDF+L++ + + Sbjct: 68 KYAAVVEGIHLATLIHDDVIDESNVRRGILSVNGKYGFKVAILSGDFILAKITHFLSLLE 127 Query: 126 SQEALEALSLVACTLAEGE-LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 ++E + ++ V +AEGE ++Q L K + + E Y+ +KTA L S++ + S+ Sbjct: 128 NKEPVRLMAEVIMRMAEGEVMQQEDLFKIVSI--ERYIIRCTNKTARLISSSAFLGSI-- 183 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V + R +G+NLGIAFQ++DD+LD+ GEV ++GK G D R+G TLPV+L ++ Sbjct: 184 DVLDK-RNIFAEFGLNLGIAFQIIDDILDFTGEVKKLGKVPGSDLRSGVVTLPVLLLSKK 242 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-D 303 + EK + DG + K +++ + L ++ A Y KA + L+ L + Sbjct: 243 SREVEK-LLEKKFEDG------INKIIEMVKNDNVLKESVDLAKYYSNKAIECLKELKIN 295 Query: 304 SSWKKSLMEVVDFCLQRLN 322 + + K+LM+ V +R++ Sbjct: 296 NIYAKTLMDYVKMLEERVS 314 >gi|195452852|ref|XP_002073528.1| GK13098 [Drosophila willistoni] gi|194169613|gb|EDW84514.1| GK13098 [Drosophila willistoni] Length = 449 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/299 (30%), Positives = 153/299 (51%), Gaps = 14/299 (4%) Query: 32 DVVKYLIFSG-GKRLRPMLTLATALMLEYRGDN--HVL------LACAIEFIHTATLLHD 82 D + F G GK LRPM+T+ A + Y +N H L +A E +H+A+L+HD Sbjct: 155 DTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALFSEMVHSASLVHD 214 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D S RRGK + +W ++ + GD++LS A M+ +S + LS + L + Sbjct: 215 DVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIVLSKILTDLVQ 274 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE QL + + YL KTA L + AL+ +++IA ++V + YG N+G Sbjct: 275 GEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAELAFQYGRNIG 334 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQLVDD+LD+ +MGK D + G T PV+ A ++ + + G Sbjct: 335 LAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELNPMVMRRFSEPG-- 392 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++++AF ++ ++ L T + A + +A + L +S ++K L V D + R+ Sbjct: 393 ---DVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKGLQVVADLVINRM 448 >gi|57641403|ref|YP_183881.1| bifunctional short-chain isoprenyl diphosphate synthase [Thermococcus kodakarensis KOD1] gi|37999032|dbj|BAD00093.1| isoprenyl diphosphate synthase [Thermococcus kodakaraensis] gi|57159727|dbj|BAD85657.1| bifunctional short-chain isoprenyl diphosphate synthase [Thermococcus kodakarensis KOD1] Length = 343 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 165/334 (49%), Gaps = 30/334 (8%) Query: 17 FLILKRICSDV-----EMIPD--------VVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 F +K DV E++P+ ++ +GGKR+RP + L A + + Sbjct: 8 FARIKEKAKDVDRVILELVPEKEPLELYKAARHYPLAGGKRVRPFVVLRAAEAVGGDPEK 67 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----- 118 + A ++EFIH +L+HDD++D LRRG+ +WG ++L GD L S+AF Sbjct: 68 ALYPAASVEFIHNYSLVHDDIMDMDELRRGRPTVHKLWGVNMAILAGDLLFSKAFEAIAK 127 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 V K L+ L + L EG+ + +VT E+YL +I KT LF + E Sbjct: 128 AEVPAEKKARILDVLVRTSNLLCEGQALDIEFETKEEVTVEEYLKMISGKTGALFQGSAE 187 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + +++ AL +GMN+GIAFQ+ DDVLD + ++GK +G D R GK TL V Sbjct: 188 IGAIVGTEDEEYIGALSKWGMNVGIAFQIWDDVLDLIADEEKLGKPVGSDIRKGKKTLIV 247 Query: 239 ILAFQRGTKREK--------NFWKSTINDGKISVENLK----KAFIIMRENRALVDTEYR 286 F+ ++ +K + D I EN+K KA ++++ ++ Sbjct: 248 SHFFEHASEEDKAEFLKVFGKYAGDAKGDALIHDENVKEEVAKAIELLKKYGSIDYAANY 307 Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A + ++A ++L+ LP+S ++ L + +F ++R Sbjct: 308 AKNLIREANEALKVLPESEARRDLELLAEFLVER 341 >gi|225461848|ref|XP_002285665.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 421 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/291 (31%), Positives = 162/291 (55%), Gaps = 15/291 (5%) Query: 40 SGGKRLRPMLTL----ATALM--LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +GGKR+RP L ATA + L+ H LA IE IHTA+L+HDDV+D+S +RRG Sbjct: 138 AGGKRMRPALVFLVSRATAEIAGLKDLTIKHRRLAEIIEMIHTASLIHDDVLDESDMRRG 197 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K ++G + +VL GDF+ +Q+ + ++ E ++ +S V A GE++Q S Sbjct: 198 KETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQ--ASSL 255 Query: 154 LDVTEEDYLHVIKS--KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 D E +++KS KTA L +A+ + +++ +GV +++ + + YG NLG++FQ+VDD+ Sbjct: 256 FDCELELEEYLLKSFYKTASLIAASTKGAAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDI 315 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ ++GK G D G T PVI A ++ K + + +L +A Sbjct: 316 LDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPK-----LREIVESEFCEAGSLNEAI 370 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +++ + + A A +L+CLP S+++ +L ++V + L+R++ Sbjct: 371 KLVKSCGGIEKAQDLAKQKADLAIQNLQCLPQSAFRLALEKMVKYNLERID 421 >gi|147844134|emb|CAN80568.1| hypothetical protein VITISV_004505 [Vitis vinifera] Length = 421 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/291 (31%), Positives = 162/291 (55%), Gaps = 15/291 (5%) Query: 40 SGGKRLRPMLTL----ATALM--LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +GGKR+RP L ATA + L+ H LA IE IHTA+L+HDDV+D+S +RRG Sbjct: 138 AGGKRMRPALVFLVSRATAEIAGLKDLTIKHRRLAEIIEMIHTASLIHDDVLDESDMRRG 197 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K ++G + +VL GDF+ +Q+ + ++ E ++ +S V A GE++Q S Sbjct: 198 KETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQ--ASSL 255 Query: 154 LDVTEEDYLHVIKS--KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 D E +++KS KTA L +A+ + +++ +GV +++ + + YG NLG++FQ+VDD+ Sbjct: 256 FDCELELEEYLLKSFYKTASLIAASTKGAAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDI 315 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ ++GK G D G T PVI A ++ K + + +L +A Sbjct: 316 LDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPK-----LREIVESEFCEAGSLNEAI 370 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +++ + + A A +L+CLP S+++ +L ++V + L+R++ Sbjct: 371 KLVKSCGGIEKAQDLAKQKADLAIQNLQCLPQSAFRLALEKMVKYNLERID 421 >gi|126695982|ref|YP_001090868.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9301] gi|126543025|gb|ABO17267.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9301] Length = 323 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 163/292 (55%), Gaps = 12/292 (4%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKRLRP +L ++ A+ E+ H LA E IHTA+L+HDDVVD+++ R Sbjct: 38 EHLFSAGGKRLRPGIVLLISKAISPEFCLTTKHKRLAEITEMIHTASLVHDDVVDEASTR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG + + +VL GDFL +QA + + ++ LS V LAEGE++Q +L+ Sbjct: 98 RGVDTVHSRFNTRVAVLAGDFLFAQASWHLANLDNVNVVKLLSRVIMDLAEGEIKQ-NLN 156 Query: 152 KNLDVTEEDYLHVIKS--KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + D + ++ KS KTA L + + + + +++G+ + +L +G N+G+AFQ+VD Sbjct: 157 R-FDSAQSFPKYINKSYCKTASLIANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T PV+ A + E IN ++L Sbjct: 216 DILDFTGNDKQLGKPAVSDLASGYLTAPVLYALE-----ENKQLSVLINRELAEKDDLDN 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A I+ ++A+ + A + +K+++ LPDS +K++LM + +F L R+ Sbjct: 271 ALNIIMNSKAIESSRKLAEDFAMLSKEAIVWLPDSEYKRALMALPEFVLSRI 322 >gi|302142790|emb|CBI20085.3| unnamed protein product [Vitis vinifera] Length = 420 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/291 (31%), Positives = 162/291 (55%), Gaps = 15/291 (5%) Query: 40 SGGKRLRPMLTL----ATALM--LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +GGKR+RP L ATA + L+ H LA IE IHTA+L+HDDV+D+S +RRG Sbjct: 137 AGGKRMRPALVFLVSRATAEIAGLKDLTIKHRRLAEIIEMIHTASLIHDDVLDESDMRRG 196 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K ++G + +VL GDF+ +Q+ + ++ E ++ +S V A GE++Q S Sbjct: 197 KETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQ--ASSL 254 Query: 154 LDVTEEDYLHVIKS--KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 D E +++KS KTA L +A+ + +++ +GV +++ + + YG NLG++FQ+VDD+ Sbjct: 255 FDCELELEEYLLKSFYKTASLIAASTKGAAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDI 314 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ ++GK G D G T PVI A ++ K + + +L +A Sbjct: 315 LDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPK-----LREIVESEFCEAGSLNEAI 369 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +++ + + A A +L+CLP S+++ +L ++V + L+R++ Sbjct: 370 KLVKSCGGIEKAQDLAKQKADLAIQNLQCLPQSAFRLALEKMVKYNLERID 420 >gi|45644728|gb|AAS73116.1| predicted geranylgeranyl pyrophosphate synthase [uncultured marine gamma proteobacterium EBAC20E09] Length = 314 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 86/303 (28%), Positives = 160/303 (52%), Gaps = 9/303 (2%) Query: 21 KRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 K I SD+ + I + Y+ S GK++R L L + + + LA IE +HTA Sbjct: 16 KLIKSDINKEKTILGLYNYIFKSDGKKIRSRLNLIASS--SSKNSDRYKLASIIELLHTA 73 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TL+HDDVVD+++ RRG ++ +W N VL+GD++ S+AF +++E + L L+ Sbjct: 74 TLVHDDVVDNASTRRGAISVNSLWSNAHGVLIGDYIYSKAFMLMVEIGKTDILAELADAT 133 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 +++GEL QL N+ ++ + KT LF A+ + +++AG + + + Sbjct: 134 NDISQGELIQLDAISNIKISLNKLKKISYFKTGRLFEASAKTGAMLAGANKNFIKNISES 193 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 N+GI FQ+ DD+LDY ++ GK +D + GK T P A + +++EK S + Sbjct: 194 AKNIGILFQIKDDLLDYSNS-SKTGKQSFQDLKEGKITYPFFFALKNSSQKEKKQLISFL 252 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 + ++ N KKA ++ + L+ T+ A + + ++ + + + ++ ++E+ + Sbjct: 253 GNKRL---NEKKALALISKLNGLIKTQQLAEKFYTSSINTAKTINNQFIRQEMIELANIA 309 Query: 318 LQR 320 L R Sbjct: 310 LNR 312 >gi|194741958|ref|XP_001953476.1| GF17201 [Drosophila ananassae] gi|190626513|gb|EDV42037.1| GF17201 [Drosophila ananassae] Length = 441 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/299 (30%), Positives = 154/299 (51%), Gaps = 14/299 (4%) Query: 32 DVVKYLIFSG-GKRLRPMLTLATALMLEYR--GDNHVL------LACAIEFIHTATLLHD 82 D + F G GK LRPM+T+ A + Y ++H L +A E +H+A+L+HD Sbjct: 147 DTIASYYFDGQGKALRPMVTMLMAKAINYHLNKESHQLVHKQRQIALFSEMVHSASLVHD 206 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D S RRGK + +W ++ + GD++LS A M+ +S + LS + L + Sbjct: 207 DVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSVASIMIARLRSDDVTIVLSQILTDLVQ 266 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE QL + + YL KTA L + AL+ +++IA +++V + YG N+G Sbjct: 267 GEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQAEDNVAELAFQYGRNIG 326 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQLVDD+LD+ +MGK D + G T PV+ A ++ + + G Sbjct: 327 LAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELNPMVMRRFSEPG-- 384 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++++AF ++ ++ L T + A + +A + L +S ++K L V D + R+ Sbjct: 385 ---DVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKGLQVVADLVINRM 440 >gi|145596562|ref|YP_001160859.1| polyprenyl synthetase [Salinispora tropica CNB-440] gi|145305899|gb|ABP56481.1| Polyprenyl synthetase [Salinispora tropica CNB-440] Length = 356 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 11/323 (3%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L D + +E V + + S + + ++L+ +GGKR RP+L A + + Sbjct: 37 LPDSAFRVLEGVEAALRADVASADPFVTEAARHLLDAGGKRFRPLLVALGAQFGDPTREQ 96 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 V A +E H ATL HDDV+D++ +RRG +A W N ++LVGD+L F + Sbjct: 97 VVPAAVVVELTHLATLYHDDVMDEAPVRRGAPSANSRWTNSVAILVGDYL----FARAAD 152 Query: 124 TKSQEALEALSLVACTLA---EGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + EA+ L A T A G++ + + +D +LHVI KT L + A Sbjct: 153 ISADLGTEAVRLQARTFARLVHGQIAETVGPRPGVDPVAH-HLHVIAEKTGSLIATAARF 211 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + +G + QAL YG +G+AFQL DD+LD E GK G D R G PTLPV+ Sbjct: 212 GGMFSGASPTHTQALAGYGEAIGVAFQLSDDLLDISSEAERSGKTPGTDLREGVPTLPVL 271 Query: 240 LAFQRGTKREKNF-WKSTINDGKISVENLK-KAFIIMRENRALVDTEYRAYSYGQKAKDS 297 A + + + G ++ + L +A ++RE+ AL S ++A+ Sbjct: 272 YALASDDADAASVRLREVLAVGPLTDDELHAEALGLLRESPALKRARETVRSRAEEARAQ 331 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L LP + +L + D R Sbjct: 332 LAPLPPGPARHALESLCDQIADR 354 >gi|315658247|ref|ZP_07911119.1| heptaprenyl diphosphate synthase [Staphylococcus lugdunensis M23590] gi|315496576|gb|EFU84899.1| heptaprenyl diphosphate synthase [Staphylococcus lugdunensis M23590] Length = 335 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 88/264 (33%), Positives = 143/264 (54%), Gaps = 8/264 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLAC 69 +++KVN L+ + I S+ ++ + +L+ SGGKR+RP + L++ + ++ +A Sbjct: 26 EIKKVNNLLEQIIKSNDTVLEEASLHLLSSGGKRVRPAFVILSSQFGKSKQSEDTYKVAV 85 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+ + E Sbjct: 86 ALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQTTAILTGNFLLALGLEQLSEVNHPRI 145 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +S + GEL Q N + T +YL I KTA+L A EV +L + Sbjct: 146 HTIISTSIVDVCRGELFQFQDQFNSNQTISNYLRRINRKTALLIQLATEVGALTSNASQQ 205 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 LK G +G++FQ++DD+LD+ N++GK +G D NG TLPV+L +R ++ Sbjct: 206 TVYKLKMIGHYIGMSFQIIDDILDFTSSENKLGKPVGSDLMNGHITLPVLLEMRRNSQ-- 263 Query: 250 KNFWKSTINDGKISVENLKKAFII 273 +K I D ++ E+ K+ F I Sbjct: 264 ---FKKKITD--LTSESPKEHFEI 282 >gi|91070262|gb|ABE11181.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone HF10-11H7] Length = 323 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 164/292 (56%), Gaps = 12/292 (4%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKRLRP +L ++ A+ E+ H LA E IHTA+L+HDDVVD+++ R Sbjct: 38 EHLFSAGGKRLRPGIVLLISKAISPEFCLTTKHKRLAEITEMIHTASLVHDDVVDEASTR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG + + +VL GDFL +QA + + ++ LS V LAEGE++Q +L+ Sbjct: 98 RGVDTVHSRFNTRVAVLAGDFLFAQASWHLANLDNVNVVKLLSRVIMDLAEGEIKQ-NLN 156 Query: 152 KNLDVTEEDYLHVIKS--KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + D + ++ KS KTA L + + + + +++G+ + +L +G N+G+AFQ+VD Sbjct: 157 R-FDSAQSFSKYINKSYCKTASLIANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T PV+ A + E IN ++L+ Sbjct: 216 DILDFTGNDKQLGKPAVSDLASGYLTAPVLYALE-----ENKQLSVLINRELAEKDDLED 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A I+ ++A+ + A + +K+++ LPDS +K++LM + +F L R+ Sbjct: 271 ALNIIMNSKAIESSRKLAEDFAMLSKEAIVWLPDSEYKRALMALPEFVLGRI 322 >gi|228990628|ref|ZP_04150593.1| Heptaprenyl diphosphate synthase component 2 [Bacillus pseudomycoides DSM 12442] gi|228996726|ref|ZP_04156363.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides Rock3-17] gi|228763045|gb|EEM11955.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides Rock3-17] gi|228769154|gb|EEM17752.1| Heptaprenyl diphosphate synthase component 2 [Bacillus pseudomycoides DSM 12442] Length = 320 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/318 (28%), Positives = 163/318 (51%), Gaps = 17/318 (5%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D+ K+++KV + S+ ++I D LI +GGKR+RP+ L +Y+ D Sbjct: 15 DVIEKELKKV-------VASEQQLIEDAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIK 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A+E IH A+L+HDDV+D + LRR WG++ ++ GD+L +++ + + Sbjct: 68 HVAVALELIHMASLVHDDVIDAALLRRSSATVNAKWGDRIAMYTGDYLFAKSLECITNLE 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 EA +ALS + +GE+ Q+ + + YL IK KTA+L +A+ ++ ++ +G Sbjct: 128 VPEAHQALSYTILEVCKGEIEQIKDKYDYNQNLRTYLRRIKRKTALLIAASCQLGAIASG 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 L YG +G+++Q++DD+LD+ ++GK G D G TLP + A + Sbjct: 188 ASRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNVTLPALYAMEDP 247 Query: 246 TKREK---NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 R K +T ++ K + ++K + I +RA +E Y KA + ++ LP Sbjct: 248 KLRAKIVSVHENTTASEMKEIIHDIKTSPAI---DRAFAFSE----RYLHKALEVIKPLP 300 Query: 303 DSSWKKSLMEVVDFCLQR 320 K +L V + +R Sbjct: 301 RGQAKYALQNVAKYIGKR 318 >gi|330997298|ref|ZP_08321151.1| putative octaprenyl pyrophosphate synthetase [Paraprevotella xylaniphila YIT 11841] gi|329571093|gb|EGG52800.1| putative octaprenyl pyrophosphate synthetase [Paraprevotella xylaniphila YIT 11841] Length = 323 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 131/224 (58%), Gaps = 7/224 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +++++ GK +RP+LTL A D+ + A ++E +HTA+L+HDDVVD+S +RRG Sbjct: 37 LRHVLSRKGKLMRPILTLLAAKKYGEINDSVLHAAVSLEMLHTASLVHDDVVDESGVRRG 96 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 + + + N+ +VLVGD+LLS A ++ ++ + TL++GEL+QLS K+ Sbjct: 97 QSSVNALLDNKAAVLVGDYLLSTALKHAAMAGDLRVVDLVARLGQTLSDGELQQLSNVKS 156 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 +++E Y VI+ KTA LF+ EV +L++G + L +G +GI FQ+ DDV D Sbjct: 157 DEISENQYFEVIRRKTASLFAVCAEVGALLSGASENEILRLGEFGTYVGICFQIRDDVFD 216 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA-FQRGTKREKNFWKST 256 Y E+GK G D + GK TLPV+ A Q G + W T Sbjct: 217 YYDA--EVGKPTGNDMKEGKLTLPVVHAVLQPGAET----WHET 254 >gi|167764761|ref|ZP_02436882.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC 43183] gi|167697430|gb|EDS14009.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC 43183] Length = 324 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 7/231 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA 89 D V Y++ GGKR+RP+L L + Y+ D + A IE H TLLHDD++D + Sbjct: 29 DPVAYVLSMGGKRIRPVLMLMAYNL--YKEDVRPVFSPATGIEVYHNYTLLHDDLMDRAD 86 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAEGELR 146 RRGK VW + T++L GD +L A+ + + ++ ++ SL A + EG+ Sbjct: 87 KRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAQCPAEHLKAVMDLFSLTALEICEGQQM 146 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + DV EE+YL +I+ KT+VL +A+L++ +L+ G + L +GMN+G+AFQ Sbjct: 147 DMDFEQRSDVKEEEYLEMIRLKTSVLLAASLKIGALLGGASAEDAERLYDFGMNMGVAFQ 206 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 L DD+LD G+ GKNIG D K T +I A + K + K I Sbjct: 207 LKDDLLDVYGDTAVFGKNIGGDILCNKKTYMLIKALEHADKEQATQLKHWI 257 >gi|69248976|ref|ZP_00604834.1| Trans-hexaprenyltranstransferase [Enterococcus faecium DO] gi|257880389|ref|ZP_05660042.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,230,933] gi|257882385|ref|ZP_05662038.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,502] gi|257886155|ref|ZP_05665808.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,501] gi|257891717|ref|ZP_05671370.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,410] gi|257894056|ref|ZP_05673709.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,408] gi|258614163|ref|ZP_05711933.1| heptaprenyl diphosphate synthase, component II, putative [Enterococcus faecium DO] gi|260559354|ref|ZP_05831535.1| trans-hexaprenyltranstransferase [Enterococcus faecium C68] gi|261209112|ref|ZP_05923515.1| trans-hexaprenyltranstransferase [Enterococcus faecium TC 6] gi|289567338|ref|ZP_06447712.1| trans-hexaprenyltranstransferase [Enterococcus faecium D344SRF] gi|293563994|ref|ZP_06678400.1| polyprenyl synthetase [Enterococcus faecium E1162] gi|293568569|ref|ZP_06679887.1| polyprenyl synthetase [Enterococcus faecium E1071] gi|294615036|ref|ZP_06694924.1| polyprenyl synthetase [Enterococcus faecium E1636] gi|294618420|ref|ZP_06697994.1| polyprenyl synthetase [Enterococcus faecium E1679] gi|294622823|ref|ZP_06701775.1| polyprenyl synthetase [Enterococcus faecium U0317] gi|314940477|ref|ZP_07847623.1| polyprenyl synthetase [Enterococcus faecium TX0133a04] gi|314942588|ref|ZP_07849421.1| polyprenyl synthetase [Enterococcus faecium TX0133C] gi|314949713|ref|ZP_07853027.1| polyprenyl synthetase [Enterococcus faecium TX0082] gi|314953265|ref|ZP_07856201.1| polyprenyl synthetase [Enterococcus faecium TX0133A] gi|314992667|ref|ZP_07858080.1| polyprenyl synthetase [Enterococcus faecium TX0133B] gi|314998247|ref|ZP_07863119.1| polyprenyl synthetase [Enterococcus faecium TX0133a01] gi|68194317|gb|EAN08831.1| Trans-hexaprenyltranstransferase [Enterococcus faecium DO] gi|257814617|gb|EEV43375.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,230,933] gi|257818043|gb|EEV45371.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,502] gi|257822011|gb|EEV49141.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,501] gi|257828077|gb|EEV54703.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,410] gi|257830435|gb|EEV57042.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,408] gi|260074453|gb|EEW62774.1| trans-hexaprenyltranstransferase [Enterococcus faecium C68] gi|260076939|gb|EEW64663.1| trans-hexaprenyltranstransferase [Enterococcus faecium TC 6] gi|289160861|gb|EFD08787.1| trans-hexaprenyltranstransferase [Enterococcus faecium D344SRF] gi|291588711|gb|EFF20541.1| polyprenyl synthetase [Enterococcus faecium E1071] gi|291592098|gb|EFF23719.1| polyprenyl synthetase [Enterococcus faecium E1636] gi|291595317|gb|EFF26636.1| polyprenyl synthetase [Enterococcus faecium E1679] gi|291597719|gb|EFF28859.1| polyprenyl synthetase [Enterococcus faecium U0317] gi|291603912|gb|EFF33440.1| polyprenyl synthetase [Enterococcus faecium E1162] gi|313587756|gb|EFR66601.1| polyprenyl synthetase [Enterococcus faecium TX0133a01] gi|313592801|gb|EFR71646.1| polyprenyl synthetase [Enterococcus faecium TX0133B] gi|313594692|gb|EFR73537.1| polyprenyl synthetase [Enterococcus faecium TX0133A] gi|313598660|gb|EFR77505.1| polyprenyl synthetase [Enterococcus faecium TX0133C] gi|313640334|gb|EFS04915.1| polyprenyl synthetase [Enterococcus faecium TX0133a04] gi|313643926|gb|EFS08506.1| polyprenyl synthetase [Enterococcus faecium TX0082] Length = 328 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 162/311 (52%), Gaps = 15/311 (4%) Query: 20 LKRICSDVEM----IPDVVKYLIFSGGKRLRPMLTLA-TALMLEYRGDNHVLLACAIEFI 74 LKR+ V + + +K I +GGK LRP L + E D + LA +IE + Sbjct: 21 LKRMEETVRLKNKPVEQAIKETIHAGGKLLRPAYQLLFSQFGPEQDRDKAIALAASIEML 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDD+VD++ LRRG+ R +GN SV GD+L C + + +L++L Sbjct: 81 HTATLIHDDIVDEADLRRGQPNIRSQFGNVVSVYAGDYLF--VCCFKLLSDYSTSLKSLQ 138 Query: 135 LVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L + ++ + GEL Q+ N +++ ++YL I KTA LF + V + +G Sbjct: 139 LNSRSMEKVLNGELGQMDDRYNYELSVKEYLENISGKTAELFQLSCSVGAFESGTSERFA 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + G+++G+AFQ++DD+LDY E E+GK + ED R G +LP+I + Q+ + Sbjct: 199 KKAGDIGLSIGMAFQIIDDILDYTKESQEIGKPVLEDMRQGVYSLPLIYSLQKNKPKLLP 258 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW--KKS 309 + + + V+ ++K I+ + + A SY +KA ++ LP +S K++ Sbjct: 259 YLEKKAAMTEEDVDAVRK---IVEHTGGVEEARKLAASYTEKALKEIKKLPATSLRTKEN 315 Query: 310 LMEVVDFCLQR 320 L + L R Sbjct: 316 LFSLTQLILDR 326 >gi|330508369|ref|YP_004384797.1| bifunctional short chain isoprenyl diphosphate synthase [Methanosaeta concilii GP-6] gi|328929177|gb|AEB68979.1| bifunctional short chain isoprenyl diphosphate synthase [Methanosaeta concilii GP-6] Length = 319 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 11/291 (3%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 ++L+ SGGKRLRP + L A A +IE +H TL+HDD++D++ +RRG+ Sbjct: 33 RHLVDSGGKRLRPSMLLLAAEAAGGEALALAPAAVSIELVHNFTLIHDDIMDNADVRRGR 92 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE-----ALEALSLVACTLAEGELRQLS 149 A +WG ++L GD L S+AF ++ T + A+ LS + EG+ + Sbjct: 93 PAVHKIWGQSGAILAGDTLYSKAFQVLGMTAASPERILGAMNMLSRTCTAICEGQWLDME 152 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 VTE +Y+ +I+ KT VL+ A+ + L+AG V +AL +G G+ FQL D Sbjct: 153 FESKDRVTENEYMEMIEKKTGVLYGASAGMGGLLAGASPEVVRALDEFGRLTGMGFQLQD 212 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 DV+D GK G D GK TL +I AF + + S E + + Sbjct: 213 DVIDLLTPEEVSGKRQGGDLIEGKKTLIMIHAFA------NDVVVPVFSKKDASAEEIFR 266 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + I+ + ++ RA + K +L LP S K++L+E+ D+ ++R Sbjct: 267 SISILEGSGSIEYARSRAEEMVVQGKRALDVLPPSPAKETLLELADYMIRR 317 >gi|164690679|dbj|BAF98629.1| octaprenyl diphosphate synthase [Streptomyces argenteolus] Length = 357 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/303 (32%), Positives = 152/303 (50%), Gaps = 18/303 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVVDDSA 89 DVV Y + GK +RP +TLA + GD + +A IE+ H A+L+HDD++D+ A Sbjct: 57 DVVHYALDEPGKMIRPTITLAACQAVG--GDPEMFGRVAAGIEYGHLASLMHDDLIDEDA 114 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF----CM--VIETKSQEALEALSLVACTLAEG 143 RR + +G ++V+ GD LL AF C V + EA++ G Sbjct: 115 TRRRIPSVWNAFGVPSAVIAGDLLLFTAFHALACQQGVPAERIVRTFEAVTRSGVDACFG 174 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--ALKSYGMNL 201 +++L+ N+ ++ E YL + KT + E ++I G S RQ +L+ YG +L Sbjct: 175 TSLEMALAGNISISTETYLKMAAGKTGAVLRGCSEGGAVIGG--GSPRQIASLRDYGEDL 232 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF----WKSTI 257 G+AFQ++DDVL Y + MGK + D RN +PTLPV+LA T+ E++F + + I Sbjct: 233 GVAFQIIDDVLPYESDEETMGKPVVSDLRNRRPTLPVLLARDECTEDERDFLETVYSTGI 292 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 DG + + ++R AL A Y A DSL L D++ + L +V Sbjct: 293 GDGPAAEAAHHRMRAVLRRTGALAGAREMADEYCASALDSLAGLRDNAGVRLLRSLVHLA 352 Query: 318 LQR 320 R Sbjct: 353 RDR 355 >gi|33861175|ref|NP_892736.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639907|emb|CAE19077.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 323 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 93/290 (32%), Positives = 158/290 (54%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKRLRP +L ++ A+ ++ H LA E IHTA+L+HDDVVD+++ R Sbjct: 38 EHLFSAGGKRLRPGIVLLISKAISQDFTLTTKHKRLAEITEMIHTASLVHDDVVDEASTR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG + + +VL GDFL +QA + + + ++ LS V LAEGE++Q Sbjct: 98 RGVDTVHSRFNTRVAVLAGDFLFAQASWHLANLDNVKVVKLLSRVIMDLAEGEIKQNLNR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + T Y++ KTA L + + + + ++ +++ L +G N+G+AFQ+VDD+ Sbjct: 158 FDSAQTFSKYINKSYCKTASLIANSTKAAGVLCNLEDDKLNHLYEFGKNIGLAFQVVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ G ++GK D +G T PV+ A + E IN + E+L A Sbjct: 218 LDFTGNDKQLGKPAVSDLASGYLTAPVLYALE-----ENENLSVLINRELVEKEDLNNAL 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 I+ ++A+ + A + +K++L LPDS +K++L+ + +F L RL Sbjct: 273 NIVMNSQAIKRSRKLAEDFALHSKEALLWLPDSEYKRALLSLPEFVLSRL 322 >gi|261417952|ref|YP_003251634.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC61] gi|319767236|ref|YP_004132737.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC52] gi|261374409|gb|ACX77152.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC61] gi|317112102|gb|ADU94594.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC52] Length = 320 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/242 (30%), Positives = 132/242 (54%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + D+ V + + + S+ + + +L+ +GGKR+RP+ L +A Y Sbjct: 3 LKAMYSFLSDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ +RRG+ + W N+ ++ GD+L +++ Sbjct: 63 FERIKHVAVALELIHMASLVHDDVIDDADVRRGRPTIKARWSNRFAMYTGDYLFARSLER 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S A + L+ + GE+ Q+ D YL I+ KTA+L +A+ ++ Sbjct: 123 MAELDSPRAHQVLAKTIVEVCHGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L AG +V L +G +G++FQ+ DD+LD+ G ++GK G D + G TLPV+ Sbjct: 183 ALAAGAPEAVANRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLQQGNVTLPVLY 242 Query: 241 AF 242 A Sbjct: 243 AL 244 >gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 297 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/228 (35%), Positives = 130/228 (57%), Gaps = 13/228 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y +F+GGKRLRP+LTLA + + ACAIE IHT +L+HDD+ +D+ Sbjct: 32 IHEAMHYSVFAGGKRLRPLLTLAAGDLFGANKKTILPFACAIELIHTYSLIHDDLPALDN 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQEALEALSLVACT-- 139 LRRGK +V+G ++L GD LL+ AF ++ T ++ L A+S VA Sbjct: 92 DDLRRGKSTNHVVFGEDIAILAGDALLNYAFELMTSKGVENFTDARTPLWAISEVAKASG 151 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + G++ + KN D+ E ++ K KT LF+A++ + ++++ + + L + Sbjct: 152 TKGMIGGQVVDIKSEKNADIDLETVSYIHKHKTGALFTASIRIGAILSQASQADLEKLTT 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y LG+AFQ+VDD+LD G+ ++GK +G+D N K T P I+ + Sbjct: 212 YAQKLGLAFQVVDDILDIEGDEQKLGKTVGKDDDNEKATYPKIMGLKE 259 >gi|91077592|ref|XP_973319.1| PREDICTED: similar to AGAP000591-PA [Tribolium castaneum] Length = 446 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 90/302 (29%), Positives = 149/302 (49%), Gaps = 21/302 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL------------LACAIEFIHTATL 79 ++ Y GK +RPM+ + A + Y H+ +A E IHTA+L Sbjct: 153 EIATYYFDGHGKAIRPMVAILMARAINY----HIYKEKSGLLTSQREVAMISEMIHTASL 208 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 +HDDV+D S RRGK + ++W ++ + GDF+L+ A M+ K+ + LS V Sbjct: 209 VHDDVIDQSDFRRGKPSVNVMWNHKKVTMAGDFILAVASIMIARLKNNDVTLVLSQVVSD 268 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 L +GE QL + + YL KTA L + +++ +++AG + YG Sbjct: 269 LVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANSVKSVTMLAGADEQLSDISYQYGR 328 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 NLG+AFQLVDD+LD+ MGK D + G T PV+ A ++ + + Sbjct: 329 NLGLAFQLVDDLLDFVSSSAAMGKPTAADLKLGLATAPVLFACEKFPELNPMIMRRFQEP 388 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 G ++++AF ++ ++R L T+Y A + Q+A L +S ++K L+ D+ L Sbjct: 389 G-----DVERAFDLVHKSRGLEQTQYLAKQHCQEAVRLANLLEESPYQKGLIVAADYVLN 443 Query: 320 RL 321 R+ Sbjct: 444 RM 445 >gi|282897366|ref|ZP_06305368.1| Polyprenyl synthetase [Raphidiopsis brookii D9] gi|281198018|gb|EFA72912.1| Polyprenyl synthetase [Raphidiopsis brookii D9] Length = 323 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 90/290 (31%), Positives = 155/290 (53%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP + L + D H LA E IHTA+L+HDDVVD+S +R Sbjct: 38 EHLFGAGGKRIRPAIVLLISRATTLEEDISLGHRRLAEITEMIHTASLVHDDVVDESDIR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG ++GN+ +VL GDFL +Q+ + + E ++ LS V LA GE++Q Sbjct: 98 RGVPTVHSLFGNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLAAGEIQQGLNR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + ++ E YL KTA L + + + + +++ V L +YG +LG+AFQ+VDD+ Sbjct: 158 FDTSLSTETYLKKSYYKTASLIANSAKSAGILSNVSPQSANNLYNYGKDLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ G ++ +GK D ++G T PV+ A + E + +G +L++A Sbjct: 218 LDFTGSMDTLGKPAASDLKSGNLTAPVLFALEEQPCLEVLIEREFAQEG-----DLEQAV 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++ +++ + A + + A+ + L S K++L+ + D+ L RL Sbjct: 273 KLISDSQGIPRARELAAHHAKLARQHIADLEASESKQALINMTDYVLSRL 322 >gi|260579301|ref|ZP_05847183.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Corynebacterium jeikeium ATCC 43734] gi|258602430|gb|EEW15725.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Corynebacterium jeikeium ATCC 43734] Length = 336 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 158/317 (49%), Gaps = 9/317 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 + M++V L+ R+ + D + +L +GGKR R M L A E V A Sbjct: 25 QSMQQVEQLLKDRLSVGESFLTDKISHLFEAGGKRFRVMFALLAAHYGEKPTAQEVHEAA 84 Query: 70 AI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+ E H ATL HDDV+D+S RRG +A W N ++L GD+L + A ++ T + Sbjct: 85 AVVELTHLATLYHDDVMDESDQRRGAESANKRWNNSVAILAGDYLFAIA-SEIMATLGAQ 143 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ + L G++R+ +++ + E YL VI+ KT VL ++A + +L +G Sbjct: 144 TVQHFAETFQELVTGQMRETIGARDGEDEIEHYLTVIQEKTGVLIASAGWLGALHSGASE 203 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG--- 245 R+AL +G N+G FQ+VDD++D + GK G D R G TLPV+ A Q+ Sbjct: 204 EHREALFRFGRNVGQIFQIVDDIIDIWADPEVSGKQPGTDLREGVFTLPVLYAMQQDDAT 263 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 R + + D + E L+ ++R + + Y Q +D L LP++ Sbjct: 264 GARLREILTGPVTDDALVDEALE----LIRGSEGREKSFEVVQRYRQYGEDELAKLPENQ 319 Query: 306 WKKSLMEVVDFCLQRLN 322 ++L ++DF L+RL Sbjct: 320 VTQALRHLMDFALERLG 336 >gi|269103559|ref|ZP_06156256.1| putative octaprenyl-diphosphate synthase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163457|gb|EEZ41953.1| putative octaprenyl-diphosphate synthase [Photobacterium damselae subsp. damselae CIP 102761] Length = 189 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 109/188 (57%), Gaps = 1/188 (0%) Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +S +AEGE++QL + D TEE Y+ VI SKTA LF AA +V+++IA V Sbjct: 1 MSAATNVIAEGEVQQLMNCNDPDTTEESYMEVIYSKTARLFEAATQVAAIIAKASPEVET 60 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 A + YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A + G ++ Sbjct: 61 AFQDYGRYLGTAFQLIDDVLDYVADGKEMGKNVGDDLAEGKPTLPLLYAMRHGNPQQAAM 120 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 + I ++ L + MRE AL T+ RA KA +L LP+S+ K++L+ Sbjct: 121 IREAIEQAN-GMDKLDEILTCMRETGALEYTQQRAEQEADKAIAALDILPESAHKQALIA 179 Query: 313 VVDFCLQR 320 + +QR Sbjct: 180 LAHLSVQR 187 >gi|153808868|ref|ZP_01961536.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185] gi|149128694|gb|EDM19912.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185] Length = 324 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/222 (36%), Positives = 127/222 (57%), Gaps = 7/222 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 ++Y++ GGKR+RP+L L + YR D + A AIE H TLLHDD++D S +R Sbjct: 31 IEYILSLGGKRIRPVLMLMAYNL--YREDVASIYDPAAAIEVYHNHTLLHDDLMDRSDMR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQL 148 RGK VW + T++L GD +L AF ++ S+ E +E L + EG+ + Sbjct: 89 RGKPTVHKVWNDNTAILSGDAMLILAFRLMTAAPSEHLKEVMELFGLTTLEICEGQQLDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 +VTE++Y+ +I+ KTAVL + +L++ +++AG + L ++GM +G+AFQL Sbjct: 149 EFESRDNVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNFGMQIGVAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 DD+LD G+ GK IG D K T +I A R ++++ Sbjct: 209 DDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALNRADEKQR 250 >gi|170783303|ref|YP_001711637.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis subsp. sepedonicus] gi|169157873|emb|CAQ03081.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis subsp. sepedonicus] Length = 325 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 102/318 (32%), Positives = 154/318 (48%), Gaps = 34/318 (10%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 R DV + +YL+ +GGKR+RPML L A + E V A AIE H A+L H Sbjct: 21 RFADDVADV--TTRYLLDAGGKRVRPMLALLIAQLGEGNTQQVVDAAVAIEITHLASLYH 78 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-- 139 DDV+D++ +RRG +A+ VWGN ++L GD L ++A +V + + A+ L A T Sbjct: 79 DDVMDEADMRRGVPSAQAVWGNSVAILAGDLLFARASKIVADLGPR----AIRLQAATFE 134 Query: 140 -LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G+L + + E YL V+ KT L + A ++ + +G + A+ ++G Sbjct: 135 RLVLGQLHETIGPREGQDPIEHYLDVLADKTGSLIACAAQMGVIYSGADPELESAVLAFG 194 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI----LA------------F 242 G+AFQLVDDVLD + E GK G D R G TLP++ LA Sbjct: 195 ERTGVAFQLVDDVLDLADQPEETGKLAGTDLRAGVATLPLLYLRRLAETDAAAAALLARI 254 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 QR + E+ S +L A +R++ T A+ + +A ++L LP Sbjct: 255 QRDVEHEET---------PESEADLTAAIAELRDHEVTARTIAEAHRWAAEAVEALAPLP 305 Query: 303 DSSWKKSLMEVVDFCLQR 320 KK+L D ++R Sbjct: 306 QGPVKKALTRFADTIVER 323 >gi|260590834|ref|ZP_05856292.1| polyprenyl synthetase [Prevotella veroralis F0319] gi|260537185|gb|EEX19802.1| polyprenyl synthetase [Prevotella veroralis F0319] Length = 324 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 125/220 (56%), Gaps = 3/220 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +KY++ GGKR+RP L L + + + ++ + ACA+E H TLLHDD++DD+ LRRG Sbjct: 31 IKYVLSLGGKRIRPTLMLLSYNLFKEDPESILSPACALETYHNYTLLHDDLMDDAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQLSL 150 + + W T++L GD +L AF + + + E L+ + A + EG+ + Sbjct: 91 QQTVHVRWDANTAILSGDSMLVLAFDRMAKCSDKYLREVLKLFTTTALEIGEGQQYDMEF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DV EE+Y+ +I+ KT+VL + A+++ +L+A ++L +G +G+AFQL DD Sbjct: 151 ETRNDVKEEEYIEMIRLKTSVLLACAMKIGALLADAPEEDAESLYKFGEQVGLAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LD G+ GK IG D + K T +I AF + R++ Sbjct: 211 YLDVYGDPKVFGKKIGGDITSNKKTYMLINAFNKANARQR 250 >gi|94502254|ref|ZP_01308739.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833697|ref|YP_001597893.1| polyprenyl synthetase [Candidatus Sulcia muelleri GWSS] gi|293977807|ref|YP_003543237.1| geranylgeranyl pyrophosphate synthase [Candidatus Sulcia muelleri DMIN] gi|94451192|gb|EAT14132.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206187|gb|ABS30497.1| polyprenyl synthetase [Candidatus Sulcia muelleri GWSS] gi|292667738|gb|ADE35373.1| Geranylgeranyl pyrophosphate synthase [Candidatus Sulcia muelleri DMIN] Length = 326 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 162/321 (50%), Gaps = 12/321 (3%) Query: 12 MEKVNFLILKRI-----------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +EK+NF+I I S + +I ++ Y GK +RP+ ML Sbjct: 6 LEKINFIIKNEIEIFETLFRNNFYSKIPLIQEINNYFFKIKGKYIRPIFVFLITKMLGNI 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 LA IE IHTA+L+HDDV+D S RRG ++ +W N+T+V+ GD++ S++ + Sbjct: 66 SKKTYDLAILIELIHTASLIHDDVIDFSNTRRGFLSINAIWQNKTAVIFGDYIFSKSLNI 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 I+ + L +S ++EGE+ Q+ N + E Y +I KTA+L SA E Sbjct: 126 AIKNNYIDYLNLISKTIEQMSEGEILQMKYFNNFFIKEYIYNIIIFKKTAILISACCEGC 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + + +K +G G+AFQ+ DD+LDY+ +N+ +N R K TLP I Sbjct: 186 AKSLNKKKKIVLNIKKFGELAGMAFQIKDDLLDYKNHIND-NENYFLLLREFKITLPFIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A ++ +K+ KN+ + N+ I+ +L K ++ + + + Y+ + KA L Sbjct: 245 ALKKTSKKYKNWLFNEFNNKNINKYSLIKILNFIKNSGGIEYSIYKIKLFTNKALLLLNN 304 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 P++ KSL ++ F +RL Sbjct: 305 YPNNKANKSLKYLILFNKERL 325 >gi|77405958|ref|ZP_00783037.1| polyprenyl synthetase family protein [Streptococcus agalactiae H36B] gi|77411623|ref|ZP_00787964.1| polyprenyl synthetase family protein [Streptococcus agalactiae CJB111] gi|77162340|gb|EAO73310.1| polyprenyl synthetase family protein [Streptococcus agalactiae CJB111] gi|77175410|gb|EAO78200.1| polyprenyl synthetase family protein [Streptococcus agalactiae H36B] Length = 326 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 93/316 (29%), Positives = 163/316 (51%), Gaps = 9/316 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVL-- 66 K++++ N LI +RI + I + L +GGK+LRP L + L + D L Sbjct: 13 KNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGNKENQDTQQLKK 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A ++E +H ATL+HDDV+DDS LRRG + + +G +V GD L + F +++E+ + Sbjct: 73 IAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTGDLLFTVFFDLILESMA 132 Query: 127 QEALEALSLVAC-TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++ + + GEL Q+ L N YL I KTA LF A + + G Sbjct: 133 DTPFMTINAKSMRKILMGELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGG 192 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + V + G N+G+ FQ++DD+LDY + K + ED G +LP++LA + Sbjct: 193 AEKEVVRLAGHIGFNIGMTFQILDDILDYTADKKTFNKPVLEDLAQGVYSLPLLLAIEEN 252 Query: 246 TKREKNFWKSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + +K ++ ++ E+++K ++ +R + + A + +KA + LP S Sbjct: 253 P----DIFKPILDKKTDMATEDMEKIAYLVVSHRGVDKARHLARKFTEKAISDINKLPQS 308 Query: 305 SWKKSLMEVVDFCLQR 320 S KK L+++ ++ L+R Sbjct: 309 SAKKQLLQLTNYLLKR 324 >gi|315303877|ref|ZP_07874357.1| heptaprenyl diphosphate synthase component II [Listeria ivanovii FSL F6-596] gi|313627753|gb|EFR96406.1| heptaprenyl diphosphate synthase component II [Listeria ivanovii FSL F6-596] Length = 324 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 158/294 (53%), Gaps = 13/294 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVV 85 E D +L+ +GGKR+RPM +A L D ++ + AIE IH A+++HDDVV Sbjct: 34 ETTSDAALHLLEAGGKRIRPMFVCLSA-RLSPNADFEMVRDASVAIELIHMASIVHDDVV 92 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 DD+ LRRG+ + WGN ++ GDFL +++ + E K A + LS V L+ GE+ Sbjct: 93 DDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDIAAHKMLSRVTVELSTGEI 152 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 QL N D + +YL IK KTA+L +A+ + +++G + Q L +G +G+AF Sbjct: 153 EQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGIVSGQSQADYQKLYRFGYYVGMAF 212 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 Q+ DDVLD+ G E+GK GED R G TLPV A E +F K I+ E Sbjct: 213 QITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAM------EDSFLKKRISQITEKTE 266 Query: 266 NLKKAFIIMR-ENRALVDTEYRAYSYGQKAK---DSLRCLPDSSWKKSLMEVVD 315 +++ A ++ + E A +Y +KA DSL +P+ K ++ V+D Sbjct: 267 SVEMAALVAEVKKTGAKKAEDVATAYLKKALATLDSLPQVPELKPLKQIVRVLD 320 >gi|218264432|ref|ZP_03478283.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii DSM 18315] gi|218222005|gb|EEC94655.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii DSM 18315] Length = 324 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 82/226 (36%), Positives = 126/226 (55%), Gaps = 6/226 (2%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP L L + + D + A +E H TLLHDD++D++ RR Sbjct: 31 IEYILSLGGKRIRPALVLMACNLYKENVDIAIKPALGLEVFHNFTLLHDDLMDEADKRRN 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLSL 150 K VW + T++L GD +L A+ ++ ETKS+ E L L T E G+ + Sbjct: 91 KPTVHKVWNDNTAILSGDAMLIAAYQLIGETKSESLKEILDLFTRTALEICGGQQYDMEF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DVTE +Y+ +I+ KTAVL + AL++ +++ + +AL +G+N+G+AFQL DD Sbjct: 151 ESRTDVTEAEYIEMIRLKTAVLLACALKMGAIMGNAPEADAEALYQFGINIGLAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT---KREKNFW 253 +LD G+ GKNIG D K T +I A + + K E N W Sbjct: 211 LLDVYGDTATFGKNIGGDILCNKKTFMLINALRLASDTQKAELNNW 256 >gi|33240492|ref|NP_875434.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238020|gb|AAQ00087.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 323 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 89/296 (30%), Positives = 162/296 (54%), Gaps = 16/296 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKR+RP + L + L G+ H LA E IHTA+L+HDDV+D+++ Sbjct: 36 AAEHLFSAGGKRIRPGIVLLISKALSAEGELSSKHRRLAEITEMIHTASLVHDDVLDEAS 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-- 147 RRG + ++ +VL GDFL +QA + + + ++ LS V LAEGE++Q Sbjct: 96 TRRGVDTVHNRFDHKVAVLAGDFLFAQASWHLANLDNLDVVKLLSRVIMDLAEGEVKQGI 155 Query: 148 --LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 +++LDV YL KTA L + + + +++ + + L ++G LG+AF Sbjct: 156 YRFDPNQSLDV----YLEKSYCKTASLIANSAQAVGVLSNESDYHLKCLYNFGKQLGLAF 211 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 Q+VDD+LD+ + ++GK D G T P + A + ++ + N+G Sbjct: 212 QVVDDILDFTSDDKQLGKPAASDLSAGYLTAPALYALEENPSFKELIIREFSNEG----- 266 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +L A ++RE+ A++ + A ++ + + +S++ +PDS K++L+++ ++ L RL Sbjct: 267 DLDHAMELVRESNAIIRSRKLAENFAKNSYESIKWMPDSPSKRALLDLPEYVLGRL 322 >gi|68536956|ref|YP_251661.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium K411] gi|68264555|emb|CAI38043.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium K411] Length = 353 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 158/317 (49%), Gaps = 9/317 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 + M++V L+ R+ + D + +L +GGKR R M L A E V A Sbjct: 42 QSMQQVEQLLKDRLSVGESFLTDKISHLFEAGGKRFRVMFALLAAHYGEKPTAQEVHEAA 101 Query: 70 AI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+ E H ATL HDDV+D+S RRG +A W N ++L GD+L + A ++ T + Sbjct: 102 AVVELTHLATLYHDDVMDESDQRRGAESANKRWNNSVAILAGDYLFAIA-SEIMATLGAQ 160 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ + L G++R+ +++ + E YL VI+ KT VL ++A + +L +G Sbjct: 161 TVQHFAETFQELVTGQMRETIGARDGEDEIEHYLTVIQEKTGVLIASAGWLGALHSGASE 220 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG--- 245 R+AL +G N+G FQ+VDD++D + GK G D R G TLPV+ A Q+ Sbjct: 221 EHREALFRFGRNVGQIFQIVDDIIDIWADPEVSGKQPGTDLREGVFTLPVLYAMQQDDAT 280 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 R + + D + E L+ ++R + + Y Q +D L LP++ Sbjct: 281 GARLREILTGPVTDDALVDEALE----LIRGSEGREKSFEVVQRYRQYGEDELAKLPENQ 336 Query: 306 WKKSLMEVVDFCLQRLN 322 ++L ++DF L+RL Sbjct: 337 VTQALRHLMDFALERLG 353 >gi|297529620|ref|YP_003670895.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. C56-T3] gi|297252872|gb|ADI26318.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. C56-T3] Length = 320 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/242 (30%), Positives = 132/242 (54%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + D+ V + + + S+ + + +L+ +GGKR+RP+ L +A Y Sbjct: 3 LKAMYSFLSDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ +RRG+ + W N+ ++ GD+L +++ Sbjct: 63 FERIKHVAVALELIHMASLVHDDVIDDADVRRGRPTIKARWSNRFAMYTGDYLFARSLER 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S A + L+ + GE+ Q+ D YL I+ KTA+L +A+ ++ Sbjct: 123 MAELDSPRAHQVLAKTIVEVCHGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L AG +V L +G +G++FQ+ DD+LD+ G ++GK G D + G TLPV+ Sbjct: 183 ALAAGAPEAVANQLYWFGHCVGMSFQITDDILDFTGTEEQLGKPAGSDLQQGNVTLPVLY 242 Query: 241 AF 242 A Sbjct: 243 AL 244 >gi|117927490|ref|YP_872041.1| trans-hexaprenyltranstransferase [Acidothermus cellulolyticus 11B] gi|117647953|gb|ABK52055.1| Trans-hexaprenyltranstransferase [Acidothermus cellulolyticus 11B] Length = 349 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 94/314 (29%), Positives = 153/314 (48%), Gaps = 11/314 (3%) Query: 12 MEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +E V L+ + + S + + ++L+ +GGKR RP+L L A + V A Sbjct: 40 LEAVETLLRQAVRSSGYPFLTETSRHLVEAGGKRFRPLLVLLAAEYGDPTAPGVVPAAAV 99 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E H ATL HDDV+D++ +RRG +A W N ++L GDFL S+A ++ + Sbjct: 100 VELTHLATLYHDDVMDEAVVRRGTASANARWSNTIAILTGDFLFSRASDLLADLGP---- 155 Query: 131 EALSLVACT---LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 EA+ + A T L +G++R+ L + +D E YL V+ KT L + A ++ +G Sbjct: 156 EAVRIQARTFERLVQGQIRETLGPEEGVDPVEH-YLRVVADKTGSLIATAARFGAMFSGA 214 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + +YG +G AFQL DD+LD + E GK G D R G TLPV+ R Sbjct: 215 PAWIVDVMVTYGERIGTAFQLSDDLLDVMSDSTESGKAPGTDLREGVRTLPVLHVL-RSM 273 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + +N E ++ ++R + A+ + +A+ +L LPD Sbjct: 274 GPSDGRLRELLNGDLTDDERHRETLALLRAHPAMERARADLRRWVSEARAALEPLPDQPA 333 Query: 307 KKSLMEVVDFCLQR 320 ++L + DF L R Sbjct: 334 TQALQRLCDFVLAR 347 >gi|295084865|emb|CBK66388.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens XB1A] Length = 324 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 83/228 (36%), Positives = 130/228 (57%), Gaps = 10/228 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 ++Y++ GGKR+RP+L L + YR D + A AIE H TLLHDD++D S +R Sbjct: 31 IEYILSLGGKRIRPVLMLMGYNL--YREDVASIYDPATAIEVYHNHTLLHDDLMDRSDVR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---ETKSQEALEALSLVACTLAEGELRQL 148 RGK VW + T+VL GD +L AF + + +E ++ SL + EG+ + Sbjct: 89 RGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQEHLKEVMDLFSLTTLEICEGQQLDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE++Y+ +I+ KTAVL +A+L++ +++AG + L +GM++G+AFQL Sbjct: 149 EFESRCDVTEDEYIEMIRLKTAVLLAASLKIGAILAGATAEDSENLYHFGMHIGVAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFW 253 DD+LD G+ GK IG D K T +I A + ++++ N W Sbjct: 209 DDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALEHADEKQQEELNRW 256 >gi|188585880|ref|YP_001917425.1| Polyprenyl synthetase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350567|gb|ACB84837.1| Polyprenyl synthetase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 337 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 82/241 (34%), Positives = 136/241 (56%), Gaps = 6/241 (2%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + ++ +L+ GK RP+L +A + + D + A A E IH A+L+HDD++D+S Sbjct: 34 VQSIINHLLSRQGKLFRPVLVYLSANIHQVDKDRVLKTAMASELIHLASLVHDDIIDNSD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRGK WGN+++VLVGD+L S+AF ++ S + + + + +GEL QL+ Sbjct: 94 YRRGKQTVNYYWGNKSAVLVGDYLFSKAFSILAMIDSPKIMALFTDAISKMCQGELIQLN 153 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA---GVQNSVRQALKSYGMNLGIAFQ 206 + ++ E Y VI+ KTA L +A E ++++ G ALK+YG++LG A+Q Sbjct: 154 NAFKSGISREIYFKVIEYKTAALLAACCESGAILSSGNGKSCKSAAALKNYGLHLGRAYQ 213 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG--TKRE-KNFWKSTINDGKIS 263 ++DDV+DY + K G+D G TLPVIL ++ T +E + FW++ + S Sbjct: 214 IIDDVMDYTVPMGSSEKPRGKDLTEGIITLPVILLMEKNELTGQELEEFWQAGPTPNQFS 273 Query: 264 V 264 + Sbjct: 274 L 274 >gi|123968209|ref|YP_001009067.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. AS9601] gi|123198319|gb|ABM69960.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. AS9601] Length = 323 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 163/292 (55%), Gaps = 12/292 (4%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKRLRP +L ++ A+ E+ H LA E IHTA+L+HDDVVD+++ R Sbjct: 38 EHLFSAGGKRLRPGIVLLISKAISPEFCLTTKHKRLAEITEMIHTASLVHDDVVDEASTR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG + + +VL GDFL +QA + + ++ LS V LAEGE++Q +L+ Sbjct: 98 RGVDTVHSRFNTRVAVLAGDFLFAQASWHLANLDNVNVVKLLSRVIMDLAEGEIKQ-NLN 156 Query: 152 KNLDVTEEDYLHVIKS--KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + D + ++ KS KTA L + + + + +++G+ + +L +G N+G+AFQ+VD Sbjct: 157 R-FDSAQSFSKYINKSYCKTASLIANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T PV+ A + E IN ++L Sbjct: 216 DILDFTGNDKQLGKPAVSDLASGYLTAPVLYALE-----ENKQLSVLINRELAEKDDLDD 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A I+ ++A+ + A + +K+++ LPDS +K++LM + +F L R+ Sbjct: 271 ALSIIMNSKAIESSRKLAEDFAILSKEAIVWLPDSEYKRALMALPEFVLSRI 322 >gi|56420745|ref|YP_148063.1| heptaprenyl diphosphate synthase component II [Geobacillus kaustophilus HTA426] gi|56380587|dbj|BAD76495.1| heptaprenyl diphosphate synthasecomponent II (spore germination protein C3) [Geobacillus kaustophilus HTA426] Length = 320 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 129/232 (55%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ V + + + S+ + + +L+ +GGKR+RP+ L +A Y + +A A Sbjct: 13 DLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHYDFERIKHVAVA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH A+L+HDDV+DD+ +RRG+ + W N+ ++ GD+L +++ + E S A Sbjct: 73 LELIHMASLVHDDVIDDADVRRGRPTIKARWSNRFAMYTGDYLFARSLERMAELDSPRAH 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ + GE+ Q+ D YL I+ KTA+L +A+ ++ +L AG +V Sbjct: 133 QVLAKTIVEVCHGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLGALAAGAPEAV 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 L +G +G++FQ+ DD+LD+ G ++GK G D + G TLPV+ A Sbjct: 193 ANQLYWFGHCVGMSFQITDDILDFTGTEEQLGKPAGSDLQQGNVTLPVLYAL 244 >gi|298385074|ref|ZP_06994633.1| polyprenyl synthetase [Bacteroides sp. 1_1_14] gi|298262218|gb|EFI05083.1| polyprenyl synthetase [Bacteroides sp. 1_1_14] Length = 324 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 88/251 (35%), Positives = 136/251 (54%), Gaps = 10/251 (3%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEF 73 N L +I E + + ++Y++ GGKR+RP+L L + Y+ D + A IE Sbjct: 13 NHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNL--YKEDVSSIYDPATGIEV 70 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EAL 130 H TLLHDD++D S +RRGK VW + T++L GD +L AF V + E + Sbjct: 71 YHNHTLLHDDLMDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAPEHLKEVI 130 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + SL A + EG+ + DV E++Y+ +I+ KTAVL +A+L++ +++AG Sbjct: 131 DLFSLTALEICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASLKIGAILAGASAVD 190 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK--- 247 + L ++GM +G+AFQL DD+LD G+ GK IG D K T +I A +R Sbjct: 191 AENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALERANGEQL 250 Query: 248 REKNFWKSTIN 258 +E N W + N Sbjct: 251 KELNRWLNAEN 261 >gi|14521122|ref|NP_126597.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Pyrococcus abyssi GE5] gi|5458339|emb|CAB49828.1| idsA-like multifunctional short chain isoprenyl diphosphate synthase [Pyrococcus abyssi GE5] Length = 346 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 93/317 (29%), Positives = 153/317 (48%), Gaps = 24/317 (7%) Query: 28 EMIPD--------VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 E+IP+ ++ +GGKR+RP + L + + A AIE IH +L Sbjct: 28 ELIPEKEPKVLYEAARHYPLAGGKRIRPFVVLTATEAVGGNALKAIYPAVAIELIHNYSL 87 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALS 134 +HDD++D RRGK VWG ++L GD L S+AF + K + LE + Sbjct: 88 VHDDIMDMDETRRGKPTVHKVWGINMAILAGDLLFSKAFEAISRAEISPEKKAKVLETIV 147 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + L EG+ L V+ E+Y+ +I KT LF A+ +V ++ +AL Sbjct: 148 KASNELCEGQALDLEFENREMVSIEEYMRMISGKTGALFDASAKVGGIVGTENEEYIEAL 207 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---- 250 +G N+G+AFQ+ DDVLD + ++GK +G D R GK TL V F+ ++ K Sbjct: 208 SRWGRNVGMAFQIWDDVLDLIADEEKLGKPVGSDIRKGKKTLIVAHFFENADEKAKEKFL 267 Query: 251 ---NFWKSTINDGKISVENLK----KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + + I E++K +A +++E+ ++ A +KA ++L LP+ Sbjct: 268 KVFGKYAGDVKGKGIIEEDVKAEVMEAIELLKEHGSIDYASRIARELVEKANEALNVLPE 327 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K L + F ++R Sbjct: 328 SRARKDLELLASFMVER 344 >gi|86130739|ref|ZP_01049338.1| polyprenyl synthetase [Dokdonia donghaensis MED134] gi|85818150|gb|EAQ39310.1| polyprenyl synthetase [Dokdonia donghaensis MED134] Length = 324 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 91/285 (31%), Positives = 148/285 (51%), Gaps = 10/285 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y++ GGKRLRP+LTL + E + + A A+E H +L+HDD++DD+ LRRG Sbjct: 31 INYILQLGGKRLRPVLTLMACELFEKDYKDALDAALAVEIFHNFSLVHDDIMDDAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQLSL 150 + W T +L GD +L +A+ + + +E + S A + EG+ + Sbjct: 91 EETVHEKWDINTGILSGDAMLIRAYQLFENYEGATFKELAKLFSKTAIEVCEGQQYDVDF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DVT +Y+ +I+ KTAVL AAL++ +++AG S ++ + +YG +LG+AFQL DD Sbjct: 151 ETRDDVTIPEYMKMIEYKTAVLVGAALKMGAIVAGASKSCQEGIYNYGRDLGLAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE----KNFWKSTINDGKISVEN 266 LD G+ GK +G D K T + A K + ++F+ + D +E Sbjct: 211 YLDAFGDPESFGKQVGGDIIENKKTFLYLTALANSNKDDAQQLEHFFSISPADPTDKIET 270 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 +K+ F+ ++ A TE Y QKA +L + S KK + Sbjct: 271 VKQQFL---DSGAAKATEEEIAKYTQKAFTALDNVDISEDKKETL 312 >gi|288556090|ref|YP_003428025.1| heptaprenyl diphosphate synthase component II [Bacillus pseudofirmus OF4] gi|288547250|gb|ADC51133.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Bacillus pseudofirmus OF4] Length = 323 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 95/312 (30%), Positives = 162/312 (51%), Gaps = 15/312 (4%) Query: 18 LILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAI 71 +I + + + V+ DV+K +L+ +GGKR+RP+ L A Y D HVL +A + Sbjct: 16 IIEQELEASVQARHDVLKNASTHLLKAGGKRIRPVFVLLAAKFGTY--DIHVLKNIAVPL 73 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H A+L+HDDV+DD+ LRRGK + W N+ ++ G+++ ++A + Sbjct: 74 ELVHMASLVHDDVIDDAELRRGKRTVKSQWDNKVAMYTGNYIFAKAVEASAYFDHPRVHQ 133 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS + GE+ Q+ N YL IK KTA+L + + E+ +L A ++ Sbjct: 134 VLSNTLVEMCIGEVEQIRDQYNWGQNLRVYLRRIKRKTALLIAVSCELGALAADADPVIQ 193 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE-- 249 + L ++G N+G++FQ+ DD+LD+ G ++GK G D R G TLP + A + Sbjct: 194 KHLYNFGYNVGMSFQITDDILDFVGTEKQLGKPAGGDLRQGNVTLPALYAMHHDEEISHL 253 Query: 250 -KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 KN K+ + I ++ + KA ++E+ + + + + +A DSL LPD K Sbjct: 254 IKNMLKNEFPEN-IDMQPILKA---VKESGGIDYSIKMSDRFLHRAYDSLERLPDCEAKN 309 Query: 309 SLMEVVDFCLQR 320 L E+ + +R Sbjct: 310 YLKEIAAYIGKR 321 >gi|288560181|ref|YP_003423667.1| bifunctional short chain isoprenyl diphosphate synthase IdsA [Methanobrevibacter ruminantium M1] gi|288542891|gb|ADC46775.1| bifunctional short chain isoprenyl diphosphate synthase IdsA [Methanobrevibacter ruminantium M1] Length = 331 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 151/298 (50%), Gaps = 10/298 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D YL +GGK LRP LTL + + ++ + A AIE IHT +L+HDD++DD +R Sbjct: 33 DACIYLTKAGGKMLRPALTLISCEAVGGNKEDALKTAAAIELIHTFSLIHDDIMDDDDMR 92 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLV--ACT-LAEG 143 RG + VW ++L GD L S+AF M+I +K + A AL+ V AC + EG Sbjct: 93 RGMPSVHKVWDEPLAILAGDTLFSKAFEMIISSKEENAHPEHVANALATVADACVKICEG 152 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + +S + DV E +Y +I KT L +AA + +++ G AL YG +GI Sbjct: 153 QASDMSFEGDFDVKEAEYSEMIYKKTGALIAAATKAGAIMGGADEKEVTALYEYGRMIGI 212 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQ+ DD LD + ++GK +G D GK TL V+ A + + D S Sbjct: 213 AFQIQDDYLDVISDEKDLGKPVGSDIAKGKMTLMVVKALAESDGEDHERLLEILKDNDCS 272 Query: 264 VENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + +A I + +D Y A AK+++ LPDS K L+ + DF + R Sbjct: 273 QDMVNEA-IDLFNKYGSIDYAYNLALENVNGAKEAIAFLPDSDAKSMLIALADFVIAR 329 >gi|119493298|ref|XP_001263839.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Neosartorya fischeri NRRL 181] gi|119411999|gb|EAW21942.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Neosartorya fischeri NRRL 181] Length = 451 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 95/275 (34%), Positives = 144/275 (52%), Gaps = 17/275 (6%) Query: 58 EYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112 ++ GD ++L LA E IHTA+LLHDDV+D++ RR +A L +GN+ +VL GDF Sbjct: 180 DFAGDENILPSQRRLAEITELIHTASLLHDDVIDNAVSRRSSNSANLQFGNKMAVLAGDF 239 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVI 165 LL +A + + E E L+ V L EGE QL + KN T+E YL Sbjct: 240 LLGRASVALARLRDPEVTELLATVIANLVEGEFMQLKNTVADEKNPVFTDETISYYLQKT 299 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA L S + ++L+ G V +A SYG NLG+AFQLVDD+LDY E+GK Sbjct: 300 YLKTASLISKSCRAAALLGGSTPEVVEAAYSYGRNLGLAFQLVDDLLDYTVSAVELGKPA 359 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 G D G T P++ A+++ + + +G ++++A I+ ++ + T Sbjct: 360 GADLELGLATAPLLFAWKQNPELGPLVGRKFSQEG-----DVQRAREIVYKSDGVEQTRA 414 Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A Y KA ++ PDS K L+++ + + R Sbjct: 415 LAQEYADKAVAAISDFPDSEAKSGLIQMCEKTMNR 449 >gi|325964291|ref|YP_004242197.1| geranylgeranyl pyrophosphate synthase [Arthrobacter phenanthrenivorans Sphe3] gi|323470378|gb|ADX74063.1| geranylgeranyl pyrophosphate synthase [Arthrobacter phenanthrenivorans Sphe3] Length = 366 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 152/292 (52%), Gaps = 17/292 (5%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 ++L+ +GGKR+RP+LTL A + + V A +E H ATL HDDV+D + RRG Sbjct: 78 RHLVEAGGKRIRPLLTLLCAHLGDASLPAVVQAAVVVELTHLATLYHDDVMDSAPFRRGA 137 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLS 151 A VWGN +VL GD + ++A +V E S+ AL + A T L G+L + Sbjct: 138 PTAHEVWGNSVAVLTGDLIFARASILVSELGSR----ALGIQARTFERLCLGQLHETVGP 193 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + + E YL VI KT L +A+ ++ ++ A + L YG +G+AFQL DDV Sbjct: 194 RPDEDPIEHYLSVIADKTGSLVAASGQLGAIFAEADPAFEPVLVEYGEKVGVAFQLADDV 253 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVIL---AFQRGTKREKNFWKSTINDGKISV-ENL 267 +D G + GK+ G D R G PTLPV+L A + G + T+ DG +S E L Sbjct: 254 IDVTGIKVKSGKSPGTDLREGVPTLPVLLLRRAAEDGDQSAVELL--TLIDGDLSSDEAL 311 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL----MEVVD 315 +A +RE+ ++ A + +A +L LP+ K SL + VVD Sbjct: 312 AEAVAGLREHPVTAESWVVARQWANEAIAALAPLPEGVVKDSLSNFALAVVD 363 >gi|317495880|ref|ZP_07954243.1| polyprenyl synthetase [Gemella moribillum M424] gi|316914057|gb|EFV35540.1| polyprenyl synthetase [Gemella moribillum M424] Length = 320 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 94/307 (30%), Positives = 157/307 (51%), Gaps = 9/307 (2%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LEYRGDNHVLLACAIEFIHT 76 I K SD + + ++K +GGKR+R +L L A + E N + +A +E IHT Sbjct: 20 IFKITRSDDKKLNTIIKEYFLNGGKRVRVLLLLICANLGDFEKNKKNIIRIASIVEIIHT 79 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+L+HDD++D + RRG+ +G + ++ VGD+L + + E K + LS Sbjct: 80 ASLIHDDIIDKAKTRRGQTTMSRAYGEEYALYVGDYLFATVLREIAEFKDERLHMYLSNT 139 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L GE+ Q N+ DYL IK KTA+L + A S+++ N Q + Sbjct: 140 LKELCIGEIIQEEGLYNIRTRRTDYLKKIKRKTAILIAFATSAGSIVSCASNENIQRSYA 199 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 +G LG+++Q++DD LD+ G +GK IG+D NG TLP I+A + + KNF K + Sbjct: 200 FGYYLGMSYQIIDDYLDFAGGSETLGKEIGQDLINGNITLPAIIAREHNSALFKNFSKDS 259 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 S+E + ++ +++D + Y +KA ++ L + + K+ L+ V+D Sbjct: 260 ------SLEEKQNLIKFIKNTESILDETLEISQRYLEKALLNIENLGNDNVKEELVFVMD 313 Query: 316 FCLQRLN 322 +R N Sbjct: 314 KLARREN 320 >gi|308275697|gb|ADO25596.1| Putative polyprenyldiphosphate synthase component [Corynebacterium pseudotuberculosis I19] Length = 339 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 99/327 (30%), Positives = 167/327 (51%), Gaps = 21/327 (6%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 ED++ M +V L+ K +C + I + VK+L +GGKR RPM AL+ GD+ Sbjct: 25 EDIS-AGMTRVEELLQKELCVGEDFIVEKVKHLANAGGKRFRPMF----ALLASQYGDHP 79 Query: 65 VL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V A +E H ATL HDDV+D++A RRG +A W N ++L GD LL+ Sbjct: 80 VSEDVIKAAVVVEMTHLATLYHDDVMDEAAKRRGVESANARWNNSVAILAGDILLAHVSR 139 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + + + + S L G++R+ D E Y+ VI+ KT VL ++A + Sbjct: 140 LMADLGT-DTVRHFSETFGDLVTGQMRETIGVGEGDPIEH-YMAVIREKTGVLIASAGYL 197 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +L +G +AL++YG +G+ FQ+VDD++D + + GK G D R G TLPV+ Sbjct: 198 GALHSGATADHIEALRAYGAAIGMVFQIVDDIIDIFSDSEDSGKTPGTDLREGVFTLPVL 257 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE----NRALVDTEYRAYSYGQKAK 295 A + T + ++T+ + + ++ + +RAL D + Y +A+ Sbjct: 258 YALREQTPIGEEL-RATLTGPVTDDTTVARVLDLLTQSTGRDRALADVHH----YLNEAE 312 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322 L LP ++ ++L ++ F +QR+ Sbjct: 313 AQLELLPQNATTEALRKLARFTVQRVG 339 >gi|298479711|ref|ZP_06997911.1| polyprenyl synthetase [Bacteroides sp. D22] gi|298274101|gb|EFI15662.1| polyprenyl synthetase [Bacteroides sp. D22] Length = 324 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 83/228 (36%), Positives = 130/228 (57%), Gaps = 10/228 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 ++Y++ GGKR+RP+L L + YR D + A AIE H TLLHDD++D S +R Sbjct: 31 IEYILSLGGKRIRPVLMLMGYNL--YREDVASIYDPATAIEVYHNHTLLHDDLMDRSDVR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---ETKSQEALEALSLVACTLAEGELRQL 148 RGK VW + T+VL GD +L AF + + +E ++ SL + EG+ + Sbjct: 89 RGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQEHLKEVMDLFSLTTLEICEGQQLDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE++Y+ +I+ KTAVL +A+L++ +++AG + L +GM++G+AFQL Sbjct: 149 EFESRCDVTEDEYIEMIRLKTAVLLAASLKIGAILAGATAEDAENLYHFGMHIGVAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFW 253 DD+LD G+ GK IG D K T +I A + ++++ N W Sbjct: 209 DDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALEHADEKQQEELNRW 256 >gi|326329624|ref|ZP_08195946.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Nocardioidaceae bacterium Broad-1] gi|325952620|gb|EGD44638.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Nocardioidaceae bacterium Broad-1] Length = 337 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 159/304 (52%), Gaps = 19/304 (6%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 S + + +L+ +GGKR RP+L L A + D + AC +E H A+L HDD Sbjct: 43 SSSPFVTEAASHLLEAGGKRFRPLLVLLAAECGPDTLADEVITAACIVELTHQASLYHDD 102 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA-- 141 V+D++ LRRG+ A + N ++L GDFL +++ + E +A+ + A T A Sbjct: 103 VMDEALLRRGEDTANARFDNHVAILTGDFLFARSSSLTAELGP----DAVRIQAATFAKL 158 Query: 142 -EGE-LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 EG+ L ++ ++ +D + +L V+ KT VL + + +L AG ++ AL +YG Sbjct: 159 VEGQILEGVAPAEGVDPVDH-HLEVLAGKTGVLIATSALYGALFAGADKEIQDALVAYGD 217 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 +G+AFQL DD+LD +E GK G D R G PTLPV+ F R + + + D Sbjct: 218 IVGVAFQLSDDILDIAS--DESGKTPGTDLREGVPTLPVL--FVRRSNEPGDARLLELLD 273 Query: 260 GKISVE-NLKKAFIIMRENRALVDTEYRAY--SYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 G ++ + L + ++R + AL E RAY + ++AK +L LP+ +K+L D Sbjct: 274 GDLTDDAALAECVALLRAHPAL--AEARAYVQARAEEAKAALAPLPEGPVRKALEAFADI 331 Query: 317 CLQR 320 R Sbjct: 332 VAVR 335 >gi|319949942|ref|ZP_08023938.1| polyprenyl synthetase [Dietzia cinnamea P4] gi|319436392|gb|EFV91516.1| polyprenyl synthetase [Dietzia cinnamea P4] Length = 344 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 101/324 (31%), Positives = 163/324 (50%), Gaps = 24/324 (7%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACA 70 +++V L++ R+ S + + +V +L+ +GGKR RP++TL A + E + V A Sbjct: 32 LDEVEKLLVSRLESGEDFLSEVALHLVTAGGKRFRPIVTLLAGEIGPEPDHERLVKAAVV 91 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 E IH ATL HDDV+D++++RRG +A W N T++L GDFL + + ++ + Sbjct: 92 CEMIHLATLYHDDVMDEASMRRGVESANSRWDNSTAILAGDFLFAHSSMLLADLGPA--- 148 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEED----YLHVIKSKTAVLFSAALEVSSLI 183 A+ L+A T AE G++R+ ++ + +ED YL VI KT L +AA + Sbjct: 149 -AVQLIAQTFAELVTGQMRE-TVGPGVGGRDEDAAQHYLRVIWEKTGSLIAAAAQFGGEY 206 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G L+ +G +GIAFQ+ DD++D E GK G D R G TLP+I A + Sbjct: 207 SGATGEQIARLRRFGDAVGIAFQIADDIIDIASPSAESGKTPGTDLREGVHTLPMIYAME 266 Query: 244 RG---TKREKNFWKSTINDGKISVENLK--KAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 G + R ++ + D E L+ + MR RA ++ Y A L Sbjct: 267 AGSPDSPRLRDLLAQPLTDDAEVAEALELLRVSDGMRRARATLE------KYVDDAMAEL 320 Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322 LP ++L +V F + R+ Sbjct: 321 DALPAGPANEALRRLVRFTVDRVG 344 >gi|257899830|ref|ZP_05679483.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com15] gi|257837742|gb|EEV62816.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com15] Length = 328 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 95/311 (30%), Positives = 163/311 (52%), Gaps = 15/311 (4%) Query: 20 LKRICSDVEM----IPDVVKYLIFSGGKRLRPMLTLA-TALMLEYRGDNHVLLACAIEFI 74 LKR+ V + + +K I +GGK LRP L + E D + LA +IE + Sbjct: 21 LKRMEETVRLKNKPVEQAIKETIHAGGKLLRPAYQLLFSQFGPEQDRDKAIALAASIEML 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATL+HDD+VD++ LRR + R +GN SV GD+L C + + +L++L Sbjct: 81 HTATLIHDDIVDEADLRRSQPNIRSQFGNVVSVYAGDYLF--VCCFKLLSDYSTSLKSLQ 138 Query: 135 LVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L + ++ + GEL Q+ N +++ ++YL I KTA LF + V + +G Sbjct: 139 LNSRSMEKVLNGELGQMDDRYNYELSVKEYLENISGKTAELFQLSCSVGAFESGTSERFA 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + G+++G+AFQ++DD+LDY E E+GK + ED R G +LP+I + Q+ + Sbjct: 199 KKAGDIGLSIGMAFQIIDDILDYTKESQEIGKPVLEDMRQGVYSLPLIYSLQKNKQTLLP 258 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW--KKS 309 + + + VE ++K I+ + + + A +Y ++A ++ LPD+S +++ Sbjct: 259 YLEKKTEMTEKDVEAVRK---IVERTGGVGEAKKLAAAYTERALKEIKKLPDTSLRTREN 315 Query: 310 LMEVVDFCLQR 320 L + L R Sbjct: 316 LFSLTQLILDR 326 >gi|325289830|ref|YP_004266011.1| Trans-hexaprenyltranstransferase [Syntrophobotulus glycolicus DSM 8271] gi|324965231|gb|ADY56010.1| Trans-hexaprenyltranstransferase [Syntrophobotulus glycolicus DSM 8271] Length = 322 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 108/320 (33%), Positives = 168/320 (52%), Gaps = 22/320 (6%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ KV + K + D ++ YL+ +GGKR+RP TL + Y + +A A Sbjct: 13 DLTKVEKELDKLLAVDDPILSKTCVYLLQAGGKRMRPGFTLLSGRFFNYDFKKILPVAMA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE IH ATL+HDDVVD S RRG+ WGN SV GDFL ++A M+ + Sbjct: 73 IELIHMATLVHDDVVDASLTRRGRPTLAAGWGNTVSVATGDFLFAKALEMIGKIDDPGVA 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ V+ + +GE++Q+ + ++ + Y + I+ KTA+L + + ++++ S+ Sbjct: 133 KILADVSVEMCQGEIQQIWSAFDVKQNFKQYYYRIRRKTALLIGLSCRLGAMVS--DGSL 190 Query: 191 RQA--LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 R L++YG LGIAFQ++DD+LD + +EMGK +G D R G TLP+I A Q R Sbjct: 191 RHMWLLETYGHCLGIAFQIIDDILDIIADPDEMGKPVGGDIRQGIMTLPMIYALQSSGHR 250 Query: 249 E--------KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 E KN ++ + + + +K + I R +R +VD Y KA L Sbjct: 251 ERLGQLLALKNKKEAQVQE---VIHMIKNSDGIER-SRTVVD------KYINKALKHLEE 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP KK+L E+ F +R Sbjct: 301 LPKIPAKKALRELAVFVGER 320 >gi|156540259|ref|XP_001602352.1| PREDICTED: similar to CG31005-PA [Nasonia vitripennis] Length = 426 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 98/328 (29%), Positives = 161/328 (49%), Gaps = 17/328 (5%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 ++LED D++ V I + + ++ E + + Y GK LRPM+ + A + Y Sbjct: 107 QLLED----DLKNVYEDIRRELVANTSHEELRTIATYYFGGQGKALRPMVAILMARAINY 162 Query: 60 RGDNHVLLACA------IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113 D LLA E IH A+L+HDDVVD S RRGK + +W + + GDF+ Sbjct: 163 DKDQSGLLASQRQVAMISEMIHNASLVHDDVVDQSDFRRGKPSVNALWSQKKVTMAGDFI 222 Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173 L+ A M+ ++ + LS V L +GE QL + + YL KTA L Sbjct: 223 LAVASMMIARLQNDDVTLTLSQVITDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLI 282 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + + + +++ G + + YG N+G+AFQLVDD+LD+ + MGK D + G Sbjct: 283 ANSAKAVAMLGGADERLAELAFQYGRNIGLAFQLVDDLLDFVSSSDAMGKPTAADLKLGL 342 Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293 T PV+ A +R + + G +++KAF ++ +++ L T + A + + Sbjct: 343 ATAPVLFACERFPELNPMIMRRFQEPG-----DVEKAFELVHKSQGLEQTRFLAKKHCVE 397 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A + L +S ++KSLM V D + R+ Sbjct: 398 AVRLAQTLAESPYQKSLMVVSDLVINRI 425 >gi|260174038|ref|ZP_05760450.1| putative isoprenyl synthetase [Bacteroides sp. D2] gi|315922307|ref|ZP_07918547.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696182|gb|EFS33017.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 324 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 84/228 (36%), Positives = 128/228 (56%), Gaps = 10/228 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 ++Y++ GGKR+RP+L L + YR D + A AIE H TLLHDD++D S +R Sbjct: 31 IEYILSLGGKRIRPVLMLMGYNL--YREDVASIYDPATAIEVYHNHTLLHDDLMDRSDVR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQL 148 RGK VW + T+VL GD +L AF + + E ++ SL + EG+ + Sbjct: 89 RGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLKEVMDLFSLTTLEICEGQQLDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE++Y+ +I+ KTAVL + +L++ +++AG + L ++GM++G+AFQL Sbjct: 149 EFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNFGMHIGVAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR---EKNFW 253 DD+LD G+ GK IG D K T +I A R ++ E N W Sbjct: 209 DDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALNRADEKQHAELNRW 256 >gi|167043397|gb|ABZ08099.1| putative Polyprenyl synthetase [uncultured marine microorganism HF4000_APKG1C9] Length = 575 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 91/302 (30%), Positives = 150/302 (49%), Gaps = 10/302 (3%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + +L GGKRLR ++ + D H L +IE IH TL+HDD++D Sbjct: 277 ERLHGAMTHLFAGGGKRLRAIIPRLVGEAVGEAHDGHYTLGASIEIIHNFTLVHDDIIDQ 336 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL------- 140 +RRG A + + + T++ GD +L+ F ++ E+ +A + L+ + T+ Sbjct: 337 DPIRRGLDAVHVAYDDATAINAGDAMLAVGFEILAESPEIDA-DKLAFLVSTIGEMVRKV 395 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 AEG+ + + VTEEDY+ +I KT+ +F +++AG + + + +G+N Sbjct: 396 AEGQQDDIEFEQRNTVTEEDYIAMITGKTSAMFETCATTGAILAGASDEIVDNMAIWGLN 455 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 LG+ FQL+DD++D G+ +GK G D GK TL I A NF + G Sbjct: 456 LGLCFQLMDDLIDITGDTETLGKPAGSDVVQGKRTLIAIHALASDLDL-PNF-RQVYGAG 513 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 S ++L A ++E+ + RA + A SL L D+ + L E+ DF L R Sbjct: 514 NCSDDDLAAAIRELQESGSTAYARDRAMHHHSLAHRSLELLDDNPAVQVLKELTDFQLIR 573 Query: 321 LN 322 +N Sbjct: 574 IN 575 >gi|22537877|ref|NP_688728.1| polyprenyl synthetase family protein [Streptococcus agalactiae 2603V/R] gi|76799379|ref|ZP_00781535.1| polyprenyl synthetase family protein [Streptococcus agalactiae 18RS21] gi|77408798|ref|ZP_00785527.1| polyprenyl synthetase family protein [Streptococcus agalactiae COH1] gi|22534773|gb|AAN00601.1|AE014270_19 polyprenyl synthetase family protein [Streptococcus agalactiae 2603V/R] gi|76585273|gb|EAO61875.1| polyprenyl synthetase family protein [Streptococcus agalactiae 18RS21] gi|77172579|gb|EAO75719.1| polyprenyl synthetase family protein [Streptococcus agalactiae COH1] Length = 326 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 93/316 (29%), Positives = 163/316 (51%), Gaps = 9/316 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVL-- 66 K++++ N LI +RI + I + L +GGK+LRP L + L + D L Sbjct: 13 KNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGNKENQDTQQLKK 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A ++E +H ATL+HDDV+DDS LRRG + + +G +V GD L + F +++E+ + Sbjct: 73 IAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTGDLLFTVFFDLILESMA 132 Query: 127 QEALEALSLVAC-TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++ + + GEL Q+ L N YL I KTA LF A + + G Sbjct: 133 DTPFMRINAKSMRKILMGELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGG 192 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + V + G N+G+ FQ++DD+LDY + K + ED G +LP++LA + Sbjct: 193 AEKEVVRLAGHIGFNIGMTFQILDDILDYTADKKTFNKPVLEDLAQGIYSLPLLLAIEEN 252 Query: 246 TKREKNFWKSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + +K ++ ++ E+++K ++ +R + + A + +KA + LP S Sbjct: 253 P----DIFKPILDKKTDMATEDMEKIAYLVVSHRGVDKARHLARKFTEKAISDINKLPQS 308 Query: 305 SWKKSLMEVVDFCLQR 320 S KK L+++ ++ L+R Sbjct: 309 SAKKQLLQLTNYLLKR 324 >gi|295663240|ref|XP_002792173.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides brasiliensis Pb01] gi|226279348|gb|EEH34914.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides brasiliensis Pb01] Length = 533 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 97/278 (34%), Positives = 144/278 (51%), Gaps = 23/278 (8%) Query: 58 EYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112 + +GD ++L LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDF Sbjct: 262 QVQGDRNILPSQRRLAEITEVIHTASLLHDDVIDNAVTRRSSVSANLEFGNKMAVLAGDF 321 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED----------YL 162 LL +A + + E +E ++ V L EGE QL +N ++ EE+ YL Sbjct: 322 LLGRASVALARLRDPEVIELVATVIANLIEGEFMQL---RNTELDEENPFFTEEAIAYYL 378 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 K+A L S + ++L+ V +A SYG NLG+AFQLVDD+LDY E+G Sbjct: 379 QKTYLKSASLISKSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLDYTISGEELG 438 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282 K G D G T P++ A++ + + +G + + A I+ ++ L Sbjct: 439 KPAGADLELGLATAPLLFAWRGHPELGALVGRKFRREGDVQL-----ARQIVAQSDGLEQ 493 Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 T A Y KA +S+ LPDS K L+E+ QR Sbjct: 494 TRALAQEYTDKAIESISILPDSEAKAGLIEMCAKLTQR 531 >gi|237720117|ref|ZP_04550598.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229450669|gb|EEO56460.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 324 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 84/228 (36%), Positives = 128/228 (56%), Gaps = 10/228 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 ++Y++ GGKR+RP+L L + YR D + A AIE H TLLHDD++D S +R Sbjct: 31 IEYILSLGGKRIRPVLMLMGYNL--YREDVASIYDPATAIEVYHNHTLLHDDLMDRSDVR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQL 148 RGK VW + T+VL GD +L AF + + E ++ SL + EG+ + Sbjct: 89 RGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLKEVMDLFSLTTLEICEGQQLDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE++Y+ +I+ KTAVL + +L++ +++AG + L ++GM++G+AFQL Sbjct: 149 EFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNFGMHIGVAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR---EKNFW 253 DD+LD G+ GK IG D K T +I A R ++ E N W Sbjct: 209 DDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALNRADEKQHAELNRW 256 >gi|255534882|ref|YP_003095253.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium 3519-10] gi|255341078|gb|ACU07191.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium 3519-10] Length = 323 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 99/303 (32%), Positives = 153/303 (50%), Gaps = 24/303 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D + Y+I GGKRLRP++ L M + A AIEF H TL+HDD++D++ LR Sbjct: 29 DPMNYIISHGGKRLRPIMVLMANDMFGGDIQKAIKPALAIEFFHNFTLIHDDIMDEAPLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---------LAE 142 R K + G +L GD LL +++ K E LE AC L E Sbjct: 89 RNKPTIHTLHGLNAGILSGDALLLKSY------KFFEDLEPELFKACIRVFTHTGLLLCE 142 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+ ++ DVT DY+ +I KT VL +++ E+ +LIAG +A+ ++G NLG Sbjct: 143 GQQYDINFETLGDVTFNDYIRMITYKTGVLTASSFEIGALIAGSDFKDAKAIFNFGKNLG 202 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFWKSTIND 259 IAFQ++DD LD G+ + GK D K T+ +LA + GT+ E+ ++W + D Sbjct: 203 IAFQIMDDYLDVFGDQEQFGKKHAGDIYENKKTVLYLLAKEHGTEEEQKELDYWYAKKTD 262 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDSSWKKSLMEVVDFC 317 V +++K F R + T + Y + A+ L +PD KK +E+ ++ Sbjct: 263 NVDKVYSVEKIF---RRTKVDEKTLHLIQKYNEIAQGYLNRINVPDEK-KKPFVELANYL 318 Query: 318 LQR 320 L+R Sbjct: 319 LRR 321 >gi|300857719|ref|YP_003782702.1| geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis FRC41] gi|300685173|gb|ADK28095.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis FRC41] gi|302205461|gb|ADL09803.1| Putative polyprenyldiphosphate synthase component [Corynebacterium pseudotuberculosis C231] Length = 339 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 99/327 (30%), Positives = 166/327 (50%), Gaps = 21/327 (6%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 ED++ M +V L+ K +C + I + VK+L +GGKR RPM AL+ GD+ Sbjct: 25 EDIS-AGMTRVEELLQKELCVGEDFIVEKVKHLANAGGKRFRPMF----ALLASQYGDHP 79 Query: 65 VL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V A +E H ATL HDDV+D++A RRG +A W N ++L GD LL+ Sbjct: 80 VSEDVIKAAVVVEMTHLATLYHDDVMDEAAKRRGVESANARWNNSVAILAGDILLAHVSR 139 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + + + + S L G++R+ D E Y+ VI+ KT VL ++A + Sbjct: 140 LMADLGT-DTVRHFSETFGDLVTGQMRETIGVGEGDPIEH-YMAVIREKTGVLIASAGYL 197 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +L +G +AL++YG +G+ FQ+VDD++D + + GK G D R G TLPV+ Sbjct: 198 GALHSGATADHIEALRAYGAAIGMVFQIVDDIIDIFSDSEDSGKTPGTDLREGVFTLPVL 257 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE----NRALVDTEYRAYSYGQKAK 295 A + T + ++T+ + + ++ + +RAL D + Y +A+ Sbjct: 258 YALREQTPIGEEL-RATLTGPVTDDTTVARVLDLLTQSTGRDRALADVHH----YLNEAE 312 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322 L LP ++ ++L + F +QR+ Sbjct: 313 AQLELLPQNATTEALRNLARFTVQRVG 339 >gi|255326766|ref|ZP_05367842.1| bifunctional short chain isoprenyl diphosphate synthase [Rothia mucilaginosa ATCC 25296] gi|255295983|gb|EET75324.1| bifunctional short chain isoprenyl diphosphate synthase [Rothia mucilaginosa ATCC 25296] Length = 353 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 155/306 (50%), Gaps = 8/306 (2%) Query: 20 LKRICSDVEMIPDVV-KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 L + + + DV ++L+ +GGKR+RP+L L A + D + A +E H AT Sbjct: 49 LAEAIAQTDHLADVASRHLLSAGGKRVRPLLALLCAAVDGEINDEVIEAAVVVELTHLAT 108 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+DD+ RRG +A+++WGN ++L GD + S+A +V E ++ ++ S Sbjct: 109 LYHDDVMDDAPKRRGVDSAQMIWGNSVAILTGDLIFSRASLLVSELGTRP-MKIQSQTFE 167 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G+L + + + + Y+ VI+ KT L +AA E SL++G + +K+YG Sbjct: 168 RLVLGQLFETTGPREGQDLLDHYIAVIEGKTGSLIAAAGEYGSLLSGASEDIISMVKAYG 227 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL---AFQRGTKREKNFWKS 255 +G+AFQL DDV+D + GK G D R G PTLP IL A G E Sbjct: 228 ELVGVAFQLADDVIDIVSDGKTSGKTRGTDLREGVPTLPTILLDRAVAAGD--ESAIAVR 285 Query: 256 TINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 + D +S E L+ A + + + AY + +A ++ LP+S+ K +L Sbjct: 286 ALLDADLSSDEALETAVEALAAHPVTQEAWQIAYDWADRAIAAIAPLPESTAKAALESFA 345 Query: 315 DFCLQR 320 + R Sbjct: 346 HAVVHR 351 >gi|293373955|ref|ZP_06620297.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f] gi|292631176|gb|EFF49812.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f] Length = 342 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 84/228 (36%), Positives = 128/228 (56%), Gaps = 10/228 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 ++Y++ GGKR+RP+L L + YR D + A AIE H TLLHDD++D S +R Sbjct: 49 IEYILSLGGKRIRPVLMLMGYNL--YREDVASIYDPATAIEVYHNHTLLHDDLMDRSDVR 106 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQL 148 RGK VW + T+VL GD +L AF + + E ++ SL + EG+ + Sbjct: 107 RGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLKEVMDLFSLTTLEICEGQQLDM 166 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE++Y+ +I+ KTAVL + +L++ +++AG + L ++GM++G+AFQL Sbjct: 167 EFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNFGMHIGVAFQLQ 226 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR---EKNFW 253 DD+LD G+ GK IG D K T +I A R ++ E N W Sbjct: 227 DDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALNRADEKQHAELNRW 274 >gi|253570683|ref|ZP_04848091.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251839632|gb|EES67715.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 324 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 88/251 (35%), Positives = 135/251 (53%), Gaps = 10/251 (3%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEF 73 N L +I E + + ++Y++ GGKR+RP+L L + Y+ D + A IE Sbjct: 13 NHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNL--YKEDVSSIYDPATGIEV 70 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EAL 130 H TLLHDD++D S +RRGK VW + T++L GD +L AF V + E + Sbjct: 71 YHNHTLLHDDLMDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAPEHLKEVI 130 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + SL A + EG+ + DV E++Y+ +I+ KTAVL +A+L++ +++AG Sbjct: 131 DLFSLTALEICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASLKIGAILAGASAVD 190 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK--- 247 + L ++GM +G+AFQL DD+LD G+ GK IG D K T +I A +R Sbjct: 191 AENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKRIGGDILCNKKTYMLIKALERANGEQL 250 Query: 248 REKNFWKSTIN 258 E N W + N Sbjct: 251 EELNRWLNAEN 261 >gi|320334064|ref|YP_004170775.1| trans-hexaprenyltranstransferase [Deinococcus maricopensis DSM 21211] gi|319755353|gb|ADV67110.1| Trans-hexaprenyltranstransferase [Deinococcus maricopensis DSM 21211] Length = 316 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 151/292 (51%), Gaps = 15/292 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHD 82 S VE I + L+ +GGKR RP LT AL L+ H + A A+E +H+A+LLHD Sbjct: 22 SQVEFIELIGDDLVTAGGKRTRPALTYLAFRALGLDAHPQEHDV-AVAVELLHSASLLHD 80 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 D++DD+ RRG A +GN SV+ GD++LS+ ++ T + + A A + E Sbjct: 81 DLIDDADTRRGAPTAFRRFGNVVSVMSGDYMLSKLLVLLAST-TPGLVRAFGETAAHVCE 139 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q ++ + + E YL+VI KTA L A +L+ G ++ ++AL +G G Sbjct: 140 GEVLQFQVAAYGEYSHEHYLNVIYGKTAALVELAASAPALLVGASDAHQRALADFGREYG 199 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV--ILAFQRGTKREKNFWKSTINDG 260 +AFQ+ DD+LD G +GK +G D R GK TLP+ +L G + + ++G Sbjct: 200 MAFQMQDDLLDLAGTEALIGKPVGGDLREGKATLPILYLLEGPDGDEVRAILERRAAHEG 259 Query: 261 KIS-VENLKKAFIIMRENRALV-DTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + V L A + RA + D RA + +LR LP S + L Sbjct: 260 DVDRVRALAFAQGAVDRTRAAIQDRALRAVT-------ALRALPASPARDRL 304 >gi|256811061|ref|YP_003128430.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86] gi|256794261|gb|ACV24930.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86] Length = 317 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 97/294 (32%), Positives = 159/294 (54%), Gaps = 14/294 (4%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 K+L+F+GGKR+RP L + T ++ + + + A A+E IH TL+HDD++D RRGK Sbjct: 30 KHLLFAGGKRIRPYLAVVTYMLKKDDIEEVLPAAAAVELIHNYTLIHDDIMDHDDERRGK 89 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACTLAEGELRQLSL 150 +V+G ++L GD L ++AF V + K+ E L+ LS + EG+ + Sbjct: 90 PTVHVVFGEPMAILAGDLLYAKAFEAVSKIKDNKKAHEVLKILSKACVEVCEGQAMDMEF 149 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 N T ++YL +I+ KT L A++E+ +++A R ALK Y +G+ FQ+ DD Sbjct: 150 E-NYYPTMDEYLEMIRKKTGALLEASVEIGAVMADCNEEERNALKEYAKRIGLTFQIQDD 208 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 VLD G+ ++GK +G D R GK T+ VI A + + +K + + + I E +K+A Sbjct: 209 VLDLIGDEKKLGKPVGSDIREGKKTIIVIHALKTLDEDKKKRLLNILGNKDIKDEEIKEA 268 Query: 271 FIIMRENRALVDTEYRAYSYGQK---AKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 I++ + EY QK AK+ L+ D +K L ++ DF + R+ Sbjct: 269 IEILKPS-----IEYAKELMKQKTEEAKEYLKIF-DKDRRKVLEDLADFIISRI 316 >gi|315022294|gb|EFT35322.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM] Length = 323 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 100/333 (30%), Positives = 167/333 (50%), Gaps = 25/333 (7%) Query: 1 MKML---EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 MK L +DL + +EK F ++ + + + + Y+I GGKRLRP++ L + Sbjct: 1 MKFLDRYQDLVAEAIEKHQFK------NEPKELYEPMNYIISHGGKRLRPIMVLMGCELF 54 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 + + A AIEF H TL+HDD++D + LRR K + G +L GD LL +A Sbjct: 55 GGSLEKAMKPALAIEFFHNFTLIHDDIMDGAPLRRNKPTIHTLHGINVGILSGDALLIKA 114 Query: 118 FCMVIETKSQ---EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 + + + + + + S L EG+ ++ N +VT EDY+ +I KT VL + Sbjct: 115 YQFFEDLEPELFKKCITLFSETGAVLCEGQQMDVNFETNSNVTYEDYIKMITYKTGVLSA 174 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A+ ++ ++IAG +AL +G ++GIAFQ++DD LD G + GK D K Sbjct: 175 ASFKIGAMIAGATEQEAEALYQFGKHIGIAFQIMDDYLDVFGNQEQFGKKHAGDIFENKK 234 Query: 235 TLPVILAFQRGTKREK---NFWKSTINDGKISVENLKKAFIIMRENRALVDTEY--RAYS 289 T+ +LA + T+ E+ N+W S D + ++K F R VD + Sbjct: 235 TVLYLLAMENATEEERKELNYWYSKKTDNIDKIYCVEKIF-----RRTKVDEKVLRLIQK 289 Query: 290 YGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQR 320 + Q +D L+ LP+ K+ +E+ ++ L+R Sbjct: 290 HNQIGQDCLKTINLPEDK-KQPFIELANYLLKR 321 >gi|29347468|ref|NP_810971.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|29339368|gb|AAO77165.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron VPI-5482] Length = 324 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 88/251 (35%), Positives = 136/251 (54%), Gaps = 10/251 (3%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEF 73 N L +I E + + ++Y++ GGKR+RP+L L + Y+ D + A IE Sbjct: 13 NHLSEIQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNL--YKEDVSSIYDPATGIEV 70 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EAL 130 H TLLHDD++D S +RRGK VW + T++L GD +L AF V + E + Sbjct: 71 YHNHTLLHDDLMDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAPEHLKEVI 130 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + SL A + EG+ + DV E++Y+ +I+ KTAVL +A+L++ +++AG + Sbjct: 131 DLFSLTALEICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASLKIGAILAGASAAD 190 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK--- 247 + L ++GM +G+AFQL DD+LD G+ GK IG D K T +I A +R Sbjct: 191 AENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALERANGEQL 250 Query: 248 REKNFWKSTIN 258 E N W + N Sbjct: 251 EELNRWLNADN 261 >gi|160882687|ref|ZP_02063690.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483] gi|299147995|ref|ZP_07041058.1| polyprenyl synthetase [Bacteroides sp. 3_1_23] gi|156111857|gb|EDO13602.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483] gi|298514178|gb|EFI38064.1| polyprenyl synthetase [Bacteroides sp. 3_1_23] Length = 342 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 84/228 (36%), Positives = 128/228 (56%), Gaps = 10/228 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 ++Y++ GGKR+RP+L L + YR D + A AIE H TLLHDD++D S +R Sbjct: 49 IEYILSLGGKRIRPVLMLMGYNL--YREDVASIYDPATAIEVYHNHTLLHDDLMDRSDVR 106 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQL 148 RGK VW + T+VL GD +L AF + + E ++ SL + EG+ + Sbjct: 107 RGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLKEVMDLFSLTTLEICEGQQLDM 166 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE++Y+ +I+ KTAVL + +L++ +++AG + L ++GM++G+AFQL Sbjct: 167 EFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNFGMHIGVAFQLQ 226 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR---EKNFW 253 DD+LD G+ GK IG D K T +I A R ++ E N W Sbjct: 227 DDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALNRADEKQHAELNRW 274 >gi|85094730|ref|XP_959949.1| decaprenyl-diphosphate synthase subunit 1 [Neurospora crassa OR74A] gi|60389720|sp|Q7S565|COQ1_NEUCR RecName: Full=Probable hexaprenyl pyrophosphate synthase, mitochondrial; Short=HPS; Flags: Precursor gi|28921406|gb|EAA30713.1| decaprenyl-diphosphate synthase subunit 1 [Neurospora crassa OR74A] Length = 449 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 97/267 (36%), Positives = 134/267 (50%), Gaps = 24/267 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + + Sbjct: 192 LAEITELIHTASLLHDDVIDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALARLRH 251 Query: 127 QEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E L+ V L EGE QL + KN +EE YL KTA L S + Sbjct: 252 AEVVELLATVIANLVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYLKTASLISKSCRA 311 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+L+ G + A YG NLG+AFQLVDD+LDY E+GK G D G T P++ Sbjct: 312 SALLGGADAATVDAAYLYGKNLGLAFQLVDDMLDYTRSEKELGKPAGADLELGLATAPLL 371 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKK------AFIIMRENRALVDTEYRAYSYGQK 293 A WK+ G + +K A ++ ++ + T A Y +K Sbjct: 372 FA-----------WKTMPELGPLVGRKFEKEGDAARARELVLQSNGIEQTRALAQDYAEK 420 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A +++ PDS K L+E+ L+R Sbjct: 421 AIEAISGFPDSEAKDGLIEMAVKTLKR 447 >gi|195953287|ref|YP_002121577.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1] gi|195932899|gb|ACG57599.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 312 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 9/308 (2%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 +++ + + + S V+ I I +GGKR+RP+L + L D ++L C IE Sbjct: 12 KRIELALSENLDSSVDTILKAGNSTIEAGGKRIRPLLLVYLVESLGGDVDKAIILGCGIE 71 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 +IH A+LLHDDVVD + RRGK + V+G + +VL GD+L ++A + + + ++ Sbjct: 72 YIHIASLLHDDVVDKADSRRGKPSVNKVFGQEAAVLTGDYLYAKALFLYANYGNAKMIDI 131 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 LS +AEG+L +L ++ + E+ Y +I KTA L A V +LI+ + + Sbjct: 132 LSKAVMNMAEGQLLELKSIGSI-IDEKTYFDIIDGKTAYLIGACFGVGALISNYEE--YE 188 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 G+ LG AFQL+DD LDY + ++GK D + GK T PVI K +K Sbjct: 189 KFFDIGLKLGRAFQLIDDALDYEVDSQKLGKPSRNDLKEGKVTYPVISMLD---KLDKEL 245 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 K+ + S E L + E ++ T+ A+ ++ K L P + LME Sbjct: 246 LKNILVSQNPSQEELDSIIDTVIEKGGVMRTKELAFRLLEEVKQELSYYP---ITEKLME 302 Query: 313 VVDFCLQR 320 +++ ++R Sbjct: 303 LIEKTVKR 310 >gi|227487152|ref|ZP_03917468.1| possible trans-hexaprenyltranstransferase [Corynebacterium glucuronolyticum ATCC 51867] gi|227541680|ref|ZP_03971729.1| possible trans-hexaprenyltranstransferase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092810|gb|EEI28122.1| possible trans-hexaprenyltranstransferase [Corynebacterium glucuronolyticum ATCC 51867] gi|227182648|gb|EEI63620.1| possible trans-hexaprenyltranstransferase [Corynebacterium glucuronolyticum ATCC 51866] Length = 340 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 158/313 (50%), Gaps = 4/313 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLA 68 +D+++V L+ K + + + + V +L +GGKR RPM LA+ L ++ + A Sbjct: 30 RDLQRVEELLQKELNHGEDFVNEKVIHLAAAGGKRFRPMFAVLASQLGTRASCEDVIKAA 89 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E H ATL HDDV+D++ RRG +A WGN ++L GD LL+ A ++ T + Sbjct: 90 TVVEMTHLATLYHDDVMDEADRRRGVESANARWGNSVAILAGDILLAHA-SRLMATLGTD 148 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + L G++R+ + D E YL+V+ KT VL S+A + +L G Sbjct: 149 TVAHFAQTFGDLVTGQMRETVGPGDGDKIEH-YLNVVHEKTGVLISSAGYLGALHGGCSP 207 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + +AL+ +G+ +G FQ+VDD++D + GK G D R G TLPV+ A + + Sbjct: 208 EITRALQQFGVYIGTIFQIVDDIIDIFSASEQSGKTRGTDLREGVFTLPVLFALKDESPA 267 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + + + S +++++A ++ + + KA D L LPD + Sbjct: 268 GEEL-RGLLAGPLTSDDDVERALALIEQTSGREQALEVVQQFTDKAFDELSTLPDGPVRS 326 Query: 309 SLMEVVDFCLQRL 321 +L + ++ + R+ Sbjct: 327 ALRSLTEYSISRV 339 >gi|189463880|ref|ZP_03012665.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM 17393] gi|189438453|gb|EDV07438.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM 17393] Length = 324 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 83/226 (36%), Positives = 124/226 (54%), Gaps = 6/226 (2%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V+Y++ GGKR+RP+L L + + A IE H TLLHDD++D + RRG Sbjct: 31 VEYVLSMGGKRIRPVLMLMAYNLYQEDVTRIYAPAIGIEVYHNYTLLHDDLMDRADRRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQLSL 150 K VW + T++L GD +L A+ + E +E ++ SL A + EG+ + Sbjct: 91 KETVHKVWNDNTAILSGDAMLILAYQFMAECSPSFLKEVMDLFSLTALEICEGQQMDMEF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + DV E+YL +I+ KTAVL +A+L + + + G L +GM +G+AFQL DD Sbjct: 151 EQRNDVAAEEYLEMIRLKTAVLLAASLRIGARLGGASVEDADRLYDFGMQIGVAFQLKDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG--TKREK-NFW 253 +LD G V GKNIG D K T +I AF+ ++RE+ N+W Sbjct: 211 LLDVYGNVKVFGKNIGGDILCNKKTYMLIKAFEHADSSQREQLNYW 256 >gi|224536141|ref|ZP_03676680.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus DSM 14838] gi|224522223|gb|EEF91328.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus DSM 14838] Length = 324 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 86/230 (37%), Positives = 127/230 (55%), Gaps = 7/230 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA--IEFIHTATLLHDDVVDDSALR 91 V+Y++ GGKR+RP+L L + Y+ D + A A IE H TLLHDD++D + R Sbjct: 31 VEYVLSMGGKRIRPVLMLLAYNL--YKEDVTRIYAPATGIEVYHNYTLLHDDLMDRADRR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQL 148 RGK VW + T++L GD +L A+ + E S +E ++ SL A + EG+ + Sbjct: 89 RGKETVHKVWNDNTAILSGDAMLVLAYQFMAECPSTFLKEVMDLFSLTALEICEGQQMDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + DVT E+YL +I+ KTAVL +A+L++ + + G L +GM++G+AFQL Sbjct: 149 EFEQRNDVTAEEYLEMIRLKTAVLLAASLKIGARLGGASVEDADRLYDFGMHIGVAFQLK 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 DD+LD G GKNIG D K T +I A + + N S IN Sbjct: 209 DDLLDVYGNAKVFGKNIGGDILCNKKTYMLIKALEHANADQHNQLNSWIN 258 >gi|284162658|ref|YP_003401281.1| dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631] gi|284012655|gb|ADB58608.1| Dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631] Length = 327 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 151/290 (52%), Gaps = 13/290 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 +LI +GGKRLRP+LTL + + + A AIE IH TL+HDD++D RRG Sbjct: 44 HLIKAGGKRLRPVLTLLSCEAIGRDWKPILPSAIAIELIHNFTLIHDDIMDKDEYRRGVP 103 Query: 96 AARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAEGELRQLSL 150 ++G T++L GD L ++AF C V A+E ++ V + EG+ + Sbjct: 104 TVHRLFGEATAILAGDTLFAKAFEILSKCNVEAENVIRAVEVIADVCVKICEGQYMDMEF 163 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 K DV+ EDYL +++ KT VL + + + +++ G + V+ L +G+N GI FQ+ DD Sbjct: 164 EKRDDVSVEDYLKMVEKKTGVLIACSCSIPAVLYGEEKYVK-PLWDFGLNCGIGFQIHDD 222 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 VLD G ++GK+ D GK T+ + A + G + + GK S + ++A Sbjct: 223 VLDLVGG-EKIGKDWCSDLVEGKKTIVYLRAREMGVEID------IFGKGKASDDEKRRA 275 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++E A+ A + ++ K L LPDS+ K LM + D+ + R Sbjct: 276 VEKLKECGAIDFASEMAKEFVERGKKYLDVLPDSNAKNVLMLLADYLVTR 325 >gi|72163080|ref|YP_290737.1| trans-hexaprenyltranstransferase [Thermobifida fusca YX] gi|71916812|gb|AAZ56714.1| trans-hexaprenyltranstransferase [Thermobifida fusca YX] Length = 334 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 96/318 (30%), Positives = 161/318 (50%), Gaps = 19/318 (5%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++E+V ++ + ++ + +L+ +GGKR R +L L +A + + V A Sbjct: 26 ELEQVEKVLRDAVAESDPLLREAASHLLEAGGKRFRAILVLLSARFGDATNPDLVSAAAV 85 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E H ATL HDDV+D++ LRRG +A WGN ++L GD++ ++A ++ + + Sbjct: 86 VELTHVATLYHDDVMDEAELRRGSPSANRRWGNTIAILTGDYVFARASEILADLGT---- 141 Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 EA+ L A T L G++ + + + + YL VI KTA L +++ +++ Sbjct: 142 EAVRLQAQTFGRLVRGQILETAGPRPGVDPMKHYLDVIADKTASLIASSARFGAMVGNAD 201 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 V + L G LG+AFQL DD+LD E E GK G D R G TLP++ A Q GT+ Sbjct: 202 PEVVETLTRAGDALGMAFQLSDDILDVASETEESGKTPGTDLREGVLTLPMLYALQ-GTE 260 Query: 248 REKNFWKS----TIND-GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 E +S +ND L +A M E RA + ++G++A+ L LP Sbjct: 261 PEHARLRSLLGRPLNDEEAAEALALLRAHPAMDEARADL------AAWGERAQAELATLP 314 Query: 303 DSSWKKSLMEVVDFCLQR 320 + K + + + D+ + R Sbjct: 315 ECPAKTAFLAICDYVVNR 332 >gi|242373777|ref|ZP_04819351.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis M23864:W1] gi|242348514|gb|EES40116.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis M23864:W1] Length = 332 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 81/236 (34%), Positives = 128/236 (54%), Gaps = 2/236 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVLLA 68 +++KV + I S + + D +L+ SGGKR+RP+ + ++ + + +N +A Sbjct: 22 EIKKVEDRLQHAIKSSDQTLEDAAFHLLSSGGKRVRPVFVILSSQFGDSKDTSENTYRVA 81 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRG+ W T++L G+FLL+ + E K Sbjct: 82 VALELIHMATLVHDDVIDKSDKRRGRPTISKKWDQTTAILTGNFLLALGLQHLSEIKDSR 141 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +S + +GEL Q N D +YL I KTA+L A EV +L + + Sbjct: 142 VHNIISKSIVDVCKGELFQFQDQFNSDQNITNYLRRINRKTALLIQLATEVGALTSNASD 201 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV+L ++ Sbjct: 202 EVVRKLKMIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPVLLEMRK 257 >gi|16803969|ref|NP_465454.1| hypothetical protein lmo1930 [Listeria monocytogenes EGD-e] gi|224501271|ref|ZP_03669578.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes FSL R2-561] gi|254827185|ref|ZP_05231872.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL N3-165] gi|254831469|ref|ZP_05236124.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes 10403S] gi|254899373|ref|ZP_05259297.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes J0161] gi|254912488|ref|ZP_05262500.1| heptaprenyl diphosphate syntase component II [Listeria monocytogenes J2818] gi|254936815|ref|ZP_05268512.1| heptaprenyl diphosphate synthase [Listeria monocytogenes F6900] gi|255025694|ref|ZP_05297680.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes FSL J2-003] gi|16411383|emb|CAD00008.1| lmo1930 [Listeria monocytogenes EGD-e] gi|258599568|gb|EEW12893.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL N3-165] gi|258609410|gb|EEW22018.1| heptaprenyl diphosphate synthase [Listeria monocytogenes F6900] gi|293590470|gb|EFF98804.1| heptaprenyl diphosphate syntase component II [Listeria monocytogenes J2818] Length = 321 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 103/283 (36%), Positives = 151/283 (53%), Gaps = 12/283 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLLHDDVVDDSALRRGK 94 +L+ +GGKR+RPM +A + N V A AIE IH A+++HDDVVDD+ LRRG+ Sbjct: 39 HLLEAGGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGR 98 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 + WGN ++ GDFL +++ + E K A + LS V L+ GE+ QL N Sbjct: 99 ETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNF 158 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 D + +YL IK KTA+L +A+ + +++G + Q L +G +G+AFQ+ DDVLD+ Sbjct: 159 DQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDF 218 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274 G E+GK GED R G TLPV A E F K I+ +I+ E + ++ Sbjct: 219 VGTEKELGKPAGEDLRQGNVTLPVFFAM------EDPFLKKRIS--QITEETPAEEIAVL 270 Query: 275 RE---NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 E E A +Y +KA + L LP K L ++V Sbjct: 271 VEEVKKTGAKQAEDVATTYLKKAVEILDSLPQVPELKPLKQIV 313 >gi|325955638|ref|YP_004239298.1| polyprenyl synthetase [Weeksella virosa DSM 16922] gi|323438256|gb|ADX68720.1| Polyprenyl synthetase [Weeksella virosa DSM 16922] Length = 323 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 83/253 (32%), Positives = 138/253 (54%), Gaps = 12/253 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP++ L M ++ V A A+E+ H TL+HDD++D + LRRG Sbjct: 31 IEYILGIGGKRIRPLIVLMGNQMFNGLIEDAVKPAIAMEYFHNFTLMHDDIMDSAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQLSL 150 K A + +G +++L GD +L +A+ ++ + + +EA+ + A L EG+ ++ Sbjct: 91 KEAVHIKYGINSAILSGDTMLIRAYELLEDLPNDVFKEAIRLFNKTAIELCEGQQYDVNY 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 +++ EDY +IK KTAVL A L++ +LIAG L G+NLGIA+QL DD Sbjct: 151 ETQKEISFEDYYKMIKGKTAVLVGACLKLGALIAGAPKEEADRLYEIGLNLGIAYQLKDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN---FWKSTINDGKISVENL 267 LD G ++GK D K T+ + A Q +E++ +W + I EN+ Sbjct: 211 YLDVFGTSVKIGKKHAGDIYENKKTILFVTALQNADAKERDELLYWYN------IKAENI 264 Query: 268 KKAFIIMRENRAL 280 K + + + R L Sbjct: 265 DKVYAVEKLYRKL 277 >gi|218245257|ref|YP_002370628.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8801] gi|257058290|ref|YP_003136178.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8802] gi|218165735|gb|ACK64472.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8801] gi|256588456|gb|ACU99342.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8802] Length = 323 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 96/291 (32%), Positives = 156/291 (53%), Gaps = 10/291 (3%) Query: 35 KYLIFSGGKRLRPMLTL--ATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP + L + A MLE H LA E IHTA+L+HDDVVD++ LR Sbjct: 38 EHLFDAGGKRIRPAIVLLVSRATMLEREITPRHRRLAEITEMIHTASLVHDDVVDEAELR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 R ++ N+ +VL GDFL +Q+ + + E ++ LS V AEGE+ Q Sbjct: 98 RNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEILQGINR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +T E YL KTA L + + + +++++ + L YG +LG+AFQ+VDD+ Sbjct: 158 FDTTLTLEAYLEKSYYKTASLIANSAKAAAVLSDSPREMIDHLYDYGRDLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE-NLKKA 270 LD+ +GK G D +G T P + A E+ + T+ + + S E +++KA Sbjct: 218 LDFTTPTEVLGKPSGSDLISGNITAPALFAM------EEQPYLETLIEREFSEEGDIEKA 271 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +++ E++ + + A + Q A L CL S + L ++VD+ L RL Sbjct: 272 LLLVEESQGITRSRELAAHHAQLALKHLDCLAPSPSAQVLKDLVDYVLSRL 322 >gi|255691323|ref|ZP_05414998.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565] gi|260622965|gb|EEX45836.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565] Length = 324 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 84/228 (36%), Positives = 126/228 (55%), Gaps = 10/228 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 V+Y + GGKR+RP+L L + YR D + A AIE H TLLHDD++D S +R Sbjct: 31 VEYTLSLGGKRIRPVLMLMAYNL--YREDVASIYEPAAAIEVYHNHTLLHDDLMDRSDMR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQL 148 RGK VW + T+VL GD +L AF + ++ E ++ SL + EG+ + Sbjct: 89 RGKPTVHKVWNDNTAVLSGDAMLILAFRYMTACPAEHLKEVMDLFSLTMLEICEGQQLDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE++Y+ +I+ KTAVL + +L++ +++AG + L +GM +G+AFQL Sbjct: 149 EFESRGDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYKFGMQIGVAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFW 253 DD+LD G+ GK IG D K T +I A R +++ N W Sbjct: 209 DDLLDVYGDPEVFGKKIGGDILCNKKTYMLIKALDRADAKQREELNRW 256 >gi|330465216|ref|YP_004402959.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] gi|328808187|gb|AEB42359.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] Length = 316 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 97/316 (30%), Positives = 148/316 (46%), Gaps = 9/316 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +E V + + S + + ++L +GGKR RP+L A + V A + Sbjct: 5 LEAVEAELRDTVASADPFVTEAARHLADAGGKRFRPLLVALGAQFGDPSRAEIVSAAVVV 64 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D++ +RRG +A W N ++LVGD+L ++A + E E Sbjct: 65 ELTHLATLYHDDVMDEAPVRRGAPSANSRWTNSVAILVGDYLFARAADVAAELGP----E 120 Query: 132 ALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A+ L A T A G++ + + D YL VI KT L + + L +G Sbjct: 121 AVRLQARTFARLVHGQIAETVGPRAGDDPVTHYLRVIAEKTGSLIATSAHFGGLFSGATP 180 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 AL YG +G+AFQL DD+LD E E GK G D R G PTLPV+ A Sbjct: 181 EHVAALAGYGETIGVAFQLSDDLLDIASESTESGKTPGTDLREGVPTLPVLYALAADDTD 240 Query: 249 EKNF-WKSTINDGKISVENLK-KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + + G ++ + L +A ++RE+ AL SY + A+ L LP Sbjct: 241 AASVRLREILATGALTDDVLHAEALGLLRESAALKRARETVRSYAEDARAQLAPLPQIPA 300 Query: 307 KKSLMEVVDFCLQRLN 322 +++L + D R + Sbjct: 301 RRALESLCDHIADRTS 316 >gi|138895788|ref|YP_001126241.1| heptaprenyl diphosphate synthase subunit II [Geobacillus thermodenitrificans NG80-2] gi|196248670|ref|ZP_03147370.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. G11MC16] gi|134267301|gb|ABO67496.1| Component II of heptaprenyl diphosphate synthase [Geobacillus thermodenitrificans NG80-2] gi|196211546|gb|EDY06305.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. G11MC16] Length = 320 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 76/243 (31%), Positives = 132/243 (54%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + KD+ V + + + S+ + + +L+ +GGKR+RP+ L A Y Sbjct: 3 LKAMYSFLSKDLAAVEQELERTVQSEYGPLGEAALHLLQAGGKRIRPVFVLLAARFGHYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD+L +++ Sbjct: 63 LERIKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLER 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E A + L+ + GE+ Q+ + YL I+ KTA+L +A+ ++ Sbjct: 123 MAELDDPRAHQVLAKTIVEVCRGEIEQIKDKYWFEQPLRTYLRRIRRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L AG SV + L +G +G++FQ+ DD+LD+ G ++GK G D G TLPV+ Sbjct: 183 ALAAGAPESVAKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNITLPVLY 242 Query: 241 AFQ 243 A + Sbjct: 243 ALR 245 >gi|332829987|gb|EGK02615.1| hypothetical protein HMPREF9455_00865 [Dysgonomonas gadei ATCC BAA-286] Length = 326 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 3/214 (1%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D + Y++ GGKR+RP L L + + + + + +A AIE H TLLHDD++D + +R Sbjct: 33 DPITYILSLGGKRVRPALALMSYNLYKEDVERVIPIALAIEVFHNFTLLHDDLMDRADMR 92 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQL 148 RGK + W + T+VL GD +L +A+ + +T S++ L L + T E G+ + Sbjct: 93 RGKPTVHIRWNDNTAVLSGDAMLIEAYKEIAKTDSEQLPRVLDLFSETATEICCGQQYDM 152 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + LDVT +YL +I+ KTAVL AL+ +++AG ++ L +G+N+G+ FQL Sbjct: 153 EFEQRLDVTIPEYLEMIRLKTAVLLGCALKEGAIVAGAPDADADNLYEFGINVGLGFQLK 212 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 DD+LD G+ GK IG D K T +I A Sbjct: 213 DDLLDVYGDSESFGKKIGGDILCNKKTFLLITAL 246 >gi|254526364|ref|ZP_05138416.1| solanesyl diphosphate synthase [Prochlorococcus marinus str. MIT 9202] gi|221537788|gb|EEE40241.1| solanesyl diphosphate synthase [Prochlorococcus marinus str. MIT 9202] Length = 323 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 167/293 (56%), Gaps = 14/293 (4%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKRLRP +L ++ A+ E+ H LA E IHTA+L+HDDVVD++A R Sbjct: 38 EHLFSAGGKRLRPGIVLLISKAISPEFCLTSKHKRLAEITEMIHTASLVHDDVVDEAATR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG + + +VL GDFL +QA + + ++ LS V LAEGE++Q +L+ Sbjct: 98 RGVDTVHSRFNTRVAVLAGDFLFAQASWHLANLDNVNVVKLLSRVIMDLAEGEIKQ-NLN 156 Query: 152 KNLDVTEEDYLHVIKS--KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + D + ++ KS KTA L + + + + +++ + + +L +G N+G+AFQ+VD Sbjct: 157 R-FDSAQSFSKYINKSYCKTASLIANSCKAAGVLSEINDENLTSLYEFGKNIGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN-LK 268 D+LD+ G ++GK D +G T PV+ A E+N S + + +++ +N L Sbjct: 216 DILDFTGNDKQLGKPAVSDLASGYLTAPVLYAL------EENKQLSVLINRELAEKNDLD 269 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A I+ ++A+ + A + +K+++ LPDS +K++LM + +F L R+ Sbjct: 270 DALNIIMNSKAIDSSRKLAEDFAMLSKEAIVWLPDSEYKRALMALPEFVLSRI 322 >gi|300770135|ref|ZP_07080014.1| possible trans-hexaprenyltranstransferase [Sphingobacterium spiritivorum ATCC 33861] gi|300762611|gb|EFK59428.1| possible trans-hexaprenyltranstransferase [Sphingobacterium spiritivorum ATCC 33861] Length = 323 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 89/300 (29%), Positives = 156/300 (52%), Gaps = 10/300 (3%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S V ++ + Y++ GK++RPM +A + ++ A +E +HTA+L+HDDV Sbjct: 28 SSVPLLDRITHYIVKRKGKQMRPMFVFFSAGLCGSINESTFRGASLVELLHTASLVHDDV 87 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VD++ RRG + +W N+ +VLVGDFLLS+ + ++ L+ +S ++EGE Sbjct: 88 VDNANERRGFFSVNALWKNKVAVLVGDFLLSKGLLLSVDNNDFHLLKIVSEAVEQMSEGE 147 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ ++ LD+ E Y VI+ KTA L ++ + V + + ++G +GIA Sbjct: 148 LLQIEKARKLDIEESVYFEVIRQKTASLIASCCACGAASTDVDEETVKKMHAFGEKVGIA 207 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDG 260 FQ+ + ++++GK +G D + K TLP+I A + K EK N K+ D Sbjct: 208 FQI--KDDLFDFGLDDVGKPLGNDIKEKKMTLPLIYALSQTDKSEKRRIINLVKNHNEDN 265 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 K E + AF+ R + L + + Y Q+A + L P+ ++ L ++V + +R Sbjct: 266 KKVAEVI--AFV--RSSGGLDYATEKMFQYQQEAFEILNSFPEGIYRTGLEQLVRYTTER 321 >gi|318041258|ref|ZP_07973214.1| solanesyl diphosphate synthase [Synechococcus sp. CB0101] Length = 323 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 150/292 (51%), Gaps = 8/292 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + L G+ H LA E IHTA+L+HDDVVD+++ Sbjct: 36 AAEHLFSAGGKRLRPGIVLLVSRALAADGELTARHRRLAEITEMIHTASLVHDDVVDEAS 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + ++ +VL GDFL +QA + E ++ LS V LA+GE++Q Sbjct: 96 TRRGVDTVHSRFNHRVAVLAGDFLFAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E YL KTA L + + + +++G+ L +G LG+AFQ+VD Sbjct: 156 FRYDTGQSFETYLEKSYCKTASLIANSARAAGVLSGLPAHQLDELYRFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D G T P + A + + DG +L + Sbjct: 216 DILDFTGSDQQLGKPAASDLATGYLTAPALYALEEHPALAGLIEREFSEDG-----DLDQ 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++R ++A+ + A + +A++++ LP S + +L+ + +F L RL Sbjct: 271 ALELVRNSQAIQRSRALAEGFANEAREAISWLPASDCRSALLALPEFVLSRL 322 >gi|228470958|ref|ZP_04055803.1| octaprenyl-diphosphate synthase [Porphyromonas uenonis 60-3] gi|228307355|gb|EEK16369.1| octaprenyl-diphosphate synthase [Porphyromonas uenonis 60-3] Length = 318 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 162/314 (51%), Gaps = 7/314 (2%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +K+ E+V + + SD ++ +++L S GK +RP++ A + + + L A Sbjct: 8 IKEFEQV---FKRSLQSDASVLSHALEHLQHSSGKHVRPIIVGLCAQLCAGQTNERTLAA 64 Query: 69 C-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-S 126 IE +HTA+L+HDDV+D S RRG+ ++ N +VL+GD++LS AF ++ + + Sbjct: 65 ALVIELLHTASLIHDDVIDWSDTRRGQPTLNALYSNHQAVLMGDYVLSTAFLEIVSREHN 124 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 QE L ++ L+ GEL QLSLSK EEDY V+ KT LF A+ ++ +L Sbjct: 125 QEMLRVVAQAGRNLSIGELMQLSLSKAHTYREEDYYAVVDRKTGTLFEASAKLGALSVNA 184 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + G +G AFQL DD+ DY ++ ++GK G D GK +LP++ T Sbjct: 185 TDEEVERCARLGQLMGRAFQLQDDLFDY-DKLQDVGKPTGHDLIEGKVSLPLLYVLNHAT 243 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E++ S + I +++ I RE + TE + ++A D LR S+ Sbjct: 244 PTERDEIISYLQQ-PIEADSIDYLLRIARERGGIDYTERQIQQILREAIDLLRSFAPSAT 302 Query: 307 KKSLMEVVDFCLQR 320 +++L + +R Sbjct: 303 RETLERFITLLGER 316 >gi|169631007|ref|YP_001704656.1| polyprenyl-diphosphate synthase GrcC1 [Mycobacterium abscessus ATCC 19977] gi|169242974|emb|CAM64002.1| Probable polyprenyl-diphosphate synthase GrcC1 [Mycobacterium abscessus] Length = 328 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 95/314 (30%), Positives = 161/314 (51%), Gaps = 11/314 (3%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + + LI+ + ++ + V +L +GGKR RP+ T+ A ++ V+LA A+ Sbjct: 19 LAAIETLIVSELGQSDPLLTESVLHLFHAGGKRFRPLFTVLAAQTGPDPDNDEVILAGAV 78 Query: 72 -EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 E IH ATL HDDV+D++ RRG +A WGN ++L GD+LL+ A +V S+ Sbjct: 79 CELIHLATLYHDDVMDEAQKRRGVPSANARWGNNVAILAGDYLLATASRLV----SRLGP 134 Query: 131 EALSLVACTLAE---GELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A+ +VA T AE G++R+ + + + D TE YL VI KT L +AA ++ + Sbjct: 135 TAVRIVAETFAELVTGQMRETVGVPEGGDETEH-YLKVIHEKTGSLIAAAGRFGAMTSRC 193 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + L G +G AFQ+ DD++D +E GK G D R G TLP++ A R T Sbjct: 194 DDDQIERLSRLGAIVGTAFQISDDIIDIESLTDESGKTPGTDLREGVHTLPMLYAL-RDT 252 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + + + +++A ++R + L + Y +AK L LP Sbjct: 253 GPDADRLRVLLAAPITDDAEVEEALALLRASEGLAQAKSVVIDYADRAKAELVELPPGDA 312 Query: 307 KKSLMEVVDFCLQR 320 + +L ++++ ++R Sbjct: 313 RDALGVLIEYTVRR 326 >gi|329957776|ref|ZP_08298251.1| polyprenyl synthetase [Bacteroides clarus YIT 12056] gi|328522653|gb|EGF49762.1| polyprenyl synthetase [Bacteroides clarus YIT 12056] Length = 324 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 85/244 (34%), Positives = 131/244 (53%), Gaps = 8/244 (3%) Query: 12 MEKVNFLILK-RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +EK+N I R + + D + Y++ GGKR+RP+L L + + + A Sbjct: 8 LEKINSHIADLRFVRSPKGLYDPITYVLSMGGKRIRPVLMLMAYNLYKENVEPAFSSATG 67 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETK 125 IE H TLLHDD++D + RRGK VW + ++L GD +L A+ C V K Sbjct: 68 IEVYHNYTLLHDDLMDRADKRRGKETVHKVWNDNAAILSGDAMLVLAYQFMAQCPVKHLK 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 E ++ SL A + EG+ + + DV EE+YL +I+ KT+VL +A+L++ +L+ G Sbjct: 128 --EVMDLFSLTAFEICEGQQMDMEFEQRNDVKEEEYLEMIRLKTSVLLAASLKIGALLGG 185 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 L +GMN+G+AFQL DD+LD G+ GKNIG D K T +I A + Sbjct: 186 ASADDAARLYDFGMNMGVAFQLKDDLLDVYGDAAVFGKNIGGDILCNKKTYMLIKALEHA 245 Query: 246 TKRE 249 ++ + Sbjct: 246 SQEQ 249 >gi|163841369|ref|YP_001625774.1| farnesyl pyrophosphate synthetase [Renibacterium salmoninarum ATCC 33209] gi|162954845|gb|ABY24360.1| farnesyl pyrophosphate synthetase [Renibacterium salmoninarum ATCC 33209] Length = 375 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 146/292 (50%), Gaps = 11/292 (3%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 ++LI +GGKR+RP+L L A + + + A +E H ATL HDDV+D + RRG Sbjct: 88 RHLIEAGGKRIRPLLVLLAAHLGDSSRPEVIRAAVVVELTHLATLYHDDVMDSAPFRRGA 147 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLS 151 A VWGN ++L GD + ++A +V E + AL + A T L G+L + Sbjct: 148 PTAHEVWGNSVAILTGDLIFARASILVSELGPR----ALGIQARTFERLCLGQLHETVGP 203 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + + + Y+ V+ KT L SA+ ++ ++ A V ++ L YG +G+AFQL DDV Sbjct: 204 RPDEDPVDHYISVVSDKTGSLVSASGQLGAIFAEVPEPIQDVLVEYGEKVGVAFQLADDV 263 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV-ENLKKA 270 +D G GK G D R PTLPV+L + + + DG +S E L A Sbjct: 264 IDVTGLKQVSGKAPGTDLRERVPTLPVLLLRKAASTDPSAAAVLELVDGDLSSDEALAAA 323 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +RE+ ++ A + +A +L LP+ K +L +F L +N Sbjct: 324 VTALREHPVTEESWVVARRWADEAVAALAPLPEGVVKSAL---ANFALAVVN 372 >gi|25011822|ref|NP_736217.1| polyprenyl synthetase family protein [Streptococcus agalactiae NEM316] gi|77413688|ref|ZP_00789872.1| polyprenyl synthetase family protein [Streptococcus agalactiae 515] gi|24413363|emb|CAD47442.1| Unknown [Streptococcus agalactiae NEM316] gi|77160288|gb|EAO71415.1| polyprenyl synthetase family protein [Streptococcus agalactiae 515] Length = 326 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 92/316 (29%), Positives = 163/316 (51%), Gaps = 9/316 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVL-- 66 K++++ N LI +RI + I + L +GGK+LRP L + L + D L Sbjct: 13 KNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGNKENQDTQQLKK 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A ++E +H ATL+HDDV+DDS LRRG + + +G +V GD L + F +++E+ + Sbjct: 73 IAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTGDLLFTVFFDLILESMA 132 Query: 127 QEALEALSLVAC-TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++ + + GEL Q+ L N YL I KTA LF A + + G Sbjct: 133 DTPFMRINAKSMRKILMGELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGG 192 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + V + G N+G+ FQ++DD+LDY + K + ED G +LP++LA + Sbjct: 193 AEKEVVRLAGHIGFNIGMTFQILDDILDYTADKKTFNKPVLEDLTQGVYSLPLLLAIEEN 252 Query: 246 TKREKNFWKSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + +K ++ ++ E+++K ++ +R + + A + +KA + LP + Sbjct: 253 P----DIFKPILDKKTDMATEDMEKIAYLVVSHRGVDKARHLARKFTEKAISDINKLPQN 308 Query: 305 SWKKSLMEVVDFCLQR 320 S KK L+++ ++ L+R Sbjct: 309 SAKKQLLQLTNYLLKR 324 >gi|332291452|ref|YP_004430061.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5] gi|332169538|gb|AEE18793.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 324 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/287 (32%), Positives = 150/287 (52%), Gaps = 10/287 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D + Y++ GGKRLRP+LTL + E + A AIE H +L+HDD++DD+ LR Sbjct: 29 DPINYILGLGGKRLRPVLTLMACELFEKDHAIALDAALAIEIFHNFSLVHDDIMDDAPLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQL 148 RGK W T +L GD +L +A+ + + +E + S A + EG+ + Sbjct: 89 RGKETVHEKWDINTGILSGDAMLIRAYQLFENYEGDTFKELAKLFSKTAIEVCEGQQYDV 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVT +Y+ +I+ KTAVL AAL++ +++AG + ++A+ +YG +LG+AFQL Sbjct: 149 DFETRDDVTIPEYMKMIEYKTAVLVGAALKMGAIVAGASKTCQEAIYNYGRDLGLAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE----KNFWKSTINDGKISV 264 DD LD G+ GK +G D K T + A K + ++F+ + D + Sbjct: 209 DDYLDAFGDPESFGKQVGGDIIENKKTFLYLTALINSDKDDAQQLEHFFSISPADPAEKI 268 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 E +K+ F+ ++ A TE Y QKA +L + S KK ++ Sbjct: 269 ETVKQQFL---DSGAAKATEQEIAKYTQKAFTALDNVDISEDKKEVL 312 >gi|313891223|ref|ZP_07824842.1| polyprenyl synthetase [Streptococcus pseudoporcinus SPIN 20026] gi|313120586|gb|EFR43706.1| polyprenyl synthetase [Streptococcus pseudoporcinus SPIN 20026] Length = 326 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 156/308 (50%), Gaps = 9/308 (2%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVL--LACAIEFI 74 LI KR+ + I + + L +GGK LRP L T+ + ++ L +A ++E + Sbjct: 21 LIEKRVQARNTDIQEAIVQLAQAGGKYLRPAFFFLFTSFGQREKQNSEQLTKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 H ATL+HDDV+DDS LRRG+V + +G +V GDFL + F +++ET ++ Sbjct: 81 HMATLIHDDVIDDSPLRRGQVTIQTQFGKDIAVYTGDFLFTIFFELILETMQDSPYMKVN 140 Query: 135 LVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 A + GEL Q+ L N + DYL I KTA LF A + G V Sbjct: 141 AKAMKKILVGELDQMHLYFNQKQSIRDYLRSISGKTAELFRLASSEGAYFGGASPEVVSK 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 G ++G+ FQ++DD+LDY + + K I ED NG +LP++ A K + + Sbjct: 201 AGRIGYHIGMTFQILDDILDYTAKEKDFNKPILEDITNGVYSLPLLFAI----KHNPDAF 256 Query: 254 KSTIN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 K ++ +++ L+K ++ EN + + A Y QKA D + LP +K L++ Sbjct: 257 KELLDKKDQLTAAELRKIAELVLENGGVEKAQKLARQYTQKAIDDINELPKIKAQKQLLQ 316 Query: 313 VVDFCLQR 320 + + L+R Sbjct: 317 LTNHLLKR 324 >gi|256425937|ref|YP_003126590.1| trans-hexaprenyltranstransferase [Chitinophaga pinensis DSM 2588] gi|256040845|gb|ACU64389.1| Trans-hexaprenyltranstransferase [Chitinophaga pinensis DSM 2588] Length = 321 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 83/299 (27%), Positives = 157/299 (52%), Gaps = 3/299 (1%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLH 81 + S V ++ ++ Y++ GK++RPM L +A + A A +E +HTATL+H Sbjct: 23 VKSHVPLLDRIMHYIVKRKGKQIRPMFVLLSAKLFNNNIQESTYRAAALVELLHTATLVH 82 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DDVVDD+ RRG + +W N+ +VLVGD+LLS+ + ++ +L+ LS ++ Sbjct: 83 DDVVDDANERRGFFSINALWKNKIAVLVGDYLLSKGLLLSVDNNEFRSLKILSEAVKEMS 142 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 EGEL Q+ ++ L++ E+ Y +I+ KTA L ++A + + + ++ +G + Sbjct: 143 EGELLQIEKTRKLNIKEDIYFEIIRRKTASLLASACAAGAWSTTNDDETTEKMRLFGEKV 202 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G+AFQ+ DD+ DY +++GK G D R K TLP+I + T + + + + Sbjct: 203 GVAFQIKDDLFDYGS--DKIGKPTGIDIREKKMTLPLIYTLEHATPDIRRRIINIVKNHN 260 Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + + +++++ + T+ + + Y +A L P + + L +V + R Sbjct: 261 TDKDKVAEVIDLVKKSGGIEYTQEKMFQYRDEALAVLHSFPANDIRAGLETLVRYTTDR 319 >gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB] gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB] Length = 296 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 83/225 (36%), Positives = 124/225 (55%), Gaps = 14/225 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +Y +F+GGKRLRP+L LA A + + + ACA+E IHT +L+HDD+ +D+ Sbjct: 36 EAARYSLFAGGKRLRPILCLAAAEVAGGSREAAMPAACALEMIHTYSLIHDDLPAMDNDD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE------- 142 RRGK V+G +VL GD LL++AF V + + V TL Sbjct: 96 FRRGKPTNHKVFGEAIAVLAGDALLTEAFDFVSKMDGDIPPRKILAVVATLVRASGYRGM 155 Query: 143 --GELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G++ L ++ +D+ +Y+H+ KT L SA+LEV +L+ G ++ +LK YG Sbjct: 156 IGGQVIDLECENRTVDLATVEYMHI--HKTGALLSASLEVGALLGGGSDAQVSSLKRYGH 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +LG+AFQ+ DD+LD G+ EMGK G D K T P +L R Sbjct: 214 HLGLAFQITDDLLDVEGDAREMGKKPGSDAAKNKKTYPALLGITR 258 >gi|257069301|ref|YP_003155556.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM 4810] gi|256560119|gb|ACU85966.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM 4810] Length = 335 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 156/313 (49%), Gaps = 9/313 (2%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYR 60 EDL + +E++ I R+ + V D+V+ +L+ +GGKR+RPML L A + + Sbjct: 13 EDLATRIVERLGT-IEDRLRASVSTSDDMVRWTGRHLMDAGGKRVRPMLVLLAASLGDID 71 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D A +E H A+L HDDV+D + RRG +A +WGN ++L GDFL ++A + Sbjct: 72 ADGVQDAAVLVELTHLASLYHDDVMDSAPTRRGTDSAHALWGNNVAILTGDFLFARASGL 131 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +A+ S L G+L + K D Y+ V+ KTA L + A + Sbjct: 132 SARIGT-DAVREHSETFERLCLGQLHETVGPKPGDDPFAHYISVLSDKTASLLALAGSLG 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + ++G ++ YG +G+AFQL DDVLD + GK G D R G PT+P +L Sbjct: 191 ASLSGAPQGSADVMRRYGEKVGVAFQLADDVLDLESDAATSGKTPGIDLREGVPTMPTLL 250 Query: 241 AFQRGTKREKNFWKSTIN--DGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 +R + + DG +S L + ++RE+ AL +T A ++A + Sbjct: 251 VRRRAQDHPDSHSLDIVERLDGDLSSSAALDELVDLLREDPALEETRGLASRTAEEAMEI 310 Query: 298 LRCLPDSSWKKSL 310 L LP + + +L Sbjct: 311 LSELPAGAARDAL 323 >gi|319903089|ref|YP_004162817.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108] gi|319418120|gb|ADV45231.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108] Length = 324 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 91/285 (31%), Positives = 148/285 (51%), Gaps = 4/285 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V Y++ GGKR+RP+L L + + + A IE H TLLHDD++D + RRG Sbjct: 31 VSYVLSMGGKRIRPVLMLMSYNLYKEDIVRAYGPAIGIEVYHNYTLLHDDLMDCADRRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQLSL 150 K VW + T++L GD +L A+ + + + +E ++ SL A + EG+ + Sbjct: 91 KKTVHKVWNDNTAILSGDAMLVLAYQYMAQCPAGYLKEVMDLFSLTALEICEGQQMDMEF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DV E +YL +I+ KT+VL +A+L++ +L+ G + L ++GMNLGIAFQL DD Sbjct: 151 ELRKDVKEGEYLEMIRLKTSVLLAASLKIGALLGGASAEDAEHLYNFGMNLGIAFQLKDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 +LD G+ GKNIG D K T +I AF+ R+ K ++ G A Sbjct: 211 LLDVYGDAAIFGKNIGGDILCNKKTYMLIKAFEHADDRQLQQLKVWVDAGSFEPAEKIAA 270 Query: 271 FIIMRENRALVDT-EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 + + + E + Y ++A ++L + + KK +E++ Sbjct: 271 VTDLYNQIGIKEICEKKMAEYSERAMENLVAVKVADEKKKELEIL 315 >gi|227549792|ref|ZP_03979841.1| possible trans-hexaprenyltranstransferase [Corynebacterium lipophiloflavum DSM 44291] gi|227078047|gb|EEI16010.1| possible trans-hexaprenyltranstransferase [Corynebacterium lipophiloflavum DSM 44291] Length = 338 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/312 (30%), Positives = 159/312 (50%), Gaps = 4/312 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACA 70 +EK L+++R+ + + I D V +L +GGKR RP++ L + + G DN V A Sbjct: 30 LEKSEKLLMERLSTGEDFIVDKVTHLALAGGKRFRPLVALLCSEFGPHPGSDNAVKGAVI 89 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 E +H ATL HDDV+D++ +RRG +A W N ++L GD L S A M+ E + E + Sbjct: 90 TELVHLATLYHDDVMDEADMRRGVESANARWNNTVAILAGDILFSHASLMMSEIDT-ETV 148 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L G++R+ ++ D + YL VI+ KTAVL ++A + SL AG V Sbjct: 149 RHFADTFGQLVTGQMRESVGARGGDPVQH-YLTVIREKTAVLIASAAHLGSLHAGASADV 207 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++ G +G+ FQ+VDD++D + + GK G D R G TLPV+ A + + + Sbjct: 208 VTRCETIGEAIGMIFQIVDDIIDIFSDSEQSGKTPGTDLREGVFTLPVLYALEDPSPAGE 267 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + E++ A ++ + +A T Y + L LPD + ++L Sbjct: 268 RL-RGMLTGPLERDEDVAYAIELIGQTQARQKTLDTVRHYLSIVDEQLAELPDIAANRAL 326 Query: 311 MEVVDFCLQRLN 322 ++ ++R+ Sbjct: 327 RDLSQSTVERVG 338 >gi|116203433|ref|XP_001227527.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88175728|gb|EAQ83196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 452 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 105/297 (35%), Positives = 146/297 (49%), Gaps = 18/297 (6%) Query: 31 PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 P ++ S G P+L A L + R LA E IHTA+LLHDDV+D S Sbjct: 165 PSILSDFNPSAGTESEPVLADAGILPSQRR------LAEITELIHTASLLHDDVIDHSVS 218 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG +A L +GN+ +VL GDFLL +A + + E +E L+ V L EGE QL Sbjct: 219 RRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVIELLATVIANLVEGEFMQLKN 278 Query: 151 SKNLDVTE---ED----YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + ED YL KTA L S + ++L+ G A SYG NLG+ Sbjct: 279 TARDETNPQWSEDALTYYLQKTYLKTASLISKSCRAAALLGGADAQTVDAAYSYGRNLGL 338 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQLVDD+LDY E+GK G D G T P++ A++ + + NDG ++ Sbjct: 339 AFQLVDDLLDYTRSEKELGKPAGADLELGLATAPLLFAWKTMPELGALVGRKFANDGDVA 398 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +A ++ ++ + T A Y +KA SL PDS K L+E+ LQR Sbjct: 399 -----RARDLVMQSDGIQQTRTLAEDYAEKAIASLSLFPDSEAKDGLVEMAVKTLQR 450 >gi|134046661|ref|YP_001098146.1| dimethylallyltranstransferase [Methanococcus maripaludis C5] gi|132664286|gb|ABO35932.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Methanococcus maripaludis C5] Length = 317 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 88/294 (29%), Positives = 157/294 (53%), Gaps = 12/294 (4%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA--IEFIHTATLLHDDVVDDSALRR 92 K+L+ +GGKR+RP L++ T L+ + D +LA A +E IH TL+HDD++D+ RR Sbjct: 30 KHLLLAGGKRVRPYLSIITYLL--KKDDITEILAPALSVELIHNYTLVHDDIMDNDDQRR 87 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMV--IE--TKSQEALEALSLVACTLAEGELRQL 148 G ++G ++L GD L ++AF + IE K+ E L+ LS + EG+ + Sbjct: 88 GMPTVHTIYGEPIAILAGDLLYAKAFEALSNIEDSKKAHEVLKVLSKACVEVCEGQTDDM 147 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + +E Y +I KT L A +E+ +++A R+AL +Y +G+ FQ+ Sbjct: 148 EFEERFPTLDE-YFDMISKKTGALIVAPVEIGAVMANCTPEERKALCNYAKRIGMTFQIQ 206 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DDVLD G+ +GK +G D GK T+ VI A + ++ +K + + + + + Sbjct: 207 DDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIYAMENLSEDKKERLLQILGNKDATADEVS 266 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +A I+ ++ + + ++AKD L+ D+ +K+L + DF ++R++ Sbjct: 267 EAIAILADSIEYAKNTMKKAT--EEAKDYLKIF-DAEKRKNLESIADFIIERIH 317 >gi|323465974|gb|ADX69661.1| Trans-hexaprenyltranstransferase [Lactobacillus helveticus H10] Length = 326 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 9/314 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++ +V+ LI I + + + + + +G K LRP L L A ++ + LA + Sbjct: 16 ELAEVDTLIQHTIQTPHQSLQAALLTMADNGDKYLRPSLLLLAAHVVGKVNQQTINLASS 75 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H ATL+HDD +DDS LRRG ++ + +G +V GD L + F ++++T ++ Sbjct: 76 IEILHMATLIHDDTIDDSDLRRGNISIQAEFGKDVAVYAGDLLFTNFFDLMLDTTTEH-- 133 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 E L A T++ GEL Q++ NL+ T DYL+ IK KTA LF A E + AG Sbjct: 134 EYLVRNAQTMSHILNGELGQMAERFNLEQTFTDYLNDIKGKTAALFRLAAEEGAHFAGGN 193 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 AL ++G NLGIAFQ+VDD+LDY G ++ K ED G +LP++LA + Sbjct: 194 AEQSTALANFGENLGIAFQIVDDLLDYTGSA-KLNKPTLEDLATGVYSLPLLLALDQPEL 252 Query: 248 REKNFWKSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + K +N + +SV +++ I+ + + + A Y QKA D L ++S Sbjct: 253 KTK--LLPILNKKRQMSVSDMQLIQEILVNSAVIEKSRKLAQEYAQKAVDCLDIFQNNSA 310 Query: 307 KKSLMEVVDFCLQR 320 L ++ L+R Sbjct: 311 ATLLKKMPQQLLKR 324 >gi|116070412|ref|ZP_01467681.1| Trans-hexaprenyltranstransferase [Synechococcus sp. BL107] gi|116065817|gb|EAU71574.1| Trans-hexaprenyltranstransferase [Synechococcus sp. BL107] Length = 323 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 92/293 (31%), Positives = 154/293 (52%), Gaps = 10/293 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKR+RP + L + L G+ H LA E IHTA+L+HDDVVD+++ Sbjct: 36 AAEHLFSAGGKRIRPGIVLLISRALAADGELTQRHRRLAEITEMIHTASLVHDDVVDEAS 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + + +VL GDFL +QA + + ++ LS V LA+GE++Q Sbjct: 96 TRRGVDTVHSRFDARVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E Y KTA L + + + +++ +L +G LG+AFQ+VD Sbjct: 156 YRFDTSQSFETYFEKSYCKTASLIANSSRAAGVLSECNPQQLDSLYQFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS-VENLK 268 D+LD+ G ++GK D G T P A E+N T+ D + S +L+ Sbjct: 216 DILDFTGSDQQLGKPAASDLATGYLTAPTFYAL------EENPELGTLIDREFSEAGDLE 269 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +A ++R ++A+ T A + +++++S+ + DS K++L+E+ DF L RL Sbjct: 270 QALELVRSSQAIPRTRELAEKFARESRESIAWMADSPSKRALLELPDFVLSRL 322 >gi|254421801|ref|ZP_05035519.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7335] gi|196189290|gb|EDX84254.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7335] Length = 323 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 91/290 (31%), Positives = 160/290 (55%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEY-RG--DNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP + L A + +G H LA E IHTA+L+HDDVVD+S+ R Sbjct: 38 EHLFGAGGKRIRPAIVLLLARATQPDQGITGRHRRLAEITEMIHTASLVHDDVVDESSTR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG +GN+ +VL GDFL +Q+ + + E ++ LS V LAEGE+RQ Sbjct: 98 RGVDTVHSRFGNKVAVLAGDFLFAQSSWYLANLDNLEVVKLLSRVIMDLAEGEIRQGLKH 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +T + YL KTA L + + + +++ V + + + L +G +LG+A+Q+VDD+ Sbjct: 158 FDTTLTIDAYLEKSYYKTATLIANSAKAVGVLSEVSDHMAENLYQFGRSLGLAYQVVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ + +GK G D +G T P + A + E + K+ I E+ ++A Sbjct: 218 LDFTSSDDVLGKPAGSDLLSGNLTAPALYALE-----EVPYLKTLIERQFSEPEDFEQAI 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++ ++ + + A ++ + A + L LP S+ +++L ++ ++ L+RL Sbjct: 273 ELVNNSQGIERSRVLAKTHVRHAVECLSNLPPSASRQALEDISEYVLRRL 322 >gi|11465734|ref|NP_053878.1| prenyl transferase [Porphyra purpurea] gi|1709766|sp|P51268|PREA_PORPU RecName: Full=Prenyl transferase gi|1276734|gb|AAC08154.1| prenyl transferase [Porphyra purpurea] Length = 323 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 89/291 (30%), Positives = 155/291 (53%), Gaps = 8/291 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALR 91 K+L +GGKRLRP + L A + + LA E IHTA+L+HDDV+D+ + R Sbjct: 38 KHLFEAGGKRLRPAIVLLVAKSTSEQQEIKPGQRRLAEITEIIHTASLVHDDVIDECSTR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG+ ++ + +VL GDFL +Q+ + + E ++ ++ V AEGE+RQ + Sbjct: 98 RGEKTVHKLFNTKIAVLAGDFLFAQSSWYLANIGNLEVVKVITKVITDFAEGEIRQGLVH 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + ++ +DY+ KTA L +A+ ++++ + + + L YG ++G+AFQ++DDV Sbjct: 158 FDPSISIDDYIEKSFYKTASLVAASCRGAAMLNDLNSQMHNDLYLYGKHMGLAFQIMDDV 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD G +GK G DF NG T P++ A + K ++ + ++ IS+ A Sbjct: 218 LDIAGSTKSLGKPSGADFMNGNLTAPILFALTQEGKLDQLIQREFSDERDISL-----AL 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +++++ + + A Q A L+ LP S+ SL E+ F + RL+ Sbjct: 273 FLIKKSGGITKAKDLAKEQVQAALCCLQFLPKSAPVSSLKELTHFIITRLS 323 >gi|124485508|ref|YP_001030124.1| GCN5-related N-acetyltransferase [Methanocorpusculum labreanum Z] gi|124363049|gb|ABN06857.1| Polyprenyl synthetase [Methanocorpusculum labreanum Z] Length = 322 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/320 (31%), Positives = 160/320 (50%), Gaps = 25/320 (7%) Query: 20 LKRICSDVEMIPD------------VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 LK + + V+M D +L+ SGGKRLRP L L +A + + Sbjct: 7 LKSVAAKVDMEADEYSKAVDSTLQKAASHLLVSGGKRLRPALVLLSAESIRKGASEDIFQ 66 Query: 68 AC-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIE 123 A A+E+ HT TL+HDD++D +LRRG+ +VW T++L GD L + AF C V Sbjct: 67 AALALEWTHTFTLVHDDIMDGDSLRRGRPTVHVVWNEATAILAGDVLYANAFEYLCRVKN 126 Query: 124 TKSQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + A+ ++A + L EG+ +S DVT E+YL +++ KT VL++AA + Sbjct: 127 ATAESKVIAVQMLAHSCHELCEGQQEDVSFETRSDVTLEEYLSMVRKKTGVLYAAAAGIG 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + +AG AL + G+N GIAFQ+ DD++D GK+ D R K ++ IL Sbjct: 187 AALAGGDVKQISALYTLGLNTGIAFQIQDDIIDLLAPSEVSGKDQASDLRENKQSILAIL 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A R+ S + ++S E + +A ++ + L A +K L Sbjct: 247 A------RDGGIDLSAYHKPELSKEEISEAISLLETSGVLDKARGMAEKLINDSKAGLSV 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS K ++E+ DF + R Sbjct: 301 LPDSEAKTLILEMADFFVAR 320 >gi|305662643|ref|YP_003858931.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230] gi|304377212|gb|ADM27051.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230] Length = 346 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/263 (31%), Positives = 144/263 (54%), Gaps = 8/263 (3%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGKRLRP++ + A ++ D + A ++E +HT TL+HDD++D LRRG Sbjct: 54 AGGKRLRPLIVVLGARIVGGDEDIAIPGAASVEVLHTFTLVHDDIIDKDELRRGVPTVHK 113 Query: 100 VWGNQTSVLVGDFLLSQAF-CM-------VIETKSQEALEALSLVACTLAEGELRQLSLS 151 +WG+ +++ GD L + ++ C+ V + +A++ L+ A T+AEG+ + L Sbjct: 114 IWGSDMAIVAGDLLYAYSYRCLLRALERGVPVERVNKAIDILTDAAITVAEGQALDMLLP 173 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 +V+ DY+ ++K KTA LF++++ + + +AG + LK +N GIAFQ+ DD+ Sbjct: 174 SMQNVSINDYIEMVKKKTAALFASSIAIGATLAGGDEKLTAILKESMINAGIAFQIRDDI 233 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 L G+ +GK I D R GK TL VI A+ + + K + + ++E+L+ Sbjct: 234 LGLIGDEKTLGKPIYSDLREGKMTLLVIYAYSKIDDESRARMKRVLGNRNATLEDLQDVA 293 Query: 272 IIMRENRALVDTEYRAYSYGQKA 294 I+R + A+ + A Y KA Sbjct: 294 NIIRNSGAIEYADSLAEEYALKA 316 >gi|121704736|ref|XP_001270631.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus clavatus NRRL 1] gi|119398777|gb|EAW09205.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus clavatus NRRL 1] Length = 451 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 17/288 (5%) Query: 45 LRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 L P+++ + ++ GD ++L LA E IHTA+LLHDDV+D++ RR +A L Sbjct: 167 LSPLVSKSAEAQYDFAGDENILPTQRRLAEITELIHTASLLHDDVIDNAVTRRSSNSANL 226 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLD 155 +GN+ +VL GDFLL +A + + E E L+ V L EGE QL + KN Sbjct: 227 QFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANLVEGEFMQLKNTAADEKNPV 286 Query: 156 VTEED---YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 T+E YL KTA L S + ++L+ G V A +YG NLG+AFQLVDD+L Sbjct: 287 FTDETISYYLQKTYLKTASLISKSCRAAALLGGSTPEVVDAAYAYGRNLGLAFQLVDDLL 346 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY E+GK G D G T P++ A+++ + + +G + + A Sbjct: 347 DYTVSGVELGKPAGADLELGLATAPLLFAWKQNPELGPLVGRKFSREGDVQM-----ARE 401 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ ++ + T A Y KA ++ PDS K L+++ + + R Sbjct: 402 LVYKSDGVEQTRALAQEYADKAITAVSNFPDSEAKAGLIQMCEKAMNR 449 >gi|218887577|ref|YP_002436898.1| polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758531|gb|ACL09430.1| Polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 331 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 86/260 (33%), Positives = 137/260 (52%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + LAC++E +H+ATLLHDD++D + LRRG AA ++G +VL GD LL+ A + Sbjct: 70 GPDLYPLACSVELLHSATLLHDDILDGADLRRGLPAAHTMFGQTETVLAGDALLALANRI 129 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E ++ A GE+ +++ ++ D + Y+ +I KTA + A+ E+ Sbjct: 130 VARYGDARLTETIAEAIVQTATGEIVEIAHQRSTDHGHDTYIDIITGKTAWMLRASCELG 189 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L A + QA +G+NLGIAFQ+VDD LD+ + GK +G D R GK T P+I Sbjct: 190 ALAAQAPDEAVQAAAGFGLNLGIAFQIVDDALDFAASSKDTGKPVGGDLREGKLTPPLIY 249 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + T +E++ + + G + + +R T A SY KA L Sbjct: 250 YLETLTPQERDAFVTRFRQGTFDDATVAEVAADLRARGCDAKTRQLAASYLDKASACLDA 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ ++ L + +D+ L R Sbjct: 310 LPDTPERRILRQSIDYVLNR 329 >gi|325286587|ref|YP_004262377.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489] gi|324322041|gb|ADY29506.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489] Length = 324 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/271 (34%), Positives = 141/271 (52%), Gaps = 16/271 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y++ GGKRLRP+L L TA + E + A A+E H +L+HDD++DD+ LRRG Sbjct: 31 INYILQLGGKRLRPILALMTADVFETDFKKAIPAAMAVEVFHNFSLVHDDIMDDAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA----EGELRQLS 149 K W T +L GD +L +A+ + +E E + L+++ T A EG+ + Sbjct: 91 KATVHEKWDINTGILSGDAMLIEAYRL-LEQYDGEQYKKLNVLFSTTALQVCEGQQYDVD 149 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 DVT +YL +I+ KTAVL +AA+++ ++IA + +G NLGIAFQL D Sbjct: 150 FETRDDVTIPEYLKMIEYKTAVLVAAAMKMGAIIAETTVENEDLIYDFGKNLGIAFQLQD 209 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW------KSTINDGKIS 263 D LD G+ GK +G D K T + A + + E+N + T N+ KI+ Sbjct: 210 DYLDAFGDPKTFGKQVGGDIIENKKTYLYLKALELSSNAEQNSLDQLFSIQPTNNNDKIA 269 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 +I E++A V T+ Y QKA Sbjct: 270 TVK-----VIFEESKADVATKQAIEDYTQKA 295 >gi|28493021|ref|NP_787182.1| heptaprenyl diphosphate synthase component II [Tropheryma whipplei str. Twist] gi|28476061|gb|AAO44151.1| probable heptaprenyl diphosphate synthase component II [Tropheryma whipplei str. Twist] Length = 338 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 89/301 (29%), Positives = 158/301 (52%), Gaps = 18/301 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++V +L+ SGGKR RP+L L T+ M D + A IE IH +L HDDV+D++ +R Sbjct: 42 EIVSHLLVSGGKRARPLLVLLTSCMGSGINDAVIRAAAGIELIHLGSLYHDDVMDNAYIR 101 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-LSL 150 G + A +WG ++L GDFL ++A + + + A+ + + G+L + L + Sbjct: 102 HGSITAHRLWGKSAAILAGDFLFAKAGVLGLNLD-KRAIAVQTEAFQRMISGQLSETLGI 160 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 S +LD E Y+ V + KT L +A+ +V +++ S + L+ +G ++G+AFQLVDD Sbjct: 161 SDSLDPLEA-YIEVSRGKTGSLIAASAQVGAILGDASPSTLEPLRDFGESIGVAFQLVDD 219 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN-------FWKSTINDGKIS 263 V+D G + GK G D R G +LP++L K +++ + + G Sbjct: 220 VIDLSG---KSGKTPGSDIRAGVMSLPILL-LSNAAKDDRDSAVLLEEIERVRRHSGACG 275 Query: 264 VEN----LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 ++ + +R++ T A ++G KAK +L+ LP+ + + +L+ V+ + Sbjct: 276 SDDYSSEMNAVLAHLRKHDVTARTLEIARTWGDKAKHALKKLPECAPRDALLAFVETVVS 335 Query: 320 R 320 R Sbjct: 336 R 336 >gi|257866353|ref|ZP_05646006.1| polyprenyl synthetase [Enterococcus casseliflavus EC30] gi|257873131|ref|ZP_05652784.1| polyprenyl synthetase [Enterococcus casseliflavus EC10] gi|257800311|gb|EEV29339.1| polyprenyl synthetase [Enterococcus casseliflavus EC30] gi|257807295|gb|EEV36117.1| polyprenyl synthetase [Enterococcus casseliflavus EC10] Length = 326 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 155/327 (47%), Gaps = 43/327 (13%) Query: 20 LKRICSDVEM--------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH------- 64 LK +CS +E I DV+ +SGGK LRP L A + GD H Sbjct: 15 LKTVCSIIEEHVTVRNKEIQDVLIDFTYSGGKMLRPALFFLFADL----GDPHYKKTDQL 70 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +A ++E +H ATL+HDD++DDS LRR +V + +G +V GD L +Q F ++IE+ Sbjct: 71 TKIAASLEILHMATLIHDDIIDDSPLRRSQVTVQAKYGKDIAVYTGDLLFTQFFELLIES 130 Query: 125 -KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 L+ + L GEL Q+ N+ + +DYL I KTA LF A + Sbjct: 131 MNGSPFLKTNAQAMKRLLLGELDQMHTRYNIHESIDDYLQSINGKTAELFWLACLEGAHF 190 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+ ++ G N+GIAFQ+ DD+LDY + + K I ED G TLP++ A + Sbjct: 191 GGLDTENQERAGEIGRNIGIAFQVFDDILDYTSDSGTLKKPILEDLAQGVYTLPLLFAKE 250 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR----------AYSYGQK 293 + + +N KKA + + E + + D R A +Y QK Sbjct: 251 QAPAA----FAPYLN---------KKAALSLAEAQEVADLVVRYGGVEKARAFAVTYTQK 297 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A D + LP++ K + + + LQR Sbjct: 298 ALDDIDLLPEAPSKAKIRSLTELLLQR 324 >gi|315605114|ref|ZP_07880166.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313221|gb|EFU61286.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 180 str. F0310] Length = 337 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/325 (31%), Positives = 160/325 (49%), Gaps = 8/325 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--RG 61 LE +E V +L+ + S ++ ++ +L +GGKR+RP+LTL A + E R Sbjct: 13 LESRITPGLEVVERRLLEAVSSSRDLTDELTSHLAVAGGKRMRPLLTLVCAQLGESDRRL 72 Query: 62 DNHVLLAC-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D+ VL A A+E H A+L HDDV+D + RRG +A+ +WGN ++L GD L ++A + Sbjct: 73 DDAVLTAATAVELTHLASLYHDDVMDSAPTRRGVPSAQHLWGNNRAILAGDILFARA-SL 131 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + E + + L +G+L + + + YL V+ KT L S A Sbjct: 132 LVASLGPEIVAHHARTFERLCQGQLNETFGPTHGADRVDFYLQVLADKTGSLVSTAASFG 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L++G V + +G +G+AFQ+ DDVLD + GK G D R G TLPV+L Sbjct: 192 ALLSGAGRLVADVVADFGEKVGVAFQIADDVLDLASSGEQSGKTPGTDLREGVDTLPVLL 251 Query: 241 AFQR---GTKREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 +R GT E G +S E L +R + L +T A + A D Sbjct: 252 LRRRQEAGTIDEAGARILRDLAGDLSSDEALAGVVEQLRTHDVLEETRELARRWASDAVD 311 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321 +L LP K +L+ + + RL Sbjct: 312 TLEALPKGEAKTALVAFANLMVDRL 336 >gi|78779003|ref|YP_397115.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9312] gi|78712502|gb|ABB49679.1| Trans-hexaprenyltranstransferase [Prochlorococcus marinus str. MIT 9312] Length = 323 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 174/316 (55%), Gaps = 12/316 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP--MLTLATALMLEYRGDN-HVLL 67 D++ + F + I + ++ ++L +GGKRLRP +L ++ A+ E+ N H L Sbjct: 14 DLDDLIFELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISSEFCLTNKHKRL 73 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A E IHTA+L+HDDVVD+++ RRG + + +VL GDFL +QA + + Sbjct: 74 AEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLANLDNV 133 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS--KTAVLFSAALEVSSLIAG 185 ++ LS V LAEGE++Q +L++ D + ++ KS KTA L + + + + +++ Sbjct: 134 NVVKLLSRVIMDLAEGEIKQ-NLNR-FDSAQSFSKYINKSYCKTASLIANSCKAAGVLSD 191 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + + +L +G N+G+AFQ+VDD+LD+ G ++GK D +G T PV+ A + Sbjct: 192 LSDEKLNSLYDFGKNIGLAFQVVDDILDFTGNDKQLGKPAVSDLASGYLTAPVLYALEEN 251 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 K IN ++L +A I+ ++++ + A + +K+++ LPDS Sbjct: 252 KK-----LSVLINRELAEKDDLDEALNIIMNSKSIESSRKLAEDFAMLSKEAIIWLPDSE 306 Query: 306 WKKSLMEVVDFCLQRL 321 +K++L+ + +F L R+ Sbjct: 307 YKRALLALPEFVLSRI 322 >gi|257875966|ref|ZP_05655619.1| polyprenyl synthetase [Enterococcus casseliflavus EC20] gi|257810132|gb|EEV38952.1| polyprenyl synthetase [Enterococcus casseliflavus EC20] Length = 326 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 155/327 (47%), Gaps = 43/327 (13%) Query: 20 LKRICSDVEM--------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH------- 64 LK +CS +E I DV+ +SGGK LRP L A + GD H Sbjct: 15 LKTVCSIIEEHVTVRNKEIQDVLIDFTYSGGKMLRPALFFLFADL----GDPHYKKTDQL 70 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +A ++E +H ATL+HDD++DDS LRR +V + +G +V GD L +Q F ++IE+ Sbjct: 71 TKIAASLEILHMATLIHDDIIDDSPLRRSQVTVQAKYGKDIAVYTGDLLFTQFFELLIES 130 Query: 125 -KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 L+ + L GEL Q+ N+ + +DYL I KTA LF A + Sbjct: 131 MNGSPFLKTNAQAMKRLLLGELDQMHTRYNIHESIDDYLQSINGKTAELFWLACLEGAHF 190 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+ ++ G N+GIAFQ+ DD+LDY + + K I ED G TLP++ A + Sbjct: 191 GGLDTENQERAGEIGRNIGIAFQVFDDILDYTSDSGTLKKPILEDLAQGVYTLPLLFAKE 250 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR----------AYSYGQK 293 + + +N KKA + + E + + D R A +Y QK Sbjct: 251 QAPAA----FAPYLN---------KKAALSLAEAQEVADLVVRYGGVEKARDFAVTYTQK 297 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A D + LP++ K + + + LQR Sbjct: 298 ALDDIDLLPEAPSKAKIRSLTELLLQR 324 >gi|2829443|sp|P55785|HEPS2_BACST RecName: Full=Heptaprenyl diphosphate synthase component 2; Short=HEPPP synthase subunit 2 gi|1731683|dbj|BAA08725.1| component II of heptaprenyl diphosphate synthase [Geobacillus stearothermophilus] Length = 320 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 128/232 (55%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ V + + + S+ + + +L+ +GGKR+RP+ L A +Y + +A A Sbjct: 13 DLAAVEEELERAVQSEYGPLGEAALHLLQAGGKRIRPVFVLLAARFGQYDLERMKHVAVA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD+L +++ + E + A Sbjct: 73 LELIHMASLVHDDVIDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLERMAELGNPRAH 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ + GE+ Q+ D YL I+ KTA+L +A+ ++ +L AG + Sbjct: 133 QVLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLGALAAGAPEPI 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + L +G +G++FQ+ DD+LD+ G ++GK G D G TLPV+ A Sbjct: 193 VKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVLYAL 244 >gi|325567558|ref|ZP_08144225.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC 12755] gi|325158991|gb|EGC71137.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC 12755] Length = 334 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 155/327 (47%), Gaps = 43/327 (13%) Query: 20 LKRICSDVEM--------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH------- 64 LK +CS +E I DV+ +SGGK LRP L A + GD H Sbjct: 23 LKTVCSIIEEHVTVRNKEIQDVLIDFTYSGGKMLRPALFFLFADL----GDPHYKKTDQL 78 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +A ++E +H ATL+HDD++DDS LRR +V + +G +V GD L +Q F ++IE+ Sbjct: 79 TKIAASLEILHMATLIHDDIIDDSPLRRSQVTVQAKYGKDIAVYTGDLLFTQFFELLIES 138 Query: 125 -KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 L+ + L GEL Q+ N+ + +DYL I KTA LF A + Sbjct: 139 MNGSPFLKTNAQAMKRLLLGELDQMHTRYNIHESIDDYLQSINGKTAELFWLACLEGAHF 198 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+ ++ G N+GIAFQ+ DD+LDY + + K I ED G TLP++ A + Sbjct: 199 GGLDTENQERAGEIGRNIGIAFQVFDDILDYTSDSGTLKKPILEDLAQGVYTLPLLFAKE 258 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR----------AYSYGQK 293 + + +N KKA + + E + + D R A +Y QK Sbjct: 259 QAPAA----FAPYLN---------KKAALSLAEAQEVADLVVRYGGVEKARAFAVTYTQK 305 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A D + LP++ K + + + LQR Sbjct: 306 ALDDIDLLPEAPSKAKIRSLTELLLQR 332 >gi|313884478|ref|ZP_07818239.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8] gi|312620262|gb|EFR31690.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8] Length = 328 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/319 (29%), Positives = 156/319 (48%), Gaps = 15/319 (4%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--RGDNHVL-- 66 ++++V LI +R+ I V+ L +GGK LRP L E+ R +H Sbjct: 14 NIKQVQALIDQRVVVANPQITQAVQALNAAGGKFLRPAFFF---LFTEFGPRVKDHTQKE 70 Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +A ++E +H ATL+HDD++DDS LRR +V + +G +V GD L + F +++ Sbjct: 71 KLLKVAASLEILHIATLIHDDIIDDSPLRRSQVTIQAKFGKDVAVYTGDLLFTIFFELIL 130 Query: 123 ETKSQEALEALSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ET A++ A + GEL Q+ L D T +DYL I KTA LF+ A + + Sbjct: 131 ETMQTSDYMAINAQAMKKILMGELDQMQLYYKQDQTIDDYLQAIAGKTAALFALAAQEGA 190 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 G N V ++ G +G+AFQ++DD+LDY K + ED G +LP+++A Sbjct: 191 YFGGADNHVVALAETIGHKIGMAFQILDDILDYSASAETFTKPVLEDLAQGIYSLPLLIA 250 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + + +E + K + + L A SY Q+A ++ L Sbjct: 251 IDQHPDYFGPLLSKKQTMTQADMEAVAKGVV---DYGGLDGARQMARSYTQEALAAIDSL 307 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PD+ K++L ++ + L+R Sbjct: 308 PDNKSKQTLKQLTQYLLKR 326 >gi|302795999|ref|XP_002979762.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii] gi|300152522|gb|EFJ19164.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii] Length = 415 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/290 (32%), Positives = 159/290 (54%), Gaps = 15/290 (5%) Query: 40 SGGKRLRPMLT--LATALMLEYRGDN----HVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +GGKR+RP + ++ A M R + H LA E IHTA+L+HDDV+D+S +RRG Sbjct: 132 AGGKRMRPAIVFLVSRATMQLARLNTIHLQHRRLAEITEMIHTASLIHDDVLDESDVRRG 191 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K ++G + +VL GDF+ +Q+ + + E ++ +S V A GE++Q S + Sbjct: 192 KETVHQLYGTRIAVLAGDFMFAQSSWYLANLDNLEVIKLISQVIKDFASGEIQQASSLFD 251 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 D+T ++YL KTA L +A+ +++ +G SV + YG LG+AFQ+VDD+LD Sbjct: 252 SDITLDNYLDKSYYKTASLIAASTRSAAIFSGADPSVCDKMFDYGKYLGLAFQIVDDILD 311 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI--SVENLKKAF 271 + ++GK G D G T P + A + + K ++G + +V+ +K+ Sbjct: 312 FTQSTAQLGKPAGSDLAKGNLTAPALFALDKEPELRKLIDSEFTDEGSLESAVQLVKRGG 371 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 I +RA+ + +A + A +L CLP + + SL ++V++ L+R+ Sbjct: 372 GI---DRAMELAKQKA----ELAIQALECLPVGAARSSLEKMVEYVLERV 414 >gi|284802375|ref|YP_003414240.1| hypothetical protein LM5578_2131 [Listeria monocytogenes 08-5578] gi|284057937|gb|ADB68878.1| hypothetical protein LM5578_2131 [Listeria monocytogenes 08-5578] Length = 321 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 109/314 (34%), Positives = 165/314 (52%), Gaps = 16/314 (5%) Query: 10 KDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 KD++ V + K + + E D +L+ +GGKR+RPM +A + + V A Sbjct: 12 KDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPNADFDAVKNA 71 Query: 69 C-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++ + E K Sbjct: 72 SVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDV 131 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G Sbjct: 132 AAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQS 191 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV A Sbjct: 192 EADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAM----- 246 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRE---NRALVDTEYRAYSYGQKAK---DSLRCL 301 E F K I+ +I+ E + ++ E E A +Y +KA DSL + Sbjct: 247 -EDPFLKKRIS--QITEETPAEEIAVLVEEVKKTGAKQAEDVATTYLKKAVEILDSLPQV 303 Query: 302 PDSSWKKSLMEVVD 315 P+ K ++ V+D Sbjct: 304 PELKPLKQIVRVLD 317 >gi|189502166|ref|YP_001957883.1| hypothetical protein Aasi_0775 [Candidatus Amoebophilus asiaticus 5a2] gi|189497607|gb|ACE06154.1| hypothetical protein Aasi_0775 [Candidatus Amoebophilus asiaticus 5a2] Length = 324 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/260 (32%), Positives = 140/260 (53%), Gaps = 17/260 (6%) Query: 3 MLEDLTL---KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-- 57 ML D++L K++ KVN I + + ++ +I V++Y GK+LRP L L A +L Sbjct: 1 MLTDISLLVSKELSKVNDYINRCLYTENPVIQQVIQYSFQQQGKQLRPQLVLIVASVLGN 60 Query: 58 -----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112 RG A + +H A+L+HDDVVD++ RR K WGN+ +VL GD+ Sbjct: 61 DITEKTRRG------AALVSLLHHASLIHDDVVDEATYRRHKETVNARWGNKLAVLFGDY 114 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 +L+ + + IE + + L L++ T++EGE+ QL ++ + +E YL +I+ KTA L Sbjct: 115 VLANSLQIAIENQDYDFLPMLTITTQTMSEGEILQLKQAQEIMASEATYLEIIQKKTASL 174 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 +A+ + ++ + + + G +G+AFQL DD++DY G GK D + Sbjct: 175 LAASCAMGAMSVSASQEQIEIMYAIGEQIGMAFQLSDDLIDY-GVTTNAGKATFMDLKAH 233 Query: 233 KPTLPVILAFQRGTKREKNF 252 TLP+I A Q+ + E + Sbjct: 234 TLTLPLIYALQQASASETQY 253 >gi|300932807|ref|ZP_07148063.1| putative polyprenyl diphosphate synthase [Corynebacterium resistens DSM 45100] Length = 340 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 155/296 (52%), Gaps = 11/296 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSAL 90 D + +L +GGKR R + TL AL + +V A +E H ATL HDDV+D++ Sbjct: 51 DKINHLAIAGGKRFRVVFTLLAALYGDKPTSQNVYKAAVVVELTHLATLYHDDVMDEADR 110 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQ 147 RRG +A + WGN ++L GD+L + A M+ + + +S A T E G++R+ Sbjct: 111 RRGADSANMRWGNSIAILAGDYLFAVASDMLADLGAA----TVSHFASTFRELVTGQMRE 166 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + E Y+ VI+ KT VL +AA + + +G VR AL ++G N+G FQ+ Sbjct: 167 TVGCAEGEDPIEHYMTVIQEKTGVLIAAAGFLGAEHSGAPAEVRDALHAFGRNMGQVFQI 226 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 VDD++D + E GK G D R G TLPV+ A ++ + E I G + + L Sbjct: 227 VDDIIDIWSDPEESGKVPGTDLREGVFTLPVLYAMRQ--EDEVGARLREILTGPVEEDAL 284 Query: 268 -KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 ++A +++ ++ + + Y +KA+ L+ LP S +L E++ F L+RL Sbjct: 285 VEEALELIKRSQGRERAQEQVNLYCEKAEAELQKLPASEATDALRELLGFALKRLG 340 >gi|212692554|ref|ZP_03300682.1| hypothetical protein BACDOR_02051 [Bacteroides dorei DSM 17855] gi|237709128|ref|ZP_04539609.1| octaprenyl-diphosphate synthase [Bacteroides sp. 9_1_42FAA] gi|237724389|ref|ZP_04554870.1| octaprenyl-diphosphate synthase [Bacteroides sp. D4] gi|265752655|ref|ZP_06088224.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_33FAA] gi|212664839|gb|EEB25411.1| hypothetical protein BACDOR_02051 [Bacteroides dorei DSM 17855] gi|229437258|gb|EEO47335.1| octaprenyl-diphosphate synthase [Bacteroides dorei 5_1_36/D4] gi|229456824|gb|EEO62545.1| octaprenyl-diphosphate synthase [Bacteroides sp. 9_1_42FAA] gi|263235841|gb|EEZ21336.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_33FAA] Length = 324 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 15/296 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 +V+ Y+ GK +RP+L L A + D+ + A ++E +HTA+L+HDDVVD+S R Sbjct: 35 EVLSYIKQRNGKMMRPILALLIAKLFGEINDSTLHAALSLELLHTASLVHDDVVDESDKR 94 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC---TLAEGELRQL 148 RG+ + ++ N+ SVLVGD++L+ + T+ + + LVAC L+EGE+ QL Sbjct: 95 RGQSSVNAIYNNKVSVLVGDYMLATSLKHSAMTRE---ITIVDLVACLGQNLSEGEIIQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + + +EE Y VI+ KTA LF+A+ E ++ + + + + +G +GIAFQ+ Sbjct: 152 ANINASEFSEEVYYDVIRKKTAALFTASAEAGAISVHASDEMVKNARLFGEMIGIAFQIK 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+ DY +E+GK G D R GK TLP + E I S E++ Sbjct: 212 DDIFDYYSS-DEIGKPTGNDMREGKLTLPALYVLNTFDDEEMRKLALCIRSLDASDEDIA 270 Query: 269 KAFIIMRENRALVDTEYRAY-SYGQKAKDSLRCLPDSSW---KKSLMEVVDFCLQR 320 + FI + + ++ +A Y KA L LP S+ K +L +D+ ++R Sbjct: 271 R-FIEYTKVKGGIEYARQAMVDYRNKA---LALLPQSAGQAVKDALTAYIDYVIER 322 >gi|153807183|ref|ZP_01959851.1| hypothetical protein BACCAC_01461 [Bacteroides caccae ATCC 43185] gi|149130303|gb|EDM21513.1| hypothetical protein BACCAC_01461 [Bacteroides caccae ATCC 43185] Length = 324 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 92/288 (31%), Positives = 148/288 (51%), Gaps = 1/288 (0%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 VV ++ GK +RP+L L A + + A ++E +H A+L+HDDVVD+S RR Sbjct: 36 VVAHIRQRSGKMMRPILVLLVARLYGVVSPATLHAAVSLELLHNASLVHDDVVDESTERR 95 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G+++ ++ N+ +VL GD+LL+ + T S + + +S + LA+GEL QLS Sbjct: 96 GQLSVNAIFNNKVAVLTGDYLLATSLVHAELTNSHQIIRLVSSLGQDLADGELLQLSNVS 155 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N +E Y VI+ KTA LF+A ++ GV + + G +GI FQ+ DD+ Sbjct: 156 NHSFSETVYFDVIRKKTAALFAACTAAAAYSVGVSEEEVKLARLLGEYIGICFQIKDDIF 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY + E+GK G D GK TLPV+ A R + + +G +++ + + Sbjct: 216 DYF-DSKEIGKPTGNDMLEGKLTLPVLYALNRANDNQATEIALKVKEGTATLDEIARLIA 274 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +EN + +Y QKA L LPDS+ +L +D+ + R Sbjct: 275 FTKENGGIEYAVRTMNAYKQKAFGLLASLPDSAICVALRSYLDYVVDR 322 >gi|307330864|ref|ZP_07609998.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu 4113] gi|306883489|gb|EFN14541.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu 4113] Length = 329 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 144/293 (49%), Gaps = 4/293 (1%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + +V +L +GGKRLRP+L L A + V A E +H A+L HDDV+D + Sbjct: 37 VAEVAGHLFGNGGKRLRPLLALVGAEFGDRDPSAAVRAATLAELVHVASLYHDDVMDQAR 96 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + WGN T+VL G++LLS+A + E EA+ S V L G++R+L Sbjct: 97 TRRGVPSVNARWGNTTAVLAGNWLLSKAAQLAAEL-GPEAIRLQSKVTNRLIMGQIRELV 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + D Y V+ K+A L + AL++ ++ G QAL YG +LGIAFQ+ D Sbjct: 156 GPSDDDDPLSHYFTVVAGKSASLIAMALQLGAVRTGAPEPAVQALAEYGEHLGIAFQISD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS--TINDGKISVENL 267 D+LD GK G+D G +LPV+LA + E ++ T L Sbjct: 216 DILDITSTSEVSGKEQGKDLAIGVASLPVLLALA-DERPEAGELRTLLTAAAAGPEGAGL 274 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +A ++ AL + ++ +A+ ++ LPD + L + DF +R Sbjct: 275 PRAVALLHRCGALAEARTVMHARLLRARTAVNGLPDGPATRVLHALCDFVARR 327 >gi|304382638|ref|ZP_07365132.1| geranyltranstransferase [Prevotella marshii DSM 16973] gi|304336263|gb|EFM02505.1| geranyltranstransferase [Prevotella marshii DSM 16973] Length = 324 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/247 (33%), Positives = 138/247 (55%), Gaps = 9/247 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 +KY++ GGKR+RP L L + Y+ D +L ACAIE H TLLHDD++D + +R Sbjct: 31 IKYVLSMGGKRIRPTLMLLAYNL--YKDDPESILSTACAIETYHNYTLLHDDLMDHADVR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQL 148 RG+ WG T++L GD +L A+ + ++ ++ L+ + A + EG+ + Sbjct: 89 RGRATVHKRWGANTAILSGDSMLVLAYERLARCRADKLKDILDLFTETALEIGEGQEFDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S + DV EE+Y+ +I+ KT+VL + A+++ +++A + + L +G +G+AFQL Sbjct: 149 SFEQRDDVKEEEYIEMIRLKTSVLLACAMKMGAILADAPPADAENLYKFGEQIGLAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD LD G+ GK IG D + K T +I AF + K+++ + I GK +N + Sbjct: 209 DDFLDVYGDPKLFGKAIGGDIVSNKKTYMLINAFAKADKKQREELMTWI--GKTDFDNNE 266 Query: 269 KAFIIMR 275 K + R Sbjct: 267 KVETVTR 273 >gi|71000625|ref|XP_754994.1| hexaprenyl pyrophosphate synthetase Coq1 [Aspergillus fumigatus Af293] gi|66852631|gb|EAL92956.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus fumigatus Af293] gi|159128008|gb|EDP53123.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus fumigatus A1163] Length = 450 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/275 (34%), Positives = 143/275 (52%), Gaps = 17/275 (6%) Query: 58 EYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112 ++ GD ++L LA E IHTA+LLHDDV+D++ RR +A L +GN+ +VL GDF Sbjct: 179 DFVGDENILPSQRRLAEITELIHTASLLHDDVIDNAVSRRSSNSANLQFGNKMAVLAGDF 238 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVI 165 LL +A + + E E L+ V L EGE QL + KN T+E YL Sbjct: 239 LLGRASVALARLRDPEVTELLATVIANLVEGEFMQLKNTVADEKNPVFTDETISYYLQKT 298 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA L S + ++L+ G V +A SYG NLG+AFQLVDD+LDY E+GK Sbjct: 299 YLKTASLISKSCRAAALLGGSAPEVVEAAYSYGRNLGLAFQLVDDLLDYTVSGVELGKPA 358 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 G D G T P++ A+++ + + +G ++++A I+ + + T Sbjct: 359 GADLELGLATAPLLFAWKQNPELGPLVGRKFSQEG-----DVQRAREIVYNSDGIEQTRA 413 Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A Y KA ++ PDS K L+++ + + R Sbjct: 414 LAQEYADKAVAAIADFPDSEAKSGLIQMCEKTMNR 448 >gi|284995517|ref|YP_003417285.1| hypothetical protein LM5923_2082 [Listeria monocytogenes 08-5923] gi|284060984|gb|ADB71923.1| hypothetical protein LM5923_2082 [Listeria monocytogenes 08-5923] Length = 321 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 109/314 (34%), Positives = 165/314 (52%), Gaps = 16/314 (5%) Query: 10 KDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 KD++ V + K + + E D +L+ +GGKR+RPM +A + + V A Sbjct: 12 KDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPNADFDAVKNA 71 Query: 69 C-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++ + E K Sbjct: 72 SVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDV 131 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G Sbjct: 132 AAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQS 191 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV A Sbjct: 192 EADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAM----- 246 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRE---NRALVDTEYRAYSYGQKAK---DSLRCL 301 E F K I+ +I+ E + ++ E E A +Y +KA DSL + Sbjct: 247 -EDPFLKKRIS--QITEETPAEEIAVLVEEVKKTGAKQAEDVATTYLKKAVEILDSLPQV 303 Query: 302 PDSSWKKSLMEVVD 315 P+ K ++ V+D Sbjct: 304 PELKPLKQIVRVLD 317 >gi|332519159|ref|ZP_08395626.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4] gi|332045007|gb|EGI81200.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4] Length = 324 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/286 (32%), Positives = 148/286 (51%), Gaps = 10/286 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y++ GGKRLRP+LTL TA + Y + A +IE H +L+HDD++DD+ LRRG Sbjct: 31 IDYILKLGGKRLRPVLTLMTAEVFNYDYKKALDAALSIEVFHNFSLVHDDIMDDAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEAL-SLVACTLAEGELRQLSL 150 + W T++L GD +L A+ + ++K+ +AL L S A + EG+ + Sbjct: 91 EQTVHEKWDVNTAILSGDAMLIMAYQLFENYDSKTFQALAKLFSKTALEVCEGQQYDVDF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DVT +YL +I+ KTAVL AA+++ +++A N + + ++G LGIAFQL DD Sbjct: 151 ETRDDVTISEYLKMIEYKTAVLVGAAMKMGAIVAKASNEDQDGIYNFGRLLGIAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVEN 266 LD G GK +G D K T + A + EK + + D +E Sbjct: 211 YLDAFGNPETFGKQVGGDIIENKKTYLYLKAIENLETSEKKQIEQLFSVNLQDNDDKIET 270 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 +K+ F+ +A T+ +Y KA L L S KK++++ Sbjct: 271 VKEFFVKSEAAKA---TQAEIENYTNKAFAVLETLNISEEKKTILK 313 >gi|89894958|ref|YP_518445.1| hypothetical protein DSY2212 [Desulfitobacterium hafniense Y51] gi|89334406|dbj|BAE84001.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 326 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 140/294 (47%), Gaps = 4/294 (1%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 + I D L+ SGGKRLRP+LTL +A + A A E IH A+L+HDDV+D Sbjct: 34 DTIKDSCLLLLDSGGKRLRPLLTLQSAQCFGPLNSAALDAAVAAELIHMASLIHDDVIDH 93 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S RRG GNQ +VL GD++ ++AF ++ ++ L ++ +GE++Q Sbjct: 94 SDRRRGIPTINSQRGNQVAVLAGDYVFAEAFRILANKHLLTSMSYLVDAIQSMCDGEIQQ 153 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 +L V Y I KT +L ++ + AG +AL YGMNLG A+Q+ Sbjct: 154 AEQRCDLAVEPSQYFQRIAQKTGILLASCCCSGAASAGANQEAVEALGQYGMNLGYAYQI 213 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW-KSTINDGKISVEN 266 +DD+LD+ G GK D NG TLPVI K W + + +S N Sbjct: 214 IDDILDFTGNPQVTGKPAAADLLNGYITLPVIYLLD---KPLYGPWAREMLQARDLSPAN 270 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +++ + + AL + A Q A +L LP S K L E+ L R Sbjct: 271 VQRIIQALISSGALNEAFTTALRCAQTAVQALSSLPPSPSKTFLSELTHTILYR 324 >gi|167465350|ref|ZP_02330439.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Paenibacillus larvae subsp. larvae BRL-230010] Length = 253 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 77/240 (32%), Positives = 128/240 (53%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 KD+ + + + I D+ + D + +GGKR+RP+ L Y + +A Sbjct: 12 KDIAFIEKSLERSIDVDLPTLRDASLLYLKAGGKRIRPVFVLLAGEFGHYDLERMKHIAV 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +E IH A+L+HDDV+DD+ RRGK R W N+ ++ GD++ ++A +V E K+ Sbjct: 72 PLELIHMASLVHDDVIDDAETRRGKATVRSKWDNRIAMYTGDYVYAKALTLVTELKNPAI 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + +S ++ GE+ Q+ L T DYL IK KTA+L + + ++ ++ A + Sbjct: 132 HQIMSKAMIEMSIGEMEQIRLFFEHGQTLRDYLRRIKRKTALLIAVSCQLGAMTAEASEN 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L +G +G+AFQ+ DD+LD G ++GK G D + G TLPV+ A Q R+ Sbjct: 192 YAKRLFHFGYYVGMAFQIRDDILDLVGTEKQIGKPPGSDIKQGNITLPVLYALQEPKLRK 251 >gi|213964989|ref|ZP_03393188.1| bifunctional short chain isoprenyl diphosphate synthase [Corynebacterium amycolatum SK46] gi|213952525|gb|EEB63908.1| bifunctional short chain isoprenyl diphosphate synthase [Corynebacterium amycolatum SK46] Length = 351 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 7/325 (2%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + LE + M K L++ + + + + V +L +GGKR RPM T+ A E Sbjct: 30 EALEATITEGMRKSEDLLITELGRGEDFLAERVSHLAQAGGKRFRPMFTMLAAQFGETPE 89 Query: 62 DNHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + V+ A + E H ATL HDDV+D++ RRG +A W N ++L GD+L + A + Sbjct: 90 SDKVITAATVLELTHLATLYHDDVMDEADKRRGVPSANSRWDNTVAILAGDYLFAVASRL 149 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE--EDYLHVIKSKTAVLFSAALE 178 + E S E++ + L G++R+ +L + E E YL VI KT VL ++A Sbjct: 150 LAELGS-ESVAHFAETFGVLVTGQMRECLNDLDLPIEERIERYLKVIAEKTGVLIASAGY 208 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + AG + AL+ YG +GI FQ+VDD++D ++ GK G D R G TLPV Sbjct: 209 LGAYHAGASADISNALRRYGELIGIVFQIVDDIIDISSNTDQSGKTPGTDLREGVFTLPV 268 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 + A Q T + + G +S + L +A ++ + + + ++ Sbjct: 269 LYALQEDTPAADRLREILV--GPVSDDVLVDEALELLAQTNGVARAMEKVNELLDESDRV 326 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPD + K++L V + ++R+ Sbjct: 327 IADLPDCAAKEALRHVARYTVERVG 351 >gi|87303352|ref|ZP_01086140.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. WH 5701] gi|87282000|gb|EAQ73962.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. WH 5701] Length = 323 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 92/292 (31%), Positives = 152/292 (52%), Gaps = 8/292 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKR+RP + L + L G+ H LA E IHTA+L+HDDVVD+++ Sbjct: 36 AAEHLFSAGGKRIRPGIVLLLSRALSPDGELSSRHRRLAEITEMIHTASLVHDDVVDEAS 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + N+ +VL GDFL +QA + ++ LS V LA+GE+RQ Sbjct: 96 TRRGVDTVHSRFNNRLAVLAGDFLFAQASWHLANLDDLAVVKLLSRVIMDLADGEVRQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E YL KTA L + + + S +++G+ + + L +G LG+AFQ+VD Sbjct: 156 YRYDTGQSFETYLDKSYCKTASLIANSAKASGVLSGLADDRLEDLYRFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D G T PV+ A + E+ I ++L + Sbjct: 216 DILDFTGSDQQLGKPAASDLATGYLTAPVLYALE-----ERPALAGLIERELCEPDDLAQ 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++R A+ + A + ++A ++L+ L S + +L+ + +F L RL Sbjct: 271 ALALVRGCEAIPRSRALAEGFAREAGEALQWLSPSDSRTALLGLPEFVLSRL 322 >gi|241888826|ref|ZP_04776132.1| heptaprenyl diphosphate synthase component 2 [Gemella haemolysans ATCC 10379] gi|241864502|gb|EER68878.1| heptaprenyl diphosphate synthase component 2 [Gemella haemolysans ATCC 10379] Length = 315 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 160/300 (53%), Gaps = 8/300 (2%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LEYRGDNHVLLACAIEFIHTATLLHD 82 S+ E + ++VK +GGKR+R +L L A + E + + +A +E IHTA+L+HD Sbjct: 22 SNDEQLDEIVKKYFLNGGKRVRVLLLLMCAKLGNFELNKKDIIRMASIVEIIHTASLIHD 81 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 D++D++ RRG V + N+ ++ VGD+L S V + +++ L+ L Sbjct: 82 DIIDNADTRRGSVTMNKEYSNEFALRVGDYLFSVVLKEVAKFDNEKIHLYLAETLKELCI 141 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GEL Q ++ DYL IK KTA+L + A S++A + ++ SYG LG Sbjct: 142 GELIQADGLYDIKTRRLDYLKKIKRKTAILIAFACVAGSIVADASDEDIRSAFSYGYYLG 201 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +++Q++DD LD+ G +GK +G+D NG TLP +LA + + NF K T ++ K Sbjct: 202 MSYQIIDDYLDFVGGTQNLGKEVGQDLMNGNITLPALLAKEENPELFCNFTKDTSSEEKD 261 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 + N I ++ L +T + Y +KA++S+ + DS+ K L +++ +R N Sbjct: 262 EIINY-----IRNNDKVLSETLTVSRRYLEKAQESIDNI-DSTVKTELTFIMNKLARREN 315 >gi|123965918|ref|YP_001010999.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9515] gi|123200284|gb|ABM71892.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9515] Length = 323 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 90/291 (30%), Positives = 160/291 (54%), Gaps = 8/291 (2%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKRLRP +L ++ A+ ++ H LA E IHTA+L+HDDVVD+++ R Sbjct: 38 EHLFSAGGKRLRPGIVLLISKAISRDFNLTTKHKRLAEITEMIHTASLVHDDVVDEASTR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG + + +VL GDFL +QA + + + ++ LS V LAEGE++Q Sbjct: 98 RGVDTVHSRFNTRVAVLAGDFLFAQASWHLANLDNVKVVKLLSRVIMDLAEGEIKQNLNR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + T Y++ KTA L + + + + +++ +++ L +G N+G+AFQ+VDD+ Sbjct: 158 FDSGQTFSKYINKSYCKTASLIANSTKAAGVLSNLEDDKLNCLYEFGKNIGLAFQVVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD+ G ++GK D +G T PV+ A + E IN + E+L A Sbjct: 218 LDFTGNDKQLGKPAVSDLASGYLTAPVLYALE-----ENKNLSVLINRELVEKEDLNNAL 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 I+ ++A+ + A + +K+++ LP+S +K++L+ + +F L R++ Sbjct: 273 NIVMNSQAIQRSRKLAEDFAVLSKEAILWLPNSEYKRALLALPEFVLSRIS 323 >gi|302330014|gb|ADL20208.1| Putative polyprenyldiphosphate synthase component [Corynebacterium pseudotuberculosis 1002] Length = 339 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/327 (30%), Positives = 165/327 (50%), Gaps = 21/327 (6%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 ED++ M V L+ K +C + I + VK+L +GGKR RPM AL+ GD+ Sbjct: 25 EDIS-AGMTCVEELLQKELCVGEDFIVEKVKHLANAGGKRFRPMF----ALLASQYGDHP 79 Query: 65 VL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V A +E H ATL HDDV+D++A RRG +A W N ++L GD LL+ Sbjct: 80 VSEDVIKAAVVVEMTHLATLYHDDVMDEAAKRRGVESANARWNNSVAILAGDILLAHVSR 139 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + + + + S L G++R+ D E Y+ VI+ KT VL ++A + Sbjct: 140 LMADLGT-DTVRHFSETFGDLVTGQMRETIGVGEGDPIEH-YMAVIREKTGVLIASAGYL 197 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +L +G +AL++YG +G+ FQ+VDD++D + + GK G D R G TLPV+ Sbjct: 198 GALHSGATADHIEALRAYGAAIGMVFQIVDDIIDIFSDSEDSGKTPGTDLREGVFTLPVL 257 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE----NRALVDTEYRAYSYGQKAK 295 A + T + ++T+ + + ++ + +RAL D + Y +A+ Sbjct: 258 YALREQTPIGEEL-RATLTGPVTDDTTVARVLDLLTQSTGRDRALADVHH----YLNEAE 312 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322 L LP ++ ++L + F +QR+ Sbjct: 313 AQLELLPQNATTEALRNLARFTVQRVG 339 >gi|289613953|emb|CBI59187.1| unnamed protein product [Sordaria macrospora] Length = 444 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 96/267 (35%), Positives = 134/267 (50%), Gaps = 24/267 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + + Sbjct: 187 LAEITELIHTASLLHDDVIDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALARLRH 246 Query: 127 QEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E L+ V L EGE QL + KN +EE YL KTA L S + Sbjct: 247 AEVVELLATVIANLVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYLKTASLISKSCRA 306 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+L+ G + A YG NLG+AFQLVDD+LDY E+GK G D G T P++ Sbjct: 307 SALLGGADAATVDAAYLYGKNLGLAFQLVDDMLDYTRSEKELGKPAGADLELGLATAPLL 366 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKK------AFIIMRENRALVDTEYRAYSYGQK 293 A WK+ G + +K A ++ ++ + T A Y +K Sbjct: 367 FA-----------WKTMPELGPLVGRKFEKEGDAARARELVLQSNGIEQTRALAQDYAEK 415 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A +++ P+S K L+E+ L+R Sbjct: 416 AIEAISGFPESEAKDGLIEMAVKTLKR 442 >gi|315282959|ref|ZP_07871252.1| heptaprenyl diphosphate synthase component II [Listeria marthii FSL S4-120] gi|313613406|gb|EFR87257.1| heptaprenyl diphosphate synthase component II [Listeria marthii FSL S4-120] Length = 324 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/287 (36%), Positives = 154/287 (53%), Gaps = 15/287 (5%) Query: 36 YLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +L+ +GGKR+RPM L+ L E D + AIE IH A+++HDDVVDD+ LRRG+ Sbjct: 42 HLLEAGGKRIRPMFVCLSARLAAEADFDAVKNASVAIELIHMASIVHDDVVDDADLRRGR 101 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 + WGN ++ GDFL +++ + E K A + LS V L+ GE+ QL N Sbjct: 102 ETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNF 161 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 D + +YL IK KTA+L +A+ + +++G + Q L +G +G+AFQ+ DDVLD+ Sbjct: 162 DQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDF 221 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274 G E+GK GED R G TLPV A E F K I+ +I+ E + ++ Sbjct: 222 VGTEKELGKPAGEDLRQGNVTLPVFFAM------EDPFLKKRIS--QITEETPAEEIAVL 273 Query: 275 RE---NRALVDTEYRAYSYGQKAK---DSLRCLPDSSWKKSLMEVVD 315 E E A +Y +KA DSL +P+ K ++ V+D Sbjct: 274 VEEVKKAGAQKAEDIATAYLKKAVAILDSLPQVPELKPLKQIVRVLD 320 >gi|307701352|ref|ZP_07638373.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16] gi|307613513|gb|EFN92761.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16] Length = 339 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 171/330 (51%), Gaps = 15/330 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 LE+ + +E+V +++ + E ++V +L +GGKR+RP+L L + + + GD Sbjct: 11 LEEKLTEALERVEARLVEETRTAAENTTEIVSHLRAAGGKRMRPLLVLLISQLGKAGGDA 70 Query: 64 HV---LLAC--AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + L+A A+E H A+L HDD++DD+ +RRG AA + W N +V+ GD + ++A Sbjct: 71 PISEDLIAAGVAVELTHLASLYHDDLMDDATVRRGVTAAHVKWNNTLAVMAGDLIFARA- 129 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +++ ++ ++ + L G++ + D + YLHV++ KT L A Sbjct: 130 SLIVSDFGRKLMKHHARTFQRLCLGQMHDILGPGATDDPIDFYLHVLREKTGSLIGTAAL 189 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + ++G + A+ ++G +LG+AFQ+ DDVLD R GK G D R+G TLPV Sbjct: 190 YGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDLRSTAAVSGKTPGADLRDGTKTLPV 249 Query: 239 IL-----AFQRGTKREKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQ 292 +L A + +++ K + +S + L + + E+R +T A ++ + Sbjct: 250 LLLEKSVAAGGASDADRHLMKMIGDHEALSADAALSEVVDRLAEHRVTRETAALAETWVE 309 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +A L LP+ + K +L E F Q++N Sbjct: 310 RALGHLAVLPEGAVKSALTE---FSRQQIN 336 >gi|256396778|ref|YP_003118342.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928] gi|256363004|gb|ACU76501.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928] Length = 351 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 11/321 (3%) Query: 7 LTLKD-MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 + LKD + +V ++L+ SD I ++ +L +GGKR RP+L L A + V Sbjct: 33 VALKDGLLRVEEVLLEYTRSDHAYISEITSHLAQAGGKRTRPLLVLLAAQFGDAARAGVV 92 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A IE H ATL HDDV+D++ALRRG +A W N ++L GDFL ++A ++ E Sbjct: 93 EAAVVIELTHLATLYHDDVMDEAALRRGVASANQRWDNSLAILSGDFLFARASTLLSELG 152 Query: 126 SQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +A+ + A T L G++ + KN + +L V+ KT L + A ++ Sbjct: 153 P----DAVRIQAETFERLVSGQISESVGPKNGQNPVDHHLEVLAGKTGSLIATAARFGAM 208 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AG + L +G G+AFQL DD+LD E + GK G D R G TLP+++A Sbjct: 209 FAGCTAEQERILADFGELFGVAFQLSDDLLDIASESEQSGKTPGIDLREGVHTLPMLIAL 268 Query: 243 Q-RGTKREKNFWKSTINDGKISVEN--LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 G+ + + +S ++ +A ++R + ++ Y +KAK L Sbjct: 269 AMDGSADPETARLQDLLHTDLSTDDAAFDEALALLRAHPSMGQARDVVRGYAEKAKSVLE 328 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP+ K++L V D + R Sbjct: 329 PLPEVPAKEALRAVCDVVISR 349 >gi|330686015|gb|EGG97638.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis VCU121] Length = 319 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 129/235 (54%), Gaps = 2/235 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLA 68 +++KV + + I S +++ + +L+ SGGKR+RP + ++ + G ++ +A Sbjct: 9 EIKKVEKRLEQAIHSQDKVLEEAAFHLLSSGGKRVRPAFVILSSQFGKEEGVSEDTYKVA 68 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRG++ W T+++ G+FLL+ + E K + Sbjct: 69 VALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQTTAIITGNFLLALGLQHLSEIKDKR 128 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 E LS + GEL Q N T +YL I KTA+L A EV ++ AG Sbjct: 129 VHEILSESIVDVCRGELFQFQDQFNSQQTMTNYLRRINRKTALLIQLATEVGAITAGSDI 188 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + LK G +G++FQ+VDD+LD+ ++GK +G D NG TLPV+L + Sbjct: 189 KTVRKLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPVLLEMK 243 >gi|229918708|ref|YP_002887354.1| trans-hexaprenyltranstransferase [Exiguobacterium sp. AT1b] gi|229470137|gb|ACQ71909.1| Trans-hexaprenyltranstransferase [Exiguobacterium sp. AT1b] Length = 320 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 83/311 (26%), Positives = 162/311 (52%), Gaps = 4/311 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +++++++ + R+ +D +I + L+ +GGKR+RP L +A E + +A Sbjct: 12 REIDQIDQFLSTRVRTDHPVIESASRQLLDAGGKRIRPAFVLLSAGFGETKDIRLTKVAS 71 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 ++E IH A+L+HDDV+DD+ LRRGK + ++ G+ L +A +V E S E Sbjct: 72 SLELIHMASLVHDDVIDDAMLRRGKPTVMERYDETVAMYTGNTLFGEAIRLVSEIDSPEV 131 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + ++ + GE+ Q+ + + YL I KTA+L + ++I+G Sbjct: 132 MRIMADTMERICVGEINQIQDQYEWGQSPKRYLDRIARKTALLIETSCAAGAVISGASPQ 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L +G ++G+AFQ+ DD+LD+ + ++GK +GED ++G TLP++ + + E Sbjct: 192 TVKQLSLFGYDIGMAFQMTDDLLDFTAKSFQLGKPVGEDLKHGHKTLPLLYSSEDPDFYE 251 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + D +++ +++ ++ N L ++ Y +A L LPD K+S Sbjct: 252 RLRQVNASTDAEVTKSLVRE----VQRNGTLERSQRTIDRYVNRAIRRLDGLPDVPDKRS 307 Query: 310 LMEVVDFCLQR 320 L+E+ + +R Sbjct: 308 LIEIAQYIGKR 318 >gi|288928710|ref|ZP_06422556.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 317 str. F0108] gi|288329694|gb|EFC68279.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 317 str. F0108] Length = 325 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 119/205 (58%), Gaps = 7/205 (3%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GGKR+RP+L L LM + G + A +E +HTA+L+HDDVVD+S RRG+ + Sbjct: 44 GGKRMRPILIL---LMTKSFGKVTSVAQYAAVGLELLHTASLVHDDVVDESGERRGQASV 100 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 + N+ +VLVGD++LS A + T + + L+ + TL+ GE+ QL+ N + + Sbjct: 101 NASYNNKVAVLVGDYILSTALLNIARTNDCDIVCDLAELGRTLSNGEILQLTNIANTNFS 160 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 EE Y VI+ KTA LF A + + G +A +++G N+G+ FQ+ DD+ DY + Sbjct: 161 EEVYFEVIRQKTAALFEACAVIGAKAGGADRQAVEAARAFGRNVGVIFQIRDDIFDYY-Q 219 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAF 242 ++GK G D GK TLPV+ A Sbjct: 220 SADLGKPTGNDMAEGKLTLPVLYAL 244 >gi|195341723|ref|XP_002037455.1| GM12094 [Drosophila sechellia] gi|194131571|gb|EDW53614.1| GM12094 [Drosophila sechellia] Length = 461 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 98/332 (29%), Positives = 165/332 (49%), Gaps = 31/332 (9%) Query: 19 ILKRICSDVEMIPDVVKYLIFSG-GKRLRPMLTLATALMLEYRGDN--HVL------LAC 69 +LK S E+ D + F G GK LRPM+T+ A + Y +N H L +A Sbjct: 131 LLKSGTSQPEL--DTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIAL 188 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS A M+ +S + Sbjct: 189 FSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 248 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 LS + L +GE QL + + YL KTA L + AL+ +++IA ++ Sbjct: 249 TIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDN 308 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT--- 246 V + YG N+G+AFQLVDD+LD+ +MGK D + G T PV+ A ++ + Sbjct: 309 VAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKMSIGY 368 Query: 247 -----KREKN---FWKSTINDGKIS---------VENLKKAFIIMRENRALVDTEYRAYS 289 R +N F + +++ ++++AF ++ ++ L T + A Sbjct: 369 ASKVASRRRNDDVFMVPAVKYPELNPMVMRRFSEPGDVERAFELVHKSHGLEQTRFLAKK 428 Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 + +A + L +S ++K L V D + R+ Sbjct: 429 HCNEAIRLAQELTESPYQKGLQVVADLVINRM 460 >gi|159905289|ref|YP_001548951.1| polyprenyl synthetase [Methanococcus maripaludis C6] gi|159886782|gb|ABX01719.1| Polyprenyl synthetase [Methanococcus maripaludis C6] Length = 317 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 154/292 (52%), Gaps = 8/292 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 K+L+ +GGKR+RP L++ T L+ + + A ++E IH TL+HDD++D+ RRG Sbjct: 30 KHLLLAGGKRVRPYLSIITYLLKKDDITEILAPALSVELIHNYTLVHDDIMDNDDQRRGM 89 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMV--IE--TKSQEALEALSLVACTLAEGELRQLSL 150 ++G ++L GD L ++AF + IE K+ E L+ LS + EG+ + Sbjct: 90 PTVHTIYGEPIAILAGDLLYAKAFEALSNIEDSNKAHEVLKVLSKACVEVCEGQTDDMEF 149 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + E Y +I KT L A +E+ +++A R+AL +Y +G+ FQ+ DD Sbjct: 150 EERFPTLYE-YFDMISKKTGALIVAPVEIGAVMADCTPEEREALCNYAKRIGMTFQIQDD 208 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 VLD G+ +GK +G D GK T+ VI A + ++ +K + + + + + +A Sbjct: 209 VLDLIGDQKTIGKPVGSDIVEGKKTMMVIYAMENLSEDKKERLLQILGNKDATADEVSEA 268 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 I+ ++ + + ++AKD L+ D+ +K+L + DF ++R++ Sbjct: 269 IAILADSIEYAKNTMKKAT--EEAKDYLKIF-DAEKRKNLESIADFIIERIH 317 >gi|76788536|ref|YP_330346.1| polyprenyl synthetase family protein [Streptococcus agalactiae A909] gi|76563593|gb|ABA46177.1| polyprenyl synthetase family protein [Streptococcus agalactiae A909] Length = 326 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 92/316 (29%), Positives = 162/316 (51%), Gaps = 9/316 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVL-- 66 K++++ N LI +RI + I + L +GGK+LRP L + L + D L Sbjct: 13 KNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGNKENQDTQQLKK 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A ++E +H ATL+HDDV+DDS LRRG + + +G +V D L + F +++E+ + Sbjct: 73 IAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTRDLLFTVFFDLILESMA 132 Query: 127 QEALEALSLVAC-TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++ + + GEL Q+ L N YL I KTA LF A + + G Sbjct: 133 DTPFMTINAKSMRKILMGELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGG 192 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + V + G N+G+ FQ++DD+LDY + K + ED G +LP++LA + Sbjct: 193 AEKEVVRLAGHIGFNIGMTFQILDDILDYTADKKTFNKPVLEDLAQGVYSLPLLLAIEEN 252 Query: 246 TKREKNFWKSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + +K ++ ++ E+++K ++ +R + + A + +KA + LP S Sbjct: 253 P----DIFKPILDKKTDMATEDMEKIAYLVVSHRGVDKARHLARKFTEKAISDINKLPQS 308 Query: 305 SWKKSLMEVVDFCLQR 320 S KK L+++ ++ L+R Sbjct: 309 SAKKQLLQLTNYLLKR 324 >gi|50549037|ref|XP_501989.1| YALI0C18755p [Yarrowia lipolytica] gi|60389562|sp|Q6CBH3|COQ1_YARLI RecName: Full=Probable hexaprenyl pyrophosphate synthase, mitochondrial; Short=HPS; Flags: Precursor gi|49647856|emb|CAG82309.1| YALI0C18755p [Yarrowia lipolytica] Length = 452 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 150/292 (51%), Gaps = 31/292 (10%) Query: 31 PDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLACAIEFIHTATLLHDDVVDDS 88 PD+V L P+ + L E G LA +E IHTA+LLHDDV+D+S Sbjct: 168 PDIV----------LNPLSRPSDPLPYESNGILPKQRRLAEIVEMIHTASLLHDDVIDNS 217 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 A RRG + +GN+ ++L GDFLL +A + ++ E +E LS L EGE QL Sbjct: 218 ATRRGSPTGNVAFGNKMAILAGDFLLGRASVAIARLRNAEVIELLSTTIANLVEGEFMQL 277 Query: 149 --SLSKNLDV----TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 ++ N ++ T E Y+H KTA L S + +++++G +N + A +G NLG Sbjct: 278 KNTIVDNSEIANKATFEYYIHKTYLKTASLMSKSCRAAAVLSGARNPIVDASYKFGKNLG 337 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR----GTKREKNFWKSTIN 258 + FQ+VDD+LDY + +GK G D + G T PV+ A+++ G ++ F Sbjct: 338 LCFQVVDDMLDYSEGESHLGKPAGADLKLGLATAPVLFAWEKYPELGDMIKRKF------ 391 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 DG VE +A ++++ L T A Y +A +L LP S +++L Sbjct: 392 DGPGDVE---RARFLVQQADGLSRTRELAQKYCDEAVANLDLLPYSESREAL 440 >gi|325281282|ref|YP_004253824.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712] gi|324313091|gb|ADY33644.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712] Length = 325 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 102/297 (34%), Positives = 153/297 (51%), Gaps = 15/297 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 +KY++ GGKRLRP+LTL + YR D L A IE H TLLHDDV+DD+ LR Sbjct: 32 IKYIMEDGGKRLRPVLTLMAYNL--YRDDIGKALKSAIGIEIFHNYTLLHDDVMDDAELR 89 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVACTLAEGELRQ 147 RG+ W + ++L GD A+ IET + ++ + VA + +G+ Sbjct: 90 RGRQTVHKKWNSNVAILSGDAAAITAY-KYIETCEDPYLRRVIDGFNQVAMDVCKGQQYD 148 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + DVTEE+Y+ +I KT+VL + ++ +LIAG + L +G LG+ FQL Sbjct: 149 MEFETRDDVTEEEYIQMIYLKTSVLIAGSMRHGALIAGAPEHEYKELYDFGGYLGLVFQL 208 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV-EN 266 DD LD G+V E GK IG D K T +I AF+ ++ +K K + K + E Sbjct: 209 QDDYLDVYGDVEEFGKKIGGDILCNKKTYLLIKAFELASEEDKALLKEWVVKEKFNPQEK 268 Query: 267 LKKAFIIMRENRALVDTEYRAY--SYGQKAKDSLRCLPDSSWKK-SLMEVVDFCLQR 320 +K+ I NR+ V RA Y +K++ +L + +K E++DF +R Sbjct: 269 IKEVTEIY--NRSGVKEALRAKVDDYLEKSRIALDKIEVPEERKVRFYEMIDFIGKR 323 >gi|239636857|ref|ZP_04677856.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus warneri L37603] gi|239597531|gb|EEQ80029.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus warneri L37603] Length = 319 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 81/232 (34%), Positives = 127/232 (54%), Gaps = 2/232 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLA 68 +++KV + + I S +++ + +L+ SGGKR+RP + ++ + G ++ +A Sbjct: 9 EIKKVEKRLEQAIHSQDKVLEEAAFHLLSSGGKRVRPAFVILSSQFGKEEGVSEDTYKVA 68 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRG++ W T+++ G+FLL+ + E K + Sbjct: 69 VALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQTTAIITGNFLLALGLQHLSEIKDKR 128 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 E LS + GEL Q N T +YL I KTA+L A EV ++ AG Sbjct: 129 VHEILSESIVDVCRGELFQFQDQFNSQQTMTNYLRRINRKTALLIQLATEVGAITAGSDI 188 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 LK G +G++FQ+VDD+LD+ ++GK +G D NG TLPV+L Sbjct: 189 KTIHKLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPVLL 240 >gi|150003776|ref|YP_001298520.1| octaprenyl-diphosphate synthase [Bacteroides vulgatus ATCC 8482] gi|254880992|ref|ZP_05253702.1| octaprenyl-diphosphate synthase [Bacteroides sp. 4_3_47FAA] gi|294777401|ref|ZP_06742852.1| polyprenyl synthetase [Bacteroides vulgatus PC510] gi|319640000|ref|ZP_07994727.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_40A] gi|149932200|gb|ABR38898.1| octaprenyl-diphosphate synthase [Bacteroides vulgatus ATCC 8482] gi|254833785|gb|EET14094.1| octaprenyl-diphosphate synthase [Bacteroides sp. 4_3_47FAA] gi|294448469|gb|EFG17018.1| polyprenyl synthetase [Bacteroides vulgatus PC510] gi|317388278|gb|EFV69130.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_40A] Length = 324 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 15/296 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 +V+ Y+ GK +RP+L L A + D+ + A ++E +HTA+L+HDDVVD+S R Sbjct: 35 EVLSYIKQRNGKMMRPILALLIAKLFGEINDSTLHAALSLELLHTASLVHDDVVDESDKR 94 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC---TLAEGELRQL 148 RG+ + ++ N+ SVLVGD++L+ + T+ + + LVAC L+EGE+ QL Sbjct: 95 RGQSSVNAIYNNKVSVLVGDYMLATSLKHSAMTRE---ITIVDLVACLGQNLSEGEIIQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + + +EE Y VI+ KTA LF+A+ E ++ + + + + +G +GIAFQ+ Sbjct: 152 ANINASEFSEEVYYDVIRKKTAALFTASAEAGAISVHASDEMVKNARLFGEMIGIAFQIK 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+ DY +E+GK G D R GK TLP + E I S E++ Sbjct: 212 DDIFDYYSS-DEIGKPTGNDMREGKLTLPALYVLNMFDDEEMRKLALRIRALDASDEDIA 270 Query: 269 KAFIIMRENRALVDTEYRAY-SYGQKAKDSLRCLPDSSW---KKSLMEVVDFCLQR 320 + FI + + ++ +A Y KA L LP S+ K +L +D+ ++R Sbjct: 271 R-FIEYTKVKGGIEYARQAMVDYRNKA---LALLPQSAGQAVKDALTAYIDYVIER 322 >gi|119964240|ref|YP_948800.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Arthrobacter aurescens TC1] gi|119951099|gb|ABM10010.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Arthrobacter aurescens TC1] Length = 367 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 155/308 (50%), Gaps = 12/308 (3%) Query: 20 LKRICSDVEMIPDVV-KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 L+ S+ + + D ++L+ +GGKR+RP+LTL A + + V A +E H AT Sbjct: 63 LREAISNSDPLADATSRHLVEAGGKRIRPLLTLLCAHLGDASRPEVVQAAVVVELTHLAT 122 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+D + RRG A VWGN ++L GD + ++A +V E S+ AL + A Sbjct: 123 LYHDDVMDSAPFRRGAPTAHEVWGNSVAILTGDLIFARASILVSELGSR----ALGIQAR 178 Query: 139 T---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 T L G+L + + + E YL VI KT L +A+ ++ ++ AG S L Sbjct: 179 TFERLCLGQLHETVGPREDEDPVEHYLSVIADKTGSLVAASGQLGAIFAGADESYEDLLV 238 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 YG +G+AFQL DDV+D G + GK+ G D R G PTLPV+L +R + Sbjct: 239 EYGEKVGVAFQLADDVIDVTGVKVKSGKSPGTDLREGVPTLPVLL-LRRDAAAGDASAIA 297 Query: 256 TIN--DGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 + DG +S E L + +RE+ ++ A + +A +L LP+ K SL Sbjct: 298 LLELVDGDLSSDEALAEVVAGLREHPVTEESWKIARQWSAEAVAALEPLPEGVVKASLTN 357 Query: 313 VVDFCLQR 320 + R Sbjct: 358 FAHAVVDR 365 >gi|195575272|ref|XP_002105603.1| GD16491 [Drosophila simulans] gi|194201530|gb|EDX15106.1| GD16491 [Drosophila simulans] Length = 461 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 98/332 (29%), Positives = 165/332 (49%), Gaps = 31/332 (9%) Query: 19 ILKRICSDVEMIPDVVKYLIFSG-GKRLRPMLTLATALMLEYRGDN--HVL------LAC 69 +LK S E+ D + F G GK LRPM+T+ A + Y +N H L +A Sbjct: 131 LLKSGTSQPEL--DTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIAL 188 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS A M+ +S + Sbjct: 189 FSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 248 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 LS + L +GE QL + + YL KTA L + AL+ +++IA ++ Sbjct: 249 TIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDN 308 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT--- 246 V + YG N+G+AFQLVDD+LD+ +MGK D + G T PV+ A ++ + Sbjct: 309 VAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKMSIGY 368 Query: 247 -----KREKN---FWKSTINDGKIS---------VENLKKAFIIMRENRALVDTEYRAYS 289 R +N F + +++ ++++AF ++ ++ L T + A Sbjct: 369 ASKVASRRRNDDVFMVPAVKYPELNPMVMRRFSEPGDVERAFELVHKSHGLEQTRFLAKK 428 Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 + +A + L +S ++K L V D + R+ Sbjct: 429 HCNEAIRLAQELTESPYQKGLQVVADLVINRM 460 >gi|305433092|ref|ZP_07402248.1| octaprenyl-diphosphate synthase [Campylobacter coli JV20] gi|304443793|gb|EFM36450.1| octaprenyl-diphosphate synthase [Campylobacter coli JV20] Length = 297 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 158/309 (51%), Gaps = 20/309 (6%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+ ++ LI K+ +++ P + GK+LR L LA A N + AI Sbjct: 1 MQPIDDLI-KQYLQELDYEPILTMLANTKSGKKLRSKLLLAIA----GENANSYKICAAI 55 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF + + + A Sbjct: 56 ELIHLASLLHDDIIDESKLRRGAKSVNAEFGTKNALMLGDILYSKAFYELSQLDACFA-S 114 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +S LA GEL + LSK+ + ++ YL +I +KTAVL A+ +++A + Sbjct: 115 IISDAVVKLAVGELMDVELSKSFNADKDKYLKMIYNKTAVLIEASARCGAILANLD---E 171 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A YG NLG+AFQ++DD+LD +G+ +GK DF+ GK TLP I ++ ++ Sbjct: 172 KAFGEYGKNLGLAFQMIDDILDIKGDEKTLGKPAMNDFKEGKTTLPYIYLYENLNNEDRA 231 Query: 252 -----FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 F K ND KI ++ E +AL A Y +A +++ + Sbjct: 232 QLKNLFQKDLNNDEKIWIQTK------FEETKALNKAILEAKEYAHQAALAIKDFSNEKL 285 Query: 307 KKSLMEVVD 315 + + ++D Sbjct: 286 QDIIQAMID 294 >gi|256380651|ref|YP_003104311.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827] gi|255924954|gb|ACU40465.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827] Length = 333 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 154/321 (47%), Gaps = 7/321 (2%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYR 60 +L ++ +++V ++ + + S+ + + +L+ +GGKR+RP+ T LA + Sbjct: 16 PVLAEVVQSGLDEVEGILREVVRSEFNPVMETSLHLVEAGGKRIRPLFTILAAQFGPSWD 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 ++ V A +E H ATL HDDV+D++ +RRG +A W N ++L GD+L + A + Sbjct: 76 RESVVKAAAVVELTHLATLYHDDVMDEATMRRGAASANAKWNNSIAILTGDYLFAHASTL 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + + EA +S L G++R+ + + E YL I KT L + A Sbjct: 136 VADLGT-EAARTISRTFGELVTGQMRETMGPREGEDPVEHYLTTIAEKTGSLIATAARFG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + AL++YG +G AFQ+ DDV+D E GK G D R G TLP++ Sbjct: 195 GMFSDATEEQVAALQAYGDVIGSAFQISDDVIDIASPPEESGKTPGTDLREGVKTLPMLY 254 Query: 241 AFQ-RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q R + I D +E L+ ++R + L Y +A+ L Sbjct: 255 ALQDEPDSRLARLLAAPIEDDAEVLEALE----LLRASSGLQRARKTLDEYADRARSCLA 310 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP+ + +L V ++ + R Sbjct: 311 VLPEGRARDALESVSEYVVSR 331 >gi|293376156|ref|ZP_06622402.1| polyprenyl synthetase [Turicibacter sanguinis PC909] gi|325845300|ref|ZP_08168603.1| putative heptaprenyl pyrophosphate synthase component 2 [Turicibacter sp. HGF1] gi|292645229|gb|EFF63293.1| polyprenyl synthetase [Turicibacter sanguinis PC909] gi|325488661|gb|EGC91067.1| putative heptaprenyl pyrophosphate synthase component 2 [Turicibacter sp. HGF1] Length = 321 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 89/312 (28%), Positives = 156/312 (50%), Gaps = 10/312 (3%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +E+VN +I +++ + +++K L SGGK++RP L + + + L+ + Sbjct: 15 LEQVNHIINQQLTVKQSKMNEILKDLAQSGGKKIRPGLCIIGGEFGDKDIKHLYHLSAVL 74 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H ATL+HDD++DDS RRG++ + +G +V GD++ ++ F ++ E ++ Sbjct: 75 EMLHMATLVHDDIIDDSVQRRGQLTTQQKYGKDYAVYTGDYIFTKCFEILAEHYELHHMK 134 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS + GE+ Q + + YL VI +KT+ L + +L V + +G Sbjct: 135 ELSKTVSRVCMGEIDQFDGRFKSHTSVKKYLKVIGAKTSALLAVSLSVGAYESGCDEKFC 194 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + L G+++G AFQ++DD+LDY G+ + +GK +G D R G TLP++ A + R Sbjct: 195 KKLGKIGLHIGNAFQIIDDILDYVGDASRVGKTLGNDIRQGYYTLPLLYALKHNDDRLNE 254 Query: 252 FWKS-TINDGKISVENLKKAFIIMRENR--ALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 S T D +S II R N + + A+ Y K+ ++ LP + Sbjct: 255 LLASETYTDEVVSR-------IIERVNELGGVKQAQELAHKYTVKSLKEIKSLPAGQARD 307 Query: 309 SLMEVVDFCLQR 320 L V + L R Sbjct: 308 HLEWVTNQLLAR 319 >gi|28572234|ref|NP_789014.1| polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27] gi|28410365|emb|CAD66751.1| putative polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27] Length = 338 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 89/301 (29%), Positives = 158/301 (52%), Gaps = 18/301 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++V +L+ SGGKR RP+L L T+ M D + A IE IH +L HDDV+D++ +R Sbjct: 42 EIVSHLLVSGGKRARPLLVLLTSCMGSGINDAVIRAAAGIELIHLGSLYHDDVMDNAYIR 101 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-LSL 150 G + A +WG ++L GDFL ++A + + + A+ + + G+L + L + Sbjct: 102 HGSITAHRLWGKSAAILAGDFLFAKAGVLGLNLD-KRAIAVQTEAFQRMISGQLSETLGI 160 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 S +LD E Y+ V + KT L +A+ +V +++ S + L+ +G ++G+AFQLVDD Sbjct: 161 SDSLDPLEA-YIEVSRGKTGSLIAASAQVGAILGDASLSTLEPLRDFGESIGVAFQLVDD 219 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN-------FWKSTINDGKIS 263 V+D G + GK G D R G +LP++L K +++ + + G Sbjct: 220 VIDLSG---KSGKTPGSDIRAGVMSLPILL-LSNAAKDDRDSAVLLEEIERVRRHSGACG 275 Query: 264 VEN----LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 ++ + +R++ T A ++G KAK +L+ LP+ + + +L+ V+ + Sbjct: 276 SDDYSSEMNAVLAHLRKHDVTARTLEIARTWGDKAKHALKKLPECAPRDALLAFVETVVS 335 Query: 320 R 320 R Sbjct: 336 R 336 >gi|261193789|ref|XP_002623300.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis SLH14081] gi|239588905|gb|EEQ71548.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis SLH14081] Length = 520 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 91/254 (35%), Positives = 134/254 (52%), Gaps = 12/254 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A + + Sbjct: 263 LAEITELIHTASLLHDDVIDNAVTRRSAVSANLEFGNKMAVLAGDFLLGRASVALARLRD 322 Query: 127 QEALEALSLVACTLAEGELRQLSLSK----NLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E LS V L EGE QL ++ N TE+ YL K+A L S + Sbjct: 323 PEVIELLSTVIANLIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLISKSCRA 382 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ + +A SYG NLG+AFQLVDD+LDY E+GK G D G T P++ Sbjct: 383 AALLGHSSPQIVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLATAPLL 442 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ + + +G + + A I+ ++ L T A Y KA +++ Sbjct: 443 FAWRGNPELGALVGRKFSGEGDVQL-----ARQIVAQSDGLEQTRALAQEYTDKAIEAIS 497 Query: 300 CLPDSSWKKSLMEV 313 LPD+ K L+E+ Sbjct: 498 ILPDTEAKAGLVEM 511 >gi|288802129|ref|ZP_06407570.1| polyprenyl synthetase [Prevotella melaninogenica D18] gi|302346894|ref|YP_003815192.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845] gi|288335564|gb|EFC73998.1| polyprenyl synthetase [Prevotella melaninogenica D18] gi|302150740|gb|ADK97001.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845] Length = 324 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 124/221 (56%), Gaps = 7/221 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 +KY++ GGKR+RP L L + + ++ D +L ACA+E H TLLHDD++DD+ LR Sbjct: 31 IKYVLSLGGKRIRPTLMLLSYNL--FKDDPETILSPACALETYHNYTLLHDDLMDDAPLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQL 148 RG+ + W T++L GD +L AF + + S+ E L ++ A + EG+ + Sbjct: 89 RGQQTVHVRWDANTAILSGDSMLVLAFERMAQCDSRHLSEVLRLFTVTALEIGEGQQYDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DV EE+Y+ +I+ KT+VL + A+++ +++A + L +G +G+AFQL Sbjct: 149 EFENRNDVKEEEYIEMIRLKTSVLLACAMKIGAILADAPAEDVENLYKFGEQIGLAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 DD LD G+ GK IG D K T +I AF + R+ Sbjct: 209 DDYLDVYGDPKVFGKKIGGDIICNKKTYMLINAFNKANARQ 249 >gi|56963654|ref|YP_175385.1| heptaprenyl diphosphate synthase component II [Bacillus clausii KSM-K16] gi|56909897|dbj|BAD64424.1| heptaprenyl diphosphate synthase component II [Bacillus clausii KSM-K16] Length = 323 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 84/287 (29%), Positives = 146/287 (50%), Gaps = 7/287 (2%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 L+ +GGKR+RP+L L +Y+ D +A +E IH +L+HDDV+D++ LRRG+ Sbjct: 39 LLKAGGKRIRPVLVLLAGKFGDYQLDRLKHIAVTLELIHMGSLVHDDVIDNAPLRRGRET 98 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 W N+ ++ GD++ A + +S V + GE+ Q+ N D Sbjct: 99 VMSRWDNRVAMYTGDYIFGHAIETTKAFSDKRVHTIISDVMNQICRGEIEQIRDQYNWDQ 158 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 YL IK KTA+L + + ++ ++++G + +++ L + LG+++Q++DD+LD+ G Sbjct: 159 GLRIYLRRIKRKTALLIAVSCQLGAIVSGATDELQKNLYYFAYFLGMSYQIMDDILDFVG 218 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 ++GK G D R G TLP + A + ++ KS + + ++ ++ E Sbjct: 219 TNEQLGKPAGGDLRQGNVTLPALYAIEHTPGFKQRLEKSLTKESSLEMDMEP----LLNE 274 Query: 277 NRALVDTEY-RAYS--YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 R EY +A S Y KA L PD K+ L+EV + +R Sbjct: 275 VRTSGGIEYAQAMSDRYLHKANTLLMGFPDIDAKRHLIEVASYIGRR 321 >gi|45357608|ref|NP_987165.1| bifunctional short chain isoprenyl diphosphate synthase [Methanococcus maripaludis S2] gi|45047168|emb|CAF29601.1| bifunctional short chain isoprenyl diphosphate synthase [Methanococcus maripaludis S2] Length = 317 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 89/293 (30%), Positives = 157/293 (53%), Gaps = 10/293 (3%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 K+L+ +GGKR+RP L++ T L+ + + A ++E IH TL+HDD++D+ RRG Sbjct: 30 KHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHNYTLVHDDIMDNDDQRRGI 89 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMV--IE--TKSQEALEALSLVACTLAEGELRQLSL 150 V+G ++L GD L ++AF + IE K+ E L+ LS + EG+ + Sbjct: 90 PTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHEVLKVLSKACVEVCEGQTEDMEF 149 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + +E YL +I KT L A +E+ +++A R+AL +Y +G+ FQ+ DD Sbjct: 150 EERFPTLDE-YLEMISKKTGALIVAPVEIGAVMADCTPEEREALCNYAKRIGMTFQIQDD 208 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 VLD G+ +GK +G D GK T+ VI A + ++ +K + + + + + +A Sbjct: 209 VLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSEDKKERLLQILGNQDANQQEVAEA 268 Query: 271 FIIMRENRALV-DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 ++ ++ DT A ++AKD L+ D+ +K+L + DF ++R++ Sbjct: 269 IELLADSINYAKDTMKNA---TEEAKDYLKIF-DAEKRKNLENIADFIIERIH 317 >gi|239613774|gb|EEQ90761.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis ER-3] gi|327350044|gb|EGE78901.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis ATCC 18188] Length = 520 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 91/254 (35%), Positives = 134/254 (52%), Gaps = 12/254 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A + + Sbjct: 263 LAEITELIHTASLLHDDVIDNAVTRRSAVSANLEFGNKMAVLAGDFLLGRASVALARLRD 322 Query: 127 QEALEALSLVACTLAEGELRQLSLSK----NLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E LS V L EGE QL ++ N TE+ YL K+A L S + Sbjct: 323 PEVIELLSTVIANLIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLISKSCRA 382 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ + +A SYG NLG+AFQLVDD+LDY E+GK G D G T P++ Sbjct: 383 AALLGHSSPQIVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLATAPLL 442 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ + + +G + + A I+ ++ L T A Y KA +++ Sbjct: 443 FAWRGNPELGALVGRKFSGEGDVQL-----ARQIVAQSDGLEQTRALAQEYTDKAIEAIS 497 Query: 300 CLPDSSWKKSLMEV 313 LPD+ K L+E+ Sbjct: 498 ILPDTEAKAGLVEM 511 >gi|78184893|ref|YP_377328.1| trans-hexaprenyltranstransferase [Synechococcus sp. CC9902] gi|78169187|gb|ABB26284.1| Trans-hexaprenyltranstransferase [Synechococcus sp. CC9902] Length = 323 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 91/293 (31%), Positives = 153/293 (52%), Gaps = 10/293 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKR+RP + L + L G+ H LA E IHTA+L+HDDVVD+++ Sbjct: 36 AAEHLFSAGGKRIRPGIVLLISRALAADGELTPRHRRLAEITEMIHTASLVHDDVVDEAS 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + + +VL GDFL +QA + + ++ LS V LA+GE++Q Sbjct: 96 TRRGVDTVHSRFDARVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E Y KTA L + + + +++ +L +G LG+AFQ+VD Sbjct: 156 YRFDTSQSFETYFEKSYCKTASLIANSSRAAGVLSECNPQELDSLYQFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS-VENLK 268 D+LD+ G ++GK D G T P A E+N + D + S +L+ Sbjct: 216 DILDFTGSDQQLGKPAASDLATGYLTAPTFYAL------EENPELGALIDREFSEAGDLE 269 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +A ++R ++A+ T A + +++++S+ + DS K++L+E+ DF L RL Sbjct: 270 QALELVRSSQAIPRTRELAEKFARESRESIAWMADSPSKRALLELPDFVLSRL 322 >gi|325282325|ref|YP_004254866.1| Geranyltranstransferase [Deinococcus proteolyticus MRP] gi|324314134|gb|ADY25249.1| Geranyltranstransferase [Deinococcus proteolyticus MRP] Length = 343 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 89/224 (39%), Positives = 131/224 (58%), Gaps = 9/224 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-----EYRGDNH---VLLACAIEFIHT 76 S+VE I + + L+ +GGKRLRP++TL +A L E G +H + LA IE +H+ Sbjct: 41 SEVEFIELIGEDLVAAGGKRLRPLVTLLSAQALQVGAPEDAGGHHGDALALAICIELLHS 100 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSL 135 A+LLHDD++DD+ RRG+ AA +GN SV+ GDF+L++ ++ E + L A Sbjct: 101 ASLLHDDLIDDADTRRGQEAAFRRYGNVVSVMSGDFMLARLLMLLSELPAAARLTRAFGE 160 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 VA + EGE+ Q ++ + T E Y +I KTA L A +L+ G + QAL+ Sbjct: 161 VASVICEGEVLQFQVAAYGNPTPEQYSRIIYGKTAALLELAAAAPALLLGASAAQEQALR 220 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 YG LG+AFQ+ DD+LD G ++GK +G D R GK T V+ Sbjct: 221 QYGRELGMAFQIRDDLLDLLGREEDLGKPVGSDLREGKATFAVL 264 >gi|256370650|ref|YP_003108475.1| putative polyprenyl synthetase [Candidatus Sulcia muelleri SMDSEM] gi|256009442|gb|ACU52802.1| putative polyprenyl synthetase [Candidatus Sulcia muelleri SMDSEM] Length = 317 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 90/306 (29%), Positives = 152/306 (49%), Gaps = 24/306 (7%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S + + + Y GK +RP+L ML LA IE IHTA+++HDDV Sbjct: 24 SKILFLKKIKNYFFLKKGKYVRPLLIFLITKMLGTISKKTYKLASIIELIHTASIIHDDV 83 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D+S+ RRG + +W N+ +V+ GD++ S++ + + S S + ++EGE Sbjct: 84 IDNSSFRRGFLTINSLWNNKIAVIFGDYIFSKSLNLALNHNSNHYNNLFSNLILKMSEGE 143 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L Q+ KN +E++Y +I +KTA+L S E S + ++++ LK G+ +G++ Sbjct: 144 LYQIDFIKNHKFSEKNYKKIIFNKTALLISTCCEQSGKLLQKKHTLF-FLKKIGILIGLS 202 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD+LDY N +N+ K TLP I +F + + +EK W +++ Sbjct: 203 FQIKDDLLDYN---NFNQQNLFLKLNETKITLPFIYSFNKASFKEKK-W-------ILNL 251 Query: 265 ENLKKAFIIMRENRALVD-------TEYRAYS---YGQKAKDSLRCLPDSSWKKSLMEVV 314 N KK F + L++ E+ Y + KA L P++S KSL ++ Sbjct: 252 SNNKKNFFCFY--KKLINFIFFLGGIEFSIYKMKLFTNKALIQLNNFPNNSANKSLKTLI 309 Query: 315 DFCLQR 320 F + R Sbjct: 310 FFFINR 315 >gi|148544308|ref|YP_001271678.1| polyprenyl synthetase [Lactobacillus reuteri DSM 20016] gi|184153686|ref|YP_001842027.1| polyprenyl synthase [Lactobacillus reuteri JCM 1112] gi|227365030|ref|ZP_03849068.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri MM2-3] gi|325681657|ref|ZP_08161177.1| polyprenyl synthetase [Lactobacillus reuteri MM4-1A] gi|148531342|gb|ABQ83341.1| Polyprenyl synthetase [Lactobacillus reuteri DSM 20016] gi|183225030|dbj|BAG25547.1| polyprenyl synthase [Lactobacillus reuteri JCM 1112] gi|227069942|gb|EEI08327.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri MM2-3] gi|324978969|gb|EGC15916.1| polyprenyl synthetase [Lactobacillus reuteri MM4-1A] Length = 326 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 12/315 (3%) Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLACA 70 KVN I RI + D ++ + +GGK LRP L A + D + +A + Sbjct: 18 KVNQTINDRITIKNTQLHDALQQMASNGGKYLRPAFFLLFANINHQTADEQEKLIKIASS 77 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H ATL+HDD++DDS RRG V+ + +G T+V GDFL + F +++ET + A Sbjct: 78 LEVLHMATLIHDDIIDDSPKRRGAVSVQAAFGKDTAVYTGDFLFTIFFDLLVETMTGSAY 137 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L+ A T+ + GEL Q+ +LD + DY + KTA +FS A E + Sbjct: 138 --LTRNARTMRKILTGELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLAAEEGAYFGHAD 195 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + K G N+GI+FQ++DD+LDY G+ + K + ED G +LP++L Q Sbjct: 196 HRTINLAKRIGQNIGISFQILDDILDYSGD-ERLNKPVLEDLATGVYSLPLLLTLQ---N 251 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++++E+++K I+ + + + A + QKA+ + L D + Sbjct: 252 HRHELEPLLAKKRQMTIEDIEKVQKIVVTHGGVEQAQEIATKFTQKAQTEIDELADKHTR 311 Query: 308 KSLMEVVDFCLQRLN 322 K L V + L R+N Sbjct: 312 KMLKLVANKLLTRVN 326 >gi|300726785|ref|ZP_07060215.1| polyprenyl synthetase [Prevotella bryantii B14] gi|299775898|gb|EFI72478.1| polyprenyl synthetase [Prevotella bryantii B14] Length = 324 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 124/219 (56%), Gaps = 3/219 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP L L + + ++ ++ ACA+E H TLLHDD++D + LRRG Sbjct: 31 IRYVLSIGGKRIRPTLMLLAYNLFKEDPESILMSACALETYHNYTLLHDDLMDQADLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQLSL 150 K W T++L GD +L A+ ++ K + + L+ + A + EG+ + Sbjct: 91 KETVHKKWNANTAILSGDSMLVLAYQRMLNCKPEYQGKVLKLFTETALEIGEGQQYDMEF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 +DV EE+Y+ +I+ KT+VL + A+++ +++A + L +G +G+AFQL DD Sbjct: 151 ETRMDVVEEEYIEMIRLKTSVLLACAMKIGAILADASDEDADNLYKFGEQIGLAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 LD G+ GK++G D + K T +I AF + R+ Sbjct: 211 YLDVYGDPKVFGKSVGGDIVSNKKTYMLINAFHKADNRQ 249 >gi|126433376|ref|YP_001069067.1| trans-hexaprenyltranstransferase [Mycobacterium sp. JLS] gi|126233176|gb|ABN96576.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. JLS] Length = 325 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 95/301 (31%), Positives = 163/301 (54%), Gaps = 17/301 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVD 86 E++ + V++L +GGKR RP+ T+ +A + V +A A IE +H ATL HDDV+D Sbjct: 32 ELMAEAVQHLFQAGGKRFRPLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDVMD 91 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---G 143 ++ +RRG +A WGN ++L GD+L + A +V S+ EA+ ++A T A+ G Sbjct: 92 EAQVRRGAPSANARWGNNIAILAGDYLFATASRLV----SRLGPEAVRIIADTFAQLVTG 147 Query: 144 ELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 ++R+ + + +D E YL V+ KTA L +A+ + +G + + L G +G Sbjct: 148 QMRETRGAVEGVDEIEH-YLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVG 206 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG---TKREKNFWKSTIND 259 AFQ+ DD++D + +E GK G D R G TLPV+ A + T R + +++ Sbjct: 207 TAFQISDDIIDIDSDPDESGKVPGTDLREGVHTLPVLYALRESGPDTDRLRELLARPVDN 266 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 ++L +A ++R + + + Y Q+A+D L LPD +++L +VD+ + Sbjct: 267 D----DDLAEALRLLRRSPGMEQAKATVARYAQQARDELAALPDMPGRQALASLVDYTIT 322 Query: 320 R 320 R Sbjct: 323 R 323 >gi|290892090|ref|ZP_06555086.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL J2-071] gi|290558213|gb|EFD91731.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL J2-071] Length = 321 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 101/283 (35%), Positives = 151/283 (53%), Gaps = 12/283 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLLHDDVVDDSALRRGK 94 +L+ +GGKR+RPM +A + + V A AIE IH A+++HDDVVDD+ LRRG+ Sbjct: 39 HLLEAGGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDVVDDADLRRGR 98 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 + WGN ++ GDFL +++ + E K A + LS V L+ GE+ QL N Sbjct: 99 ETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNF 158 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 D + +YL IK KTA+L +A+ + +++G + Q L +G +G+AFQ+ DDVLD+ Sbjct: 159 DQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQITDDVLDF 218 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274 G E+GK GED R G TLPV A E F K I+ +++ E + ++ Sbjct: 219 VGTEKELGKPAGEDLRQGNVTLPVFFAM------EDPFLKKRIS--QVTEETPAEEIAVL 270 Query: 275 RE---NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 E E A +Y +KA + L LP K L ++V Sbjct: 271 VEEVKKAGAKPAEDIATAYLKKAVEILDSLPQVPELKPLKQIV 313 >gi|288928474|ref|ZP_06422321.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108] gi|288331308|gb|EFC69892.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108] Length = 324 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 83/253 (32%), Positives = 135/253 (53%), Gaps = 15/253 (5%) Query: 18 LILKRICSDVEMIP---------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 LIL +I + +E +P + ++Y++ GGKR+RP L L + + ++ + A Sbjct: 6 LILSKINAYLEALPFNRKPQSLYEPIRYVLSIGGKRIRPALALLAYNLFKDDPESILAPA 65 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TK 125 C +E H TLLHDD++D++ALRRGK W T++L GD +L A+ +V + K Sbjct: 66 CGLETYHNYTLLHDDLMDNAALRRGKPTVHKRWDANTAILSGDSMLVLAYQLVAQCDAAK 125 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + +E + A + EG+ + DVTE++Y+ +I+ KT+VL + A+++ +L+A Sbjct: 126 LKPVMELFTETALEIGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACAMKMGALLAD 185 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR- 244 L +G +G+AFQL DD LD G+ GK IG D + K T +I AF + Sbjct: 186 APQRDADLLYKFGEQIGLAFQLQDDFLDVYGDSKVFGKAIGGDIVSNKKTYMLINAFNKA 245 Query: 245 --GTKREKNFWKS 255 + E W S Sbjct: 246 DAAQRAELQHWVS 258 >gi|326335315|ref|ZP_08201510.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692586|gb|EGD34530.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 323 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 83/256 (32%), Positives = 135/256 (52%), Gaps = 8/256 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D + Y++ GGKRLRP LT+ +A + + A A+E H +L+HDD++D+++LR Sbjct: 29 DPIHYILNVGGKRLRPTLTMLSANIFGEDYHKALYAALAVEIFHNFSLVHDDIMDEASLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQL 148 RG+ W T +L GD +L A+ + + QE + S A + EG+ + Sbjct: 89 RGQPTVHTKWNLNTGILSGDTMLILAYQYFEQYEPNIFQELAKIFSKTAIEVCEGQQYDV 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 K + V+ + YL +I KTAVL AAL++ ++IA +Q + +G+ LGIA+QL Sbjct: 149 DFEKEVQVSTDQYLKMIAYKTAVLIGAALKMGAIIAQTTEENKQQIYDFGLALGIAYQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN----FWKSTINDGKISV 264 DD LD G+V+ GK IG D K TL + A ++GT +K + + D + Sbjct: 209 DDYLDTFGDVS-FGKKIGGDILQNKKTLLYLKALEKGTPVQKQELYTLYTTQPKDEAEKI 267 Query: 265 ENLKKAFIIMRENRAL 280 + + F+I + + L Sbjct: 268 TRVTELFVITQSHTYL 283 >gi|86140814|ref|ZP_01059373.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella blandensis MED217] gi|85832756|gb|EAQ51205.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella blandensis MED217] Length = 324 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 145/295 (49%), Gaps = 12/295 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y++ GGKRLRP+LTL + E + A A+E H +L+HDD++DD+ LRRG Sbjct: 31 IHYILQLGGKRLRPVLTLMATDIFESDHQKALDAALAVEVFHNFSLVHDDIMDDAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----SLVACTLAEGELRQLS 149 + W T +L GD +L +A+ + E E AL S A + EG+ + Sbjct: 91 EETVHEKWDVNTGILSGDAMLIRAY-QLFENYEGETFRALAKLFSKTAIEVCEGQQYDVD 149 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 DVT +YL +I+ KTAVL AAL++ +++A + YG +LGIAFQL D Sbjct: 150 FETRDDVTIPEYLKMIEYKTAVLVGAALKMGAIVANASAENANRIYEYGRDLGIAFQLQD 209 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR----GTKREKNFWKSTINDGKISVE 265 D LD G+ GK +G D K T + A +R +K+ ++ + D +E Sbjct: 210 DYLDAFGDPKTFGKQVGGDIIENKKTFLYLTALERLDEVHSKQLQHLFSINPQDPSEKIE 269 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +K+ FI ++ A T+ Y A + L CL K++++ L R Sbjct: 270 TVKQLFI---DSGAAEATQQEIEKYTNTALEHLDCLDVKEENKTILKEFAQALMR 321 >gi|21227869|ref|NP_633791.1| dimethylallyltransferase [Methanosarcina mazei Go1] gi|20906283|gb|AAM31463.1| Dimethylallyltransferase [Methanosarcina mazei Go1] Length = 324 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 160/294 (54%), Gaps = 17/294 (5%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDN--HVL-LACAIEFIHTATLLHDDVVDDSALR 91 +YL+ +GGKRLRP + + A E G N VL A A+E +H TL+HDD++D +R Sbjct: 38 RYLVDAGGKRLRPAVLILAA---EAVGSNLRSVLPAAVAVELVHNFTLIHDDIMDRDDIR 94 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVACTLAEGELR 146 RG A + WG ++L GD L S+AF ++ + +++ + ++ LS + EG+ Sbjct: 95 RGMPAVHVKWGEAGAILAGDTLYSKAFEILSKVENEPVRVLKCMDVLSKTCTEICEGQWL 154 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + VTE +YL +++ KT+VL++AA ++ +L+ G + V +AL YG +GI FQ Sbjct: 155 DMDFETRKKVTESEYLEMVEKKTSVLYAAAAKIGALLGGASDEVAEALSEYGRLIGIGFQ 214 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 + DDVLD +GK G D GK TL VI AF++G K + G+ ++E Sbjct: 215 MYDDVLDMTAPEEVLGKVRGSDLMEGKYTLIVINAFEKGVKLD------IFGKGEATLEE 268 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + A + E +L + A SY ++ K+ L L D K L+++ D+ + R Sbjct: 269 TEAAVRTLTECGSLDYVKNLAISYIEEGKEKLDVLRDCPEKTLLLQIADYMISR 322 >gi|333029215|ref|ZP_08457276.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011] gi|332739812|gb|EGJ70294.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011] Length = 324 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 154/293 (52%), Gaps = 8/293 (2%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D + + + + Y++ GGKR+RP+L L + + + + ACAIE H TLLHDD++ Sbjct: 23 DPKNLYEPIHYVLSIGGKRIRPILMLLAYQLYKDDLEKTLPAACAIEVYHNFTLLHDDLM 82 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----SLVACTLA 141 D S LRR K VW T++L GD +L ++ ++ + QE L A+ + V + Sbjct: 83 DKSDLRRNKPTVHNVWNANTAILSGDAMLILSYHLLAKA-PQENLSAVLNEFNKVTLEIC 141 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 EG+ + V EDYL +I+ KTAVL ++++++ ++IAG + L +G+N+ Sbjct: 142 EGQQYDIEFETKNSVKAEDYLDMIRLKTAVLLASSIKMGAIIAGASDEDTNLLYDFGLNV 201 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G+AFQL DD LD G+ GK G+D + K T +I A R T + K + I+ + Sbjct: 202 GLAFQLQDDYLDVYGDPKVFGKQTGDDIVSNKKTYMLIQACNRATGKVKEDLEIWIDTKE 261 Query: 262 ISVENLKKAFIIMRENRALVDT--EYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 + E KA I N +D + + Y KA +SL + S KK L++ Sbjct: 262 FNSEKKIKA-ITEIYNELGIDEICKQKMNEYYDKALNSLSLVSVSDDKKKLLQ 313 >gi|108797750|ref|YP_637947.1| trans-hexaprenyltranstransferase [Mycobacterium sp. MCS] gi|108768169|gb|ABG06891.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. MCS] Length = 335 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 95/301 (31%), Positives = 163/301 (54%), Gaps = 17/301 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVD 86 E++ + V++L +GGKR RP+ T+ +A + V +A A IE +H ATL HDDV+D Sbjct: 42 ELMAEAVQHLFQAGGKRFRPLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDVMD 101 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---G 143 ++ +RRG +A WGN ++L GD+L + A +V S+ EA+ ++A T A+ G Sbjct: 102 EAQVRRGAPSANARWGNNIAILAGDYLFATASRLV----SRLGPEAVRIIADTFAQLVTG 157 Query: 144 ELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 ++R+ + + +D E YL V+ KTA L +A+ + +G + + L G +G Sbjct: 158 QMRETRGAVEGVDEIEH-YLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVG 216 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG---TKREKNFWKSTIND 259 AFQ+ DD++D + +E GK G D R G TLPV+ A + T R + +++ Sbjct: 217 TAFQISDDIIDIDSDPDESGKVPGTDLREGVHTLPVLYALRESGPDTDRLRELLARPVDN 276 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 ++L +A ++R + + + Y Q+A+D L LPD +++L +VD+ + Sbjct: 277 D----DDLAEALRLLRRSPGMEQAKATVARYAQQARDELAALPDMPGRQALASLVDYTIT 332 Query: 320 R 320 R Sbjct: 333 R 333 >gi|313607945|gb|EFR84079.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes FSL F2-208] Length = 324 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 108/314 (34%), Positives = 165/314 (52%), Gaps = 16/314 (5%) Query: 10 KDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 KD++ V + K + + E D +L+ +GGKR+RPM +A + + V A Sbjct: 15 KDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPNADFDAVKNA 74 Query: 69 C-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++ + E K Sbjct: 75 SVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDV 134 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G Sbjct: 135 AAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQS 194 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV A Sbjct: 195 EADYQKLFRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAM----- 249 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRE---NRALVDTEYRAYSYGQKAK---DSLRCL 301 E F K I+ +++ E + ++ E E A +Y +KA DSL + Sbjct: 250 -EDPFLKKRIS--QVTEETPAEEIAVLVEEVKKTGAKQAEDIATAYLKKAVEILDSLPQV 306 Query: 302 PDSSWKKSLMEVVD 315 P+ K ++ V+D Sbjct: 307 PELKPLKQIVRVLD 320 >gi|302807465|ref|XP_002985427.1| hypothetical protein SELMODRAFT_446259 [Selaginella moellendorffii] gi|300146890|gb|EFJ13557.1| hypothetical protein SELMODRAFT_446259 [Selaginella moellendorffii] Length = 415 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 92/290 (31%), Positives = 159/290 (54%), Gaps = 15/290 (5%) Query: 40 SGGKRLRPMLT--LATALMLEYRGD----NHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +GGKR+RP + ++ A M R + H LA E IHTA+L+HDDV+D+S +RRG Sbjct: 132 AGGKRMRPAIVFLVSRATMQLARLNTIHLQHRRLAEITEMIHTASLIHDDVLDESDVRRG 191 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K ++G + +VL GDF+ +Q+ + + E ++ +S V A GE++Q S + Sbjct: 192 KETVHQLYGTRIAVLAGDFMFAQSSWYLANLDNLEVIKLISQVIKDFASGEIQQASSLFD 251 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 ++T ++YL KTA L +A+ +++ +G SV + YG LG+AFQ+VDD+LD Sbjct: 252 SEITLDNYLDKSYYKTASLIAASTRSAAIFSGADPSVCDKMFDYGKYLGLAFQIVDDILD 311 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI--SVENLKKAF 271 + ++GK G D G T P + A + + K ++G + +V+ +K+ Sbjct: 312 FTQSTAQLGKPAGSDLAKGNLTAPALFALDKEPELRKLIDSEFTDEGSLESAVQLVKRGG 371 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 I +RA+ + +A + A +L CLP + + SL ++V++ L+R+ Sbjct: 372 GI---DRAMELAKQKA----ELAIQALECLPVGAARSSLEKMVEYVLERV 414 >gi|224498620|ref|ZP_03666969.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes Finland 1988] Length = 274 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 90/236 (38%), Positives = 134/236 (56%), Gaps = 2/236 (0%) Query: 10 KDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 KD++ V + K + + E D +L+ +GGKR+RPM +A + + V A Sbjct: 15 KDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPNADFDAVKNA 74 Query: 69 C-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++ + E K Sbjct: 75 SVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDV 134 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G Sbjct: 135 AAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQS 194 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV A + Sbjct: 195 EADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAME 250 >gi|284047359|ref|YP_003397699.1| trans-hexaprenyltranstransferase [Conexibacter woesei DSM 14684] gi|283951580|gb|ADB54324.1| Trans-hexaprenyltranstransferase [Conexibacter woesei DSM 14684] Length = 323 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 93/291 (31%), Positives = 145/291 (49%), Gaps = 8/291 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 ME+V + + +++ + I +GGKRLRP+L L A D + A A+ Sbjct: 22 MERVEQRLTELTAGHGQLLAEHAGTTIAAGGKRLRPLLVLLAAGESAAPTDRLIRSAVAV 81 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IH+A+L+HDDV+D + +RRG+ G + GD L S+AF + + + Sbjct: 82 ELIHSASLVHDDVLDRAPVRRGRPTVFAAAGRTVATATGDLLFSRAFAELAASGEAADVR 141 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 ALS + LA GEL Q + + ++ V+ + YL + KT LF AA + +L + Sbjct: 142 ALSGASSALAAGELMQRADAWDVGVSLDRYLERCELKTGALFEAACRLGALATAGPD--- 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +AL ++G +G+AFQL+DDVLD G + GK G D +G TLP+I+A +R Sbjct: 199 EALAAFGRRIGLAFQLLDDVLDVSGPASRTGKARGTDLLDGTVTLPLIIARER-----DP 253 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 +T + E + + AL D + RA + +AK L LP Sbjct: 254 ALAATDLRALATAEQAESICDRIAATGALSDAKERALAVVAEAKAGLPALP 304 >gi|119866839|ref|YP_936791.1| trans-hexaprenyltranstransferase [Mycobacterium sp. KMS] gi|119692928|gb|ABL90001.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. KMS] Length = 342 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 95/301 (31%), Positives = 163/301 (54%), Gaps = 17/301 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVD 86 E++ + V++L +GGKR RP+ T+ +A + V +A A IE +H ATL HDDV+D Sbjct: 49 ELMAEAVQHLFQAGGKRFRPLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDVMD 108 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---G 143 ++ +RRG +A WGN ++L GD+L + A +V S+ EA+ ++A T A+ G Sbjct: 109 EAQVRRGAPSANARWGNNIAILAGDYLFATASRLV----SRLGPEAVRIIADTFAQLVTG 164 Query: 144 ELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 ++R+ + + +D E YL V+ KTA L +A+ + +G + + L G +G Sbjct: 165 QMRETRGAVEGVDEIEH-YLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVG 223 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG---TKREKNFWKSTIND 259 AFQ+ DD++D + +E GK G D R G TLPV+ A + T R + +++ Sbjct: 224 TAFQISDDIIDIDSDPDESGKVPGTDLREGVHTLPVLYALRESGPDTDRLRELLARPVDN 283 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 ++L +A ++R + + + Y Q+A+D L LPD +++L +VD+ + Sbjct: 284 D----DDLAEALRLLRRSPGMEQAKATVARYAQQARDELAALPDMPGRQALASLVDYTIT 339 Query: 320 R 320 R Sbjct: 340 R 340 >gi|315028641|gb|EFT40573.1| polyprenyl synthetase [Enterococcus faecalis TX4000] Length = 305 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 158/307 (51%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 8 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 63 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 64 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 121 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 122 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 182 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREI-LLPLLM 238 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + T+ A Y +KA + LP++ K+ L E+ Sbjct: 239 KKEALTDEETQEIYRLVHELGGVEKTQELATHYTEKALKEISKLPETKAQAKEQLYEITQ 298 Query: 316 FCLQRLN 322 L R N Sbjct: 299 TILTREN 305 >gi|317475481|ref|ZP_07934744.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA] gi|316908312|gb|EFV30003.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 324 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 122/223 (54%), Gaps = 7/223 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D V Y++ GGKR+RP+L L + + ++ A IE H TLLHDD++D + R Sbjct: 29 DPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPATGIEVYHNYTLLHDDLMDRADKR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAEGELR 146 RGK VW + ++L GD +L A+ C V K E ++ SL A + EG+ Sbjct: 89 RGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPVGHLK--EVMDLFSLTALEICEGQQM 146 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + DV EE+YL +I+ KT+VL +A+L++ +L+ G + L +G+N+G+AFQ Sbjct: 147 DMEFERRNDVKEEEYLEMIRLKTSVLLAASLKIGALLGGASAEDAERLYDFGVNMGVAFQ 206 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 L DD+LD G+ GKNIG D K T +I A K + Sbjct: 207 LKDDLLDVYGDAAVFGKNIGGDILCNKKTYMLIKALDHADKEQ 249 >gi|218128733|ref|ZP_03457537.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697] gi|217989188|gb|EEC55503.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697] Length = 324 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 122/223 (54%), Gaps = 7/223 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D V Y++ GGKR+RP+L L + + ++ A IE H TLLHDD++D + R Sbjct: 29 DPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPATGIEVYHNYTLLHDDLMDRADKR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAEGELR 146 RGK VW + ++L GD +L A+ C V K E ++ SL A + EG+ Sbjct: 89 RGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPVGHLK--EVMDLFSLTALEICEGQQM 146 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + DV EE+YL +I+ KT+VL +A+L++ +L+ G + L +G+N+G+AFQ Sbjct: 147 DMEFERRNDVKEEEYLEMIRLKTSVLLAASLKIGALLGGASAEDAERLYDFGVNMGVAFQ 206 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 L DD+LD G+ GKNIG D K T +I A K + Sbjct: 207 LKDDLLDVYGDAAVFGKNIGGDILCNKKTYMLIKALDHADKEQ 249 >gi|119478047|ref|ZP_01618126.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [marine gamma proteobacterium HTCC2143] gi|119448753|gb|EAW29996.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [marine gamma proteobacterium HTCC2143] Length = 208 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 120/208 (57%), Gaps = 2/208 (0%) Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 L S+AF +++ + + ++ V T+AEGE+ QL+ + + D TE+ Y VI +KTAVL Sbjct: 1 LYSRAFQLLVSIGNMPVMGLMADVTNTIAEGEVLQLTKAGDPDTTEDQYFQVITNKTAVL 60 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 F+AA +++A + YG+NLGIAFQL+DDVLDY G +MGKN+G+D G Sbjct: 61 FAAATAGGAILAQQDQTTVDNYYQYGLNLGIAFQLIDDVLDYEGNAADMGKNVGDDLAEG 120 Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292 KPTLP+I A ++GT ++ + I + + E+++ I++ + AL T+ A ++ Sbjct: 121 KPTLPLIYAMRKGTDQQAKLIRRAIENK--TNEDIEAVIAIVKHSGALTYTKDMAKTFSD 178 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 AK L D+ + + L + + R Sbjct: 179 NAKFCLSGAKDTPYTQGLARLATLAVDR 206 >gi|328464568|gb|EGF35937.1| polyprenyl synthetase [Lactobacillus helveticus MTCC 5463] Length = 257 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 84/214 (39%), Positives = 122/214 (57%), Gaps = 6/214 (2%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGK LRP L L A ++ + LA +IE +H ATL+HDD +DDS LRRG ++ + Sbjct: 4 NGGKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHDDTIDDSDLRRGNISIQA 63 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLSLSKNLDV 156 +G +V GD L + F ++++T ++ E L A T++ GEL Q++ NL+ Sbjct: 64 EFGKDVAVYAGDLLFTNFFDLMLDTTTEH--EYLVRNAQTMSHILNGELGQMAERFNLEQ 121 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T DYL+ IK KTA LF A E + AG AL ++G NLGIAFQ+VDD+LDY G Sbjct: 122 TFTDYLNDIKGKTAALFRLAAEEGAHFAGGNAEQSTALANFGENLGIAFQIVDDLLDYTG 181 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++ K ED G +LP++ A + + K Sbjct: 182 SA-KLNKPTLEDLATGVYSLPLLFALDQPKLKTK 214 >gi|217963918|ref|YP_002349596.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes HCC23] gi|217333188|gb|ACK38982.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes HCC23] gi|307571512|emb|CAR84691.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes L99] Length = 321 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 108/314 (34%), Positives = 165/314 (52%), Gaps = 16/314 (5%) Query: 10 KDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 KD++ V + K + + E D +L+ +GGKR+RPM +A + + V A Sbjct: 12 KDIDSVEKELKKALSGAAAETTSDAALHLLEAGGKRIRPMFVCLSARLAPNADFDAVKNA 71 Query: 69 C-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++ + E K Sbjct: 72 SVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDV 131 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G Sbjct: 132 AAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQS 191 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV A Sbjct: 192 EADYQKLFRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAM----- 246 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRE---NRALVDTEYRAYSYGQKAK---DSLRCL 301 E F K I+ +++ E + ++ E E A +Y +KA DSL + Sbjct: 247 -EDPFLKKRIS--QVTEETPAEEIAVLVEEVKKAGAKPAEDIATAYLKKAVEILDSLPQV 303 Query: 302 PDSSWKKSLMEVVD 315 P+ K ++ V+D Sbjct: 304 PELKPLKQIVRVLD 317 >gi|255030470|ref|ZP_05302421.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes LO28] Length = 292 Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 1/209 (0%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLLHDDVVDDSALRRGK 94 +L+ +GGKR+RPM +A + N V A AIE IH A+++HDDVVDD+ LRRG+ Sbjct: 27 HLLEAGGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGR 86 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 + WGN ++ GDFL +++ + E K A + LS V L+ GE+ QL N Sbjct: 87 ETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNF 146 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 D + +YL IK KTA+L +A+ + +++G + Q L +G +G+AFQ+ DDVLD+ Sbjct: 147 DQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDF 206 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G E+GK GED R G TLPV A + Sbjct: 207 VGTEKELGKPAGEDLRQGNVTLPVFFAME 235 >gi|227874599|ref|ZP_03992762.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC 35243] gi|227844808|gb|EEJ54954.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC 35243] Length = 339 Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 169/330 (51%), Gaps = 15/330 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 LE+ + + +V +++ + E ++V +L +GGKR+RP+L L + + GD Sbjct: 11 LEEKLTEALSRVEARLVEETRTAAENTTEIVSHLRAAGGKRMRPLLVLLISQLGNAGGDA 70 Query: 64 HV---LLAC--AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + L+A A+E H A+L HDD++DD+ +RRG AA + W N +V+ GD + ++A Sbjct: 71 PISEDLIAAGVAVELTHLASLYHDDLMDDATVRRGVTAAHVKWNNTLAVMAGDLIFARA- 129 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +++ +E ++ + L G++ + D + YLHV++ KT L A Sbjct: 130 SLIVSDFGRELMKYHARTFQRLCLGQMHDILGPGATDDPIDFYLHVLREKTGSLIGTAAL 189 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + ++G + A+ ++G +LG+AFQ+ DDVLD R GK G D R+G TLPV Sbjct: 190 YGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDLRSTAAVSGKTPGADLRDGTKTLPV 249 Query: 239 IL-----AFQRGTKREKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQ 292 +L A + +++ K + +S + L + + E+R +T A ++ + Sbjct: 250 LLLEKSVAAGGASDADRHLMKMIGDHEALSADAALSEVVDRLAEHRVTRETAALAETWVE 309 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +A L LP+ + K +L E F Q++N Sbjct: 310 RALGHLAVLPEGAVKTALTE---FSRQQIN 336 >gi|229821695|ref|YP_002883221.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333] gi|229567608|gb|ACQ81459.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333] Length = 334 Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 102/323 (31%), Positives = 154/323 (47%), Gaps = 38/323 (11%) Query: 20 LKRICSDVEMIPDVV-KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 L S E++ D ++L+ +GGKR+RP L L TA + D + A A+E H AT Sbjct: 28 LAAAVSSTEILADAPSRHLVNAGGKRMRPALALLTAQLGSGTSDAVLEAAVAVELTHLAT 87 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ------EALEA 132 L HDDV+D + RRG +A VWGN ++L GD L ++A +V E E E Sbjct: 88 LYHDDVMDSAPTRRGAPSAHEVWGNSVAILTGDLLFARASRLVSELGPDAVRVQAETFER 147 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L L G+L + ++ + E YL V+ KT L +A+ + ++ +GV Sbjct: 148 LCL-------GQLHETIGPQDGEDAVEHYLDVLAGKTGSLIAASAQYGAMFSGVGADALG 200 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 + YG +G+AFQL DDV+D + + GK G D R G T+PV+L R Sbjct: 201 TVVRYGEKVGVAFQLADDVIDLLSDADVTGKTPGTDLREGVATMPVLLLRARAD------ 254 Query: 253 WKSTIND-GKISVENLKKAFIIMRENRAL--VDTEYRAYSYGQKAKD-----------SL 298 + ++D G+ +E L + ++ AL V E RA+ +A+D L Sbjct: 255 -RGAVDDAGRAVLERLDGD---LSDDAALDAVLAELRAHDVLDEARDLARAWAADAVAEL 310 Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321 LPDS K++L + RL Sbjct: 311 DGLPDSPVKRALAVFASLVVDRL 333 >gi|255945077|ref|XP_002563306.1| Pc20g07830 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588041|emb|CAP86112.1| Pc20g07830 [Penicillium chrysogenum Wisconsin 54-1255] Length = 447 Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 114/353 (32%), Positives = 155/353 (43%), Gaps = 77/353 (21%) Query: 33 VVKYLIFSGGKRLRPMLTL----ATAL-----------------------MLE------- 58 V KY S GK +RPML L ATAL +LE Sbjct: 105 VAKYYTHSEGKHMRPMLVLLMSQATALDPRKHHSYTDKPSPVDSSFSAPSILEDANPEMN 164 Query: 59 ------------YRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GD+++L LA E IHTA+LLHDDV+D++ RR +A L + Sbjct: 165 PLVAPNADSKYDIAGDDYILPSQRRLAEITELIHTASLLHDDVIDNAVTRRANSSANLAF 224 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-------SLSKNL 154 GN+ +VL GDF+L +A + + E E ++ V L EGE QL S Sbjct: 225 GNKMAVLAGDFMLGRASVALARLRDPEVTELMATVIANLVEGEFMQLKNTAQDESKPVYT 284 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 D T YL KTA L S + ++++ V +A +YG NLG+AFQLVDD+LDY Sbjct: 285 DETLSYYLQKTYLKTASLISKSCRSAAVLGRSAPEVIEASYAYGRNLGLAFQLVDDMLDY 344 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274 EMGK +G D G T P++ A WKS G + ++ + Sbjct: 345 TVTEAEMGKPVGADLELGLATAPLLFA-----------WKSNPELGPLVGRKFREEGDVQ 393 Query: 275 RENRALV-------DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 R R LV T A Y KA ++ PDS K SL+E+ + + R Sbjct: 394 RA-RELVYRSDGVEQTRALAREYADKAIAAISDFPDSDAKASLIEMCEKTMNR 445 >gi|260905104|ref|ZP_05913426.1| farnesyl pyrophosphate synthetase [Brevibacterium linens BL2] Length = 336 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 146/306 (47%), Gaps = 8/306 (2%) Query: 20 LKRICSDVEMIPDVV-KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 L + +PD K+L+ +GGKR RP L L TA + E D + A A+E IH A+ Sbjct: 32 LYEVTEQTRKLPDTTSKHLLAAGGKRARPNLLLLTARLGEANRDAIIDAAVAVELIHLAS 91 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+DD+ +RRG AA VWGN ++L GD L S+A V EA+ + Sbjct: 92 LYHDDVMDDAPVRRGAPAAHEVWGNSVAILTGDLLFSKA-SGVTAKLGPEAVRVQAETFE 150 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G+L + + E Y+ V+ KT L + + + + + S+ + ++ +G Sbjct: 151 RLVLGQLNEFAGPPEDADAIEHYIQVLADKTGSLIATSAQFGVMFSQADQSLAEPVRIFG 210 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +GIAFQL DD++D + GK G D R PTLPV+ + R + + + + Sbjct: 211 ERVGIAFQLADDIIDLTTTSSVSGKTPGTDLRERVPTLPVL--YVRAAAADGDATAAEVV 268 Query: 259 ---DGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 D +S E L+ A + + A + AK +L LPD K+SL Sbjct: 269 ELLDADLSSDEALESARAALAAHPVTARARAEAVRWADDAKAALAPLPDGVVKESLFTFA 328 Query: 315 DFCLQR 320 D + R Sbjct: 329 DSVVTR 334 >gi|219669361|ref|YP_002459796.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] gi|219539621|gb|ACL21360.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] Length = 331 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 95/294 (32%), Positives = 140/294 (47%), Gaps = 4/294 (1%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 + I D L+ SGGKRLRP+LTL +A + A A E IH A+L+HDDV+D Sbjct: 39 DTIKDSCLLLLDSGGKRLRPLLTLQSAQCFGPLNSAALDAAVAAELIHMASLIHDDVIDH 98 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S RRG GNQ +VL GD++ ++AF ++ ++ L ++ +GE++Q Sbjct: 99 SDRRRGIPTINSQRGNQVAVLAGDYVFAEAFRILANKHLLTSMSYLVDAIQSMCDGEVQQ 158 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 +L V Y I KT +L ++ + AG +AL YGMNLG A+Q+ Sbjct: 159 AEQRCDLAVEPSQYFQRIAQKTGILLASCCCSGAASAGANQKAVEALGQYGMNLGYAYQI 218 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW-KSTINDGKISVEN 266 +DD+LD+ G GK D NG TLPVI K W + + +S N Sbjct: 219 IDDILDFTGNPQVTGKPAAADLVNGYITLPVIYLLD---KPLYGPWARDMLQARDLSPAN 275 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +++ + + AL + A + A +L LP S K L E+ L R Sbjct: 276 VQRIIQALISSGALNEAFNTALHCAETAVQALSSLPPSPSKTFLSELTQTILYR 329 >gi|293389766|ref|ZP_06634208.1| polyprenyl synthetase [Enterococcus faecalis S613] gi|291080924|gb|EFE17887.1| polyprenyl synthetase [Enterococcus faecalis S613] Length = 305 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 8 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 63 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GDFL F ++ + S +L+++ L + ++ Sbjct: 64 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDFLFVCCFKLLSDYSS--SLKSIQLNSRSM 121 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 122 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 182 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 238 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 239 KKEALTNEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEITQ 298 Query: 316 FCLQRLN 322 L R N Sbjct: 299 TILTREN 305 >gi|257871156|ref|ZP_05650809.1| trans-hexaprenyltranstransferase [Enterococcus gallinarum EG2] gi|257805320|gb|EEV34142.1| trans-hexaprenyltranstransferase [Enterococcus gallinarum EG2] Length = 328 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 156/291 (53%), Gaps = 9/291 (3%) Query: 37 LIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 +I SGGK LRP L + E + V L+ AIE +HTA+L+HDD+VD + RR Sbjct: 42 MIHSGGKMLRPAYQLLFSEFGEEKDSQKAVALSAAIEMLHTASLIHDDIVDQADTRRSLP 101 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACTLAEGELRQLSLSKNL 154 R +GN +V GD+L F ++ + S ++L+ S T+ GEL Q+S +L Sbjct: 102 TIRAQFGNDVAVYAGDYLFVCCFKLLADYAGSLKSLQINSRSMETILAGELGQMSKRYDL 161 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +VT EDYL I KTA LF+ + + + +G + K+ G ++G+AFQ++DD+LDY Sbjct: 162 NVTIEDYLENISGKTAELFALSCFIGAYESGASLRLANQAKTIGQSIGLAFQIMDDILDY 221 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAFII 273 + +GK + ED + G +LP++LA K+E+ + +++ + ++ + I Sbjct: 222 SQSESALGKPVLEDVKQGVYSLPLLLAL----KKERAVLTPLLEKKAEMTDQEAQQVYQI 277 Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVDFCLQRLN 322 + + ++ + A Y +KA ++ LPD + K L ++ + L R N Sbjct: 278 VHNSHSVEEAHQLAARYTKKALQGIKKLPDPGKNTKDYLYQITNQILARTN 328 >gi|150402965|ref|YP_001330259.1| polyprenyl synthetase [Methanococcus maripaludis C7] gi|150033995|gb|ABR66108.1| Polyprenyl synthetase [Methanococcus maripaludis C7] Length = 317 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/292 (28%), Positives = 152/292 (52%), Gaps = 8/292 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 K+L+ +GGKR+RP L++ T L+ + + + A ++E IH TL+HDD++D+ RRG Sbjct: 30 KHLLLAGGKRVRPYLSIITYLLKKDDINEIMAPALSVELIHNYTLVHDDIMDNDDQRRGM 89 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACTLAEGELRQLSL 150 ++G ++L GD L ++AF + K+ E L+ LS + EG+ + Sbjct: 90 PTVHTIYGEPIAILAGDLLYAKAFEALSNIGDSKKAHEVLKVLSKACVEVCEGQTDDMEF 149 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + +E Y +I KT L A +E+ +++A R AL +Y +G+ FQ+ DD Sbjct: 150 EERFPTLDE-YFDMISKKTGALIVAPVEIGAIMAECTPEERNALCNYAKRIGMTFQIQDD 208 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 VLD G+ +GK +G D GK T+ +I A + ++ +K + + + E + +A Sbjct: 209 VLDLIGDQKTIGKPVGSDIVEGKKTMMIIYAMENLSEDKKERLLQILGNNNATPEEVSEA 268 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 I+ ++ + + ++AK L+ D+ +K+L + DF ++R++ Sbjct: 269 IEILADSIEYAKNTMKKAT--EEAKHYLKIF-DAEKRKNLETIADFIIERIH 317 >gi|159039961|ref|YP_001539214.1| polyprenyl synthetase [Salinispora arenicola CNS-205] gi|157918796|gb|ABW00224.1| Polyprenyl synthetase [Salinispora arenicola CNS-205] Length = 344 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/323 (29%), Positives = 149/323 (46%), Gaps = 11/323 (3%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L D L+ +E V + + S + + ++L+ +GGKR RP+L A + Sbjct: 25 LPDSVLRVLEGVEAALRDDVASADPFVTEAARHLLDAGGKRFRPLLVALGAQFGDPTRAQ 84 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 V A +E H ATL HDDV+D++ +RRG +A W N ++LVGD+L F + Sbjct: 85 VVPAAVVVELTHLATLYHDDVMDEAPVRRGAPSANSRWTNSVAILVGDYL----FARAAD 140 Query: 124 TKSQEALEALSLVACTLA---EGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + EA+ L A T A G++ + + +D +LHVI KT L + + Sbjct: 141 ISADLGTEAVRLQARTFARLVHGQIAETVGPRPGVDPVAH-HLHVIAEKTGSLIATSARF 199 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 L G AL YG +G+AFQL DD+LD E GK G D R G PTLPV+ Sbjct: 200 GGLFGGADPRYVAALAGYGETIGVAFQLSDDLLDIASESERSGKTPGTDLREGVPTLPVL 259 Query: 240 LAFQRGTKREKNF-WKSTINDGKISVENLK-KAFIIMRENRALVDTEYRAYSYGQKAKDS 297 A + + + G ++ ++L +A ++RE+ A+ S + A+ Sbjct: 260 YALASDDADASSLRLREILAAGPVTDDDLHAEALGLLRESPAMKRARETVRSRAEDARAQ 319 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L LP ++ L + D R Sbjct: 320 LAPLPQGPARRVLESLCDHIADR 342 >gi|307269989|ref|ZP_07551314.1| polyprenyl synthetase [Enterococcus faecalis TX4248] gi|307272595|ref|ZP_07553847.1| polyprenyl synthetase [Enterococcus faecalis TX0855] gi|306510733|gb|EFM79751.1| polyprenyl synthetase [Enterococcus faecalis TX0855] gi|306513654|gb|EFM82261.1| polyprenyl synthetase [Enterococcus faecalis TX4248] gi|315025798|gb|EFT37730.1| polyprenyl synthetase [Enterococcus faecalis TX2137] gi|315154679|gb|EFT98695.1| polyprenyl synthetase [Enterococcus faecalis TX0043] gi|315158962|gb|EFU02979.1| polyprenyl synthetase [Enterococcus faecalis TX0312] gi|315167121|gb|EFU11138.1| polyprenyl synthetase [Enterococcus faecalis TX1341] Length = 305 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 27/311 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 8 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 63 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 64 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 121 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 122 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW---- 253 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE Sbjct: 182 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREVLLPLLMK 239 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLM 311 K T+ D E ++ + ++ E + + A Y +KA + LP++ K+ L Sbjct: 240 KETLTD-----EETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLY 294 Query: 312 EVVDFCLQRLN 322 E+ L R N Sbjct: 295 EITQTILTREN 305 >gi|239918251|ref|YP_002957809.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] gi|281415557|ref|ZP_06247299.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] gi|239839458|gb|ACS31255.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] Length = 354 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 90/309 (29%), Positives = 151/309 (48%), Gaps = 29/309 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-------------LACAIEFIHTATL 79 +L+ +GGKR+RP+LT+ +L+ GD + A +E H ATL Sbjct: 52 AAHHLMAAGGKRVRPVLTVLASLL----GDPALASGEVADVDAPARQAAVVMELTHLATL 107 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 HDDV+D++ +RRG AA +WGN ++L GD + ++A ++ E ++ + + A T Sbjct: 108 YHDDVMDEAPVRRGAPAAHRLWGNSAAILAGDLIFARASQLMAELGTRP----VQIQADT 163 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L +G+L + E Y V+ KT L +AA + +L+ G + Q +++ Sbjct: 164 FERLVQGQLWETRGPAEGTDPIEHYYAVLSGKTGSLIAAAGMLGALLGGADEAAVQVMRA 223 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL----AFQRGTKREKNF 252 YG +G+AFQL DD++D G+ +GK G D R PTL +L A G + E Sbjct: 224 YGEKVGLAFQLADDLIDLTGDTERIGKVPGTDLRERVPTLTTLLLARAAQGEGPEAEDAR 283 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLPDSSWKKSLM 311 + DG + ++ A + +D + + ++AK +L LPDS+ K +L Sbjct: 284 RVRALVDGPLDTDDQLAAAVAALTGHPAIDEAWAITRGWAEQAKQALTPLPDSAVKTALE 343 Query: 312 EVVDFCLQR 320 D+ + R Sbjct: 344 AFADYVVGR 352 >gi|227494517|ref|ZP_03924833.1| possible trans-hexaprenyltranstransferase [Actinomyces coleocanis DSM 15436] gi|226832251|gb|EEH64634.1| possible trans-hexaprenyltranstransferase [Actinomyces coleocanis DSM 15436] Length = 332 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/334 (30%), Positives = 163/334 (48%), Gaps = 14/334 (4%) Query: 1 MKM----LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MKM LE L DME+V L+ K + ++ ++ +L +GGKR+RP+L L A + Sbjct: 1 MKMTQEQLEALLGADMERVEDLLYKSVTGSGALVDELTSHLSNAGGKRMRPLLVLICAQL 60 Query: 57 ---LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113 + + + A A+E H ATL HDDV+D + RRG AA+ WGN ++L GD L Sbjct: 61 GSPSQVASQDVIDAATAVELTHLATLYHDDVMDSAPQRRGVPAAQHQWGNNRAILAGDVL 120 Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVL 172 ++A +V Q ++ + L G+L + + D E Y+ V+ KT L Sbjct: 121 FARASRLVARL-GQRTIDYHAQTFERLCIGQLNETFGPETDFDPVEF-YIKVLSDKTGSL 178 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + A + G + V +A+ YG +G+AFQL DDV+D + + GK G D G Sbjct: 179 INTAAVFGAWHGGATDEVAEAVGVYGERIGVAFQLADDVIDLTSDGSVSGKTPGTDLVEG 238 Query: 233 KPTLPVILAFQR---GT-KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288 TLP++L +R GT E + I+ L +R++ + +T A Sbjct: 239 VTTLPILLLRERLSAGTLDAEGQRLLADIDSDLSDSAKLASVVARLRDSEVVAETRQIAQ 298 Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 + A D+L L DS K++L+++ + R+N Sbjct: 299 DWAGAAVDALAPLEDSVAKQALVDLAQMMVDRMN 332 >gi|283954169|ref|ZP_06371694.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 414] gi|283794448|gb|EFC33192.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 414] Length = 297 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 92/308 (29%), Positives = 168/308 (54%), Gaps = 18/308 (5%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+K++ LI K+ +++ P + L GK+LR L LA A + + +I Sbjct: 1 MQKIDDLI-KQFLQELDYEPILNMLLNVKSGKKLRSKLLLAIA----EESEIAFKICASI 55 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IH A+LLHDD++D+S LRRG + +G + ++++GD L S+AF + + ++ A Sbjct: 56 ELIHLASLLHDDIIDESELRRGSRSVNAEFGTKNALMLGDILYSKAFYELSKVDTRFA-S 114 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +S LA GEL ++L + ++ +E YL +I +KTA+L A+ +++A + Sbjct: 115 IISDAVVKLAIGELMDVNLGEKFNINKEAYLKMIYNKTAILIEASARCGAILARLH---E 171 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + YG NLG+AFQ++DD+LD + + +GK DF+ GK TLP I ++ ++++ Sbjct: 172 KDFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMSDFKEGKTTLPYIYLYENLQEQDRV 231 Query: 252 F----WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + +K +N+ + E LK F E +AL + A +Y +KA ++++ ++ Sbjct: 232 YLQTLFKKDLNENE--KEWLKIKF---EEQKALEKAIFEAKTYAKKANEAIKKYDNNKLN 286 Query: 308 KSLMEVVD 315 + ++D Sbjct: 287 DIIKAMID 294 >gi|317479594|ref|ZP_07938721.1| polyprenyl synthetase [Bacteroides sp. 4_1_36] gi|316904256|gb|EFV26083.1| polyprenyl synthetase [Bacteroides sp. 4_1_36] Length = 346 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/221 (36%), Positives = 122/221 (55%), Gaps = 7/221 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 V Y++ GGKR+RP+L L + Y+ D + A IE H TLLHDD++D + R Sbjct: 53 VTYVLSMGGKRIRPVLMLMAYNL--YQEDITRIFNPATGIEVYHNYTLLHDDLMDRADRR 110 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQL 148 RGK VW + ++L GD +L A+ + + + E ++ SL A + EG+ + Sbjct: 111 RGKETVHKVWDDNAAILSGDAMLVLAYQFMAQCPVEHLKEVMDIFSLTALEICEGQQLDM 170 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DV E+YL +I+ KT+VL +A+L++ +L+ G + + L +GMNLG+AFQL Sbjct: 171 EFEHRKDVKAEEYLEMIRLKTSVLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLK 230 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 DD LD G+ GKNIG D K T +I AF+ + + Sbjct: 231 DDFLDVYGDTAVFGKNIGGDILCNKKTYMLIKAFEHADEEQ 271 >gi|288801181|ref|ZP_06406636.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039] gi|288331792|gb|EFC70275.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039] Length = 325 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/233 (34%), Positives = 128/233 (54%), Gaps = 10/233 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 +KY + GGKR+RPML L T + Y+ D +L A A+E H TLLHDD++D++ LR Sbjct: 31 IKYSLSMGGKRIRPMLMLLTYQL--YKNDPQSILPVASALETYHNYTLLHDDLMDNALLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACTLAEGELRQL 148 RG+ W T++L GD +L A+ ++ E K +E L+ ++ A + EG+ + Sbjct: 89 RGQPTVHKKWNANTAILSGDSMLVFAYKLLAECNVDKLKEVLDLFTITALEIGEGQQYDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DV E +Y+ +I+ KT+VL + ++++ +++AG + L +G +G+AFQL Sbjct: 149 DFELRNDVAESEYIEMIRLKTSVLLACSMKIGAILAGAPSEDANNLYRFGELIGLAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT---KREKNFWKSTIN 258 DD LD G+ GK IG D + K T +I A R ++E W + N Sbjct: 209 DDYLDVYGDSKVFGKAIGGDIASNKKTFMLINALSRANETQRKELEMWIANTN 261 >gi|220913570|ref|YP_002488879.1| polyprenyl synthetase [Arthrobacter chlorophenolicus A6] gi|219860448|gb|ACL40790.1| Polyprenyl synthetase [Arthrobacter chlorophenolicus A6] Length = 366 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 95/281 (33%), Positives = 145/281 (51%), Gaps = 9/281 (3%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 ++L+ +GGKR+RP+LTL A + + V A +E H ATL HDDV+D + RRG Sbjct: 78 RHLVEAGGKRIRPLLTLLCAHLGDASLPAVVQAAVVVELTHLATLYHDDVMDSAPFRRGA 137 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLS 151 A VWGN +VL GD + ++A +V E + AL + A T L G+L + Sbjct: 138 PTAHEVWGNSVAVLTGDLIFARASILVSELGGR----ALGIQARTFERLCLGQLHETVGP 193 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + + E YL VI KT L +A+ + ++ +G + L YG +G+AFQL DDV Sbjct: 194 RPDEDPIEHYLSVIADKTGSLVAASGQFGAIFSGADEAYEDVLVEYGEKVGVAFQLADDV 253 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK-STINDGKISV-ENLKK 269 +D G + GK+ G D R G PTLPV+ + +++ + + DG +S E L Sbjct: 254 IDVTGVKVKSGKSPGTDLREGVPTLPVLFLRRDAAAGDQSAVELLKLIDGDLSSDEALAA 313 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 A +RE+ ++ A + +A +L LP+ K SL Sbjct: 314 AVAGLREHPVTAESWVVARRWADEAIAALAPLPEGVVKDSL 354 >gi|311741756|ref|ZP_07715567.1| possible trans-hexaprenyltranstransferase [Aeromicrobium marinum DSM 15272] gi|311314762|gb|EFQ84668.1| possible trans-hexaprenyltranstransferase [Aeromicrobium marinum DSM 15272] Length = 332 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 97/330 (29%), Positives = 153/330 (46%), Gaps = 17/330 (5%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 +LE L +++V + + S + + +L+ +GGKR RP++ A + Sbjct: 11 PVLEARILAGVDEVERQLAAAVDSPEAFVAEAAAHLLNAGGKRFRPLVVALCAEFGDPAA 70 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 V A +E H ATL HDDV+D++ RRG ++A W N ++LVGD+L +QA + Sbjct: 71 PGVVPSAVVVELTHLATLYHDDVMDEADKRRGALSANARWDNTLAILVGDYLFAQA-SDI 129 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + T EA+ + L G++R+ + D + YL V+ KT L + + + Sbjct: 130 VSTLGPEAVRIQARTFSRLVRGQIRETIGPGDGDPLQH-YLGVVADKTGSLIATSARFGA 188 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +++ V AL +G +G AFQL DD++D E E GK G D R G PTLPV+L Sbjct: 189 MMSAAPVEVEHALTEFGERIGAAFQLRDDIIDVASETGESGKTPGTDLREGVPTLPVLLV 248 Query: 242 FQRGTK-------REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY--SYGQ 292 Q R + + D E L+ +R + A+ E R+Y S Sbjct: 249 QQMSAGSTDPAEVRLLDLLGRPLTDDAEHAEALEA----LRRHPAM--DEARSYVQSEAD 302 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 A+ L LPD + +L + D RL Sbjct: 303 AARRLLEKLPDVPARAALAALCDTVATRLG 332 >gi|330961586|gb|EGH61846.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 205 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 123/209 (58%), Gaps = 6/209 (2%) Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 ++F M++E S E + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A Sbjct: 1 RSFEMMVELGSMEVMRILSKATRVIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEA 60 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + ++ + ++ +AL+++G +LG+AFQLVDD+LDY G+ +GKN+G+D GKPT Sbjct: 61 STHSAAALCNASDAQTEALRTFGDHLGVAFQLVDDLLDYLGDAETLGKNVGDDLAEGKPT 120 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEYR-AYSYGQK 293 LP+I + G+ + + I G + +E+++ A E+ +D R A Y + Sbjct: 121 LPLIYTMREGSPEQAALVRQAIQKGGLEDLESIRNAV----ESAGALDYTARLARDYAAR 176 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 A L LP S ++ +L+E+ +F + R + Sbjct: 177 AIACLDALPPSEYRDALVELSEFAVARTH 205 >gi|118576797|ref|YP_876540.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase [Cenarchaeum symbiosum A] gi|118195318|gb|ABK78236.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase [Cenarchaeum symbiosum A] Length = 321 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 83/320 (25%), Positives = 158/320 (49%), Gaps = 7/320 (2%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 ++ + +N L+ +R+ + +LI GGKR RP + + + L + + + Sbjct: 1 MSASEAAAINALLRQRLRGRPSRLYAAAAHLIEHGGKRFRPYMLIKSCQALGGKKSDAMP 60 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 A AIE IH TLLHDD++D+ ++R G +G ++L GD L S+A+ ++ + Sbjct: 61 AATAIEMIHNFTLLHDDIMDNDSIRHGVPTVHKKFGVPVAILAGDVLFSKAYQVISGPRV 120 Query: 127 QEALEA-----LSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVS 180 E A L+ + EG+L + +++ + T +Y+ +I KTA LF AA + Sbjct: 121 PEKRAARLTSRLAAACVDVCEGQLYDMDMAEGAKLPTRSEYIMMIGKKTASLFGAACAMG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ +G + ++G LG+AFQ+ DD++ G+ K +G D R GK +LPV++ Sbjct: 181 AICSGADEKDARRFAAFGTGLGVAFQITDDLIGITGDPKVTKKPVGNDIREGKKSLPVLM 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A ++ +++ ++ + + + L+ A ++ D A SY +KA +L Sbjct: 241 ALKKARGKDRAAIRAAFGNARATSVQLRAAVSAVKSLGIEDDVRREAGSYAKKASSALDR 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P + L+ ++D + R Sbjct: 301 YP-GRHRDDLLSLLDCVVWR 319 >gi|270295967|ref|ZP_06202167.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273371|gb|EFA19233.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 324 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/221 (36%), Positives = 122/221 (55%), Gaps = 7/221 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 V Y++ GGKR+RP+L L + Y+ D + A IE H TLLHDD++D + R Sbjct: 31 VTYVLSMGGKRIRPVLMLMAYNL--YQEDITRIFNPATGIEVYHNYTLLHDDLMDRADRR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQL 148 RGK VW + ++L GD +L A+ + + + E ++ SL A + EG+ + Sbjct: 89 RGKETVHKVWDDNAAILSGDAMLVLAYQFMAQCPVEHLKEVMDIFSLTALEICEGQQLDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DV E+YL +I+ KT+VL +A+L++ +L+ G + + L +GMNLG+AFQL Sbjct: 149 EFEHRKDVKAEEYLEMIRLKTSVLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLK 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 DD LD G+ GKNIG D K T +I AF+ + + Sbjct: 209 DDFLDIYGDAAVFGKNIGGDILCNKKTYMLIKAFEHADEEQ 249 >gi|269977600|ref|ZP_06184567.1| bifunctional short chain isoprenyl diphosphate synthase [Mobiluncus mulieris 28-1] gi|269934203|gb|EEZ90770.1| bifunctional short chain isoprenyl diphosphate synthase [Mobiluncus mulieris 28-1] Length = 339 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 92/322 (28%), Positives = 165/322 (51%), Gaps = 15/322 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV---LLA 68 + +V +++ + E ++V +L +GGKR+RP+L L + + GD + L+A Sbjct: 19 LSRVEARLVEETRTAAENTTEIVSHLRAAGGKRMRPLLVLLISQLGNAGGDAPISEDLIA 78 Query: 69 C--AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 A+E H A+L HDD++DD+ +RRG AA + W N +V+ GD + ++A +++ Sbjct: 79 AGVAVELTHLASLYHDDLMDDATVRRGVTAAHVKWNNTLAVMAGDLIFARA-SLIVSDFG 137 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E ++ + L G++ + D + YLHV++ KT L A + ++G Sbjct: 138 RELMKYHARTFQRLCLGQMHDILGPGATDDPIDFYLHVLREKTGSLIGTAALYGAALSGC 197 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL-----A 241 + A+ ++G +LG+AFQ+ DDVLD R GK G D R+G TLPV+L A Sbjct: 198 SPEICTAVTAFGEDLGVAFQIADDVLDLRSTAAVSGKTPGADLRDGTKTLPVLLLEKSVA 257 Query: 242 FQRGTKREKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + +++ K + +S + L + + E+R +T A ++ ++A L Sbjct: 258 AGGASDADRHLMKMIGDHEALSADAALSEVVDRLAEHRVTRETAALAETWVERALGHLAV 317 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+ + K +L E F Q++N Sbjct: 318 LPEGAVKTALTE---FSRQQIN 336 >gi|257466362|ref|ZP_05630673.1| heptaprenyl diphosphate synthase component II [Fusobacterium gonidiaformans ATCC 25563] gi|315917518|ref|ZP_07913758.1| heptaprenyl diphosphate synthase component II [Fusobacterium gonidiaformans ATCC 25563] gi|313691393|gb|EFS28228.1| heptaprenyl diphosphate synthase component II [Fusobacterium gonidiaformans ATCC 25563] Length = 316 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 3/208 (1%) Query: 40 SGGKRLRPMLTLATALM---LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 + GK R L L A + E + + LA +E H A+L+HDD+VDDS RRGK++ Sbjct: 32 ASGKMFRTKLLLFCASLGPCYEEKKEKLCKLAAMVELTHLASLIHDDIVDDSPYRRGKIS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 + +G +V GDFL+++ + + E+ LS + GE+ Q DV Sbjct: 92 IQGKYGKDAAVYAGDFLMARIYYYEAVERLNESAALLSKTVEHMCTGEIGQDLCRYREDV 151 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + E+Y I+ KTA LF A + ++ AG + + LK +G NLG+ FQL DD+LD+ Sbjct: 152 SVEEYFQNIQGKTAALFETACHIGAMEAGCSQEMIEKLKLFGRNLGMMFQLKDDILDFTS 211 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQR 244 ++E+GK +DF+NG T PVI+A Q+ Sbjct: 212 NIDEIGKETHKDFQNGIYTFPVIMALQQ 239 >gi|242096724|ref|XP_002438852.1| hypothetical protein SORBIDRAFT_10g027240 [Sorghum bicolor] gi|241917075|gb|EER90219.1| hypothetical protein SORBIDRAFT_10g027240 [Sorghum bicolor] Length = 431 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/323 (30%), Positives = 162/323 (50%), Gaps = 30/323 (9%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALM--LEYRGDNHVL---------- 66 + ++V + +Y G GKR RP +L +A+AL L + VL Sbjct: 112 VAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSESTEGGVLSILADKLRTR 171 Query: 67 ---LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A E IH A+LLHDDV+DD+ RRG + L+ GN+ SVL GDFLLS+A + Sbjct: 172 QQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNLIMGNKLSVLAGDFLLSRACVALAA 231 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E + ++ L GE Q+S S+ + E YL KTA L S + + +++ Sbjct: 232 LGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMEYYLQKTYYKTASLISNSCKAVAIL 291 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V YG NLG+AFQL+DDVLD+ G +GK D R+G T P++ A + Sbjct: 292 AGHTAEVSVLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGVITAPMLYAME 351 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 E + ++ G + N++ A +R++R + T+ A + +A ++ LPD Sbjct: 352 -----EFPQLQEVVDRGFDNPANIEIALDYLRKSRGIERTKELAREHADRAVKAIESLPD 406 Query: 304 S------SWKKSLMEVVDFCLQR 320 S + +++L+++ + + R Sbjct: 407 SDDEDVLTSRRALIDITERVITR 429 >gi|332299227|ref|YP_004441148.1| Trans-hexaprenyltranstransferase [Porphyromonas asaccharolytica DSM 20707] gi|332176290|gb|AEE11980.1| Trans-hexaprenyltranstransferase [Porphyromonas asaccharolytica DSM 20707] Length = 327 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 151/300 (50%), Gaps = 8/300 (2%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLLHDD 83 SD ++ +++L S GK +RP++ A + + + L A IE +HTA+L+HDD Sbjct: 30 SDAPVLSHALEHLRLSSGKHIRPIIVGLCAQLCAGQTNEQTLSAALVIELLHTASLIHDD 89 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETKSQEALEALSLVACTLAE 142 V+D S RRG+ ++ N +VL+GD++LS AF +V + E L ++ L+ Sbjct: 90 VIDWSDTRRGQPTLNALYSNHQAVLMGDYVLSTAFLELVSREHTPEMLRVVAQAGRDLSI 149 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GEL QLSLSK EEDY V+ KT LF A+ ++ +L + G +G Sbjct: 150 GELMQLSLSKAHTYREEDYYAVVDRKTGALFEASAKLGALSVDATEEQVKRCSRLGQLMG 209 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--G 260 AFQL DD+ DY ++ +GK G D GK +LP++ T E++ S + G Sbjct: 210 RAFQLQDDLFDYDTALD-VGKPTGHDLIEGKVSLPLLYVLNHATPTERDEIISYLQQPIG 268 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 S+E L + I E + TE + Q+A D LR SS +++L + +R Sbjct: 269 SDSIEYLLR---IANERGGIDYTERQIQHIHQEAIDLLRSFTPSSTRETLERFITLLGER 325 >gi|229547329|ref|ZP_04436054.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX1322] gi|255970563|ref|ZP_05421149.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T1] gi|256958518|ref|ZP_05562689.1| trans-hexaprenyltranstransferase [Enterococcus faecalis DS5] gi|256963076|ref|ZP_05567247.1| trans-hexaprenyltranstransferase [Enterococcus faecalis HIP11704] gi|257088406|ref|ZP_05582767.1| trans-hexaprenyltranstransferase [Enterococcus faecalis D6] gi|257420312|ref|ZP_05597302.1| trans-hexaprenyltranstransferase [Enterococcus faecalis X98] gi|294780744|ref|ZP_06746104.1| polyprenyl synthetase [Enterococcus faecalis PC1.1] gi|312953761|ref|ZP_07772592.1| polyprenyl synthetase [Enterococcus faecalis TX0102] gi|229307568|gb|EEN73555.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX1322] gi|255961581|gb|EET94057.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T1] gi|256949014|gb|EEU65646.1| trans-hexaprenyltranstransferase [Enterococcus faecalis DS5] gi|256953572|gb|EEU70204.1| trans-hexaprenyltranstransferase [Enterococcus faecalis HIP11704] gi|256996436|gb|EEU83738.1| trans-hexaprenyltranstransferase [Enterococcus faecalis D6] gi|257162136|gb|EEU92096.1| trans-hexaprenyltranstransferase [Enterococcus faecalis X98] gi|294452184|gb|EFG20626.1| polyprenyl synthetase [Enterococcus faecalis PC1.1] gi|310628321|gb|EFQ11604.1| polyprenyl synthetase [Enterococcus faecalis TX0102] gi|315033018|gb|EFT44950.1| polyprenyl synthetase [Enterococcus faecalis TX0017] gi|315035236|gb|EFT47168.1| polyprenyl synthetase [Enterococcus faecalis TX0027] gi|315152723|gb|EFT96739.1| polyprenyl synthetase [Enterococcus faecalis TX0031] gi|315171248|gb|EFU15265.1| polyprenyl synthetase [Enterococcus faecalis TX1342] gi|323479172|gb|ADX78611.1| polyprenyl synthetase family protein [Enterococcus faecalis 62] gi|327536366|gb|AEA95200.1| trans-hexaprenyltranstransferase [Enterococcus faecalis OG1RF] Length = 328 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 27/311 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 31 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 86 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 87 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 144 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 145 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 204 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW---- 253 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE Sbjct: 205 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREVLLPLLMK 262 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLM 311 K T+ D E ++ + ++ E + + A Y +KA + LP++ K+ L Sbjct: 263 KETLTD-----EETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLY 317 Query: 312 EVVDFCLQRLN 322 E+ L R N Sbjct: 318 EITQTILTREN 328 >gi|310799250|gb|EFQ34143.1| polyprenyl synthetase [Glomerella graminicola M1.001] Length = 455 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 138/264 (52%), Gaps = 18/264 (6%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + ++ Sbjct: 198 LAEITELIHTASLLHDDVIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRN 257 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTE------ED----YLHVIKSKTAVLFSAA 176 E +E L+ V L EGE QL KN + E ED YL KTA L S + Sbjct: 258 AEVIELLATVIANLVEGEFMQL---KNTERDERRPVWSEDALAYYLQKTYLKTASLISKS 314 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 S+++ G + +A +YG NLG+AFQLVDD+LDY E+GK G D G T Sbjct: 315 CRASAILGGSDAASVEAAYAYGKNLGLAFQLVDDMLDYTRSEKELGKPAGADLELGLATA 374 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 P++ A++ + + +G ++ +A ++ ++ + T A Y ++A Sbjct: 375 PLLFAWKTMPELGALVGRKFEQEGDVA-----RARQLVLQSDGIEQTRALAEDYSERAIA 429 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 ++ PDS K L+E+ L+R Sbjct: 430 AISGFPDSEAKDGLVEMAVKALKR 453 >gi|315150866|gb|EFT94882.1| polyprenyl synthetase [Enterococcus faecalis TX0012] Length = 305 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 27/311 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 8 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 63 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 64 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 121 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 122 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW---- 253 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE Sbjct: 182 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREVLLPLLMK 239 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLM 311 K T+ D E ++ + ++ E + + A Y +KA + LP++ K+ L Sbjct: 240 KETLTD-----EETQEIYRLVHELGGVEKAQELATHYTEKALKEISKLPETKAQAKEQLY 294 Query: 312 EVVDFCLQRLN 322 E+ L R N Sbjct: 295 EITQTILTREN 305 >gi|306817884|ref|ZP_07451623.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC 35239] gi|304649363|gb|EFM46649.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC 35239] Length = 339 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 169/330 (51%), Gaps = 15/330 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 LE+ + + +V +++ + E ++V +L +GGKR+RP+L L + + GD Sbjct: 11 LEEKLTEALSRVEARLVEETRTAQENTTEIVSHLRAAGGKRMRPLLVLLISQLGNAGGDA 70 Query: 64 HV---LLAC--AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + L+A A+E H A+L HDD++DD+ +RRG AA + W N +V+ GD + ++A Sbjct: 71 PISEDLIAAGVAVELTHLASLYHDDLMDDATVRRGVTAAHVKWNNTLAVMAGDLIFARA- 129 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +++ +E ++ + L G++ + D + YLHV++ KT L A Sbjct: 130 SLIVSDFGRELMKYHARTFQRLCLGQMHDILGPGATDDPIDFYLHVLREKTGSLIGTAAL 189 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + ++G + A+ ++G +LG+AFQ+ DDVLD R GK G D R+G TLPV Sbjct: 190 YGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDLRSTAAVSGKTPGADLRDGTKTLPV 249 Query: 239 IL-----AFQRGTKREKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQ 292 +L A + +++ K + +S + L + + E+R +T A ++ + Sbjct: 250 LLLEKSVAAGGASDADRHLMKMIGDHEALSADAALSEVVDRLAEHRVTRETAALAETWVE 309 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +A L LP+ + K +L E F Q++N Sbjct: 310 RALGHLAVLPEGAVKTALTE---FSRQQIN 336 >gi|160889241|ref|ZP_02070244.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492] gi|156861248|gb|EDO54679.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492] Length = 346 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 80/221 (36%), Positives = 122/221 (55%), Gaps = 7/221 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 V Y++ GGKR+RP+L L + Y+ D + A IE H TLLHDD++D + R Sbjct: 53 VTYVLSMGGKRIRPVLMLMAYNL--YQEDITRIFNPATGIEVYHNYTLLHDDLMDRADRR 110 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQL 148 RGK VW + ++L GD +L A+ + + + E ++ SL A + EG+ + Sbjct: 111 RGKETVHKVWDDNAAILSGDAMLVLAYQFMAQCPVEHLKEVMDIFSLTALEICEGQQLDM 170 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DV E+YL +I+ KT+VL +A+L++ +L+ G + + L +GMNLG+AFQL Sbjct: 171 EFEHRKDVKAEEYLEMIRLKTSVLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLK 230 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 DD LD G+ GKNIG D K T +I AF+ + + Sbjct: 231 DDFLDVYGDAAVFGKNIGGDILCNKKTYMLIKAFEHADEEQ 271 >gi|329765808|ref|ZP_08257374.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137651|gb|EGG41921.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 326 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/317 (26%), Positives = 162/317 (51%), Gaps = 7/317 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 K+ + VN + ++ + + + D +LI GGKRLRP + + + +L + A Sbjct: 9 KNAKIVNKYLNSKLKGNPKSLYDAASHLIVHGGKRLRPYMVIKSCQILGGNTATAMPAAS 68 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---- 125 A+E IH TL+HDD++D+ +R G +G ++L GD L S+A+ ++ E+ Sbjct: 69 AVEMIHNFTLVHDDIMDNDEMRHGVPTVHKKFGMPIAILAGDVLFSKAYQIISESNISKD 128 Query: 126 -SQEALEALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLI 183 + + + L+ + EG+L + +++ + T+++Y+ +I KTA LF + + ++ Sbjct: 129 STVQLVSRLAKACVDVCEGQLLDVKMAEGKRIPTQKEYIAMIGKKTAALFDVSCSMGAIC 188 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A L ++G NLGIAFQ+ DD++ G+ K +G D R GK +LP+++A + Sbjct: 189 ATNNQKDILNLSNFGKNLGIAFQITDDLIGVMGDSKITKKPVGNDLREGKKSLPILMAIK 248 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 ++ + K + +LK A +++ V+ +A Y + AK SL Sbjct: 249 LSKGKDHKIILKAFGNPKATKNDLKNAVDVIQSLGIEVEVRSQALKYAEMAKKSLSKY-S 307 Query: 304 SSWKKSLMEVVDFCLQR 320 K L++++DF ++R Sbjct: 308 GPAKTELIDLLDFVVKR 324 >gi|57167586|ref|ZP_00366726.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter coli RM2228] gi|57020708|gb|EAL57372.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter coli RM2228] Length = 275 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/279 (31%), Positives = 144/279 (51%), Gaps = 19/279 (6%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK+LR L LA A N + AIE IH A+LLHDD++D+S LRRG + + Sbjct: 8 GKKLRSKLLLAIA----GENANSYKICAAIELIHLASLLHDDIIDESKLRRGAKSVNAEF 63 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161 G + ++++GD L S+AF + + + A +S LA GEL + SK+ + ++ Y Sbjct: 64 GTKNALMLGDILYSKAFYELSQLDACFA-SIISDAVVKLAVGELMDVEFSKSFNADKDKY 122 Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 L +I +KTAVL A+ +++A + +A YG NLG+AFQ++DD+LD +G+ + Sbjct: 123 LKMIYNKTAVLIEASARCGAILANLD---EKAFGEYGKNLGLAFQMIDDILDIKGDEKTL 179 Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKN-----FWKSTINDGKISVENLKKAFIIMRE 276 GK DF+ GK TLP I ++ ++ F K ND KI ++ E Sbjct: 180 GKPAMNDFKEGKTTLPYIYLYENLNNEDRAQLKNLFQKDLNNDEKIWIQTK------FEE 233 Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 +AL A Y +A +++ + + + ++D Sbjct: 234 TKALNKAILEAKEYAHQAALAIKDFSNEKLQDIIQAMID 272 >gi|5631299|dbj|BAA82615.1| farnesyl, geranylgeranyl, geranylfarnesyl, hexaprenyl, heptaprenyl diphosphate synthase (SelF-HepPS) [Synechococcus elongatus] Length = 324 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/235 (36%), Positives = 126/235 (53%), Gaps = 10/235 (4%) Query: 20 LKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 + R E+ P + V+Y + SGGKRLRP++TL A + +A A+E +H Sbjct: 13 IARALDRTELPPILDEPVRYALASGGKRLRPLITLLAAEACGSSPADAAPVAAAVEILHN 72 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 TL+HDD++D S LRRG+ W + T++L GD ++ A+ ++ E E + L + Sbjct: 73 FTLIHDDIMDRSPLRRGRPTVYRAWDDATAILAGDTMMGIAYRLLSEHYPAEVCQHL-VA 131 Query: 137 ACTLAE-----GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 C+ A G+ L+ VT +DYL +I KTA LF+ A ++A + V Sbjct: 132 ECSSAFVDVCIGQAEDLAFRTMPSVTMDDYLRMIGRKTARLFATAAVAGGIVARAPHDVL 191 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 AL++YG LG+AFQ+ DDVLD G E GK +G+D R GK T P + A T Sbjct: 192 AALRTYGTALGMAFQIRDDVLDLFGS-PEFGKELGQDLREGKKTFPTLSAAAHAT 245 >gi|226493052|ref|NP_001145807.1| hypothetical protein LOC100279314 [Zea mays] gi|219884511|gb|ACL52630.1| unknown [Zea mays] Length = 428 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/323 (30%), Positives = 162/323 (50%), Gaps = 30/323 (9%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALM--LEYRGDNHVL---------- 66 + ++V + +Y G GKR RP +L +A+AL L + VL Sbjct: 109 VAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSESTEGRVLSILADKLRTR 168 Query: 67 ---LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A E IH A+LLHDDV+DD+ RRG + L+ GN+ SVL GDFLLS+A + Sbjct: 169 QQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNLIMGNKLSVLAGDFLLSRACVALAA 228 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E + ++ L GE Q+S S+ + E YL KTA L S + + +++ Sbjct: 229 LGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMEYYLQKTYYKTASLISNSCKAVAIL 288 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V YG NLG+AFQL+DDVLD+ G +GK D R+G T P++ A + Sbjct: 289 AGHTTEVSVLAHEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPMLYAME 348 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 E + ++ G + N++ A ++++R + T+ A + +A ++ LPD Sbjct: 349 -----EFPQLQEVVDRGFDNPANVEIALDYLQKSRGIEKTKELAREHADRAVKAIESLPD 403 Query: 304 S------SWKKSLMEVVDFCLQR 320 S + +++L+++ + + R Sbjct: 404 SDDEDVLTSRRALIDITERVITR 426 >gi|254556045|ref|YP_003062462.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum JDM1] gi|254044972|gb|ACT61765.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum JDM1] Length = 330 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 151/296 (51%), Gaps = 7/296 (2%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 I D + +I GGK LRP L + V LA ++E +HTATL+HDD+VDD+A Sbjct: 39 INDAILEMIHGGGKLLRPAYCLLFSQFTTTDRQRMVALAASLETLHTATLIHDDIVDDAA 98 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELR 146 LRR V + +G T+V GD+L F ++ S + +++ + + + + GE++ Sbjct: 99 LRRHHVTIQERFGKDTAVYAGDYLFVVVFKILAHYSS--SFKSIQMNSENMEKILVGEVQ 156 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 Q + +LD+T +YL I+ KTA LF+ + + + +G + Q + G+ +G+AFQ Sbjct: 157 QKNRHYHLDITMAEYLQQIQGKTAELFALSCFLGAYESGQSSHFAQRARKAGLAIGMAFQ 216 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 ++DD+LDY+ E GK I ED G T P+I A Q T+ + + G IS Sbjct: 217 ILDDILDYQEVSQETGKPILEDVAEGVYTSPLIFALQ--TEAKHDLLPLMRLQGAISDTQ 274 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 ++ ++ +V + A Y Q A +R LPD K L+ + L R N Sbjct: 275 RQEVQRLVINAGGVVQAQELATKYTQDALAIMRKLPDQPAKTDLISLTKRLLDRHN 330 >gi|257078168|ref|ZP_05572529.1| trans-hexaprenyltranstransferase [Enterococcus faecalis JH1] gi|256986198|gb|EEU73500.1| trans-hexaprenyltranstransferase [Enterococcus faecalis JH1] Length = 328 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 27/311 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 31 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 86 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 87 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 144 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 145 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGKI 204 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW---- 253 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE Sbjct: 205 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREVLLPLLMK 262 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLM 311 K T+ D E ++ + ++ E + + A Y +KA + LP++ K+ L Sbjct: 263 KETLTD-----EETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLY 317 Query: 312 EVVDFCLQRLN 322 E+ L R N Sbjct: 318 EITQTILTREN 328 >gi|224476589|ref|YP_002634195.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus carnosus subsp. carnosus TM300] gi|222421196|emb|CAL28010.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus carnosus subsp. carnosus TM300] Length = 318 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/311 (30%), Positives = 163/311 (52%), Gaps = 15/311 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLA 68 ++++K+ + I S ++ + +L+ SGGKR+RP + L++ + R ++ +A Sbjct: 8 REIKKIEKELKNTIKSSNPILEEASLHLLSSGGKRVRPSFVVLSSEYGVNPRNEDTYKIA 67 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 ++E IH ATL+HDDV+D S RRG++ W +T++L G++LL+ A + + + Sbjct: 68 VSLELIHMATLVHDDVIDRSDKRRGRLTISKKWDQETAILTGNYLLALALNNISSIQDKR 127 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 LS + GEL Q N + T +YL I KTA+L A E+ +L A Sbjct: 128 IHIILSNAIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLATELGALSANADL 187 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 LK G +G++FQ+VDDVLD+ ++GK +G D NG TLPV+L ++ + Sbjct: 188 KTANKLKRIGHYIGMSFQIVDDVLDFTSTEKQLGKPVGSDLMNGHLTLPVLLEARKNPQ- 246 Query: 249 EKNFWKSTINDGKISVENLKKAF----IIMRENRALVDTEYRAYSYGQKAK---DSLRCL 301 +K+ I +S ++ K+ F ++ + +++ ++ + Y KA D L Sbjct: 247 ----FKAIIES--LSPDSPKEDFEYCVNYIKSSDSIMQSKEISKQYLNKAIKILDELEIS 300 Query: 302 PDSSWKKSLME 312 P SSW K L++ Sbjct: 301 PASSWFKKLIK 311 >gi|326383002|ref|ZP_08204691.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL B-59395] gi|326198138|gb|EGD55323.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL B-59395] Length = 339 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/324 (28%), Positives = 153/324 (47%), Gaps = 16/324 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-A 68 + +++V L++ + S +++ + +L +GGKR RPM + ++ G + V+ A Sbjct: 21 ESLQRVEDLLISELSSGDDILVEAATHLAKAGGKRFRPMFAILSSHFGAKPGADEVITSA 80 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IE H ATL HDDV+D++ALRRG +A W N ++L GDFL ++A +V S Sbjct: 81 TVIEMTHLATLYHDDVMDEAALRRGAPSANARWSNSIAILAGDFLFARASHLV----STL 136 Query: 129 ALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 EA+ ++A T AE G++R+ D E YL V+ KT L + A + AG Sbjct: 137 GPEAVRIIADTFAELVTGQMRETVGVSAGDDPIEHYLKVVWEKTGSLIATAGRFGAYTAG 196 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + L G +G AFQ+ DD++D + GK G D R G TLPV+LA RG Sbjct: 197 ADETTVDTLARLGDVVGTAFQVSDDIIDIASVTGDSGKTPGTDLREGVHTLPVLLAL-RG 255 Query: 246 TKREKNFWKSTINDGKISVE-------NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 + + D + +A ++ ++ + + R + +A L Sbjct: 256 DGPDAARLTELLVDPATGAPRALTVDAEVDEALHLLVDSNGMKEARARLEAMADEANGLL 315 Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322 LPD + +V + + R+ Sbjct: 316 AGLPDGPANAAFSSLVRYTVDRVG 339 >gi|307565038|ref|ZP_07627551.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A] gi|307346207|gb|EFN91531.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A] Length = 324 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 10/228 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 +KY++ GGKR+RP+L L M Y+ D +L AC +E H TLLHDD++D + LR Sbjct: 31 IKYVLSLGGKRIRPVLMLLAYNM--YKDDPESILNQACGLETYHNYTLLHDDLMDSAPLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQL 148 RG W T++L GD +L AF + + L+ ++ A + EG+ + Sbjct: 89 RGHQTVHEKWNANTAILSGDTMLVLAFERITRGNPSCLKALLDLFTVTALEIGEGQQLDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE +Y+ +I+ KT+VL + AL++ +++ L +G +G+AFQL Sbjct: 149 EFEHRNDVTEAEYIEMIRLKTSVLLACALKMGAMLGNASEKDANNLYLFGEKIGLAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFW 253 DD LD G+ GK IG D + K T +I AF + T+++K N+W Sbjct: 209 DDYLDVYGDPYIFGKQIGGDIISNKKTYMLINAFNKATQKQKEELNYW 256 >gi|329572077|gb|EGG53747.1| polyprenyl synthetase [Enterococcus faecalis TX1467] Length = 305 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 27/311 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 8 DNQEIQFAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 63 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 64 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 121 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 122 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW---- 253 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE Sbjct: 182 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREVLLPLLMK 239 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLM 311 K T+ D E ++ + ++ E + + A Y +KA + LP++ K+ L Sbjct: 240 KETLTD-----EETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLY 294 Query: 312 EVVDFCLQRLN 322 E+ L R N Sbjct: 295 EITQTILTREN 305 >gi|289435279|ref|YP_003465151.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171523|emb|CBH28067.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 321 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 155/293 (52%), Gaps = 11/293 (3%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLLHDDVVD 86 E D +L+ +GGKR+RPM +A ++ V A AIE IH A+++HDDVVD Sbjct: 31 ETTSDAALHLLEAGGKRIRPMFVCLSARLVPTADFEMVRDASVAIELIHMASIVHDDVVD 90 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 D+ LRRG+ + WGN ++ GDFL +++ + E K A + LS V L+ GE+ Sbjct: 91 DADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSNVTVELSTGEIE 150 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 QL N D + +YL IK KTA+L +A+ + +++G S + L +G +G+AFQ Sbjct: 151 QLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGIVSGQSESDYEKLYRFGYYVGMAFQ 210 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 + DDVLD+ G E+GK GED R G TLPV A E +F K I+ E Sbjct: 211 ITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAM------EDSFLKKRISQVTEETEA 264 Query: 267 LKKAFIIMR-ENRALVDTEYRAYSYGQKAK---DSLRCLPDSSWKKSLMEVVD 315 + A ++ + E A +Y +KA DSL +P+ K ++ V+D Sbjct: 265 EEIAALVAEVKKTGAKKAEDVATAYLKKALATLDSLPQVPELKPLKQIVRVLD 317 >gi|191639239|ref|YP_001988405.1| Trans-hexaprenyltranstransferase, component II [Lactobacillus casei BL23] gi|190713541|emb|CAQ67547.1| Trans-hexaprenyltranstransferase, component II [Lactobacillus casei BL23] gi|327383318|gb|AEA54794.1| Polyprenyl synthetase [Lactobacillus casei LC2W] gi|327386501|gb|AEA57975.1| Polyprenyl synthetase [Lactobacillus casei BD-II] Length = 325 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 92/306 (30%), Positives = 158/306 (51%), Gaps = 8/306 (2%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 +I K+I ++ + + +I GGK LRP L + + + + LA AIE +HTA Sbjct: 23 MIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDVDREKMIALAAAIETLHTA 82 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV 136 TL+HDD++D S RR +V + +G T+V GD+L F ++ S +++ S Sbjct: 83 TLIHDDIIDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLSHYASSLRSIQQDSGS 142 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + +GEL Q++ +T +DYL + KT LF+ + + + +G + + + Sbjct: 143 MEKILKGELDQMATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYESGSSPTFAKNAEK 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW--K 254 GMN+GIAFQL+DD+LDY + + +GK + ED R+G + P+ILA QR + K Sbjct: 203 IGMNIGIAFQLLDDILDYTSDDDTLGKPVCEDVRSGVYSAPLILAMQRNRQAFLPLLAKK 262 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 I D ++ ++L+K I ++ +V A ++A L+ LP + + L+ + Sbjct: 263 DQITDAEM--DDLRKLVI---HHQGVVQAYAMAQKRTEQAIAGLQKLPAGAAQDDLIRLT 317 Query: 315 DFCLQR 320 L R Sbjct: 318 QSLLNR 323 >gi|307175359|gb|EFN65378.1| Decaprenyl-diphosphate synthase subunit 1 [Camponotus floridanus] Length = 337 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/300 (28%), Positives = 151/300 (50%), Gaps = 11/300 (3%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL------LACAIEFIHTATLLH 81 E + + Y + GK +RP+LT+ A + Y +VL +A E IH+++LLH Sbjct: 42 EELQPISTYYLDGQGKAIRPILTILMARAINYHKGRNVLSHSQRQIAMISEMIHSSSLLH 101 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DDV+D S +RRGK + +VW + + GD++L+ A M+ ++ E +S + L Sbjct: 102 DDVIDQSDIRRGKPSVNVVWSQKKVAMAGDYILAVACRMLSRLQNDEVTITISQIVTDLV 161 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 +GE QL + + YL KTA L + + +++A V + + + YG N+ Sbjct: 162 QGEFMQLGSKETENERFAHYLTKTYRKTASLIANCSKAVAILAEVDDHMIEMAFQYGRNV 221 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G+AFQLVDD+LD+ +GK D + G T PV+ A +R + + G Sbjct: 222 GLAFQLVDDLLDFVASSEALGKPTAADLKLGLATAPVLFACERYPELNAMIMRRFQEHG- 280 Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++K+AF ++ ++ L T + A + +A ++ S ++K+L+ + D + R+ Sbjct: 281 ----DVKRAFELVHKSNGLEQTRFLAKKHCAEANKIVQSFAKSPYQKALIIMADLVINRM 336 >gi|293191764|ref|ZP_06609288.1| decaprenyl diphosphate synthase [Actinomyces odontolyticus F0309] gi|292820457|gb|EFF79440.1| decaprenyl diphosphate synthase [Actinomyces odontolyticus F0309] Length = 337 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/325 (31%), Positives = 159/325 (48%), Gaps = 8/325 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RG- 61 LE +E V +L + S ++ ++ ++L +GGKR+RP+LTL A + E RG Sbjct: 13 LESRITPGLEVVERRLLDAVSSSRDLTDELTRHLAVAGGKRMRPLLTLVCAQLGEPERGL 72 Query: 62 DNHVLLAC-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D V+ A A+E H A+L HDDV+D + RRG +A+ +WGN ++L GD L ++A + Sbjct: 73 DEQVITAATAVELTHLASLYHDDVMDSAPTRRGVPSAQHLWGNNRAILAGDILFARA-SL 131 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + E + + L EG+L + + + YL V+ KT L S A Sbjct: 132 LVASLGPEMVAHHARTFERLCEGQLNETFGPTDGADRVDFYLQVLADKTGSLVSTAASFG 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L++G + + +G +G+AFQ+ DDVLD + GK G D R G TLPV+L Sbjct: 192 ALLSGAGQLMADVVSDFGEKVGVAFQIADDVLDLASSGEQSGKTPGTDLREGVDTLPVLL 251 Query: 241 AFQR---GTKREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 +R GT E G +S E L +R + L +T A ++ A Sbjct: 252 LRRREAAGTIDEAGARILRELTGDLSSDEALASVVEQLRSHDVLEETRELARTWANDAVA 311 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321 +L LP K +L + + RL Sbjct: 312 ALAPLPKGEAKTALEAFANLMVDRL 336 >gi|323344513|ref|ZP_08084738.1| polyprenyl synthetase [Prevotella oralis ATCC 33269] gi|323094640|gb|EFZ37216.1| polyprenyl synthetase [Prevotella oralis ATCC 33269] Length = 323 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 125/222 (56%), Gaps = 7/222 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 +KY++ GGKR+RP L L + Y+ D +L ACAIE H TLLHDD++D++A+R Sbjct: 30 IKYVLSLGGKRIRPTLMLLAYNL--YKDDPQSILSSACAIETYHNYTLLHDDLMDNAAIR 87 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACTLAEGELRQL 148 RG+ W T++L GD +L A+ + + +K +E ++ + A + EG+ + Sbjct: 88 RGRPTVHKKWDANTAILSGDSMLVLAYHYMAQCDGSKLKEVIDLFTETALEIGEGQQLDM 147 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE +Y+ +I+ KT+VL + +L++ +++AG L +G +G+AFQL Sbjct: 148 DFETRNDVTEAEYIEMIRLKTSVLLACSLKIGAILAGSSAEDADYLYRFGEQIGLAFQLQ 207 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 DD LD G+ GK IG D K T +I AF + + ++ Sbjct: 208 DDFLDVYGDTKVFGKAIGGDILCNKKTYMLINAFNKADRNQR 249 >gi|229552897|ref|ZP_04441622.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus LMS2-1] gi|258509306|ref|YP_003172057.1| geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG] gi|258540493|ref|YP_003174992.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus Lc 705] gi|229313766|gb|EEN79739.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus LMS2-1] gi|257149233|emb|CAR88206.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG] gi|257152169|emb|CAR91141.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus Lc 705] gi|259650587|dbj|BAI42749.1| geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG] Length = 325 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/314 (29%), Positives = 156/314 (49%), Gaps = 24/314 (7%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 LI K+I ++ + + +I GGK LRP L + + + + LA AIE +HTA Sbjct: 23 LIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDTDREKMIALAAAIETLHTA 82 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV 136 TL+HDD++D S RR +V + +G T+V GD+L F ++ S +++ S Sbjct: 83 TLIHDDIIDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLAHYASSLRSIQQDSGS 142 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + +GEL Q++ +T DYL + KT LF+ + V + +G + + + Sbjct: 143 MEKILKGELDQMATRYQTQITINDYLKQVSGKTGQLFALSCFVGAYESGGTTNFAKTAEK 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK------REK 250 GMN+GIAFQL+DD+LDY + +GK + ED R+G + P+ILA QR + +K Sbjct: 203 IGMNIGIAFQLLDDILDYTSDGETLGKPVYEDVRSGVYSAPLILAMQRDRQAFLPLLAKK 262 Query: 251 NFWKST----INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 T + D I E +K+A+ + ++ L A L+ LP + Sbjct: 263 EHISDTEMIQLRDLVIKYEGVKQAYTMAQQRTEL-------------ATAGLQKLPAGAA 309 Query: 307 KKSLMEVVDFCLQR 320 + L+ + + L+R Sbjct: 310 RDDLIRLTESLLKR 323 >gi|313632621|gb|EFR99606.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri FSL N1-067] Length = 324 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 154/293 (52%), Gaps = 11/293 (3%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLLHDDVVD 86 E D +L+ +GGKR+RPM +A ++ V A AIE IH A+++HDDVVD Sbjct: 34 ETTSDAALHLLEAGGKRIRPMFVCLSARLVPTADFEMVRDASVAIELIHMASIVHDDVVD 93 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 D+ LRRG+ + WGN ++ GDFL +++ + E K A + LS V L+ GE+ Sbjct: 94 DADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSNVTVELSTGEIE 153 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 QL N D + +YL IK KTA+L +A+ + +++G S + L +G +G+AFQ Sbjct: 154 QLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGIVSGQSESDYEKLYRFGYYVGMAFQ 213 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 + DDVLD+ G E+GK GED R G TLPV A E F K I+ E Sbjct: 214 ITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAM------EDPFLKKRISQVTEETET 267 Query: 267 LKKAFIIMR-ENRALVDTEYRAYSYGQKAK---DSLRCLPDSSWKKSLMEVVD 315 + A ++ + E A +Y +KA DSL +P+ K ++ V+D Sbjct: 268 EEIAALVAEVKKTGAKKAEDVATAYLKKALATLDSLPQVPELKPLKQIVRVLD 320 >gi|282881608|ref|ZP_06290277.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1] gi|281304594|gb|EFA96685.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1] Length = 324 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 73/220 (33%), Positives = 124/220 (56%), Gaps = 3/220 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP+L + + + + ++ ACAIE H TLLHDD++D + LRRG Sbjct: 31 IEYVLSLGGKRIRPILMMLAYNLYQEHPEEILMPACAIETYHNYTLLHDDLMDCADLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQLSL 150 W T++L GD +L A+ + ++ +E ++ + A + EG+ + Sbjct: 91 CATVHKRWDANTAILSGDSMLVLAYQRMATCRADYLKEVIDLFTQTALEIGEGQQYDMDF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 K DVTE++Y+ +I+ KT+VL + AL++ +++ G + L +G +G+AFQL DD Sbjct: 151 EKRDDVTEDEYIEMIRLKTSVLLACALKIGAILGGASQEDAENLYRFGEKIGLAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LD G+ GK IG D + K T +I AF T +++ Sbjct: 211 YLDVYGDTKVFGKAIGGDIISNKKTYMLINAFNLATPKQR 250 >gi|13541888|ref|NP_111576.1| octaprenyl diphosphate synthase [Thermoplasma volcanium GSS1] gi|14325322|dbj|BAB60226.1| farnesyl pyrophosphate synthase [Thermoplasma volcanium GSS1] Length = 326 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/319 (30%), Positives = 162/319 (50%), Gaps = 20/319 (6%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL----L 67 +E+VN + + + S+ + + KY I +GGKR RP+LT+ L E D+ L Sbjct: 15 IEEVNERLFEVVKSEEPDLDRMAKYTIEAGGKRFRPLLTI---LAFESSTDDPYFKILDL 71 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A E IHTA+L+HDD++DDS +RRG+ G +++V D+L ++A+ E S+ Sbjct: 72 AAGYELIHTASLIHDDIIDDSPMRRGRPTLSYKEGINNAIVVADYLFAKAY----ELGSR 127 Query: 128 EAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 + ++ + LAEG++ + NLD+TE+ Y +I++KTA F A ++++A Sbjct: 128 YGPLVSKVMADASSRLAEGQILEAVNLGNLDITEDTYYKIIENKTAHFFEACALGATIVA 187 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 R+ L ++ NLG+AFQ+ DD+LD G+ GK D ++ TLP+I A + Sbjct: 188 EADRPTREILSNFAFNLGMAFQVTDDILDIVGDDRYTGKPTFVDIKHDALTLPIIYALRN 247 Query: 245 GTKREKNFWKSTINDGK-ISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAKDSLRCLP 302 ++ IN + I+ LK F+ +D + A Y K+ D L+ Sbjct: 248 SNDNDRRAIIDMINGRREINKSLLKDIFL----KSGSIDYSFSVAKQYITKSMDYLKKAK 303 Query: 303 DSSWKKSLMEVVDFCLQRL 321 S LME+ + R+ Sbjct: 304 KSPDIDLLMELAFIVIDRI 322 >gi|254442381|ref|ZP_05055857.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] gi|198256689|gb|EDY80997.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] Length = 312 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/255 (30%), Positives = 137/255 (53%), Gaps = 2/255 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACA 70 M+ ++ ++++I I + Y I +GGKR+RP L + + + D V LA Sbjct: 1 MKALDAFLMEQISQFEPEIREHAAYSIDTGGKRIRPSLIFFSGWQNDGQVDEKLVRLAAV 60 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H ATL+HDD++D++ +RR + + N T+VL+GD L S A + + + E Sbjct: 61 VETVHLATLVHDDIMDEADIRRNRATVAKKYNNATAVLLGDALFSHAVYLATQFPTNEVC 120 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +++ + GE+ Q + D+ Y VI KTA LF + + + +AG ++S Sbjct: 121 RDIAVSMRQVCTGEILQTMQRGDPDLDMATYFRVIDLKTAELFRVSCHLGARLAGFEDSY 180 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 QA ++G +LGIA+Q+ DD+ D G ++GK +G D GKPT+P+IL R + Sbjct: 181 VQAAGAFGRHLGIAYQIYDDMTDLFGSQEKIGKTLGTDIATGKPTMPLILMRDRLPDDQA 240 Query: 251 NFWKSTINDGKISVE 265 + +++ GKI + Sbjct: 241 QLLRDSLS-GKIEAD 254 >gi|16329171|ref|NP_439899.1| solanesyl diphosphate synthase [Synechocystis sp. PCC 6803] gi|15214189|sp|P72580|PREA_SYNY3 RecName: Full=Prenyl transferase gi|14595182|dbj|BAA16579.2| solanesyl diphosphate synthase [Synechocystis sp. PCC 6803] Length = 323 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 154/296 (52%), Gaps = 18/296 (6%) Query: 35 KYLIFSGGKRLRPMLTL----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 ++L +GGKR+RP + L AT L E H LA E IHTA+L+HDDVVD++ L Sbjct: 38 EHLFEAGGKRVRPAIVLLVSRATLLDQELTA-RHRRLAEITEMIHTASLVHDDVVDEADL 96 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RR ++ N+ +VL GDFL +Q+ + + E ++ LS V AEGE+ Q Sbjct: 97 RRNVPTVNSLFDNRVAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEILQSIN 156 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + D E YL KTA L + + + + +++ V L YG +LG+AFQ+VDD Sbjct: 157 RFDTDTDLETYLEKSYFKTASLIANSAKAAGVLSDAPRDVCDHLYEYGKHLGLAFQIVDD 216 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR----GTKREKNFWKSTINDGKISVEN 266 +LD+ +GK G D +G T P + A ++ G E+ F ++ + Sbjct: 217 ILDFTSPTEVLGKPAGSDLISGNITAPALFAMEKYPLLGKLIEREFAQAG---------D 267 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 L++A ++ + + + A + Q A+ L L S+ ++SL+E+VD+ L RL+ Sbjct: 268 LEQALELVEQGDGIRRSRELAANQAQLARQHLSVLEMSAPRESLLELVDYVLGRLH 323 >gi|294794043|ref|ZP_06759180.1| putative heptaprenyl diphosphate synthase component II [Veillonella sp. 3_1_44] gi|294455613|gb|EFG23985.1| putative heptaprenyl diphosphate synthase component II [Veillonella sp. 3_1_44] Length = 323 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 1/247 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++++E + L D+E V + + E +++ L +GGKRLR L L A Sbjct: 7 LEIMERIAL-DLEHVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSI 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E +H ATL+HDDV+D + +RRG+ + GN+ ++L GD+L ++AF + Sbjct: 66 ERQRIKIAEAVEMLHLATLIHDDVLDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFKI 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + L+ S + L EGE Q+ +D E Y+ + KTA +E+ Sbjct: 126 VSEMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKTADFMEGCMELG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+ Q S LK YG LG+AFQ+ DD++DYR GK +G D R G T P++ Sbjct: 186 GLLGDWQESEIIELKKYGHALGMAFQITDDIMDYRETAETTGKPVGNDLREGLLTYPLLS 245 Query: 241 AFQRGTK 247 G K Sbjct: 246 IVNDGNK 252 >gi|28377861|ref|NP_784753.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum WCFS1] gi|300767848|ref|ZP_07077758.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180038|ref|YP_003924166.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270694|emb|CAD63600.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum WCFS1] gi|300494833|gb|EFK29991.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045529|gb|ADN98072.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum subsp. plantarum ST-III] Length = 330 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 150/296 (50%), Gaps = 7/296 (2%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 I D + +I GGK LRP L + V LA ++E +HTATL+HDD+VDD+A Sbjct: 39 INDAILEMIHGGGKLLRPAYCLLFSQFTTTDRQRMVALAASLETLHTATLIHDDIVDDAA 98 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELR 146 LRR V + +G T+V GD+L F ++ S + +++ + + + + GE++ Sbjct: 99 LRRHHVTIQERFGKDTAVYAGDYLFVVVFKILAHYSS--SFKSIQMNSENMEKILVGEVQ 156 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 Q +LD+T +YL I+ KTA LF+ + + + +G + Q + G+ +G+AFQ Sbjct: 157 QKDRHYHLDITMAEYLQQIQGKTAELFALSCFLGAYESGQSSHFAQRARKAGLAIGMAFQ 216 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 ++DD+LDY+ E GK I ED G T P+I A Q T+ + + G IS Sbjct: 217 ILDDILDYQEVSQETGKPILEDVAEGVYTSPLIFALQ--TEAKHDLLPLMRLQGAISDTQ 274 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 ++ ++ +V + A Y Q A +R LPD K L+ + L R N Sbjct: 275 RQEVQRLVINAGGVVQAQELATKYTQDALAIMRKLPDQPAKTDLISLTKRLLDRHN 330 >gi|312910738|ref|ZP_07769577.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516] gi|311289001|gb|EFQ67557.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516] Length = 305 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 8 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 63 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 64 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 121 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 122 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 182 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 238 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 239 KKEALTNEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEITQ 298 Query: 316 FCLQRLN 322 L R N Sbjct: 299 TILTREN 305 >gi|115402649|ref|XP_001217401.1| decaprenyl-diphosphate synthase subunit 1 [Aspergillus terreus NIH2624] gi|114189247|gb|EAU30947.1| decaprenyl-diphosphate synthase subunit 1 [Aspergillus terreus NIH2624] Length = 449 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 35/311 (11%) Query: 31 PDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVV 85 P ++ L P+++ + ++ GD ++L LA E IHTA+LLHDDV+ Sbjct: 151 PITAPSILADNNPDLNPLVSSSLEAKYDFTGDENILPTQRRLAEITELIHTASLLHDDVI 210 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D++ RR +A L +GN+ +VL GDFLL +A + + E E L+ V L EGE Sbjct: 211 DNAVTRRSSSSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANLVEGEF 270 Query: 146 RQLSLSKN----------LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 QL KN D T E YL KTA L S + ++L+ V ++ Sbjct: 271 MQL---KNTAADEKHPVFTDETIEYYLQKTYLKTASLISKSCRAAALLGDSTPEVVESAY 327 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 +YG NLG+AFQLVDD+LDY E+GK G D G T P++ A WK Sbjct: 328 AYGRNLGLAFQLVDDMLDYTVTDAELGKPAGADLELGLATAPLLFA-----------WKE 376 Query: 256 TINDGKISVENLKKAFIIMRENRALV------DTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + G + + + R +V T A Y KA ++ PDS K Sbjct: 377 SPELGPLVGRKFSQEGDVQRARELVVKCDGVEKTRQLAQEYADKAVAAISGFPDSEAKAG 436 Query: 310 LMEVVDFCLQR 320 L+++ + + R Sbjct: 437 LIQMCEKTMNR 447 >gi|291294791|ref|YP_003506189.1| Dimethylallyltranstransferase [Meiothermus ruber DSM 1279] gi|290469750|gb|ADD27169.1| Dimethylallyltranstransferase [Meiothermus ruber DSM 1279] Length = 319 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 153/291 (52%), Gaps = 11/291 (3%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLH 81 + S+VE + + + L+ +GGKR+RP L + L G + + LA A+E +H+A+LLH Sbjct: 25 VRSEVEFVRLIEEDLVTAGGKRVRPRLVFLASNALG--GVPYAMELALAVELLHSASLLH 82 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DD+VDD+ RRGK AA +GN SVL GD+LLS+ ++ +T E + + A L+ Sbjct: 83 DDLVDDAETRRGKEAAFRKYGNAVSVLSGDYLLSRLMALLAQTGRMELVAMFAETARQLS 142 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 E E+ Q ++ D + E+Y +I KTA + A E ++++ + R+AL +G Sbjct: 143 EAEVLQFQVAALHDYSLENYERIIDGKTASVMRVACEGAAVLGDAPPAEREALARFGSFY 202 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN--FWKSTIND 259 G AFQ+ DD LD G +GK G D R GK TL + L E F + Sbjct: 203 GQAFQMRDDYLDLMGTAEVLGKPAGGDVREGKVTL-ITLRLLEAYPEEVGAIFKRRAAKP 261 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 G I+ L++ + +R L TE A +A +LR LP S+++ L Sbjct: 262 GDIA--RLQE--LAVRSGADLEVTEAIAARV-DRAIAALRALPHSAYRDEL 307 >gi|145608148|ref|XP_360800.2| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|145015645|gb|EDK00135.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 364 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 92/261 (35%), Positives = 135/261 (51%), Gaps = 12/261 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + + Sbjct: 107 LAEITELIHTASLLHDDVIDHSESRRGSPSANLEFGNKMAVLGGDFLLGRASVALARLRD 166 Query: 127 QEALEALSLVACTLAEGELRQL---SLSKNLDVTEED----YLHVIKSKTAVLFSAALEV 179 E E L+ V L EGE QL S ++ V ED YL KTA L S + Sbjct: 167 AEVTELLATVIANLVEGEFMQLKNTSRDESRPVWSEDALTYYLQKTYLKTASLISKSCRA 226 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+L+ G A ++G NLG+AFQLVDD+LDY ++GK G D G T P++ Sbjct: 227 SALLGGADAQTVDAAYAFGKNLGLAFQLVDDMLDYTVSAVDLGKPAGADLELGLATAPLL 286 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ + + + +G ++ +A I+ + + T A Y ++A +++ Sbjct: 287 FAWKNHPELGELVGRKFSKEGDVA-----RAREIVLASDGIEQTRALAQRYAEQAIEAIS 341 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 PDS K L+E+ L+R Sbjct: 342 HFPDSEAKDGLIEMAAKTLKR 362 >gi|312214262|emb|CBX94255.1| hypothetical protein [Leptosphaeria maculans] Length = 941 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 92/263 (34%), Positives = 136/263 (51%), Gaps = 12/263 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RR +A + +GN+ +VL GDFLL +A + + Sbjct: 200 LAEITELIHTASLLHDDVIDHSVSRRSAPSANIEFGNKMAVLAGDFLLGRASVALARLRD 259 Query: 127 QEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVIKSKTAVLFSAALEV 179 E E L+ V L EGE QL + N TEE YL K+A L S + Sbjct: 260 PEVTELLATVIANLVEGEFMQLKNTARDETNPQWTEETVSYYLQKTYLKSASLISKSCRA 319 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++++ G + V +A YG NLG+AFQLVDD+LDY E+GK G D G T P++ Sbjct: 320 AAILGGSSDDVVEASYLYGKNLGLAFQLVDDMLDYTVSGEELGKPAGADLELGLATAPLL 379 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ + + +G ++++A I+ ++ L T A Y KA ++ Sbjct: 380 FAWKEDESLGRLVGRKFSGEG-----DVQRARDIVSQSSGLEQTRALAQEYVDKAIAAIS 434 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 PDS K+ L+E+ ++R N Sbjct: 435 FFPDSEAKQGLVEMCTKVMKRRN 457 >gi|282859641|ref|ZP_06268743.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010] gi|282587559|gb|EFB92762.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010] Length = 324 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 83/241 (34%), Positives = 130/241 (53%), Gaps = 5/241 (2%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +KY++ GGKR+RP+L L + + ++ + AC +E H TLLHDD++D++ LRRG Sbjct: 31 IKYVLSLGGKRIRPVLMLLAYNLYKDNPEDILAQACGLETYHNYTLLHDDLMDNAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----SLVACTLAEGELRQLS 149 W ++L GD +L AF I + L+AL ++ A + EG+ + Sbjct: 91 HQTVHEKWNANAAILSGDTMLVLAFER-IASGDPAQLKALLNLFTVTALEIGEGQQLDME 149 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 DVTE +Y+ +I+ KT+VL + AL++ +++A + L +G +G+AFQL D Sbjct: 150 FEHRNDVTEAEYIEMIRLKTSVLLACALKMGAILAEASEEDARNLYIFGEKIGLAFQLQD 209 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D LD G+ + GK IG D + K T +I AF + TK ++N S IN E K Sbjct: 210 DYLDVYGDPSVFGKQIGGDIISNKKTYMLINAFNKATKEQRNELVSWINKESFKAEEKVK 269 Query: 270 A 270 A Sbjct: 270 A 270 >gi|257452495|ref|ZP_05617794.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_5R] gi|317059036|ref|ZP_07923521.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_5R] gi|313684712|gb|EFS21547.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_5R] Length = 316 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 3/208 (1%) Query: 40 SGGKRLRPMLTLATALM---LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 + GK R L L A + E + + LA +E H A+L+HDD+VDDS RRGK++ Sbjct: 32 ASGKMFRTKLLLFCASLGPCYEEKKEKLCKLAAMVELTHLASLIHDDIVDDSPYRRGKIS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 + +G +V GDFL+++ + + E+ LS + GE+ Q DV Sbjct: 92 IQGKYGKDAAVYAGDFLMARIYYYEAVERLNESAALLSKTVEHMCTGEIGQDLCRYREDV 151 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + E+Y I+ KTA LF A + ++ AG + + LK +G NLG+ FQL DD+LD+ Sbjct: 152 SVEEYFQNIQGKTAALFETACHIGAMEAGCSQEMIEKLKLFGRNLGMMFQLKDDILDFTS 211 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQR 244 ++E+GK +DF+NG T PVI+A Q+ Sbjct: 212 NMDEIGKETHKDFQNGIYTFPVIMALQQ 239 >gi|227517154|ref|ZP_03947203.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX0104] gi|229547906|ref|ZP_04436631.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 29200] gi|307288086|ref|ZP_07568100.1| polyprenyl synthetase [Enterococcus faecalis TX0109] gi|227075377|gb|EEI13340.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX0104] gi|229306927|gb|EEN72923.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 29200] gi|306500928|gb|EFM70244.1| polyprenyl synthetase [Enterococcus faecalis TX0109] Length = 328 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 31 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 86 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 87 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 144 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 145 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 204 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 205 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 261 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 262 KKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKVQAKEQLYEITQ 321 Query: 316 FCLQRLN 322 L R N Sbjct: 322 TILTREN 328 >gi|195624250|gb|ACG33955.1| decaprenyl-diphosphate synthase subunit 1 [Zea mays] Length = 428 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 99/323 (30%), Positives = 162/323 (50%), Gaps = 30/323 (9%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALM--LEYRGDNHVL---------- 66 + ++V + +Y G GKR RP +L +A+AL L + VL Sbjct: 109 VAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSESTEGRVLSILADKLRTR 168 Query: 67 ---LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A E IH A+LLHDDV+DD+ RRG + L+ GN+ SVL GDFLLS+A + Sbjct: 169 QQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNLIMGNKLSVLAGDFLLSRACVALAA 228 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E + ++ L GE Q+S S+ + E YL KTA L S + + +++ Sbjct: 229 LGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMEYYLQKTYYKTASLISNSCKAVAIL 288 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V YG NLG+AFQL+DDVLD+ G +GK D R+G T P++ A + Sbjct: 289 AGHTTEVSVLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPMLYAME 348 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 E + ++ G + N++ A ++++R + T+ A + +A ++ LPD Sbjct: 349 -----EFPQLQEVVDRGFDNPANVEIALDYLQKSRGIEKTKELAREHADRAVKAIESLPD 403 Query: 304 S------SWKKSLMEVVDFCLQR 320 S + +++L+++ + + R Sbjct: 404 SDDEDVLTSRRALIDITERVITR 426 >gi|256960580|ref|ZP_05564751.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Merz96] gi|293384419|ref|ZP_06630300.1| polyprenyl synthetase [Enterococcus faecalis R712] gi|312906571|ref|ZP_07765571.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512] gi|256951076|gb|EEU67708.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Merz96] gi|291078267|gb|EFE15631.1| polyprenyl synthetase [Enterococcus faecalis R712] gi|310627219|gb|EFQ10502.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512] Length = 328 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 31 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 86 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 87 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 144 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 145 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 204 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 205 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 261 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 262 KKEALTNEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEITQ 321 Query: 316 FCLQRLN 322 L R N Sbjct: 322 TILTREN 328 >gi|118475154|ref|YP_891862.1| polyprenyl synthetase [Campylobacter fetus subsp. fetus 82-40] gi|118414380|gb|ABK82800.1| polyprenyl synthetase [Campylobacter fetus subsp. fetus 82-40] Length = 294 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 84/227 (37%), Positives = 129/227 (56%), Gaps = 12/227 (5%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 S GK+LR L L A E L+ +E IH A+LLHDDV+DDS +RRGK + Sbjct: 28 SSGKKLRSKLILKIAGASE----ASFKLSSVVEIIHLASLLHDDVIDDSLIRRGKPSINA 83 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 ++G + S+++GD L S+ F +++ + A + +S C L+ GEL + L + + +E Sbjct: 84 IFGTKNSIMLGDILYSKGFNEIVKFDMKIA-DIISDAVCKLSIGELMDVELGSSFNADKE 142 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 YL +I KTAVL AA + ++++AG Q YG NLG+AFQ+VDD+LD + Sbjct: 143 KYLKMIYFKTAVLIEAAAKSAAILAGFD---EQKYGDYGKNLGLAFQIVDDILDITSDEK 199 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKRE----KNFWKSTINDGKI 262 +GK DF+ GK TLP I +++ + KN +K ++D +I Sbjct: 200 TLGKPAMNDFKEGKTTLPYIYLYEKLENEDKAILKNLFKKELDDNEI 246 >gi|307283879|ref|ZP_07564052.1| polyprenyl synthetase [Enterococcus faecalis TX0860] gi|306503529|gb|EFM72776.1| polyprenyl synthetase [Enterococcus faecalis TX0860] gi|315147034|gb|EFT91050.1| polyprenyl synthetase [Enterococcus faecalis TX4244] Length = 305 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 8 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 63 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 64 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 121 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 122 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 182 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 238 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 239 KKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEITQ 298 Query: 316 FCLQRLN 322 L R N Sbjct: 299 TILTREN 305 >gi|255974147|ref|ZP_05424733.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T2] gi|256617997|ref|ZP_05474843.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 4200] gi|257083089|ref|ZP_05577450.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Fly1] gi|257417357|ref|ZP_05594351.1| trans-hexaprenyltranstransferase [Enterococcus faecalis AR01/DG] gi|257418078|ref|ZP_05595072.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T11] gi|300861510|ref|ZP_07107594.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11] gi|255967019|gb|EET97641.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T2] gi|256597524|gb|EEU16700.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 4200] gi|256991119|gb|EEU78421.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Fly1] gi|257159185|gb|EEU89145.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ARO1/DG] gi|257159906|gb|EEU89866.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T11] gi|300848971|gb|EFK76724.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11] gi|315144088|gb|EFT88104.1| polyprenyl synthetase [Enterococcus faecalis TX2141] Length = 328 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 31 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 86 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 87 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 144 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 145 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 204 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 205 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 261 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 262 KKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEITQ 321 Query: 316 FCLQRLN 322 L R N Sbjct: 322 TILTREN 328 >gi|70726445|ref|YP_253359.1| heptaprenyl diphosphate syntase component II [Staphylococcus haemolyticus JCSC1435] gi|68447169|dbj|BAE04753.1| heptaprenyl diphosphate syntase component II [Staphylococcus haemolyticus JCSC1435] Length = 318 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 87/279 (31%), Positives = 152/279 (54%), Gaps = 9/279 (3%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL 67 +K++EK + K I S+ ++ + +L+ SGGKR+RP + L++ + + ++ + Sbjct: 10 IKNVEK---RLQKAIESNDPILREASSHLLSSGGKRVRPAFVILSSQFGPQKKTEDTYRV 66 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+ + E + Sbjct: 67 AVALELIHMATLVHDDVIDKSDKRRGRLTIVKKWDVTTAILTGNFLLALGLEHLSEIRDN 126 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +S + GEL Q N + + +YL I KTA+L A EV ++ + Sbjct: 127 RIHHIISNSIVNVGLGELFQFQDQFNSEQSITNYLRRINRKTALLIQLATEVGAITSEAN 186 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + LK G +G++FQ+VDD+LD+ ++GK +G D NG TLPV+L ++ T Sbjct: 187 DETIRKLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPVLLEMKKDTS 246 Query: 248 REKNF----WKSTINDGKISVENLKKAFIIMRENRALVD 282 +K +S + K +E ++ ++ I +E++A+ D Sbjct: 247 FKKKIAALNHQSESQEFKPLIEQIRNSYSI-KESKAISD 284 >gi|295114543|emb|CBL33180.1| Geranylgeranyl pyrophosphate synthase [Enterococcus sp. 7L76] Length = 323 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 26 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 81 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 82 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 139 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 140 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 199 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 200 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 256 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 257 KKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEITQ 316 Query: 316 FCLQRLN 322 L R N Sbjct: 317 TILTREN 323 >gi|294784835|ref|ZP_06750123.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_27] gi|294486549|gb|EFG33911.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_27] Length = 326 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 112/211 (53%), Gaps = 3/211 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GK LR L L A + D+ LA +E H A+L+HDD+VDDS RRGKV+ + Sbjct: 42 GKMLRSKLLLLCAFLGSNWKDHKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQ 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +G +V GDFL+++ F EA+ LS + GE+ Q D++E Sbjct: 102 GKYGKDAAVFAGDFLIARIFYYGAMENLNEAVSILSKTVEYMCIGEIEQDLCRYQEDISE 161 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + Y I+ KTA LF AA + + AG + Q LK + NLG+ FQL DD+LD+ Sbjct: 162 KKYFENIERKTAALFQAASYIGAKEAGCSEEIIQKLKLFVKNLGLMFQLKDDILDFTSNS 221 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 E+GK +DF+NG T PVI+A + RE Sbjct: 222 KELGKETHKDFQNGIYTFPVIMALKNPKARE 252 >gi|21283088|ref|NP_646176.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus MW2] gi|49486309|ref|YP_043530.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MSSA476] gi|21204528|dbj|BAB95224.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus MW2] gi|49244752|emb|CAG43188.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MSSA476] Length = 319 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 92/315 (29%), Positives = 155/315 (49%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 9 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 68 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 69 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 128 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 129 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDK 188 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 189 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 246 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ +++ + Y KA D + Sbjct: 247 ----------DFKLKIEQLRRDSDRKEFEECIQIIRKSDSINESKAVSSKYLSKALDLIS 296 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 297 ELPDGHPKSLLLSLT 311 >gi|256760927|ref|ZP_05501507.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T3] gi|256682178|gb|EEU21873.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T3] Length = 328 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 31 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 86 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 87 HDDIVDEADTRRGLPTLRSHFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 144 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 145 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 204 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 205 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 261 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 262 KKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEITQ 321 Query: 316 FCLQRLN 322 L R N Sbjct: 322 TILTREN 328 >gi|319400819|gb|EFV89038.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus epidermidis FRI909] Length = 319 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 8/240 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV----- 65 +++KV + + I S + + D +L+ SGGKR+RP + + ++ +N Sbjct: 9 EIKKVEKRLEEAIISSDQTLQDASFHLLSSGGKRVRPAFVILSG---QFGSNNKTSEDTY 65 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+ + E Sbjct: 66 RVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEIS 125 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +S + GEL Q N + T +YL I KTA+L + +V ++ + Sbjct: 126 DTRVHTTISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSN 185 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 N V + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV+L ++ Sbjct: 186 ASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPVLLEMRKN 245 >gi|270339768|ref|ZP_06005968.2| polyprenyl synthetase [Prevotella bergensis DSM 17361] gi|270333767|gb|EFA44553.1| polyprenyl synthetase [Prevotella bergensis DSM 17361] Length = 325 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 81/244 (33%), Positives = 133/244 (54%), Gaps = 12/244 (4%) Query: 19 ILKRICSDVEMIP---------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 IL++I S +E +P + VKY++ GGKR+RP L L + + ++ ++ A Sbjct: 8 ILQKINSFIEQLPYDRTPAALYEPVKYVLSMGGKRIRPTLMLLGYNLYKDDPESILMQAV 67 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKS 126 +E H TLLHDD++D++ LRRG W +VL GD +L A+ +++ K Sbjct: 68 GLETYHNYTLLHDDLMDNADLRRGHETVHKKWNANQAVLSGDSMLVLAYQRMMDCPVDKL 127 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ L + A + EG+ + DV+E++Y+ +I+ KT+VL + AL++ +++AG Sbjct: 128 EKVLGLFTETALEIGEGQQYDIDFEMRNDVSEDEYIEMIRLKTSVLLACALKIGAILAGA 187 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 S L +G +G+AFQL DD LD G+ GK IG D + K T +I AF R Sbjct: 188 SPSDADKLYKFGEKMGLAFQLQDDYLDVYGDEKVFGKAIGGDITSNKKTYMLINAFNRAN 247 Query: 247 KREK 250 + +K Sbjct: 248 EEQK 251 >gi|313125957|ref|YP_004036227.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase [Halogeometricum borinquense DSM 11551] gi|312292322|gb|ADQ66782.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase [Halogeometricum borinquense DSM 11551] Length = 348 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/317 (31%), Positives = 166/317 (52%), Gaps = 23/317 (7%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--------EYR-------GDNHVLLAC 69 +D E + + +YL+ +GGKRLRP +TL TA L +YR D V+ A Sbjct: 32 ADPERLYEATRYLLEAGGKRLRPTVTLLTAEALADAEPLSEDYRSFPALDGADIDVMAAA 91 Query: 70 -AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-- 126 +IE I + TL+HDD++DD LRRG A + +T++L GD L ++AF + +T + Sbjct: 92 VSIEVIQSFTLIHDDIMDDDDLRRGVPAVHKEYDTETAILAGDTLYAKAFEFMTQTGADP 151 Query: 127 QEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 Q LEA+ L+A T + EG+ + + +V ++YL +++ KTAVL+ AA + ++ Sbjct: 152 QNGLEAVRLLATTCTKICEGQALDVEFERRTEVLPDEYLEMVELKTAVLYGAAAATAGVL 211 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G + +AL YG++ G AFQ+ DDVLD ++GK G D K TL + A Q Sbjct: 212 MGADDETVEALYRYGIDSGCAFQIQDDVLDLTVPSEKLGKQRGSDLVENKETLITLHARQ 271 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 +G E T+ ++ +++ A + + ++ +A +AK L LPD Sbjct: 272 QGVNVEDLVAADTVE--GVTEDDIDAAVAELNKVGSIDYARDKAQELTDRAKRHLEVLPD 329 Query: 304 SSWKKSLMEVVDFCLQR 320 + + L ++ D+ + R Sbjct: 330 NDARSLLADISDYLISR 346 >gi|313893153|ref|ZP_07826730.1| polyprenyl synthetase [Veillonella sp. oral taxon 158 str. F0412] gi|313442506|gb|EFR60921.1| polyprenyl synthetase [Veillonella sp. oral taxon 158 str. F0412] Length = 323 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 127/239 (53%), Gaps = 1/239 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++++E + L D+E V + + E +++ L +GGKRLR L L A Sbjct: 7 LEIMERIAL-DLEGVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSV 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E +H ATL+HDDV+D + +RRG+ + GN+ ++L GD+L ++AF + Sbjct: 66 ERQRIRIAEAVEMLHLATLIHDDVLDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFQI 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + L+ S + L EGE Q+ +D E Y+ + KTA +E+ Sbjct: 126 VSEMPNMKYLQIFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKTADFMEGCMELG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 L+ G S LK YG LG+AFQ+ DD++DYR GK +G D R G T P++ Sbjct: 186 GLLGGWSESEIVELKKYGHALGMAFQITDDIMDYRETTETTGKPVGNDLREGLLTYPLL 244 >gi|227555199|ref|ZP_03985246.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis HH22] gi|307292276|ref|ZP_07572139.1| polyprenyl synthetase [Enterococcus faecalis TX0411] gi|312905555|ref|ZP_07764669.1| polyprenyl synthetase [Enterococcus faecalis TX0635] gi|227175657|gb|EEI56629.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis HH22] gi|306496691|gb|EFM66245.1| polyprenyl synthetase [Enterococcus faecalis TX0411] gi|310631284|gb|EFQ14567.1| polyprenyl synthetase [Enterococcus faecalis TX0635] gi|315162309|gb|EFU06326.1| polyprenyl synthetase [Enterococcus faecalis TX0645] gi|315574620|gb|EFU86811.1| polyprenyl synthetase [Enterococcus faecalis TX0309B] gi|315576540|gb|EFU88731.1| polyprenyl synthetase [Enterococcus faecalis TX0630] Length = 305 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 8 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 63 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 64 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 121 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 122 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 182 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 238 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 239 KKEALTDEETQEIYRLVHELGGVEKAQELATHYTEKALKEISKLPETKAQAKEQLYEITQ 298 Query: 316 FCLQRLN 322 L R N Sbjct: 299 TILTREN 305 >gi|159898866|ref|YP_001545113.1| polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|159891905|gb|ABX04985.1| Polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 326 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 94/311 (30%), Positives = 152/311 (48%), Gaps = 2/311 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 D++ V I++R+ S +I ++++ SGGKRLR M+ L + + YR + + A Sbjct: 16 HDLQAVEDRIMQRVESQSALITAAGQHIVSSGGKRLRAMMVLLASQLGRYRLSDSLHAAT 75 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+E IH A+L+HDD+VDD+ RRGKV W +++VGD+L + A + Sbjct: 76 AVELIHAASLVHDDLVDDADRRRGKVTVHAKWDQGVALMVGDYLFAVAAGEMALAPDPRV 135 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ + T++ EL + + E Y I KTA LF AA + G Sbjct: 136 IQIFAESVMTISASELHPVMATLPTATALEQYYAKIGGKTAALFEAAAAAGVVCGGGSPE 195 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +A YG ++G+AFQ+VDD+LD+ +GK G D R G TLP+ILA + E Sbjct: 196 EIEAAARYGYDIGLAFQIVDDILDFVSTEETLGKPAGNDLREGTITLPLILAVK--DHHE 253 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 ++S E + +A +++ + +A Q+ +L P S K+ Sbjct: 254 HPLVNLLDQYEQLSDEQVTQAISQVKQLGGIDQAIAQAREITQRGLAALDIFPPSDAKEL 313 Query: 310 LMEVVDFCLQR 320 L E+ D+ L R Sbjct: 314 LREIADYVLDR 324 >gi|284040578|ref|YP_003390508.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74] gi|283819871|gb|ADB41709.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74] Length = 323 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 120/222 (54%), Gaps = 5/222 (2%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP+LTL A + V A +E H TL+HDD++D + LRRG Sbjct: 30 IRYIMSLGGKRMRPLLTLMGAYLFTDDWRKAVRPALGVEVFHNFTLMHDDIMDQAPLRRG 89 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAEGELRQLSL 150 + W ++L GD +L A+ +++ ++ + AL S A + EG+ ++ Sbjct: 90 QPTVHEKWNGNIAILSGDVMLVNAYQLMLNVEADKLAVALARFSRTAAEVCEGQQMDMNF 149 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DV+E +Y+ +I+ KT+VL +LE+ LI G L GMN+G+ FQL DD Sbjct: 150 ETRWDVSEAEYIDMIRLKTSVLLGYSLELGGLIGGADEETNLHLYEGGMNIGVGFQLKDD 209 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRGTKREK 250 +LD G+ + GK +G D K T +I LA +G R++ Sbjct: 210 LLDVYGDPAKFGKQVGGDIIANKKTFLLIEALAQAKGPLRDE 251 >gi|29377703|ref|NP_816857.1| heptaprenyl diphosphate synthase, component II, putative [Enterococcus faecalis V583] gi|256854910|ref|ZP_05560274.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T8] gi|257080330|ref|ZP_05574691.1| trans-hexaprenyltranstransferase [Enterococcus faecalis E1Sol] gi|257091474|ref|ZP_05585835.1| trans-hexaprenyltranstransferase [Enterococcus faecalis CH188] gi|307274532|ref|ZP_07555713.1| polyprenyl synthetase [Enterococcus faecalis TX2134] gi|29345171|gb|AAO82927.1| heptaprenyl diphosphate synthase, component II, putative [Enterococcus faecalis V583] gi|256710470|gb|EEU25514.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T8] gi|256988360|gb|EEU75662.1| trans-hexaprenyltranstransferase [Enterococcus faecalis E1Sol] gi|257000286|gb|EEU86806.1| trans-hexaprenyltranstransferase [Enterococcus faecalis CH188] gi|306508804|gb|EFM77893.1| polyprenyl synthetase [Enterococcus faecalis TX2134] gi|315580811|gb|EFU93002.1| polyprenyl synthetase [Enterococcus faecalis TX0309A] Length = 328 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 31 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 86 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 87 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 144 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 145 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 204 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 205 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 261 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 262 KKEALTDEETQEIYRLVHELGGVEKAQELATHYTEKALKEISKLPETKAQAKEQLYEITQ 321 Query: 316 FCLQRLN 322 L R N Sbjct: 322 TILTREN 328 >gi|199598547|ref|ZP_03211964.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus HN001] gi|199590589|gb|EDY98678.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus HN001] Length = 325 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 156/308 (50%), Gaps = 12/308 (3%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 LI K+I ++ + + +I GGK LRP L + + + + LA AIE +HTA Sbjct: 23 LIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDTDREKMIALAAAIETLHTA 82 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV 136 TL+HDD++D S RR +V + +G T+V GD+L F ++ S +++ S Sbjct: 83 TLIHDDIIDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLAHYASSLRSIQQDSGS 142 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + +GEL Q++ +T DYL + KT LF+ + + + +G + + + Sbjct: 143 MEKILKGELDQMATRYQTQITINDYLKQVSGKTGQLFALSCFIGAYESGGTTNFAKTAEK 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 GMN+GIAFQL+DD+LDY + +GK + ED R+G + P+ILA QR + F Sbjct: 203 IGMNIGIAFQLLDDILDYTSDGETLGKPVYEDVRSGVYSAPLILAMQRD---RQAFLPLL 259 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD----SLRCLPDSSWKKSLME 312 + IS + I +R+ + +AY+ Q+ D L+ LP + + L+ Sbjct: 260 VKKEHISDTEM----IQLRDLVIKYEGVKQAYTMAQQRTDLATAGLQKLPAGAARDDLIR 315 Query: 313 VVDFCLQR 320 + + L+R Sbjct: 316 LTESLLKR 323 >gi|194467708|ref|ZP_03073695.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23] gi|194454744|gb|EDX43641.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23] Length = 326 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/321 (30%), Positives = 157/321 (48%), Gaps = 24/321 (7%) Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH--------- 64 KVN I RI + D ++ + +GGK LRP A L + NH Sbjct: 18 KVNQTINDRITIKNTQLHDALQQMASNGGKYLRP------AFFLLFANINHQTAAEQEKL 71 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + +A ++E +H ATL+HDD++DDS RRG V+ + +G T+V GDFL + F +++ET Sbjct: 72 IKIASSLEVLHMATLIHDDIIDDSPKRRGAVSVQAAFGKDTAVYTGDFLFTIFFDLLVET 131 Query: 125 KSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + L+ A T+ + GEL Q+ +LD + DY + KTA +FS A E + Sbjct: 132 MTGSPY--LTRNARTMRKILTGELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLAAEEGA 189 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 K G N+GI+FQ++DD+LDY G+ + K + ED G +LP++L Sbjct: 190 YFGHGDRRTINLAKRIGQNIGISFQILDDILDYSGD-ERLNKPVLEDLATGVYSLPLLLT 248 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q ++++E+++K I+ + + + A + QKA+ + L Sbjct: 249 LQ---NHRHELEPLLAKKRQMTIEDMEKVQKIVVTHGGVKKAQEIATKFTQKAQTEIDQL 305 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 D +K L V D L R+N Sbjct: 306 ADKHTRKMLKLVADKLLTRVN 326 >gi|294792178|ref|ZP_06757326.1| octaprenyl-diphosphate synthase [Veillonella sp. 6_1_27] gi|294457408|gb|EFG25770.1| octaprenyl-diphosphate synthase [Veillonella sp. 6_1_27] Length = 323 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 81/247 (32%), Positives = 129/247 (52%), Gaps = 1/247 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++++E + L D+E+V + + E +++ L +GGKRLR L L A Sbjct: 7 LEIMERIAL-DLERVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSI 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E +H ATL+HDDV+D + +RRG+ + GN+ ++L GD+L ++AF + Sbjct: 66 ERQRIKIAEAVEMLHLATLIHDDVLDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFKI 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + L+ S + L EGE Q+ +D E Y+ + KTA +E+ Sbjct: 126 VSEMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKTADFMEGCMELG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+ Q LK YG LG+AFQ+ DD++DYR GK +G D R G T P++ Sbjct: 186 GLLGDWQEDEIIELKKYGHALGMAFQITDDIMDYRETAETTGKPVGNDLREGLLTYPLLS 245 Query: 241 AFQRGTK 247 G K Sbjct: 246 IVNDGNK 252 >gi|297207871|ref|ZP_06924304.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911956|ref|ZP_07129399.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus TCH70] gi|296887445|gb|EFH26345.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886202|gb|EFK81404.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus TCH70] Length = 332 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 92/315 (29%), Positives = 155/315 (49%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 22 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 81 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 82 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 141 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 142 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDK 201 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 202 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 259 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ +++ + Y KA D + Sbjct: 260 ----------DFKLKIEQLRRDSDRKEFEECIQIIRKSDSINESKAVSSKYLSKALDLIS 309 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 310 ELPDGHPKSLLLSLT 324 >gi|149369615|ref|ZP_01889467.1| putative isoprenoid biosynthesis related protein [unidentified eubacterium SCB49] gi|149357042|gb|EDM45597.1| putative isoprenoid biosynthesis related protein [unidentified eubacterium SCB49] Length = 324 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 144/293 (49%), Gaps = 11/293 (3%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GGKRLRP+LTL TA + + A A+E H +L+HDD++DD+ LRRGKV Sbjct: 33 YILELGGKRLRPVLTLMTAEFFGSTIEKAMNAALAVELFHNFSLIHDDIMDDAPLRRGKV 92 Query: 96 AARLVWGNQTSVLVGDFLL---SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 W T +L GD +L Q F K Q+ + S A + EG+ + Sbjct: 93 TVHEKWDLNTGILSGDAMLILAYQLFEGYEAEKFQQLAKLFSKTALEVCEGQQYDVDFET 152 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 DVT +Y+ +I KTAVL AA+++ +++A ++ + + +G NLGIAFQL DD L Sbjct: 153 RDDVTIPEYIKMIDFKTAVLIGAAMKMGAIVAEASDACKDNIYEFGRNLGIAFQLQDDYL 212 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVENLK 268 D G+ GK IG D K T + A +R + E+ + + D ++ +K Sbjct: 213 DAFGDPETFGKQIGGDIIVNKKTFLYLTALERCSPSEREQLTTLFSQSPEDPSEKIKIVK 272 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV-DFCLQR 320 FI A + + Y KA D L + S KK + D+ L+R Sbjct: 273 DLFISTGAAEA---SMIKMEKYTAKANDFLEKIDFSEDKKEAFKSFGDWLLKR 322 >gi|329731320|gb|EGG67686.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 21193] Length = 319 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 92/315 (29%), Positives = 155/315 (49%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 9 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 68 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 69 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 128 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 129 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 188 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 189 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 246 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ +++ + Y KA D + Sbjct: 247 ----------DFKLKIEQLRRDSDRKEFEECIQIIRKSDSINESKAVSSKYLSKALDLIS 296 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 297 ELPDGHPKSLLLSLT 311 >gi|116873372|ref|YP_850153.1| heptaprenyl diphosphate synthase component II [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742250|emb|CAK21374.1| heptaprenyl diphosphate synthase component II [Listeria welshimeri serovar 6b str. SLCC5334] Length = 321 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 105/300 (35%), Positives = 154/300 (51%), Gaps = 23/300 (7%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV 84 E D +L+ +GGKR+RPM +A L D + + AIE IH A+++HDDV Sbjct: 30 AETTSDTALHLLEAGGKRIRPMFVCLSA-RLSPDADFGAVKNASVAIELIHMASIVHDDV 88 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VDD+ LRRG+ + WGN ++ GDFL +++ + E K A + LS V L+ GE Sbjct: 89 VDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGE 148 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + QL N D + +YL IK KTA+L +A+ + +++G + Q L +G +G+A Sbjct: 149 IEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGIVSGQSEADYQKLYRFGYYVGMA 208 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI------- 257 FQ+ DDVLD+ G E+GK GED R G TLPV A E F K I Sbjct: 209 FQITDDVLDFVGSEKELGKPAGEDLRQGNVTLPVFFAM------EDPFLKKRICQVTEET 262 Query: 258 --NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + VE +KK+ E+ + T Y + G DSL +P+ K ++ V+D Sbjct: 263 PAEEIAALVEEVKKSGAKKAED---IATAYLKKAVGML--DSLPQVPELKPLKQIVRVLD 317 >gi|289704598|ref|ZP_06501030.1| polyprenyl synthetase [Micrococcus luteus SK58] gi|289558678|gb|EFD51937.1| polyprenyl synthetase [Micrococcus luteus SK58] Length = 354 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 92/309 (29%), Positives = 150/309 (48%), Gaps = 29/309 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-------------LACAIEFIHTATL 79 +L+ +GGKR+RP+LT+ +L+ GD + A +E H ATL Sbjct: 52 AAHHLLAAGGKRVRPVLTVLASLL----GDPALASGEVADVDAPARQAAVVMELTHLATL 107 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 HDDV+D++ +RRG AA +WGN ++L GD + ++A ++ E + + + A T Sbjct: 108 YHDDVMDEAPVRRGAPAAHRLWGNSAAILAGDLIFARASQLMAELGPRP----VQIQADT 163 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L +G+L + E Y V+ KT L +AA + +L+ G + Q + + Sbjct: 164 FERLVQGQLWETRGPAEGADPIEHYYAVLSGKTGSLIAAAGMLGALLGGADEAAVQVMSA 223 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL----AFQRGTKREKNF 252 YG +G+AFQL DD++D G+ +GK G D R PTL +L A G + E Sbjct: 224 YGEKVGLAFQLADDLIDLTGDAERIGKVPGTDLRERVPTLTTLLLARAAQGEGPEAEDAR 283 Query: 253 WKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + DG + E L A + + A+ + + ++AK +L LPDS+ K +L Sbjct: 284 RVRALVDGPLDTDEQLTAAVAALTGHPAIDEAWAITRDWAEQAKQALTPLPDSAVKTALE 343 Query: 312 EVVDFCLQR 320 D+ + R Sbjct: 344 AFADYVVGR 352 >gi|315172839|gb|EFU16856.1| polyprenyl synthetase [Enterococcus faecalis TX1346] Length = 305 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 8 DNHEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 63 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 64 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 121 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 122 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 182 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 238 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 239 KKEALTNEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKAQAKEQLYEITQ 298 Query: 316 FCLQRLN 322 L R N Sbjct: 299 TILTREN 305 >gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF] gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF] Length = 295 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 81/227 (35%), Positives = 132/227 (58%), Gaps = 15/227 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + D ++Y IF+GGKRLRP++ +AT + + + + ACA+E IHT +L+HDD+ +DD Sbjct: 32 VIDAMRYSIFAGGKRLRPIVAIATYNLFKDNLEEVLPYACALEMIHTYSLIHDDLPAMDD 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQ-------EALEALSLVACT 139 RRGK+ V+G ++L GD LL+ AF M+ ++Q +A+E ++ A Sbjct: 92 DNYRRGKLTNHKVYGEGIAILAGDALLNYAFEIMISHARTQSNANVHLQAIEEIAKAAGM 151 Query: 140 --LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + G++ L S +K +D +Y+H +KTA L +A +V ++IA + + S Sbjct: 152 NGMIGGQVVDLESENKQVDKNTLNYIHY--NKTAALIISAFKVGAIIAEATETDIAHMNS 209 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G N+G+AFQ+ DD+LD G+ ++GK+IG D N K T P + Q Sbjct: 210 LGKNIGLAFQIQDDILDIIGDEKKLGKDIGSDVENNKSTYPSLYGLQ 256 >gi|315163581|gb|EFU07598.1| polyprenyl synthetase [Enterococcus faecalis TX1302] Length = 305 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 157/307 (51%), Gaps = 19/307 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 8 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 63 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 64 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 121 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL + KTA LF+ + V + +G + Sbjct: 122 EKVLTGELGQMDNRYNFEVTIDQYLKNVSGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 182 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 238 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVD 315 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 239 KKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALKEISKLPETKVQAKEQLYEITQ 298 Query: 316 FCLQRLN 322 L R N Sbjct: 299 TILTREN 305 >gi|254777013|ref|ZP_05218529.1| GrcC1 [Mycobacterium avium subsp. avium ATCC 25291] Length = 335 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 98/321 (30%), Positives = 166/321 (51%), Gaps = 16/321 (4%) Query: 8 TLKD-MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 T++D + ++ L+ + S +++ +++ +L +GGKR RP+ T+ +A + V Sbjct: 21 TVRDGVGRIEQLMDTELRSADDIMTELLTHLFKAGGKRFRPLFTVLSAQIGPDPDAAEVT 80 Query: 67 LACA-IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A IE +H ATL HDDV+D++ +RRG A + WGN ++L GD+L + A +V Sbjct: 81 IAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGDYLFATASRLV---- 136 Query: 126 SQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 S+ EA+ L+A T A+ G++R+ K E YL V+ KTA L +AA ++ Sbjct: 137 SRLGPEAVQLIAETFAQLVTGQMRETRGRKEGSDPIEHYLKVVYEKTACLIAAAGRFGAM 196 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G + L G +G AFQ+ DD++D + +E GK G D R G TLP++ A Sbjct: 197 FSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPGTDVREGVHTLPMVYAL 256 Query: 243 QRG---TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + R + I+D ++ E A ++R + + + Y +A L Sbjct: 257 REPGPDAARLRELLVGPIDDDEVVAE----ALTLLRASPGMAKAKQSLREYAAQAHRELD 312 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LPD +++L +VDF + R Sbjct: 313 QLPDVPGRRALQTLVDFTISR 333 >gi|325269799|ref|ZP_08136409.1| polyprenyl synthetase [Prevotella multiformis DSM 16608] gi|324987772|gb|EGC19745.1| polyprenyl synthetase [Prevotella multiformis DSM 16608] Length = 324 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 123/222 (55%), Gaps = 7/222 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 ++Y++ GGKR+RP L L + + +R D +L ACA+E H TLLHDD++DD+ LR Sbjct: 31 IRYVLSLGGKRIRPTLMLLSYNL--FRDDPETILSPACALETYHNYTLLHDDLMDDAPLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQL 148 RG+ + W T++L GD +L AF + + + + L L T + EG+ + Sbjct: 89 RGQQTVHVRWDANTAILSGDSMLVLAFERMQQCDDRHLRDVLRLFTVTALEIGEGQQYDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE +Y+ +I+ KT+VL + A+++ +++A + L +G +G+AFQL Sbjct: 149 EFEHRNDVTEAEYIEMIRLKTSVLLACAMKIGAILADAPSEDMDNLYKFGEQIGLAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 DD LD G+ GK IG D + K T +I A + R++ Sbjct: 209 DDYLDVYGDPKVFGKKIGGDITSNKKTYMLINALNKANARQR 250 >gi|255531531|ref|YP_003091903.1| polyprenyl synthetase [Pedobacter heparinus DSM 2366] gi|255344515|gb|ACU03841.1| Polyprenyl synthetase [Pedobacter heparinus DSM 2366] Length = 322 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 117/199 (58%), Gaps = 3/199 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP+LTL A + E + A AIE H TL+HDD++D++ LRRG Sbjct: 31 IRYIMSMGGKRIRPVLTLMAADLFEADILKAIPAALAIETFHNFTLVHDDIMDNAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQA---FCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 K WG ++L GD ++ +A M+ ++ALE + A + EG+ + Sbjct: 91 KQTVHEKWGINNAILSGDVMMVEANKQLSMLHSAILKDALETFNATARGVCEGQQLDMEF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + V+ +Y+++I+ KTAVL A+++ + +AG ++ + L +G+NLGIAFQL DD Sbjct: 151 EQQAIVSIPEYINMIRLKTAVLLGGAMKLGAQVAGADHNEAEQLYQFGLNLGIAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDF 229 +LD G+ + GK +G D Sbjct: 211 ILDVYGDPEKFGKQVGGDI 229 >gi|118463064|ref|YP_883710.1| polyprenyl synthetase [Mycobacterium avium 104] gi|118164351|gb|ABK65248.1| polyprenyl synthetase [Mycobacterium avium 104] Length = 325 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 98/321 (30%), Positives = 166/321 (51%), Gaps = 16/321 (4%) Query: 8 TLKD-MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 T++D + ++ L+ + S +++ +++ +L +GGKR RP+ T+ +A + V Sbjct: 11 TVRDGVGRIEQLMDTELRSADDIMTELLTHLFKAGGKRFRPLFTVLSAQIGPDPDAAEVT 70 Query: 67 LACA-IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A IE +H ATL HDDV+D++ +RRG A + WGN ++L GD+L + A +V Sbjct: 71 IAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGDYLFATASRLV---- 126 Query: 126 SQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 S+ EA+ L+A T A+ G++R+ K E YL V+ KTA L +AA ++ Sbjct: 127 SRLGPEAVQLIAETFAQLVTGQMRETRGRKEGSDPIEHYLKVVYEKTACLIAAAGRFGAM 186 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G + L G +G AFQ+ DD++D + +E GK G D R G TLP++ A Sbjct: 187 FSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPGTDVREGVHTLPMVYAL 246 Query: 243 QRG---TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + R + I+D ++ E A ++R + + + Y +A L Sbjct: 247 REPGPDAARLRELLVGPIDDDEVVAE----ALTLLRASPGMAKAKQSLREYAAQAHRELD 302 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LPD +++L +VDF + R Sbjct: 303 QLPDVPGRRALQTLVDFTISR 323 >gi|303313007|ref|XP_003066515.1| Decaprenyl-diphosphate synthase , putative [Coccidioides posadasii C735 delta SOWgp] gi|240106177|gb|EER24370.1| Decaprenyl-diphosphate synthase , putative [Coccidioides posadasii C735 delta SOWgp] Length = 472 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 92/272 (33%), Positives = 141/272 (51%), Gaps = 17/272 (6%) Query: 61 GDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 GD ++L LA E IHTA+LLHDDV+D++ RR +A L +GN+ +VL GDFLL Sbjct: 204 GDVNILPSQRRLAEITELIHTASLLHDDVIDNAVTRRSVASANLEFGNKMAVLAGDFLLG 263 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEE---DYLHVIKSK 168 +A + + E E L+ V L EGE QL + +N TE+ YL K Sbjct: 264 RASVALARLRDPEVTELLATVIANLVEGEFMQLKNTAQDERNPAWTEDIIAYYLQKTYLK 323 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 +A L S + ++L+ V +A +YG NLG+AFQLVDD+LDY E+GK G D Sbjct: 324 SASLISKSCRAAALLGQTAPEVVEAAYTYGRNLGLAFQLVDDMLDYTISGEELGKPAGAD 383 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288 G T P++ A++ + + ++G + + A I+ ++ L T A Sbjct: 384 LELGLATAPLLFAWRSHPELGALVGRKFCHEGDVQL-----ARQIVAQSDGLEQTRALAQ 438 Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 Y KA +++ PDS K+ L+++ + + R Sbjct: 439 EYADKAVEAISIFPDSEAKRGLIDMCEKVMTR 470 >gi|296133204|ref|YP_003640451.1| Polyprenyl synthetase [Thermincola sp. JR] gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR] Length = 299 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 89/264 (33%), Positives = 138/264 (52%), Gaps = 22/264 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I ++Y + +GGKRLRP+L LA A + + ACAIE IHT +L+HDD+ + Sbjct: 33 ETIHQSMRYSMLAGGKRLRPVLVLAAAEAVGGDVKKVIPAACAIEMIHTYSLIHDDLPAM 92 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIET-----KSQEALEALSLV 136 DD RRGK +V+G ++L GD LL+ AF +V E K ++ +SL Sbjct: 93 DDDNYRRGKPTNHVVYGEAIAILAGDALLTLAFEVLSSLVEEPGIDPQKVLRVIKEISLA 152 Query: 137 ACT--LAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 A + L G++ + S+NLD++ E Y+H+ KT LF AAL+ ++++ Sbjct: 153 AGSRGLIGGQVVDIG-SENLDISAETLKYIHI--HKTGALFKAALKTGAILSSASEEQIT 209 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 AL Y LG+ FQ+ DD+LD G+ ++GK +G D + K T P I Q K Sbjct: 210 ALSRYAHFLGLGFQITDDILDIEGDTEKLGKPVGSDIKKKKATYPSIFGLQEA----KQM 265 Query: 253 WKSTINDGKISVENLKKAFIIMRE 276 + + + +S+E + +RE Sbjct: 266 AREAVAESLMSLEGFDERADFLRE 289 >gi|319443088|ref|ZP_07992244.1| putative polyprenyl diphosphate synthase [Corynebacterium variabile DSM 44702] Length = 338 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 94/325 (28%), Positives = 151/325 (46%), Gaps = 11/325 (3%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL---MLEYR 60 L D + M +V + + + + D V++L +GGKR RPM L + E Sbjct: 19 LNDFIAEGMTRVESTLQDSLSTGESFLTDKVQHLALAGGKRFRPMFALLASRYGSTPETA 78 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 V A +E H ATL HDDV+D++ RRG +A W N ++L GDF+ + A + Sbjct: 79 AQTVVNAAVVVELTHLATLYHDDVMDEADRRRGSESANARWDNSVAILAGDFIFAVASSI 138 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + E + + L G++R+ + + Y+ VI+ KT VL ++A + Sbjct: 139 MADL-GPETVRHFAETFGELVTGQMRETVGCPEGEDPVDHYMTVIQEKTGVLIASAGFLG 197 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S+ G R AL +G +LG FQ+VDD++D + E GK G D R G TLPV+ Sbjct: 198 SMHGGAPVEQRDALFRFGRHLGQVFQIVDDIIDVWSDPEESGKTPGTDLREGVFTLPVLY 257 Query: 241 AFQR---GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 A + G +R ++ + D + E L R+L D E Y + Sbjct: 258 AMREQTPGGERLRDILTGPVTDDALVDEALTLIRASDGRERSLADVE----RYRDLGEAE 313 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 L LP++ +L ++++ L RL Sbjct: 314 LALLPENPVTTALRRLMNYSLARLG 338 >gi|38233043|ref|NP_938810.1| putative polyprenyl diphosphate synthase component [Corynebacterium diphtheriae NCTC 13129] gi|38199302|emb|CAE48933.1| Putative polyprenyl diphosphate synthase component [Corynebacterium diphtheriae] Length = 330 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 94/318 (29%), Positives = 159/318 (50%), Gaps = 16/318 (5%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACA 70 M +V L+ + + + + + V +L +GGKR RPM L A+ + +N + A Sbjct: 22 MIRVEDLLREELSKGEDFLVEKVMHLAEAGGKRFRPMFALLASQYGSQPMSENVIKAAVV 81 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E H ATL HDDV+D++ RRG +A W N ++L GD LL+ ++ + + Sbjct: 82 VEMTHLATLYHDDVMDEADKRRGVDSANFRWNNSVAILAGDILLAHVARLMADL----GV 137 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 E ++ + T AE G++R+ +++ D E YL+VI KT VL ++A + S+ AG Sbjct: 138 ETVAHFSETFAELVTGQMRETIGARDGDPIEH-YLNVINEKTGVLIASAGFLGSMHAGAS 196 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT- 246 +AL++YG +G+ FQ+VDD++D + + GK G D R G TLPV+ A T Sbjct: 197 AEHVEALRAYGRAIGMVFQIVDDIIDIFSDTTDSGKTPGTDLREGVFTLPVLYALSEDTA 256 Query: 247 --KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + ++ + D L RAL D + Y ++A+ L LP + Sbjct: 257 VGEELRSILTGPLTDDATVAHALDLLARSTGRERALADV----HRYLEEAERQLALLPQN 312 Query: 305 SWKKSLMEVVDFCLQRLN 322 S +L + + ++R+ Sbjct: 313 STTDALRSLAHYTVKRVG 330 >gi|62955289|ref|NP_001017656.1| decaprenyl-diphosphate synthase subunit 1 [Danio rerio] gi|62202649|gb|AAH93175.1| Prenyl (decaprenyl) diphosphate synthase, subunit 1 [Danio rerio] Length = 411 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 153/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L KD++ + I +++ + + Y GK RPM+ + A + + Sbjct: 94 LVQKDLQNIYDDIKQQLLVSKAELKALCDYYFDGKGKAFRPMIVILMARACNVHSNKEGV 153 Query: 67 L-------ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 L A E IHTA+L+HDDV+DDS RRGK VWG + ++L GDF+LS A Sbjct: 154 LLPAQRSIAMISEMIHTASLVHDDVIDDSDKRRGKNTINNVWGERKAILAGDFILSAASM 213 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + LS V L GE QL +N + + YL KTA L + + + Sbjct: 214 ALARIGNTTVVSVLSQVIEDLVRGEFMQLGSKENENERFKHYLEKTFKKTASLIANSCKA 273 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQLVDD+LD+ N +GK D + G T PV+ Sbjct: 274 VSILVNSDPEVHEIAYQYGRNVGIAFQLVDDILDFTSNANCLGKPSAADLKLGLATGPVL 333 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + +DG ++ +A+ + ++ + T Y A Y Q+A + Sbjct: 334 FACQQFPELHSMIMRRFSSDG-----DVDRAWQYVLKSDGVEQTNYLAQHYCQEAIRQIS 388 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L SS + +L+ + + L+R Sbjct: 389 RLRPSSERDALIRLTELVLRR 409 >gi|242242749|ref|ZP_04797194.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis W23144] gi|242233885|gb|EES36197.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis W23144] Length = 332 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 8/240 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----V 65 +++KV + + I S + + D +L+ SGGKR+RP + + ++ +N Sbjct: 22 EIKKVEKRLEEAIISSDQTLQDASFHLLSSGGKRVRPAFVILSG---QFGSNNKPSEDTY 78 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+ + E Sbjct: 79 RVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKYLSEIS 138 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +S + GEL Q N + T +YL I KTA+L + +V ++ + Sbjct: 139 DTRVHTTISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSN 198 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 N V + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV+L ++ Sbjct: 199 ASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPVLLEMRKN 258 >gi|320036615|gb|EFW18554.1| hexaprenyl pyrophosphate synthetase [Coccidioides posadasii str. Silveira] Length = 472 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 92/272 (33%), Positives = 141/272 (51%), Gaps = 17/272 (6%) Query: 61 GDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 GD ++L LA E IHTA+LLHDDV+D++ RR +A L +GN+ +VL GDFLL Sbjct: 204 GDVNILPSQRRLAEITELIHTASLLHDDVIDNAVTRRSVASANLEFGNKMAVLAGDFLLG 263 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEE---DYLHVIKSK 168 +A + + E E L+ V L EGE QL + +N TE+ YL K Sbjct: 264 RASVALARLRDPEVTELLATVIANLVEGEFMQLKNTAQDERNPAWTEDIIAYYLQKTYLK 323 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 +A L S + ++L+ V +A +YG NLG+AFQLVDD+LDY E+GK G D Sbjct: 324 SASLISKSCRAAALLGQTAPEVVEAAYTYGRNLGLAFQLVDDMLDYTISGEELGKPAGAD 383 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288 G T P++ A++ + + ++G + + A I+ ++ L T A Sbjct: 384 LELGLATAPLLFAWRSHPELGALVGRKFCHEGDVQL-----ARQIVAQSDGLEQTRALAQ 438 Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 Y KA +++ PDS K+ L+++ + + R Sbjct: 439 EYADKAVEAISIFPDSEAKRGLIDMCEKVMTR 470 >gi|309812382|ref|ZP_07706137.1| polyprenyl synthetase [Dermacoccus sp. Ellin185] gi|308433687|gb|EFP57564.1| polyprenyl synthetase [Dermacoccus sp. Ellin185] Length = 342 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 92/289 (31%), Positives = 142/289 (49%), Gaps = 8/289 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L D + +E+VN + + D ++ + +L+ +GGKR RPMLTL T+++ D Sbjct: 26 LSDRLVDGLERVNARLDVVVDHDSPLVREASHHLVDAGGKRFRPMLTLLTSMLGTGISDE 85 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 V A +E H A+L HDDV+D++ +RRG +A V+GN T++L+GD L +A ++ Sbjct: 86 VVDAAAGVELTHLASLYHDDVMDEADIRRGVPSANAVYGNSTAILIGDLLFGKASELIAH 145 Query: 124 TKSQEA-LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + L+A + V L G++ + + E YL V+ KT VL +AA + ++ Sbjct: 146 LGPEAVILQARTFV--RLCAGQIEDERQTPDGADPMEYYLKVLADKTGVLIAAAAQYGAM 203 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP---VI 239 +G + L YG +G+ FQL DD+LD E GK G D R G TLP V Sbjct: 204 FSGCDERTVEVLGRYGELVGLVFQLSDDILDIASEAETSGKTPGTDLREGVATLPTFYVN 263 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLK--KAFIIMRENRALVDTEYR 286 + R K + D E L+ +A M + RA T R Sbjct: 264 ASSDPADARLKALLARPLTDDAEHAEALELLRAHPAMEQARAHTLTTAR 312 >gi|116327301|ref|YP_797021.1| geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332078|ref|YP_801796.1| geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120045|gb|ABJ78088.1| Geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125767|gb|ABJ77038.1| Geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 319 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 129/233 (55%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I D++++ ++ Y I SGGKRLRP+L +L Y G + + + +E IH A+LLHD Sbjct: 22 IREDLKILSEIKTYTIRSGGKRLRPILHYCLCQLLGYSGKHWLDVGAIVELIHAASLLHD 81 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DVVD++ RRG+ + +GN+T++L GD+LL+ + + E ++ + V L+ Sbjct: 82 DVVDEAETRRGQQSVGSKFGNKTAILAGDYLLACGIDHLNDLGYPELMDIFTQVIKDLSI 141 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 EL Q+ KN +T + Y + KT+ LF A + +++ + ++ L+ +G++LG Sbjct: 142 SELIQMEWEKNPKITLDIYNKIAYGKTSSLFGAVGVSAGILSDKNDKEKKKLRQFGIDLG 201 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 FQ DD +DY ++ GK +DF NG T P++L + K +K S Sbjct: 202 SFFQKKDDAIDYFTPASKSGKVPLKDFYNGLYTYPILLLLDQADKNDKKLIHS 254 >gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678] gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678] Length = 294 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 128/225 (56%), Gaps = 15/225 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y +GGKRLRP+L + + + +G ++ A AIE IHT +L+HDD+ +D+ L Sbjct: 35 AMNYSYKAGGKRLRPILIMESYKLCGGKGSEYLPYAAAIEMIHTYSLIHDDLPALDNDDL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-TLAEGE----- 144 RRGK V+G ++L GD LL+ A+ +++ + + ++ AC +A+G Sbjct: 95 RRGKKTNHKVFGEAMAILAGDGLLNYAYEVILNHALNSSDQPSAIKACKAIADGAGIYGM 154 Query: 145 -----LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + S SK +D+ D++H+ +KTA + A ++ + +AG + + L++YG Sbjct: 155 VGGQVVDVESESKEIDLACLDFIHL--NKTAAMIVACMKSGAYLAGADDDTVEKLEAYGR 212 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+AFQ+ DD+LD G+ E+GKN+G D N K T P IL +R Sbjct: 213 YLGLAFQIADDILDIEGDEKELGKNVGSDIENDKATYPHILGMER 257 >gi|119192214|ref|XP_001246713.1| hypothetical protein CIMG_00484 [Coccidioides immitis RS] Length = 472 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 92/272 (33%), Positives = 141/272 (51%), Gaps = 17/272 (6%) Query: 61 GDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 GD ++L LA E IHTA+LLHDDV+D++ RR +A L +GN+ +VL GDFLL Sbjct: 204 GDVNILPSQRRLAEITELIHTASLLHDDVIDNAVTRRSVASANLEFGNKMAVLAGDFLLG 263 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEE---DYLHVIKSK 168 +A + + E E L+ V L EGE QL + +N TE+ YL K Sbjct: 264 RASVALARLRDPEVTELLATVIANLVEGEFMQLKNTAQDERNPAWTEDIIAYYLQKTYLK 323 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 +A L S + ++L+ V +A +YG NLG+AFQLVDD+LDY E+GK G D Sbjct: 324 SASLISKSCRAAALLGQTAPEVVEAAYTYGRNLGLAFQLVDDMLDYTISGEELGKPAGAD 383 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288 G T P++ A++ + + ++G + + A I+ ++ L T A Sbjct: 384 LELGLATAPLLFAWRSHPELGALVGRKFCHEGDVQL-----ARQIVAQSDGLEQTRALAQ 438 Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 Y KA +++ PDS K+ L+++ + + R Sbjct: 439 EYADKAVEAISIFPDSEAKRGLIDMCEKVMTR 470 >gi|118469870|ref|YP_885527.1| bifunctional short chain isoprenyl diphosphate synthase [Mycobacterium smegmatis str. MC2 155] gi|118171157|gb|ABK72053.1| bifunctional short chain isoprenyl diphosphate synthase [Mycobacterium smegmatis str. MC2 155] Length = 329 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 91/297 (30%), Positives = 161/297 (54%), Gaps = 9/297 (3%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVD 86 E++ + V++L +GGKR RP+ T+ +A + V +A A IE +H ATL HDDV+D Sbjct: 36 ELMAEAVQHLFQAGGKRFRPLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDVMD 95 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---G 143 ++ +RRG +A WGN ++L GD+L + A +V S+ +A+ ++A T A+ G Sbjct: 96 EAQMRRGAQSANARWGNNIAILAGDYLFATASRLV----SRLGPDAVRVIADTFAQLVTG 151 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 ++R+ + + + + YL V+ KTA L +A+ + +G + + L G +G Sbjct: 152 QMRETRGAADHVDSVDHYLKVVYEKTACLIAASGRFGATFSGANDEQIERLSRLGGIVGT 211 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQ+ DD++D + +E GK G D R G TLPV+ A R T + + + + Sbjct: 212 AFQIADDIIDIDSDPDESGKTPGTDLREGVHTLPVLYAL-RETGPDADRLRELLAGPIER 270 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E++ +A ++R + L + SY +A++ L LP+ +++L +VD+ + R Sbjct: 271 DEDVAEALALLRRSPGLTKAKETVASYAAQAREELSHLPECPGRQALAVLVDYTISR 327 >gi|57242131|ref|ZP_00370071.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter upsaliensis RM3195] gi|57017323|gb|EAL54104.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter upsaliensis RM3195] Length = 297 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 87/225 (38%), Positives = 127/225 (56%), Gaps = 20/225 (8%) Query: 42 GKRLRPMLTLATALMLEYRGDNH--VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GK+LR L L+ A G++ +L IE IH A+LLHDD++D+S LRRG + Sbjct: 30 GKKLRSKLLLSIA------GESQKAYVLCAIIELIHLASLLHDDIIDESELRRGARSINA 83 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVACTLAEGELRQLSLSKNLDVT 157 +G + ++++GD L S+AF E QEA + LS C LA GEL ++LSK + Sbjct: 84 EFGAKNALMLGDILYSKAF---YELSKQEAKISQILSNAVCKLAIGELMDVNLSKKFNPD 140 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 +E YL +I KTAVL A+ +L+A + + A YG NLG+AFQ+VDD+LD G+ Sbjct: 141 KEAYLTMIYHKTAVLIEASARCGALLAKLNEN---AFAEYGKNLGLAFQIVDDILDITGD 197 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE----KNFWKSTIN 258 +GK DF+ GK TL I ++ + + KN +K +N Sbjct: 198 EATLGKPALSDFKEGKTTLAYIYLYESLNENDKKILKNLFKKDLN 242 >gi|281423539|ref|ZP_06254452.1| polyprenyl synthetase [Prevotella oris F0302] gi|281402359|gb|EFB33190.1| polyprenyl synthetase [Prevotella oris F0302] Length = 323 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 124/228 (54%), Gaps = 6/228 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D VKY++ GGKR+RP+L L + + + ++ ++ ACA+E H TLLHDD++D++ +R Sbjct: 28 DPVKYVLSMGGKRIRPVLMLLSYGLFKDDVESVLMPACALETYHNYTLLHDDLMDNADMR 87 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQL 148 RG W T++L GD +L A+ + + + L + A + EG+ + Sbjct: 88 RGHETVHRKWDANTAILSGDSMLVLAYERMAKCNPVYLSDVLHTFTETALEIGEGQQYDM 147 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE++Y+ +I+ KT+VL + A ++ +++AG + L +G +G+AFQL Sbjct: 148 EFETRNDVTEDEYIEMIRLKTSVLLACAQKIGAILAGASKQDQDNLYKFGEQIGLAFQLQ 207 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG---TKREKNFW 253 DD LD G+ GK +G D K T +I A+ R +RE W Sbjct: 208 DDYLDVYGDPKVFGKKVGGDIICNKKTYMLINAYNRADAEQRRELQHW 255 >gi|329769096|ref|ZP_08260517.1| hypothetical protein HMPREF0433_00281 [Gemella sanguinis M325] gi|328839442|gb|EGF89019.1| hypothetical protein HMPREF0433_00281 [Gemella sanguinis M325] Length = 315 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 165/300 (55%), Gaps = 30/300 (10%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--NHVL 66 LKD+ F+I K S+ E + V+K +GGKR+R +L L + + ++ + N + Sbjct: 13 LKDI----FVITK---SEDEKLNQVIKKYFSAGGKRVRVLLLLICSKLGDFNNNKKNIIR 65 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A +E IHTA+L+HDD++D + RRG + +G++ ++LVGD+L F +V+ S Sbjct: 66 MASIVEIIHTASLIHDDIIDKAETRRGNITLNKEFGDEFALLVGDYL----FSIVLREVS 121 Query: 127 QEALEAL-SLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + E + S +A TL E GEL Q NL+ DYL IK KTA+L + A S+ Sbjct: 122 EFENELIHSYLATTLKELCIGELIQEDGLYNLNTRRLDYLRKIKRKTAILIAFATVSGSI 181 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 I+G + + +G LG+++Q++DD LD+ G +GK IG+D NG TLP ++A Sbjct: 182 ISGAKKEDVDSSYRFGYYLGMSYQIIDDYLDFAGGATSLGKEIGQDLVNGNITLPALIAK 241 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFII---MRENRALVD-TEYRAYSYGQKAKDSL 298 ++ +F +S NL+K +I ++ N+ ++D T + Y KA++S+ Sbjct: 242 EKNENLFLDFNRSI---------NLEKKNVIIDYIKNNKDILDETLSISQRYLDKAENSI 292 >gi|299820943|ref|ZP_07052832.1| heptaprenyl diphosphate synthase [Listeria grayi DSM 20601] gi|299817964|gb|EFI85199.1| heptaprenyl diphosphate synthase [Listeria grayi DSM 20601] Length = 326 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 91/317 (28%), Positives = 161/317 (50%), Gaps = 9/317 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLA 68 KD+++V I K I + + + + +I SGGK LRP L TA EY D + +A Sbjct: 15 KDLKEVLVTIEKNIKIRDKNVAENINAMIHSGGKLLRPAFVLLTAQAGPEYNVDRSIAVA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H ATL+HDDV+DD+ +RRG +G + +V GD+L C I + + Sbjct: 75 SALEVLHMATLIHDDVIDDADMRRGVPTIHSKFGRKYAVYTGDYLF--CVCFKILSAHAD 132 Query: 129 ALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++E + + + + GEL Q+ +++VT +DYL I KTA LF+ + ++ + Sbjct: 133 SVENIDFNSKNIEKILMGELNQMKDLYHMNVTVKDYLTRISGKTAQLFALSCYSGAVSSK 192 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 K+ G +G+AFQ++DD+LDY + +GK + D + G +LP+I A Q Sbjct: 193 APRKTLYTAKNAGHFIGMAFQIIDDILDYTSTDDGLGKPVLNDVKQGNYSLPLIYAMQ-- 250 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 K + F +++ +L+ ++++++ + A Y +KA + LP Sbjct: 251 -KHQDEFLPLLEKREEMTDTDLQALAVLVKKHNGVEQAFELADKYTKKAIKEIHKLPSGK 309 Query: 306 WKKSLMEVVDFCLQRLN 322 ++ ++ + L R N Sbjct: 310 YRDHMLSITLSVLNRKN 326 >gi|227533688|ref|ZP_03963737.1| trans-hexaprenyltranstransferase, component II [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301067307|ref|YP_003789330.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str. Zhang] gi|227188672|gb|EEI68739.1| trans-hexaprenyltranstransferase, component II [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300439714|gb|ADK19480.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str. Zhang] Length = 325 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 127/228 (55%), Gaps = 1/228 (0%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 +I K+I ++ + + +I GGK LRP L + + + + LA AIE +HTA Sbjct: 23 MIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDVDREKMIALAAAIETLHTA 82 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV 136 TL+HDD++D S RR +V + +G T+V GD+L F ++ S +++ S Sbjct: 83 TLIHDDIIDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLSHYASSLRSIQQDSGS 142 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + +GEL Q++ +T +DYL + KT LF+ + + + +G + + + Sbjct: 143 MEKILKGELDQMATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYESGSSPTFAKNAEK 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 GMN+GIAFQL+DD+LDY + + +GK + ED R+G + P+ILA QR Sbjct: 203 IGMNIGIAFQLLDDILDYTSDDDTLGKPVCEDVRSGVYSAPLILAMQR 250 >gi|269798314|ref|YP_003312214.1| polyprenyl synthetase [Veillonella parvula DSM 2008] gi|269094943|gb|ACZ24934.1| Polyprenyl synthetase [Veillonella parvula DSM 2008] Length = 323 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 81/247 (32%), Positives = 129/247 (52%), Gaps = 1/247 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++++E + L D+E+V + + E +++ L +GGKRLR L L A Sbjct: 7 LEIMERIAL-DLERVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSI 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E +H ATL+HDDV+D + +RRG+ + GN+ ++L GD+L ++AF + Sbjct: 66 ERQRIKIAEAVEMLHLATLIHDDVLDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFKI 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + L+ S + L EGE Q+ +D E Y+ + KTA +E+ Sbjct: 126 VSEMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMIKTQKKTADFMEGCMELG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+ Q LK YG LG+AFQ+ DD++DYR GK +G D R G T P++ Sbjct: 186 GLLGDWQEDEIIELKKYGHALGMAFQITDDIMDYRETTETTGKPVGNDLREGLLTYPLLS 245 Query: 241 AFQRGTK 247 G K Sbjct: 246 IVNDGNK 252 >gi|321470028|gb|EFX81006.1| hypothetical protein DAPPUDRAFT_303672 [Daphnia pulex] Length = 393 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 86/297 (28%), Positives = 153/297 (51%), Gaps = 13/297 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVL-----LACAIEFIHTATLLHDDV 84 + +Y GK +RP++T+ A + + D +VL +A E IHTA+L+HDDV Sbjct: 101 IAQYYFNGEGKAIRPVITMCMARAINFHLDQNTPYVLQKQKKIAQIAEMIHTASLVHDDV 160 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D + RR + + +VWG + S++ GDF+L+ A M+ ++++ + LS V L +GE Sbjct: 161 IDVADSRRSRPSVNIVWGQRKSIIAGDFILAMASKMLARLQNKQVIILLSQVLADLVQGE 220 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 QL +N D Y KTA L + + + S+++G ++++ YG +G+A Sbjct: 221 FMQLGARENKDERFAHYSEKTFKKTASLIAYSCQAVSVLSGADSTLQAVAFQYGRQIGMA 280 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQLVDD+LD+ ++GK + D R G T PV+ A Q+ ++ + G Sbjct: 281 FQLVDDLLDFIATSAQLGKPVAADLRLGLATAPVLFAAQKFSELNPLILRRFQEPG---- 336 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 + + AF ++ + L T+ A+ Y A + L S ++++L+ + L R+ Sbjct: 337 -DAETAFRLVLRSDGLQRTKDLAHQYCNDAVTQIAQLTPSPYQQALVTLAHQLLHRM 392 >gi|82751067|ref|YP_416808.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus RF122] gi|82656598|emb|CAI81021.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus RF122] Length = 319 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 92/315 (29%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 9 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 68 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 69 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 128 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 129 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 188 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 189 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 246 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA D + Sbjct: 247 ----------DFKLKIEQLRRDSERKEFDECIQIIRKSDSIDEAKSVSSKYLSKALDLIS 296 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 297 ELPDGHPKSLLLSLT 311 >gi|283470681|emb|CAQ49892.1| heptaprenyl diphosphate synthase component II (hepppsynthase subunit 2) (spore germination protein c3) [Staphylococcus aureus subsp. aureus ST398] gi|302333080|gb|ADL23273.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 319 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 92/315 (29%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 9 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 68 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 69 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 128 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 129 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 188 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 189 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 246 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA D + Sbjct: 247 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALDLIS 296 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 297 ELPDGHPKSLLLSLT 311 >gi|1813470|gb|AAB41847.1| spore germination protein C3 [Bacillus firmus] Length = 288 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 127/233 (54%), Gaps = 8/233 (3%) Query: 18 LILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAI 71 +I + + + V+ DV+K +L+ +GGKR+RP+ L A Y D HVL +A + Sbjct: 23 IIEQELEASVQARHDVLKNASTHLLKAGGKRIRPVFVLLAAKFGTY--DIHVLKNIAVPL 80 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H A+L+HDDV+DD+ LRRGK + W N+ ++ G+++ ++A + Sbjct: 81 ELVHMASLVHDDVIDDAELRRGKRTVKSQWDNKVAMYTGNYIFAKAVEASAYFDHPRVHQ 140 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS + GE+ Q+ N YL IK KTA+L + + E+ +L A ++ Sbjct: 141 VLSNTLVEMCIGEVEQIRDQYNWGQNLRVYLRRIKRKTALLIAVSCELGALAADADPVIQ 200 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + L ++G N+G++FQ+ DD+LD+ G ++GK G D R G TLP + A Sbjct: 201 KHLYNFGYNVGMSFQITDDILDFVGTEKQLGKPAGGDLRQGNVTLPALYAMHH 253 >gi|11467329|ref|NP_043186.1| prenyl transferase [Cyanophora paradoxa] gi|399307|sp|P31171|PREA_CYAPA RecName: Full=Prenyl transferase gi|336639|gb|AAA65472.1| prephytoene pyrophosphate dehydrogenase [Cyanophora paradoxa] gi|1016130|gb|AAA81217.1| prenyl transferase [Cyanophora paradoxa] Length = 323 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 160/294 (54%), Gaps = 16/294 (5%) Query: 35 KYLIFSGGKRLRP--MLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L + GKR RP +L ++ A M E H LA E IHTA+L+HDD++D+S +R Sbjct: 38 EHLFSASGKRPRPAIVLLISKATMENEIITSRHRRLAEITEIIHTASLVHDDILDESDVR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG +G + ++L GDFL +Q+ + +S E ++ +S V AEGE+R+ Sbjct: 98 RGIPTVHSDFGTKIAILAGDFLFAQSSWYLANLESLEVVKLISKVITDFAEGEIRRGLNQ 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 +D+T E+YL KTA L +A+ + ++L++ V +V L +YG +LG+AFQ+VDD+ Sbjct: 158 FKVDLTLEEYLEKSFYKTASLLAASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR----EKNFWKSTINDGKISVENL 267 LD+ E+GK D + G T PV+ A ++ ++ ++ F + ++ Sbjct: 218 LDFTSSTEELGKPSCSDLKKGNLTAPVLFALEQNSELIPLIQRQFSEP---------KDF 268 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 + I+ E +A+ T A + Q A L LP SS K++L + + L+RL Sbjct: 269 EYTLQIVEETKAIEKTRELAMEHAQVAIQCLENLPPSSSKEALKLITKYVLERL 322 >gi|302338112|ref|YP_003803318.1| polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293] gi|301635297|gb|ADK80724.1| Polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293] Length = 322 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 91/310 (29%), Positives = 152/310 (49%), Gaps = 3/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ +V +IL I + I + ++ LI + GK LRP L TA ++ +A A Sbjct: 14 DLLRVREVILTHIRNSSPTIREGLEELILAQGKMLRPSFLLLTARCGKFSKKKAYDIAAA 73 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H ATL+HDDV+DD+ RRG A G + ++L+GD+L S+ F + + + E Sbjct: 74 IEMLHIATLIHDDVIDDADTRRGVPAVHTKIGIRKAILMGDYLFSRCFSIAAQYATIENG 133 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +LS + + E+ Q + + ++ YL I KTA LF + + + + + Sbjct: 134 RSLSTAVGFICQSEIDQSTKEYDFAISRRTYLRRIAGKTAALFLLSFHAGASQSKMNKTQ 193 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + G +G+AFQ++DD+LDY G +GK G D R G TLP+I+A + E Sbjct: 194 VMWARRAGYAIGMAFQIIDDILDYTGSKEVLGKPAGSDLRQGVCTLPLIIARETKQSEEI 253 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + + V+ L I+ + AL A Y +A ++L LP + ++ L Sbjct: 254 SALIQRLPNDPGVVDAL---LSIVEGSGALATAREEAQCYTDRAIEALDHLPANQAREQL 310 Query: 311 MEVVDFCLQR 320 + + L R Sbjct: 311 LALTRTVLAR 320 >gi|315638153|ref|ZP_07893335.1| octaprenyl-diphosphate synthase [Campylobacter upsaliensis JV21] gi|315481689|gb|EFU72311.1| octaprenyl-diphosphate synthase [Campylobacter upsaliensis JV21] Length = 297 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 87/225 (38%), Positives = 127/225 (56%), Gaps = 20/225 (8%) Query: 42 GKRLRPMLTLATALMLEYRGDNH--VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GK+LR L L+ A G++ +L IE IH A+LLHDD++D+S LRRG + Sbjct: 30 GKKLRSKLLLSIA------GESQKAYVLCAIIELIHLASLLHDDIIDESELRRGARSINA 83 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVACTLAEGELRQLSLSKNLDVT 157 +G + ++++GD L S+AF E QEA + LS C LA GEL ++LSK + Sbjct: 84 EFGAKNALMLGDILYSKAF---YELSKQEAKISQILSNAVCKLAIGELMDVNLSKEFNPD 140 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 +E YL +I KTAVL A+ +L+A + + A YG NLG+AFQ+VDD+LD G+ Sbjct: 141 KEAYLTMIYHKTAVLIEASARCGALLAKLDEN---AFAKYGKNLGLAFQIVDDILDITGD 197 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE----KNFWKSTIN 258 +GK DF+ GK TL I ++ + + KN +K +N Sbjct: 198 EATLGKPALSDFKEGKTTLAYIYLYESLNENDKKILKNLFKKDLN 242 >gi|254458444|ref|ZP_05071869.1| polyprenyl synthetase [Campylobacterales bacterium GD 1] gi|207084752|gb|EDZ62039.1| polyprenyl synthetase [Campylobacterales bacterium GD 1] Length = 295 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 129/219 (58%), Gaps = 8/219 (3%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 + SGGKRLR L L A E LLA +E IH A+LLHDDV+D+S RRG + Sbjct: 26 MLSGGKRLRAKLILKIAPEHE----KAPLLAAIVELIHGASLLHDDVIDESITRRGVASV 81 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 G++T+V++GD L S+AF ++E ++ ++++ L++GE++ + ++ + Sbjct: 82 NATDGSKTAVMLGDILYSKAFTELVEF-DRDIAKSIASSVTALSKGEMQDVKMADEFNED 140 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 EE YL ++ KTA L AA S+L+ G +++ + + YG NLG++FQ++DD+LD + Sbjct: 141 EEKYLDMLYLKTATLIEAAAYASALLVG-KDADKYGV--YGKNLGLSFQIIDDILDITAD 197 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 +GK DF GK TLP I +++ ++K KS+ Sbjct: 198 SATLGKPAMNDFVEGKCTLPYIYLYKKLNDQDKKRLKSS 236 >gi|237742642|ref|ZP_04573123.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13] gi|229430290|gb|EEO40502.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13] Length = 326 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 110/211 (52%), Gaps = 3/211 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GK LR L L A + DN LA +E H A+L+HDD+VDDS RRGKV+ + Sbjct: 42 GKMLRSKLLLLCAFLGSNWKDNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQ 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +G +V GDFL+++ F E + LS + GE+ Q D++E Sbjct: 102 GKYGKDAAVFAGDFLIARIFYYGAMENLNETVSILSKTVEYMCIGEIEQDLCRYQKDISE 161 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + Y I+ KTA LF AA + + G + Q LK + NLG+ FQL DD+LD+ Sbjct: 162 KKYFENIERKTAALFQAASYIGAKETGCSEEIIQKLKLFVKNLGLMFQLKDDILDFTSNS 221 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 E+GK +DF+NG T PVI+A + RE Sbjct: 222 KELGKETHKDFQNGIYTFPVIMALKNPKARE 252 >gi|323439529|gb|EGA97250.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus O11] gi|323442232|gb|EGA99863.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus O46] Length = 314 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 92/315 (29%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 4 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 63 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 64 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 123 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 124 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 183 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 184 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 241 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA D + Sbjct: 242 ----------DFKLKIEQLRRDSERKELEECIQIIRKSDSIDEAKAVSSKYLSKALDLIS 291 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 292 ELPDGHPKSLLLSLT 306 >gi|167044388|gb|ABZ09065.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote HF4000_APKG6D3] Length = 283 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 70/184 (38%), Positives = 111/184 (60%), Gaps = 1/184 (0%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +KY + GGKR+RP++ L + + DN + ACAIEF+HT +++HDD++D+ LRR Sbjct: 42 LKYAL-GGGKRIRPIILLLASECVGEIDDNTLAAACAIEFLHTESVIHDDIIDNETLRRQ 100 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K + +G TSVL GDF+L + + + L+ A ++EGE+ + L + Sbjct: 101 KDPFHIKYGYNTSVLTGDFVLGLILNIASRINNPRVTKNLATTAMMMSEGEVIESRLEAS 160 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 DVT +DYL VI+ KTA F A + ++I+G ++L YG N+GIA+Q+ DD+LD Sbjct: 161 EDVTFDDYLKVIEYKTATAFETASRLGAIISGGTEEEIESLADYGKNIGIAYQIRDDLLD 220 Query: 214 YRGE 217 ++ E Sbjct: 221 WQNE 224 >gi|319953302|ref|YP_004164569.1| geranyltranstransferase [Cellulophaga algicola DSM 14237] gi|319421962|gb|ADV49071.1| Geranyltranstransferase [Cellulophaga algicola DSM 14237] Length = 324 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 93/283 (32%), Positives = 140/283 (49%), Gaps = 12/283 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y++ GGKRLRP+LTL TA + + A A+E H +L+HDD++DD+ LRRG Sbjct: 31 ITYILSLGGKRLRPILTLMTADIFGADYKKALDAALAVEVFHNFSLVHDDIMDDAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----SLVACTLAEGELRQLS 149 K W T +L GD +L A+ + E E +L S A + EG+ + Sbjct: 91 KATVHEKWDINTGILSGDAMLITAYQL-FENYEGEVFRSLAKLFSKTAIEVCEGQQYDVD 149 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 DVT +YL +I+ KTAVL AA+++ ++IA + ++ +G NLGIAFQL D Sbjct: 150 FETRDDVTIPEYLKMIEYKTAVLVGAAMKMGAIIANASTEGQDSIYEFGRNLGIAFQLQD 209 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE----KNFWKSTINDGKISVE 265 D LD G+ GK +G D K T + A + + ++ + D ++ Sbjct: 210 DYLDAFGDPKTFGKQVGGDIIENKKTFLYLKALAQSAPEQVSELEHLFSIQPVDATEKID 269 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 +K F+ E+ A T+ Y +KA D L L S KK Sbjct: 270 TVKSIFL---ESGAAERTQKEIVIYTEKAFDVLAKLEISEEKK 309 >gi|223043259|ref|ZP_03613306.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit 2) (spore germination protein c3) [Staphylococcus capitis SK14] gi|314933652|ref|ZP_07841017.1| heptaprenyl diphosphate synthase, component II [Staphylococcus caprae C87] gi|222443470|gb|EEE49568.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit 2) (spore germination protein c3) [Staphylococcus capitis SK14] gi|313653802|gb|EFS17559.1| heptaprenyl diphosphate synthase, component II [Staphylococcus caprae C87] Length = 319 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 81/250 (32%), Positives = 131/250 (52%), Gaps = 6/250 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLA 68 +++KV + + I S + + + +L+ SGGKR+RP+ + ++ G ++ +A Sbjct: 9 EIKKVEERLERAIQSTDQTLEEASFHLLSSGGKRVRPVFVILSSQFGTSEGTSEDTYRVA 68 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRG+ W T++L G+FLL+ + E K Sbjct: 69 VALELIHMATLVHDDVIDKSDKRRGRPTISKKWDQTTAILTGNFLLALGLQHLSEIKDAR 128 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +S + GEL Q N + +YL I KTA+L A EV ++ +G Sbjct: 129 VHSIISNSIVDVCRGELFQFQDQFNSEQNITNYLRRINRKTALLIQLATEVGAITSGASK 188 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV+L ++ Sbjct: 189 ETIRKLKLIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPVLLEM----RK 244 Query: 249 EKNFWKSTIN 258 K+F + N Sbjct: 245 NKDFKQKITN 254 >gi|116495752|ref|YP_807486.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC 334] gi|239630159|ref|ZP_04673190.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116105902|gb|ABJ71044.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC 334] gi|239527771|gb|EEQ66772.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 320 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 127/228 (55%), Gaps = 1/228 (0%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 +I K+I ++ + + +I GGK LRP L + + + + LA AIE +HTA Sbjct: 18 MIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDVDREKMIALAAAIETLHTA 77 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV 136 TL+HDD++D S RR +V + +G T+V GD+L F ++ S +++ S Sbjct: 78 TLIHDDIIDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLSHYASSLRSIQQDSGS 137 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + +GEL Q++ +T +DYL + KT LF+ + + + +G + + + Sbjct: 138 MEKILKGELDQMATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYESGSSPTFAKNAEK 197 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 GMN+GIAFQL+DD+LDY + + +GK + ED R+G + P+ILA QR Sbjct: 198 IGMNIGIAFQLLDDILDYTSDDDTLGKPVCEDVRSGVYSAPLILAMQR 245 >gi|253732112|ref|ZP_04866277.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724159|gb|EES92888.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 332 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 92/315 (29%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 22 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 81 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 82 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 141 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 142 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 201 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 202 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 259 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA D + Sbjct: 260 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALDLIS 309 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 310 ELPDGHPKSLLLSLT 324 >gi|298694759|gb|ADI97981.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus ED133] Length = 314 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 92/315 (29%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 4 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 63 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 64 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 123 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 124 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 183 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 184 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 241 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA D + Sbjct: 242 ----------DFKLKIEQLRRDSDRKEFEDCIQIIRKSDSIDEAKAVSSKYLSKALDLIS 291 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 292 ELPDGHPKSLLLSLT 306 >gi|34762284|ref|ZP_00143289.1| Farnesyl pyrophosphate synthetase; Geranyltranstransferase; Farnesyltransferase; Heptaprenyl diphosphate synthase component II [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|256846036|ref|ZP_05551494.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 3_1_36A2] gi|27888070|gb|EAA25132.1| Farnesyl pyrophosphate synthetase; Geranyltranstransferase; Farnesyltransferase; Heptaprenyl diphosphate synthase component II [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|256719595|gb|EEU33150.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 3_1_36A2] Length = 326 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 110/211 (52%), Gaps = 3/211 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GK LR L L A + DN LA +E H A+L+HDD+VDDS RRGKV+ + Sbjct: 42 GKMLRSKLLLLCAFLGSNWKDNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQ 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +G +V GDFL+++ F E + LS + GE+ Q D++E Sbjct: 102 GKYGKDAAVFAGDFLIARIFYYGAMENLNETVSILSKTVEYMCIGEIEQDLCRYQEDISE 161 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + Y I+ KTA LF AA + + G + Q LK + NLG+ FQL DD+LD+ Sbjct: 162 KKYFENIERKTAALFQAASYIGAKETGCSEEIIQKLKLFVKNLGLMFQLKDDILDFTSNS 221 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 E+GK +DF+NG T PVI+A + RE Sbjct: 222 KELGKETHKDFQNGIYTFPVIMALKNPKARE 252 >gi|269955291|ref|YP_003325080.1| polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269303972|gb|ACZ29522.1| Polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 343 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 80/221 (36%), Positives = 116/221 (52%), Gaps = 7/221 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 DV +L+ +GGKRLRP LTL + + V A +E H A+L HDDV+D + LR Sbjct: 50 DVAHHLVAAGGKRLRPFLTLLAGELGDGARTELVDAAVVVELTHLASLYHDDVMDSAPLR 109 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQL 148 RG + VWGN ++LVGD L ++A V EA+ L A T L G+L + Sbjct: 110 RGAPSVHSVWGNSVAILVGDLLFARASARVAGLGP----EAVRLQAETFERLCLGQLHET 165 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + + + YL V+ KTA L + + + ++ G + + +YG +G+AFQ+ Sbjct: 166 TGPAEGEDPAQHYLQVLADKTASLLATSARLGAMFGGAPAEQVEVVAAYGEKVGVAFQIA 225 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 DDVLD +E GK G D R PT+PV+L QR + E Sbjct: 226 DDVLDLASTGSESGKTPGTDLRERVPTMPVLLLRQRLARGE 266 >gi|118616467|ref|YP_904799.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans Agy99] gi|183980932|ref|YP_001849223.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M] gi|118568577|gb|ABL03328.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans Agy99] gi|183174258|gb|ACC39368.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M] Length = 335 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 17/301 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVD 86 E++ D + +L +GGKR RP+ T+ +A + G + V++A A IE IH ATL HDDV+D Sbjct: 42 EVMTDSLLHLFLAGGKRFRPLFTVLSAQVGPNPGADEVVIAGAVIEMIHLATLYHDDVMD 101 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---G 143 ++ +RRG +A WGN ++L GD+LL+ A +V S+ +A+ +VA T A+ G Sbjct: 102 EAQVRRGAPSANARWGNNVAILAGDYLLATASRLV----SRLGPDAVRIVADTFAQLVTG 157 Query: 144 ELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 ++R+ + +D+ E+ YL V+ KT L AA + +G + L G +G Sbjct: 158 QMRETRGAPEGVDMIEQ-YLKVVHEKTGCLIGAAGRFGGMFSGADGEQVERLNRLGGIVG 216 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF-QRGT--KREKNFWKSTIND 259 AFQ+ DD++D + + GK G D R G TLP++ A Q G+ R + I D Sbjct: 217 TAFQIADDIIDIDSDTEQSGKLPGTDLREGVRTLPMLYALRQTGSDGARLRTLLAGPIRD 276 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 E A ++R + + + Y +A+ L LPD +++L +VD+ + Sbjct: 277 DAEVFE----ALALLRASPGMDQAKEVLGQYAARARHELDLLPDVPGRQALAALVDYTVN 332 Query: 320 R 320 R Sbjct: 333 R 333 >gi|86153438|ref|ZP_01071642.1| bifunctional short chain isoprenyl diphosphate synthase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843164|gb|EAQ60375.1| bifunctional short chain isoprenyl diphosphate synthase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 297 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 144/262 (54%), Gaps = 17/262 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GK+LR L LA A + + AIE IH A+LLHDD++D+S LRRG + Sbjct: 29 SGKKLRSKLLLAIA----DESEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAE 84 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G + ++++GD L S+AF + + ++ A +S LA GEL + L + ++ +E Sbjct: 85 FGTKNALMLGDILYSKAFYKLSKMDARFA-SIISDAVVKLAIGELMDVDLGEKFNINKEA 143 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 YL +I +KTAVL A+ +++AG+ + YG NLG+AFQ++DD+LD + + Sbjct: 144 YLKMIYNKTAVLIEASARCGAILAGL---YEKDFAEYGKNLGLAFQMIDDILDIKSDEKI 200 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVENLKKAFIIMRE 276 +GK DF+ GK TLP I ++ ++++ +K +N+ + E LK F E Sbjct: 201 LGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKKDLNENE--KEWLKTKF---EE 255 Query: 277 NRALVDTEYRAYSYGQKAKDSL 298 +AL A +Y +KA+ ++ Sbjct: 256 QKALEKAILEAKTYAKKARKAI 277 >gi|41410156|ref|NP_962992.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398989|gb|AAS06608.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 335 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 98/321 (30%), Positives = 165/321 (51%), Gaps = 16/321 (4%) Query: 8 TLKD-MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 T++D + ++ L+ + S +++ + + +L +GGKR RP+ T+ +A + V Sbjct: 21 TVRDGVGRIEQLMDTELRSADDIMTESLTHLFKAGGKRFRPLFTVLSAQIGPDPDAAEVT 80 Query: 67 LACA-IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A IE +H ATL HDDV+D++ +RRG A + WGN ++L GD+L + A +V Sbjct: 81 IAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGDYLFATASRLV---- 136 Query: 126 SQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 S+ EA+ L+A T A+ G++R+ K E YL V+ KTA L +AA ++ Sbjct: 137 SRLGPEAVRLIAETFAQLVTGQMRETRGRKQGSDPIEHYLKVVYEKTACLIAAAGRFGAM 196 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G + L G +G AFQ+ DD++D + +E GK G D R G TLP++ A Sbjct: 197 FSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPGTDVREGVHTLPMVYAL 256 Query: 243 QRG---TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + R + I+D ++ E A ++R + + + Y +A L Sbjct: 257 REPGPDAARLRELLVGPIDDDEVVAE----ALTLLRASPGMAKAKQSLREYAAQAHRELD 312 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LPD +++L +VDF + R Sbjct: 313 QLPDVPGRRALQTLVDFTISR 333 >gi|307352924|ref|YP_003893975.1| polyprenyl synthetase [Methanoplanus petrolearius DSM 11571] gi|307156157|gb|ADN35537.1| Polyprenyl synthetase [Methanoplanus petrolearius DSM 11571] Length = 321 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 97/295 (32%), Positives = 157/295 (53%), Gaps = 20/295 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLLHDDVVDDSALRRGK 94 +L+ +GGKRLRP +T+ A ++E + V+ A A+E HT TL+HDD++D RRG Sbjct: 35 HLLCAGGKRLRPSVTMLAANIVEKGSSDSVIPAALALEVTHTFTLVHDDIMDGDVARRGV 94 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAE---GELRQLS 149 W T++L GD L ++AF ++ + +EA++++A T E G+ +S Sbjct: 95 PTVHTKWDEPTAILAGDVLYAEAFELITMADADPVAKVEAVAILARTCLEICRGQHEDMS 154 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 K DV +YL ++ KT L++AA + ++AG AL +G G+AFQ+ D Sbjct: 155 FEKRDDVDPYEYLEMVGQKTGKLYAAAAAIGGILAGGDARQVGALHDWGYLSGVAFQIQD 214 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI--SVENL 267 DV+D + + GK+ D R GK TL I A +G K + K ++D +I ++ L Sbjct: 215 DVIDLMADSEKSGKDRASDLREGKQTLVAIFAKDKGLDLSK-YRKENLSDEEIDQAITEL 273 Query: 268 KKAFII--MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 K+A II +RE A + ++AK++L PD K+ L E+ D+ + R Sbjct: 274 KEAGIIDAVRET---------AMDHVKRAKETLVVFPDCEEKRLLGEITDYFINR 319 >gi|24215915|ref|NP_713396.1| geranylgeranyl pyrophosphate synthase [Leptospira interrogans serovar Lai str. 56601] gi|24197125|gb|AAN50414.1| geranylgeranyl pyrophosphate synthase [Leptospira interrogans serovar Lai str. 56601] Length = 319 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 126/233 (54%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I D++++ ++ Y I SGGKR+RP+L +L Y G + + + E IH A+LLHD Sbjct: 22 IREDLKILSEIKTYTIQSGGKRIRPILHYCLCQLLGYSGKHWLDVGAIAELIHAASLLHD 81 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DVVD++ RRG + +GN+T++L GD+LL+ + E +E + V L+ Sbjct: 82 DVVDEAETRRGLQSVGSKFGNKTAILAGDYLLACGIDHLNGLGYPELMEVFTQVIKDLSV 141 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 EL Q+ KN +T + Y +I KTA LF+ + +++ ++ L+ +G++LG Sbjct: 142 SELIQMEWEKNPKITLDIYNKIIYGKTASLFAVVCVSAGILSDKNEKEKKKLRQFGIDLG 201 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 FQ DD +DY ++ GK +DF NG T P++L R + +K S Sbjct: 202 SFFQKKDDAIDYFTSASKSGKIPLKDFYNGLYTYPILLLLDRADRNDKKLIHS 254 >gi|212544820|ref|XP_002152564.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Penicillium marneffei ATCC 18224] gi|210065533|gb|EEA19627.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Penicillium marneffei ATCC 18224] Length = 459 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 93/267 (34%), Positives = 134/267 (50%), Gaps = 24/267 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RR +A +GN+ +VL GDFLL +A + ++ Sbjct: 202 LAEITELIHTASLLHDDVIDNAVTRRSSNSANTQFGNKMAVLAGDFLLGRASVALARLRN 261 Query: 127 QEALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEV 179 E +E L+ V L EGE QL + + D T YL KTA L S + Sbjct: 262 PEVIELLATVIANLVEGEFMQLKNTASDERSPVFTDDTIAYYLQKTYLKTASLISKSCRA 321 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ + +A SYG NLG+AFQLVDD+LDY E GK G D G T P++ Sbjct: 322 TALLGNSTPEIVEAAYSYGRNLGLAFQLVDDMLDYTVNSVEFGKPAGADLELGLATAPLL 381 Query: 240 LAFQRGTKREKNFWKSTINDG-----KISVE-NLKKAFIIMRENRALVDTEYRAYSYGQK 293 A WKS G K E ++++A ++ + + T A Y K Sbjct: 382 FA-----------WKSNPELGALVGRKFEQEGDVERARELVARSDGIEQTRALAQEYADK 430 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A +L LPDS K L+++ + ++R Sbjct: 431 AAAALDILPDSDAKNGLLDMCEKTMKR 457 >gi|300779871|ref|ZP_07089727.1| possible trans-hexaprenyltranstransferase [Corynebacterium genitalium ATCC 33030] gi|300533981|gb|EFK55040.1| possible trans-hexaprenyltranstransferase [Corynebacterium genitalium ATCC 33030] Length = 386 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 93/316 (29%), Positives = 162/316 (51%), Gaps = 12/316 (3%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 ++ V L+ +R+ S + + + V +L +GGKR RPM+ LA+ + + +N V A Sbjct: 78 LDGVEKLMFERLSSGHDFLNEKVTHLAKAGGKRFRPMMAMLASEFGDQPQAENVVKGATI 137 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H ATL HDDV+D++A RRG +A W N ++L GDFLL++A ++ E + + Sbjct: 138 VEMVHLATLYHDDVMDEAAKRRGVDSANARWTNTVAILSGDFLLAEASRIMSEIDTA-TV 196 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L G++R+ D E YL+VI+ KT VL ++A + + +G ++ Sbjct: 197 AHFADTFSDLVTGQMRETVGPGEGDPVEH-YLNVIREKTGVLIASAAFLGATHSGAKDED 255 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + LK G +G+ FQ+VDDV+D + + GK G D R G TLPV+ A R + Sbjct: 256 VRTLKELGEAVGMIFQIVDDVIDIFSDSTQSGKTPGTDLREGVFTLPVLYAM-RDSSPAG 314 Query: 251 NFWKSTINDGKISVENLKKAFIIMRE----NRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ + I ++ +A ++ + RAL D Y L LPD Sbjct: 315 EELRAMLTGPLIDDADVARALDLIAQTDGRQRALDDVR----GYLADVDKHLDALPDIPA 370 Query: 307 KKSLMEVVDFCLQRLN 322 +++ ++ + ++R+ Sbjct: 371 NRAIRQISRYTVERVG 386 >gi|16801110|ref|NP_471378.1| hypothetical protein lin2044 [Listeria innocua Clip11262] gi|16414545|emb|CAC97274.1| lin2044 [Listeria innocua Clip11262] Length = 321 Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 103/298 (34%), Positives = 152/298 (51%), Gaps = 26/298 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVV 85 E D +L+ +GGKR+RPM +A L D + AIE IH A+++HDDVV Sbjct: 31 ETTSDAALHLLEAGGKRIRPMFVCLSA-RLSPDADFEAVKNAGVAIELIHMASIVHDDVV 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 DD+ LRRG+ + WGN ++ GDFL +++ + E K A + LS V L+ GE+ Sbjct: 90 DDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEI 149 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 QL N D + +YL IK KTA+L +A+ + +++G + + L +G +G+AF Sbjct: 150 EQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYKKLYRFGYYVGMAF 209 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN------- 258 Q+ DDVLD+ G E+GK GED G TLPV A E F K I+ Sbjct: 210 QITDDVLDFVGTEKELGKPAGEDLSQGNVTLPVFFAM------EDPFLKKRISQVTEDTQ 263 Query: 259 --DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 + + VE +KK+ E+ A +Y +KA +L LP K L ++V Sbjct: 264 AEEIAVLVEEIKKSGAKKAEDVAT--------AYLKKAVATLDSLPQVPELKPLKQIV 313 >gi|238018911|ref|ZP_04599337.1| hypothetical protein VEIDISOL_00771 [Veillonella dispar ATCC 17748] gi|237864395|gb|EEP65685.1| hypothetical protein VEIDISOL_00771 [Veillonella dispar ATCC 17748] Length = 323 Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 79/239 (33%), Positives = 127/239 (53%), Gaps = 1/239 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++++E + L D+E V + + E +++ L +GGKRLR L L A Sbjct: 7 LEIMERIAL-DLEGVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSV 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E +H ATL+HDDV+D + +RRG+ + GN+ ++L GD+L ++AF + Sbjct: 66 ERQRIRIAEAVEMLHLATLIHDDVLDQAEIRRGEETIHMHKGNKVAILSGDYLFAKAFQI 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + L+ S + L EGE Q+ +D + Y+ + KTA +E+ Sbjct: 126 VSEMPNMKYLQIFSHIITCLVEGEFMQMEDVYRIDQGIDRYMTKTQKKTADFMEGCMELG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 L+ G S LK YG LG+AFQ+ DD++DYR GK +G D R G T P++ Sbjct: 186 GLLGGWSESEIVELKKYGHALGMAFQITDDIMDYRETTETTGKPVGNDLREGLLTYPLL 244 >gi|327402903|ref|YP_004343741.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823] gi|327318411|gb|AEA42903.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823] Length = 322 Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 95/325 (29%), Positives = 164/325 (50%), Gaps = 18/325 (5%) Query: 9 LKDMEKVNFLILKRICS-DVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 +K +E+ I ++I ++E P D ++Y + GGKR+RP+LTL + + + + Sbjct: 1 MKSLEQYTRFIEEKIAGINLEEEPRKLYDPLRYFLSLGGKRMRPILTLISGELFQISNEE 60 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A IE H +L+HDD++D++ +RRGK + W + ++L GD L + + + + Sbjct: 61 SLSAALTIELFHNFSLIHDDIMDEAPVRRGKPTVHIKWNSSVAILSGDVLFVEGYQQLAK 120 Query: 124 TKSQEA---LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + L+ + A + +G+ + DVTEE Y+ +I+ KT+VL ALE Sbjct: 121 YTDKRLPILLKRFNETAIEVCQGQQLDMDFESRDDVTEEAYIEMIRLKTSVLLGCALEFG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI- 239 +++ R L +G++LGIAFQ+ DD+LD G+ GK +G D + K TL + Sbjct: 181 AILGNQSEETRNHLYHFGVSLGIAFQIQDDILDLYGDPELFGKQVGGDILSNKKTLLFLK 240 Query: 240 -LAFQRGTK--REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A +K R + + D KI+ + KK F + A ++T YS +A + Sbjct: 241 AKAISEASKDARFGDLLQMAPTDSKIA--SAKKLFEEIDAKNASLETMNGYYS---EAIN 295 Query: 297 SLRCLPDSSWK-KSLMEVVDFCLQR 320 SL L + SL E+ +F + R Sbjct: 296 SLDQLESKGLELGSLRELANFLITR 320 >gi|86149236|ref|ZP_01067468.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|121612193|ref|YP_001000241.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005197|ref|ZP_02270955.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|218562193|ref|YP_002343972.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840594|gb|EAQ57851.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|87250330|gb|EAQ73288.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|112359899|emb|CAL34687.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315927039|gb|EFV06394.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929574|gb|EFV08762.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 305] Length = 297 Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 144/262 (54%), Gaps = 17/262 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GK+LR L LA A + + AIE IH A+LLHDD++D+S LRRG + Sbjct: 29 SGKKLRSKLLLAIA----DESEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAE 84 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G + ++++GD L S+AF + + ++ A +S LA GEL + L + ++ +E Sbjct: 85 FGTKNALMLGDILYSKAFYELSKMDARFA-SIISDAVVKLAIGELMDVDLGEKFNINKEA 143 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 YL +I +KTAVL A+ +++AG+ + YG NLG+AFQ++DD+LD + + Sbjct: 144 YLKMIYNKTAVLIEASARCGAILAGL---YEKDFAEYGKNLGLAFQMIDDILDIKSDEKI 200 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVENLKKAFIIMRE 276 +GK DF+ GK TLP I ++ ++++ +K +N+ + E LK F E Sbjct: 201 LGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKKDLNENE--KEWLKTKF---EE 255 Query: 277 NRALVDTEYRAYSYGQKAKDSL 298 +AL A +Y +KA+ ++ Sbjct: 256 QKALEKAILEAKTYAKKARKAI 277 >gi|259486315|tpe|CBF84055.1| TPA: hexaprenyl pyrophosphate synthetase Coq1, putative (AFU_orthologue; AFUA_3G06120) [Aspergillus nidulans FGSC A4] Length = 456 Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 95/277 (34%), Positives = 141/277 (50%), Gaps = 20/277 (7%) Query: 58 EYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112 ++ GD ++L LA E IHTA+LLHDDV+D++ RR +A + +GN+ +VL GDF Sbjct: 185 DFAGDENILPSQRRLAEITELIHTASLLHDDVIDNALTRRSSNSANIEFGNKMAVLAGDF 244 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVI 165 LL +A + + E E L+ V L EGE QL + KN T++ YL Sbjct: 245 LLGRASVALARLRDPEVTELLATVIANLVEGEFMQLKNTAEDEKNPVFTDDTISYYLQKT 304 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA L S + ++L+ V +A SYG NLG+AFQLVDD+LDY E+GK Sbjct: 305 YLKTASLISKSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYTVSGVELGKPA 364 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 G D G T P++ A+++ + + +G + K ++ R N + T Sbjct: 365 GADLELGLATAPLLFAWKQHPELGPLVGRKFCREGDVE----KARELVYRAN-GVEQTRA 419 Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 A Y KA ++ PDS K L+E+ C + +N Sbjct: 420 LAQEYADKAIAAISPFPDSEAKAGLIEM---CRKTMN 453 >gi|27468075|ref|NP_764712.1| heptaprenyl diphosphate syntase component II [Staphylococcus epidermidis ATCC 12228] gi|27315620|gb|AAO04754.1|AE016747_251 heptaprenyl diphosphate syntase component II [Staphylococcus epidermidis ATCC 12228] Length = 339 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 90/307 (29%), Positives = 158/307 (51%), Gaps = 19/307 (6%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----V 65 +++KV + + I S + + + +L+ SGGKR+RP + + ++ +N Sbjct: 29 EIKKVEKRLEEAIISSDQTLQEASFHLLSSGGKRVRPAFVILSG---QFGSNNKPSEDTY 85 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+ + E Sbjct: 86 RVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEIS 145 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +S + GEL Q N + T +YL I KTA+L + +V ++ + Sbjct: 146 DTRVHSTISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSN 205 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 N V + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV+L Sbjct: 206 ASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPVLLEM--- 262 Query: 246 TKREKNFWKSTINDGKISVENLKKAF----IIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 R+ +K I+ +++ ++ + AF I+R++ ++ ++ + Y KA + + L Sbjct: 263 --RKNKTFKDKIS--QLNPDSPQHAFETCITIIRQSESIEQSKQISEKYLNKAINLIDEL 318 Query: 302 PDSSWKK 308 D K+ Sbjct: 319 EDGPNKE 325 >gi|46138837|ref|XP_391109.1| hypothetical protein FG10933.1 [Gibberella zeae PH-1] Length = 444 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/261 (34%), Positives = 137/261 (52%), Gaps = 12/261 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + ++ Sbjct: 187 LAEIAELIHTASLLHDDVIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRN 246 Query: 127 QEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E L+ V L EGE QL + +N +EE YL KTA L S + Sbjct: 247 PEVVELLATVIANLVEGEFMQLKNTERDERNPKWSEETVTYYLQKTYLKTASLISKSCRA 306 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ A SYG NLG+AFQLVDD+LDY +++GK G D G T P++ Sbjct: 307 AALLGNTDAVTVDAAYSYGRNLGLAFQLVDDLLDYTQSGSDLGKPAGADLELGLATAPLL 366 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A+++ + + +G ++++A ++ ++ + T A Y KA S+ Sbjct: 367 FAWKQMPELGALVGRKFAQEG-----DVQRARELVLQSDGIEQTRALAQDYVDKAIASIA 421 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 P+S K L+E+ L+R Sbjct: 422 DFPESEAKDGLIEMAHKSLKR 442 >gi|327314324|ref|YP_004329761.1| polyprenyl synthetase [Prevotella denticola F0289] gi|326945935|gb|AEA21820.1| polyprenyl synthetase [Prevotella denticola F0289] Length = 324 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 7/222 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 ++Y++ GGKR+RP L L + + +R D +L ACA+E H TLLHDD++DD+ LR Sbjct: 31 IRYVLSLGGKRIRPTLMLLSYNL--FRDDPETILSPACALETYHNYTLLHDDLMDDAPLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQL 148 RG+ + W T++L GD +L AF + + + + L L T + EG+ + Sbjct: 89 RGQQTVHVRWDANTAILSGDSMLVLAFERMQQCDDRHLRDVLRLFTVTALEIGEGQQYDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE +Y+ +I+ KT+VL + A+++ +L+A + L +G +G+AFQL Sbjct: 149 EFENRNDVTEAEYIEMIRLKTSVLLACAVKLGALLADAPAGDVENLYKFGERIGLAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 DD LD G+ GK IG D + K T +I A + R++ Sbjct: 209 DDYLDVYGDPKVFGKKIGGDITSNKKTYMLINALNKANARQR 250 >gi|227544097|ref|ZP_03974146.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri CF48-3A] gi|300909796|ref|ZP_07127257.1| polyprenyl synthetase [Lactobacillus reuteri SD2112] gi|227185930|gb|EEI66001.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri CF48-3A] gi|300893661|gb|EFK87020.1| polyprenyl synthetase [Lactobacillus reuteri SD2112] Length = 326 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/315 (30%), Positives = 155/315 (49%), Gaps = 12/315 (3%) Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLACA 70 KVN I RI + D ++ + +GGK LRP L A + D + +A + Sbjct: 18 KVNQTINDRITIKNTQLHDALQQMASNGGKYLRPAFFLLFANINHQTADEQERLIKIASS 77 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H ATL+HDD++DDS RRG V+ + +G T+V GDFL + F +++ET + Sbjct: 78 LEVLHMATLIHDDIIDDSPKRRGAVSVQSAFGKDTAVYTGDFLFTIFFDLLVETMTGSPY 137 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L+ A T+ + GEL Q+ +LD + DY + KTA +FS A E + Sbjct: 138 --LTRNARTMRKILTGELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLAAEEGAYFGHSD 195 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 K G N+GI+FQ++DD+LDY G+ + K + ED G +LP++L Q Sbjct: 196 RRTINLAKRIGQNIGISFQILDDILDYSGD-ERLNKPVLEDLATGVYSLPLLLTLQ---N 251 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++++E+++K I+ + + + A + QKA+ + L D + Sbjct: 252 HRHELEPLLAKKRQMTIEDMEKVQKIVVTHGGVKKAQEIATKFTQKAQTEIDQLADKHTR 311 Query: 308 KSLMEVVDFCLQRLN 322 K L V L R+N Sbjct: 312 KMLKLVAKKLLTRVN 326 >gi|57866983|ref|YP_188615.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A] gi|282876098|ref|ZP_06284965.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis SK135] gi|57637641|gb|AAW54429.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A] gi|281295123|gb|EFA87650.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis SK135] gi|329725457|gb|EGG61940.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis VCU144] gi|329735239|gb|EGG71531.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis VCU045] gi|329737300|gb|EGG73554.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis VCU028] Length = 319 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 90/307 (29%), Positives = 158/307 (51%), Gaps = 19/307 (6%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----V 65 +++KV + + I S + + + +L+ SGGKR+RP + + ++ +N Sbjct: 9 EIKKVEKRLEEAIISSDQTLQEASFHLLSSGGKRVRPAFVILSG---QFGSNNKPSEDTY 65 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+ + E Sbjct: 66 RVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEIS 125 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +S + GEL Q N + T +YL I KTA+L + +V ++ + Sbjct: 126 DTRVHSTISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSN 185 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 N V + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV+L Sbjct: 186 ASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPVLLEM--- 242 Query: 246 TKREKNFWKSTINDGKISVENLKKAF----IIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 R+ +K I+ +++ ++ + AF I+R++ ++ ++ + Y KA + + L Sbjct: 243 --RKNKTFKDKIS--QLNPDSPQHAFETCITIIRQSESIEQSKQISEKYLNKAINLIDEL 298 Query: 302 PDSSWKK 308 D K+ Sbjct: 299 EDGPNKE 305 >gi|258422499|ref|ZP_05685407.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9635] gi|257847256|gb|EEV71262.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9635] Length = 319 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 92/318 (28%), Positives = 156/318 (49%), Gaps = 29/318 (9%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV----- 65 +++KV + K I S ++ +L+ SGGKR+RP + ++ ++ D+ Sbjct: 9 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSS---QFGKDDQTSEQTY 65 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 66 QVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVK 125 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 126 DNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQ 185 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 186 SDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKN 245 Query: 246 TKREKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKD 296 D K+ +E L++ I+R++ ++ + + + Y KA D Sbjct: 246 P------------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALD 293 Query: 297 SLRCLPDSSWKKSLMEVV 314 + LPD K L+ + Sbjct: 294 LISELPDGHPKSLLLSLT 311 >gi|269128599|ref|YP_003301969.1| trans-hexaprenyltranstransferase [Thermomonospora curvata DSM 43183] gi|268313557|gb|ACY99931.1| Trans-hexaprenyltranstransferase [Thermomonospora curvata DSM 43183] Length = 331 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 89/309 (28%), Positives = 152/309 (49%), Gaps = 8/309 (2%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 V L+++ + SD ++ + K+L+ +GGKR RP L L + + V A +E Sbjct: 26 VEELLVQSVTSDDPLLAEASKHLVEAGGKRFRPALVLLASHFGDPAAAGVVPAAVVVELT 85 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 H ATL HDDV+D++ +RRG+ +A + W N ++L GD+L ++A ++ + Q A+ + Sbjct: 86 HLATLYHDDVMDEATVRRGEESANVRWTNTVAILTGDYLFARASDLLADLGPQ-AVRIQA 144 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L G++ + S E YL V+ KTA L + + + +L+AG V + + Sbjct: 145 RAFARLVRGQIAETSGPAPDADPLEHYLQVVADKTASLIAVSGHLGALLAGAPQQVVETI 204 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP---VILAFQRGTKREKN 251 S +G+AFQL DD+LD E + GK G D R G TLP V+ + R + Sbjct: 205 TSACEKIGVAFQLSDDILDIASEFEQSGKTPGTDLREGIRTLPMLHVLSSTDPADARLRE 264 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + D ++ E A ++R + A+ + + A+ L LPD + +L Sbjct: 265 LLCQDLTDEELHAE----ALALLRAHPAMDRAREDLRRWAEDARAELLTLPDIPARAALT 320 Query: 312 EVVDFCLQR 320 + D+ + R Sbjct: 321 GLCDYVVSR 329 >gi|282850553|ref|ZP_06259932.1| polyprenyl synthetase [Veillonella parvula ATCC 17745] gi|282580046|gb|EFB85450.1| polyprenyl synthetase [Veillonella parvula ATCC 17745] Length = 323 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/252 (32%), Positives = 128/252 (50%), Gaps = 16/252 (6%) Query: 12 MEKVNFL-ILKRICSDVEMIPD---------------VVKYLIFSGGKRLRPMLTLATAL 55 M + N L I++RI D+E + + +++ L +GGKRLR L L A Sbjct: 1 MSQTNELEIMERIALDLEHVEESLASSFNTVAEDFNALIRPLSAAGGKRLRAQLCLLIAN 60 Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 + +A A+E +H ATL+HDDV+D + +RRG+ + GN+ ++L GD+L + Sbjct: 61 AGTSIERQRIKIAEAVEMLHLATLIHDDVLDQAEIRRGEDTIHMHKGNKVAILSGDYLFA 120 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 +AF +V E + + L+ S + L EGE Q+ +D E Y+ + KTA Sbjct: 121 KAFKIVSEMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKTADFMEG 180 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +E+ L+ Q LK YG LG+AFQ+ DD++DYR GK +G D R G T Sbjct: 181 CMELGGLLGDWQEDEIIELKKYGHALGMAFQITDDIMDYRETAETTGKPVGNDLREGLLT 240 Query: 236 LPVILAFQRGTK 247 P++ G K Sbjct: 241 YPLLSIVNDGNK 252 >gi|184200190|ref|YP_001854397.1| putative polyprenyl diphosphate synthase [Kocuria rhizophila DC2201] gi|183580420|dbj|BAG28891.1| putative polyprenyl diphosphate synthase [Kocuria rhizophila DC2201] Length = 339 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/326 (30%), Positives = 157/326 (48%), Gaps = 13/326 (3%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L L L +E+V + + + S ++ +L+ +GGKR+RP+L L A + ++ Sbjct: 16 LGPLMLGSLERVEQRLGESVRSSDQLADVTAHHLLAAGGKRVRPLLALLAAEVAGSVNED 75 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +E H A+L HDDV+D + +RRG A VWGN ++L GD + ++A MV Sbjct: 76 VIEAAVVVELTHLASLYHDDVMDSAPMRRGVETAHTVWGNTVAILTGDMIFARASAMV-- 133 Query: 124 TKSQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 S E+L + A T L G+LR+ + E YL VI KT L +A+ + Sbjct: 134 --SALGQESLMIQASTFERLVIGQLRETTGPAEGQDPLEHYLEVIAGKTGSLIAASGQYG 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G SV + YG +G+AFQL DD++D G + GK G D R G TLPV+L Sbjct: 192 ALLGGAPRSVVDLMVVYGEKVGLAFQLADDIIDLTGHPDVSGKTRGTDLREGVDTLPVLL 251 Query: 241 AFQRGTKREKNFWKSTIN-----DGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKA 294 + S N DG ++ + + + ++ A + +A Sbjct: 252 LRRDAAGDNPAAAASAQNILRLIDGDLTDDAALATAVAAVSDHPAAAEAWQIANRWADEA 311 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++L LP+S K +L+E + R Sbjct: 312 IEALAPLPESVAKAALIEFAHAVVHR 337 >gi|169600423|ref|XP_001793634.1| hypothetical protein SNOG_03045 [Phaeosphaeria nodorum SN15] gi|160705435|gb|EAT89776.2| hypothetical protein SNOG_03045 [Phaeosphaeria nodorum SN15] Length = 292 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 132/260 (50%), Gaps = 15/260 (5%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RR +A + +GN+ +VL GDFLL +A + + Sbjct: 35 LAEITELIHTASLLHDDVIDHSISRRSAPSANIEFGNKMAVLAGDFLLGRASVALARLRD 94 Query: 127 QEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVIKSKTAVLFSAALEV 179 E E L+ V L EGE QL + KN TE+ YL K+A L S + Sbjct: 95 PEVTELLATVIANLVEGEFMQLKNTARDEKNPAWTEDTVSYYLQKTYLKSASLISKSCRA 154 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++++ G V +A YG NLG+AFQLVDD+LDY E+GK G D G T P++ Sbjct: 155 AAILGGSTPEVVEAAYLYGKNLGLAFQLVDDMLDYTVSGEELGKPAGADLELGLATAPLL 214 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ K + +G ++++A I+ + L T A Y KA +++ Sbjct: 215 FAWKDNKSLGKLVGRKFSQEG-----DVQRAREIVSASTGLQQTRALAQEYVDKAIEAIS 269 Query: 300 CLPDSSWKKSLMEVVDFCLQ 319 PDS K L VD C + Sbjct: 270 SFPDSEAKTGL---VDMCTK 286 >gi|315505424|ref|YP_004084311.1| polyprenyl synthetase [Micromonospora sp. L5] gi|315412043|gb|ADU10160.1| Polyprenyl synthetase [Micromonospora sp. L5] Length = 339 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 118/219 (53%), Gaps = 11/219 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +V+Y + GK LRPM+TL A + + + A E++H ATL+HDD++D LRR Sbjct: 43 IVRYALLPAGKMLRPMMTLHAAEAVGGSPRDVLAAALGTEYLHVATLVHDDIIDADTLRR 102 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--TLAE-------G 143 G+ A + + +++ GD L+ AF ++E S A+ A S+V+ LAE G Sbjct: 103 GRPAVPVAYSIPGAIVAGDHLIFHAFQAMVE--SGRAVPAASVVSAVTALAEAGQDLCRG 160 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + L +LD Y +I+ KT LF A + +L+ G V AL YG ++G Sbjct: 161 QALEARLVGDLDAGARWYPEMIRLKTGSLFRAVCHIGALLGGADPLVASALARYGEHVGT 220 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AFQ+ DD+L Y + GK D NG+PTLP++LA+ Sbjct: 221 AFQIRDDLLSYLSTPEQTGKPATSDLNNGRPTLPLLLAY 259 >gi|317503704|ref|ZP_07961721.1| geranyltranstransferase [Prevotella salivae DSM 15606] gi|315665225|gb|EFV04875.1| geranyltranstransferase [Prevotella salivae DSM 15606] Length = 323 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/241 (32%), Positives = 128/241 (53%), Gaps = 9/241 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D VKY++ GGKR+RP+L L + + ++ ++ AC +E H TLLHDD++D++ +R Sbjct: 28 DPVKYVLSMGGKRIRPVLMLLAYGLFKDDVESILMPACGLETYHNYTLLHDDLMDNAEMR 87 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQL 148 RG W T++L GD +L A+ + + + L + A + EG+ + Sbjct: 88 RGHETVHRKWNANTAILSGDSMLVLAYERIAQCSQIYLSDVLHTFTETALEIGEGQQYDM 147 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE +Y+ +I+ KT+VL + AL++ +++AG + L +G +G+AFQL Sbjct: 148 DFETRNDVTEAEYIEMIRLKTSVLLACALKIGAILAGASKQDQDYLYKFGEQIGLAFQLQ 207 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT---KREKNFW---KSTINDGKI 262 DD LD G+ GK IG D K T +I A+ +RE W ++ ND K+ Sbjct: 208 DDYLDVYGDPKVFGKKIGGDIICNKKTYMLINAYNLANSEQRRELQHWMEAETFNNDEKV 267 Query: 263 S 263 + Sbjct: 268 A 268 >gi|293366563|ref|ZP_06613240.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|291319332|gb|EFE59701.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis M23864:W2(grey)] Length = 332 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 90/307 (29%), Positives = 158/307 (51%), Gaps = 19/307 (6%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----V 65 +++KV + + I S + + + +L+ SGGKR+RP + + ++ +N Sbjct: 22 EIKKVEKRLEEAIISSDQTLQEASFHLLSSGGKRVRPAFVILSG---QFGSNNKPSEDTY 78 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A+E IH ATL+HDDV+D S RRG++ W T++L G+FLL+ + E Sbjct: 79 RVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEIS 138 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +S + GEL Q N + T +YL I KTA+L + +V ++ + Sbjct: 139 DTRVHSTISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSN 198 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 N V + LK G +G++FQ++DDVLD+ ++GK +G D NG TLPV+L Sbjct: 199 ASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKKLGKPVGSDLMNGHITLPVLLEM--- 255 Query: 246 TKREKNFWKSTINDGKISVENLKKAF----IIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 R+ +K I+ +++ ++ + AF I+R++ ++ ++ + Y KA + + L Sbjct: 256 --RKNKTFKDKIS--QLNPDSPQHAFETCITIIRQSESIEQSKQISEKYLNKAINLIDEL 311 Query: 302 PDSSWKK 308 D K+ Sbjct: 312 EDGPNKE 318 >gi|219852944|ref|YP_002467376.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c] gi|219547203|gb|ACL17653.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c] Length = 320 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 80/238 (33%), Positives = 130/238 (54%), Gaps = 6/238 (2%) Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLACAIE 72 +V+ LI + V + +L+ +GGKRLRP ++ LA + + D+ + A A+E Sbjct: 13 QVDRLIDRYFGDPVGELNKASAHLLTAGGKRLRPAVMMLAADAVRKGSSDDLMPAAIALE 72 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--L 130 H+ TL+HDD++D +RRG W T++L GD L ++AF + + + +A L Sbjct: 73 LTHSFTLIHDDIMDGDEVRRGVPTVNKKWDEPTAILAGDVLYARAFAFICQALAMDAAKL 132 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A+S++A T E G+ ++ DV+EE+YL ++ KT L++A+ + ++AG Sbjct: 133 RAVSMLAVTCEEICAGQHLDMAFEDRDDVSEEEYLEMVGKKTGALYAASTAMGGVLAGGS 192 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL YGMN+G+AFQ+ DD++D GK+ D R GK TL I A + G Sbjct: 193 QPQVDALYRYGMNIGVAFQIQDDLIDLLASPERSGKDRASDIREGKQTLINIKAREHG 250 >gi|260912495|ref|ZP_05919030.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295] gi|260633374|gb|EEX51529.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295] Length = 324 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/245 (31%), Positives = 130/245 (53%), Gaps = 12/245 (4%) Query: 18 LILKRICSDVEMIP---------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +IL +I +E +P + ++Y++ GGKR+RP L L + + ++ + A Sbjct: 6 IILSKINDYIEALPFNRKPQSLYEPIRYVLSIGGKRIRPTLALLAYNLFKDDPESILAPA 65 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TK 125 C +E H TLLHDD++D++ALRRG W T++L GD +L A+ +V + +K Sbjct: 66 CGLETYHNYTLLHDDLMDNAALRRGMPTVHKRWDANTAILSGDSMLVLAYQLVAQCDSSK 125 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + +E + A + EG+ + DVTE++Y+ +I+ KT+VL + +++ +L+A Sbjct: 126 LKPVMELFTETALEIGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACGMKMGALLAD 185 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 L +G +G+AFQL DD LD G+ GK IG D K T +I AF + Sbjct: 186 APQQDADLLYKFGEQIGLAFQLQDDFLDVYGDSKVFGKTIGGDIVCNKKTYMLINAFNKA 245 Query: 246 TKREK 250 ++ Sbjct: 246 DASQR 250 >gi|325858516|ref|ZP_08172620.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A] gi|325483013|gb|EGC86002.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A] Length = 324 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 7/222 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 ++Y++ GGKR+RP L L + + +R D +L ACA+E H TLLHDD++DD+ LR Sbjct: 31 IRYVLSLGGKRIRPTLMLLSYNL--FRDDPETILSPACALETYHNYTLLHDDLMDDAPLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQL 148 RG+ + W T++L GD +L AF + + + + L L T + EG+ + Sbjct: 89 RGQQTVHVRWDANTAILSGDSMLVLAFERMQQCDDRHLRDVLRLFTVTALEIGEGQQYDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVTE +Y+ +I+ KT+VL + A+++ +L+A + L +G +G+AFQL Sbjct: 149 EFENRNDVTEAEYIEMIRLKTSVLLACAVKLGALLADAPAGDVENLYKFGERIGLAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 DD LD G+ GK IG D + K T +I A + R++ Sbjct: 209 DDYLDVYGDPKVFGKKIGGDITSNKKTYMLINALNKANARQR 250 >gi|257076044|ref|ZP_05570405.1| farnesyl pyrophosphate synthetase/ geranyltransferase/farnesyltransferase/hexaprenyl [Ferroplasma acidarmanus fer1] Length = 330 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/315 (31%), Positives = 167/315 (53%), Gaps = 8/315 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + +VN +L+ I +D + ++ KY I +GGKR RP+LT L+ + D+ + LA Sbjct: 15 INEVNSRLLQAIKTDQPYLFEMSKYTIDAGGKRFRPLLTILSYEISCNEPYDSILDLASG 74 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 E IHTA+L+HDD++D S RRG+ +G +++VGD+L ++A+ + + Sbjct: 75 YELIHTASLIHDDIIDKSKYRRGRETLASRYGIDNAIVVGDYLFAKAYELG-SRYGKVVS 133 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + ++ + LAEG++ + NL + E Y +I +KTA FSA E +++ A ++V Sbjct: 134 KVMADGSSHLAEGQIIEALNIGNLSLDIETYNKIIMNKTAYFFSACAEGATIAAMAPDNV 193 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R L + N+G+AFQ+ DD+LD G EMGK D + TLP+I A T K Sbjct: 194 RDKLSKFAYNMGMAFQITDDILDIVGNEKEMGKPTMVDLNHDVITLPIIHALSHVTGENK 253 Query: 251 NFWKSTIN--DGKISVENLKKAF-IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ +N GK + + K F I+ ++ +L T A Y K+ ++L + S Sbjct: 254 ---RTLVNILTGKYTDSDYKSKFRDILFKSGSLEYTFKIAKDYILKSVENLNGIGRSDDL 310 Query: 308 KSLMEVVDFCLQRLN 322 LM++ + R+N Sbjct: 311 GLLMDLALIVVDRIN 325 >gi|302504938|ref|XP_003014690.1| hypothetical protein ARB_07252 [Arthroderma benhamiae CBS 112371] gi|302660502|ref|XP_003021930.1| hypothetical protein TRV_03960 [Trichophyton verrucosum HKI 0517] gi|327306145|ref|XP_003237764.1| hexaprenyl pyrophosphate synthetase [Trichophyton rubrum CBS 118892] gi|291177996|gb|EFE33787.1| hypothetical protein ARB_07252 [Arthroderma benhamiae CBS 112371] gi|291185850|gb|EFE41312.1| hypothetical protein TRV_03960 [Trichophyton verrucosum HKI 0517] gi|326460762|gb|EGD86215.1| hexaprenyl pyrophosphate synthetase [Trichophyton rubrum CBS 118892] Length = 427 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/263 (34%), Positives = 135/263 (51%), Gaps = 15/263 (5%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RR ++A L +GN+ +VL GDFLL +A + + Sbjct: 170 LAEITELIHTASLLHDDVIDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIARLRD 229 Query: 127 QEALEALSLVACTLAEGELRQLS---LSKNLDVTEED----YLHVIKSKTAVLFSAALEV 179 E +E L V L EGE QL L ++ V ED YL K+A L S + Sbjct: 230 PEVIELLGTVMANLVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLISKSCRA 289 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ V +A +G NLG+AFQLVDD+LDY E+GK G D G T P++ Sbjct: 290 AALLNQSGPDVAEAAYLFGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLATSPLL 349 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A+++ + K + +G + + A I+ ++ L T A Y A ++ Sbjct: 350 FAWKQRPELGKLVGRKFSREGDVQL-----ARQIVSQSDGLEQTRALAQQYADDAVAAIS 404 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 PDS K L+E+ C + +N Sbjct: 405 KFPDSEAKDGLIEI---CRKTIN 424 >gi|86151722|ref|ZP_01069936.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85841351|gb|EAQ58599.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 260.94] Length = 297 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/279 (31%), Positives = 150/279 (53%), Gaps = 17/279 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GK+LR L LA A + + AIE IH A+LLHDD++D+S LRRG + Sbjct: 29 SGKKLRSKLLLAIA----DESEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAE 84 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G + ++++GD L S+AF + + ++ A +S LA GEL + L + ++ +E Sbjct: 85 FGTKNALMLGDILYSKAFYELSKLDARFA-SIISDAVVKLAIGELMDVDLGEKFNINKEA 143 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 YL +I +KTAVL A+ +++AG+ + YG NLG+AFQ++DD+LD + + Sbjct: 144 YLKMIYNKTAVLIEASARCGAILAGL---YEKDFAEYGKNLGLAFQMIDDILDIKSDEKI 200 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVENLKKAFIIMRE 276 +GK DF+ GK TLP I ++ ++++ +K +N+ + E LK F E Sbjct: 201 LGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKKDLNENE--KEWLKTKF---EE 255 Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 +AL A +Y +KA+ ++ ++ + ++D Sbjct: 256 QKALEKAILEAKTYAKKARKAIEKYDNNKLNDIIKAMID 294 >gi|315195366|gb|EFU25753.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus CGS00] Length = 319 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 9 EIKKVEQRLEKAIKSKYSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 68 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 69 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 128 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 129 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 188 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 189 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 246 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA + + Sbjct: 247 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKEVSSKYLSKALNLIS 296 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 297 ELPDGHPKSLLLSLT 311 >gi|153951500|ref|YP_001398431.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. doylei 269.97] gi|152938946|gb|ABS43687.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. doylei 269.97] Length = 297 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 90/264 (34%), Positives = 143/264 (54%), Gaps = 19/264 (7%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDDSALRRGKVAARL 99 GK+LR L LA A E CA IE IH A+LLHDD++D+S LRRG + Sbjct: 29 SGKKLRSKLLLAIADESEI-----AFKICAVIELIHLASLLHDDIIDESELRRGARSVNA 83 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 +G + ++++GD L S+AF + + ++ A +S LA GEL + L + ++ +E Sbjct: 84 EFGTKNALMLGDILYSKAFYELSKMDARFA-SIISDAVVKLAIGELMDVDLGEKFNINKE 142 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 YL +I +KTAVL A+ +++AG+ Q YG NLG+AFQ++DD+LD + + Sbjct: 143 AYLKMIYNKTAVLIEASARCGAILAGL---YEQDFAEYGKNLGLAFQMIDDILDIKSDEK 199 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVENLKKAFIIMR 275 +GK DF+ GK TLP I ++ ++++ +K +N+ + E LK F Sbjct: 200 ILGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKKDLNESE--KEWLKTKF---E 254 Query: 276 ENRALVDTEYRAYSYGQKAKDSLR 299 E +AL A +Y +KA ++ Sbjct: 255 EQKALEKAILEAKTYAKKASKAIE 278 >gi|258573655|ref|XP_002541009.1| decaprenyl-diphosphate synthase subunit 1 [Uncinocarpus reesii 1704] gi|237901275|gb|EEP75676.1| decaprenyl-diphosphate synthase subunit 1 [Uncinocarpus reesii 1704] Length = 477 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 106/351 (30%), Positives = 156/351 (44%), Gaps = 68/351 (19%) Query: 33 VVKYLIFSGGKRLRPMLTL----ATALMLEYRGDNHVLLACAI----------------- 71 V KY S GK++RP+L L ATALM D +L A + Sbjct: 130 VAKYYARSEGKQVRPLLVLLISQATALMPRSPRDRQILDAAGVNAAISSPAILADTNPDY 189 Query: 72 -----------------------------------EFIHTATLLHDDVVDDSALRRGKVA 96 E IHTA+LLHDDV+D++ RR V+ Sbjct: 190 NLLTAPSLTGNETAYTFAESDENILPSQRRLAEITELIHTASLLHDDVIDNAVTRRSGVS 249 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----K 152 A L +GN+ +VL GDFLL +A + + E E ++ V L EGE QL + + Sbjct: 250 ANLEFGNKMAVLAGDFLLGRASVALARLRDPEVTELMATVIANLVEGEFMQLRNTAQDER 309 Query: 153 NLDVTEE---DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 N TE+ YL K+A L S + ++L+ V +A SYG NLG+AFQLVD Sbjct: 310 NPAWTEDIITYYLQKTYLKSASLISKSCRSAALLGHGAPDVVEAAYSYGRNLGLAFQLVD 369 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LDY E+GK G D G T P++ A++ + + ++G + + Sbjct: 370 DMLDYTISGEELGKPAGADLELGLATAPLLFAWKSHPELGALVGRKFCHEGDVQL----- 424 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A I+ ++ L T A Y KA ++ PDS K+ L++ + + R Sbjct: 425 ARQIVSQSDGLEQTRALAQEYSDKAVQAISIFPDSEAKRGLIDTCEKVMIR 475 >gi|332019800|gb|EGI60261.1| Decaprenyl-diphosphate synthase subunit 1 [Acromyrmex echinatior] Length = 337 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 87/303 (28%), Positives = 150/303 (49%), Gaps = 11/303 (3%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVL-----LACAIEFIHTAT 78 + +E + + Y GK +RPM T+ A + Y +G N +L +A E IH A+ Sbjct: 39 TSLEELQPISTYYFDGQGKAVRPMFTILMARAINYHKGRNDLLYSQRQIAMISEMIHNAS 98 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 LLHDDV+D S RRGK + ++W + + G+++LS A M+ E S + ++S + Sbjct: 99 LLHDDVIDQSDFRRGKPSVNVLWSQKKVAMAGNYILSIACMMLSEIHSDDVTISISQLIS 158 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L +GE QL + + YL KTA L + ++ ++++ V + YG Sbjct: 159 DLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCMKGVAILSNVDERTIEMAFQYG 218 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 N+G+AFQLVDD+LD+ MGK D + G T PV+ A +R + + I Sbjct: 219 RNVGLAFQLVDDLLDFVASTTAMGKPTAADLKLGLATAPVLFACERYPE-----LNAMIM 273 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 +++KAF ++ ++ L T + A + +A + S ++K+L+ + D + Sbjct: 274 RRFQEPRDVEKAFELVHKSNGLEQTRFLAKKHCAEASKIAQSFTKSPYQKALIIMADLVI 333 Query: 319 QRL 321 R+ Sbjct: 334 NRM 336 >gi|306820179|ref|ZP_07453823.1| heptaprenyl diphosphate synthase component II [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551780|gb|EFM39727.1| heptaprenyl diphosphate synthase component II [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 317 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 112/211 (53%), Gaps = 3/211 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GK LRP L L A + +N LA +E H A+L+HDD+VD+S RRGK + + Sbjct: 33 GKMLRPKLLLLCAFLGSNWKNNREKICKLAAMVELTHLASLIHDDIVDNSPYRRGKTSLQ 92 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +G +V GDFL+S+ F E EA+ LS + GE+ Q D++E Sbjct: 93 GKYGKDAAVFAGDFLISRIFHYGTEENLNEAVSVLSKTVEYMCIGEIEQDLNRYREDISE 152 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + Y +I++KTA LF A + + AG + L+ + NLG+ FQL DD+LD+ Sbjct: 153 KKYFEIIENKTAALFQVACHIGAKEAGCSEENIKKLELFVKNLGLMFQLKDDILDFTSNS 212 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++GK +DF+NG T PVI+ + RE Sbjct: 213 KDLGKETHKDFQNGIYTFPVIMTLKNSRGRE 243 >gi|313887289|ref|ZP_07820980.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I] gi|312923208|gb|EFR34026.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I] Length = 328 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 150/299 (50%), Gaps = 8/299 (2%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLLHDDV 84 D ++ +++L S GK +RP++ A + + + L A IE +HTA+L+HDDV Sbjct: 32 DAPVLSHALEHLRLSSGKHIRPIIVGLCAQLCAGQTNEQTLSAALVIELLHTASLIHDDV 91 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETKSQEALEALSLVACTLAEG 143 +D S RRG+ ++ N +VL+GD++LS AF +V + E L ++ L+ G Sbjct: 92 IDWSDTRRGQPTLNALYSNHQAVLMGDYVLSTAFLELVSREHTPEMLRVVAQAGRDLSIG 151 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 EL QLSLSK EEDY V+ KT LF A+ ++ +L + G +G Sbjct: 152 ELMQLSLSKAHTYREEDYYAVVDRKTGALFEASAKLGALSVDATEEQVKRCSRLGQLMGR 211 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND--GK 261 AFQL DD+ DY ++ +GK G D GK +LP++ T E++ S + G Sbjct: 212 AFQLQDDLFDYDKALD-VGKPTGHDLIEGKVSLPLLYVLNHATPTERDEIISYLQQPIGS 270 Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 S+E L + I E + TE + Q+A + LR SS +++L + +R Sbjct: 271 DSIEYLLR---IAHERGGIDYTERQIQHIHQEAINLLRSFTPSSTRETLERFITLLGER 326 >gi|57238259|ref|YP_178660.1| polyprenyl synthetase family protein [Campylobacter jejuni RM1221] gi|57167063|gb|AAW35842.1| polyprenyl synthetase family protein [Campylobacter jejuni RM1221] gi|284925804|gb|ADC28156.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315057959|gb|ADT72288.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni S3] Length = 297 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 87/281 (30%), Positives = 153/281 (54%), Gaps = 21/281 (7%) Query: 41 GGKRLRP--MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GK+LR +LT+A + ++ + AIE IH A+LLHDD++D+S LRRG + Sbjct: 29 SGKKLRSKLLLTIADESEIAFK------ICAAIELIHLASLLHDDIIDESELRRGARSVN 82 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +G + ++++GD L S+AF + + ++ A +S LA GEL + L + ++ + Sbjct: 83 AEFGTKNALMLGDILYSKAFYELSKMDARFA-SIISDAVVKLAIGELMDVDLGEKFNINK 141 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 E YL +I +KTAVL A+ +++AG+ + YG NLG+AFQ++DD+LD + + Sbjct: 142 EAYLKMIYNKTAVLIEASARCGAILAGL---YEKDFAEYGKNLGLAFQMIDDILDIKSDE 198 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVENLKKAFIIM 274 +GK DF+ GK TLP I ++ ++++ +K +N+ + E LK F Sbjct: 199 KILGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKKDLNENE--KEWLKTKF--- 253 Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 E +AL A +Y +KA+ ++ ++ + ++D Sbjct: 254 EEQKALEKAILEAKTYAKKARKAIEKYDNNKLNDIIKAMID 294 >gi|16081558|ref|NP_393914.1| bifunctional short chain isoprenyl diphosphate synthase related protein [Thermoplasma acidophilum DSM 1728] gi|10639606|emb|CAC11578.1| bifunctional short chain isoprenyl diphosphate synthase related protein [Thermoplasma acidophilum] Length = 322 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 164/325 (50%), Gaps = 32/325 (9%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL----L 67 +E+VN +L+ + S+ + + +Y I +GGKR RP+LT+ L E D L Sbjct: 11 VEEVNARLLETVKSEEPDLDRMARYTIEAGGKRFRPLLTI---LAYESSTDEPYFKILDL 67 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A E IHTA+L+HDD++D+S +RRG+ G +++V D+L ++A+ E S+ Sbjct: 68 ATGYELIHTASLIHDDIIDNSPMRRGRPTLSYKEGVNNAIVVADYLFAKAY----ELGSR 123 Query: 128 EAL---EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 + ++ + LAEG++ + NL+++E+ Y +I++KTA F A +++ A Sbjct: 124 YGPIVSKVMADASSRLAEGQILEAVNLGNLNISEDTYYRIIENKTAHFFEACARGATIAA 183 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + R L + NLG+AFQ+ DD+LD G+ GK D ++ TLP+I A Sbjct: 184 NADLNTRNMLSGFAFNLGMAFQVTDDILDITGDDKYTGKPTFVDIKHDALTLPIIYALHN 243 Query: 245 GTKREKNFWKSTINDGKISVEN--LKKAFIIMRENRALVDTEYRAYSYG------QKAKD 296 + +++ IN G I ++ LK+ F+ +D YS+G A D Sbjct: 244 SDENDRDKIVGMIN-GSIEIDKDLLKRIFL----RSGAID-----YSFGIAKRFITSAMD 293 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321 L+ + S LME+ + R+ Sbjct: 294 YLKNVTRSPDIDLLMELALMVIDRI 318 >gi|297563981|ref|YP_003682954.1| Trans-hexaprenyltranstransferase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848430|gb|ADH70448.1| Trans-hexaprenyltranstransferase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 334 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 92/313 (29%), Positives = 158/313 (50%), Gaps = 9/313 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++EKV L+ + + S ++ + +L+ +GGKR R L L A + + + A Sbjct: 26 NLEKVEDLLRESVASSDPLLTEAASHLLAAGGKRFRATLVLLAAHFGDPSVPDLIPAAAV 85 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E H ATL HDDV+D++ LRRG+ +A WGN ++L GD++ ++A M+ + + Sbjct: 86 VELTHVATLYHDDVMDEAELRRGEPSANQRWGNSVAILTGDYVFARASEMLADLGT---- 141 Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 EA+ L A T L +G++ + S + + YL VI KTA L +++ E + V Sbjct: 142 EAVRLQATTFGRLVQGQILETSGPQEGTDPLDHYLRVISDKTASLIASSAEFGGMFGKVD 201 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + LG+AFQL DD+LD E + GK G D R G TLP+ A + Sbjct: 202 PETIGTVTRACDALGMAFQLADDLLDVASESTDSGKTPGTDLREGVLTLPMFYALRSRDA 261 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ KS + + E ++A ++R + A+ + E + KA+ L LP+S + Sbjct: 262 ADERL-KSLLGR-PLDDEEAEEALALLRVHPAMAEAEATLRGWADKARAELATLPESPAR 319 Query: 308 KSLMEVVDFCLQR 320 + + D+ ++R Sbjct: 320 GAFEALCDYVVER 332 >gi|45656805|ref|YP_000891.1| octaprenyl diphosphate synthase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600041|gb|AAS69528.1| octaprenyl diphosphate synthase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 319 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 126/233 (54%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I D++++ ++ Y I SGGKR+RP+L +L Y G + + + E IH A+LLHD Sbjct: 22 IREDLKILSEIKTYTIQSGGKRIRPILHYCLCQLLGYSGKHWLDVGAIAELIHAASLLHD 81 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DVVD++ RRG + +GN+T++L GD+LL+ + E +E + V L+ Sbjct: 82 DVVDEAETRRGLQSVGSKFGNKTAILAGDYLLACGIDHLNGLGYPELMEVFTQVIKDLSV 141 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 EL Q+ KN +T + Y +I KTA LF+ + +++ ++ L+ +G++LG Sbjct: 142 SELIQMEWEKNPKITLDIYNKIIYGKTASLFAVVCVSAGILSDKNEKEKKKLRQFGIDLG 201 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 FQ DD +DY ++ GK +DF NG T P++L R + +K S Sbjct: 202 SFFQKKDDAIDYFTSASKSGKIPLKDFYNGLYTHPILLLLDRADRNDKKLIHS 254 >gi|183220059|ref|YP_001838055.1| octoprenyl-diphosphate synthase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910179|ref|YP_001961734.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774855|gb|ABZ93156.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778481|gb|ABZ96779.1| Octoprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase; OPP synthetase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 317 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 118/218 (54%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I D+ ++ + K +I SGGKR+RP + + + + + E IH A+LLHD Sbjct: 22 IHEDIPILKKIKKQVITSGGKRIRPFSHYLFCQFMNVKDVSWLDVGSVAELIHAASLLHD 81 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DVVD++ +RRGK +GN+T++L GD+LL+ + + + +E S V L+ Sbjct: 82 DVVDNAPIRRGKPTIGASFGNKTAILAGDYLLACGISRLNSLGNPDLMEIFSQVLRDLSV 141 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 EL Q+ KN ++T + Y +I KTA LF E ++++A R+ + +G+ LG Sbjct: 142 SELLQMEWEKNPNITLKIYDQIIYGKTASLFGVCTEAAAILANQSKEKRKEFRQFGVRLG 201 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 FQ DD LDY + GK +DF+NG T PV++ Sbjct: 202 KLFQKKDDCLDYFEDSKASGKEFLKDFKNGLFTYPVLV 239 >gi|154508652|ref|ZP_02044294.1| hypothetical protein ACTODO_01153 [Actinomyces odontolyticus ATCC 17982] gi|153798286|gb|EDN80706.1| hypothetical protein ACTODO_01153 [Actinomyces odontolyticus ATCC 17982] Length = 337 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/325 (30%), Positives = 157/325 (48%), Gaps = 8/325 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-- 61 LE +E V +L + S ++ ++ ++L +GGKR+RP+LTL A + E Sbjct: 13 LESRITPGLEVVERRLLDAVSSSRDLTDELTRHLAVAGGKRMRPLLTLVCAQLGEPERAL 72 Query: 62 DNHVLLAC-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D V+ A A+E H A+L HDDV+D + RRG +A+ +WGN ++L GD L ++A + Sbjct: 73 DEQVITAATAVELTHLASLYHDDVMDSAPTRRGVPSAQHLWGNNRAILAGDILFARA-SL 131 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + E + + L EG+L + + + YL V+ KT L S A Sbjct: 132 LVASLGPEMVAHHARTFERLCEGQLNETFGPTDGADRVDFYLQVLADKTGSLVSTAASFG 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L++G + + +G +G+AFQ+ DDVLD + GK G D R G TLPV+L Sbjct: 192 ALLSGAGKLMADVVSDFGEKVGVAFQIADDVLDLASSGEQSGKTPGTDLREGVDTLPVLL 251 Query: 241 AFQR---GTKREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 +R GT E G +S E L +R + L +T A ++ A Sbjct: 252 LRRREAAGTIDEVGARILRELTGDLSSDEALASVVEQLRSHDVLEETRELARTWANDAVA 311 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321 +L LP K +L + + RL Sbjct: 312 TLAPLPKGEAKTALEAFANLMVDRL 336 >gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410699|gb|ABP67703.1| farnesyl-diphosphate synthase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 298 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 85/245 (34%), Positives = 138/245 (56%), Gaps = 18/245 (7%) Query: 31 PDVV----KYLIFSGGKRLRPMLTLATALMLEYR-GDNHVL-LACAIEFIHTATLLHDDV 84 PDV+ +Y +F+GGKRLRP+L L + +L + D VL +ACAIE IHT +L+HDD+ Sbjct: 30 PDVIYEAMRYSVFAGGKRLRPILCLLSYELLSGKEADEKVLDIACAIELIHTYSLIHDDL 89 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA----FCMVIETKSQEAL--EALSLV 136 +D+ LRRGK +V+G ++L GD LL++A F ++ K++E A L Sbjct: 90 PAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNKAAEVCFNWILRNKAKENFIKAAEYLF 149 Query: 137 ACTLAEGELRQLSL---SKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQ 192 + EG + + + ++TEE+ L+ + KT+ L A+ + +AG + V Sbjct: 150 KASGTEGMIGGQVIDVVNSGKEITEENLLYEMHLKKTSKLIQASCVCGAYVAGAKEEVIS 209 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 + YG NLG+AFQ+ DD+LD+ G+ ++GK+IG+D + K T ++ ++F Sbjct: 210 DFEEYGKNLGLAFQIRDDILDFIGDSKKVGKSIGKDIKEKKNTFVTFYGIEKAQNYVESF 269 Query: 253 WKSTI 257 K I Sbjct: 270 SKKAI 274 >gi|303231368|ref|ZP_07318102.1| polyprenyl synthetase [Veillonella atypica ACS-049-V-Sch6] gi|302513964|gb|EFL55972.1| polyprenyl synthetase [Veillonella atypica ACS-049-V-Sch6] Length = 323 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 126/239 (52%), Gaps = 1/239 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++M+E + L D+E V + + E +++ L +GGKRLR L L A Sbjct: 7 LEMMERIAL-DLEGVERALASSFNTGSEDFNTLIRPLSEAGGKRLRAQLCLLIANAGTSV 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E +H ATL+HDDV+D + +RRG+ GN+ ++L GD+L ++AF + Sbjct: 66 EAERIKIAEAVEMLHLATLIHDDVLDQAEIRRGEETIHKHKGNKVAILSGDYLFAKAFRI 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E E L+ S + L EGE Q+ +D + Y+ + KTA +E+ Sbjct: 126 VSEMPHMEYLKIFSHIITCLVEGEFMQMEDVYRIDQGIDRYMTKTQKKTADFMEGCMELG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 L+ G + LK YG LG+AFQ+ DD++DYR + GK +G D R G T P++ Sbjct: 186 GLLGGWSSDEIMYLKRYGHALGMAFQITDDIMDYRETSDTTGKPVGNDLREGLLTYPLL 244 >gi|293375911|ref|ZP_06622172.1| polyprenyl synthetase [Turicibacter sanguinis PC909] gi|325838688|ref|ZP_08166603.1| polyprenyl synthetase [Turicibacter sp. HGF1] gi|292645433|gb|EFF63482.1| polyprenyl synthetase [Turicibacter sanguinis PC909] gi|325490738|gb|EGC93045.1| polyprenyl synthetase [Turicibacter sp. HGF1] Length = 318 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 80/238 (33%), Positives = 131/238 (55%), Gaps = 8/238 (3%) Query: 11 DMEKVNFLILKRICSD------VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 D + N L+LK + SD +M+ D+++ +I +GGKR+RP+ L A + E Sbjct: 10 DEQYFNDLLLKAVSSDSTLFSDPKMMNDLLQ-IIMNGGKRIRPLFVLLAADLKENVNKQE 68 Query: 65 VLLAC-AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A AIE +H A+L+HDD++D+S R + V +G+F+L+++ + E Sbjct: 69 IYTAAVAIELMHVASLIHDDIIDESTTRHNVTTLHEQYSLTVGVHLGNFVLNKSLELFSE 128 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K + + +++V L GEL Q N D++ +DY++ KT L S +L V L+ Sbjct: 129 FKIPKLHQEIAVVMNNLCLGELNQQHNHFNFDLSFDDYINKSYQKTGALISLSLVVGGLV 188 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 AG+ ++ L + G +GIA+QL DD+LD+ ++GK +G D RNG TLP I A Sbjct: 189 AGLDANIINQLSTIGSQIGIAYQLKDDILDFTSTSKKIGKPVGYDLRNGIITLPTIFA 246 >gi|322709158|gb|EFZ00734.1| decaprenyl-diphosphate synthase subunit 1 [Metarhizium anisopliae ARSEF 23] Length = 420 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 12/261 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + + Sbjct: 163 LAEITELIHTASLLHDDVIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRH 222 Query: 127 QEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E L+ V L EGE QL + ++ +EE YL KTA L S + Sbjct: 223 VEVVELLATVIANLVEGEFMQLKNTERDERSPKYSEETLSYYLQKTYLKTASLISKSCRA 282 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ + A SYG NLG+AFQLVDD+LDY ++GK G D G T P++ Sbjct: 283 AALLGNADATTVDAAYSYGRNLGLAFQLVDDMLDYTRSGKDLGKPAGADLELGLATAPLL 342 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A+++ + + +G +++KA ++ ++ + T A Y +KA ++ Sbjct: 343 FAWKQNPELGALVGRKFEREG-----DVEKARDLVLKSDGIEQTRALAQDYSEKAIAAIA 397 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 P+S K L+E+ ++R Sbjct: 398 DFPESEAKDGLIEMAQKTIKR 418 >gi|303229377|ref|ZP_07316167.1| polyprenyl synthetase [Veillonella atypica ACS-134-V-Col7a] gi|302515913|gb|EFL57865.1| polyprenyl synthetase [Veillonella atypica ACS-134-V-Col7a] Length = 323 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 126/239 (52%), Gaps = 1/239 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++M+E + L D+E V + + E +++ L +GGKRLR L L A Sbjct: 7 LEMMERIAL-DLEGVERALASSFNTGSEDFNTLIRPLSEAGGKRLRAQLCLLIANAGTSV 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E +H ATL+HDDV+D + +RRG+ GN+ ++L GD+L ++AF + Sbjct: 66 EAERIKIAEAVEMLHLATLIHDDVLDQAEIRRGEETIHKHKGNKVAILSGDYLFAKAFRI 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E E L+ S + L EGE Q+ +D + Y+ + KTA +E+ Sbjct: 126 VSEMPHMEYLKIFSHIITCLVEGEFMQMEDVYRIDQGIDRYMTKTQKKTADFMEGCMELG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 L+ G + LK YG LG+AFQ+ DD++DYR + GK +G D R G T P++ Sbjct: 186 GLLGGWSSDEIMYLKRYGHALGMAFQITDDIMDYRETSDTTGKPVGNDLREGLLTYPLL 244 >gi|283955963|ref|ZP_06373453.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 1336] gi|283792623|gb|EFC31402.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 1336] Length = 297 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/263 (33%), Positives = 143/263 (54%), Gaps = 17/263 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GK+LR L LA A + + AIE IH A+LLHDD++D+S LRRG + Sbjct: 29 SGKKLRSKLLLAIA----DESEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAE 84 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G + ++++GD L S+AF + + ++ A +S LA GEL + L + ++ +E Sbjct: 85 FGTKNALMLGDILYSKAFYELSKMDARFA-SIISDAVVKLAIGELMDVDLGEKFNINKEA 143 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 YL +I +KTAVL A+ +++AG+ + YG NLG+AFQ++DD+LD + + Sbjct: 144 YLKMIYNKTAVLIEASARCGAILAGL---YEKDFAEYGKNLGLAFQMIDDILDIKSDEKI 200 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVENLKKAFIIMRE 276 +GK DF+ GK TLP I ++ ++++ +K +N+ + E LK F E Sbjct: 201 LGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKKDLNENE--KEWLKTKF---EE 255 Query: 277 NRALVDTEYRAYSYGQKAKDSLR 299 +AL A +Y +KA ++ Sbjct: 256 QKALEKAILEAKTYAKKASKAIE 278 >gi|88596918|ref|ZP_01100154.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|88190607|gb|EAQ94580.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 84-25] Length = 297 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/263 (33%), Positives = 143/263 (54%), Gaps = 17/263 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GK+LR L LA A + + AIE IH A+LLHDD++D+S LRRG + Sbjct: 29 SGKKLRSKLLLAIA----DESEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAE 84 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G + ++++GD L S+AF + + ++ A +S LA GEL + L + ++ +E Sbjct: 85 FGTKNALMLGDILYSKAFYELSKMDARFA-SIISDAVVKLAIGELMDVDLGEKFNINKEA 143 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 YL +I +KTAVL A+ +++AG+ + YG NLG+AFQ++DD+LD + + Sbjct: 144 YLKMIYNKTAVLIEASARCGAILAGL---YEKDFAEYGKNLGLAFQMIDDILDIKSDEKI 200 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVENLKKAFIIMRE 276 +GK DF+ GK TLP I ++ ++++ +K +N+ + E LK F E Sbjct: 201 LGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKKDLNENE--KEWLKTKF---EE 255 Query: 277 NRALVDTEYRAYSYGQKAKDSLR 299 +AL A +Y +KA ++ Sbjct: 256 QKALEKAILEAKTYAKKASKAIE 278 >gi|322693011|gb|EFY84889.1| decaprenyl-diphosphate synthase subunit 1 [Metarhizium acridum CQMa 102] Length = 449 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 12/261 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + + Sbjct: 192 LAEITELIHTASLLHDDVIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRH 251 Query: 127 QEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E L+ V L EGE QL + ++ +EE YL KTA L S + Sbjct: 252 VEVVELLATVIANLVEGEFMQLKNTERDERSPKYSEETLSYYLQKTYLKTASLISKSCRA 311 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ + A SYG NLG+AFQLVDD+LDY ++GK G D G T P++ Sbjct: 312 AALLGNADATTVDAAYSYGRNLGLAFQLVDDMLDYTRSGKDLGKPAGADLELGLATAPLL 371 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A+++ + + +G +++KA ++ ++ + T A Y +KA ++ Sbjct: 372 FAWKQNPELGALVGRKFEREG-----DVEKARDLVLKSDGIEQTRALAQDYSEKAIAAIA 426 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 P+S K L+E+ ++R Sbjct: 427 DFPESEAKDGLIEMAQKTIKR 447 >gi|262201095|ref|YP_003272303.1| trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247] gi|262084442|gb|ACY20410.1| Trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247] Length = 338 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/320 (28%), Positives = 154/320 (48%), Gaps = 13/320 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-ACA 70 +++V L+L + S +++ + +L +GGKR RPM + A E + V+ A Sbjct: 23 LQRVEDLLLAELSSGDDVMTEAATHLAKAGGKRFRPMFAVLAAQFGERPDADEVITSATV 82 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ATL HDDV+D++ LRRG +A W N ++L GDFL ++A +V S Sbjct: 83 VEMIHLATLYHDDVMDEAPLRRGAPSANARWSNSVAILSGDFLFARASRLV----STLGP 138 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A+ ++A T AE G++R+ K E YL V+ KT L +AA ++ +G Sbjct: 139 DAVRIIAETFAELVTGQMRETVGVKAGGDPIEHYLRVVWEKTGSLIAAAGRFGAMASGAT 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + L G +G AFQ+ DD++D + GK G D R G TLPV+ A + Sbjct: 199 PDDVERLSRIGDVVGTAFQVSDDIIDISSVTGDSGKTPGTDLREGVHTLPVLYALRSDDA 258 Query: 248 REKNFWKSTI-NDGKISV----ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + + + DG + + +A ++ + + R S+ +A L L Sbjct: 259 SSQRLRQLLVAADGTARPLTDDDEVAEAIELLGSSSGMSQAHARLQSFADEADAELAQLA 318 Query: 303 DSSWKKSLMEVVDFCLQRLN 322 D ++L +V + + R+ Sbjct: 319 DGPAHQALSSLVRYTVDRMG 338 >gi|315047266|ref|XP_003173008.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma gypseum CBS 118893] gi|311343394|gb|EFR02597.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma gypseum CBS 118893] Length = 491 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/263 (34%), Positives = 135/263 (51%), Gaps = 15/263 (5%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RR ++A L +GN+ +VL GDFLL +A + + Sbjct: 234 LAEITELIHTASLLHDDVIDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIARLRD 293 Query: 127 QEALEALSLVACTLAEGELRQLS---LSKNLDVTEED----YLHVIKSKTAVLFSAALEV 179 E +E L V L EGE QL L ++ V ED YL K+A L S + Sbjct: 294 PEVIELLGTVMANLVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLISKSCRA 353 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ V +A +G NLG+AFQLVDD+LDY E+GK G D G T P++ Sbjct: 354 AALLNQSGPEVAEAAYLFGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLATSPLL 413 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A+++ + K + +G + + A I+ ++ L T A Y A ++ Sbjct: 414 FAWKQRPELGKLVGRKFSREGDVQL-----ARQIVAQSDGLEQTRALAQQYADDAVAAIS 468 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 PDS K L+E+ C + +N Sbjct: 469 KFPDSEAKDGLIEI---CRKTIN 488 >gi|259502679|ref|ZP_05745581.1| polyprenyl synthetase [Lactobacillus antri DSM 16041] gi|259169324|gb|EEW53819.1| polyprenyl synthetase [Lactobacillus antri DSM 16041] Length = 288 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 148/289 (51%), Gaps = 10/289 (3%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 +GGK LRP L L + M + V LA +IE +H ATL+HDD++DDS RRG V+ Sbjct: 4 NGGKYLRPALLLLVSRMFTTDSQDDERLVKLAASIEVLHMATLIHDDIIDDSPERRGAVS 63 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-TLAEGELRQLSLSKNLD 155 + +G T+V GD L + F +++E A ++ A + +GEL Q+ NL Sbjct: 64 IQARFGKDTAVYAGDLLFTIFFDLLLEAIPSSAYLRVNAQAMRQILDGELGQMGQRFNLQ 123 Query: 156 VTEEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 T DYL +K KTA LF AA E + G + V A ++G LGIAFQ++DD+LDY Sbjct: 124 QTLADYLANVKGKTAALFKLAAQEGAHFAGGTADQVASA-AAFGQQLGIAFQMLDDILDY 182 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK-ISVENLKKAFII 273 G E+ K + ED G +LPV+LA Q + K + G+ ++ ++++ Sbjct: 183 TGG-KELNKPVLEDLATGVYSLPVLLALQDPASAAQ--VKPLLAKGRQLTATDIQRVQQY 239 Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 + A+ + A + Q A L LP + ++ L + L+R N Sbjct: 240 VIAGGAVKKSRQLASQFTQGALTDLTKLPATKARRLLQHMTSQLLKRTN 288 >gi|67524619|ref|XP_660371.1| hypothetical protein AN2767.2 [Aspergillus nidulans FGSC A4] gi|40744019|gb|EAA63201.1| hypothetical protein AN2767.2 [Aspergillus nidulans FGSC A4] Length = 1092 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/277 (34%), Positives = 141/277 (50%), Gaps = 20/277 (7%) Query: 58 EYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112 ++ GD ++L LA E IHTA+LLHDDV+D++ RR +A + +GN+ +VL GDF Sbjct: 814 DFAGDENILPSQRRLAEITELIHTASLLHDDVIDNALTRRSSNSANIEFGNKMAVLAGDF 873 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVI 165 LL +A + + E E L+ V L EGE QL + KN T++ YL Sbjct: 874 LLGRASVALARLRDPEVTELLATVIANLVEGEFMQLKNTAEDEKNPVFTDDTISYYLQKT 933 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA L S + ++L+ V +A SYG NLG+AFQLVDD+LDY E+GK Sbjct: 934 YLKTASLISKSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYTVSGVELGKPA 993 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 G D G T P++ A+++ + + +G + K ++ R N + T Sbjct: 994 GADLELGLATAPLLFAWKQHPELGPLVGRKFCREGDVE----KARELVYRAN-GVEQTRA 1048 Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 A Y KA ++ PDS K L+E+ C + +N Sbjct: 1049 LAQEYADKAIAAISPFPDSEAKAGLIEM---CRKTMN 1082 >gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs] gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs] Length = 295 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/228 (34%), Positives = 135/228 (59%), Gaps = 15/228 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 +KY +F+GGKRLRP+L+LA+ M + + AC IE IHT +L+HDD+ +D+ R Sbjct: 36 MKYSLFAGGKRLRPILSLASYQMFRDDIEEVMPYACGIEMIHTYSLIHDDLPAMDNDDYR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--------ALEALSLVACT--LA 141 RGK+ V+ ++L GD LL+ +F +++E ++ A++ +S A + Sbjct: 96 RGKLTNHKVYNEGVAILAGDGLLNYSFELMLENAIKQNDIYKHIVAIKEISNSAGVHGMI 155 Query: 142 EGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ L S +K +D DY+H+ +KTA L + +L+V ++IAG Q + ++ G+N Sbjct: 156 GGQVVDLESENKIIDKEMLDYIHI--NKTAALITTSLKVGAIIAGAQEEDIRNMEKVGLN 213 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 LG+AFQ+ DD+LD G+ ++GK+IG D K T P ++ + ++ Sbjct: 214 LGLAFQIKDDILDVVGDEAKLGKSIGRDLEKHKSTYPALIGLEASIEK 261 >gi|313623140|gb|EFR93406.1| heptaprenyl diphosphate synthase component II [Listeria innocua FSL J1-023] Length = 321 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 152/294 (51%), Gaps = 13/294 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVV 85 E D +L+ +GGKR+RPM +A L D + AIE IH A+++HDDVV Sbjct: 31 ETTSDAALHLLEAGGKRIRPMFVCLSA-RLSPNADFEAVKNAGVAIELIHMASIVHDDVV 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 DD+ LRRG+ + WGN ++ GDFL +++ + E K A + LS V L+ GE+ Sbjct: 90 DDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEI 149 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 QL N D + +YL IK KTA+L +A+ + +++G + + L +G +G+AF Sbjct: 150 EQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYKKLYRFGYYVGMAF 209 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 Q+ DDVLD+ G E+GK GED G TLPV A E F K I+ E Sbjct: 210 QITDDVLDFVGTEKELGKPAGEDLSQGNVTLPVFFAM------EDPFLKKRISQVTEDTE 263 Query: 266 NLKKAFIIMR-ENRALVDTEYRAYSYGQKAK---DSLRCLPDSSWKKSLMEVVD 315 + A ++ + E A +Y +KA DSL +P+ K ++ V+D Sbjct: 264 AEEIAALVEEIKKSGAKKAEDVATAYLKKAVATLDSLPQVPELKPLKQIVRVLD 317 >gi|330927830|ref|XP_003302019.1| hypothetical protein PTT_13690 [Pyrenophora teres f. teres 0-1] gi|311322852|gb|EFQ89885.1| hypothetical protein PTT_13690 [Pyrenophora teres f. teres 0-1] Length = 385 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/261 (34%), Positives = 133/261 (50%), Gaps = 12/261 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RR +A + +GN+ +VL GDFLL +A + + Sbjct: 128 LAEITELIHTASLLHDDVIDHSVSRRSAPSANVEFGNKMAVLAGDFLLGRASVALARLRD 187 Query: 127 QEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVIKSKTAVLFSAALEV 179 E E L+ V L EGE QL + KN TE+ YL K+A L S + Sbjct: 188 PEVTELLATVIANLVEGEFMQLKNTARDEKNPAWTEDTVSYYLQKTYLKSASLISKSCRA 247 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++++ G V +A YG NLG+AFQLVDD+LDY E+GK G D G T P++ Sbjct: 248 AAILGGSTPDVVEAAYLYGKNLGLAFQLVDDMLDYTVSEAELGKPAGADLELGLATAPLL 307 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ + + G ++++A I+ + L T A Y KA D++ Sbjct: 308 FAWKEDESLGRLVGRKFSQKG-----DVQRAREIVARSSGLEQTRALAQEYVDKAMDAIS 362 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 P+S K L+E+ ++R Sbjct: 363 FFPESEAKTGLVEMCTKVMKR 383 >gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila LSv54] gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila LSv54] Length = 298 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 26/262 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 + ++Y +F+GGKR+RP+L LA A + E +N + +ACA+E IHT +L+HDD+ +D Sbjct: 34 EAMRYSLFAGGKRIRPILCLAAADSICAQERTQENLLPVACALECIHTYSLIHDDLPAMD 93 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL---AEG 143 D LRRGK +++G ++L GD LLS AF ++ + L C + A G Sbjct: 94 DDQLRRGKATNHVLYGEAGAILAGDGLLSWAFDLIADRGKGNLTAEKRLDICHMVARAAG 153 Query: 144 EL-----RQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L +QL + S+N ++ + + +SKT L + ++ ++ AG AL+ Y Sbjct: 154 SLGMVGGQQLDIQSENKEIDFDTLATIHRSKTGALITCSIMSGAIGAGANAKQLHALEEY 213 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LD E+GK G D +GK T P+ + REK Sbjct: 214 GNNIGLAFQIIDDLLDATATTEELGKTAGSDAEHGKATYPLFFGIDK--TREK------- 264 Query: 258 NDGKISVENLKKAFIIMRENRA 279 K +V+N KA + ++RA Sbjct: 265 --AKAAVDNAIKALTLF-DHRA 283 >gi|326476521|gb|EGE00531.1| hexaprenyl pyrophosphate synthetase [Trichophyton tonsurans CBS 112818] gi|326484900|gb|EGE08910.1| hexaprenyl pyrophosphate synthetase Coq1 [Trichophyton equinum CBS 127.97] Length = 491 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 133/261 (50%), Gaps = 12/261 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RR ++A L +GN+ +VL GDFLL +A + + Sbjct: 234 LAEITELIHTASLLHDDVIDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIARLRD 293 Query: 127 QEALEALSLVACTLAEGELRQLS---LSKNLDVTEED----YLHVIKSKTAVLFSAALEV 179 E +E L V L EGE QL L ++ V ED YL K+A L S + Sbjct: 294 PEVIELLGTVMANLVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLISKSCRA 353 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ V +A +G NLG+AFQLVDD+LDY E+GK G D G T P++ Sbjct: 354 AALLNQSGPDVAEAAYLFGRNLGLAFQLVDDMLDYTISGEELGKPAGADLELGLATSPLL 413 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A+++ + K + +G + + A I+ ++ L T A Y A ++ Sbjct: 414 FAWKQRPELGKLVGRKFSREGDVQL-----ARQIVSQSDGLEQTRALAQQYADDAVAAIS 468 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 PDS K L+E+ + R Sbjct: 469 KFPDSEAKDGLIEICRKTINR 489 >gi|151221591|ref|YP_001332413.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus str. Newman] gi|294848433|ref|ZP_06789179.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9754] gi|295407219|ref|ZP_06817019.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8819] gi|297244643|ref|ZP_06928526.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8796] gi|150374391|dbj|BAF67651.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus str. Newman] gi|294824459|gb|EFG40882.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9754] gi|294967932|gb|EFG43961.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8819] gi|297178673|gb|EFH37919.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8796] Length = 322 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 12 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 71 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 72 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 131 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 132 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDK 191 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 192 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 249 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA + + Sbjct: 250 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLIS 299 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 300 ELPDGHPKSLLLSLT 314 >gi|15924460|ref|NP_371994.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus Mu50] gi|15927051|ref|NP_374584.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus N315] gi|57650425|ref|YP_186354.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus COL] gi|148267954|ref|YP_001246897.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150394018|ref|YP_001316693.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156979789|ref|YP_001442048.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus Mu3] gi|161509637|ref|YP_001575296.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140963|ref|ZP_03565456.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315977|ref|ZP_04839190.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006256|ref|ZP_05144857.2| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795475|ref|ZP_05644454.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9781] gi|258413283|ref|ZP_05681559.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9763] gi|258420610|ref|ZP_05683552.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9719] gi|258426805|ref|ZP_05688025.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9299] gi|258444803|ref|ZP_05693132.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A8115] gi|258447363|ref|ZP_05695507.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A6300] gi|258449752|ref|ZP_05697853.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A6224] gi|258451128|ref|ZP_05699163.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A5948] gi|258454578|ref|ZP_05702542.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A5937] gi|282892966|ref|ZP_06301201.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus A8117] gi|282921716|ref|ZP_06329433.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9765] gi|282927997|ref|ZP_06335606.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A10102] gi|284024468|ref|ZP_06378866.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 132] gi|296275333|ref|ZP_06857840.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MR1] gi|13701269|dbj|BAB42563.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus N315] gi|14247241|dbj|BAB57632.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus Mu50] gi|57284611|gb|AAW36705.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus COL] gi|147741023|gb|ABQ49321.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149946470|gb|ABR52406.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156721924|dbj|BAF78341.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus Mu3] gi|160368446|gb|ABX29417.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257789447|gb|EEV27787.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9781] gi|257839847|gb|EEV64315.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9763] gi|257843558|gb|EEV67965.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9719] gi|257849966|gb|EEV73924.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9299] gi|257850296|gb|EEV74249.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A8115] gi|257853554|gb|EEV76513.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A6300] gi|257857000|gb|EEV79900.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A6224] gi|257861183|gb|EEV83996.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A5948] gi|257862961|gb|EEV85725.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A5937] gi|269940961|emb|CBI49345.1| putative heptaprenyl diphosphate synthasecomponent II [Staphylococcus aureus subsp. aureus TW20] gi|282590294|gb|EFB95374.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A10102] gi|282593978|gb|EFB98967.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9765] gi|282764963|gb|EFC05088.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus A8117] gi|285817150|gb|ADC37637.1| Heptaprenyl diphosphate synthase component II [Staphylococcus aureus 04-02981] gi|312829860|emb|CBX34702.1| heptaprenyl diphosphate synthase component 2 (HEPPPsynthase subunit 2) (Spore germination protein C3) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129185|gb|EFT85180.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus CGS03] gi|315197784|gb|EFU28118.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus CGS01] gi|329314146|gb|AEB88559.1| Heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus T0131] gi|329723204|gb|EGG59735.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 21189] gi|329727672|gb|EGG64128.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 21172] Length = 319 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 9 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 68 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 69 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 128 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 129 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDK 188 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 189 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 246 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA + + Sbjct: 247 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLIS 296 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 297 ELPDGHPKSLLLSLT 311 >gi|227537499|ref|ZP_03967548.1| possible geranyltranstransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227242636|gb|EEI92651.1| possible geranyltranstransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 325 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 122/212 (57%), Gaps = 4/212 (1%) Query: 32 DVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 D ++Y++ GK++RP+LTL A L E + V A AIE+ H +L+HDD++D + L Sbjct: 29 DPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAALAIEYFHNFSLIHDDIMDKAPL 88 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL---VACTLAEGELRQ 147 RRG++ W + ++L GD LL +A+ V + + L+ L+ VA + EG+ Sbjct: 89 RRGQLTVHEKWNDSVAILSGDGLLVKAYEQVAKCPKENLLDLLTTFNKVATEVCEGQQLD 148 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + VTE++YLH+I+ KT+VL AL + ++IA ++ + +G+N+GIAFQL Sbjct: 149 MDFESLDQVTEDEYLHMIRLKTSVLLGGALRMGAIIAQASLEQQEFIYDFGVNVGIAFQL 208 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 DD+LD G+ GK +G D K T +I Sbjct: 209 QDDILDVYGDPETFGKQVGGDIIANKKTFLLI 240 >gi|227505153|ref|ZP_03935202.1| possible trans-hexaprenyltranstransferase [Corynebacterium striatum ATCC 6940] gi|227198266|gb|EEI78314.1| possible trans-hexaprenyltranstransferase [Corynebacterium striatum ATCC 6940] Length = 334 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/312 (29%), Positives = 157/312 (50%), Gaps = 10/312 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEF 73 V L+ I + + + V +L +GGKR RPM+ L + G V+ A +E Sbjct: 29 VEELLHHEIDRGQDFVKEKVSHLSSAGGKRFRPMMALLASEFGARPGSPEVVKAATVVEM 88 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A ++ + + +E Sbjct: 89 VHVATLYHDDVMDEAERRRGVESANFRWTNSVAILAGDVLLAHASRLMSQLDTH-TVEHF 147 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 S L G++R+ + + E Y+ VI+ KTAVL ++A + + AG A Sbjct: 148 SETFEELVTGQMRETIGAGEANAVEH-YMAVIREKTAVLIASAGYLGAYHAGATPEQAAA 206 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF-QRGTKRE--K 250 L+ G +G+ FQ+VDD++D + E GK G D R G TLPV+ A + GT + + Sbjct: 207 LRQIGGAIGMIFQIVDDIIDIFSDSKESGKTPGTDLREGVFTLPVLYALEEEGTVGDELR 266 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + D SVE +A ++R++ + Y + ++ L LP+ + ++L Sbjct: 267 GLLTGPLGD-DASVE---RAIELLRQSGGREKAMNDVHGYLRVVEEQLSVLPECAASEAL 322 Query: 311 MEVVDFCLQRLN 322 ++ D+ ++R+ Sbjct: 323 RQLADYTVRRVG 334 >gi|253733283|ref|ZP_04867448.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus TCH130] gi|304380947|ref|ZP_07363606.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|253728823|gb|EES97552.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus TCH130] gi|304340533|gb|EFM06468.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320140359|gb|EFW32215.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MRSA131] gi|320142714|gb|EFW34517.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MRSA177] Length = 332 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 22 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 81 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 82 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 141 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 142 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDK 201 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 202 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 259 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA + + Sbjct: 260 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLIS 309 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 310 ELPDGHPKSLLLSLT 324 >gi|87160661|ref|YP_494056.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195203|ref|YP_500004.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus NCTC 8325] gi|269203095|ref|YP_003282364.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus ED98] gi|87126635|gb|ABD21149.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202761|gb|ABD30571.1| heptaprenyl diphosphate syntase component II, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|262075385|gb|ACY11358.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus ED98] gi|302751300|gb|ADL65477.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 314 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 4 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 63 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 64 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 123 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 124 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDK 183 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 184 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 241 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA + + Sbjct: 242 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLIS 291 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 292 ELPDGHPKSLLLSLT 306 >gi|332884305|gb|EGK04573.1| hypothetical protein HMPREF9456_00900 [Dysgonomonas mossii DSM 22836] Length = 325 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 120/212 (56%), Gaps = 3/212 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y++ GGKR+RP L+L + + + + + +A IE H TLLHDD++D + +RRG Sbjct: 34 ISYILSLGGKRVRPALSLMSYNLYKEDVERVIPIALGIEIFHNFTLLHDDLMDRADMRRG 93 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLSL 150 + W + T+VL GD +L +A+ + + SQ L L + T E G+ + Sbjct: 94 NPTVHIKWNDNTAVLSGDAMLIEAYKEIAKIDSQYLKPVLDLFSTTATEICCGQQYDMEF 153 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + +DVT +YL +I+ KTAVL + +L+ +++AG + L +YG+++G+ FQL+DD Sbjct: 154 EQRMDVTIAEYLEMIRLKTAVLLACSLKEGAIVAGASAEDAENLYNYGIHVGLGFQLMDD 213 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +LD G+ + GK IG D K T I A Sbjct: 214 LLDVYGDSSNFGKKIGGDILCNKKTFLFINAL 245 >gi|242309903|ref|ZP_04809058.1| polyprenyl synthetase [Helicobacter pullorum MIT 98-5489] gi|239523200|gb|EEQ63066.1| polyprenyl synthetase [Helicobacter pullorum MIT 98-5489] Length = 306 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 10/206 (4%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK LR L AL + + +LL IE I +A+LLHDDV+D++ +RR K + + Sbjct: 33 GKMLRSKL----ALNIATESEECILLCAIIEMIQSASLLHDDVIDNATMRRSKPSINAIA 88 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC----TLAEGELRQLSLSKNLDVT 157 G++ ++++GD L S+AFC + T+ QE + + TLA GE+ + L+K + Sbjct: 89 GDKNAIMLGDILYSKAFCEL--TQFQENFPMIPRIVANAVTTLAIGEMEDVELAKQFNAN 146 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E YL +++ KTA L + ++ ++G ++ + YG NLGIAFQ++DDVLD Sbjct: 147 EAKYLTMVEHKTASLIESTAYAAAFLSGRNQEEAKSFRIYGRNLGIAFQIIDDVLDIVSS 206 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQ 243 +GK DF+ GK TLP I + Sbjct: 207 TQTLGKPALSDFKEGKTTLPYIYLYH 232 >gi|254430804|ref|ZP_05044507.1| solanesyl diphosphate synthase [Cyanobium sp. PCC 7001] gi|197625257|gb|EDY37816.1| solanesyl diphosphate synthase [Cyanobium sp. PCC 7001] Length = 323 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/292 (31%), Positives = 148/292 (50%), Gaps = 8/292 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L +GGKRLRP + L + + G+ H LA E IHTA+L+HDDVVD++A Sbjct: 36 AAEHLFAAGGKRLRPGIVLLLSRAVAPDGELTPRHRRLAEITEMIHTASLVHDDVVDEAA 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG + ++ +VL GDFL +QA + + ++ LS V LA+GE++Q Sbjct: 96 TRRGVDTVHSRFNHRVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E YL KTA L + + + +++G+ L +G LG+AFQ+VD Sbjct: 156 FRYDTTQSFETYLEKSYCKTASLIANSARAAGVLSGLPAPRLDDLYRFGRQLGLAFQVVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G ++GK D +G T P + A Q E+ I +L++ Sbjct: 216 DILDFTGSDQQLGKPAASDLASGYLTAPALYALQ-----ERPALAGLIEREFSEEGDLEQ 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++R A+ + A + ++A ++L L S + +L + DF L RL Sbjct: 271 ALELVRGCDAIPRSRALAEQFTREAAEALEWLQPSEPRSALRALPDFVLSRL 322 >gi|282919182|ref|ZP_06326917.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus C427] gi|282316992|gb|EFB47366.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus C427] Length = 319 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 9 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 68 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 69 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 128 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 129 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 188 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 189 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 246 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA + + Sbjct: 247 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKEVSSKYLSKALNLIS 296 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 297 ELPDGHPKSLLLSLT 311 >gi|228474123|ref|ZP_04058864.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624] gi|228274637|gb|EEK13478.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624] Length = 323 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 121/229 (52%), Gaps = 4/229 (1%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D + + D + Y++ GGKRLRP LT+ +A + + A A+E H +L+HDD++ Sbjct: 23 DPKNLYDPIHYILNVGGKRLRPTLTMLSADIFGTDYHKALYAALAVEIFHNFSLVHDDIM 82 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAE 142 D + LRRG W T +L GD +L A+ + + QE + S A + E Sbjct: 83 DAAPLRRGHPTVHTKWNLNTGILSGDTMLILAYQYFEQYEPNIFQELAKIFSKTAIEVCE 142 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+ + + V+ + YL +I KTAVL AAL++ ++IA +Q + +G+ LG Sbjct: 143 GQQYDVDFEQQAQVSTDQYLKMIAYKTAVLVGAALQMGAIIAQTTEENKQKIYDFGLALG 202 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 IA+QL DD LD G+ + GK IG D K TL + A ++GT +K Sbjct: 203 IAYQLQDDYLDTFGDAS-FGKKIGGDILQNKKTLLYLKALEKGTPEQKQ 250 >gi|258647197|ref|ZP_05734666.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC 51259] gi|260853026|gb|EEX72895.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC 51259] Length = 321 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 122/222 (54%), Gaps = 3/222 (1%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + + Y + GGKR+RP LTL + + + A ++E H TLLHDD++D + LR Sbjct: 26 EPIAYALSGGGKRVRPHLTLLACSLYSDDPEKAIPAALSVETYHNHTLLHDDLMDGADLR 85 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQL 148 RG+ W T++L GD +L AF ++E A E L L+A T + EG+ + Sbjct: 86 RGRPTVFRKWDANTAILSGDTMLILAFNHLLEGGYPNAAELLQLLARTAREVCEGQQYDM 145 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + + DVTE +Y+ +I+ KT+VL + AL++ +L+AG L +G +G+AFQL Sbjct: 146 NFEQRNDVTEAEYIEMIRLKTSVLLACALKMGALVAGAPADQADLLYHFGEQIGLAFQLQ 205 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 DD LD G+ GK IG D + K T +I A + ++++ Sbjct: 206 DDYLDCYGDPAVFGKQIGGDIASAKKTYLLINALESADEKQR 247 >gi|291514908|emb|CBK64118.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301] Length = 329 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/319 (27%), Positives = 161/319 (50%), Gaps = 14/319 (4%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-----LEYRGDNHV 65 ++E ++ + ++ ++ E++ D+++Y + + GK +RPML + +A M G Sbjct: 14 ELEALDEFVDRQFTAEGELLSDMLRYALSARGKGIRPMLVMLSAAMNAPVKGAAAGRRAC 73 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 L A +E IH A+L+HDDV+D++ +RRGK +A W + +V++GD++L++ + +++ Sbjct: 74 LAAMLVEMIHVASLIHDDVIDEADMRRGKPSANARWQSHKAVILGDYILAKNMNIGLQSG 133 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + + + L EGE+ Q + N +T + YL +I KTA L + +L G Sbjct: 134 QFDLVTHVCGSMAALCEGEVLQDECAANSTMTRQAYLDIIYKKTASLLGVSASAGALAVG 193 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 ++ +G +G+AFQ+ DD+LDY + GK D R GK TLP++ R Sbjct: 194 ATRDRVATMRRFGEAVGMAFQIQDDILDYTPTAH-TGKPANNDLREGKITLPLLSVLDRA 252 Query: 246 T---KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY-SYGQKAKDSLRCL 301 + +RE S ++ VE L+ EN + Y +A + L Sbjct: 253 SDSRRRELLERLSRCHESDEEVEYLRSTV----ENEGGLSFAAEVMQGYIARAVEMLSDY 308 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS ++ +L+ + + +R Sbjct: 309 PDSEYRSALVNLCAYIAER 327 >gi|49483657|ref|YP_040881.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MRSA252] gi|257425534|ref|ZP_05601959.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 55/2053] gi|257428193|ref|ZP_05604591.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 65-1322] gi|257430823|ref|ZP_05607205.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 68-397] gi|257433581|ref|ZP_05609939.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus E1410] gi|257436423|ref|ZP_05612470.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus M876] gi|282904051|ref|ZP_06311939.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus C160] gi|282905816|ref|ZP_06313671.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908786|ref|ZP_06316604.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911047|ref|ZP_06318849.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus WBG10049] gi|282914259|ref|ZP_06322046.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus M899] gi|282924366|ref|ZP_06332040.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus C101] gi|283958233|ref|ZP_06375684.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus A017934/97] gi|293501285|ref|ZP_06667136.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus 58-424] gi|293510246|ref|ZP_06668954.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus M809] gi|293526841|ref|ZP_06671525.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus M1015] gi|49241786|emb|CAG40477.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MRSA252] gi|257271991|gb|EEV04129.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 55/2053] gi|257275034|gb|EEV06521.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 65-1322] gi|257278951|gb|EEV09570.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 68-397] gi|257281674|gb|EEV11811.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus E1410] gi|257284705|gb|EEV14825.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus M876] gi|282313753|gb|EFB44146.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus C101] gi|282322327|gb|EFB52651.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus M899] gi|282324742|gb|EFB55052.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus WBG10049] gi|282327050|gb|EFB57345.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331108|gb|EFB60622.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595669|gb|EFC00633.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus C160] gi|283790382|gb|EFC29199.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus A017934/97] gi|290920399|gb|EFD97463.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus M1015] gi|291096290|gb|EFE26551.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus 58-424] gi|291467190|gb|EFF09708.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus M809] Length = 319 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 9 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 68 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 69 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 128 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 129 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 188 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 189 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 246 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA + + Sbjct: 247 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKEVSSKYLSKALNLIS 296 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 297 ELPDGHPKSLLLSLT 311 >gi|299141403|ref|ZP_07034540.1| polyprenyl synthetase [Prevotella oris C735] gi|298577363|gb|EFI49232.1| polyprenyl synthetase [Prevotella oris C735] Length = 323 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 123/226 (54%), Gaps = 6/226 (2%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 VKY++ GGKR+RP+L L + + + ++ ++ ACA+E H TLLHDD++D++ +RRG Sbjct: 30 VKYVLSMGGKRIRPVLMLLSYGLFKDDVESVLMPACALETYHNYTLLHDDLMDNADMRRG 89 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQLSL 150 W T++L GD +L A+ + + + L + A + EG+ + Sbjct: 90 HETVHRKWDANTAILSGDSMLVLAYERMAKCNPVYLSDVLHTFTETALEIGEGQQYDMEF 149 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DVTE++Y+ +I+ KT+VL + A ++ +++AG + L +G +G+AFQL DD Sbjct: 150 ETRNDVTEDEYIEMIRLKTSVLLACAQKIGAILAGASKQDQDNLYKFGEQIGLAFQLQDD 209 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG---TKREKNFW 253 LD G+ GK +G D K T +I A+ R +RE W Sbjct: 210 YLDVYGDPKVFGKKLGGDIICNKKTYMLINAYNRADAEQRRELQHW 255 >gi|297591052|ref|ZP_06949690.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus MN8] gi|297575938|gb|EFH94654.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus MN8] Length = 332 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 22 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 81 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 82 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 141 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 142 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 201 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 202 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 259 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA + + Sbjct: 260 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKEVSSKYLSKALNLIS 309 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 310 ELPDGHPKSLLLSLT 324 >gi|171184649|ref|YP_001793568.1| polyprenyl synthetase [Thermoproteus neutrophilus V24Sta] gi|170933861|gb|ACB39122.1| Polyprenyl synthetase [Thermoproteus neutrophilus V24Sta] Length = 334 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 93/318 (29%), Positives = 168/318 (52%), Gaps = 21/318 (6%) Query: 20 LKRICSDVEMIPDV---VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 L+R S +++ PD V Y + +GGKRLRP+LTLATA + R + V A +E IH Sbjct: 19 LERYLS-IDLAPDFREEVLYQVKTGGKRLRPLLTLATAEAVSGRWEPAVPAAAIVELIHN 77 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSL 135 +L++DD++D +RRG R +G+ ++L+G + V++T A + ++ Sbjct: 78 YSLIYDDIIDRGDVRRGLPTVRKAFGDNAAILIGIWYREAIEEAVLDTPKPLAFAKEVAK 137 Query: 136 VACTLAEGELRQLSL------------SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 V + EGE + ++ +VT EDY+H++ KT L +AA + ++ Sbjct: 138 VIKAIDEGERLDILFEYAGREDPYFIKARKAEVTLEDYIHMVSLKTGALIAAAAKWGAMS 197 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI-LAF 242 + + ++G+ G+AFQ++DDVLD G+ + GK IG+D + K V+ +A Sbjct: 198 VSDDGKLAEEAWNFGLKAGVAFQIIDDVLDIYGDPKKFGKEIGKDIKEHKRGNAVVAIAL 257 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 R +E+ S ++ +I+ E +K+A +M +A + A Y ++A+ L +P Sbjct: 258 TRLQPQERRRLLSILSKAEIAEEEVKEAVALMDSVKAREEALALAERYRREAEQHLAEIP 317 Query: 303 DSSWKKSLMEVVDFCLQR 320 ++ ++L E++ F L+R Sbjct: 318 NN---EALRELLAFILER 332 >gi|295427978|ref|ZP_06820610.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus EMRSA16] gi|295128336|gb|EFG57970.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus EMRSA16] Length = 322 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 12 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 71 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 72 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 131 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 132 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 191 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 192 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 249 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA + + Sbjct: 250 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKEVSSKYLSKALNLIS 299 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 300 ELPDGHPKSLLLSLT 314 >gi|320095563|ref|ZP_08027226.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977471|gb|EFW09151.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 178 str. F0338] Length = 337 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/331 (30%), Positives = 155/331 (46%), Gaps = 20/331 (6%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--- 60 LE +E V + + S +++ ++ +L +GGKRLRP+LTL A + Sbjct: 13 LESRISPGLEAVERQLAGAVSSSRDLVDELTAHLSAAGGKRLRPLLTLVCAQLGRPELAL 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ + A A+E H A+L HDDV+D + RRG +A+ +WGN ++L GD L ++A + Sbjct: 73 GERVITGATAVELTHLASLYHDDVMDSAPTRRGVPSAQRLWGNNRAILAGDVLFARASAL 132 Query: 121 VIE------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 V T+ E L CT G+L + + E YL V+ KT L S Sbjct: 133 VAALGPEMVTRHAVTFERL----CT---GQLNETFGPAPGEDPVEFYLRVLADKTGSLVS 185 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 +A +L++ V + +G +G+AFQ+ DDVLD + GK G D R G Sbjct: 186 SAAAFGALLSDAGAFVGDVVAEFGERVGVAFQIADDVLDLASSGGQSGKTPGTDLREGVD 245 Query: 235 TLPVILAFQRGTKREKNFWKSTINDG----KISVENLKKAFIIMRENRALVDTEYRAYSY 290 TLPV+L +R + + I +G S E L ++R + L +T A ++ Sbjct: 246 TLPVLLLRRREAEGGLDDAGRRILEGLGSDLSSDEALGDVVSMLRVHDVLDETRSLARAW 305 Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A D L LP K +L+ + RL Sbjct: 306 AAGAIDCLEALPKGEPKTALVAFAHLMVDRL 336 >gi|148925911|ref|ZP_01809598.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8486] gi|145844897|gb|EDK22001.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8486] Length = 297 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/279 (31%), Positives = 149/279 (53%), Gaps = 17/279 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GK+LR L LA A + + AIE IH A+LLHDD++D+S LRRG + Sbjct: 29 SGKKLRSKLLLAIA----DESEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAE 84 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G + ++++GD L S+AF + + ++ +S LA GEL + L + ++ +E Sbjct: 85 FGTKNALMLGDILYSKAFYELSKMDAR-FTSIISDAVVKLAIGELMDVDLGEKFNINKEA 143 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 YL +I +KTAVL A+ +++AG+ + YG NLG+AFQ++DD+LD + + Sbjct: 144 YLKMIYNKTAVLIEASARCGAILAGL---YEKDFAEYGKNLGLAFQMIDDILDIKSDEKI 200 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVENLKKAFIIMRE 276 +GK DF+ GK TLP I ++ ++++ +K +N+ + E LK F E Sbjct: 201 LGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKKDLNENE--KEWLKTKF---EE 255 Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 +AL A +Y +KA+ ++ ++ + ++D Sbjct: 256 QKALEKAILEAKTYAKKARKAIEKYDNNKLNDIIKAMID 294 >gi|312438127|gb|ADQ77198.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus TCH60] Length = 332 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ E + +A Sbjct: 22 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVA 81 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 82 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 141 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 142 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 201 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 202 ETVRKLKMIGHYIGMSFQIIDDVLDFTSAEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 259 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA + + Sbjct: 260 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKEVSSKYLSKALNLIS 309 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 310 ELPDGHPKSLLLSLT 324 >gi|312899735|ref|ZP_07759057.1| polyprenyl synthetase [Enterococcus faecalis TX0470] gi|311293131|gb|EFQ71687.1| polyprenyl synthetase [Enterococcus faecalis TX0470] Length = 300 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 154/299 (51%), Gaps = 19/299 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLL 80 D + I V +I SGGK LRP A L+ Y G+ LA +IE +HTATL+ Sbjct: 8 DNQEIQAAVHDMIHSGGKLLRP----AYQLLFSYFGEQRDPKKATALAASIELLHTATLV 63 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDD+VD++ RRG R +GN T+V GD+L F ++ + S +L+++ L + ++ Sbjct: 64 HDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSS--SLKSIQLNSRSM 121 Query: 141 AE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + GEL Q+ N +VT + YL I KTA LF+ + V + +G + Sbjct: 122 EKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G N+G+AFQ++DD+LDY + +GK + ED R G +LP+I A + RE + Sbjct: 182 GENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGVYSLPLIYALE--ANREV-LLPLLM 238 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVV 314 ++ E ++ + ++ E + + A Y +KA + LP++ K+ L E+ Sbjct: 239 KKEALTDEETQEIYRLVHELGGVEKAQELATHYTEKALKEISKLPETKAQAKEQLYEIT 297 >gi|224025695|ref|ZP_03644061.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM 18228] gi|224018931|gb|EEF76929.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM 18228] Length = 327 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/249 (34%), Positives = 131/249 (52%), Gaps = 19/249 (7%) Query: 19 ILKRICSDVEMIP---------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-- 67 ++KRI + +E + D ++Y++ GGKRLRP+L L + YR D + Sbjct: 9 LMKRIHAYIEQLSYSREPKGLYDPIEYVLALGGKRLRPVLMLLAYNL--YREDVESIFSQ 66 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCM--VIE 123 A IE H TLLHDD++D++ +RRGK W T++L GD +LS F M Sbjct: 67 AAGIETYHNFTLLHDDLMDNADMRRGKPVVHKKWNENTAILSGDAMLILSYQFMMNQCPP 126 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 QE +E A + EG+ + DVT +Y+ +I+ KT+VL +AAL++ +++ Sbjct: 127 EHVQEVMEIFGRTALEVCEGQQWDMEFESRNDVTVGEYIEMIRLKTSVLLAAALKIGAVL 186 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G ++ Q L +G+ +G+AFQL DD LD G GK IG D K T +I A + Sbjct: 187 GGASSADAQKLYDFGIRMGLAFQLQDDYLDVYGNPAVFGKKIGGDILCNKKTYMLITALE 246 Query: 244 --RGTKREK 250 +G RE+ Sbjct: 247 QAKGENREE 255 >gi|205355397|ref|ZP_03222168.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346631|gb|EDZ33263.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8421] Length = 275 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 143/262 (54%), Gaps = 17/262 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GK+LR L LA A E + AIE IH A+LLHDD++D+S LRRG + Sbjct: 7 SGKKLRSKLLLAIADESEI----AFKICAAIELIHLASLLHDDIIDESELRRGARSVNAE 62 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G + ++++GD L S+AF + + ++ +S LA GEL + L + ++ +E Sbjct: 63 FGTKNALMLGDILYSKAFYELSKMDAR-FTSIISDAVVKLAIGELMDVDLGEKFNINKEA 121 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 YL +I +KTAVL A+ +++AG+ + YG NLG+AFQ++DD+LD + + Sbjct: 122 YLKMIYNKTAVLIEASARCGAILAGL---YEKDFAEYGKNLGLAFQMIDDILDIKSDEKI 178 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVENLKKAFIIMRE 276 +GK DF+ GK TLP I ++ ++++ +K +N+ + E LK F E Sbjct: 179 LGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKKDLNENE--KEWLKTKF---EE 233 Query: 277 NRALVDTEYRAYSYGQKAKDSL 298 +AL A +Y +KA+ ++ Sbjct: 234 QKALEKAILEAKTYAKKARKAI 255 >gi|242011677|ref|XP_002426574.1| Decaprenyl-diphosphate synthase subunit, putative [Pediculus humanus corporis] gi|212510711|gb|EEB13836.1| Decaprenyl-diphosphate synthase subunit, putative [Pediculus humanus corporis] Length = 262 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 78/255 (30%), Positives = 131/255 (51%), Gaps = 5/255 (1%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A E IH+A+L+HDDV+D S RRGK + ++W ++ + GDF+L+ A M+ + Sbjct: 12 VAMIAEMIHSASLIHDDVIDQSDFRRGKPSVNVLWNHKKVTMAGDFILAVASMMIARLRD 71 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + LS V L +GE QL + + YL KTA L + + + +++AG Sbjct: 72 DKVTLTLSQVVTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANSAKAVAMLAGA 131 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 S+ + YG N+G+AFQLVDD+LD+ + MGK D + G T PV+ A ++ Sbjct: 132 DESLSEVAFQYGRNIGLAFQLVDDLLDFVSSADAMGKPTAADLKLGLATAPVLFACEKYP 191 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + G + KAF ++ +++ L T + A + +A + +S + Sbjct: 192 ELNAMIMRRFQEPGDVD-----KAFELVHKSQGLEQTRFLAKKHCMEAVRLANTIVESPY 246 Query: 307 KKSLMEVVDFCLQRL 321 +K L+ V DF L R+ Sbjct: 247 QKGLIVVSDFVLNRM 261 >gi|47221152|emb|CAG05473.1| unnamed protein product [Tetraodon nigroviridis] Length = 418 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 101/334 (30%), Positives = 159/334 (47%), Gaps = 20/334 (5%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV--------EMIPDVVKYLIFSGGKRLRPMLT--L 51 KM D+ LKD + LK + D+ E + + Y GK +RPM+ + Sbjct: 88 KMHSDVKLKDPFMLAQKDLKSLYEDIRKELFVSKEELKFLCDYYFDGKGKAIRPMIVVLM 147 Query: 52 ATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106 A AL + +L +A E IHTA+L+HDDV+D S RRGK +WG + + Sbjct: 148 ARALNIHSNRSGDLLPGQRAIAMISEMIHTASLVHDDVIDGSDQRRGKTTINEIWGERKA 207 Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166 +L GDF+LS A + + ++ LS V L GE QL +N + YL Sbjct: 208 ILAGDFILSAASMALARIGNITVVKVLSQVIEDLVRGEFMQLGSKENEKERFKHYLEKTF 267 Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KTA L + + + S++ V + YG N+GIAFQLVDDVLD+ N++GK Sbjct: 268 KKTASLIANSCKAVSILVNSDPEVHEIAFQYGKNVGIAFQLVDDVLDFTSGANQLGKPSA 327 Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286 D + G T PV+ A Q+ + + + G ++ +A+ + ++ + T Y Sbjct: 328 ADLKLGLATGPVLFACQQFPELHAMIMRRFSSKG-----DVDRAWQYVLQSDGVEQTNYL 382 Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A Y Q+A + L S+ + +L+ + + L R Sbjct: 383 ARRYCQEAIRQISLLRPSAERDALIRLTEMVLTR 416 >gi|90994460|ref|YP_536950.1| prenyl transferase [Porphyra yezoensis] gi|122194707|sp|Q1XDL8|PREA_PORYE RecName: Full=Prenyl transferase gi|90819024|dbj|BAE92393.1| prenyl transferase [Porphyra yezoensis] Length = 323 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/295 (29%), Positives = 147/295 (49%), Gaps = 16/295 (5%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALR 91 K+L +GGKR+RP L A + D LA E IHTA+L+HDD++D+ R Sbjct: 38 KHLFDAGGKRVRPALVFLVAKATSEKQDINTGQKRLAEITEIIHTASLVHDDIIDECTTR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG ++ + +VL GDFL +Q+ + ++ ++A+S V AEGE+RQ + Sbjct: 98 RGVKTVHNLFNTKIAVLAGDFLFAQSSWYLANIENLAVVKAISKVITDFAEGEIRQGLVH 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + ++ + Y+ KTA L +A+ ++++ G + + L YG ++G+AFQ++DDV Sbjct: 158 FDPSISIDAYIEKSFYKTASLIAASCRGAAMLNGSNHQINNDLYLYGKHMGLAFQIMDDV 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR----EKNFWKSTINDGKISVENL 267 LD G +GK G D NG T P++ + + ++ F ST ++ Sbjct: 218 LDITGSTKSLGKPAGADLINGNLTSPLLFSLTQEASLNDLIDREFCNST---------DI 268 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +++ + + + A Q A L+ LP S+ SL E+ F + RL+ Sbjct: 269 ASTLFLIKRSGGITKAKDLAKEQVQAALSCLQFLPQSTPVSSLKELTHFIITRLS 323 >gi|51209963|ref|YP_063627.1| prenyl transferase [Gracilaria tenuistipitata var. liui] gi|50657717|gb|AAT79702.1| prenyl transferase [Gracilaria tenuistipitata var. liui] Length = 323 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 152/290 (52%), Gaps = 8/290 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLE---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L +GGKR+RP + L AL + H LA E IHTA+L+HDDV+D+ +R Sbjct: 38 EHLFKAGGKRIRPTIILLVALSTTQALHILPEHKRLAEITEIIHTASLVHDDVIDECEIR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG + + +VL GDFL +Q+ + + E ++ +S V AEGE+RQ Sbjct: 98 RGVNTVHNAFSTKVAVLAGDFLFAQSSWYLANLNNLEVVKTISKVITDFAEGEIRQGLTC 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + ++ +Y+ KTA L +++ + +++++ + + YG +LG+AFQ+VDD+ Sbjct: 158 FDETISMNNYIEKSFYKTASLIASSCKAAAILSDTTTNTQNQFYLYGKHLGLAFQIVDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LD G +GK G D +NG T P++ A + ++ K + ++ +++ KA Sbjct: 218 LDIVGSTVSLGKPAGSDLKNGNLTAPLLFALEENSELYKLIAREFQHN-----KDIDKAI 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 I++ + + A + Q + +L+ + + +K+L + ++ + RL Sbjct: 273 EIIKSTNGIQKSYDLAQEHMQASVQALKKIDNQVAQKNLTYINNYVMNRL 322 >gi|255011168|ref|ZP_05283294.1| putative isoprenoid biosynthesis related protein [Bacteroides fragilis 3_1_12] Length = 276 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 6/192 (3%) Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A AIE H TLLHDD++D + +RRGK VW + T++L GD ++ A+ + S+ Sbjct: 17 ATAIEVYHNYTLLHDDLMDRADMRRGKTTVHKVWNDNTAILSGDAMMVLAYQYMASCSSE 76 Query: 128 ---EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 E ++ SL A + EG+ + DV EE+YL +I+ KTAVL +A+L++ +++ Sbjct: 77 YLKEVMDLFSLTALEICEGQQMDMGFESRDDVKEEEYLEMIRLKTAVLLAASLKIGAILG 136 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G + L +GM +G+AFQL DD+LD G+ GKNIG D K T +I A +R Sbjct: 137 GASREDAENLYDFGMQIGVAFQLQDDLLDVYGDSAVFGKNIGGDILCNKKTYMLIKALER 196 Query: 245 GTKR---EKNFW 253 + E N W Sbjct: 197 ADRNQLDELNRW 208 >gi|94984603|ref|YP_603967.1| dimethylallyltransferase [Deinococcus geothermalis DSM 11300] gi|94554884|gb|ABF44798.1| Dimethylallyltransferase [Deinococcus geothermalis DSM 11300] Length = 575 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 13/306 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATL 79 S VE I + + L+ +GGKR RP +T A L G + LA IE +H+A+L Sbjct: 275 SRVEFIELIGEDLVAAGGKRARPTVTFLAAQALGLDGQDPRWQTVTDLAVCIELLHSASL 334 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVAC 138 LHDD++DD+ RRG+ AA +GN SV+ GDF+L++ ++ AL A A Sbjct: 335 LHDDLIDDADTRRGQQAAFRRFGNVVSVMSGDFMLARLLTLLAAMPQGPALTRAFGQTAS 394 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + EGE+ Q ++ + YL +I KTA L A +L+ + R AL ++G Sbjct: 395 QICEGEVLQFQVAAYAEYGLAPYLDIIHGKTAALIELAAFSPALLLNAPEAQRAALATFG 454 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV--ILAFQRGTKREKNFWKST 256 G+AFQ+ DD+LD G+ +GK +G D R GK TLPV +L + + + Sbjct: 455 REYGLAFQIQDDLLDLMGDEAILGKPVGGDLREGKATLPVLHLLDGPQHAEVRAVLERRA 514 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 N G VE +++ + R A+ T ++A ++L LP S + +L + Sbjct: 515 ANPG--DVERIRE---LARTQGAVERTREEIGRRARRALEALELLPPSEARAALAALPQR 569 Query: 317 CLQRLN 322 L+R + Sbjct: 570 ELERTH 575 >gi|254173799|ref|ZP_04880471.1| hypothetical protein TAM4_2178 [Thermococcus sp. AM4] gi|214032491|gb|EEB73321.1| hypothetical protein TAM4_2178 [Thermococcus sp. AM4] Length = 306 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 84/233 (36%), Positives = 131/233 (56%), Gaps = 6/233 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 ME ++ +++ + VE+ + +Y+I SGGKR+RP +TLA A L + + LA AI Sbjct: 1 MESLDERLVEALEGSVELAKKIGEYIIRSGGKRIRPRITLAVAKGLGLEEKDALDLASAI 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTA+L+HDDV+D + RR + WG + +VL GDFL +A +I K E ++ Sbjct: 61 ELIHTASLVHDDVIDLAEKRRNNPTVVMRWGPELAVLSGDFLFVRA-LRIIAGKKVEMVD 119 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 ++ V + + E+ Q ++ ++ + E Y +I KT LF A+ + + G + Sbjct: 120 YVAKVVEDMVKAEILQEAVRGSVHLDLETYYRIIDGKTGRLFGASFALPAYYHG--KTYW 177 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + L G +G AFQ+VDDVLDY GK+ +D NGK TLP+IL +R Sbjct: 178 EELDRAGTLVGRAFQIVDDVLDY---FPGTGKDRFKDLLNGKTTLPLILYTER 227 >gi|19704873|ref|NP_602368.1| heptaprenyl diphosphate synthase component II [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328953|ref|ZP_06871461.1| heptaprenyl diphosphate synthase component II [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19712760|gb|AAL93667.1| Heptaprenyl diphosphate synthase component II [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296153942|gb|EFG94752.1| heptaprenyl diphosphate synthase component II [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 326 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 3/211 (1%) Query: 42 GKRLRPMLTLATALM-LEYRGDNHVL--LACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GK LR L L A + ++ + + LA +E H A+L+HDD+VDDS RRGKV+ + Sbjct: 42 GKMLRSKLLLLCAFLGTNWKNNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQ 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +G +V GDFL+++ F EA+ LS + GE+ Q +++E Sbjct: 102 GKYGKDAAVFAGDFLIARIFYYGAVENLNEAVSILSKTVEYMCIGEIEQDLCRYQENISE 161 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + Y I+ KTA LF AA + + AG + Q L+ + NLG+ FQL DD+LD+ Sbjct: 162 KKYFENIERKTAALFQAASYIGAKEAGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNS 221 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 E+GK +DF+NG T PVI+A + RE Sbjct: 222 KELGKETHKDFQNGIYTFPVIMALKNPKARE 252 >gi|55377016|ref|YP_134866.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC 43049] gi|55229741|gb|AAV45160.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC 43049] Length = 346 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 102/319 (31%), Positives = 160/319 (50%), Gaps = 47/319 (14%) Query: 35 KYLIFSGGKRLRPMLTLATA--------LMLEYR-------GDNHVLLAC-AIEFIHTAT 78 +YL+ +GGKRLRP + L A L +YR G ++ A AIE I T T Sbjct: 40 RYLLDAGGKRLRPTVLLLVAESLLDVDPLTADYRDFPTLEGGQADMMSAALAIEVIQTFT 99 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEAL 133 L+HDD++DD ALRRG A + T++L GD L S+AF ++ET ++ +A + L Sbjct: 100 LIHDDIMDDDALRRGVPAVHKEYDLSTAILAGDTLYSKAFEFLLETGAAHERTVDANKRL 159 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + + EG+ + + VT E+YL +++ KTAVL+ AA + + + G A Sbjct: 160 ATTCTRICEGQSLDIEFEQRDVVTPEEYLEMVELKTAVLYGAAASIPATLLGADEQTVDA 219 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-------- 245 L +YG+++G AFQ+ DD+LD ++GK G D K TL + A Q+G Sbjct: 220 LYNYGLDVGRAFQIQDDLLDLTTPSEKLGKQRGSDLVENKQTLVTLHARQQGVDVGDLVD 279 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ----KAKDSLRCL 301 T + ++ I+D +VE L++ I EY A GQ K +L L Sbjct: 280 TDSVEAVSEAEIDD---AVERLREVGSI----------EY-ARQTGQDLIASGKQNLEVL 325 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PD+ + L + ++ ++R Sbjct: 326 PDNEARYLLEGIANYLVER 344 >gi|313618146|gb|EFR90238.1| heptaprenyl diphosphate synthase component II [Listeria innocua FSL S4-378] Length = 321 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 29/302 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVV 85 E D +L+ +GGKR+RPM +A L D + AIE IH A+++HDDVV Sbjct: 31 ETTSDAALHLLEAGGKRIRPMFVCLSA-RLSPDADFEAVKNAGVAIELIHMASIVHDDVV 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 DD+ LRRG+ + WGN ++ GDFL +++ + E K A + LS V L+ GE+ Sbjct: 90 DDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEI 149 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 QL N D + +YL IK KTA+L +A+ + +++G + + L +G +G+AF Sbjct: 150 EQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYKKLYRFGYYVGMAF 209 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN------- 258 Q+ DDVLD+ G E+GK GED G TLPV A E F K I+ Sbjct: 210 QITDDVLDFVGTEKELGKPAGEDLSQGNVTLPVFFAM------EDPFLKKRISQVTEDTQ 263 Query: 259 --DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK---DSLRCLPDSSWKKSLMEV 313 + + VE +KK+ E+ A +Y +KA DSL +P+ K ++ V Sbjct: 264 AEEIAVLVEEIKKSGAKKAEDVAT--------AYLKKAVATLDSLPQVPELKPLKQIVRV 315 Query: 314 VD 315 +D Sbjct: 316 LD 317 >gi|296395152|ref|YP_003660036.1| trans-hexaprenyltranstransferase [Segniliparus rotundus DSM 44985] gi|296182299|gb|ADG99205.1| Trans-hexaprenyltranstransferase [Segniliparus rotundus DSM 44985] Length = 352 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 99/324 (30%), Positives = 162/324 (50%), Gaps = 22/324 (6%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACA 70 +++V +I + S +E + V ++L+ +GGKR RP+ + A L + + A A Sbjct: 36 LDRVEDIIRAEVDSGIEAMSAVAEHLVKAGGKRFRPLFAVVAGKLGQPDQQGAVEVAAAA 95 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ATL HDDV+D++ +RRG AA + WGNQ ++L GD+L ++A ++ + S Sbjct: 96 LELIHLATLYHDDVMDEATMRRGVPAANVRWGNQVAILAGDYLFARACGLIAQLGS---- 151 Query: 131 EALSLVACTLAE---GELRQL---SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 EA ++VA T AE G+ R + + E YL I KTA L A ++ L Sbjct: 152 EATAIVAHTFAELVTGQFRDVVGAGADQGNAAKIEHYLATIHGKTASLIGACGRLAGLAV 211 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF-Q 243 V+ L S G+ G+AFQ+ DD++D + GK G D R G TLPV+ A + Sbjct: 212 RADQDVQDRLASIGVLTGMAFQIADDIIDIGSGSADSGKTPGTDLREGVMTLPVLYALEE 271 Query: 244 RGTKREKNFWKSTINDGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 G R K + G ++ E L +A ++ + A+ Y +A+ + LP Sbjct: 272 EGPSRLKEL----VGLGPLTDETLVAEALALLSASPAMDKARGVVQEYASRAEGEIAQLP 327 Query: 303 D-----SSWKKSLMEVVDFCLQRL 321 D ++++ VV ++R+ Sbjct: 328 DLGPQTDEVREAMRAVVRAAVERV 351 >gi|302898878|ref|XP_003047935.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256728867|gb|EEU42222.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 443 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 93/265 (35%), Positives = 136/265 (51%), Gaps = 20/265 (7%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + ++ Sbjct: 186 LAEITELIHTASLLHDDVIDHSISRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRN 245 Query: 127 QEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E L+ V L EGE QL + +N +EE YL KTA L S + Sbjct: 246 PEVVELLATVIANLVEGEFMQLKNTERDERNPKWSEETVSYYLQKTYLKTASLISKSCRA 305 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ A SYG NLG+AFQLVDD+LDY ++GK G D G T P++ Sbjct: 306 AALLGNSDPVTVDAAYSYGRNLGLAFQLVDDLLDYTQSGTDLGKPAGADLELGLATAPLL 365 Query: 240 LAFQR----GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 A+++ G + F K ++++A ++ ++ + T A Y KA Sbjct: 366 FAWKQMPELGALVGRKFEKEG---------DVERARELVLQSDGIEQTRALAQEYVDKAI 416 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320 S+ P+S K L+E+ L+R Sbjct: 417 ASIAEFPESEAKDGLIEMAHKSLKR 441 >gi|256027542|ref|ZP_05441376.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. D11] gi|289765501|ref|ZP_06524879.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. D11] gi|289717056|gb|EFD81068.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. D11] Length = 326 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 111/211 (52%), Gaps = 3/211 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GK R L L A + +N LA +E H A+L+HDD+VDDS RRGKV+ + Sbjct: 42 GKMFRSKLLLLCAFLGSNWKNNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQ 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +G +V GDFL+++ F EA+ LS + GE+ Q D++E Sbjct: 102 GKYGKDAAVFAGDFLMARIFYYGAVENLNEAVSILSKTVEYMCIGEIEQDLCRYQEDISE 161 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + Y I+ KTA LF AA + + +G + Q L+ + NLG+ FQL DD+LD+ Sbjct: 162 KKYFENIERKTAALFQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNS 221 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 E+GK +DF+NG T PVI+A + RE Sbjct: 222 KELGKETHKDFQNGIYTFPVIMALKNPKARE 252 >gi|220909327|ref|YP_002484638.1| polyprenyl synthetase [Cyanothece sp. PCC 7425] gi|219865938|gb|ACL46277.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425] Length = 989 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 97/310 (31%), Positives = 166/310 (53%), Gaps = 14/310 (4%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM----LEYRGDNHVLLACAIEFIH 75 L + +D ++ VV+ ++ GKR+R + +A + +N +A A+E +H Sbjct: 685 LDQTVADPALVQQVVRQILSLPGKRIRALCVYLSACVGRRSYPQAAEN---IALAVELVH 741 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEALS 134 A+LLHDDV+D + RR + ++ +V+GN S+L G+FL+ QA +++ T + A + L Sbjct: 742 AASLLHDDVIDLAPQRRHQPSSNMVYGNAASILGGNFLVVQAAQLLLNTGRPGLAADLLR 801 Query: 135 LV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 V A L+E E QL + + E YL++I+ KTA LF + + I+ +V +A Sbjct: 802 AVEAMILSESE--QLENRGQVILNPEQYLNIIRGKTATLFRWGCQAGASISNHPAAVVEA 859 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK--REKN 251 L YG NLG+AFQL+DD+LD GE +GK++ D +G T P ++A Q K E Sbjct: 860 LARYGENLGMAFQLIDDLLDVIGEGTLLGKDLYRDLADGVITYPFLVATQENPKICSELK 919 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 S + + LK ++M + +A+ +T A +Y ++A+ L +P + +L Sbjct: 920 MALSNPEHLQSASTQLKIKELVM-QTQAIAETRALAAAYIEQAQAELDRVPWGPARDTLN 978 Query: 312 EVVDFCLQRL 321 + + L+RL Sbjct: 979 ALAEVSLERL 988 >gi|284034155|ref|YP_003384086.1| trans-hexaprenyltranstransferase [Kribbella flavida DSM 17836] gi|283813448|gb|ADB35287.1| Trans-hexaprenyltranstransferase [Kribbella flavida DSM 17836] Length = 340 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 151/323 (46%), Gaps = 6/323 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYR 60 + LE +E+V + S+ + ++++ +GGKR RP+L L A Sbjct: 18 EALESRVRAGLERVEQALRDSTQSEAPFVTQAAQHVMVAGGKRFRPLLVLLAAEFGPRPT 77 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 V A +E H ATL HDDV+D++ALRRG A W N ++L GD+L ++A + Sbjct: 78 ATEVVDAAVVVELTHVATLHHDDVMDEAALRRGSSTANAAWDNSVAILAGDWLFAKASDL 137 Query: 121 VIETKSQEALEALSLVACTLAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 V + EA+ + L EG++R+ L + + D YL V+ KT L + + Sbjct: 138 VA-SLGPEAVRIQARTFGRLVEGQIRETLGVGEGQDPLAH-YLSVVADKTGSLIATSALF 195 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + AG V++AL+++G +G AFQL DD+LD E + GK G D R G PTLPV+ Sbjct: 196 GARFAGAPAEVQEALRAFGEEIGTAFQLADDILDVTSESGQSGKTPGTDLREGVPTLPVL 255 Query: 240 L--AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 + A K E ++ L + +R + +L E A+ Sbjct: 256 IFRAQADPAKPEDARLLELLDSDLTDDARLAETLAALRVHPSLQQAEEDVRRRADDARKL 315 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L LP+ + +L + D + R Sbjct: 316 LTDLPEGIARSALESLCDLVVTR 338 >gi|251781555|ref|YP_002995856.1| hypothetical protein SDEG_0124 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390183|dbj|BAH80642.1| hypothetical protein SDEG_0124 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126348|gb|ADX23645.1| polyprenyl synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 326 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 98/316 (31%), Positives = 155/316 (49%), Gaps = 25/316 (7%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFI 74 LI KR+ I V L +GGK LRP L + E D LL A ++E + Sbjct: 21 LIDKRVAVRNPAIETAVVDLSTAGGKYLRPAFFYLFSEFGQEESVDEDKLLKIATSLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 H ATL+HDD++DDS LRRG+ + +G +V GD L + F +++E+ + ++ Sbjct: 81 HMATLIHDDIIDDSPLRRGQETIQSQFGKDVAVYTGDLLFTVFFELILESMANTPY--MT 138 Query: 135 LVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + A T+ + GEL Q+ L N + T YLH I KTA LF A + + G + Sbjct: 139 INAKTMKKILMGELNQMHLQFNQEQTIRSYLHSISGKTAELFRLASKEGAYFGGADGKIV 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 G N+G+AFQ++DD+LDY + N K + ED G +LP++ Q +E Sbjct: 199 ALAGRIGFNIGMAFQILDDILDYTADQNTFNKPVLEDLTTGVYSLPLLFTLQ----KEPT 254 Query: 252 FWKSTINDGK---ISVENLKKAFII----MRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 +K ++ GK ++ L +I + +R L A + +KA ++ LP Sbjct: 255 SFKPLLDKGKAITLAERQLVSQKVIDLGGIEASRQL------ARRFTEKAIIDIKQLPKI 308 Query: 305 SWKKSLMEVVDFCLQR 320 +K L+++ D L+R Sbjct: 309 KAQKQLLQLTDHLLKR 324 >gi|298387038|ref|ZP_06996592.1| polyprenyl synthetase [Bacteroides sp. 1_1_14] gi|298260188|gb|EFI03058.1| polyprenyl synthetase [Bacteroides sp. 1_1_14] Length = 324 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 15/299 (5%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V+ ++ GK +RP+L L A + + A ++E +HTA+L+HDDVVD+S Sbjct: 32 LLDSVITHIRKRNGKMMRPILVLLVARLYGAVTPATLHAAVSLELLHTASLVHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+++ V+ N+ SVL GD+LL+ + +T + E + +S + LAEGEL QL Sbjct: 92 TERRGQLSVNAVFNNKVSVLAGDYLLATSLVHAEQTNNYEIIRLVSSLGQKLAEGELLQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S N +EE Y VI+ KTA LF+A E ++L V + G +GI FQ+ Sbjct: 152 SNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEYIGICFQIK 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI----NDGKISV 264 DD+ DY + ++GK G D GK TLP + A K+ W I +G + Sbjct: 212 DDIFDYF-DSKKIGKPTGNDMLEGKLTLPALYALN----TTKDAWAEQIAFKVKEGTATP 266 Query: 265 ENLKKAFIIMRENRALVDTEYRAYS---YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + + ++N + EY + Y +KA D L LPDS+ +L +D+ + R Sbjct: 267 DEIVRLIEFTKDNGGI---EYACRTIEQYKKKAFDLLAALPDSNICLALRTYLDYVVAR 322 >gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] Length = 294 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 128/227 (56%), Gaps = 14/227 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y +F+GGKRLRP+LT+A A + + + +ACA+E IHT +L+HDD+ +D+ Sbjct: 32 IHEAMRYSVFAGGKRLRPILTIAAAEAVGGSMEQVMPVACALELIHTYSLVHDDLPAMDN 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE--- 144 RRG+ V+G ++LVGD LL+QAF ++ T + + + ++ V +A Sbjct: 92 DDFRRGRPTNHKVYGEAMAILVGDALLTQAFEVIAGTAVKVSPDKVNQVTLEIARAAGSL 151 Query: 145 -------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + LS + +D +Y+H + KT LF A+ ++++G AL +Y Sbjct: 152 GLIGGQVVDTLSEDQVIDGQVLEYIH--RHKTGALFRVAVRAGAILSGASAEELAALTTY 209 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ+ DD+LD G+ ++GK +G D +N K T P + ++ Sbjct: 210 AEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDVKNKKATYPALYGLEK 256 >gi|157414822|ref|YP_001482078.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 81116] gi|157385786|gb|ABV52101.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|307747460|gb|ADN90730.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter jejuni subsp. jejuni M1] gi|315931736|gb|EFV10691.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 327] Length = 297 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 86/263 (32%), Positives = 142/263 (53%), Gaps = 17/263 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GK+LR L LA A + + AIE IH A+LLHDD++D+S LRRG + Sbjct: 29 SGKKLRSKLLLAIA----DESEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAE 84 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G + ++++GD L S+AF + + ++ +S LA GEL + L + ++ +E Sbjct: 85 FGTKNALMLGDILYSKAFYELSKMDAR-FTSIISDAVVKLAIGELMDVDLGEKFNINKEA 143 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 YL +I +KTAVL A+ +++AG+ + YG NLG+AFQ++DD+LD + + Sbjct: 144 YLKMIYNKTAVLIEASARCGAILAGL---YEKDFAEYGKNLGLAFQMIDDILDIKSDEKI 200 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVENLKKAFIIMRE 276 +GK DF+ GK TLP I ++ ++++ +K +N+ + E LK F E Sbjct: 201 LGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKKDLNENE--KEWLKTKF---EE 255 Query: 277 NRALVDTEYRAYSYGQKAKDSLR 299 +AL A +Y +KA ++ Sbjct: 256 QKALEKAILEAKTYAKKASKAIE 278 >gi|296804410|ref|XP_002843057.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma otae CBS 113480] gi|238845659|gb|EEQ35321.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma otae CBS 113480] Length = 488 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 132/261 (50%), Gaps = 12/261 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RR ++A L +GN+ +VL GDFLL +A + + Sbjct: 231 LAEITELIHTASLLHDDVIDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIARLRD 290 Query: 127 QEALEALSLVACTLAEGELRQLS---LSKNLDVTEED----YLHVIKSKTAVLFSAALEV 179 E +E L V L EGE QL L ++ V ED YL K+A L S + Sbjct: 291 PEVIELLGTVMANLVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLISKSCRA 350 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ V +A +G NLG+AFQLVDD+LDY E+GK G D G T P++ Sbjct: 351 AALLNQSGPEVAEAAYLFGRNLGLAFQLVDDMLDYTVSGEELGKPAGADLELGLATSPLL 410 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A+++ + + +G + + A I+ ++ L T A Y A ++ Sbjct: 411 FAWKQRPELGALVGRKFCREGDVQL-----ARQIVSQSDGLDQTRALAQQYADDAVAAIS 465 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 PDS K L+E+ + R Sbjct: 466 KFPDSDAKDGLIEICRKTINR 486 >gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus str. MIT 9202] gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus str. MIT 9202] Length = 300 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 81/233 (34%), Positives = 129/233 (55%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ + ++Y + +GGKR+RP+L LA+ + + V A AIE IHT +L+HDD+ + Sbjct: 36 EILRESMRYSLLAGGKRIRPILCLASCSLAGGKPSLAVPTAVAIEMIHTMSLIHDDLPAM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSLVAC 138 D+ LRRG+ V+G+ ++L GD LL++AF MV T+ + LSLVA Sbjct: 96 DNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAG 155 Query: 139 T--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L K +D+ +Y+H+ KT L A + ++IAG + QAL Sbjct: 156 APGLVGGQVVDLECEGKEVDLETLEYIHL--HKTGALLKACVRTGAMIAGANEKLLQALT 213 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +Y +G+AFQ++DD+LD ++GK G+D K T P +L + KR Sbjct: 214 TYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLGMEESKKR 266 >gi|110636883|ref|YP_677090.1| geranyltranstransferase [Cytophaga hutchinsonii ATCC 33406] gi|110279564|gb|ABG57750.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Cytophaga hutchinsonii ATCC 33406] Length = 325 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 77/262 (29%), Positives = 135/262 (51%), Gaps = 10/262 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP+LT+ + + +N + A A+E H TL+HDD++D++ LRRG Sbjct: 32 IRYIMDLGGKRMRPLLTILSNYIFTEDTNNVMNAAIAVEVFHNFTLMHDDIMDNAPLRRG 91 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKS-QEALEALSLVACTLAEGELRQLSL 150 K W ++L GD +L +A+ M I+ K ++ L+ + A + EG+ ++ Sbjct: 92 KATVHAKWNTNIAILSGDVMLVEAYKQLMTIDEKYLKQVLDRFNETAAGVCEGQQFDMNF 151 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 ++ +DY+++I+ KTAVL ++E+ ++ L + G++ GI FQL DD Sbjct: 152 ESLPTISVDDYINMIRLKTAVLLGFSMELGGILGDADEKSCTYLNTVGISAGIGFQLKDD 211 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS------- 263 +LD G+ GK +G D K T +I A ++ + K + + D IS Sbjct: 212 LLDVYGDAATFGKQVGGDILANKKTFLLIRALEKAAGKTKKDLEKLLTDKTISDKAKIEG 271 Query: 264 VENLKKAFIIMRENRALVDTEY 285 V N+ I E AL+ + Sbjct: 272 VTNIYDQLGIKEETEALIQQHF 293 >gi|253568985|ref|ZP_04846395.1| octaprenyl-diphosphate synthase [Bacteroides sp. 1_1_6] gi|251841004|gb|EES69085.1| octaprenyl-diphosphate synthase [Bacteroides sp. 1_1_6] Length = 324 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 152/296 (51%), Gaps = 9/296 (3%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V+ ++ GK +RP+L L A + + A ++E +HTA+L+HDDVVD+S Sbjct: 32 LLDSVITHIRKRNGKMMRPILVLLVARLYGAVTPATLHAAVSLELLHTASLVHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+++ V+ N+ SVL GD+LL+ + +T + E + +S + LAEGEL QL Sbjct: 92 TERRGQLSVNAVFNNKVSVLAGDYLLATSLVHAEQTNNYEIIRLVSSLGQKLAEGELLQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S N +EE Y VI+ KTA LF+A E ++L V + G +GI FQ+ Sbjct: 152 SNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEYIGICFQIK 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI----NDGKISV 264 DD+ DY + ++GK G D GK TLP + A K+ W I +G + Sbjct: 212 DDIFDYF-DSKKIGKPTGNDMLEGKLTLPALYALN----TTKDAWAEQIAFKVKEGTATP 266 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + + ++N + Y +KA D L LPDS+ +L +D+ + R Sbjct: 267 DEIVRLIEFTKDNGGIEYACRMIEQYKKKAFDLLATLPDSNICLALRTYLDYVVDR 322 >gi|171912385|ref|ZP_02927855.1| Farnesyltranstransferase [Verrucomicrobium spinosum DSM 4136] Length = 336 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 73/246 (29%), Positives = 131/246 (53%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +L ++E+V L++++ + + + Y+ + GKR+RP L + H Sbjct: 16 ELVKPEIERVEELLMEQARAFDPNVEGYISYVCNTSGKRIRPALAVLAGGATGGVTHEHR 75 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 L+ +E IH A+L+HDD++D + +RR A WGN SVL+GD L + A + + Sbjct: 76 QLSIILEMIHIASLVHDDIMDGATIRREMPTAAAKWGNALSVLLGDSLFAYALELATQFD 135 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++ + +A GE+ Q + ++ E+Y +I+ KTA LF++A E+ + + G Sbjct: 136 ESSICRKIARASRDVACGEILQTQRRFDFTLSMEEYFKIIEMKTAALFASATELGARLNG 195 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 +SV ++ +YG LG A+Q+ DD +D G+ E+GK +G D GK TLP++ + Sbjct: 196 CSDSVVASMYNYGNRLGTAYQIYDDCIDLVGDEKEIGKTLGTDLAKGKLTLPMLFLLRDA 255 Query: 246 TKREKN 251 T ++ Sbjct: 256 TDAQRT 261 >gi|237743842|ref|ZP_04574323.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 7_1] gi|229432873|gb|EEO43085.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 7_1] Length = 326 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 111/211 (52%), Gaps = 3/211 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GK R L L A + +N LA +E H A+L+HDD+VDDS RRGKV+ + Sbjct: 42 GKMFRSKLLLLCAFLGSNWKNNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQ 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +G +V GDFL+++ F EA+ LS + GE+ Q D++E Sbjct: 102 GKYGKDAAVFAGDFLMARIFYYGAVENLNEAVSILSKTVEYMCIGEIEQDLCRYQEDISE 161 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + Y I+ KTA LF AA + + +G + Q L+ + NLG+ FQL DD+LD+ Sbjct: 162 KKYFKNIERKTAALFQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNP 221 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 E+GK +DF+NG T PVI+A + RE Sbjct: 222 KELGKETHKDFQNGIYTFPVIMALKNPKARE 252 >gi|163753596|ref|ZP_02160719.1| putative isoprenyl synthetase [Kordia algicida OT-1] gi|161325810|gb|EDP97136.1| putative isoprenyl synthetase [Kordia algicida OT-1] Length = 324 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 3/239 (1%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +++L K S+ + + + + Y++ GGKRLRP+LTL TA + + A A+E Sbjct: 12 ISYLEEKVTVSEPKNLYEPIIYILQLGGKRLRPVLTLMTAEIFGASPQKALDAALAVEVF 71 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEAL-E 131 H +L+HDD++DD+ LRRGK W T +L GD +L A+ + + K+ AL E Sbjct: 72 HNFSLVHDDIMDDAPLRRGKETVHEKWDINTGILSGDAMLILAYQLFENYKGKTFRALAE 131 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 S A + EG+ + DVT +YL +I+ KTAVL AA+++ +L+A Sbjct: 132 LFSKTAIEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLVGAAMKMGALVAEASEKDA 191 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 Q + +G LG+AFQL DD LD G+ GK +G D K T + A Q + K Sbjct: 192 QGIYDFGRYLGLAFQLQDDYLDAYGDPETFGKQVGGDIIENKKTYLYLKALQNASDANK 250 >gi|82659078|gb|ABB88703.1| geranyl pyrophosphate synthase [Solanum lycopersicum] Length = 415 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 149/301 (49%), Gaps = 24/301 (7%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALMLE------------YRGDNHVL 66 + ++V + +Y G GKR RP +L +ATAL ++ + GD Sbjct: 96 VVAEVPKLASAAEYFFKLGVEGKRFRPTVLLLMATALNVQIPRSAPQVDVDSFSGDLRTR 155 Query: 67 LACA---IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 C E IH A+LLHDDV+DD+ RRG + V GN+ +VL GDFLLS+A + Sbjct: 156 QQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS 215 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ E + L+ V L GE Q++ S + + E Y+ KTA L S + + +L+ Sbjct: 216 LKNTEVVCLLATVVEHLVTGETMQMTTSSDERCSMEYYMQKTYYKTASLISNSCKAIALL 275 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V YG NLG+AFQL+DDVLD+ G +GK D R+G T P++ A + Sbjct: 276 AGHSAEVSVLAFDYGKNLGLAFQLIDDVLDFTGTSATLGKGSLSDIRHGIVTAPILYAME 335 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 E ++ ++ G N++ A + ++R + T A + A ++ LP+ Sbjct: 336 -----EFPQLRTLVDRGFDDPVNVEIALDYLGKSRGIQRTRELARKHASLASAAIDSLPE 390 Query: 304 S 304 S Sbjct: 391 S 391 >gi|225436206|ref|XP_002268229.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 321 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 147/302 (48%), Gaps = 26/302 (8%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALML----------------EYRGD 62 + ++V + +Y G GKR RP +L +ATAL + E R Sbjct: 2 VVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVPLPRPALAEVPETLSTELRTR 61 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + A E IH A+LLHDDV+DD+ RRG + ++ GN+ +VL GDFLLS+A + Sbjct: 62 QQCI-AEITEMIHVASLLHDDVLDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALA 120 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 K+ E + L+ V L GE Q++ + V+ E YL KTA L S + + +L Sbjct: 121 SLKNTEVVSLLATVVEHLVTGETMQMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIAL 180 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AG V YG NLG+AFQL+DDVLD+ G +GK D R+G T P++ A Sbjct: 181 LAGQTAEVSMLAFEYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAI 240 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + + + + N I + A + ++R + T A + A +++ LP Sbjct: 241 EEFPQLDAVVKRGLDNPADIDL-----ALDYLGKSRGIQRTRELAMKHANLAAEAIDSLP 295 Query: 303 DS 304 +S Sbjct: 296 ES 297 >gi|303237329|ref|ZP_07323899.1| polyprenyl synthetase [Prevotella disiens FB035-09AN] gi|302482716|gb|EFL45741.1| polyprenyl synthetase [Prevotella disiens FB035-09AN] Length = 324 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 128/237 (54%), Gaps = 7/237 (2%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 +KY++ GGKR+RP+L + + + Y+ + +L ACA+E H TLLHDD++D++ LR Sbjct: 31 IKYVLDLGGKRIRPILMMLSYNL--YKENPKTILSSACALETYHNYTLLHDDLMDEAPLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKS-QEALEALSLVACTLAEGELRQL 148 RG+ W N ++L GD +L A+ + ++TK Q L + A + EG+ + Sbjct: 89 RGQQTVHTKWNNNQAILSGDSMLVLAYERLAQVDTKHLQAVLNLFTETALQIGEGQQYDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 DVT ++Y+ +I+ KT+VL + A ++ +L+A + L +G +G+AFQL Sbjct: 149 EFEHRNDVTVDEYIEMIRLKTSVLLACATKMGALLADASAEDAENLYKFGEQIGLAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 DD LD G+ GK IG D + K T +I AF +++ + IN E Sbjct: 209 DDYLDVYGDSKVFGKKIGGDITSNKKTYMLITAFNLANDKQRAELEEWINKTAFDTE 265 >gi|282916736|ref|ZP_06324494.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus D139] gi|283770541|ref|ZP_06343433.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus H19] gi|282319223|gb|EFB49575.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus D139] gi|283460688|gb|EFC07778.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus H19] Length = 319 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 90/315 (28%), Positives = 155/315 (49%), Gaps = 23/315 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--GDNHVLLA 68 +++KV + K I S ++ +L+ SGGKR+RP + ++ + + + +A Sbjct: 9 EIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDKQTSEQTYQVA 68 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E IH ATL+HDDV+D S RRGK+ W T++L G+FLL+ ++ K Sbjct: 69 VALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNR 128 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S + GEL Q N T +YL I KTA+L + EV ++ + Sbjct: 129 VHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDK 188 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LK G +G++FQ++DDVLD+ ++GK +G D NG TLP++L ++ Sbjct: 189 ETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNP-- 246 Query: 249 EKNFWKSTINDGKISVENLKK---------AFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 D K+ +E L++ I+R++ ++ + + + Y KA + + Sbjct: 247 ----------DFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLIS 296 Query: 300 CLPDSSWKKSLMEVV 314 LPD K L+ + Sbjct: 297 ELPDGHPKSLLLSLT 311 >gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312] gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT 9312] Length = 300 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 134/256 (52%), Gaps = 25/256 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ + ++Y + +GGKR+RP+L LA+ + V A AIE IHT +L+HDD+ + Sbjct: 36 EILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSLVAC 138 D+ LRRG+ V+G+ ++L GD LL++AF MV T+ + LSLVA Sbjct: 96 DNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAG 155 Query: 139 T--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L K +D+ +Y+H+ KT L A + ++IAG QAL Sbjct: 156 APGLVGGQVVDLECEGKEVDLETLEYIHL--HKTGALLKACVRTGAMIAGANEETLQALT 213 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 +Y +G+AFQ++DD+LD ++GK G+D K T P +L + KR + Sbjct: 214 TYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLGMEESKKRAFDL--- 270 Query: 256 TINDGKISVENLKKAF 271 VEN KKA Sbjct: 271 --------VENAKKAI 278 >gi|227522361|ref|ZP_03952410.1| possible trans-hexaprenyltranstransferase [Lactobacillus hilgardii ATCC 8290] gi|227090499|gb|EEI25811.1| possible trans-hexaprenyltranstransferase [Lactobacillus hilgardii ATCC 8290] Length = 325 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 153/309 (49%), Gaps = 15/309 (4%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLACAIEFIHTA 77 +LK + + + + L+ SGGK LRP + + D A AIE +H A Sbjct: 23 LLKAVTLSNQPVHSRILALLKSGGKLLRPGFFYIYSEFGENIPADKLRAGAAAIELLHVA 82 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEA 132 TL+HDDV+D S LRRG +G + ++ GD+L + F V++ T Q +EA Sbjct: 83 TLIHDDVIDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLKSTHDATDLQRHIEA 142 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + T+ GEL Q++ + D++++DY H I KTA LF + E S+++ + Sbjct: 143 MQ----TILNGELDQMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAILTHAPRDIVT 198 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-GTKREKN 251 G+ +G A+Q+ DD+LDY G+ ++ K + ED ++G TLP+ILA Q GT+ Sbjct: 199 LGGEIGLAIGQAYQIQDDILDYGGDSSQTKKPVLEDLQSGVYTLPLILANQTAGTQLAPL 258 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 K + ++KK I+ ++ L A QK + LP+ + KK L Sbjct: 259 LGKKQ----DLKEADIKKIQEIVIKSGGLKQAHEIANQLTQKTLALINRLPEQNSKKELR 314 Query: 312 EVVDFCLQR 320 + + LQR Sbjct: 315 RLTNLLLQR 323 >gi|302689483|ref|XP_003034421.1| hypothetical protein SCHCODRAFT_106878 [Schizophyllum commune H4-8] gi|300108116|gb|EFI99518.1| hypothetical protein SCHCODRAFT_106878 [Schizophyllum commune H4-8] Length = 382 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 94/310 (30%), Positives = 162/310 (52%), Gaps = 23/310 (7%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GD-----NHVLLACAIEF 73 ++ + + E++ +V +Y K +RP L L TAL + G+ V LA +E Sbjct: 65 IRDLSTSNELLTEVSQYYAKRPSKLMRPRLILLTALAVNASVGERDALPQQVRLAEIVEM 124 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IH +LLHDDV+D+S RRG ++A +GN+ S+L GDF+L +A ++ ++ +A+ + Sbjct: 125 IHVVSLLHDDVIDESDTRRGDLSAPSKFGNKNSILAGDFVLGRAMSLIAALENFDAMREI 184 Query: 134 SLVACTLAEGELRQ----LSLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIA 184 + V TL EGE+ Q ++L + V + Y+ I KT LF+ AL +++++ Sbjct: 185 AGVVTTLVEGEIIQAEDSIALGEKAKVGQAADQWGSYMERIFLKTGSLFARALRSTAMLS 244 Query: 185 GVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYR-GEVNEMGKNIGE-DFRNGKPTLPVIL 240 G+ + + A+ YG LG+AFQ++DD LD++ + GK G D G T PV Sbjct: 245 GLPSDDERVLAVGDYGTELGLAFQIIDDALDFKETSADSAGKPTGAVDLSLGLITAPVFY 304 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + ++ + E ++ I+RE AL T A + QKA+++L+ Sbjct: 305 ALEERPDELAPYVSRKCSEPGDTAEVVR----IVRETSALPRTYALAAQHAQKAREALQV 360 Query: 301 LPDSSWKKSL 310 LP + + +L Sbjct: 361 LPSTPARDAL 370 >gi|118404002|ref|NP_001072229.1| prenyl (decaprenyl) diphosphate synthase, subunit 1 [Xenopus (Silurana) tropicalis] gi|110645682|gb|AAI18814.1| trans-prenyltransferase [Xenopus (Silurana) tropicalis] Length = 292 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 144/292 (49%), Gaps = 12/292 (4%) Query: 36 YLIFSGGKRLRPMLT--LATALMLEYRGDNHV-----LLACAIEFIHTATLLHDDVVDDS 88 Y GK RPML +A A + Y V +A E IHTA+L+HDDV+D S Sbjct: 4 YYFDGKGKAFRPMLVVLMARACNIHYNNCREVHPSQRTIAEISEMIHTASLVHDDVIDGS 63 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRGK +WG + +VL GD +LS A + + + +S +A L GE QL Sbjct: 64 DSRRGKQTVSGIWGERKAVLAGDLMLSVAAVAMARIGNTTVIALISQIAIDLVRGEFLQL 123 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 +N + Y+ KTA L + + + S++A +V + YG N+GIAFQL+ Sbjct: 124 GSKENENERFSHYIEKTFKKTASLIANSCKAVSVLACPDPAVHEIAYQYGKNIGIAFQLI 183 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DDVLD+ +++GK D + G T PV+ A Q+ + + G +++ Sbjct: 184 DDVLDFTSCADQLGKPAAADLKLGLATGPVLFACQQFPELNDLIMRRFSLPG-----DVE 238 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +A+ + ++ + T Y A SY +A +R L S +++L+++ + L R Sbjct: 239 RAWQYVLQSDGVRQTTYLAQSYCNQAVQEIRKLQPSPEREALIQLTEIVLTR 290 >gi|29348670|ref|NP_812173.1| octaprenyl-diphosphate synthase [Bacteroides thetaiotaomicron VPI-5482] gi|29340575|gb|AAO78367.1| octaprenyl-diphosphate synthase [Bacteroides thetaiotaomicron VPI-5482] Length = 324 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 155/299 (51%), Gaps = 15/299 (5%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V+ ++ GK +RP+L L A + + A ++E +HTA+L+HDDVVD+S Sbjct: 32 LLDSVITHIRKRNGKMMRPILVLLVARLYGAVTPATLHAAVSLELLHTASLVHDDVVDES 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+++ ++ N+ SVL GD+LL+ + +T + E + +S + LAEGEL QL Sbjct: 92 TERRGQLSVNAIFNNKVSVLAGDYLLATSLVHAEQTNNYEIIRLVSSLGQKLAEGELLQL 151 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S N +EE Y VI+ KTA LF+A E ++L V + G +GI FQ+ Sbjct: 152 SNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEYIGICFQIK 211 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI----NDGKISV 264 DD+ DY + ++GK G D GK TLP + A K+ W I +G + Sbjct: 212 DDIFDYF-DSKKIGKPTGNDMLEGKLTLPALYALN----TTKDAWAEQIAFKVKEGTATP 266 Query: 265 ENLKKAFIIMRENRALVDTEYRAYS---YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + + ++N + EY + Y +KA D L LPDS+ +L +D+ + R Sbjct: 267 DEIVRLIEFTKDNGGI---EYACRTIEQYKKKAFDLLAALPDSNICLALRTYLDYVVAR 322 >gi|260495254|ref|ZP_05815382.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_33] gi|260197311|gb|EEW94830.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_33] Length = 326 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 110/211 (52%), Gaps = 3/211 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GK R L L A + +N LA +E H A+L+HDD+VDDS RRGKV+ + Sbjct: 42 GKMFRSKLLLLCAFLGSNWKNNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQ 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +G +V GDFL+++ F EA+ LS + GE+ Q D++E Sbjct: 102 GKYGKDAAVFAGDFLMARIFYYGAVENLNEAVSILSKTVEYMCIGEIEQDLCRYQEDISE 161 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 Y I+ KTA LF AA + + +G + Q L+ + NLG+ FQL DD+LD+ Sbjct: 162 NKYFENIERKTAALFQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNS 221 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 E+GK +DF+NG T PVI+A + RE Sbjct: 222 KELGKETHKDFQNGIYTFPVIMALKNPKARE 252 >gi|332882802|ref|ZP_08450413.1| heptaprenyl diphosphate synthase component 2 family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679304|gb|EGJ52290.1| heptaprenyl diphosphate synthase component 2 family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 322 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 82/242 (33%), Positives = 132/242 (54%), Gaps = 15/242 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 + Y++ GGKRLRP+LTL A + + GD L A A+E H +L+HDD++D+++LR Sbjct: 31 IDYILQLGGKRLRPVLTLIAADL--FGGDYRKALPAAAAVEVFHNFSLVHDDIMDNASLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----SLVACTLAEGELRQ 147 RGK W + ++L GD +L A+C+ +++ + AL S A + EG+ Sbjct: 89 RGKATVHQKWNSNIAILSGDAMLISAYCL-LDSYPPDTFAALAKLFSKTALEVCEGQQWD 147 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + V+ YL +I+ KTAVL AAL++ ++IAG ++ + +G+ +G+AFQL Sbjct: 148 MDFETQAQVSIPQYLQMIRYKTAVLVGAALQMGAIIAGASIENQRLIYDFGVTIGLAFQL 207 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN-----FWKSTINDGKI 262 DD LD G+ GK IG D K T+ + A + ++N + S ND KI Sbjct: 208 QDDYLDTFGD-EAFGKKIGGDILENKKTILYLKALDLADEAQRNTLIAQYTTSEENDAKI 266 Query: 263 SV 264 ++ Sbjct: 267 AI 268 >gi|326921623|ref|XP_003207056.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Meleagris gallopavo] Length = 336 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 94/321 (29%), Positives = 154/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L KD++ + I K + + ++ +Y GK RPM+ +A A + + Sbjct: 19 LGRKDLKNLYEDIKKELLVSTAELREMCEYYFDGKGKAFRPMIVVLMARACNIHHSNSRE 78 Query: 65 VL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD+ RRGK+ +WG + +VL GDF+LS A Sbjct: 79 VQASQRSVAIIAEMIHTASLVHDDVIDDANSRRGKMTVNQIWGERKAVLAGDFILSAASL 138 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 139 ALARIGNTTIISVLTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 198 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+++ V + YG N+GIAFQL+DDVLD+ + +GK D + G T PV+ Sbjct: 199 VSILSCPDPKVHEIAYQYGKNIGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPVL 258 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A ++ + + G VE +K + ++ + T Y A Y +A +R Sbjct: 259 FACRQFPEMNAMIMRRFSKPG--DVERARKYVL---QSDGVQQTTYLAQRYCHEATREIR 313 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S +++L+++ + L R Sbjct: 314 KLRPSPEREALIQLTEMVLVR 334 >gi|326772137|ref|ZP_08231422.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Actinomyces viscosus C505] gi|326638270|gb|EGE39171.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Actinomyces viscosus C505] Length = 369 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 97/328 (29%), Positives = 157/328 (47%), Gaps = 20/328 (6%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM----LEY 59 LE + ++ + +++ + S E I +L +GGKRLRP+L L TA + L Sbjct: 12 LESRIIPALQTIEDRLMEVVTSADETINPPTSHLAEAGGKRLRPVLALLTAQLGDPALAA 71 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G+ A+E H ATL HDDV+D++ LRRG +A+ VWGN ++L GD L+++A Sbjct: 72 TGEEIRDAGVAVELTHIATLYHDDVMDEAPLRRGAPSAQTVWGNSAAILTGDVLVARA-S 130 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 ++ EA+ A + L G+L + L D + Y+ V+ KT L + + Sbjct: 131 QLVAALGPEAVMAHAKTFERLCMGQLHETLPRPAGTDPVDH-YIQVLADKTGSLIAVSAR 189 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 +++ G Q ++ +G +G+AFQL DDV+D + GK G D R G T+PV Sbjct: 190 YGAMLTGAGTRTEQIVEEFGERIGVAFQLADDVIDLMSDSATTGKTPGTDLREGVDTMPV 249 Query: 239 ILAFQRGTKREKNFWKSTI----NDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQK 293 +L + E + I + G +S + L +RE+ L T A + + Sbjct: 250 LLLRKALAAGELDAAGQAILSRLSSGDLSDDAFLSDVVARLREHPVLARTREMAMDWAAQ 309 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A + L L ++ V+D QRL Sbjct: 310 AVEGLEGLEEA--------VLDGTRQRL 329 >gi|116512181|ref|YP_809397.1| geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp. cremoris SK11] gi|116107835|gb|ABJ72975.1| Geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp. cremoris SK11] Length = 319 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 98/296 (33%), Positives = 147/296 (49%), Gaps = 23/296 (7%) Query: 34 VKYLIF----SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 VK IF +GGK LRP L + + + LA ++E +HTATL+HDDV+D + Sbjct: 36 VKSAIFDIFDAGGKMLRPAYLLLFSGFTDLSESERLALAASVEMMHTATLVHDDVIDHAD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----LAEGE 144 RRG +G + +V GD+L F VI S+ +LE +L L GE Sbjct: 96 TRRGVATLSAKYGPEIAVYAGDYL----FIAVIRLMSEHSLELSNLTKNIGSIERLLGGE 151 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L QL+ NL T +DY+ I KT LF+ + V+ LI+ ++A K GMN+GI+ Sbjct: 152 LGQLNHYFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNALTKRAYK-IGMNIGIS 210 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ++DD LDY +GK + ED + G + PV+ A Q E N S + I Sbjct: 211 FQIMDDYLDYASTAQTLGKPVLEDIKQGIYSAPVLFALQ-----ENNALVSEL----IKN 261 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E + + ++ + AL T+ A SY A + + LP ++ + E+ L+R Sbjct: 262 EKFDEVYDFIKTSDALEKTKELAKSYTLSALNLIDKLPKGKNRELIAEITRKLLER 317 >gi|76802484|ref|YP_327492.1| trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase ) [Natronomonas pharaonis DSM 2160] gi|76558349|emb|CAI49939.1| probable trifunctional short-chain (E)-prenyl diphosphate synthase (probable dimethylallyltransferase / probable geranyltranstransferase / probable farnesytranstransferase) [Natronomonas pharaonis DSM 2160] Length = 341 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 35/311 (11%) Query: 35 KYLIFSGGKRLRPMLTLATA--------LMLEYR------GDNHVLLACA--IEFIHTAT 78 +YL+ +GGKRLRP + L A L +YR GD +L+ A IE I + T Sbjct: 39 RYLLDAGGKRLRPTILLLAAESLADVEPLSADYRQFPSLPGDEVDVLSAAVSIEVIQSFT 98 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEAL 133 L+HDD++DD LRRG A + +T++L GD L S+AF +++T +S EAL+ L Sbjct: 99 LIHDDIMDDDDLRRGVPAVHREYDLETAILAGDTLYSKAFEYMLDTGAPAERSVEALDEL 158 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + + EG+ + DVT E+YL +++ KTAVL++AA + +++ G + +A Sbjct: 159 ATTCTEICEGQALDVDFENRSDVTTEEYLEMVEFKTAVLYAAAASIPAILLGSDDETVEA 218 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L YG+++G AFQ+ DD+LD +E+GK G D K T+ + A +G E Sbjct: 219 LHGYGLDIGRAFQIQDDLLDLTAPSDELGKQRGSDLVENKRTVITLHARDQGIDVE-GLV 277 Query: 254 KSTINDGKI--SVENLKKAFII--MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 +D +I +V+ L+ A I RE A K+ L LP++ ++ Sbjct: 278 SDDPSDAEIEAAVQTLEDAGSIDFARE---------MALDLVTSGKERLDVLPENEARQL 328 Query: 310 LMEVVDFCLQR 320 L ++ DF ++R Sbjct: 329 LEDIADFLVER 339 >gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506] gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506] Length = 308 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 127/239 (53%), Gaps = 11/239 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L LAT +L + + ACA E HT +L+HDD+ + Sbjct: 43 EKIYEAMRYSLLAGGKRLRPILCLATCELLGGTVEMAMPTACAFEMSHTMSLIHDDLPAM 102 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVA------- 137 D+ RRGK+ V+G ++L GD LL+ AF + +T++ + L +VA Sbjct: 103 DNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEFIAAQTQNVPPQQVLQVVARLGRAVG 162 Query: 138 -CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ L DV+EE + KT L A + +++AG + + Q L Sbjct: 163 AAELVGGQVVDLESEGVSDVSEETLNFIHTHKTGALLEACVVCGAILAGAEPTDLQRLSR 222 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y N+G+AFQ+VDD+LD E+GK G+D + GK T P + + +R K ++ Sbjct: 223 YAQNIGLAFQIVDDILDITATQEELGKTAGKDVQAGKVTYPSLWGIEESKRRAKQLVEA 281 >gi|222636085|gb|EEE66217.1| hypothetical protein OsJ_22362 [Oryza sativa Japonica Group] Length = 463 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 96/323 (29%), Positives = 159/323 (49%), Gaps = 30/323 (9%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALMLEYRGDNHV----LLACAI--- 71 + ++V + +Y G GKR RP +L +A+AL V +LA + Sbjct: 144 VAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSDSTEVGVLTILANKLRTR 203 Query: 72 --------EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 E IH A+LLHDDV+DD+ RRG + + GN+ SVL GDFLLS+A + Sbjct: 204 QQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNCIMGNKLSVLAGDFLLSRACVALAA 263 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E + ++ L GE Q+S S+ + + YL KTA L S + + +++ Sbjct: 264 LGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMDYYLQKTYYKTASLISNSCKAVAIL 323 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V YG NLG+AFQL+DDVLD+ G +GK D R+G T P++ A + Sbjct: 324 AGHTADVSMLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLTDIRHGIITAPMLYAME 383 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 E ++ G + N++ A ++++R + T+ A + +A ++ LPD Sbjct: 384 -----EFPQLHEVVDRGFDNPANVELALDYLQKSRGIEKTKELAREHANRAIKAIEALPD 438 Query: 304 S------SWKKSLMEVVDFCLQR 320 S + +++L+++ + + R Sbjct: 439 SDDEDVLTSRRALIDITERVITR 461 >gi|189461913|ref|ZP_03010698.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136] gi|189431307|gb|EDV00292.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136] Length = 327 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 78/247 (31%), Positives = 133/247 (53%), Gaps = 17/247 (6%) Query: 19 ILKRICSDVEMIP---------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-- 67 +LK+I + +E +P D ++Y++ GGKRLRP+L L + ++ D + Sbjct: 9 LLKQIHAYIESLPYSHEPKGLYDPIEYVLGLGGKRLRPVLMLLAYNL--FKEDVQAIFSQ 66 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---- 123 A AIE H TLLHDD++D + +RRGK W T++L GD +L +F +++ Sbjct: 67 AAAIETYHNFTLLHDDLMDKADMRRGKPTVHKKWDENTAILSGDAMLILSFQFMMQGCPV 126 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + + ++ S A + +G+ + DVT ++Y+ +I+ KT+VL + AL++ +++ Sbjct: 127 EYTHQVMDIFSRTALEVCDGQQWDMEFESREDVTVDEYMEMIRLKTSVLLAGALKIGAVL 186 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G Q L +G+ +G+AFQL DD LD G+ GKNIG D K T +I A + Sbjct: 187 GGASEKDAQLLYDFGIQIGLAFQLQDDYLDVYGDPLVFGKNIGGDILCNKKTFMLITALE 246 Query: 244 RGTKREK 250 + + + Sbjct: 247 KSDDKTR 253 >gi|163786604|ref|ZP_02181052.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1] gi|159878464|gb|EDP72520.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1] Length = 330 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 14/297 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y++ GGKRLRP+LTL TA + N + A ++E H +L+HDD++D++ LRRG Sbjct: 37 INYILKLGGKRLRPVLTLMTAEVFGEEAKNAMNAALSVEVFHNFSLVHDDIMDEAPLRRG 96 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----SLVACTLAEGELRQLS 149 K W T +L GD +L A+ + E E AL S A + EG+ + Sbjct: 97 KKTVHEKWNLNTGILSGDAMLILAY-QLFENYEPETFLALAKLFSKTALEVCEGQQYDID 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 DVT +YL +I+ KTAVL AA+++ +++A + A+ +G LG+AFQL D Sbjct: 156 FETRNDVTIPEYLKMIEYKTAVLVGAAMKMGAIVAKASAEDQNAIYDFGSYLGVAFQLQD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS----VE 265 D LD G GK +G D K T + + G+ EK ++ IS VE Sbjct: 216 DYLDAFGNPETFGKQVGGDILENKKTYLYLKTIELGSGIEKTSLVEKMSSKSISDNDKVE 275 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 ++K F + A T+ Y KA L L S KK L+ + F Q +N Sbjct: 276 SVKALF---NNSGASEATQNAVKKYTNKAFKVLETLNISEDKKQLLRL--FGEQLMN 327 >gi|329767887|ref|ZP_08259401.1| hypothetical protein HMPREF0428_01098 [Gemella haemolysans M341] gi|328838675|gb|EGF88274.1| hypothetical protein HMPREF0428_01098 [Gemella haemolysans M341] Length = 315 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 76/243 (31%), Positives = 129/243 (53%), Gaps = 3/243 (1%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--LEYRGDNHVLLACAIEFIHTATLLH 81 C D + + +++K +GGKR+R +L L A + E + + +A +E IHTA+L+H Sbjct: 22 CDD-DRLNEIIKRYFLNGGKRVRVLLLLMCAKLGNFELNRKDIIRMASIVEIIHTASLIH 80 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DD++D++ RRG + + N+ ++ VGD+L + V + + L+ L Sbjct: 81 DDIIDNADTRRGSITMNKEYTNEFALHVGDYLFAIVLNEVAKFSDERIHNYLAETLKELC 140 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 GEL Q N+ DYL IK KTA+L + A S+++ + ++ SYG L Sbjct: 141 IGELIQADGLYNIKTRRIDYLKKIKRKTAILIAFACVAGSIVSKASDENIKSAFSYGYYL 200 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G+++Q++DD LD+ G +GK +G+D NG TLP +LA + ++ NF T + K Sbjct: 201 GMSYQIIDDYLDFAGGAENLGKEVGQDLMNGNITLPALLAKEENSELFSNFTGETSTEEK 260 Query: 262 ISV 264 + Sbjct: 261 TEI 263 >gi|291514401|emb|CBK63611.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301] Length = 323 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 152/309 (49%), Gaps = 22/309 (7%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 N+L ++ E++ + Y + GGKRLRPML + + + A A+E H Sbjct: 13 NYLAQTEFPAEPELLYAPIGYSLAGGGKRLRPMLLTLSCGIFSDDVKQALPAAAAVEVFH 72 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEA 132 TLLHDD++D++A+RRGK + WG ++L GD ++ A+ ++ + + L Sbjct: 73 NFTLLHDDIMDNAAVRRGKPSVHAKWGQNVAILSGDAMMIYAYRLLSSVPANLLPQVLST 132 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + +A + EG+ + + V+ +Y+H+I+ KT+VL + ++ + +++ G + + Sbjct: 133 FNTMALEVCEGQQYDMDFEQKPKVSVVEYMHMIELKTSVLLAGSVVIGAMLGGASDEDCR 192 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+ + + LG+AFQL DD+LD G+ +GK IG D GK T +I A + + Sbjct: 193 RLRRFAVELGLAFQLQDDLLDSYGD-QRLGKAIGGDILEGKKTYLMITAMSHADEATREM 251 Query: 253 WKSTINDGKIS----------------VENLKKAFIIMRENRAL--VDTEYRAYSYGQKA 294 ++ D +S V L + I +R RAL +DT A S Q+ Sbjct: 252 LRTAYRDPALSDAEKIGKVKSIYDRLDVPRLTEQQIQLRFERALSILDTLSVAPSRTQRM 311 Query: 295 KDSLRCLPD 303 +D L D Sbjct: 312 RDYAMSLMD 320 >gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263] Length = 309 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 84/250 (33%), Positives = 134/250 (53%), Gaps = 28/250 (11%) Query: 31 PDVV----KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV 84 PD++ KY +F+GGKR+RP+L + T M + GD V + ACAIE IHT +L+HDD+ Sbjct: 40 PDIIVSAMKYSLFAGGKRVRPILLMETCAM--FGGDERVAIPFACAIEMIHTYSLIHDDL 97 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-------TKSQEALEALSL 135 +D+ LRRG+ V+G ++L GD LL+ A +E + + ALSL Sbjct: 98 PAMDNDDLRRGEPTNHKVYGENIAILAGDALLNAAVETAVEGIETMEPAERARGIAALSL 157 Query: 136 V-----ACTLAEGELRQLSLSKNLDVTEED---YLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + + G+ L L+++ D ED Y+H KT L +AA+ + +++AG Sbjct: 158 LMRAAGVNGMIGGQTGDL-LAEDDDAINEDKIVYIHA--HKTGALLTAAVLIGAVLAGAS 214 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +QAL++YG +G+AFQ+VDD+LD E +GK +G D K T + + Sbjct: 215 EDEQQALRNYGSAIGMAFQVVDDILDVESETAVLGKPVGSDAEESKTTFVSLFGLESAKV 274 Query: 248 REKNFWKSTI 257 + + + + I Sbjct: 275 KAEEYHQEAI 284 >gi|312891447|ref|ZP_07750964.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603] gi|311296141|gb|EFQ73293.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603] Length = 324 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 81/231 (35%), Positives = 128/231 (55%), Gaps = 10/231 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA--CAIEFIHTATLLHDDVVDDSALR 91 + Y++ GGKRLRP L L M + GD LA AIE H TL+HDD++D + LR Sbjct: 31 IYYIMALGGKRLRPCLLLMACDM--FGGDVQQALAPALAIEVFHNFTLMHDDIMDKAPLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQL 148 RGK W ++L GD ++ +A ++++ + L+ + A + EG+ + Sbjct: 89 RGKPTVHEKWNANVAILSGDVMMVEANKLIMQVDDRILRPVLDVFNDTAVGVCEGQQIDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + VT ++Y+++I+ KTAVL + AL++ +L+ G ++ L S+G LGIAFQL Sbjct: 149 NFETLTHVTIDEYINMIRLKTAVLVAGALKMGALVGGADDAEASLLYSFGEQLGIAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--RG-TKREKNFWKST 256 DD+LD G+ + GK +G D + K T +I A + +G T E N+W S Sbjct: 209 DDILDVYGDPKKFGKQVGGDIISNKKTYLLIKAMELAKGETLTELNYWISA 259 >gi|332639921|pdb|3RMG|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Bacteroides Thetaiotaomicron gi|332639922|pdb|3RMG|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Bacteroides Thetaiotaomicron Length = 334 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 155/299 (51%), Gaps = 15/299 (5%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ V+ ++ GK +RP+L L A + + A ++E +HTA+L+HDDVVD+S Sbjct: 34 LLDSVITHIRKRNGKMMRPILVLLVARLYGAVTPATLHAAVSLELLHTASLVHDDVVDES 93 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+++ ++ N+ SVL GD+LL+ + +T + E + +S + LAEGEL QL Sbjct: 94 TERRGQLSVNAIFNNKVSVLAGDYLLATSLVHAEQTNNYEIIRLVSSLGQKLAEGELLQL 153 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S N +EE Y VI+ KTA LF+A E ++L V + G +GI FQ+ Sbjct: 154 SNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEYIGICFQIK 213 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI----NDGKISV 264 DD+ DY + ++GK G D GK TLP + A K+ W I +G + Sbjct: 214 DDIFDYF-DSKKIGKPTGNDMLEGKLTLPALYALN----TTKDAWAEQIAFKVKEGTATP 268 Query: 265 ENLKKAFIIMRENRALVDTEYRAYS---YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + + ++N + EY + Y +KA D L LPDS+ +L +D+ + R Sbjct: 269 DEIVRLIEFTKDNGGI---EYACRTIEQYKKKAFDLLAALPDSNICLALRTYLDYVVAR 324 >gi|302348132|ref|YP_003815770.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans 345-15] gi|302328544|gb|ADL18739.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans 345-15] Length = 338 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 106/345 (30%), Positives = 172/345 (49%), Gaps = 40/345 (11%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVK-----------YLIFSGGKRLRPMLTLATAL 55 +T DM ++ + + SD I DVVK +LI +GGKRLRP++ LATA Sbjct: 1 MTFDDMNELVEKYVPLVNSD---IYDVVKGAPEELYNASLHLIKAGGKRLRPLVVLATAR 57 Query: 56 ML-----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110 L E R + LA A+E H TL+HDD++D+ RRG V+G ++ G Sbjct: 58 ALGGVDAEARA---IPLASAVEIFHNFTLVHDDIMDNDDFRRGVPTVHKVYGVPLAITAG 114 Query: 111 DFLLSQAFCMVIETKSQ--------EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162 D + S +F ++ + + +A++AL+ + +AEG+ + ++ +V EDYL Sbjct: 115 DLMFSLSFASILRSLEKGLDEEYVIKAVQALTEASRKVAEGQGYDMLFERSWNVDAEDYL 174 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 +I KT L A+ ++ ++ A ++ V + + YG +G+AFQ+ DD+L G+ ++ G Sbjct: 175 RMIYLKTGALVEASAKLGAIAAKAKDEVIETMGEYGRLVGLAFQIRDDILGVFGDPSKTG 234 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREK-NFWKSTINDGKISVENLKKAFIIMRENRALV 281 K + D R GK T ILA + + EK I +G S E LK+A ++ AL Sbjct: 235 KPVYSDLRRGKKT---ILALKAASSNEKVKELLIDIFNGDSSEEKLKEAAEAIKSTGALD 291 Query: 282 DTEYRAYSYGQKAKDSLRCLP------DSSWKKSLMEVVDFCLQR 320 + A SY + A + L L D ++L ++ F QR Sbjct: 292 YAQGLANSYSRLAVEKLDMLKASGLIVDEKAYRALRDLAVFSAQR 336 >gi|115469526|ref|NP_001058362.1| Os06g0678200 [Oryza sativa Japonica Group] gi|52076633|dbj|BAD45534.1| putative geranyl diphosphate synthase [Oryza sativa Japonica Group] gi|52076919|dbj|BAD45931.1| putative geranyl diphosphat synthase [Oryza sativa Japonica Group] gi|113596402|dbj|BAF20276.1| Os06g0678200 [Oryza sativa Japonica Group] gi|125556476|gb|EAZ02082.1| hypothetical protein OsI_24162 [Oryza sativa Indica Group] gi|215765303|dbj|BAG87000.1| unnamed protein product [Oryza sativa Japonica Group] Length = 430 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 96/323 (29%), Positives = 159/323 (49%), Gaps = 30/323 (9%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALMLEYRGDNHV----LLACAI--- 71 + ++V + +Y G GKR RP +L +A+AL V +LA + Sbjct: 111 VAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSDSTEVGVLTILANKLRTR 170 Query: 72 --------EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 E IH A+LLHDDV+DD+ RRG + + GN+ SVL GDFLLS+A + Sbjct: 171 QQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNCIMGNKLSVLAGDFLLSRACVALAA 230 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E + ++ L GE Q+S S+ + + YL KTA L S + + +++ Sbjct: 231 LGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMDYYLQKTYYKTASLISNSCKAVAIL 290 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V YG NLG+AFQL+DDVLD+ G +GK D R+G T P++ A + Sbjct: 291 AGHTADVSMLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLTDIRHGIITAPMLYAME 350 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 E ++ G + N++ A ++++R + T+ A + +A ++ LPD Sbjct: 351 -----EFPQLHEVVDRGFDNPANVELALDYLQKSRGIEKTKELAREHANRAIKAIEALPD 405 Query: 304 S------SWKKSLMEVVDFCLQR 320 S + +++L+++ + + R Sbjct: 406 SDDEDVLTSRRALIDITERVITR 428 >gi|311748420|ref|ZP_07722205.1| polyprenyl synthetase [Algoriphagus sp. PR1] gi|126576932|gb|EAZ81180.1| polyprenyl synthetase [Algoriphagus sp. PR1] Length = 328 Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 116/211 (54%), Gaps = 3/211 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y++ GGKR+RP+L+L M + A AIE H TL+HDD++D + LRRG Sbjct: 34 INYILNIGGKRIRPLLSLLAYGMYAENPGKILSQASAIEVFHNFTLMHDDIMDQAPLRRG 93 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQLSL 150 W ++L GD +L +A+ +++ET+ E + + A + EG+ ++ Sbjct: 94 NATVHEKWDANIAILSGDVMLVKAYDLLMETEPALLPEIIRLFNKTAADVCEGQQFDMNF 153 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 V E+DYL++I+ KTAVL AL++ +++ G + L +G+N+GI FQL DD Sbjct: 154 ENQDHVNEKDYLNMIRLKTAVLLGCALKMGAILGGASSDEAHRLYEFGVNVGIGFQLKDD 213 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +LD + + GK +G D + K T +I A Sbjct: 214 LLDVFADQEKFGKQVGGDIISNKKTFLLIKA 244 >gi|291277470|ref|YP_003517242.1| polyprenyl synthetase [Helicobacter mustelae 12198] gi|290964664|emb|CBG40519.1| polyprenyl synthetase [Helicobacter mustelae 12198] Length = 298 Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 97/279 (34%), Positives = 154/279 (55%), Gaps = 26/279 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH--VLLACAI-EFIHTATLLHDDV 84 E I D K+L GK LR L LA A NH V+ CAI E I A+LLHDDV Sbjct: 22 EEILDFCKHL--QNGKMLRSRLILAIA-------PNHPDVIKLCAIVEMIQNASLLHDDV 72 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +DDS LRRG + ++GN+ S+++GD S+AF +++ + +++S L+ GE Sbjct: 73 IDDSLLRRGNPSINALFGNKNSIMLGDVFYSKAFFELLDL-DKRITKSISDCVVRLSRGE 131 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + + +S+ YL++I+ KTA L +++ +S++A + V++ +YG+NLGIA Sbjct: 132 ISDVMMSRAFQPDFLKYLNMIEDKTASLVASSAMSASILANL--DVKKHY-NYGLNLGIA 188 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDG 260 FQ+VDD+LD G+ +GK D+ GK TLP IL ++R + +++ +++K D Sbjct: 189 FQIVDDLLDVFGDDKTLGKPAMNDYAEGKTTLPYILLYERSSPKDRQELVSYFKK--QDP 246 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 +IS L K M E + A YG A D+++ Sbjct: 247 EISAWILAK----MHEYEIFPLAQKIARDYGVLALDAIK 281 >gi|189192558|ref|XP_001932618.1| decaprenyl-diphosphate synthase subunit 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187974224|gb|EDU41723.1| decaprenyl-diphosphate synthase subunit 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 385 Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 133/261 (50%), Gaps = 12/261 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RR +A + +GN+ +VL GDFLL +A + + Sbjct: 128 LAEITELIHTASLLHDDVIDHSVSRRSAPSANVEFGNKMAVLAGDFLLGRASVALARLRD 187 Query: 127 QEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVIKSKTAVLFSAALEV 179 E E L+ V L EGE QL + KN TE+ YL K+A L S + Sbjct: 188 PEVTELLATVIANLVEGEFMQLKNTARDDKNPAWTEDTVSYYLQKTYLKSASLISKSCRA 247 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++++ G V +A YG NLG+AFQLVDD+LDY E+GK G D G T P++ Sbjct: 248 AAILGGSTPDVVEAAYLYGKNLGLAFQLVDDMLDYTVSEAELGKPAGADLELGLATAPLL 307 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ + + G ++++A I+ + L T A Y KA +++ Sbjct: 308 FAWKEDESLGRLVGRKFSQQG-----DVQRAREIVARSSGLEQTRALAQEYVDKAIEAIS 362 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 P+S K L+E+ ++R Sbjct: 363 FFPESEAKTGLVEMCTKVMKR 383 >gi|282877390|ref|ZP_06286213.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310] gi|281300442|gb|EFA92788.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310] Length = 324 Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 119/220 (54%), Gaps = 3/220 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP L L + ++ ++ AC IE H TLLHDD++D + LRRG Sbjct: 31 IEYVLSLGGKRIRPTLMLLAYNLYREHPEDILMPACGIETYHNYTLLHDDLMDQADLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQLSL 150 W T++L GD +L A+ + + + +E ++ + A + EG+ + Sbjct: 91 HETVHKRWDANTAILSGDSMLVLAYQRMAQCRPDKLKEVIDLFTQTALEIGEGQQYDMDF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DVTE++Y+ +I+ KT+VL + AL++ +++ L +G +G+AFQL DD Sbjct: 151 EHRNDVTEDEYIEMIRLKTSVLLACALKIGAILGDASAEDANNLYRFGEKIGLAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LD G+ GK IG D + K T +I AF R +++ Sbjct: 211 FLDVYGDSKVFGKAIGGDIVSNKKTYMLINAFNRADAQQR 250 >gi|296268287|ref|YP_003650919.1| trans-hexaprenyltranstransferase [Thermobispora bispora DSM 43833] gi|296091074|gb|ADG87026.1| Trans-hexaprenyltranstransferase [Thermobispora bispora DSM 43833] Length = 331 Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 85/320 (26%), Positives = 160/320 (50%), Gaps = 6/320 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 ++ EDL + +V ++ + S+ I + ++++ +GGKR R ML L A + + Sbjct: 15 RLAEDLA-TGLAEVERMLRASVESEDAFITEAARHVMEAGGKRFRAMLVLLAAQFGDPKA 73 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 V A IE H ATL HDDV+D + +RRG +A +G+ ++L GD+L +QA + Sbjct: 74 PAVVPGAVVIELTHLATLYHDDVMDQAPMRRGLPSANARFGDTVAILTGDYLFAQA-SEI 132 Query: 122 IETKSQEALEALSLVACTLAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + EA+ + L G++R+ + + +D YL V+ KT L + + Sbjct: 133 LADLGAEAIRVQARTFSRLVRGQIRETIGPPEGMDPITH-YLQVLADKTGSLIATSGRFG 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G V L +G+A+QL DD++D + + GK G D R G TLPV+ Sbjct: 192 AMLSGAPREVEDRLAGACEAIGVAWQLGDDIIDVVSDGSVSGKTPGTDLREGVRTLPVLY 251 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A ++ + G ++ +++++A ++R + A+ + +AK +L Sbjct: 252 ALASTDPADERL--RMLLSGPVAEQDIEEALTLLRAHPAMDMARKELVKWADQAKGALSG 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD + +L+ + D+ ++R Sbjct: 310 LPDIPARTALIRLCDWVVER 329 >gi|297170662|gb|ADI21686.1| geranylgeranyl pyrophosphate synthase [uncultured Verrucomicrobiales bacterium HF0130_14P10] Length = 344 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/266 (30%), Positives = 137/266 (51%), Gaps = 8/266 (3%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + D+ + SGGKR+RP L A + +N + + +EF+H ATL+HDDV+DD++ Sbjct: 46 VRDLAVQALASGGKRIRPALVHACGIGNLAVSENLLKASSIVEFVHVATLVHDDVLDDAS 105 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 +RR + G ++L+GD L + A M E + E ++ GE++Q Sbjct: 106 IRRDRQTVYADRGATAAILLGDALFAHALEMASEFQGNEVCRWVAAATRRTCSGEIQQSF 165 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 L + +T Y +I++KTA LF+ + + + +AG+ N+ +G LG+A+Q+ D Sbjct: 166 LRGDFTLTSSRYKLIIEAKTAELFTVSCRLGAHVAGLDNATSALACEFGRRLGLAYQIYD 225 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN-FWKSTINDGK------- 261 D++D G + GK++G D +GK TLP I F + +K E + ++ N G Sbjct: 226 DLVDVFGREADFGKSLGRDLAHGKVTLPTITLFSKLSKLEASRLHENLFNSGPEPNPEII 285 Query: 262 ISVENLKKAFIIMRENRALVDTEYRA 287 + NL + + E R L+D E A Sbjct: 286 HEMVNLMRKHGVHHECRELLDEELSA 311 >gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1] gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1] Length = 294 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 85/269 (31%), Positives = 137/269 (50%), Gaps = 20/269 (7%) Query: 20 LKRICSDVEMIPDVV----KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L R + P V+ +Y IF+GGKRLRP+L LA + + + +ACA+E IH Sbjct: 18 LDRYIPSSDAYPSVIHEAMRYSIFAGGKRLRPILVLAATQAVGGNTEKVMPVACAMELIH 77 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 T +L+HDD+ +D+ RRG+ V+G ++LVGD L + AF ++ +T E+ EA Sbjct: 78 TYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALQTLAFELIAQTT--ESFEAD 135 Query: 134 SLVACTL----AEGELRQLS------LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + TL A G + LS+N D+ + ++ + KT LF A++ +++ Sbjct: 136 RVNQVTLEIAKAAGSSGLIGGQVVDILSENRDIDGDTLEYIHRHKTGALFRASIRAGAIL 195 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G + AL Y +G+AFQ+ DD+LD G+ ++GK +G D +N K T P I + Sbjct: 196 GGATVNQLAALTLYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDIKNQKSTYPSIYGIE 255 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFI 272 + +N I + N K F+ Sbjct: 256 EAKRMATEAAAEAVN--AIKIFNHKAEFL 282 >gi|325300424|ref|YP_004260341.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170] gi|324319977|gb|ADY37868.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170] Length = 327 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/229 (35%), Positives = 121/229 (52%), Gaps = 11/229 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 V+Y++ GGKR+RP L L + ++ D H +L A A+E H TLLHDD++D + R Sbjct: 33 VEYVLGIGGKRIRPTLMLLAYNL--FKEDVHAVLSQAMALETYHNFTLLHDDLMDKADRR 90 Query: 92 RGKVAARLVWGNQTSVLVGD--FLLSQAFCM--VIETKSQEALEALSLVACTLAEGELRQ 147 RGK W ++L GD +LS F M + +E S A + EG+ Sbjct: 91 RGKPTVHKQWDENAAILSGDAMVMLSYQFMMKDCPAMYVRPVMEVFSQTALEICEGQQWD 150 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + + DVT +Y+ +I+ KT+VL + AL++ +++ G + Q L G+ +G+AFQL Sbjct: 151 MEFERRQDVTAGEYMEMIRLKTSVLLAGALKIGAILGGASEADAQKLYDLGIRIGLAFQL 210 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG---TKREKNFW 253 DD LD G+ GKNIG D K T +I AF+R TK E W Sbjct: 211 QDDYLDVYGDPKVFGKNIGGDILCNKKTFMLITAFERAGEETKAELQGW 259 >gi|256820671|ref|YP_003141950.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271] gi|256582254|gb|ACU93389.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271] Length = 321 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/252 (32%), Positives = 137/252 (54%), Gaps = 6/252 (2%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP+LTL + + A AIE H +L+HDD++D+++LRRG Sbjct: 31 IQYILNLGGKRIRPLLTLIATDIFGKDYCKALNAATAIEVFHNFSLIHDDIMDNASLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQLSL 150 K W +L GD +L A+ ++ + S QE ++ LS A + EG+ + Sbjct: 91 KPTVHQKWDTNVGILSGDAMLIIAYKLLEDYPSEIFQELVKTLSETALKVCEGQQMDMDF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 K +V+ E Y+ +I KT+VL AAL++ S+I+ + + ++G+NLGIAFQL DD Sbjct: 151 EKLQEVSIEAYMQMISYKTSVLIGAALQMGSIISETTKENQMNMYNFGLNLGIAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRGTKREKNFWKSTINDGKISVENLK 268 LD G+ + GK IG D K T+ + LA +RE+ +N+ + ++ Sbjct: 211 YLDTFGDAS-FGKKIGGDIIENKKTILYLKSLALSNEKQREELLRAYALNEVDNKIARVR 269 Query: 269 KAFIIMRENRAL 280 + F I ++A+ Sbjct: 270 EIFQITNADKAV 281 >gi|296168327|ref|ZP_06850251.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896758|gb|EFG76391.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 332 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/326 (30%), Positives = 168/326 (51%), Gaps = 23/326 (7%) Query: 8 TLKD-MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 T++D + ++ L+ +CS E++ D + +L +GGKR RP+ T+ +A + + V Sbjct: 15 TVRDGVGRIEQLMDTELCSADEVMTDSLTHLFKAGGKRFRPLFTVLSAQIGPNPDAHEVT 74 Query: 67 LACA-IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A IE +H ATL HDDV+D++ +RRG A + WGN ++L GD+L + A +V Sbjct: 75 IAGAVIELVHLATLYHDDVMDEAEVRRGAPTANVRWGNNVAILAGDYLFATASRLV---- 130 Query: 126 SQEALEALSLVACTLAE---GELRQL----SLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 S EA+ L+A T A+ G++R+ ++ D E YL V+ KTA L +AA Sbjct: 131 SLLGPEAVRLIAETFAQLVTGQMRETRGLTGAAEGADPVEH-YLKVVYEKTACLIAAAGR 189 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 ++ +G + L G +G AFQ+ DD++D + +E GK G D R G TLP+ Sbjct: 190 FGAMFSGADAEQVERLSRLGGIVGTAFQISDDIIDIDSDSHESGKLPGTDIREGVHTLPM 249 Query: 239 ILAFQRGTK----REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 + A + + T +D ++ +A ++R + + + +A Sbjct: 250 LYALREPGPAAARLAELLAGPTDDDDAVA-----EALALLRASPGMARAKQTLAECAAQA 304 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320 +D L LPD +++L +VD+ + R Sbjct: 305 RDELALLPDLPGRRALQTLVDYTISR 330 >gi|302418638|ref|XP_003007150.1| decaprenyl-diphosphate synthase subunit 1 [Verticillium albo-atrum VaMs.102] gi|261354752|gb|EEY17180.1| decaprenyl-diphosphate synthase subunit 1 [Verticillium albo-atrum VaMs.102] Length = 451 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/261 (33%), Positives = 135/261 (51%), Gaps = 12/261 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHT++LL DDV+D S RRG +A L + N+ +VL GDFLL +A + + Sbjct: 194 LAEITELIHTSSLLRDDVIDHSVSRRGSPSANLEFSNKMAVLAGDFLLGRASVALARLRD 253 Query: 127 QEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E L+ V L EGE QL + +N ++E YL KTA L S + Sbjct: 254 AEVIELLATVIANLVEGEFMQLKNTAQDERNPAWSQEAVDYYLRKTYLKTASLISKSCRA 313 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+L+ + +A +YG NLG+AFQLVDD+LDY ++GK G D G T P++ Sbjct: 314 SALLGNADAATVEAAYAYGKNLGLAFQLVDDMLDYTRSEKDLGKPAGADLELGLATAPLL 373 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ + + +G ++ +A ++ ++ + T A Y +KA +++ Sbjct: 374 YAWKANPELGALVGRKFEGEGDVA-----RARELVLQSNGIEQTRALAQEYSEKAIEAIS 428 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 PDS K L+E+ LQR Sbjct: 429 GFPDSEAKDGLIEMAMKALQR 449 >gi|227832180|ref|YP_002833887.1| putative polyprenyl diphosphate synthase [Corynebacterium aurimucosum ATCC 700975] gi|262183968|ref|ZP_06043389.1| putative polyprenyl diphosphate synthase [Corynebacterium aurimucosum ATCC 700975] gi|227453196|gb|ACP31949.1| putative polyprenyl diphosphate synthase [Corynebacterium aurimucosum ATCC 700975] Length = 334 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 92/302 (30%), Positives = 154/302 (50%), Gaps = 16/302 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVD 86 + I D V++L +GGKR RPM+ L + E V+ A +E +H ATL HDDV+D Sbjct: 42 DFIKDKVRHLSLAGGKRFRPMMALLASEFGERSQSPEVVKAATVVEMVHVATLYHDDVMD 101 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 ++ RRG +A W N ++L GD LL+ A ++ + + +E + L G++R Sbjct: 102 EAERRRGVDSANFRWTNSVAILAGDALLAHASRLMSQLDTH-TVEHFAETFEELVTGQMR 160 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + + E Y VI+ KTAVL ++A + + AG +AL+ G +G+ FQ Sbjct: 161 ETIGAGEANAVEH-YTAVIREKTAVLIASAGYLGAYHAGAGPEQCEALRQIGAAVGMIFQ 219 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR----GTKREKNFWKSTINDGKI 262 +VDDV+D + E GK G D R G TLPV+ A + G + +D + Sbjct: 220 IVDDVIDIFSDSEESGKTPGTDLREGVFTLPVLYALEEEGEVGDELRALLTGPLEDDASV 279 Query: 263 --SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++E L ++ ++AL D +Y + +D L LP+ + ++L ++ D+ +QR Sbjct: 280 QCAIELLWQSG---GRDKALADVN----AYLRVVEDQLSLLPECTASEALRQLADYTVQR 332 Query: 321 LN 322 + Sbjct: 333 VG 334 >gi|15673324|ref|NP_267498.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. lactis Il1403] gi|12724324|gb|AAK05440.1|AE006366_9 heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. lactis Il1403] gi|326406878|gb|ADZ63949.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. lactis CV56] Length = 319 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 146/296 (49%), Gaps = 23/296 (7%) Query: 34 VKYLIF----SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 VK IF +GGK LRP L + + + LA ++E +HTATL+HDDV+D + Sbjct: 36 VKSAIFDIFDAGGKMLRPAYLLLFSGFTDLSESERLALAASVEMMHTATLVHDDVIDHAD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----LAEGE 144 RRG +G + +V GD+L F V S+ +LE +L L GE Sbjct: 96 TRRGVATLSAKYGPEIAVYAGDYL----FIAVFRLMSEHSLELSNLTKNIGSIERLLGGE 151 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L QL+ NL T +DY+ I KT LF+ + V+ LI+ ++A K GMN+GI+ Sbjct: 152 LGQLNHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNTLTKRAYK-IGMNIGIS 210 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ++DD LDY +GK + ED + G + PV+ A Q E N S + I Sbjct: 211 FQIMDDYLDYASTAQTLGKPVLEDIKQGIYSAPVLFALQ-----ENNALVSEL----IKN 261 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E + + ++ + AL T+ A SY A + + LP ++ + E+ L+R Sbjct: 262 EKFDEVYDFIKTSDALEKTKALAKSYTLSALNLIDKLPKGKNRELIAEITRKLLER 317 >gi|322369459|ref|ZP_08044024.1| Dimethylallyltranstransferase [Haladaptatus paucihalophilus DX253] gi|320551191|gb|EFW92840.1| Dimethylallyltranstransferase [Haladaptatus paucihalophilus DX253] Length = 351 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 166/307 (54%), Gaps = 23/307 (7%) Query: 35 KYLIFSGGKRLRP--MLTLATAL-----MLE-YR------GDNHVLLACA--IEFIHTAT 78 +YL+ +GGKRLRP +L +A AL M E YR G ++A A IE I + T Sbjct: 45 RYLLDAGGKRLRPTVLLLVADALADVEPMSEAYRKFPALDGTELDVMAAAVSIEVIQSFT 104 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE-----ALEAL 133 L+HDD++DD LRRG + + +T++L GD L S+AF +++ET + AL+ L Sbjct: 105 LIHDDIMDDDDLRRGVPSVHRAYDTETAILAGDTLYSKAFEIMLETDATPDRCVTALDVL 164 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + + EG+ ++ + DV ++YL +I++KTAVL+ AA +V +++ G +A Sbjct: 165 ASTCTRICEGQALDVAFEERPDVLPDEYLEMIENKTAVLYGAAAKVPAVLLGADEETTEA 224 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L YG+++G AFQ+ DDVLD +++GK G D K T+ + A +G + + Sbjct: 225 LYRYGIDVGRAFQIQDDVLDLTVPSDKLGKQRGSDLVESKQTIITLHARSQGV--DVDSL 282 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 T + G ++ + +A + ++ +A Q+ KD L LPD+ + L ++ Sbjct: 283 VETDDVGDVTEAEIDEAVQRLEAAGSIEYATEKAQELVQRGKDHLSVLPDNESRYLLEQI 342 Query: 314 VDFCLQR 320 D+ ++R Sbjct: 343 ADYLIER 349 >gi|269218351|ref|ZP_06162205.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212210|gb|EEZ78550.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 848 str. F0332] Length = 316 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/319 (30%), Positives = 157/319 (49%), Gaps = 15/319 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACA 70 ME V + + + D + +L+ +GGKRLRP L L A + G VL A A Sbjct: 1 MEAVERRLGEEVRLDDLQVDPATTHLVGAGGKRLRPALVLLAAELGPRPGAEAVLDSAVA 60 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E H A+L HDDV+DD+ +RRG + + ++GN ++L GD L ++A + + Q Sbjct: 61 VELTHLASLYHDDVMDDAPMRRGVPSVQSLFGNSVAILAGDVLFARASLVTSKLGPQ--- 117 Query: 131 EALSLVACT---LAEGELRQLSLSKNLDVTEED-YLHVIKSKTAVLFSAALEVSSLIAGV 186 A+ L A T L +G+L + ++ V+ D Y+ V++ KT L + + L +G Sbjct: 118 -AVKLHATTFERLCQGQLHE-TIGPRASVSPRDHYIRVLEDKTGSLIATSARYGVLFSGG 175 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + AL YG +G+AFQL DDV+D + GK G D R G T+P +L + G Sbjct: 176 SWELADALAQYGECIGVAFQLADDVIDIESDGAVTGKTPGTDLREGVDTMPTLLLRELGE 235 Query: 247 KREKNFWKSTI----NDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 K + + I ++ +S E L +R + L +T A + +A +S+R L Sbjct: 236 KGALDAEGAAILDLLDNADLSGDEALADVVARLRRHSVLEETREMAQDWVSRAIESIRFL 295 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+ ++ L+ + R Sbjct: 296 PEGEIREELVRFARLTVDR 314 >gi|312899122|ref|ZP_07758500.1| putative geranyltranstransferase [Megasphaera micronuciformis F0359] gi|310619789|gb|EFQ03371.1| putative geranyltranstransferase [Megasphaera micronuciformis F0359] Length = 293 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 84/243 (34%), Positives = 139/243 (57%), Gaps = 16/243 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---DNHVLLACAIEFIH 75 +L+ + + + + Y + +GGKR+RP+L LA +LE G D + LACA+E +H Sbjct: 21 LLQTSTPEFSGLYEAMNYSLNAGGKRIRPVLFLA---VLEAAGTDPDAFLDLACALECVH 77 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA---L 130 + +L+HDD+ +D+ RRGK V+G+ T+VL GD LL+ AF ++ + A L Sbjct: 78 SYSLIHDDLPAMDNDDFRRGKPTNHKVYGDGTAVLAGDGLLTYAFELMAAQSAAPAHKIL 137 Query: 131 EALSLVACTLAEGEL---RQLSLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGV 186 +A+ + A + + L V + ++ +SKT V+F+A +++++L+AGV Sbjct: 138 QAIRIFAHAAGPAGMVGGQYFDLQSEGGVPTRAAMELMHRSKTGVIFTAIVQMAALLAGV 197 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +N +AL +YG LG+AFQ+ DD+LD G EMGK +G D +N K T +L + G Sbjct: 198 RNETMKALTTYGDQLGLAFQITDDILDVVGSEKEMGKPVGSDEKNHKTTYVSLLGVE-GA 256 Query: 247 KRE 249 + E Sbjct: 257 REE 259 >gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215] gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215] Length = 300 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/233 (34%), Positives = 128/233 (54%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ + ++Y + +GGKR+RP+L LA+ + V A AIE IHT +L+HDD+ + Sbjct: 36 EILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSLVAC 138 D+ LRRG+ V+G+ ++L GD LL++AF MV T+ + LSLVA Sbjct: 96 DNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAG 155 Query: 139 T--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L K +D+ +Y+H+ KT L A + ++IAG + QAL Sbjct: 156 APGLVGGQVVDLECEGKEVDLETLEYIHL--HKTGALLKACVRTGAMIAGANEKLLQALT 213 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +Y +G+AFQ++DD+LD ++GK G+D K T P +L + KR Sbjct: 214 TYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLGMEESKKR 266 >gi|227512276|ref|ZP_03942325.1| possible trans-hexaprenyltranstransferase [Lactobacillus buchneri ATCC 11577] gi|227084451|gb|EEI19763.1| possible trans-hexaprenyltranstransferase [Lactobacillus buchneri ATCC 11577] Length = 325 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 153/309 (49%), Gaps = 15/309 (4%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLACAIEFIHTA 77 +LK + + + + L+ SGGK LRP + + D A AIE +H A Sbjct: 23 LLKAVTLSNQPVHSRILALLKSGGKLLRPGFFYIYSEFGENIPADKLRAGAAAIELLHVA 82 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEA 132 TL+HDDV+D S LRRG +G + ++ GD+L + F V++ T Q +EA Sbjct: 83 TLIHDDVIDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLKSTHDATDLQRHIEA 142 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + T+ GEL Q++ + D++++DY H I KTA LF + E S+++ + Sbjct: 143 MQ----TILNGELDQMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAILTHAPRDIVT 198 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-GTKREKN 251 G+ +G A+Q+ DD+LDY G+ ++ K + ED ++G TLP+ILA Q GT+ Sbjct: 199 LGGEIGLAIGQAYQIQDDILDYGGDSSQTKKPVLEDLQSGVYTLPLILANQTAGTQLAPL 258 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 K + ++KK I+ ++ L A QK + LP+ + KK L Sbjct: 259 LGKKQ----DLKEADIKKIQEIVIKSGGLKRAHEIANQLTQKTLALINRLPEQNSKKELR 314 Query: 312 EVVDFCLQR 320 + + LQR Sbjct: 315 RLTNLLLQR 323 >gi|296090181|emb|CBI40000.3| unnamed protein product [Vitis vinifera] Length = 422 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 147/302 (48%), Gaps = 26/302 (8%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALML----------------EYRGD 62 + ++V + +Y G GKR RP +L +ATAL + E R Sbjct: 103 VVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVPLPRPALAEVPETLSTELRTR 162 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + A E IH A+LLHDDV+DD+ RRG + ++ GN+ +VL GDFLLS+A + Sbjct: 163 QQCI-AEITEMIHVASLLHDDVLDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALA 221 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 K+ E + L+ V L GE Q++ + V+ E YL KTA L S + + +L Sbjct: 222 SLKNTEVVSLLATVVEHLVTGETMQMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIAL 281 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AG V YG NLG+AFQL+DDVLD+ G +GK D R+G T P++ A Sbjct: 282 LAGQTAEVSMLAFEYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAI 341 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + + + + N I + A + ++R + T A + A +++ LP Sbjct: 342 EEFPQLDAVVKRGLDNPADIDL-----ALDYLGKSRGIQRTRELAMKHANLAAEAIDSLP 396 Query: 303 DS 304 +S Sbjct: 397 ES 398 >gi|187735758|ref|YP_001877870.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835] gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 297 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 84/267 (31%), Positives = 135/267 (50%), Gaps = 11/267 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I ++Y IF+GGKR+RP+L LA A + ++ ACA+E +HT +L+HDD+ + Sbjct: 33 ETIHKAMRYSIFAGGKRMRPVLCLAAAEACGGLAVDALVPACAVEMMHTYSLIHDDLPAM 92 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D+ LRRGK + +G ++L GD LL++AF ++ + E V A G Sbjct: 93 DNDDLRRGKPTSHKAFGEGVAILAGDALLTEAFAVIAQVDDTERYTVRDYVRELAATGGS 152 Query: 146 RQLSLSKNLDV-------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L + LD+ +E + V + KTA L + AL + A S +AL +G Sbjct: 153 TMLIGGQILDLEGEHKQLSEPEVRTVYEGKTAALLTTALRFGGMSANATESQLEALTDFG 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 NLG+AFQ++DD+LD ++GK G+D + K T P ++ G + E Sbjct: 213 YNLGLAFQVIDDILDLTASTEKLGKTAGKDVNSQKSTCPALIGLD-GARSEAKCRTQAAL 271 Query: 259 DGKISVENLKKAFIIMRENRALVDTEY 285 D + ++A ++ N L++ EY Sbjct: 272 DALMIFPEERRARLVELANY-LLNREY 297 >gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM 16646] gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM 16646] Length = 296 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 125/232 (53%), Gaps = 12/232 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD--VV 85 + I + ++Y F+GGKR+RP+LT+ A + +G+ + AC IE IHT +L+HDD ++ Sbjct: 31 QKIHEAMRYSTFNGGKRIRPVLTMKAAELFGLQGEKVIPTACGIEMIHTYSLIHDDLPIM 90 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC----TLA 141 D+ RRGK V+G+ ++L GD LL+ AF +++ E + +++ + A Sbjct: 91 DNDDFRRGKPTCHKVFGDAIALLAGDALLTLAFNTIVKNAQIEGISMQAVIDVIGRISRA 150 Query: 142 EGELRQLS------LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G L + LS+ + + E+ ++ KT L A+L + +A S L Sbjct: 151 SGSLGMIGGQTVDILSQGVSIDEKTLFYMDYHKTGCLIQASLWAGARLAEAPASDLNKLD 210 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +G +G+ FQ+VDD+LD G+ ++GK +G D RN K T P + ++ K Sbjct: 211 IFGEKIGLIFQIVDDLLDICGDEKKLGKPVGSDVRNKKSTFPSVYGYENSVK 262 >gi|261884869|ref|ZP_06008908.1| polyprenyl synthetase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 243 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 8/211 (3%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 S GK+LR L L A E L+ +E IH A++LHDDV+DDS +RRGK + Sbjct: 28 SSGKKLRSKLILKIAGASE----ASFKLSSVVEIIHLASVLHDDVIDDSLIRRGKPSINA 83 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 ++G + S+++GD L S+ F +++ + A + +S C L+ GEL + L + + +E Sbjct: 84 IFGTKNSIMLGDILYSKGFNEIVKFDMKIA-DIISDAVCKLSIGELMDVELGSSFNADKE 142 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 YL +I KTAVL AA + ++++AG Q YG NLG+AFQ+VDD+LD + Sbjct: 143 KYLKMIYFKTAVLIEAAAKSAAILAGFD---EQKYGDYGKNLGLAFQIVDDILDITSDEK 199 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +GK DF+ GK TLP I +++ +K Sbjct: 200 TLGKPAMNDFKEGKTTLPYIYLYEKLENEDK 230 >gi|156405854|ref|XP_001640946.1| predicted protein [Nematostella vectensis] gi|156228083|gb|EDO48883.1| predicted protein [Nematostella vectensis] Length = 427 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 117/227 (51%), Gaps = 7/227 (3%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLL------ACAIEFIHTA 77 + VE + V Y GK +RP + L A Y + V+L A E IHTA Sbjct: 128 TSVETLQRVSHYYFDGKGKYIRPRIVLLMAAATNYHSHRSRVILHDQETAAMISEMIHTA 187 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +L+HDDV+D + RRGKVA L++G++ +L GD++LS+ + + EA++ L+ + Sbjct: 188 SLIHDDVIDRADTRRGKVAINLMYGDKNCILAGDYILSRVSLAIARFGNVEAVKLLAEIV 247 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L GE QL +N D YL KTA L + + + L+ ++ Y Sbjct: 248 DELVRGEFMQLGSKENPDERFTHYLKKTYKKTASLIACCCKTAVLLGDSPPDIQDIAFQY 307 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G N+GIAFQLVDDVLD+ EMGK D + G T PV+ A ++ Sbjct: 308 GRNVGIAFQLVDDVLDFVSSKQEMGKATAADLKLGLATAPVLFACEK 354 >gi|213409778|ref|XP_002175659.1| decaprenyl-diphosphate synthase subunit 1 [Schizosaccharomyces japonicus yFS275] gi|212003706|gb|EEB09366.1| decaprenyl-diphosphate synthase subunit 1 [Schizosaccharomyces japonicus yFS275] Length = 381 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 103/347 (29%), Positives = 169/347 (48%), Gaps = 47/347 (13%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL------------------- 51 D+++V+ + + + +++ + D Y + GK+LRP L L Sbjct: 43 DLKRVSPGMRRMLGCNLDHLQDASTYYTLAQGKQLRPSLVLLVSRAVSLLNGINRSVASE 102 Query: 52 ------ATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102 AL+L+ GD + + LA E IH A+LLHDDV+D + RRG+V+ + +G Sbjct: 103 RYILDCNPALLLD--GDVLPSQLRLAQITEMIHVASLLHDDVIDLATHRRGQVSGNIAFG 160 Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED-- 160 NQ +V GDF+L++A + ++ E L+ V L GE QL +N+D D Sbjct: 161 NQQAVFAGDFILARASTAMARLRNTRVTELLATVIADLIRGEFLQL---RNVDEKGGDAL 217 Query: 161 ------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 YL KTA L S + ++++ S+ QA+ +G LGIAFQLVDD LD+ Sbjct: 218 QASFDYYLEKSYLKTASLISKSCMAAAVLGKAVPSIVQAIGEFGRCLGIAFQLVDDALDF 277 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274 + ++GK D + G T PV+ A+++ + E + + G I ++A + Sbjct: 278 KSTDGDLGKPANADLKLGLATAPVLFAWKQFPELESAVRSNFQSKGAI-----EQARQYV 332 Query: 275 RENRALVDTEYRAYSYGQKAKDSLRC-LPDSSWKKSLMEVVDFCLQR 320 RE + TE A + KAK L +PDS ++L+++ D + R Sbjct: 333 READGVRKTEAWAGQFIVKAKGLLSSHIPDSPPLQALLDICDRVITR 379 >gi|193214123|ref|YP_001995322.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110] gi|193087600|gb|ACF12875.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110] Length = 335 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 84/288 (29%), Positives = 147/288 (51%), Gaps = 3/288 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GKR+RP+L L A + D+ + LA ++E +H TL+HDD++D++ALR G+ Sbjct: 46 YILTGKGKRVRPVLVLLGAESICGTSDHALNLALSVEVLHNFTLIHDDIMDNAALRHGRE 105 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQLSLSK 152 L W ++L GD +L+ A+ + ++T S + L+ ++ + EG+ + K Sbjct: 106 TVHLKWNENAAILSGDMMLAFAYELALKTNSSRLTKILDVITQSTIVICEGQTYDMDFEK 165 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 DVT +YL +I KT L +A+LE+ L A + L YG +G AFQ+ DD+L Sbjct: 166 RTDVTMSEYLDMISKKTGRLIAASLELGGLAAEATDEQLAILTEYGELIGQAFQVQDDLL 225 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 D + + GK G D GK T ++ A + T + +S I++ I+ E + + Sbjct: 226 DIMADDKKFGKVPGGDLMEGKKTFLLLRALELTTGEDHLLLQSVIDNHGIAQERIPEIKD 285 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I L + + S +KA LP+ + +++L+ ++R Sbjct: 286 IYERCGILNEAQELINSNFEKAVTLSEKLPNEAGREALVGFTAMVMKR 333 >gi|313204536|ref|YP_004043193.1| polyprenyl synthetase [Paludibacter propionicigenes WB4] gi|312443852|gb|ADQ80208.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4] Length = 325 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 14/246 (5%) Query: 19 ILKRICSDVEMIP---------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 I + I S++E I + + Y++ GGKR+RP LTL + + + A Sbjct: 7 ITQLISSEIEQINWSKEPRGLYEPIGYVLSLGGKRIRPALTLMACNLFSDDVQSAMNTAL 66 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-- 127 IE H TLLHDD++D + +RRG+ W + T++L GD + ++ V +T + Sbjct: 67 GIEIFHNFTLLHDDIMDRADVRRGRPTVHKKWDDNTAILSGDVMQIASYQFVTKTPEKYL 126 Query: 128 -EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ S A + EG+ + DV ++YL +I+ KTAVL AAL+ + I G Sbjct: 127 KKTLDLFSKTAAEICEGQQYDVDFESRDDVKADEYLEMIRLKTAVLLGAALQTGAWIGGA 186 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--R 244 Q L +G+N+G+AFQL DD+LD G+ GK IG D K T +I A + + Sbjct: 187 GEEDAQLLYDFGINIGLAFQLKDDLLDVYGDEATFGKKIGGDILCNKKTYLLIHALELAK 246 Query: 245 GTKREK 250 G + E+ Sbjct: 247 GNEAEE 252 >gi|315223793|ref|ZP_07865642.1| polyprenyl synthetase [Capnocytophaga ochracea F0287] gi|314946239|gb|EFS98239.1| polyprenyl synthetase [Capnocytophaga ochracea F0287] Length = 321 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 84/254 (33%), Positives = 140/254 (55%), Gaps = 10/254 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++Y++ GGKR+RP+LTL + +YR + A AIE H +L+HDD++D+++LR Sbjct: 31 IQYILNLGGKRIRPILTLIATNIFGKDYRKALNA--ATAIEVFHNFSLIHDDIMDNASLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQL 148 RGK W +L GD +L A+ ++ + S QE ++ LS A + EG+ + Sbjct: 89 RGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDCPSKIFQELVKTLSETALKVCEGQQMDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 K +V+ E Y+ +I KT+VL AAL++ S+I+ + + ++G+NLGIAFQL Sbjct: 149 DFEKLQEVSIEAYMQMISYKTSVLIGAALQMGSIISETTKENQINMYNFGLNLGIAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRGTKREKNFWKSTINDGKISVEN 266 DD LD G+ + GK IG D K T+ + LA +RE+ T+N+ + Sbjct: 209 DDYLDTFGDAS-FGKKIGGDIIENKKTILYLKSLALSNEKQREELLRAYTLNEVDNKIAR 267 Query: 267 LKKAFIIMRENRAL 280 +++ F ++A+ Sbjct: 268 VREIFQTTNADKAV 281 >gi|189485328|ref|YP_001956269.1| geranyltranstransferase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287287|dbj|BAG13808.1| geranyltranstransferase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 297 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 137/245 (55%), Gaps = 21/245 (8%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L+ +E +N ++ K + D ++ ++Y + +GGKRLRP+L + A + + +N + A Sbjct: 11 LQKVEYINLVLKKFLPKDNSVVSQGMRYSVLAGGKRLRPVLVILAAELFGVKAENVIPAA 70 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 CAIE++HT +L+HDD+ +D+ LRRG A +G ++L GD LL+++F ++ ++KS Sbjct: 71 CAIEYLHTYSLIHDDLPAMDNDDLRRGISANHKKFGEAAAILCGDALLTESFSLITKSKS 130 Query: 127 QEA--LEALSLVACTLAEGELRQLSLSKNLDVTE-------------EDYLHVIKSKTAV 171 E EA+ ++A G + + + D+ E E + KTA Sbjct: 131 SEKNINEAVRILAYY---GGYKGMIAGQTEDILETGKWSKKNKILLGEKIKFIQIQKTAA 187 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L A+L++ +++AG +AL+ YG N GIAFQ+VDD+LD + +GK G D N Sbjct: 188 LMIASLKIGAVLAGADKEGLKALEVYGKNAGIAFQIVDDILDVYADKKLLGKE-GSDAEN 246 Query: 232 GKPTL 236 GK T+ Sbjct: 247 GKLTV 251 >gi|312869707|ref|ZP_07729854.1| polyprenyl synthetase [Lactobacillus oris PB013-T2-3] gi|311094756|gb|EFQ53053.1| polyprenyl synthetase [Lactobacillus oris PB013-T2-3] Length = 327 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 94/316 (29%), Positives = 164/316 (51%), Gaps = 8/316 (2%) Query: 12 MEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVL-L 67 ++ VN I +RI C + E+ ++ + +GGK LRP L L T+ + R D ++ L Sbjct: 15 LKAVNQCIQERIDCQNAELHTALLT-MANNGGKYLRPALLLLTSQIFTPSSRNDERLIKL 73 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KS 126 A +IE +H ATL+HDD++DDS RRG V+ + +G T+V GD L + F +++E + Sbjct: 74 AASIEVLHMATLIHDDIIDDSPERRGAVSIQARFGKDTAVYAGDLLFTVFFDLLLEAIPA 133 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ + + +GEL Q+ NL T +DYL ++ KTA LF A + + A Sbjct: 134 SPYLQVNARAMRQILDGELGQMDQRFNLQQTLDDYLANVRGKTAALFKLAAQEGAYFAAA 193 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + ++G LGIAFQ++DD+LDY G ++ K + ED G +LP+++A + Sbjct: 194 TTEQVASAAAFGQQLGIAFQMLDDILDYTGG-KKLNKPVLEDLATGVYSLPLLMALETPA 252 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ + +++ ++++ + A+ + A + Q A L LP + Sbjct: 253 AAEQ-IKPLLAKERQLTAPDIQRVQQDVIAGGAVEKSRQLATQFTQGALTELTKLPATKA 311 Query: 307 KKSLMEVVDFCLQRLN 322 + L ++ + L+R N Sbjct: 312 RLFLQQMTNRLLKRSN 327 >gi|78187619|ref|YP_375662.1| geranyltranstransferase [Chlorobium luteolum DSM 273] gi|78167521|gb|ABB24619.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Chlorobium luteolum DSM 273] Length = 330 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 84/296 (28%), Positives = 150/296 (50%), Gaps = 15/296 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +Y++ GKR+RP LTL + + +N + +A A+E +H TL+HDD++D++ LR Sbjct: 39 ARYILEGKGKRIRPFLTLLASEAVSGNSENALKVALAVEVLHNFTLMHDDIMDEAELRHN 98 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQLSL 150 + W ++L GD +++ A+ + +E +S E + L+ T+ EG+ + L Sbjct: 99 RPTVHREWNANVAILSGDMMIAYAYELALEAESHRHCELIHILNHANITICEGQALDMEL 158 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + D T DYL +I KT L SAALE + A Q+L +G +G AFQ+ DD Sbjct: 159 EEKQDATIADYLDMISKKTGRLISAALEAGGVSADATREQLQSLVLFGEKIGRAFQIQDD 218 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND---GKISVENL 267 LD E + GK G D NGK T ++ + + + + +S + GK V ++ Sbjct: 219 YLDIMAEDGKSGKMAGGDVINGKKTYLLLRSLELTSGADNELLRSIYMNKGIGKERVPDV 278 Query: 268 KKAFI---IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + F +++E AL++++ ++A +L LP++ + L + ++R Sbjct: 279 RAVFERCGVLKETAALINSDT------EEALQALENLPNAEGRDYLRGFANILMKR 328 >gi|110597592|ref|ZP_01385877.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031] gi|110340712|gb|EAT59189.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031] Length = 366 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/290 (28%), Positives = 145/290 (50%), Gaps = 3/290 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +Y++ GKR+RP LTL + + +N + +A A+E +H TL+HDD++D + LR G Sbjct: 75 ARYILEGKGKRIRPFLTLLASEAVSGSSENALNVALAVEVLHNFTLMHDDIMDQADLRHG 134 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQLSL 150 + L W ++L GD +++ A+ + ++ KS E + L+ T+ EG+ + L Sbjct: 135 RPTVHLEWNVNAAILSGDMMIAYAYELALQAKSSRHAELVHILNDANITICEGQALDMEL 194 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + D T DYL +I KT L SAALE + + ++L +G +G AFQ+ DD Sbjct: 195 EEKKDATIADYLDMIAKKTGRLISAALEAGGVAGNATDEQLRSLVLFGEKIGRAFQIQDD 254 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 LD + + GK G D NGK T ++ + + + RE + S + IS + + + Sbjct: 255 YLDIMADDGKSGKIAGGDVMNGKKTYLLLRSLELTSGREHDLLHSIFMNKGISADRVPEV 314 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I L +T S ++A ++ LP + ++ L + ++R Sbjct: 315 KAIYERCGVLEETVALINSITEEALSAIDSLPYAEGREYLKGFSNILMKR 364 >gi|294778249|ref|ZP_06743675.1| polyprenyl synthetase [Bacteroides vulgatus PC510] gi|294447877|gb|EFG16451.1| polyprenyl synthetase [Bacteroides vulgatus PC510] Length = 325 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 134/245 (54%), Gaps = 6/245 (2%) Query: 12 MEKVN-FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +EKVN +L + + + ++Y++ GGKR+RP+L L + + + D+ + A Sbjct: 9 LEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQAAG 68 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---IETKSQ 127 IE H TLLHDD++D + +RR K VW T++L GD +L A+ ++ E + Sbjct: 69 IETYHNYTLLHDDLMDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCPERYLK 128 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + ++ S A + EG+ + DVT +Y+ +I+ KT+VL SAAL++ +++ G Sbjct: 129 QVMDIFSQTALEICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAALKIGAVLGGAS 188 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRG 245 + L +G+ +G+AFQL DD LD G+ GKNIG D K T +I LA G Sbjct: 189 EDDARKLYDFGIKMGLAFQLQDDYLDVYGDSKVFGKNIGGDILCNKKTFMLINALALADG 248 Query: 246 TKREK 250 +R++ Sbjct: 249 IQRKE 253 >gi|172039945|ref|YP_001799659.1| putative polyprenyl diphosphate synthase [Corynebacterium urealyticum DSM 7109] gi|171851249|emb|CAQ04225.1| putative polyprenyl diphosphate synthase [Corynebacterium urealyticum DSM 7109] Length = 336 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/331 (29%), Positives = 157/331 (47%), Gaps = 25/331 (7%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L D +++ + R+ I D + +L +GGKR R + L L +Y G N Sbjct: 19 LNDRITAGLQEAEDFLRWRLSQGESFITDKISHLALAGGKRFRVVFAL---LAAQY-GKN 74 Query: 64 HVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 A +E H ATL HDDV+D++ RRG +A WGN ++L GD+L F Sbjct: 75 PTARKVRDAAVVVELTHLATLYHDDVMDEADRRRGAESANARWGNSMAILAGDYL----F 130 Query: 119 CMVIETKSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 + E S + A T E G++R+ + + + E Y+ VI+ KT VL ++ Sbjct: 131 AVASEILSGLGAHTVRHFADTFGELVTGQMRETVGAADGEDAIEHYMKVIQEKTGVLIAS 190 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A + +L +G + AL +G ++G FQ+VDD++D + E GK G D R G T Sbjct: 191 AGYLGALHSGAEQEHVDALAQFGRHMGQIFQIVDDIIDIWADPEESGKTPGTDLREGVFT 250 Query: 236 LPVILAFQRGTK---REKNFWKSTINDGKISVENLKKAFIIMREN-RALVDTEYRAYSYG 291 LPV+ A ++ + R + + D + E L+ +I R N R L + + Y Sbjct: 251 LPVLHAMRQEDEVGARLRELLTGPVTDDAVVEECLE---LIQRSNGRELAEQDVEHYR-- 305 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 A + L LPD+ ++L ++ F L RL Sbjct: 306 GLADEELAKLPDNEVTEALRHLLAFSLDRLG 336 >gi|295396390|ref|ZP_06806553.1| decaprenyl diphosphate synthase [Brevibacterium mcbrellneri ATCC 49030] gi|294970759|gb|EFG46671.1| decaprenyl diphosphate synthase [Brevibacterium mcbrellneri ATCC 49030] Length = 345 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 89/290 (30%), Positives = 148/290 (51%), Gaps = 9/290 (3%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 +L+ +GGKR+RPML L + + A A+E +H A+L HDDV+D++ RRG + Sbjct: 58 HLMRAGGKRVRPMLVLLCSQLGGGVSPRVHTAAAAVELVHLASLYHDDVMDEAPKRRGAL 117 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSK 152 +A WGN ++L GD L ++A + +E + EA+ + A T L G+L + + Sbjct: 118 SAHEKWGNNVAILTGDLLFARASQLSLEVGA----EAMRVQAETFERLVLGQLHEFVGTT 173 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 D E YL V+ KT L SA+ + + + + +K YG +G+AFQL DDV+ Sbjct: 174 ESDDPIEHYLSVLADKTGSLISASCQFGVIASDGPAELLPVVKEYGEAVGVAFQLADDVI 233 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-DGKISVE-NLKKA 270 D + + GK G D R G TLPV+LA + +++ + D ++ + L++A Sbjct: 234 DLTVDGKDSGKTPGTDLREGVATLPVLLARKAAQAGDESAAEVVAKVDADLTEDAALEEA 293 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + L T A ++ +A ++L LPD K +L ++R Sbjct: 294 RQALAGHEVLEQTRAEARAWADRAVEALAPLPDGEIKDALATFAYGTVER 343 >gi|152992234|ref|YP_001357955.1| polyprenyl synthetase [Sulfurovum sp. NBC37-1] gi|151424095|dbj|BAF71598.1| polyprenyl synthetase [Sulfurovum sp. NBC37-1] Length = 298 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 123/216 (56%), Gaps = 8/216 (3%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y F GKRLR L L A G + V A +E IH A+LLHDDV+DD+ RR K Sbjct: 25 YAKFPQGKRLRAKLILKIA----GNGLSVVKTAAVVEMIHAASLLHDDVIDDAYTRRSKP 80 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + ++GN+T++++GD L S+ F + S E + +S L+ GEL+ +SLSK + Sbjct: 81 SLNALYGNKTAIMLGDILYSKGF-FELNNISSEVAKIVSNAVTQLSLGELKDVSLSKIFN 139 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 +E YL +I KTA L A+ ++++AG ++A +YG NLG+AFQ++DD+LD Sbjct: 140 TDKEIYLDMIYQKTASLIEASAGAAAVLAG---KPKEAYMTYGRNLGMAFQMIDDLLDIT 196 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + +GK DF GK TLP I ++ + E+ Sbjct: 197 SDAVTLGKPALHDFVEGKTTLPYIYLYEALEQEEQQ 232 >gi|150004490|ref|YP_001299234.1| putative isoprenoid biosynthesis related protein [Bacteroides vulgatus ATCC 8482] gi|149932914|gb|ABR39612.1| putative isoprenoid biosynthesis related protein [Bacteroides vulgatus ATCC 8482] Length = 325 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 134/245 (54%), Gaps = 6/245 (2%) Query: 12 MEKVN-FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +EKVN +L + + + ++Y++ GGKR+RP+L L + + + D+ + A Sbjct: 9 LEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQAAG 68 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---IETKSQ 127 IE H TLLHDD++D + +RR K VW T++L GD +L A+ ++ E + Sbjct: 69 IETYHNYTLLHDDLMDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCPERYLR 128 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + ++ S A + EG+ + DVT +Y+ +I+ KT+VL SAAL++ +++ G Sbjct: 129 QVMDIFSQTALEICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAALKIGAVLGGAS 188 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRG 245 + L +G+ +G+AFQL DD LD G+ GKNIG D K T +I LA G Sbjct: 189 EDDARKLYDFGIKMGLAFQLQDDYLDVYGDSKVFGKNIGGDILCNKKTFMLINALALADG 248 Query: 246 TKREK 250 +R++ Sbjct: 249 IQRKE 253 >gi|297565930|ref|YP_003684902.1| Dimethylallyltranstransferase [Meiothermus silvanus DSM 9946] gi|296850379|gb|ADH63394.1| Dimethylallyltranstransferase [Meiothermus silvanus DSM 9946] Length = 319 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/214 (41%), Positives = 121/214 (56%), Gaps = 3/214 (1%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLH 81 + SDVE I + L+ +GGKR+RP L + L G + + LA A+E +H+ TLLH Sbjct: 25 VRSDVEFIRLIEDDLVTAGGKRVRPQLAFLASRALG--GVPYEMELALAVELLHSTTLLH 82 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DD+VDD+ RRG VAA +GN SVL GD+LLS+ ++ T E + S VA LA Sbjct: 83 DDLVDDAETRRGHVAAFRKYGNAVSVLAGDYLLSRLLYLLSITGRMELVYMFSEVARELA 142 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 E E+ Q ++ D + E Y +I KTA L A E ++++ + RQAL +G+ Sbjct: 143 ESEVLQFQIAALGDYSFEAYERIITGKTASLMRLACEGAAVLGNAPSEWRQALADFGLFY 202 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 G AFQ+ DD LD G +GK IG D R GK T Sbjct: 203 GQAFQMRDDYLDLMGTPETLGKPIGGDVREGKLT 236 >gi|86134740|ref|ZP_01053322.1| polyprenyl synthetase [Polaribacter sp. MED152] gi|85821603|gb|EAQ42750.1| polyprenyl synthetase [Polaribacter sp. MED152] Length = 323 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 156/304 (51%), Gaps = 10/304 (3%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 E +++L K + + + + V Y++ GGKR+RP+LTL A + + + A A+E Sbjct: 9 EFLSYLESKDWVQEPKNLYEPVDYILKLGGKRIRPVLTLMAADIFGADYNKALPAALAVE 68 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEA 129 H TL+HDD++DD+ LRRGK W T++L GD +L A+ K Q+ Sbjct: 69 VFHNFTLVHDDIMDDAPLRRGKATVHEKWDINTAILSGDAMLILAYKYFENYKPEVFQKL 128 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + S A + +G+ + VT ++YL++I KT+VL +AAL++ +++A + Sbjct: 129 AKLFSKTALEVCDGQQLDVDFETRKKVTIDEYLNMICLKTSVLVAAALKMGAIVAESDDK 188 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT---LPVILAFQRGT 246 + +G+NLG+AFQL DD LD G+ GK IG D K T L + + T Sbjct: 189 NADLIYDFGLNLGLAFQLQDDYLDTFGDPETFGKQIGGDIMENKKTFLYLKTLEVADKDT 248 Query: 247 KRE-KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 K++ K F++ + D V + + + M + L+ E Y+ QKA D+L + S Sbjct: 249 KKKLKYFYRKKLKDNGFKVVEVTRIY-QMNDIPYLMSKEIEKYT--QKAFDTLDQMDISE 305 Query: 306 WKKS 309 K+ Sbjct: 306 ANKT 309 >gi|332662624|ref|YP_004445412.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100] gi|332331438|gb|AEE48539.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100] Length = 323 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 80/236 (33%), Positives = 125/236 (52%), Gaps = 4/236 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V Y++ GGKRLRP+L L + + + LA AIE H +L+HDDV+D + LRRG Sbjct: 29 VNYIMELGGKRLRPILALMGYELFKADYRPALPLAYAIEIFHNFSLVHDDVMDAAPLRRG 88 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETKSQEALEALSLVACTLAEGELRQLS 149 + W ++L GD +L A+ ++ + E ++ + VA + EG+ + Sbjct: 89 QATVHTKWNLNAAILSGDVMLIYAYDYLLRLDAPNRIAEIVKVFNRVAREVCEGQQLDID 148 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 DV+ +YL +I+ KT+VL + ALE++ L AG Q L +G N+GIAFQL D Sbjct: 149 FETRSDVSIPEYLRMIELKTSVLIAGALEMAGLAAGASMDDVQHLYEFGRNVGIAFQLQD 208 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 D+LD G+ E+GK IG D K T ++ A + +++ +N +VE Sbjct: 209 DILDTFGDAAEVGKQIGGDIVQNKKTYLILKALELADGPDRDALFELMNTPTTNVE 264 >gi|330971968|gb|EGH72034.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 190 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 109/190 (57%), Gaps = 2/190 (1%) Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ + + Sbjct: 3 LSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPQEQSE 62 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I + G+ + Sbjct: 63 ALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYTMREGSPEQAAL 122 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 + I G +E+L+ + AL T A Y +A L LP S ++ +L+E Sbjct: 123 VRQAIQKG--GLEDLESIRNAVESAGALDYTAQLARDYAARAIACLDALPPSEYRDALVE 180 Query: 313 VVDFCLQRLN 322 + +F + R + Sbjct: 181 LSEFAVARTH 190 >gi|254818358|ref|ZP_05223359.1| GrcC1 [Mycobacterium intracellulare ATCC 13950] Length = 338 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/325 (30%), Positives = 165/325 (50%), Gaps = 21/325 (6%) Query: 8 TLKD-MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 T++D + ++ L+ + S E++ + + +L +GGKR RP+ T+ +A + V Sbjct: 21 TVRDGVGRIEQLMDTELRSADEIMTESLTHLFKAGGKRFRPLFTVLSAQLGPNPDAADVT 80 Query: 67 LACA-IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A IE +H ATL HDDV+D++ +RRG A + WGN ++L GD+L + A +V Sbjct: 81 IAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGDYLFATASRLV---- 136 Query: 126 SQEALEALSLVACTLAE---GELRQL----SLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 S+ EA+ L+A T A+ G++R+ ++ D E YL V+ KTA L +AA Sbjct: 137 SRLGPEAVRLIAETFAQLVTGQMRETRGLTGAAEGADPIEH-YLKVVYEKTACLIAAAGR 195 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 ++ +G + L G +G AFQ+ DD++D + E GK G D R G TLP+ Sbjct: 196 FGAMFSGADADQVERLSRLGGIVGTAFQISDDIIDIDSDSRESGKLPGTDVREGVHTLPM 255 Query: 239 ILAFQRG---TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 + A + R + I+D E + +A ++R + + + Y +A Sbjct: 256 VYALREPGPDAARLRELLVGPIDDD----ETVAEALALLRASEGMAKAKRSLQDYAAQAH 311 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320 L LPD + +L +VD+ + R Sbjct: 312 QELALLPDVPGRHALQTLVDYTISR 336 >gi|125623941|ref|YP_001032424.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. cremoris MG1363] gi|124492749|emb|CAL97704.1| similar to heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. cremoris MG1363] gi|300070715|gb|ADJ60115.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. cremoris NZ9000] Length = 319 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 146/296 (49%), Gaps = 23/296 (7%) Query: 34 VKYLIF----SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 VK IF +GGK LRP L + + + LA ++E +HTATL+HDDV+D + Sbjct: 36 VKSAIFDIFDAGGKMLRPAYLLLFSGFTDLSESERLALAASVEMMHTATLVHDDVIDHAD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----LAEGE 144 RRG +G + +V GD+L F V S+ +LE +L L GE Sbjct: 96 TRRGVATLSAKYGPEIAVYAGDYL----FIAVFRLMSEHSLELSNLTKNIGSIERLLGGE 151 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L QL+ NL T +DY+ I KT LF+ + V+ LI+ ++A K GMN+GI+ Sbjct: 152 LGQLNHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNALTKRAYK-IGMNIGIS 210 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ++DD LDY +GK + ED + G + PV+ A Q E N S + I Sbjct: 211 FQIMDDYLDYASTAQTLGKPVLEDIKQGIYSAPVLFALQ-----ENNALVSEL----IKN 261 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E + + ++ + AL T+ A SY A + + LP ++ + E+ L+R Sbjct: 262 EKFDEVYDFIKTSDALEKTKALAKSYTLSALNLIDKLPKGENRELIAEITRKLLER 317 >gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822] gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822] Length = 307 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/241 (31%), Positives = 128/241 (53%), Gaps = 11/241 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L LAT ++ + + ACA+E IHT +L+HDD+ + Sbjct: 42 EKIYEAMRYSLLAGGKRLRPILCLATCELMGGTIEMAMPTACALEMIHTMSLIHDDLPAM 101 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVA------- 137 D+ RRGK+ V+G ++L GD LLS AF V +T++ + L ++A Sbjct: 102 DNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFEFVATQTRNVPPNQVLQVIARLGRTVG 161 Query: 138 -CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ L LD+T E + KT L ++ +++AG + ++ L Sbjct: 162 AAGLVGGQVLDLESEGKLDITAETLTFIHTHKTGALLETSVLSGAILAGATSEDQRRLSR 221 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y N+G+AFQ++DD+LD E+GK+IG+D + K T P + + + + Sbjct: 222 YAQNIGLAFQIIDDILDITSTQEELGKSIGKDVQAQKATYPSLWGIEESKAQAQKLVDEA 281 Query: 257 I 257 I Sbjct: 282 I 282 >gi|300711100|ref|YP_003736914.1| Dimethylallyltranstransferase [Halalkalicoccus jeotgali B3] gi|299124783|gb|ADJ15122.1| Dimethylallyltranstransferase [Halalkalicoccus jeotgali B3] Length = 347 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 103/330 (31%), Positives = 174/330 (52%), Gaps = 24/330 (7%) Query: 13 EKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATA--------LMLEYR--- 60 E+VN I + + + E + + +YL+ +GGKRLRP + L TA L +YR Sbjct: 18 ERVNRAIEEELPIARPERLYEASRYLLDAGGKRLRPAVLLLTAEALCDVAPLSTDYREFP 77 Query: 61 ---GDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 GD +L A +IE I + TL+HDD++DD LRRG + + +T++L GD L S Sbjct: 78 TLDGDTVDVLRAAVSIETIQSFTLIHDDIMDDDDLRRGVPSVHREYDLETAILAGDTLYS 137 Query: 116 QAFCMVIET-----KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170 +AF +++E+ +S +AL L+ + EG+ + + DV+E +YL +I+ KTA Sbjct: 138 KAFEIMLESGAHPGRSLKALRTLASTCTRICEGQSLDVEFERREDVSESEYLEMIELKTA 197 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 VL+ +A V + + G + +AL YG+++G AFQ+ DDVLD + +GK G D Sbjct: 198 VLYGSATSVPADLLGADDRTVEALYRYGIDIGKAFQIQDDVLDLTVPSDVLGKQRGSDLV 257 Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290 GK TL + A ++G + + T + ++ + A + ++ RA S Sbjct: 258 EGKRTLITLHAREQGV--DVDSLIGTDDPEAVTEREIDDAVSRLEAVGSIEYARERAQSL 315 Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ KD L LP++ + L + D+ ++R Sbjct: 316 VREGKDELAVLPENEARSQLEAIADYLIER 345 >gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803] gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803] Length = 302 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/243 (33%), Positives = 126/243 (51%), Gaps = 15/243 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV- 84 E I + ++Y + +GGKRLRP+L + TA L GD + L ACA+E IHT +L+HDD+ Sbjct: 37 EKIYEAMRYSLLAGGKRLRPILCI-TACEL-CGGDEALALPTACALEMIHTMSLIHDDLP 94 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL---------S 134 +D+ RRGK V+G ++L GD LL+ AF V+ Q +AL + Sbjct: 95 SMDNDDFRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVTHTPQADPQALLQVIARLGRT 154 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + A L G++ L D+T E + KT L A++ +++AG +Q L Sbjct: 155 VGAAGLVGGQVLDLESEGRTDITPETLTFIHTHKTGALLEASVLTGAILAGATGEQQQRL 214 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 Y N+G+AFQ+VDD+LD E+GK G+D + K T P +L + + ++ Sbjct: 215 ARYAQNIGLAFQVVDDILDITATQEELGKTAGKDVKAQKATYPSLLGLEASRAQAQSLID 274 Query: 255 STI 257 I Sbjct: 275 QAI 277 >gi|324505880|gb|ADY42520.1| Decaprenyl-diphosphate synthase subunit 1 [Ascaris suum] Length = 432 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/248 (31%), Positives = 124/248 (50%), Gaps = 16/248 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALML--------------EYRGDNHVLLACAIEFIHTAT 78 + KY GGK RP ++L A E N +A E IHTA+ Sbjct: 131 MAKYYFDQGGKLFRPTVSLLMAHACNQIKPKTPVVESGRETVTANQYKIAVISEMIHTAS 190 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L+HDDV+D+S +RRG +WGN+ +VLVGDF+L++A ++ + ++ + Sbjct: 191 LVHDDVIDESDVRRGSPTVNAIWGNKMAVLVGDFILARATQVLCSIARPNVISVMATIIE 250 Query: 139 TLAEGELRQLSLSKNLDVT--EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L GE Q++ D T + Y+ SKTA LF+ + + ++++A + + + Sbjct: 251 DLVRGEFMQMTTGSETDATLRFDKYMAKTYSKTASLFANSCKSAAMLADIPEANEEIAFE 310 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 YG +LG+AFQLVDD+LD+ MGK D + G T PV+ A Q + + + Sbjct: 311 YGRSLGLAFQLVDDLLDFVSTSAAMGKPTANDLKLGLATAPVLFAAQEHPELNRLISRRF 370 Query: 257 INDGKISV 264 DG ++V Sbjct: 371 SKDGDVNV 378 >gi|254672306|emb|CBA05417.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha275] Length = 186 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 115/189 (60%), Gaps = 14/189 (7%) Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V +++ +ALK YGM Sbjct: 6 IAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGM 65 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++ ND Sbjct: 66 YVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQ-------VAND 118 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KAKD----SLRCLPDSSWKKSLMEV 313 + ++EN +++ + + +V ++ AYS G+ KA D +L LPDS K +++++ Sbjct: 119 VRTALENADRSY-FEKIHDYVVRSDALAYSIGEARKAVDCAVTALDALPDSEVKDAMIQL 177 Query: 314 VDFCLQRLN 322 L R++ Sbjct: 178 AKESLVRVS 186 >gi|313159079|gb|EFR58454.1| putative geranyltranstransferase [Alistipes sp. HGB5] Length = 324 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 76/251 (30%), Positives = 135/251 (53%), Gaps = 4/251 (1%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 N+L ++ E + + Y + GGKRLRPML + + R + A A+E H Sbjct: 14 NYLAQTEFPAEPERLYAPIGYSLAGGGKRLRPMLLMLAHGIFTDRFQAALPAAAAVEVFH 73 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEA 132 TLLHDD++D++A+RRGK + WG ++L GD ++ A+ ++ E ++ L Sbjct: 74 NFTLLHDDIMDNAAVRRGKPSVYAKWGPSVAILSGDAMMICAYRLLSEVPAELLPRILGT 133 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + +A + EG+ + V+ +Y+H+I+ KT+VL + ++ + +++ G + Sbjct: 134 FNTMALEVCEGQQYDMDFESKRKVSVVEYMHMIELKTSVLLAGSITIGAMLGGASEEDCR 193 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+ + + LG+AFQL DD+LD G+ + +GK IG D GK T +I A R + + Sbjct: 194 KLRRFAIELGLAFQLQDDLLDSYGD-DRLGKAIGGDILEGKQTYLMITAMSRADEATREA 252 Query: 253 WKSTINDGKIS 263 ++T D ++S Sbjct: 253 LRTTRLDARLS 263 >gi|310829047|ref|YP_003961404.1| Polyprenyl synthetase [Eubacterium limosum KIST612] gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612] Length = 297 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 96/301 (31%), Positives = 153/301 (50%), Gaps = 28/301 (9%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM-IPDVV----KYLIFSGGKRLRPMLTLATAL 55 MK ++ L+ +++ + +L C D + PD++ KY +F+GGKRLRP+L T Sbjct: 1 MKPFKETLLEKVKETDHELLA--CFDRKFDTPDIIVSAMKYSLFAGGKRLRPILMKETCR 58 Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFL 113 L + LACAIE IHT +L+HDD+ +D+ LRRGK V+G ++L GD L Sbjct: 59 CLGGDSADVKPLACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGENMAILAGDAL 118 Query: 114 LSQAFCMVI------ETKSQEALEALSLVACT-----LAEGELRQLSLSKNLDVTEEDYL 162 L+ A I +K+ ALS +A + + G+ + LS+N + EE Sbjct: 119 LNYAMETAIAGIPVDPSKTFHYTRALSYLAHSSGVNGMIGGQTGDI-LSENEAINEEKMY 177 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 ++ KT L AA+ +A V R AL++Y +G+AFQ+VDD+LD G+ +G Sbjct: 178 YIHAHKTGALLKAAVLCGGFVAKVTGEERDALETYSEKIGLAFQIVDDILDVTGDEKTLG 237 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWK------STINDGKISVENLKKAFIIMRE 276 K +G D +N K T + ++ + +TI+ +E++ K +I RE Sbjct: 238 KPVGSDEKNHKSTFVSLYGMASSQEKIRELENGALDALATIDHDTSFLEDMAK-YICQRE 296 Query: 277 N 277 N Sbjct: 297 N 297 >gi|302688307|ref|XP_003033833.1| hypothetical protein SCHCODRAFT_233425 [Schizophyllum commune H4-8] gi|300107528|gb|EFI98930.1| hypothetical protein SCHCODRAFT_233425 [Schizophyllum commune H4-8] Length = 382 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/310 (30%), Positives = 160/310 (51%), Gaps = 23/310 (7%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GD-----NHVLLACAIEF 73 ++ + + E++ ++ +Y K +RP L L TAL + G+ V LA +E Sbjct: 65 IQDLTTSNELLTEISQYYAKRPSKLMRPRLILLTALAVNASVGERDALPQQVRLAEVVEM 124 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IH +LLHDDV+D+S RRG ++A +GN+ S+L GDF+L +A ++ +A+ + Sbjct: 125 IHVVSLLHDDVIDESDTRRGDMSAPARYGNKNSILAGDFVLGRAMSLIATLGHFDAMREI 184 Query: 134 SLVACTLAEGELRQ----LSLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIA 184 + V TL EGE+ Q ++LS + Y+ I KT LF+ AL +++++ Sbjct: 185 AGVVTTLVEGEIIQAEDSIALSDKARAGQAADQWGSYMERIFLKTGSLFARALRSTAMLS 244 Query: 185 GVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYR-GEVNEMGKNIGE-DFRNGKPTLPVIL 240 G+ + + A+ YG LG+AFQ++DD LD++ V+ GK G D G T PV Sbjct: 245 GLPSDDERVLAVGDYGTELGLAFQIIDDALDFKETPVDSAGKPTGAVDLSLGLITAPVFY 304 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + ++ + E ++ ++RE AL T A + QKA+D+L+ Sbjct: 305 ALEERPNELAPYVLRKCSEPGDTAEVVR----LVRETSALQRTYALAAEHAQKARDALQA 360 Query: 301 LPDSSWKKSL 310 LP + + +L Sbjct: 361 LPSTLARDAL 370 >gi|320536785|ref|ZP_08036784.1| polyprenyl synthetase [Treponema phagedenis F0421] gi|320146361|gb|EFW37978.1| polyprenyl synthetase [Treponema phagedenis F0421] Length = 349 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 93/302 (30%), Positives = 158/302 (52%), Gaps = 11/302 (3%) Query: 12 MEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--- 67 ++KV I +++C +D + ++++L +GGK +RP+ L A + E D+ + Sbjct: 40 LQKVLNCIERQLCFADPNVNESLIEFL-HAGGKLIRPVFFLLFAHLGEETFDSDPAIIET 98 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A A+E +H ATL+HDD++D+S LRRG + + + G +V GD+LL+ F ++ + S Sbjct: 99 AAALELLHMATLVHDDIIDNSPLRRGIASIQNIHGKSIAVYAGDYLLTVFFTLIAKNISD 158 Query: 128 EALEALSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L S + L EGEL Q + N ++T DY +I+ KTA LF + + A Sbjct: 159 KELLVQSAASMQRLLEGELHQYRMKFNPEITVSDYFQIIEGKTAELFYLSCYLGISFAKN 218 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QA K G N+G AFQ++DD+LDY + ++ ED G +LP+ILA + Sbjct: 219 KTYQEQA-KRIGKNIGCAFQIIDDILDYDNLPQKKNIHVREDLAQGVYSLPLILAMEENP 277 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +++K+ + K S E L + + + + + A Y + A ++ LPD Sbjct: 278 ----DYFKNNPHPDKKSQEYLAYIADGVEKLQGVQKAQAYAKKYSEAALKDIQELPDGIT 333 Query: 307 KK 308 KK Sbjct: 334 KK 335 >gi|167043297|gb|ABZ08002.1| putative polyprenyl synthetase [uncultured marine crenarchaeote HF4000_ANIW141M18] Length = 283 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/177 (37%), Positives = 106/177 (59%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGKR+RP++ L ++ + DN + ACAIEF+HT +++HDD++D+ LRR K + Sbjct: 48 GGKRIRPIILLLSSECVGEIDDNTLAAACAIEFLHTESVIHDDIIDNETLRRQKDPFHIK 107 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G SVL GDF+L + + + L+ A ++EGE+ + L + DVT +D Sbjct: 108 YGYNISVLTGDFVLGLILNIASRINNPRVTKNLATTAMMMSEGEVIESRLEASEDVTFDD 167 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 YL VI+ KTA F A + ++I+ ++L YG N+GIA+Q+ DD+LD++ E Sbjct: 168 YLKVIEYKTATAFETASRLGAIISEGTEEEIESLADYGKNIGIAYQIRDDLLDWQNE 224 >gi|225685204|gb|EEH23488.1| prenyl transferase [Paracoccidioides brasiliensis Pb03] Length = 450 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 114/201 (56%), Gaps = 18/201 (8%) Query: 58 EYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112 + +GD ++L LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDF Sbjct: 229 QVQGDGNILPSQRRLAEITEVIHTASLLHDDVIDNAVTRRSSVSANLEFGNKMAVLAGDF 288 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED----------YL 162 LL +A + + E +E ++ V L EGE QL +N ++ EE+ YL Sbjct: 289 LLGRASVALARLRDPEVIELVATVIANLIEGEFMQL---RNTELDEENPFFTEEAIAYYL 345 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 K+A L S + ++L+ V +A SYG NLG+AFQLVDD+LDY E+G Sbjct: 346 QKTYLKSASLISKSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLDYTISGEELG 405 Query: 223 KNIGEDFRNGKPTLPVILAFQ 243 K G D + G T P++ A++ Sbjct: 406 KPAGADLKLGLATAPLLFAWR 426 >gi|73662585|ref|YP_301366.1| heptaprenyl diphosphate syntase component II [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495100|dbj|BAE18421.1| putative heptaprenyl diphosphate syntase component II [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 317 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 122/234 (52%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +++K+ + + I S +++ +L SGGKR+RP + ++ + ++ +A Sbjct: 9 EIKKIEKRLEQSIKSHDKVLEAASHHLFSSGGKRVRPAFVILSSQFGKEMNEDVYRVAVT 68 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH ATL+HDDV+D S RRG + W T++L G+FLL++ + ++ Sbjct: 69 LELIHMATLVHDDVIDKSDKRRGSLTISKKWDQNTAILTGNFLLARGLEHISNIEANRVH 128 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +S + GEL Q N T +YL I KTA+L + EV ++ +G Sbjct: 129 AVISRAIVEVCMGELYQFQDQFNGHQTITNYLRRINRKTALLIQLSTEVGAITSGADAKT 188 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LK G +G++FQ+VDD+LD+ ++GK +G D NG TLPV+ ++ Sbjct: 189 VHNLKMIGHYIGMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHLTLPVLFEMRK 242 >gi|224419075|ref|ZP_03657081.1| polyprenyl synthetase ) [Helicobacter canadensis MIT 98-5491] gi|253828013|ref|ZP_04870898.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491] gi|313142585|ref|ZP_07804778.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491] gi|253511419|gb|EES90078.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491] gi|313131616|gb|EFR49233.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491] Length = 306 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/244 (33%), Positives = 130/244 (53%), Gaps = 16/244 (6%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK LR L L A D +LL IE I A+LLHDDV+D++ RR + + + Sbjct: 33 GKMLRSKLALNIA----GESDECILLCAIIEMIQNASLLHDDVIDNATTRRSQPSINAIA 88 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT----LAEGELRQLSLSKNLDVT 157 G++ ++++GD L S+AFC + + QE+ + + LA GE+ + L+K + Sbjct: 89 GDKNAIMLGDVLYSKAFCEL--SDFQESFPMIPRIVSNAVTLLAIGEMEDVELAKQFNAN 146 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E YL +I+ KTA L + ++ +AG + + YG NLGIAFQ++DDVLD Sbjct: 147 EAKYLKMIEHKTASLIESTAYAAAFLAGRNQEEAKDFRVYGRNLGIAFQIIDDVLDITAN 206 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQR----GTKREKNFWKSTIN--DGKISVENLKKAF 271 +GK I DF+ GK TLP I + KR +N +K ++ + + ++NLK++ Sbjct: 207 EKMLGKPILSDFKEGKVTLPYIYLYHSLNGLEKKRLENAFKKELSKEEQEWILQNLKESG 266 Query: 272 IIMR 275 I + Sbjct: 267 AIQK 270 >gi|167754003|ref|ZP_02426130.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216] gi|167658628|gb|EDS02758.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216] Length = 337 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 4/233 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y + GKRLRPML + T + + + A A+E H TLLHDD++D++A+RRG Sbjct: 45 ISYSLTMSGKRLRPMLLMLTCGIFSDQPQAAMPAAAAVEVFHNFTLLHDDIMDNAAMRRG 104 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQLSL 150 + WG ++L GD +L A+ ++ E Q + L + +A + EG+ + Sbjct: 105 NPSVFAKWGQNVAILSGDAMLISAYRLLSEYPPQVLPQILARFNTMAIEVCEGQQYDMDF 164 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 V+ E+YLH+I+ KT+ L S A + ++I G Q L + LG+AFQL DD Sbjct: 165 ETRESVSVEEYLHMIELKTSALLSGATVIGAIIGGAGEEDCQRLYRFATELGLAFQLQDD 224 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 +LD G+ +GK IG D GK T +++A + + E ST +D +S Sbjct: 225 LLDSYGD-ERLGKAIGGDILEGKKTYLMVMALSKASAAEHRILASTYSDPTLS 276 >gi|268679951|ref|YP_003304382.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268617982|gb|ACZ12347.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 298 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 167/311 (53%), Gaps = 27/311 (8%) Query: 12 MEKVNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 +EKV L+++ + S VE++ V K GKRLR L L A + E + Sbjct: 2 LEKVENLMVEMVASLGDVRSVELLHRVPK------GKRLRAKLILKIAGVSEAS----LK 51 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IH A+LLHDDV+DD+ RRG+ + ++GN+T++++GD L S+ F + Sbjct: 52 LAAIVELIHAASLLHDDVIDDAFTRRGESSINALFGNKTAIMLGDILYSKGFSELTHM-P 110 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 QE +S L+ GEL + LS + +E Y +I KTA L A+ + ++L++G Sbjct: 111 QEVAFTISNAVALLSVGELLDVDLSHGFNESETLYFDMIYKKTASLIEASAKAAALLSG- 169 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +N AL YG NLG+AFQ++DD+LD +GK DF+ GK TLP + + + T Sbjct: 170 KNGDIYAL--YGKNLGLAFQIIDDILDITQSSEVLGKPSLNDFKEGKTTLPYLYMYHKLT 227 Query: 247 KREKNFWKSTINDGKISVENLKKAFI--IMRENRALVDTEYRAYSYGQKAKDSLRCLPD- 303 ++ + S ++ + + + A+I M E AL+D A + G +A D+++ D Sbjct: 228 PEDQTYLCSLF---QVELTDEQSAWIKAKMHETDALMDAIAYAKALGLEALDAIKDEDDV 284 Query: 304 --SSWKKSLME 312 SS K ++E Sbjct: 285 GLSSIMKEMIE 295 >gi|300779369|ref|ZP_07089227.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC 35910] gi|300504879|gb|EFK36019.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC 35910] Length = 323 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/303 (31%), Positives = 150/303 (49%), Gaps = 28/303 (9%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y+I GGKRLRP++ L M + A AIEF H TL+HDD++D++ LRR Sbjct: 31 MNYIISHGGKRLRPIMVLMACEMFGGDLKEAIKPALAIEFFHNFTLIHDDIMDEAPLRRN 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---------LAEGE 144 K + G +L GD L+ +A+ K E LE AC L EG+ Sbjct: 91 KPTIHTLHGLNVGILSGDGLMLKAY------KFFEDLEPEIFKACIRIFTHTGLLLCEGQ 144 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 ++ DVT +DY+ +I KT VL +++ E+ +LIA +A+ ++G ++GIA Sbjct: 145 QYDINFETQKDVTFDDYIRMITYKTGVLSASSFEIGALIAKADFKDAKAIFNFGKHIGIA 204 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFWKSTINDGK 261 FQ++DD LD G+ + GK D K T+ +LA + T E+ ++W S + Sbjct: 205 FQIMDDYLDVFGDQAQFGKKHAGDIYENKKTVLYLLAREHATDEERKELDYWYSKKTENV 264 Query: 262 ISVENLKKAFIIMR-ENRALVDTEYR---AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 V ++K F + + +AL E SY QK +P+ KK +E+ ++ Sbjct: 265 DKVYGVEKIFRRTKVDEKALRLIEKHNEIGQSYLQKID-----VPEEK-KKPFIELANYL 318 Query: 318 LQR 320 L+R Sbjct: 319 LRR 321 >gi|300770896|ref|ZP_07080773.1| possible geranyltranstransferase [Sphingobacterium spiritivorum ATCC 33861] gi|300762169|gb|EFK58988.1| possible geranyltranstransferase [Sphingobacterium spiritivorum ATCC 33861] Length = 325 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 4/212 (1%) Query: 32 DVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 D ++Y++ GK++RP+LTL A L E + V A AIE+ H +L+HDD++D + L Sbjct: 29 DPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAALAIEYFHNFSLIHDDIMDKAPL 88 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL---VACTLAEGELRQ 147 RRG++ W + ++L GD LL +A+ V + + L+ L+ VA + EG+ Sbjct: 89 RRGQLTVHEKWDDSVAILSGDGLLVKAYEQVAKCPKENLLDLLTTFNKVATEVCEGQQLD 148 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + VTE YLH+I+ KT+VL AL + ++I ++ + +G+N+GIAFQL Sbjct: 149 MDFESLNQVTEAQYLHMIRLKTSVLLGGALRMGAIIGQASVEQQELIYDFGVNVGIAFQL 208 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 DD+LD G+ GK +G D K T +I Sbjct: 209 QDDILDVYGDPETFGKQVGGDIIANKKTFLLI 240 >gi|168001212|ref|XP_001753309.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695595|gb|EDQ81938.1| predicted protein [Physcomitrella patens subsp. patens] Length = 317 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 154/299 (51%), Gaps = 28/299 (9%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRPM--LTLATALMLEYRGDNHVL------------ 66 + ++V ++ +Y G GKR RPM L ++T+LM +H L Sbjct: 2 VTAEVPVLAMAAEYFFKLGVEGKRFRPMVLLLMSTSLM---TSPSHGLQDLIFDDLRLRQ 58 Query: 67 --LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +A E IH A+LLHDDV+D + RRG + V GN+ +VL GDFLL++A + Sbjct: 59 QRIAEITEMIHVASLLHDDVLDHADTRRGISSLNHVMGNKLAVLAGDFLLARASVALASL 118 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED-YLHVIKSKTAVLFSAALEVSSLI 183 ++ E +E LS V L GE+ QLS+ ++ D++ D Y+ KTA L + + + +++ Sbjct: 119 RNTEVVELLSQVLEHLVTGEIMQLSV-EDKDMSNMDYYMQKTFYKTASLMANSCKAIAVL 177 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V +YG +LG+A+QLVDD LDY G +GK D G T PV+ A + Sbjct: 178 AGQPEDVALLAFNYGRHLGLAYQLVDDALDYTGTTKTLGKPALSDLGQGIVTAPVLFALK 237 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + K I +V ++ +A +++E+R + T A + +KA D++ LP Sbjct: 238 EFPEMSK-----LIQRKFKTVTDINQAVEMVKESRGIAQTHALAAEHARKAVDAIANLP 291 >gi|284165809|ref|YP_003404088.1| dimethylallyltranstransferase [Haloterrigena turkmenica DSM 5511] gi|284015464|gb|ADB61415.1| Dimethylallyltranstransferase [Haloterrigena turkmenica DSM 5511] Length = 349 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 105/338 (31%), Positives = 180/338 (53%), Gaps = 40/338 (11%) Query: 13 EKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRP--MLTLATALM------LEYR--- 60 E+VN I + + E + + +YL+ +GGKRLRP +LT+A +L+ +YR Sbjct: 20 ERVNEAIPEELPIQRPERLYEASRYLLDAGGKRLRPTVLLTVAESLLDVEPLSTDYREFP 79 Query: 61 --GDNHVLL---ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 N + + A ++E I + TL+HDD++DD LRRG A + +T++L GD L S Sbjct: 80 TLNGNRIDIMDAAVSVEVIQSFTLIHDDIMDDDDLRRGVPAVHKEYDLETAILAGDTLYS 139 Query: 116 QAFCMVIET--KSQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170 +AF +++ET K ++EAL+++A T + EG+ ++ + DV+ E+YL +++ KTA Sbjct: 140 KAFEIMLETGAKPDRSVEALNVLATTCTKICEGQSLDVTFEERADVSPEEYLEMVEQKTA 199 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 VL++A+ + +++ G AL YG+++G AFQ+ DDVLD ++GK G D Sbjct: 200 VLYAASACLPAILLGADEETIDALYGYGLDIGRAFQIQDDVLDLTVPSEQLGKQRGSDLV 259 Query: 231 NGKPTLPVILAFQRG--------TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282 K TL + A +G T + ++ I+D +V L+ A I N Sbjct: 260 ENKQTLITVHARDQGVDVDNLVDTNDVEAVTEAEIDD---AVAELQAAGSIEYANTT--- 313 Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A + K+ L LPD+ ++ L ++ D+ ++R Sbjct: 314 ----AQDLVAQGKERLEVLPDNEARELLRDIADYLIER 347 >gi|185813044|gb|ACC77966.1| geranyl pyrophosphate synthase [Catharanthus roseus] Length = 420 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 147/300 (49%), Gaps = 26/300 (8%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATA----------------LMLEYRGD 62 + ++V + +Y G GKR RP +L +ATA L E R Sbjct: 101 VVAEVPKLASAAEYFFKLGVEGKRFRPTVLLLMATAIDAPISRTPPDTSLDTLSTELRLR 160 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + A + IH A+LLHDDV+DD+ RRG + V GN+ +VL GDFLLS+A + Sbjct: 161 QQTI-AEITKMIHVASLLHDDVLDDAETRRGIGSLNFVMGNKLAVLAGDFLLSRACVALA 219 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 K+ E + L+ V L GE Q++ + + + E Y+ TA L S + + +L Sbjct: 220 SLKNTEVVSLLATVVEHLVTGETMQMTTTSDQRCSMEYYMQKTYYMTASLISNSCKAIAL 279 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AG + V YG NLG+AFQL+DDVLD+ G +GK D R+G T P++ A Sbjct: 280 LAGQTSEVAMLAYEYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAI 339 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + E ++ +++G + N+ A + ++R + T A + A D++ LP Sbjct: 340 E-----EFPELRAVVDEGFENPYNVDLALHYLGKSRGIQRTRELAIKHANLASDAIDSLP 394 >gi|240169241|ref|ZP_04747900.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium kansasii ATCC 12478] Length = 335 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 159/305 (52%), Gaps = 18/305 (5%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHTATLLHD 82 +DV MI D + +L +GGKR RP+ T+ +A + V++A A+ E IH ATL HD Sbjct: 39 SADVVMI-DSLLHLFKAGGKRFRPLFTVLSAQVGPDPEAEEVIIAGAVVELIHLATLYHD 97 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D++ +RRG +A WGN ++L GD+LL+ A +V S+ A+ +VA T A Sbjct: 98 DVMDEAEVRRGAPSANARWGNNVAILAGDYLLATASRLV----SRLGPAAVRIVADTFAA 153 Query: 143 ---GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++R+ + D+ E+ YL V+ KT L AA ++ +G + L G Sbjct: 154 LVTGQMRETRGAPEGADLIEQ-YLTVVHEKTGSLIGAAGRFGAMFSGADGDQVERLSRLG 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ---RGTKREKNFWKS 255 +G AFQ+ DD++D E +E GK G D R G TLP++ A + R + Sbjct: 213 GIVGTAFQIADDIIDIDSESDESGKVPGTDLREGVRTLPMLYALRDTGPDGARLRALLAG 272 Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 I+D +E A ++R + + + Y +A+D L LPD + +++L +VD Sbjct: 273 PIHDDDAVLE----ALALLRASPGMAKAKDVLAKYAAQARDELDLLPDVAGRRALAALVD 328 Query: 316 FCLQR 320 + + R Sbjct: 329 YTVSR 333 >gi|126662951|ref|ZP_01733949.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38] gi|126624609|gb|EAZ95299.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38] Length = 324 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 117/220 (53%), Gaps = 3/220 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP+LTL + + + V A AIE H +L+HDD++DD+ LRRG Sbjct: 31 IEYILSLGGKRMRPVLTLMASEVFNVDCEKAVPAATAIEVFHNFSLIHDDIMDDAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEAL-SLVACTLAEGELRQLSL 150 W T +L GD +L+ F E K+ + L L S A + EG+ + Sbjct: 91 NQTVHEKWDLNTGILSGDAMLILAYQFFENYEPKTFQKLAKLFSKTALEVCEGQQYDVDF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DVT +YL +I+ KTAVL AA+++ +++A + + +G+NLGIAFQL DD Sbjct: 151 ETRDDVTIPEYLKMIEYKTAVLVGAAMKMGAIVAETSDENADLIYDFGLNLGIAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LD G GK +G D K T + A + + +K Sbjct: 211 YLDAFGNPETFGKQVGGDIIENKKTYLYLKAMEFANEEDK 250 >gi|331701966|ref|YP_004398925.1| trans-hexaprenyltranstransferase [Lactobacillus buchneri NRRL B-30929] gi|329129309|gb|AEB73862.1| Trans-hexaprenyltranstransferase [Lactobacillus buchneri NRRL B-30929] Length = 325 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 119/219 (54%), Gaps = 2/219 (0%) Query: 34 VKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 + L+ SGGK LRP + + E A A+E +H ATL+HDDV+D+S +RR Sbjct: 38 ISQLLKSGGKFLRPGFFYIYSEFGQEVDPAKIKAGAAAVELLHVATLIHDDVIDESPIRR 97 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-TLAEGELRQLSLS 151 G +G + ++ GD+L + F V+++ A + A T+ GEL Q+ + Sbjct: 98 GIETIHTEYGQKNAIYAGDYLFTCYFTQVLKSTQDPANMKRHVDAMQTILAGELDQMKYN 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 N +TE DY H I KTA LF + S+L++ + + + G+ +G A+Q++DD+ Sbjct: 158 FNQQMTEADYFHEITGKTAELFRLCFQQSALVSQASDQIFKLGGEIGLTIGQAYQILDDI 217 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LDY G+ ++ K + ED ++G TLP+I A Q K+ K Sbjct: 218 LDYSGDPHQTKKPVLEDLKSGVYTLPLIFALQTAQKQLK 256 >gi|325567804|ref|ZP_08144387.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC 12755] gi|325158495|gb|EGC70643.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC 12755] Length = 339 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 93/293 (31%), Positives = 151/293 (51%), Gaps = 13/293 (4%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNH----VLLACAIEFIHTATLLHDDVVDDSALRR 92 +I SGGK LRP L L Y D V LA +IE +HTA+L+HDD+VD + RR Sbjct: 53 MIHSGGKLLRPAYQL---LFSAYGSDKDREKAVALAASIEMLHTASLIHDDIVDHADTRR 109 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACTLAEGELRQLSLS 151 R +GN +V GD+L F ++ + S ++L+ S + GEL Q+S Sbjct: 110 KLPTIRSEFGNDVAVYAGDYLFVCCFKLMADYASSMKSLQMNSRSMEKILAGELGQMSKR 169 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 +L VT EDYL I+ KTA LF+ + + + +G + G +G+AFQ++DDV Sbjct: 170 YDLSVTVEDYLENIRGKTAELFALSCFIGAYESGTSLRFANQAREIGEAIGLAFQIMDDV 229 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LDY + +GK + ED R G +LP+++A + + R++ D + + + Sbjct: 230 LDYSQDATALGKPVLEDVRQGVYSLPLLMALK--SDRQQLLPLLEKQDAMTDTDT-HEVY 286 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVDFCLQRLN 322 I++E+ + + + A Y +KA +++ LP++ K L ++ L R N Sbjct: 287 RIVQESAGIEEAKKLAADYTKKALQAIQKLPETKDETKTYLYQITAQILGRQN 339 >gi|307194127|gb|EFN76575.1| Decaprenyl-diphosphate synthase subunit 1 [Harpegnathos saltator] Length = 337 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 85/300 (28%), Positives = 148/300 (49%), Gaps = 12/300 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL------LACAIEFIHTATLLH 81 E+ P + Y + GK LRPML++ A ++ Y + VL +A E IH A+LLH Sbjct: 43 ELQP-IATYYMDGQGKALRPMLSILMARVINYHKGSDVLSYSQRRIAMISEMIHVASLLH 101 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DDV+D S RRGK + ++W + + GD++L+ A M+ ++ + ++ + L Sbjct: 102 DDVIDQSDSRRGKPSVNIIWSQKKVAMAGDYILAVAGTMLARIQNDDVTIVINQIITDLV 161 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 +GE QL + + Y KTA L + + + +A V + + + YG N+ Sbjct: 162 QGEFMQLGSKETENERFAHYFTKTYLKTASLMANCSKAVATLAEVDDRMVEMAYQYGRNV 221 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G+AFQLVDD LD+ +GK G D + G T PV+ A ++ + + G Sbjct: 222 GLAFQLVDDFLDFVASSEAIGKPAGADLKLGLATAPVLFACEQYPELNAMIMRRFQEPG- 280 Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +++KAF ++ ++ L T++ A + +A + S ++K+L + D L R+ Sbjct: 281 ----DVEKAFDLVHKSNGLQQTKFMAKKHCVEAIRIAQSFAKSPYQKALTVLADLVLNRM 336 >gi|260203719|ref|ZP_05771210.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis K85] gi|289573154|ref|ZP_06453381.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis K85] gi|289537585|gb|EFD42163.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis K85] Length = 335 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 92/301 (30%), Positives = 160/301 (53%), Gaps = 17/301 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 E++ D + +L +GGKR RP+ T+ +A + + + IE IH ATL HDDV+D Sbjct: 42 EVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMD 101 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---G 143 ++ +RRG +A WGN ++L GD+LL+ A +V ++ EA+ ++A T+A+ G Sbjct: 102 EAQVRRGAPSANAQWGNNVAILAGDYLLATASRLV----ARLGPEAVRIIADTVAQLVTG 157 Query: 144 ELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 ++R+ S+N+D E+ YL V++ KT L AA + + +G + + L G +G Sbjct: 158 QMRETRGTSENVDSIEQ-YLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVG 216 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK---REKNFWKSTIND 259 AFQ+ DD++D E +E GK G D R G TLP++ A + R + ++D Sbjct: 217 TAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRALLNGPVDD 276 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 +++A ++R + + + Y +A+ L LPD +++L +VD+ + Sbjct: 277 DA----EVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALVDYTVS 332 Query: 320 R 320 R Sbjct: 333 R 333 >gi|254882776|ref|ZP_05255486.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643916|ref|ZP_07998491.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A] gi|254835569|gb|EET15878.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317384440|gb|EFV65407.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A] Length = 325 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 134/245 (54%), Gaps = 6/245 (2%) Query: 12 MEKVN-FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +EKVN +L + + + ++Y++ GGKR+RP+L L + + + D+ + A Sbjct: 9 LEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQAAG 68 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---IETKSQ 127 IE H TLLHDD++D + +RR K VW T++L GD +L A+ ++ E + Sbjct: 69 IETYHNYTLLHDDLMDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCPERYLK 128 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + ++ S A + EG+ + DVT +Y+ +I+ KT+VL SAAL++ +++ G Sbjct: 129 QVMDIFSQTALEICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAALKIGAVLGGGS 188 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRG 245 + L +G+ +G+AFQL DD LD G+ GKNIG D K T +I LA G Sbjct: 189 EDDARKLYDFGIKMGLAFQLQDDYLDVYGDSKVFGKNIGGDILCNKKTFMLINALALADG 248 Query: 246 TKREK 250 +R++ Sbjct: 249 IQRKE 253 >gi|332983459|ref|YP_004464900.1| polyprenyl synthetase [Mahella australiensis 50-1 BON] gi|332701137|gb|AEE98078.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON] Length = 323 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 83/275 (30%), Positives = 139/275 (50%), Gaps = 4/275 (1%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 +F+GGKR+RP L L + + + + A A E IHTA+L+HDD++D S RR Sbjct: 41 LFNGGKRIRPRLVLLSGMCFGELDEKMIHAAVAAELIHTASLVHDDIIDMSDYRRNNPTI 100 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 + GN +VL GDFL ++AF ++ E + ++ + GE+ Q ++ VT Sbjct: 101 NSISGNHVAVLAGDFLFAKAFEILSEHELINSMLYFVNAIQNMCSGEIVQSYRRFDIRVT 160 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+DY+ I KTA L A + AG + + S+G +G AFQ+ DD+LD G Sbjct: 161 EQDYMDYIDKKTASLICACCMAGAQSAGAGSHEINLMGSFGYKIGRAFQITDDILDVTGN 220 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 +GK++ +D G +LP I ++ + +N ++ E+LK+ I Sbjct: 221 KKTLGKSVAQDITEGDISLPFIYLLAESDNSDR--YADKLNKESLN-EDLKQILINEAIC 277 Query: 278 RALVD-TEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 VD + +A Y +A + L +P S ++++L+ Sbjct: 278 SGAVDKAQSKARQYVDEAVELLYEIPYSIYRQALI 312 >gi|315442465|ref|YP_004075344.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] gi|315260768|gb|ADT97509.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] Length = 329 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 90/296 (30%), Positives = 154/296 (52%), Gaps = 9/296 (3%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDD 87 ++ + V +L +GGKR RP+ T+ +A + V +A A IE +H ATL HDDV+D+ Sbjct: 37 LMSEAVNHLFQAGGKRFRPLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDVMDE 96 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA---EGE 144 + +RRG +A WGN ++L GD+L F S+ EA+ ++A T A G+ Sbjct: 97 AQVRRGAPSANARWGNNIAILAGDYL----FATASRLTSRLGPEAVRIIADTFALLVTGQ 152 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 +R+ + + + + YL V+ KTA L SA+ + +G + + L G +G A Sbjct: 153 MRETRGAADQVDSVDHYLKVVYEKTACLISASGRFGATFSGSDEAQIERLAKLGGIVGTA 212 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD++D + +E GK G D R G TLPV+ A R T + + + + Sbjct: 213 FQISDDIIDIDSDADESGKVPGTDLREGVHTLPVLYAL-RETGPDADRLRELLAGPVTDD 271 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ +A ++R ++ + + Y Q+A+ L LPD +++L +VD+ + R Sbjct: 272 ADVAEALRLLRGSQGIRKAKETVIGYAQEAQRELDQLPDVPGRQALASLVDYTVNR 327 >gi|293376580|ref|ZP_06622808.1| geranyltranstransferase [Turicibacter sanguinis PC909] gi|325839379|ref|ZP_08166818.1| geranyltranstransferase [Turicibacter sp. HGF1] gi|292644806|gb|EFF62888.1| geranyltranstransferase [Turicibacter sanguinis PC909] gi|325490499|gb|EGC92815.1| geranyltranstransferase [Turicibacter sp. HGF1] Length = 291 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 144/276 (52%), Gaps = 32/276 (11%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLAT--ALMLEYRGDN 63 K EKV F +++ E IP +K Y + GGKRLRP+L A + L + Sbjct: 11 KPFEKVMFDLIES-----EPIPSELKESMLYSLKVGGKRLRPILLFAVLESFNLAPQKGY 65 Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 HV A A+E IHT +L+HDD+ +DD ALRRGK +V+G T++L GD LL+ AF ++ Sbjct: 66 HV--AAALEMIHTYSLIHDDLPAMDDDALRRGKPTNHIVFGEATAILAGDSLLTHAFKVI 123 Query: 122 IETKSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAV 171 E + + LSL+ A +LA G + ++ + LD+ E +HV +KT Sbjct: 124 AEDERLTTNQRLSLIQALSLASGPMGMVA-GQVLDMEAEVKAVSLEQLKQIHV--NKTGR 180 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L A+ ++IA + V LK + +LG+AFQ+ DD+LD G +GKN+G D N Sbjct: 181 LIEFAIVAGAIIAQADDEVINQLKQFAYHLGLAFQIKDDILDVEGSTAVLGKNVGSDLVN 240 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 GK T + + KN + I K+ + NL Sbjct: 241 GKSTYVSLTSLTEA----KNMLEEEIKCAKVILHNL 272 >gi|158288633|ref|XP_565746.3| AGAP000591-PA [Anopheles gambiae str. PEST] gi|157018662|gb|EAL41155.3| AGAP000591-PA [Anopheles gambiae str. PEST] Length = 346 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 14/292 (4%) Query: 39 FSG-GKRLRPMLTLATALMLEYRGDN--------HVLLACAIEFIHTATLLHDDVVDDSA 89 F G GK RPM+ + A L Y N +A E IHTA+L+HDDV+D S Sbjct: 59 FDGQGKAFRPMVAILMAKALNYHMHNENSDVMNAQRQIAMISEMIHTASLVHDDVIDQSF 118 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRGK + ++W ++ GD++L+ A ++ K E LS V L +GE QL Sbjct: 119 ARRGKPSVNVLWNHKKVTQAGDYILAVASMLLARLKHDEVTHILSQVLTDLVQGEFMQLG 178 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + Y KTA L + +L+ ++++G + + YG NLG+AFQ VD Sbjct: 179 SKETENERFAHYFTKTYRKTASLIANSLKAVAVLSGADEQMAELSFQYGRNLGLAFQFVD 238 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ MGK D + G T PV+ A ++ + + G ++++ Sbjct: 239 DLLDFVSSSEAMGKPAAADLKLGLATAPVLFACEKFPELNPMILRRFREPG-----DVER 293 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A+ ++ +++ L T + A + +A + +S ++K L+ V DF L R+ Sbjct: 294 AYELVHQSQGLEQTRFLARKHCIEALRLASQISESPYQKGLIVVGDFVLNRM 345 >gi|15607702|ref|NP_215076.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv] gi|15839960|ref|NP_334997.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31791744|ref|NP_854237.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97] gi|121636480|ref|YP_976703.1| putative polyprenyl-diphosphate synthase grcC1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660331|ref|YP_001281854.1| putative polyprenyl-diphosphate synthase GrcC1 [Mycobacterium tuberculosis H37Ra] gi|148821763|ref|YP_001286517.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis F11] gi|167968365|ref|ZP_02550642.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis H37Ra] gi|215402328|ref|ZP_03414509.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis 02_1987] gi|215410099|ref|ZP_03418907.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis 94_M4241A] gi|215425797|ref|ZP_03423716.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T92] gi|215444672|ref|ZP_03431424.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T85] gi|218752200|ref|ZP_03530996.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis GM 1503] gi|219556398|ref|ZP_03535474.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T17] gi|224988952|ref|YP_002643639.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|253797494|ref|YP_003030495.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN 1435] gi|254230904|ref|ZP_04924231.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis C] gi|254363521|ref|ZP_04979567.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis str. Haarlem] gi|254549517|ref|ZP_05139964.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185436|ref|ZP_05762910.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis CPHL_A] gi|260199565|ref|ZP_05767056.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T46] gi|289441947|ref|ZP_06431691.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T46] gi|289446109|ref|ZP_06435853.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis CPHL_A] gi|289552814|ref|ZP_06442024.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN 605] gi|289568490|ref|ZP_06448717.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T17] gi|289744275|ref|ZP_06503653.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis 02_1987] gi|289749061|ref|ZP_06508439.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T92] gi|289756639|ref|ZP_06516017.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T85] gi|289760681|ref|ZP_06520059.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis GM 1503] gi|294996072|ref|ZP_06801763.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis 210] gi|297633052|ref|ZP_06950832.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN 4207] gi|297730029|ref|ZP_06959147.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN R506] gi|298524050|ref|ZP_07011459.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis 94_M4241A] gi|306774666|ref|ZP_07413003.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu001] gi|306779417|ref|ZP_07417754.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu002] gi|306783203|ref|ZP_07421525.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu003] gi|306787573|ref|ZP_07425895.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu004] gi|306792123|ref|ZP_07430425.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu005] gi|306796310|ref|ZP_07434612.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu006] gi|306802169|ref|ZP_07438837.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu008] gi|306806378|ref|ZP_07443046.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu007] gi|306966577|ref|ZP_07479238.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu009] gi|306970770|ref|ZP_07483431.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu010] gi|307078494|ref|ZP_07487664.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu011] gi|307083056|ref|ZP_07492169.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu012] gi|313657357|ref|ZP_07814237.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN V2475] gi|2114024|emb|CAB08957.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis H37Rv] gi|13880100|gb|AAK44811.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31617330|emb|CAD93439.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL PYROPHOSPHATE SYNTHETASE) [Mycobacterium bovis AF2122/97] gi|121492127|emb|CAL70592.1| Probable polyprenyl-diphosphate synthase grcC1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599963|gb|EAY58973.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis C] gi|134149035|gb|EBA41080.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis str. Haarlem] gi|148504483|gb|ABQ72292.1| putative polyprenyl-diphosphate synthase GrcC1 [Mycobacterium tuberculosis H37Ra] gi|148720290|gb|ABR04915.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis F11] gi|224772065|dbj|BAH24871.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|253318997|gb|ACT23600.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN 1435] gi|289414866|gb|EFD12106.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T46] gi|289419067|gb|EFD16268.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis CPHL_A] gi|289437446|gb|EFD19939.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN 605] gi|289542244|gb|EFD45892.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T17] gi|289684803|gb|EFD52291.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis 02_1987] gi|289689648|gb|EFD57077.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T92] gi|289708187|gb|EFD72203.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis GM 1503] gi|289712203|gb|EFD76215.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T85] gi|298493844|gb|EFI29138.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis 94_M4241A] gi|308216772|gb|EFO76171.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu001] gi|308327631|gb|EFP16482.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu002] gi|308331986|gb|EFP20837.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu003] gi|308335773|gb|EFP24624.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu004] gi|308339379|gb|EFP28230.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu005] gi|308343255|gb|EFP32106.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu006] gi|308347147|gb|EFP35998.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu007] gi|308351062|gb|EFP39913.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu008] gi|308355721|gb|EFP44572.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu009] gi|308359676|gb|EFP48527.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu010] gi|308363581|gb|EFP52432.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu011] gi|308367217|gb|EFP56068.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu012] gi|323721036|gb|EGB30100.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis CDC1551A] gi|326902391|gb|EGE49324.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis W-148] gi|328457279|gb|AEB02702.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN 4207] Length = 335 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 92/301 (30%), Positives = 159/301 (52%), Gaps = 17/301 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 E++ D + +L +GGKR RP+ T+ +A + + + IE IH ATL HDDV+D Sbjct: 42 EVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMD 101 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---G 143 ++ +RRG +A WGN ++L GD+LL+ A +V ++ EA+ ++A T A+ G Sbjct: 102 EAQVRRGAPSANAQWGNNVAILAGDYLLATASRLV----ARLGPEAVRIIADTFAQLVTG 157 Query: 144 ELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 ++R+ S+N+D E+ YL V++ KT L AA + + +G + + L G +G Sbjct: 158 QMRETRGTSENVDSIEQ-YLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVG 216 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK---REKNFWKSTIND 259 AFQ+ DD++D E +E GK G D R G TLP++ A + R + ++D Sbjct: 217 TAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRALLNGPVDD 276 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 +++A ++R + + + Y +A+ L LPD +++L +VD+ + Sbjct: 277 DA----EVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALVDYTVS 332 Query: 320 R 320 R Sbjct: 333 R 333 >gi|91215079|ref|ZP_01252051.1| putative isoprenoid biosynthesis related protein [Psychroflexus torquis ATCC 700755] gi|91186684|gb|EAS73055.1| putative isoprenoid biosynthesis related protein [Psychroflexus torquis ATCC 700755] Length = 324 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 131/246 (53%), Gaps = 9/246 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKRLRP+L L +A + + + A AIE H +L+HDD++DD+ LRRG Sbjct: 31 IEYILGLGGKRLRPVLVLMSADIFGGGREKAMDAALAIEIFHNFSLVHDDIMDDAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----SLVACTLAEGELRQLS 149 + W T +L GD +L A+ + E E + L + A + EG+ + Sbjct: 91 QQTVHEKWNINTGILSGDAMLINAYQL-FENYPAEHFKPLAELFTKTAIEVCEGQQYDVD 149 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + DVT E+YL +I+ KTAVL AAL++ ++++ V +V+ + +G LGIAFQ+ D Sbjct: 150 FEERDDVTIEEYLKMIEYKTAVLVGAALKMGAILSDVSQNVQNKIYEFGRLLGIAFQIQD 209 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVI----LAFQRGTKREKNFWKSTINDGKISVE 265 D LD GE GK IG D K T + LA Q ++ K+ + + + +E Sbjct: 210 DYLDTFGEQAVFGKQIGGDIIENKKTYLYLRALELADQSSAEQLKHLYTISPENPSNKIE 269 Query: 266 NLKKAF 271 K+ F Sbjct: 270 TAKQIF 275 >gi|145225827|ref|YP_001136505.1| trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK] gi|145218313|gb|ABP47717.1| Trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK] Length = 335 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 90/296 (30%), Positives = 154/296 (52%), Gaps = 9/296 (3%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDD 87 ++ + V +L +GGKR RP+ T+ +A + V +A A IE +H ATL HDDV+D+ Sbjct: 43 LMSEAVNHLFQAGGKRFRPLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDVMDE 102 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA---EGE 144 + +RRG +A WGN ++L GD+L F S+ EA+ ++A T A G+ Sbjct: 103 AQVRRGAPSANARWGNNIAILAGDYL----FATASRLTSRLGPEAVRIIADTFALLVTGQ 158 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 +R+ + + + + YL V+ KTA L SA+ + +G + + L G +G A Sbjct: 159 MRETRGAADQVDSVDHYLKVVYEKTACLISASGRFGATFSGSDEAQIERLAKLGGIVGTA 218 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD++D + +E GK G D R G TLPV+ A R T + + + + Sbjct: 219 FQISDDIIDIDSDADESGKVPGTDLREGVHTLPVLYAL-RETGPDADRLRELLAGPVTDD 277 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ +A ++R ++ + + Y Q+A+ L LPD +++L +VD+ + R Sbjct: 278 ADVAEALRLLRGSQGIRKAKETVIGYAQEAQRELDQLPDVPGRQALASLVDYTVNR 333 >gi|329765834|ref|ZP_08257400.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137677|gb|EGG41947.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 283 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 104/177 (58%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGKR+RP++ A + DN + +CA+EF+H +++HDD++D+ +RR + + Sbjct: 48 GGKRIRPIILSLAAESVGKIDDNTLAASCAVEFLHMESIIHDDIIDNETMRRQREPFHIK 107 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G TSVL GDF+L + + + L+ A ++EGE+ + L + DVT +D Sbjct: 108 YGYNTSVLTGDFVLGLILAISSRLDNARITKDLATTAMLMSEGEMIESRLESSEDVTFDD 167 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 YL VI+ KTA F A + ++IA +AL YG N+GIA+Q+ DD+LD++ E Sbjct: 168 YLKVIEYKTATAFEVAARIGAIIASGSEEEIEALTEYGKNIGIAYQIRDDLLDWKNE 224 >gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L] gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L] Length = 309 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 79/249 (31%), Positives = 128/249 (51%), Gaps = 15/249 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKRLRP+L LAT ++ + + +CA+E IHT +L+HDD+ +D+ Sbjct: 46 IYEAMRYSLLAGGKRLRPILCLATCELMGGTVEMAMPTSCALEMIHTMSLIHDDLPAMDN 105 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVA--------C 138 RRGK+ V+G ++L GD LL+ AF +TK+ A + L +VA Sbjct: 106 DDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYAAAQTKNVPAPQVLQVVAWLAKAVGAS 165 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ L D+ EE + KT L A + ++AG + Q L Y Sbjct: 166 GLVGGQVLDLESEGKSDIKEETLSFIHTHKTGALLEACVVCGGILAGATAANLQRLSKYA 225 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 N+G+AFQ+VDD+LD E+GK G+D + K T P + + + + +N Sbjct: 226 QNIGLAFQIVDDILDITATQEELGKTAGKDIKAQKATYPSLWGLEASKAKAQEL----VN 281 Query: 259 DGKISVENL 267 + K +E+ Sbjct: 282 EAKAQIESF 290 >gi|317123859|ref|YP_004097971.1| polyprenyl synthetase [Intrasporangium calvum DSM 43043] gi|315587947|gb|ADU47244.1| Polyprenyl synthetase [Intrasporangium calvum DSM 43043] Length = 336 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 90/313 (28%), Positives = 156/313 (49%), Gaps = 5/313 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + +V+ L+ + + I +L +GGKR RP+LTL +A + E D+ V A + Sbjct: 27 LARVDALLRTVVDHEDPFIAAASSHLAQAGGKRFRPLLTLLSAELGEGVTDDVVRAAAGV 86 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL- 130 E H A+L HDDV+D++ +RRG +A V+ N T++LVGD L +A ++ ++ L Sbjct: 87 ELTHLASLYHDDVMDEAEVRRGVPSANAVYDNSTAILVGDLLFGKASELIAGLGAEAVLI 146 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEED-YLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +A + V L G++R DV D YL V+ KT L + A ++ +G Sbjct: 147 QAQTFV--RLCSGQIRDDRPCPP-DVDPIDYYLGVLADKTGSLTATACRYGAMFSGGSPE 203 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + + ++SYG +G+ FQL DD++D + GK G D R G TL V+ A + Sbjct: 204 LVETMRSYGEKVGMTFQLADDLIDIASDSEASGKTPGTDLREGVDTLAVLRAKASTDPAD 263 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + + +D + +A ++R++ AL Y ++A+ L LP++ K + Sbjct: 264 ERLLELLHSDLSGDEAAVSEALTLLRQHPALEAARAETYGVAREAQALLDPLPETPAKTA 323 Query: 310 LMEVVDFCLQRLN 322 L + ++R+ Sbjct: 324 LQTLALSVVERVG 336 >gi|294507897|ref|YP_003571955.1| polyprenyl synthetase [Salinibacter ruber M8] gi|294344225|emb|CBH25003.1| polyprenyl synthetase [Salinibacter ruber M8] Length = 343 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 87/288 (30%), Positives = 148/288 (51%), Gaps = 5/288 (1%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D V++++ +GGKR+RP+L L A D + A A+E H TL+HDD++D+ R Sbjct: 50 DAVEHVLRAGGKRVRPVLLLLVAQSYGTSVDRALPAALAVEVFHNFTLVHDDLMDEDDER 109 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE----GELRQ 147 RG W T++L GD ++ ++ ++ + + +A EAL V + E G+ Sbjct: 110 RGGATVHAKWNPGTAILAGDLMMGLSYDLLGQVEGTDA-EALYAVYHPMVERLCAGQALD 168 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 S + VT E YL +I KT L SAA E+ S+I G + R L + G +G AFQ+ Sbjct: 169 ASFETDDAVTVEAYLDMIDRKTGALLSAAFELGSVIGGAPSPERDRLGTAGRLVGRAFQI 228 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DD+LD + G+ +G D GK T + A +R E +++ + DG + +++ Sbjct: 229 QDDLLDLTADDEAWGRGVGGDLVQGKKTFLTLRALERAEGAEHDWFARLVTDGGLPRDDV 288 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 +A M + + ++Y +KA D L LP+++ ++L ++D Sbjct: 289 PEARERMADLGIFEEAREAVHTYTEKAHDHLHLLPETAAAETLHWLLD 336 >gi|83816814|ref|YP_445986.1| polyprenyl synthetase [Salinibacter ruber DSM 13855] gi|83758208|gb|ABC46321.1| polyprenyl synthetase [Salinibacter ruber DSM 13855] Length = 342 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 87/288 (30%), Positives = 148/288 (51%), Gaps = 5/288 (1%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D V++++ +GGKR+RP+L L A D + A A+E H TL+HDD++D+ R Sbjct: 49 DAVEHVLRAGGKRVRPVLLLLVAQSYGTSVDRALPAALAVEVFHNFTLVHDDLMDEDDER 108 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE----GELRQ 147 RG W T++L GD ++ ++ ++ + + +A EAL V + E G+ Sbjct: 109 RGGATVHAKWNPGTAILAGDLMMGLSYDLLGQVEGTDA-EALYAVYHPMVERLCAGQALD 167 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 S + VT E YL +I KT L SAA E+ S+I G + R L + G +G AFQ+ Sbjct: 168 ASFETDDAVTVEAYLDMIDRKTGALLSAAFELGSVIGGAPSPERDRLGTAGRLVGRAFQI 227 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DD+LD + G+ +G D GK T + A +R E +++ + DG + +++ Sbjct: 228 QDDLLDLTADDEAWGRGVGGDLVQGKKTFLTLRALERAEGAEHDWFARLVTDGGLPRDDV 287 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 +A M + + ++Y +KA D L LP+++ ++L ++D Sbjct: 288 PEARERMADLGIFEEAREAVHTYTEKAHDHLHLLPETAAAETLHWLLD 335 >gi|326201956|ref|ZP_08191826.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] gi|325987751|gb|EGD48577.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] Length = 294 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 82/228 (35%), Positives = 119/228 (52%), Gaps = 10/228 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + Y + +GGKRLRP+L LA A ML+ D + CAIE IHT +L+HDD+ +D+ Sbjct: 32 IKKAMSYSLLAGGKRLRPLLALAVAEMLDKPFDEVINFGCAIEMIHTYSLIHDDLPAMDN 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETKSQEALEALSLVA---CTL 140 RRGK V+G ++L GD LL+ A+ ++I E+KS + + A +VA +L Sbjct: 92 DDYRRGKPTNHKVFGEAMAILAGDGLLNMAYEIMINDAVESKSIDKMRAAGIVAKYAGSL 151 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + L E D L + + KT L A +E +++I G + L Y Sbjct: 152 GMVGGQVIDLQSEGKTIESDRLKTMHRLKTGALIKAPVEAAAVICGADKKEFELLSGYAA 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 NLG+AFQ+ DD+LD G V MGKN G D K T + + K Sbjct: 212 NLGLAFQIKDDILDIEGTVENMGKNPGNDSSCNKSTYVTMYGLEESKK 259 >gi|239928020|ref|ZP_04684973.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Streptomyces ghanaensis ATCC 14672] gi|291436352|ref|ZP_06575742.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672] gi|291339247|gb|EFE66203.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672] Length = 324 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 81/272 (29%), Positives = 135/272 (49%), Gaps = 4/272 (1%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 +F GK LRP+L + +A + + + A IE +H A+L+HDD+VD +RRG+ + Sbjct: 39 LFPPGKLLRPILCMESAKAVGGTAEQVLAFAAGIECLHVASLIHDDIVDQDPVRRGRAST 98 Query: 98 RLVWGNQTSVLVGDFL-LSQAFCMVIETKSQEALEALSLVACTL---AEGELRQLSLSKN 153 +G +++ GD L ++ M+ ++ L A + L +G +R+ + + Sbjct: 99 AEQYGLAEALVAGDGLSMAGIAAMLSGGPAERVLHAARVTVEALRHMCQGIMRETEIRGD 158 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 L L+VI KTA L AA + +++AG QAL YG LG+AFQ+ DD+L Sbjct: 159 LTCAVPTVLNVIHDKTAALTGAACQAGAILAGATPGQTQALHQYGEQLGMAFQIRDDLLP 218 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 Y E GK+ D N +PTLPV+LA++ +++ + V + + Sbjct: 219 YTAEDQITGKSAISDVANLQPTLPVLLAYEVADTADRDRLTTAFRSETDPVTAHRDILAV 278 Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + AL A S ++A+ +L LPDS+ Sbjct: 279 LTRTGALTKAAQMASSCAEQARAALTGLPDST 310 >gi|189499392|ref|YP_001958862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1] gi|189494833|gb|ACE03381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1] Length = 332 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 79/260 (30%), Positives = 137/260 (52%), Gaps = 9/260 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +Y++ GKR+RP LTL A + +N + A A+E +H TL+HDD++D + LR G Sbjct: 41 ARYILDGTGKRIRPFLTLLAAEAVCGSSENAIKTALAVEILHNFTLVHDDIMDQADLRHG 100 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQLSL 150 + + W + ++L GD +++ A+ ++TK+ E + L+ T+ EG+ + L Sbjct: 101 RPTVHVKWDSTAAILSGDMMIAFAYECALQTKTARHDELVHILNDANITICEGQAIDMEL 160 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + D T DYL +I KT L SA+LE ++ + + L +G +G AFQ+ DD Sbjct: 161 EQRQDATIADYLDMIAKKTGRLISASLEAGGIVGDADSEQIEKLMLFGDKIGRAFQVQDD 220 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 LD E + GK G D NGK T ++ + + T +E++ + I++ IS + + + Sbjct: 221 YLDIMAENGKSGKVPGGDVINGKKTYLLLRSLELTTGQERDMLQFVIDNKGISPDRVPEI 280 Query: 271 FII------MRENRALVDTE 284 I + E R L++T+ Sbjct: 281 RAIYEQCGVLDEARDLINTD 300 >gi|159465717|ref|XP_001691069.1| geranyl diphosphate synthase [Chlamydomonas reinhardtii] gi|158279755|gb|EDP05515.1| geranyl diphosphate synthase [Chlamydomonas reinhardtii] Length = 410 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/327 (30%), Positives = 156/327 (47%), Gaps = 34/327 (10%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRPMLTL-------ATALMLEY--------RGDNHV 65 + + + + +Y G GKRLRP L L A EY H Sbjct: 87 VTTGIPALKTAAEYFFRRGIEGKRLRPTLALLMSSALSPAAPSPEYLQVDTRPAAEHPHE 146 Query: 66 L------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 + LA E IH A+LLHDDV+DD+ RRG ++ GN+T++L GDFLL++A Sbjct: 147 MRRRQQRLAEIAELIHVASLLHDDVIDDAQTRRGVLSLNTSVGNKTAILAGDFLLARASV 206 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + ++ E +E +S V L GE+ Q++ + + E YL KTA L + + Sbjct: 207 TLASLRNSEIVELMSQVLEHLVSGEIMQMTATSEQLLDLEHYLAKTYCKTASLMANSSRS 266 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++AG V SYG +LGIAFQ+VDD+LD G + +GK D R+G T PV+ Sbjct: 267 VAVLAGAAPEVCDMAWSYGRHLGIAFQVVDDLLDLTGSSSVLGKPALNDMRSGLATAPVL 326 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q + + +DG ++ KA ++ + L E A + + A D +R Sbjct: 327 FAAQEEPALQALILRRFKHDGDVT-----KAMSLIERTQGLRRAEELAAQHAKAAADMIR 381 Query: 300 CLPDSS------WKKSLMEVVDFCLQR 320 CLP + +++L+++ L R Sbjct: 382 CLPTAQSDHAEIAREALIQITHRVLTR 408 >gi|293342919|ref|XP_002725354.1| PREDICTED: rCG40823-like isoform 2 [Rattus norvegicus] Length = 422 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 94/321 (29%), Positives = 152/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + D+ +Y GK RP++ + A +N Sbjct: 105 LGWRDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRE 164 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTATL+HDDV+DD++ RRGK VWG Q +VL GD +LS A Sbjct: 165 MQARQRSVALVAEMIHTATLVHDDVIDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASI 224 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 225 ALARIGNTAVVSLLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 284 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 285 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVL 344 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G + + + +++ ++ + T Y A Y KA +R Sbjct: 345 FACQQFPEMNAMIMRRFSLPGDV---DRARQYVL--QSDGVQQTTYLAQQYCHKAVREIR 399 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S+ + +L+++ + L R Sbjct: 400 KLRPSTERDALIQLSESVLTR 420 >gi|259650464|dbj|BAI42626.1| polyprenyl synthetase [Lactobacillus rhamnosus GG] Length = 312 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 6/291 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +++ I +GGK LR L L A E V AIE +H ATL+HDDV+D + +RR Sbjct: 27 LIQQQINAGGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDVLDHADIRR 86 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-LEALSLVACTLAEGELRQLSLS 151 G GN+ ++ GDFL + F ++ E + L + + + GE+ Q S Sbjct: 87 GMTTVSAESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNARIMKRIFMGEVDQNGPS 146 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 L T YL I KTA LF+ A + I + + ++A +G LG+AFQ++DD+ Sbjct: 147 APLIPTVNAYLSAISGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDL 206 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LDY + K ED NG TLP+I A+Q + K K+ + N + Sbjct: 207 LDYTQTAKTLNKPALEDLNNGIVTLPLIYAYQTVPDQLKPLTKT----AEQIAANADEIA 262 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 I+R++ L A++Y +A +L LP S K +L ++ LQR + Sbjct: 263 AIVRKH-GLPQAHQLAFTYTHRAITALNPLPSSPTKAALTKLTQQLLQRTH 312 >gi|302868180|ref|YP_003836817.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] gi|302571039|gb|ADL47241.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] Length = 339 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 111/217 (51%), Gaps = 7/217 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +V+Y + GK LRPM+TL A + + + A E++H ATL+HDD++D LRR Sbjct: 43 IVRYALLPAGKMLRPMMTLHAAEAVGGSPRDVLAAALGTEYLHVATLVHDDIIDADTLRR 102 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-------LAEGEL 145 G+ A + +G +++ GD L+ AF ++E+ ++ L G+ Sbjct: 103 GRPAVPVAYGIPGAIVAGDHLIFHAFQAMVESGRAVPAASVVAAVTALAEAGQDLCRGQA 162 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + L +LD Y +I+ KT LF A + +L+ G V L YG ++G AF Sbjct: 163 LEARLVGDLDAGARWYPEMIRLKTGSLFRAVCHIGALLGGADPLVASGLARYGEHVGTAF 222 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 Q+ DD+L Y + GK D NG+PTLP++LA+ Sbjct: 223 QIRDDLLSYLSTPEQTGKPATSDLNNGRPTLPLLLAY 259 >gi|292656843|ref|YP_003536740.1| geranylgeranyl diphosphate synthase [Haloferax volcanii DS2] gi|291372747|gb|ADE04974.1| geranylgeranyl diphosphate synthase [Haloferax volcanii DS2] Length = 348 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 164/307 (53%), Gaps = 23/307 (7%) Query: 35 KYLIFSGGKRLRPMLTLATALML--------EYR------GD--NHVLLACAIEFIHTAT 78 +YL+ +GGKRLRP ++L TA L +YR GD + ++ A +IE I + T Sbjct: 42 RYLLKAGGKRLRPTVSLLTAESLADVEPMSEDYRAFPTLAGDPIDVMVAAVSIEVIQSFT 101 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLV 136 L+HDD++DD LRRG A + N T++L GD L ++AF ++ +T + A LEA+ + Sbjct: 102 LIHDDIMDDDDLRRGVPAVHKEYDNSTAILAGDTLYAKAFELLTKTGADPADGLEAVRRL 161 Query: 137 ACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 A T + EG+ + + +V ++YL +++ KTAVL+ A V +++ G + V +A Sbjct: 162 ATTCTQICEGQALDIEFERRTEVLPDEYLQMVELKTAVLYGTAAAVPAVVMGADDEVVEA 221 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L YG+ G AFQ+ DDVLD +++GK G D K T+ + A Q+G + Sbjct: 222 LYQYGIASGSAFQIQDDVLDLTVPSDQLGKQRGSDLVENKETIISLHARQQGIDVDDLVD 281 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 T +++ + ++ A + E ++ A ++AK L LPD+ + L ++ Sbjct: 282 AETAE--ELTEDAVEAAVAELNEAGSIDYAREMAEDLTEQAKSRLDVLPDNEARDLLCDI 339 Query: 314 VDFCLQR 320 D+ + R Sbjct: 340 ADYLITR 346 >gi|146299023|ref|YP_001193614.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101] gi|146153441|gb|ABQ04295.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101] Length = 324 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 89/305 (29%), Positives = 153/305 (50%), Gaps = 12/305 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +++L + I + + + ++Y++ GGKR+RP+LTL A + + + A A+E Sbjct: 12 IDYLKNQNIHKEPTNLYEPIEYILGLGGKRMRPVLTLMAAEVFDTNYKTALPAAMAVEVF 71 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL- 133 H +L+HDD++DD+ LRRG+V W T +L GD +L A+ E E L Sbjct: 72 HNFSLVHDDIMDDAPLRRGQVTVHEKWDLNTGILSGDAMLILAY-QYFEQYEPEVFRDLA 130 Query: 134 ---SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 S A + EG+ + + +VT +YL +I+ KTAVL +AA+++ +++A Sbjct: 131 KLFSKTALEVCEGQQWDVDFEQRNNVTIPEYLKMIEYKTAVLVAAAMKMGAIVAKTSEKE 190 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE- 249 + +G+NLG+AFQL DD LD G+ GK +G D K T + A + T + Sbjct: 191 GDLIYDFGLNLGLAFQLQDDYLDAFGDPETFGKQVGGDIIENKKTYLYLKALEFSTPEKA 250 Query: 250 ---KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + + D +E K F E+ A T+ Y KA ++L + ++ Sbjct: 251 SELEKLFSLQLEDNSEKIETAKAIF---NESGASKSTQEAIEMYTFKAFETLEKMDINAE 307 Query: 307 KKSLM 311 KK+++ Sbjct: 308 KKNIL 312 >gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301] gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301] Length = 299 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 80/233 (34%), Positives = 127/233 (54%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ + ++Y + +GGKR+RP+L LA+ + V A AIE IHT +L+HDD+ + Sbjct: 35 EILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAM 94 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSLVAC 138 D+ LRRG+ V+G+ ++L GD LL++AF MV + + LSLVA Sbjct: 95 DNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFEMVSLRSPGVDPNRLLNVIGELSLVAG 154 Query: 139 T--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L K +D+ +Y+H+ KT L A + ++IAG + QAL Sbjct: 155 APGLVGGQVVDLECEGKEVDLDTLEYIHL--HKTGALLKACVRTGAMIAGANEKLLQALT 212 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +Y +G+AFQ++DD+LD ++GK G+D K T P +L + KR Sbjct: 213 TYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLGMEESKKR 265 >gi|314936397|ref|ZP_07843744.1| heptaprenyl diphosphate synthase, component II [Staphylococcus hominis subsp. hominis C80] gi|313655016|gb|EFS18761.1| heptaprenyl diphosphate synthase, component II [Staphylococcus hominis subsp. hominis C80] Length = 318 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 119/223 (53%), Gaps = 1/223 (0%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLH 81 I S+ ++ + +L+ SGGKR+RP L ++ + ++ +A A+E IH ATL+H Sbjct: 21 IKSNDSVLQEAAFHLLSSGGKRVRPAFVLLSSQFGPKKITEDTYHVAVALELIHMATLVH 80 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DDV+D S RRGK+ W T++L G+FLL+ + + + +S + Sbjct: 81 DDVIDKSDKRRGKLTIEKKWDITTAILTGNFLLALGLKQLSKIEDHRVHTIISNAIVDVC 140 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 GEL Q N +YL I KTA+L + EV ++ + N + LK G + Sbjct: 141 RGELFQFQDQFNSHQNITNYLRRINRKTALLIQLSTEVGAITSQADNETIRKLKMIGHYI 200 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G++FQ+VDD+LD+ ++GK +G D NG TLPV+L ++ Sbjct: 201 GMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPVLLEMKK 243 >gi|228476073|ref|ZP_04060781.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus hominis SK119] gi|228269896|gb|EEK11376.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus hominis SK119] Length = 318 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 119/223 (53%), Gaps = 1/223 (0%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLH 81 I S+ ++ + +L+ SGGKR+RP L ++ + ++ +A A+E IH ATL+H Sbjct: 21 IKSNDSVLQEAAFHLLSSGGKRVRPAFVLLSSQFGPKKITEDTYHVAVALELIHMATLVH 80 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DDV+D S RRGK+ W T++L G+FLL+ + + + +S + Sbjct: 81 DDVIDKSDKRRGKLTIEKKWDVTTAILTGNFLLALGLKQLSKIEDHRVHTIISNAIVDVC 140 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 GEL Q N +YL I KTA+L + EV ++ + N + LK G + Sbjct: 141 RGELFQFQDQFNSHQNITNYLRRINRKTALLIQLSTEVGAITSQADNETIRKLKMIGHYI 200 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G++FQ+VDD+LD+ ++GK +G D NG TLPV+L ++ Sbjct: 201 GMSFQIVDDILDFTSTEKKLGKPVGSDLMNGHITLPVLLEMKK 243 >gi|124003018|ref|ZP_01687869.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps) [Microscilla marina ATCC 23134] gi|123991668|gb|EAY31076.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps) [Microscilla marina ATCC 23134] Length = 323 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 121/223 (54%), Gaps = 9/223 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSAL 90 ++Y++ GGKR+RP+L L + + DNH + A ++E H TL+HDD++D++ L Sbjct: 30 IRYIMSLGGKRMRPLLVLLGYSLFD---DNHQKAMNAALSVEVFHNFTLVHDDIMDEAPL 86 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQ 147 RRGK W T +L GD +L QA+ ++++ S + + + A + EG+ Sbjct: 87 RRGKPTIHQKWNTNTGILSGDVMLVQAYELLLDIDSAHLKRVIGKFNRCAAEVCEGQQLD 146 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 ++ V E DYL++I+ KTAVL +LE+ ++A L +G+N+G+ FQL Sbjct: 147 MNFEHIDAVPEADYLNMIRLKTAVLLGYSLELGGIVANANKVAADLLNGFGVNIGVGFQL 206 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +DD+LD + + GK +G D K T +I A + + K Sbjct: 207 MDDLLDVYADAAKFGKQVGGDIIANKKTFLLINALKLAEGKTK 249 >gi|257868135|ref|ZP_05647788.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC30] gi|257874590|ref|ZP_05654243.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC10] gi|257802249|gb|EEV31121.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC30] gi|257808754|gb|EEV37576.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC10] Length = 323 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 93/293 (31%), Positives = 151/293 (51%), Gaps = 13/293 (4%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNH----VLLACAIEFIHTATLLHDDVVDDSALRR 92 +I SGGK LRP L L Y D V LA +IE +HTA+L+HDD+VD + RR Sbjct: 37 MIHSGGKLLRPAYQL---LFSAYGSDKDREKAVALAASIEMLHTASLIHDDIVDHADTRR 93 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACTLAEGELRQLSLS 151 R +GN +V GD+L F ++ + S ++L+ S + GEL Q+S Sbjct: 94 KLPTIRSEFGNDVAVYAGDYLFVCCFKLMADYASSMKSLQMNSRSMEKILAGELGQMSKR 153 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 +L VT EDYL I+ KTA LF+ + + + +G + G +G+AFQ++DDV Sbjct: 154 YDLSVTVEDYLENIRGKTAELFALSCFIGAYESGTSLRFANQAREIGEAIGLAFQIMDDV 213 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LDY + +GK + ED R G +LP+++A + + R++ D + + + Sbjct: 214 LDYSQDAAALGKPVLEDVRQGVYSLPLLMALK--SDRQQLLPLLEKQDAMTDTDT-HEVY 270 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--SWKKSLMEVVDFCLQRLN 322 I++E+ + + + A Y +KA +++ LP++ K L ++ L R N Sbjct: 271 RIVQESAGIEEAKKLAADYTKKALQAIQKLPETKDETKTYLYQITAQILGRQN 323 >gi|161527795|ref|YP_001581621.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1] gi|160339096|gb|ABX12183.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1] Length = 283 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 102/177 (57%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGKR+RP++ +A + DN +CA+EF+H +++HDD++D+ +RR K + Sbjct: 48 GGKRIRPIILTLSAESIGKVDDNTFAASCAVEFLHMESIIHDDIIDNETMRRQKDPFHIK 107 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G TSVL GDF+L + + + L+ A ++EGE+ + L + DVT +D Sbjct: 108 YGYNTSVLTGDFVLGLILAVCSRLDNPRITKDLATTAMLMSEGEMIENRLETSEDVTFDD 167 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 YL VI+ KTA F A ++IA + L YG N+GIA+Q+ DD+LD++ E Sbjct: 168 YLKVIEYKTATAFEVAARTGAIIANGTEEQIEGLTEYGKNIGIAYQIRDDLLDWKNE 224 >gi|118085662|ref|XP_418592.2| PREDICTED: similar to PDSS1 protein [Gallus gallus] Length = 366 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 93/321 (28%), Positives = 152/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L KD++ + I K + + ++ +Y GK RPM+ +A A + + Sbjct: 49 LGRKDLKNLYEDIKKELLVSTAELREMCEYYFDGKGKAFRPMIVVLMARACNIHHSNSRE 108 Query: 65 VL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD+ RRGK+ +WG + +VL GDF+LS A Sbjct: 109 VQASQRSVAIIAEMIHTASLVHDDVIDDANSRRGKMTVNQIWGERKAVLAGDFILSAASL 168 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 169 ALARIGNTTIISVLTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 228 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ + +GK D + G T PV+ Sbjct: 229 VSILGCPDPKVHEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPVL 288 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A ++ + + G VE +K + ++ + T Y A Y +A + Sbjct: 289 FACRQFPEMNAMIMRRFSKPG--DVERARKYVL---QSDGVQQTTYLAQRYCHEATREIS 343 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S +++L+++ + L R Sbjct: 344 KLRPSPEREALIQLTEMVLMR 364 >gi|38018123|gb|AAR08151.1| geranyl diphosphate synthase [Vitis vinifera] Length = 321 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 95/302 (31%), Positives = 145/302 (48%), Gaps = 26/302 (8%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALML----------------EYRGD 62 + ++V + +Y G GKR RP +L +ATAL + E R Sbjct: 2 VVAEVPKLASAAEYFFKMGVEGKRXRPTVLLLMATALNVPLPRPALAEVPETLSTELRTR 61 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + A E IH A+LLHDDV+DD+ RRG + ++ GN+ +VL GDFLLS+A + Sbjct: 62 QQCI-AEITEMIHVASLLHDDVLDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALA 120 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 K+ E + L+ V L GE Q++ + V+ E YL KTA L S + + +L Sbjct: 121 SLKNTEVVSLLATVVEHLVTGETMQMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIAL 180 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AG V YG NLG+AFQL+DD LD+ G +GK D R+G T P++ A Sbjct: 181 LAGQTAEVSMLAFEYGKNLGLAFQLIDDXLDFTGTSASLGKGSLSDIRHGIITAPILFAI 240 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + + + + N I + A + +R + T A + A +++ LP Sbjct: 241 EEFPQLDAVVKRGLDNPADIDL-----ALDYLGRSRGIQRTRELAMKHANLAAEAIDSLP 295 Query: 303 DS 304 +S Sbjct: 296 ES 297 >gi|149920952|ref|ZP_01909413.1| polyprenyl synthetase [Plesiocystis pacifica SIR-1] gi|149818224|gb|EDM77679.1| polyprenyl synthetase [Plesiocystis pacifica SIR-1] Length = 589 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 84/227 (37%), Positives = 116/227 (51%), Gaps = 5/227 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 E + YL GGKR RP+LTL A A + LA +E++H +LL DD+V Sbjct: 298 ETFAEASSYLQAQGGKRARPLLTLSAAEACGGADEAQRALGLAAGVEWLHQGSLLLDDIV 357 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D + LRRG+ A + V F+ ++ + E AL A TLAEGE Sbjct: 358 DAAELRRGRQALHAATSPTFAAGVATFVFAR-VVRASQGMHPEIRSALVNSAATLAEGER 416 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 +L + ++ DY +I +KTA LF+ A+EV + G +AL YG LG+AF Sbjct: 417 LELQRTGEAELPRTDYYAIIAAKTASLFACAVEVGARAVGAPRGQVRALIRYGRELGLAF 476 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR--GTKREK 250 Q++DDVLDY GE GK G D GK TLP I+ + G +RE+ Sbjct: 477 QIIDDVLDYVGEARVFGKRPGTDLAAGKTTLPFIVLREALGGAERER 523 >gi|258509177|ref|YP_003171928.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus GG] gi|257149104|emb|CAR88077.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus GG] Length = 322 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 6/291 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +++ I +GGK LR L L A E V AIE +H ATL+HDDV+D + +RR Sbjct: 37 LIQQQINAGGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDVLDHADIRR 96 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-LEALSLVACTLAEGELRQLSLS 151 G GN+ ++ GDFL + F ++ E + L + + + GE+ Q S Sbjct: 97 GMTTVSAESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNARIMKRIFMGEVDQNGPS 156 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 L T YL I KTA LF+ A + I + + ++A +G LG+AFQ++DD+ Sbjct: 157 APLIPTVNAYLSAISGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDL 216 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LDY + K ED NG TLP+I A+Q + K K+ + N + Sbjct: 217 LDYTQTAKTLNKPALEDLNNGIVTLPLIYAYQTVPDQLKPLTKT----AEQIAANADEIA 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 I+R++ L A++Y +A +L LP S K +L ++ LQR + Sbjct: 273 AIVRKH-GLPQAHQLAFTYTHRAITALNPLPSSPTKAALTKLTQQLLQRTH 322 >gi|18447424|gb|AAL68276.1| RE18374p [Drosophila melanogaster] Length = 245 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 130/248 (52%), Gaps = 5/248 (2%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H+A+L+HDDV+D S RRGK + +W ++ + GD++LS A M+ +S + L Sbjct: 2 VHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIVL 61 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 S + L +GE QL + + YL KTA L + AL+ +++IA ++V + Sbjct: 62 SQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAEV 121 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 YG N+G+AFQLVDD+LD+ +MGK D + G T PV+ A ++ + Sbjct: 122 AFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYPELNPMVM 181 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + G ++++AF ++ ++ L T + A + +A + L +S ++K L V Sbjct: 182 RRFSEPG-----DVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKGLQVV 236 Query: 314 VDFCLQRL 321 D + R+ Sbjct: 237 ADLVINRM 244 >gi|326533542|dbj|BAK05302.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 424 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 147/304 (48%), Gaps = 30/304 (9%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALM------------------LEYR 60 + ++V + +Y G GKR RP +L +A+AL L R Sbjct: 105 VAAEVPKLESAAEYFFKVGAEGKRFRPTVLLLMASALKFPIPESTDIGVFSILASKLRTR 164 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 N +A E IH A+LLHDDV+DD+ RRG + + GN+ SVL GDFLLS+A Sbjct: 165 QQN---IAEITEMIHVASLLHDDVLDDADTRRGVTSLNCIMGNKLSVLAGDFLLSRACVA 221 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + E + ++ L GE Q+S S+ + E YL KTA L S + + Sbjct: 222 LAALGNTEVVSLMATAVGHLVTGETMQMSTSREQRRSMEYYLQKTYYKTASLISNSCKAV 281 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG V YG NLG+AFQL+DDVLD+ G +GK D R+G T P++ Sbjct: 282 AILAGHTAEVSVLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPMLY 341 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + E ++ G + N++ A ++++R + T+ A + A ++ Sbjct: 342 AME-----EFPQLHDVVDQGFDNPANVEIALEYLQKSRGIERTKELAQEHVNLAVKAIES 396 Query: 301 LPDS 304 LPDS Sbjct: 397 LPDS 400 >gi|293342917|ref|XP_002725353.1| PREDICTED: rCG40823-like isoform 1 [Rattus norvegicus] gi|149028595|gb|EDL83936.1| rCG40823, isoform CRA_b [Rattus norvegicus] Length = 409 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 94/321 (29%), Positives = 152/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + D+ +Y GK RP++ + A +N Sbjct: 92 LGWRDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRE 151 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTATL+HDDV+DD++ RRGK VWG Q +VL GD +LS A Sbjct: 152 MQARQRSVALVAEMIHTATLVHDDVIDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASI 211 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 212 ALARIGNTAVVSLLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 271 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 272 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVL 331 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G + + + +++ ++ + T Y A Y KA +R Sbjct: 332 FACQQFPEMNAMIMRRFSLPGDV---DRARQYVL--QSDGVQQTTYLAQQYCHKAVREIR 386 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S+ + +L+++ + L R Sbjct: 387 KLRPSTERDALIQLSESVLTR 407 >gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101] gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101] Length = 316 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 83/232 (35%), Positives = 128/232 (55%), Gaps = 19/232 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDV 84 E I + ++Y + +GGKRLRP+L LAT E G N + ACA+E IHT +L+HDD+ Sbjct: 51 EKIYEAMRYSLLAGGKRLRPILCLATC---ELSGGNIEMAMPTACALEMIHTMSLIHDDL 107 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVA---- 137 +D+ RRG++ V+G ++L GD LLS AF V+ +TK+ + L ++A Sbjct: 108 PSMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVVTQTKNVLPKQVLQVIARLGK 167 Query: 138 ----CTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQ 192 L G++ L+ S+ + E LH I + KT L A++ +++A V + Sbjct: 168 ASGAAGLVGGQVVDLA-SEGISQVSEKTLHFIHTHKTGALLEASVVCGAILADVSQANLY 226 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ Y N+G+AFQ+VDD+LD E+GK G+D K T PVI ++ Sbjct: 227 RLERYAQNIGLAFQIVDDILDITATTEELGKTAGKDIEAKKATYPVIWGLEK 278 >gi|294674496|ref|YP_003575112.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola 23] gi|294472118|gb|ADE81507.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola 23] Length = 324 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 89/252 (35%), Positives = 137/252 (54%), Gaps = 12/252 (4%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 EDL K E ++ L+ R + + D +KY++ GGKR+RP+LT+ + Y+ D Sbjct: 5 EDLLKKVNEALDNLVYDRQPAS---LYDPIKYVLSIGGKRVRPVLTMLAYNL--YKDDPL 59 Query: 65 VLL--ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 ++ A +E H TLLHDD++D + +RRG W ++L GD +L QAF V Sbjct: 60 SIMSQALGLETYHNFTLLHDDLMDHADMRRGHETVHKKWDANRAILSGDTMLLQAFERV- 118 Query: 123 ETKSQEALEAL--SLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 E L A+ + TL GE +QL + DVTE++Y+ +I+ KT+VL + A + Sbjct: 119 EDCDPAKLPAVFKVFIQTTLEIGEGQQLDVEFEQRNDVTEDEYIEMIRLKTSVLLACACK 178 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 V +++A + + +G LG+AFQL DD+LD G+ GKNIG D + K T + Sbjct: 179 VGAIMADAPAEDIENMYKFGEKLGLAFQLQDDLLDVYGDPAVFGKNIGGDITSNKKTYML 238 Query: 239 ILAFQRGTKREK 250 I AF R T ++ Sbjct: 239 INAFNRATPAQR 250 >gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601] gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601] Length = 300 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 80/233 (34%), Positives = 127/233 (54%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ + ++Y + +GGKR+RP+L LA+ + V A AIE IHT +L+HDD+ + Sbjct: 36 EILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSLVAC 138 D+ LRRG+ V+G+ ++L GD LL++AF MV T+ + LSLVA Sbjct: 96 DNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVVGELSLVAG 155 Query: 139 T--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L K +D+ +Y+H+ KT L A + ++IAG + AL Sbjct: 156 APGLVGGQVVDLECEGKEVDLKTLEYIHL--HKTGALLKACVRTGAMIAGANEKLLHALT 213 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +Y +G+AFQ++DD+LD ++GK G+D K T P +L + KR Sbjct: 214 TYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLGMEESKKR 266 >gi|165970696|gb|AAI58696.1| Unknown (protein for IMAGE:9025778) [Rattus norvegicus] Length = 407 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 94/321 (29%), Positives = 152/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + D+ +Y GK RP++ + A +N Sbjct: 90 LGWRDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRE 149 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTATL+HDDV+DD++ RRGK VWG Q +VL GD +LS A Sbjct: 150 MQARQRSVALVAEMIHTATLVHDDVIDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASI 209 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 210 ALARIGNTAVVSLLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 269 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 270 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVL 329 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G + + + +++ ++ + T Y A Y KA +R Sbjct: 330 FACQQFPEMNAMIMRRFSLPGDV---DRARQYVL--QSDGVQQTTYLAQQYCHKAVREIR 384 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S+ + +L+++ + L R Sbjct: 385 KLRPSTERDALIQLSESVLTR 405 >gi|224068584|ref|XP_002326151.1| predicted protein [Populus trichocarpa] gi|222833344|gb|EEE71821.1| predicted protein [Populus trichocarpa] Length = 321 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 106/321 (33%), Positives = 156/321 (48%), Gaps = 28/321 (8%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATAL---MLEYR----GD--------N 63 + ++V + +Y G GKR RP +L +ATAL +LE GD Sbjct: 2 VIAEVPKLASAAEYFFKMGVQGKRFRPTVLLLMATALNVRILETETGSEGDALTTELRKR 61 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A E IH A+LLHDDV+DD+ RRG + LV GN+ +VL GDFLLS+A + Sbjct: 62 QQSIAEITEMIHVASLLHDDVLDDADTRRGIGSLNLVMGNKVAVLAGDFLLSRACVALAS 121 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ E + L+ L GE Q++ + + E Y+ KTA L S + + +L+ Sbjct: 122 LKNTEVVTLLATAVEHLVNGETMQMTSTSEQRCSMEYYMQKTYYKTASLISNSCKAIALL 181 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V YG NLG+A+QL+DDVLD+ G +GK D R+G T P++ A + Sbjct: 182 AGQTTEVAMLAFEYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAME 241 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP- 302 E S I+ G EN+ A + ++R + T A + A ++ LP Sbjct: 242 -----EFPQLCSVIDRGFDKPENIDAALEYLGKSRGIQRTRELAAKHANLAAAAIDSLPE 296 Query: 303 --DSSWKKSLMEVVDFCLQRL 321 D +KS +VD QR+ Sbjct: 297 TDDEEVRKSRRALVDLT-QRV 316 >gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228] Length = 293 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 82/246 (33%), Positives = 136/246 (55%), Gaps = 16/246 (6%) Query: 24 CSDVEMIPDV---VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 C D E+ P + +KY + SGGKR+RP+LTL A +LE + A+E IH+ +L+ Sbjct: 25 CQD-ELAPQLTKSMKYTLLSGGKRIRPILTLLIAELLEGNYQAALKAGSALEMIHSYSLI 83 Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 HDD+ +DD LRRGK LV+G T++L GD LL+ AF ++ + + + L+ + ++A Sbjct: 84 HDDLPAMDDDKLRRGKKTNHLVFGEATAILAGDGLLTYAFQVLADLELKPDLK-VKIIAN 142 Query: 139 T--------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 T + G++ L ++N D+T ++ V ++KT L A++ + + Sbjct: 143 TAKFSGYQGMVGGQVLDLE-AENKDLTLQEMQKVHQAKTGALIKASVLNGVYCSDFKPEE 201 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++AL +Y +G+ FQ+VDD+LD GE MGK +G D K T P +L ++ K + Sbjct: 202 KKALLTYAEKIGVLFQIVDDLLDLTGETEAMGKVVGRDQELNKATYPKLLGLKKAQKEAE 261 Query: 251 NFWKST 256 + K Sbjct: 262 KYAKEA 267 >gi|315640276|ref|ZP_07895393.1| heptaprenyl diphosphate synthase [Enterococcus italicus DSM 15952] gi|315483938|gb|EFU74417.1| heptaprenyl diphosphate synthase [Enterococcus italicus DSM 15952] Length = 326 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 88/293 (30%), Positives = 149/293 (50%), Gaps = 5/293 (1%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLA-TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 + V +I +GGK LRP L ++ E +A AIE +HTATL+HDD+VD++ Sbjct: 35 VEQAVLQMIHAGGKMLRPAYQLLFSSFGPEKDRKKATAIAAAIEMLHTATLIHDDIVDEA 94 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRG + R +GN +V GD+L F M S ++L+ S ++ GEL Q Sbjct: 95 ELRRGLSSIRSQFGNSVAVYAGDYLFVSCFKLMANYASSMKSLQMHSKSMESILNGELGQ 154 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + N+D++ DYL I KTA LF+ + + + +G + G+ +G+AFQ+ Sbjct: 155 MDNRFNIDLSVADYLEAISGKTAELFALSCAIGAYESGTSRKFAEQAGKIGLAIGMAFQI 214 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 +DD+LDY + ++GK + ED + G +LP+ILA + R + + G +S Sbjct: 215 MDDILDYTQDQQKLGKPVLEDVKQGVYSLPLILALESDATRLRPLLEKR---GNLSQAEQ 271 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 F ++ + + + A Y +A ++ LP ++ + L ++ + L R Sbjct: 272 HLIFELVHDLGGVTRAQDFAKEYTDQALKLIKKLPATAERDQLAQLTETILSR 324 >gi|12055493|emb|CAC20852.1| geranyl diphosphat synthase [Quercus robur] Length = 416 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 95/302 (31%), Positives = 149/302 (49%), Gaps = 24/302 (7%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATAL---MLE--YRGDNHVL------- 66 + ++V + +Y G GKR RP +L +ATA+ +LE RG L Sbjct: 97 VVTEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATAMNISILEPSLRGPGDALTTELRAR 156 Query: 67 ---LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A E IH A+LLHDDV+DD+ RRG + V GN+ +VL GDFLLS+A + Sbjct: 157 QQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS 216 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ E + L+ V L GE Q++ + + E Y+ KTA L S + + +L+ Sbjct: 217 LKNTEVVSLLAKVVEHLVTGETMQMTTTCEQRCSMEYYMQKTYYKTASLISNSCKAIALL 276 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G + V YG NLG+A+QL+DDVLD+ G +GK D R+G T P++ A + Sbjct: 277 GGQTSEVAMLAYEYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAME 336 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 E + ++ G N+ A + ++R + A + A +++ LP+ Sbjct: 337 -----EFPQLREVVDRGFDDPANVDVALDYLGKSRGIQRARELAKKHANIAAEAIDSLPE 391 Query: 304 SS 305 S+ Sbjct: 392 SN 393 >gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63] gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08] gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07] gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08] gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07] Length = 295 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 138/249 (55%), Gaps = 19/249 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y + +GGKRLRP+LTL ++ D + A AIE IHT +L+HDD+ +D+ Sbjct: 34 EAMNYSLSAGGKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVA-----CT 139 LRRG+ V+G +L GD LL+ AF +++ + ++ L+A++ +A Sbjct: 94 LRRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGSINKENPEKYLKAINEIAKGAGIYG 153 Query: 140 LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G++ + S +K ++ + DY+H+ +KTA + + + I G + + + Y Sbjct: 154 MIGGQVVDVESENKQIEKEKLDYIHM--NKTAAMMVGCMRAGATIGGANSEQMEEITKYA 211 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 N+G++FQ+VDD+LD G+ +++GK +G D N K T P +L G + K + I+ Sbjct: 212 KNIGLSFQIVDDILDIVGDESKLGKKVGSDIENHKSTYPSLL----GLDKSKEIAHNLID 267 Query: 259 DGKISVENL 267 + K S+E L Sbjct: 268 EAKKSIEKL 276 >gi|330718944|ref|ZP_08313544.1| geranyl pyrophosphate synthase [Leuconostoc fallax KCTC 3537] Length = 255 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 123/220 (55%), Gaps = 7/220 (3%) Query: 40 SGGKRLRPMLTLA-TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 + GK +RP LTL + L E +N + L ++E +H ATL+HDD++D+S LRRG+ + + Sbjct: 25 NAGKLVRPALTLLFSELTDEAYNENAITLGASVELLHLATLIHDDIIDESKLRRGQTSIQ 84 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +G T+V GD+LL+ F ++ + + E + + + GEL Q LD+T Sbjct: 85 TRFGKDTAVYSGDYLLTGMFTLLNKVNNIEVNQYANESLKEILFGELSQKQNRYRLDMTF 144 Query: 159 EDYLHVIKSKTAVLF--SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR- 215 ++YL IK KTA LF S + S N+ R ++ G +G+ FQL+DD LD+ Sbjct: 145 DEYLLQIKGKTAALFRMSTLFGIMSRPNDEINNFRDLMQKIGETMGMTFQLLDDYLDFSE 204 Query: 216 -GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE--KNF 252 G+ +GK G+D +NG T P++ A Q TKR KNF Sbjct: 205 LGDNLALGKPTGQDIQNGIYTAPILFALQDETKRNDLKNF 244 >gi|116495626|ref|YP_807360.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC 334] gi|116105776|gb|ABJ70918.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC 334] Length = 322 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 92/289 (31%), Positives = 142/289 (49%), Gaps = 6/289 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +++ I +GGK LR L L A + D+ + AIE +H ATL+HDDV+D + LRR Sbjct: 37 LIQQQINAGGKMLRSGLMLMLARLGNPDNDDLITAGAAIEALHLATLVHDDVLDHADLRR 96 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-LEALSLVACTLAEGELRQLSLS 151 G GN+ ++ GDFL + F ++ E L + V + GE+ Q S Sbjct: 97 GSDTVSAKSGNREAIYAGDFLFAIYFQLLSEQNPATTDLATNARVMKHIFMGEVDQNGPS 156 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 L + +YL I KTA LF+ A + I + + ++A +G LG+AFQ++DD+ Sbjct: 157 APLIPSVSEYLKAIAGKTAALFALATYTGATIGQLDFTEKKAAYRFGRQLGMAFQMIDDL 216 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LDY + K + ED NG TLP+I A+Q ++ + KI+ + + A Sbjct: 217 LDYTQTTATLNKPVLEDLHNGIVTLPLIYAYQNVPEQLAPMVGTA---AKIAANSDRIAA 273 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I+ L A Y KA ++L LPD+ K+ L ++ LQR Sbjct: 274 IV--SEHGLPQARQLATRYTDKAINALAPLPDARIKQELRKLTQQLLQR 320 >gi|261415263|ref|YP_003248946.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371719|gb|ACX74464.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 334 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 6/267 (2%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NH 64 DL +++K +I++ + I D + L GKR+R L A + D + Sbjct: 17 DLVKVELDKTEQVIMQVAKNAPAGISDRLVTLFSRKGKRIRSTLLCLLANCGAQKPDIDR 76 Query: 65 VLLACA-IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 V ACA +E +H A+L+HDD++D + +RRG+ A WG Q +VL+GD++LSQ+ VI+ Sbjct: 77 VAHACAAVELLHLASLVHDDIIDGTDVRRGQKTAHREWGTQVAVLIGDYVLSQSMRCVID 136 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +++ +S A L GE+ +L ++ ++ + Y +I KTA L AA + ++ Sbjct: 137 EQARNIPVIISDAADKLIIGEIMELDHCGDMSLSRKSYNEIIDGKTAALIDAAARIGGIL 196 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDY-RGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AG + G + GIAFQ++DD+LDY G VN M K D NG TLP++ F Sbjct: 197 AGFDQPMVDECAKMGTHFGIAFQIIDDLLDYGYGSVN-MDKAKFTDLSNGLITLPLLYYF 255 Query: 243 QRGTKREKNFWKSTINDGKISVENLKK 269 + T E+ + I K S E + + Sbjct: 256 EDCTAEERREMEGFI--AKASAEGIPE 280 >gi|284992911|ref|YP_003411465.1| trans-hexaprenyltranstransferase [Geodermatophilus obscurus DSM 43160] gi|284066156|gb|ADB77094.1| Trans-hexaprenyltranstransferase [Geodermatophilus obscurus DSM 43160] Length = 352 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 90/317 (28%), Positives = 151/317 (47%), Gaps = 14/317 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + +V + + S+ + + + +L+ +GGKR RP+L L A + + G A Sbjct: 44 LGRVEEALRTAVGSEHQFVREAAGHLVAAGGKRFRPLLALLAAELGDPHGQGVTEAAVVC 103 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D++ +RRG +A W N ++L GDFL ++A ++ + E Sbjct: 104 ELTHLATLYHDDVMDEAVVRRGAPSANSRWSNSIAILTGDFLFARASDLLADLGP----E 159 Query: 132 ALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A+ + A T L G++R+ ++ D + YL V+ KT L + + + AGV Sbjct: 160 AVRIQARTFERLVTGQIRETVGAQPGDDPVDHYLDVLADKTGSLVATSARFGASFAGVDA 219 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF---QRG 245 + AL ++G +G+AFQL DD+LD GK G D R G TLP + A Sbjct: 220 ELVTALTAFGEEVGVAFQLSDDLLDIVSRDGASGKAPGTDLREGIATLPALFALAGDDPA 279 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 +R + I D E L+ ++R + AL Y +A+ L +P+ Sbjct: 280 EQRLRELVSGPITDDGEHAEALE----LLRSSAALQRATGVLREYADRAQARLSGVPEGP 335 Query: 306 WKKSLMEVVDFCLQRLN 322 + +L + D+ + R + Sbjct: 336 VRDALSALCDYVVTRTS 352 >gi|199597413|ref|ZP_03210843.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus HN001] gi|199591673|gb|EDY99749.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus HN001] Length = 322 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 6/291 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +++ I +GGK LR L L A E V AIE +H ATL+HDDV+D + +RR Sbjct: 37 LIQQQINAGGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDVLDHADIRR 96 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-LEALSLVACTLAEGELRQLSLS 151 G GN+ ++ GDFL + F ++ E + L + + + GE+ Q S Sbjct: 97 GMTTVSAESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNARIMKRIFMGEVDQNGPS 156 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 L T YL I KTA LF+ A + I + + ++A +G LG+AFQ++DD+ Sbjct: 157 APLIPTVNAYLSAISGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDL 216 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LDY + K ED NG TLP+I A+Q + K K+ + N + Sbjct: 217 LDYTQTAKTLNKPALEDLNNGIVTLPLIYAYQTVPDQLKPLTKT----AEQIAANADEIA 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 I+R++ L A++Y +A +L LP S K +L ++ LQR + Sbjct: 273 AIVRKH-GLPQAHQLAFTYTHRAIAALNPLPSSPTKAALTKLTQQLLQRTH 322 >gi|321470026|gb|EFX81004.1| hypothetical protein DAPPUDRAFT_318059 [Daphnia pulex] Length = 391 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 88/305 (28%), Positives = 152/305 (49%), Gaps = 14/305 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDN-------HVLLACAIEFIHT 76 + ++P + +Y GK +RP++TL A + Y G+N + +A +E IHT Sbjct: 92 TQATLVP-IAQYYFDGKGKAIRPVITLLMAKAINYHLGENSRNVVEKQMKIAQIVEMIHT 150 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+L+HDDVVD + RR K + VWG + S+L G++++ ++ + +S E L ++ + Sbjct: 151 ASLVHDDVVDAADSRRNKSSVNKVWGQKKSILAGNYVVGRSIEICTAIESHEVLNLITKI 210 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L GEL QL + N + + YL KTA L + + S++AG ++ + Sbjct: 211 FSELISGELMQLDGTANKEEWFDHYLEKTFKKTASLIANGCQAVSVVAGASSATQTNAFQ 270 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 +G LG+AFQLVDD+LD+ ++GK D R G T PV+ A ++ + + Sbjct: 271 FGRQLGMAFQLVDDLLDFVSTSAQLGKPAAADLRLGLATAPVLYAARKFPELNVLILRRF 330 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 G +++ AF ++ + L T+ A Y A L L S ++++L + Sbjct: 331 KEPG-----DVETAFDLVLRSDGLQRTKELAGQYCDDAVTQLAQLSPSPYQQALFTLTHE 385 Query: 317 CLQRL 321 L R+ Sbjct: 386 LLNRM 390 >gi|227509263|ref|ZP_03939312.1| possible trans-hexaprenyltranstransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191261|gb|EEI71328.1| possible trans-hexaprenyltranstransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 325 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 25/314 (7%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLACAIEFIHTA 77 +LK + + + + L+ SGGK LRP + + + D A AIE +H A Sbjct: 23 LLKAVTLSNQPVHSRILALLKSGGKLLRPGFFYIYSEFGEKIPADKLRAGAAAIELLHVA 82 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEA 132 TL+HDDV+D S LRRG +G + ++ GD+L + F V++ T Q +EA Sbjct: 83 TLIHDDVIDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLKSTHDATDLQRHIEA 142 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + T+ GEL Q++ + D++++DY H I KTA LF + E S+++ ++ Sbjct: 143 MQ----TILNGELDQMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAILTHAPRNIVT 198 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-GTKREKN 251 G+ +G A+Q+ DD+LDY G+ ++ K + ED ++G TLP+ILA Q GT+ Sbjct: 199 LGGEIGLAIGQAYQIQDDILDYGGDSSQTKKPVLEDLQSGVYTLPLILANQTAGTQLAPL 258 Query: 252 FWKSTINDGKISVENLKKA-----FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 K ++LK+A I+ ++ L A QKA + LP+ + Sbjct: 259 LGKK---------QDLKEADIKKIQKIVIKSGGLKRAHEIANQLTQKALALINRLPEQNS 309 Query: 307 KKSLMEVVDFCLQR 320 KK L + + LQR Sbjct: 310 KKELRRLTNLLLQR 323 >gi|242813946|ref|XP_002486271.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Talaromyces stipitatus ATCC 10500] gi|218714610|gb|EED14033.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Talaromyces stipitatus ATCC 10500] Length = 465 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 134/261 (51%), Gaps = 12/261 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RR +A +GN+ +VL GDFLL +A + ++ Sbjct: 208 LAEITELIHTASLLHDDVIDNAVTRRSSSSANTQFGNKMAVLAGDFLLGRASVALARLRN 267 Query: 127 QEALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEV 179 E +E L+ V L EGE QL + + D T YL KTA L S + Sbjct: 268 PEVIELLATVIANLVEGEFMQLKNTASDERSPVFTDDTITYYLQKTYLKTASLISKSCRA 327 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++L+ + +A SYG NLG+AFQLVDD+LDY E GK G D G T P++ Sbjct: 328 AALLGNSTPDIVEAAYSYGRNLGLAFQLVDDMLDYTVNSAEFGKPAGADLELGLATAPLL 387 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ + + +G VE ++ ++ R N + T A Y KA ++ Sbjct: 388 FAWKENPELGALVGRKFEQEG--DVERARE--LVARSN-GIEQTRALAQEYADKAAAAID 442 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LPDS K L+++ + ++R Sbjct: 443 ILPDSEAKNGLLDMCEKTMKR 463 >gi|194335564|ref|YP_002017358.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|194308041|gb|ACF42741.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 337 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 79/290 (27%), Positives = 147/290 (50%), Gaps = 3/290 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +Y++ GKR+RP LTL + + ++ + +A A+E +H TL+HDD++D + LR G Sbjct: 46 ARYILEGKGKRIRPFLTLLASEAVCGSSEHALNVALAVEILHNFTLIHDDIMDQAELRHG 105 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQLSL 150 + W ++L GD +++ A+ + +E +S+ E + L+ T+ EG+ + L Sbjct: 106 RPTVHRRWNTNAAILTGDMMIAYAYELALEAQSERHGELVHILNDANITICEGQALDIEL 165 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + D T DYL +I KT L SAALE + + ++L +G +G AFQ+ DD Sbjct: 166 EEKNDATIADYLDMIAKKTGRLISAALEAGGVAGDATDEQLRSLVLFGEKIGQAFQIQDD 225 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 LD E + GK G D NGK T ++ + + + +E++ I++ I + + + Sbjct: 226 YLDIMAEDGKSGKMAGGDIINGKKTYLLLRSLELTSGKERDLLNFIISNKGIEAQRVPEV 285 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I ++ L +T ++A ++ LP + ++ L + ++R Sbjct: 286 RAIYQQCGVLEETASLINRTTEEALSAIDGLPYAEGREYLKGFANILMKR 335 >gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] Length = 294 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 79/225 (35%), Positives = 123/225 (54%), Gaps = 9/225 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + VKY + GGKRLRP+L LA ++ ++ + ACAIE IHT +L+HDD+ +D+ Sbjct: 34 EAVKYSLTVGGKRLRPILCLAGCEIVGGNRNDALTPACAIEMIHTYSLIHDDLPAMDNDT 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVA-----CTLAE 142 LRRG + +G T++L GD LL++AF ++ E ++ +S +A + Sbjct: 94 LRRGHPTTWVKFGEATAILAGDALLNRAFEVLADWEFDCNRKVKVISEIARASGMLGMVL 153 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+ L DV E+ L + K KT L +A++ + G AL+ YG +LG Sbjct: 154 GQQCDLDAEGRGDVPLEELLFIHKHKTGRLITASVVSGGITGGGSPEEIDALRRYGDSLG 213 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +AFQ++DDVLD G+ ++GKN+G D GK T I ++ K Sbjct: 214 LAFQIIDDVLDVVGDQEKLGKNVGSDLEKGKTTFVTIFGVEKARK 258 >gi|308178200|ref|YP_003917606.1| trans-hexaprenyltranstransferase [Arthrobacter arilaitensis Re117] gi|307745663|emb|CBT76635.1| trans-hexaprenyltranstransferase [Arthrobacter arilaitensis Re117] Length = 365 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 4/311 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M KV L+ + + +I ++L+ +GGKR+RP+L L T+L+ E D+ + A + Sbjct: 55 MAKVEKLLRDALANSDPLIDASSRHLVEAGGKRVRPLLVLLTSLLGEGVNDDVIKAAAVV 114 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H ATL HDDV+D + +RRG A VWGN ++L GD + ++A E EA+ Sbjct: 115 ELTHLATLYHDDVMDSAPMRRGAPTAHEVWGNSVAILAGDLIFARASVFGSEL-GPEAVM 173 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 S L G+L + + D E ++ VI KTA L S + + G + Sbjct: 174 WQSRTFERLCLGQLHESIGPREGDDVIEHHIQVISDKTASLLSTSGAFGARFGGASEFI- 232 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L+ YG +G+AFQ+ DDV+D + + GK G D R G PTLP++L Q + Sbjct: 233 DVLREYGEKVGVAFQVADDVIDLASKEADSGKTPGTDLREGVPTLPILLLRQAAANGDVQ 292 Query: 252 FWKST--INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 ++ ++ S E L A + ++A+ D A + A L LP+ + K++ Sbjct: 293 AQQAIELVDADLTSDEALAAAVEAVTAHQAIHDAWKAARQWADDAIAVLAPLPEGTVKQA 352 Query: 310 LMEVVDFCLQR 320 L+ D + R Sbjct: 353 LISFADAVVTR 363 >gi|313622186|gb|EFR92727.1| polyprenyl synthetase [Listeria innocua FSL J1-023] Length = 326 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 21/321 (6%) Query: 10 KDMEKVNFLILKRICSDVEM----IPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNH 64 KD+++V L+ I S++++ + VK LI +GGK LRP L +A E+ + Sbjct: 15 KDLQEV----LQTIESNIQIRDKHVEKNVKDLIHAGGKLLRPAFALLSAQAGPEFDKERA 70 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 V +A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L C I + Sbjct: 71 VSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLF--CICFKILS 128 Query: 125 KSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++E + + + + GEL Q+ S +DVT +YL I KTA LF AL S Sbjct: 129 AHASSVENIEFNSKNIEKILMGELDQMRTSYKMDVTVREYLSRISGKTAQLF--ALSCYS 186 Query: 182 LIAGVQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 G + K Y G LG+AFQ++DDVLDY +GK + D + G +LP+I Sbjct: 187 GATGSKAPRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLI 246 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + + F ++ ++ E ++ ++ + + + A Y KA ++ Sbjct: 247 YAMKGHLAEFEPFLSQKLD---MTDEASEQVLALISKYKGVEQAFKLASKYTNKALREIK 303 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP +++ + + L R Sbjct: 304 KLPAGAYRDDMYRLTKSILDR 324 >gi|189345859|ref|YP_001942388.1| Polyprenyl synthetase [Chlorobium limicola DSM 245] gi|189340006|gb|ACD89409.1| Polyprenyl synthetase [Chlorobium limicola DSM 245] Length = 332 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 85/296 (28%), Positives = 149/296 (50%), Gaps = 15/296 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +Y+I GKR+RP LTL + + +N + A A+E +H TL+HDD++D + LR G Sbjct: 41 ARYIIEGKGKRIRPFLTLLASESVCGSSENALNAALAVEILHNFTLMHDDIMDAADLRHG 100 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQLSL 150 + A W ++L GD +++ A+ + +++K++ E + L+ T+ EG+ + L Sbjct: 101 RPAVHKQWNTNVAILSGDMMIAYAYELALQSKTERHRELIHILNHANITICEGQALDMEL 160 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + T DYL +I KT L SAALE + AL ++G +G AFQ+ DD Sbjct: 161 ELKKNATISDYLDMIAKKTGRLISAALEAGGVAGNGTQEQLNALVTFGEKIGRAFQIQDD 220 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS---VENL 267 LD E + GK G D NGK T ++ + + + +K +S I++ I V + Sbjct: 221 FLDIMAEDGKSGKIPGGDVINGKKTYLLLRSIELTSATDKELLQSVIDNNGIGADRVSEV 280 Query: 268 KKAF---IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 K+ + ++ E RA+++ + + A +L LP + ++ L ++R Sbjct: 281 KEIYERCGVLDEARAMINQDT------EDALAALESLPYAEGREYLSGFAGILMKR 330 >gi|4580645|gb|AAD24462.1|AF118855_1 trans-prenyltransferase [Mus musculus] gi|20071107|gb|AAH26820.1| Pdss1 protein [Mus musculus] Length = 336 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + D+ +Y GK RP++ + A +N Sbjct: 19 LGWRDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNARE 78 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTATL+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 79 MQASQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASV 138 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 139 ALARIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 198 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 199 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVL 258 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G ++ +A + ++ + T Y A Y KA +R Sbjct: 259 FACQQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIR 313 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S+ + +L+++ + L R Sbjct: 314 KLRPSTERDALIQLSESVLTR 334 >gi|220929321|ref|YP_002506230.1| polyprenyl synthetase [Clostridium cellulolyticum H10] gi|219999649|gb|ACL76250.1| Polyprenyl synthetase [Clostridium cellulolyticum H10] Length = 294 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 123/236 (52%), Gaps = 17/236 (7%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C D+E + Y + +GGKRLRP+L LA A M + D + CAIE IHT +L+HDD Sbjct: 29 CLDIEQ---AMSYSLLAGGKRLRPVLALAVAEMFDKPFDEVINFGCAIEMIHTYSLIHDD 85 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETKSQEALEALSLVA 137 + +D+ RRGK+ V+G ++L GD LL+ A+ ++I E+++ E + A +VA Sbjct: 86 LPAMDNDDYRRGKLTNHKVFGEAMAILAGDGLLNMAYEIMINDAVESRNIEKMRAAGIVA 145 Query: 138 -----CTLAEGELRQLSLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVR 191 + G++ + L E D L + + KT L A +E +++I G Sbjct: 146 KYAGALGMVGGQV--IDLQSEEKTIESDRLKTMHRLKTGALIKAPVEAAAVICGADKKEF 203 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + L Y NLG+AFQ+ DD+LD G V MGKN G D K T + + K Sbjct: 204 ELLSGYAANLGLAFQIKDDILDIEGTVENMGKNPGNDSSCHKSTYVTMYGLEESKK 259 >gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211] gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211] Length = 300 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 79/231 (34%), Positives = 127/231 (54%), Gaps = 14/231 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + +GGKRLRP+L LA ++ + + A AIE IHT +L+HDD+ +D+ Sbjct: 40 EAMRYSLLAGGKRLRPILCLAACELIAGESETALPTAVAIEMIHTMSLIHDDLPSMDNDD 99 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-------ALSLVACT--L 140 LRRG+ V+G+ ++L GD LL++AF MV + E LSLVA L Sbjct: 100 LRRGRPTNHKVYGDALAILAGDALLTRAFEMVSLRSPGISAERLIKVVGELSLVAGAPGL 159 Query: 141 AEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G++ L K++D+ +Y+H+ KT L A++ +LI G ++ + AL++Y Sbjct: 160 VGGQVADLECEGKDVDIDTLEYIHI--HKTGALLKASVVCGALIGGAKDDLLDALRTYAE 217 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +G+AFQ++DD+LD +GK G+D K T P +L +R K Sbjct: 218 AIGLAFQIIDDILDVTSSSEVLGKTAGKDLIADKTTYPKLLGVDESRQRAK 268 >gi|240103297|ref|YP_002959606.1| Polyprenyl synthetase [Thermococcus gammatolerans EJ3] gi|239910851|gb|ACS33742.1| Polyprenyl synthetase [Thermococcus gammatolerans EJ3] Length = 309 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 81/236 (34%), Positives = 131/236 (55%), Gaps = 6/236 (2%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 + ME ++ +++ + VE+ + +Y+I SGGKR+RP +TLA + L ++ + LA Sbjct: 1 MSSMESLDERLVEALEGSVELAKKIGEYIIRSGGKRIRPRITLAVSKGLGLDENDALDLA 60 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 AIE IHTA+L+HDDV+D + RR + WG + +VL GDFL +A +I K Sbjct: 61 SAIELIHTASLVHDDVIDLAEKRRNNPTVVMRWGPELAVLSGDFLFVRA-LRIIAKKKAA 119 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ ++ + +GE+ Q ++ ++ + + Y +I KT LF AA + + ++ Sbjct: 120 MVDYVAKAVEDMVKGEILQEAVRGSVHLDLDTYYEIIDRKTGKLFGAAFALPAYY--LEK 177 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L G +G AFQ+VDDVLDY GK+ +D NGK TLP+IL +R Sbjct: 178 PYWMELDKAGTLVGRAFQIVDDVLDY---FPGTGKDRFKDLLNGKATLPLILYTER 230 >gi|291303388|ref|YP_003514666.1| trans-hexaprenyltranstransferase [Stackebrandtia nassauensis DSM 44728] gi|290572608|gb|ADD45573.1| Trans-hexaprenyltranstransferase [Stackebrandtia nassauensis DSM 44728] Length = 322 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 88/294 (29%), Positives = 143/294 (48%), Gaps = 14/294 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + +++ +GGKR RPML++ A + + + +E H ATL HDDV+D++A+R Sbjct: 36 EAASHVLKAGGKRFRPMLSVTAAHFGDPDAHGVIESSLVMELTHLATLYHDDVMDEAAMR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-LSL 150 RG +A W N ++L GD+L + A +V E S E + + L G++ + + Sbjct: 96 RGAPSANSRWSNSIAILSGDYLFAVASELVAELGS-ETVREQARTFSRLVHGQIAETVGP 154 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + +D + YL V+ KT L + A + + AG SV A+ YG +G+AFQL DD Sbjct: 155 PEGVDPVDW-YLRVLTDKTGSLIATAARLGAQFAGAPTSVVDAVAEYGETIGVAFQLSDD 213 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF----WKSTINDGKISVEN 266 +LD + + GK G D G PTLPV+ A Q G K + Sbjct: 214 LLDIASDGDTSGKVQGLDLMEGIPTLPVLYA-QVGDDTSPRLRELVSKPVAQEDLEETLE 272 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 L ++ M++ R +D +G++AK LP S + +L + D+ + R Sbjct: 273 LLRSSAAMKQARKTLD------EFGERAKAVAGSLPAGSTRDALTGMCDYMVAR 320 >gi|310658649|ref|YP_003936370.1| geranyltranstransferase [Clostridium sticklandii DSM 519] gi|308825427|emb|CBH21465.1| geranyltranstransferase [Clostridium sticklandii] Length = 295 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 79/239 (33%), Positives = 132/239 (55%), Gaps = 18/239 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 +KY + +GGKRLRP+L L T +L + + +ACAIE IHT +L+HDD+ +D+ +LR Sbjct: 36 MKYSVQAGGKRLRPILFLETIKLLNKNPFDFIEIACAIEMIHTYSLIHDDLPAMDNDSLR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL----------VACTLA 141 RGK +V+G T++L GD LL+ A ++I S++ + + +A Sbjct: 96 RGKPTNHVVFGEATAILAGDGLLNLAHEIMIAFVSKKLTKNNINGINIISKAAGINGMIA 155 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + S K++D+ ++H +KT L A++ +++++ ++ ALK+Y + Sbjct: 156 GQAVDIESEGKSIDIDTMKFIH--SNKTGALIEASIVAAAVMSDADDTRIAALKTYAKYI 213 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 G+AFQ+ DD+LD G E+GK IG D N K T P G ++ K + K+TI + Sbjct: 214 GLAFQITDDILDIEGNEAELGKKIGSDELNDKATYPKYF----GLEKSKEYAKNTITNA 268 >gi|120437409|ref|YP_863095.1| isoprenyl synthetase [Gramella forsetii KT0803] gi|117579559|emb|CAL68028.1| isoprenyl synthetase [Gramella forsetii KT0803] Length = 324 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 117/218 (53%), Gaps = 5/218 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GGKRLRP+L L + + + A AIE H +L+HDD++DD+ LRRGK Sbjct: 33 YILEQGGKRLRPVLVLMATEIFDCNYKKALDAALAIEIFHNFSLVHDDIMDDAPLRRGKE 92 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV----ACTLAEGELRQLSLS 151 W T +L GD +L A+ + E+ + + LS + A + EG+ + Sbjct: 93 TVHEKWDINTGILSGDAMLINAY-QLFESYEGDTFKELSKLFTKTAIEVCEGQQYDIDFE 151 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 +V+ E+YL +I+ KTAVL A+L++ +++A + ++A+ YG LGIAFQL DD Sbjct: 152 TRDNVSIENYLKMIEYKTAVLVGASLQMGAIVAQTSTACKEAIYQYGRLLGIAFQLQDDY 211 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 LD G+ GK +G D K T + + T+ E Sbjct: 212 LDAFGDPETFGKQLGGDIIENKKTFLYLKTLELATRNE 249 >gi|54027096|ref|YP_121338.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM 10152] gi|54018604|dbj|BAD59974.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM 10152] Length = 345 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 88/315 (27%), Positives = 157/315 (49%), Gaps = 9/315 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA-CA 70 +E+V L++ + + + D +L +GGKR RP+ T+ T + D ++ A Sbjct: 36 LEEVEKLLIAELSDGEDFLQDAALHLAKAGGKRFRPLFTILTGQLGPRPTDPALITAGTV 95 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H ATL HDDV+D++ +RRG + WGN ++L GD+L + A + S Sbjct: 96 VELVHLATLYHDDVMDEATMRRGAPSVNSRWGNNIAILAGDYLFAHASRLT----STLGP 151 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A+ ++A T AE G++R+ ++ E YL V+ KT L +AA +G Sbjct: 152 DAVRIIAETFAELVTGQMRETMGARESQDPVEHYLRVVWEKTGSLIAAAGRFGGTFSGAD 211 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + L G +G AFQ+ DD++D + GK G D R G TLPV+ A R Sbjct: 212 TAHIERLARLGDAVGTAFQISDDIIDISSASEQSGKTPGTDLREGVHTLPVLYAL-REEG 270 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 E + ++ ++ S + + +A ++ ++ +V + + SY +A L LP Sbjct: 271 AEADRLRTLLDHPLHSDDEVAEALELLGRSQGMVLAKEKLQSYADQAYAELAALPSGPAN 330 Query: 308 KSLMEVVDFCLQRLN 322 +L ++V + ++R+ Sbjct: 331 DALEQLVRYTIERVG 345 >gi|133777361|gb|AAI07275.2| Pdss1 protein [Mus musculus] Length = 385 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + D+ +Y GK RP++ + A +N Sbjct: 68 LGWRDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNARE 127 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTATL+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 128 MQASQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASV 187 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 188 ALARIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 247 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 248 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVL 307 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G ++ +A + ++ + T Y A Y KA +R Sbjct: 308 FACQQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIR 362 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S+ + +L+++ + L R Sbjct: 363 KLRPSTERDALIQLSESVLTR 383 >gi|16804679|ref|NP_466164.1| hypothetical protein lmo2641 [Listeria monocytogenes EGD-e] gi|224503563|ref|ZP_03671870.1| hypothetical protein LmonFR_13848 [Listeria monocytogenes FSL R2-561] gi|254829090|ref|ZP_05233777.1| polyprenyl synthetase [Listeria monocytogenes FSL N3-165] gi|255025739|ref|ZP_05297725.1| hypothetical protein LmonocytFSL_04305 [Listeria monocytogenes FSL J2-003] gi|284800473|ref|YP_003412338.1| hypothetical protein LM5578_0219 [Listeria monocytogenes 08-5578] gi|284993659|ref|YP_003415427.1| hypothetical protein LM5923_0219 [Listeria monocytogenes 08-5923] gi|16412129|emb|CAD00719.1| lmo2641 [Listeria monocytogenes EGD-e] gi|258601501|gb|EEW14826.1| polyprenyl synthetase [Listeria monocytogenes FSL N3-165] gi|284056035|gb|ADB66976.1| hypothetical protein LM5578_0219 [Listeria monocytogenes 08-5578] gi|284059126|gb|ADB70065.1| hypothetical protein LM5923_0219 [Listeria monocytogenes 08-5923] Length = 326 Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/317 (30%), Positives = 155/317 (48%), Gaps = 13/317 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLA 68 KD+++V I K I + + VK LI +GGK LRP L +A +Y D V +A Sbjct: 15 KDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVSIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H ATL+HDDVVDDS LRRG +G +V GD+L C I + Sbjct: 75 AALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHAS 132 Query: 129 ALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++E + + + + GEL Q+ S ++VT +YL I KTA LF AL S G Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLF--ALSCYSGATG 190 Query: 186 VQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + K Y G LG+AFQ++DDVLDY +GK + D + G +LP+I A + Sbjct: 191 SKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 250 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + ++ ++ E ++ ++ + + + A Y KA ++ LP Sbjct: 251 GHLAEFEPLLSQKLD---MTDEASEQVLALISKYKGVEQAFKLAKKYTNKALREIKKLPA 307 Query: 304 SSWKKSLMEVVDFCLQR 320 ++++ + + L R Sbjct: 308 GAYREDMYRLTKNILDR 324 >gi|133777358|gb|AAI07274.2| Pdss1 protein [Mus musculus] Length = 383 Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + D+ +Y GK RP++ + A +N Sbjct: 66 LGWRDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNARE 125 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTATL+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 126 MQASQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASV 185 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 186 ALARIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 245 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 246 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVL 305 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G ++ +A + ++ + T Y A Y KA +R Sbjct: 306 FACQQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIR 360 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S+ + +L+++ + L R Sbjct: 361 KLRPSTERDALIQLSESVLTR 381 >gi|298372651|ref|ZP_06982641.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058] gi|298275555|gb|EFI17106.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058] Length = 318 Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 74/233 (31%), Positives = 118/233 (50%), Gaps = 3/233 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y + SGGKRLRPML M + A AIE H TLLHDD++DDS RR Sbjct: 25 IEYTLDSGGKRLRPMLVAIACEMFGKSSETVENAAVAIEIFHNFTLLHDDLMDDSPTRRN 84 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLVACTLAEGELRQLSL 150 K + W T++L GD +L +A+ + E + L + A + EG+ + Sbjct: 85 KPTVHVKWNANTAILSGDAMLIKAYEFLAKIPEKYWAKVLPVFTQTALEVCEGQQFDMDF 144 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 +VT ++Y +I+ KTAVL + +L+ ++IA ++ + G+ +G+AFQL DD Sbjct: 145 ETKDNVTIDEYFRMIRLKTAVLLACSLKTGAIIADASERDQRLIYDLGIAIGMAFQLKDD 204 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 LD G +GK IG+D K T ++ A ++ ++ +N I+ Sbjct: 205 YLDTYGTFETLGKRIGDDILCRKKTFLLLTALNNADGNQREHLRTILNSTSIA 257 >gi|30468171|ref|NP_849058.1| prenyl transferase [Cyanidioschyzon merolae strain 10D] gi|30409271|dbj|BAC76220.1| prenyl transferase [Cyanidioschyzon merolae strain 10D] Length = 315 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 80/243 (32%), Positives = 127/243 (52%), Gaps = 6/243 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MK++ +L ++ + LI R + + +GGKR+RP L + L Sbjct: 1 MKLISELLAQNERHIQRLIQSRHALLSAAAAHLFQ----AGGKRIRPTFVLLVSQALGGI 56 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA E IHTA+LLHDDVVD+++ RRG + N+ +VL GDFL +Q+ Sbjct: 57 SQSQQRLAEITEMIHTASLLHDDVVDEASKRRGIDTVNTRFSNRIAVLAGDFLFAQSSWY 116 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + E ++ +S + LAEGE+RQ S + YL KTA LF+ + + + Sbjct: 117 LANLNNLEVVKFISKLISDLAEGEMRQTSTQFSTQFELWAYLEKSFYKTASLFACSAKAT 176 Query: 181 SLIAGVQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 +++ Y G +LGIAFQ++DDVLD G++++MGK + DF +G T P+ Sbjct: 177 CMLSNDHEDNHHHKNMYLLGQHLGIAFQIMDDVLDISGDISQMGKTLSADFVSGNLTAPI 236 Query: 239 ILA 241 + A Sbjct: 237 LFA 239 >gi|260363971|ref|ZP_05776710.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus K5030] gi|308112584|gb|EFO50124.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus K5030] Length = 195 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 69/191 (36%), Positives = 108/191 (56%), Gaps = 1/191 (0%) Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ +++ Sbjct: 4 LQLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEH 63 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A + T Sbjct: 64 VELALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHAMRNTTPEN 123 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + I +E L + +M+E +L T +A KA L LP+S +K++ Sbjct: 124 ALMIREAIEKAN-GMERLDEILAVMKEAGSLEYTTQKALEEADKAIAELEVLPESEYKEA 182 Query: 310 LMEVVDFCLQR 320 L+ + ++R Sbjct: 183 LITLAHVAVKR 193 >gi|320531898|ref|ZP_08032809.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337] gi|320135889|gb|EFW27926.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337] Length = 368 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 95/328 (28%), Positives = 160/328 (48%), Gaps = 21/328 (6%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE---YR 60 LE + ++ + +++ + S E I +L +GGKRLRP+L L TA + + Sbjct: 12 LESRIIPALQTIEDRLMEVVTSADETINPPTSHLAEAGGKRLRPVLALLTAQLGDPALAT 71 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ A+E H ATL HDDV+D++ LRRG +A+ VWGN ++L GD L+++A Sbjct: 72 GEQIRDAGVAVELTHIATLYHDDVMDEAPLRRGAPSAQTVWGNSAAILTGDVLVARA-SQ 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ S EA+ A + L G+L + L D + Y+ V+ KT L + + Sbjct: 131 LVAALSPEAVMAHAKTFERLCMGQLHETLPRPSGTDPVDH-YIQVLADKTGSLIAVSARY 189 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++ Q ++ +G +G+AFQL DDV+D + GK G D R G T+PV+ Sbjct: 190 GAMLTDAGVRTEQIVEEFGERIGVAFQLADDVIDLMSDSATTGKTPGTDLREGVDTMPVL 249 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFII------MRENRALVDTEYRAYSYGQK 293 L + E + I ++S +L ++ +RE+ L T A ++ + Sbjct: 250 LLRKALAAGELDAAGQAILS-RLSTGDLSDDAVLADVVARLREHPVLTRTREMATAWAAQ 308 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A + L+ L ++ V+D QRL Sbjct: 309 AVEGLKGLEEA--------VLDGTRQRL 328 >gi|215429394|ref|ZP_03427313.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis EAS054] gi|289752601|ref|ZP_06511979.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis EAS054] gi|289693188|gb|EFD60617.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis EAS054] Length = 335 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 91/301 (30%), Positives = 159/301 (52%), Gaps = 17/301 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 E++ D + +L +GGKR RP+ T+ +A + + + IE IH ATL HDDV+D Sbjct: 42 EVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMD 101 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---G 143 ++ +RRG +A WGN ++L GD+LL+ A +V ++ EA+ ++A T A+ G Sbjct: 102 EAQVRRGAPSANAQWGNNVAILAGDYLLATASRLV----ARLGPEAVRIIADTFAQLVTG 157 Query: 144 ELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 ++R+ S+N+D ++ YL V++ KT L AA + + +G + + L G +G Sbjct: 158 QMRETRGTSENVDSIKQ-YLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVG 216 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK---REKNFWKSTIND 259 AFQ+ DD++D E +E GK G D R G TLP++ A + R + ++D Sbjct: 217 TAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRALLNGPVDD 276 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 +++A ++R + + + Y +A+ L LPD +++L +VD+ + Sbjct: 277 DA----EVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALVDYTVS 332 Query: 320 R 320 R Sbjct: 333 R 333 >gi|149278033|ref|ZP_01884172.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter sp. BAL39] gi|149231231|gb|EDM36611.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter sp. BAL39] Length = 322 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 115/200 (57%), Gaps = 7/200 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 + Y++ GGKR+RP L L +A + + D H ++ A AIE H TL+HDD++D++ LR Sbjct: 31 ISYIMSLGGKRIRPALVLMSADL--FAADVHQVMPAALAIETFHNFTLIHDDIMDNAPLR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQA---FCMVIETKSQEALEALSLVACTLAEGELRQL 148 RGK WG ++L GD ++ +A M+ ++ALE + A + EG+ + Sbjct: 89 RGKATVHEKWGVNNAILSGDVMMVEANKHLAMLDAAVLKDALETFNSTAQGVCEGQQLDM 148 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 V+ +Y+++I+ KTAVL A+++ + +A S + L ++G NLGIAFQL Sbjct: 149 EFESRDQVSIPEYINMIRLKTAVLLGGAMKLGAQVARATKSQAEQLYAFGENLGIAFQLQ 208 Query: 209 DDVLDYRGEVNEMGKNIGED 228 DD+LD G+ + GK +G D Sbjct: 209 DDILDVYGDPEKFGKQVGGD 228 >gi|225020305|ref|ZP_03709497.1| hypothetical protein CORMATOL_00308 [Corynebacterium matruchotii ATCC 33806] gi|224947049|gb|EEG28258.1| hypothetical protein CORMATOL_00308 [Corynebacterium matruchotii ATCC 33806] Length = 343 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 32/336 (9%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDV----VKYLIFSGGKRLRPMLTL-ATALM 56 + L + L+ ME V R+ ++E PD V +L +GGKR RPM TL A+ Sbjct: 25 ETLNEHVLRGMENVE----DRLRVELEKSPDFLQEKVMHLTKAGGKRFRPMFTLLASNYG 80 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 ++ A +E H ATL HDDV+D++ +RRG +A + W N ++L GD LL+ Sbjct: 81 PRPMCEDVFKAAVVVEMTHLATLYHDDVMDEAQMRRGVPSANMRWSNSVAILSGDILLAH 140 Query: 117 AFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173 A ++ S+ ++ ++ A T L G++R+ D E Y+ VI KT VL Sbjct: 141 ASRIM----SELGVDTVAHFAETFGALVTGQMRETEGPGTGDPIEH-YMKVINEKTGVLI 195 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 +AA + +L +G L++ G +G+ FQ+VDD++D + GK G D R G Sbjct: 196 AAAGYLGALHSGADMETAVCLQAVGTAVGMVFQIVDDIIDIFSTPEDSGKTPGTDLREGV 255 Query: 234 PTLPVILAFQR----GTKREKNFWKSTINDGKISVENLKKAFIIMREN---RALVDTEYR 286 TLPV+ A Q G + + ++D + + ++ R N +AL D Sbjct: 256 FTLPVLYALQEDTPVGAELRELLTGPLVDDASVD----RALQLLARSNGRQKALADV--- 308 Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 + Y +A++ L LPD+ ++L ++ + R+ Sbjct: 309 -HQYLAEAEEKLDQLPDNPTTRALRQLARVTVARVG 343 >gi|296415815|ref|XP_002837581.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633454|emb|CAZ81772.1| unnamed protein product [Tuber melanosporum] Length = 343 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 20/269 (7%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTATLLHDDV+D + RRG +A + GN+ S+L GD++L +A + ++ Sbjct: 78 LAEIVELIHTATLLHDDVLDQAETRRGNPSANSLSGNKLSILAGDYMLGRASVYLARLRN 137 Query: 127 QEALEALSLVACTLAEGELRQL---------------SLSKNLDVTEEDYLHVIKSKTAV 171 E +E L+ V L +GEL QL S +L + E YL K+A Sbjct: 138 PEVIELLAEVIAELVKGELLQLQNTATGTTADFTSKSSREAHLRDSLEYYLEKTYLKSAS 197 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L S + ++++ G V SYG +LG+AFQLVDDVLDY +++GK G D Sbjct: 198 LISKSCRATAVLGGATEDVAAKAYSYGRHLGLAFQLVDDVLDYTSSNDQIGKPAGADLEL 257 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 G T PV A + + + + DG + +KA ++ ++ + T A S+ Sbjct: 258 GLATAPVFYACEEFGELGELIERRFCLDG-----DAEKARALVHKSNGIDRTLALAGSFC 312 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A+ ++ P S K L EV++ L R Sbjct: 313 DTARQAISSFPPSEAKDGLEEVLEMVLTR 341 >gi|300117458|ref|ZP_07055248.1| heptaprenyl diphosphate synthase component II [Bacillus cereus SJ1] gi|298725293|gb|EFI65945.1| heptaprenyl diphosphate synthase component II [Bacillus cereus SJ1] Length = 269 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 82/267 (30%), Positives = 138/267 (51%), Gaps = 12/267 (4%) Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 +Y+ D +A A+E IH A+L+HDDV+D + LRRG WG++ ++ GD+L +++ Sbjct: 9 DYKLDAIKHVAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKS 68 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + EA +ALS + +GE+ Q+ N D YL IK KTA+L +A+ Sbjct: 69 LECITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASC 128 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ ++ AG L YG +G+++Q++DD+LD+ ++GK G D G TLP Sbjct: 129 QLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLP 188 Query: 238 VILAFQRG--TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS--YGQK 293 + A + K+ K+ ++T D K I +N A +D + A+S Y K Sbjct: 189 ALYAMEDPILCKKIKSVHENTTADE-------MKEIIEAVKNSAAIDKAF-AFSERYLHK 240 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A + ++ LP K +L V + +R Sbjct: 241 ALEMIKPLPRGQAKYALQNVAKYIGKR 267 >gi|224499314|ref|ZP_03667663.1| polyprenyl synthetase [Listeria monocytogenes Finland 1988] Length = 326 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/240 (37%), Positives = 126/240 (52%), Gaps = 10/240 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLA 68 KD+++V I K I + + VK LI +GGK LRP L +A +Y D V +A Sbjct: 15 KDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVSIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H ATL+HDDVVDDS LRRG +G +V GD+L C I + Sbjct: 75 AALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHAS 132 Query: 129 ALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++E + + + + GEL Q+ S ++VT +YL I KTA LF AL S G Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLF--ALSCYSGATG 190 Query: 186 VQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + K Y G LG+AFQ++DDVLDY +GK + D + G +LP+I A + Sbjct: 191 SKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 250 >gi|217966160|ref|YP_002351838.1| polyprenyl synthetase [Listeria monocytogenes HCC23] gi|217335430|gb|ACK41224.1| polyprenyl synthetase [Listeria monocytogenes HCC23] gi|307572230|emb|CAR85409.1| polyprenyl synthase, component II [Listeria monocytogenes L99] Length = 326 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/240 (37%), Positives = 126/240 (52%), Gaps = 10/240 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLA 68 KD+++V I K I + + VK LI +GGK LRP L +A +Y D V +A Sbjct: 15 KDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVSIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H ATL+HDDVVDDS LRRG +G +V GD+L C I + Sbjct: 75 AALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHAS 132 Query: 129 ALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++E + + + + GEL Q+ S ++VT +YL I KTA LF AL S G Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLF--ALSCYSGATG 190 Query: 186 VQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + K Y G LG+AFQ++DDVLDY +GK + D + G +LP+I A + Sbjct: 191 SKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 250 >gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515] gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515] Length = 300 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/233 (33%), Positives = 128/233 (54%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ + ++Y + +GGKR+RP+L LA+ + V A AIE IHT +L+HDD+ + Sbjct: 36 EILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSLVAC 138 D+ LRRG+ V+G+ ++L GD LL++AF MV + + LSLVA Sbjct: 96 DNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPNRLLNVIGELSLVAG 155 Query: 139 T--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L K +D+ +Y+H+ KT L A + ++IAG + + +AL Sbjct: 156 APGLVGGQVVDLECEGKEVDLETLEYIHL--HKTGALLKACVRTGAMIAGANDELLKALT 213 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +Y +G+AFQ++DD+LD ++GK G+D K T P +L + KR Sbjct: 214 TYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLGMEESKKR 266 >gi|119872709|ref|YP_930716.1| polyprenyl synthetase [Pyrobaculum islandicum DSM 4184] gi|119674117|gb|ABL88373.1| Polyprenyl synthetase [Pyrobaculum islandicum DSM 4184] Length = 334 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 88/311 (28%), Positives = 160/311 (51%), Gaps = 20/311 (6%) Query: 27 VEMIPDV---VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 +++ PD V Y I +GGKRLRP+LTLA A + + + + A +E IH +L++DD Sbjct: 25 IDVAPDFREEVLYQIKTGGKRLRPLLTLAIAEAVSGQWEPALPAATIVELIHNYSLIYDD 84 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAE 142 ++D +RRG R +G+ ++L+G + V++T + ++ V + E Sbjct: 85 IIDRGDVRRGMPTVRKAFGDNAAILIGIWYREAIEEAVLDTPKPLVFAKEVAKVIKAIDE 144 Query: 143 GELRQLSL------------SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 GE + ++ DVT EDY+H++ KT VL +AA + L + Sbjct: 145 GERLDILFEYAGRDDPYFIKARKRDVTVEDYIHMVSLKTGVLIAAAAKWGVLSVSDSKEL 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI-LAFQRGTKRE 249 + ++G+N GIAFQ++DDVLD G+ + GK IG+D + K V+ +A + + Sbjct: 205 AETAWNFGLNAGIAFQIIDDVLDIYGDPKKFGKEIGKDIKEHKRGNAVVAIALSKLPHSD 264 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + S ++ ++ ++K A ++ +A + A Y ++A+ L +P++ + Sbjct: 265 RERLLSILSKAEVGEADIKNAVALLDSVKAREEALSLAEKYRREAERYLENIPNNG---T 321 Query: 310 LMEVVDFCLQR 320 L E++DF L+R Sbjct: 322 LKELLDFILER 332 >gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630] gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26] gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932] gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42] gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255] gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55] gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34] gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79] gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196] gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291] gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58] gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile] gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196] gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291] Length = 295 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 137/249 (55%), Gaps = 19/249 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y + +GGKRLRP+LTL ++ D + A AIE IHT +L+HDD+ +D+ Sbjct: 34 EAMNYSLSAGGKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVA-----CT 139 LRRG+ V+G +L GD LL+ AF +++ + ++ L+A++ +A Sbjct: 94 LRRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGSINKENPEKYLKAINEIAKGAGIYG 153 Query: 140 LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G++ + S +K ++ + DY+H+ +KTA + + + I G + + + Y Sbjct: 154 MIGGQVVDVESENKQIEKEKLDYIHM--NKTAAMMVGCMRAGATIGGANSEQMEEITKYA 211 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 N+G++FQ+VDD+LD G+ ++GK +G D N K T P +L G + K + I+ Sbjct: 212 KNIGLSFQIVDDILDIVGDEAKLGKKVGSDIENHKSTYPSLL----GLDKSKEIAHNLID 267 Query: 259 DGKISVENL 267 + K S+E L Sbjct: 268 EAKKSIEKL 276 >gi|170587658|ref|XP_001898591.1| Polyprenyl synthetase family protein [Brugia malayi] gi|158593861|gb|EDP32455.1| Polyprenyl synthetase family protein [Brugia malayi] Length = 394 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/288 (29%), Positives = 145/288 (50%), Gaps = 21/288 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATA----------LMLEYRGD----NHVLLACAIEFIHTA 77 ++ KY GGK RP + L A ++++ D N +A E IHTA Sbjct: 92 EMAKYYFDQGGKLFRPTICLLMARACNQFEPKSMLVDSGRDTVTRNQYKIAVISEMIHTA 151 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +L+HDDV+D + +RRG +WGN+ +VLVGDF+L++A ++ + ++ + Sbjct: 152 SLVHDDVIDKADIRRGSRTINALWGNKMAVLVGDFILARATQVLCSIGRPSVISVMATII 211 Query: 138 CTLAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L +GE Q++ +L+ T+ Y+ SKTA LF+ + + +++++ V + + Sbjct: 212 EDLVKGEFMQMNDGTDLNATQRFNKYMAKTYSKTASLFANSCKSAAMLSDVSEADELSAY 271 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 YG +LGIAFQ++DD+LDY + GK D + G T PV+ A + + K +S Sbjct: 272 EYGKSLGIAFQMIDDLLDYVSTSSVTGKPTANDLKLGLATAPVLFAAEEYPELNKLITRS 331 Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 +G I + A+ I+ + L T A + + A +R P+ Sbjct: 332 FSKEGDIEL-----AWEIVGNSTGLQKTRTAAREHAEHAVKMVRNFPN 374 >gi|11322972|emb|CAC16851.1| geranyl diphosphate synthase [Citrus sinensis] Length = 321 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 93/302 (30%), Positives = 146/302 (48%), Gaps = 24/302 (7%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALMLEYRGDNH-------------- 64 + ++V + +Y G GKR RP +L +ATAL + H Sbjct: 2 VIAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDASATELRTR 61 Query: 65 -VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A E IH A+LLHDDV+DD+ RRG + V GN+ +VL GDFLLS+A + Sbjct: 62 QQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS 121 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ E + L+ V L GE Q++ S + + + Y+ KTA L S + + +L+ Sbjct: 122 LKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALL 181 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V YG NLG+A+QL+DDVLD+ G +GK D R+G T P++ A + Sbjct: 182 AGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAME 241 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 E ++ + G N+ A + ++R + T A + A ++ LP+ Sbjct: 242 -----EFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPE 296 Query: 304 SS 305 ++ Sbjct: 297 NN 298 >gi|281491887|ref|YP_003353867.1| Heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. lactis KF147] gi|281375598|gb|ADA65104.1| Heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. lactis KF147] Length = 319 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 145/296 (48%), Gaps = 23/296 (7%) Query: 34 VKYLIF----SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 VK IF +GGK LRP L + + + LA ++E +H ATL+HDDV+D + Sbjct: 36 VKSAIFDIFDAGGKMLRPAYLLLFSGFTVLSENERLALAASVEMMHIATLVHDDVIDHAD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----LAEGE 144 RRG +G + +V GD+L F V S+ +LE +L L GE Sbjct: 96 TRRGVATLSAKYGPEIAVYAGDYL----FIAVFRLMSEHSLELSNLTKNIGSIERLLGGE 151 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L QL+ NL T +DY+ I KT LF+ + V+ LI+ ++A K GMN+GI+ Sbjct: 152 LGQLNHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNTLTKRAYK-IGMNIGIS 210 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ++DD LDY +GK + ED + G + PV+ A Q E N S + I Sbjct: 211 FQIMDDYLDYASTAQTLGKPVLEDIKQGIYSAPVLFALQ-----ENNALVSEL----IKN 261 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E + + ++ + AL T+ A SY A + + LP ++ + E+ L+R Sbjct: 262 EKFDEVYDFIKTSDALEKTKALAKSYTLSALNLIDKLPKGKNRELIAEITRKLLER 317 >gi|212693605|ref|ZP_03301733.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855] gi|237708764|ref|ZP_04539245.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237724205|ref|ZP_04554686.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265755969|ref|ZP_06090436.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212663858|gb|EEB24432.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855] gi|229437393|gb|EEO47470.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229457190|gb|EEO62911.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263234047|gb|EEZ19648.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 325 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/231 (33%), Positives = 125/231 (54%), Gaps = 6/231 (2%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP+L L + + + D+ + A IE H TLLHDD++D + +RR Sbjct: 32 IEYVLSLGGKRIRPVLMLLSYQLYKENVDDILSQAAGIETYHNYTLLHDDLMDRADMRRN 91 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV---IETKSQEALEALSLVACTLAEGELRQLSL 150 K VW T++L GD +L A+ ++ ++ ++ ++ S A + EG+ + Sbjct: 92 KPTVHKVWDENTAILSGDAMLVLAYRLMNNCPDSYLKQVMDIFSQTALEICEGQQWDMEF 151 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DVT +Y+ +I+ KT+VL SAAL++ +++ Q L +G+ +G+AFQL DD Sbjct: 152 ETRSDVTVSEYIEMIRLKTSVLLSAALKIGAVLGDASEEDAQKLYDFGIKMGLAFQLQDD 211 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRGTKR-EKNFWKSTIN 258 LD G GKNIG D K T +I L G +R E W S+ + Sbjct: 212 FLDVYGNPKVFGKNIGGDILCNKKTFMLINALTLADGHQRKELEKWISSTD 262 >gi|313144226|ref|ZP_07806419.1| polyprenyl synthetase family protein [Helicobacter cinaedi CCUG 18818] gi|313129257|gb|EFR46874.1| polyprenyl synthetase family protein [Helicobacter cinaedi CCUG 18818] Length = 297 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 132/230 (57%), Gaps = 22/230 (9%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDDSALRRGKVAA 97 S GK LR L LA + + E L ACA IE I +A+LLHDDV+D++ RR K + Sbjct: 27 LSQGKMLRSKLLLAISGVSE-----DSLRACALIEMIQSASLLHDDVIDEAQTRRQKPSI 81 Query: 98 RLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 ++GN+ ++++GD L S+AF C+ + +++S L+ GE+ +SL+ Sbjct: 82 NALFGNKNAIMLGDVLYSKAFYELSCLDVRLA-----QSVSSAVVRLSIGEIEDVSLASR 136 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 + ++ Y+ + +KTA L AA E +++ G+ ++ + YG NLGIAFQ++DD+LD Sbjct: 137 FHIDKQAYIKMCGNKTAALIVAAAECGAILKGLNKNI---YRIYGENLGIAFQIIDDILD 193 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTIND 259 + + +GK DF+ GK TLP++L +++ + E+ W + +++ Sbjct: 194 FTQDSKTLGKPSMSDFKEGKVTLPLMLMYEKLDENEREIVQGLWATELSE 243 >gi|307720825|ref|YP_003891965.1| Polyprenyl synthetase [Sulfurimonas autotrophica DSM 16294] gi|306978918|gb|ADN08953.1| Polyprenyl synthetase [Sulfurimonas autotrophica DSM 16294] Length = 295 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 132/217 (60%), Gaps = 10/217 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 + GGKRLR L L A E++ + LLA +E IH A+LLHDDV+DD+ RRG+ Sbjct: 24 FATLQGGKRLRAKLILKIAP--EHK--DAPLLAAIVELIHAASLLHDDVIDDAMTRRGEA 79 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + G++T+V++GD L S+AF ++ + A + ++ L++GE+ + +++N + Sbjct: 80 SVNATDGSKTAVMLGDILYSKAFTELVAFDKKVA-QTIASSVTALSKGEMMDVEMAQNFN 138 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 EE YL ++ KTA L AA + S+L+AG +++ + AL YG NLG++FQ++DD+LD Sbjct: 139 ADEERYLDMLYLKTATLIEAAAKASALLAG-KDADKHAL--YGRNLGLSFQIIDDILDIT 195 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQR--GTKREK 250 + +GK D+ GK TLP I +++ +REK Sbjct: 196 ADEATLGKPAMNDYVEGKCTLPYIYLYEKLDDIEREK 232 >gi|305679797|ref|ZP_07402607.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266] gi|305660417|gb|EFM49914.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266] Length = 343 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/334 (29%), Positives = 163/334 (48%), Gaps = 32/334 (9%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDV----VKYLIFSGGKRLRPMLTL-ATALMLE 58 L + L+ ME V R+ ++E PD V +L +GGKR RPM TL A+ Sbjct: 27 LNEHVLRGMENVE----DRLRVELEKSPDFLQEKVMHLTKAGGKRFRPMFTLLASNYGPR 82 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 ++ A +E H ATL HDDV+D++ +RRG +A + W N ++L GD LL+ A Sbjct: 83 PMCEDVFKAAVVVEMTHLATLYHDDVMDEAQMRRGVPSANMRWSNSVAILSGDILLAHAS 142 Query: 119 CMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 ++ S+ ++ ++ A T L G++R+ D E Y+ VI KT VL +A Sbjct: 143 RIM----SELGVDTVAHFAETFGALVTGQMRETEGPGTGDPIEH-YMKVINEKTGVLIAA 197 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A + +L +G L++ G +G+ FQ+VDD++D + GK G D R G T Sbjct: 198 AGYLGALHSGADMETAVCLQAVGTAVGMVFQIVDDIIDIFSTPEDSGKTPGTDLREGVFT 257 Query: 236 LPVILAFQR----GTKREKNFWKSTINDGKISVENLKKAFIIMREN---RALVDTEYRAY 288 LPV+ A Q G + + ++D + + ++ R N +AL D + Sbjct: 258 LPVLYALQEDTPVGAELRELLTGPLVDDASVD----RALQLLARSNGRQKALADV----H 309 Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 Y +A++ L LPD+ ++L ++ + R+ Sbjct: 310 QYLAEAEEKLDQLPDNPTTRALRQLARVTVARVG 343 >gi|108804794|ref|YP_644731.1| trans-hexaprenyltranstransferase [Rubrobacter xylanophilus DSM 9941] gi|108766037|gb|ABG04919.1| Trans-hexaprenyltranstransferase [Rubrobacter xylanophilus DSM 9941] Length = 304 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/178 (40%), Positives = 95/178 (53%), Gaps = 1/178 (0%) Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A A E +HTATL+HDD+VD + RRG +G + +V GD+L ++AF + Sbjct: 54 AAATEVLHTATLIHDDIVDKAKSRRGAPTTVARYGREVAVATGDYLFAEAFAALSSIGDP 113 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + + + LA GEL Q S V EDYL IK KTA LF AA + G+ Sbjct: 114 RVIREFAEASRGLAAGELEQFRASGG-PVDVEDYLEHIKLKTAGLFRAACVAGGTLGGLS 172 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL +YG LG+AFQ+ DDV+D G+ MGK IG D G TLP+I A + G Sbjct: 173 LPQIDALATYGQALGLAFQMSDDVMDLVGKPGIMGKGIGTDLAEGTVTLPIIFALREG 230 >gi|312132100|ref|YP_003999440.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132] gi|311908646|gb|ADQ19087.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132] Length = 319 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 129/235 (54%), Gaps = 4/235 (1%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + + Y++ GGKR+RP+LTL +A + + + A ++E H TL+HDD++D + LR Sbjct: 28 EPIHYILSLGGKRIRPLLTLLSANLFTKSWETAIEPAMSVEVFHNFTLMHDDIMDQAPLR 87 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQL 148 RGK W ++L GD +L +A+ ++ + ++ ++A+ + VA + EG+ + Sbjct: 88 RGKPTVHHKWDTNRAILSGDVMLVEAYELLSKLEASLLKKAILRFNKVAAEVCEGQQLDM 147 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 ++ +V++E+YL +I+ KT+VL ++E+ ++AG + L G NLG+ FQ+ Sbjct: 148 LFAEREEVSKEEYLEMIRLKTSVLVGYSMELGGIVAGASPDACELLYEVGENLGLGFQMT 207 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-GTKREKNFWKSTINDGKI 262 DD+LD + GK +G D K T ++ A ++ G R + D KI Sbjct: 208 DDILDVYADPKLFGKQVGGDILENKKTWLLLRAMEKSGEDRVRTLLSIEDPDQKI 262 >gi|47097124|ref|ZP_00234692.1| polyprenyl synthetase [Listeria monocytogenes str. 1/2a F6854] gi|254830926|ref|ZP_05235581.1| hypothetical protein Lmon1_06179 [Listeria monocytogenes 10403S] gi|254899908|ref|ZP_05259832.1| hypothetical protein LmonJ_08841 [Listeria monocytogenes J0161] gi|254912886|ref|ZP_05262898.1| polyprenyl synthetase [Listeria monocytogenes J2818] gi|254937267|ref|ZP_05268964.1| polyprenyl synthetase [Listeria monocytogenes F6900] gi|47014491|gb|EAL05456.1| polyprenyl synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258609873|gb|EEW22481.1| polyprenyl synthetase [Listeria monocytogenes F6900] gi|293590886|gb|EFF99220.1| polyprenyl synthetase [Listeria monocytogenes J2818] Length = 326 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/240 (37%), Positives = 126/240 (52%), Gaps = 10/240 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLA 68 KD+++V I K I + + VK LI +GGK LRP L +A +Y D V +A Sbjct: 15 KDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVSIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H ATL+HDDVVDDS LRRG +G +V GD+L C I + Sbjct: 75 AALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHAS 132 Query: 129 ALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++E + + + + GEL Q+ S ++VT +YL I KTA LF AL S G Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLF--ALSCYSGATG 190 Query: 186 VQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + K Y G LG+AFQ++DDVLDY +GK + D + G +LP+I A + Sbjct: 191 SKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 250 >gi|90577181|ref|NP_062374.2| decaprenyl-diphosphate synthase subunit 1 [Mus musculus] gi|85700953|sp|Q33DR2|DPS1_MOUSE RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName: Full=All-trans-decaprenyl-diphosphate synthase subunit 1; AltName: Full=Decaprenyl pyrophosphate synthase subunit 1; AltName: Full=Solanesyl-diphosphate synthase subunit 1; AltName: Full=Trans-prenyltransferase 1; Short=TPT 1 gi|81157937|dbj|BAE48219.1| subunit 1 of solanesyl diphosphate synthase [Mus musculus] gi|220941795|emb|CAX15884.1| prenyl (solanesyl) diphosphate synthase subunit 1 [Mus musculus] Length = 409 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 92/321 (28%), Positives = 152/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + D+ +Y GK RP++ + A +N Sbjct: 92 LGWRDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNARE 151 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTATL+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 152 MQASQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASV 211 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 212 ALARIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 271 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 272 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVL 331 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G + + + +++ ++ + T Y A Y KA +R Sbjct: 332 FACQQFPEMNAMIMRRFSLPGDV---DRARQYVL--QSDGVQQTTYLAQQYCHKAVREIR 386 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S+ + +L+++ + L R Sbjct: 387 KLRPSTERDALIQLSESVLTR 407 >gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum Ice1] gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum Ice1] Length = 296 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 90/294 (30%), Positives = 157/294 (53%), Gaps = 30/294 (10%) Query: 11 DMEKVNFLI---LKRICSDVEMIPDVV----KYLIFSGGKRLRPMLTLATALMLEYRGDN 63 +++++N I L R ++ P V+ +Y +F+GGKRLRP+L LA + ++ Sbjct: 6 ELKQLNMKIDAALSRYMPAEDVAPPVIHKAMRYSLFAGGKRLRPVLVLAGCRAVGGDEES 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + ACA+E IHT +L+HDD+ LRRG +V+G T++L GD LL++AF ++ Sbjct: 66 VMAAACALEMIHTYSLIHDDLPAMDDDDLRRGMPTNHVVFGEATAILAGDGLLTRAFGVL 125 Query: 122 IETKSQEALEALSLVACTLAE------------GELRQL-SLSKNLDVTEEDYLHVIKSK 168 E + + +LV +AE G++ + S +K +DV Y+H K Sbjct: 126 AE-EGLRCGRSPALVLQVIAELADAAGSMGMIGGQVMDMESENKQIDVATMAYIHA--HK 182 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 T L A+L + +L+ G +AL YG +LG+AFQ+ DD+LD +G+ ++GK +G D Sbjct: 183 TGALIRASLRIGALLGGGSVEQVEALSRYGDHLGLAFQITDDLLDIQGDPEKIGKPVGSD 242 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTIN-----DGKISVENLKKAFIIMREN 277 +N K T P +L ++ + + ++ ++ D K + ++++REN Sbjct: 243 VKNNKATYPALLGLEKARQEAERVVQAALDSLAGFDEKAELLRELAQYLLVREN 296 >gi|148676195|gb|EDL08142.1| prenyl (solanesyl) diphosphate synthase, subunit 1 [Mus musculus] Length = 407 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 92/321 (28%), Positives = 152/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + D+ +Y GK RP++ + A +N Sbjct: 90 LGWRDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNARE 149 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTATL+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 150 MQASQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASV 209 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 210 ALARIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 269 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 270 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVL 329 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G + + + +++ ++ + T Y A Y KA +R Sbjct: 330 FACQQFPEMNAMIMRRFSLPGDV---DRARQYVL--QSDGVQQTTYLAQQYCHKAVREIR 384 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S+ + +L+++ + L R Sbjct: 385 KLRPSTERDALIQLSESVLTR 405 >gi|281421201|ref|ZP_06252200.1| polyprenyl synthetase [Prevotella copri DSM 18205] gi|281404736|gb|EFB35416.1| polyprenyl synthetase [Prevotella copri DSM 18205] Length = 324 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 3/220 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP L L + + + ++ A A+E H TLLHDD++D++ LRRG Sbjct: 31 IRYVLSMGGKRIRPTLMLLGYNLFKDNPEKILMNAVALETYHNYTLLHDDLMDNADLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSL 150 W T++L GD +L A+ + + + + L L T + EG+ + Sbjct: 91 HETVHKKWDANTAILSGDSMLVLAYERMAQCDEKHLAKVLKLFTTTALEIGEGQQFDMEF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DV EE+Y+ +I+ KT+VL + AL++ +++A + + L +G +G+AFQL DD Sbjct: 151 ENRNDVKEEEYIEMIRLKTSVLLACALKMGAILADASDEDAENLYKFGEQIGLAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LD G+ GK IG D + K T +I AF ++ Sbjct: 211 YLDVYGDTKVFGKEIGGDITSNKKTYMLINAFNHANDAQR 250 >gi|288574875|ref|ZP_06393232.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570616|gb|EFC92173.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 300 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/269 (32%), Positives = 146/269 (54%), Gaps = 19/269 (7%) Query: 23 ICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 + S E +P D + Y + GGKRLRP+L +A A +L R D + +A A+E +HTA+ Sbjct: 26 VGSRPEGVPPRMWDAMVYSLKVGGKRLRPVLCMAAAELLGGRSDLVLPMALALEMVHTAS 85 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALE 131 L+HDD+ +DD LRRG+ +V+G ++L GD LL QAF + + E ++ Sbjct: 86 LIHDDLPAMDDDVLRRGQPTNHVVYGEALAILAGDALLCQAFELPLTELPSEIPRGNVVK 145 Query: 132 ALSLVACTLAEGEL---RQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQ 187 A++ A ++ G + + L + E I + KTA L +L ++++G Sbjct: 146 AVAHFARSIGPGGICGGQVLDMESEGSEEECSSPTEISTLKTAALIRTSLITGAILSGGS 205 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +AL+SYG+ LG+AFQ+ DD+LD +G+ E+GK++G+D +GK T L + + Sbjct: 206 AEDLEALESYGLELGVAFQIADDILDVKGDQEELGKSLGKDEAHGKRTFVSDLGMEGAMR 265 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRE 276 R K + I+ S++ ++ +RE Sbjct: 266 RLKERTERAIS----SLDRFGESSAFLRE 290 >gi|224437780|ref|ZP_03658727.1| hypothetical protein HcinC1_07400 [Helicobacter cinaedi CCUG 18818] Length = 303 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 132/230 (57%), Gaps = 22/230 (9%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDDSALRRGKVAA 97 S GK LR L LA + + E L ACA IE I +A+LLHDDV+D++ RR K + Sbjct: 33 LSQGKMLRSKLLLAISGVSE-----DSLRACALIEMIQSASLLHDDVIDEAQTRRQKPSI 87 Query: 98 RLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 ++GN+ ++++GD L S+AF C+ + +++S L+ GE+ +SL+ Sbjct: 88 NALFGNKNAIMLGDVLYSKAFYELSCLDVRLA-----QSVSSAVVRLSIGEIEDVSLASR 142 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 + ++ Y+ + +KTA L AA E +++ G+ ++ + YG NLGIAFQ++DD+LD Sbjct: 143 FHIDKQAYIKMCGNKTAALIVAAAECGAILKGLNKNI---YRIYGENLGIAFQIIDDILD 199 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTIND 259 + + +GK DF+ GK TLP++L +++ + E+ W + +++ Sbjct: 200 FTQDSKTLGKPSMSDFKEGKVTLPLMLMYEKLDENEREIVQGLWATELSE 249 >gi|268565995|ref|XP_002639605.1| C. briggsae CBR-COQ-1 protein [Caenorhabditis briggsae] gi|187029454|emb|CAP31310.1| CBR-COQ-1 protein [Caenorhabditis briggsae AF16] Length = 392 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/301 (28%), Positives = 144/301 (47%), Gaps = 35/301 (11%) Query: 33 VVKYLIFSGGKRLRPMLTL-----------------ATALMLEYRG---------DNHVL 66 + Y GGK LRP ++L A+ + R N Sbjct: 77 MTHYYFQQGGKMLRPTVSLLMGNACNSAMNRSIPEEQIAIPISERSAISSHLIVCQNQYK 136 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 + E IHTA+L+HDDV+D++ RRG + VWGN+ SVLVGDF+L++A ++ Sbjct: 137 IGMIAEMIHTASLVHDDVIDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCSIGK 196 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEE---DYLHVIKSKTAVLFSAALEVSSLI 183 + ++ + L GE Q+S++ + + Y+ KTA LF+++ ++++ Sbjct: 197 PNVIAVMASIIEDLVLGEFMQMSVTPSEATPSQRMVAYIEKTHRKTASLFASSCRSTAIL 256 Query: 184 AGVQNS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 A NS + Q YG NLGIAFQL DD+LD+ +EMGK + D + G T PV+ A Sbjct: 257 ADSSNSNLHQTAYEYGRNLGIAFQLADDLLDFIATSDEMGKPVAADLKLGLATAPVLYAC 316 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 ++ + + ++G + ++A I+ + + T +Y QKA + LP Sbjct: 317 EQYPELTTMLLRKFKHEG-----DAERARDIVMNSDGMDKTRQLIDAYSQKAVEMASSLP 371 Query: 303 D 303 + Sbjct: 372 N 372 >gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 300 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 127/237 (53%), Gaps = 14/237 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + +GGKRLRP+L LA + +N + A AIE IHT +L+HDD+ +D+ Sbjct: 40 EAMRYSLLAGGKRLRPILCLAACELTGSDSENAISTAVAIEMIHTMSLIHDDLPSMDNDD 99 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSLVACT--L 140 LRRG+ V+G ++L GD LL++AF MV + + + + LSLVA L Sbjct: 100 LRRGRPTNHKVYGEAIAILAGDALLTRAFEMVALRSPNVPKDRLLKVVGELSLVAGAPGL 159 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G++ L S K +D+ +++H+ KT L A++ +LI G + AL +Y Sbjct: 160 VGGQVEDLESEGKAVDLDTLEFIHI--HKTGALLKASVVCGALIGGADEDLLIALSTYAK 217 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 +G+AFQ+VDD+LD +GK G+D K T P +L K+ K + + Sbjct: 218 GIGLAFQIVDDILDVTASSEVLGKTAGKDLLADKSTYPKLLGLDESRKKAKELIRKS 274 >gi|15614216|ref|NP_242519.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Bacillus halodurans C-125] gi|10174270|dbj|BAB05372.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Bacillus halodurans C-125] Length = 323 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 92/317 (29%), Positives = 154/317 (48%), Gaps = 23/317 (7%) Query: 17 FLILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACA 70 F I + + V+ D+++ +L+ +GGKR+RP+ L Y D +VL +A Sbjct: 15 FTIERELEEAVQARHDILRKASVHLLKAGGKRIRPVFVLLAGKFGTY--DVNVLKHIAVP 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++ ++A Sbjct: 73 LELIHMASLVHDDVIDDADLRRGKKTIKSQWDNRIAMYTGDYMFAKAVQTATYFDDPNIH 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + +S + GE+ Q+ N + Y IK KTA+L + + ++ +L A ++ Sbjct: 133 QIISNAINEMCLGEVEQIRDQYNPNQHLRIYFRRIKRKTALLIAVSCQLGALAAKADPAI 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 Q L +G +G++FQ+ DDVLD+ G ++GK G D G TLP + A ++ Sbjct: 193 VQKLYYFGYYVGMSFQITDDVLDFVGTEEQLGKPAGSDLLQGNVTLPALYALHHDMHAKR 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMREN-RALVDTEYRAYS------YGQKAKDSLRCLPD 303 + + G SV M E A+V + Y+ Y +KA L LPD Sbjct: 253 LIEQVLADRGNNSVH--------MEEVIAAIVSSGGIDYALSISDLYLKKAMRMLDHLPD 304 Query: 304 SSWKKSLMEVVDFCLQR 320 K+ L E+ ++ +R Sbjct: 305 DEPKQFLQEIANYIGRR 321 >gi|294496201|ref|YP_003542694.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Methanohalophilus mahii DSM 5219] gi|292667200|gb|ADE37049.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Methanohalophilus mahii DSM 5219] Length = 321 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 95/293 (32%), Positives = 160/293 (54%), Gaps = 11/293 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +YL +GGKRLRP + + +A + D+ + A A+E IH TL+HDD++D +RR Sbjct: 33 ATRYLPDAGGKRLRPAVLMLSAEAVGGDSDSVLPAAVALELIHNFTLIHDDIMDRDDIRR 92 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLVA--CT-LAEGELRQ 147 G A + WG ++L GD L S+AF ++ ++ Q+ L+ ++L++ CT + EG+ Sbjct: 93 GMPALHVKWGTAGAILAGDTLYSRAFEIISKMDADPQKLLKCVALLSRTCTKICEGQWLD 152 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + K V ++YL +I++KT+VL+ AA +V +++ G + V A+ +G GI+FQ+ Sbjct: 153 VDFEKRDIVDVDEYLEMIENKTSVLYGAAAKVGAILGGASDEVADAMYEFGRLTGISFQI 212 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DDV+D +GK+ G D + GK TL + A G + E F K+ +I+ Sbjct: 213 HDDVIDLVTPEEILGKSRGSDLKEGKKTLIALHALNNGVELE-CFGKADATQDEIN---- 267 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A + E+ L A +Y + K L L DS K++L+E+ D+ + R Sbjct: 268 -NAVAKLEESGTLAYVREMADNYLEDGKSKLDLLEDSPAKETLIEIADYMVSR 319 >gi|296130537|ref|YP_003637787.1| Trans-hexaprenyltranstransferase [Cellulomonas flavigena DSM 20109] gi|296022352|gb|ADG75588.1| Trans-hexaprenyltranstransferase [Cellulomonas flavigena DSM 20109] Length = 335 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 153/298 (51%), Gaps = 15/298 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D ++L+ +GGKRLRP+LTL TA + + + A +E H ATL HDDV+D + LR Sbjct: 42 DASRHLVDAGGKRLRPLLTLLTAELGDGNRREVIDAAAVVELTHLATLYHDDVMDSAPLR 101 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQL 148 RG +A VWGN ++L GD L ++A +V S EA+ + A T L G+L + Sbjct: 102 RGAPSAHEVWGNSVAILTGDLLFARASSIV----SGLGPEAVRIQAQTFERLCLGQLHET 157 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + + E YL V+ KTA L + + ++ AG + V + + +G +G+AFQL Sbjct: 158 VGPRPDEDPVEHYLQVLADKTASLIATSARFGAMFAGCRPDVVRTVTQFGEIVGVAFQLA 217 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK-----REKNFWKSTINDGKIS 263 DDV+D + + GK G D R G PT+P +L R + R+++ + D ++ Sbjct: 218 DDVIDLTSDGSVTGKTPGTDLREGVPTMPALLLRSRAAQTPAGSRDRDVV--ALLDSDLT 275 Query: 264 VE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +L A +RE+ + T RA ++A L LP K +L+ D + R Sbjct: 276 ADADLAVAVEALREHEVVTLTRRRAVELARQAVTELGPLPAGPVKDALVAFADALVDR 333 >gi|227497907|ref|ZP_03928087.1| possible trans-hexaprenyltranstransferase [Actinomyces urogenitalis DSM 15434] gi|226832673|gb|EEH65056.1| possible trans-hexaprenyltranstransferase [Actinomyces urogenitalis DSM 15434] Length = 368 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 147/292 (50%), Gaps = 11/292 (3%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR---GDNHVLLA 68 +E V +L+ + + E I +L +GGKRLRP+LTL TA + + + G+ Sbjct: 20 LEAVETRLLQVVNNADETINPPTSHLAEAGGKRLRPVLTLLTAQLGDPQTATGEKVRDAG 79 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E H ATL HDDV+DD+ LRRG +A+ VWGN ++L GD L+++A ++ E Sbjct: 80 VAVELTHIATLYHDDVMDDAPLRRGAPSAQTVWGNSAAILTGDVLVARA-SQLVAALGPE 138 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A+ A + L G+L + +L + + Y+ V+ KT L + + +++ Sbjct: 139 AVLAHAKTFERLCMGQLHE-TLPRPVGTDPVAHYIQVLADKTGSLIAVSARYGAMLTEAG 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + ++ +G +G+AFQL DDV+D + GK G D R G T+PV+L Q Sbjct: 198 EETERIVEEFGEKIGVAFQLADDVIDLTSDSETTGKTPGTDLREGVETMPVLLLRQALAA 257 Query: 248 REKNFWK----STINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKA 294 E + ST++ G + + L +RE+ L T A ++ +A Sbjct: 258 GELDAAGQSILSTLSSGDLQDDAVLGDVVARLREHPVLARTREMAMAWADQA 309 >gi|193213417|ref|YP_001999370.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] gi|193086894|gb|ACF12170.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] Length = 332 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 3/290 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +Y++ GKR+RP LTL + + +N + +A IE +H TL+HDD++D + LR G Sbjct: 41 ARYILEGKGKRIRPFLTLLASEAVSGSSENALGVALGIEVLHNFTLMHDDIMDAADLRHG 100 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV---IETKSQEALEALSLVACTLAEGELRQLSL 150 + W ++L GD +++ A+ + I ++ E + + T+ EG+ + L Sbjct: 101 RPTVHKQWDVNAAILSGDMMIAYAYELALKAISSRHAEMIHIFNDANITICEGQALDMEL 160 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + DVT DYL +I KT L SAALE + AL ++G +G AFQ+ DD Sbjct: 161 EQRKDVTIADYLDMISKKTGRLISAALEAGGVAGNGTPEQIAALVTFGEKIGRAFQIQDD 220 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 LD + GK G D NGK T ++ + + ++ +S ++ S EN+ Sbjct: 221 YLDIMAGDGKSGKVPGGDVINGKKTWLLLRSLELAEGADRELLQSIFDNNGTSPENVPAV 280 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I + L +T + + A D+L LP + L + ++R Sbjct: 281 KAIFEQCGVLEETRAKINEDTEAALDALESLPFEEGRGYLRGFANILMKR 330 >gi|271962169|ref|YP_003336365.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM 43021] gi|270505344|gb|ACZ83622.1| Trans-hexaprenyltranstransferase [Streptosporangium roseum DSM 43021] Length = 331 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/319 (26%), Positives = 151/319 (47%), Gaps = 4/319 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 ++ +DL + +V L+ + S+ + + K+LI +GGKR R ML L A Sbjct: 15 RLAQDLA-SGLAEVEKLLRSSVESEDAFVTEASKHLIEAGGKRFRAMLVLLAAQFGSPEA 73 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 V A IE H ATL HDDV+D++ +RRG +A W N ++L GD+L +QA + Sbjct: 74 PGVVPGAVVIELTHLATLYHDDVMDEAPVRRGSPSANARWDNTVAILTGDYLFAQA-SEI 132 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + + + + L G++R+ + + Y+ V+ KT L + + + Sbjct: 133 LADLGADVIRIQAQTFSRLVRGQIRETIGPRPGEDHVAHYIDVLADKTGSLIATSGRFGA 192 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L++G + L +G+ +QL DD+LD + E GK G D R G TLPV+ Sbjct: 193 LLSGASPEIVDRLTRACEAIGVGWQLGDDLLDVASDSVESGKTPGTDLREGIRTLPVLYV 252 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + + + G ++ +++ + ++R N A+V ++ +A+ L L Sbjct: 253 LSSDAPEDARLRE--LLAGPVAEDDVAETLRLLRANPAMVRARAELVAWVDRARADLSGL 310 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PD + + + + D+ ++R Sbjct: 311 PDIPARAAYLALCDYVVER 329 >gi|302325898|gb|ADL25099.1| polyprenyl synthetase family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 317 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/243 (34%), Positives = 129/243 (53%), Gaps = 6/243 (2%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLLACA-IEFIHTATLLHDDVVDD 87 I D + L GKR+R L A + D + V ACA +E +H A+L+HDD++D Sbjct: 24 ISDRLVTLFSRKGKRIRSTLLCLLANCGAQKPDIDRVAHACAAVELLHLASLVHDDIIDG 83 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 + +RRG+ A WG Q +VL+GD++LSQ+ VI+ +++ +S A L GE+ + Sbjct: 84 TDVRRGQKTAHREWGTQVAVLIGDYVLSQSMRCVIDEQARNIPVIISDAADKLIIGEIME 143 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 L ++ ++ + Y +I KTA L AA + ++AG + G + GIAFQ+ Sbjct: 144 LDHCGDMSLSRKSYNEIIDGKTAALIDAAARIGGILAGFDQPMVDECAKMGTHFGIAFQI 203 Query: 208 VDDVLDY-RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 +DD+LDY G VN M K D NG TLP++ F+ T E+ + I K S E Sbjct: 204 IDDLLDYGYGSVN-MDKAKFTDLSNGLITLPLLYYFEDCTAEERREMEGFI--AKASAEG 260 Query: 267 LKK 269 + + Sbjct: 261 IPE 263 >gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424] gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424] Length = 307 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/221 (34%), Positives = 120/221 (54%), Gaps = 11/221 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L LAT ++ + + ACA+E IHT +L+HDD+ + Sbjct: 42 EKIYEAMRYSLLAGGKRLRPILCLATCDLMGGTVEMAMPTACALEMIHTMSLIHDDLPAM 101 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVA------- 137 D+ RRGK+ V+G ++L GD LLS AF V +T++ + L ++A Sbjct: 102 DNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFEYVATQTRNVPPEQILEVIARLGRTVG 161 Query: 138 -CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ L D+T E + KT L ++ +++AG + L Sbjct: 162 AAGLVGGQVLDLESEGKSDITPETLTFIHTHKTGALLETSVVSGAILAGATREEVEKLSR 221 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 Y N+G+AFQ+VDD+LD E+GK+IG+D + K T P Sbjct: 222 YAQNIGLAFQIVDDILDITATQEELGKSIGKDVQAQKATYP 262 >gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106] gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106] Length = 287 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 120/232 (51%), Gaps = 11/232 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L LAT + + + AC++E IHT +L+HDD+ + Sbjct: 22 EKIYEAMRYSLLAGGKRLRPILCLATCELAGGTMEMAMPTACSLEMIHTMSLIHDDLPAM 81 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEAL-----SLV 136 D+ RRG++ V+G ++L GD LLS AF V Q+ L+ + ++ Sbjct: 82 DNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVATQTTNVPPQQVLDVIGHLGRAVG 141 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 A L G++ + D+TEE + KT L A + +++AG R+ L Sbjct: 142 AAGLVGGQVVDVESEGKTDITEEQLTFIHTHKTGALLEACVVSGAILAGTSTENRERLSR 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 Y +G+AFQ+VDD+LD E+GK G+D K T P + + +R Sbjct: 202 YAQKIGLAFQIVDDILDITATQEELGKTAGKDLTAQKATYPSLWGLEESKRR 253 >gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2] gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2] Length = 302 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/263 (32%), Positives = 137/263 (52%), Gaps = 20/263 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y +F+GGKRLRP+L +A A + G + +ACA+E IHT +L+HDD+ LR Sbjct: 42 MRYSLFAGGKRLRPILCIAGAEAVGGVGQRVLPVACAVELIHTYSLIHDDLPVMDDDDLR 101 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV----------AC-TL 140 RGK V+G ++L GD LL++AF ++ K+ E +E L+ C + Sbjct: 102 RGKPTNHKVFGEAIALLAGDGLLTEAFSLMTSPKATENIEPPGLLEVIQIIAVAAGCEGM 161 Query: 141 AEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G++ L KN + +LH KT + A++ ++ AG + SV Q SYG Sbjct: 162 VGGQVVDILWEGKNAEFETVKFLHT--HKTGAMIRASVMSGAIAAGARESVVQHFSSYGH 219 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 +G+AFQ+ DD+LD G+ MGK G D GK T P +L K ++ + + D Sbjct: 220 KIGLAFQISDDILDVEGDSEIMGKMAGADEGKGKTTYPSVLGMDESKKIQEALVRDAVQD 279 Query: 260 GKI---SVENLKK-AFIIMRENR 278 ++ + E L+K A+ I+ + Sbjct: 280 LEVFGDAAEPLRKIAYYIIERKK 302 >gi|150026434|ref|YP_001297260.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86] gi|149772975|emb|CAL44459.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86] Length = 324 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/285 (30%), Positives = 141/285 (49%), Gaps = 10/285 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y++ GGKR+RP+LTL + + + A AIE H +L+HDD++DD+ LRRG Sbjct: 31 IDYILSLGGKRMRPILTLMATEVFDVDCKKSLAAATAIEIFHNFSLVHDDIMDDAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQLSL 150 W T +L GD +L A+ E + + + + S A + EG+ + Sbjct: 91 NETVHEKWNINTGILSGDAMLILAYQHFEEYEPKIFRDLAKLFSKTALEVCEGQQYDVDF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 DV +YL +I+ KTAVL AA+++ +++A + +G+NLGIAFQL DD Sbjct: 151 ETRDDVIIAEYLKMIEYKTAVLVGAAMKMGAIVAQTSTENANLIYDFGLNLGIAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK----NFWKSTINDGKISVEN 266 LD G GK +G D K T + A + +EK + + ND + + Sbjct: 211 YLDAFGNPETFGKQVGGDIIENKKTYLYLKAIEFSQPQEKEQLLHLFSIQPNDSSDKIIS 270 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 +K+ F + +A T+ Y KA ++L + S+ KK+++ Sbjct: 271 VKEIF---NKTKASEATQKAIQDYTFKAFETLEKMNISNNKKTIL 312 >gi|295136374|ref|YP_003587050.1| isoprenyl synthetase [Zunongwangia profunda SM-A87] gi|294984389|gb|ADF54854.1| isoprenyl synthetase [Zunongwangia profunda SM-A87] Length = 324 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 110/204 (53%), Gaps = 3/204 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GGKRLRP+L L + + + + AIE H +L+HDD++DD+ LRRGK Sbjct: 33 YILGLGGKRLRPVLVLMATEIFDKDYKKALDASLAIEIFHNFSLVHDDIMDDAPLRRGKA 92 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACTLAEGELRQLSLSK 152 W T +L GD +L A+ + + +E + + A + EG+ + Sbjct: 93 TVHEKWDVNTGILSGDAMLINAYQLFENYEGDTFKELAQLFTKTAIEVCEGQQYDIDFET 152 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 DV+ +DYL +I+ KTAVL A+L++ +++A V ++A+ +G LGIAFQL DD L Sbjct: 153 RDDVSIDDYLKMIEYKTAVLVGASLQMGAIVAEVDEECKKAIYQFGRLLGIAFQLQDDFL 212 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTL 236 D G+ GK +G D K T Sbjct: 213 DAFGDPKTFGKQVGGDIIENKKTF 236 >gi|145245453|ref|XP_001394994.1| hexaprenyl pyrophosphate synthase [Aspergillus niger CBS 513.88] gi|134079694|emb|CAK97120.1| unnamed protein product [Aspergillus niger] Length = 450 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 17/275 (6%) Query: 58 EYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112 ++ GD +L LA E IHTA+LLHDDV+D++ RR +A L +GN+ +VL GDF Sbjct: 179 DFAGDKDILPTQRRLAEITELIHTASLLHDDVIDNAVSRRSLTSANLQFGNKMAVLAGDF 238 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEED---YLHVI 165 +L +A + + E +E +S V L EGE QL + KN T++ YL Sbjct: 239 MLGRASVALARLRDPEVIELMSTVITNLVEGEFMQLKNTAADEKNPVFTDDTLSYYLQKT 298 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KT L S + ++++ V +A YG NLG+AFQLVDD+LDY E+GK Sbjct: 299 YLKTGSLISKSCRSTAVLGHSAPEVVEASYQYGRNLGLAFQLVDDMLDYTLTEAELGKPA 358 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 G D G T P++ A+++ + + G +++KA ++ + + T Sbjct: 359 GADLELGLATAPLLFAWKQFPELGPLVGRKFSQPG-----DVQKARELVIKADGVEQTRI 413 Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A Y KA ++ PDS K L ++ + ++R Sbjct: 414 LAQEYADKAVAAISDFPDSDAKAGLAQMCEKTMKR 448 >gi|317486885|ref|ZP_07945696.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6] gi|316921875|gb|EFV43150.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6] Length = 325 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 90/301 (29%), Positives = 146/301 (48%), Gaps = 12/301 (3%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 V ++P + +Y + +GGKRLRP+LT+ A +L Y ++ LA A+E H ATLLHDDV+D Sbjct: 28 VSIMP-IAQYAMGNGGKRLRPLLTVLVARLLGYADNDIYPLAAAMEMFHVATLLHDDVMD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 ++ +RRG A V+G ++L GD LL++ +V A S A GE+ Sbjct: 87 NAEMRRGSTATHKVFGVTETILAGDALLAKGNQIVAGFGDPRLTAATSDAIAQTANGEIL 146 Query: 147 QLSLSKNLDVTEED---YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 +++ N D Y +I KTA + + + ++ A YG NLG+ Sbjct: 147 EIA---NQGKNAPDLLIYNQIIAGKTAWMIRTSCNIGAVRANGTPEQVAGATDYGFNLGM 203 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQ+VDD LD+ + GK G D R GK T P+ E++ + + + + Sbjct: 204 AFQIVDDALDF-APSSLTGKPEGGDVREGKLTPPIFFYANSLAPAERDAFFARFAEQSFT 262 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC----LPDSSWKKSLMEVVDFCLQ 319 E+++ +R T A +Y +KA+++L LP S + + L + + Sbjct: 263 DEDVRHVIDTVRAQGFDDKTRGIADTYLRKAQENLDALTAGLPASPYGEILTSFIGYVRN 322 Query: 320 R 320 R Sbjct: 323 R 323 >gi|119719519|ref|YP_920014.1| geranyltranstransferase [Thermofilum pendens Hrk 5] gi|119524639|gb|ABL78011.1| Geranyltranstransferase [Thermofilum pendens Hrk 5] Length = 337 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 148/304 (48%), Gaps = 17/304 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D V Y + GGKR+RP LT+A+ L + + +N + A A+E H +L+ DD++D S LR Sbjct: 34 DAVLYQVRMGGKRVRPALTIASTLAVGGKEENALPAAAAVELAHNYSLILDDIIDHSELR 93 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLAEGE-----L 145 RGK +G T++L+ + +T A ++ L +GE Sbjct: 94 RGKPTVWKKYGISTAILIAVHYRESITEALNDTPEPPVFHAIMAETIKLLTDGERLDILF 153 Query: 146 RQLSLSKNLDVTEE--------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 Q S V E+ DYL +I+ KTA L + +L AG + + +AL+ Y Sbjct: 154 EQSGRSDEPYVVEQRYRAVRLDDYLRMIERKTAKLIETSCVFGALSAGQRGEILEALREY 213 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK-PTLPVILAFQRGTKREKNFWKST 256 G NLG+AFQ+ DD++D GE + GK +G D + K + V+LA + R+K + Sbjct: 214 GYNLGMAFQVGDDIIDIFGEEEKTGKRVGGDIKEHKLGNVVVLLALE--ETRDKERLLAI 271 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 + +S E +K+A I+ E A E Y +A +L LP S ++ L E+ F Sbjct: 272 LRKEDVSWEEVKEAISIISETNAREKAEVLRRDYVSRALKALEKLPRSEYRDMLEELAVF 331 Query: 317 CLQR 320 +R Sbjct: 332 IEKR 335 >gi|17505681|ref|NP_491588.1| COenzyme Q (ubiquinone) biosynthesis family member (coq-1) [Caenorhabditis elegans] gi|15617696|gb|AAB37678.2| Coenzyme q (ubiquinone) biosynthesis protein 1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 393 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 92/302 (30%), Positives = 142/302 (47%), Gaps = 37/302 (12%) Query: 33 VVKYLIFSGGKRLRPMLTLATA------------------LMLEYRG--------DNHVL 66 + Y GGK LRP ++L L E G N Sbjct: 78 MTHYYFQQGGKMLRPTVSLLMGNACNSAANRSISEEYLAMLSTERSGIAAHLSVCQNQYK 137 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 + E IHTA+L+HDDV+D++ RRG + VWGN+ SVLVGDF+L++A ++ Sbjct: 138 IGMIAEMIHTASLVHDDVIDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCSIGK 197 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEED----YLHVIKSKTAVLFSAALEVSSL 182 + ++ + L GE Q+S + D T D Y+ KTA LF+++ +++ Sbjct: 198 PNIISVMASIIEDLVLGEFMQMSTTPT-DATPVDRMKAYIEKTHRKTASLFASSCRSAAI 256 Query: 183 IA-GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +A G + + YG NLGIAFQL DD+LD+ +EMGK + D + G T PV+ A Sbjct: 257 LADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLKLGLATAPVLYA 316 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++ + + +DG + +KA I+ + + T SY QKA + L Sbjct: 317 CEQYPELNTMLLRKFKHDG-----DAEKAREIVVNSDGMDKTRRLIDSYSQKAVEMASSL 371 Query: 302 PD 303 P+ Sbjct: 372 PN 373 >gi|296119175|ref|ZP_06837745.1| trans-hexaprenyltranstransferase [Corynebacterium ammoniagenes DSM 20306] gi|295967801|gb|EFG81056.1| trans-hexaprenyltranstransferase [Corynebacterium ammoniagenes DSM 20306] Length = 366 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 163/330 (49%), Gaps = 19/330 (5%) Query: 4 LEDLTLKDMEKVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 L D L D ++R+ D + D ++L +GGKR RP+++L ++ Sbjct: 45 LGDDQLNDRVAAGVAAVERLLHDETNRGASFVSDKAQHLSEAGGKRFRPIMSLLSSEFGS 104 Query: 59 YRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 G V+ A +E +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A Sbjct: 105 EPGSEKVIKAATVVEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGDALLAHA 164 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 ++ + + +E + L G++R+ + + + Y+ VI+ KTAVL ++A Sbjct: 165 SRLMSQLDTH-TVEQFAATFEELVTGQMRETVGAGEANPIDH-YMKVIQEKTAVLIASAG 222 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +G +AL++ G +G+ FQ+VDD++D E +E GK G D R G TLP Sbjct: 223 YFGAYHSGAPKEHAEALRTIGGAIGMVFQIVDDIIDIFSESHESGKTPGTDLREGVFTLP 282 Query: 238 VILAFQRGTKREKNFWKSTINDGKISV-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 V+ A + ++ + + + G + E++++A ++R ++ RA Q+ D Sbjct: 283 VLYALEEDSEAGQGLRE--LLTGPLEADEDVERALELLRASKG----RERALEVVQRYID 336 Query: 297 --SLRC--LPDSSWKKSLMEVVDFCLQRLN 322 S C LPD ++L + + R+ Sbjct: 337 IVSAECATLPDIPATRALRNLASYTADRVG 366 >gi|298346132|ref|YP_003718819.1| putative trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 43063] gi|304390108|ref|ZP_07372062.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657365|ref|ZP_07910247.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236193|gb|ADI67325.1| possible trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 43063] gi|304326590|gb|EFL93834.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491837|gb|EFU81446.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 350 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 89/326 (27%), Positives = 164/326 (50%), Gaps = 19/326 (5%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL- 67 L D+E+ ++++ + E +V +L +GGKR+RP+LTL L+ + N + Sbjct: 32 LDDIEQ---MLVQETQTQREKTSALVSHLRAAGGKRMRPLLTL---LVSQLGAPNQPVSS 85 Query: 68 -----ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 A A+E H A+L HDD++D++ +RRG AA + W N +V+ GD + S+A +++ Sbjct: 86 QVKQGAVAVELTHLASLYHDDLMDEATMRRGVPAAHVQWNNTLAVMAGDLIFSRA-SLLV 144 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + + S L +G++R + + D E Y+ V++ KT L A + Sbjct: 145 SGLNPTIVAQHSRTFERLCQGQMRDIFGPDSHDDPIEFYIDVLRDKTGALIGCAALYGAE 204 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++G + A+ +G +LG+AFQ+ DDVLD + + GK G D R+G T PV+L Sbjct: 205 LSGCDAATVSAVTQFGEDLGVAFQIADDVLDLQATEAQSGKTPGADLRDGTKTFPVLLLE 264 Query: 243 Q-----RGTKREKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 + R T ++ ++ + + + L + + + +T+ A + ++A Sbjct: 265 KTVQDGRDTGPDRALLQAIADTDALQDDAVLAQVTAQLAAHPVTEETKRLAGEWVERALA 324 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 L+ +PDS K++L+E + RL Sbjct: 325 HLQNIPDSEVKRALVEFAHLQINRLQ 350 >gi|255578548|ref|XP_002530137.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis] gi|223530362|gb|EEF32253.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis] Length = 417 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/240 (35%), Positives = 122/240 (50%), Gaps = 19/240 (7%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALMLEYR-------GD--------N 63 + ++V + +Y G GKR RP +L +ATAL + GD Sbjct: 98 VVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVHIPEPTPTGVGDVVATELRAR 157 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A E IH A+LLHDDV+DD+ RRG + V GN+ +VL GDFLLS+A + Sbjct: 158 QQSIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVAVLAGDFLLSRACVALAS 217 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ E + L+ V L GE Q++ + + E Y+ KTA L S + + +L+ Sbjct: 218 LKNTEVVSLLATVVEHLVTGETMQMTSTSEQRCSMEYYMQKTYYKTASLISNSCKAIALL 277 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V YG NLG+AFQL+DDVLD+ G +GK D R+G T P++ A + Sbjct: 278 AGQTAEVAMLAFEYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAME 337 >gi|229553018|ref|ZP_04441743.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus LMS2-1] gi|229313640|gb|EEN79613.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus LMS2-1] Length = 312 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/291 (31%), Positives = 140/291 (48%), Gaps = 6/291 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +++ I +GGK LR L L A E V AIE +H ATL+HDDV+D + +RR Sbjct: 27 LIQQQINAGGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDVLDHADIRR 86 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-LEALSLVACTLAEGELRQLSLS 151 G GN+ ++ GDFL + F ++ E + L + + + GE+ Q S Sbjct: 87 GMTTVSAESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNARIMKRIFMGEVDQNGPS 146 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 L T YL I KTA LF+ A + I + + ++A +G LG+AFQ++DD+ Sbjct: 147 APLIPTVNAYLSAISGKTAALFALATYTGATIGHLSATQKKAAYRFGRQLGMAFQMIDDL 206 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LDY + K ED NG TLP+I A+Q + K+ + N + Sbjct: 207 LDYTQTAKTLNKPALEDLNNGIVTLPLIYAYQTVPDQLTPLTKT----AEQIAANADEIA 262 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 I+R++ L A++Y +A +L LP S K +L ++ LQR + Sbjct: 263 AIVRKH-GLPQAHQLAFTYTHRAIAALNPLPSSPTKAALTKLTQQLLQRTH 312 >gi|191639107|ref|YP_001988273.1| Polyprenyl synthetase family protein [Lactobacillus casei BL23] gi|239630025|ref|ZP_04673056.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067168|ref|YP_003789191.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str. Zhang] gi|190713409|emb|CAQ67415.1| Polyprenyl synthetase family protein [Lactobacillus casei BL23] gi|239527637|gb|EEQ66638.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439575|gb|ADK19341.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str. Zhang] gi|327383175|gb|AEA54651.1| Octaprenyl-diphosphate synthase protein [Lactobacillus casei LC2W] gi|327386359|gb|AEA57833.1| Octaprenyl-diphosphate synthase protein [Lactobacillus casei BD-II] Length = 322 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/289 (31%), Positives = 142/289 (49%), Gaps = 6/289 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +++ I +GGK LR L L A + D+ + AIE +H ATL+HDDV+D + LRR Sbjct: 37 LIQQQINAGGKMLRSGLMLMLARLGNPDNDDLITAGAAIEALHLATLVHDDVLDHADLRR 96 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-LEALSLVACTLAEGELRQLSLS 151 G GN+ ++ GDFL + F ++ E L + V + GE+ Q S Sbjct: 97 GSDTVSAKSGNREAIYAGDFLFAIYFQLLSEQNPATTDLATNARVMKHIFMGEVDQNGPS 156 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 L + +YL I KTA LF+ A + I + + ++A +G LG+AFQ++DD+ Sbjct: 157 APLIPSVSEYLKAIAGKTAALFALATYTGATIGQLDFTEKKAAYRFGRQLGMAFQMIDDL 216 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LDY + K + ED NG TLP+I A+Q ++ + KI+ + + A Sbjct: 217 LDYTQTTATLNKPVLEDLHNGIVTLPLIYAYQNVPEQLAPLVGTA---AKIAANSDRIAA 273 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I+ L A Y KA ++L LPD+ K+ L ++ L+R Sbjct: 274 IV--SEHGLPQARQLATRYTDKAINALAPLPDARIKQELRKLTQQLLRR 320 >gi|319956645|ref|YP_004167908.1| polyprenyl synthetase [Nitratifractor salsuginis DSM 16511] gi|319419049|gb|ADV46159.1| Polyprenyl synthetase [Nitratifractor salsuginis DSM 16511] Length = 298 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/208 (38%), Positives = 121/208 (58%), Gaps = 8/208 (3%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y GKRLR L L A G + V A +E IH A+LLHDDV+DD+ RRG+ Sbjct: 25 YSRLPAGKRLRARLILTIA----GSGLSAVKTAAIVEMIHAASLLHDDVIDDAYTRRGRP 80 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + ++GN+TS++ GD L S+AF +++ Q A +++ L+ GE + + LS++ + Sbjct: 81 SINALYGNKTSIMFGDVLYSKAFYELVDIDRQVA-RSIANAVVLLSLGERQDVLLSESFN 139 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 + YL +I KTA L AA E ++++AG R+A ++YG NLGIAFQ++DD+LD Sbjct: 140 PDRDAYLKMIYQKTAALIEAAAESAAILAGKD---REAYRTYGRNLGIAFQMIDDILDIT 196 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +GK DF GK TLP I ++ Sbjct: 197 QSAEALGKPAMHDFEEGKTTLPYIYLYE 224 >gi|66814354|ref|XP_641356.1| hypothetical protein DDB_G0280293 [Dictyostelium discoideum AX4] gi|74855905|sp|Q54VJ9|DPS1_DICDI RecName: Full=Decaprenyl-diphosphate synthase; AltName: Full=All-trans-decaprenyl-diphosphate synthase subunit 1; AltName: Full=Coenzyme Q biosynthesis protein 1; AltName: Full=Decaprenyl pyrophosphate synthase; AltName: Full=Trans-prenyltransferase; Short=TPT gi|60469379|gb|EAL67373.1| hypothetical protein DDB_G0280293 [Dictyostelium discoideum AX4] Length = 456 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 14/283 (4%) Query: 42 GKRLRP--MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GKR+RP +L L+ AL G + + LA +E IHTA+L+HDDV+D+++ RR ++ Sbjct: 182 GKRIRPTIVLLLSKALSSTVHG-SQLKLAEIVEMIHTASLVHDDVIDEASTRRDVISINH 240 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 + N+ ++L GD+LL++A ++ ++ + E +S L EGE Q N V+ + Sbjct: 241 SYTNKLAILCGDYLLARASVVLSTIRNPDVTECMSTALAELVEGEFMQAK--SNGVVSFD 298 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 +YL KT L + + +++++G +++ +G NLG+AFQ+VDD+LDY G Sbjct: 299 NYLQKTYLKTGSLITNSCRSAAILSGADSNIINISTEFGKNLGLAFQIVDDLLDYTGSAE 358 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK--STINDGKISVENLKKAFIIMREN 277 E GK D G T PV+ A Q + EK + S I D VE K+ + + Sbjct: 359 ECGKATSVDLTLGLATAPVLYATQEFPQLEKLIKRKFSEIGD----VEEAKRLVAL---S 411 Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + T A Y +A SL LP S + L+ + + R Sbjct: 412 KGIEKTRNLAIEYCNRAIQSLLKLPQSESRDLLITLSHIVVTR 454 >gi|212550849|ref|YP_002309166.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549087|dbj|BAG83755.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 321 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 119/224 (53%), Gaps = 7/224 (3%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL+ GKR+RP+ TL + + + +A A E H TL+HDD++D++ LRRG+ Sbjct: 32 YLLSMKGKRIRPIFTLMACRLFQENIKCAIDVALAWEIFHNFTLMHDDIIDNAFLRRGQS 91 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA---LEALSLVACTLAEGELRQLSLSK 152 W ++L GD +L A+ + ++ Q L S +A + EG+ + L Sbjct: 92 TVHTKWNKTIALLAGDSMLILAYKYIAKSPLQYRDILLHLFSSIAAKVCEGQAYDMLLEN 151 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 LDV +++YL +++ KTA L SA L +++ G + L+ +G+NLGIAFQ+ DD+L Sbjct: 152 RLDVRKKEYLELVRLKTATLLSACLYSGAIVGGASGQDAKFLQDFGINLGIAFQIQDDML 211 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN---FW 253 D G + GK IG D + + T +I A + E+ FW Sbjct: 212 DVYGN-SSFGKEIGSDIFSNRRTYLLINALNICDEMERKELLFW 254 >gi|312065737|ref|XP_003135935.1| polyprenyl synthetase [Loa loa] gi|307768907|gb|EFO28141.1| polyprenyl synthetase [Loa loa] Length = 370 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/288 (29%), Positives = 143/288 (49%), Gaps = 21/288 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATAL---------MLEYRGD-----NHVLLACAIEFIHTA 77 ++ KY GGK RP + L A ML G N +A E IHTA Sbjct: 68 EMAKYYFDQGGKLFRPTICLLMARACNQFEPKSMLVDSGRETVTRNQYKIAVISEMIHTA 127 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +L+HDDV+D + +RRG +WGN+ +VLVGDF+L++A ++ + ++ + Sbjct: 128 SLVHDDVIDKADIRRGSRTVNALWGNKMAVLVGDFILARATQVLCSIGRPSVISVMATII 187 Query: 138 CTLAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L +GE Q++ +L+ T+ Y+ SKTA LF+ + + +++++ V + + Sbjct: 188 EDLVKGEFMQMNDGTDLNATQRFNKYMAKTYSKTASLFANSCKSAAMLSDVSEADELSAY 247 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 YG +LGIAFQ++DD+LDY + GK D + G T PV+ A + + K +S Sbjct: 248 EYGKSLGIAFQMIDDLLDYVSTSSVAGKPTANDLKLGLATAPVLFAAEEYPELNKLITRS 307 Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 +G + + A+ I+ + L T A + + A +R P+ Sbjct: 308 FSKEGDVEL-----AWEIVGNSTGLQKTRTAAREHAEHAVKMVRNFPN 350 >gi|329938270|ref|ZP_08287721.1| putative polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus M045] gi|329302759|gb|EGG46649.1| putative polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus M045] Length = 347 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 3/207 (1%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGK +RP LTL +A+ + ++ V A A+E +H TLLHDDV+D LRR + AA Sbjct: 61 GGGKSVRPALTLLSAMAVGGSAESAVPGAVAVELVHDFTLLHDDVIDGDDLRRHRPAAWS 120 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAEGELRQLSLSKNLDV 156 V+G +VL GD LL A ++ +T+ Q A++ L L EG+ R ++ K +V Sbjct: 121 VFGTPAAVLTGDALLVAAMRVLTDTQQQRMAVAVKELVDALLELVEGQSRDVAYEKAPEV 180 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + YL + + KT L A + ++AG + L+ +G LG+AFQ DDVL G Sbjct: 181 SVAQYLAMAEGKTGSLMGCAAALGGVLAGADEVRVRGLREFGRRLGVAFQCADDVLGIWG 240 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + GK +G D K +LPV+ A + Sbjct: 241 HTSRSGKPVGGDLAARKKSLPVVTALE 267 >gi|149634722|ref|XP_001506831.1| PREDICTED: similar to PDSS1 protein [Ornithorhynchus anatinus] Length = 398 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 152/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + ++ +Y GK RP++ + A DN Sbjct: 81 LGRRDLKNLYEDIKKELLVSTTELKEMCEYYFDGKGKAFRPIIVVLMARACNVHHDNSRD 140 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GDF+LS A Sbjct: 141 VQASQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNQIWGEKKAVLAGDFILSAASV 200 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 201 ALARIGNTTIVSVLTQVLEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 260 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ +++GK D + G T PV+ Sbjct: 261 VSILGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTACTDQLGKPTAADLKLGLATGPVL 320 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G ++++A + ++ + T Y A Y +A + Sbjct: 321 FACQQFPEMNAMIMRRFSLPG-----DVERARQYVLQSDGVQQTTYLAQRYCHEAIREIS 375 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S +++L+++ + L R Sbjct: 376 KLRPSPEREALIQLTEVVLTR 396 >gi|1749738|dbj|BAA13926.1| unnamed protein product [Schizosaccharomyces pombe] Length = 356 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/266 (30%), Positives = 143/266 (53%), Gaps = 32/266 (12%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALML--------- 57 ++E+++ I + + S+ E + + KY + GK++RP L L AT+L Sbjct: 40 ELEQISPGIRQMLNSNSEFLEECSKYYTIAQGKQMRPSLVLLMSKATSLFHGIDRSVVGD 99 Query: 58 EYRGDN-------------HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 +Y D+ + LA E IH A+LLHDDV+D + +RRG ++ + +GN+ Sbjct: 100 KYTDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHDDVIDHANVRRGSPSSNVAFGNR 159 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS---KNLDVTEEDY 161 S+L G+F+L++A ++ ++ + E L+ V L GE QL + +L++ + ++ Sbjct: 160 RSILAGNFILARASTVMARLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSLEIKQSNF 219 Query: 162 LHVIKS---KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + I+ KTA L S + + S+++ +V A YG +G AFQL+DDVLDY + Sbjct: 220 DYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLDYTSKD 279 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQR 244 + +GK G D + G T PV+ A+++ Sbjct: 280 DTLGKAAGADLKLGLATAPVLFAWKK 305 >gi|227533817|ref|ZP_03963866.1| possible trans-hexaprenyltranstransferase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188547|gb|EEI68614.1| possible trans-hexaprenyltranstransferase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 312 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/289 (31%), Positives = 142/289 (49%), Gaps = 6/289 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +++ I +GGK LR L L A + D+ + AIE +H ATL+HDDV+D + LRR Sbjct: 27 LIQQQINAGGKMLRSGLMLMLARLGNPDNDDLITAGAAIEALHLATLVHDDVLDHADLRR 86 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-LEALSLVACTLAEGELRQLSLS 151 G GN+ ++ GDFL + F ++ E L + V + GE+ Q S Sbjct: 87 GSDTVSAKSGNREAIYAGDFLFAIYFQLLSEQNPATTDLATNARVMKHIFMGEVDQNGPS 146 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 L + +YL I KTA LF+ A + I + + ++A +G LG+AFQ++DD+ Sbjct: 147 APLIPSVSEYLKAIAGKTAALFALATYTGATIGQLDFTEKKAAYRFGRQLGMAFQMIDDL 206 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LDY + K + ED NG TLP+I A+Q ++ + KI+ + + A Sbjct: 207 LDYTQTTATLNKPVLEDLHNGIVTLPLIYAYQNVPEQLAPLVGTA---AKIAANSDRIAA 263 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I+ L A Y KA ++L LPD+ K+ L ++ L+R Sbjct: 264 IV--SEHGLPQARQLATRYTDKAINALAPLPDARIKQELRKLTQQLLRR 310 >gi|198276974|ref|ZP_03209505.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135] gi|198270499|gb|EDY94769.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135] Length = 327 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 88/268 (32%), Positives = 140/268 (52%), Gaps = 15/268 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA 89 D ++Y++ GGKRLRP+L L + Y+ D + A IE H TLLHDD++D + Sbjct: 31 DPIEYVLGLGGKRLRPVLMLLAYNL--YKEDVTRIFSQAAGIETYHNFTLLHDDLMDKAD 88 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA----LEALSLVACTLAEGEL 145 +RR K W T++L GD +L A+ +++ E +E A + EG+ Sbjct: 89 MRRNKPTVHKKWDENTAILSGDAMLILAYQFMMKECPLECVERVMEVFGRTALEVCEGQQ 148 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + LDVT ++Y+ +I+ KT+VL +AAL++ +++ G Q L +G+ +G+AF Sbjct: 149 WDMEFEHRLDVTVDEYIEMIRLKTSVLLAAALKIGAILGGAPEKDAQLLYDFGIKMGLAF 208 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRGTKREK--NFWKST--IND 259 QL DD LD G+ GK IG D K T +I L+ G +E N+ ++T + + Sbjct: 209 QLQDDYLDVYGDPAVFGKKIGGDILCNKKTFMLITALSLSEGEDKETLLNWLRATDYVAE 268 Query: 260 GKI-SVENLKKAFIIMRENRALVDTEYR 286 KI SV L + +A +DT Y+ Sbjct: 269 EKIQSVTALYNKVGVPELCQARIDTYYK 296 >gi|226305198|ref|YP_002765156.1| polyprenyl diphosphate synthase [Rhodococcus erythropolis PR4] gi|226184313|dbj|BAH32417.1| putative polyprenyl diphosphate synthase [Rhodococcus erythropolis PR4] Length = 349 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 96/324 (29%), Positives = 164/324 (50%), Gaps = 24/324 (7%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L D+E+ L++ + + + + +L +GGKR RP+ T+ TA + D ++ A Sbjct: 40 LSDVEE---LLVSELSDGEDFLTEAALHLARAGGKRFRPLFTILTAQLGPVPNDPSIITA 96 Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 + E +H ATL HDDV+D++++RRG +A WGN ++L GD+L + A +V S Sbjct: 97 ATVTELVHLATLYHDDVMDEASMRRGAPSANARWGNSVAILAGDYLFAHASRLV----ST 152 Query: 128 EALEALSLVACTLAE---GELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 EA+ ++A T AE G++R+ + + K D E YL V+ KT L +A+ Sbjct: 153 LGPEAVRIIAETFAELVTGQMRETIGVKKEQDPVEH-YLKVVWEKTGSLIAASGRFGGTF 211 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G + + L+ G +G AFQ+ DD++D + GK G D R G TLPV+ AF Sbjct: 212 SGADAAHIERLERLGDAVGTAFQISDDIIDISSVSAQSGKTPGTDLREGVHTLPVLYAF- 270 Query: 244 RGTKREKNFWKSTIND---GKISVENLKKAFIIMRENRA--LVDTEYRAYSYGQKAKDSL 298 RE+ + + G ++ E+ + R+ +V + + Y AK L Sbjct: 271 ----REEGADADRLRELLAGPVT-EDALVEEALELLERSPGMVKAKAKLGEYAVSAKAQL 325 Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322 LP ++L+ +VD+ ++R+ Sbjct: 326 AELPQGPANEALVRLVDYTIERVG 349 >gi|317420115|emb|CBN82151.1| Decaprenyl-diphosphate synthase subunit 1 [Dicentrarchus labrax] Length = 422 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 96/328 (29%), Positives = 156/328 (47%), Gaps = 14/328 (4%) Query: 2 KMLEDLTL--KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 K+ + TL KD++ + I K + E + + Y GK +RP++ + A L Sbjct: 98 KLKDPFTLANKDLQSLFDDIRKELFVTKEELKSLCDYYFDGKGKAIRPIIVILMARALNI 157 Query: 60 R----GD---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112 GD LA E IHTA+L+HDDV+D S RRGK +WG + ++L GD Sbjct: 158 HSNRAGDLLPGQRALAMISEMIHTASLVHDDVIDGSDKRRGKRTINDMWGERKAILAGDL 217 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 +LS A ++ + ++ +S V L GE QL +N + + YL KTA L Sbjct: 218 ILSAASVLLARIGNNAVVKVMSQVIEDLVRGEFMQLGSKENENERFKHYLEKTFKKTASL 277 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + + + S++ V + YG N+GIAFQLVDDVLD+ + +GK D + G Sbjct: 278 IANSCKAVSILVTSDPEVHEIAYQYGKNVGIAFQLVDDVLDFTSGASHLGKPTAADLKLG 337 Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292 T PV+ A Q+ + + + G + +A+ + ++ + T Y A Y Q Sbjct: 338 LATGPVLFACQQFPELHAMIIRRFSSKGDVD-----RAWQYVLQSDGVQQTNYLAQRYCQ 392 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +A + L S+ + +L+ + + L R Sbjct: 393 EAIRQINRLRPSAERDALIRLTEMVLTR 420 >gi|313894537|ref|ZP_07828101.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412] gi|313440933|gb|EFR59361.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412] Length = 292 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 13/236 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 + Y + GGKR+RP+L+ A ML ++ CA+E IHT +L+HDD+ +D+ R Sbjct: 35 MNYSLMQGGKRIRPILSKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYR 94 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--TLAEGE----- 144 RG + V+G ++L GD LL+ AF ++ K+ A E L + C T A E Sbjct: 95 RGNLTNHKVYGEGLAILAGDGLLTYAFQLMTANKTATAQEKLDAIQCVATAAGPEGMVGG 154 Query: 145 --LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 LS +K++ + E LH + KT LF+A++E+ ++ + R AL Y LG Sbjct: 155 QAFDMLSENKHIPLEELQVLH--RGKTGALFNASVELGLILGNADTATRTALMKYANCLG 212 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + FQ+ DD+LD G + E+GK G D R K T +L + ++ + K N Sbjct: 213 LLFQITDDILDVTGTIEELGKTPGSDIRQHKSTYVSLLGLEGAKEQAASVGKQAHN 268 >gi|145220349|ref|YP_001131058.1| geranyltranstransferase [Prosthecochloris vibrioformis DSM 265] gi|145206513|gb|ABP37556.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Chlorobium phaeovibrioides DSM 265] Length = 335 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 3/290 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +Y++ GKR+RP LTL + + DN + +A A+E +H TL+HDD++D++ LR Sbjct: 44 ARYILEGKGKRIRPFLTLLASEAVSGSSDNTMKVALAVEVLHNFTLMHDDIMDEADLRHN 103 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQLSL 150 + W + ++L GD +++ ++ + ++ +S E + L+ T+ EG+ + L Sbjct: 104 RPTVHRKWDDNVAILSGDMMIAYSYELALQAESHRHCELIHILNHANITICEGQALDMEL 163 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 D T DYL +I KT L SAALE + A +L ++G +G AFQ+ DD Sbjct: 164 EDKTDATIADYLDMISKKTGRLISAALEAGGVAADATKEQLMSLVTFGEKIGRAFQIQDD 223 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 LD E + GK G D NGK T ++ + + + + + S + I E + + Sbjct: 224 YLDIMAENGKSGKMTGGDVINGKKTYLLLRSLELTSGEDHDLLHSIYMNKGIEKERVPEI 283 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I L +T + ++A L LP + L + ++R Sbjct: 284 KAIFERCGVLEETARLINTDTEEALSVLENLPHPEGRDYLRGFANILMKR 333 >gi|289435907|ref|YP_003465779.1| polyprenyl synthetase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172151|emb|CBH28697.1| polyprenyl synthetase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 326 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/216 (38%), Positives = 115/216 (53%), Gaps = 10/216 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 VK LI +GGK LRP L +A ++ D V +A A+E +H ATL+HDDVVDDS LRR Sbjct: 39 VKDLIHAGGKLLRPAFALLSAQAGPDFDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRR 98 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLS 149 G +G +V GD+L C I + ++E + + + + GEL Q+ Sbjct: 99 GIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHASSVENIEFNSKNIEKILMGELDQMR 156 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY--GMNLGIAFQL 207 S +DVT +YL I KTA LF AL S G + S K Y G LG+AFQ+ Sbjct: 157 TSYKMDVTVREYLTRISGKTAQLF--ALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQI 214 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +DDVLDY +GK + D + G +LP+I A + Sbjct: 215 IDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 250 >gi|326692210|ref|ZP_08229215.1| heptaprenyl diphosphate synthase, component II, putative [Leuconostoc argentinum KCTC 3773] Length = 324 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 8/217 (3%) Query: 39 FSGGKRLRPMLTLA-TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 + GK +RP LTL + L + L ++E +H ATL+HDD++D+S LRRG + Sbjct: 38 LNAGKLVRPALTLIFSKLTTTPYNQQAIQLGASVELLHLATLIHDDIIDESKLRRGYESI 97 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-LAEGELRQLSLSKNLDV 156 + +G T+V GD+LL+ F ++ +T +A L+L A + GEL Q N+D Sbjct: 98 QSRFGKDTAVYAGDYLLTGMFSLLEQTSLPQA-NQLALTALQDILFGELVQKHHRFNVDA 156 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 T + YL IK KTA LF ++ LI+G + + ++ + G NLGI FQL+DD LD+ Sbjct: 157 TFDTYLSQIKGKTAALFKLSVTF-GLISGQAIADDLQDTVSQLGENLGITFQLLDDYLDF 215 Query: 215 RGEVNE--MGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + +GK IG+D RNG T PV+ A T R+ Sbjct: 216 ESITQQLSLGKPIGQDIRNGIYTAPVLFALTDPTVRD 252 >gi|78189407|ref|YP_379745.1| isoprenyl synthetase [Chlorobium chlorochromatii CaD3] gi|78171606|gb|ABB28702.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Chlorobium chlorochromatii CaD3] Length = 331 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/290 (27%), Positives = 143/290 (49%), Gaps = 3/290 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +Y++ GKR+RP LTL + D+ + +A A+E +H TL+HDD++D + LR G Sbjct: 40 ARYILEGKGKRIRPFLTLLACEAICGSPDDALDVALAVEILHNFTLIHDDIMDQAELRHG 99 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQLSL 150 + W ++L GD +++ A+ + +++K E + L+ T+ EG+ + L Sbjct: 100 RPTVHKTWNVSAAILTGDMMIAYAYELALQSKGSRQTELVHILNDANITICEGQALDMEL 159 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + D + DYL +I KT L SAALE + + ++L +G +G AFQ+ DD Sbjct: 160 EEMPDASMSDYLDMIAKKTGRLISAALEAGGVAGNATDEQLRSLVLFGEKIGQAFQIQDD 219 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 LD E + GK G D NGK T ++ + + + +++ S I + IS E + + Sbjct: 220 YLDIMAEAGKSGKMAGGDIINGKKTCLLLRSIELSSGTDRDLLLSIIANKGISAERVGEV 279 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I + L + S ++A ++ LP + + L + ++R Sbjct: 280 KAIYQRCGVLDEIAALINSATEEALSAVDNLPYAEGRDHLKGFANILMKR 329 >gi|258540369|ref|YP_003174868.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus Lc 705] gi|257152045|emb|CAR91017.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus Lc 705] Length = 322 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/291 (31%), Positives = 140/291 (48%), Gaps = 6/291 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +++ I +GGK LR L L A E V AIE +H ATL+HDDV+D + +RR Sbjct: 37 LIQQQINAGGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDVLDHADIRR 96 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-LEALSLVACTLAEGELRQLSLS 151 G GN+ ++ GDFL + F ++ E + L + + + GE+ Q S Sbjct: 97 GMTTVSAESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNARIMKRIFMGEVDQNGPS 156 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 L T YL I KTA LF+ A + I + + ++A +G LG+AFQ++DD+ Sbjct: 157 APLIPTVNAYLSAISGKTAALFALATYTGATIGHLSATQKKAAYRFGRQLGMAFQMIDDL 216 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LDY + K ED NG TLP+I A+Q + K+ + N + Sbjct: 217 LDYTQTAKTLNKPALEDLNNGIVTLPLIYAYQTVPDQLTPLTKT----AEQIAANADEIA 272 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 I+R++ L A++Y +A +L LP S K +L ++ LQR + Sbjct: 273 AIVRKH-GLPQAHQLAFTYTHRAIAALNPLPSSPTKAALTKLTQQLLQRTH 322 >gi|126653065|ref|ZP_01725200.1| YqiD [Bacillus sp. B14905] gi|126590166|gb|EAZ84290.1| YqiD [Bacillus sp. B14905] Length = 293 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 25/274 (9%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + + +E+ F ++ +I + V++ D + Y + +GGKR+RP+ LA + + Sbjct: 5 LKYFIESNIPQIEETMFALVSKIDAPVDL-KDSMLYSLKAGGKRIRPLFVLAVLELYQKN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + +++ IE IHT +L+HDD+ +D+ RRGK V+G + L GD L + AF Sbjct: 64 LQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLAF 123 Query: 119 CMV--IETKSQEALEALSLVACTLA------------EGELRQLSLSKNLDVTEEDYLHV 164 ++ +E +++ +E + L++ EGE RQL D+TE + +HV Sbjct: 124 GILARMEVTAEKRIELVQLLSVAAGAEGMVGGQVLDMEGEQRQL------DLTELEQVHV 177 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 +KT L ++E +++A R LK Y ++G+AFQ+ DD+LD G E+GK Sbjct: 178 --NKTGALLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGKT 235 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 G+D + K T P +L ++ ++ IN Sbjct: 236 AGKDVASDKSTYPALLTLNGAKEKLAEHYQHAIN 269 >gi|255023966|ref|ZP_05295952.1| hypothetical protein LmonocyFSL_12090 [Listeria monocytogenes FSL J1-208] Length = 248 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 90/248 (36%), Positives = 133/248 (53%), Gaps = 11/248 (4%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 AIE IH A+++HDDVVDD+ LRRG+ + WGN ++ GDFL +++ + + K A Sbjct: 1 AIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTQIKDVAA 60 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + LS V L+ GE+ QL N D + +YL IK KTA+L +A+ + +++G + Sbjct: 61 HKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEA 120 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 Q L +G +G+AFQ+ DDVLD+ G E+GK GED R G TLPV A E Sbjct: 121 DYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAM------E 174 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRE---NRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 F K I+ +I+ E + ++ E E A +Y +KA + L LP Sbjct: 175 DPFLKKRIS--QITEETPAEEIAVLVEEVKKSGAKQAEDIATAYLKKAVEILDSLPQVPE 232 Query: 307 KKSLMEVV 314 K L ++V Sbjct: 233 LKPLKQIV 240 >gi|229490670|ref|ZP_04384508.1| bifunctional short chain isoprenyl diphosphate synthase [Rhodococcus erythropolis SK121] gi|229322490|gb|EEN88273.1| bifunctional short chain isoprenyl diphosphate synthase [Rhodococcus erythropolis SK121] Length = 359 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 96/324 (29%), Positives = 164/324 (50%), Gaps = 24/324 (7%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L D+E+ L++ + + + + +L +GGKR RP+ T+ TA + D ++ A Sbjct: 50 LSDVEE---LLVSELSDGEDFLTEAALHLARAGGKRFRPLFTILTAQLGPVPNDPSIITA 106 Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 + E +H ATL HDDV+D++++RRG +A WGN ++L GD+L + A +V S Sbjct: 107 ATVTELVHLATLYHDDVMDEASMRRGAPSANARWGNSVAILAGDYLFAHASRLV----ST 162 Query: 128 EALEALSLVACTLAE---GELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 EA+ ++A T AE G++R+ + + K D E YL V+ KT L +A+ Sbjct: 163 LGPEAVRIIAETFAELVTGQMRETIGVKKEQDPVEH-YLKVVWEKTGSLIAASGRFGGTF 221 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G + + L+ G +G AFQ+ DD++D + GK G D R G TLPV+ AF Sbjct: 222 SGADAAHIERLERLGDAVGTAFQISDDIIDISSVSAQSGKTPGTDLREGVHTLPVLYAF- 280 Query: 244 RGTKREKNFWKSTIND---GKISVENLKKAFIIMRENRA--LVDTEYRAYSYGQKAKDSL 298 RE+ + + G ++ E+ + R+ +V + + Y AK L Sbjct: 281 ----REEGADADRLRELLAGPVT-EDALVEEALELLERSPGMVKAKAKLGEYAVAAKAQL 335 Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322 LP ++L+ +VD+ ++R+ Sbjct: 336 AELPQGPANEALVRLVDYTIERVG 359 >gi|313631736|gb|EFR98936.1| heptaprenyl diphosphate synthase component 2 [Listeria seeligeri FSL N1-067] Length = 291 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 84/216 (38%), Positives = 115/216 (53%), Gaps = 10/216 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 VK LI +GGK LRP L +A ++ D V +A A+E +H ATL+HDDVVDDS LRR Sbjct: 4 VKDLIHAGGKLLRPAFALLSAQAGPDFDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRR 63 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLS 149 G +G +V GD+L C I + ++E + + + + GEL Q+ Sbjct: 64 GIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHASSVENIEFNSKNIEKILMGELDQMR 121 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY--GMNLGIAFQL 207 S +DVT +YL I KTA LF AL S G + S K Y G LG+AFQ+ Sbjct: 122 TSYKMDVTVREYLTRISGKTAQLF--ALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQI 179 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +DDVLDY +GK + D + G +LP+I A + Sbjct: 180 IDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 215 >gi|27261729|gb|AAN86061.1| geranylgeranyl diphosphate synthase [Citrus unshiu] Length = 426 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 150/316 (47%), Gaps = 27/316 (8%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALMLEYRGDNH-------------- 64 + ++V + +Y G GKR RP +L +ATAL + H Sbjct: 107 VVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTR 166 Query: 65 -VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A E IH A+LLHDDV+DD+ RRG + V GN+ +VL GDFLLS+A + Sbjct: 167 QQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS 226 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ E + L+ V L GE Q++ S + + + Y+ KTA L S + + +L+ Sbjct: 227 LKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALL 286 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V YG NLG+A+QL+DDVLD+ G +GK D ++G T P++ A + Sbjct: 287 AGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIQHGIITAPILFAME 346 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP- 302 E ++ + G N+ A + ++R + T A + A ++ LP Sbjct: 347 -----EFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPE 401 Query: 303 --DSSWKKSLMEVVDF 316 D +KS ++D Sbjct: 402 NNDEDVRKSRRALLDL 417 >gi|330841866|ref|XP_003292910.1| hypothetical protein DICPUDRAFT_157686 [Dictyostelium purpureum] gi|325076811|gb|EGC30569.1| hypothetical protein DICPUDRAFT_157686 [Dictyostelium purpureum] Length = 465 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 89/289 (30%), Positives = 150/289 (51%), Gaps = 12/289 (4%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 KY GKR+RP +L L+ AL + + LA +E IHTA+L+HDDV+D+++ RR Sbjct: 184 KYYFELKGKRIRPTIVLLLSKALSANVQ-KTQIKLAEVVEMIHTASLVHDDVIDEASTRR 242 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 ++ + N+ ++L GDFLL++A ++ ++ + E +SL L EGE Q +K Sbjct: 243 DVLSINQSYSNKLAILCGDFLLARASLILSTIRNSDVTECMSLALAELVEGEFMQ---AK 299 Query: 153 NLDVTEED-YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + V+ D YL KT L + + +++++G ++ +G NLG+AFQ++DD+ Sbjct: 300 SSGVSSFDHYLKKTYLKTGSLITNSCRSAAILSGADQNIVNISTEFGKNLGLAFQIIDDL 359 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 LDY G + GK + D G T PV+ A Q + E + +G VE K+ Sbjct: 360 LDYTGSAEQCGKAVSVDLNLGLATAPVLFATQEFPQLEDLIKRKFSKEG--DVEEAKR-- 415 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ +++ + T A Y A +SL LP S + L+ + + R Sbjct: 416 -LVAQSQGIEKTRNLAIEYVNLAIESLLKLPQSDSRDLLIALSHTVVTR 463 >gi|21673095|ref|NP_661160.1| isoprenyl synthetase [Chlorobium tepidum TLS] gi|21646167|gb|AAM71502.1| isoprenyl synthetase [Chlorobium tepidum TLS] Length = 332 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 82/264 (31%), Positives = 132/264 (50%), Gaps = 11/264 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D +Y++ GKR+RP LTL A + + DN + +A IE +H TL+HDD++D + LR Sbjct: 39 DPARYILEGKGKRIRPFLTLLAAEAVSGKSDNALGVALGIEVLHNFTLMHDDIMDQADLR 98 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMV---IETKSQEALEALSLVACTLAEGELRQL 148 G+ W ++L GD +++ A+ + I ++ E + + T+ EG+ + Sbjct: 99 HGRPTVHKQWNVNAAILSGDMMIAYAYELALKAISSRHAEIIHIFNDANITICEGQALDM 158 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 L + DVT DYL +I KT L SAALE + AL ++G +G AFQ+ Sbjct: 159 ELEQRKDVTIADYLDMISKKTGRLISAALEAGGVAGDGTPEQIAALVTFGEKIGRAFQIQ 218 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD LD + GK G D NGK T ++ + + ++ +S ++ S +N+ Sbjct: 219 DDYLDIMAGDGKSGKVPGGDVINGKKTWLLLRSLELAEGADRELLQSIFDNNGTSPDNVP 278 Query: 269 --KAFI----IMRENRALV--DTE 284 KA ++ E RA + DTE Sbjct: 279 AVKAIFEKCGVLNETRAKINEDTE 302 >gi|307945554|ref|ZP_07660890.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4] gi|307771427|gb|EFO30652.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4] Length = 141 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 59/140 (42%), Positives = 88/140 (62%) Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IA S++ A ++YG+ LG AFQ+VDD LDY G ++GK++G+DFR GK TLPV+LA Sbjct: 1 MIADQDASMKAAARTYGLELGFAFQMVDDALDYGGTSADLGKDVGDDFREGKITLPVVLA 60 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 +RGT ++ FWK + D I +L +A +M + A+ DT RA YG A +L L Sbjct: 61 VKRGTDEDRAFWKRCLEDNDIRDGDLDQAIALMTKYDAISDTVQRARDYGASAMSALDQL 120 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 P+ + +L + V FC+ R+ Sbjct: 121 PEGPHRDALADAVAFCIARV 140 >gi|15828220|ref|NP_302483.1| polyprenyl diphosphate synthase component [Mycobacterium leprae TN] gi|221230697|ref|YP_002504113.1| polyprenyl diphosphate synthase component [Mycobacterium leprae Br4923] gi|13093913|emb|CAC31793.1| polyprenyl diphosphate synthase component [Mycobacterium leprae] gi|219933804|emb|CAR72375.1| polyprenyl diphosphate synthase component [Mycobacterium leprae Br4923] Length = 330 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 92/301 (30%), Positives = 154/301 (51%), Gaps = 17/301 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVD 86 E++ + V +L +GGKR RP+ T+ +A + V++A A IE +H A+L HDDV+D Sbjct: 37 EVMTESVLHLFAAGGKRFRPLFTVLSAQIGPRPDAPEVIIAGAVIELVHLASLYHDDVMD 96 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---G 143 ++ +RRG +A L W N ++L GD+L + A +V SQ L+A+ ++A T A+ G Sbjct: 97 EAEVRRGAPSANLRWSNSVAILAGDYLFATASRLV----SQLGLDAVRIIADTFAQLVTG 152 Query: 144 ELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 ++R+ + + D E+ YL V+ KT L +A + L AG + L G +G Sbjct: 153 QMRETRGVPEGADSIEQ-YLKVVYEKTGCLIGSAGRLGGLFAGAHAEQVERLSRLGSIVG 211 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR---GTKREKNFWKSTIND 259 AFQ+ DD++D + + GK G D R G TLP++ A + ++R + +++ Sbjct: 212 TAFQISDDIIDIDSDYTKSGKLPGTDVREGVRTLPILYALRETGPDSERLRALLAGPVDN 271 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 VE A ++R + + Y +A L LPD + +L +VD+ Sbjct: 272 DAEVVE----ALALLRASPGMARARQVLAHYADQASGELAQLPDGPSRDALATLVDYTTN 327 Query: 320 R 320 R Sbjct: 328 R 328 >gi|313158272|gb|EFR57674.1| polyprenyl synthetase [Alistipes sp. HGB5] Length = 373 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/267 (28%), Positives = 142/267 (53%), Gaps = 9/267 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-----YRGDNHV 65 ++E + + ++ ++ E++ D+++Y + S GK +RP+L L +A M +G Sbjct: 58 ELEAFDEFVDRQFTAEGELLSDMLRYALSSRGKGIRPLLVLLSAAMNSPVAEAAKGRRVH 117 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 L A +E IH A+L+HDDV+D++ +RRGK +A W + +V++GD++L++ + + + Sbjct: 118 LAAMLVEMIHVASLIHDDVIDEADMRRGKPSANARWQSHKAVILGDYILARNLSIGLTSG 177 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + + + L EGE+ Q ++ +T + YL +I KTA L + ++ G Sbjct: 178 QFDLVTHVCGSMAALCEGEVLQSECAEKHTMTRQAYLDIIYKKTACLIGVSASAGAMAVG 237 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 ++ +G +G+AFQ+ DD+LDY GK D R GK TLP++ + Sbjct: 238 ASQQKVALMRRFGEAVGMAFQIQDDILDYT-RTAHTGKPANNDLREGKITLPLLAVLDKA 296 Query: 246 T--KREKNFWK-STINDGKISVENLKK 269 +R + + + +D + SVE L++ Sbjct: 297 PAERRTELLGRLACCHDDEESVEYLQR 323 >gi|298206983|ref|YP_003715162.1| putative isoprenoid biosynthesis related protein [Croceibacter atlanticus HTCC2559] gi|83849617|gb|EAP87485.1| putative isoprenoid biosynthesis related protein [Croceibacter atlanticus HTCC2559] Length = 324 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 3/225 (1%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + + Y++ GGKRLRP+L L + + A A+E H +L+HDD++DD Sbjct: 25 ENLYEPISYILNLGGKRLRPILVLMATEIFGEDYTKGLDAALAVEVFHNFSLVHDDIMDD 84 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACTLAEGE 144 + LRRGK W T +L GD +L A+ + + +E + + A + EG+ Sbjct: 85 APLRRGKDTVHEKWDLNTGILSGDAMLINAYQLFENYDGSTFKELAKLFTKTAIEVCEGQ 144 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + DVT +YL +I+ KTAVL AAL++ +++A ++S + + +G LG+A Sbjct: 145 QYDIDFETRDDVTIPEYLKMIEFKTAVLVGAALQMGAIVANAEDSCKDKIYEFGCLLGLA 204 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 FQL DD LD G+ GK +G D K T + A + TK + Sbjct: 205 FQLQDDYLDAFGDPKTFGKQVGGDIIENKKTFLYLKAIENSTKED 249 >gi|329116532|ref|ZP_08245249.1| polyprenyl synthetase [Streptococcus parauberis NCFD 2020] gi|326906937|gb|EGE53851.1| polyprenyl synthetase [Streptococcus parauberis NCFD 2020] Length = 326 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 88/288 (30%), Positives = 139/288 (48%), Gaps = 13/288 (4%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDVVDDSALRRGKVA 96 +GGK LRP + + N L A ++E +H ATL+HDDV+DDS LRRG+ Sbjct: 43 AGGKYLRPAFFFFFSQFGDQEQKNRDQLRQIAASLEILHMATLIHDDVIDDSPLRRGQKT 102 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-TLAEGELRQLSLSKNLD 155 + +G +V GDFL + F +++E+ ++ A + GEL Q+ L N + Sbjct: 103 IQTQFGKDVAVYTGDFLFTIFFELILESMQDSPYMTINAKAMKQILIGELEQMELYFNQE 162 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 E YL I KTA LF A + + AG V G ++G+ FQ++DD+LDY Sbjct: 163 QDVESYLTAISGKTAELFQLASQEGAYFAGASQDVVSLAGRIGHHIGMTFQILDDILDYT 222 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF---WKSTINDGKISVENLKKAFI 272 + K + ED NG +LP++LA ++ K + + ++ V+ L + Sbjct: 223 ADPKTFNKPVLEDLCNGVYSLPLLLAMKKNPAAFKPLLDKQRDMTSADRLQVKELVLTYG 282 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + E +AL A Y +KA + LP +K L++V L+R Sbjct: 283 GVEEAKAL------ANKYTEKALADIEQLPKIKAQKQLLKVTKELLKR 324 >gi|320593030|gb|EFX05439.1| hexaprenyl pyrophosphate synthetase [Grosmannia clavigera kw1407] Length = 556 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 92/264 (34%), Positives = 133/264 (50%), Gaps = 18/264 (6%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RRG +A L +GN+ +VL GDFLL +A + ++ Sbjct: 299 LAEITELIHTASLLHDDVIDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALARLRN 358 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNL----------DVTEEDYLHVIKSKTAVLFSAA 176 E +E LS V L EGE QL KN + T + YL KTA L S + Sbjct: 359 AEVVELLSTVIANLVEGEFMQL---KNTARDETNPVWSEATLQYYLQKTYLKTASLISKS 415 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++L+ G A +YG NLG+AFQLVDD+LDY ++GK G D G T Sbjct: 416 CRAAALLGGADAQTVDAAYAYGKNLGLAFQLVDDMLDYTRSAKDLGKPAGADLELGLATA 475 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 P++ A+ RE + + ++ +A I+ + + T A Y ++A Sbjct: 476 PLLFAW-----RENPELGALVGRKFAQPGDVARAREIVLASDGVEQTRALAQDYAEQAIA 530 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 ++ P+S K L+E+ L+R Sbjct: 531 AISAFPESDAKNGLVEMAIKTLKR 554 >gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002] gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002] Length = 302 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 79/238 (33%), Positives = 115/238 (48%), Gaps = 10/238 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKRLRP+L LA ML + ACA+E IHT +L+HDD+ +D+ Sbjct: 40 IYEAMRYSLLAGGKRLRPILCLAACEMLGGTAAMAMNTACALEMIHTMSLIHDDLPAMDN 99 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACT 139 LRRGK V+G ++L GD LLS AF V T A L ++ A Sbjct: 100 DDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDVPAERLLQVIVRLGQAVGAEG 159 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 L G++ L DV E + KT L + +++AG + Q L Y Sbjct: 160 LVGGQVVDLESEGKTDVAVETLNFIHTHKTGALLEVCVTAGAILAGAKPEEVQLLSRYAQ 219 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 N+G+AFQ+VDD+LD E+GK G+D K T P + ++ + I Sbjct: 220 NIGLAFQIVDDILDITATAEELGKTAGKDLEAQKVTYPSLWGIEKSQAEAQKLVAEAI 277 >gi|239928074|ref|ZP_04685027.1| putative polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC 14672] Length = 341 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 116/219 (52%), Gaps = 2/219 (0%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 +D + P +V +L+ +GGKRLRP+L L A + G+ V A E +H ++L HDD Sbjct: 45 AADPRVAP-LVGHLVTTGGKRLRPLLVLLGAEFGDPEGEGVVDAAVLAELVHVSSLYHDD 103 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 V+DD+ +R G +A WGN+ +V GD+LL+QA + + A+ ++ A L G Sbjct: 104 VIDDAGIRHGADSANARWGNRRAVFAGDWLLAQAAQLSCALGPR-AVRLNAVTADRLVRG 162 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + +L + YL V K+A L +L++ +L AG + L YG LG+ Sbjct: 163 QALELLGPGPGTAPLDHYLRVTAGKSASLIVLSLQLGALQAGAPEAYADVLAEYGEQLGL 222 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AFQ+ DD+LD + GK G D G +LPV+LA Sbjct: 223 AFQMSDDILDITSPASASGKEPGMDLEAGVLSLPVLLAL 261 >gi|290891826|ref|ZP_06554823.1| polyprenyl synthetase [Listeria monocytogenes FSL J2-071] gi|290558420|gb|EFD91937.1| polyprenyl synthetase [Listeria monocytogenes FSL J2-071] Length = 326 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 88/240 (36%), Positives = 126/240 (52%), Gaps = 10/240 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLA 68 KD+++V I + I + + VK LI +GGK LRP L +A +Y D V +A Sbjct: 15 KDLQEVLQTIEENIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVSIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H ATL+HDDVVDDS LRRG +G +V GD+L C I + Sbjct: 75 AALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHAS 132 Query: 129 ALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++E + + + + GEL Q+ S ++VT +YL I KTA LF AL S G Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLF--ALSCYSGATG 190 Query: 186 VQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + K Y G LG+AFQ++DDVLDY +GK + D + G +LP+I A + Sbjct: 191 SKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 250 >gi|294791863|ref|ZP_06757011.1| geranyltranstransferase [Veillonella sp. 6_1_27] gi|294457093|gb|EFG25455.1| geranyltranstransferase [Veillonella sp. 6_1_27] Length = 292 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 79/241 (32%), Positives = 125/241 (51%), Gaps = 13/241 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L + E + + + Y + GGKR+RP+LT A ML ++ CA+E IHT + Sbjct: 20 VLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYS 79 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET---KSQEALEAL 133 L+HDD+ +D+ RRG + V+G ++L GD LL+ AF ++ +Q+ L+A+ Sbjct: 80 LVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTSNTVASAQQKLDAI 139 Query: 134 SLVACTLA-EG-----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 VA EG LS K++ + E LH KT LF+A++E+ ++ Sbjct: 140 KCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHT--GKTGALFNASVELGLILGSAN 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 N+ R AL Y LG+ FQ+ DD+LD G + E+GK G D R K T +L ++ Sbjct: 198 NTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHKSTYVSLLGLEQAKH 257 Query: 248 R 248 + Sbjct: 258 Q 258 >gi|227892929|ref|ZP_04010734.1| trans-hexaprenyltranstransferase [Lactobacillus ultunensis DSM 16047] gi|227865267|gb|EEJ72688.1| trans-hexaprenyltranstransferase [Lactobacillus ultunensis DSM 16047] Length = 326 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 158/298 (53%), Gaps = 7/298 (2%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L ++E+VN I K I + + + + + +GGK LRP L L A + + + Sbjct: 12 LIANELEEVNDFIQKTIKTPHKSLQAALLQMADNGGKYLRPSLLLLAAHAVGKTNERTIK 71 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +IE +H ATL+HDD++DDS RRG V+ + +G +V GD L + F ++++ Sbjct: 72 LASSIEILHMATLIHDDIIDDSDERRGNVSIQAAFGKDVAVYTGDLLFTDFFDLMLDAID 131 Query: 127 QEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E L A T+ + GEL Q++ NL T +DYL +K KTA LF A E + Sbjct: 132 EH--EYLVRNAQTMRKILNGELGQMAERFNLKQTLDDYLRDVKGKTAALFRLAAEEGAHF 189 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + AL +G NLGIAFQ+VDD+LDY G + ++ K ED G +LP++LA Sbjct: 190 AGANSMQSDALAQFGENLGIAFQMVDDILDYSGGI-QLNKPTLEDLATGVYSLPLLLALN 248 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + ++ ++++ +++K I+ + + D+ A Y Q+A D L+ Sbjct: 249 QPALHDE-LLSLLKKKRQMTLADMQKVQNILLNSSVINDSRKLAQEYAQRADDCLKIF 305 >gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9] gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9] Length = 294 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 81/233 (34%), Positives = 130/233 (55%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 ++I + +KY +F+GGKRLRP+L L++ + E + +ACAIE IHT +L+HDD+ + Sbjct: 28 QIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDIKKALPVACAIELIHTYSLIHDDLPAM 87 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK------SQEALEALSLVA-- 137 D+ LRRGK V+G ++L GD LL+ AF ++I Q L+A + +A Sbjct: 88 DNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFEVLIRHALENPHDYQRILKATNEIARA 147 Query: 138 --CT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 C + G++ + LS+N +T E+ + + KT L A++ + IAG AL Sbjct: 148 SGCKGMIGGQVVDI-LSQNTKLTYEELKFMHEHKTGALIEASVCAGAYIAGAIEEDIHAL 206 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + Y +G+AFQ+ DD+LD GE ++GK +G D GK T I ++ + Sbjct: 207 REYASLIGLAFQIKDDILDVIGEEEKLGKKVGSDREKGKVTFVNIFGLKKSQQ 259 >gi|330998275|ref|ZP_08322100.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841] gi|329568664|gb|EGG50465.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841] Length = 327 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 117/217 (53%), Gaps = 4/217 (1%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + ++Y++ GGKR+RP+L L + + + + A AIE H TLLHDD++D + +R Sbjct: 29 EPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEEIGFQAVAIEIYHNYTLLHDDLMDRADMR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSL---VACTLAEGELRQ 147 RG W + ++L GD +L A+ + + E L + +SL A + EG+ Sbjct: 89 RGMATVHKKWDDNAAILSGDSMLVMAYRYMQQGCPAEHLGDVMSLFTETALEIGEGQQYD 148 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + DV+EE+Y+ +I+ KT+VL + AL++ + + G + L +G NLG+AFQL Sbjct: 149 MEFEARADVSEEEYIEMIRLKTSVLLACALKIGAWLGGAPRQDAELLYRFGENLGLAFQL 208 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 DD LD G+ GK IG D K T +I A R Sbjct: 209 QDDYLDVYGDPAVFGKKIGGDILCNKKTYMLINALGR 245 >gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275] gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275] Length = 295 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 80/249 (32%), Positives = 133/249 (53%), Gaps = 21/249 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + SGGKRLRP+LTL ++ DN + A AIE IHT +L+HDD+ +D+ Sbjct: 32 IMEAMNYSLSSGGKRLRPVLTLEACRIVGGDTDNAIPFAAAIEMIHTYSLIHDDLPALDN 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAEG--- 143 LRRG+ V+G ++L GD LL+ A+ M+ E+ +E E +A+G Sbjct: 92 DDLRRGRATNHKVFGEAMAILAGDALLNFAYETMLKESIGKENPERYLRATYEIAKGAGI 151 Query: 144 ------ELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 ++ + S+N+ + +E DY+H ++KTA + + + I G + + Sbjct: 152 YGMVGGQVVDVQ-SENMQIPKEKLDYIH--ENKTAAMMVGCMRAGAAIGGADEKQMELIT 208 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y +G+AFQ+VDD+LD G+ ++GK++G D N K T P ++ G ++ + Sbjct: 209 DYANKIGLAFQIVDDILDIVGDEAKLGKHVGSDIENNKSTYPSLM----GLEKSREIATE 264 Query: 256 TINDGKISV 264 I D K S+ Sbjct: 265 LIEDAKRSI 273 >gi|116874007|ref|YP_850788.1| polyprenyl synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742885|emb|CAK22009.1| polyprenyl synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 326 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 89/240 (37%), Positives = 126/240 (52%), Gaps = 10/240 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLA 68 KD+++V I K I + + VK LI +GGK LRP L +A E+ + V +A Sbjct: 15 KDLQEVLQTIEKNIQIRDKHVEKNVKDLIHAGGKLLRPAFALLSAQAGPEFDKERAVSIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H ATL+HDDVVDDS LRRG +G +V GD+L C I + Sbjct: 75 AALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHAS 132 Query: 129 ALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++E + + + + GEL Q+ S ++VT +YL I KTA LF AL S G Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLF--ALSCYSGATG 190 Query: 186 VQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + S K Y G LG+AFQ++DDVLDY +GK + D + G +LP+I A + Sbjct: 191 SKASRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDAGLGKPVLNDMKQGIYSLPLIYAMK 250 >gi|154286806|ref|XP_001544198.1| hypothetical protein HCAG_01245 [Ajellomyces capsulatus NAm1] gi|150407839|gb|EDN03380.1| hypothetical protein HCAG_01245 [Ajellomyces capsulatus NAm1] Length = 269 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/179 (41%), Positives = 101/179 (56%), Gaps = 7/179 (3%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RR V+A L +GN+ +VL GDFLL +A + + Sbjct: 84 LAEITELIHTASLLHDDVIDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVALARLRD 143 Query: 127 QEALEALSLVACTLAEGELRQLSLSK----NLDVTEED---YLHVIKSKTAVLFSAALEV 179 E +E LS V L EGE QL ++ N TE+ YL K+A L S + Sbjct: 144 PEVIELLSTVIANLIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLISKSCRA 203 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 ++L+ + +A SYG NLG+AFQLVDD+LDY +E+GK G DF P P Sbjct: 204 AALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTIHGDELGKPAGADFLLVVPAAPA 262 >gi|291436410|ref|ZP_06575800.1| trans-hexaprenyltranstransferase [Streptomyces ghanaensis ATCC 14672] gi|291339305|gb|EFE66261.1| trans-hexaprenyltranstransferase [Streptomyces ghanaensis ATCC 14672] Length = 338 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 116/219 (52%), Gaps = 2/219 (0%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 +D + P +V +L+ +GGKRLRP+L L A + G+ V A E +H ++L HDD Sbjct: 42 AADPRVAP-LVGHLVTTGGKRLRPLLVLLGAEFGDPEGEGVVDAAVLAELVHVSSLYHDD 100 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 V+DD+ +R G +A WGN+ +V GD+LL+QA + + A+ ++ A L G Sbjct: 101 VIDDAGIRHGADSANARWGNRRAVFAGDWLLAQAAQLSCALGPR-AVRLNAVTADRLVRG 159 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + +L + YL V K+A L +L++ +L AG + L YG LG+ Sbjct: 160 QALELLGPGPGTAPLDHYLRVTAGKSASLIVLSLQLGALQAGAPEAYADVLAEYGEQLGL 219 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AFQ+ DD+LD + GK G D G +LPV+LA Sbjct: 220 AFQMSDDILDITSPASASGKEPGMDLEAGVLSLPVLLAL 258 >gi|226361079|ref|YP_002778857.1| polyprenyl diphosphate synthase [Rhodococcus opacus B4] gi|226239564|dbj|BAH49912.1| putative polyprenyl diphosphate synthase [Rhodococcus opacus B4] Length = 351 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 91/317 (28%), Positives = 163/317 (51%), Gaps = 13/317 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +++V L++ + + + + +L +GGKR RP+ T+ TA + D V+ A + Sbjct: 42 LKQVEELLVSELSDGEDFLTEAALHLAKAGGKRFRPLFTVLTAQLGPKASDPSVVTAATV 101 Query: 72 -EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 E +H ATL HDDV+D++++RRG +A WGN ++L GD+L + A +V S Sbjct: 102 VELVHLATLYHDDVMDEASMRRGAPSANARWGNSVAILAGDYLFAHASRLV----STLGP 157 Query: 131 EALSLVACTLAE---GELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 EA+ ++A T AE G++R+ + L D E YL V+ KT L +A+ +G Sbjct: 158 EAVRIIAETFAELVTGQMRETIGLRGEQDPVEH-YLKVVWEKTGSLIAASGRFGGTFSGA 216 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + L+ G +G AFQ+ DD++D + GK G D R G TLPV+ A R Sbjct: 217 DADHVKRLERLGDAVGTAFQISDDIIDISSVSAQSGKTPGTDLREGVHTLPVLYAL-RDE 275 Query: 247 KREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 E + + + DG ++ + ++ +A ++ + + + + + A+ L LP Sbjct: 276 GPEADRLR-VLLDGPVTDDGDVAEALALLERSPGMAAAKAKLEEFAVSARAQLAELPQGP 334 Query: 306 WKKSLMEVVDFCLQRLN 322 +L+++VD+ ++R+ Sbjct: 335 ANDALVKLVDYTIERVG 351 >gi|327274790|ref|XP_003222159.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Anolis carolinensis] Length = 350 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 92/321 (28%), Positives = 153/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L KD++ + I K + + + ++ +Y GK RPM+ +A A ++ Sbjct: 33 LGRKDLKNLYEDIQKELRASTTDLREMCEYYFDGKGKAFRPMIVVLMARACNFHHKSSGE 92 Query: 65 VL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD+ RRGK+ VWG + +VL GDF+L+ A Sbjct: 93 VQASQRSIALIAEMIHTASLVHDDVIDDANSRRGKLTVNHVWGERKAVLAGDFILAVASQ 152 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ L GE QL +N + YL KTA L + + + Sbjct: 153 TLARIGNTTIVSVLTRAIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIAHSCKA 212 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++A V + YG N+GIAFQL+DDVLD+ ++GK D + G T PV+ Sbjct: 213 VSILACPDPKVHEIAYQYGKNIGIAFQLIDDVLDFTSCSEQLGKPTSADLKLGIATGPVL 272 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G ++++A + ++ + T Y A Y +A + Sbjct: 273 FACQQFPEINAMIMRRFNLPG-----DVQRAQEYVLQSGGIQQTTYLAQRYCHEAMREIS 327 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S + +L+++ + L R Sbjct: 328 KLRPSPERDALVQLAEIVLAR 348 >gi|289522987|ref|ZP_06439841.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503530|gb|EFD24694.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 298 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 81/233 (34%), Positives = 129/233 (55%), Gaps = 20/233 (8%) Query: 30 IPDV----VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV- 84 IP+V + Y + +GGKR+RP+L TA L D + LA AIE HTA+L+HDD+ Sbjct: 30 IPEVLCQCIAYSLLNGGKRIRPVLCQITAEKLGIDPDGVLPLAAAIEMAHTASLIHDDLP 89 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-------TKSQ--EALEALS 134 +D+ RRGK+ V+G +VL GD LL+ F + ++ T+S AL+ S Sbjct: 90 CMDNDDYRRGKLTNHKVYGEAMAVLAGDSLLAYGFELCLQELPRLGFTQSNILNALKIFS 149 Query: 135 --LVACTLAEGELRQLSLSKNLDVTEEDYL-HVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + C + G+ L +++ EE++L + + KTA L A++ S+ + G Sbjct: 150 HAIGPCGICGGQ--ALDITQEGHEGEEEFLWKMCELKTATLLRASITASAALVGAGEKTM 207 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L +YG +LGI+FQ++DD+LD G ++E+GK G+D + GK T + +R Sbjct: 208 SCLHNYGTHLGISFQIIDDILDVTGTISELGKTPGKDAKEGKLTFVALHGLER 260 >gi|308499861|ref|XP_003112116.1| CRE-COQ-1 protein [Caenorhabditis remanei] gi|308268597|gb|EFP12550.1| CRE-COQ-1 protein [Caenorhabditis remanei] Length = 396 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/239 (32%), Positives = 128/239 (53%), Gaps = 15/239 (6%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTA+L+HDDV+D++ RRG + VWGN+ SVLVGDF+L++A ++ + Sbjct: 146 EMIHTASLVHDDVIDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCSIGKPNVIS 205 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEE---DYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ + L GE Q+S + + ++ Y+ KTA LF+++ ++++A N Sbjct: 206 VMASIIEDLVLGEFMQMSATPSEATPQQRMNAYIEKTHRKTASLFASSCRSTAILADPNN 265 Query: 189 -SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ Q YG NLGIAFQL DD+LD+ +EMGK + D + G T PV+ A Q+ + Sbjct: 266 LNLHQTAYEYGRNLGIAFQLADDLLDFIATSDEMGKPVAADLKLGLATAPVLYASQQYPE 325 Query: 248 REKNFWKSTINDGKISVENLKKAFII---MRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + ++G E ++ + M + R L+D +Y QKA + LP+ Sbjct: 326 LITMLLRKFKHEGD--AEKAREIVVNSDGMDKTRQLID------AYSQKAIEMASSLPN 376 >gi|311739255|ref|ZP_07713092.1| trans-hexaprenyltranstransferase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305681|gb|EFQ81747.1| trans-hexaprenyltranstransferase [Corynebacterium pseudogenitalium ATCC 33035] Length = 334 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 159/323 (49%), Gaps = 26/323 (8%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACA 70 ME V + I + + D V +L +GGKR RPM+ L + G V+ A Sbjct: 26 MEAVEDKLRSEIDRGQDFLKDKVSHLSKAGGKRFRPMMALLASEYGPRPGCEEVVKAATV 85 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A ++ E + Sbjct: 86 VEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGDALLAHASRLMSELDTH--- 142 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + A T E G++R+ + + E Y VI+ KTAVL ++A + + +G Sbjct: 143 -TVGHFADTFEELVTGQMRETIGAGEANAVEH-YTAVIREKTAVLIASAGYLGAYHSGAS 200 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR--- 244 AL G +G+ FQ+VDDV+D + E GK G D R G TLPV+ A + Sbjct: 201 AEHAAALHRIGGAIGMIFQIVDDVIDIFSDPKESGKTPGTDLREGVFTLPVLYALEEEGE 260 Query: 245 -GTKREKNFWKSTINDGKISVENLKKAFIIMREN----RALVDTEYRAYSYGQKAKDSLR 299 G K + +D ++ ++A ++ ++ +AL D +Y + ++ L Sbjct: 261 VGDKLRELLTGPLHSDAEV-----ERAIELLHQSGGRQKALEDIN----AYLRTVEEQLA 311 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 LP++S ++L ++ D+ ++R+ Sbjct: 312 VLPENSASQALRQLADYTVRRVG 334 >gi|255530459|ref|YP_003090831.1| trans-hexaprenyltranstransferase [Pedobacter heparinus DSM 2366] gi|255343443|gb|ACU02769.1| Trans-hexaprenyltranstransferase [Pedobacter heparinus DSM 2366] Length = 323 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 150/302 (49%), Gaps = 14/302 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTAT 78 SD ++ + Y++ GK++RPM A + +RG A +E +HTAT Sbjct: 28 SDAPLLDRITHYIVKRKGKQVRPMFVFFAAKLCGGIIESTHRG------AALVELLHTAT 81 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L+HDDVVD++ RRG + +W N+ +VLVGD+LL++ + + L+ +S Sbjct: 82 LVHDDVVDNAYERRGFFSINALWKNKIAVLVGDYLLAKGLLLSVHNSEFRLLQIVSEAVK 141 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 ++EGEL Q+ + +D++EE Y VI+ KTA L ++ + AG + + ++ +G Sbjct: 142 QMSEGELLQIEKVRRMDISEELYFDVIRQKTASLIASCCACGAASAGADEATIEKMRLFG 201 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +GIAFQ+ + +++GK +G D + K TLP+I A R K EK + + Sbjct: 202 EKVGIAFQI--KDDTFDFGTDDVGKPLGIDIKEKKVTLPLIYALNRAEKSEKKRIINLVK 259 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + + +++ + + + + Y Q+A D L + L ++V + Sbjct: 260 NHQDDPVKIQEIIDFVNARQGVHYANEKMIQYQQEAFDILYSFEPGDARTGLEQLVRYTT 319 Query: 319 QR 320 +R Sbjct: 320 ER 321 >gi|46908813|ref|YP_015202.1| polyprenyl synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|226225186|ref|YP_002759293.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes Clip81459] gi|254931090|ref|ZP_05264449.1| polyprenyl synthetase [Listeria monocytogenes HPB2262] gi|46882086|gb|AAT05379.1| polyprenyl synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|225877648|emb|CAS06362.1| Putative heptaprenyl diphosphate synthase component II [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293582635|gb|EFF94667.1| polyprenyl synthetase [Listeria monocytogenes HPB2262] gi|328469814|gb|EGF40731.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes 220] gi|332313071|gb|EGJ26166.1| Polyprenyl synthetase [Listeria monocytogenes str. Scott A] Length = 326 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 154/317 (48%), Gaps = 13/317 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLA 68 KD+++V I K I + + VK LI +GGK LRP L +A +Y + V +A Sbjct: 15 KDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKERAVSIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H ATL+HDDVVDDS LRRG +G +V GD+L C I + Sbjct: 75 AALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHAS 132 Query: 129 ALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++E + + + + GEL Q+ S ++VT +YL I KTA LF AL S G Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLF--ALSCYSGATG 190 Query: 186 VQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + K Y G LG+AFQ++DDVLDY +GK + D + G +LP+I A + Sbjct: 191 SKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 250 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + ++ ++ E ++ ++ + + + A Y KA ++ LP Sbjct: 251 GHLAEFEPLLSQKLD---MTDEASEQVLALISKYKGVEQAFKLANKYTNKALREIKKLPA 307 Query: 304 SSWKKSLMEVVDFCLQR 320 +++ + + L R Sbjct: 308 GAYRDDMYHLTKNILDR 324 >gi|282889795|ref|ZP_06298334.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500369|gb|EFB42649.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 305 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 125/224 (55%), Gaps = 11/224 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D +Y + GGKR+RP+L+LA L + ACA+E IHT +L+HDD+ +D+ Sbjct: 45 DAARYSLLGGGKRIRPLLSLAVTQALTGTFTQAIQPACALELIHTYSLVHDDLPSMDNDD 104 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLVACT-----LA 141 RRGK + V+ ++L GDFLL+ AF C +Q+ +E ++L+A + + Sbjct: 105 FRRGKPSLHKVFPEGHAILTGDFLLTYAFEVLCSSPGLTAQQIVELVALLAKSAGGHGMI 164 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G++ +S + N +T ++ H+ ++KT L + A+E ++++G R L+ +G + Sbjct: 165 AGQIMDIS-AVNQTLTLDNLQHIHQTKTGALITCAVEFGAIVSGCAPVERALLQQFGNEI 223 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 G+AFQ++DDVLD + G ++ D +N K T +L ++ Sbjct: 224 GLAFQIIDDVLDITSSHAKHGDSVASDLKNNKTTYATLLGVEKA 267 >gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307] gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307] Length = 300 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 82/243 (33%), Positives = 137/243 (56%), Gaps = 22/243 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV- 84 E + + ++Y + +GGKRLRP+L LA+ + GD + L A A+E IHT +L+HDD+ Sbjct: 36 ESLREAMRYSLLAGGKRLRPILCLASCEL--AGGDASLALPTATALEMIHTMSLIHDDLP 93 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETKSQEALE-----ALS 134 +D+ LRRG+ V+G+ T++L GD LL++AF MV + ++ L+ +L+ Sbjct: 94 AMDNDDLRRGRPTNHKVYGDATAILAGDALLTRAFEMVALRSPDVPAERLLKVIGELSLA 153 Query: 135 LVACTLAEGELRQLS---LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 A L G++ L+ + +LD E +LH KT L A++ +LIAG +++ Sbjct: 154 AGAPGLVGGQIVDLASEGVEVDLDTLEYIHLH----KTGALLQASVLSGALIAGADDTLL 209 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +AL++Y +G+AFQ++DD+LD +GK G+D K T P +L + R ++ Sbjct: 210 EALRTYSRAIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTYPKLLGLEESKARAES 269 Query: 252 FWK 254 K Sbjct: 270 LVK 272 >gi|47093810|ref|ZP_00231556.1| polyprenyl synthetase [Listeria monocytogenes str. 4b H7858] gi|254824998|ref|ZP_05229999.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-194] gi|254854153|ref|ZP_05243501.1| polyprenyl synthetase [Listeria monocytogenes FSL R2-503] gi|254991862|ref|ZP_05274052.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes FSL J2-064] gi|255519631|ref|ZP_05386868.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes FSL J1-175] gi|300763608|ref|ZP_07073606.1| polyprenyl synthetase [Listeria monocytogenes FSL N1-017] gi|47017807|gb|EAL08594.1| polyprenyl synthetase [Listeria monocytogenes str. 4b H7858] gi|258607545|gb|EEW20153.1| polyprenyl synthetase [Listeria monocytogenes FSL R2-503] gi|293594238|gb|EFG01999.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-194] gi|300515885|gb|EFK42934.1| polyprenyl synthetase [Listeria monocytogenes FSL N1-017] Length = 326 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 88/240 (36%), Positives = 126/240 (52%), Gaps = 10/240 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLA 68 KD+++V I K I + + VK LI +GGK LRP L +A +Y + V +A Sbjct: 15 KDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKERAVSIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H ATL+HDDVVDDS LRRG +G +V GD+L C I + Sbjct: 75 AALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHAS 132 Query: 129 ALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++E + + + + GEL Q+ S ++VT +YL I KTA LF AL S G Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRISGKTAQLF--ALSCYSGATG 190 Query: 186 VQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + K Y G LG+AFQ++DDVLDY +GK + D + G +LP+I A + Sbjct: 191 SKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 250 >gi|116491107|ref|YP_810651.1| geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1] gi|290890612|ref|ZP_06553683.1| hypothetical protein AWRIB429_1073 [Oenococcus oeni AWRIB429] gi|116091832|gb|ABJ56986.1| Geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1] gi|290479740|gb|EFD88393.1| hypothetical protein AWRIB429_1073 [Oenococcus oeni AWRIB429] Length = 325 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 89/304 (29%), Positives = 157/304 (51%), Gaps = 4/304 (1%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L+ K I +D E + + +I SGGK LRP L ++ + + + LA AIE +H A Sbjct: 23 LMQKNIKTDNEPVSKAILEMINSGGKLLRPAYLLLFSMFQKTDRNKIIALAAAIEILHMA 82 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV 136 TL+HDDV+D+S RRG + + +G T+V GD+L F ++ E S ++ Sbjct: 83 TLIHDDVIDESPTRRGMSSIQKQFGQSTAVYSGDYLFVVCFNLLAEYASDFRGIQQYGHH 142 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + GE+ Q+ +L+++ + Y I KT LFS A + + +G + + + Sbjct: 143 MNAILNGEMTQMVERYDLNISIDQYFKQISGKTGQLFSLATFLGAYESGNKIKFAKNAEK 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 G+N+G++FQL+DD+LDY ++GK + D R G + P+ILA + + F+ Sbjct: 203 IGLNIGVSFQLMDDILDYTDNSQQIGKPVHNDMREGVYSAPLILAM---AQHKDLFFPFL 259 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 K++ ++ ++ ++ E + + A +Y +KA + LPD KK+L+++ Sbjct: 260 KKKNKMTDQDTEEIAKLVIEFDGIKKAKKYAETYTKKALIQINDLPDKPAKKALIDITRE 319 Query: 317 CLQR 320 L R Sbjct: 320 LLDR 323 >gi|302308079|ref|NP_984864.2| AER004Wp [Ashbya gossypii ATCC 10895] gi|299789285|gb|AAS52688.2| AER004Wp [Ashbya gossypii ATCC 10895] Length = 475 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 100/338 (29%), Positives = 147/338 (43%), Gaps = 67/338 (19%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRR 92 I G K L P+ L E+ + +L LA +E IHTA+LLHDDV+D S RR Sbjct: 148 ILHGIKPLNPLTKGPEPLPQEFDRERGILPKQRRLAEIVEMIHTASLLHDDVIDHSGTRR 207 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL---- 148 GK + + + N+ +VL GDFLL +A + ++ E +E +S L EGE QL Sbjct: 208 GKPSGNVAFTNKMAVLAGDFLLGRATVSISRLRNPEVVELVSNCIANLVEGEFMQLKNTV 267 Query: 149 ----------------SLSKNLDVTEED-----------------------YLHVIKSKT 169 SK + + D YLH KT Sbjct: 268 VDGDLETINNGTQQIPPASKTIPLPVHDYRVNTTLASGISHEVMIETAFDYYLHKTYLKT 327 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 A L S + +++++G ++ + +G NLGI FQLVDD+LD+ E+GK +G DF Sbjct: 328 AALISKSCRAAAVLSGARDPILDECYHFGKNLGICFQLVDDMLDFTTS-GELGKPVGADF 386 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR------ENRALVDT 283 G T PV+ A WK + G I N + + R ++ + T Sbjct: 387 ELGIATAPVLFA-----------WKEDPSLGPIIQRNFSQPGDVARALEAVHQHDGIKKT 435 Query: 284 EYRAYSYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQR 320 A Y KA +LR LP+S + +L + + L R Sbjct: 436 AEVAREYRDKALHNLRAALPESDSRAALEFLTNSILTR 473 >gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544] gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544] Length = 298 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 131/251 (52%), Gaps = 20/251 (7%) Query: 18 LILKRICSDVEMIP-------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 L+ K++ ++E P + ++Y + +GGKRLRP+L +A A + +G +++ ACA Sbjct: 18 LVEKQLVKELEKEPPLDARLAESMRYSLMAGGKRLRPILLMAAADAVGAKGTDYLTTACA 77 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E IHT +L+HDD+ +D+ RRGK+ V+G+ +VL GD LL+ AF ++ + + Sbjct: 78 LEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGMAVLAGDALLTLAFEVIGRQQHTD 137 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDY---------LHVIKSKTAVLFSAALEV 179 L V + + + +D+ E + +H+ KT LF AAL Sbjct: 138 PATLLRTVQEISTAAGMNGMVGGQAIDLESEGHRISMEQLRKMHM--GKTGALFRAALRS 195 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++AG AL +Y G+AFQ+ DD+LD G+ +GK +G D RN K T + Sbjct: 196 GAILAGASEKQLAALTAYAEGFGLAFQITDDILDVTGDEALIGKPVGSDLRNEKSTYVTL 255 Query: 240 LAFQRGTKREK 250 + + + K Sbjct: 256 TSLEEAQRLAK 266 >gi|255324689|ref|ZP_05365803.1| bifunctional short chain isoprenyl diphosphate synthase [Corynebacterium tuberculostearicum SK141] gi|255298164|gb|EET77467.1| bifunctional short chain isoprenyl diphosphate synthase [Corynebacterium tuberculostearicum SK141] Length = 334 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 159/323 (49%), Gaps = 26/323 (8%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACA 70 ME V + I + + D V +L +GGKR RPM+ L + G V+ A Sbjct: 26 MEAVEDKLRSEIDRGQDFLKDKVSHLSKAGGKRFRPMMALLASEYGPRPGCKEVVKAATV 85 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A ++ E + Sbjct: 86 VEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGDALLAHASRLMSELDTH--- 142 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + A T E G++R+ + + E Y VI+ KTAVL ++A + + +G Sbjct: 143 -TVGHFADTFEELVTGQMRETIGAGEANAVEH-YTAVIREKTAVLIASAGYLGAYHSGAS 200 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR--- 244 AL G +G+ FQ+VDDV+D + E GK G D R G TLPV+ A + Sbjct: 201 AEHAAALHRIGGAIGMIFQIVDDVIDIFSDPKESGKTPGTDLREGVFTLPVLYALEEEGE 260 Query: 245 -GTKREKNFWKSTINDGKISVENLKKAFIIMREN----RALVDTEYRAYSYGQKAKDSLR 299 G K + +D ++ ++A ++ ++ +AL D +Y + ++ L Sbjct: 261 VGDKLRELLTGPLHSDAEV-----ERAIELLHQSGGRQKALEDIN----AYLRTVEEQLA 311 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 LP++S ++L ++ D+ ++R+ Sbjct: 312 VLPENSASQALRQLADYTVRRVG 334 >gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328] gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328] Length = 316 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/236 (32%), Positives = 124/236 (52%), Gaps = 11/236 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L LAT +L + + ACA+E IHT +L+HDD+ + Sbjct: 51 EKIYESMRYSLMAGGKRLRPILCLATCELLGGTVEMAMPTACALEMIHTMSLIHDDLPAM 110 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLV-------- 136 D+ RRGK+ V+G ++L GD LLS AF V +T+ L ++ Sbjct: 111 DNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVG 170 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 A L G++ L+ D++EE + KT L A + +++AG + + L Sbjct: 171 ATGLVGGQVVDLASEGLSDISEETLTFIHTHKTGALLEACVVCGAILAGANETDLERLSR 230 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 Y N+G+AFQ+VDD+LD +E+GK G+D K T P + ++ + + Sbjct: 231 YAKNIGLAFQIVDDILDITVPSSELGKTAGKDLEAQKATYPSLWGLEKSRAKAQQL 286 >gi|114629763|ref|XP_507706.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Pan troglodytes] Length = 415 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 79/245 (32%), Positives = 123/245 (50%), Gaps = 7/245 (2%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L +D++ + I K + + ++ +Y GK RP++ +A A + + H Sbjct: 98 LGWRDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRH 157 Query: 65 V-----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 158 VQASQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 217 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 218 ALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 277 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 278 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVL 337 Query: 240 LAFQR 244 A Q+ Sbjct: 338 FACQQ 342 >gi|241895189|ref|ZP_04782485.1| possible trans-hexaprenyltranstransferase [Weissella paramesenteroides ATCC 33313] gi|241871495|gb|EER75246.1| possible trans-hexaprenyltranstransferase [Weissella paramesenteroides ATCC 33313] Length = 342 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 86/316 (27%), Positives = 151/316 (47%), Gaps = 9/316 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++++ V F+I + ++ + + + + +GGK LRP + N +A Sbjct: 33 QELQDVLFIIQNSLQANDKEVEQALLDMFRAGGKMLRPAFAIIIGQFYPGNTSNLKHIAA 92 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQE 128 A+E +HTATL+HDD++DDS RR + + +G + GD+L + F + T Sbjct: 93 AVEMLHTATLIHDDIIDDSPERRHAPSIQSKFGKDIAAYAGDYLFAATFKTLAYHTDDMT 152 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + + + GEL Q + + +T DY I KTA LF + ++ + + Sbjct: 153 LVRQATKLLEDILTGELTQRTNHYDRHMTLADYKEQIAGKTAALFVLSAQLGAANGDAPD 212 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + + N+G+AFQ++DD+LDY+ ++GK +D R G + P+I+A Q + Sbjct: 213 EFVDLVTEFAFNVGMAFQILDDILDYQSTKTDLGKPTLQDVREGVYSAPLIIAMQDKAEI 272 Query: 249 EKNFWKS--TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + K ND I + +L A + E +L A Y +KA D L LPD Sbjct: 273 QNLLAKKDRISNDESIQLRDLVIASGAVDEATSL------ASEYTEKALDYLAQLPDGEA 326 Query: 307 KKSLMEVVDFCLQRLN 322 K +L+ + + L+R N Sbjct: 327 KDTLITISEALLERAN 342 >gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 294 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 81/233 (34%), Positives = 129/233 (55%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 ++I + +KY +F+GGKRLRP+L L++ + E + +ACAIE IHT +L+HDD+ + Sbjct: 28 QIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDIKKALPVACAIELIHTYSLIHDDLPAM 87 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK------SQEALEALSLVA-- 137 D+ LRRGK V+G ++L GD LL+ AF ++I Q L+A +A Sbjct: 88 DNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFEVLIRHALENPHDYQRILKATDEIARA 147 Query: 138 --CT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 C + G++ + LS+N +T E+ + + KT L A++ + IAG AL Sbjct: 148 SGCKGMIGGQVVDI-LSQNTKLTYEELKFMHEHKTGALIEASVCAGAYIAGAIEEDIHAL 206 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + Y +G+AFQ+ DD+LD GE ++GK +G D GK T I ++ + Sbjct: 207 REYASLIGLAFQIKDDILDVIGEEEKLGKKVGSDREKGKVTFVNIFGLKKSQQ 259 >gi|315654711|ref|ZP_07907617.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 51333] gi|315491175|gb|EFU80794.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 51333] Length = 350 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 88/326 (26%), Positives = 164/326 (50%), Gaps = 19/326 (5%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL- 67 L D+E+ ++++ + E +V +L +GGKR+RP+LTL L+ + + + Sbjct: 32 LDDIEQ---MLVQETQTQREKTSALVSHLRAAGGKRMRPLLTL---LVSQLGAPDQPVSS 85 Query: 68 -----ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 A A+E H A+L HDD++D++ +RRG AA + W N +V+ GD + S+A +++ Sbjct: 86 QVKQGAVAVELTHLASLYHDDLMDEATMRRGVPAAHVQWNNTLAVMAGDLIFSRA-SLLV 144 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + + S L +G++R + + D E Y+ V++ KT L A + Sbjct: 145 SGLNPTIVAQHSRTFERLCQGQMRDIFGPDSHDDPIEFYIDVLRDKTGALIGCAALYGAE 204 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++G + A+ +G +LG+AFQ+ DDVLD + + GK G D R+G T PV+L Sbjct: 205 LSGCDAATVSAVTQFGEDLGVAFQIADDVLDLQATEAQSGKTPGADLRDGTKTFPVLLLE 264 Query: 243 Q-----RGTKREKNFWKSTINDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 + R T ++ ++ + + + L + + + +T+ A + ++A Sbjct: 265 KTVQDGRDTAPDRALLQAIADTDALQDDAVLAQVTAQLAAHPVTEETKRLAGEWVERALA 324 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 L+ +PDS K++L+E + RL Sbjct: 325 HLQHIPDSEVKRALIEFAHLQINRLQ 350 >gi|118576854|ref|YP_876597.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase [Cenarchaeum symbiosum A] gi|118195375|gb|ABK78293.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase [Cenarchaeum symbiosum A] Length = 272 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 107/184 (58%), Gaps = 1/184 (0%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y I +GGKR+RP++ + A + DN ACA+E +HT +++HDD++DD +RR Sbjct: 31 LRYAI-TGGKRIRPIILVLAAESVGSADDNTYAAACAVELLHTESVIHDDIIDDETMRRH 89 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 K + +G TS+L GDF+L + + + LS A ++EGE + L + Sbjct: 90 KDPFHIKYGQNTSILTGDFVLGLILKICSRLDNVRIADDLSTTAMMMSEGEAIEGRLENS 149 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 DVT +DYL VI+ KTA F A ++ +++ G + L +G N+GIA+Q+ DD+ D Sbjct: 150 GDVTFDDYLKVIEYKTATAFEVASKIGAILGGGSERQVEDLTGFGKNIGIAYQIKDDLND 209 Query: 214 YRGE 217 ++ E Sbjct: 210 WKNE 213 >gi|149193697|ref|ZP_01870795.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2] gi|149135650|gb|EDM24128.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2] Length = 287 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 68/184 (36%), Positives = 111/184 (60%), Gaps = 4/184 (2%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IH A+LLHDDV+D++ RRG + +G+ T+V++GD + S F +++ Sbjct: 41 LAAIVEGIHLASLLHDDVIDEADTRRGVKSINAKYGDFTAVMLGDIIYSTCFYDLVDF-D 99 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E + +S L+EGEL + LSKN+++ ++ Y+ +I KTA L A+ + S+ ++ Sbjct: 100 KEVAKIISNAVRLLSEGELEDVKLSKNINLDKDKYMQMIYKKTASLIEASCKASAFLS-- 157 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N + +YG N+GIAFQ++DD+LD + +GK DF GK TLP I F++ Sbjct: 158 -NYDVEKFGTYGRNIGIAFQIIDDLLDIIQDSKTIGKPSMHDFYEGKTTLPFIYLFEKVN 216 Query: 247 KREK 250 +EK Sbjct: 217 DKEK 220 >gi|325103979|ref|YP_004273633.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145] gi|324972827|gb|ADY51811.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145] Length = 324 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 79/236 (33%), Positives = 129/236 (54%), Gaps = 3/236 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V YL+ GGKRLRP L L + + V A AIEF H +L+HDD++D + LRRG Sbjct: 31 VSYLLGLGGKRLRPALLLLATDLFGGDVEKAVKPAMAIEFFHNFSLMHDDIMDKAPLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLVACTLAEGELRQLSL 150 K W + T++L GD +L +A+ C V K L+ + ++ + EG+ ++ Sbjct: 91 KPTVHEKWSDSTAILSGDIMLIEAYKLICEVEAVKLPACLKIFNTISTEVCEGQQMDMNF 150 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 K V+ E+Y+ +I+ KTAVL AL++ ++IA + ++ + +G LG+AFQL DD Sbjct: 151 EKEEFVSIEEYIEMIRLKTAVLLGGALKIGAVIADASENDQELINDFGTKLGVAFQLQDD 210 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 +LD G+ + GK +G D + K T +I A + K + +N+ I+ ++ Sbjct: 211 ILDVYGDPEKFGKQVGGDIISNKKTFLLIKALELAKDDLKKELEDLLNNQIITADD 266 >gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] Length = 294 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 21/238 (8%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 +I ++Y + GGKRLRP L +A A + + + ACA+E IHT +L+HDD+ +D Sbjct: 32 LIHHAMRYSVLGGGKRLRPALVMAGAEAVGGNAADVLPAACAVELIHTYSLVHDDLPAMD 91 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-------------KSQEALEAL 133 + RRG++ V+G ++L GD LL+ AF ++ ++ A + Sbjct: 92 NDDYRRGRLTNHKVYGEAAAILAGDALLTLAFELLANNDRARPENIVRVIREAAAAAGTM 151 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 L+ + + S K +D + +Y+H + KT L+ ++ +++AG Q + Sbjct: 152 GLIGGQVVD----TFSAGKEIDESTLEYIH--RHKTGALYRFSVRAGAMLAGAQEEQLAS 205 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L +Y +LG+AFQ+ DD+LD G+ ++GK +G D RN K T P + + K+ + Sbjct: 206 LTAYAEHLGLAFQIKDDILDVEGDEKKIGKPVGSDVRNRKSTYPSLFGMEYSRKKARQ 263 >gi|16801851|ref|NP_472119.1| hypothetical protein lin2790 [Listeria innocua Clip11262] gi|16415326|emb|CAC98016.1| lin2790 [Listeria innocua Clip11262] Length = 326 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 89/244 (36%), Positives = 129/244 (52%), Gaps = 18/244 (7%) Query: 10 KDMEKVNFLILKRICSDVEM----IPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNH 64 KD+++V L+ I S++++ + VK LI +GGK LRP L +A E+ + Sbjct: 15 KDLQEV----LQTIESNIQIRDKHVEKNVKDLIHAGGKLLRPAFALLSAQAGPEFDKERA 70 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 V +A A+E +H ATL+HDDVVDDS LRRG +G +V GD+L C I + Sbjct: 71 VSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLF--CICFKILS 128 Query: 125 KSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++E + + + + GEL Q+ S +DVT +YL I KTA LF AL S Sbjct: 129 AHASSVENIEFNSKNIEKILMGELDQMRTSYKMDVTVREYLSRISGKTAQLF--ALSCYS 186 Query: 182 LIAGVQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 G + K Y G LG+AFQ++DDVLDY +GK + D + G +LP+I Sbjct: 187 GATGSKAPRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLI 246 Query: 240 LAFQ 243 A + Sbjct: 247 YAMK 250 >gi|50659086|ref|NP_055132.2| decaprenyl-diphosphate synthase subunit 1 [Homo sapiens] gi|74744657|sp|Q5T2R2|DPS1_HUMAN RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName: Full=All-trans-decaprenyl-diphosphate synthase subunit 1; AltName: Full=Decaprenyl pyrophosphate synthase subunit 1; AltName: Full=Trans-prenyltransferase 1; Short=TPT 1 gi|55959523|emb|CAI17280.1| trans-prenyltransferase (TPT) [Homo sapiens] gi|81157931|dbj|BAE48216.1| subunit 1 of decaprenyl diphosphate synthase [Homo sapiens] gi|119606490|gb|EAW86084.1| prenyl (decaprenyl) diphosphate synthase, subunit 1, isoform CRA_a [Homo sapiens] Length = 415 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 79/245 (32%), Positives = 123/245 (50%), Gaps = 7/245 (2%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L +D++ + I K + + ++ +Y GK RP++ +A A + + H Sbjct: 98 LGWRDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRH 157 Query: 65 V-----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 158 VQASQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 217 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 218 ALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 277 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 278 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVL 337 Query: 240 LAFQR 244 A Q+ Sbjct: 338 FACQQ 342 >gi|110668786|ref|YP_658597.1| trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase) [Haloquadratum walsbyi DSM 16790] gi|109626533|emb|CAJ52996.1| probable trifunctional short-chain (E)-prenyl diphosphate synthase (probable dimethylallyltransferase / probable geranyltranstransferase / probable farnesytranstransferase) [Haloquadratum walsbyi DSM 16790] Length = 348 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 160/314 (50%), Gaps = 23/314 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA--------LMLEYR------GDNHVLLACA--I 71 E + + +YL+ +GGKRLRP + L TA L +YR G +++ A I Sbjct: 35 ERLYEATRYLLEAGGKRLRPTVALLTAESLADVDPLTADYRSFPALDGSEVDVMSAATSI 94 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-- 129 E I + TL+HDD++DD LRRG A + +T++L GD L ++AF ++ T + A Sbjct: 95 EVIQSFTLIHDDIMDDDDLRRGVPAVHREYDTETAILAGDTLYAKAFELLSNTGADPANG 154 Query: 130 LEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + A+S +A T + EG+ + V E+YL +++ KTAVL+ AA ++L+ Sbjct: 155 VAAVSRLATTCTQICEGQALDVEFEHRDAVLPEEYLEMVELKTAVLYGAATSTTALLLDA 214 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 V AL YG++ G AFQ+ DDVLD ++GK G D K TL + A Q+G Sbjct: 215 DADVVDALYQYGIDAGRAFQIQDDVLDLTVPSEQLGKQRGSDLIENKETLITLHARQQGI 274 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E + I+ +S ++ A + E ++ A ++AK+ L LPD+ Sbjct: 275 DVESLLESTDID--AVSEAAVENAVATLDEAGSIEYASNTATDLVERAKNHLEVLPDNDA 332 Query: 307 KKSLMEVVDFCLQR 320 + L ++ D+ + R Sbjct: 333 RSLLCDIADYLITR 346 >gi|29165656|gb|AAH49211.1| PDSS1 protein [Homo sapiens] Length = 414 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 79/245 (32%), Positives = 123/245 (50%), Gaps = 7/245 (2%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L +D++ + I K + + ++ +Y GK RP++ +A A + + H Sbjct: 97 LGWRDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRH 156 Query: 65 V-----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 157 VQASQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 216 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 217 ALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 276 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 277 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVL 336 Query: 240 LAFQR 244 A Q+ Sbjct: 337 FACQQ 341 >gi|109088459|ref|XP_001102166.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1 isoform 1 [Macaca mulatta] Length = 415 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 79/245 (32%), Positives = 123/245 (50%), Gaps = 7/245 (2%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L +D++ + I K + + ++ +Y GK RP++ +A A + + H Sbjct: 98 LGWRDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRH 157 Query: 65 V-----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 158 VQASQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 217 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 218 ALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 277 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 278 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVL 337 Query: 240 LAFQR 244 A Q+ Sbjct: 338 FACQQ 342 >gi|288926232|ref|ZP_06420158.1| polyprenyl synthetase [Prevotella buccae D17] gi|288337011|gb|EFC75371.1| polyprenyl synthetase [Prevotella buccae D17] Length = 323 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 117/219 (53%), Gaps = 2/219 (0%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +KY++ GGKR+RP L L + + + + ACA+E H TLLHDD++D++ +RRG Sbjct: 31 IKYVLSMGGKRIRPTLMLLAYNLFKDDPEKILSSACALETYHNYTLLHDDLMDNADVRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--EALEALSLVACTLAEGELRQLSLS 151 + W +VL GD +L A+ + E S E L + A + EG+ + Sbjct: 91 QPTVHKKWNANLAVLSGDSMLVLAYQRMTECDSHLAEVLRLFTETALEIGEGQQMDMEFE 150 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 DV EE+Y+ +I+ KT+VL + A+++ +L+A L +G +G+AFQL DD Sbjct: 151 TRNDVREEEYIEMIRLKTSVLLACAMKIGALLADAPADDADNLYRFGEKIGLAFQLQDDY 210 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LD G+ GK IG D + K T +I AF R ++ Sbjct: 211 LDVYGDPAVFGKAIGGDIVSNKKTYMLINAFNRADNAQR 249 >gi|282850211|ref|ZP_06259590.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745] gi|282579704|gb|EFB85108.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745] Length = 292 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 120/239 (50%), Gaps = 9/239 (3%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L + E + + + Y + GGKR+RP+LT A ML ++ CA+E IHT + Sbjct: 20 VLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYS 79 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +D+ RRG + V+G ++L GD LL+ AF ++ A + L + Sbjct: 80 LVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTSNTVASAQQKLDAI 139 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDY------LHVIKS-KTAVLFSAALEVSSLIAGVQNS 189 C + + D+ ED L V+ S KT LF+A++E+ ++ N+ Sbjct: 140 QCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHSGKTGALFNASVELGLILGCANNT 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 R AL Y LG+ FQ+ DD+LD G + E+GK G D R K T +L ++ + Sbjct: 200 TRTALMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHKSTYVSLLGLEQAKHQ 258 >gi|194333227|ref|YP_002015087.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271] gi|194311045|gb|ACF45440.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271] Length = 337 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 84/271 (30%), Positives = 134/271 (49%), Gaps = 11/271 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S E + +Y++ GKR+RP LTL A + D+ + A +E +H TL+HDD+ Sbjct: 37 STPETLYAPARYILEGKGKRIRPFLTLLAAESVCNSSDDALNAALGVEILHNFTLMHDDI 96 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLA 141 +D + LR G+ L W ++L GD +++ A+ + TK+ E + L+ T+ Sbjct: 97 MDQADLRHGRPTVHLKWDENAAILSGDMMIAFAYECALNTKTDRHAELVHILNDANITIC 156 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 EG+ + L + + T DYL +I KT L SAALE ++ QAL ++G + Sbjct: 157 EGQALDMELEQRAEATIADYLDMISKKTGRLISAALEAGGVVGNADALQLQALVTFGEKI 216 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G AFQ+ DD LD + + GK G D NGK T ++ + + E+ +S I + Sbjct: 217 GRAFQVQDDYLDIMADDGKSGKIPGGDVINGKKTYLLLRSIELTEGNERKLLQSIIANKG 276 Query: 262 ISVENLKKAFII------MRENRALV--DTE 284 I E + + I + E R L+ DTE Sbjct: 277 IEPERVPEIRAIFEQCGVLEEARQLINRDTE 307 >gi|111018984|ref|YP_701956.1| polyprenyl synthetase [Rhodococcus jostii RHA1] gi|110818514|gb|ABG93798.1| polyprenyl synthetase [Rhodococcus jostii RHA1] Length = 346 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 88/316 (27%), Positives = 161/316 (50%), Gaps = 11/316 (3%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +++V L++ + + + + +L +GGKR RP+ T+ TA + D V+ A + Sbjct: 37 LKQVEELLVSELSDGEDFLTEAALHLAKAGGKRFRPLFTVLTAQLGPKASDPSVVTAATV 96 Query: 72 -EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 E +H ATL HDDV+D++++RRG +A WGN ++L GD+L + A +V S Sbjct: 97 VELVHLATLYHDDVMDEASMRRGAPSANSRWGNSVAILAGDYLFAHASRLV----STLGP 152 Query: 131 EALSLVACTLAE---GELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 EA+ ++A T AE G++R+ + L D E YL V+ KT L +A +G Sbjct: 153 EAVRIIAETFAELVTGQMRETIGLRGEQDPVEH-YLKVVWEKTGSLIAACGRFGGTFSGA 211 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + L+ G +G AFQ+ DD++D + GK G D R G TLPV+ A R Sbjct: 212 DADHVKRLERLGDAVGTAFQISDDIIDISSVSAQSGKTPGTDLREGVHTLPVLYAL-RDE 270 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + + ++ + +++ +A ++ + + + + + +A+ L LP Sbjct: 271 GPDADRLRVLLDGPVTNDDDVAEALALLERSPGMAAAKAKLEEFAVQARAQLAELPQGPA 330 Query: 307 KKSLMEVVDFCLQRLN 322 +L+++VD+ ++R+ Sbjct: 331 NDALVKLVDYTIERVG 346 >gi|315606371|ref|ZP_07881386.1| geranyltranstransferase [Prevotella buccae ATCC 33574] gi|315251777|gb|EFU31751.1| geranyltranstransferase [Prevotella buccae ATCC 33574] Length = 323 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 117/219 (53%), Gaps = 2/219 (0%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +KY++ GGKR+RP L L + + + + ACA+E H TLLHDD++D++ +RRG Sbjct: 31 IKYVLSMGGKRIRPTLMLLAYNLFKDDPEKILSSACALETYHNYTLLHDDLMDNADVRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--EALEALSLVACTLAEGELRQLSLS 151 + W +VL GD +L A+ + E S E L + A + EG+ + Sbjct: 91 QPTVHKKWNANLAVLSGDSMLVLAYQRMTECDSHLAEVLRLFTETALEIGEGQQMDMEFE 150 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 DV EE+Y+ +I+ KT+VL + A+++ +L+A L +G +G+AFQL DD Sbjct: 151 TRNDVREEEYIEMIRLKTSVLLACAMKIGALLADAPADDADNLYRFGEKIGLAFQLQDDY 210 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LD G+ GK IG D + K T +I AF R ++ Sbjct: 211 LDVYGDPAVFGKAIGGDIVSNKKTYMLINAFNRADNAQR 249 >gi|4732024|gb|AAD28559.1|AF118395_1 trans-prenyltransferase [Homo sapiens] Length = 376 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 87/296 (29%), Positives = 142/296 (47%), Gaps = 12/296 (4%) Query: 32 DVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNHV-----LLACAIEFIHTATLLHDDV 84 ++ +Y GK RP++ +A A + + HV +A E IHTA+L+HDDV Sbjct: 84 EISEYYFDVKGKAFRPIIVVLMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV 143 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +DD++ RRGK +WG + +VL GD +LS A + + + L+ V L GE Sbjct: 144 IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGE 203 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 QL +N + YL KTA L + + + S++ V + YG N+GIA Sbjct: 204 FLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 263 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQL+DDVLD+ ++MGK D + G T PV+ A Q+ + + G Sbjct: 264 FQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPG---- 319 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ +A + ++ + T Y A Y +A + L S + +L+++ + L R Sbjct: 320 -DVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPERDALIQLSEIVLTR 374 >gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101] Length = 310 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 79/233 (33%), Positives = 127/233 (54%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + +GGKRLRP+L LA + + A A+E IHT +L+HDD+ + Sbjct: 44 ESLRESMRYSLLAGGKRLRPILCLAACELAGGDSAQAMPTAVALEMIHTMSLIHDDLPAM 103 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLV-------- 136 D+ LRRG V+G ++L GD LL++AF MV + + A + L +V Sbjct: 104 DNDDLRRGMPTNHKVYGEANAILAGDALLTRAFEMVALRSPGVPAEQLLKVVGELSLASG 163 Query: 137 ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L KN+D+ +Y+H+ KT L A + +LIAG +++ +AL+ Sbjct: 164 APGLVGGQVVDLECEGKNVDLETLEYIHL--HKTGALLRACVLTGALIAGAPDALLEALR 221 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +Y +G+AFQ++DD+LD +GK G+D K T P +L + KR Sbjct: 222 TYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTYPKLLGLEESRKR 274 >gi|332240581|ref|XP_003269466.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Nomascus leucogenys] Length = 397 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 91/321 (28%), Positives = 151/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L +D++ + I K + + ++ +Y GK RP++ +A A + + H Sbjct: 80 LGWRDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRH 139 Query: 65 V-----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 140 VQASQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 199 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N YL KTA L + + + Sbjct: 200 ALARIGNTTVISILTQVIEDLVRGEFLQLGSKENESERFAHYLEKTFKKTASLIANSCKA 259 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 260 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVL 319 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G ++ +A + ++ + T Y A Y +A + Sbjct: 320 FACQQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHEAIREIS 374 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S + +L+++ + L R Sbjct: 375 KLRPSPERDALIQLSEIVLTR 395 >gi|296111457|ref|YP_003621839.1| heptaprenyl diphosphate synthase, component II, putative [Leuconostoc kimchii IMSNU 11154] gi|295832989|gb|ADG40870.1| heptaprenyl diphosphate synthase, component II, putative [Leuconostoc kimchii IMSNU 11154] Length = 332 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 92/288 (31%), Positives = 140/288 (48%), Gaps = 9/288 (3%) Query: 39 FSGGKRLRPMLTLA-TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 + GK +RP LTL + L E + + L ++E +H ATL+HDD++D+S LRRG + Sbjct: 46 LNAGKLVRPALTLIFSRLTSESYNQSAISLGASVELLHLATLIHDDIIDESKLRRGHESI 105 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-LAEGELRQLSLSKNLDV 156 + +G T+V GD+LL+ F + +E + A L+L A + GEL Q N+D Sbjct: 106 QSQFGKDTAVYAGDYLLTGMFSL-LERADKPAANKLALTALQEILFGELLQKQNRYNIDT 164 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDY 214 T Y IK KTA LF + L++G S + + G N+GI FQL+DD LD+ Sbjct: 165 TFSAYFSQIKGKTAALFKLSATF-GLVSGTDYSDELFSTVSHLGENIGITFQLLDDYLDF 223 Query: 215 RG--EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 E +GK IG+D RNG T P++ A T + IS E L Sbjct: 224 ESTKESLALGKPIGQDIRNGIYTAPILFALD-DTSVNTEIKTLLLKRDAISNEELTILHN 282 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ + A+ + Y KD + LP++ ++ L + L R Sbjct: 283 LITSSNAITKLKALLTEYSDSLKDLITSLPNTQIQEQLEHLSQLLLTR 330 >gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis NIES-39] Length = 316 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 121/228 (53%), Gaps = 11/228 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP L LAT +L + + ACA+E IHT +L+HDD+ + Sbjct: 51 EKIYESMRYSLMAGGKRLRPTLCLATCELLGGTVEMAMPTACALEMIHTMSLIHDDLPAM 110 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLV-------- 136 D+ RRGK+ V+G+ ++L GD LLS AF V +T+ L ++ Sbjct: 111 DNDDYRRGKLTNHKVYGDDIAILAGDGLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVG 170 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 A L G++ ++ DV+EE + KT L A + +++AG + + L Sbjct: 171 ATGLVGGQVVDIASEGLSDVSEETLTFIHTHKTGALLEACVVCGAILAGANETDLERLSR 230 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y N+G+AFQ+VDD+LD ++GK G+D K T P + ++ Sbjct: 231 YAKNIGLAFQIVDDILDITAPSEQLGKTAGKDLEAQKATYPSLWGLEK 278 >gi|163849265|ref|YP_001637309.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl] gi|222527256|ref|YP_002571727.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl] gi|163670554|gb|ABY36920.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl] gi|222451135|gb|ACM55401.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl] Length = 361 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 159/313 (50%), Gaps = 5/313 (1%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L D+ + +L+ S V +I + + SGGKRLR L + A + Y+ + + A Sbjct: 51 LADLGAIEQRLLECTQSRVAVISAAGMHTVRSGGKRLRAALAVLAARLGHYQLERVIHPA 110 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A E IH A+L+HDD+VD + RRG++ W N +++VGD+ + A + + Sbjct: 111 AAAELIHAASLVHDDLVDQANRRRGQITVHARWDNDVALMVGDYFFALAAAEMARSPDPR 170 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + T+ EGEL +++++ D YL+ +KTAVLF AA + + G + Sbjct: 171 IITFYAEAVQTICEGELSPVTVAEPFDKALRQYLYKTGAKTAVLFEAACKAGMVAGGGSD 230 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 AL SYG +LG+AFQ++DDVLD+ G+ +GK G D R G TLP+I A + Sbjct: 231 EEIAALGSYGYDLGMAFQIIDDVLDFIGDERTLGKPAGNDLRQGTITLPLIYATAASPSQ 290 Query: 249 E-KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ T + E +++ +I A TE A Y +A L P S + Sbjct: 291 VLRDVLLHTPPSDTLVAEVIRE--VINAGGVAAAQTE--AARYIDQAVSHLERFPSSPAR 346 Query: 308 KSLMEVVDFCLQR 320 ++L+++ F L+R Sbjct: 347 QALIDIAHFVLER 359 >gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 300 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 126/233 (54%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ + ++Y + +GGKR+RP+L LA+ + V A AIE IHT +L+HDD+ + Sbjct: 36 EILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSLVAC 138 D+ RRG+ V+G+ ++L GD LL++AF MV + + LSLVA Sbjct: 96 DNDGFRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDSNRLLNVVGELSLVAG 155 Query: 139 T--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L K +D+ +Y+H+ KT L A++ ++IAG + AL Sbjct: 156 APGLVGGQVVDLECEGKEVDLETLEYIHL--HKTGALLKASVRTGAMIAGANEELLNALT 213 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +Y +G+AFQ++DD+LD ++GK G+D K T P +L + K+ Sbjct: 214 TYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLGMEESKKK 266 >gi|168203177|gb|ACA21459.1| geranyl diphosphate synthase 3 [Picea abies] Length = 427 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 85/240 (35%), Positives = 123/240 (51%), Gaps = 19/240 (7%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRPM--LTLATALML---EYRGD------------N 63 I +++ + +Y G GKR RPM L +A++L + E D Sbjct: 108 ILTEIPKLGTAAEYFFKLGVEGKRFRPMVLLLMASSLTIGIPEVAADCLRKGLDEEQRLR 167 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A E IH A+LLHDDV+DD+ RRG + V GN+ +VL GDFLLS+A + Sbjct: 168 QQRIAEITEMIHVASLLHDDVLDDADTRRGVGSLNFVMGNKLAVLAGDFLLSRASVALAS 227 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ E +E LS V L GE+ Q++ + + E Y+ KTA L + + + +LI Sbjct: 228 LKNTEVVELLSKVLEHLVTGEIMQMTNTNEQRCSMEYYMQKTFYKTASLMANSCKAIALI 287 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG V YG NLG+A+QL+DDVLD+ G +GK D R G T P++ A + Sbjct: 288 AGQPAEVCMLAYDYGRNLGLAYQLLDDVLDFTGTTASLGKGSLSDIRQGIVTAPILFALE 347 >gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311] gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311] Length = 312 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 27/259 (10%) Query: 15 VNFLILKR----ICSDVEMIP-------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 N+L L R I D M P D ++Y + +GGKRLRP+L LA ++ + Sbjct: 24 ANYLKLSRDRVEIALDASMGPERPESLRDAMRYSLLAGGKRLRPILCLAACELVGGSSEL 83 Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + A A+E IHT +L+HDD+ +D+ LRRG+ V+G+ ++L GD +LS+AF MV Sbjct: 84 AMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRAFEMV 143 Query: 122 -IETKSQEALEALSLV--------ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAV 171 + + + A L +V A L G++ L S + +D+ +Y+H+ KTA Sbjct: 144 AVRSANVPADRLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHL--HKTAA 201 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L A + +LI G + QA+++Y +G+AFQ++DD+LD +GK G+D Sbjct: 202 LLRACVVTGALIGGANDDQLQAMRTYANGIGLAFQIIDDILDVTASSEVLGKTAGKDLLA 261 Query: 232 GKPTLPVILAFQRGTKREK 250 K T P +L REK Sbjct: 262 DKTTYPKLLGLD--ASREK 278 >gi|34540567|ref|NP_905046.1| polyprenyl synthetase [Porphyromonas gingivalis W83] gi|34396880|gb|AAQ65945.1| polyprenyl synthetase [Porphyromonas gingivalis W83] Length = 325 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 124/229 (54%), Gaps = 7/229 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 + Y++ GGKR+RP L M + GD L A AIE H TLLHDD++D S++R Sbjct: 32 ISYILRLGGKRVRPTLACIACEM--FGGDYKPALEVAMAIETYHNFTLLHDDLMDKSSMR 89 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL---VACTLAEGELRQL 148 RGK WG+ T++L GD + A+ + + S+ L L +A + +G+ + Sbjct: 90 RGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDSRLLPVLLPLFNRMAMEICQGQQYDM 149 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + V E++YL +I+ KTAVL + AL++ ++ G L YG+++G++FQL Sbjct: 150 DFERRDFVAEDEYLEMIRLKTAVLLATALKMGAIAGGADIEKADILYRYGIHIGLSFQLE 209 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 DD+LD G+ +GK IG+D K T+ +I A + E N + ++ Sbjct: 210 DDLLDVYGDPIILGKKIGDDIACNKKTMLLIKALEMAQGEELNLLRESL 258 >gi|328956986|ref|YP_004374372.1| geranyltranstransferase [Carnobacterium sp. 17-4] gi|328673310|gb|AEB29356.1| geranyltranstransferase [Carnobacterium sp. 17-4] Length = 299 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 82/226 (36%), Positives = 127/226 (56%), Gaps = 13/226 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L LAT L ++ A+EFIHT +L+HDD+ +D+ LRRG Sbjct: 38 YSLEAGGKRIRPLLLLATIQSLGGDIRKGYAVSAALEFIHTYSLIHDDLPAMDNDDLRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVACTLAEGE---LRQLS 149 K + +V+G T++L GD LL+QAF ++ + S E L L A E L Q++ Sbjct: 98 KPTSHIVYGEDTAILAGDALLTQAFEIIAVSDASPEKKVKLILALAKSAGPEGMILGQMA 157 Query: 150 ----LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 +K+L + E ++H ++KT L + + +IA V + L Y ++G+A+ Sbjct: 158 DIQGETKDLSLEELQFIH--RNKTGELLKFPIYAACVIADAATEVEEQLMGYAEHIGLAY 215 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 Q+ DD+LD G V E+GKNIG D + K T P +L + G K+ N Sbjct: 216 QIRDDILDVIGNVEEIGKNIGMDAAHNKSTYPGLLTLE-GAKKALN 260 >gi|167752314|ref|ZP_02424441.1| hypothetical protein ALIPUT_00558 [Alistipes putredinis DSM 17216] gi|167660555|gb|EDS04685.1| hypothetical protein ALIPUT_00558 [Alistipes putredinis DSM 17216] Length = 329 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 130/248 (52%), Gaps = 7/248 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-----V 65 D+E I ++ +D ++ +++ Y + + GK +RPM L +A + G + Sbjct: 14 DLEAFEQFIRQKFTADGTLLSEMLDYALSARGKGIRPMTVLLSAALNAPAGQRSGGLRAL 73 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 L A +E IH A+L+HDDV+D+S +RRG+ + W ++ +V+VGD++L++ + +++ Sbjct: 74 LAATLVEMIHVASLIHDDVIDESDMRRGRASVNARWQSRNAVVVGDYILAKNMDLGLKSG 133 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + + + TL EGE+ Q + ++T YL +I KTA L + +L G Sbjct: 134 QFDLVTHVCGAIATLCEGEILQNDKANRQEMTRASYLDIIYKKTACLIGVSASAGALAVG 193 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR- 244 + ++ +G ++G+AFQ+ DD+LDY GK D R K TLP++ + Sbjct: 194 ASREKQALMRKFGESIGMAFQIQDDILDYT-RTARTGKPSNNDLREHKVTLPLLTVLESV 252 Query: 245 GTKREKNF 252 G +R + Sbjct: 253 GEERRREL 260 >gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 309 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 76/241 (31%), Positives = 127/241 (52%), Gaps = 11/241 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKRLRP+L LAT ++ + + ACA+E IHT +L+HDD+ +D+ Sbjct: 46 IYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDN 105 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVA--------C 138 RRGK+ V+G ++L GD LL+ AF V +T + L+ L ++A Sbjct: 106 DDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTLNVPPLQILEVIARLGRTVGAA 165 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ L D++ E + KT L ++ +++AG + L Y Sbjct: 166 GLVGGQVLDLESEGKPDISAETLGFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYA 225 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 N+G+AFQ++DDVLD E+GK G+D + K T P + + ++ ++ S IN Sbjct: 226 QNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGIEGSRQQAQHLIDSAIN 285 Query: 259 D 259 + Sbjct: 286 E 286 >gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa NIES-843] gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa NIES-843] Length = 309 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 11/241 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKRLRP+L LAT ++ + + ACA+E IHT +L+HDD+ +D+ Sbjct: 46 IYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDN 105 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVA--------C 138 RRGK+ V+G ++L GD LL+ AF V +T++ L+ L ++A Sbjct: 106 DDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTRNVPPLQILEVIARLGRTVGAA 165 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G++ L + D++ E + KT L ++ +++AG + L Y Sbjct: 166 GLVGGQVLDLESAGKPDISAETLGFIHTQKTGALLETSVVSGAVLAGAKAEDIAKLARYA 225 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 N+G+AFQ++DDVLD E+GK G+D + K T P + + ++ + S I Sbjct: 226 QNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQKATYPSLWGIEESRQQAQQLIDSAIG 285 Query: 259 D 259 + Sbjct: 286 E 286 >gi|154148638|ref|YP_001406457.1| bifunctional short chain isoprenyl diphosphate synthase [Campylobacter hominis ATCC BAA-381] gi|153804647|gb|ABS51654.1| bifunctional short chain isoprenyl diphosphate synthase [Campylobacter hominis ATCC BAA-381] Length = 297 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 117/199 (58%), Gaps = 15/199 (7%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIET 124 CAI E IH A+LLHDDV+D+S +RRG + V+G++ +V++GD S+AF C + Sbjct: 52 CAIVELIHAASLLHDDVIDESDIRRGNPSINAVFGSKNAVMLGDIFYSKAFFELCSFNDF 111 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 S+ +S L+ GEL + +S+N + E+YL +I KTA L + ++ + +A Sbjct: 112 ISK----TISNAVFKLSIGELMDVKMSENFNKNRENYLTMIYYKTAGLIESVAKIGAFLA 167 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NS + YG NLG+AFQ++DD+LD + ++GK DF++GK TLP I +++ Sbjct: 168 ---NSDCEKFAEYGKNLGLAFQIIDDILDITQDSKKLGKPALNDFKDGKTTLPYIYLYEK 224 Query: 245 GTKREK----NFWKSTIND 259 E+ +++K +ND Sbjct: 225 LPLNEREILQSYFKKELND 243 >gi|300866343|ref|ZP_07111044.1| trans-hexaprenyltranstransferase [Oscillatoria sp. PCC 6506] gi|300335648|emb|CBN56204.1| trans-hexaprenyltranstransferase [Oscillatoria sp. PCC 6506] Length = 323 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 161/292 (55%), Gaps = 8/292 (2%) Query: 33 VVKYLIFSGGKRLRP--MLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSA 89 ++L + GKR+RP +L ++ A M H LA E IHTA+L+HDDVVDDS Sbjct: 36 AAEHLFGAKGKRVRPAIVLLISRATMPNQEISPKHRRLAEITEMIHTASLVHDDVVDDSD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 +RRG +GN+ +VL GDFL +Q+ + + E ++ LS V LAEGE++Q Sbjct: 96 VRRGIPTVHSYFGNRVAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLAEGEIQQGL 155 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + ++ E YL KTA L + + + + ++GV + L +YG ++G+AFQ+VD Sbjct: 156 NGFDTTLSIEAYLEKSYYKTASLIANSSKAAGCLSGVSAQLADDLYNYGRDIGLAFQIVD 215 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD+ G +GK G D ++G T PV+ A + EK + ++ I ++++ Sbjct: 216 DILDFTGSTETLGKPAGSDLKSGNLTAPVLFALE-----EKPYLEALIEREFAQEGDIEQ 270 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++++++ + + A + Q A L LP S K++L+++ D+ L RL Sbjct: 271 AIALVKDSKGIERSRELAAHHAQAAVVRLAGLPPSESKQALIDLADYVLSRL 322 >gi|317128581|ref|YP_004094863.1| heptaprenyl diphosphate synthase component II [Bacillus cellulosilyticus DSM 2522] gi|315473529|gb|ADU30132.1| heptaprenyl diphosphate synthase component II [Bacillus cellulosilyticus DSM 2522] Length = 323 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 88/310 (28%), Positives = 164/310 (52%), Gaps = 1/310 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ K+ I I ++ ++ + +L+ +GGKR+RP+ L +A EY + + A Sbjct: 13 DINKIEKEIELNIDANHPILQEASSHLLKAGGKRIRPVFVLLSAQFGEYNIEEIKNIGVA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH A+L+HDDVVDD+ LRRGK + W N+ ++ GD++ ++A + + + Sbjct: 73 LEMIHMASLVHDDVVDDADLRRGKKTIKSKWDNRVAMYTGDYIFAKAVEIATYYDTPDIH 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS + GE+ Q+ + + Y IK KTA+L + + ++ ++ +G + Sbjct: 133 KILSHALVEMCIGEVEQIRDQYDWNQNLRMYFRRIKRKTALLIAISCQLGAIASGAPEAH 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL +G N+G+AFQ+ DD+LD+ G E+GK G D G TLP + A R K Sbjct: 193 VRALSRFGYNVGMAFQITDDILDFVGTEKELGKPAGSDLLQGNITLPALYAMCR-CDDVK 251 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 +++ + + + + ++++ A+ ++ A Y K+ ++L LPDS K +L Sbjct: 252 GRIIHHLDENVMDKKEMGETISLIKDTGAIDFSKNIADRYLMKSIEALNQLPDSKAKTAL 311 Query: 311 MEVVDFCLQR 320 ++ ++ R Sbjct: 312 QKIANYIGDR 321 >gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 309 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 124/241 (51%), Gaps = 11/241 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L LAT ++ + + ACA+E +HT +L+HDD+ + Sbjct: 44 EKIYEAMRYSLLAGGKRLRPILCLATCELMGGTMEMAMPTACALEMLHTMSLIHDDLPAM 103 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVA------- 137 D+ RRGK+ V+G ++L GD LL+ AF V +T+ A L ++A Sbjct: 104 DNDDYRRGKLTNHKVYGEDMAILAGDGLLAYAFEYVATQTQGVPAERVLQVIARLGRTVG 163 Query: 138 -CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ L D+ EE ++ KT L + ++AG ++ + L Sbjct: 164 AAGLVGGQVVDLESEGKSDIQEETLHYIHTHKTGALLETCVVCGGILAGATDADIERLSR 223 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y N+G+AFQ++DD+LD E+GK G+D + K T P + + + + + Sbjct: 224 YAQNIGLAFQIIDDILDITATQEELGKTAGKDLQAQKATYPSLWGLEASKAKAQELIEEA 283 Query: 257 I 257 I Sbjct: 284 I 284 >gi|255722599|ref|XP_002546234.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240136723|gb|EER36276.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 480 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 134/295 (45%), Gaps = 46/295 (15%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + + N+ +VL GDFLL +A + ++ Sbjct: 189 LAEIVEMIHTASLLHDDVIDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIARLRN 248 Query: 127 QEALEALSLVACTLAEGELRQLSLS----------------------------------- 151 E +E LS L EGE QL + Sbjct: 249 PEVIELLSTTIANLVEGEFMQLKNTVIQNNNDDQIVNDGEVKEIPRPTGKVPTKLHDYSV 308 Query: 152 ------KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 N+D E YLH KTA L S + +++++G Q+ V + S+G NLG+ F Sbjct: 309 RTVDHETNVDAAFEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDVIENCYSFGRNLGLCF 368 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 Q+VDD+LDY +GK D + G T P++ A++ + + G + + Sbjct: 369 QIVDDMLDYTSSDKAIGKPSQADLKLGLATAPILYAWKEEPALGELIGRKFSQPGDVEI- 427 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A + + + T A Y +A +LRCLPDS + +L + + L R Sbjct: 428 ----ARRAVDKYNGVEKTREMATMYCHEALKNLRCLPDSEARSALELLTNSVLTR 478 >gi|297617504|ref|YP_003702663.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297145341|gb|ADI02098.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 345 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 87/246 (35%), Positives = 124/246 (50%), Gaps = 5/246 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK LRP L L + +L D V +A A+E IH A+L+HDD++D + LRRG ++ Sbjct: 37 GKMLRPRLVLLSRGLLGPIEDLTVDVAVAVECIHNASLIHDDIIDAAVLRRGAPTINHLY 96 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161 G + +VLVGD + AF ++ + + LS + +GE+ Q N +TE+DY Sbjct: 97 GPKIAVLVGDHYFAAAFGLLTRHNLKHIMRELSDAIQDMCKGEIYQDLNLFNPYITEDDY 156 Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 I KTA LFSAA + G + +G LG A+Q+ DD+ D G+ +M Sbjct: 157 WTSIFGKTASLFSAACRCGVMAGGGSAREVYLMGKFGRELGYAYQVADDINDLIGDEEKM 216 Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281 GK G D NG TLPVI A + +RE I +I +LKK ++ E A Sbjct: 217 GKPAGTDLVNGVITLPVIRALKISPERE--LISFLILSRRIYGSDLKKVIALIEECGAF- 273 Query: 282 DTEYRA 287 EY A Sbjct: 274 --EYAA 277 >gi|184155577|ref|YP_001843917.1| polyprenyl synthase [Lactobacillus fermentum IFO 3956] gi|227514942|ref|ZP_03944991.1| trans-hexaprenyltranstransferase [Lactobacillus fermentum ATCC 14931] gi|183226921|dbj|BAG27437.1| polyprenyl synthase [Lactobacillus fermentum IFO 3956] gi|227086706|gb|EEI22018.1| trans-hexaprenyltranstransferase [Lactobacillus fermentum ATCC 14931] Length = 328 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 92/313 (29%), Positives = 157/313 (50%), Gaps = 13/313 (4%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML-----TLATALMLEYRGDNHVLLAC 69 V+ L+ RI + + ++ + +GGK LRP +L E R D + LA Sbjct: 20 VSDLMAARIKTKDGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQR-DRLIKLAT 78 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +IE +H ATL+HDD++DDS RRG+++ + +G +V GD+L + F ++ T + Sbjct: 79 SIEVLHMATLIHDDIIDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDLITTTTATTP 138 Query: 130 LEALSL-VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + + GEL Q++ D T YL I KTA LFS A + G Sbjct: 139 FLTTNAQIMHRILSGELGQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGADQ 198 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 K G N+GIAFQ++DD+LDY +++ K + ED G +LP++LA Q + Sbjct: 199 RTVALAKRIGQNVGIAFQILDDILDY-SSGDQLNKPVLEDLATGVYSLPLLLAMQANSAA 257 Query: 249 EKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 +K ++ G++ E +++ ++ EN + A ++ +KAK + LP S + Sbjct: 258 ----FKPLLDKGRLMSEADMQLVRQLVLENGGVEQARQLATAFTKKAKAEINQLPAGSSR 313 Query: 308 KSLMEVVDFCLQR 320 ++L ++ L+R Sbjct: 314 RALTKLCQRLLKR 326 >gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399] gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399] Length = 295 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 117/212 (55%), Gaps = 11/212 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 + Y + +GGKRLRP+L +A A + G + ACA+E IHT +L+HDD+ +D+ R Sbjct: 38 MAYSLMAGGKRLRPILLMAAADAVGVDGTKFITAACALEMIHTYSLIHDDLPAMDNDDYR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEG 143 RGK+ V+ T++L GD LL+ AF +++ + A L +V A + G Sbjct: 98 RGKLTNHKVYDEGTAILAGDALLTLAFTVILRQQDVPAERLLRVVDETGRAAGAEGMVGG 157 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 ++ L ++N ++ E+ V KT LF AAL +++AG AL +Y + G+ Sbjct: 158 QMLDLE-AENRRISMEELRRVHMGKTGALFRAALRCGAILAGASERQLAALTAYADHFGL 216 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 AFQ+ DD+LD G ++GK +G D +N K T Sbjct: 217 AFQITDDILDVIGTAEDIGKPVGSDEKNHKST 248 >gi|320161454|ref|YP_004174678.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1] gi|319995307|dbj|BAJ64078.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1] Length = 338 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 87/267 (32%), Positives = 134/267 (50%), Gaps = 18/267 (6%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GKR+RP+L L +A + + + + A A+E +H +L+HDD+ D S LRRG+ + W Sbjct: 54 GKRIRPLLVLLSAQAVGGKWEQALPAAAAVELVHNFSLIHDDIQDQSTLRRGRPTVWVKW 113 Query: 102 GNQTSVLVGDFLLSQAFCMVIETK----SQEALEA---LSLVACTLAEGELRQLSLSKNL 154 G ++ GD + +QAF + + SQ ALEA L V L EG+ L+ K Sbjct: 114 GIAQAINAGDAMFTQAFWALNRLEQTISSQTALEASRILHQVCLRLTEGQYLDLAYEKVD 173 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 + E Y ++ KTA L +E+ L + R AL+ +G NLG+AFQ++DD L Sbjct: 174 TLPLEAYWPMVGGKTAALLGGCVELGGLCSHASPEQRTALREFGENLGLAFQVLDDWLGI 233 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF---WKSTINDGKISVENLKKAF 271 G+ GK+ D +GK +LPV+ G + F W+ GKI+ E + Sbjct: 234 WGDAALTGKSTESDLVSGKKSLPVLY----GLANSETFAQRWRR----GKITSEEVHDIA 285 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSL 298 ++++ A T A QKA D+L Sbjct: 286 GLLQDCGAEAFTLNTAEELTQKALDAL 312 >gi|260662978|ref|ZP_05863871.1| polyprenyl synthase [Lactobacillus fermentum 28-3-CHN] gi|260552599|gb|EEX25599.1| polyprenyl synthase [Lactobacillus fermentum 28-3-CHN] Length = 327 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 92/313 (29%), Positives = 157/313 (50%), Gaps = 13/313 (4%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML-----TLATALMLEYRGDNHVLLAC 69 V+ L+ RI + + ++ + +GGK LRP +L E R D + LA Sbjct: 19 VSDLMAARIKTKDGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQR-DRLIKLAT 77 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +IE +H ATL+HDD++DDS RRG+++ + +G +V GD+L + F ++ T + Sbjct: 78 SIEVLHMATLIHDDIIDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDLITTTTATTP 137 Query: 130 LEALSL-VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + + GEL Q++ D T YL I KTA LFS A + G Sbjct: 138 FLTTNAQIMHRILSGELGQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGADQ 197 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 K G N+GIAFQ++DD+LDY +++ K + ED G +LP++LA Q + Sbjct: 198 RTVALAKRIGQNVGIAFQILDDILDY-SSGDQLNKPVLEDLATGVYSLPLLLAMQANSAA 256 Query: 249 EKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 +K ++ G++ E +++ ++ EN + A ++ +KAK + LP S + Sbjct: 257 ----FKPLLDKGRLMSEADMQLVRQLVLENGGVEQARQLATAFTKKAKAEINQLPAGSSR 312 Query: 308 KSLMEVVDFCLQR 320 ++L ++ L+R Sbjct: 313 RALTKLCQRLLKR 325 >gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus elongatus BP-1] gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus elongatus BP-1] Length = 307 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 80/229 (34%), Positives = 120/229 (52%), Gaps = 13/229 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I D ++Y + +GGKRLRP+L LAT ++ + + ACA+E IHT +L+HDD+ + Sbjct: 42 EKIYDAMRYSLMAGGKRLRPILCLATCELMGGTVEMAMPTACALEMIHTMSLIHDDLPAM 101 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL---------SLV 136 D+ RRGK V+G ++L GD LL+ AF V+E E L ++ Sbjct: 102 DNDDYRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVEQTKNVPAEYLLKIVARLGHAVA 161 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L D+ E LH I S KT L A++ +L+ G S L Sbjct: 162 ATGLVGGQVVDLECEGQPDIGLET-LHFIHSHKTGALLEASVVSGALLTGAHESDVARLS 220 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y N+G+AFQ+VDD+LD + +GK +G+D K T P + ++ Sbjct: 221 RYAANIGLAFQIVDDILDITSTRDVLGKTVGKDVAAQKMTYPRLWGLEK 269 >gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus elongatus] Length = 307 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 80/229 (34%), Positives = 120/229 (52%), Gaps = 13/229 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I D ++Y + +GGKRLRP+L LAT ++ + + ACA+E IHT +L+HDD+ + Sbjct: 42 EKIYDAMRYSLMAGGKRLRPILCLATCELMGGTVEMAMPTACALEMIHTMSLIHDDLPAM 101 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL---------SLV 136 D+ RRGK V+G ++L GD LL+ AF V+E E L ++ Sbjct: 102 DNDDYRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVEQTKNVPAEYLLKIVARLGHAVA 161 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L D+ E LH I S KT L A++ +L+ G S L Sbjct: 162 ATGLVGGQVVDLECEGQPDIGLET-LHFIHSHKTGALLEASVVSGALLTGAHESDVARLS 220 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y N+G+AFQ+VDD+LD + +GK +G+D K T P + ++ Sbjct: 221 RYAANIGLAFQIVDDILDITSTRDVLGKTVGKDVAAQKMTYPRLWGLEK 269 >gi|169828970|ref|YP_001699128.1| geranyltranstransferase [Lysinibacillus sphaericus C3-41] gi|168993458|gb|ACA40998.1| Geranyltranstransferase [Lysinibacillus sphaericus C3-41] Length = 293 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 83/274 (30%), Positives = 138/274 (50%), Gaps = 25/274 (9%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + + +E+ F ++ +I + V++ D + Y + +GGKR+RP+ LA + Sbjct: 5 LKYFIESNIPQIEETMFALVSKIDAPVDL-KDSMLYSLKAGGKRIRPLFVLAVLELYRKN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + +++ IE IHT +L+HDD+ +D+ RRGK V+G + L GD L + AF Sbjct: 64 LQDGLIVGAVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLAF 123 Query: 119 CM-----VIETKSQEALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHV 164 + V K E ++ LS+ A EGE RQL D+TE + +HV Sbjct: 124 GILARMDVTAEKRIELVQLLSVAAGAEGMVGGQVLDMEGEQRQL------DLTELEQVHV 177 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 +KT L ++E +++A R LK Y ++G+AFQ+ DD+LD G E+GK Sbjct: 178 --NKTGALLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGKT 235 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 G+D + K T P +L ++ ++ IN Sbjct: 236 AGKDVASDKSTYPALLTLDGAKEKLAEHYQHAIN 269 >gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425] gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425] Length = 320 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 119/227 (52%), Gaps = 11/227 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I ++Y + +GGKRLRP+L LAT M + + ACA+E IHT +L+HDD+ + Sbjct: 55 EKIYQAMRYSLMAGGKRLRPILCLATCEMTGGTVEMAMPTACALEMIHTMSLIHDDLPAM 114 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVA------- 137 D+ RRGK+ V+G ++L GD LL+ AF V ++T+ A L +VA Sbjct: 115 DNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEYVAVKTQGVPAEWLLKVVARLGHAVA 174 Query: 138 -CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ L DV+ E + KT L A++ + + G + V Q L Sbjct: 175 ATGLVGGQVVDLECEGVKDVSVETLNFIHAHKTGALLEASVLCGAYLTGASDEVLQKLSR 234 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 Y N+G+AFQ++DDVLD E+GK G+D R K T P + + Sbjct: 235 YARNVGLAFQIIDDVLDITATQEELGKTAGKDLRAQKVTYPSLWGIE 281 >gi|158604961|gb|ABW74777.1| bifunctional short chain isoprenyl diphosphate synthase [Campylobacter concisus 13826] Length = 297 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 121/201 (60%), Gaps = 11/201 (5%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E IH A+LLHDDV+D++ +RRGK + ++G++ SV++GD L S+A+ + TK Sbjct: 52 CAIIELIHLASLLHDDVIDEANIRRGKPSINALFGSKNSVMLGDILYSKAYFEL--TKFD 109 Query: 128 EALEA-LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ A +S L+ GE+ + +++N + E++YL +I KTAVL A + +AG Sbjct: 110 PSIAAVISDAVSKLSIGEMMDVKMAENFNENEQEYLKMIYYKTAVLIEATAICGAKLAG- 168 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF---- 242 ++S + L YG NLG+AFQ+VDD+LD + +GK DF GK TLP I + Sbjct: 169 KDSEKFGL--YGKNLGLAFQIVDDILDITQDEKTLGKPALNDFVEGKTTLPYIYLYKSLD 226 Query: 243 QRGTKREKNFWKSTINDGKIS 263 + G + ++ W +N +IS Sbjct: 227 EAGKTKLRSLWAKKLNADEIS 247 >gi|297619910|ref|YP_003708015.1| Dimethylallyltranstransferase [Methanococcus voltae A3] gi|297378887|gb|ADI37042.1| Dimethylallyltranstransferase [Methanococcus voltae A3] Length = 316 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 16/295 (5%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-ACAIEFIHTATLLHDDVVDDSALRRG 93 K+L+ +GGKR+RP L++ A L+ G + ++ A ++E IH TL+HDD++D+ RRG Sbjct: 29 KHLLLAGGKRIRPYLSI-MAYNLKKDGLDEIMAPALSVELIHNYTLVHDDIMDNDDERRG 87 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLVACTLAEGELRQLS 149 K V+G ++L GD L ++AF + K+ + L+ LS + EG+ + Sbjct: 88 KPTVHKVYGEPIAILAGDLLYAKAFEALSTIDDSIKAHKVLKILSKACVEVCEGQTDDME 147 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 T E Y+++I KT L A + + +++A +AL Y +GI FQ+ D Sbjct: 148 FETTFP-TMEQYVNMISKKTGALIEAPILIGAIMADCTMEETEALYQYSKRIGINFQIQD 206 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+LD G+ +GK +G D +GK T+ VI A + +K + + E + + Sbjct: 207 DILDLIGDQKTIGKPVGSDILSGKKTMMVIHALDTLSNDKKERLLQILGNENAKSEEITE 266 Query: 270 AFIIMRENRALVDTEYRAYSYGQ---KAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A ++ + EY + +AK+ L+ D + +K L ++ DF + R+ Sbjct: 267 AIGLLSNS-----IEYAKNLMNESTIEAKEFLKIF-DENRRKPLEDIADFIVSRI 315 >gi|257064654|ref|YP_003144326.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens DSM 20476] gi|256792307|gb|ACV22977.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens DSM 20476] Length = 364 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 95/297 (31%), Positives = 154/297 (51%), Gaps = 22/297 (7%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 +GGKR RP++ LA + GD L A AIE HTA L+HDD+ D++ LRRG+ Sbjct: 74 NGGKRHRPLICLAACAAVG--GDVRKALSSAAAIEHFHTAALIHDDIADEATLRRGEPCL 131 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIE-------TKSQEALEALSLVACTLAEGELRQLSL 150 L +G ++ +GD LS V++ TK + E + + T+ EG+ + Sbjct: 132 HLTYGMGLAINMGDLGLSLVNGTVMKDPALDDHTKVRVVTELIEMTRRTI-EGQAMDIGW 190 Query: 151 SKN--LDVTEEDYLHVIKSKTAVLFSA-ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 +++ D++ E+YL + KTA A L + +++ G +AL++YG++ G+AFQ+ Sbjct: 191 ARDERYDISPENYLIMATHKTAHYSGAVPLAIGAIVGGATEGAIEALRNYGLDTGLAFQI 250 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTINDGKISVE 265 DD+L+ G+ N +GK+ G D GK TL V+ A Q T+R++ S D VE Sbjct: 251 QDDLLNIEGDPNVVGKDWGNDITEGKRTLMVVHALQNSTQRDRLVEILSSKTTDHDALVE 310 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQRL 321 A IMRE+ ++ A + AK+ L L S+ + L+ + D+ + RL Sbjct: 311 ----AVSIMRESGSVEYARNYAENLTSIAKNRLVDMLEPSTARDLLLSMADYFVNRL 363 >gi|329944216|ref|ZP_08292475.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386] gi|328530946|gb|EGF57802.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386] Length = 368 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/241 (31%), Positives = 126/241 (52%), Gaps = 6/241 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE---YR 60 LE + ++ + +++ + S E I +L +GGKRLRP+L L TA + + Sbjct: 12 LEARIVPALQAIEDRLMEVVTSADETINPPTSHLAEAGGKRLRPVLALLTAQLGDPALAA 71 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ A+E H ATL HDDV+D++ LRRG +A+ VWGN ++L GD L+++A Sbjct: 72 GEQIRDAGVAVELTHIATLYHDDVMDEAPLRRGAPSAQTVWGNSAAILTGDVLVARA-SQ 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ EA+ A + L G+L + L D + Y+ V+ KT L + + Sbjct: 131 LVAALGPEAVMAHAKTFERLCMGQLHETLPRPSGTDPVDH-YIQVLADKTGSLIAVSARY 189 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++ G + ++ +G +G+AFQL DDV+D + GK G D R G T+PV+ Sbjct: 190 GAMLTGAGVRTERIVEEFGEKIGVAFQLADDVIDLMSDSATTGKTPGTDLREGVDTMPVL 249 Query: 240 L 240 L Sbjct: 250 L 250 >gi|296481448|gb|DAA23563.1| prenyl diphosphate synthase, subunit 1 [Bos taurus] Length = 418 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/296 (29%), Positives = 143/296 (48%), Gaps = 12/296 (4%) Query: 32 DVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNHV-----LLACAIEFIHTATLLHDDV 84 ++ +Y GK RP++ +A A + + +V +A E IHTA+L+HDD+ Sbjct: 126 EMSEYHFDGKGKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLVHDDI 185 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +DD++ RRGK +WG + +VL GD +LS A + + + L+ V L GE Sbjct: 186 IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGE 245 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 QL +N + YL KTA L + + + S++ +V + YG N+GIA Sbjct: 246 FLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIA 305 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQL+DDVLD+ +MGK D + G T PV+ A Q+ + + + G Sbjct: 306 FQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFGSPG---- 361 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ +A + ++ + T Y A Y KA + L S + +L+++ + L R Sbjct: 362 -DVDRALQYVLQSDGVQQTTYLAQRYCHKAVSEISKLRPSPERDALIQLSEMVLTR 416 >gi|188994672|ref|YP_001928924.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277] gi|188594352|dbj|BAG33327.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277] Length = 325 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 124/229 (54%), Gaps = 7/229 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 + Y++ GGKR+RP L M + GD L A AIE H TLLHDD++D S++R Sbjct: 32 ISYILRLGGKRVRPTLACIACEM--FGGDYKPALEVAMAIETYHNFTLLHDDLMDKSSMR 89 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL---VACTLAEGELRQL 148 RGK WG+ T++L GD + A+ + + S+ L L +A + +G+ + Sbjct: 90 RGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDSRLLPVLLPLFNRMAMEICQGQQYDM 149 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + V E++YL +I+ KTAVL + AL++ ++ G L YG+++G++FQL Sbjct: 150 DFERRDFVAEDEYLEMIRLKTAVLLATALKMGAIAGGADIEKADILYRYGIHIGLSFQLE 209 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 DD+LD G+ +GK IG+D K T+ +I A + E N + ++ Sbjct: 210 DDLLDVYGDPIILGKKIGDDIACNKKTMLLIKALEIAQGEELNLLRESL 258 >gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142] gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142] Length = 309 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 125/241 (51%), Gaps = 11/241 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L L T ++ + + ACA+E IHT +L+HDD+ + Sbjct: 44 EKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTREMSLPTACALEMIHTMSLIHDDLPAM 103 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVA------- 137 D+ RRGK+ V+G ++L GD LLS AF V +T++ + + ++A Sbjct: 104 DNDDYRRGKLTNHKVYGEDIAILAGDALLSYAFEYVATQTRNVDLANLMDVIARLGRTVG 163 Query: 138 -CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ L DVT + + KT L ++ +++AG + + L Sbjct: 164 AAGLVGGQVLDLESEGRADVTVDTLKFIHIHKTGALLETSVVSGAILAGAKPEDIERLSR 223 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y N+G+AFQ++DD+LD E+GK G+D R+ K T P + + K+ + Sbjct: 224 YAQNIGLAFQIIDDILDVTASTEELGKTAGKDQRDQKATYPSLWGLEESQKQAQALIDDA 283 Query: 257 I 257 I Sbjct: 284 I 284 >gi|329666771|gb|AEB92719.1| putative polyprenyl synthetase [Lactobacillus johnsonii DPC 6026] Length = 350 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 92/321 (28%), Positives = 167/321 (52%), Gaps = 13/321 (4%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP---MLTLATALMLEYRGDNH 64 T KDM +N +ILK + + ++ D +K S GK LRP ML + + + Sbjct: 33 TQKDMIAINLIILKHVNTVPGLLGDALKDTFASPGKMLRPACVMLFGSFGPNANQKREEL 92 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L A + + + Sbjct: 93 QKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLF--ALSLTLLS 150 Query: 125 KSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++ ++L ++ T+ GE Q + + N++++E++YL IK KT VLF A + + Sbjct: 151 ENAQSLHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFGLACFIGA 210 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +G++ + K +G LG AFQL DD+LDY + K + D ++G + P+I A Sbjct: 211 YESGLKVTRALKAKKFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFA 270 Query: 242 FQR-GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-R 299 Q T R K + ++ E L++ ++ + + + A Y KA +L + Sbjct: 271 LQNDSTGRLHELVKLGQD---LTKEQLQEIEKMVNDLGGVKRAQKLADKYTDKALHNLQK 327 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 PD+ ++ L E+ + L+R Sbjct: 328 HWPDNKTRQQLEELTNILLKR 348 >gi|297686215|ref|XP_002820655.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Pongo abelii] Length = 415 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/245 (32%), Positives = 123/245 (50%), Gaps = 7/245 (2%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L +D++ + I K + + ++ +Y GK RP++ +A A + + H Sbjct: 98 LGWRDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRH 157 Query: 65 V-----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 158 VQASQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 217 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 218 ALARIGNTTVICILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 277 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 278 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVL 337 Query: 240 LAFQR 244 A Q+ Sbjct: 338 FACQQ 342 >gi|213962451|ref|ZP_03390713.1| polyprenyl synthetase [Capnocytophaga sputigena Capno] gi|213954777|gb|EEB66097.1| polyprenyl synthetase [Capnocytophaga sputigena Capno] Length = 322 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 131/247 (53%), Gaps = 13/247 (5%) Query: 34 VKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSAL 90 ++Y++ GGKRLRP+LTL AT L + D H L A AIE H +L+HDD++D ++L Sbjct: 31 MRYILQLGGKRLRPILTLIATDL---FDADYHKALNAAMAIEMFHNFSLVHDDIMDKASL 87 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAEGELRQ 147 RRG+ W ++L GD +L +A+ ++ + S + LS A + EG+ Sbjct: 88 RRGETTVHKKWNTNIAILSGDAMLVKAYQLLDDYPSDVFSLLTKILSRTALKVCEGQQWD 147 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + +V+ DYL +I+ KTAVL AAL++ +IA + + ++G LG+AFQL Sbjct: 148 MDFETQTEVSIPDYLQMIRYKTAVLIGAALQMGVIIANASPENQMPIYTFGEELGLAFQL 207 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF---WKSTINDGKISV 264 DD LD G+ GK IG D K T+ + A + ++++ +T D + + Sbjct: 208 QDDYLDAFGD-ESFGKRIGGDIIENKKTILYLTALKLADEQQRKTLLQHYATTEDSQQKI 266 Query: 265 ENLKKAF 271 +K F Sbjct: 267 NTVKALF 273 >gi|328713339|ref|XP_001947197.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Acyrthosiphon pisum] Length = 338 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 112/218 (51%), Gaps = 6/218 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL------LACAIEFIHTATLLHDDVVD 86 + Y GK LRPM+ + A + Y +N+ L +A E IH+A+L+HDDV+D Sbjct: 115 IATYYFDGQGKALRPMVAILMAHAINYHMNNNGLDKKQREVAMIAEMIHSASLIHDDVID 174 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 S RRGK + +W ++ + GD++L+ M+ + LS + L +GE Sbjct: 175 QSDFRRGKPSVNALWSHKKVAMAGDYILAVTSMMIARLNHNDVTITLSQIITDLVQGEFM 234 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 QL + + YL KTA L + +++ +++AG + + YG N+G+AFQ Sbjct: 235 QLGSKETENERFAHYLTKTYRKTASLIANSVKAEAMLAGADDQLVDVSFEYGRNIGLAFQ 294 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LVDD+LD+ + MGK D + G T PV+ A ++ Sbjct: 295 LVDDLLDFVSSKDAMGKPTAADLKLGLATAPVLFACEK 332 >gi|154152049|ref|NP_001093801.1| decaprenyl-diphosphate synthase subunit 1 [Bos taurus] gi|151556844|gb|AAI49262.1| PDSS1 protein [Bos taurus] Length = 418 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/296 (29%), Positives = 143/296 (48%), Gaps = 12/296 (4%) Query: 32 DVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNHV-----LLACAIEFIHTATLLHDDV 84 ++ +Y GK RP++ +A A + + +V +A E IHTA+L+HDD+ Sbjct: 126 EMSEYHFDGKGKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLVHDDI 185 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +DD++ RRGK +WG + +VL GD +LS A + + + L+ V L GE Sbjct: 186 IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGE 245 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 QL +N + YL KTA L + + + S++ +V + YG N+GIA Sbjct: 246 FLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIA 305 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQL+DDVLD+ +MGK D + G T PV+ A Q+ + + + G Sbjct: 306 FQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFGSPG---- 361 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ +A + ++ + T Y A Y KA + L S + +L+++ + L R Sbjct: 362 -DVDRALQYVLQSDGVQQTTYLAQRYCHKAVSEISKLRPSPERDALIQLSEMVLTR 416 >gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541] gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541] Length = 291 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 120/214 (56%), Gaps = 11/214 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + +GGKRLRP+L +A A + G + ACA+E IHT +L+HDD+ +D+ Sbjct: 32 EAMEYSLMAGGKRLRPILLMAAADAVGSDGTKLLPAACALEMIHTYSLIHDDLPAMDNDD 91 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLA 141 RRGK+ V+G+ ++L GD LL+ AF +++ K A+ L +V A + Sbjct: 92 YRRGKLTNHKVYGDGIAILAGDALLTLAFTVLLRQKDVPAVSLLRVVDEISRAAGAEGMV 151 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G++ L ++N ++ ++ V KT LF AAL +++ G AL +Y + Sbjct: 152 GGQVLDLQ-AENKTISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLTALTAYADHF 210 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 G+AFQ+ DD+LD G ++GK +G D +N K T Sbjct: 211 GLAFQITDDILDVVGNAEDIGKPVGSDEKNHKST 244 >gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L] gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L] Length = 295 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 137/249 (55%), Gaps = 19/249 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKRLRP+L + + + +G++ V + A+E IHT +L+HDD+ +D+ Sbjct: 32 IFEAMNYSLRAGGKRLRPILLMEAYKLCQGQGEDFVPYSVAMEMIHTYSLIHDDLPALDN 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL-VACTLAEGE-L 145 LRRGK +V+G ++L GD LL+ A+ ++ + + +SL A ++ G + Sbjct: 92 DDLRRGKPTNHIVFGEAMAILAGDALLNTAYETMLNAAFKHSRPEISLRAAYEISRGAGI 151 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + + +DV ED Y+H+ +KTA + ++ +++AG+ ++L Sbjct: 152 YGMIGGQVVDVESEDKKIDKDKLDYIHM--NKTAAMIVGSVRAGAILAGIDEDRLESLTK 209 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y N+G+AFQ+VDD+LD G+ +GK +G D N K T P +L G K ++ Sbjct: 210 YAENIGLAFQIVDDILDIEGDEKLLGKRVGSDLDNDKSTYPSLL----GIDASKKIVENL 265 Query: 257 INDGKISVE 265 I + K S+E Sbjct: 266 IEEAKTSLE 274 >gi|219129739|ref|XP_002185039.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403534|gb|EEC43486.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 325 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/287 (29%), Positives = 151/287 (52%), Gaps = 12/287 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDN----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 GGK++RPM+ L + L ++ + LA E IHTA+L HDDV+D + RRG + Sbjct: 42 GGKKVRPMMVLLLSRALNWQRSDLPQAQRRLAEISEMIHTASLFHDDVIDGAETRRGAPS 101 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 +V+GN+ ++L GD+LL++A + ++ E +E +S + L GE+ QL S + + Sbjct: 102 VHMVFGNKMAILAGDYLLARASICLARLRNVEVVETMSTIIEHLVRGEVMQLRGSTSSER 161 Query: 157 TEEDYLHVIKS---KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 + E ++ ++ KT L + + + ++L+ N + A +G ++G+AFQLVDDVLD Sbjct: 162 SGERLVYYLRKNFYKTGSLMANSCKSAALLGEYPNELVDASYRFGKHVGMAFQLVDDVLD 221 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 + G ++ +GK D G T PV+ A + E + N G I ++A Sbjct: 222 FEGSLSSLGKPALADLTAGLATAPVLFAAEECCDLEPLIDRKFRNTGDI-----ERAVEY 276 Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + ++ + T+ A + + A D++ L S + SL+ + + + R Sbjct: 277 VFQSSGIERTKELARVHAESAMDAILELDSSLHRDSLVHLANKVVAR 323 >gi|227876918|ref|ZP_03995014.1| trans-hexaprenyltranstransferase [Lactobacillus crispatus JV-V01] gi|256843741|ref|ZP_05549229.1| polyprenyl synthetase [Lactobacillus crispatus 125-2-CHN] gi|256850189|ref|ZP_05555619.1| polyprenyl synthetase [Lactobacillus crispatus MV-1A-US] gi|262047813|ref|ZP_06020763.1| polyprenyl synthetase [Lactobacillus crispatus MV-3A-US] gi|293379832|ref|ZP_06625954.1| polyprenyl synthetase [Lactobacillus crispatus 214-1] gi|312978109|ref|ZP_07789854.1| polyprenyl synthetase family protein [Lactobacillus crispatus CTV-05] gi|227863475|gb|EEJ70898.1| trans-hexaprenyltranstransferase [Lactobacillus crispatus JV-V01] gi|256615161|gb|EEU20362.1| polyprenyl synthetase [Lactobacillus crispatus 125-2-CHN] gi|256713161|gb|EEU28152.1| polyprenyl synthetase [Lactobacillus crispatus MV-1A-US] gi|260571870|gb|EEX28441.1| polyprenyl synthetase [Lactobacillus crispatus MV-3A-US] gi|290923604|gb|EFE00485.1| polyprenyl synthetase [Lactobacillus crispatus 214-1] gi|310895084|gb|EFQ44153.1| polyprenyl synthetase family protein [Lactobacillus crispatus CTV-05] Length = 329 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 102/302 (33%), Positives = 156/302 (51%), Gaps = 10/302 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVL 66 K +E+VN LI I + + D + + +GGK LRP L + +A + E + Sbjct: 15 KPLEEVNQLIQATIRTPYSDLQDALLEMASNGGKYLRPSLLILSAQIASKKETVSKQIIQ 74 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +IE +H A+L+HDD++DDS RRGK++ + +G T+V GD L + F +++ S Sbjct: 75 LASSIEILHMASLIHDDIIDDSDERRGKISIQARFGKDTAVYAGDLLFTHFFDLILNAIS 134 Query: 127 -QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 Q+ + + L GEL Q++ NL DYL +K KTA LF A E S Sbjct: 135 EQDYMIKNAHTMHHLLAGELGQMAERFNLSQDFNDYLTNVKGKTAALFRLAAEEGSHFGN 194 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 QAL S+G NLGIAFQ+VDD+LDY G ++ K ED G +LP++LA + Sbjct: 195 GDEQTTQALASFGENLGIAFQIVDDILDYTGG-KQLNKPTLEDLTTGVYSLPILLALSKK 253 Query: 246 TKREK--NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RE+ + K +E ++K I+ + + +T A Y +A +L LP Sbjct: 254 ELREQLVPLLEKKRQMSKNDIEQIQK---ILLNSSVIEETHALAEQYTNRALANLAQLPQ 310 Query: 304 SS 305 ++ Sbjct: 311 TN 312 >gi|154174404|ref|YP_001408390.1| prenyl transferase [Campylobacter curvus 525.92] gi|112802622|gb|EAT99966.1| prenyl transferase [Campylobacter curvus 525.92] Length = 297 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 108/191 (56%), Gaps = 8/191 (4%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D + L IE IH A+LLHDDV+DD+ RRGK + ++G + S+++GD S+ F + Sbjct: 46 DETLRLCAIIELIHLASLLHDDVIDDADTRRGKPSINALFGTKNSIMLGDIFYSKGFFEL 105 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + S +S L+ GEL + LS+N + ++ Y+ +I KTAVL A + Sbjct: 106 AKF-SPNIARLVSEAVSKLSIGELMDVDLSENFNDDKQKYMDMIYYKTAVLIEATAACGA 164 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++AG+ + + YG NLG+AFQ++DDVLD + +GK DF+ GK TLP I Sbjct: 165 ILAGLDET---KFRIYGKNLGLAFQIIDDVLDITQSADTLGKPAMNDFKEGKTTLPYIYL 221 Query: 242 F----QRGTKR 248 + ++G KR Sbjct: 222 YEALDEKGKKR 232 >gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa] gi|1345836|sp|P48368|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog; Short=GGPP synthase; AltName: Full=Farnesyltranstransferase gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa] Length = 300 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 85/267 (31%), Positives = 141/267 (52%), Gaps = 31/267 (11%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 I D ++Y + +GGKR+RP+L LA+ + + + ACA+E IHT +L+HDD+ +D Sbjct: 36 FIYDSIRYSLSAGGKRIRPILCLASCELAGGTMEMALPTACALEMIHTMSLIHDDLPAMD 95 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEA--------LEALSLVA 137 + + RRGK +++G ++L GD LL+ AF + +TK+ A A S+ Sbjct: 96 NDSYRRGKPTNHIIYGEDLAILAGDALLAYAFEFIATQTKNVPADLIVKVIAQVAHSVTT 155 Query: 138 CTLAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ LS D T E +++H+ KT L AA+ +L+AG + Sbjct: 156 SGLVGGQIIDLSSEGKSDTTLETLNFIHI--HKTGALLEAAVLSGALLAGAKEKDMNRFL 213 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW-- 253 Y N+G+AFQ++DDVLD ++GK+IG+D + K T P +FW Sbjct: 214 RYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATYP-------------SFWGV 260 Query: 254 KSTINDGKISVENLKKAFIIMRENRAL 280 + +I ++ VE K+ I+ +N+A+ Sbjct: 261 EESIKQAELLVEEAKEE-ILYFDNKAI 286 >gi|222478679|ref|YP_002564916.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239] gi|222451581|gb|ACM55846.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 280 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 110/203 (54%), Gaps = 5/203 (2%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V +++ +GGKR+RP +T+ + D V A IEF+H A+L+ DD++D S +RRG Sbjct: 31 VGHVVLAGGKRVRPAVTILACEAFDGDPDAAVDFAAGIEFVHNASLVIDDIIDRSEVRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 +A +G +++ D LL +AF + + A+ ++ L EGE +L+ Sbjct: 91 TPSAWAEYGYGPAIIASDGLLGEAFALF--SADPRAMRTVAEALVELGEGEATELAARPT 148 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TE +Y+ + + KT LF AA E+ ++ G + + Y +G+AFQ+ DDVLD Sbjct: 149 ---TEAEYMELARRKTGALFRAAAELGAIAGGADSHAVDSFGEYAERVGVAFQMRDDVLD 205 Query: 214 YRGEVNEMGKNIGEDFRNGKPTL 236 + +++GK G+D +P++ Sbjct: 206 ATADADDLGKPTGQDAEMDRPSV 228 >gi|260585122|ref|ZP_05852863.1| heptaprenyl diphosphate synthase component II [Granulicatella elegans ATCC 700633] gi|260157210|gb|EEW92285.1| heptaprenyl diphosphate synthase component II [Granulicatella elegans ATCC 700633] Length = 325 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 87/317 (27%), Positives = 163/317 (51%), Gaps = 15/317 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLA 68 +++ + L+L + + E I + ++ GGK +RP LTL +A Sbjct: 16 QELSAIRHLMLDSVEMEDEDIHQAIVEMLQQGGKMIRPAYLTLFANWSNNGNPQQVRAVA 75 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H ATLLHDDV+D++ +RRG+ +GN+ ++ GDF+L+ C + + Sbjct: 76 AALELLHVATLLHDDVIDEADMRRGQETLNARYGNRVAIYAGDFVLTS--CYQLLSTHLS 133 Query: 129 ALEALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 LE ++L +A EGEL Q+ D+ ++YL I+ KTA LF + + + + Sbjct: 134 DLEGITLPTNGMARVVEGELAQMRNRYRYDLGLQEYLKRIEGKTAQLFMVSCYMGAKLGQ 193 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + +++R K G +G+AFQ++DD+LDY+ E GK + ED G T P+I A ++ Sbjct: 194 MDDALR--AKKIGQQIGMAFQILDDILDYQVTPQEFGKPVLEDVAQGIYTAPLIYALEKE 251 Query: 246 TKREKNFWKSTINDGKISVENLKKAFI--IMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 +++ + + K + +K + +++++ + + A Y ++A + LP+ Sbjct: 252 SQK-----IIPLLEKKQEISEQEKLLLRKLVQDSGGVQKAQQLAMQYTKQALSQIERLPE 306 Query: 304 SSWKKSLMEVVDFCLQR 320 S K +L ++ L+R Sbjct: 307 SDMKATLTQLTKQLLER 323 >gi|165976224|ref|YP_001651817.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876325|gb|ABY69373.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 297 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 89/266 (33%), Positives = 143/266 (53%), Gaps = 24/266 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y + GGKR+RP L AT ML+ + A A+E IH +L+HDD+ +DD Sbjct: 36 EAMSYAVLLGGKRVRPFLIYATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLPAMDDDK 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACTLAEGEL 145 LRRGK + + T++L GD L S AF ++ + T SQ+ + SL A G Sbjct: 96 LRRGKPTCHIAFDEATAILAGDALQSFAFELIAQDESLTDSQKVRQIQSLTQAAGARG-- 153 Query: 146 RQLSLSKNLDVTEEDY------LHVI-KSKTAVLFSAALEVS-SLIAGVQN-SVRQALKS 196 + L ++LD+ ED L +I ++KT L A++ + +L A QN +V+Q L+ Sbjct: 154 --MCLGQSLDLLAEDKAVNLAELELIHRNKTGALIIASVLMGFNLSAHSQNLAVKQQLER 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y +G+AFQ+ DD+LD GE +++GK +G D K T P +L + K+ ++ +++ Sbjct: 212 YAQAIGLAFQVQDDILDVIGETHKIGKTVGSDENLHKSTYPKLLGLEGAQKKAQDLYQTA 271 Query: 257 IN---DGKISVENLKK--AFIIMREN 277 +N + LK+ FI+ REN Sbjct: 272 LNALEELPFDTTALKELAHFIVKREN 297 >gi|281207569|gb|EFA81752.1| trans-prenyltransferase [Polysphondylium pallidum PN500] Length = 529 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 146/294 (49%), Gaps = 25/294 (8%) Query: 42 GKRLRP--MLTLATALMLEYRGDN-----------HVLLACAIEFIHTATLLHDDVVDDS 88 GKR+RP +L LA AL + + + LA +E IHTA+L+HDDV+DD+ Sbjct: 244 GKRIRPTILLLLARALSIANSANPANQSAIQPSSVQMRLAEIVEMIHTASLVHDDVIDDA 303 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RR + + N+ ++L GDFLLS+A ++ K+ E E +S V L EGE Q+ Sbjct: 304 DTRRDVPSINHTYSNKLAILCGDFLLSRASVLLSTLKNHEVTELMSTVISDLVEGEFMQI 363 Query: 149 SLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 S + D+ Y+ KTA L + + +++++G V +G NLG+AFQ+ Sbjct: 364 KASGSSFDI----YIRKTYLKTASLIANSCRSTAILSGSDRQVIDIATDFGKNLGLAFQI 419 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE-N 266 VDD+LD+ +GK D G T PV+ A Q + E T+ + K S+ + Sbjct: 420 VDDLLDFTSSTESLGKPASVDLSLGLATAPVLFAAQEFPELE------TLIERKFSMPGD 473 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +A ++ ++ + T A Y KA SL LP S + L+ + + R Sbjct: 474 VDEARRLVFQSNGIEKTRSLAIDYCNKAIQSLMLLPPSEPRDLLITLTHTVVTR 527 >gi|118586922|ref|ZP_01544355.1| trans-hexaprenyltranstransferase, component II [Oenococcus oeni ATCC BAA-1163] gi|118432649|gb|EAV39382.1| trans-hexaprenyltranstransferase, component II [Oenococcus oeni ATCC BAA-1163] Length = 325 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 88/304 (28%), Positives = 157/304 (51%), Gaps = 4/304 (1%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L+ K I +D E + + +I SGGK LRP L ++ + + + LA AIE +H A Sbjct: 23 LMQKNIKTDNEPVSKAILEMINSGGKLLRPAYLLLFSMFQKTDRNKIIALAAAIEILHMA 82 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV 136 TL+HDDV+D+S RRG + + +G T+V GD+L F ++ E S ++ Sbjct: 83 TLIHDDVIDESPTRRGMSSIQKQFGQSTAVYSGDYLFVVCFNLLAEYASDFRGIQQYGHH 142 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + GE+ Q+ +L+++ + Y I KT LFS A + + +G + + + Sbjct: 143 MNAILNGEMTQMVERYDLNISIDQYFKQISGKTGQLFSLATFLGAYESGNKIKFAKNAEK 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 G+N+G++FQL+DD+LDY ++GK + + R G + P+ILA + + F+ Sbjct: 203 IGLNIGVSFQLMDDILDYTDNSQQIGKPVHNNMREGVYSAPLILAM---AQHKDLFFPFL 259 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 K++ ++ ++ ++ E + + A +Y +KA + LPD KK+L+++ Sbjct: 260 KKKNKMTDQDTEEIAKLVIEFDGIKKAKKYAETYTKKALIQINDLPDKPAKKALIDITRE 319 Query: 317 CLQR 320 L R Sbjct: 320 LLDR 323 >gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1] gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1] Length = 337 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 82/237 (34%), Positives = 122/237 (51%), Gaps = 15/237 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI--EFIHTATLLHDD 83 + E I + +KY + +GGKR+RP+L LA M GD+ + A+ E IHT +L+HDD Sbjct: 69 ETEKIVEAMKYSLMAGGKRIRPVLCLAACEMFN-DGDSTPAMPAAVSLEMIHTMSLIHDD 127 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLV---- 136 + +D+ LRRGK +++G ++L GD LLS +F V E TK A L +V Sbjct: 128 LPSMDNDDLRRGKPTCHVIYGEDVAILAGDALLSDSFRHVAEQTKGVAADRVLDVVVRLG 187 Query: 137 ----ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 A LA G++ L T ED + KTA L A+ ++I G + Sbjct: 188 RSVGAKGLAGGQVMDLECEGKGSATLEDLRWIHTHKTATLLQVAVASGAIIGGASAEEVK 247 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 A + + +N+G+AFQ+ DD+LD E+GK G+D K T P +L G + E Sbjct: 248 ACEQFALNIGLAFQVADDILDVTQSTEELGKTAGKDEDTDKTTYPKLLGLD-GAREE 303 >gi|302872147|ref|YP_003840783.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 299 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/246 (34%), Positives = 138/246 (56%), Gaps = 15/246 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVL-LACAIEFIHTATLLHDDV 84 E+I ++Y +F+GGKRLRP+L L + M+ + D +L +A AIE IHT +L+HDD+ Sbjct: 31 EIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDKEIDRKILDIASAIELIHTYSLIHDDL 90 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA--FCM--VIETKSQEAL--EALSLV 136 +D+ LRRGK + +V+G ++L GD LL+ A C+ ++ ++ L A L Sbjct: 91 PAMDNDVLRRGKPTSHVVFGEAIAILAGDALLNLAAEVCLNWILNYGCEKNLVKAAKYLF 150 Query: 137 ACTLAEGELRQLSL---SKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQ 192 + EG + + + D+ E+ L + KT+ L A+ +L+AG ++SV Sbjct: 151 WASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQASCVCGALVAGAEDSVVS 210 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+ YG NLG+AFQ+ DDVLD G+ ++GK+IG+D + K T + + KN+ Sbjct: 211 DLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGKDIKEKKNTFVTFYGLEEAQQLVKNY 270 Query: 253 WKSTIN 258 + I+ Sbjct: 271 SQKAID 276 >gi|257459693|ref|ZP_05624802.1| putative hexaprenyl pyrophosphate synthetase [Campylobacter gracilis RM3268] gi|257443118|gb|EEV18252.1| putative hexaprenyl pyrophosphate synthetase [Campylobacter gracilis RM3268] Length = 330 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 105/333 (31%), Positives = 164/333 (49%), Gaps = 47/333 (14%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHT 76 LI+K +D P + S GK+LR L L A R D L CAI E I Sbjct: 7 LIMKSFIADCGYEPASEMFDRLSPGKKLRSKLLLNIA-----RKDEKSLRLCAIIELIQA 61 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+LLHDDV+D+S++RRGK + +G++ +V++GD L S+A+ + + +S+ A ALSL Sbjct: 62 ASLLHDDVIDESSVRRGKPSINATYGSKNAVMLGDILYSKAYFELSKFESRIAA-ALSLA 120 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL------------FSAAL---EVSS 181 LA GEL +SLS + + YL +I KT+ L F +A E+S Sbjct: 121 VTKLAVGELMDVSLSDDFNDDASKYLQMIYLKTSALIEEVARCGAFLKFGSAENRGEISD 180 Query: 182 LIAGVQN---------------SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 + +G +N S YG NLG+AFQ++DD+LD +GK Sbjct: 181 M-SGKKNEGEIPSAAKDHNKISSASAKFGKYGKNLGLAFQIIDDILDVTQSSEALGKPSL 239 Query: 227 EDFRNGKPTLPVILAFQR--GTKREK--NFWKSTINDGKISVENLKKAFIIMRENRALVD 282 DF GK TLP I + +R+K +F+K + + +IS K + E+ + Sbjct: 240 SDFAEGKTTLPYIYLYGNLDDAQRQKLRSFFKKQLCESEISWIKAK-----LSEHGIIER 294 Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 A +YGQKA +++ + ++ + +++D Sbjct: 295 CINEARAYGQKALEAVAEFKNDKLEQIVRDMID 327 >gi|295693497|ref|YP_003602107.1| polyprenyl synthetase [Lactobacillus crispatus ST1] gi|295031603|emb|CBL51082.1| Polyprenyl synthetase [Lactobacillus crispatus ST1] Length = 329 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 10/302 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVL 66 K +E+VN LI I + + D + + +GGK LRP L + +A + E + Sbjct: 15 KPLEEVNQLIQATIRTPYSDLQDALLEMASNGGKYLRPSLLILSAQIASKKETVSKQIIQ 74 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +IE +H A+L+HDD++DDS RRGK++ + +G T+V GD L + F +++ S Sbjct: 75 LASSIEILHMASLIHDDIIDDSDERRGKISIQARFGKDTAVYAGDLLFTHFFDLILNAIS 134 Query: 127 -QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 Q+ + + L GEL Q++ NL DYL +K KTA LF A E S Sbjct: 135 EQDYMIKNAHTMHHLLAGELGQMAERFNLSQDFNDYLTNVKGKTAALFRLAAEEGSHFGN 194 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 QAL S+G NLGIAFQ+VDD+LDY G + K ED G +LP++LA + Sbjct: 195 GDEQTTQALASFGENLGIAFQIVDDILDYTGG-KHLNKPTLEDLTTGVYSLPILLALSKK 253 Query: 246 TKREK--NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RE+ + K +E ++K I+ + + +T A Y +A +L LP Sbjct: 254 ELREQLVPLLEKKRQMSKNDIEQIQK---ILLNSSVIEETHALAEQYTNRALANLAQLPQ 310 Query: 304 SS 305 ++ Sbjct: 311 TN 312 >gi|195999464|ref|XP_002109600.1| hypothetical protein TRIADDRAFT_20625 [Trichoplax adhaerens] gi|190587724|gb|EDV27766.1| hypothetical protein TRIADDRAFT_20625 [Trichoplax adhaerens] Length = 302 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/229 (33%), Positives = 118/229 (51%), Gaps = 13/229 (5%) Query: 29 MIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGD---------NHVLLACAIEFIHT 76 M+P +V YL GK++RPML TA Y D + E IHT Sbjct: 1 MLPQLREVSNYLFDERGKQIRPMLVYLTARACNYHTDPKKESKLTEGQSAIGVISEMIHT 60 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+L+HDDV+D + +RRGK VWG + ++L GD++LS+A + + +++ + LS V Sbjct: 61 ASLIHDDVIDAAHIRRGKPTINSVWGQKKAILTGDYILSRATVALSKLRNERVVIVLSQV 120 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK- 195 L +GE QL ++ Y+ KTA L + + + +++A N + Sbjct: 121 LDDLVQGEFMQLGSKEDRGERFNHYIKKTFRKTASLMACSCKAVAILADPLNQFLHDVAF 180 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 ++GM+ GI+FQL+DD+LD+ + MGK D R G T PV+ A R Sbjct: 181 NFGMHFGISFQLIDDLLDFIASDDVMGKPTSTDLRLGLATAPVLYACDR 229 >gi|289580127|ref|YP_003478593.1| dimethylallyltranstransferase [Natrialba magadii ATCC 43099] gi|289529680|gb|ADD04031.1| Dimethylallyltranstransferase [Natrialba magadii ATCC 43099] Length = 349 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 95/315 (30%), Positives = 163/315 (51%), Gaps = 39/315 (12%) Query: 35 KYLIFSGGKRLRPMLTLAT--------ALMLEYR------GDNHVLL--ACAIEFIHTAT 78 +YL+ +GGKRLRP + LA L +YR G+ ++ A ++E I + T Sbjct: 43 RYLLDAGGKRLRPAVLLAAAEALADVEPLSTDYRSFPTLSGEEIDMMDAAVSVEVIQSFT 102 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEAL 133 L+HDD++DD LRRG A + +T++L GD L S+AF +++ET + +AL+ L Sbjct: 103 LIHDDIMDDDDLRRGVPAVHREYDLETAILAGDTLYSKAFEIMLETGADPSRMVDALDVL 162 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + + EG+ ++ K +V E+YL +++ KTAVL++A+ + +++ G A Sbjct: 163 ATTCTKICEGQALDVTFEKRDNVAPEEYLEMVEQKTAVLYAASACLPAILQGADQETIDA 222 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-------- 245 L YG+++G AFQ+ DDVLD +++GK G D K TL + A ++G Sbjct: 223 LYGYGLDIGRAFQIQDDVLDLTVPSDKLGKQRGSDLVEEKQTLITVHAREQGVDIEGLVD 282 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T+ ++ I+D +E + R LV ++ K+ L LPD+ Sbjct: 283 TEDVDAVTEAEIDDAVAELEKVGSIDYANETARDLV----------EQGKNRLSVLPDNE 332 Query: 306 WKKSLMEVVDFCLQR 320 ++ L E+ D+ ++R Sbjct: 333 ARELLCEIADYLIER 347 >gi|269797982|ref|YP_003311882.1| polyprenyl synthetase [Veillonella parvula DSM 2008] gi|269094611|gb|ACZ24602.1| Polyprenyl synthetase [Veillonella parvula DSM 2008] Length = 292 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 13/241 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L + E + + + Y + GGKR+RP+LT A ML ++ CA+E IHT + Sbjct: 20 VLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYS 79 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET---KSQEALEAL 133 L+HDD+ +D+ RRG + V+G ++L GD LL+ AF ++ +Q+ L+A+ Sbjct: 80 LVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTSNTVASAQQKLDAI 139 Query: 134 SLVACTLA-EG-----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 VA EG LS K++ + E LH KT LF+A++E+ ++ Sbjct: 140 KCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHT--GKTGALFNASVELGLILGSAN 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + R AL Y LG+ FQ+ DD+LD G + E+GK G D R K T +L ++ Sbjct: 198 KTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHKSTYVSLLGLEQAKH 257 Query: 248 R 248 + Sbjct: 258 Q 258 >gi|163791759|ref|ZP_02186144.1| heptaprenyl diphosphate synthase, component II, putative [Carnobacterium sp. AT7] gi|159872973|gb|EDP67092.1| heptaprenyl diphosphate synthase, component II, putative [Carnobacterium sp. AT7] Length = 326 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 147/292 (50%), Gaps = 17/292 (5%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLLHDDVVDDSALR 91 ++ +GGK +RP TL + G++H A AIE +H ATL+HDDV+DDS R Sbjct: 42 MMHTGGKLVRPAFTL----LFSTFGEDHDPRRARAFAAAIEILHMATLIHDDVIDDSPKR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACTLAEGELRQLSL 150 RG+ + +G +V GD+L + +F ++ + + S + ++ + + GE+ Q+ L Sbjct: 98 RGQSTIQSKYGKDVAVYAGDYLFTVSFKLLTDYSNSMKQMQINTNGMERILMGEIDQMHL 157 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY--GMNLGIAFQLV 208 N +T +YL I KTA LF+ A +L G S R A Y G ++G+AFQ++ Sbjct: 158 RYNQKITVRNYLTQISGKTAQLFALACYSGALEGG--QSERFARNCYYIGSHIGMAFQIM 215 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LDY GK + ED R G + P+I A + K F KI+ E+ Sbjct: 216 DDILDYSQTAESFGKPVLEDVRQGIYSAPLIYAMR---KDHSAFQVLLEKKEKITNEDTT 272 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 K ++ + L + + A Y +KA + LPDS KK + +V L R Sbjct: 273 KVQQLVTDLGGLDEAQQLAGKYTRKALTRINQLPDSPEKKIIRKVTMSLLDR 324 >gi|290975757|ref|XP_002670608.1| predicted protein [Naegleria gruberi] gi|284084169|gb|EFC37864.1| predicted protein [Naegleria gruberi] Length = 437 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 26/306 (8%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL---- 66 D++ + IL + SD ++ KY + GK RPML L T + + + L Sbjct: 121 DLKLIGEEILDSVKSDHPVLDAAAKYFFNTPGKLFRPMLVLMTGRAVNEQTEISDLETIM 180 Query: 67 -----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 LA E IH A+L+HDD+VDD+ RRG A GN+ +VL GDFLL +A + Sbjct: 181 RKQRKLAETTELIHVASLIHDDIVDDADTRRGIPALNKNVGNKVAVLAGDFLLGRASINL 240 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + E+++ +S V LA GE+ Q++ LD + Y+ I KT+ L + + + S+ Sbjct: 241 ARIGNIESIDLISTVIEHLAYGEVLQMAGKGKLDF--DYYMKTIFFKTSSLIANSCKASA 298 Query: 182 LIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK-NIGEDFRNGKPTLPVI 239 +++G N + A ++G ++GIA+QL DD LD+ N++GK + G D + G T P+I Sbjct: 299 VLSGSTNRELIDAAYTFGKHVGIAYQLTDDSLDFTQSQNDLGKPSQGADMKLGLTTCPII 358 Query: 240 LAFQRGTKREKNFWKSTINDGKISVEN---LKKAFII----MRENRALVDTEYR-AYSYG 291 A Q ++ K I D K S E + + F+I ++ + L DT R AY Sbjct: 359 FAAQAFPEQMK-----PIIDRKFSGEGDIEMARNFVIKSNAVQSTKDLADTHTRMAYDAV 413 Query: 292 QKAKDS 297 K K S Sbjct: 414 MKFKPS 419 >gi|302560949|ref|ZP_07313291.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000] gi|302478567|gb|EFL41660.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000] Length = 354 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 94/303 (31%), Positives = 150/303 (49%), Gaps = 10/303 (3%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 R SD + + ++ +L +GGKR+RP+L L A + + A E +H A+L H Sbjct: 56 RDASD-DRVRELTGHLAATGGKRMRPLLVLLAAEFGDPGSEGVAQAAVVAELVHLASLYH 114 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-- 139 DDVVD +A+R G +A +WGN+ + G++LL++ + + +AL+L A T Sbjct: 115 DDVVDRAAVRHGAASANALWGNRAAAQGGNWLLARGARLSADLVP----DALALNARTAN 170 Query: 140 -LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + EG+L +L + Y V KTA L + +L V + AG + AL YG Sbjct: 171 RIVEGQLLELVGPEPGADPVAHYFRVAAGKTAALLAMSLGVGAFQAGAPRAAADALVEYG 230 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 LG+AFQ+ DD+LD R GK G D G P+LPV+LA + GT + + Sbjct: 231 EQLGLAFQIADDLLDLRSSEAASGKEQGRDLLAGVPSLPVLLA-REGTDAGDAELRELLA 289 Query: 259 DGKISVENLK-KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 G + E+ +A + ++RA E + +A+ +L LP +++L + DF Sbjct: 290 AGPGAGEDWHGRALKLFSDSRAAARAETLMHQRLGRARAALGVLPPLPARRTLDALCDFV 349 Query: 318 LQR 320 R Sbjct: 350 ALR 352 >gi|328468126|gb|EGF39132.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes 1816] Length = 302 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 115/216 (53%), Gaps = 10/216 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 VK LI +GGK LRP L +A +Y + V +A A+E +H ATL+HDDVVDDS LRR Sbjct: 15 VKDLIHAGGKLLRPAFALLSAQAGPDYDKERAVSIAAALEVLHMATLIHDDVVDDSPLRR 74 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLS 149 G +G +V GD+L C I + ++E + + + + GEL Q+ Sbjct: 75 GIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHASSVENIEFNSKNIEKILMGELDQMR 132 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY--GMNLGIAFQL 207 S ++VT +YL I KTA LF AL S G + + K Y G LG+AFQ+ Sbjct: 133 TSYKMNVTVREYLTRISGKTAQLF--ALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQI 190 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +DDVLDY +GK + D + G +LP+I A + Sbjct: 191 IDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 226 >gi|126341457|ref|XP_001376077.1| PREDICTED: similar to PDSS1 protein [Monodelphis domestica] Length = 412 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/296 (28%), Positives = 141/296 (47%), Gaps = 12/296 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHTATLLHDDV 84 ++ +Y GK RP++ + A +N +A E IHTA+L+HDD+ Sbjct: 120 EMCEYYFDGRGKAFRPIVVVLMARACNVHHNNCRDMQASQRSIALIAEMIHTASLVHDDI 179 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +DD++ RRGK +WG + +VL GDF+LS A + + + L+ V L GE Sbjct: 180 IDDASSRRGKHTVNQIWGEKKAVLAGDFILSAASVALARIGNTTIVSVLTQVIEDLVRGE 239 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 QL +N + Y+ KTA L + + + S++ V + YG N+GIA Sbjct: 240 FLQLGSKENENERFAHYIEKTFKKTASLLANSCKAVSILGCPDPVVHEIAYQYGKNIGIA 299 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQL+DDVLD+ +++GK D + G T PV+ A Q+ + + G Sbjct: 300 FQLIDDVLDFTSCTDQLGKPTAADLKLGLATGPVLFACQQFPEMNAMIMRRFNLPG---- 355 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++++A + ++ + T Y A Y KA + L S + +L+++ + L R Sbjct: 356 -DVERAQQYVLQSDGVQQTTYLAQQYCHKAIREISKLRPSPERDALIQLTEIVLTR 410 >gi|254574320|ref|XP_002494269.1| Hexaprenyl pyrophosphate synthetase [Pichia pastoris GS115] gi|238034068|emb|CAY72090.1| Hexaprenyl pyrophosphate synthetase [Pichia pastoris GS115] gi|328353910|emb|CCA40307.1| hexaprenyl pyrophosphate synthetase,mitochondrial precursor [Pichia pastoris CBS 7435] Length = 489 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 91/304 (29%), Positives = 137/304 (45%), Gaps = 59/304 (19%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + + N+ ++L GDFLL +A + ++ Sbjct: 193 LAEVVEMIHTASLLHDDVIDFSDSRRGRPSGNVAFTNKMAILAGDFLLGRASVELGRLRN 252 Query: 127 QEALEALSLVACTLAEGELRQL-------------------------------------- 148 E +E +S L EGE QL Sbjct: 253 SEVVELMSTSIANLVEGEFMQLKNTVLQPDITMVEGNPTPIPEATGKVPTEISEYSVPGA 312 Query: 149 --------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + +N++ + YLH KTA L S + ++++AG Q V +G N Sbjct: 313 IVDGKRIITHEENVNAAFDYYLHKTYLKTAALISKSSRSTAILAGCQEEVINNCYRFGRN 372 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR----GTKREKNFWKST 256 LG+ FQ+VDD+LDY ++GK G D + G T P++ A++ G +NF K Sbjct: 373 LGLCFQIVDDMLDYTTTAEQLGKPAGADLQLGLATAPILYAWKNDPSLGPLIARNFSKPG 432 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 VE K A I +N + T A Y +A ++LR LP+S + L V + Sbjct: 433 ------DVETAKTAVI---KNDGVEKTRVLASKYRDQALEALRTLPESGARSVLEFVTNS 483 Query: 317 CLQR 320 L R Sbjct: 484 VLTR 487 >gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522] gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522] Length = 295 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 85/244 (34%), Positives = 132/244 (54%), Gaps = 32/244 (13%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDV-- 84 D + Y + +GGKR+RPML LAT RG N L +ACAIE IHT +L+HDD+ Sbjct: 36 DAMIYSLKAGGKRIRPMLLLAT-----LRGYNKPLSHGYDVACAIEMIHTYSLIHDDLPA 90 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-------------KSQEALE 131 +D+ LRRGK V+G ++L GD LL+ +F ++ + K +A Sbjct: 91 MDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYSFQLISSSMLLPDNVKLLLIQKMSQAAG 150 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +V + + + ++LS +D ++ + H KT L + ++E +++AGV + R Sbjct: 151 PEGMVGGQVLDMQGEGITLS--VDQLQKIHHH----KTGDLLAVSVESGAILAGVSENER 204 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +L S+ +LGIAFQ+ DD+LD G+ + +GK IG D N K T P +L G K++ Sbjct: 205 ISLTSFAKHLGIAFQIKDDILDVEGDESSIGKPIGSDEENDKNTYPKLLGLD-GAKQKLA 263 Query: 252 FWKS 255 F S Sbjct: 264 FHIS 267 >gi|299738690|ref|XP_001834728.2| decaprenyl-diphosphate synthase subunit 1 [Coprinopsis cinerea okayama7#130] gi|298403425|gb|EAU87176.2| decaprenyl-diphosphate synthase subunit 1 [Coprinopsis cinerea okayama7#130] Length = 505 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 19/265 (7%) Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 V LA +E +HTA+LLHDDV+D+SALRRG +A +GN+ SVL G+F+L +A + Sbjct: 194 TQVRLAQIVEMLHTASLLHDDVIDESALRRGAASAPSAFGNKQSVLGGNFVLGRASAALS 253 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED-----------YLHVIKSKTAV 171 E + ++ V L EGE+ QL LD + E YLH KTA Sbjct: 254 RLGDPEVTQLIAGVLSNLVEGEILQLK-EIQLDGSPETASQRRQDAWNIYLHKTYLKTAS 312 Query: 172 LFSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 L + + ++ G + ++ +YG NLGIAFQLVDDVLDY +GK G D Sbjct: 313 LMAKGARSAVVLGGCKEGEIWKEIAYAYGRNLGIAFQLVDDVLDYESASATLGKPGGADL 372 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289 G T P + A++ + + + G ++++A ++ + + T+ A Sbjct: 373 ELGLATGPALYAWEEYPEIGELICRKFEQPG-----DVERARDLVLRSSGVERTKALAQE 427 Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVV 314 Y KA++ L+ +PDS K +L V Sbjct: 428 YASKAREVLQEIPDSDAKAALENCV 452 >gi|164605006|dbj|BAF98299.1| geranyl-diphosphate synthase [Hevea brasiliensis] Length = 328 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 83/228 (36%), Positives = 117/228 (51%), Gaps = 16/228 (7%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALML----EYRGDN--------HVL 66 + S+V + +Y G GKRLRP +L +ATAL + + GD Sbjct: 96 LVSEVPKLASAAEYFFKMGVEGKRLRPTVLLLMATALNVHIPEQIVGDTLAAELRTRQQC 155 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A E IH A+LLHDDV+DD+ RR + V GN+ +VL GDFLLS+A V K+ Sbjct: 156 IAEITEMIHVASLLHDDVLDDAETRRSISSLNFVMGNKVAVLAGDFLLSRACVAVASLKN 215 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E + L++ L GE Q++ + + E Y+ KTA L S + + +L+AG Sbjct: 216 TEVVSLLAIAVEHLVTGETMQMTCTSEQRCSMEYYMKKTYYKTASLISNSCKAIALLAGQ 275 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 V YG NLG+AFQL+DDVLD+ G +GK D R+ P Sbjct: 276 TTEVATLAFEYGKNLGLAFQLIDDVLDFTGTFASLGKGSLSDIRHVIP 323 >gi|190150135|ref|YP_001968660.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263471|ref|ZP_07545086.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915266|gb|ACE61518.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871114|gb|EFN02843.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 297 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 87/266 (32%), Positives = 144/266 (54%), Gaps = 24/266 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y + GGKR+RP L AT ML+ + A A+E IH +L+HDD+ +DD Sbjct: 36 EAMSYAVLLGGKRVRPFLIYATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLPAMDDDK 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACTLAEGEL 145 LRRGK + + T++L GD L S AF ++ + T SQ+ + SL A G Sbjct: 96 LRRGKPTCHIAFDEATAILAGDALQSFAFELIAQDESLTDSQKVRQIQSLAQAAGARG-- 153 Query: 146 RQLSLSKNLDVTEEDY------LHVI-KSKTAVLFSAALEVS-SLIAGVQN-SVRQALKS 196 + L ++LD+ ED L +I ++KT+ L A++ + +L A QN +++Q L+ Sbjct: 154 --MCLGQSLDLLAEDTAVNLAELELIHRNKTSALIIASVLMGFNLSAHSQNLAIKQPLER 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y +G+AFQ+ DD+LD GE +++GK +G D K T P +L + ++ ++ +++ Sbjct: 212 YAQAIGLAFQVQDDILDVIGETDKIGKTVGSDENLHKSTYPKLLGLEGAQQKAQDLYQTA 271 Query: 257 IN---DGKISVENLKK--AFIIMREN 277 +N + LK+ FI+ REN Sbjct: 272 LNALEELPFDTTALKELAHFIVKREN 297 >gi|299783324|gb|ADJ41322.1| Trans-hexaprenyltranstransferase [Lactobacillus fermentum CECT 5716] Length = 328 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 13/313 (4%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML-----TLATALMLEYRGDNHVLLAC 69 V+ L+ RI + + ++ + +GGK LRP +L E R D + LA Sbjct: 20 VSDLMAARIKTKDGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQR-DRLIKLAT 78 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +IE +H ATL+HDD++DDS RRG+++ + +G +V GD+L + F ++ T + Sbjct: 79 SIEVLHMATLIHDDIIDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDLITTTTATTP 138 Query: 130 LEALSL-VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + + GEL Q++ D T YL I KTA LFS A + G Sbjct: 139 FLTTNAQIMHRILSGELGQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGADQ 198 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 K G N+GIAFQ++DD+LDY +++ K + ED G +LP++LA Q + Sbjct: 199 RTVALAKRIGQNVGIAFQILDDILDY-SSGDQLNKPVLEDLATGVYSLPLLLAMQANSAA 257 Query: 249 EKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 +K ++ G++ E +++ ++ EN + A ++ +KA+ + LP S + Sbjct: 258 ----FKPLLDKGRLMSEADMQLVRQLVLENGGVEQARQLATAFTKKAEAEINQLPAGSSR 313 Query: 308 KSLMEVVDFCLQR 320 ++L ++ L+R Sbjct: 314 RALTKLCQRLLKR 326 >gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797] gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797] Length = 298 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 80/236 (33%), Positives = 129/236 (54%), Gaps = 15/236 (6%) Query: 31 PDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 P ++K Y + +GGKRLRP+L L + + ACAIE +HT +L+HDD+ Sbjct: 34 PPILKAAMSYSLSAGGKRLRPILVLLSCEACGGDQSTALPAACAIEMVHTYSLIHDDLPA 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---IETKSQEALEALSLV----A 137 +DD LRRG + + +G ++L GD LL++AF ++ IE KS A + L A Sbjct: 94 MDDDELRRGLPTSHIKFGEANAILAGDALLTRAFELLANQIEVKSCAAACCVDLANAAGA 153 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + G++ L S++L+ + L I K KT L +AL + + I G + + L+ Sbjct: 154 VGMVGGQVADLE-SEHLENPTLEILEAIHKRKTGRLICSALTMGARIGGADPATLKNLER 212 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 YG +G+AFQ+ DD+LD G+ +MGK + +D +GK T P ++ + +R +N Sbjct: 213 YGTCIGLAFQITDDLLDLTGDEEKMGKGVRKDADHGKLTYPSLIGVEESRRRSQNL 268 >gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514] gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561] gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513] gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514] gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561] gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513] Length = 294 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 81/242 (33%), Positives = 132/242 (54%), Gaps = 19/242 (7%) Query: 20 LKRICSDVEMIPDVV----KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L RI D+E P+++ +Y +F+GGKRLRP+L L++ +L + +ACAIE IH Sbjct: 17 LHRIL-DIEEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIH 75 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA---- 129 T +L+HDD+ +D+ LRRGK V+G ++L GD LL+ + +++ + Sbjct: 76 TYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDYE 135 Query: 130 --LEALSLVACT-----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 L+A + +A + G++ + LS+N +T E+ + + KTA L A++ + Sbjct: 136 RILKATNEIATASGCKGIIGGQVVDI-LSQNTKLTYEELKFIHEHKTAALIEASVCAGAY 194 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 IAG AL+ Y +G AFQ+ DD+LD GE ++GK +G D GK T I Sbjct: 195 IAGATEEDVHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDREKGKFTFVNIFEL 254 Query: 243 QR 244 ++ Sbjct: 255 EK 256 >gi|190346389|gb|EDK38464.2| hypothetical protein PGUG_02562 [Meyerozyma guilliermondii ATCC 6260] Length = 475 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 96/319 (30%), Positives = 140/319 (43%), Gaps = 66/319 (20%) Query: 56 MLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110 + E+ N +L LA +E IHTA+LLHDDV+D S RRG+ + + + N+ +VL G Sbjct: 167 LPEFDASNGILPKQRRLAEIVEMIHTASLLHDDVIDMSDARRGRPSGNVAFTNKMAVLAG 226 Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL---------------------- 148 DFLL +A + ++ E +E LS L EGE QL Sbjct: 227 DFLLGRASVAIARLRNPEVIELLSTTIANLVEGEFMQLKNTVLNQSSDINNGGESKPVPT 286 Query: 149 ------------SLSKNLDVTEED--------YLHVIKSKTAVLFSAALEVSSLIAGVQN 188 S+ DV E YLH KTA L S + +++++G Q+ Sbjct: 287 PTGKVPTKQHEYSVQTPADVDHETNVNAAFEYYLHKTYLKTASLMSKSARAAAVLSGAQD 346 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 V Q +G NLG+ FQ+VDD+LDY N +GK D + G T P++ A Sbjct: 347 DVVQNCYDFGRNLGLCFQIVDDMLDYTSSDNAIGKPSQADLKLGLATAPILFA------- 399 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVD-------TEYRAYSYGQKAKDSLRCL 301 WK G++ K+ + R+ VD T A Y KA +LR L Sbjct: 400 ----WKERPELGELISRKFKEPGDV-ELARSAVDQCNGVEQTRKMAQEYCMKALGNLRVL 454 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S + +L + + L R Sbjct: 455 PESDARSALELLTNSILTR 473 >gi|294793724|ref|ZP_06758861.1| geranyltranstransferase [Veillonella sp. 3_1_44] gi|294455294|gb|EFG23666.1| geranyltranstransferase [Veillonella sp. 3_1_44] Length = 292 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 13/241 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L + E + + + Y + GGKR+RP+LT A ML ++ CA+E IHT + Sbjct: 20 VLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYS 79 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET---KSQEALEAL 133 L+HDD+ +D+ RRG + V+G ++L GD LL+ AF ++ +Q+ L+A+ Sbjct: 80 LVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTSNTVASAQQKLDAI 139 Query: 134 SLVACTLA-EG-----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 VA EG LS K++ + E LH KT LF+A++E+ ++ Sbjct: 140 QCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHT--GKTGALFNASVELGLILGCAN 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 N+ R L Y LG+ FQ+ DD+LD G + E+GK G D R K T +L ++ Sbjct: 198 NTTRTFLMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHKSTYVSLLGLEQAKH 257 Query: 248 R 248 + Sbjct: 258 Q 258 >gi|146417731|ref|XP_001484833.1| hypothetical protein PGUG_02562 [Meyerozyma guilliermondii ATCC 6260] Length = 475 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 94/316 (29%), Positives = 138/316 (43%), Gaps = 64/316 (20%) Query: 58 EYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112 E+ N +L LA +E IHTA+LLHDDV+D S RRG+ + + + N+ +VL GDF Sbjct: 169 EFDASNGILPKQRRLAEIVEMIHTASLLHDDVIDMSDARRGRPSGNVAFTNKMAVLAGDF 228 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL------------------------ 148 LL +A + ++ E +E LS L EGE QL Sbjct: 229 LLGRASVAIARLRNPEVIELLSTTIANLVEGEFMQLKNTVLNQSSDINNGGELKPVPTPT 288 Query: 149 ----------SLSKNLDVTEED--------YLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 S+ DV E YLH KTA L S +++++G Q+ V Sbjct: 289 GKVPTKQHEYSVQTPADVDHETNVNAAFEYYLHKTYLKTASLMSKLARAAAVLSGAQDDV 348 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 Q +G NLG+ FQ+VDD+LDY N +GK D + G T P++ A Sbjct: 349 VQNCYDFGRNLGLCFQIVDDMLDYTSSDNAIGKPSQADLKLGLATAPILFA--------- 399 Query: 251 NFWKSTINDGKISVENLKK------AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 WK G++ K+ A + + + + T A Y KA +LR LP+S Sbjct: 400 --WKERPELGELISRKFKEPGDVELARLAVDQCNGVEQTRKMAQEYCMKALGNLRVLPES 457 Query: 305 SWKKSLMEVVDFCLQR 320 + +L + + L R Sbjct: 458 DARSALELLTNSILTR 473 >gi|256372659|ref|YP_003110483.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331] gi|256009243|gb|ACU54810.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331] Length = 338 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 87/237 (36%), Positives = 131/237 (55%), Gaps = 10/237 (4%) Query: 20 LKRICSDVEMIPDVVK---YLIFSGGKRLRPMLTLATAL----MLEYRGDNHVLLACAIE 72 L+R + + PD+ +LI +GGKR+RP++ LATAL + D V A A+E Sbjct: 23 LRRAATTTD--PDITAAALHLIMAGGKRVRPLIALATALALGEVAPSPDDPVVRGAVAVE 80 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 +H A+L HDDV+D+++ RRG +A +GN +V+ GDFLL++A + +E A Sbjct: 81 LVHLASLYHDDVMDEASERRGVSSANARFGNLIAVVTGDFLLARAAGIAARL-GEEVAAA 139 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L+ + EG++ +++ + L T E YL I KTA L A + +++ G ++ Sbjct: 140 LADTLAAMCEGQILEVADAHQLTRTTERYLATIAGKTASLMGTAARIPAIVLGRDQAMLD 199 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL + G LG+ FQL DDVLD ++GK +D G TLPVILA T RE Sbjct: 200 ALSAAGTALGMLFQLRDDVLDLVATREQLGKEPAQDLVEGIYTLPVILALHDPTVRE 256 >gi|88801902|ref|ZP_01117430.1| putative isoprenoid biosynthesis related protein [Polaribacter irgensii 23-P] gi|88782560|gb|EAR13737.1| putative isoprenoid biosynthesis related protein [Polaribacter irgensii 23-P] Length = 340 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 82/291 (28%), Positives = 146/291 (50%), Gaps = 8/291 (2%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D+ E + +L K + + + + + Y++ GGKR+RP+LTL + + + Sbjct: 19 DIAHYQKEFLTYLESKNWIHEPKNLYEPIDYILKLGGKRIRPVLTLMVSDIFSGDFKKAL 78 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A A+E H TL+HDD++D + LRRGK W +L GD +L A+ Sbjct: 79 PAALAVEVFHNFTLVHDDIMDAAPLRRGKPTVHEKWDTNRGILSGDAMLILAYQYFENYD 138 Query: 126 SQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 S L+ L + T E G+ + +VT +Y+++I+ KT+VL +AAL++ ++ Sbjct: 139 SIVFLKLAKLFSKTALEVCDGQQLDVDFETRSNVTIPEYINMIRLKTSVLVAAALKMGAI 198 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +A + Q + +G+NLG+AFQL DD LD G+ GK +G D K T + A Sbjct: 199 VAETSDENAQLIYDFGLNLGLAFQLQDDYLDTFGDPKTFGKQVGGDIIENKKTYLYLKAL 258 Query: 243 QRGTKRE----KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289 + K + ++F+K + + + + +++ F M + L+ E +Y+ Sbjct: 259 EVSGKEDIGKLRHFYKKKLKENAVKIGAVRRIF-EMNDIPYLIKQEIESYT 308 >gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21] gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21] Length = 292 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 80/231 (34%), Positives = 125/231 (54%), Gaps = 13/231 (5%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 FL ++ + + + + Y +GGKRLRP+L +A A + +G + + LA A+E IH Sbjct: 17 GFLKIRIGVGAISRVDEAMAYSALAGGKRLRPILLMAAADAVGGKGTDFLPLASALEMIH 76 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA---L 130 T +L+HDD+ +D+ RRG++ V+G +VL GD LL+QAF ++ E K + + Sbjct: 77 TYSLIHDDLPEMDNDDYRRGRLTNHKVFGQAMAVLAGDGLLTQAFEVMTEQKGVDPALMV 136 Query: 131 EALSLVA-CTLAEGELRQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 E + L+A C EG + +L K+L+ E LH ++KT LF AA+ +L+ Sbjct: 137 EIIHLIARCAGPEGMVGGQALDINAEEKHLEPAEMKQLH--EAKTGALFIAAIRSGALLG 194 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 G AL + G+AFQ+ DD+LD G+ MGK G D + K T Sbjct: 195 GGSKDEVNALTKFATFFGLAFQITDDILDVEGDSKIMGKMAGMDEKMHKST 245 >gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps) [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps) [Thermodesulfovibrio yellowstonii DSM 11347] Length = 295 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 127/233 (54%), Gaps = 18/233 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D V Y + +GGKRLRP+L +A+ + +N V A AIEFIHT +L+HDD+ +D+ Sbjct: 35 DSVLYSLTAGGKRLRPILCIASYEACDGM-ENIVPYATAIEFIHTYSLIHDDLPAMDNDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELR 146 LRRGK V+G ++L GD LL++AF ++ K + + L +++ LR Sbjct: 94 LRRGKPTNHKVFGEGIAILAGDGLLTEAFT-ILSNKDYANISSNTLLKVISEISKAAGLR 152 Query: 147 QLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + + D+ E +++H+ K TA + A+++V +++A + L+ Y Sbjct: 153 GMVAGQAYDLISEGKEPDERVVEFIHLYK--TAAMIKASVKVGAILAEASEEKIKNLEIY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 G ++G+AFQ+VDD+LD G MGK G D GK T P + ++ ++ K Sbjct: 211 GQSIGLAFQIVDDILDIEGTTEAMGKPKGSDIEKGKMTYPRVFGIEKSKQKAK 263 >gi|268318920|ref|YP_003292576.1| hypothetical protein FI9785_426 [Lactobacillus johnsonii FI9785] gi|262397295|emb|CAX66309.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785] Length = 350 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 93/322 (28%), Positives = 169/322 (52%), Gaps = 15/322 (4%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP---MLTLATALMLEYRGDNH 64 T KDM +N +ILK + + ++ D +K S GK LRP ML + + + Sbjct: 33 TQKDMIAINRIILKHVNTVPGLLGDALKDTFASPGKMLRPACVMLFGSFGPNANQKREEL 92 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L A + + + Sbjct: 93 QKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLF--ALSLTLLS 150 Query: 125 KSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++ ++L ++ T+ GE Q + + N++++E++YL IK KT VLF A + + Sbjct: 151 ENAQSLHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFGLACFIGA 210 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +G++ + K +G LG AFQL DD+LDY + + K + D ++G + P+I A Sbjct: 211 YESGLKVTRALKAKKFGEYLGQAFQLRDDILDYTTTSSTLKKPVLLDVKDGIYSGPLIFA 270 Query: 242 FQR-GTKREKNFWKSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL- 298 Q T R K GK ++ E L++ ++ + + + A + KA +L Sbjct: 271 LQNDSTGRLHELVKL----GKDLTKEQLQEIEKMVNDLGGVKRAQKLADKFTDKALHNLQ 326 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 + PD+ ++ L E+ + L+R Sbjct: 327 KHWPDNKTRQQLEELTNILLKR 348 >gi|229495533|ref|ZP_04389266.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406] gi|229317516|gb|EEN83416.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406] Length = 334 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 88/255 (34%), Positives = 124/255 (48%), Gaps = 19/255 (7%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y GGKR+RP+L L A M + + A A+E H TLLHDDV+D S +RR + Sbjct: 41 YAFEGGGKRVRPLLVLMVADMYGKDRADFIKAALALEIYHNFTLLHDDVMDHSEMRRNRP 100 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETK---SQEALEALSLVACTLAEGELRQLSLSK 152 + +G ++L GD +LS A+ + E + + ++ + G+ + Sbjct: 101 SVPAQFGIAQAILTGDAMLSLAYKLTQEYPLALQPAIMGVFNRMSQDIMVGQQMDMDFET 160 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 DVT +Y +I+ KTAVL SAALE+ + IA R L G+N G+AFQL DD L Sbjct: 161 RSDVTLAEYERMIRKKTAVLLSAALEIGAYIADTGMRDRSYLIRAGINAGMAFQLRDDYL 220 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 D G+ GK IG D K T +I A + RE+ W E LK A Sbjct: 221 DVYGDEATFGKPIGGDIAENKQTWLLIKA--QEIARERGEW-----------EQLKAALA 267 Query: 273 IMRENRALVDTEYRA 287 I +E R + +YRA Sbjct: 268 IPKEQR---EEKYRA 279 >gi|306835165|ref|ZP_07468202.1| trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC 49726] gi|304568954|gb|EFM44482.1| trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC 49726] Length = 334 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 93/319 (29%), Positives = 158/319 (49%), Gaps = 18/319 (5%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACA 70 ME V + + + D V +L +GGKR RPM+ L + G V+ A Sbjct: 26 MEAVEEKLRSETDRGQDFLKDKVSHLSKAGGKRFRPMMALLASEYGAKPGCEEVIKSATV 85 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A ++ SQ Sbjct: 86 VEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGDALLAHASRLM----SQLDT 141 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + A T E G++R+ + + + Y+ VI+ KTAVL ++A + + +G Sbjct: 142 HTVGHFADTFEELVTGQMRETIGAGEANPVDH-YMAVIQEKTAVLIASAGYLGAYHSGAS 200 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 AL G +G+ FQ+VDDV+D + + GK G D R G TLPV+ A + + Sbjct: 201 ADHAAALYRIGGAIGMIFQIVDDVIDIFSDPKDSGKTPGTDLREGVFTLPVLYALEEDGE 260 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMREN----RALVDTEYRAYSYGQKAKDSLRCLPD 303 + + E +++A ++R++ RAL D +Y + ++ L LP+ Sbjct: 261 VGDQLRELLTGPLETDAE-VERAIELLRQSGGRQRALEDIN----AYLRTVEEQLSVLPE 315 Query: 304 SSWKKSLMEVVDFCLQRLN 322 +S ++L ++ D+ ++R+ Sbjct: 316 NSASQALRQLADYTVRRVG 334 >gi|253574559|ref|ZP_04851900.1| heptaprenyl diphosphate synthasecomponent II [Paenibacillus sp. oral taxon 786 str. D14] gi|251846264|gb|EES74271.1| heptaprenyl diphosphate synthasecomponent II [Paenibacillus sp. oral taxon 786 str. D14] Length = 326 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 90/254 (35%), Positives = 140/254 (55%), Gaps = 8/254 (3%) Query: 1 MKMLEDLTLK----DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MK+ E L + D E N + R + + LI SGGKR+RP++ + + Sbjct: 1 MKLEETLNIPLRTVDRELENMVKYDRDVPRSSQLAKAIVELIRSGGKRIRPLMVIVGSRF 60 Query: 57 LEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 + V LA A EFIH A+L+HDD++DDS +RRG+ A + G ++ VG+++ + Sbjct: 61 GPDPDEKKVWRLAAAAEFIHAASLIHDDIIDDSPMRRGQKAMHIKLGVSGALHVGNYMSA 120 Query: 116 QAFCM--VIETKSQEALEALSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 + + V + ++ + LS +A T L GE +QLS + DVT ++YL K+KTA L Sbjct: 121 RVIELISVYSAEREKFVYDLSSLATTKLCLGEYQQLSHLFDYDVTIDEYLEKSKNKTAQL 180 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + L++ + AG + L S+G LG++FQ+ DDVLDY ++GK G D R+G Sbjct: 181 MATCLQIGAKAAGADTETAELLYSFGEKLGMSFQIRDDVLDYTQSAEKLGKPAGSDLRSG 240 Query: 233 KPTLPVILAFQRGT 246 + TLPV+ A Q T Sbjct: 241 QVTLPVLFALQDET 254 >gi|255718931|ref|XP_002555746.1| KLTH0G16368p [Lachancea thermotolerans] gi|238937130|emb|CAR25309.1| KLTH0G16368p [Lachancea thermotolerans] Length = 470 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 101/336 (30%), Positives = 153/336 (45%), Gaps = 62/336 (18%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRR 92 I G K L P+ L ++ + +L LA +E IHTA+LLHDDV+D S RR Sbjct: 142 ILHGIKPLNPLTKGPEPLPEDFDRERGILPKQRRLAEIVEMIHTASLLHDDVIDHSDTRR 201 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL---- 148 G+ + + + N+ +VL GDFLL +A + ++ E +E +S L EGE QL Sbjct: 202 GRASGNVAFTNKMAVLAGDFLLGRATVSISRLRNPEVVELISNSIANLVEGEFMQLKNTA 261 Query: 149 ----------------SLSKNLDVTEEDY-----------------------LHVIKSKT 169 S L DY LH KT Sbjct: 262 VDSDLTTVANGTQKIPPPSPKLTNPTHDYRVPVERGAVFSQEIVIDTAFDYYLHKTYLKT 321 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 A L S + +++++G Q +V ++G NLGI FQLVDD+LD+ E+GK G D Sbjct: 322 ASLISKSCRAAAILSGAQETVVDECYNFGKNLGICFQLVDDMLDFTISAKELGKPAGADL 381 Query: 230 RNGKPTLPVILAFQR----GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 + G T PV+ A++ G ++NF S D + + E + K + +++ R L Sbjct: 382 QLGIATAPVLYAWKEDHSLGPLIQRNF--SLPGDVERTAEAVAK-YEGVKKTREL----- 433 Query: 286 RAYSYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQR 320 AY Y +A +LR LP+S + +L + + L R Sbjct: 434 -AYEYRDRALANLRAALPESDARSALEFLTNSILTR 468 >gi|116334218|ref|YP_795745.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC 367] gi|116099565|gb|ABJ64714.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC 367] Length = 325 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 85/304 (27%), Positives = 154/304 (50%), Gaps = 5/304 (1%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLACAIEFIHTA 77 +L+ + D + I + L+ SGGK LRP L + A AIE +H Sbjct: 23 LLRTVQLDNQPIHHKILALLKSGGKLLRPGYFYLFSTFGNATTPAQLQAGAAAIEILHVG 82 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 TL+HDDV+DDS RRG ++ +G + ++ GDF+ + F V+++ + +L + A Sbjct: 83 TLIHDDVIDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLQSTTDRSLIQNHIDA 142 Query: 138 CT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + +GEL Q+ L+ D+T + YL+ I KTA LF+ + + +AG SV + Sbjct: 143 MRRILQGELHQMDLNYREDITLDAYLNEIAGKTAELFALSCYQGAQLAGAPQSVIDHTRE 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 G+ +G A+Q++DD+LDY G+ + K + ED R+G + + + ++F K Sbjct: 203 IGIAIGCAYQMLDDILDYAGDPKKTQKPVLEDLRSG---VYSLPLLLSLSHAPRDFHKLL 259 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 +++E++K ++ + + + A Y +A ++ LP S ++SL ++ Sbjct: 260 KKKQAMTLEDIKHVQALVAQYDGVGAAKQLARDYTDRALTLIQQLPAGSAQQSLEQLTRL 319 Query: 317 CLQR 320 L+R Sbjct: 320 LLRR 323 >gi|28211243|ref|NP_782187.1| geranylgeranyl pyrophosphate synthase [Clostridium tetani E88] gi|28203683|gb|AAO36124.1| geranyltranstransferase [Clostridium tetani E88] Length = 288 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/238 (31%), Positives = 126/238 (52%), Gaps = 12/238 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV-VDDS 88 + + + Y + GGKR+RP+L L T + + +ACAIE IHT +L+HDD+ D Sbjct: 28 VYEAMSYSVNIGGKRIRPILALITYKIYNKNYKEALSIACAIEMIHTYSLIHDDLPCMDD 87 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----ALSLVACTLAEGE 144 LRRGK V+G+ +VL GD LL++AF ++++ Q+ + + + EG Sbjct: 88 DLRRGKPTNHKVFGDGLAVLAGDGLLNEAFNIILKNGCQKGMTWVEAGYEIGKASGVEGM 147 Query: 145 LRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + L+ +K++++ E DY+H + KTA L +A++ +++ LK +G Sbjct: 148 IGGQVVDVLNTNKSIEIEELDYIH--EKKTAALITASIMTGAILGEANEKDTTILKEFGK 205 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 LG+AFQ+ DD+LD + ++GK IG+D K T ++ K K+ S I Sbjct: 206 KLGLAFQIKDDILDIESDTRKLGKTIGKDKEQNKNTFVKFYGLEKCKKMCKDLTSSCI 263 >gi|46143506|ref|ZP_00135080.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208283|ref|YP_001053508.1| geranyltranstransferase [Actinobacillus pleuropneumoniae L20] gi|303251195|ref|ZP_07337374.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307245667|ref|ZP_07527753.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307250028|ref|ZP_07531996.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252381|ref|ZP_07534278.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254629|ref|ZP_07536460.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259080|ref|ZP_07540810.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|126097075|gb|ABN73903.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302649929|gb|EFL80106.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306853369|gb|EFM85588.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306857950|gb|EFM90038.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860303|gb|EFM92319.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862424|gb|EFM94387.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866747|gb|EFM98605.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 297 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 87/266 (32%), Positives = 143/266 (53%), Gaps = 24/266 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y + GGKR+RP L AT ML+ + A A+E IH +L+HDD+ +DD Sbjct: 36 EAMSYAVLLGGKRVRPFLIYATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLPAMDDDK 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACTLAEGEL 145 LRRGK + + T++L GD L S AF ++ + T SQ+ + SL A G Sbjct: 96 LRRGKPTCHIAFDEATAILAGDALQSFAFELIAQDESLTDSQKVRQIQSLAQAAGARG-- 153 Query: 146 RQLSLSKNLDVTEEDY------LHVI-KSKTAVLFSAALEVS-SLIAGVQN-SVRQALKS 196 + L ++LD+ ED L +I ++KT L A++ + +L A QN +++Q L+ Sbjct: 154 --MCLGQSLDLLAEDTAVNLAELELIHRNKTGALIIASVLMGFNLSAHSQNLAIKQPLER 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y +G+AFQ+ DD+LD GE +++GK +G D K T P +L + ++ ++ +++ Sbjct: 212 YAQAIGLAFQVQDDILDVIGETDKIGKTVGSDENLHKSTYPKLLGLEGAQQKAQDLYQTA 271 Query: 257 IN---DGKISVENLKK--AFIIMREN 277 +N + LK+ FI+ REN Sbjct: 272 LNALEELPFDTTALKELAHFIVKREN 297 >gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916] gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916] Length = 317 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 86/257 (33%), Positives = 136/257 (52%), Gaps = 24/257 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDV 84 E + + ++Y + +GGKRLRP+L LA E G + L A A+E IHT +L+HDD+ Sbjct: 47 ESLREAMRYSLLAGGKRLRPILCLAAC---ELAGGDPALAMPTAVALEMIHTMSLIHDDL 103 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEA------LEALSL 135 +D+ LRRG+ V+G+ ++L GD LL++AF MV + + A + LSL Sbjct: 104 PAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFEMVSLRSPGVPAERLLKVVAELSL 163 Query: 136 VACT--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 VA L G++ L K++D+ +Y+H+ KT L A + +LI G + Sbjct: 164 VAGAPGLVGGQVVDLECEGKDVDLDTLEYIHL--HKTGALLKACVITGALIGGADEAQLD 221 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +L++Y +G+AFQ+VDD+LD + +GK G+D K T P +L + R K Sbjct: 222 SLRTYARGIGLAFQIVDDILDVTASSDVLGKTAGKDLIADKTTYPKLLGLEESRLRAKGL 281 Query: 253 WKSTINDGKISVENLKK 269 I + K S++ K Sbjct: 282 ----IQEAKTSLDAFKP 294 >gi|296327940|ref|ZP_06870475.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154896|gb|EFG95678.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 297 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 84/256 (32%), Positives = 135/256 (52%), Gaps = 27/256 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I ++Y I +GGKRLRP L AT +L + V A A+E IH+ +L+HDD+ + Sbjct: 30 ETIAKGMEYAILNGGKRLRPFLLFATLELLNQNIEKGVKSAIALEMIHSYSLVHDDLPAL 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------LVACT 139 D+ RRGK+ V+G +L+GD LL+ AF ++ SQ+ LE LS +++ T Sbjct: 90 DNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVL----SQKNLELLSSKQIVNIISKT 145 Query: 140 --------LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + S +K +D+ Y+H KT L +E++ +IA ++ Sbjct: 146 SEYAGIDGMIGGQMIDIQSENKKIDLETLKYIH--SHKTGKLIKLPIEIACIIANLEKDK 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+ L+ Y +G+AFQ+ DD+LD G ++GK +G D K T P IL G + K Sbjct: 204 REVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSIL----GMEESK 259 Query: 251 NFWKSTINDGKISVEN 266 +T+ K ++N Sbjct: 260 KILNNTVEKAKEIIKN 275 >gi|328906289|gb|EGG26064.1| heptaprenyl diphosphate synthase component II [Propionibacterium sp. P08] Length = 324 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 17/307 (5%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACAIEFIHTATL 79 ++ +D + + ++I +GGKR RP+L L + E + V A +E H A+L Sbjct: 26 RQAGADTPFVAEAANHIISAGGKRFRPLLVVLCSQFGHEADEADLVRAAVVVELTHVASL 85 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 HDDV+D+++ RRG +A L WGN +++VGD+L S+A V E ++ + L A T Sbjct: 86 YHDDVMDEASKRRGAPSANLRWGNSVAIMVGDYLFSKASLAVAEL----GVDFVRLQART 141 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L +G++ + + YL V+ KT L + + ++++ AL+ Sbjct: 142 FSRLVQGQIAETRGPSQGEDPLAHYLKVVADKTGSLIATSAVFGAMVSHASAENVTALEQ 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE---KNFW 253 +G ++G FQL DD++D GK G D R PTLP +L G + K Sbjct: 202 FGEDIGEVFQLADDLIDVTSTAT--GKTPGTDLREKVPTLPTLLLRASGDPADAELKKML 259 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + ++D + + L++ +R N + + +A+ L LPD K++L + Sbjct: 260 DADLSDDAVLADVLEQ----LRANHVIEEARAEIQRRADRARTHLAPLPDGEAKQALDAL 315 Query: 314 VDFCLQR 320 D + R Sbjct: 316 CDEVVSR 322 >gi|227502598|ref|ZP_03932647.1| possible trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC 49725] gi|227076638|gb|EEI14601.1| possible trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC 49725] Length = 334 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 93/319 (29%), Positives = 158/319 (49%), Gaps = 18/319 (5%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACA 70 ME V + + + D V +L +GGKR RPM+ L + G V+ A Sbjct: 26 MEAVEEKLRSETDRGQDFLKDKVSHLSKAGGKRFRPMMALLASEYGAKPGCEKVIKSATV 85 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H ATL HDDV+D++ RRG +A W N ++L GD LL+ A ++ SQ Sbjct: 86 VEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGDALLAHASRLM----SQLDT 141 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + A T E G++R+ + + + Y+ VI+ KTAVL ++A + + +G Sbjct: 142 HTVGHFADTFEELVTGQMRETIGAGEANPVDH-YMAVIQEKTAVLIASAGYLGAYHSGAS 200 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 AL G +G+ FQ+VDDV+D + + GK G D R G TLPV+ A + + Sbjct: 201 ADHAAALYRIGGAIGMIFQIVDDVIDIFSDPKDSGKTPGTDLREGVFTLPVLYALEEDGE 260 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMREN----RALVDTEYRAYSYGQKAKDSLRCLPD 303 + + E +++A ++R++ RAL D +Y + ++ L LP+ Sbjct: 261 VGDQLRELLTGPLETDAE-VERAIELLRQSGGRQRALEDIN----AYLRTVEEQLSVLPE 315 Query: 304 SSWKKSLMEVVDFCLQRLN 322 +S ++L ++ D+ ++R+ Sbjct: 316 NSASQALRQLADYTVRRVG 334 >gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri] gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri] Length = 345 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 79/255 (30%), Positives = 128/255 (50%), Gaps = 21/255 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + +GGKR+RP L LA ++ + + ACA+E IHT +L+HDD+ + Sbjct: 77 ERLSESMRYSLLAGGKRIRPALCLAACELVGGDMETAMPTACALEMIHTMSLIHDDLPSM 136 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVA----CTL 140 D+ RRGK V+G + ++L GD LLS AF + ETK A + L ++ C Sbjct: 137 DNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETKGASAEKVLRVIVDVGKCVG 196 Query: 141 AEG--------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +EG + + + +N+ V Y+H KT L ++ +++ G Sbjct: 197 SEGLVGGQVVDIMSEGAGPENVTVDTLKYIHA--HKTGALLEVSVTAGAILGGASEEQIG 254 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+ Y N+G+AFQ+VDD+LD E+GK G+D GK T P ++ G + K Sbjct: 255 KLERYAQNIGLAFQVVDDILDCTASSEELGKTAGKDVAVGKTTYPSLV----GMEESKRI 310 Query: 253 WKSTINDGKISVENL 267 I+ K +E Sbjct: 311 AADLISKAKAELEGF 325 >gi|254302823|ref|ZP_04970181.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323015|gb|EDK88265.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 297 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 127/237 (53%), Gaps = 23/237 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I ++Y I +GGKRLRP L AT +L + V A A+E IH+ +L+HDD+ + Sbjct: 30 ETIAKGMEYAILNGGKRLRPFLLFATLELLNQNIEKGVKSAIALEMIHSYSLVHDDLPAL 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------LVACT 139 D+ RRGK+ V+G +L+GD LL+ AF ++ SQ+ L+ LS +++ T Sbjct: 90 DNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYIL----SQKNLKFLSSEQIVNIISKT 145 Query: 140 --------LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + S +K +D+ Y+H KT L +E++ +IA V+ Sbjct: 146 SEYAGINGMIGGQMIDIESENKKIDLETLKYIH--SHKTGKLIKLPIEIACIIANVEKDK 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ L+ Y +G+AFQ+ DD+LD G E+GK +G D K T P IL + K Sbjct: 204 KEVLEEYANLIGLAFQVKDDILDVEGTFEELGKPVGSDVDLHKATYPSILGMEESKK 260 >gi|309973121|gb|ADO96322.1| Geranyltranstransferase [Haemophilus influenzae R2846] Length = 296 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 17/242 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D +KY + GGKR+RP L AT ML + +A AIE IH +L+HDD+ +DD Sbjct: 35 DAMKYALLLGGKRVRPFLVYATGQMLGAEKQSLDYVAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-- 147 LRRG + + T++L GD L S AF ++ +T + A + L+LV LA+G Q Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALVQI-LAQGSGVQGM 153 Query: 148 --------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKKLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND 259 ++ Sbjct: 272 SE 273 >gi|327311326|ref|YP_004338223.1| polyprenyl synthetase [Thermoproteus uzoniensis 768-20] gi|326947805|gb|AEA12911.1| polyprenyl synthetase [Thermoproteus uzoniensis 768-20] Length = 347 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 98/335 (29%), Positives = 165/335 (49%), Gaps = 18/335 (5%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 M +L+ L+ K ++ + K + D + D V Y I +GGKRLRP+LTLA A + Sbjct: 14 MDVLDRLSEKYGPRIEEALAKYLLRDAADDFKDAVLYQISTGGKRLRPILTLAVAEAVSG 73 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 + + A +E IH +L++DD++D +RR K R +G+ ++L+G + Sbjct: 74 NYERALPAAAIVELIHNYSLIYDDIIDRGEVRRNKPTTRAAFGDYAAILIGIWYREAIEE 133 Query: 120 MVIET-KSQEALEALSLVACTLAEGE----LRQLS--------LSKNLDVTEEDYLHVIK 166 V++T K E ++ V + EGE L +L+ ++ V +DY+ ++ Sbjct: 134 AVLDTPKPSEFAREVAKVIKAIDEGERLDILFELAGRDDPYFVKARWPSVKLDDYIRMVG 193 Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KT L +AA + ++ + A +GMN GIAFQ+VDDVLD G+ + GK IG Sbjct: 194 LKTGALIAAAAKWGAMSVADDRQLADAAWDFGMNAGIAFQIVDDVLDIFGDPKKFGKEIG 253 Query: 227 EDFRNGK-PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 +D + K + V+L + +R + S ++ +S E+ ++ I+ A Sbjct: 254 KDIKEHKRGNIVVLLGLEELDERLRGELLSILSKPTVSDEDARRGVRILEGTNAKERALA 313 Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A Y ++A SL +P S K L E+ F +QR Sbjct: 314 LADKYRERALASLSKMPHS---KDLEELAAFIVQR 345 >gi|149280267|ref|ZP_01886389.1| octaprenyl-diphosphate synthase [Pedobacter sp. BAL39] gi|149228956|gb|EDM34353.1| octaprenyl-diphosphate synthase [Pedobacter sp. BAL39] Length = 323 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 14/302 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATA------LMLEYRGDNHVLLACAIEFIHTAT 78 SD ++ + Y++ GK++RPM A L +RG A +E +HTAT Sbjct: 28 SDAPLLDRITHYIVKRKGKQIRPMFVFFAAKLCGGILESTHRG------AALVELLHTAT 81 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L+HDDVVD++ RRG + +W N+ +VLVGD+LL++ + + L+ +S Sbjct: 82 LVHDDVVDNAYERRGFFSINALWKNKIAVLVGDYLLAKGLLLSVNNGEFRLLQIVSEAVK 141 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 ++EGEL Q+ + +D++E+ Y VI+ KTA L ++ + AG + + ++ +G Sbjct: 142 QMSEGELLQIEKVRRMDISEDLYFDVIRQKTASLIASCCACGAASAGADDETIEKMRLFG 201 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +GIAFQ+ + +++GK +G D + K TLP+I A K EK + + Sbjct: 202 EKVGIAFQI--KDDTFDFGTDDVGKPLGIDIKEKKVTLPLIYALNSSDKVEKKRIINLVK 259 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + +++ + + R Y Q+A D L + L ++V + Sbjct: 260 NHNDEPAKIQQIIDFVNAKEGVRYANERMVQYQQEAFDILYSFEPGPARTGLEQLVRYTT 319 Query: 319 QR 320 +R Sbjct: 320 ER 321 >gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem] gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem] Length = 295 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/240 (30%), Positives = 125/240 (52%), Gaps = 19/240 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y +F+GGKR+RP+L LA + ++ + ACA+E IHT +L+HDD+ +D+ R Sbjct: 36 MRYSVFAGGKRVRPVLLLAACEAVGGELNSALPAACAMEMIHTYSLIHDDLPAMDNDDFR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----------ALSLVACTL 140 RG V+G T++L GD LL++AF ++ + + E +E A + + + Sbjct: 96 RGNPTNHKVYGEATAILAGDALLTEAFILL--SCNGEGMEPGARLRVIHEIAHASGSRGM 153 Query: 141 AEGELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++ + ++D+ Y+H KT L A++ +++ G AL Y Sbjct: 154 VGGQMVDMESEGKHDIDMATLSYIHT--HKTGALIRASVRAGAILGGANEETFDALTRYA 211 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DDVLD G E+GK+ G D GK T P ++ + +R + + +N Sbjct: 212 DAIGLAFQIADDVLDVEGTTEELGKDAGSDQARGKATYPALVGLEASKRRAEELVQIALN 271 >gi|281342287|gb|EFB17871.1| hypothetical protein PANDA_017357 [Ailuropoda melanoleuca] Length = 363 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 88/297 (29%), Positives = 143/297 (48%), Gaps = 14/297 (4%) Query: 32 DVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDV 84 ++ +Y GK RP++ +A A + + V +A E IHTA+L+HDDV Sbjct: 71 EMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDVQASQRSIALIAEMIHTASLVHDDV 130 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +DD++ RRGK +WG + +VL GD +LS A + + + L+ V L GE Sbjct: 131 IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTAVISILTQVIEDLVRGE 190 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 QL +N + YL KTA L + + + S++ V + YG N+GIA Sbjct: 191 FLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 250 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQL+DDVLD+ +EMGK D + G T PV+ A Q+ + + + SV Sbjct: 251 FQLIDDVLDFTSCSDEMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMR------RFSV 304 Query: 265 E-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ +A + ++ + T Y A Y +A + L S + +L+++ + L R Sbjct: 305 PGDVDRARQYVLQSDGVQQTTYLAQRYCHEAVREISKLRPSPERDALIQLSEIVLTR 361 >gi|227888787|ref|ZP_04006592.1| possible trans-hexaprenyltranstransferase [Lactobacillus johnsonii ATCC 33200] gi|227850624|gb|EEJ60710.1| possible trans-hexaprenyltranstransferase [Lactobacillus johnsonii ATCC 33200] Length = 350 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 133/242 (54%), Gaps = 8/242 (3%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP---MLTLATALMLEYRGDNH 64 T KDM +N +ILK + + ++ D +K S GK LRP ML + + + Sbjct: 33 TQKDMIAINRIILKHVNTVPGLLGDALKDTFASPGKMLRPACVMLFGSFGPNANQKREEL 92 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L A + + + Sbjct: 93 QKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLF--ALSLTLLS 150 Query: 125 KSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++ ++L ++ T+ GE Q + + N++++E++YL IK KT VLF A + + Sbjct: 151 ENAQSLHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFGLACFIGA 210 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +G++ + K +G LG AFQL DD+LDY + K + D ++G + P+I A Sbjct: 211 YESGLKVTRALKAKKFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFA 270 Query: 242 FQ 243 Q Sbjct: 271 LQ 272 >gi|15602398|ref|NP_245470.1| hypothetical protein PM0533 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720796|gb|AAK02617.1| IspA [Pasteurella multocida subsp. multocida str. Pm70] Length = 295 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 142/258 (55%), Gaps = 13/258 (5%) Query: 13 EKVNFLILKRICSDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +++N + +++ D P + ++Y + GGKR+RP L AT ML + A + Sbjct: 13 QRINTFLAQQLNVDSSPSPLAEAMRYGVLLGGKRIRPFLVYATGRMLGADLNQLDYAAAS 72 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E +H +L+HDD+ +DD LRRG+ + + + T++L GD L + AF ++ + + + Sbjct: 73 VEAVHAYSLIHDDLPAMDDDHLRRGQPTCHIAFDHATAILAGDALQAFAFEILTQAPALQ 132 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVI------KSKTAVLFSAALEVSS 181 A + L+LV ++ + L ++LD ++E+ ++ +I ++KT + SAA+++ Sbjct: 133 AEQKLALVQTLSQAAGVKGMCLGQSLDLISEQKHISLIELEQIHRNKTGAMLSAAIQLGR 192 Query: 182 LIAG--VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + +++ Q L+ Y +G+AFQ+ DD+LD GE + +GK +G D K T P + Sbjct: 193 ICSPHFKNDTLAQQLQRYSEAIGLAFQVQDDILDIEGESDIIGKTVGSDLLADKSTYPKL 252 Query: 240 LAFQRGTKREKNFWKSTI 257 L ++ + +++ I Sbjct: 253 LGLAGAKQKAQELYQNAI 270 >gi|229549603|ref|ZP_04438328.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 29200] gi|255972303|ref|ZP_05422889.1| polyprenyl synthetase [Enterococcus faecalis T1] gi|256956509|ref|ZP_05560680.1| polyprenyl synthetase [Enterococcus faecalis DS5] gi|300860196|ref|ZP_07106283.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11] gi|312951206|ref|ZP_07770108.1| polyprenyl synthetase [Enterococcus faecalis TX0102] gi|229305268|gb|EEN71264.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 29200] gi|255963321|gb|EET95797.1| polyprenyl synthetase [Enterococcus faecalis T1] gi|256947005|gb|EEU63637.1| polyprenyl synthetase [Enterococcus faecalis DS5] gi|300849235|gb|EFK76985.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11] gi|310630740|gb|EFQ14023.1| polyprenyl synthetase [Enterococcus faecalis TX0102] gi|315034608|gb|EFT46540.1| polyprenyl synthetase [Enterococcus faecalis TX0027] gi|315152610|gb|EFT96626.1| polyprenyl synthetase [Enterococcus faecalis TX0031] gi|315159462|gb|EFU03479.1| polyprenyl synthetase [Enterococcus faecalis TX0312] Length = 326 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 88/295 (29%), Positives = 147/295 (49%), Gaps = 9/295 (3%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFI 74 LI + + + E I + + L SGGK LRP L T L E + + LL A ++E + Sbjct: 21 LIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFTQLGDEEKQEKQQLLKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEAL 133 H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ + E ++ Sbjct: 81 HMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNGSEFMKIN 140 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L GEL Q+S + ++ YL + KTA LFS + + V++ Sbjct: 141 AQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRL 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q + + Sbjct: 201 AKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQAA----PDVF 256 Query: 254 KSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ G+ I++E + ++ + + + + A KA ++ LPD + K Sbjct: 257 SPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAK 311 >gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801] gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802] gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801] gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802] Length = 309 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 13/262 (4%) Query: 9 LKDMEKVNFLILKR--ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LKD +++ L R + E I + ++Y + +GGKRLRP+L L T +L + + Sbjct: 23 LKDKQQLVEAALDRSLAITRPETIYEAMRYSLLAGGKRLRPILCLTTCELLGGTLEMALP 82 Query: 67 LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIE 123 ACA+E IHT +L+HDD+ +D+ RRGK+ +G ++L GD LL+ AF + Sbjct: 83 TACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKYGEDIAILAGDGLLAYAFEYAATQ 142 Query: 124 TKSQEALEALSLVA--------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 T++ + ++++ L G++ L D+T + + KT L Sbjct: 143 TRNVDPHNLINVLGRLGRTVGPAGLVGGQVLDLESEGKPDITVDTLKFIHTHKTGALLET 202 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++ +++AG Q L Y N+G+AFQ++DD+LD E+GK G+D R+ K T Sbjct: 203 SVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDDILDITSTQEELGKTAGKDLRDQKAT 262 Query: 236 LPVILAFQRGTKREKNFWKSTI 257 P + + K+ +N I Sbjct: 263 YPSLWGLEESKKQAQNLVSGAI 284 >gi|62898389|dbj|BAD97134.1| trans-prenyltransferase variant [Homo sapiens] Length = 415 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 78/245 (31%), Positives = 122/245 (49%), Gaps = 7/245 (2%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L +D++ + I K + + ++ +Y GK RP++ +A A + + H Sbjct: 98 LGWRDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRH 157 Query: 65 V-----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD + RRGK +WG + +VL GD +LS A Sbjct: 158 VQASQRAIALIAEMIHTASLVHDDVIDDVSSRRGKHTVNKIWGEKKAVLAGDLILSAASI 217 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 218 ALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 277 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG ++GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 278 VSVLGCPDPVVHEIAYQYGKDVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVL 337 Query: 240 LAFQR 244 A Q+ Sbjct: 338 FACQQ 342 >gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115928|ref|YP_004186087.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200] gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 294 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 127/230 (55%), Gaps = 14/230 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E+I + ++Y +F+GGKRLRP+L L++ +L + +ACAIE IHT +L+HDD+ + Sbjct: 28 EIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAM 87 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA------LEALSLVACT 139 D+ LRRGK V+G ++L GD LL+ + +++ + L+A + +A Sbjct: 88 DNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDYERILKATNEIATA 147 Query: 140 -----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G++ + LS+N ++T E+ + + KT L A++ + IAG AL Sbjct: 148 SGCKGIIGGQVVDI-LSQNTELTYEELKFMHEHKTGALIEASVCAGAYIAGATEEEIHAL 206 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + Y +G AFQ+ DD+LD GE ++GK +G D GK T I ++ Sbjct: 207 REYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDKEKGKFTFVNIFGLEK 256 >gi|312597572|pdb|3PKO|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Citrate gi|312597573|pdb|3PKO|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Citrate Length = 334 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 87/311 (27%), Positives = 155/311 (49%), Gaps = 19/311 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPML--------TLATALMLEYRGDNHVLLACA 70 +L+ + D + I + L+ SGGK LRP AT L+ A A Sbjct: 32 LLRTVQLDNQPIHHKILALLKSGGKLLRPGYFYLFSTFGNAATPAQLQAG-------AAA 84 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL+HDDV+DDS RRG ++ +G + ++ GDF+ + F V+++ + +L Sbjct: 85 IEILHVGTLIHDDVIDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLKSTTDRSL 144 Query: 131 EALSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + A + +GEL Q+ L+ D+T + YL+ I KTA LF+ + + +AG S Sbjct: 145 IQNHIDAMHRILQGELHQMDLNYREDITLDAYLNEIAGKTAELFALSCYQGAQLAGAPQS 204 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V + G+ +G A+Q++DD+LDY G+ K + ED R+G + + + Sbjct: 205 VIDRTRDIGIAIGCAYQMLDDILDYAGDPKRTQKPVLEDLRSG---VYSLPLLLSLSHAP 261 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 ++F K +++E++K ++ + + + A Y +A ++ LP S ++S Sbjct: 262 RDFHKLLKKKQAMTLEDIKHVQALVAQYDGVGAAKQLAQDYTDRALTLIQQLPVGSAQQS 321 Query: 310 LMEVVDFCLQR 320 L ++ L+R Sbjct: 322 LEQLTRLLLRR 332 >gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 294 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/227 (33%), Positives = 122/227 (53%), Gaps = 10/227 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + VKY + GGKRLRP+L +A ++ + + ACAIE IHT +L+HDD+ +D+ Sbjct: 34 EAVKYSLTVGGKRLRPILCMAGCEVVGGNYEEALTPACAIEMIHTYSLIHDDLPAMDNDT 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVACTLAE-- 142 LRRG + T++L GD LL++AF ++ + + + +E +S + L Sbjct: 94 LRRGHPTTWYKFDEATAILAGDALLNRAFEVLSQWNFDCDRKIKVIEEISKASGMLGMVL 153 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+ + DVT E+ L + + KT L +A++ + G LK YG ++G Sbjct: 154 GQQCDMDAEGRKDVTLEELLFIHRHKTGRLITASVVSGGITGGGSEEEIGTLKKYGDSIG 213 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AFQ++DDVLD G+ N++GKN+G D GK T G KR+ Sbjct: 214 LAFQIIDDVLDVIGDQNKIGKNVGSDLEKGKVTFVTFFGVD-GAKRK 259 >gi|229844084|ref|ZP_04464225.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 6P18H1] gi|229813078|gb|EEP48766.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 6P18H1] Length = 296 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 17/242 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D +KY + GGKR+RP L AT ML +A AIE IH +L+HDD+ +DD Sbjct: 35 DAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-- 147 LRRG + + T++L GD L S AF ++ +T + A + L+LV LA+G Q Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALVQI-LAQGSGVQGM 153 Query: 148 --------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKKLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND 259 ++ Sbjct: 272 SE 273 >gi|297343242|pdb|3N3D|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase F Lactobacillus Brevis Atcc 367 gi|297343243|pdb|3N3D|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase F Lactobacillus Brevis Atcc 367 Length = 335 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 87/311 (27%), Positives = 155/311 (49%), Gaps = 19/311 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPML--------TLATALMLEYRGDNHVLLACA 70 +L+ + D + I + L+ SGGK LRP AT L+ A A Sbjct: 25 LLRTVQLDNQPIHHKILALLKSGGKLLRPGYFYLFSTFGNAATPAQLQAG-------AAA 77 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL+HDDV+DDS RRG ++ +G + ++ GDF+ + F V+++ + +L Sbjct: 78 IEILHVGTLIHDDVIDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLKSTTDRSL 137 Query: 131 EALSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + A + +GEL Q+ L+ D+T + YL+ I KTA LF+ + + +AG S Sbjct: 138 IQNHIDAMHRILQGELHQMDLNYREDITLDAYLNEIAGKTAELFALSCYQGAQLAGAPQS 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V + G+ +G A+Q++DD+LDY G+ K + ED R+G + + + Sbjct: 198 VIDRTRDIGIAIGCAYQMLDDILDYAGDPKRTQKPVLEDLRSG---VYSLPLLLSLSHAP 254 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 ++F K +++E++K ++ + + + A Y +A ++ LP S ++S Sbjct: 255 RDFHKLLKKKQAMTLEDIKHVQALVAQYDGVGAAKQLAQDYTDRALTLIQQLPVGSAQQS 314 Query: 310 LMEVVDFCLQR 320 L ++ L+R Sbjct: 315 LEQLTRLLLRR 325 >gi|311265743|ref|XP_003130800.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like isoform 1 [Sus scrofa] Length = 410 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/245 (31%), Positives = 121/245 (49%), Gaps = 7/245 (2%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + ++ +Y GK RP++ + A +N Sbjct: 93 LGWRDLKGLYEDIRKELFISTTELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRD 152 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 153 MQASQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 212 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 213 ALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 272 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ +V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 273 VSVLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVL 332 Query: 240 LAFQR 244 A Q+ Sbjct: 333 FACQQ 337 >gi|302388553|ref|YP_003824375.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1] gi|302199181|gb|ADL06752.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1] Length = 328 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 95/301 (31%), Positives = 154/301 (51%), Gaps = 12/301 (3%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTA 77 + K + S +I + +L S GK +R +A ++ E + + V LA A+E +H A Sbjct: 28 VEKHLASAPPVIRNYTAHLAKSTGKFIRAYGLMACSMDEEDKVPADAVTLASAVELLHLA 87 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL-- 135 TL+HDDV+DD+ RRG + +G + +V+ GD+LLS A + + EAL + Sbjct: 88 TLVHDDVIDDADTRRGIETLQKRFGKKAAVICGDYLLSLALKLASSIPQKNQYEALDMPN 147 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 C + GELRQ + NLD++ YL +IK KTA LF A+ ++++ + + Sbjct: 148 YLCRICMGELRQEINNGNLDLSVYRYLSIIKGKTAALFEASFHGGAMLSTKDERKLRMYR 207 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 G ++G+ FQL+DD +DY E E KN+ D+ G TLP+I A + + Sbjct: 208 KAGNDVGMIFQLMDDCIDYEMEETEAKKNVRSDYEEGVVTLPLIHAMN-----QDESFSG 262 Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS-LMEVV 314 + +G +S + L + + E T+ A Y KA +++ L S KK+ +M VV Sbjct: 263 QVKNGLVSAKEL---YTKVLEAGGTAYTKAVAGRYYGKASNTIGNLGLSEAKKARIMTVV 319 Query: 315 D 315 D Sbjct: 320 D 320 >gi|145638945|ref|ZP_01794553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittII] gi|145271917|gb|EDK11826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittII] gi|309750914|gb|ADO80898.1| Geranyltranstransferase [Haemophilus influenzae R2866] Length = 296 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 17/242 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D +KY + GGKR+RP L AT ML +A AIE IH +L+HDD+ +DD Sbjct: 35 DAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-- 147 LRRG + + T++L GD L S AF ++ +T + A + L+LV LA+G Q Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALVQI-LAQGSGVQGM 153 Query: 148 --------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKRLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND 259 ++ Sbjct: 272 SE 273 >gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa] gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa] Length = 365 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/234 (32%), Positives = 131/234 (55%), Gaps = 18/234 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV- 84 + I + ++Y + +GGKR+RP+L +A+ ++ GD + + ACA+E IHT +L+HDD+ Sbjct: 100 QKINEAMRYSLLAGGKRVRPILCIASCELV--GGDEGLAMPAACALEMIHTMSLIHDDLP 157 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT 139 +D+ LRRGK + ++G T+VL GD LLS AF V S ++A++ + T Sbjct: 158 CMDNDDLRRGKPTSHKIFGEDTAVLAGDALLSLAFEHVARNTKNVSSDRVVQAIAELGST 217 Query: 140 -----LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 L G++ + S K + ++ +Y+HV KTA L AA+ +++ G + + Sbjct: 218 VGSKGLVAGQIVDIDSEGKEVSLSTLEYIHV--HKTAKLLEAAVVCGAIMGGADATSVER 275 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 L+ Y ++G+ FQ+VDD+LD E+GK G+D + K T P ++ K Sbjct: 276 LRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKATYPKLMGIDEAKK 329 >gi|313836214|gb|EFS73928.1| polyprenyl synthetase [Propionibacterium acnes HL037PA2] gi|314927649|gb|EFS91480.1| polyprenyl synthetase [Propionibacterium acnes HL044PA1] gi|314971352|gb|EFT15450.1| polyprenyl synthetase [Propionibacterium acnes HL037PA3] Length = 365 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 17/307 (5%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACAIEFIHTATL 79 ++ +D + + ++I +GGKR RP+L L + E + V A +E H A+L Sbjct: 67 RQAGADTPFVAEAANHIISAGGKRFRPLLVVLCSQFGHEADEADLVRAAVVVELTHVASL 126 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 HDDV+D+++ RRG +A L WGN +++VGD+L S+A V E ++ + L A T Sbjct: 127 YHDDVMDEASKRRGAPSANLRWGNSVAIMVGDYLFSKASLAVAEL----GVDFVRLQART 182 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L +G++ + + YL V+ KT L + + ++++ AL+ Sbjct: 183 FSRLVQGQIAETRGPSQGEDPLAHYLKVVADKTGSLIATSAVFGAMVSHASAENVTALEQ 242 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE---KNFW 253 +G ++G FQL DD++D GK G D R PTLP +L G + K Sbjct: 243 FGEDIGEVFQLADDLIDVTSTAT--GKTPGTDLREKVPTLPTLLLRASGDPADAELKKML 300 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + ++D + + L++ +R N + + +A+ L LPD K++L + Sbjct: 301 DADLSDDAVLADVLEQ----LRANHVIEEARAEIQRRADRARTHLAPLPDGEAKQALDAL 356 Query: 314 VDFCLQR 320 D + R Sbjct: 357 CDEVVSR 363 >gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70] gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70] Length = 297 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 85/262 (32%), Positives = 132/262 (50%), Gaps = 37/262 (14%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + Y + +GGKR+RP+L AT D + +ACAIE IHT +L+HDD+ +D+ Sbjct: 34 IKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDN 93 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-------------- 133 LRRGK V+G ++L GD LL+ AF ++ E + A Sbjct: 94 DDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEMSDARIVPATKIRLIEELAKAAGP 153 Query: 134 -SLVACTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +VA +A EGE +QLSL + +Y+H + KT + ++ +L+A ++ Sbjct: 154 EGMVAGQVADIEGEGKQLSLE------QLEYIH--RHKTGKMLQYSVLAGALLADAKDEQ 205 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L ++ +LG+AFQ+ DD+LD G ++GK +G D N K T P +L G K + Sbjct: 206 LHHLHTFASHLGLAFQIRDDILDIEGSEEKIGKRVGSDIENKKVTYPSLLTIA-GAKEKL 264 Query: 251 NFW---------KSTINDGKIS 263 +F K+ IND +S Sbjct: 265 SFHIAEAKRYLQKAEINDSVLS 286 >gi|311265745|ref|XP_003130801.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like isoform 2 [Sus scrofa] Length = 421 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 77/245 (31%), Positives = 121/245 (49%), Gaps = 7/245 (2%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + ++ +Y GK RP++ + A +N Sbjct: 104 LGWRDLKGLYEDIRKELFISTTELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRD 163 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 164 MQASQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 223 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 224 ALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 283 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ +V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 284 VSVLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVL 343 Query: 240 LAFQR 244 A Q+ Sbjct: 344 FACQQ 348 >gi|301784328|ref|XP_002927569.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Ailuropoda melanoleuca] Length = 467 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 79/245 (32%), Positives = 121/245 (49%), Gaps = 7/245 (2%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L +D+ + I K + + ++ +Y GK RP++ +A A + + Sbjct: 150 LGWRDLNGLYEDIRKELLISTAELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRD 209 Query: 65 VL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 210 VQASQRSIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 269 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 270 ALARIGNTAVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 329 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ +EMGK D + G T PV+ Sbjct: 330 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDEMGKPTSADLKLGLATGPVL 389 Query: 240 LAFQR 244 A Q+ Sbjct: 390 FACQQ 394 >gi|297625742|ref|YP_003687505.1| Heptaprenyl diphosphate synthase component II [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921507|emb|CBL56061.1| Heptaprenyl diphosphate synthase component II [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 356 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 84/286 (29%), Positives = 138/286 (48%), Gaps = 11/286 (3%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVAARL 99 GGKR RPML T+ + D +A + E H A+L HDDV+DD+ALRRG +A Sbjct: 78 GGKRFRPMLVAVTSQLGPQPNDAAAQIAAVVVELTHVASLYHDDVMDDAALRRGVPSANA 137 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLSLSKNLDV 156 +GN T+++VGD+L ++A V + + + + A T AE G++ ++ + Sbjct: 138 AYGNSTAIMVGDWLFARASNQVATLGN----DFVRMQADTFAELVTGQIDEMRGPQPGHD 193 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 YL+V+ KT L + ++ +G V AL +GM +G+ FQL DD++D Sbjct: 194 AMLHYLNVVAGKTGALIRTSAVFGAMTSGASREVLDALAQFGMQIGVVFQLADDLMDIMS 253 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + + GK G D R G TLP ++ + + KS I + L + ++R Sbjct: 254 D--DSGKAPGTDLREGVSTLPTLM-LAASEDSDDDELKSLIAGDLADDDVLARTLAMLRA 310 Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 N + + + A+ L LPD + ++L + D + R N Sbjct: 311 NHVIEEARADIVQRAELARKQLDLLPDGAATRALSRLCDEVVSRSN 356 >gi|315146167|gb|EFT90183.1| polyprenyl synthetase [Enterococcus faecalis TX4244] Length = 326 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 88/295 (29%), Positives = 146/295 (49%), Gaps = 9/295 (3%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFI 74 LI + + + E I + + L SGGK LRP L L E + + LL A ++E + Sbjct: 21 LIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEAL 133 H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ + E ++ Sbjct: 81 HMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNGSEFMKIN 140 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L GEL Q+S + ++ YL + KTA LFS + + V++ Sbjct: 141 AQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRL 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q N + Sbjct: 201 AKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQAA----PNVF 256 Query: 254 KSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ G+ I++E + ++ + + + + A KA ++ LPD + K Sbjct: 257 SPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAK 311 >gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii] Length = 365 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 89/281 (31%), Positives = 147/281 (52%), Gaps = 31/281 (11%) Query: 5 EDLTLKDMEKVNFLILKRICSDV---EMIP--------DVVKYLIFSGGKRLRPMLTLAT 53 E L + E +++ K I + E IP + ++Y + +GGKR+RP+L +A+ Sbjct: 66 EKFILPEFEFQEYMVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRPILCMAS 125 Query: 54 ALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLV 109 ++ GD + + ACA+E IHT +L+HDD+ +D+ LRRGK V+G T+VL Sbjct: 126 CEVV--GGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENTAVLA 183 Query: 110 GDFLLSQAFCMVIETKSQ--------EALEALSLVACT--LAEGELRQL-SLSKNLDVTE 158 GD LLS AF V TK+Q +A+ L + L G++ L S K + +TE Sbjct: 184 GDALLSLAFEHVA-TKTQNVAPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTE 242 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 +Y+H + KTA L AA+ +++ G + ++SY +G+ FQ+VDD+LD Sbjct: 243 LEYIH--QHKTAKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSS 300 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 +E+GK G+D K T P ++ ++ + +N+ Sbjct: 301 DELGKTAGKDLITDKATYPKLMGLEKARQYAGELMAKAMNE 341 >gi|313763299|gb|EFS34663.1| polyprenyl synthetase [Propionibacterium acnes HL013PA1] gi|313814961|gb|EFS52675.1| polyprenyl synthetase [Propionibacterium acnes HL059PA1] gi|313829356|gb|EFS67070.1| polyprenyl synthetase [Propionibacterium acnes HL063PA2] gi|314916753|gb|EFS80584.1| polyprenyl synthetase [Propionibacterium acnes HL005PA4] gi|314919121|gb|EFS82952.1| polyprenyl synthetase [Propionibacterium acnes HL050PA1] gi|314921201|gb|EFS85032.1| polyprenyl synthetase [Propionibacterium acnes HL050PA3] gi|314930371|gb|EFS94202.1| polyprenyl synthetase [Propionibacterium acnes HL067PA1] gi|314956154|gb|EFT00550.1| polyprenyl synthetase [Propionibacterium acnes HL027PA1] gi|314959687|gb|EFT03789.1| polyprenyl synthetase [Propionibacterium acnes HL002PA1] gi|314969768|gb|EFT13866.1| polyprenyl synthetase [Propionibacterium acnes HL037PA1] gi|315098089|gb|EFT70065.1| polyprenyl synthetase [Propionibacterium acnes HL059PA2] gi|315102693|gb|EFT74669.1| polyprenyl synthetase [Propionibacterium acnes HL046PA1] gi|315108835|gb|EFT80811.1| polyprenyl synthetase [Propionibacterium acnes HL030PA2] gi|327451646|gb|EGE98300.1| polyprenyl synthetase [Propionibacterium acnes HL087PA3] gi|327452299|gb|EGE98953.1| polyprenyl synthetase [Propionibacterium acnes HL083PA2] gi|328752132|gb|EGF65748.1| polyprenyl synthetase [Propionibacterium acnes HL025PA2] gi|328757024|gb|EGF70640.1| polyprenyl synthetase [Propionibacterium acnes HL087PA1] Length = 324 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 17/307 (5%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHTATL 79 ++ +D + + ++I +GGKR RP+L + + + D ++ A + E H A+L Sbjct: 26 RQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASL 85 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 HDDV+D+++ RRG +A L WGN +++VGD+L S+A V E ++ + L A T Sbjct: 86 YHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLFSKASLAVAEL----GVDFVKLQART 141 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L +G++ + YL V+ KT L +A+ ++++ AL+ Sbjct: 142 FSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAASAVFGAMVSHASAENVAALEQ 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL--AFQRGTKRE-KNFW 253 +G ++G FQL DD++D V GK G D R PTLP +L A E K Sbjct: 202 FGEDIGEVFQLADDLIDITSTVT--GKTPGTDLREKVPTLPTLLLRASDDPADAELKEML 259 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + ++D + + L K +R N + + +A+ L LPD K++L + Sbjct: 260 DADLSDDAVLSDVLDK----LRPNHVIDEARVEIQRRADRARTHLTPLPDGDAKQALEAL 315 Query: 314 VDFCLQR 320 D + R Sbjct: 316 CDEVVSR 322 >gi|302833229|ref|XP_002948178.1| hypothetical protein VOLCADRAFT_88541 [Volvox carteri f. nagariensis] gi|300266398|gb|EFJ50585.1| hypothetical protein VOLCADRAFT_88541 [Volvox carteri f. nagariensis] Length = 403 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 96/328 (29%), Positives = 155/328 (47%), Gaps = 40/328 (12%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALML-------EY- 59 +++E V+ + + + + + +Y G GKRLRP L L + L EY Sbjct: 55 QEVEIVSERLRHSVSTGIPALKTAAEYFFRHGMEGKRLRPSLVLLMSSALSPAVPPPEYL 114 Query: 60 -----RGDNHVL--------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106 H +A E IH A+LLHDDV+DD+ RRG V+ V GN+T+ Sbjct: 115 QVDLRPAAEHAPELRRRQQRIAEIAELIHVASLLHDDVIDDAETRRGVVSLNNVMGNKTA 174 Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166 +L GDFLL++A + ++ E + +S V L GE+ Q++ + + + YL Sbjct: 175 ILAGDFLLARASVSLAALRNSETVVLMSQVLEHLVSGEIMQMTATSEQLLDLDHYLAKTY 234 Query: 167 SKTAVLFSAALEVSSLIAGVQ------------NSVRQALKSYGMNLGIAFQLVDDVLDY 214 KTA L + + +++AGV + V SYG +LG+AFQ+VDD+LD Sbjct: 235 CKTASLMANSSRSIAVLAGVPPEHVCGAVCGSGDVVCDMAWSYGRHLGLAFQVVDDLLDL 294 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274 G + +GK D R+G T PV+ A Q + + +G +++ A ++ Sbjct: 295 TGSSSVLGKPALNDLRSGLATAPVLFAAQEEPELRPLILRRFKQEGDVAL-----AMTLI 349 Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLP 302 + + L E A + + A D +RCLP Sbjct: 350 QRTQGLRRAEELAAHHAKIAADMIRCLP 377 >gi|238019305|ref|ZP_04599731.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748] gi|237864004|gb|EEP65294.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748] Length = 292 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 115/220 (52%), Gaps = 13/220 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 + Y + GGKR+RP+L+ A ML ++ CA+E IHT +L+HDD+ +D+ R Sbjct: 35 MNYSLMQGGKRIRPILSKAVLEMLHKDPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYR 94 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--TLAEGE----- 144 RG + V+G ++L GD LL+ AF ++ ++ A E L + C T A E Sbjct: 95 RGNLTNHKVYGEGMAILAGDGLLTYAFQLMTANETATAQEKLDAIQCVATAAGPEGMVGG 154 Query: 145 --LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 LS K++ + E LH + KT LF+A++E+ ++ + R AL Y LG Sbjct: 155 QAFDMLSEDKHIPLEELKVLH--RGKTGALFNASVELGLILGNADTATRTALMEYANCLG 212 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + FQ+ DD+LD G + E+GK G D R K T +L Sbjct: 213 LLFQITDDILDVTGTIEELGKTPGSDIRQHKSTYVSLLGL 252 >gi|297170868|gb|ADI21887.1| geranylgeranyl pyrophosphate synthase [uncultured verrucomicrobium HF0130_25O04] Length = 277 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 111/215 (51%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + + + ++ GGKR+RP+L D+ + ++ +E +H ATL+HDDV+D + Sbjct: 50 VREFARRVLLGGGKRIRPLLVYRCGSDSPDVTDDLLKVSAILELVHVATLVHDDVLDHAK 109 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 +RR + G ++L+GD L S A + E + +S GE+ Q Sbjct: 110 IRRSRATIHTEIGEHAAILLGDALFSFALELATEFPTTRICNIVSSATRRTCSGEIMQTF 169 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 N D+ DY I+ KT F A+ + + +AG + + +G++LG+ +Q+ D Sbjct: 170 ARGNYDLGLPDYFSFIQDKTGEFFKASCQAGAFLAGHSECILDLVGEFGLSLGLNYQIFD 229 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 D++D G+ + GK +G DF +GK TLP++ FQ+ Sbjct: 230 DLVDSFGKTDAAGKCLGTDFDSGKITLPLLFLFQK 264 >gi|145590446|ref|YP_001152448.1| polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514] gi|145282214|gb|ABP49796.1| Polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 334 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 89/305 (29%), Positives = 158/305 (51%), Gaps = 21/305 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + V Y + +GGKRLRP+LTLATA + R + + A +E IH +L++DD++D +R Sbjct: 33 EAVLYQLKTGGKRLRPLLTLATAEAVSGRWEPALPAAAIVELIHNYSLIYDDIIDRGDVR 92 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQL-- 148 RG R +G+ ++L+G + V+ET ++ V + EGE + Sbjct: 93 RGMPTVRKAFGDNAAILIGIWYREAIEEAVLETPKPLVFAREVAKVIKAIDEGERLDILF 152 Query: 149 ----------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + ++ +VT +DY+ ++ KT VL +AA + L + +A ++G Sbjct: 153 ECAGRSDPYFAKARWKEVTLDDYVKMVSLKTGVLIAAAAKWGVLSVSDDGDLAEAAWNFG 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN---GKPTLPVILAFQRGTKREKNFWKS 255 +N GIAFQ++DDVLD G+ + GK IG+D + G + + L+ KRE+ S Sbjct: 213 LNAGIAFQIIDDVLDIYGDPKKFGKEIGKDIKEHKRGNAVVAIALSKLPPHKRERLL--S 270 Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 + + +K+A I+ E +A + A Y ++A+ L +P++ K+L ++++ Sbjct: 271 ILRIDSMRDAEVKEAVEILDEAKAKEEALRLADRYREEAERHLAKIPNN---KTLRDLLN 327 Query: 316 FCLQR 320 F L+R Sbjct: 328 FILKR 332 >gi|260494283|ref|ZP_05814414.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33] gi|260198429|gb|EEW95945.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33] Length = 297 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 84/256 (32%), Positives = 135/256 (52%), Gaps = 27/256 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y I +GGKRLRP L T +L V A A+E IH+ +L+HDD+ + Sbjct: 30 ETIANGMEYAILNGGKRLRPFLLFVTLELLNEDIKKGVKSAIALEMIHSYSLVHDDLPAL 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------LVACT 139 D+ RRGK+ V+G +L+GD LL+ AF ++ SQ+ LE LS +++ T Sbjct: 90 DNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVL----SQKNLELLSSKQIVNIISKT 145 Query: 140 --------LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + S +K +D+ Y+H KT L ++E++ +IA V+ Sbjct: 146 SEYAGINGMIGGQMIDIESENKKIDLETLKYIH--SHKTGKLIKLSIEIACIIANVEKDK 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+ L+ Y +G+AFQ+ DD+LD G ++GK +G D K T P IL G + K Sbjct: 204 REVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSIL----GMEESK 259 Query: 251 NFWKSTINDGKISVEN 266 +T+ K ++N Sbjct: 260 KILNNTVEKAKQIIKN 275 >gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701] gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701] Length = 300 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 80/236 (33%), Positives = 127/236 (53%), Gaps = 20/236 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDV 84 E + + ++Y + +GGKRLRP+L LA E G L A A+E IHT +L+HDD+ Sbjct: 36 ESLREAMRYSLLAGGKRLRPILCLAAC---ELAGGEVALALPTAVALEMIHTMSLIHDDL 92 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLV----- 136 +D+ LRRG+ V+G+ ++L GD LL++AF MV + + A L +V Sbjct: 93 PAMDNDDLRRGRPTNHKVYGDAQAILAGDALLTRAFEMVALRSPGVPAERLLQVVGELSL 152 Query: 137 ---ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 A L G++ L S K++D+ +Y+H+ KT L A + ++IAG + Q Sbjct: 153 AAGAPGLVGGQVVDLESEGKDVDLATLEYIHL--HKTGALLQACVLTGAMIAGAPEPLLQ 210 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 L++Y +G+AFQ++DD+LD +GK G+D K T P +L + +R Sbjct: 211 GLRTYSRGIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTYPKLLGLEESRQR 266 >gi|237737790|ref|ZP_04568271.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229419670|gb|EEO34717.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 300 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 126/246 (51%), Gaps = 18/246 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E+I + +KY + +GGKRLRP+L T +L + + A AIE IH+ +L+HDD+ + Sbjct: 34 EVIAEGMKYAVLNGGKRLRPILLFMTLDILGCEREKGLATASAIEMIHSYSLVHDDLPAL 93 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-SLVACT----- 139 D+ RRGK+ +G +L+GD LL+ AF ++ E S + E + +V T Sbjct: 94 DNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFYVLTEKNSHLSAEKIVEIVKLTSSYAG 153 Query: 140 ---LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + G++ + S K +D+ Y+H KT L +EV+ +IA R+ L Sbjct: 154 INGMIGGQMVDIASEGKKIDLETLRYMHA--HKTGKLIKLPVEVACVIADASIEDREVLT 211 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y +G+AFQ+ DD+LD G+ +GK +G D + K T P IL G K Sbjct: 212 KYSELIGLAFQIKDDILDIEGDFETIGKPVGSDLEHDKSTYPSIL----GMAESKKLLSE 267 Query: 256 TINDGK 261 TI + K Sbjct: 268 TIEEAK 273 >gi|254367578|ref|ZP_04983601.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica 257] gi|134253391|gb|EBA52485.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica 257] Length = 203 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 120/207 (57%), Gaps = 8/207 (3%) Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E+ Sbjct: 1 MMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACEL 60 Query: 180 SSLIA-GVQNSVRQA--LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + LI+ Q+ + +K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TL Sbjct: 61 AGLISIDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTL 120 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR-AYSYGQKAK 295 P I A T++++ K I G+ ++ + I M ++ VD Y+ A Y AK Sbjct: 121 PTIYALANVTEQQQQILKKAIEKGEYRIDEI----IAMVKDSGAVDYSYKVACQYADLAK 176 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 177 QQIDFLPDSEYKQAMILLCDLAVNRKN 203 >gi|182412460|ref|YP_001817526.1| polyprenyl synthetase [Opitutus terrae PB90-1] gi|177839674|gb|ACB73926.1| Polyprenyl synthetase [Opitutus terrae PB90-1] Length = 341 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 9/238 (3%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL----- 66 M ++ + +I + I + Y I + GKR+RP L + +RG+ V Sbjct: 27 MAALDTFLAGQISAFEPEIRSMADYCIDTSGKRIRPALVF----LGGWRGNGMVAPDLVR 82 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A +E +H ATL+HDD++D + +RR + A +G +VL+GD L + A + + + Sbjct: 83 VAAVVELVHLATLVHDDIMDGAEVRRNRRTAAREFGAAGAVLLGDALFAHALHLAAQFPT 142 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E A+S + GE+ Q +V+ DY +I KTA LF + + + +AG Sbjct: 143 TEVCAAVSESTRRVVSGEIVQTLRRGTTNVSRADYFRIIDLKTAELFRVSCFLGARLAGS 202 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +A+ +G +LG+A+Q+ DD+ DY G+ ++GK +G D +GK TLP+I +R Sbjct: 203 APGYVEAVSRFGEHLGVAYQIYDDLADYFGQEAKIGKTLGTDLASGKLTLPLIALSER 260 >gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1] Length = 292 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 116/214 (54%), Gaps = 13/214 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y + +GGKRLRP+L +A A L G+ + L+ +IEFIHT +L+HDD+ +D+ Sbjct: 34 AMNYSLMAGGKRLRPILIMAAADALGVDGEKFLRLSTSIEFIHTYSLIHDDLPAMDNDDY 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----CTLAEGE-- 144 RRGK+ V+G ++L GD LL+ AF ++ K+ +A + ++ AEG Sbjct: 94 RRGKLTNHKVFGEALAILAGDALLTMAFEIIATDKNVDAETKIKIITEMSKAAGAEGMVG 153 Query: 145 ---LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + S +K +D+ +H +KT LF AA+ +++AG L Y Sbjct: 154 GQVIDMQSENKKIDIQTLKQMHA--AKTGALFCAAIRSGAILAGADEKQLANLTEYARQF 211 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 G+AFQ+ DD+LD G+ +GK +G D +N K T Sbjct: 212 GLAFQITDDILDVVGDEKTIGKPVGSDEKNHKST 245 >gi|294785112|ref|ZP_06750400.1| geranyltranstransferase [Fusobacterium sp. 3_1_27] gi|294486826|gb|EFG34188.1| geranyltranstransferase [Fusobacterium sp. 3_1_27] Length = 297 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 83/256 (32%), Positives = 130/256 (50%), Gaps = 27/256 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E+I ++Y +GGKRLRP L AT +L V A A+E IH+ +L+HDD+ + Sbjct: 30 EIIAKGMEYATLNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPAL 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------LVACT 139 D+ RRGK+ V+G +L+GD LL+ AF ++ SQ+ LE LS +++ T Sbjct: 90 DNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVL----SQKNLELLSSEQIVNIISKT 145 Query: 140 LAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + + + +D+ E+ Y+H KT L +E++ +IA V+ Sbjct: 146 SEYAGINGMIGGQMIDIESENKKIGLETLKYIH--SHKTGKLIKLPIEIACIIANVEKDK 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+ L+ Y +G+AFQ+ DD+LD G ++GK +G D K T P IL G K K Sbjct: 204 RKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSIL----GMKESK 259 Query: 251 NFWKSTINDGKISVEN 266 T+ K ++N Sbjct: 260 KILNDTVEKAKEIIKN 275 >gi|325578412|ref|ZP_08148547.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392] gi|325160148|gb|EGC72277.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392] Length = 297 Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 76/239 (31%), Positives = 127/239 (53%), Gaps = 11/239 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +D+ Sbjct: 36 DAMKYGLLLGGKRVRPFLVYATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLPAMDNDE 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG+ + + T++L GD L + AF ++ E S A + L LV ++ + Sbjct: 96 LRRGQPTCHIAFDEATAILAGDALQAFAFEILTEAPSLSAEQKLQLVKVLAQASGVQGMC 155 Query: 150 LSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAG--VQNSVRQALKSYGMN 200 L ++LD+ E D L +I ++KT L +AAL++ + + + Q L+ Y Sbjct: 156 LGQSLDLISEHKQVNLDELELIHRNKTGALLTAALKLGFICSPHFENKELEQQLERYSQT 215 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L + ++ + +++ +++ Sbjct: 216 IGLAFQVQDDILDIEGDSAEIGKPVGSDLGLDKSTYPKLLGLEGAKQKAQELYQTALHE 274 >gi|224044763|ref|XP_002189942.1| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 1 [Taeniopygia guttata] Length = 677 Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 92/321 (28%), Positives = 151/321 (47%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L KD++ + I K + + ++ Y GK RPM+ +A A + + Sbjct: 360 LGRKDLKNLYEDIKKELLVSAAELKEMCDYYFDGKGKAFRPMIVVLMARACNIHHNNSKE 419 Query: 65 VL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD+ RRGK +WG + +VL GDF+LS A Sbjct: 420 VQASQRSVAIIAEMIHTASLVHDDVIDDANSRRGKRTLNQIWGERKAVLAGDFILSAASV 479 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 480 ALARIGNTTIVSVLTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 539 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ + +GK D + G T PV+ Sbjct: 540 VSILGCPDPKVHEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGKPTAADLKLGLATGPVL 599 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A ++ + + G ++++A+ + ++ + T Y A Y A +R Sbjct: 600 FACRQFPEMNAMIMRRFSKPG-----DVERAWKYVLQSDGVQQTTYLAQRYCHAATREIR 654 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S +++L+ + + L R Sbjct: 655 KLRPSPEREALVHLTEMVLMR 675 >gi|50843372|ref|YP_056599.1| heptaprenyl diphosphate synthase component II [Propionibacterium acnes KPA171202] gi|289425619|ref|ZP_06427391.1| polyprenyl synthetase [Propionibacterium acnes SK187] gi|289426999|ref|ZP_06428718.1| polyprenyl synthetase [Propionibacterium acnes J165] gi|295131445|ref|YP_003582108.1| polyprenyl synthetase [Propionibacterium acnes SK137] gi|50840974|gb|AAT83641.1| heptaprenyl diphosphate synthase component II [Propionibacterium acnes KPA171202] gi|289153920|gb|EFD02613.1| polyprenyl synthetase [Propionibacterium acnes SK187] gi|289159821|gb|EFD08006.1| polyprenyl synthetase [Propionibacterium acnes J165] gi|291375644|gb|ADD99498.1| polyprenyl synthetase [Propionibacterium acnes SK137] gi|313773345|gb|EFS39311.1| polyprenyl synthetase [Propionibacterium acnes HL074PA1] gi|313793594|gb|EFS41634.1| polyprenyl synthetase [Propionibacterium acnes HL110PA1] gi|313802896|gb|EFS44109.1| polyprenyl synthetase [Propionibacterium acnes HL110PA2] gi|313806342|gb|EFS44858.1| polyprenyl synthetase [Propionibacterium acnes HL087PA2] gi|313810752|gb|EFS48466.1| polyprenyl synthetase [Propionibacterium acnes HL083PA1] gi|313813689|gb|EFS51403.1| polyprenyl synthetase [Propionibacterium acnes HL025PA1] gi|313821259|gb|EFS58973.1| polyprenyl synthetase [Propionibacterium acnes HL036PA1] gi|313822286|gb|EFS60000.1| polyprenyl synthetase [Propionibacterium acnes HL036PA2] gi|313826156|gb|EFS63870.1| polyprenyl synthetase [Propionibacterium acnes HL063PA1] gi|313831063|gb|EFS68777.1| polyprenyl synthetase [Propionibacterium acnes HL007PA1] gi|313833193|gb|EFS70907.1| polyprenyl synthetase [Propionibacterium acnes HL056PA1] gi|313838164|gb|EFS75878.1| polyprenyl synthetase [Propionibacterium acnes HL086PA1] gi|314926005|gb|EFS89836.1| polyprenyl synthetase [Propionibacterium acnes HL036PA3] gi|314962260|gb|EFT06361.1| polyprenyl synthetase [Propionibacterium acnes HL002PA2] gi|314963225|gb|EFT07325.1| polyprenyl synthetase [Propionibacterium acnes HL082PA1] gi|314973953|gb|EFT18049.1| polyprenyl synthetase [Propionibacterium acnes HL053PA1] gi|314976881|gb|EFT20976.1| polyprenyl synthetase [Propionibacterium acnes HL045PA1] gi|314979346|gb|EFT23440.1| polyprenyl synthetase [Propionibacterium acnes HL072PA2] gi|314985002|gb|EFT29094.1| polyprenyl synthetase [Propionibacterium acnes HL005PA1] gi|314986322|gb|EFT30414.1| polyprenyl synthetase [Propionibacterium acnes HL005PA2] gi|314988581|gb|EFT32672.1| polyprenyl synthetase [Propionibacterium acnes HL005PA3] gi|315079698|gb|EFT51686.1| polyprenyl synthetase [Propionibacterium acnes HL053PA2] gi|315083912|gb|EFT55888.1| polyprenyl synthetase [Propionibacterium acnes HL027PA2] gi|315085048|gb|EFT57024.1| polyprenyl synthetase [Propionibacterium acnes HL002PA3] gi|315089477|gb|EFT61453.1| polyprenyl synthetase [Propionibacterium acnes HL072PA1] gi|315097704|gb|EFT69680.1| polyprenyl synthetase [Propionibacterium acnes HL038PA1] gi|315107928|gb|EFT79904.1| polyprenyl synthetase [Propionibacterium acnes HL030PA1] gi|327325724|gb|EGE67521.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL096PA3] gi|327330828|gb|EGE72573.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL096PA2] gi|327442879|gb|EGE89533.1| polyprenyl synthetase [Propionibacterium acnes HL043PA2] gi|327445271|gb|EGE91925.1| polyprenyl synthetase [Propionibacterium acnes HL043PA1] gi|327447743|gb|EGE94397.1| polyprenyl synthetase [Propionibacterium acnes HL013PA2] gi|327452516|gb|EGE99170.1| polyprenyl synthetase [Propionibacterium acnes HL092PA1] gi|328755076|gb|EGF68692.1| polyprenyl synthetase [Propionibacterium acnes HL020PA1] gi|328761560|gb|EGF75078.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL099PA1] gi|332676315|gb|AEE73131.1| heptaprenyl diphosphate synthase component 2 [Propionibacterium acnes 266] Length = 324 Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 17/307 (5%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHTATL 79 ++ +D + + ++I +GGKR RP+L + + + D ++ A + E H A+L Sbjct: 26 RQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASL 85 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 HDDV+D+++ RRG +A L WGN +++VGD+L S+A V E ++ + L A T Sbjct: 86 YHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLFSKASLAVAEL----GVDFVKLQART 141 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L +G++ + YL V+ KT L +A+ ++++ AL+ Sbjct: 142 FSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAASAVFGAMVSHASAENVAALEQ 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL--AFQRGTKRE-KNFW 253 +G ++G FQL DD++D V GK G D R PTLP +L A E K Sbjct: 202 FGEDIGEVFQLADDLIDITSTVT--GKTPGTDLREKVPTLPTLLLRASDDPADAELKEML 259 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + ++D + + L K +R N + + +A+ L LPD K++L + Sbjct: 260 DADLSDDAVLSDVLDK----LRANHVIDEARVEIQRRADRARTHLTPLPDGDAKQALEAL 315 Query: 314 VDFCLQR 320 D + R Sbjct: 316 CDEVVSR 322 >gi|303252274|ref|ZP_07338440.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247789|ref|ZP_07529826.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307256855|ref|ZP_07538633.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261287|ref|ZP_07542962.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|302648733|gb|EFL78923.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855732|gb|EFM87898.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306864589|gb|EFM96494.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869018|gb|EFN00820.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 297 Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 86/266 (32%), Positives = 143/266 (53%), Gaps = 24/266 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y + GGKR+RP L AT ML+ + A A+E IH +L+HDD+ +DD Sbjct: 36 EAMSYAVLLGGKRVRPFLIYATGRMLDVPLEQLDHSAAAMEAIHAYSLVHDDLPAMDDDK 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACTLAEGEL 145 LRRGK + + T++L GD L S AF ++++ T SQ+ + SL A G Sbjct: 96 LRRGKPTCHIAFDEATAILAGDALQSFAFELIVQDESLTDSQKVRQIQSLTQAAGARG-- 153 Query: 146 RQLSLSKNLDVTEEDY------LHVI-KSKTAVLFSAALEVS-SLIAGVQN-SVRQALKS 196 + L ++LD+ ED L +I ++KT L A++ + +L QN +++Q L+ Sbjct: 154 --MCLGQSLDLLAEDKAVNLAELELIHRNKTGALIIASVLMGFNLSVHSQNLAIKQPLER 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y +G+AFQ+ DD+LD GE +++GK +G D K T P +L + ++ ++ +++ Sbjct: 212 YAQAIGLAFQVQDDILDVIGETDKIGKTVGSDENLHKSTYPKLLGLEGAQQKAQDLYQTA 271 Query: 257 IN---DGKISVENLKK--AFIIMREN 277 +N + LK+ FI+ REN Sbjct: 272 LNALEELPFDTTALKELAHFIVKREN 297 >gi|58271024|ref|XP_572668.1| trans-hexaprenyltranstransferase [Cryptococcus neoformans var. neoformans JEC21] gi|134114824|ref|XP_773710.1| hypothetical protein CNBH1650 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256338|gb|EAL19063.1| hypothetical protein CNBH1650 [Cryptococcus neoformans var. neoformans B-3501A] gi|57228927|gb|AAW45361.1| trans-hexaprenyltranstransferase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 483 Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 104/189 (55%), Gaps = 12/189 (6%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IH A+LLHDDV+D S+LRRG +A +GN+ S+L GDFLL +A + S Sbjct: 221 LASITEMIHVASLLHDDVIDSSSLRRGTPSAPSTFGNKLSILSGDFLLGRASVALARLGS 280 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTE-----EDYLHVIKSKTAVLFSAALEVSS 181 +E +E L+ V L EGE+ QL + + EDY+ KTA L + + + Sbjct: 281 REVVELLATVIANLVEGEMMQLRATSEPEKAPTAKGFEDYMRKTYLKTASLMAKSARAAV 340 Query: 182 LIAGVQNS------VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK-NIGEDFRNGKP 234 ++ G + V+ YG NLGIAFQL+DD LD+ + +GK ++G D R G Sbjct: 341 ILGGCGSVSEEGAWVKDVAYGYGRNLGIAFQLIDDALDFLPPDSSLGKPSLGADLRLGLA 400 Query: 235 TLPVILAFQ 243 T P + A++ Sbjct: 401 TAPALFAWE 409 >gi|327333136|gb|EGE74863.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL097PA1] Length = 324 Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 17/307 (5%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHTATL 79 ++ +D + + ++I +GGKR RP+L + + + D ++ A + E H A+L Sbjct: 26 RQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASL 85 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 HDDV+D+++ RRG +A L WGN +++VGD+L S+A V E ++ + L A T Sbjct: 86 YHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLFSRASLAVAEL----GVDFVKLQART 141 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L +G++ + YL V+ KT L +A+ ++++ AL+ Sbjct: 142 FSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAASAVFGAMVSHASAENVAALEQ 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL--AFQRGTKRE-KNFW 253 +G ++G FQL DD++D V GK G D R PTLP +L A E K Sbjct: 202 FGEDIGEVFQLADDLIDITSTVT--GKTPGTDLREKVPTLPTLLLRASDDPADAELKEML 259 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + ++D + + L K +R N + + +A+ L LPD K++L + Sbjct: 260 DADLSDDAVLSDVLDK----LRANHVIDEARVEIQRRADRARTHLTPLPDGDAKQALEAL 315 Query: 314 VDFCLQR 320 D + R Sbjct: 316 CDEVVSR 322 >gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803] gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803] Length = 312 Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 83/233 (35%), Positives = 127/233 (54%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + +GGKRLRP+L LA ++ + A A+E IHT +L+HDD+ + Sbjct: 48 ESLRESMRYSLLAGGKRLRPILCLAACELVGGDASLAMPTAVALEMIHTMSLIHDDLPAM 107 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---ETKSQEAL----EALSLV-- 136 D+ LRRG+ V+G+ ++L GD LLS+AF MV E E L LSLV Sbjct: 108 DNDDLRRGRPTNHKVYGDAMAILAGDALLSRAFEMVAVRSEGVPPERLLKVVAELSLVSG 167 Query: 137 ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L S + +D+ +Y+H+ KTA L A + +LI G S A++ Sbjct: 168 APGLVGGQVVDLESEGREVDLETLEYIHL--HKTAALLRACVVTGALIGGADASQVDAMR 225 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +Y +G+AFQ+VDD+LD + +GK G+D K T P +L + R Sbjct: 226 TYANGIGLAFQIVDDILDVTASSDVLGKTAGKDLIADKTTYPKLLGLEPSRAR 278 >gi|121145|sp|P80042|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; Flags: Precursor gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum] Length = 369 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 74/236 (31%), Positives = 128/236 (54%), Gaps = 15/236 (6%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I + +I + ++Y + +GGKR+RPML LA ++ +N + ACA+E IHT +L+HD Sbjct: 98 IVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIHD 157 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---------QEALE 131 D+ +D+ LRRGK ++G +VL GD LL+ AF ++ + + A Sbjct: 158 DLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAEL 217 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 A S+ L G++ + + N V+ E +++HV KTA L +++ + +++ G N Sbjct: 218 AKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHV--HKTAALLESSVVLGAILGGGTNV 275 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + L+ + +G+ FQ+VDD+LD E+GK G+D K T P +L ++ Sbjct: 276 EVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKA 331 >gi|256845599|ref|ZP_05551057.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2] gi|256719158|gb|EEU32713.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2] Length = 297 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 83/256 (32%), Positives = 131/256 (51%), Gaps = 27/256 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I ++Y I +GGKRLRP L AT +L V A A+E IH+ +L+HDD+ + Sbjct: 30 ETIAKGMEYAILNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPAL 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------LVACT 139 D+ RRGK+ V+G +L+GD LL+ AF ++ SQ+ LE LS +++ T Sbjct: 90 DNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVL----SQKNLEFLSSEQLVNIISKT 145 Query: 140 LAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + + + +D+ E+ Y+H KT L +E++ +IA V+ Sbjct: 146 SEYAGINGMIGGQMIDIESENKKIGLETLKYIH--SHKTGKLIKLPIEIACIIANVEKDK 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+ L+ Y +G+AFQ+ DD+LD G ++GK +G D K T P IL G + K Sbjct: 204 RKVLEEYADLIGLAFQVKDDILDIEGTFEDLGKPVGSDVDLHKATYPSIL----GMEESK 259 Query: 251 NFWKSTINDGKISVEN 266 +T+ K ++N Sbjct: 260 KILNNTVEKAKEIIKN 275 >gi|157127995|ref|XP_001661265.1| trans-prenyltransferase [Aedes aegypti] gi|108882325|gb|EAT46550.1| trans-prenyltransferase [Aedes aegypti] Length = 249 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 74/250 (29%), Positives = 127/250 (50%), Gaps = 5/250 (2%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTA+L+HDDV+D S RRGK + ++W ++ GD++L+ A ++ K E Sbjct: 4 EMIHTASLVHDDVIDQSFARRGKPSVNVIWNHKKVTQAGDYVLAVASMLLARLKHDEVTH 63 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS V L +GE QL + + Y KTA L + +L+ ++++G + Sbjct: 64 ILSQVLTDLVQGEFMQLGSKETENERFAHYFTKTYRKTASLIANSLKAVAVLSGADEQMV 123 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + YG NLG+AFQ VDD+LD+ MGK D + G T PV+ A ++ + Sbjct: 124 ELSFQYGRNLGLAFQFVDDLLDFVSSSEAMGKPAAADLKLGLATAPVLFACEKFPELNPM 183 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + G ++++A+ ++ +++ L T + A + +A + +S ++K L+ Sbjct: 184 ILRRFREPG-----DVERAYELVHQSQGLEQTRFLARKHCIEALRLASQISESPYQKGLI 238 Query: 312 EVVDFCLQRL 321 V DF L R+ Sbjct: 239 VVGDFVLNRM 248 >gi|325970901|ref|YP_004247092.1| trans-hexaprenyltranstransferase [Spirochaeta sp. Buddy] gi|324026139|gb|ADY12898.1| Trans-hexaprenyltranstransferase [Spirochaeta sp. Buddy] Length = 328 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 88/283 (31%), Positives = 142/283 (50%), Gaps = 21/283 (7%) Query: 40 SGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 S GK LRP L L T+ + E ++ + + +E IH A+L+HDD++D +A RRGK Sbjct: 43 SVGKMLRPALILITSALGEQEVTEDAIRVGSILELIHLASLVHDDIIDSAAKRRGKSTVF 102 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 G + +VL GDFLL++A + + +S L E EL Q + + ++ Sbjct: 103 AKVGAKQAVLAGDFLLAKALMLTSGKERGMDSRVVSRALSRLCESELEQDAGQGDFFISH 162 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGV----QNSVRQAL-KSYGMNLGIAFQLVDDVLD 213 YL I KTA LF+ S AGV RQ L G +G+AFQ+ DD+LD Sbjct: 163 HTYLRRIAGKTASLFAL-----SCYAGVALQESEPTRQMLCHRIGYCMGMAFQIQDDILD 217 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND------GKISVENL 267 Y G +++GK+ G D + G PTLP+I A K+E+ ++ ++D + + + Sbjct: 218 YAGSSSKLGKHTGNDLKCGIPTLPLIYAL----KQERENGQTQLHDLLYQASTPLKEKTV 273 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 K+A I++ + + A SY ++A ++ L ++ L Sbjct: 274 KQALILVESLGGVQKAQILAESYKKRAFSDIKRLAHPQVERQL 316 >gi|315081026|gb|EFT53002.1| polyprenyl synthetase [Propionibacterium acnes HL078PA1] Length = 324 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 17/307 (5%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHTATL 79 ++ +D + + ++I +GGKR RP+L + + + D ++ A + E H A+L Sbjct: 26 RQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASL 85 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 HDDV+D+++ RRG +A L WGN +++VGD+L S+A V E ++ + L A T Sbjct: 86 YHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLFSKASLAVAEL----GVDFVKLQART 141 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L +G++ + YL V+ KT L +A+ ++++ AL+ Sbjct: 142 FSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAASAIFGAMVSHASAENVAALEQ 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL--AFQRGTKRE-KNFW 253 +G ++G FQL DD++D V GK G D R PTLP +L A E K Sbjct: 202 FGEDIGEVFQLADDLIDITSTVT--GKTPGTDLREKVPTLPTLLLRASDDPADAELKEML 259 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + ++D + + L K +R N + + +A+ L LPD K++L + Sbjct: 260 DADLSDDAVLSDVLDK----LRANHVIDEARVEIQRRADRARTHLTPLPDGDAKQALEAL 315 Query: 314 VDFCLQR 320 D + R Sbjct: 316 CDEVVSR 322 >gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] Length = 299 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 80/256 (31%), Positives = 135/256 (52%), Gaps = 18/256 (7%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 S + + D ++Y + GGKR+RP L LA A + + + ACA+E IH +L+HDD Sbjct: 31 ASASQRLQDAMRYGLLGGGKRIRPALCLAAAEAVGGQRQIALAPACALEMIHAYSLMHDD 90 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV----- 136 + +D+ LRRG+ A + + +++L GD L ++AF ++ A L++V Sbjct: 91 LPAMDNDDLRRGRATAHIAFDESSAILAGDALQAEAFRVLATAPRLSAEVKLAMVKALAN 150 Query: 137 ACT---LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVR 191 AC + G+ L S+++ L + + + +H + KT L A++ + +L GV++ ++ Sbjct: 151 ACGANGMVGGQAIDLESVARTLTLDQLENMH--RHKTGALIEASVHLGALAGGVKDPALL 208 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 AL Y LG+AFQ+ DD+LD G+ MGK G D GKPT P +L G K + Sbjct: 209 DALARYARALGLAFQVQDDLLDIEGDTEVMGKTQGSDIARGKPTYPALL----GPKGARE 264 Query: 252 FWKSTINDGKISVENL 267 + + S++ L Sbjct: 265 LLARLLAEAHESLKGL 280 >gi|319776299|ref|YP_004138787.1| geranyltranstransferase [Haemophilus influenzae F3047] gi|317450890|emb|CBY87115.1| geranyltranstransferase [Haemophilus influenzae F3047] Length = 296 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 15/241 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D +KY + GGKR+RP L T ML +A AIE IH +L+HDD+ +DD Sbjct: 35 DAMKYALLLGGKRVRPFLVYTTGQMLGAGKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG + + T++L GD L S AF ++ +T + A + L+LV ++ + Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALVQILAKSSGIQGMC 154 Query: 150 LSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSYG 198 L ++LD+ E + +H ++KT L AAL++ + + ++ Q+L Y Sbjct: 155 LGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFADKTLEQSLTQYA 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S ++ Sbjct: 213 ETIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALS 272 Query: 259 D 259 + Sbjct: 273 E 273 >gi|294055567|ref|YP_003549225.1| Dimethylallyltranstransferase [Coraliomargarita akajimensis DSM 45221] gi|293614900|gb|ADE55055.1| Dimethylallyltranstransferase [Coraliomargarita akajimensis DSM 45221] Length = 344 Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 132/252 (52%), Gaps = 13/252 (5%) Query: 28 EMIPDV---VKYLIFSGGKRLRPMLTL-----ATALMLEYRGDNHVLLACAIEFIHTATL 79 EM P+V V+Y+ GKRLRPML AL R D+ V L IE +H ATL Sbjct: 41 EMEPEVQDHVRYVFGHSGKRLRPMLVAYSGWEGPALT---RADDLVKLGSVIELVHLATL 97 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 +HDD++D++ R + A +G +VL+GD L S A + E + E ++ Sbjct: 98 VHDDILDEADTRHRQETAAKKFGPAAAVLIGDVLFSHALKLAAEFDTNEVCRTVAQATSR 157 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + GE+ Q ++ + E Y VI+ KTA LF + + + +AG + +A +G Sbjct: 158 VCAGEIAQTYQRGEVNYSREFYFRVIQLKTAELFEVSCRLGAKVAGYTDEFSEAAGLFGR 217 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR--GTKREKNFWKSTI 257 +LGIA+Q+ DD++D + + +GK +G D GK TLP++L ++ ++R++ + Sbjct: 218 HLGIAYQIFDDLVDLYADESMIGKTLGTDLDKGKFTLPLLLLLEKVPSSERDRLLERFKA 277 Query: 258 NDGKISVENLKK 269 D ++ E K+ Sbjct: 278 GDKTVAAEFTKR 289 >gi|315283868|ref|ZP_07871917.1| heptaprenyl diphosphate synthase component 2 [Listeria marthii FSL S4-120] gi|313612487|gb|EFR86580.1| heptaprenyl diphosphate synthase component 2 [Listeria marthii FSL S4-120] Length = 288 Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 10/216 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +K LI +GGK LRP L +A ++ + V +A A+E +H ATL+HDDVVDDS LRR Sbjct: 1 MKDLIHAGGKLLRPAFALLSAQAGPDFDKERAVSIAAALEVLHMATLIHDDVVDDSPLRR 60 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLS 149 G +G +V GD+L C I + ++E + + + + GEL Q+ Sbjct: 61 GIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHASSVENIEFNSKNIEKILMGELDQMR 118 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY--GMNLGIAFQL 207 S ++VT +YL I KTA LF AL S +G + S K Y G LG+AFQ+ Sbjct: 119 TSYKMNVTVREYLTRISGKTAQLF--ALSCYSGASGSKASRLTVAKCYNIGHYLGMAFQI 176 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +DDVLDY +GK + D + G +LP+I A + Sbjct: 177 IDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 212 >gi|313681996|ref|YP_004059734.1| polyprenyl synthetase [Sulfuricurvum kujiense DSM 16994] gi|313154856|gb|ADR33534.1| Polyprenyl synthetase [Sulfuricurvum kujiense DSM 16994] Length = 299 Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 8/206 (3%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 SGGKRLR L L A LL +E IH A+LLHDDV+D++ LRRG + Sbjct: 31 LSGGKRLRARLILTIAP----HEPKAPLLGAIVELIHAASLLHDDVIDEAQLRRGVPSVN 86 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 G++T++++GD L S+AF + A A++ L+ GE+ +S+++ + Sbjct: 87 ATEGSKTAIMLGDILYSKAFSELTSFDPSIA-RAVAESVTRLSVGEMMDVSMAERFNTDR 145 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + YL ++ KTA L A ++++AG +A +YG NLG+AFQ+VDD+LD + Sbjct: 146 DLYLKMLYLKTATLIEACAYSAAVLAGKDA---EAHATYGKNLGLAFQIVDDILDITADE 202 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQR 244 +GK DF GK TLP I +++ Sbjct: 203 ATLGKPSLNDFSEGKVTLPYIDLYEK 228 >gi|313819453|gb|EFS57167.1| polyprenyl synthetase [Propionibacterium acnes HL046PA2] Length = 324 Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 17/307 (5%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHTATL 79 ++ +D + + ++I +GGKR RP+L + + + D ++ A + E H A+L Sbjct: 26 RQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASL 85 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 HDDV+D+++ RRG +A L WGN +++VGD+L S+A V E ++ + L A T Sbjct: 86 YHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLFSKASLAVAEL----GVDFVKLQART 141 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L +G++ + YL V+ KT L +A+ ++++ AL+ Sbjct: 142 FSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAASAIFGAMVSHASAENVAALEQ 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL--AFQRGTKRE-KNFW 253 +G ++G FQL DD++D V GK G D R PTLP +L A E K Sbjct: 202 FGEDIGEVFQLADDLIDITSTVT--GKTPGTDLREKVPTLPTLLLRASDDPADAELKEML 259 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + ++D + + L K +R N + + +A+ L LPD K++L + Sbjct: 260 DADLSDDAVLSDVLDK----LRANHVIDEARVEIQRRADRARTHLTPLPDGDAKQALEAL 315 Query: 314 VDFCLQR 320 D + R Sbjct: 316 CDEVVSR 322 >gi|330508568|ref|YP_004384996.1| polyprenyl synthetase [Methanosaeta concilii GP-6] gi|328929376|gb|AEB69178.1| polyprenyl synthetase [Methanosaeta concilii GP-6] Length = 311 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 127/228 (55%), Gaps = 16/228 (7%) Query: 17 FLILKRICSDVEMIPD-----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 LI K + + V +PD ++ Y++ + GKR+RP++ + +A L + A AI Sbjct: 9 HLINKELAALVRDLPDSPLGEILSYVLSAPGKRVRPLILILSAEALGTPPAQSISAALAI 68 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H A+L+HDD++D RRG +A +G + S+L GD+L+S++ + I SQ + Sbjct: 69 ELVHAASLVHDDILDHGIERRGSPSALERFGPEASLLAGDWLISRSIDL-ISGYSQPVIR 127 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 A S ++EGEL LS + + EDY I KTA LFSA+ ++ LI+G Sbjct: 128 AFSRACMDMSEGELMDLSCAG----SPEDYYQCITRKTASLFSASAKIGGLISGAGEEDV 183 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 L+SYG++LG+ +Q++DD+ ++ +G + G+ + TLP I Sbjct: 184 ARLESYGLHLGLGYQVLDDLEEF------LGLDQGKSSQKTSVTLPKI 225 >gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303] gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303] Length = 306 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 126/233 (54%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + +GGKRLRP+L +A + + A A+E IHT +L+HDD+ + Sbjct: 42 EQLREAMRYSLLAGGKRLRPILCIAACELAGGEPTQALPTAVALEMIHTMSLIHDDLPAM 101 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-------ALSLVAC 138 D+ LRRG+ V+G+ ++L GD LL+++F MV A E LSLVA Sbjct: 102 DNDDLRRGRPTNHKVYGDAVAILAGDALLTRSFEMVALRSKGVAPERLLKVVGELSLVAG 161 Query: 139 T--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L K +D+ +++H+ KT L SA + +LI G ++ + AL+ Sbjct: 162 APGLVGGQVVDLECEGKEVDLETLEFIHL--HKTGALLSACVICGALIGGAEDDLIDALR 219 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 Y +G+AFQ++DD+LD + +GK G+D K T P +L + +R Sbjct: 220 IYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLLADKTTYPKLLGLEESRRR 272 >gi|32267223|ref|NP_861255.1| hypothetical protein HH1724 [Helicobacter hepaticus ATCC 51449] gi|32263276|gb|AAP78321.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 303 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 76/221 (34%), Positives = 120/221 (54%), Gaps = 18/221 (8%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDDSALRRGK 94 Y S GK LR L L+ + M E L CA IE I +A+LLHDDV+D+S RRG Sbjct: 30 YGHLSYGKMLRSKLLLSISDMNE-----DALRVCALIEMIQSASLLHDDVIDESLTRRGI 84 Query: 95 VAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLVACTLAEGELRQLSL 150 + +GN+ ++++GD L S+AF C+ + +++S L+ GE+ + L Sbjct: 85 PSINATFGNKNAIMLGDVLYSKAFYELSCLDVRLA-----QSVSSAVVRLSVGEIEDVKL 139 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 S + +E Y+ + KTA L AA E +++ G+ ++ + YG NLGIAFQ++DD Sbjct: 140 SLSFHTDKERYIRMCADKTAALIVAAAECGAILKGLNKNI---YRIYGENLGIAFQIIDD 196 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +LD + +GK DF+ GK TLP + ++ E++ Sbjct: 197 ILDITQDSQTLGKPSMSDFKEGKTTLPYMYLYEHLNADERS 237 >gi|50285865|ref|XP_445361.1| hypothetical protein [Candida glabrata CBS 138] gi|49524665|emb|CAG58267.1| unnamed protein product [Candida glabrata] Length = 471 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 88/293 (30%), Positives = 139/293 (47%), Gaps = 58/293 (19%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + + N+ +VL GDFLL +A + K+ Sbjct: 176 LAEIVEMIHTASLLHDDVIDYSDTRRGRPSGNVAFSNKMAVLAGDFLLGRATVAISRLKN 235 Query: 127 QEALEALSLVACTLAEGELRQL--------------------SLSKNLDVTEED------ 160 E +E +S L EGE QL SK L++ E D Sbjct: 236 PEVVELMSNSIANLVEGEFMQLKNMAVEDQPLVGSKNDKILPPPSKKLELKEHDYRVATP 295 Query: 161 ------------------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 YLH KTA L S + +++++G ++ V + S+G N+G Sbjct: 296 EATGSFSHEEVINIAFEYYLHKTYLKTAALISKSSRAAAILSGARDPVIEECYSFGRNIG 355 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR----GTKREKNFWKSTIN 258 I FQLVDD+LD+ ++GK G D + G T PV+ A++ G ++NF + Sbjct: 356 ICFQLVDDLLDFSVSAKDLGKPAGADLKLGIATAPVLFAWKEDPSLGPLIKRNFSEPG-- 413 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-CLPDSSWKKSL 310 +++K ++++ + T A Y KA +L+ LP+S + +L Sbjct: 414 -------DVEKTVKSVQDHDGVGKTMEFAKEYRNKALQNLKNALPESDCRSAL 459 >gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501] gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501] Length = 309 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/267 (30%), Positives = 129/267 (48%), Gaps = 18/267 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L L T ++ + + ACA+E IHT +L+HDD+ + Sbjct: 44 EKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAM 103 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL---------SLV 136 D+ RRGK+ V+G ++L GD LLS AF V L ++ Sbjct: 104 DNDDYRRGKLTNHKVYGEDIAILAGDALLSYAFEYVATQTCNVDFPNLIDVIARLGRTVG 163 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 A L G++ L DVT + + KT L ++ +++AG + + L Sbjct: 164 AAGLVGGQVLDLESEGRTDVTVDTLKFIHIHKTGALLETSVVSGAILAGAKPEDIERLSR 223 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y N+G+AFQ++DDVLD E+GK G+D R K T P + + K+ + Sbjct: 224 YAQNIGLAFQIIDDVLDVTASSEELGKTAGKDERAQKATYPSLWGLEESQKQAQALIDDA 283 Query: 257 I------NDGKISVENLKKAFIIMREN 277 I +E + + FI+ R+N Sbjct: 284 IAQLSPYGQAAQPLEAIAQ-FIVARKN 309 >gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505] gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505] Length = 309 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 116/222 (52%), Gaps = 12/222 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKR+RP+L LAT M+ + + ACA+E IHT +L+HDD+ + Sbjct: 43 ETIYEAMRYSLLAGGKRVRPILCLATCEMIGGTIEMAMPTACAMEMIHTMSLIHDDLPAM 102 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL---------- 135 D+ RRGK+ V+G ++L GD LL+ +F +V Q +L Sbjct: 103 DNDDYRRGKLTNHKVYGEDVAILAGDGLLALSFQLVATQTPQTVPPERTLRVIARMGSAS 162 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L+ +++ E + KTA L A++ +IAG Q L Sbjct: 163 GAPGLVGGQVVDLASEGQSNISLETLNFIHNHKTAALLEASVVCGGIIAGAAPQDIQKLT 222 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 Y N+G+AFQ++DD+LD ++GK G+D + K T P Sbjct: 223 RYSQNIGLAFQIIDDILDITATKEQLGKTAGKDIESAKVTYP 264 >gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102] gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102] Length = 310 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 76/239 (31%), Positives = 124/239 (51%), Gaps = 12/239 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKR+RP+L LAT M+ + + ACA+E IHT +L+HDD+ + Sbjct: 44 EKIYEAMRYSLLAGGKRVRPILCLATCEMMGGTIEMAMPTACAVEMIHTMSLIHDDLPAM 103 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALE---------ALSL 135 D+ RRGK+ V+G ++L GD LL+ AF +V ++T + E +L Sbjct: 104 DNDDYRRGKLTNHKVYGEDVAILAGDGLLALAFELVALKTPANVNRELTLQVIVRLGRAL 163 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L D++ E + + KT+ L A + +IAG Q L Sbjct: 164 GAAGLVGGQVVDLECEGKSDISLETLNFIHRHKTSALLEACVVSGGIIAGASTEDVQRLT 223 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 Y N+G+AFQ++DD+LD ++GK G+D + K T P + + + + K Sbjct: 224 RYAENIGLAFQIIDDILDITSTKEQLGKTAGKDQKAKKVTYPSLWGLEESRLKAQELVK 282 >gi|194227087|ref|XP_001496103.2| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 1 [Equus caballus] Length = 379 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 148/321 (46%), Gaps = 12/321 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + ++ +Y GK RP++ + A DN Sbjct: 62 LGWRDLKGLYEDIRKELLISTTELKEMSEYYFDGKGKAFRPIIVVLMARACNSHHDNSRD 121 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTA+L+HDDV+DD+ RRGK +WG + +VL GD +LS A Sbjct: 122 VQASQRSIALIAEMIHTASLVHDDVIDDARSRRGKHTVNKIWGEKKAVLAGDLILSAASI 181 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 182 ALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 241 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 242 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVL 301 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + G ++ +A + ++ + T Y A Y +A + Sbjct: 302 FACQQFPEMNAMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQRYCHEAVREIS 356 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S + +L+++ + L R Sbjct: 357 KLRPSPERDALIQLSEIVLTR 377 >gi|237744132|ref|ZP_04574613.1| dimethylallyltransferase [Fusobacterium sp. 7_1] gi|229431361|gb|EEO41573.1| dimethylallyltransferase [Fusobacterium sp. 7_1] Length = 297 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 126/237 (53%), Gaps = 23/237 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y I +GGKRLRP L T +L V A A+E IH+ +L+HDD+ + Sbjct: 30 ETIANGMEYAILNGGKRLRPFLLFVTLELLNEDIKKGVKSAIALEMIHSYSLVHDDLPAL 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------LVACT 139 D+ RRGK+ V+G +L+GD LL+ AF ++ SQ+ LE LS +++ T Sbjct: 90 DNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVL----SQKNLELLSSEQIVNIISKT 145 Query: 140 --------LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + S +K +D+ Y+H KT L +E++ +IA V+ Sbjct: 146 SEYAGINGMIGGQMIDIQSENKKIDLETLKYIH--SHKTGKLIKLPIEIACIIANVEKDK 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 R+ L+ Y +G+AFQ+ DD+LD G ++GK +G D K T P IL + K Sbjct: 204 REVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKK 260 >gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185] gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185] gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185] gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185] Length = 295 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 126/246 (51%), Gaps = 27/246 (10%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 LK++ + E + ++Y + +GGKRLRP+L +A A + G + CAIE IHT +L Sbjct: 24 LKKVPAYDETLEKAMEYSLMAGGKRLRPVLLMAAADAVGKDGAAFLTTGCAIEMIHTYSL 83 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +D+ RRGK V+G+ +VL GD LL+ AF +++ + A E L V Sbjct: 84 IHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLAGDALLTLAFEVMLRQEGA-APETLVTVV 142 Query: 138 CTLA----------------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++ EGE R+L L+ + H+ KT LF AA+ + Sbjct: 143 SEMSRAAGPYGMVGGQVLDLEGEGRRLDLAALRKI------HM--GKTGALFCAAIRSGA 194 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++AG + AL Y G+AFQ+ DD+LD G+ +GK +G D RN K T + + Sbjct: 195 ILAGAKEEELAALTLYAERFGLAFQITDDILDVTGDEAAIGKPVGSDVRNEKATYVTLTS 254 Query: 242 FQRGTK 247 + K Sbjct: 255 LEEAKK 260 >gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG'] Length = 303 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 142/273 (52%), Gaps = 20/273 (7%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L +K + +D + + ++Y + +GGKR+RP+L +A L+ + L +E IHT Sbjct: 27 LFVKELGTDYGTLAESMRYSLLAGGKRIRPVLAMAAMEALDRDPIPCIPLLAPLELIHTY 86 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------------IE 123 +L+HDD+ +DD +LRRGK +++G+ T++L GD LL+ AF ++ I Sbjct: 87 SLIHDDLPSMDDDSLRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDPDYDKLVSFEIR 146 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K L + + + ++ S K L+++ ++LH + KT L A+L + +L+ Sbjct: 147 LKIIHELSVGAGINGMVGGQQMDIASEGKALNLSSLEFLH--QHKTGALIRASLRIGALL 204 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +S + L YG +GIAFQ+ DD+LD G+ +GK +D K T P ++ Sbjct: 205 GKASSSDFERLDRYGQAVGIAFQIADDLLDVEGDAALLGKAAQKDQDRHKNTYPGLM--- 261 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 G ++ +N + +N+ ++ + + +RE Sbjct: 262 -GVEKARNMARHKLNEALEAIGSFGEKAKHLRE 293 >gi|157887530|emb|CAM98716.1| hypothetical protein [Plasmodiophora brassicae] Length = 376 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 100/325 (30%), Positives = 158/325 (48%), Gaps = 27/325 (8%) Query: 13 EKVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVL- 66 ++V+F+I + + ++ V K L SGGKRLRP L L A AL R + + Sbjct: 60 DRVSFVIDDVVSSFSGRLPLLASVSKLLFESGGKRLRPSLCLLMAGALSPARRDPSAAIG 119 Query: 67 ----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +A E IH A+LLHDDV+D + RR A + +G++ S+L GDFLLS++ ++ Sbjct: 120 PVDKVAQISEMIHVASLLHDDVLDGATTRRNTPTANVQFGDKASILGGDFLLSRSSIILA 179 Query: 123 ETKSQEALEALSLVACTLAEGELRQL------SLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 S EA+ ++ + L GE+ Q+ SLS L E YL KTA L + + Sbjct: 180 SLGSCEAVSLMATIISDLVSGEIMQMRPMNVGSLSDRL----EYYLSKSYRKTASLMANS 235 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++I + + ++ A +G LG+ FQL DD+LD G +GK G D G T Sbjct: 236 CRTVAVIDDLSSDLQNAAMDFGKYLGLCFQLTDDLLDITGTDKSLGKPSGLDLSTGVATA 295 Query: 237 PVILAFQRGTKREKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 PV+ A ++ + + K S V ++ A +R + + T S A Sbjct: 296 PVLFAAEQYPELNDMMGR------KFSEVGDVDNALEFIRLSDGIERTRELIRSLAAMAC 349 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320 +L P S ++ SL+ +VD ++R Sbjct: 350 QALDPFPTSVFRDSLVVLVDNIIKR 374 >gi|119356223|ref|YP_910867.1| polyprenyl synthetase [Chlorobium phaeobacteroides DSM 266] gi|119353572|gb|ABL64443.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Chlorobium phaeobacteroides DSM 266] Length = 332 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/290 (26%), Positives = 142/290 (48%), Gaps = 3/290 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 KY++ GKR+RP LTL + + ++ + +A A+E +H TL+HDD++D + LR G Sbjct: 41 AKYILDGKGKRIRPFLTLLASEAVCGSSEHALKVALAVEILHNFTLMHDDIMDQAELRHG 100 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV---ACTLAEGELRQLSL 150 + W ++L GD +++ A+ + +++ S +E + ++ T+ EG+ + L Sbjct: 101 RPTVHKQWNANVAILSGDMMIAYAYELALQSPSSRQIELVHILNDANITICEGQALDIEL 160 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + T DYL +I K+ L SAALE + + L ++G +G AFQ+ DD Sbjct: 161 EEKKHATIADYLDMIAKKSGRLISAALEAGGVAGNATDEQLNNLVTFGEKIGRAFQIQDD 220 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 LD + + GK G D NGK T ++ + + + + +S I + IS E + + Sbjct: 221 FLDIMADDGKSGKIAGGDVINGKKTYLLLRSIELTSGDDHRLLQSIIENNGISAERVPEI 280 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 I + L +T + A ++ LP + ++ L + ++R Sbjct: 281 RSIYQRCGVLDETRLLIRRDTENALSAVDKLPHAEGREYLKGFANILVKR 330 >gi|215405436|ref|ZP_03417617.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis 02_1987] gi|289747226|ref|ZP_06506604.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289687754|gb|EFD55242.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length = 359 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 118/233 (50%), Gaps = 13/233 (5%) Query: 26 DVEMIPDVVKYLIFSG----------GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 D M P V +L +S GK +RP L A + + A ++E +H Sbjct: 46 DPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADPHSAIPGAVSVELVH 105 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEA 132 +L+HDD++D RR + +WG+ ++L GD +LS A ++++ S AL A Sbjct: 106 NFSLVHDDLMDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRA 165 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +S L G+ + DV ++ L + + KTA L +A+ EV +L+AG SVR+ Sbjct: 166 ISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVRE 225 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL +YG ++G+AFQLVDD+L G GK + D R+ K TLPV G Sbjct: 226 ALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHG 278 >gi|157736647|ref|YP_001489330.1| octaprenyl-diphosphate synthase [Arcobacter butzleri RM4018] gi|157698501|gb|ABV66661.1| octaprenyl-diphosphate synthase [Arcobacter butzleri RM4018] Length = 299 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/285 (28%), Positives = 147/285 (51%), Gaps = 20/285 (7%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 + GK LR L L A + + + L +E IH A+LLHDDV+D++ RRG+ + Sbjct: 30 LATGKMLRSKLILKIAGI----NEESIKLCAIVEMIHAASLLHDDVIDEADTRRGQPSVN 85 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 ++ N+TS++ GD L S+AF + + + A +S L+ GE+ + L+++ + + Sbjct: 86 ALYDNKTSIMFGDILYSRAFTELSQMDKRVAYH-ISNAVTLLSIGEMMDVDLTQSFNTSY 144 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 YL +I KTA L A+ ++++ + + +YG NLG+AFQ++DD+LD + Sbjct: 145 TKYLDMIYKKTASLIEASARSAAILVNLD---EEKYATYGKNLGLAFQMIDDILDITQDS 201 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQR---GTKREKNFWKSTINDGKISVENLKKAFIIMR 275 +GK DF GK T+P + ++R TK E + K D + ++ ++ Sbjct: 202 KTLGKPAMLDFVEGKVTIPYLYLYERVEDKTKLESLYKKELSEDESLWIKEQ------LK 255 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +AL D+ A S G A + + D ++L++++ ++R Sbjct: 256 ITKALEDSILEAKSIGNSA---IEAVKDEENSQTLVQIMKAMIER 297 >gi|315635812|ref|ZP_07891074.1| polyprenyl synthetase [Arcobacter butzleri JV22] gi|315479791|gb|EFU70462.1| polyprenyl synthetase [Arcobacter butzleri JV22] Length = 299 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/285 (28%), Positives = 147/285 (51%), Gaps = 20/285 (7%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 + GK LR L L A + + + L +E IH A+LLHDDV+D++ RRG+ + Sbjct: 30 LATGKMLRSKLILKIAGI----NEESIKLCAIVEMIHAASLLHDDVIDEADTRRGQPSVN 85 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 ++ N+TS++ GD L S+AF + + + A +S L+ GE+ + L+++ + + Sbjct: 86 ALYDNKTSIMFGDILYSRAFTELSQMDKRVAYH-ISNAVTLLSIGEMMDVDLTQSFNTSY 144 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 YL +I KTA L A+ ++++ + + +YG NLG+AFQ++DD+LD + Sbjct: 145 TKYLDMIYKKTASLIEASARSAAILVNLD---EEKYATYGKNLGLAFQMIDDILDITQDS 201 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQR---GTKREKNFWKSTINDGKISVENLKKAFIIMR 275 +GK DF GK T+P + ++R TK E + K D + ++ ++ Sbjct: 202 KTLGKPAMLDFVEGKVTIPYLYLYERVEDKTKLESLYKKELSEDESLWIKEQ------LK 255 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +AL D+ A S G A + + D ++L++++ ++R Sbjct: 256 ITKALEDSILEAKSIGNSA---IEAVKDEENSQTLVQIMKAMIER 297 >gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter sp. Re1] gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter sp. Re1] Length = 296 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 12/225 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD--VVDDSA 89 + + Y SGGKRLRP++ + A + + + AC IE IHT +L+HDD V+D+ Sbjct: 35 EAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPVMDNDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV----ACTLAEGEL 145 RRGK ++G+ ++L GD LL+ AF + + + ++V +LA G Sbjct: 95 FRRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSKISGINPDAVVDVIEKVSLAAGGY 154 Query: 146 RQLS------LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + ++ DV+ + ++ KT L S + + +AG + +K +G Sbjct: 155 GMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVSFWSGARLAGASKEDLETIKCFGE 214 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+ FQ+VDD+LD +G +GK +G D +N K T + F + Sbjct: 215 KLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKKNTFVNLFGFNK 259 >gi|215432365|ref|ZP_03430284.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis EAS054] gi|289755528|ref|ZP_06514906.1| dimethylallyltransferase + geranyltranstransferase [Mycobacterium tuberculosis EAS054] gi|289696115|gb|EFD63544.1| dimethylallyltransferase + geranyltranstransferase [Mycobacterium tuberculosis EAS054] Length = 359 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 118/233 (50%), Gaps = 13/233 (5%) Query: 26 DVEMIPDVVKYLIFSG----------GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 D M P V +L +S GK +RP L A + + A ++E +H Sbjct: 46 DPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADPHSAIPGAVSVELVH 105 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEA 132 +L+HDD++D RR + +WG+ ++L GD +LS A ++++ S AL A Sbjct: 106 NFSLVHDDLMDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRA 165 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +S L G+ + DV ++ L + + KTA L +A+ EV +L+AG SVR+ Sbjct: 166 ISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVRE 225 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL +YG ++G+AFQLVDD+L G GK + D R+ K TLPV G Sbjct: 226 ALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHG 278 >gi|50309433|ref|XP_454724.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643859|emb|CAG99811.1| KLLA0E17183p [Kluyveromyces lactis] Length = 477 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 96/346 (27%), Positives = 153/346 (44%), Gaps = 58/346 (16%) Query: 28 EMIPDVVKYL-IFSGGKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLH 81 E +P + L I G K L P+ L E+ +L LA +E IHTA+LLH Sbjct: 135 ENVPASISPLHILHGIKPLNPLTKGPEPLPQEFDRARGILPKQRRLAEIVEMIHTASLLH 194 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DDV+D S RRG+ + + + N+ +VL GDF+L +A + ++ E +E +S L Sbjct: 195 DDVIDHSDTRRGRPSGNIAFTNKMAVLAGDFMLGRATVAISRLRNPEVVELVSNSIANLV 254 Query: 142 EGELRQL--------------------SLSKNLDVTEEDY-------------------- 161 EGE QL ++TE +Y Sbjct: 255 EGEFMQLKNTAIDADHTTFNNGTQHIPPPPTKFELTEHEYRVPTSSTTNGTQLSHDQLVD 314 Query: 162 ------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 LH KTA L S + +++++GV++ + + +G NLGI FQLVDD+LD+ Sbjct: 315 MAFDYYLHKTYLKTAALISKSCRAAAVLSGVRDPIIEECYEFGKNLGICFQLVDDMLDFT 374 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 ++GK G D G T PV+ A++ ++ N G + + A + ++ Sbjct: 375 ISAKDLGKPAGADLELGIATAPVLFAWREDPSLGPLIKRNFSNPGDV-----EAAALAVK 429 Query: 276 ENRALVDTEYRAYSYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQR 320 + + T A Y KA +LR LP+S + +L + + L R Sbjct: 430 KYDGVGKTNELAKDYCNKALQNLRNGLPNSDARSALEFLTNSVLTR 475 >gi|291191909|gb|ADD83016.1| PtnT4 [Streptomyces platensis] Length = 348 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 109/208 (52%), Gaps = 2/208 (0%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 SGGK +R LT+ A V A A+E +H +LLHDDV+D RRG+ Sbjct: 63 SGGKMIRAALTILAAEACGGDAQQAVPGAAAVELVHNFSLLHDDVMDHDLERRGRPTVWS 122 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALSLVACTLAEGELRQLSLSKNLDVT 157 +G ++L GD LL++A M E + A +AL LA G++ L+L + VT Sbjct: 123 KFGTPAAILAGDILLARACGMFDEASGHQGWATKALIDAIAELAAGQMADLALERRATVT 182 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L V + KTA L A + + + G ++ + ++GM+LG+AFQLVDDVL G+ Sbjct: 183 LEEALTVSEQKTAALLRCACTLGAGLVGAPDATSRRFGAFGMHLGMAFQLVDDVLGIWGD 242 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK + D N K ++PV+ A G Sbjct: 243 PAVTGKPVRSDLHNKKKSIPVVAALNSG 270 >gi|299537767|ref|ZP_07051056.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1] gi|298726746|gb|EFI67332.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1] Length = 293 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 86/287 (29%), Positives = 147/287 (51%), Gaps = 30/287 (10%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +E+ F ++++I + ++ ++ Y + +GGKR+RP+ LA + + +++ I Sbjct: 16 IEETMFSLVEQIDAPADLKESML-YSLKAGGKRIRPLFVLAVLELYRENLQDGLIVGSVI 74 Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-----VIET 124 E IHT +L+HDD+ +D+ RRGK V+G + L GD L + AF + + Sbjct: 75 EIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFGILARMDIAAE 134 Query: 125 KSQEALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 K E ++ LS+ A EGE RQL+L+ E + +HV +KT L Sbjct: 135 KRIELVQLLSIAAGAEGMVGGQVLDMEGEQRQLNLA------ELEQVHV--NKTGALLRF 186 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++E +++A V R LK Y ++G+AFQ+ DD+LD G E+GK G+D + K T Sbjct: 187 SIEAGAVLADVSAQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVASDKST 246 Query: 236 LPVILAFQRGTKREKNFWKSTIN---DGKISVENLK--KAFIIMREN 277 P +L + ++ ++ IN I V L+ A+I+ R+N Sbjct: 247 YPALLTLEGAKEKLAEHYQHAINALDQLPIDVSLLRDFAAYIVHRKN 293 >gi|258512777|ref|YP_003186211.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479503|gb|ACV59822.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 337 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 23/266 (8%) Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A AIE++H +L+HDD+ D S LRRG+ + VWG ++ GD L + AF ++ + Sbjct: 80 AVAIEYVHGFSLIHDDIEDRSPLRRGRASLWAVWGVDRALNAGDALFALAFRVMGDLADH 139 Query: 128 -------EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 E +A++ L+ G+ L+ + +V+ E YL + + KT LF AALEV+ Sbjct: 140 FDARWVVETYQAMTDACIALSAGQELDLAFEQVENVSIEQYLAMAELKTGALFGAALEVA 199 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG SVR L++ G LG+ FQ++DD D G ++GK +D K TLPV+L Sbjct: 200 AILAGQPPSVRDDLRNAGRKLGVLFQILDDFHDLFGREEDLGKPTAQDALRRKKTLPVVL 259 Query: 241 AFQRGTKREKNF---WKSTINDGKISVENLKKAFI---IMRENRALVDTEYRAYSYGQKA 294 G R++ F W+ + D + + +L+ + I+RE A+ E R + Q Sbjct: 260 ----GLSRDREFAEMWR-CLRDNQEMLPHLRARLVTDSILREAIAI---EERVRAELQHR 311 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320 + R +WK ++E + +QR Sbjct: 312 ME--RAPFVDAWKPEMLETIHRLVQR 335 >gi|15842992|ref|NP_338029.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31794579|ref|NP_857072.1| multifunctional dimethylallyltransferase/farnesyl diphosphate synthetase/ farnesyltranstransferase [Mycobacterium bovis AF2122/97] gi|57117104|ref|YP_177970.1| multifunctional dimethylallyltransferase/farnesyl diphosphate synthetase/ farnesyltranstransferase [Mycobacterium tuberculosis H37Rv] gi|121639323|ref|YP_979547.1| putative multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663262|ref|YP_001284785.1| putative multifunctional geranylgeranyl pyrophosphate synthetase IdsA1 [Mycobacterium tuberculosis H37Ra] gi|148824606|ref|YP_001289360.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis F11] gi|167968716|ref|ZP_02550993.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis H37Ra] gi|215413305|ref|ZP_03421990.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis 94_M4241A] gi|215428901|ref|ZP_03426820.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis T92] gi|215447727|ref|ZP_03434479.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis T85] gi|218755177|ref|ZP_03533973.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis GM 1503] gi|219559472|ref|ZP_03538548.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis T17] gi|224991820|ref|YP_002646509.1| putative multifunctional geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800445|ref|YP_003033446.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN 1435] gi|254234000|ref|ZP_04927325.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 : dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis C] gi|254366010|ref|ZP_04982055.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 : dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis str. Haarlem] gi|254552504|ref|ZP_05142951.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188455|ref|ZP_05765929.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis CPHL_A] gi|260202524|ref|ZP_05770015.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T46] gi|260206765|ref|ZP_05774256.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis K85] gi|289444945|ref|ZP_06434689.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T46] gi|289449096|ref|ZP_06438840.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis CPHL_A] gi|289555674|ref|ZP_06444884.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN 605] gi|289571635|ref|ZP_06451862.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T17] gi|289576131|ref|ZP_06456358.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis K85] gi|289752116|ref|ZP_06511494.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T92] gi|289759559|ref|ZP_06518937.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289763581|ref|ZP_06522959.1| dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis GM 1503] gi|294995828|ref|ZP_06801519.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis 210] gi|297636060|ref|ZP_06953840.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN 4207] gi|297733060|ref|ZP_06962178.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN R506] gi|298526881|ref|ZP_07014290.1| dimethylallyltransferase/geranyltranstransferase/farnesyltranstrans ferase [Mycobacterium tuberculosis 94_M4241A] gi|306777739|ref|ZP_07416076.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu001] gi|306782466|ref|ZP_07420803.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu002] gi|306786286|ref|ZP_07424608.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu003] gi|306790656|ref|ZP_07428978.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu004] gi|306795183|ref|ZP_07433485.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu005] gi|306799374|ref|ZP_07437676.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu006] gi|306805221|ref|ZP_07441889.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu008] gi|306809406|ref|ZP_07446074.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu007] gi|306969512|ref|ZP_07482173.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu009] gi|306973857|ref|ZP_07486518.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu010] gi|307081569|ref|ZP_07490739.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu011] gi|307086177|ref|ZP_07495290.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu012] gi|313660391|ref|ZP_07817271.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN V2475] gi|61224677|sp|P0A5H8|GGPPS_MYCTU RecName: Full=Probable geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|61224678|sp|P0A5H9|GGPPS_MYCBO RecName: Full=Probable geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|13883332|gb|AAK47843.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31620176|emb|CAD95619.1| PROBABLE MULTIFUNCTIONAL GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA1 (GGPP SYNTHETASE) (GGPPSASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE): DIMETHYLALLYLTRANSFERASE (PRENYLTRANSFERASE) (GERANYL-DIPHOSPHATE SYNTHASE) + GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE) (FARNESYL-PYROPHOSPHATE SYNTHETASE) (FARNESYL DIPHOSPHATE SYNTHETASE) (FPP SYNTHETASE) + FARNESYLTRANSTRANSFERASE (GERANYLGERANYL-DIPHOSPHATE SYNTHASE) [Mycobacterium bovis AF2122/97] gi|38490369|emb|CAE55595.1| PROBABLE MULTIFUNCTIONAL GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA1 (GGPP SYNTHETASE) (GGPPSASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE): DIMETHYLALLYLTRANSFERASE (PRENYLTRANSFERASE) (GERANYL-DIPHOSPHATE SYNTHASE) + GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE) (FARNESYL-PYROPHOSPHATE SYNTHETASE) (FARNESYL DIPHOSPHATE SYNTHETASE) (FPP SYNTHETASE) + FARNESYLTRANSTRANSFERASE (GERANYLGERANYL-DIPHOSPHATE SYNTHASE) [Mycobacterium tuberculosis H37Rv] gi|121494971|emb|CAL73457.1| Probable multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599529|gb|EAY58633.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 : dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis C] gi|134151523|gb|EBA43568.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 : dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis str. Haarlem] gi|148507414|gb|ABQ75223.1| putative multifunctional geranylgeranyl pyrophosphate synthetase IdsA1 [Mycobacterium tuberculosis H37Ra] gi|148723133|gb|ABR07758.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis F11] gi|224774935|dbj|BAH27741.1| putative multifunctional geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321948|gb|ACT26551.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN 1435] gi|289417864|gb|EFD15104.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T46] gi|289422054|gb|EFD19255.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis CPHL_A] gi|289440306|gb|EFD22799.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN 605] gi|289540562|gb|EFD45140.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis K85] gi|289545389|gb|EFD49037.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T17] gi|289692703|gb|EFD60132.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T92] gi|289711087|gb|EFD75103.1| dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis GM 1503] gi|289715123|gb|EFD79135.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|298496675|gb|EFI31969.1| dimethylallyltransferase/geranyltranstransferase/farnesyltranstrans ferase [Mycobacterium tuberculosis 94_M4241A] gi|308213915|gb|EFO73314.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu001] gi|308324859|gb|EFP13710.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu002] gi|308329115|gb|EFP17966.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu003] gi|308332952|gb|EFP21803.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu004] gi|308336511|gb|EFP25362.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu005] gi|308340388|gb|EFP29239.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu006] gi|308344247|gb|EFP33098.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu007] gi|308348237|gb|EFP37088.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu008] gi|308352963|gb|EFP41814.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu009] gi|308356785|gb|EFP45636.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu010] gi|308360733|gb|EFP49584.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu011] gi|308364344|gb|EFP53195.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu012] gi|323717885|gb|EGB27074.1| multifunctional geranylgeranyl pyrophosphate synthetase id [Mycobacterium tuberculosis CDC1551A] gi|326905242|gb|EGE52175.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis W-148] gi|328460177|gb|AEB05600.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN 4207] Length = 359 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 118/233 (50%), Gaps = 13/233 (5%) Query: 26 DVEMIPDVVKYLIFSG----------GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 D M P V +L +S GK +RP L A + + A ++E +H Sbjct: 46 DPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADPHSAIPGAVSVELVH 105 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEA 132 +L+HDD++D RR + +WG+ ++L GD +LS A ++++ S AL A Sbjct: 106 NFSLVHDDLMDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRA 165 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +S L G+ + DV ++ L + + KTA L +A+ EV +L+AG SVR+ Sbjct: 166 ISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVRE 225 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 AL +YG ++G+AFQLVDD+L G GK + D R+ K TLPV G Sbjct: 226 ALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHG 278 >gi|312877544|ref|ZP_07737504.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311795685|gb|EFR12054.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 299 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 137/246 (55%), Gaps = 15/246 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVL-LACAIEFIHTATLLHDDV 84 E+I ++Y +F+GGKRLRP+L L + ML + D +L +A AIE IHT +L+HDD+ Sbjct: 31 EIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQEVDQKILDIASAIELIHTYSLIHDDL 90 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA--FCM--VIETKSQEAL--EALSLV 136 +D+ LRRGK +V+G ++L GD LL+ A CM ++ ++ L A L Sbjct: 91 PAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWILRCGCEKNLVKAAKYLF 150 Query: 137 ACTLAEGELRQLSL---SKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQ 192 + EG + + + D+ E+ L + KT+ L A+ +L+AG +N V Sbjct: 151 WSSGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQASCVCGALVAGAENDVVS 210 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 ++ +G NLG+AFQ+ DD+LD G+ ++GK+IG+D + K T ++ + +++ Sbjct: 211 DMEEFGKNLGLAFQIRDDILDVIGDSKKVGKSIGKDIKEKKNTFVTFYGLEKAQQLVEHY 270 Query: 253 WKSTIN 258 + I+ Sbjct: 271 SQKAID 276 >gi|116617356|ref|YP_817727.1| geranylgeranyl pyrophosphate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096203|gb|ABJ61354.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 332 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 90/291 (30%), Positives = 149/291 (51%), Gaps = 13/291 (4%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 S GK +RP LTL + + + + ++L +IE +H ATL+HDD++D+S LRRG+ + + Sbjct: 47 SAGKLVRPALTLLFSELTDAPYNQKAIVLGASIELLHLATLIHDDIIDESKLRRGQDSIQ 106 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQE----ALEALSLVACTLAEGELRQLSLSKNL 154 +G T+V GD+LL+ ++ + + + ALE+L + GEL Q Sbjct: 107 AHFGKDTAVYAGDYLLTGMLSLLNDADNIQANKLALESLRNILF----GELTQKHNRYLT 162 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIA-GVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 D + ++YL I KTA LF ++ + + GV + + + G NLGIAFQL+DD LD Sbjct: 163 DTSFDNYLTQITGKTAALFKLSVLFGATSSDGVSSQLLDVVGKLGENLGIAFQLLDDYLD 222 Query: 214 YRG--EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 + E +GK G+D RNG T P++ A + + + DG I+ + L Sbjct: 223 FESITEQLSLGKPAGQDIRNGIYTAPILFALENPDINAELKELLALRDG-ITDDQLVHIH 281 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 ++ E+ A+ Y Q+ D L LP+++ ++ L + L R N Sbjct: 282 NVVLESDAMSRLNSLLAEYSQELDDLLNKLPNNALRQKLSHLATLLLNRKN 332 >gi|73948851|ref|XP_849908.1| PREDICTED: similar to trans-prenyltransferase [Canis familiaris] Length = 365 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 143/298 (47%), Gaps = 12/298 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNHVL-----LACAIEFIHTATLLHD 82 + ++ +Y GK RP++ +A A + + V +A E IHTA+L+HD Sbjct: 71 LKEMSEYYFDGKGKAFRPIIVVLMARACNIHHSNSRDVQASQRSIALIAEMIHTASLVHD 130 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+DD++ RRGK +WG + +VL GD +LS A + + + L+ V L Sbjct: 131 DVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASMALARIGNTTVISILTQVIEDLVR 190 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE QL +N + YL KTA L + + + S++ V + YG N+G Sbjct: 191 GEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVG 250 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 IAFQL+DDVLD+ ++MGK D + G T PV+ A Q+ + + G Sbjct: 251 IAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPG-- 308 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ +A + ++ + T Y A Y +A + L S+ + +L+++ + L R Sbjct: 309 ---DVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLRPSAERDALIQLSEIVLTR 363 >gi|66363140|ref|XP_628536.1| long chain fatty acyl diphosphate synthase [Cryptosporidium parvum Iowa II] gi|46229548|gb|EAK90366.1| long chain fatty acyl diphosphate synthase [Cryptosporidium parvum Iowa II] Length = 466 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/270 (31%), Positives = 142/270 (52%), Gaps = 41/270 (15%) Query: 27 VEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYR---------GDNHVLLACAIEF 73 +E IP D+VKY+ S GK R A +L++ G +H +L +I+ Sbjct: 131 LEFIPNEMKDIVKYVFQSEGKLTRQNYLSALVGLLKFAIGVNHSQPIGLDHRMLIHSIQL 190 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IH+A+LLHDD++D+S +RRGK A ++GN+ ++L+GD+L S++ + ++ A++ + Sbjct: 191 IHSASLLHDDILDNSEIRRGKKAPYKIFGNKKTILLGDYLFSKSCLNISIIENINAMKCI 250 Query: 134 SLVACTLAEGELRQL----SLSKNLDVTE----------EDYLHVIKSKTAVLFS-AALE 178 S++A L +GE QL SL + L+ ++ E YL KTA LFS + Sbjct: 251 SIIAENLVKGEFSQLNGLGSLIEGLNNSKDKKGLVGNYFEKYLLKSYYKTASLFSFGGIA 310 Query: 179 VSSLI-AGVQNSVRQALKSY----GMNLGIAFQLVDDVLDYRGEVNEM--GKNIGEDFRN 231 S L+ N +R + Y G+N G+AFQL+DD+LD+ ++++ GK D + Sbjct: 311 CSELLKKAYGNKLRMEMIIYSYYMGLNFGLAFQLMDDILDFTNSISQVNSGKPFFNDIKQ 370 Query: 232 GKPTLPVILAFQRGTKR------EKNFWKS 255 G T+P+ R +R NF+ S Sbjct: 371 GILTIPIYFLLLRDQERATKILVNTNFYNS 400 >gi|19704662|ref|NP_604224.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714968|gb|AAL95523.1| Dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 297 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/256 (32%), Positives = 134/256 (52%), Gaps = 27/256 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I ++Y I +GGKRLRP L T +L + V A A+E IH+ +L+HDD+ + Sbjct: 30 ETIAKGMEYAILNGGKRLRPFLLFVTLELLNENINKGVKSAIALEMIHSYSLVHDDLPAL 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------LVACT 139 D+ RRGK+ V+G +L+GD LL+ AF ++ SQ+ LE LS +++ T Sbjct: 90 DNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVL----SQKNLELLSSKQIVNIISKT 145 Query: 140 --------LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + S +K +D+ Y+H KT L +E++ +IA ++ Sbjct: 146 SEYAGIDGMIGGQMIDIQSENKKIDLETLKYIH--SHKTGKLIKLPIEIACIIANLEKDK 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+ L+ Y +G+AFQ+ DD+LD G ++GK +G D K T P IL G + K Sbjct: 204 REVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSIL----GMEESK 259 Query: 251 NFWKSTINDGKISVEN 266 +T+ K ++N Sbjct: 260 KILNNTVEKAKEIIKN 275 >gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter tengcongensis MB4] gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter tengcongensis MB4] Length = 294 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 127/242 (52%), Gaps = 12/242 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E+I + ++Y +F+GGKRLRP+L L+ +L + +AC+IE IHT +L+HDD+ + Sbjct: 28 EIIYEAMRYSVFAGGKRLRPVLCLSACELLGGDLKKALPVACSIELIHTYSLIHDDLPAM 87 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----------ETKSQEALEALSL 135 D+ LRRGK V+G ++L GD LL+ + ++I E + A E + Sbjct: 88 DNDDLRRGKPTNHKVFGEAIAILAGDGLLNLGYEVLIRHALENPEDYEKILKAANEIATA 147 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 C G + LS+N ++T E+ ++ + KTA L A++ + +AG + L+ Sbjct: 148 SGCKGIIGGQVEDILSQNTELTYEELKYIHEHKTAALIEASVCAGAHMAGASEKEVELLR 207 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y +G+AFQ+ DD+LD G+ +GK +G D GK T I ++ + K Sbjct: 208 EYAGLIGLAFQIKDDILDVIGDEKTLGKKVGSDREKGKFTFVNIFGVEKSQEMVKELTDE 267 Query: 256 TI 257 I Sbjct: 268 AI 269 >gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 299 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 136/246 (55%), Gaps = 15/246 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVL-LACAIEFIHTATLLHDDV 84 E+I ++Y +F+GGKRLRP+L L + M+ D +L +A AIE IHT +L+HDD+ Sbjct: 31 EIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQIVDEKILDIASAIELIHTYSLIHDDL 90 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA--FCM--VIETKSQEAL--EALSLV 136 +D+ LRRGK +V+G ++L GD LL+ A CM ++ +E L A L Sbjct: 91 PAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWILRYGCRENLIKAAKYLF 150 Query: 137 ACTLAEGELRQLSL---SKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQ 192 + EG + + + D+ E+ L + KT+ L A+ +L+AG ++ V Sbjct: 151 WASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVS 210 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+ YG NLG+AFQ+ DDVLD G+ ++GK+IG+D + K T ++ + +++ Sbjct: 211 DLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGKDIKEKKNTFVTFYGLEKAQQLVEHY 270 Query: 253 WKSTIN 258 + I+ Sbjct: 271 SQKAID 276 >gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase [Deferribacter desulfuricans SSM1] gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase [Deferribacter desulfuricans SSM1] Length = 300 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 137/262 (52%), Gaps = 20/262 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y IF+GGKRLRP+L ++ + E D A A+E +HT +L+HDD+ LR Sbjct: 40 MRYSIFAGGKRLRPVLIYSSYGIFESYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLR 99 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET------KSQEALEALSLVACT-----L 140 RGK ++G T++L GD LL+ AF ++++ ++ LEA +A + + Sbjct: 100 RGKPTNHKMFGEATAILAGDALLTLAFEIMLDKDINKDIPTETILEAAFKLAKSAGYKGM 159 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ + + +K +D D++H K KTA L S E+ +++ +Q L +G Sbjct: 160 VGGQYADIINENKEIDKNTLDFIH--KHKTAALISYCCELGAILGFADEKDKQNLAEFGE 217 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN- 258 +G+AFQ+VDD+LD E+GKN G D +N K T P I ++ ++ S IN Sbjct: 218 KIGLAFQIVDDILDITSTTEELGKNAGSDLKNKKATYPEIYGLEKSKSIAEDLINSAINI 277 Query: 259 ---DGKISVENLKKAFIIMREN 277 GK + ++ A I++ N Sbjct: 278 LKPYGKAATPLIEIANYILKRN 299 >gi|227500381|ref|ZP_03930443.1| possible trans-hexaprenyltranstransferase [Anaerococcus tetradius ATCC 35098] gi|227217444|gb|EEI82763.1| possible trans-hexaprenyltranstransferase [Anaerococcus tetradius ATCC 35098] Length = 330 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/278 (28%), Positives = 140/278 (50%), Gaps = 12/278 (4%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 ++EDL ++ +++ K I D + + D++K + S GK +R L + +LM E Sbjct: 14 LIEDLVIEIHQEI-----KNILGDYKSSQNLYDIIKDALRSSGKMIRTKLLICISLMGEE 68 Query: 60 RGDNHVLLACA-IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + ++ CA +E H A+L+HDD++DDS LRR + + +G +V GD+++++ F Sbjct: 69 EISDKIISQCAAVEITHLASLIHDDIIDDSTLRRSHKSTQAKYGKDVAVFAGDYMIAKVF 128 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 + + E + ++ + GE+ Q ++V+ ++Y I KTA F Sbjct: 129 SYLAKKGYVEEISVIADTIRDMCNGEVGQNLNKYKINVSTDEYFENISGKTASFFKTVCY 188 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 S G + + +G NLG+ FQL DD+LD E GK D R G T P+ Sbjct: 189 FGSKNCGFDRKDTEKMVRFGQNLGLMFQLKDDLLDLFSEKALTGKEEFSDLREGIYTYPI 248 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 ILA Q + K+ + + + + S++ KK F+I+R+ Sbjct: 249 ILALQ-NEEYGKDIYDILVKNRQTSLD--KKDFLILRD 283 >gi|114320106|ref|YP_741789.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1] gi|114226500|gb|ABI56299.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1] Length = 306 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 26/260 (10%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDV--VDD 87 ++Y SGGKRLRP+L AT L G LL ACA+E IH +L+HDD+ +DD Sbjct: 45 AMRYSALSGGKRLRPILVFATGQAL---GAAPTLLDGPACAVECIHAYSLIHDDLPAMDD 101 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEALSLVACT 139 LRRG+ + T++L GD L + AF ++ +E L+L A + Sbjct: 102 DELRRGQPTCHKAFDEATAILAGDALQTLAFHILAHDPGGVQNSRARLRMVEVLALAAGS 161 Query: 140 --LAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALK 195 +A G+ L+ + + LDV + + +H+ KT L A++++ +L A V + Q L Sbjct: 162 RGMAGGQAIDLAATGQQLDVAQLEDMHI--HKTGALIRASVQLGALAASPVDEELLQRLD 219 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 YG +G+AFQ+ DD+LD GE +GK G D R K T P +L G + + Sbjct: 220 HYGKCIGLAFQIRDDILDVEGETEALGKARGSDQRQAKATYPALL----GMREARETADR 275 Query: 256 TINDGKISVENLKKAFIIMR 275 + D S+E L ++ ++R Sbjct: 276 LVEDALESLEGLDQSADVLR 295 >gi|282855260|ref|ZP_06264592.1| polyprenyl synthetase [Propionibacterium acnes J139] gi|282581848|gb|EFB87233.1| polyprenyl synthetase [Propionibacterium acnes J139] gi|314924082|gb|EFS87913.1| polyprenyl synthetase [Propionibacterium acnes HL001PA1] gi|314965044|gb|EFT09143.1| polyprenyl synthetase [Propionibacterium acnes HL082PA2] gi|314983126|gb|EFT27218.1| polyprenyl synthetase [Propionibacterium acnes HL110PA3] gi|315090668|gb|EFT62644.1| polyprenyl synthetase [Propionibacterium acnes HL110PA4] gi|315093825|gb|EFT65801.1| polyprenyl synthetase [Propionibacterium acnes HL060PA1] gi|315104041|gb|EFT76017.1| polyprenyl synthetase [Propionibacterium acnes HL050PA2] gi|327326484|gb|EGE68273.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL103PA1] Length = 324 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/307 (27%), Positives = 147/307 (47%), Gaps = 17/307 (5%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI-EFIHTATL 79 ++ +D + + ++I +GGKR RP+L + + + D ++ A + E H A+L Sbjct: 26 RQAGADTPFVTEAANHIISAGGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASL 85 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 HDDV+D+++ RRG +A L WGN +++VGD+L S+A V E ++ + L A T Sbjct: 86 YHDDVMDEASRRRGAPSANLRWGNSVAIMVGDYLFSRASLAVAEL----GVDFVKLQART 141 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L +G++ + YL V+ KT L +A+ ++++ AL+ Sbjct: 142 FSRLVQGQIAETRGPSQGQDPLAHYLKVVADKTGSLIAASAVFGAMVSHASAENVAALEQ 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL--AFQRGTKRE-KNFW 253 +G ++G FQL DD++D + GK G D R PTLP +L A E K Sbjct: 202 FGEDIGEVFQLADDLIDITSTMT--GKTPGTDLREKVPTLPTLLLRASDDPADAELKEML 259 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + ++D + + L K +R N + + +A+ L LPD K++L + Sbjct: 260 DADLSDDAVLSDVLDK----LRTNHVIDEARVEIQRRADRARTHLTPLPDGDAKQALEAL 315 Query: 314 VDFCLQR 320 D + R Sbjct: 316 CDEVVSR 322 >gi|256853573|ref|ZP_05558938.1| polyprenyl synthetase [Enterococcus faecalis T8] gi|256710516|gb|EEU25559.1| polyprenyl synthetase [Enterococcus faecalis T8] gi|315028578|gb|EFT40510.1| polyprenyl synthetase [Enterococcus faecalis TX4000] Length = 326 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 9/295 (3%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFI 74 LI + + + E I + + L SGGK LRP L L E + + LL A ++E + Sbjct: 21 LIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEAL 133 H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ + E ++ Sbjct: 81 HMATLIHDDIIDDSPLRRGTVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNGSEFMKIN 140 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L GEL Q+S + ++ YL + KTA LFS + + V++ Sbjct: 141 AQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRL 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q + + Sbjct: 201 AKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQAA----PDVF 256 Query: 254 KSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ G+ I++E + ++ + + + + A KA ++ LPD + K Sbjct: 257 SPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAK 311 >gi|148826941|ref|YP_001291694.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittGG] gi|148718183|gb|ABQ99310.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittGG] Length = 296 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 78/242 (32%), Positives = 129/242 (53%), Gaps = 17/242 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + GGKR+RP L AT ML +A AIE IH +L+HDD+ +DD Sbjct: 35 NAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-- 147 LRRG + + T++L GD L S AF ++ +T + A + L+LV LA+G Q Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALVQI-LAQGSGVQGM 153 Query: 148 --------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKKLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND 259 ++ Sbjct: 272 SE 273 >gi|114566119|ref|YP_753273.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337054|gb|ABI67902.1| farnesyl-diphosphate synthase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 301 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/234 (34%), Positives = 122/234 (52%), Gaps = 16/234 (6%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 SD +I + Y IF+GGKRLRP++ L A + + + +ACA+E IH+ +L+HDD+ Sbjct: 32 SDPPLIHQAMHYAIFNGGKRLRPIMVLEGAKIAGGEAEQAIPVACALEMIHSYSLVHDDL 91 Query: 85 VDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACT 139 RRG+ V+G +VL GD LL+ AF ++ E S ++ L ++A Sbjct: 92 PCMDDDDFRRGQPTCHRVFGEANAVLTGDALLTAAFELLSEKNSVSGIKPDTTLRVIAEI 151 Query: 140 LAEGELRQLSLSKNLDVTEE----DY-----LHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 R + + LD+ E DY LH +K T LF AAL +++ G+ Sbjct: 152 ARASGSRGMIGGQILDLEAEGKIIDYESLRKLHCLK--TGQLFRAALRTGAIVGGIGEKG 209 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 AL Y N G+AFQ+ DD+LD +G+ GK++G D R K T P +L ++ Sbjct: 210 LLALSDYADNFGLAFQISDDILDVQGDAALTGKSMGSDARKEKNTYPSLLGLEK 263 >gi|303239901|ref|ZP_07326424.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2] gi|302592611|gb|EFL62336.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2] Length = 297 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 128/228 (56%), Gaps = 19/228 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVL-LACAIEFIHTATLLHDDV--VDDS 88 ++Y + +GGKRLRP+L LA +L GD N V+ ACAIE +HT +L+HDD+ +D+ Sbjct: 35 AMRYSLLAGGKRLRPVLALAVCELL--GGDINEVMPFACAIEMVHTYSLIHDDLPAMDND 92 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACT-- 139 RRGK+ +G ++L GD LL+ AF ++IE+ + + ++A+S +A + Sbjct: 93 DFRRGKLTNHKKFGEAIAILAGDGLLNLAFELMIESTATDNCNNAVQKVKAMSYIAKSSG 152 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + G++ S+N +V E ++ K KT L A + S++I ++L++ Sbjct: 153 IHGMIAGQVIDTE-SENKEVAYETLEYMHKCKTGALIKAPVVSSAIICNASEEDLRSLEA 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y NLG+AFQ+ DD+LD G ++GK +G D N K T + ++ Sbjct: 212 YAGNLGLAFQIKDDILDVEGSTEKLGKKVGSDESNKKTTYVSLYGLEK 259 >gi|29376566|ref|NP_815720.1| heptaprenyl diphosphate synthase, component II, putative [Enterococcus faecalis V583] gi|227520176|ref|ZP_03950225.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX0104] gi|227555390|ref|ZP_03985437.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis HH22] gi|229545358|ref|ZP_04434083.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX1322] gi|255975461|ref|ZP_05426047.1| polyprenyl synthetase [Enterococcus faecalis T2] gi|256619530|ref|ZP_05476376.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200] gi|256762928|ref|ZP_05503508.1| polyprenyl synthetase [Enterococcus faecalis T3] gi|256962662|ref|ZP_05566833.1| polyprenyl synthetase [Enterococcus faecalis HIP11704] gi|257082182|ref|ZP_05576543.1| polyprenyl synthetase [Enterococcus faecalis E1Sol] gi|257084800|ref|ZP_05579161.1| polyprenyl synthetase [Enterococcus faecalis Fly1] gi|257090333|ref|ZP_05584694.1| polyprenyl synthetase [Enterococcus faecalis CH188] gi|257419680|ref|ZP_05596674.1| polyprenyl synthetase [Enterococcus faecalis T11] gi|257422162|ref|ZP_05599152.1| polyprenyl synthetase [Enterococcus faecalis X98] gi|307272749|ref|ZP_07553996.1| polyprenyl synthetase [Enterococcus faecalis TX0855] gi|307275992|ref|ZP_07557125.1| polyprenyl synthetase [Enterococcus faecalis TX2134] gi|307277723|ref|ZP_07558809.1| polyprenyl synthetase [Enterococcus faecalis TX0860] gi|307287854|ref|ZP_07567887.1| polyprenyl synthetase [Enterococcus faecalis TX0109] gi|307295826|ref|ZP_07575658.1| polyprenyl synthetase [Enterococcus faecalis TX0411] gi|312900854|ref|ZP_07760148.1| polyprenyl synthetase [Enterococcus faecalis TX0470] gi|312902835|ref|ZP_07762039.1| polyprenyl synthetase [Enterococcus faecalis TX0635] gi|29344030|gb|AAO81790.1| heptaprenyl diphosphate synthase, component II, putative [Enterococcus faecalis V583] gi|227072348|gb|EEI10311.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX0104] gi|227175504|gb|EEI56476.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis HH22] gi|229309565|gb|EEN75552.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX1322] gi|255968333|gb|EET98955.1| polyprenyl synthetase [Enterococcus faecalis T2] gi|256599057|gb|EEU18233.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200] gi|256684179|gb|EEU23874.1| polyprenyl synthetase [Enterococcus faecalis T3] gi|256953158|gb|EEU69790.1| polyprenyl synthetase [Enterococcus faecalis HIP11704] gi|256990212|gb|EEU77514.1| polyprenyl synthetase [Enterococcus faecalis E1Sol] gi|256992830|gb|EEU80132.1| polyprenyl synthetase [Enterococcus faecalis Fly1] gi|256999145|gb|EEU85665.1| polyprenyl synthetase [Enterococcus faecalis CH188] gi|257161508|gb|EEU91468.1| polyprenyl synthetase [Enterococcus faecalis T11] gi|257163986|gb|EEU93946.1| polyprenyl synthetase [Enterococcus faecalis X98] gi|306496157|gb|EFM65736.1| polyprenyl synthetase [Enterococcus faecalis TX0411] gi|306500999|gb|EFM70306.1| polyprenyl synthetase [Enterococcus faecalis TX0109] gi|306505602|gb|EFM74786.1| polyprenyl synthetase [Enterococcus faecalis TX0860] gi|306507322|gb|EFM76459.1| polyprenyl synthetase [Enterococcus faecalis TX2134] gi|306510363|gb|EFM79386.1| polyprenyl synthetase [Enterococcus faecalis TX0855] gi|310633889|gb|EFQ17172.1| polyprenyl synthetase [Enterococcus faecalis TX0635] gi|311291953|gb|EFQ70509.1| polyprenyl synthetase [Enterococcus faecalis TX0470] gi|315031036|gb|EFT42968.1| polyprenyl synthetase [Enterococcus faecalis TX0017] gi|315149250|gb|EFT93266.1| polyprenyl synthetase [Enterococcus faecalis TX0012] gi|315157199|gb|EFU01216.1| polyprenyl synthetase [Enterococcus faecalis TX0043] gi|315164740|gb|EFU08757.1| polyprenyl synthetase [Enterococcus faecalis TX1302] gi|315167570|gb|EFU11587.1| polyprenyl synthetase [Enterococcus faecalis TX1341] gi|315171630|gb|EFU15647.1| polyprenyl synthetase [Enterococcus faecalis TX1342] gi|315173215|gb|EFU17232.1| polyprenyl synthetase [Enterococcus faecalis TX1346] gi|315575049|gb|EFU87240.1| polyprenyl synthetase [Enterococcus faecalis TX0309B] gi|315576766|gb|EFU88957.1| polyprenyl synthetase [Enterococcus faecalis TX0630] gi|315582475|gb|EFU94666.1| polyprenyl synthetase [Enterococcus faecalis TX0309A] Length = 326 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 9/295 (3%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFI 74 LI + + + E I + + L SGGK LRP L L E + + LL A ++E + Sbjct: 21 LIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEAL 133 H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ + E ++ Sbjct: 81 HMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNGSEFMKIN 140 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L GEL Q+S + ++ YL + KTA LFS + + V++ Sbjct: 141 AQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRL 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q + + Sbjct: 201 AKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQAA----PDVF 256 Query: 254 KSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ G+ I++E + ++ + + + + A KA ++ LPD + K Sbjct: 257 SPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAK 311 >gi|294654995|ref|XP_457083.2| DEHA2B02640p [Debaryomyces hansenii CBS767] gi|199429612|emb|CAG85071.2| DEHA2B02640p [Debaryomyces hansenii] Length = 483 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 88/298 (29%), Positives = 138/298 (46%), Gaps = 49/298 (16%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + + N+ +VL GDFLL +A + ++ Sbjct: 189 LAEIVEMIHTASLLHDDVIDLSDTRRGRPSGNIAFSNKMAVLAGDFLLGRASVAIARLRN 248 Query: 127 QEALEALSLVACTLAEGELRQL-----------SLSKNLDVTE----------------- 158 E +E LS L EGE QL S++ + D+ Sbjct: 249 PEVIELLSTTIANLVEGEFMQLKNTVMSNEGPDSITNDGDIKNIPKATGKVPTVEHEYSV 308 Query: 159 ----------------EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 E YLH KTA L S + + +++G Q+++ + +G NLG Sbjct: 309 TAPGEVDHNTNVSAAFEYYLHKTYLKTASLMSKSSRAAGVLSGSQDNIIENCYDFGRNLG 368 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 + FQ+VDD+LDY GK D + G T P++ A++ + + + +G + Sbjct: 369 LCFQIVDDMLDYTSSDTSFGKPSQADLKLGLATAPILFAWKERPELGELIARKFGEEGDV 428 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 V +KA + E L T A Y KA ++LR LP+S + +L + + L R Sbjct: 429 EVA--RKA---VEECGGLEKTREMAQDYCYKALENLRVLPESDARSALEFLTNSVLTR 481 >gi|260061041|ref|YP_003194121.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501] gi|88785173|gb|EAR16342.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501] Length = 325 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 118/217 (54%), Gaps = 5/217 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + + Y++ GGKR+RP+L L +A + +N + A A+E H +L+HDD++D + LR Sbjct: 30 EPIGYIMDLGGKRMRPVLVLLSAELFGAPAENALPAAAAVEIFHNFSLVHDDIMDAAPLR 89 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----SLVACTLAEGELRQ 147 RG+ W T++L GD +L +A+ ++ E + L S A + EG+ Sbjct: 90 RGRPTVHRKWDPNTAILSGDAMLIRAY-QQLDGYPPELFQPLTRLFSRTALEVCEGQQYD 148 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + DV +YL +I+ KTAVL AL++ ++I G + + ++A+ +G+ LG+AFQL Sbjct: 149 MDFESRDDVGIPEYLRMIEFKTAVLLGCALQMGAIIGGAEVAEQEAVYDFGIRLGLAFQL 208 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 DD LD G GK +G D K T + A +R Sbjct: 209 QDDYLDVFGNPETFGKQVGGDIIENKKTYLYLQALER 245 >gi|67623923|ref|XP_668244.1| hypothetical protein [Cryptosporidium hominis TU502] gi|54659431|gb|EAL38008.1| hypothetical protein Chro.70416 [Cryptosporidium hominis] Length = 456 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/260 (32%), Positives = 145/260 (55%), Gaps = 39/260 (15%) Query: 27 VEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYR---------GDNHVLLACAIEF 73 +E IP D+VKY+ S GK R A +L++ G +H +L +I+ Sbjct: 131 LEFIPNEMKDIVKYVFQSEGKLTRQNYLSALVGLLKFAMGVNHSQPIGSDHRMLIHSIQL 190 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IH+A+LLHDD++D+S +RRGK A ++GN+ ++L+GD+L S++ + ++ A++ + Sbjct: 191 IHSASLLHDDILDNSEIRRGKKAPYKIFGNKRTILLGDYLFSKSCLNISLIENINAMKCI 250 Query: 134 SLVACTLAEGELRQL----SLSKNLDVTE------EDYL--HVIKS--KTAVLFS-AALE 178 S++A L +GE QL SL ++L+ ++ E+Y +++KS KTA LFS + Sbjct: 251 SIIAENLVKGEFSQLNGLGSLIESLNNSKDRKGLVENYFEKYLLKSYYKTASLFSFGGIA 310 Query: 179 VSSLI-AGVQNSVRQALKSY----GMNLGIAFQLVDDVLDYRGEVNEM--GKNIGEDFRN 231 S L+ N +R + Y G+N G+AFQL+DD+LD+ ++++ GK D + Sbjct: 311 CSELLKKAYGNKLRMEMIIYSYYMGLNFGLAFQLMDDILDFTNSISQVNSGKPFLNDIKQ 370 Query: 232 GKPTLPVILAF----QRGTK 247 G T+P+ +R TK Sbjct: 371 GILTIPIYFLLLGDQERATK 390 >gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus] Length = 319 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 28/240 (11%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y + +GGKR+RP+L L+T L + +ACAIE IHT +L+HDD+ +D+ L Sbjct: 37 AMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDL 96 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---------------EALEALSL 135 RRGK V+G ++L GD LL+ AF +++E + +A + Sbjct: 97 RRGKPTNHKVFGEAMAILAGDGLLTYAFQLIVEIDDERIPPSVRLRLIERLAKAAGPEGM 156 Query: 136 VACTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 VA A EGE + L+LS E +Y+H + KT + ++ +LI G + Sbjct: 157 VAGQAADMEGEGKTLTLS------ELEYIH--RHKTGKMLQYSVHAGALIGGADARQTRE 208 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L + +LG+AFQ+ DD+LD G ++GK +G D N K T P +L+ G K + F Sbjct: 209 LDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPALLSLA-GAKEKLAFH 267 >gi|120402007|ref|YP_951836.1| trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1] gi|119954825|gb|ABM11830.1| Trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1] Length = 329 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/296 (29%), Positives = 154/296 (52%), Gaps = 9/296 (3%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDD 87 ++ + V++L +GGKR RP+ T+ +A + V +A A IE +H ATL HDDV+D+ Sbjct: 37 LMAEAVQHLFQAGGKRFRPLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDVMDE 96 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA---EGE 144 + +RRG +A W N ++L GD+L + A +V S+ +A+ ++A T A G+ Sbjct: 97 AQVRRGAPSANARWSNNIAILAGDYLFATASRLV----SRLGPDAVRIIADTFALLVTGQ 152 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 +R+ + + + YL V+ KTA L +A+ + +G + + L G +G A Sbjct: 153 MRETRGAADHVDEVDHYLKVVYEKTACLIAASGRFGATFSGADDEQIERLARLGGIVGTA 212 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DD++D + +E GK G D R G TLPV+ A R T + + + + Sbjct: 213 FQISDDIIDIDSDPDESGKVPGTDLREGVHTLPVLYAL-RETGPDADRLRELLATPVTDD 271 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +L +A ++R + + + +Y ++A+ L LP +++L +V + + R Sbjct: 272 GDLAEALRLLRASDGITKAKETVAAYAREAEQELGQLPAGPGRQALATLVQYTINR 327 >gi|225458370|ref|XP_002283364.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 371 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 84/269 (31%), Positives = 139/269 (51%), Gaps = 25/269 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP L LA ++ N + ACA+E IHT +L+HDD+ +D+ Sbjct: 107 IHEAMRYSLLAGGKRVRPALCLAACELVGGDESNAMPAACAVEMIHTMSLIHDDLPCMDN 166 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE---------ALSLVAC 138 LRRGK V+G +VL GD LL+ AF + S + A S+ A Sbjct: 167 DDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEHLATATSGVSSSRIVAAVGELAKSIGAE 226 Query: 139 TLAEGELRQLSLSKNLDVT--EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ +S + DV + +++H+ KTA L AA+ + +L+ G + + L+ Sbjct: 227 GLVAGQVVDISSTGQSDVGLDQLEFIHI--HKTAALLEAAVVLGALLGGGSDEEVEKLRK 284 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y +G+ FQ+VDD+LD E+GK G+D K T P ++ ++ + +N K Sbjct: 285 YARQVGLLFQVVDDILDVTKSSQELGKTAGKDLVTDKATYPKLMGLEKSREFAENLNKEA 344 Query: 257 INDGKISVENLKKA--------FIIMREN 277 ++S +L+KA +I R+N Sbjct: 345 KE--QLSGFDLEKAAPLIALADYIAYRQN 371 >gi|295113304|emb|CBL31941.1| Geranylgeranyl pyrophosphate synthase [Enterococcus sp. 7L76] gi|315161451|gb|EFU05468.1| polyprenyl synthetase [Enterococcus faecalis TX0645] Length = 326 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 9/295 (3%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFI 74 LI + + + E I + + L SGGK LRP L L E + + LL A ++E + Sbjct: 21 LIEQTLHTRNEDIEEALVSLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEAL 133 H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ + E ++ Sbjct: 81 HMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNGSEFMKIN 140 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L GEL Q+S + ++ YL + KTA LFS + + V++ Sbjct: 141 AQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRL 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q + + Sbjct: 201 AKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQAA----PDVF 256 Query: 254 KSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ G+ I++E + ++ + + + + A KA ++ LPD + K Sbjct: 257 SPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAK 311 >gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum] Length = 365 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 84/280 (30%), Positives = 143/280 (51%), Gaps = 29/280 (10%) Query: 5 EDLTLKDMEKVNFLILKRICSDV---EMIP--------DVVKYLIFSGGKRLRPMLTLAT 53 E L + E +++ K I + E IP + ++Y + +GGKR+RP+L +A+ Sbjct: 66 EKFILPEFEFQEYMVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRPILCMAS 125 Query: 54 ALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLV 109 ++ GD + + ACA+E IHT +L+HDD+ +D+ LRRGK ++G T+VL Sbjct: 126 CEVV--GGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKIFGENTAVLA 183 Query: 110 GDFLLSQAFCMVI----ETKSQEALEALSLVACT-----LAEGELRQL-SLSKNLDVTEE 159 GD LLS AF V Q ++A+ + L G++ L S K + +TE Sbjct: 184 GDALLSLAFEHVATKTQNVPPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTEL 243 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 +Y+H KT+ L AA+ +++ G + ++SY +G+ FQ+VDD+LD + Sbjct: 244 EYIH--HHKTSKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSD 301 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 E+GK G+D K T P ++ ++ + +N+ Sbjct: 302 ELGKTAGKDLITDKATYPKLMGLEKARQYAGELMAKAMNE 341 >gi|306820732|ref|ZP_07454359.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551231|gb|EFM39195.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 295 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/238 (30%), Positives = 132/238 (55%), Gaps = 16/238 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 + I + + Y + GGKRLRP+L + T + + + ++ +AC +E IHT +L+HDD+ + Sbjct: 30 QKIIESMSYSLLGGGKRLRPVLFIETLKLFDIDFEQYLNIACVLEMIHTYSLIHDDLPAM 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE--- 142 D+ LRRGK +V+G ++L GD LL+ ++ ++ + + + +++AC L Sbjct: 90 DNDDLRRGKPTNHIVYGEDVAILAGDSLLNLSYEVLFDFLYKNS-SPNNILACRLISKNA 148 Query: 143 -------GELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G++ ++ +K +D+ Y+H +KTA L A++ ++ I+ L Sbjct: 149 GIFGMIGGQVSDVINENKEIDIENLKYIHY--NKTAKLIMASILSAAYISDCSKEYITYL 206 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +SY N+G+AFQ+ DD+LD G+ +GK+IG+D + GK T P + + KN+ Sbjct: 207 ESYAYNIGMAFQISDDILDVVGDKEIVGKSIGKDEQYGKNTYPKYFGLEESKIKLKNY 264 >gi|167461667|ref|ZP_02326756.1| heptaprenyl diphosphate synthasecomponent II (spore germination protein C3) [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382208|ref|ZP_08056122.1| heptaprenyl diphosphate synthase component II-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153825|gb|EFX46192.1| heptaprenyl diphosphate synthase component II-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 326 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/253 (33%), Positives = 132/253 (52%), Gaps = 17/253 (6%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVV-----KYLIFSGGKRLRPMLTLATALML 57 ML + D ++++ IL + D ++ D V L+ SGGKRLRPM+ + + Sbjct: 2 MLNEALHIDPKRIDREILSLVKHDPDIPSDSVIGKSIAELVESGGKRLRPMMVIVGSRFG 61 Query: 58 EYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 L LA EFIH A+L+HDD++D S RR + A G QT+V ++++++ Sbjct: 62 PRPSPRKTLQLAAIAEFIHAASLIHDDIIDRSDTRRNRPALHTKVGIQTAVHTANYMMAR 121 Query: 117 AFCMVIETKSQEALEA------LSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169 V+E SQ + E S + T L GE +QL+ + DVTEE YL +KT Sbjct: 122 ----VVELLSQYSKEHDRYVQDFSAITTTQLCIGEYQQLNHRFDFDVTEEVYLEKTGNKT 177 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 A L + L+V + + ++V L +G L ++FQ+ DD+LD+ ++GK G D Sbjct: 178 AQLMATCLKVGAKSSDASDAVADKLYQFGECLVMSFQIRDDLLDFTQPSEQLGKPAGSDL 237 Query: 230 RNGKPTLPVILAF 242 NG+ TLPV+ A Sbjct: 238 INGQVTLPVLYAL 250 >gi|313675607|ref|YP_004053603.1| polyprenyl synthetase [Marivirga tractuosa DSM 4126] gi|312942305|gb|ADR21495.1| Polyprenyl synthetase [Marivirga tractuosa DSM 4126] Length = 326 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/287 (31%), Positives = 149/287 (51%), Gaps = 13/287 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP+L+L + + + + + A+E H TL+HDD++D++ LRRG Sbjct: 32 IRYIMSLGGKRMRPLLSLLSYQLYKDNIKEVIPASIAVEIFHNFTLMHDDIMDNAPLRRG 91 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACTLAEGELRQLS 149 + W + ++L GD +L +A+ +I K E LE + A + EG+ ++ Sbjct: 92 QQTVHEKWNSPVAILSGDVMLVKAYQQLIANSPTEKLTEILEKFNRCAIEVCEGQQIDMN 151 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL-KSYGMNLGIAFQLV 208 + V E DY+ +I+ KTAVL +LE ++A + N QAL G+N GI FQL+ Sbjct: 152 FEEQEQVQEADYIEMIRLKTAVLLGFSLEFGGILA-MDNEADQALLYQMGVNAGIGFQLM 210 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI----LAFQRGTKREKNFWKSTINDGKISV 264 DD+LD + ++ GK +G D K T +I LA + + ++ K+ D + V Sbjct: 211 DDLLDVYADQDKFGKQVGGDIIANKKTYLLIKANELAQGENSIKLHDWLKAQDFDNEEKV 270 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 +K I E TE + Y +KA +L L S KK+++ Sbjct: 271 NAVKS---IYDELHIKTLTEAKMNEYFEKAFTNLEDLDAPSEKKNII 314 >gi|301156308|emb|CBW15779.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1] Length = 297 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/239 (31%), Positives = 125/239 (52%), Gaps = 11/239 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +D+ Sbjct: 36 DAMKYGLLLGGKRVRPFLVYATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLPAMDNDE 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG+ + + T++L GD L + AF ++ E S A + L LV ++ + Sbjct: 96 LRRGQPTCHIAFDEATAILAGDALQAFAFEILTEAPSLSAEQKLQLVKVLAQASGVQGMC 155 Query: 150 LSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAG--VQNSVRQALKSYGMN 200 L ++LD+ E D L +I ++KT L +AAL++ + + + Q L+ Y Sbjct: 156 LGQSLDLISEHKQVNLDELELIHRNKTGALLTAALKLGFICSPHFENKELEQQLERYSQA 215 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 +G+AFQ+ DD+LD G E+GK +G D K T P +L + ++ + + + +++ Sbjct: 216 IGLAFQVQDDILDIEGNSAEIGKPVGSDLDLDKSTYPKLLGLEGAKQKAQELYHTALHE 274 >gi|313886949|ref|ZP_07820652.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I] gi|312923646|gb|EFR34452.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I] Length = 334 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 99/276 (35%), Positives = 146/276 (52%), Gaps = 24/276 (8%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLAC---AIEFIHTATLLHDDVVDDSALRRGKVAA 97 G KR+RP+L L LM Y L A A+E H TLLHDDV+D+S +RRGK + Sbjct: 46 GAKRVRPVLAL---LMQAYLRPEAPLAASPIVALEVFHNFTLLHDDVMDNSPVRRGKPSV 102 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----SLVACTLAEGELRQLSLS-K 152 +G ++L GD +L A+ M+ E S E L L + +A + EG+ QL L + Sbjct: 103 YAKYGLTPAILSGDAMLILAYQMLTEGVSPEMLPDLIQNFNKMATLIMEGQ--QLDLEYE 160 Query: 153 NLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 LD V++E YL +I KTAVL + A ++++ + ++ ++G NLG+AFQL DD Sbjct: 161 QLDYVSKEQYLEMIGYKTAVLIATATRFGAILSKGSATELESSYAFGWNLGLAFQLQDDY 220 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN------DGKIS-V 264 LD G+ GK +G D GK T+ LA+ ++ ++ T+ + KIS V Sbjct: 221 LDLYGDSETFGKPLGGDILEGKKTILHTLAYATASQAQRQALTETMRRSNEQAEEKISAV 280 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + L I + +ALV EY A + QKA D+L Sbjct: 281 KTLYDEMDIATQVQALV-REYLAEA--QKALDALES 313 >gi|303282127|ref|XP_003060355.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457826|gb|EEH55124.1| predicted protein [Micromonas pusilla CCMP1545] Length = 311 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 90/289 (31%), Positives = 146/289 (50%), Gaps = 13/289 (4%) Query: 21 KRICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALMLEYRGD---NHVLLACAIEF 73 + + S+V + +Y G GKR+RP +L +A+AL E GD LA E Sbjct: 3 RAVTSEVPALATAAEYFFKVGAEGKRMRPTVLLLMASALTNEP-GDVRRRQQRLAEITEL 61 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IH A+LLHDDV+D +A RRG A L GN+ ++L GDFLL++A + ++ E + L Sbjct: 62 IHVASLLHDDVLDHAATRRGLRALNLEVGNKLAILAGDFLLARASVTLASLRNTEVIALL 121 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 S V L GE+ Q++ + + + Y KTA L + + + L+ G + ++ Sbjct: 122 SRVLEHLVTGEVMQMTAKADRLTSFDHYFQKTYFKTASLIANSAKAIVLLGGHDVTTAES 181 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 YG +LG+AFQ DDVLD+ G + +GK D R G T PV+ A + E Sbjct: 182 AYQYGRHLGLAFQFQDDVLDFTGTGSVLGKPTLGDLREGIATAPVLFAAE-----EHEGL 236 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + I +V +++ A ++ ++ + T+ A + +A ++ LP Sbjct: 237 GALIERRFKNVGDVETAHDWVKRSKGIERTKALAREHSAEAVRAIESLP 285 >gi|327400034|ref|YP_004340873.1| Farnesyltranstransferase [Archaeoglobus veneficus SNP6] gi|327315542|gb|AEA46158.1| Farnesyltranstransferase [Archaeoglobus veneficus SNP6] Length = 303 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/229 (33%), Positives = 128/229 (55%), Gaps = 10/229 (4%) Query: 20 LKRICSDVEMIPDV---VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 L + ++V+ IP V ++++I +GGKR RP++ L + + + +A A+E IHT Sbjct: 15 LDNLVNEVDAIPKVKKALRHIIKAGGKRTRPIIVLLSGRLCGGEWSEVMNVALAVELIHT 74 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+L HDDV+D +RR + + ++LVGD+L+S++ +V ++E + + V Sbjct: 75 ASLAHDDVIDRGVVRRNVETLHVKYDTSLAILVGDWLISKSVELV-SVYNEEVIRDFARV 133 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 +AEGE+ + KN EEDY I +KTA LF+ + + + I + L + Sbjct: 134 GMMMAEGEIMDIDSIKNGGFGEEDYFKCIAAKTASLFAYSAKNACRIVSDDKKAAEYLFN 193 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 YG NLGIA+QLVDD+L+Y E+ ++ +F + TLP+I + G Sbjct: 194 YGNNLGIAYQLVDDLLEYL----EIFEDKKSEFES--RTLPMIYEERYG 236 >gi|315143484|gb|EFT87500.1| polyprenyl synthetase [Enterococcus faecalis TX2141] Length = 326 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 9/295 (3%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFI 74 LI + + + E I + + L SGGK LRP L L E + + LL A ++E + Sbjct: 21 LIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEAL 133 H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ + E ++ Sbjct: 81 HMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNGSEFMKIN 140 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L GEL Q+S + ++ YL + KTA LFS + + V++ Sbjct: 141 AQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRL 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q + + Sbjct: 201 AKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQAA----PDVF 256 Query: 254 KSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ G+ I++E + ++ + + + + A KA ++ LPD + K Sbjct: 257 SPYLDRGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAK 311 >gi|256961512|ref|ZP_05565683.1| polyprenyl synthetase [Enterococcus faecalis Merz96] gi|293385200|ref|ZP_06631019.1| polyprenyl synthetase family protein [Enterococcus faecalis R712] gi|293388168|ref|ZP_06632690.1| polyprenyl synthetase family protein [Enterococcus faecalis S613] gi|312908285|ref|ZP_07767249.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512] gi|312910643|ref|ZP_07769484.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516] gi|256952008|gb|EEU68640.1| polyprenyl synthetase [Enterococcus faecalis Merz96] gi|291077533|gb|EFE14897.1| polyprenyl synthetase family protein [Enterococcus faecalis R712] gi|291082408|gb|EFE19371.1| polyprenyl synthetase family protein [Enterococcus faecalis S613] gi|310625699|gb|EFQ08982.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512] gi|311289019|gb|EFQ67575.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516] Length = 326 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 9/295 (3%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFI 74 LI + + + E I + + L SGGK LRP L L E + + LL A ++E + Sbjct: 21 LIEQTLQTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEAL 133 H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ + E ++ Sbjct: 81 HMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNGSEFMKIN 140 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L GEL Q+S + ++ YL + KTA LFS + + V++ Sbjct: 141 AQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRL 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q + + Sbjct: 201 AKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQAA----PHVF 256 Query: 254 KSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ G+ I++E + ++ + + + + A KA ++ LPD + K Sbjct: 257 SPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAK 311 >gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414] gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414] Length = 309 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 12/244 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L LA M+ + ACA+E IHT +L+HDD+ + Sbjct: 43 EKIYESMRYSLLAGGKRLRPILCLAACEMIGGTISMAMPTACAMEMIHTMSLIHDDLPAM 102 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETKSQE------ALEALSL 135 D+ RRG++ V+G+ ++L GD LL+ AF V E S+E A +L Sbjct: 103 DNDDYRRGRLTNHKVYGDDIAILAGDGLLAYAFEFVATQTPENVSRERVLQVIARLGKAL 162 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L D++ E + KTA L A++ ++AG + Q L Sbjct: 163 GAAGLVGGQVVDLDSEGKTDISLETLNFIHNHKTAALLEASVVCGGIVAGASSENVQRLS 222 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y N+G+AFQ++DD+LD ++GK G+D K T P + + + + ++ Sbjct: 223 RYSQNIGLAFQIIDDILDITATQEQLGKTAGKDLIAKKVTYPSLWGIEESRSKAQQLVEA 282 Query: 256 TIND 259 + Sbjct: 283 ACKE 286 >gi|297570910|ref|YP_003696684.1| polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296931257|gb|ADH92065.1| Polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 338 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 159/329 (48%), Gaps = 14/329 (4%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 ++E+LT + M +V + + D ++ + +L +GGKRLRP L L TA + Sbjct: 14 NLVEELTSR-MGEVEAQLRLAVQVDDLVVDEATSHLAKAGGKRLRPALCLLTAQLGPRPA 72 Query: 62 DNHVL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 VL A +E H ATL HDDV+D++ LRRG +A+ V+GN +++L GD L ++A + Sbjct: 73 SPDVLDSAVVVELTHLATLYHDDVMDEAPLRRGVPSAQYVYGNSSAILAGDVLFARASGI 132 Query: 121 VIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 V ++ EA+ L A T L G+L + + + + ++ V+ KT L +A+ Sbjct: 133 V----AKLGPEAVLLHAETFERLCMGQLHETIGPREGEDPIQHHIQVLADKTGSLIAASG 188 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 L +G ++ + + +G +G+AFQ+ DDV+D + GK G D G PT+P Sbjct: 189 RYGVLYSGGDPALAEEIAQFGDKVGVAFQIADDVIDLVSDPEVTGKTPGTDLLEGVPTMP 248 Query: 238 VILAFQR---GTKREKNFWKSTINDGKISVE--NLKKAFIIMRENRALVDTEYRAYSYGQ 292 +L + GT E T D E NL ++R + + +T A+ + Sbjct: 249 TLLLRKHAAEGTLDETGQRILTFLDHTDLTEGNNLDTVVELLRNHSVVDETRTLAHQWVN 308 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A L +P + +L + RL Sbjct: 309 DALTHLSAIPQGPVRNALETFARAMVDRL 337 >gi|225158893|ref|ZP_03725207.1| polyprenyl synthetase [Opitutaceae bacterium TAV2] gi|224802511|gb|EEG20769.1| polyprenyl synthetase [Opitutaceae bacterium TAV2] Length = 429 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/255 (29%), Positives = 128/255 (50%), Gaps = 27/255 (10%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL-------------------- 51 M +++ + +++ + I D+ Y I + GKR+RP L Sbjct: 93 MARLDAFLREQLVAFEPEIRDMADYCIDTSGKRIRPALVFLAGWAGDDECGGGGGGGRID 152 Query: 52 --ATALMLE----YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT 105 AL+ + D V A +E +H ATL+HDD++D++ +RR + A +G++ Sbjct: 153 DDIGALLRSSDSAFPDDPLVRAAAVVELVHLATLVHDDIMDEADVRRNRPTAARKYGSEA 212 Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 +VL+GD LL+ A + + + E A+S + GE+ Q D++ DY VI Sbjct: 213 AVLLGDALLAHAVYLASQFPTTEVCAAVSQSTRKVCAGEIVQTLRRGTTDISRADYDRVI 272 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA LF + + + ++G A ++G +LGIA+Q+ DD+ D+ GE N +GK + Sbjct: 273 DLKTAELFRVSCHLGARLSG-HPDFAPAASTFGRHLGIAYQIYDDLADFFGEENRIGKTL 331 Query: 226 GEDFRNGKPTLPVIL 240 G D +GK TLP++ Sbjct: 332 GTDLASGKITLPLLF 346 >gi|308197999|ref|XP_001386769.2| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS) [Scheffersomyces stipitis CBS 6054] gi|149388806|gb|EAZ62746.2| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS) [Pichia stipitis CBS 6054] Length = 465 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 136/298 (45%), Gaps = 50/298 (16%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + + N+ +VL GDFLL +A + ++ Sbjct: 172 LAEIVEMIHTASLLHDDVIDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIARLRN 231 Query: 127 QEALEALSLVACTLAEGELRQL-----------------------------------SLS 151 E +E LS L EGE QL S+S Sbjct: 232 PEVIELLSTTIANLVEGEFMQLKNTVMSNDSQSIVNDGEKKVIPEPTGKVPTKQHEYSVS 291 Query: 152 K--------NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 N+D E YLH KTA L S + +++++G + + + +G NLG+ Sbjct: 292 TPAEVDHITNVDAAFEYYLHKTYLKTASLMSKSSRAAAVLSGAHDDIIENCYEFGRNLGL 351 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 FQ+VDD+LDY GK D + G T P++ A++ + + + G + Sbjct: 352 CFQIVDDMLDYTASDATFGKPSQADLKLGLATAPILFAWKEQPELGELIARKFSEPGDVE 411 Query: 264 V-ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + N K + + + R + A+ Y KA +LR LP+S + +L + + L R Sbjct: 412 IARNAVKKYSGLEKTREM------AHEYCYKALQNLRVLPESDARSALEFLTNSVLTR 463 >gi|257087255|ref|ZP_05581616.1| polyprenyl synthetase [Enterococcus faecalis D6] gi|294780336|ref|ZP_06745705.1| polyprenyl synthetase [Enterococcus faecalis PC1.1] gi|307270277|ref|ZP_07551585.1| polyprenyl synthetase [Enterococcus faecalis TX4248] gi|256995285|gb|EEU82587.1| polyprenyl synthetase [Enterococcus faecalis D6] gi|294452600|gb|EFG21033.1| polyprenyl synthetase [Enterococcus faecalis PC1.1] gi|306513331|gb|EFM81955.1| polyprenyl synthetase [Enterococcus faecalis TX4248] gi|315026059|gb|EFT37991.1| polyprenyl synthetase [Enterococcus faecalis TX2137] gi|327535515|gb|AEA94349.1| putative trans-hexaprenyltranstransferase [Enterococcus faecalis OG1RF] Length = 326 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 9/295 (3%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFI 74 LI + + + E I + + L SGGK LRP L L E + + LL A ++E + Sbjct: 21 LIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEAL 133 H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ + E ++ Sbjct: 81 HMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNGSEFMKIN 140 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L GEL Q+S + ++ YL + KTA LFS + + V++ Sbjct: 141 AQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRL 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q + + Sbjct: 201 AKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQAA----PDVF 256 Query: 254 KSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ G+ I++E + ++ + + + + A KA ++ LPD + K Sbjct: 257 GPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAK 311 >gi|151946397|gb|EDN64619.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae YJM789] gi|190408825|gb|EDV12090.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae RM11-1a] gi|256273178|gb|EEU08127.1| Coq1p [Saccharomyces cerevisiae JAY291] gi|259144849|emb|CAY77788.1| Coq1p [Saccharomyces cerevisiae EC1118] gi|323334502|gb|EGA75876.1| Coq1p [Saccharomyces cerevisiae AWRI796] gi|323338819|gb|EGA80034.1| Coq1p [Saccharomyces cerevisiae Vin13] gi|323349821|gb|EGA84035.1| Coq1p [Saccharomyces cerevisiae Lalvin QA23] Length = 473 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 92/305 (30%), Positives = 135/305 (44%), Gaps = 62/305 (20%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + N+ +VL GDFLL +A + + Sbjct: 178 LAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNTAFTNKMAVLAGDFLLGRATVSISRLHN 237 Query: 127 QEALEALSLVACTLAEGELRQLS--------------------LSKNLDVTEED------ 160 E +E +S L EGE QL SK L+V E D Sbjct: 238 PEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFRVPSR 297 Query: 161 ------------------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 Y+H KTA L S + +++++G +V +G NLG Sbjct: 298 QQGLQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGRNLG 357 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 I FQLVDD+LD+ ++GK G D + G T PV+ A WK + G + Sbjct: 358 ICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFA-----------WKEDPSLGPL 406 Query: 263 SVEN------LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-CLPDSSWKKSLMEVVD 315 N ++K +R + + T+ A Y KA +LR LP+S + +L + + Sbjct: 407 ISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESDARSALEFLTN 466 Query: 316 FCLQR 320 L R Sbjct: 467 SILTR 471 >gi|323356280|gb|EGA88084.1| Coq1p [Saccharomyces cerevisiae VL3] Length = 371 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 101/340 (29%), Positives = 145/340 (42%), Gaps = 68/340 (20%) Query: 38 IFSGGKRLRPMLTLATALMLE----YRG--DNHVLLACAIEFIHTATLLHDDVVDDSALR 91 I G K L P+ L E RG LA +E IHTA+LLHDDV+D S R Sbjct: 41 ILHGIKPLNPLTKGPEPLPEETFDKQRGILPKQRRLAEIVEMIHTASLLHDDVIDHSDTR 100 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS-- 149 RG+ + + N+ +VL GDFLL +A + + E +E +S L EGE QL Sbjct: 101 RGRPSGNTAFTNKMAVLAGDFLLGRATVSISRLHNPEVVELMSNSIANLVEGEFMQLKNT 160 Query: 150 ------------------LSKNLDVTEED------------------------YLHVIKS 167 SK L+V E D Y+H Sbjct: 161 SIDADIDTIENGHKLLPVPSKKLEVKEHDFRVPSRQQGLQLSHDQIIETAFEYYIHKTYL 220 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KTA L S + +++++G +V +G NLGI FQLVDD+LD+ ++GK G Sbjct: 221 KTAALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGA 280 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN------LKKAFIIMRENRALV 281 D + G T PV+ A WK + G + N ++K +R + + Sbjct: 281 DLKLGIATAPVLFA-----------WKEDPSLGPLISRNFSERGDVEKTIDSVRLHNGIA 329 Query: 282 DTEYRAYSYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQR 320 T+ A Y KA +LR LP+S + +L + + L R Sbjct: 330 KTKILAEEYRDKALQNLRDSLPESDARSALEFLTNSILTR 369 >gi|225791079|gb|ACO31283.1| PtmT4 [Streptomyces platensis] Length = 348 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 2/208 (0%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 SGGK +R LT+ A V A A+E +H +LLHDDV+D RRG+ Sbjct: 63 SGGKMIRAALTILAAEACGGDARQAVPGAAAVELVHNFSLLHDDVMDRDLERRGRPTVWS 122 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALSLVACTLAEGELRQLSLSKNLDVT 157 +G ++L GD LL++A M E + A +AL LA G++ L+L + VT Sbjct: 123 KFGTPAAILAGDILLARACGMFDEASGHQGWATKALIDAIAELAAGQMADLALERRATVT 182 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L V + KTA L A + + + G + + ++GM+LG+AFQLVDDVL G+ Sbjct: 183 LEEALTVSEQKTAALLRCACTLGAGLVGAPDGTSRRFGAFGMHLGMAFQLVDDVLGIWGD 242 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK + D N K ++PV+ A G Sbjct: 243 PAVTGKPVRSDLHNKKKSIPVVAALHSG 270 >gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A] gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A] Length = 299 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + +GGKRLRP+L LA + + + A A+E IHT +L+HDD+ + Sbjct: 35 EKLRESMRYSLLAGGKRLRPILCLAACELAGGELEKALPTAVALEMIHTMSLIHDDLPSM 94 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLV-------- 136 D+ LRRG+ V+G+ ++L GD LL++AF MV I T+ + L ++ Sbjct: 95 DNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFEMVSIRTEGIPSERLLKIIGELSLAAG 154 Query: 137 ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L K +D+ +Y+H+ KT L A + +LI G + +AL Sbjct: 155 APGLVGGQVVDLDCEGKEVDLETLEYIHL--HKTGALLKACVTCGALIGGADEKLLEALS 212 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 Y +G+AFQ++DD+LD +GK G+D K T P +L +R Sbjct: 213 IYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLIADKTTYPKLLGLDESRRR 265 >gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C] gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 295 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 80/243 (32%), Positives = 129/243 (53%), Gaps = 16/243 (6%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L++ + +I + ++Y +F+GGKRLRP LTLA A + + ACAIE IHT +L Sbjct: 21 LRQASENPPVIHEAMRYSVFAGGKRLRPALTLAAAQAVGAPERLVLPAACAIELIHTYSL 80 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LS 134 +HDD+ +D+ LRRGK V+G ++L G L + AF ++ + L A L+ Sbjct: 81 IHDDLPAMDNDDLRRGKPTNHRVFGEAVALLAGSALFALAFEVLAGCRRDGGLAAERILA 140 Query: 135 LV-----ACTLAE---GE-LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +V AC A G+ L +S+S+ + E + +H ++KT LF AA+ +++ G Sbjct: 141 VVEEVAAACGTAGLIGGQALDVVSVSRTVSEAELEAVH--RAKTGALFRAAVRAGAVLGG 198 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + L + + G+AFQ+ DD+LD G + GK +G D RN K T + + Sbjct: 199 ASPVQLERLTVFAEHFGLAFQITDDILDVTGYAEQTGKAVGSDARNRKHTYVSVCGLEAA 258 Query: 246 TKR 248 +R Sbjct: 259 RRR 261 >gi|6319475|ref|NP_009557.1| Coq1p [Saccharomyces cerevisiae S288c] gi|116929|sp|P18900|COQ1_YEAST RecName: Full=Hexaprenyl pyrophosphate synthase, mitochondrial; Short=HPS; Flags: Precursor gi|171704|gb|AAA34686.1| hexaprenyl pyrophosphate synthetase (COQ1) [Saccharomyces cerevisiae] gi|536190|emb|CAA84939.1| COQ1 [Saccharomyces cerevisiae] gi|45270088|gb|AAS56425.1| YBR003W [Saccharomyces cerevisiae] gi|285810339|tpg|DAA07124.1| TPA: Coq1p [Saccharomyces cerevisiae S288c] gi|323310186|gb|EGA63378.1| Coq1p [Saccharomyces cerevisiae FostersO] Length = 473 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 92/305 (30%), Positives = 135/305 (44%), Gaps = 62/305 (20%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + N+ +VL GDFLL +A + + Sbjct: 178 LAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRATVSISRLHN 237 Query: 127 QEALEALSLVACTLAEGELRQLS--------------------LSKNLDVTEED------ 160 E +E +S L EGE QL SK L+V E D Sbjct: 238 PEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFRVPSR 297 Query: 161 ------------------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 Y+H KTA L S + +++++G +V +G NLG Sbjct: 298 QQGLQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGRNLG 357 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 I FQLVDD+LD+ ++GK G D + G T PV+ A WK + G + Sbjct: 358 ICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFA-----------WKEDPSLGPL 406 Query: 263 SVEN------LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-CLPDSSWKKSLMEVVD 315 N ++K +R + + T+ A Y KA +LR LP+S + +L + + Sbjct: 407 ISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESDARSALEFLTN 466 Query: 316 FCLQR 320 L R Sbjct: 467 SILTR 471 >gi|237742320|ref|ZP_04572801.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13] gi|229429968|gb|EEO40180.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13] Length = 297 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 82/251 (32%), Positives = 126/251 (50%), Gaps = 27/251 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I ++Y +GGKRLRP L AT +L V A A+E IH+ +L+HDD+ + Sbjct: 30 ETIAKGMEYATLNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPAL 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------LVACT 139 D+ RRGK+ V+G +L+GD LL+ AF ++ SQ+ LE LS +++ T Sbjct: 90 DNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVL----SQKNLEFLSSEQLVNIISKT 145 Query: 140 LAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + + + +D+ E+ Y+H KT L +E++ +IA V+ Sbjct: 146 SEYAGINGMIGGQMIDIESENKKIGLETLKYIH--SHKTGKLIKLPIEIACIIANVEKDK 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+ L+ Y +G+AFQ+ DD+LD G ++GK +G D K T P IL G K K Sbjct: 204 RKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSIL----GMKESK 259 Query: 251 NFWKSTINDGK 261 T+ K Sbjct: 260 KILNDTVEKAK 270 >gi|257388648|ref|YP_003178421.1| polyprenyl synthetase [Halomicrobium mukohataei DSM 12286] gi|257170955|gb|ACV48714.1| Polyprenyl synthetase [Halomicrobium mukohataei DSM 12286] Length = 344 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 106/340 (31%), Positives = 176/340 (51%), Gaps = 45/340 (13%) Query: 13 EKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALML--------EYR--- 60 E+VN I + + D E + + +YL+ +GGKRLRP + L A L +YR Sbjct: 16 EQVNDAIERELPVDEPEELYEASRYLMDAGGKRLRPTMLLLAAESLADVAPQSTDYRSFP 75 Query: 61 ---GDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 GD ++ A IE I + TL+HDD++DD LRRG A + T++L GD L S Sbjct: 76 TVEGDEIDVMRAAVGIETIQSFTLIHDDIMDDDDLRRGVPAVHREYDLSTAILAGDTLFS 135 Query: 116 QAFCMVIET--KSQEALEALSLVA--CT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170 +AF +++T K++ ++ A +A CT + EG+ + +VT ++YL +++ KTA Sbjct: 136 KAFEYMLDTGAKAERSVAATKRLAQTCTEICEGQSFDIDFESRAEVTTDEYLDMVELKTA 195 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 VL++A+ + + + G +++V + L YG+++G AFQ+ DD+LD ++GK G D Sbjct: 196 VLYAASASIPAQLMGAEDAV-EPLYGYGLDVGRAFQIQDDLLDLTTPSEKLGKQRGSDLV 254 Query: 231 NGKPTLPVILAFQRGTKRE--------KNFWKSTINDGKISVENLKKAFII--MRENRAL 280 K T+ + A Q+G E + +S I+D +V L+ A I RE Sbjct: 255 EEKQTIVTLHARQQGVDIEGLVETDSVEAVTESEIDD---AVAELEAAGSIEFARET--- 308 Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A+ KD L LPD+ ++ L + D+ ++R Sbjct: 309 ------AHDLIASGKDRLEVLPDNEPRQLLAGIADYLVER 342 >gi|328958756|ref|YP_004376142.1| heptaprenyl diphosphate synthase component II [Carnobacterium sp. 17-4] gi|328675080|gb|AEB31126.1| heptaprenyl diphosphate synthase component II [Carnobacterium sp. 17-4] Length = 326 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 85/283 (30%), Positives = 143/283 (50%), Gaps = 5/283 (1%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHV-LLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 +GGK +RP TL + E + N A AIE +H ATL+HDDV+DDS RRG+ + Sbjct: 45 TGGKLVRPAYTLLFSTFGEDQDPNRARAFAAAIEVLHMATLIHDDVIDDSPKRRGQQTIQ 104 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 +G +V GD+L + +F ++ + + S + ++ + + GE+ Q+ L N +T Sbjct: 105 SKYGKDIAVYAGDYLFTVSFKLITDYSNSMKQMQINTKGMEKILMGEIDQMHLRYNQKIT 164 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 +YL I KTA LF+ + +L +G + G ++G+AFQ+ DD+LDY Sbjct: 165 IRNYLTQISGKTAQLFALSCYSGALESGQTERFARNCYYIGSHIGMAFQIKDDILDYTQT 224 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 + GK + ED + G + P+I A + K+ F + +++ E +K ++ Sbjct: 225 TDVFGKPVLEDVKQGIYSAPLIYAMR---KQNATFKELLEKKEQLTNEETQKIQQLVINT 281 Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 L + + A Y KA + LPDSS K+ + + L+R Sbjct: 282 GGLDEAKRLAGKYTDKALKLIGQLPDSSEKEIIRNLTLSLLER 324 >gi|321261930|ref|XP_003195684.1| trans-hexaprenyltranstransferase [Cryptococcus gattii WM276] gi|317462158|gb|ADV23897.1| trans-hexaprenyltranstransferase, putative [Cryptococcus gattii WM276] Length = 483 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 12/189 (6%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IH A+LLHDDV+D S+LRRG +A +GN+ S+L GDFLL +A + S Sbjct: 221 LASITEMIHVASLLHDDVIDASSLRRGTPSAPSTFGNKLSILSGDFLLGRASVALARLGS 280 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTE-----EDYLHVIKSKTAVLFSAALEVSS 181 +E +E L+ V L EGE+ QL + + EDY+ KTA L + + + Sbjct: 281 REVVELLATVIANLVEGEVMQLRATSEPEKAPTTKGFEDYMRKTYLKTASLMAKSARAAV 340 Query: 182 LIAGVQNS------VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK-NIGEDFRNGKP 234 ++ G + V+ YG NLGIAFQL+DD LD+ +GK ++G D R G Sbjct: 341 VLGGCGSVNEEGAWVKDVAYGYGRNLGIAFQLIDDALDFLPPDPSLGKPSLGADLRLGLA 400 Query: 235 TLPVILAFQ 243 T P + A++ Sbjct: 401 TAPALFAWE 409 >gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313] gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313] Length = 306 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 124/233 (53%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + +GGKRLRP+L LA + + A A+E IHT +L+HDD+ + Sbjct: 42 EQLREAMRYSLLAGGKRLRPILCLAACELAGGEPAEALPTAVALEMIHTMSLIHDDLPAM 101 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-------ALSLVAC 138 D+ LRRG+ V+G+ ++L GD LL+++F MV E LSLVA Sbjct: 102 DNDDLRRGRPTNHKVYGDAVAILAGDALLTRSFEMVALRSPGVPPERLLKVVGELSLVAG 161 Query: 139 T--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L K +D+ +++H+ KT L SA + +LI G ++ + AL+ Sbjct: 162 APGLVGGQVVDLECEGKEVDLETLEFIHL--HKTGALLSACVICGALIGGAEDDLIDALR 219 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 Y +G+AFQ++DD+LD + +GK G+D K T P +L +R Sbjct: 220 IYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLLADKTTYPKLLGLDESRRR 272 >gi|307265160|ref|ZP_07546719.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919782|gb|EFN49997.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 294 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 126/230 (54%), Gaps = 14/230 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E+I + ++Y +F+GGKRLRP+L L++ +L + +ACAIE IHT +L+HDD+ + Sbjct: 28 EIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAM 87 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA------LEALSLVACT 139 D+ LRRGK V+G ++L GD LL+ + +++ + L+A + +A Sbjct: 88 DNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDYERILKATNEIATA 147 Query: 140 -----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G++ + LS+N ++T E+ + + KT L A++ + IA AL Sbjct: 148 SGCKGIIGGQVVDI-LSQNTELTYEELKFMHEHKTGALIEASVCAGAYIASATEEEIHAL 206 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + Y +G AFQ+ DD+LD GE ++GK +G D GK T I ++ Sbjct: 207 REYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDKEKGKFTFVNIFGLEK 256 >gi|242216194|ref|XP_002473906.1| predicted protein [Postia placenta Mad-698-R] gi|220726932|gb|EED80866.1| predicted protein [Postia placenta Mad-698-R] Length = 258 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 129/261 (49%), Gaps = 18/261 (6%) Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 IH A+LLHDDV+D S LRRG +A L +GN+ ++L GDFLL +A + E +E Sbjct: 1 MIHVASLLHDDVIDKSPLRRGVPSAPLAFGNKLTILAGDFLLGRASTTLSRLGDNEVVEL 60 Query: 133 LSLVACTLAEGELRQ--------LSLSKNLDVTEED---YLHVIKSKTAVLFSAALEVSS 181 ++ V L EGE+ Q L L V E+ YL KTA L + + Sbjct: 61 IASVIANLVEGEILQLKSVHAEELGLGGVQSVGAENFNIYLQKTYLKTASLMAKGARAAV 120 Query: 182 LIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++ G + ++ +YG NLGIAFQLVDD+LDY MGK G D + G T P + Sbjct: 121 VLGGCKEGEVWKEIAYAYGRNLGIAFQLVDDILDYESGEAAMGKPGGADLKLGLATGPAL 180 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A++ + + +G + + A ++R + + T A + KA++ L Sbjct: 181 FAWEEHPEMGPLIKRKFQQEGDVEL-----ARDLVRRSSGVERTRDLARMHADKAREVLA 235 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP+S K +L + + ++R Sbjct: 236 PLPESDAKGALEVLTERVVKR 256 >gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5] gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5] Length = 296 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 141/273 (51%), Gaps = 35/273 (12%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKRLRP+L L TA L + +ACAIE IHT +L+HDD+ +D+ Sbjct: 34 IHEAMLYSVRAGGKRLRPLLCLLTAGALRQDESRVLDIACAIEMIHTYSLIHDDLPALDN 93 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE----- 142 LRRGK V+G ++L GD LL++AF E Q L A LV +AE Sbjct: 94 DDLRRGKPTNHRVYGEAMAILAGDALLNRAF----EVLCQLPL-APDLVIRVIAEIASSS 148 Query: 143 -------GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA- 193 G++ + S K++D+ Y+H ++KT + + L VSS IA Q + Q Sbjct: 149 GTAGMIGGQVVDIQSEGKSIDMPTMRYIH--ENKTGRIIRSCL-VSSAIA-CQATAEQIE 204 Query: 194 -LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR---- 248 YG N+G+AFQ+ DD+LD G+ MGK +G D +N K T P ++ K Sbjct: 205 LFDRYGYNIGLAFQIADDILDIEGDEATMGKPVGSDLQNRKSTWPALVGMNGARKAMQEM 264 Query: 249 --EKNFWKSTINDGK--ISVENLKKAFIIMREN 277 E N + D ++ +L + FII R+N Sbjct: 265 IDEANRALDPLGDSPAVTALRDLAR-FIIERKN 296 >gi|268316794|ref|YP_003290513.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252] gi|262334328|gb|ACY48125.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252] Length = 330 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 83/292 (28%), Positives = 145/292 (49%), Gaps = 4/292 (1%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + V+Y++ GKR+RP+L + A + ++ + A A+E H TL+HDD++D +A R Sbjct: 38 EPVRYVLSGTGKRMRPVLLMLAAELYGRPAESVLPAALAVEVFHAFTLVHDDIMDHAAER 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL---VACTLAEGELRQL 148 RG+ + W T++L GD+L+ ++ ++ + ++ L++ + L EG+ Sbjct: 98 RGRPTVHVQWDEATALLCGDYLMGLSYALLGQVENAPLARVLAMFHRMVERLCEGQALDK 157 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + V+ +YL ++ KT+ L L++ L+ G + QAL+ G NLG AFQ+ Sbjct: 158 AFETRAHVSVAEYLQMVDGKTSALLELCLQLGGLLGGAGEADLQALEQLGRNLGRAFQIQ 217 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LD + GK IG D GK T PV+ A ++ + E+ W + E + Sbjct: 218 DDLLDLTATSPQWGKPIGADLMEGKKTFPVLAALEQASDGER-VWFEERLRRRFRPEEVP 276 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +A + L Y Q+A+ +L LPD ++L +D QR Sbjct: 277 EARQRLERLGGLEAARRAVDRYLQEARAALAQLPDRPPAQALAWFLDQLAQR 328 >gi|332669463|ref|YP_004452471.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484] gi|332338501|gb|AEE45084.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484] Length = 334 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 10/297 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D ++L+ +GGKRLRP+LTL TA + + V A +E H ATL HDDV+D + LR Sbjct: 42 DAARHLVNAGGKRLRPLLTLLTAELGDGSRREVVDAATVVELTHLATLYHDDVMDSAPLR 101 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQL 148 RG +A VWGN ++L GD L ++A V +A+ + A T L G+L + Sbjct: 102 RGAPSAHEVWGNSVAILTGDLLFARASATVAGLGP----DAVRIQAATFERLCLGQLHET 157 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + + YL V+ KTA L + + ++ AG + V + + +G LG+AFQL Sbjct: 158 VGPRPGEDPVAHYLQVLADKTASLVATSARFGAMFAGCRPDVVRTVTGFGEKLGVAFQLA 217 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND---GKISVE 265 DDV+D + GK G D R PT+P +L R ++ + + Sbjct: 218 DDVIDLTSDGTLTGKTPGTDLRERVPTMPALLLRARAATDADPADRALVAQLDADLTDDD 277 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 L A +R + + +T RA + ++A D L LP +++L+ D + R + Sbjct: 278 ALAAAVAALRSHPVVAETRERAVALAREAVDELAPLPAGPVREALVAFADALVDRAS 334 >gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Syntrophus aciditrophicus SB] gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Syntrophus aciditrophicus SB] Length = 308 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/238 (31%), Positives = 122/238 (51%), Gaps = 24/238 (10%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDDS 88 ++Y +F+GGKR+RP+L LA A + + LL ACA+E+IHT +L+HDD+ +D+ Sbjct: 45 AMRYSLFAGGKRIRPILCLAAAEAVGTSVSSDCLLPVACALEYIHTYSLIHDDLPAMDND 104 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----------ALSLVA 137 RRGK + V+G+ ++L GD LL++AF ++ T L A + A Sbjct: 105 DYRRGKPTSHKVFGDALAILAGDALLTEAFELMTRTDFHTGLAPEILLRVIREIAAAAGA 164 Query: 138 CTLAEGE---LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G+ LR NLD + KT + +L ++++G AL Sbjct: 165 FGMVGGQVEDLRAEGKPGNLDTLN----RIHNRKTGAMIVVSLRAGAILSGGSEQAVSAL 220 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 YG +G+ FQ+ DD+L+ G+ +GK+ G D GK T P+++ + R+K F Sbjct: 221 TDYGHKIGLVFQIADDILNVEGDRTVLGKSTGSDASRGKMTFPLLMGLE--PSRQKAF 276 >gi|258651230|ref|YP_003200386.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233] gi|258554455|gb|ACV77397.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233] Length = 326 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 89/314 (28%), Positives = 147/314 (46%), Gaps = 14/314 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + +V L+ + + S+ + + +L+ +GGKR RP+ TL A + R D ++ + Sbjct: 20 LGRVEDLLERELISEFSFVTEAASHLMHAGGKRFRPLFTLVAA-GVGPRPDAEEVVVASA 78 Query: 72 E--FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 IH ATL HDDV+D++ +RRG +A W N ++L GDFL + A +V Sbjct: 79 VVELIHLATLYHDDVMDEAQIRRGAKSANARWDNSIAILTGDFLFAHASRLVASLGE--- 135 Query: 130 LEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +A+ ++A T AE G+ R+ + + +L V+ KTA L + + +G Sbjct: 136 -DAVRIIAETFAELVTGQTRETVGPGPDEDPIDHHLRVLDEKTASLIDTCARYAGIFSGA 194 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 AL+ YG +G+AFQ+ DD+LD + GK G D R G TLP + + G Sbjct: 195 PEEHVLALRRYGRAVGVAFQISDDILDICS--TDSGKTPGTDLREGVRTLPAL--YTLGD 250 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + S +L +A ++ + + Y A L LPDSS Sbjct: 251 PAADPRLRELVAGPIRSETDLAEAVTLLTASPGMATARQTLSGYADAAAAELALLPDSSA 310 Query: 307 KKSLMEVVDFCLQR 320 K +L +V + + R Sbjct: 311 KDALASLVRYVMDR 324 >gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61] gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3] gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52] gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61] gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3] gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52] Length = 297 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 17/236 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + Y + +GGKR+RP+L LAT L + +ACAIE IHT +L+HDD+ + Sbjct: 32 ETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDDLPSM 91 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEALSLVA 137 D+ LRRGK V+G ++L GD LL+ AF ++ E + +E L+ A Sbjct: 92 DNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLMAEIDDDRVPPPVRLQLIEQLAKAA 151 Query: 138 CT--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G+ + K L + E +Y+H + KT + ++ +L+ G + L Sbjct: 152 GPEGMVAGQAADMEAEGKTLALAELEYIH--RHKTGKMLQYSVHAGALLGGADGRQTREL 209 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +LG+AFQ+ DD+LD G ++GK +G D N K T PV+L+ G +EK Sbjct: 210 NEFAAHLGLAFQIRDDILDIEGMEEKIGKRVGSDRDNKKATYPVLLSL--GGAKEK 263 >gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans NG80-2] gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16] gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans NG80-2] gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16] Length = 297 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 79/245 (32%), Positives = 124/245 (50%), Gaps = 28/245 (11%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + Y + +GGKR+RP+L L+T L + +ACAIE IHT +L+HDD+ + Sbjct: 32 ETLKKAMAYSLEAGGKRIRPLLLLSTIQALGQNPSLGLPVACAIEMIHTYSLIHDDLPSM 91 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---------------EAL 130 D+ LRRGK V+G ++L GD LL+ AF ++ E + +A Sbjct: 92 DNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLIAEIHDERVPVDVRLQLIAELAKAA 151 Query: 131 EALSLVACTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +VA +A EGE K L + E +Y+H + KT + ++ +L+ G Sbjct: 152 GPEGMVAGQVADMEGE------GKTLALAELEYIH--RHKTGKMLQYSVHAGALLGGADA 203 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + L + +LG+AFQ+ DD+LD G ++GK +G D N K T P +L+ G K Sbjct: 204 RQMRELNEFAAHLGLAFQIRDDILDIEGTEEKIGKRVGSDRENHKATYPALLSLA-GAKE 262 Query: 249 EKNFW 253 + F Sbjct: 263 KLAFH 267 >gi|585326|sp|Q08291|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus] Length = 297 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 28/240 (11%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y + +GGKR+RP+L L+T L + +ACAIE IHT +L+HDD+ +D+ L Sbjct: 37 AMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDL 96 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---------------EALEALSL 135 RRGK V+G ++L GD LL+ AF ++ E + +A + Sbjct: 97 RRGKPTNHKVFGEAMAILAGDGLLTYAFQLITEIDDERIPPSVRLRLIERLAKAAGPEGM 156 Query: 136 VACTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 VA A EGE + L+LS E +Y+H + KT + ++ +LI G + Sbjct: 157 VAGQAADMEGEGKTLTLS------ELEYIH--RHKTGKMLQYSVHAGALIGGADARQTRE 208 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L + +LG+AFQ+ DD+LD G ++GK +G D N K T P +L+ G K + F Sbjct: 209 LDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPALLSLA-GAKEKLAFH 267 >gi|302786728|ref|XP_002975135.1| geranyl diphosphate synthase [Selaginella moellendorffii] gi|300157294|gb|EFJ23920.1| geranyl diphosphate synthase [Selaginella moellendorffii] Length = 342 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 90/320 (28%), Positives = 152/320 (47%), Gaps = 25/320 (7%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRPMLTL------------ATALMLEYRGDNHVLLA 68 + ++V + +Y G GKR RPM+ L A A + + H LA Sbjct: 12 VAAEVPKLASAAEYFFKLGVEGKRFRPMVLLLMSSSLTMVLPSAAAATSDEKNWRHHKLA 71 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 E IH A+LLHDDV+D + RRG + + GN+ +VL GDFLL++A + ++ E Sbjct: 72 EITEMIHVASLLHDDVLDHADTRRGIASLNFIMGNKLAVLAGDFLLARAAFSLSTLQNDE 131 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +S V L GE+ Q ++ + + YL KTA L + + + +++AG Sbjct: 132 VVGLMSKVLEHLVAGEVMQWTVDAEKSSSMDYYLQKTFYKTASLIANSCKCIAILAGHPK 191 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 V YG +LG+A+QLVDD+LD+ G +GK D R G T PV+ A + Sbjct: 192 EVAALAFDYGRHLGLAYQLVDDLLDFTGTKASLGKPALSDLREGIATAPVLYALEEHPAL 251 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 ++ + + G ++ A ++ + + T+ A + KA D++ P ++ +K Sbjct: 252 QELIDRKFKDPG-----DVDSALKMVLASSGIRKTKELAREHASKAADAVAGFPPTTSEK 306 Query: 309 ------SLMEVVDFCLQRLN 322 +L E+ + + R N Sbjct: 307 ASLCRRALTELTEQVITRSN 326 >gi|34763574|ref|ZP_00144509.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl pyrophosphate synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886763|gb|EAA23901.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl pyrophosphate synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 297 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 122/237 (51%), Gaps = 23/237 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I ++Y +GGKRLRP L AT +L V A A+E IH+ +L+HDD+ + Sbjct: 30 ETIAKGMEYATLNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPAL 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------LVACT 139 D+ RRGK+ V+G +L+GD LL+ AF ++ SQ+ LE LS +++ T Sbjct: 90 DNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVL----SQKNLELLSSEQIVNIISKT 145 Query: 140 LAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + + + +D+ E+ Y+H KT L +E++ +IA ++ Sbjct: 146 SEYAGINGMIGGQMIDIESENKKIGLETLKYIH--SHKTGKLIKLPIEIACIIADLEKDK 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 R+ L+ Y +G+AFQ+ DD+LD G E+GK +G D K T P IL + K Sbjct: 204 RKVLEEYADLIGLAFQVKDDILDVEGTFEELGKPVGSDVDLHKATYPSILGMEESKK 260 >gi|253583347|ref|ZP_04860545.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725] gi|251833919|gb|EES62482.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725] Length = 295 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 130/249 (52%), Gaps = 18/249 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E+I + +KY + +GGKRLRP+L +L+ + + A AIE IH+ +L+HDD+ + Sbjct: 29 EVIAEGMKYAVLNGGKRLRPILLFMVLDILDCDKEKGIASAAAIEMIHSYSLVHDDLPAL 88 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACT----- 139 D+ RRGK+ +G +L+GD LL+ AF ++ E K A + + +V T Sbjct: 89 DNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFYILTEKNKHLPAEKIVEIVRLTSSYAG 148 Query: 140 ---LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + G++ + S K +D+ Y+H +KT L +E++ +I R+ L Sbjct: 149 INGMIGGQMVDIASEGKKIDLETLKYMH--SNKTGKLMKLPVELACIIGDADREEREVLV 206 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + +G+AFQ+ DD+LD G+ + +GK +G D GK T P ++ G K K Sbjct: 207 KFSELIGLAFQIKDDILDIEGDFSTLGKPVGSDIELGKSTYPSLI----GMAESKTLLKE 262 Query: 256 TINDGKISV 264 TI + K+ V Sbjct: 263 TIAEAKMIV 271 >gi|300362327|ref|ZP_07058503.1| possible trans-hexaprenyltranstransferase [Lactobacillus gasseri JV-V03] gi|300353318|gb|EFJ69190.1| possible trans-hexaprenyltranstransferase [Lactobacillus gasseri JV-V03] Length = 338 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 133/240 (55%), Gaps = 8/240 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP---MLTLATALMLEYRGDNHVL 66 KD+ ++N +ILK + S ++ ++ GK LRP ML A + + D Sbjct: 23 KDIIEINQIILKHVNSVPGLLGQALEDTFAVPGKMLRPACVMLFGAFGPDADQKQDELKK 82 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L A + + +++ Sbjct: 83 IATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLF--ALSLTLLSEN 140 Query: 127 QEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 ++L ++ T+ GE Q + + N++++E++YL+ IK KT VLF A + + Sbjct: 141 AQSLHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLNQIKGKTGVLFGLACFIGAYE 200 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G++ + K +G LG AFQL DD+LDY + K + D ++G + P+I A Q Sbjct: 201 SGIKVTKALKAKQFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFALQ 260 >gi|42518501|ref|NP_964431.1| hypothetical protein LJ0408 [Lactobacillus johnsonii NCC 533] gi|41582786|gb|AAS08397.1| hypothetical protein LJ_0408 [Lactobacillus johnsonii NCC 533] Length = 350 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 75/245 (30%), Positives = 132/245 (53%), Gaps = 14/245 (5%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH--- 64 T KDM +N +ILK + + ++ D +K S GK LRP + L + + H Sbjct: 33 TQKDMIAINRIILKHVNTVPGLLGDALKDTFASPGKMLRPACVM---LFGSFGPNGHEKR 89 Query: 65 ---VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L A + Sbjct: 90 KELQKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLF--ALSLT 147 Query: 122 IETKSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 + +++ ++L ++ T+ GE Q + + ++++E++YL IK KT VLF A Sbjct: 148 LLSENAQSLHSVIADGKTMQNILVGETEQYNNAYKINISEKEYLDQIKGKTGVLFGLACF 207 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + +G++ + K +G LG AFQL DD+LDY + K + D ++G + P+ Sbjct: 208 IGAYESGLKVTKALKAKKFGDYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPL 267 Query: 239 ILAFQ 243 I A Q Sbjct: 268 IFALQ 272 >gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16] gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16] Length = 293 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 81/228 (35%), Positives = 123/228 (53%), Gaps = 22/228 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDD 87 + ++Y + +GGKR+RP+L L + M GD V L ACA+E IHT +L+HDD+ +DD Sbjct: 36 EAMEYSLMAGGKRIRPVLVLESCRMC--GGDPEVALPFACAVEMIHTYSLIHDDLPAMDD 93 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVAC-TLAEGE 144 LRRG+ +V+G T++L GD LL+ AF + + + +Q+ ++A VAC +LA G Sbjct: 94 DELRRGRPTNHMVYGEATAILAGDGLLTAAFQTLTQAQLTAQQVVDA---VACLSLAAGP 150 Query: 145 --------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L ++L E + L +K T L +AA E+ + AG R++++ Sbjct: 151 DGMVGGQALDMAGEGRSLTRAELEQLQSLK--TGALIAAAAELGCIAAGGSPEQRESVRQ 208 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y LG AFQ+ DD+LD E+GK G D K T +L R Sbjct: 209 YAQCLGRAFQVQDDILDVTSTDEELGKPTGSDREKEKNTFVSLLGLDR 256 >gi|219847821|ref|YP_002462254.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485] gi|219542080|gb|ACL23818.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485] Length = 361 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 160/318 (50%), Gaps = 15/318 (4%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L D+ + +L+ S V +I + + SGGKRLR L + A + Y+ + + A Sbjct: 51 LADLGAIEQRLLELTHSRVAVISAAGAHTVRSGGKRLRAALAVLAARLGHYQLNRVIHPA 110 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A E IH A+L+HDD+VD + RRG++ W N +++VGD+ + A + + Sbjct: 111 AAAELIHAASLVHDDLVDQANRRRGQITVHARWDNDVALMVGDYFFALAAAEMARSPDPR 170 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + T+ EGEL +++++ LD YL+ +KTAVLF AA + + G + Sbjct: 171 IITFYAEAVQTICEGELSPVTVAEPLDRALRQYLYKTGAKTAVLFEAACKAGMVSGGGSD 230 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 AL YG +LG+AFQ++DDVLD+ G+ +GK G D R G TLP+I A T Sbjct: 231 DQILALGRYGYDLGMAFQIIDDVLDFIGDERMLGKPAGNDLRQGTITLPLIYA----TAA 286 Query: 249 EKN------FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 N + D +S E +++ +I A TE A Y ++A L P Sbjct: 287 SPNPLLREVLMHNPPPDPLVS-EVIRE--VIAVGGVAAAQTE--AERYIEQAIAHLDIFP 341 Query: 303 DSSWKKSLMEVVDFCLQR 320 +++L+++ F ++R Sbjct: 342 PGPARQALIDIAHFVIER 359 >gi|91773215|ref|YP_565907.1| polyprenyl synthetase [Methanococcoides burtonii DSM 6242] gi|91712230|gb|ABE52157.1| geranylgeranyl pyrophosphate synthetase [Methanococcoides burtonii DSM 6242] Length = 300 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 77/260 (29%), Positives = 141/260 (54%), Gaps = 17/260 (6%) Query: 20 LKRICSDVEMIPD---VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 + + SD++ P VV ++ SGGK++RP++ L + + +N A AIE IH+ Sbjct: 16 MNEMISDMDDSPQMKKVVGHICRSGGKKVRPIILLLASRICGKGSENCTNAALAIELIHS 75 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+L+HDD++D+ +RRG +A +G ++L GD+++S++ +I S ++ Sbjct: 76 ASLIHDDILDEGVMRRGVESAHKKFGPAAAMLAGDYMISKSI-ELISIYSTPVVQEFGRA 134 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 +AEGE + S + D E +Y I KTA LF+A+ + + IAG LK+ Sbjct: 135 GMAMAEGETIDIK-STSEDFAEMNYFDCIDKKTASLFAASAVMGAYIAGADEKTASKLKN 193 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 YG LG A+Q+VDD+L+Y +NI ++ ++ ++ ++ ++R E K+ Sbjct: 194 YGRKLGRAYQIVDDLLEYT-------QNI-DNKKSDNKSISILQIYRRTMPYESAVEKAI 245 Query: 257 INDGKISVENLKKAFIIMRE 276 + +++EN++ A I+ E Sbjct: 246 L----LAMENVRMAKDILEE 261 >gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9] gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9] Length = 309 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 12/222 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKR+RP+L LAT M+ + ACA+E IHT +L+HDD+ + Sbjct: 43 EKIYEAMRYSLLAGGKRVRPILCLATCEMIGGTIGMAMPTACAMEMIHTMSLIHDDLPAM 102 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------- 136 D+ RRGK+ V+G ++L GD LL+ +F V Q +L Sbjct: 103 DNDDYRRGKLTNHKVYGEDVAILAGDGLLALSFEFVATQTPQTVPPDRTLQVIARMGSAS 162 Query: 137 -ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L+ +++ E + KTA L A++ +IAG Q L Sbjct: 163 GAPGLVGGQVVDLASEGQSNISLETLNFIHNHKTAALLEASVVCGGIIAGASPQDIQKLT 222 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 Y N+G+AFQ++DD+LD ++GK G+D + K T P Sbjct: 223 CYSQNIGLAFQIIDDILDITATKEQLGKTAGKDIESAKVTYP 264 >gi|315640540|ref|ZP_07895648.1| putative trans-hexaprenyltranstransferase [Enterococcus italicus DSM 15952] gi|315483744|gb|EFU74232.1| putative trans-hexaprenyltranstransferase [Enterococcus italicus DSM 15952] Length = 326 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 91/313 (29%), Positives = 147/313 (46%), Gaps = 15/313 (4%) Query: 20 LKRICSDVEM--------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLA 68 L+ +CS +E I D + +GGK LRP A + + + N + +A Sbjct: 15 LQVVCSFLEKQLTVRNKDIQDALVEFSQAGGKYLRPAFFFLFAELGDPKKQNEEELIKVA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +IE +H ATL+HDD++DDS LRRG + + +G +V GD L + F ++I+ + Sbjct: 75 SSIELLHMATLIHDDIIDDSPLRRGTLTVQAHYGKDIAVYTGDLLFTLFFEVLIDVMNGS 134 Query: 129 ALEALSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A + A L GEL Q++L N++ T +DYL + KTA LF A + Sbjct: 135 PFMATNAQAMKGLLLGELDQMNLRYNVNQTIDDYLLSVNGKTAELFWLACLEGAHFGKTS 194 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + G N+GIAFQ DD+LDY + K + ED G T+P++LA TK Sbjct: 195 PQIEALAGEIGRNIGIAFQAYDDILDYTANEAILQKPVLEDLTQGVYTIPLLLA---KTK 251 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 F ++ K+ ++ + + + A SY +KA ++ LP + + Sbjct: 252 NPAAFAPLLEKRANLTEAEAKEVAALVVHYQGVEQAKAFARSYTEKALAGIQELPAGAAR 311 Query: 308 KSLMEVVDFCLQR 320 + L + L+R Sbjct: 312 EQLERLTKQLLKR 324 >gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413] gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413] Length = 309 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 121/230 (52%), Gaps = 14/230 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L LAT+ M+ + + ACA+E IHT +L+HDD+ + Sbjct: 43 EKIYESMRYSLLAGGKRLRPILCLATSEMMGGTIEIAMPTACAVEMIHTMSLIHDDLPAM 102 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----------ALS 134 D+ RRG + V+G+ ++L GD LL+ AF V ++ E++ + Sbjct: 103 DNDDYRRGMLTNHKVYGDDIAILAGDGLLAYAFEFV-AIRTPESVPRDRVLQVVARLGRA 161 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L A L G++ L D++ E + KTA L A + ++AG + Q L Sbjct: 162 LGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHKTAALLEACVVCGGILAGASSEDVQRL 221 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y N+G+AFQ++DD+LD ++GK G+D K T P + ++ Sbjct: 222 SRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKDLLAKKVTYPSLWGIEQ 271 >gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426] gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus] gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Geobacillus kaustophilus HTA426] Length = 297 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 17/236 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + Y + +GGKR+RP+L LAT L + +ACAIE IHT +L+HDD+ + Sbjct: 32 ETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDDLPSM 91 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEALSLVA 137 D+ LRRGK V+G ++L GD LL+ AF ++ E + +E L+ A Sbjct: 92 DNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLIAEVDDDRVPPSVRLQLIEQLAKAA 151 Query: 138 CT--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G+ + K L + E +Y+H + KT + ++ +L+ G + L Sbjct: 152 GPEGMVAGQAADMEAEGKTLALAELEYIH--RHKTGKMLQYSVHAGALLGGADGRQTREL 209 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +LG+AFQ+ DD+LD G ++GK +G D N K T P +L+ G +EK Sbjct: 210 NEFAAHLGLAFQIRDDILDIEGMEEKIGKRVGSDRDNKKATYPALLSL--GGAKEK 263 >gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 291 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 117/213 (54%), Gaps = 11/213 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y + +GGKRLRP+L +A A + G + +ACA+E IHT +L+HDD+ +D+ Sbjct: 33 AMAYSLMAGGKRLRPVLLMAAADAVGGDGAKFLSVACALEMIHTYSLIHDDLPAMDNDDY 92 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAE 142 RRGK+ V+G+ ++L GD LL+ AF +++ + A L +V A + Sbjct: 93 RRGKLTNHKVFGDGIAILAGDGLLTLAFTVILRQQDVSADTLLRVVDEISRAAGAEGMVG 152 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G++ L ++ ++ E+ V KT LF AAL +++ G + +L +Y G Sbjct: 153 GQVLDLRAEEHR-ISMEEMRRVHMGKTGALFRAALRSGAILGGASEAQLASLTTYAEQFG 211 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +AFQ+ DD+LD G ++GK +G D +N K T Sbjct: 212 LAFQITDDILDVVGTAEDIGKPVGSDEKNHKST 244 >gi|262068286|ref|ZP_06027898.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693] gi|291378024|gb|EFE85542.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693] Length = 298 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 32/277 (11%) Query: 13 EKVNFLILKRIC-----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 EK NF + S E I ++Y + +GGKRLRP L T +L V Sbjct: 11 EKTNFFETELKKELEELSYPETIAKGMEYALLNGGKRLRPFLLFTTLELLNQDIQKGVKS 70 Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A IE IH+ +L+HDD+ +D+ RRGK+ V+G ++L+GD LL+ AF M+ Sbjct: 71 AIGIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILIGDALLTYAFYML---- 126 Query: 126 SQEALEALS------LVACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTA 170 SQ+ L LS +++ T A + + + +D+ E+ Y+H K KT Sbjct: 127 SQKNLNLLSFEQITNIISKTSAYAGINGMIGGQMIDIESENKKINLETLKYIH--KHKTG 184 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L +E++ +IAGV R L+ Y +G+AFQ+ DD+LD G E+GK +G D Sbjct: 185 KLIKLPIEIACIIAGVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFEELGKPVGSDDD 244 Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 K T P IL G K K T+ K + N+ Sbjct: 245 LHKATYPSIL----GMKESKKILNETVERAKKIIHNM 277 >gi|164605004|dbj|BAF98298.1| geranyl-diphosphate synthase [Hevea brasiliensis] Length = 330 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 81/228 (35%), Positives = 116/228 (50%), Gaps = 19/228 (8%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALMLEYR-------GDN-------- 63 + S+V + +Y G GKRLRP +L +ATAL + GD Sbjct: 96 LVSEVPKLASAAEYFFKMGVEGKRLRPTVLLLMATALNVHIHEPMPNGVGDTLGAELRTR 155 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A E IH A+LLHDDV+DD+ RRG + V GN+ +VL GDFLLS+A + Sbjct: 156 QQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVAVLAGDFLLSRACVALAS 215 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ E + L+ V L GE Q++ + + + Y+ KTA L S + + +L+ Sbjct: 216 LKNTEVVSLLATVVEHLVTGETMQMTSTSEQRCSMDHYMQKTYYKTASLISDSCKAIALL 275 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 AG V YG +LG+AFQL+DDVLD+ G +GK D R+ Sbjct: 276 AGQTTEVAMLAFEYGKSLGLAFQLIDDVLDFTGTSASLGKGSLSDIRH 323 >gi|326200897|ref|ZP_08190769.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] gi|325988465|gb|EGD49289.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] Length = 335 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 87/312 (27%), Positives = 142/312 (45%), Gaps = 12/312 (3%) Query: 19 ILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 I + IC SD+ + Y+ GK LR ++ L N + +A E +HT Sbjct: 24 ISESICDSDLPLYSAARHYM--GKGKHLRALMLLLACGATGGEPSNAIDIAAGHEILHTF 81 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---------CMVIETKSQE 128 +L+ DD++D S RRG + +G T++L D+L +AF K Sbjct: 82 SLVQDDIMDKSEKRRGTDTVHIKYGLDTAILSADYLFLKAFESFNINFINHEFDNAKRSR 141 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L+ + + + EG+ L+ + + E+DYL +I KTAV F + +IA Sbjct: 142 LLKEILELGMVICEGQFLDLNFERKFSLAEDDYLDMIYKKTAVFFEKVCTIGGIIADTSE 201 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 ++ G LG+AFQ+ DD+L + G+ + K++ D GK TLP+I Q+ + Sbjct: 202 ENIHSISEMGKCLGMAFQIKDDMLSFFGDEKVVEKSLVSDVEGGKITLPIIYVLQKASTS 261 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 EK+F K+ + N+ I++ E A Y +AKD L LP S + Sbjct: 262 EKDFIKNLFEKQHVEPGNIDCLKKILQSYDVEDYAEGIAMKYISRAKDKLAELPYSYEIQ 321 Query: 309 SLMEVVDFCLQR 320 L +++F L R Sbjct: 322 ILDGLLNFALYR 333 >gi|152990770|ref|YP_001356492.1| polyprenyl synthetase [Nitratiruptor sp. SB155-2] gi|151422631|dbj|BAF70135.1| polyprenyl synthetase [Nitratiruptor sp. SB155-2] Length = 296 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 117/208 (56%), Gaps = 21/208 (10%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK LR L L A + E + + IE IH A+LLHDDV+DD+ RRG + V Sbjct: 31 GKMLRSKLILNIAPVPE-----AIHTSAIIELIHMASLLHDDVIDDADTRRGNPSVNAVL 85 Query: 102 GNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 GN+ ++++GD L ++AF + +T +Q +A++L++ GEL+ + LSK+ Sbjct: 86 GNKPAIMIGDILYAKAFYELSSLPKTLAQTISQAVALLSL----GELKDVELSKSFQPDI 141 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS---YGMNLGIAFQLVDDVLDYR 215 E Y+ +I KTA L A+ ++ ++G + LKS YG LG+AFQ+VDD+LD Sbjct: 142 EAYMDMIYKKTASLIEASAISAAYLSG------KDLKSYGEYGKKLGLAFQIVDDILDII 195 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + +GK + DF GK TLP I ++ Sbjct: 196 SDEETLGKPVLNDFYEGKTTLPYIYLYE 223 >gi|258515780|ref|YP_003192002.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 296 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 128/241 (53%), Gaps = 18/241 (7%) Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 +L+ + C E+I ++Y IF+GGKRLRP + +A A + D + ACA+E IHT Sbjct: 21 YLLPESSCP--EIIHRAMRYSIFAGGKRLRPAMLIAAAEAVGGSADKVMPAACALELIHT 78 Query: 77 ATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-- 132 +L+HDD+ RRGK V+G ++L GD LL+ +F ++ + + Sbjct: 79 YSLIHDDLPSMDDDDYRRGKPTNHKVFGEAMAILAGDALLTMSFQLLAGLSGRNGIAPAD 138 Query: 133 -------LSLVACT--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +S A T L G++ + S ++ +D +Y+H KT LF AA+ ++ Sbjct: 139 VVRVIADISAAAGTTGLIGGQVVDIVSANQEIDAGTLEYIHT--KKTGALFRAAIRSGAV 196 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++G + ++L +Y + G+AFQ+ DD+LD G++ + GK +G D +N K T P + Sbjct: 197 LSGADDEELKSLTNYAEHFGLAFQITDDILDVAGDMQKTGKPVGSDEKNNKATYPALYGL 256 Query: 243 Q 243 + Sbjct: 257 E 257 >gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1] gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1] Length = 297 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 79/239 (33%), Positives = 124/239 (51%), Gaps = 16/239 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + Y + +GGKR+RP+L AT D + +ACAIE IHT +L+HDD+ + Sbjct: 32 ETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSM 91 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--------LEALSLVA 137 D+ LRRGK V+G ++L GD LL+ AF ++ E +E L+ A Sbjct: 92 DNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEANDARISPMTKIRLIEELAKAA 151 Query: 138 CT--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G++ + S K L + + +Y+H + KT + ++ +L+A N + L Sbjct: 152 GPEGMVAGQVADIESEGKQLSLEQLEYIH--RHKTGKMLQYSVLAGALLADANNEQLRQL 209 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 + +LG+AFQ+ DD+LD G +MGK +G D N K T P +L G K + +F Sbjct: 210 DLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDMENKKVTYPSLLTIA-GAKEKLSFH 267 >gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A] gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A] Length = 299 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 122/233 (52%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + +GGKRLRP+L LA + + + A A+E IHT +L+HDD+ + Sbjct: 35 EKLRESMRYSLLAGGKRLRPILCLAACELAGGELEKALPTAVALEMIHTMSLIHDDLPSM 94 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLV-------- 136 D+ LRRG+ V+G+ ++L GD LL++AF MV I T+ + L ++ Sbjct: 95 DNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFEMVSIRTEGIPSERLLKIIGELSLAAG 154 Query: 137 ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L K +D+ +Y+H+ KT L A + +LI G + AL Sbjct: 155 APGLVGGQVVDLDCEGKEVDLETLEYIHL--HKTGALLKACVTCGALIGGADEKLLDALS 212 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 Y +G+AFQ++DD+LD +GK G+D K T P +L +R Sbjct: 213 IYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLIADKTTYPKLLGLDESRRR 265 >gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL] gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL] Length = 299 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 82/246 (33%), Positives = 136/246 (55%), Gaps = 15/246 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVL-LACAIEFIHTATLLHDDV 84 E+I ++Y +F+GGKRLRP+L L + M + D +L +A AIE IHT +L+HDD+ Sbjct: 31 EIIYQAMRYSVFAGGKRLRPLLCLLSYQMFSEDKEIDQKILDIASAIELIHTYSLIHDDL 90 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA--FCM--VIETKSQEAL--EALSLV 136 +D+ LRRGK +++G ++L GD LL+ A CM ++ +E L A L Sbjct: 91 PAMDNDVLRRGKPTNHVMFGEAIAILAGDALLNLAAEVCMDWILRYGCRENLIKAAKYLF 150 Query: 137 ACTLAEGELRQLSL---SKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQ 192 + EG + + + D+ E+ L + KT+ L A+ +L+AG ++ V Sbjct: 151 WASGVEGMIGGQVIDITNSGQDIKNEELLFEMHLKKTSRLIQASCVCGALVAGAEDRVVF 210 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+ YG NLG+AFQ+ DDVLD G+ ++GK+IG+D + K T ++ + +++ Sbjct: 211 DLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGKDIKEKKSTFVTFYGLEKAQQLVEHY 270 Query: 253 WKSTIN 258 + I+ Sbjct: 271 SQKAID 276 >gi|238853177|ref|ZP_04643564.1| farnesyltranstransferase [Lactobacillus gasseri 202-4] gi|238834231|gb|EEQ26481.1| farnesyltranstransferase [Lactobacillus gasseri 202-4] Length = 338 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 164/326 (50%), Gaps = 27/326 (8%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP---MLTLATALMLEYRGDNHVL 66 KDM +++ +IL + S ++ ++ GK LRP ML A + + D Sbjct: 23 KDMIEISHIILTHVNSVPGLLGQALEDTFAVPGKMLRPACVMLFGAFGPDADQKHDELQK 82 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L A + + +++ Sbjct: 83 IATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLF--ALSLTLLSEN 140 Query: 127 QEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 ++L ++ T+ GE Q + + N+D++E++YL IK KT VLF A + + Sbjct: 141 AQSLHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFGLACFIGAYE 200 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G++ + K +G LG AFQL DD+LDY + K + D ++G + P+I A Q Sbjct: 201 SGIKVTKALKAKKFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFALQ 260 Query: 244 RG--------TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 K EK+ + +++ +ENL + + L D Y +KA Sbjct: 261 NDDNNHLHELVKIEKDLTQDQLHE----IENLVNHLGGVERAQKLAD------QYTEKAL 310 Query: 296 DSL-RCLPDSSWKKSLMEVVDFCLQR 320 SL + PD+ + + ++ L+R Sbjct: 311 ASLKKHWPDNENRALIEQLTGRLLKR 336 >gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18] gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18] Length = 295 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 19/256 (7%) Query: 20 LKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L+R D + +P ++Y +F+GGKR+RP+L LA + + ACA+E IH Sbjct: 18 LERYLPDGKELPASLHGAMRYSVFAGGKRVRPVLMLAACEAVGGSPQAVMPAACAMEMIH 77 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEA 132 T +L+HDD+ +D+ RRG V+G T++L GD LL++AF ++ + + Sbjct: 78 TYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTEAFILLSANGEGGDPAAR 137 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEE----------DYLHVIKSKTAVLFSAALEVSSL 182 L ++ R + + +D+ E Y+H KT L A++ ++ Sbjct: 138 LRVIQEIAVASGSRGMVGGQVVDMESEGRHDVDLATLSYIHT--HKTGALIRASVRSGAI 195 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + G +AL Y +G+AFQ+ DD+LD G E+GK+ G D GK T P ++ Sbjct: 196 MGGASEEQFKALTRYADAIGLAFQIADDILDVEGTTEELGKDAGSDQARGKATYPALMGL 255 Query: 243 QRGTKREKNFWKSTIN 258 + R + + ++ Sbjct: 256 EASKARARELVQIALD 271 >gi|167756949|ref|ZP_02429076.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402] gi|237734652|ref|ZP_04565133.1| geranyltranstransferase [Mollicutes bacterium D7] gi|167703124|gb|EDS17703.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402] gi|229382472|gb|EEO32563.1| geranyltranstransferase [Coprobacillus sp. D7] Length = 282 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 75/237 (31%), Positives = 134/237 (56%), Gaps = 12/237 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + +KY + +GGKR+RP++ L + +++ +ACAIE IHT +L+HDD+ +D+ Sbjct: 24 VKEAMKYSLMAGGKRIRPVMMLQVIRSYDKNYQDYLDIACAIEMIHTYSLIHDDLPGMDN 83 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRG++ + T++L GD LL++A ++I+TK + L+ +SL+A + Sbjct: 84 DDLRRGRLTCHKQFDEATAILAGDALLNEAVNVIIKTKVPDELK-ISLLATLYQASGING 142 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + L + LD+ E D L +I KT L SAA+++ +LIA + ++ G Sbjct: 143 MILGQALDMEYETKLATRDQLDLIHHHKTGDLISAAMKMGALIANPDD--QKTWVEIGYK 200 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DDVLD G+ + +GK +G D N K T ++ ++ + ++K + Sbjct: 201 IGLAFQIQDDVLDVVGDSSLLGKKVGSDQVNHKSTYVTLMGVEQSQMIVEQYFKEAM 257 >gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110] gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110] Length = 309 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 84/269 (31%), Positives = 139/269 (51%), Gaps = 22/269 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E I + ++Y + +GGKRLRP+L L T ++ + + ACA+E IHT +L+HDD+ Sbjct: 44 EKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAM 103 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVA------- 137 RRGK+ V+G ++L GD LLS AF V +T++ + ++++A Sbjct: 104 DDDDYRRGKLTNHKVYGEDIAILAGDALLSYAFEYVATQTRNVDLANLMNVIARLGRTVG 163 Query: 138 -CTLAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L G++ L LDVT + ++H+ KT L ++ +++AG + + L Sbjct: 164 AAGLVGGQVLDLESEGKLDVTVDTLKFIHI--HKTGALLETSVVSGAILAGAKQEDVERL 221 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 Y N+G+AFQ++DD+LD E+GK G+D R+ K T P + + K+ + Sbjct: 222 SRYAQNIGLAFQIIDDILDVTASTEELGKTAGKDQRDKKATYPSLWGLEESQKQAQALID 281 Query: 255 STIND----GKISVENLK--KAFIIMREN 277 I G+ S + LK FI+ R+N Sbjct: 282 DAIAQVDPYGQ-SAQPLKAIAQFIVARKN 309 >gi|52549424|gb|AAU83273.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured archaeon GZfos27B6] Length = 360 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 8/243 (3%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 L+ GGKRLRP L L ++ + A IEF H +L HDD+ DDS LRRG+ A Sbjct: 57 LLGRGGKRLRPSLCLMACELVGGEIKKALPTAICIEFFHNFSLAHDDIEDDSKLRRGEPA 116 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETK-------SQEALEALSLVACTLAEGELRQLS 149 + +G +V GD L + ++ + + + + E ++ + L+EG+ L Sbjct: 117 LHVKYGIPIAVNAGDGLYALSYEALKANRNLLGLERAWKIFEEIAELCVVLSEGQAMDLE 176 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + ++ E + + ++ KTA LF + + ++ G + + L S ++GIAFQ+ D Sbjct: 177 FKERKEMGELEVIETLRKKTAKLFGVSAKCGAIAGGASHETAEDLSSAWEDIGIAFQIRD 236 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK-NFWKSTINDGKISVENLK 268 D+L+ GE + GK IGED GKPTL ++ + REK N ++ N K +E + Sbjct: 237 DILNVLGEEEKYGKRIGEDIAEGKPTLLLVNCLEHCEAREKENIYECFHNYDKAKIEEVV 296 Query: 269 KAF 271 F Sbjct: 297 DLF 299 >gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila UWE25] gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia amoebophila UWE25] Length = 294 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 79/259 (30%), Positives = 130/259 (50%), Gaps = 18/259 (6%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACA 70 ++++ L+ KR +I + +Y + SGGKRLRP+L L T L GD L AC Sbjct: 17 KRLDQLVSKRHGPHQNLI-EAARYALLSGGKRLRPILALTTVQTLH--GDIQEALSPACT 73 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E IHT +L+HDD+ +D+ RRGK+ + +VL GDFLL+ AF ++ K Sbjct: 74 LELIHTYSLIHDDLPCMDNDDYRRGKLTVHRQYSEGHAVLTGDFLLTYAFELLATDKYLT 133 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEV 179 + + + L+ + + + LD+ E LH ++KTA L +A++E Sbjct: 134 SEKKVKLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLLH--RNKTAALITASVEF 191 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++A ++ +G N+G+AFQ+ DD+LD + G+ IG D K T + Sbjct: 192 GGILANATEEQLAHIREFGENIGLAFQITDDILDITSSEAKHGRKIGSDILKDKSTYVSL 251 Query: 240 LAFQRGTKREKNFWKSTIN 258 L ++ NF++ IN Sbjct: 252 LGIEQAKAYALNFYQKAIN 270 >gi|323481190|gb|ADX80629.1| polyprenyl synthetase family protein [Enterococcus faecalis 62] Length = 326 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 86/295 (29%), Positives = 145/295 (49%), Gaps = 9/295 (3%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFI 74 LI + + + E I + + L SGGK LRP L L E + + LL A ++E + Sbjct: 21 LIEQTLHTRNEDIEEALVSLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEAL 133 H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ + E ++ Sbjct: 81 HMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNGSEFMKIN 140 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L GEL Q+S + ++ YL + KT LFS + + V++ Sbjct: 141 AQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTGELFSLSCLEGAYFGHSSKEVQRL 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+Q + + Sbjct: 201 AKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQAA----PDVF 256 Query: 254 KSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ G+ I++E + ++ + + + + A KA ++ LPD + K Sbjct: 257 SPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAK 311 >gi|313231697|emb|CBY08810.1| unnamed protein product [Oikopleura dioica] Length = 344 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 163/318 (51%), Gaps = 20/318 (6%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSG-GKRLRPMLT--LATAL--MLEYRGDNHVLL 67 +K+ F ++ +D E+ P Y F G GK +RP++ +A AL +E N L Sbjct: 35 DKIKFAMIPEDTTD-EIYPMACYY--FDGSGKSIRPLIVGRIAEALGGCIE---TNEKLQ 88 Query: 68 ACAI--EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A+ E IHT +L+HDDV+D S RRGK +A WG +V+ G++++S + ++ + Sbjct: 89 KVAMIAEMIHTGSLVHDDVIDKSEERRGKASANSKWGVTKAVMAGNYIISYSSQLLASLE 148 Query: 126 SQEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 S E + +S + L GEL QL S++ N + + Y+ KTA L + + E +++ Sbjct: 149 SDEVTKIISRIIEDLIYGELCQLESVNSNHEHRYKQYIKKTYLKTASLIANSAEAVAVLT 208 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V+QA ++G LGIAFQ+ DD LD+ + ++GK D + G T PV+ A Q Sbjct: 209 DQPAHVQQAAFNFGKYLGIAFQIQDDRLDFLADSEQLGKPACADLKLGLSTAPVLYACQ- 267 Query: 245 GTKREKNFWKSTINDGKISVENLKKAF-IIMRENRALVDTEYRAYSYGQKAKDSLRCL-P 302 E W + S +++KA II R + AL+ T A +Y ++A + L Sbjct: 268 --THEGEMW-PLMKRRFTSPGDVQKAHNIITRRSDALLKTRLLAENYAKRAAREIDMLTA 324 Query: 303 DSSWKKSLMEVVDFCLQR 320 D K++L+E+ R Sbjct: 325 DPVLKENLLELTKMVTNR 342 >gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii] gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii] Length = 345 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 18/245 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV- 84 E + + ++Y + +GGKR+RP L LA ++ GD H L ACA+E +HT +L+HDD+ Sbjct: 80 ETLNESMRYSLLAGGKRVRPALCLAACELVG--GDIHAALPAACAMEMVHTMSLIHDDLP 137 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 +D+ RRG+ V+G ++L GD LLS +F + E + V L + Sbjct: 138 SMDNDDFRRGRPTNHKVYGEDIAILAGDALLSFSFEHIARATKGVPAERVLRVIMELGKA 197 Query: 144 ELRQ-LSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L + +D+ ED Y+H + KTA L A++ +++ G S + Sbjct: 198 VGQDGLVAGQVVDIQSEDKEVGLDVLKYIH--EHKTAALLEASVVCGAILGGADESTIEK 255 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L+ Y +N+G+AFQ++DD+LD ++GK +D K T P +L ++ + + Sbjct: 256 LRKYSLNIGLAFQVIDDILDVTATTEQLGKTAAKDLAVNKTTYPKLLGLEKSKQVADDLI 315 Query: 254 KSTIN 258 K I Sbjct: 316 KEAIQ 320 >gi|295399115|ref|ZP_06809097.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|294978581|gb|EFG54177.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93] Length = 297 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 79/239 (33%), Positives = 124/239 (51%), Gaps = 16/239 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + Y + +GGKR+RP+L AT D + +ACAIE IHT +L+HDD+ + Sbjct: 32 ETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSM 91 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--------LEALSLVA 137 D+ LRRGK V+G ++L GD LL+ AF ++ E +E L+ A Sbjct: 92 DNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEADDARISPMTKIRLIEELAKAA 151 Query: 138 CT--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G++ + S K L + + +Y+H + KT + ++ +L+A N + L Sbjct: 152 GPEGMVAGQVADIESEGKQLSLEQLEYIH--RHKTGKMLQYSVLAGALLADANNEQLRQL 209 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 + +LG+AFQ+ DD+LD G +MGK +G D N K T P +L G K + +F Sbjct: 210 DLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDIENKKVTYPSLLTIA-GAKEKLSFH 267 >gi|256082061|ref|XP_002577281.1| prenyl transferase; trans-prenyltransferase [Schistosoma mansoni] gi|238662587|emb|CAZ33518.1| prenyl transferase [Schistosoma mansoni] Length = 409 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 99/343 (28%), Positives = 166/343 (48%), Gaps = 36/343 (10%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML-TLATA-----------L 55 LKD+ + I +C + D+++Y S GK +RP+L TLA A L Sbjct: 71 ALKDLHLIVSEIKHSLCPAFPVFRDLLRYQFESQGKLVRPLLVTLAAACANSHIECNSPL 130 Query: 56 MLEYRGD---------------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 ++ Y H + A E IHTA+L+HDD++D +A+RRGK +A Sbjct: 131 IVRYESPETDDVRNLAYLVSPKQHEIAKIA-EMIHTASLIHDDLIDSAAVRRGKTSAYKA 189 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL-SKNLDVTEE 159 +G++ +VL GDF+L+ + ++ + + LS V L GE+ QL+ S + D + Sbjct: 190 FGHREAVLGGDFILTHSSRLLAQIGDTGVIAVLSQVIEDLIHGEMMQLAPNSDDDDKRFQ 249 Query: 160 DYLHVIKSKTAVLFSAALEVSSL--IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 YL KTA L + + + ++ + + + +G +LG+AFQL+DDVLD+ + Sbjct: 250 TYLTKTYRKTASLIANSCKAVAMLTVPTLSQWHIDNMYEFGEHLGMAFQLIDDVLDFVTD 309 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 +GK G D + G T PV+ A QR + + DG + ++A +++++ Sbjct: 310 EANLGKPTGADLQMGLATGPVLFAAQRYPELNAILLRQFSLDG-----DTERALELVKQS 364 Query: 278 RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + T A + Q A+ L DS +K+L+ V LQR Sbjct: 365 DGVGQTRMLAEFHFQAAQRCLFQFRDSLSRKALLHVAANFLQR 407 >gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum V4] gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum V4] Length = 300 Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 14/227 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 ++ + + Y +FSGGKRLRP+L LA A + D + +ACA+E IHT +L+HDD+ +D Sbjct: 37 ILHEAIDYCLFSGGKRLRPILCLAGAHAVCRNSDCALPMACAVECIHTYSLVHDDLPSMD 96 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETK---SQEALE-ALSLVA 137 + RRGK + ++G ++L GD LL+ AF C + SQ E A + + Sbjct: 97 NDDFRRGKPSLHKIYGEALAILTGDALLALAFEVASLCSPLGRTYPVSQMIWELARTAGS 156 Query: 138 CTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ L K + +T+ Y+H KTA L + +L + ++ A + Sbjct: 157 RALVAGQVADLEAEGKEIGLTQLRYIHC--RKTAALITTSLRLGAMAADADKKTLDLITR 214 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 YG LG+AFQ++DD+LD +GK+ G+D + K T P I+ + Sbjct: 215 YGRALGLAFQIIDDILDVTQTTEILGKSAGKDQKAKKATYPRIMGLE 261 >gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430] Length = 295 Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 74/235 (31%), Positives = 123/235 (52%), Gaps = 11/235 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 + Y + +GGKRLRP+L +A A + G + ACA+E IHT +L+HDD+ +D+ R Sbjct: 38 MAYSLMAGGKRLRPILLMAAADAVGADGTKFITAACALEMIHTYSLIHDDLPAMDNDDYR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEG 143 RGK+ + T++L GD LL+ AF +++ + A L +V A + G Sbjct: 98 RGKLTNHKAYDEGTAILAGDALLTLAFTVILRQQDVPAERLLRIVDEISRSAGAEGMVGG 157 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 ++ L ++N ++ E+ V KT LF AAL +++AG AL +Y + G+ Sbjct: 158 QMLDLE-AENRRISMEELQRVHMGKTGALFRAALRSGAILAGASEQQLAALTTYADHFGL 216 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 AFQ+ DD+LD G ++GK +G D +N K T + + + +S ++ Sbjct: 217 AFQITDDILDVVGTAEDIGKPVGSDEKNHKSTYVTLTSLDEAQSLARQTVESAVD 271 >gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 299 Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 80/246 (32%), Positives = 137/246 (55%), Gaps = 15/246 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVL-LACAIEFIHTATLLHDDV 84 E+I ++Y +F+GGKRLRP+L L + ML + D +L +A AIE IHT +L+HDD+ Sbjct: 31 EIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQEVDQKILDIASAIELIHTYSLIHDDL 90 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA--FCM--VIETKSQEAL--EALSLV 136 +D+ LRRGK +V+G ++L GD LL+ A CM ++ ++ L A L Sbjct: 91 PAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWILRYGCEKNLVKAAKYLF 150 Query: 137 ACTLAEGELRQLSL---SKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQ 192 + EG + + + D+ E+ L + KT+ L A+ +L+AG ++ V Sbjct: 151 WASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVY 210 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 ++ +G NLG+AFQ+ DD+LD G+ ++GK+IG+D + K T ++ + +++ Sbjct: 211 DMEEFGKNLGLAFQIRDDILDVIGDSKKVGKSIGKDIKEKKNTFVTFYGLEKAQQLVEHY 270 Query: 253 WKSTIN 258 + I+ Sbjct: 271 SQKAID 276 >gi|257416435|ref|ZP_05593429.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG] gi|257158263|gb|EEU88223.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG] Length = 326 Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 86/295 (29%), Positives = 145/295 (49%), Gaps = 9/295 (3%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFI 74 LI + + + E I + + L SGGK LRP L L E + + LL A ++E + Sbjct: 21 LIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEAL 133 H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ + E ++ Sbjct: 81 HMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNGSEFMKIN 140 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L GEL Q+S + ++ YL + KTA LFS + + V++ Sbjct: 141 AQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRL 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 K G ++GIAFQ+ DD+LDY + + K ED G TLP++ A+ + + Sbjct: 201 AKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYHAA----PDVF 256 Query: 254 KSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ G+ I++E + ++ + + + + A KA ++ LPD + K Sbjct: 257 SPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAK 311 >gi|158301264|ref|XP_320978.4| AGAP002069-PA [Anopheles gambiae str. PEST] gi|157012386|gb|EAA01051.4| AGAP002069-PA [Anopheles gambiae str. PEST] Length = 249 Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 5/250 (2%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTA+L+HDDV+D S RRGK + ++W Q GD++L+ M+ + + Sbjct: 4 EMIHTASLVHDDVIDQSFARRGKPSVNVLWNQQQVAQAGDYILAVVSMMLARLQHNDVTL 63 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS + L +GEL QL + + Y KTA L + +L+ +++ GV Sbjct: 64 ILSEILADLVQGELMQLDTKETENERFAHYFARSYRKTASLIANSLKAVAVLTGVGERTA 123 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + YG NLG+AFQLVDD+LD+ MGK D + G T PV+ A ++ + Sbjct: 124 EISFQYGRNLGLAFQLVDDLLDFVSSAEAMGKPAAVDLKLGLATAPVLFACEQFPELNAM 183 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + +G + ++A+ ++ + L T + A + +A+ S ++ +L+ Sbjct: 184 IVRRFRGEG-----DTERAYELVHRSEGLEQTRFLARKHCAEARRLASQFDQSPYQHALV 238 Query: 312 EVVDFCLQRL 321 V DF L R+ Sbjct: 239 VVCDFVLNRM 248 >gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora] gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora] Length = 300 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 126/236 (53%), Gaps = 20/236 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDV--VD 86 + ++Y + +GGKRLRP+L LA E G N + A A+E IHT +L+HDD+ +D Sbjct: 40 EAMRYSLLAGGKRLRPILCLAAC---ELAGGNVAAAMPTAVALEMIHTMSLIHDDLPAMD 96 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE---------ALSLVA 137 + LRRG+ V+G T++L GD LL++AF +V + E +L+ A Sbjct: 97 NDDLRRGRPTNHKVYGEATAILAGDALLTRAFEIVALRSPGVSPECILKVIGELSLAAGA 156 Query: 138 CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ L S K +++ +Y+H+ KT L SA + LI + + QAL++ Sbjct: 157 PGLVGGQMVDLESEGKEVNLDTLEYIHL--HKTGALLSACVICGGLIGDASDELLQALRN 214 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 Y +G+AFQ++DD+LD + +GK G+D K T P +L + +R + Sbjct: 215 YARGIGLAFQIIDDILDVTASSDVLGKTAGKDLVADKTTYPKLLGLKASRERAEQL 270 >gi|330974647|gb|EGH74713.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 131 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 59/118 (50%), Positives = 78/118 (66%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDVRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M++E S E Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSME 130 >gi|325967740|ref|YP_004243932.1| polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28] gi|323706943|gb|ADY00430.1| Polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28] Length = 343 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 87/316 (27%), Positives = 154/316 (48%), Gaps = 26/316 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA--IEFIHTATLLHDDVV 85 E D V Y + +GGKRLRP++TL D V L A +E IH +L++DD++ Sbjct: 29 EDFKDTVIYQVSTGGKRLRPLITLTATRAC--GSDYKVALPAAAIVELIHNYSLIYDDII 86 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGE 144 D++ LRR K+ R +G+ ++L+G + ++ET+ + + + EGE Sbjct: 87 DEALLRRNKLTVRAKYGDNAAILIGIWYREAIEEAILETRDPVSFARETARTIRAIDEGE 146 Query: 145 LRQLSLS-------------------KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + L N + Y+ +I KTA L A+ ++ A Sbjct: 147 RLDILLEYSGRKDPYFVENRLGPRLLSNWESLYNTYIKMISLKTAALIRASSVFGAMSAN 206 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK-PTLPVILAFQR 244 + V+ AL YG LG+AFQ++DD+LD G+V + GK IG+D + K +++A + Sbjct: 207 TPHCVK-ALSDYGTYLGLAFQVLDDILDIFGDVKKFGKEIGKDIKEHKLGNAVIVMALKE 265 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 ++K S + I+ +++KKA I+ + A + A + +K++ SL L ++ Sbjct: 266 LNDKDKEDLLSILGKAAITNDDVKKAVEIISKTNARENASKMAMEFAEKSEKSLNELSNN 325 Query: 305 SWKKSLMEVVDFCLQR 320 + + L E++ F + R Sbjct: 326 EFVEDLREILRFTVTR 341 >gi|224372814|ref|YP_002607186.1| prenyl transferase [Nautilia profundicola AmH] gi|223589295|gb|ACM93031.1| prenyl transferase [Nautilia profundicola AmH] Length = 287 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 65/177 (36%), Positives = 107/177 (60%), Gaps = 4/177 (2%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IH A+LLHDDV+D++ RRG + +G+ T+V++GD + S+AF +I+ Sbjct: 41 LAAVVESIHLASLLHDDVIDEADTRRGAASINAKYGDHTAVMLGDIVYSRAFYELIDF-G 99 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ + +S L++GEL + LS ++++ ++ Y+ +I KTA L AA ++ AG+ Sbjct: 100 KDIAKTVSNAVYLLSQGELEDVKLSNSINLDKDKYMQMIYKKTASLIEAACAAGAISAGL 159 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 R +YG N+GIAFQ++DD+LD + +GK D+ GK TLP I F+ Sbjct: 160 D---RNKFATYGKNIGIAFQIIDDLLDITQDEETLGKPSMHDYYEGKTTLPYIYLFE 213 >gi|328774161|gb|EGF84198.1| hypothetical protein BATDEDRAFT_29284 [Batrachochytrium dendrobatidis JAM81] Length = 356 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 94/337 (27%), Positives = 157/337 (46%), Gaps = 44/337 (13%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALMLEYRGDNHVL-------- 66 I K + S ++ + Y GK +RP++ L AT++ + G + Sbjct: 27 IRKLLGSGHPVLNTISSYYFSKQGKHIRPLVVLLMAQATSITAKMPGSDPFTNSGATILP 86 Query: 67 ----------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 LA E IHTA+LLHDDV+D S RR + +GN+ ++L GDFLL++ Sbjct: 87 EAVILPTQRRLAEITEMIHTASLLHDDVIDISMTRRNTPSVNAEFGNKMAILAGDFLLAR 146 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQ-----LSLSKNLDVTEED----YLHVIKS 167 A + + +E LS V L EGE Q L SK+ D Y+ Sbjct: 147 ASVALARLRDPRVVELLSTVISNLVEGEFMQLRNSALGGSKSAYSAVHDRFQYYMEKTYM 206 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KTA L + + S+++ G + V ++ YG NLG+AFQLVDD++D+ + GK + Sbjct: 207 KTASLIAISCRSSAVLGGCTDDVIESAYLYGRNLGLAFQLVDDMMDFTVSSADFGKPVNI 266 Query: 228 DFRNGKPTLPVILAFQRGTKR----EKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283 D + G T PV+ A + + E+ F K D +++++ ++ E+ + T Sbjct: 267 DLKLGLATAPVLYAAAKFPELYPLIERKFEKK--GDAELALK-------LVHESNGVAQT 317 Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A +Y Q+A ++ P S + +L+++ + R Sbjct: 318 RDLARAYCQEAISAISAFPPSLAQTALIQLTQAVITR 354 >gi|156741272|ref|YP_001431401.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] gi|156232600|gb|ABU57383.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] Length = 338 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 81/264 (30%), Positives = 125/264 (47%), Gaps = 10/264 (3%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 F+ GK LRP L L + ++ + + LA AI+ +H +L+HDD+ D S RRG+ Sbjct: 48 FAPGKLLRPRLCLLSCRVVGGDPRDALPLAAAIQLLHDFSLIHDDIQDQSDTRRGRPTVW 107 Query: 99 LVWGNQTSVLVGDFLLSQA--------FCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 +WG + GD + + A V + L T+ EG+ LS Sbjct: 108 KLWGLAQGINTGDGMFTIAHLALHRLSLTGVPPATVLDVLRRFDETILTICEGQFLDLSY 167 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 NL + E YL +I+ KTA L +A+ E+ +L+ G QAL +G LG+AFQ+ DD Sbjct: 168 EGNLQIDESAYLAMIERKTAALIAASAELGALVGGADEETIQALFDFGRALGLAFQIEDD 227 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 VL G+ GK D K +LPVI A T ++ F KS + +++++ Sbjct: 228 VLGIWGDPAVTGKPFAADLHRRKISLPVIHALT--TSPDRAFLKSLYAQAALDNDSVRQV 285 Query: 271 FIIMRENRALVDTEYRAYSYGQKA 294 I+ + V E A +Y +A Sbjct: 286 LAILDAAGSRVYAETTAAAYHGEA 309 >gi|256027758|ref|ZP_05441592.1| dimethylallyltransferase [Fusobacterium sp. D11] gi|289765715|ref|ZP_06525093.1| dimethylallyltransferase [Fusobacterium sp. D11] gi|289717270|gb|EFD81282.1| dimethylallyltransferase [Fusobacterium sp. D11] Length = 297 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 23/237 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I ++Y I +GGKRLRP L +L + V A A+E IH+ +L+HDD+ + Sbjct: 30 ETIAKGMEYAILNGGKRLRPFLLFVILELLNENINKGVKSAIALEMIHSYSLVHDDLPAL 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------LVACT 139 D+ RRGK+ V+G +L+GD LL+ AF ++ SQ+ LE LS +++ T Sbjct: 90 DNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVL----SQKNLELLSSKQIVNIISKT 145 Query: 140 --------LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + S +K +D+ Y+H KT L +E++ +IA V+ Sbjct: 146 SEYAGINGMIGGQMIDIESENKKIDLETLKYIH--SHKTGKLIKLPIEIACIIANVEKDK 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ L+ Y +G+AFQ+ DD+LD G ++GK +G D K T P IL + K Sbjct: 204 KEVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKK 260 >gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum] Length = 303 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 143/276 (51%), Gaps = 20/276 (7%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 ++ L +K +D + + ++Y + +GGKR+RP+L +A L ++ L +E I Sbjct: 24 LDSLFVKEQRTDYGTLAESMRYSLLAGGKRIRPVLAMAAIEALGKDPIPYIPLLAPLELI 83 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----------- 121 HT +L+HDD+ +D+ +LRRGK +++G+ T++L GD LL+ AF ++ Sbjct: 84 HTYSLIHDDLPSMDNDSLRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDPDYDKLVSF 143 Query: 122 -IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 I K + L + V + ++ S K L+++ ++LH + KT L A+L + Sbjct: 144 EIRLKIIQELSVGAGVNGMVGGQQMDIASEGKALNLSSLEFLH--QHKTGALIRASLRIG 201 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ + + L YG +GIAFQ+ DD+LD G+ +GK +D K T P ++ Sbjct: 202 ALLGKASSPDFEHLDRYGQAVGIAFQIADDLLDVEGDAALLGKAAQKDQDRHKNTYPGLM 261 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 G ++ +N + +N+ ++ + + +RE Sbjct: 262 ----GVEKARNMARHKLNEALDAISSFGEKAKHLRE 293 >gi|332300739|ref|YP_004442660.1| Polyprenyl synthetase [Porphyromonas asaccharolytica DSM 20707] gi|332177802|gb|AEE13492.1| Polyprenyl synthetase [Porphyromonas asaccharolytica DSM 20707] Length = 334 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 98/277 (35%), Positives = 145/277 (52%), Gaps = 26/277 (9%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLAC---AIEFIHTATLLHDDVVDDSALRRGKVAA 97 G KR+RP+L L LM Y L A A+E H TLLHDDV+D+S +RRGK + Sbjct: 46 GAKRVRPVLAL---LMQAYLRPEAPLAASPIVALEVFHNFTLLHDDVMDNSPVRRGKPSV 102 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----SLVACTLAEGELRQLSLS-K 152 +G ++L GD +L A+ M+ E S E L L + +A + EG+ QL L + Sbjct: 103 YAKYGLTPAILSGDAMLILAYQMLTEGVSPEMLPDLIQNFNKMATLIMEGQ--QLDLEYE 160 Query: 153 NLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 LD V++E YL +I KTAVL + A ++++ + ++ ++G NLG+AFQL DD Sbjct: 161 QLDYVSKEQYLEMIGYKTAVLIATATRFGAILSKGSVTELESSYAFGWNLGLAFQLQDDY 220 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN------DGKIS-V 264 LD G+ GK +G D GK T+ LA+ ++ ++ T+ + KIS V Sbjct: 221 LDLYGDSETFGKPLGGDILEGKKTILHTLAYATASQAQRQALTETMRRSNEQAEEKISAV 280 Query: 265 ENLKKAFIIMRENRALVDTEYRAY-SYGQKAKDSLRC 300 + L I + +ALV R Y + QKA D+L Sbjct: 281 KTLYDEMDIATQVQALV----RDYLAEAQKALDALES 313 >gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805] gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805] Length = 315 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 127/233 (54%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + +GGKRLRP+L LA ++ + A A+E IHT +L+HDD+ + Sbjct: 51 ESLRESMRYSLLAGGKRLRPILCLAACELVGGDASLAMPTAVALEMIHTMSLIHDDLPAM 110 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-------IETKSQEALEALSLV-- 136 D+ LRRG+ V+G+ ++L GD LLS+AF MV + + + L+LV Sbjct: 111 DNDDLRRGRPTNHKVYGDAMAILAGDALLSRAFEMVSLRSPGVPPERLLKVVAELALVSG 170 Query: 137 ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L S + +D+ +Y+H+ KTA L A + +LI G + +A++ Sbjct: 171 APGLVGGQVVDLESEGREVDLETLEYIHL--HKTAALLRACVVTGALIGGADANQVEAMR 228 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +Y +G+AFQ+VDD+LD +GK G+D K T P +L + R Sbjct: 229 TYANGIGLAFQIVDDILDVTASSEVLGKTAGKDLIADKTTYPKLLGLEPSRAR 281 >gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii] gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii] Length = 326 Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 120/227 (52%), Gaps = 14/227 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + +GGKR+RP+LT+A A + + +AC++EFIHT +L+HDD+ +D+ R Sbjct: 66 MRYSLMAGGKRVRPILTIAAAEAIGATPPGLMAVACSLEFIHTYSLIHDDLPSMDNDDFR 125 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---------ETKSQEALEALSLVACTLA- 141 RGK V+G ++L GD LL+ AF ++ T+ L+ L+ + + Sbjct: 126 RGKPTNHKVYGEAMAILAGDALLTMAFDLISRPELMKGCEPTRQVRILQELAYGSGNMGM 185 Query: 142 -EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ + ++N D+ ++ K KT +L AA+ + ++ AG + + Y + Sbjct: 186 VGGQVFDIQ-AENQDIDLPTLQNIHKHKTGMLIRAAVRMGAMAAGATDRQLDDMTGYAED 244 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +G+AFQ+ DDVL+ G E+GKN D GK T P + K Sbjct: 245 IGLAFQIADDVLNVTGTREELGKNPNTDAERGKKTYPTFYGVEGARK 291 >gi|148654702|ref|YP_001274907.1| polyprenyl synthetase [Roseiflexus sp. RS-1] gi|148566812|gb|ABQ88957.1| Polyprenyl synthetase [Roseiflexus sp. RS-1] Length = 338 Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 90/295 (30%), Positives = 145/295 (49%), Gaps = 19/295 (6%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 F GK LRP L L + + + + LA AI+ IH +L+HDD+ D S RRG+ Sbjct: 48 FDPGKLLRPRLCLLSCRAVGGDPRDALPLAAAIQLIHDFSLIHDDIQDQSDTRRGRPTVW 107 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC---------TLAEGELRQLS 149 +WG + GD + + A + + + +L A +++ T+ EG+ LS Sbjct: 108 KLWGLAQGINTGDGMFTVAH-LSLHRLALTSLPAATILDVLRRFDETILTICEGQFLDLS 166 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 NL++ E YL +I+ KTA L +A+ E+ +L+ G QAL +G LG+AFQ+ D Sbjct: 167 YEGNLEIDEAAYLAMIERKTAALIAASAELGALVGGADEETIQALSDFGRALGLAFQIED 226 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFW-KSTINDGKISVEN 266 DVL G+ GK D K +LPVI A RE+ N + ++T++D + Sbjct: 227 DVLGIWGDPAVTGKPFAADLYRRKLSLPVIHALTTSPDRERLMNLYAQATLDD-----DA 281 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320 +++A I+ + V E A +Y +A +L R D++ + L + L R Sbjct: 282 VRQALAILDAAGSRVYAEATAAAYHGEAFAALDRARGDAAALEELRAIATSLLGR 336 >gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 312 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/240 (32%), Positives = 123/240 (51%), Gaps = 26/240 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + +GGKR+RP L LA ++ + + ACA+E IHT +L+HDD+ + Sbjct: 44 ERLSESMRYSLLAGGKRIRPALCLAACELVGGTMEVAMPTACALEMIHTMSLIHDDLPSM 103 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVA----CTL 140 D+ RRGK V+G + ++L GD LLS AF + ETK A + L ++ C Sbjct: 104 DNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETKGVSADKVLRVIVDVGKCVG 163 Query: 141 AEGELRQLSLSKNLDVTEED------------YLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +EG L + +D+ E Y+H KT L ++ +++ G Sbjct: 164 SEG----LVGGQVVDIMSEGADEGTVTIDTLKYIHA--HKTGALLEVSVTAGAILGGASE 217 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 L+ Y N+G+AFQ+VDD+LD E+GK G+D GK T P ++ + +KR Sbjct: 218 EQIGKLERYAQNIGLAFQVVDDILDCTATSEELGKTAGKDMAVGKSTYPSLVGMEE-SKR 276 >gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum] Length = 365 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 126/229 (55%), Gaps = 18/229 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--V 85 I + ++Y + +GGKR+RP+L +A+ ++ GD + + AC++E IHT +L+HDD+ + Sbjct: 102 IHEAMRYSLLAGGKRVRPILCMASCEVV--GGDESLAIPAACSVEMIHTMSLIHDDLPCM 159 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETKSQEALEALSLVACT-- 139 D+ LRRGK + +G T+VL GD LLS AF V + Q ++A+ + Sbjct: 160 DNDDLRRGKPTSHKAFGEDTAVLTGDALLSLAFEHVASKTKDVTPQRVVQAVGELGSAVG 219 Query: 140 ---LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ + S K + +TE +Y+H KT L AA+ ++I G + ++ Sbjct: 220 SKGLVAGQIVDIASEGKQVSLTELEYIH--NHKTGKLLEAAVVCGAIIGGGNEIEVERMR 277 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +Y LG+ FQ+VDD+LD E+GK G+D K T P ++ ++ Sbjct: 278 NYARCLGLLFQVVDDILDVTKSSEELGKTAGKDLVTDKATYPKLMGLEK 326 >gi|116629023|ref|YP_814195.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC 33323] gi|116094605|gb|ABJ59757.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC 33323] Length = 338 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 131/240 (54%), Gaps = 8/240 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP---MLTLATALMLEYRGDNHVL 66 KDM +++ +IL + S ++ ++ GK LRP ML A + + D Sbjct: 23 KDMIEISHIILTHVNSVPGLLGQALEDTFAVPGKMLRPACVMLFGAFGPDADQKHDELQK 82 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L+ A + + +++ Sbjct: 83 IATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLV--ALSLTLLSEN 140 Query: 127 QEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 ++L ++ T+ GE Q + + N+D++E++YL IK KT VLF A + + Sbjct: 141 AQSLHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFGLACFIGAYE 200 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G + + K +G LG AFQL DD+LDY + K + D ++G + P+I A Q Sbjct: 201 SGTKVTKALKTKKFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFALQ 260 >gi|83589030|ref|YP_429039.1| polyprenyl synthetase [Moorella thermoacetica ATCC 39073] gi|83571944|gb|ABC18496.1| Polyprenyl synthetase [Moorella thermoacetica ATCC 39073] Length = 320 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 107/201 (53%), Gaps = 4/201 (1%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GGK LRP L A Y +A AIE +H A+L+HDD++D +A+RR + A Sbjct: 29 LEGGKGLRPTLVFLCARFGIYDALEAGRVAAAIELVHLASLVHDDILDGAAVRRNRPALY 88 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +G +VL GD+L + AF ++ + K + L ++ ++ GE+ QL K Sbjct: 89 RAYGTVPAVLTGDYLFATAFGLLAKGK-KAVLYTVTEAIRSMCSGEIGQL---KGGLAGP 144 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 E Y I KTA L SAA +++ V+ + ++ L +G +LG+A+Q+VDD LD G Sbjct: 145 EAYFTYIGQKTAALISAACRCGAILGRVKRNQQECLAQFGWHLGLAYQIVDDCLDLFGSP 204 Query: 219 NEMGKNIGEDFRNGKPTLPVI 239 MGK +D G TLPV+ Sbjct: 205 ERMGKPCRQDLARGLLTLPVL 225 >gi|332877798|ref|ZP_08445537.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684263|gb|EGJ57121.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 327 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 113/217 (52%), Gaps = 8/217 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y++ GGKR+RP+L L + + + + A AIE H TLLHDD++D + +RRG Sbjct: 31 IRYVLSMGGKRIRPVLMLMAYNLYKEKVEVIGSQAMAIEIYHNYTLLHDDLMDRADMRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKSQEALEALSLVACTLAEGELRQ 147 W + ++L GD +L A+ C V + + L + A + EG+ Sbjct: 91 MATVHKKWDDNAAILSGDSMLVMAYRYMQQGCPVEQLGNVMGL--FTETALEIGEGQQYD 148 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + DV+EE+Y+ +I+ KT+VL + AL++ + + + L +G NLG+AFQL Sbjct: 149 IEFETRADVSEEEYIEMIRLKTSVLLACALKIGAWLGDAPRQDAELLYRFGENLGLAFQL 208 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 DD LD G+ GK IG D K T +I A R Sbjct: 209 QDDYLDVYGDPAVFGKKIGGDILCNKKTYMLINALGR 245 >gi|85373942|ref|YP_458004.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594] gi|84787025|gb|ABC63207.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594] Length = 305 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 130/249 (52%), Gaps = 25/249 (10%) Query: 20 LKRICSDVEMIPDV---------------VKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 L RI D++ + DV ++Y GGKR+RP+L +ATA ML D Sbjct: 18 LNRIARDIDAVFDVLLPVPDDTRAPLVEAMRYSAMDGGKRVRPLLVVATAEMLGVSRDPA 77 Query: 65 VLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + + CA+E IH +L+HDD+ +DD LRRGK + T+VL GD L + AF ++ Sbjct: 78 LRVGCAVEAIHVYSLIHDDLPCMDDDELRRGKATLHKAYDEATAVLAGDSLHALAFEILT 137 Query: 123 ETKS-QEALEALSLVACTLAEGELRQLSLSKNLDVTEE--DY-LHVIKS----KTAVLFS 174 + ++ + LV A + ++ + +D+ E DY LH I KT L + Sbjct: 138 DDETTPDPFTQAELVRTLAAASGMAGMAGGQMMDMAAESADYDLHTITRLQQLKTGALLA 197 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A++E+ +++A + R L++Y ++G+AFQ+ DD+LD G+ + GK + +D GK Sbjct: 198 ASVEMGAILAKIPREGRSHLRAYARDIGLAFQIADDLLDAEGDEEKAGKALRKDDEQGKQ 257 Query: 235 TLPVILAFQ 243 T ++ + Sbjct: 258 TFVTLMGVE 266 >gi|241957890|ref|XP_002421664.1| hexaprenyl pyrophosphate synthetase, putative [Candida dubliniensis CD36] gi|223645009|emb|CAX39602.1| hexaprenyl pyrophosphate synthetase, putative [Candida dubliniensis CD36] Length = 498 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 85/304 (27%), Positives = 138/304 (45%), Gaps = 53/304 (17%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + + N+ +VL GDFLL +A + ++ Sbjct: 200 LAEIVEMIHTASLLHDDVIDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIARLRN 259 Query: 127 QEALEALSLVACTLAEGELRQL--------------------SLSK-------------- 152 E +E LS L EGE QL S+ + Sbjct: 260 PEVIELLSTTIANLVEGEFMQLKNTVLQNNNNDEIFNDGDVKSIPQPTGKVPTKLHQYSV 319 Query: 153 --------------NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 N++ E YLH KTA L S + +++++G Q+ + + +G Sbjct: 320 QQKNGGDAVVDHNINVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGSQDDIIENCYQFG 379 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 NLG+ FQ+VDD+LDY +GK D + G T P++ A+++ K + + Sbjct: 380 RNLGLCFQIVDDMLDYTSSDKTIGKPSQADLKLGLATAPILFAWKQEPKLGELIARKFNQ 439 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 G + + A + + + T+ A Y +A +LR LP+S + +L + + L Sbjct: 440 PGDVEI-----ARRAVEKYNGVAQTKEMATMYCHQALKNLRVLPESEARSALELLTNSVL 494 Query: 319 QRLN 322 R N Sbjct: 495 TRTN 498 >gi|297621395|ref|YP_003709532.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044] gi|297376696|gb|ADI38526.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044] Length = 294 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 13/237 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + +Y + GGKR+RP+LTLATA + + ++ ACAIE IHT +++HDD+ Sbjct: 35 EAARYALLGGGKRIRPILTLATAKLFNADIEAALVPACAIEMIHTYSVIHDDLPCMDDDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACT-----LA 141 RRGK + + +VL GDFLL++AF ++ E + + ++ + +AC + Sbjct: 95 FRRGKPSLHKQFNEALAVLTGDFLLTRAFEVISEDRQLNVEMQIDLIRTIACASGGKGMI 154 Query: 142 EGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ +S K LD+ + +LH KT L +AA+E ++A + RQ + + Sbjct: 155 GGQVIDISSEGKGLDLKQLQHLHA--KKTGALITAAVECGCIVASASDEERQPALQFAQD 212 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+VDD+LD V + G I D N K T +L + K + + I Sbjct: 213 IGLAFQIVDDLLDITSGVKKRGAEISSDRENNKSTYVALLGIEEARKSADQLFNNAI 269 >gi|238898686|ref|YP_002924367.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466445|gb|ACQ68219.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 312 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 83/241 (34%), Positives = 130/241 (53%), Gaps = 16/241 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 DV++Y GGKRLRP L AT ML N A AIE IH+ +LLHDD+ +D+ Sbjct: 47 DVMRYSTLMGGKRLRPYLVYATGQMLGLSLSNLDAPAAAIECIHSYSLLHDDLPSMDNDD 106 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALS-LVACTLAEG 143 LRRG++ + +G ++L GD L S AF ++ + + +++ L LS L + A G Sbjct: 107 LRRGELTGHVKFGEANAILAGDSLQSLAFSILADDRMPDVVTEDRLAMLSELARASGATG 166 Query: 144 ELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 +L S+ LD++ E + KT L AA+ + +L AG + R+AL Y Sbjct: 167 MCGGQALDMASEYLDISLETLELIHHHKTGALLRAAVRLGALAAG--ETGRKALPWLDQY 224 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD GE + GK D + GK T P +L+ + K+ ++S++ Sbjct: 225 AKSIGLAFQVQDDILDEIGEARKTGKKPKSDQQRGKATYPGLLSLKGAQKKMAALYQSSL 284 Query: 258 N 258 + Sbjct: 285 S 285 >gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata] Length = 366 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 133/252 (52%), Gaps = 19/252 (7%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I D +I + ++Y + +GGKR+RPML LA ++ N + ACA+E IHT +L+HD Sbjct: 95 IVKDPPVIYEAMRYSLLAGGKRVRPMLCLAACELVGGDQSNAMPAACAVEMIHTMSLIHD 154 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLV 136 D+ +D+ +RRGK V+G +VL GD LL+ AF + + L A+ + Sbjct: 155 DLPCMDNDDIRRGKPTNHKVYGEDVAVLAGDSLLAFAFEFIATATAGVSPSRILAAIGEL 214 Query: 137 ACT-----LAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 A + L G++ ++ + N +V + +++H+ KTA L A++ + +++ G + Sbjct: 215 AKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHI--HKTAALLEASVVLGAILGGGTDE 272 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L+ + +G+ FQ+VDD+LD E+GK G+D K T P +L G ++ Sbjct: 273 EVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLL----GLEKA 328 Query: 250 KNFWKSTINDGK 261 K F D K Sbjct: 329 KEFAAELNRDAK 340 >gi|147920348|ref|YP_685879.1| putative polyprenyl synthetase [uncultured methanogenic archaeon RC-I] gi|110621275|emb|CAJ36553.1| putative polyprenyl synthetase [uncultured methanogenic archaeon RC-I] Length = 340 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 81/286 (28%), Positives = 135/286 (47%), Gaps = 8/286 (2%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK+LR + L + + DN + A A+E +H +L+HDD+ D RR + + Sbjct: 55 GGKQLRSTMCLLACEAISGKFDNALPGAAAVELVHNFSLIHDDIEDGDETRRHRPTVWKL 114 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVACTLAEGELRQLSLSKNLD 155 WG ++ GD + ++ ++E K + + L + L EG+ + Sbjct: 115 WGVPQAINTGDAMDVVSYIAILELKVKPETMIKVLRVFNDTIMQLCEGQYLDMDFQTRKT 174 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 VT E+Y+ +I KTA L A+ + ++ A V K++G +GI FQ+ DD+L Sbjct: 175 VTVEEYIEMITGKTAALIEASTAIGAMAATDDQKVIDHFKAFGHKIGIGFQIQDDLLGIW 234 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 G+ ++ GK+ D RN K TLPV+ A Q ++E+ K + S ++ + F I+ Sbjct: 235 GDPSKTGKSARNDIRNKKKTLPVLYALQYSKQKEE--LKQLYAKEQFSEADIDRVFQILT 292 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320 E A T A+ Y +A L L P S L+ + F + R Sbjct: 293 EAGAYEYTMKTAHRYRDEALAELEGLCPGSRAMDDLIAIGRFLVDR 338 >gi|261331244|emb|CBH14234.1| farnesyl pyrophosphate synthetase, putative [Trypanosoma brucei gambiense DAL972] Length = 359 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 93/310 (30%), Positives = 146/310 (47%), Gaps = 35/310 (11%) Query: 35 KYLIFSGGKRLRPMLT--LATALMLEYRGDNH-------------------VLLACAIEF 73 KY++ SGGK LRP L +A AL+ + + L E Sbjct: 59 KYVLSSGGKLLRPTLVAMMAHALVPPHMSQQFQASDIGSLDDIPSGTIRPFLRLGEVTEL 118 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IHTA L+HDDV+DDS +RRGK A V + +VL GDFLL++A + + + Sbjct: 119 IHTAALVHDDVIDDSEMRRGKPALHCVHDVKRAVLAGDFLLARASLWIASLCVPRIVVLM 178 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ- 192 + L GE+ Q+ +L+ EE KT L + +L ++++A NS + Sbjct: 179 TTALEDLTRGEMMQMEGCFDLERYEEKTY----CKTGSLIANSLAATAVLADPSNSAHEV 234 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 A YG LGIAFQ+VDD LD G+ +GK D + G TLP +LA ++ +K + Sbjct: 235 AAGEYGRRLGIAFQIVDDCLDITGDEKNLGKRTMVDMKAGIATLPTLLAARQDSKVDAAV 294 Query: 253 WK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + D +I VE +++ +M + A + ++ +LR L +S ++ L Sbjct: 295 RRRFKEPGDAEICVEAIERHGCVM-------EALQHADQHCRRGIAALRTLHESPARERL 347 Query: 311 MEVVDFCLQR 320 ++ L R Sbjct: 348 EAAMNLLLTR 357 >gi|147919413|ref|YP_685765.1| putative farnesyltranstransferase [uncultured methanogenic archaeon RC-I] gi|116077932|emb|CAJ36439.2| putative farnesyltranstransferase [uncultured methanogenic archaeon RC-I] Length = 314 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/259 (30%), Positives = 141/259 (54%), Gaps = 22/259 (8%) Query: 30 IPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDVV 85 + +VV+Y + GK++R +LT+A E G N ++ A +E IH +L+ DDV+ Sbjct: 35 LAEVVRYALCQKGKKIRASLLTIAC----EAVGGNIAQAMVPAAVVEMIHNTSLVLDDVI 90 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-SLVAC------ 138 D++ RRG+ WGN +++ D LL+ + I S+ ++ +++ C Sbjct: 91 DNAETRRGRSTINHRWGNNMALIACDALLA----LTIRQASKSSVNMTNAIIECAANSML 146 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 +LAEGE +L D T +DY + + KTA LFSA+ E+ +L+ G + ++L+ YG Sbjct: 147 SLAEGEALELV---GKDYTLKDYYKIAERKTASLFSASAEIGALVGGGTSKEVKSLREYG 203 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 ++GIAFQ+ DD+LD + +GK D + +PT+ ++LA + G REK S + Sbjct: 204 TSIGIAFQIRDDILDVTSSNDSLGKPTLIDLKMDRPTVIMLLAHEEGLTREKMLAMSRED 263 Query: 259 DGKISVENLKKAFIIMREN 277 ++ ++ +A ++ RE Sbjct: 264 LQEVLKPSVARAEMLAREQ 282 >gi|311111182|ref|ZP_07712579.1| polyprenyl synthetase superfamily [Lactobacillus gasseri MV-22] gi|311066336|gb|EFQ46676.1| polyprenyl synthetase superfamily [Lactobacillus gasseri MV-22] Length = 341 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/243 (31%), Positives = 135/243 (55%), Gaps = 11/243 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP---MLTLATALMLEYRGDNHVL 66 KDM +++ +IL + S ++ ++ GK LRP ML A + + D Sbjct: 23 KDMIEISHIILTHVNSVPGLLGQALEDTFAVPGKMLRPACVMLFGAFGPDADQKHDELQK 82 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L+ A + + +++ Sbjct: 83 IATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLV--ALSLTLLSEN 140 Query: 127 QEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 ++L ++ T+ GE Q + + N+D++E++YL IK KT VLF A + + Sbjct: 141 AQSLHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFGLACFIGAYE 200 Query: 184 AGVQ-NSVRQALKS--YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +G + V +ALK+ +G LG AFQL DD+LDY + K + D ++G + P+I Sbjct: 201 SGTKVTKVTKALKAKKFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIF 260 Query: 241 AFQ 243 A Q Sbjct: 261 ALQ 263 >gi|71744686|ref|XP_826973.1| farnesyl pyrophosphate synthetase [Trypanosoma brucei TREU927] gi|70831138|gb|EAN76643.1| farnesyl pyrophosphate synthetase, putative [Trypanosoma brucei] Length = 359 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 93/310 (30%), Positives = 146/310 (47%), Gaps = 35/310 (11%) Query: 35 KYLIFSGGKRLRPMLT--LATALMLEYRGDNH-------------------VLLACAIEF 73 KY++ SGGK LRP L +A AL+ + + L E Sbjct: 59 KYVLSSGGKLLRPTLVAMMAHALVPPHMSQQFQASDIGSLDDIPSGTIRPFLRLGEVTEL 118 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IHTA L+HDDV+DDS +RRGK A V + +VL GDFLL++A + + + Sbjct: 119 IHTAALVHDDVIDDSEMRRGKPALHCVHDVKRAVLAGDFLLARASLWIASLCVPRIVVLM 178 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ- 192 + L GE+ Q+ +L+ EE KT L + +L ++++A NS + Sbjct: 179 TTALEDLTRGEMMQMEGCFDLERYEEKTY----CKTGSLIANSLAATAVLADPSNSAHEV 234 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 A YG LGIAFQ+VDD LD G+ +GK D + G TLP +LA ++ +K + Sbjct: 235 AAGEYGRRLGIAFQIVDDCLDITGDEKNLGKRTMVDMKAGIATLPTLLAARQDSKVDAAV 294 Query: 253 WK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + D +I VE +++ +M + A + ++ +LR L +S ++ L Sbjct: 295 RRRFKEPGDAEICVEAIERHGCVM-------EALQHADQHCRRGIAALRTLHESPARERL 347 Query: 311 MEVVDFCLQR 320 ++ L R Sbjct: 348 EAAMNLLLTR 357 >gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum] Length = 297 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 137/254 (53%), Gaps = 17/254 (6%) Query: 6 DLTLKDMEK-VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 D+ K ++K + L + + + + + ++Y + +GGKR+RP+L LA + G++ Sbjct: 8 DMQKKRVDKALEALFERELSREYGRLAEGIRYSLLAGGKRIRPVLALAAIEAVGGDGESL 67 Query: 65 VLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + L +E +HT +L+HDD+ +D+ LRRG+ +V+G ++L GD LL+ AF ++ Sbjct: 68 LPLTLPLELVHTYSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDALLTHAFTLLS 127 Query: 123 E---------TKSQEALEALSLVA--CTLAEGE-LRQLSLSKNLDVTEEDYLHVIKSKTA 170 + ++ E + LS + C + G+ L +S KNL + E + LH + KT Sbjct: 128 DPVYDKVLPASRRMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELENLH--RHKTG 185 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L A++ + ++AG + +AL YG +GIAFQ+ DD+LD G E+GK +D Sbjct: 186 ALLRASVRIGGILAGASSEWVEALTRYGEAVGIAFQIADDLLDVLGTAEELGKAAQKDAG 245 Query: 231 NGKPTLPVILAFQR 244 K T P ++ R Sbjct: 246 KSKNTYPGLVGIDR 259 >gi|169350498|ref|ZP_02867436.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552] gi|169292818|gb|EDS74951.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552] Length = 282 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 123/232 (53%), Gaps = 16/232 (6%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C + D +KY + +GGKR+RP+L L +++ ACAIE IHT +L+HDD Sbjct: 18 CFQDSKVKDAMKYSLLAGGKRIRPLLMLRIIQSYGLNYHDYLDAACAIEMIHTYSLIHDD 77 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ LRRGK + T++L GD LL++A ++++ L+ ++L++ Sbjct: 78 LPGMDNDDLRRGKPTCHRQFDEATAILAGDGLLNEAANVILKANYNSELK-IALLSILYQ 136 Query: 142 EGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + + L + LD+ E D +H KT L SA++++ +L+A V + + Sbjct: 137 ASGVNGMILGQALDIKFENKKANRKELDLIH--HHKTGDLISASMQMGALVANVND--LE 192 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 K G +G+AFQ+ DD+LD G +GKN+G D N K T ++ ++ Sbjct: 193 TFKEIGYKIGLAFQIQDDILDVVGNSELLGKNVGSDIENNKSTYVTLMGVEK 244 >gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120] gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120] Length = 309 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 124/245 (50%), Gaps = 14/245 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L LAT+ M+ + + ACA+E IHT +L+HDD+ + Sbjct: 43 EKIYESMRYSLLAGGKRLRPILCLATSEMMGGTIEIAMPTACAVEMIHTMSLIHDDLPAM 102 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----------ALS 134 D+ RRG + V+G ++L GD LL+ AF V ++ E++ + Sbjct: 103 DNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAFEFV-AIRTPESVPRDRVLQVVARLGRA 161 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L A L G++ L D + E + KTA L A + ++AG + Q L Sbjct: 162 LGAAGLVGGQVVDLDSEGKSDTSLETLNFIHNHKTAALLEACVVCGGILAGASSENVQRL 221 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 Y N+G+AFQ++DD+LD ++GK G+D K T P + ++ + + + Sbjct: 222 SRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKDLLAKKVTYPSLWGIEQSRVKAQQLIE 281 Query: 255 STIND 259 + + Sbjct: 282 AACTE 286 >gi|260942339|ref|XP_002615468.1| hypothetical protein CLUG_04350 [Clavispora lusitaniae ATCC 42720] gi|238850758|gb|EEQ40222.1| hypothetical protein CLUG_04350 [Clavispora lusitaniae ATCC 42720] Length = 535 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/304 (28%), Positives = 132/304 (43%), Gaps = 53/304 (17%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + + N+ +VL GDFLL +A + ++ Sbjct: 237 LAEIVEMIHTASLLHDDVIDLSDARRGRPSGNIAFTNKMAVLAGDFLLGRASVAISRLRN 296 Query: 127 QEALEALSLVACTLAEGELRQL-------------------------------------- 148 E +E +S L EGE QL Sbjct: 297 PEVVELISTSIANLVEGEFMQLKNTVLTDDKTVNNDGDEKVVPTPTGKVPVEQHEYSVAS 356 Query: 149 ----------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 S N+D E YLH KTA L S + +++++G +++V + +G Sbjct: 357 PGQSGENGQVSHDTNVDAAFEYYLHKTYLKTASLMSKSARSAAVLSGARDNVVDSCYDFG 416 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 NLG+ FQ+VDD+LDY GK D + G T PV+ A+++ K + Sbjct: 417 RNLGLCFQIVDDMLDYTSSDAAFGKPSQADLKLGLATAPVLFAWRKEPKLGALIARKFSE 476 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 G + + A + + T A Y +A SLR LP+S + +L + L Sbjct: 477 PGDVEI-----ARRAVERYDGVAQTRKMAQDYCNRALTSLRVLPESDARSALELLTHSVL 531 Query: 319 QRLN 322 R N Sbjct: 532 TRTN 535 >gi|320582142|gb|EFW96360.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS) [Pichia angusta DL-1] Length = 469 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 48/297 (16%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RRG+ + + + N+ ++L GDFLL +A + ++ Sbjct: 176 LAEITEMIHTASLLHDDVIDFSDSRRGRDSGNVAFSNKMAILAGDFLLGRASVSLGRLRN 235 Query: 127 QEALEALSLVACTLAEGELRQL-------------------------------------- 148 E +E +S L EGE QL Sbjct: 236 SEVVELMSTAIANLVEGEFMQLKNTVMQPNIGQIEDGGVVKQIPEPTGKVPVEVHEYSVK 295 Query: 149 -----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 S +N++ + YLH KTA L S + ++++AG V + +G NLG+ Sbjct: 296 TPETISHEENVEAAFQYYLHKTYLKTASLMSKSSRSAAILAGCNEDVIENCYQFGRNLGL 355 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 FQ+VDD+LDY +GK G D + G T PV+ A+ +EK I Sbjct: 356 CFQIVDDMLDYTTTAEMLGKPAGADLQLGLATAPVLYAW-----KEKPELGPMIGRKFSK 410 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E+++ A + + + + T A +Y A +LR LPDS + +L + + L R Sbjct: 411 PEDIEIARKAVEDAKGVEKTRELAETYCTGALRNLRTLPDSDARNALEMLTNSVLTR 467 >gi|307105639|gb|EFN53887.1| hypothetical protein CHLNCDRAFT_58364 [Chlorella variabilis] Length = 634 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/256 (31%), Positives = 130/256 (50%), Gaps = 23/256 (8%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALMLEYRGDNHVL 66 ++E V + + I +++ + +Y +G GKRLR +L +A+AL G +H+ Sbjct: 116 EIECVTERLRRDIFTEIPALERAAEYFFRAGAEGKRLRSTMLLLMASALAPAPAGLDHLT 175 Query: 67 -------------------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107 +A E IH A+LLHDDV+D + RRGK + ++GN+ ++ Sbjct: 176 VDTSPPAEHPPTVRRRQQRIAEITELIHVASLLHDDVIDAAGTRRGKKSLNALFGNKVAI 235 Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 L GDFLL++A + ++ EA+ +S L GE+ QL+ + + Y+ Sbjct: 236 LAGDFLLARASVSLAALRNPEAILLMSQSLEHLVAGEILQLTADVEEAASMDHYMRKTYC 295 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KTA L + + +++ G A YG ++G+AFQLVDDV+DY +EMGK Sbjct: 296 KTASLMANSCRAVAVLGGHGAGDCGAAAEYGRHVGLAFQLVDDVMDYTCSASEMGKPALN 355 Query: 228 DFRNGKPTLPVILAFQ 243 D R+G T PV+ A + Sbjct: 356 DLRSGLATAPVLYAAE 371 >gi|332977569|gb|EGK14339.1| geranyltranstransferase [Desmospora sp. 8437] Length = 298 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 127/242 (52%), Gaps = 14/242 (5%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 ++R E + + + Y + +GGKRLRP+LTLATA L + + ACA+E IHT +L Sbjct: 23 MERPAGIPETLREAMAYSLLAGGKRLRPVLTLATAEALGGDEEKALPFACAVEMIHTYSL 82 Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE---ALS 134 +HDD+ RRG ++G ++L GD LL++AF ++ E L AL+ Sbjct: 83 IHDDLPAMDDDDFRRGNPTNHKIYGEAMAILAGDALLTRAFDVMAEGALDAELPRKTALT 142 Query: 135 LV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ A + G+++ + + +V+ E+ + +SKT L + ++ + +++ G Sbjct: 143 LIRECAVRAGAEGMVGGQVKDIQ-GEGREVSLEELQDIHRSKTGDLITGSVRIGAMVGGS 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 QAL Y LG+AFQ+ DDVLD G+ ++GK +G D K T P +L Sbjct: 202 GEDELQALTGYAERLGLAFQIQDDVLDVVGDHQKLGKPVGSDEVKNKSTYPSLLGLDSSR 261 Query: 247 KR 248 +R Sbjct: 262 ER 263 >gi|326405759|gb|ADZ62830.1| polyprenyl transferase [Lactococcus lactis subsp. lactis CV56] Length = 326 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 85/313 (27%), Positives = 161/313 (51%), Gaps = 7/313 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLA 68 ++ V L+++R+ + + I ++ GGK +RP L L A ++ + + +A Sbjct: 15 LKDVQALMIERLKINNQEIEAALEKFASRGGKMVRPALFLLFAGIVPNGSKDEEKLIKIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 ++E +H+ATL+HDD++DDS LRRG + +G +V GDF+ + F ++IET + Sbjct: 75 ASLEMLHSATLIHDDIIDDSPLRRGLPSIESQFGKDVAVYAGDFVYTVYFELLIETMNGT 134 Query: 129 ALEALSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + A + + + +GEL Q+ + + + T Y+ I KTA L S + AG Sbjct: 135 SFVAKNAQSMKKILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYFAGGD 194 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ + + G +G+AFQ+ DD+L++ ++E K I DFR G TLP++LA + + Sbjct: 195 KKLQHSARKIGRAIGLAFQVYDDILNFTVGLDEADKPILTDFRQGIYTLPLLLAREVNDE 254 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + ++ N + +L + ++ E+ + A + A + +R LP+S+ + Sbjct: 255 AIAPYLEAPENLSRQECLDLAE---LVTESGGIAGALLVAGRLTELALNEIRKLPESTNR 311 Query: 308 KSLMEVVDFCLQR 320 + L E L+R Sbjct: 312 QILEEATQILLER 324 >gi|282165107|ref|YP_003357492.1| polyprenyl synthetase [Methanocella paludicola SANAE] gi|282157421|dbj|BAI62509.1| polyprenyl synthetase [Methanocella paludicola SANAE] Length = 313 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 13/227 (5%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---DNHVLLACAIEFIHTATLLHDDVV 85 ++ +VV+Y + GKR+R T L E G + + A A+E +H +L+ DD++ Sbjct: 34 LLSEVVRYALSLKGKRIR---TTVLTLSCEAAGGDMERAMAPAMAVEMLHNTSLVLDDII 90 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---SQEALEALSLVACTLAE 142 D S +RRGK WGN+ +++ D +LS A + + +++ ++ ++ LAE Sbjct: 91 DKSDIRRGKATINNRWGNEMALIACDVMLSLAIREITRSDLGLTKQMIDCVADSMLRLAE 150 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE +L K T +DY + KTA LFSA+ E +L+ +AL+ YG +LG Sbjct: 151 GEALELEKKK---FTIDDYYKIADKKTASLFSASAESGALVGNADQKYVKALQQYGRSLG 207 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AFQ DD+LD+ G ++GK D + +PTL +ILA G RE Sbjct: 208 LAFQARDDILDFTG-TEQIGKTAFLDLKMNRPTLVMILAADDGFSRE 253 >gi|170017917|ref|YP_001728836.1| geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20] gi|169804774|gb|ACA83392.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20] Length = 332 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 142/292 (48%), Gaps = 17/292 (5%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNH-----VLLACAIEFIHTATLLHDDVVDDSALRRG 93 + GK +RP LTL + DN + L ++E +H ATL+HDD++D+S LRRG Sbjct: 46 LNAGKLIRPALTL----LFSRLSDNPYNAKAISLGASLELLHLATLIHDDIIDESKLRRG 101 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-LAEGELRQLSLSK 152 + + +G T+V GD+LL+ F + +E + A L+L A + GEL Q Sbjct: 102 HESIQSQFGKDTAVYAGDYLLTGMFSL-LERADKPAANKLALKALQEILFGELVQKQNRY 160 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDD 210 NL YL IK KTA LF ++ +I+G S + + + G N+G+ FQL+DD Sbjct: 161 NLSADFNSYLTQIKGKTAALFRLSVSF-GVISGDNYSEPLLETVSHLGENIGVTFQLLDD 219 Query: 211 VLDYRGEVNE--MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 LD+ + +GK +G+D RNG T P++ A +K D +E + Sbjct: 220 YLDFESITQDLSLGKPVGQDIRNGIYTAPILFALADPVISDKIIPLLAKRDDISDIE-MM 278 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ E+ A+V +Y + K ++ LPD + L ++ L R Sbjct: 279 TLHTLITESNAMVKLSDLLTNYTESLKQMIQSLPDEGIRLQLEQLSGILLNR 330 >gi|307128579|ref|YP_003880609.1| polyprenyl synthetase [Candidatus Sulcia muelleri CARI] gi|306483041|gb|ADM89911.1| polyprenyl synthetase [Candidatus Sulcia muelleri CARI] Length = 326 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 118/226 (52%), Gaps = 1/226 (0%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S + + ++ YLI GK +RP+ ML LA +E +HTA+L+HDDV Sbjct: 30 SKIPIFKEINNYLIKIKGKYIRPIFIFLITKMLGNICKKTYDLAYLVELMHTASLIHDDV 89 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D S RRG ++ +W N+T+V+ GD++ S++ + I+ ++ L +S ++EGE Sbjct: 90 IDFSTTRRGVLSINAIWQNKTAVIFGDYIFSKSLNIAIKNNYKDYLNIISKTIEKMSEGE 149 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + Q+ +++ + Y +I KTA++ A E + + + +K +G G+A Sbjct: 150 IFQIEYFHKMNINKYIYEKIIFKKTAIMIGACCEGGARSINKKKKIILEIKKFGELAGMA 209 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 FQ+ DD+LDY V + N + K TLP I ++ +K+ K Sbjct: 210 FQIKDDLLDYEN-VQNLNINYYLILKEIKITLPFIYTLKKSSKKNK 254 >gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] Length = 293 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/270 (30%), Positives = 137/270 (50%), Gaps = 31/270 (11%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 +KD+++ L+R+ + P V+Y +F+GGKRLRP+LTLA A + + Sbjct: 8 AIKDVDEA----LERLIPAEDTFPQEIHRAVRYSVFAGGKRLRPLLTLAAAEIFGVPRLH 63 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + ACAIE +HT +L+HDD+ RRG+++ V+G+ ++L GD LL+ AF Sbjct: 64 ALPAACAIEMVHTYSLIHDDLPALDDDDYRRGRLSNHKVFGDAMAILAGDSLLTLAF--- 120 Query: 122 IETKSQEA---LEALSLVACTLAEGELRQ------------LSLSKNLDVTEEDYLHVIK 166 ET + EA ++V T A G+ LS K ++ DY+H + Sbjct: 121 -ETLAAEATAYFAPATVVRLTEALGKAAGMSGMIGGQVVDLLSEGKQVNAATLDYIH--R 177 Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KT LF+ ++ +++ G Q L + N+G+AFQ+VDD+LD G+ +GK G Sbjct: 178 HKTGALFTCCIKSGAIMGGASLEEMQRLTVFAQNIGLAFQIVDDILDITGDEAALGKKTG 237 Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKST 256 D K T P + ++ ++ ++ + Sbjct: 238 ADQNRQKATYPALYGLKQAEEKARDLLSAA 267 >gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205] Length = 312 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 126/236 (53%), Gaps = 20/236 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDV 84 E + + ++Y + +GGKRLRP+L LA E G + L A A+E IHT +L+HDD+ Sbjct: 46 ESLREAMRYSLLAGGKRLRPILCLAAC---ELAGGDAALAMPTAVALEMIHTMSLIHDDL 102 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLV----- 136 +D+ LRRG V+G ++L GD LL++AF MV + + A + + +V Sbjct: 103 PAMDNDDLRRGMPTNHKVYGEANAILAGDALLTRAFEMVALRSPGVPAEQLIKVVGELSL 162 Query: 137 ---ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 A L G++ L K++D+ +Y+H+ KT L + + +LIAG ++ Sbjct: 163 ASGAPGLVGGQVVDLECEGKDVDLETLEYIHL--HKTGALLRSCVLTGALIAGASEALLA 220 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 AL +Y +G+AFQ++DD+LD +GK G+D K T P +L + +R Sbjct: 221 ALTTYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTYPKLLGLEESRQR 276 >gi|301091604|ref|XP_002895983.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262095707|gb|EEY53759.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 436 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 133/258 (51%), Gaps = 28/258 (10%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLI-FSGGKRLRPMLTL-----------ATA 54 L +DM VN I + + SD ++ V +Y GGK++RP + L AT Sbjct: 108 LVEQDMVSVNHSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMVLLVSRAAEAHRRATD 167 Query: 55 LML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108 L EY LA E IHTA+L+HDDV+D++ RRG+ + V+G + +VL Sbjct: 168 TPLPETQSEEYMHAAQQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKVFGGKMAVL 227 Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE-----EDYLH 163 GDFLL+++ ++ ++ EA+E +S L +GE+ Q+ KN D + E YL Sbjct: 228 AGDFLLARSSVLLARLRNLEAVELMSTSIEHLVKGEVMQM---KNADARDDISPFEYYLR 284 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 KT L S + + + + + ++G ++G+AFQL+DDVLDY G E GK Sbjct: 285 KNYYKTGSLMSNSCKAALALGKHDQHICDLGFAFGRHIGLAFQLIDDVLDYEG--VETGK 342 Query: 224 NIGEDFRNGKPTLPVILA 241 D ++G T P++LA Sbjct: 343 PFLADLKSGLSTAPLLLA 360 >gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21] gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21] Length = 295 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 25/239 (10%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y +F+GGKR+RP+L LA + + ACA+E IHT +L+HDD+ +D+ R Sbjct: 36 MRYSVFAGGKRVRPVLLLAACEAVGGALKPALPAACAMEMIHTYSLIHDDLPAMDNDDFR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG V+G T++L GD LL++AF ++ + + E ++ + + E+ S S Sbjct: 96 RGNPTNHKVYGEATAILAGDALLTEAFILL--SGNGEGVDPAARLRVIH---EIAHASGS 150 Query: 152 K----------------NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + ++D+ Y+H KT L A++ +++ G AL Sbjct: 151 RGMVGGQMVDMESEGKHDIDMATLSYIHT--HKTGALIRASVRAGAILGGADEEAFDALT 208 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 Y +G+AFQ+ DDVLD G E+GK+ G D GK T P ++ + +R + + Sbjct: 209 RYADAIGLAFQIADDVLDVEGTTEELGKDAGSDQARGKATYPALVGLEASKRRAEELVQ 267 >gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana CCMP1335] gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana CCMP1335] Length = 339 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 84/264 (31%), Positives = 132/264 (50%), Gaps = 28/264 (10%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L +A M D + A A+E IHT +L+HDD+ +D+ LRRG Sbjct: 82 YSLMAGGKRIRPVLCIAACEMFGGSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRRG 141 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVAC--------TLAEGE 144 K +V+G ++L GD LLS +F V ETK A + + ++A LA G+ Sbjct: 142 KPTNHVVFGEDVAILAGDSLLSTSFEHVARETKGVSAEKIVDVIARLGKSVGAEGLAGGQ 201 Query: 145 LRQLSLSKNLDVTEED--YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + L T +D ++H+ KTA L A+ +++ G A + + MN+G Sbjct: 202 VMDLECEAKPGTTLDDLKWIHI--HKTATLLQVAVASGAVLGGATPEEVAACELFAMNIG 259 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQ+ DD+LD ++GK G+D K T P +L G + K + + I++ K Sbjct: 260 LAFQVADDILDVTASSEDLGKTAGKDEATDKTTYPKLL----GLEESKAYARQLIDEAKE 315 Query: 263 SVENLK---------KAFIIMREN 277 S+ FII R+N Sbjct: 316 SLAPFGDRAAPLLAIADFIIDRKN 339 >gi|284162554|ref|YP_003401177.1| polyprenyl synthetase [Archaeoglobus profundus DSM 5631] gi|284012551|gb|ADB58504.1| Polyprenyl synthetase [Archaeoglobus profundus DSM 5631] Length = 293 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 131/235 (55%), Gaps = 12/235 (5%) Query: 20 LKRICSDVEMIPDV---VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 L+R+ + V IP V +K++I +GGKR RP++ L +A + + + +A A+E IHT Sbjct: 15 LERLVNSVNTIPKVKKALKHVISAGGKRTRPLIVLLSAKLCGGDYKDVMDMALAVELIHT 74 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+L+HDD++D +RR A + + ++LVGD+L+S++ +V + SQ ++ + Sbjct: 75 ASLVHDDIIDRGVMRRNVKALHVEYDISLAILVGDWLISKSVELVSKYPSQ-IIKEFAKT 133 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 ++EGE+ + S TE+ Y I KTA LF+ + S+++ + + Sbjct: 134 GMMMSEGEVLDV-YSPYERFTEDTYFKCITFKTASLFAYGAKNSAMVVCDDEKAWEKMFE 192 Query: 197 YGMNLGIAFQLVDDVLDY-------RGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 YG+NLGIA+QLVDD+L+Y EV + + + R G+ T+ VIL R Sbjct: 193 YGLNLGIAYQLVDDLLEYMNSYVEKSSEVESITLPMIYEGRYGERTVDVILELIR 247 >gi|15672163|ref|NP_266337.1| prenyl transferase [Lactococcus lactis subsp. lactis Il1403] gi|12723034|gb|AAK04279.1|AE006256_1 prenyl transferase [Lactococcus lactis subsp. lactis Il1403] Length = 326 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 85/313 (27%), Positives = 161/313 (51%), Gaps = 7/313 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLA 68 ++ V L+++R+ + + I ++ GGK +RP L L A ++ + + +A Sbjct: 15 LKDVQALMIERLKINNQEIEAALEKFASRGGKMVRPALFLLFAGIVPNGSKDEEKIIKIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 ++E +H+ATL+HDD++DDS LRRG + +G +V GDF+ + F ++IET + Sbjct: 75 ASLEMLHSATLIHDDIIDDSPLRRGLPSIESQFGKDVAVYAGDFVYTVYFELLIETMNGT 134 Query: 129 ALEALSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + A + + + +GEL Q+ + + + T Y+ I KTA L S + AG Sbjct: 135 SFVAKNAQSMKKILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYFAGGD 194 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ + + G +G+AFQ+ DD+L++ ++E K I DFR G TLP++LA + + Sbjct: 195 KKLQHSARKIGRAIGLAFQVYDDILNFTVGLDEADKPILTDFRQGIYTLPLLLAREVNDE 254 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + ++ N + +L + ++ E+ + A + A + +R LP+S+ + Sbjct: 255 AIAPYLEAPENLSRQECLDLAE---LVTESGGIAGALLVAGRLTELALNEIRKLPESTNR 311 Query: 308 KSLMEVVDFCLQR 320 + L E L+R Sbjct: 312 QILEEATQILLER 324 >gi|257467862|ref|ZP_05631958.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185] gi|317062151|ref|ZP_07926636.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185] gi|313687827|gb|EFS24662.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185] Length = 295 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 18/249 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E+I + +KY + +GGKRLRP+L +L +N + A AIE IH+ +L+HDD+ + Sbjct: 29 EVIAEGMKYAVLNGGKRLRPILLFMILDILGCEKENGIASAAAIEMIHSYSLVHDDLPAL 88 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACTLAEGE 144 D+ RRGK+ +G +L+GD LL+ AF ++ + K A + + +V T + Sbjct: 89 DNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFYILTDKNKHLPAEKVIEIVRLTSSYAG 148 Query: 145 LRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + + + +D+ E Y+H +KT L +E++ +I ++ L Sbjct: 149 INGMIGGQMIDIASEGKKIDLETLKYIH--SNKTGKLMKLPVELACIIGDADKEEKEILV 206 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + +G+AFQ+ DD+LD G+ + +GK +G D GK T P ++ G K K Sbjct: 207 KFADLIGLAFQIKDDILDIEGDFSTLGKPVGSDIELGKSTYPALI----GMAESKALLKE 262 Query: 256 TINDGKISV 264 TI + K V Sbjct: 263 TIAEAKTIV 271 >gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 299 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 136/246 (55%), Gaps = 15/246 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVL-LACAIEFIHTATLLHDDV 84 E+I ++Y +F+GGKRLRP+L L + ML + + VL +A AIE IHT +L+HDD+ Sbjct: 31 EIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQEINQKVLDIASAIELIHTYSLIHDDL 90 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA--FCM--VIETKSQEAL--EALSLV 136 +D+ LRRGK +V+G ++L GD LL+ A CM ++ + L A L Sbjct: 91 PAMDNDILRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWILRYGCDKNLVKAAKYLF 150 Query: 137 ACTLAEGELRQLSL---SKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQ 192 + EG + + + D+ E+ L + KT+ L A+ +L+AG ++ V Sbjct: 151 WASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVF 210 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+ YG NLG+AFQ+ DDVLD G+ ++GK+IG+D + K T ++ + +++ Sbjct: 211 DLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGKDIKEKKNTFVTFYGLEKAQQLVEHY 270 Query: 253 WKSTIN 258 + I+ Sbjct: 271 SQKAID 276 >gi|282852728|ref|ZP_06262070.1| polyprenyl synthetase [Lactobacillus gasseri 224-1] gi|282556470|gb|EFB62090.1| polyprenyl synthetase [Lactobacillus gasseri 224-1] Length = 324 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 131/241 (54%), Gaps = 8/241 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP---MLTLATALMLEYRGDNHVL 66 KDM +++ +IL + S ++ ++ GK LRP ML A + + D Sbjct: 23 KDMIEISHIILTHVNSVPGLLGQALEDTFAVPGKMLRPACVMLFGAFGPDADQKHDELQK 82 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A +IE +H ATL+HDD++D+S++R G+ + + +G +V GD+L+ A + + +++ Sbjct: 83 IATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLV--ALSLTLLSEN 140 Query: 127 QEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 ++L ++ T+ GE Q + + N+D++E++YL IK KT VLF A + + Sbjct: 141 AQSLHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFGLACFIGAYE 200 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G + + K +G LG AFQL DD+LDY + K + D ++G + P+I A Q Sbjct: 201 SGTKVTKALKAKKFGEYLGQAFQLRDDILDYTTTSSTFKKPVLLDVKDGIYSGPLIFALQ 260 Query: 244 R 244 Sbjct: 261 N 261 >gi|34557907|ref|NP_907722.1| polyprenyl synthetase ) [Wolinella succinogenes DSM 1740] gi|34483625|emb|CAE10622.1| POLYPRENYL SYNTHETASE ) [Wolinella succinogenes] Length = 300 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 113/201 (56%), Gaps = 8/201 (3%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 S GK LR L LA A + + L A+E I +A+LLHDDV+DD+ RRGK + Sbjct: 30 LSSGKMLRSKLILAIA----GESEESLSLCAAVELIQSASLLHDDVIDDAFTRRGKPSIN 85 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +GN+ ++++GD S+AF + A +S L+ GEL ++L++ ++ E Sbjct: 86 AAFGNKNAIMLGDIFYSKAFFELTRFSPLIA-RTVSHAVVRLSLGELADVTLAQTFNLEE 144 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 Y+ +I+ KTA L AA + ++L+ + +A + YG NLG+AFQ++DD+LD + Sbjct: 145 HLYMQMIEDKTASLIEAAAQAAALLVSRDS---EAFRIYGKNLGLAFQIIDDLLDITQDS 201 Query: 219 NEMGKNIGEDFRNGKPTLPVI 239 +GK DF GK TLP I Sbjct: 202 TTLGKPALNDFCEGKSTLPYI 222 >gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus Ellin6076] gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus Ellin6076] Length = 298 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 118/225 (52%), Gaps = 9/225 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I ++Y +F+GGKR+RP+L + A + AC++E IHT +L+HDD+ + Sbjct: 35 ETIHRAMRYSLFAGGKRIRPILCIEAARTVSDDCAGVAAAACSLELIHTYSLIHDDLPAL 94 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D+ RRGK+ V+G+ ++L GD LL+ AF ++ + + +A + + A G + Sbjct: 95 DNDDYRRGKLTNHKVFGDAMAILAGDSLLTLAFQVLAQLDAPDARKTRLIAELATASGTV 154 Query: 146 RQLSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + D+ E L I ++KT L A+L + ++ AG +AL YG Sbjct: 155 GGMIGGQVADLEGEGKPPDAQLLETIHRAKTGALLRASLRLGAIFAGAAEPQYEALSCYG 214 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++G+AFQ+VDD+LD +GK G+D K T P + + Sbjct: 215 QHVGLAFQIVDDILDVEESSEALGKTAGKDAAQHKITFPAVYGLE 259 >gi|300174004|ref|YP_003773170.1| geranyl pyrophosphate synthase [Leuconostoc gasicomitatum LMG 18811] gi|299888383|emb|CBL92351.1| Geranyl pyrophosphate synthase [Leuconostoc gasicomitatum LMG 18811] Length = 332 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 6/216 (2%) Query: 39 FSGGKRLRPMLTLA-TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 + GK +RP LTL + L + + + L ++E +H ATL+HDDV+D+S LRRG + Sbjct: 46 LNAGKLVRPALTLIFSQLSDQNYNKSAISLGASVELLHLATLIHDDVIDESKLRRGHESI 105 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-LAEGELRQLSLSKNLDV 156 + +G T+V GD+LL+ F + +++ + L+L A + GEL Q NLD Sbjct: 106 QSQFGKDTAVYAGDYLLTGMFSL-LDSADKPVANKLALTALQEILFGELVQKQNRYNLDT 164 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMNLGIAFQLVDDVLDYR 215 T Y IK KTA LF + + + N+ + + G N+GI FQL+DD LD+ Sbjct: 165 TFPTYFSQIKGKTAALFKLSATFGLVSSKTYNTELLDTVSKLGENIGITFQLLDDYLDFE 224 Query: 216 GEVN--EMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++ +GK IG+D RNG T P++ A +E Sbjct: 225 SIMDNLSLGKPIGQDIRNGIYTAPILFALADSEVQE 260 >gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies] Length = 385 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 83/271 (30%), Positives = 145/271 (53%), Gaps = 25/271 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKR+RP+L +A+ ++ ++ + ACA+E IHT +L+HDD+ + Sbjct: 119 EKIHEAMRYSLLAGGKRVRPILCIASCELVGGSEESVMPSACAVEMIHTMSLIHDDLPCM 178 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLV-------- 136 D+ LRRGK V+G +VL GD LL+ AF + TK EA + L ++ Sbjct: 179 DNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIACSTKGVEAEKVLRVIWELGRAIG 238 Query: 137 ACTLAEGELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + L G++ LS N+ + +Y+HV KTA L ++ + ++I G + + L Sbjct: 239 SEGLVAGQVVDLSSGGLSNVGLDLLEYIHV--HKTAALLEGSVVIGAIIGGGSDEEIERL 296 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + + +G+ FQ+VDD+LD E+GK +D K T P +L ++ + + K Sbjct: 297 RRFARCIGLMFQVVDDILDVTKSSQELGKTACKDLVADKLTYPKLLGLEKSREFAQELNK 356 Query: 255 STINDGKISVENLKKA--------FIIMREN 277 ++ +ISV +++KA +I R+N Sbjct: 357 QAMD--QISVFDVEKAKPLICLADYIAHRQN 385 >gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza] Length = 364 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/229 (31%), Positives = 124/229 (54%), Gaps = 15/229 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 MI D ++Y + +GGKR+RPML +A ++ + ACA+E IHT +L+HDD+ +D Sbjct: 99 MIHDAMRYSLLAGGKRVRPMLCIAACEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMD 158 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---- 142 + LRRGK V+G +VL GD LL+ AF + + A E + LA+ Sbjct: 159 NDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEFMATATTGVAPERILAAVGELAKAIGT 218 Query: 143 -----GELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G++ L+ + + +V + +++H+ KTA L A++ + +++ G + + L+ Sbjct: 219 EGLVAGQVVDLNCTGDANVGLDTLEFIHI--HKTAALLEASVVLGAILGGGSSDQIEKLR 276 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 ++ +G+ FQ+VDD+LD E+GK G+D K T P +L + Sbjct: 277 TFARKIGLLFQVVDDILDVTKSSEELGKTAGKDLAVDKTTYPKLLGLDK 325 >gi|223040963|ref|ZP_03611224.1| prenyl transferase [Campylobacter rectus RM3267] gi|222877760|gb|EEF12880.1| prenyl transferase [Campylobacter rectus RM3267] Length = 297 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 5/188 (2%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E IH A+LLHDDV+DD+ RRG + +G + +V++GD L S+ F + + + Sbjct: 52 CAIIELIHLASLLHDDVIDDAGTRRGSPSINASFGAKNAVMLGDILYSKGFYELSKFPHE 111 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A E +S L+ GE+ + LS + Y +I KTAVL AA V +++ G++ Sbjct: 112 IAGE-ISGAVSKLSVGEMMDVELSAKFNENIAAYETMIYYKTAVLIEAAAAVGAMLVGLE 170 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + K YG NLG+AFQ++DD+LD + +GK DF+ GK TLP I ++ + Sbjct: 171 T---RNFKIYGKNLGLAFQIIDDILDVTQDAATLGKPNFSDFKEGKTTLPYIYLYKSLNE 227 Query: 248 REKNFWKS 255 +K KS Sbjct: 228 ADKEALKS 235 >gi|296206331|ref|XP_002750182.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like, partial [Callithrix jacchus] Length = 308 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 83/285 (29%), Positives = 135/285 (47%), Gaps = 12/285 (4%) Query: 43 KRLRPMLT--LATALMLEYRGDNHV-----LLACAIEFIHTATLLHDDVVDDSALRRGKV 95 K RP++ +A A + + HV +A E IHTA+L+HDDV+DD++ RRGK Sbjct: 27 KAFRPIIVALMARACNIHHNNSQHVQASQRTIALIAEMIHTASLVHDDVIDDASSRRGKH 86 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 +WG + +VL GD +LS A + + + L+ V E QL +N + Sbjct: 87 TVDKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDSVRSEFLQLGSKENEN 146 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 YL KTA L + + + S++ V + YG N+GIAFQL+DDVLD+ Sbjct: 147 ERFAHYLEKPFKKTASLIANSYKAVSVLGCPDPVVHEIAYQYGKNIGIAFQLIDDVLDFT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 ++MGK D + G T PV+ A Q+ + + G ++ +A + Sbjct: 207 SCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPG-----DVDRARQYVL 261 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ + T Y A Y +A + L S + +L+++ + L R Sbjct: 262 QSDGVQQTTYLAQQYCHEAVREISKLRPSPERDALIQLSEIVLTR 306 >gi|227431314|ref|ZP_03913367.1| trans-hexaprenyltranstransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352907|gb|EEJ43080.1| trans-hexaprenyltranstransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 332 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 90/291 (30%), Positives = 148/291 (50%), Gaps = 13/291 (4%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 S GK +RP LTL + + + + ++L +IE +H ATL+HDD++D+S LRRG+ + + Sbjct: 47 SAGKLVRPALTLLFSELTDAPYNQKAIVLGASIELLHLATLIHDDIIDESKLRRGQDSIQ 106 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQE----ALEALSLVACTLAEGELRQLSLSKNL 154 +G T+V GD+LL+ ++ + + + ALEAL + GEL Q Sbjct: 107 AHFGKDTAVYAGDYLLTGMLSLLNDADNIQANKLALEALRNILF----GELTQKHNRYLT 162 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIA-GVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 D + ++ L I KTA LF ++ + + GV + + + G NLGIAFQL+DD LD Sbjct: 163 DTSFDNCLTQITGKTAALFKLSVLFGATSSDGVSSQLLDVVGKLGENLGIAFQLLDDYLD 222 Query: 214 YRG--EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 + E +GK G+D RNG T P++ A + + + DG I+ + L Sbjct: 223 FESITEQLSLGKPAGQDIRNGIYTAPILFALENPDINAELKDLLALRDG-ITDDQLVHIH 281 Query: 272 IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 ++ E+ A+ Y Q+ D L LP+++ ++ L + L R N Sbjct: 282 NVVLESDAMSRLNSLLAEYSQELDDLLNKLPNNALRQKLSHLATLLLNRKN 332 >gi|281490672|ref|YP_003352652.1| polyprenyl synthetase [Lactococcus lactis subsp. lactis KF147] gi|281374441|gb|ADA63962.1| Polyprenyl synthetase [Lactococcus lactis subsp. lactis KF147] Length = 326 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 85/313 (27%), Positives = 160/313 (51%), Gaps = 7/313 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLA 68 ++ V L+++R+ + + I ++ GGK +RP L L A ++ + + +A Sbjct: 15 LKDVQALMIERLKINNQEIEAALEKFASRGGKMVRPALFLLFAGIVPNGSKDEEKLIKIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 ++E +H+ATL+HDD++DDS LRRG + +G +V GDF+ + F ++IET + Sbjct: 75 ASLEMLHSATLIHDDIIDDSPLRRGLPSIESQFGKDVAVYAGDFVYTVYFELLIETMNGT 134 Query: 129 ALEALSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + A + + + +GEL Q+ + + + T Y+ I KTA L S + AG Sbjct: 135 SFVAKNAQSMKKILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYFAGGD 194 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ + + G +G+AFQ+ DD+L++ ++E K I DFR G TLP++LA + + Sbjct: 195 KKLQHSARKIGRAIGLAFQVYDDILNFTVGLDEADKPILTDFRQGIYTLPLLLAREVNDE 254 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + ++ N + +L + ++ E+ + A + A + +R LP+S + Sbjct: 255 AIAPYLEAPENLSRQECLDLAE---LVTESGGIAGALLVAGRLTELALNEIRKLPESPNR 311 Query: 308 KSLMEVVDFCLQR 320 + L E L+R Sbjct: 312 QILEEATQILLER 324 >gi|222823775|ref|YP_002575349.1| polyprenyl-diphosphate synthase [Campylobacter lari RM2100] gi|222538997|gb|ACM64098.1| polyprenyl-diphosphate synthase [Campylobacter lari RM2100] Length = 297 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 110/190 (57%), Gaps = 9/190 (4%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETK 125 CAI E IH A+LLHDDV+D++ LRRG + +G + ++++GD L S+AF +I+ K Sbjct: 52 CAIIELIHAASLLHDDVIDEAKLRRGVKSINAQFGAKNAIMLGDILYSKAFYELSLIDLK 111 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + +S L+ GEL ++LS+ + + YL +I +KTAVL A+ +L+A Sbjct: 112 ---LAKIISNAVVMLSVGELMDVNLSETFNTDKNAYLQMIYNKTAVLIEASARCGALLAN 168 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + YG NLG+AFQ+VDD+LD +G+ +GK DF+ GK TL + ++ Sbjct: 169 LN---EDDFAEYGKNLGLAFQIVDDILDIKGDEQTLGKPAMNDFKEGKTTLAYMYLHEKL 225 Query: 246 TKREKNFWKS 255 +++ KS Sbjct: 226 DSQDQKTLKS 235 >gi|315926233|ref|ZP_07922432.1| heptaprenyl diphosphate synthase component II [Pseudoramibacter alactolyticus ATCC 23263] gi|315620493|gb|EFV00475.1| heptaprenyl diphosphate synthase component II [Pseudoramibacter alactolyticus ATCC 23263] Length = 335 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 3/204 (1%) Query: 42 GKRLRP-MLTLATALMLEYRGDNH--VLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GK LRP +L L +L + V LA +E IH A+L+HDD++DD+ RRGK A + Sbjct: 54 GKMLRPRLLLLCASLGPAWHAHQREAVELAAMVELIHLASLIHDDIIDDARFRRGKPAIQ 113 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 +G +V GDF++++ ++ L+ + GE+ Q L D T+ Sbjct: 114 SRYGKDAAVYAGDFIMARVNYYQLKDGLNAPGAILAEAIEKMCAGEIGQARLRHRPDATQ 173 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 Y IK KT LF+AA + ++ G + L +G LGI FQL DD+LD+ Sbjct: 174 AMYFENIKGKTGALFAAACRIGAMTGGCAPEAIEQLARFGELLGILFQLRDDLLDFTAAP 233 Query: 219 NEMGKNIGEDFRNGKPTLPVILAF 242 E GK++ +D R G TLP+++A Sbjct: 234 LEDGKDVCQDVREGIYTLPLLIAL 257 >gi|15790228|ref|NP_280052.1| IdsA [Halobacterium sp. NRC-1] gi|169235957|ref|YP_001689157.1| trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase) [Halobacterium salinarum R1] gi|10580688|gb|AAG19532.1| geranylgeranyl diphosphate synthase [Halobacterium sp. NRC-1] gi|167727023|emb|CAP13809.1| putative trifunctional short-chain (E)-prenyl diphosphate synthase (probable dimethylallyltransferase / probable geranyltranstransferase / probable farnesytranstransferase) [Halobacterium salinarum R1] Length = 347 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 93/316 (29%), Positives = 160/316 (50%), Gaps = 22/316 (6%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN------------HVLL---AC 69 ++ E + + +Y++ +GGKRLRP + L TA L D HV + A Sbjct: 32 AEPERLYEASRYILEAGGKRLRPAVLLLTAEALADTSDTPPYREFPDCIGGHVDVMSAAV 91 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ 127 +IE I + TL+HDD++DD LRRG A + +T++L GD L S+AF +++ET + Sbjct: 92 SIEVIQSFTLIHDDIMDDDDLRRGSPAVHREYDTETAILAGDTLYSKAFEIMLETGAPPE 151 Query: 128 EALEALSLVA--CT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 L A+ +A CT + EG+ + DV ++YL +++ KTAVL++AA + L+ Sbjct: 152 RGLRAMRTLAETCTHICEGQAMDIDFETRGDVVTDEYLEMVELKTAVLYAAAATLPGLLL 211 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +AL +YG+ +G AFQ+ DDVLD E+GK G D K T+ + A + Sbjct: 212 SADEETVEALYNYGLRVGQAFQIQDDVLDLTVPSAELGKQRGSDLVEDKTTIITLHAAEH 271 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 G + D ++ ++ A +++ ++ A ++ K L LP++ Sbjct: 272 GVDVDGLLDAEDPAD--VTEAAVQAAVQALQDAGSIQYASDLAEDLVEEGKAHLEVLPEN 329 Query: 305 SWKKSLMEVVDFCLQR 320 + L ++ D+ ++R Sbjct: 330 EARHRLEQIADYLIER 345 >gi|269217208|ref|ZP_06161062.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC 700122] gi|269129345|gb|EEZ60430.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC 700122] Length = 353 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 91/295 (30%), Positives = 146/295 (49%), Gaps = 18/295 (6%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGKR RP++ LA + + V A AIE HTA L+HDD+ D++ LRRG+ L Sbjct: 63 NGGKRHRPLICLAACVAVGGDVRRAVSSAAAIEHFHTAALIHDDIADEATLRRGEPCLHL 122 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIE-------TKSQEALEALSLVACTLAEGELRQLSLSK 152 G ++ +GD LS V+ K + E + + T+ EG+ L ++ Sbjct: 123 TQGLGLAINMGDLGLSLVNGTVVRDPLLEDGVKVRVIAELIEMTRRTI-EGQALDLGWAR 181 Query: 153 N--LDVTEEDYLHVIKSKTAVLFSA-ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + D+T EDYL + KTA A L V +++ G + + L++YG++ G+AFQ+ D Sbjct: 182 DERYDITPEDYLVMATHKTAHYSGAVPLAVGAIVGGGSEAEIEGLRAYGLDTGLAFQIQD 241 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTINDGKISVENL 267 D+L+ G+ +GK+ D GK TL V+ A Q R + + + D + L Sbjct: 242 DLLNIEGDPAVVGKDFCSDITEGKRTLMVVHALQNSADRGRLVDILSAKTTD----ADTL 297 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM-EVVDFCLQRL 321 ++A IMR + ++ A AKD L L S +SL+ + D+ + RL Sbjct: 298 REAVAIMRASGSIDYARAYAEDLTNIAKDRLVGLIGPSPARSLLISMADYFVNRL 352 >gi|156848549|ref|XP_001647156.1| hypothetical protein Kpol_1036p41 [Vanderwaltozyma polyspora DSM 70294] gi|156117840|gb|EDO19298.1| hypothetical protein Kpol_1036p41 [Vanderwaltozyma polyspora DSM 70294] Length = 471 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 100/334 (29%), Positives = 147/334 (44%), Gaps = 57/334 (17%) Query: 38 IFSGGKRLRPMLTLATALMLE--YRGDNHVL-----LACAIEFIHTATLLHDDVVDDSAL 90 I G K L P LT + E + DN +L LA +E IHTA+LLHDDV+D S Sbjct: 142 ILHGIKPLNP-LTKGPEPIPEASFDNDNGILPKQRRLAEIVEMIHTASLLHDDVIDHSET 200 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-- 148 RRG+ + + N+ +VL GDFLL +A + ++ E +E +S L EGE QL Sbjct: 201 RRGRPSGNKAFTNKMAVLAGDFLLGRATVSISRLRNPEVVELMSNSIANLVEGEFMQLKN 260 Query: 149 -SLSKNLDVTEED----------------------------------------YLHVIKS 167 ++ NL+ +E YLH Sbjct: 261 TAVDNNLNTIDEGRKELPPSIGKFTNDLHDYRVPINDNLLTSKDAMINTAFEYYLHKTYL 320 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KTA L S A S++++G V + YG NLGI FQLVDD+LD+ +GK Sbjct: 321 KTASLISMACRSSAILSGASPEVVDSCYEYGKNLGICFQLVDDMLDFTVSSENLGKPARA 380 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287 D + G T PV+ A++ + ++ G VE K+ I ++ + T+ A Sbjct: 381 DLKLGIATAPVLYAWREDPSLTELILRNFTQPG--DVEAATKSVI---QHNGVQKTKELA 435 Query: 288 YSYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQR 320 Y A +LR P+S + +L + + L R Sbjct: 436 EKYRDAALANLRSSFPESDARSALEFLTNTILSR 469 >gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota subsp. sativus] Length = 367 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 128/231 (55%), Gaps = 14/231 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 +I + ++Y + +GGKR+RP+L +A+ ++ + +ACA+E IHT +L+HDD+ +D Sbjct: 102 IIHEAMRYSLLAGGKRVRPVLCIASCELVGGLESWAMPMACALEMIHTMSLIHDDLPCMD 161 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-------CMVIETKSQEALEALSLVACT 139 + LRRGK V+G +T++L GD LLS AF MV + A+ L + Sbjct: 162 NDDLRRGKPTNHKVYGEETAILAGDALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGS 221 Query: 140 --LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ + + K++D+ + +Y+HV KT+ L A++ +++ G + L+ Sbjct: 222 QGLVAGQIMDICNQGKDVDLNDLEYIHV--HKTSKLLEASVVCGAILGGGNVIEVERLRK 279 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 Y +G+ FQ+VDD+LD E+GK G+D K T P ++ +R + Sbjct: 280 YARCIGLLFQVVDDILDVTKSSAELGKTAGKDLVTDKTTYPKLMGLERAKR 330 >gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota] Length = 367 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 128/231 (55%), Gaps = 14/231 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 +I + ++Y + +GGKR+RP+L +A+ ++ + +ACA+E IHT +L+HDD+ +D Sbjct: 102 IIHEAMRYSLLAGGKRVRPVLCIASCELVGGLESWAMPMACALEMIHTMSLIHDDLPCMD 161 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-------CMVIETKSQEALEALSLVACT 139 + LRRGK V+G +T++L GD LLS AF MV + A+ L + Sbjct: 162 NDDLRRGKPTNHKVYGEETAILAGDALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGS 221 Query: 140 --LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ + + K++D+ + +Y+HV KT+ L A++ +++ G + L+ Sbjct: 222 QGLVAGQIMDICNQGKDVDLNDLEYIHV--HKTSKLLEASVVCGAILGGGNVIEVERLRK 279 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 Y +G+ FQ+VDD+LD E+GK G+D K T P ++ +R + Sbjct: 280 YARCIGLLFQVVDDILDVTKSSAELGKTAGKDLVTDKTTYPKLMGLERAKR 330 >gi|217039783|gb|ACJ76979.1| geranyl diphosphate synthase [Linum usitatissimum] Length = 209 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 13/188 (6%) Query: 42 GKRLRP--MLTLATALMLEYRGDNHVLLACAI-----------EFIHTATLLHDDVVDDS 88 GKR RP +L +ATAL + N V ++ + E IH A+LLHDDV+DD+ Sbjct: 19 GKRFRPTVLLLMATALNVHLPIPNSVPVSTELRARQQRIAEITEMIHVASLLHDDVLDDA 78 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG + LV GN+ +VL GDFLLS+A + ++ E + L+ V L GE Q+ Sbjct: 79 DTRRGIKSLNLVMGNKVAVLAGDFLLSRACVALASLRNTEVVSLLATVVEHLVTGETMQM 138 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 + + + E Y+ KTA L S + + +L+AG V YG NLG+AFQL+ Sbjct: 139 TTTSEQRCSMEYYMQKTYYKTASLISNSCKAVALLAGQTTEVATLAFEYGRNLGLAFQLI 198 Query: 209 DDVLDYRG 216 DDVLD+ G Sbjct: 199 DDVLDFTG 206 >gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas acetoxidans DSM 684] gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas acetoxidans DSM 684] Length = 297 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/260 (29%), Positives = 129/260 (49%), Gaps = 21/260 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y +F+GGKRLRP+L +A + +N + ACA+E IHT +L+HDD+ Sbjct: 34 EAMHYSVFAGGKRLRPILMMAACEAVGGDIENVLPAACAMEMIHTYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVACTLAEG 143 LRRG+ V+G T++L GD LL++AF ++ ++ + E + L+A Sbjct: 94 LRRGQPTNHKVFGEATAILAGDALLTEAFVVLSAPSDSVQINDRTRREVIQLLARAAGAA 153 Query: 144 ELRQLSL-------SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + + + D+ DY+H KT L A++ +L+ G +AL Sbjct: 154 GMVGGQIVDMEAEGMEQPDLATVDYIHA--HKTGALILASIRAGALLGGANTEQYEALSR 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 +G G+AFQ+ DD+LD G+ ++GK+IG D GK T P +L +R + Sbjct: 212 FGKLAGLAFQIADDILDITGDQEQLGKDIGSDQERGKATYPAVLGLSESIRRATELHQQA 271 Query: 257 INDGKISVENLKKAFIIMRE 276 + ++E L A +R+ Sbjct: 272 LK----ALEPLADAAEPLRQ 287 >gi|227530643|ref|ZP_03960692.1| trans-hexaprenyltranstransferase [Lactobacillus vaginalis ATCC 49540] gi|227349424|gb|EEJ39715.1| trans-hexaprenyltranstransferase [Lactobacillus vaginalis ATCC 49540] Length = 325 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 91/313 (29%), Positives = 150/313 (47%), Gaps = 9/313 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVLLA 68 +E+VN LI +RI + + +K + GGK LRP L A + + + +A Sbjct: 16 LEEVNHLINQRITVNNTDLQAALKQMASKGGKYLRPAFCLTFARLGGKNSWNSSKLIKIA 75 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQ 127 ++E +H ATL+HDDV+DDS RRG + + +G T+V GD L + F +++ET +S Sbjct: 76 SSLEILHMATLIHDDVIDDSPERRGAPSIQKAFGKDTAVYSGDLLFTVFFDLLVETMESS 135 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L + + GEL Q++ + + +Y I KTA LFS A + + G Sbjct: 136 PYLATNAQAMRKILAGELGQMN-QRYQQQSLLEYYRNINGKTATLFSLAAQEGAHFGGAD 194 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 K G N+GI FQ++DD+LDY ++ K I ED G +LP++L + K Sbjct: 195 ARTVHLAKHIGQNIGITFQILDDMLDYTTN-KKLNKPILEDLATGVYSLPLLLVLKEHHK 253 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + +++VE+ ++ ++ + + A + KA + LP S + Sbjct: 254 ELDPYLAKK---QEMTVEDTQEVQRLVNQYGGVKQAHELAGKFTNKALQLIDELPTSPTQ 310 Query: 308 KSLMEVVDFCLQR 320 K L +V L R Sbjct: 311 KLLKKVTIQLLDR 323 >gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis] Length = 383 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 86/274 (31%), Positives = 142/274 (51%), Gaps = 30/274 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKR+RP+LT+A ++ + + ACA+E IHT +L+HDD+ + Sbjct: 116 EKIHEAMRYSLLAGGKRIRPILTIAACELVGGSEELAMPTACAMEMIHTMSLIHDDLPSM 175 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAEGE 144 D+ LRRGK+ V+G T+VL GD LLS AF + + T+ A + V L + Sbjct: 176 DNDDLRRGKLTNHKVFGEGTAVLAGDALLSFAFEHIAVSTRKTVASHRVLRVVSELGKAI 235 Query: 145 LRQ-LSLSKNLDVTEE----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 Q ++ + D+T E +++H+ KTAVL A+ ++I G + + Sbjct: 236 GSQGVAGGQVADITSEGDPSVGLETLEWIHI--HKTAVLLECAVVSGAIIGGASENEIER 293 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 Y +G+ FQ+VDD+LD E+GK G+D + K T P ++ G ++ K F Sbjct: 294 TGRYARCVGLLFQVVDDILDVTRSSEELGKTAGKDLVSDKATYPKLM----GLEKAKEFA 349 Query: 254 KSTINDGK--ISVENLKKA--------FIIMREN 277 ++ K +S N KA +I +R+N Sbjct: 350 DELLDRAKEELSCFNPAKAAPLLGLADYIALRQN 383 >gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba] gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba] gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba] Length = 391 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 79/248 (31%), Positives = 129/248 (52%), Gaps = 20/248 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKR+RP L +A ++ D + ACA+E IHT TL+HDD+ + Sbjct: 124 EKIHESMRYSLLAGGKRVRPTLCIAACELVGGTEDLAMPAACAMEMIHTMTLIHDDLPCM 183 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-LEALSLVACTLAE-- 142 D+ LRRGK +G T+VL GD LLS AF + + S+ E + V C L + Sbjct: 184 DNDNLRRGKPTNHKAFGEDTAVLAGDALLSFAFEHIARSTSKTVESERVLRVICELGKSM 243 Query: 143 -------GELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 G++ ++ + +D+ +Y+H+ KTAVL ++ ++I G + Sbjct: 244 GSEGLVAGQIVDIASEGDTSVDLKTLEYIHL--HKTAVLLECSVVSGAIIGGASEEEIER 301 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 + Y +G+ FQ+VDD+LD E+GK G+D + K T P ++ G ++ K F Sbjct: 302 TRRYARCVGLLFQVVDDILDVTKTSEELGKTAGKDLISDKATYPKLM----GLEKAKEFA 357 Query: 254 KSTINDGK 261 +N K Sbjct: 358 VELVNKAK 365 >gi|302554703|ref|ZP_07307045.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] gi|302472321|gb|EFL35414.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] Length = 344 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 146/285 (51%), Gaps = 6/285 (2%) Query: 42 GKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GK +RP L +A A + E + + +A A+E +H +LLHDDV+D+ +RR + A Sbjct: 58 GKYVRPTLAVACARAIGGEAAVKSAIPVAVAVELVHDFSLLHDDVMDEGTVRRHRPTAWS 117 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEA---LEALSLVACTLAEGELRQLSLSKNLDV 156 ++G +VL GD L+++A+ ++ + + ++ L+ L G+ L+ ++V Sbjct: 118 LFGTSKAVLAGDLLVAEAYRLLASSGCDDPERLVKILAQAVHDLCVGQAMDLAFEDRVEV 177 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T + ++ KT+ L +AA E+ +L AG + ++G +LG+ FQLVDD+L G Sbjct: 178 TLAETNAMVSGKTSALIAAACELGALTAGADAEAAAVMCAFGGHLGMLFQLVDDILGVWG 237 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + GK +G D + K +LPV+ A + GT ++ + ++ E++ KA + E Sbjct: 238 DPGVTGKPVGADVASRKKSLPVVAALEAGTDASRSLAALYRSADPLTSEDVAKATQWVEE 297 Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWK-KSLMEVVDFCLQR 320 E A Q A+D L + +W L+ ++ F ++R Sbjct: 298 AGGRAWAEAEATRLRQAAQDCLEQVGADAWAFNDLLSLMRFLVER 342 >gi|311693472|gb|ADP96345.1| geranyltranstransferase [marine bacterium HP15] Length = 298 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 14/235 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP L LA A + GD ++ AC++E IH +L+HDD+ +DD Sbjct: 38 EAMRYSVLGGGKRIRPALCLAAAKAMGQTGDEALIPACSVELIHAYSLIHDDLPAMDDDE 97 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-QEALEALSLVACTLAEGELRQL 148 LRRG+ + + T++L GD L + AF + E E++ + + A G + Sbjct: 98 LRRGRPTTHIAFDEATAILAGDALQALAFGWLAEAPGLSESVRLIMVRELARASGHGGMV 157 Query: 149 --------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA-GVQNSVRQALKSYGM 199 S+ K L + + + +H + KT L ++ + +L A V +L Y Sbjct: 158 GGQAIDLESVGKTLALAQLETMH--RHKTGALIETSVRIGALTAPSVDEQALASLTQYAK 215 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 LG+AFQ+ DD+LD G+ +GK G D KPT P +L + + N + Sbjct: 216 ALGLAFQVQDDLLDIEGDTTVIGKPQGSDAARAKPTYPALLGLEGAREHLANLLE 270 >gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens] gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens] Length = 288 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 84/271 (30%), Positives = 136/271 (50%), Gaps = 25/271 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKR+RP L +A ++ + + ACA+E +HT +L+HDD+ + Sbjct: 22 EKIREAMRYSLLAGGKRVRPALCIAACELVGGNEEMSMPAACAMEMVHTMSLIHDDLPCM 81 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVAC------ 138 D+ LRRGK V+G T+VL GD LL+ AF + +T A L ++A Sbjct: 82 DNDDLRRGKPTNHKVFGEDTAVLAGDALLTYAFEHIARDTTGVPADRVLRVIAHLGKAVG 141 Query: 139 --TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ ++ + V E +V KTAVL +++ +++ G L Sbjct: 142 SEGLVAGQIVDIASEGDPTVGLETLEYVHTHKTAVLLESSVVCGAILGGASEDEISRLSK 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y N+G+ FQ+VDD+LD E+GK G+D K T P +L G ++ K F + Sbjct: 202 YARNVGLLFQVVDDILDVTKSSAELGKTAGKDLLADKATYPKLL----GLEKSKAFAEEL 257 Query: 257 INDGK--ISVENLKKA--------FIIMREN 277 K +SV + +KA +I R+N Sbjct: 258 TRKAKDQLSVFDQQKAAPLLGLADYIAYRQN 288 >gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455] gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455] Length = 297 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 117/217 (53%), Gaps = 12/217 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y + +GGKRLRP+L +A A ++ + ++ + +A A E HTA+L+HDD+ +D+ + Sbjct: 35 EAMNYSLLAGGKRLRPILCMAGAEIMGEKAESVLPMATAFEMAHTASLIHDDLPCMDNDS 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQEALEALSLVACTLAEG 143 LRRGK +V+G ++L GD L AF + + Q + AL+L A L Sbjct: 95 LRRGKPTNHVVYGESLALLAGDALFLDAFETALAGLLKNGAEPQRCVRALALFAQALGPE 154 Query: 144 EL---RQLSLSKNLDVTEEDYL-HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + L + E D++ V KT VL A+L +++AG + L YG Sbjct: 155 GICGGQVLDTDRASQTDERDFVVDVASMKTMVLIRASLCAGAILAGADGEALRRLMKYGE 214 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 N+G+AFQ+ DD+LD G + MGK +G+D K T Sbjct: 215 NVGLAFQIADDLLDCTGSQSAMGKTLGKDEAQDKRTF 251 >gi|167042947|gb|ABZ07661.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote HF4000_ANIW137N18] Length = 273 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 80/273 (29%), Positives = 140/273 (51%), Gaps = 10/273 (3%) Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 ML R + + A A+E IH TL+HDD++D+ +R G + ++L GD L S Sbjct: 1 MLGGRQSDAIAAASAVEMIHNFTLVHDDIMDNDEMRHGVPTTHKKFDMPLAILAGDVLYS 60 Query: 116 QAFCMVIETKSQ-------EALEALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKS 167 +A+ I +KS+ + + LS + EG++ + ++N + T ++Y+ +I+ Sbjct: 61 KAY-HTISSKSKLSSNYTTQLVSKLSKTCVEICEGQVGDIKFAENKRIPTGKEYIKMIEK 119 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KTAVLF + + ++ A + + L S+G NLGI FQ+ DD+L G+ K +G Sbjct: 120 KTAVLFEVSCAMGAICAKRKQKDVKNLSSFGKNLGIVFQITDDLLGIIGDSKITKKPVGN 179 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287 D R GK TLP+ILA ++ + K + K S + ++ A ++R + Sbjct: 180 DIREGKKTLPIILAIKKAKGKNKKIILRVFGNSKASKQQIRLAVNVIRSLGVEEEVGNMI 239 Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 Y Q+AK SL ++ K ++ ++DF ++R Sbjct: 240 LKYAQRAKKSLSSYTGTA-KNEIISLLDFVIKR 271 >gi|291518883|emb|CBK74104.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens 16/4] Length = 306 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 81/242 (33%), Positives = 122/242 (50%), Gaps = 14/242 (5%) Query: 21 KRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATAL----MLEYRGDNHVLLACAIEFIH 75 KRI S +I + YL + GK +R LA ++ M+ Y + V+ A A+E +H Sbjct: 20 KRILHSGPSLISNYTGYLSDATGKMMRASALLAASMNEEGMVPY---DAVIFASAVEILH 76 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-- 133 ATL+HDD++DD+ RRG + + G +T+V+ GD+LL+ A + + + E + Sbjct: 77 LATLVHDDIMDDADTRRGLITLQKKAGKRTAVICGDYLLAAAINELSKVVTDEKYKKFNF 136 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 S ++A GELRQ ++N + YL +I KTA LF AA +L + Sbjct: 137 SRYVESIALGELRQNINNRNFRLKTFRYLSIIDGKTAALFEAAYHAGALAGDADEQQIKL 196 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT----KRE 249 + G GI FQL DD +D+ K + DF+NG TLP+I F + K E Sbjct: 197 FRKLGRYTGIIFQLTDDCIDFENTKETALKPVMSDFQNGVVTLPLIHTFSKNPSLIEKAE 256 Query: 250 KN 251 KN Sbjct: 257 KN 258 >gi|206900678|ref|YP_002251005.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps) [Dictyoglomus thermophilum H-6-12] gi|206739781|gb|ACI18839.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps) [Dictyoglomus thermophilum H-6-12] Length = 343 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 4/213 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GKRLRP+ + L D+ + + AIEF+H +L+HDD+ D R GK +W Sbjct: 54 GKRLRPLFCVLVNQTLNGVLDDALEIGSAIEFLHNFSLVHDDIQDQDEKRHGKWTVWKIW 113 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT----LAEGELRQLSLSKNLDVT 157 G ++ VGD L + F ++ KS L L EG+ +S K D++ Sbjct: 114 GEAQAINVGDLLFNMVFQVLTNLKSPLLLSKSLKELTETIRELIEGQYLDISFEKRKDIS 173 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 ++YL +I KTA LFS + + + A + + + + G N G+ FQ+ DD + G+ Sbjct: 174 LKEYLMMIDKKTAKLFSTSFYLGAFSATYKEEISKLFQDIGRNFGLFFQIADDAMGIWGD 233 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + GKN D K T P++ + + +EK Sbjct: 234 PEKTGKNAFADLWRKKKTYPILYLYSEASDKEK 266 >gi|152979039|ref|YP_001344668.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z] gi|150840762|gb|ABR74733.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z] Length = 296 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 83/266 (31%), Positives = 136/266 (51%), Gaps = 20/266 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + D +KY + GGKR+RP L AT ML + A AIE IH +L+HDD+ +D+ Sbjct: 33 LADAMKYGLLLGGKRIRPFLVYATGDMLGADLNALDYAAAAIESIHAYSLIHDDLPAMDN 92 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRGK + + + T++L GD L + AF ++ ++ + A + L LV +R Sbjct: 93 DELRRGKPTCHIAFDHATAILAGDALQTFAFEIITKSTALCAEQKLKLVQELSRAAGVRG 152 Query: 148 LSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKS 196 + L ++LD+ E + +H ++KT L +AAL + + + +++ LK Sbjct: 153 MCLGQSLDLLAEQKKVTLAELELIH--RNKTGALLTAALMMGFICSPHYANHALACRLKQ 210 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y +G+AFQ+ DD+LD G E+GK +G D K T P +L + + ++S Sbjct: 211 YADAIGLAFQVRDDILDIEGNTVEIGKTVGADLNLDKSTYPKMLGLDGAKSKAQELYQSA 270 Query: 257 I-NDGKISVENLK----KAFIIMREN 277 + N +IS + FII R+N Sbjct: 271 VKNLNEISFDTTALRALAEFIIHRKN 296 >gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902] gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902] Length = 296 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 124/239 (51%), Gaps = 14/239 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + D ++Y + +GGKRLRP+L LA + + V A A+E IHT +L+HDD+ Sbjct: 32 ESLRDAMRYSLLAGGKRLRPILCLAACELAGGEAKHAVPTAVALEMIHTMSLIHDDLPAM 91 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-------ALSLVAC 138 +RRG+ V+G ++L GD LL++AF MV E LSLVA Sbjct: 92 DDDDVRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSPGVPAERLLKVVGELSLVAG 151 Query: 139 T--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L S K +D+ +Y+H+ KT L SA + +LI +++ AL+ Sbjct: 152 APGLVGGQVVDLESEGKQVDLETLEYIHL--HKTGALLSACVITGALIGNADDTLITALR 209 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 +Y +G+AFQ++DD+LD +GK G+D K T P +L + KR + + Sbjct: 210 TYARGIGLAFQIIDDILDITASSEVLGKTAGKDLLADKTTYPKLLGLEESRKRADDLVR 268 >gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428] gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428] Length = 293 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 25/243 (10%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 L R I ++Y +F+GGKRLRP LTLA A + + ACA+E IHT + Sbjct: 21 FLPRASVKPRTIHKAMRYSLFAGGKRLRPALTLAAAEACDGEVARALPAACAVECIHTYS 80 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ LRRG+ + V+G +VL GD LL+ AF ++ + K + +L+ Sbjct: 81 LIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDALLTIAFEILAQAKETSRYKMPALI 140 Query: 137 ACTLAEGELRQLSLS---------------KNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 GEL S S K + E Y+H + KTA L +A++ + Sbjct: 141 ------GELAGASGSQWLIGGQVADLEGEGKKISGAELKYIH--RCKTAALLTASIRLGG 192 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + A + + L +G +LG+AFQ++DD+LD ++GK G+D K T P I Sbjct: 193 MSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQTTEKLGKTAGKDVAATKATYPAIFG 252 Query: 242 FQR 244 +R Sbjct: 253 LER 255 >gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab] gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab] Length = 297 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 123/241 (51%), Gaps = 14/241 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L LA + + + ACA+E IHT +L+HDD+ + Sbjct: 33 ERIYEAMRYSLLAGGKRLRPILCLAACELAGGSVEQAMPTACALEMIHTMSLIHDDLPAM 92 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALS-----LV 136 D+ RRGK V+G ++L GD LL+ AF + Q L+ ++ + Sbjct: 93 DNDDFRRGKPTNHKVFGEDIAILAGDALLAYAFEHIASQTRGVPPQLVLQVIARIGHAVA 152 Query: 137 ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L S K + + +Y+H KT L A++ ++AG + L Sbjct: 153 ATGLVGGQVVDLESEGKAISLETLEYIH--SHKTGALLEASVVSGGILAGADEELLARLS 210 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y ++G+AFQ+VDD+LD ++GK G+D K T P +L + ++ + +S Sbjct: 211 HYARDIGLAFQIVDDILDVTATSEQLGKTAGKDQAAAKATYPSLLGLEASRQKAEELIQS 270 Query: 256 T 256 Sbjct: 271 A 271 >gi|291299508|ref|YP_003510786.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728] gi|290568728|gb|ADD41693.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728] Length = 368 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 1/203 (0%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGK LRP LTL A + D V A A+E +H +LLHDDV+D RR + Sbjct: 65 NGGKALRPALTLLCAEAAGGQADEAVPAAVAVELVHNFSLLHDDVIDGDRTRRHRATVWA 124 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 V+G T++L GD LLS AF ++ E++ + L+ L +G+LR + L +DV+ Sbjct: 125 VFGRPTAILAGDSLLSLAFEVLAESRPA-GVGVLAEAVTRLNDGQLRDMDLETRVDVSLA 183 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 + + KT L +AA + + G +G LG+AFQ DD+L G+ Sbjct: 184 ECRDMAARKTGALMAAACRLGAESGGADGERAGRFADFGGALGLAFQAADDLLGIWGDAQ 243 Query: 220 EMGKNIGEDFRNGKPTLPVILAF 242 GK +G D N K +LPV A Sbjct: 244 VTGKPVGSDLVNRKRSLPVTAAL 266 >gi|297616623|ref|YP_003701782.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297144460|gb|ADI01217.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 301 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 84/254 (33%), Positives = 130/254 (51%), Gaps = 23/254 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 ++I + Y +F+GGKRLRP+L L +A ++ + +ACA+E IH+ +L+HDD+ Sbjct: 35 QVIHRAMHYAVFNGGKRLRPILVLESAQVVGKDLTRALPVACAMEMIHSYSLVHDDLPAM 94 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----------ALS 134 LRRGK V+G ++L GD LL+ AF ++ +E A + Sbjct: 95 DDDDLRRGKPTCHKVFGEANAILTGDALLTLAFEIMTACAELPGMEPRYVAKVVRETARA 154 Query: 135 LVACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + + + G++ L L K+ D LH KT LF A L +L+ GV++ QA Sbjct: 155 VGSLGMVGGQVLDLELEGKDTDFFTLKTLH--SKKTGALFRACLRAGALLFGVEDERLQA 212 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L Y N G+AFQ+ DD+LD G+ GK +G D + K T P +L G K Sbjct: 213 LTRYAENFGLAFQITDDILDVEGDEKITGKPVGSDEKKQKVTYPSLL----GMDEAKKLA 268 Query: 254 KSTINDGKISVENL 267 KS++ + +VE+L Sbjct: 269 KSSVEE---AVESL 279 >gi|290968407|ref|ZP_06559947.1| polyprenyl synthetase [Megasphaera genomosp. type_1 str. 28L] gi|290781594|gb|EFD94182.1| polyprenyl synthetase [Megasphaera genomosp. type_1 str. 28L] Length = 337 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 74/231 (32%), Positives = 123/231 (53%), Gaps = 5/231 (2%) Query: 33 VVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA--IEFIHTATLLHDDVVDDSA 89 V++ + S GK +RP L +A + Y L A IE H+A+L+HDD+VD++ Sbjct: 46 VLQDAVSSQGKMIRPRLVIMAGSFGKRYAEAEERLYKAAALIEMTHSASLIHDDIVDEAP 105 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRGK + + +G +V GDFL+S+ +++ ++ L+ + GE+ Q Sbjct: 106 LRRGKPSVQRRYGKSAAVYAGDFLMSRITYHLMQEGLMQSGMVLAKAVEAMCAGEITQAL 165 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 DVT +YL I KT LF AA + +L +G S+ + L++ G LG FQ+ D Sbjct: 166 CRYRADVTLAEYLQNIYGKTVALFRAACRMGALESGCDESLIRRLENVGEALGYMFQMRD 225 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--RGTKREKNFWKSTIN 258 D+LD+ ++GK +DFR G T+PV+ A + +G K + + + ++ Sbjct: 226 DLLDFLPVTEQIGKASHQDFREGIYTMPVLYACETPQGRKMLRPYMERSVQ 276 >gi|18312349|ref|NP_559016.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2] gi|18159799|gb|AAL63198.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2] Length = 334 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 99/346 (28%), Positives = 173/346 (50%), Gaps = 40/346 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPD---VVKYLIFSGGKRLRPMLTLATALML 57 M +L L K E V L+R S +++ PD V Y + +GGKRLRP+LTLATA + Sbjct: 1 MDVLSKLHAKYGEAVE-QALERYLS-IDLAPDFRDAVMYQVKTGGKRLRPLLTLATAEAI 58 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 + + A +E IH +L++DD++D LRRG R +G+ ++L+G + Sbjct: 59 SGQWKPALPAAAIVELIHNYSLIYDDIIDRGDLRRGMPTVRKAYGDNAAILIGIWYREAI 118 Query: 118 FCMVIETKSQEAL-EALSLVACTLAEGELRQLSL------------SKNLDVTEEDYLHV 164 V++T ++ V + EGE + ++ +VT +DY+ + Sbjct: 119 EEAVLDTPKPTLFAREVAKVIKAIDEGERLDILFEYAGREDPYFVKARWREVTLDDYIKM 178 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KT VL AA + +L + A ++G+N G+AFQ++DDVLD G+ + GK Sbjct: 179 VSLKTGVLIGAAAKWGALSVSDDAEIADAAWNFGLNAGVAFQVIDDVLDIYGDPKKFGKE 238 Query: 225 IGEDFRN---GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281 IG+D + G + V L+ KR++ +S++N+ +A + RE +L+ Sbjct: 239 IGKDIKEHKRGNAVVAVGLSKLPPDKRDRLL-------HILSLQNVGEAEV--REAVSLL 289 Query: 282 DTEYR-------AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 D+ A+ Y ++A+ L +P++ ++L E++ F L+R Sbjct: 290 DSVGAREEALKIAHKYREEAERHLARIPNN---ETLRELLYFILER 332 >gi|254672305|emb|CBA05414.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha275] Length = 171 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 60/138 (43%), Positives = 90/138 (65%), Gaps = 6/138 (4%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + Y + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTR 120 Query: 117 AFCMVIETKSQEALEALS 134 AF +++ + S LE ++ Sbjct: 121 AFQLMVASGSMRVLEVMA 138 >gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 299 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 82/246 (33%), Positives = 133/246 (54%), Gaps = 15/246 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVL-LACAIEFIHTATLLHDDV 84 E+I ++Y +F+GGKRLRP+L L + M+ D +L +A AIE IHT +L+HDD+ Sbjct: 31 EIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQIVDEKILDIASAIELIHTYSLIHDDL 90 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA--FCM--VIETKSQEAL--EALSLV 136 +D+ LRRGK +V+G ++L GD LL+ A CM ++ + L A L Sbjct: 91 PAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWILRYGCDKNLVKAAKYLF 150 Query: 137 ACTLAEGELRQLSL---SKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQ 192 + EG + + + D+ E+ L + KT+ L A+ +L+A ++ V Sbjct: 151 WASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQASCVCGALVAAAEDDVVS 210 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+ YG NLG+AFQ+ DDVLD G+ ++GK+IG+D + K T + + +++ Sbjct: 211 DLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGKDIKEKKNTFVTFYGLGKAQQLVEHY 270 Query: 253 WKSTIN 258 K I+ Sbjct: 271 SKKAID 276 >gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ] gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ] Length = 297 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 30/269 (11%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y IF+GGKR+RP+L LA + + D + ACA+E IHT +L+HDD+ Sbjct: 35 AMRYSIFAGGKRVRPVLMLAACEAVGGQIDKAMPAACAMEMIHTYSLIHDDLPAMDDDDF 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS-------LVACT---- 139 RRG+ V+G ++L GD LL++AF ++ + + ++ + + C Sbjct: 95 RRGRPTNHKVFGEAIAILAGDGLLTEAFKLMSDPRFAAGIDPAARLGVIHEIATCAGTYG 154 Query: 140 LAEGELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + G++ + ++D+ Y+H KT L A++ +L+ G + A++ Y Sbjct: 155 MVGGQVVDMESEGKPDMDLPTVQYIHA--HKTGALIKASVVAGALLGGADDKQLAAIRRY 212 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G G+AFQ+ DD+LD G E+GK+ G D GK T P ++ G K ++ + Sbjct: 213 GEAAGLAFQIADDILDIEGTTEEIGKDAGSDEARGKATYPAVM----GLAAAKQEAQAMM 268 Query: 258 NDGKISVENLKKA---------FIIMREN 277 ++ +++E L A +I+ R+N Sbjct: 269 DEAMLALEPLGAAAEPLRAIARYIVERKN 297 >gi|77361281|ref|YP_340856.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas haloplanktis TAC125] gi|76876192|emb|CAI87414.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas haloplanktis TAC125] Length = 295 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 11/238 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I Y + +GGKRLRP L AT ML + +LA AIE IH+ +L+HDD+ + Sbjct: 30 ETIKAATHYSLMNGGKRLRPFLVYATGKMLGADKQDLDVLAAAIECIHSYSLVHDDLPAM 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE- 144 DD LRRG+ +V+G ++L GD L + AF ++ + + +A + LA Sbjct: 90 DDDELRRGRPTCHIVYGEAHAILAGDALQALAFELIAKHNFNCSAQAQVKMIAELAHASG 149 Query: 145 LRQLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIA-GVQNSVRQALKS 196 L+ + + LD+ D + + K KT L S A+ + +L + V + + L + Sbjct: 150 LQGMVAGQGLDIAATDKVITVAELERIHKLKTGALISCAITLGALCSNNVSQNTLENLAT 209 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 +G +G+AFQ+ DD+LD G+ +GK G D K T P +L ++ +N + Sbjct: 210 FGYAIGLAFQVHDDILDVEGDTVTLGKPQGSDIAANKATYPALLGMLGAKEKAQNLIQ 267 >gi|307323924|ref|ZP_07603133.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306890373|gb|EFN21350.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 342 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 10/310 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 +R + E + + +Y + GK LRP+L + +A + G V A ++E++H +L+ Sbjct: 31 RRWPPEAERLHQISRYALLPAGKLLRPLLLMESAEAVGGGGPAVVPAALSVEYLHVGSLV 90 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE----------AL 130 HDDV+D A RRG+ + +G +++ GD L+ F ++ + + A+ Sbjct: 91 HDDVIDGDATRRGRPSVVARYGTADAIVTGDALMLGMFGVLTDGAEEAGGLPPGRVLGAV 150 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L G+ + L +L + YL + KT LF AA +++ G + Sbjct: 151 RVFARAGVDLCRGQSMEGELRGDLGCGLDRYLTMSSLKTGALFRAACRGGAILGGGSPAQ 210 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + AL +Y +LG+AFQ+ DD+L Y + GK+ D +PT PV+L + Sbjct: 211 QHALTAYAEHLGLAFQMHDDLLPYTSDPRTTGKSALSDIAAARPTFPVLLCHAMAGAPGR 270 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 ++ + + + L+ ++ AL +A + +A L LP S L Sbjct: 271 ARLEAALGGALPAADALRTVHELLETTGALDAARDQATAQADRATSCLAELPRSRATAVL 330 Query: 311 MEVVDFCLQR 320 V D + R Sbjct: 331 AAVADLSVSR 340 >gi|189026971|emb|CAQ55981.1| polyprenyl synthetase [Aphanomyces euteiches] Length = 335 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 130/240 (54%), Gaps = 20/240 (8%) Query: 23 ICSDVEMIPDVVKYLIFS-GGKRLRPMLTLATALML---------------EYRGDNHVL 66 + SD ++ V KY + GGK++RP + L + EY + Sbjct: 62 LGSDHPVLEAVAKYFFENDGGKKIRPTMILLLSRAAEAERAADQSTFPKSPEYIAASQQR 121 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RRG + V+G++ S+L GDFLL+++ + +S Sbjct: 122 LAEITEMIHTASLLHDDVIDEADTRRGMQSVNKVFGSKMSILAGDFLLARSSICLARLRS 181 Query: 127 QEALEALSLVACTLAEGELRQLSLS-KNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIA 184 EA+E +S L +GE+ Q+ + KN ++ E YL KT L + + + S ++ Sbjct: 182 LEAVELMSTAIEHLVKGEVMQMRHADKNGAISPFEYYLRKNYYKTGSLMANSCKASLILG 241 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V + +YG +LG+AFQL+DDVLDY+G+ G+ + D + G T PV+LA ++ Sbjct: 242 EHSERVCELGFAYGRHLGLAFQLIDDVLDYKGQ--NTGQPMLADLKAGLTTAPVLLAQEK 299 >gi|256378414|ref|YP_003102074.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827] gi|255922717|gb|ACU38228.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827] Length = 557 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 91/303 (30%), Positives = 153/303 (50%), Gaps = 20/303 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D+ +Y + + GK LRP+L + A + + V A A+E++H +L+HDDV+DD +R Sbjct: 259 DISRYALLTPGKMLRPLLLASAAGAVGGDVERVVPAALAVEYLHVGSLVHDDVIDDDEVR 318 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF-----CM---VIETKSQEALEALSLVACTLAEG 143 RG+ + + +G +++VGD L+ + F C+ V + A A++ + G Sbjct: 319 RGQPSVQHRFGVPEAIVVGDALIFKTFSAVAACVELGVTAEAALGAARAIADAGVDVCRG 378 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + +L+ + DY+ V+ KT LF A +L+ G +A+ SY +LG+ Sbjct: 379 QALEGALAADPTHPLGDYVTVMALKTGALFRGACRAGALLGGGGPEAVEAVTSYAEHLGL 438 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQ+ DD+L Y + GK+ D RN +PT PV+LA +RGT ++ ++ G++ Sbjct: 439 AFQVHDDLLPYLSDSAVTGKSELSDLRNLRPTYPVLLAHERGTAGQRARIARVLS-GELP 497 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQK------AKDSLRCLPDSSWKKSLMEVVDFC 317 E +A+ +RE LVDT A + AK L LP + +L V D Sbjct: 498 AE---EAYPALRE--LLVDTGALAVATEHAEAEVALAKSCLSGLPGNEHTATLAGVADKS 552 Query: 318 LQR 320 + R Sbjct: 553 VAR 555 >gi|110669136|ref|YP_658947.1| multifunctional long-chain (E)-prenyl diphosphate synthase [Haloquadratum walsbyi DSM 16790] gi|109626883|emb|CAJ53352.1| probable multifunctional long-chain (E)-prenyl diphosphate synthase [Haloquadratum walsbyi DSM 16790] Length = 271 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 117/230 (50%), Gaps = 5/230 (2%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D ++ D V ++ SGGKR+RP +T+ ++ V A A+E +H A+L+ DD++ Sbjct: 14 DPAVLSDEVAHVALSGGKRVRPAVTILACEACGGAPEDAVDFAVAVELVHNASLVVDDII 73 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D S +RRG +A +G+ +++ D LL +AF ++ + + A S+V L EGE Sbjct: 74 DRSDVRRGTESAWSAFGHGPALIASDGLLGEAFALLAADEHATEIVAESMV--ELGEGEA 131 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 +L E +Y+ + + KT LF A+ EV ++ G Y +G+AF Sbjct: 132 TELVARPT---NEAEYMQLARRKTGALFRASAEVGAVAGGADPFTIDLFGEYAERVGVAF 188 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Q+ DDVLD + ++GK G+D +P+L + A E+ +S Sbjct: 189 QIRDDVLDATADATDLGKPTGQDAAMDRPSLIQVTALSDTEANERAHNES 238 >gi|217967661|ref|YP_002353167.1| Polyprenyl synthetase [Dictyoglomus turgidum DSM 6724] gi|217336760|gb|ACK42553.1| Polyprenyl synthetase [Dictyoglomus turgidum DSM 6724] Length = 343 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 4/213 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GKRLRP+ + L D+ + + AIEF+H +L+HDD+ D R G+ +W Sbjct: 54 GKRLRPLFCVLVNQTLGGFLDDALEIGSAIEFLHNFSLVHDDIQDRDEKRHGRWTVWKIW 113 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVACTLAEGELRQLSLSKNLDVT 157 G ++ VGD L + F ++ KS ++L+ L+ L EG+ +S K D++ Sbjct: 114 GEAQAINVGDLLFNMVFQVLTNLKSPVLLSKSLKELTETIRELIEGQYLDISFEKRKDIS 173 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 ++YL +I KTA LFS + + + A + + + + G + G+ FQ+ DD + G+ Sbjct: 174 LKEYLMMIDKKTAKLFSTSFYLGAFSATYKEDLSKIFQEIGRDFGLFFQIADDAIGIWGD 233 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + GKN D K T P++ + +++EK Sbjct: 234 PEKTGKNAFVDLWRKKKTYPILYLYSESSEKEK 266 >gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum] Length = 366 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 132/252 (52%), Gaps = 19/252 (7%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I D +I + ++Y + +GGKR+RPML LA ++ N + ACA+E IHT +L+HD Sbjct: 95 IVKDPPVIHEAMRYSLLAGGKRVRPMLCLAACELVGGDQSNAMPAACAVEMIHTMSLIHD 154 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLV 136 D+ +D+ LRRGK V+G +VL GD LL+ AF + + L A+ + Sbjct: 155 DLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIATATAGVSPSRILAAIGEL 214 Query: 137 ACT-----LAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 A + L G++ ++ + N +V + +++H+ KTA L A++ + +++ G + Sbjct: 215 AKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHI--HKTAALLEASVVLGAILGGGTDE 272 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L+ + +G+ FQ+VDD+LD +GK G+D K T P +L G ++ Sbjct: 273 EVEKLRIFARCIGLLFQVVDDILDVTKSSEVLGKTAGKDLAVDKTTYPKLL----GLEKA 328 Query: 250 KNFWKSTINDGK 261 K F D K Sbjct: 329 KEFAAELNRDAK 340 >gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta] Length = 361 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 127/227 (55%), Gaps = 14/227 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP+L +A ++ G + ACA+E IHT +L+HDD+ +D+ Sbjct: 98 IHESMRYSLLAGGKRVRPVLCIAACELVGGDGLTAMPAACAVEMIHTMSLMHDDLPCMDN 157 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETK---SQEALEALS-LVACTLAE 142 RRGK +V+G + +VL GD +LS AF M TK S L A+ L C +E Sbjct: 158 DDFRRGKPTNHMVYGEEIAVLGGDAMLSFAFEHMATATKGVSSDRILRAIGELAKCIGSE 217 Query: 143 GELRQLSL---SKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G + + S+ DV E +++H+ KTA L ++ + +++ G + + L+ + Sbjct: 218 GLVAGQVVDICSEGADVGLEHLEFIHL--HKTAALLEGSVVLGAILGGGSDGEIEKLRKF 275 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 ++G+ FQ+VDD+LD E+GK G+D + K T P +L ++ Sbjct: 276 ARSIGLLFQVVDDILDVTKSSEELGKTAGKDLVSDKTTYPKLLGIEK 322 >gi|154498045|ref|ZP_02036423.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC 29799] gi|150273035|gb|EDN00192.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC 29799] Length = 312 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 112/215 (52%), Gaps = 10/215 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D + Y + +GGKR+RP+L L T M + ACA+E +HT +L+HDD+ Sbjct: 52 DAMLYSLLAGGKRIRPVLALETCRMCGGDVTTALPFACAVEMVHTYSLIHDDLPCMDDDD 111 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-ALSLVACTLAEGELRQL 148 LRRG+ V+G T+VL GD LL+ AF + E + + E AL+ AC R + Sbjct: 112 LRRGQPTNHKVYGEATAVLAGDALLTAAFETIAEHGTSLSPERALAASACLGRAAGARGM 171 Query: 149 SLSKNLDVTEEDYLHVI-------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + LD+ E + + + KT L SAA E+ ++AG R A++ Y L Sbjct: 172 VGGQALDMAGEGHSLSLSELEELQRLKTGALISAATEIGCIVAGGGEKERAAVRRYAQLL 231 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQ+ DD+LD G+ +GK IG D N K T Sbjct: 232 GLAFQIRDDMLDVEGDEATLGKPIGSDAANEKVTF 266 >gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A] gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A] Length = 309 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 124/243 (51%), Gaps = 15/243 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L L T ++ + + ACA+E IHT +L+HDD+ + Sbjct: 44 EKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMALPTACALEMIHTMSLIHDDLPAM 103 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL---------SLV 136 D+ RRG++ V+G ++L GD LLS AF V +L L ++ Sbjct: 104 DNDDYRRGQLTNHKVYGEDIAILAGDALLSYAFEHVATQTHNVSLTNLVDVIARLGRTVG 163 Query: 137 ACTLAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 A L G++ L ++T + ++HV KT L ++ +++AG + L Sbjct: 164 AAGLVGGQVLDLESEGKSNITSDILKFIHV--HKTGALLETSVVSGAILAGANLEDIERL 221 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 Y N+G+AFQ++DD+LD E+GK G+D + K T P + + K+ + + Sbjct: 222 SHYAQNIGLAFQIIDDILDITSTQAELGKTAGKDKQAQKATYPSLWGLEESQKQAQILIE 281 Query: 255 STI 257 I Sbjct: 282 DAI 284 >gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325] gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325] Length = 306 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/262 (27%), Positives = 137/262 (52%), Gaps = 19/262 (7%) Query: 13 EKVNFLILKRICSDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--- 67 E++N + +++ + P + ++Y + GGKR+RP L AT ML G + + L Sbjct: 24 ERINAFLAQQLNLNTAPSPLIEAMRYGVLLGGKRIRPFLVYATGRML---GADLIQLDYA 80 Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A +E IH +L+HDD+ +D+ +LRRG+ + + T++L GD L + AF ++ + Sbjct: 81 AAGLEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDEATAILAGDALQAFAFEILTQAP 140 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALE 178 + A + L+LV+ + + L ++LD+ E + + ++KT L +AAL+ Sbjct: 141 ALSAEQKLALVSTLAQASGAKGMCLGQSLDLISEQKQISLAELEQIHRNKTGALLTAALQ 200 Query: 179 VSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + + + ++ Q L+ Y +G+AFQ+ DD+LD GE +GK +G D K T Sbjct: 201 LGFICSPHFGDKTLAQQLQRYSRAIGLAFQVQDDILDIEGESEVLGKTVGSDLMADKSTY 260 Query: 237 PVILAFQRGTKREKNFWKSTIN 258 P +L ++ + ++ I+ Sbjct: 261 PKLLGLDGAKQKAQELYREAIS 282 >gi|78777056|ref|YP_393371.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251] gi|78497596|gb|ABB44136.1| Polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251] Length = 295 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 8/206 (3%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GGKRLR L L A LL +E IH A+LLHDDV+D++ LRRG + Sbjct: 27 LQGGKRLRAGLILKIAPTCT----TAPLLGAIVELIHAASLLHDDVIDEATLRRGVASIN 82 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 G++T+V++GD L S+AF ++ +E + +S L++GE+ + ++ + E Sbjct: 83 ATDGSKTAVMLGDILYSKAFSELV-AFDKEIAKVISSSVTALSKGEMMDVKMASAFNSDE 141 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 E YL ++ KTA L A ++L+A ++++ ++ YG NLG++FQ++DD+LD + Sbjct: 142 ERYLEMLYLKTATLIEACAHAAALLAQ-KDALSHSI--YGKNLGLSFQIIDDILDITSDE 198 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQR 244 +GK DF GK TLP I +Q Sbjct: 199 ATLGKPAMNDFVEGKCTLPYIYLYQH 224 >gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis] Length = 383 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 85/274 (31%), Positives = 142/274 (51%), Gaps = 30/274 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKR+RP+L +A ++ + + ACA+E IHT +L+HDD+ + Sbjct: 116 EKIHEAMRYSLLAGGKRVRPILCIAACELVGGSEELAMPTACAMEIIHTMSLIHDDLPPM 175 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVAC----- 138 D+ LRRGK V+G T+VL GD LLS AF V +K+ E+ L +V+ Sbjct: 176 DNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKTVESDRVLRVVSELGRAI 235 Query: 139 ---TLAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 +A G++ ++ N V E +++H+ KTAVL ++ ++I G + + Sbjct: 236 GSEGVAGGQVADITSQGNPSVGLETLEWIHI--HKTAVLLECSVASGAIIGGASDDEIER 293 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 ++ Y +G+ FQ+VDD+LD E+GK +D + K T P ++ G ++ K F Sbjct: 294 VRKYARCVGLLFQVVDDILDVTKSSEELGKTAAKDLLSDKATYPKLM----GLEKAKEFA 349 Query: 254 KSTINDGK--ISVENLKKA--------FIIMREN 277 + K +S N KA +I R+N Sbjct: 350 DELLGKAKEELSFFNPTKAAPLLGLADYIAQRQN 383 >gi|327439759|dbj|BAK16124.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris StLB046] Length = 294 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 77/268 (28%), Positives = 138/268 (51%), Gaps = 14/268 (5%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K D + +E + +++ I + + ++ Y + +GGKR+RP+ +A M Sbjct: 5 LKQFIDHNIPQLETTMYELVESIKAPAHLKESML-YSLKAGGKRIRPLFVVAVCEMYNQS 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + + A+E IHT +L+HDD+ +DD LRRGK +V+G + L GD L + AF Sbjct: 64 LETSYTVGSAVEMIHTYSLIHDDLPSMDDDELRRGKPTNHVVYGEALATLAGDALNTLAF 123 Query: 119 CMVIE------TKSQEALEALSLVACT--LAEGELRQLSLSKNL-DVTEEDYLHVIKSKT 169 ++ K E + LS+ A T + G++ + K L ++ E + +HV +KT Sbjct: 124 GVIARLNNLSAEKRIELVNLLSVAAGTEGMVGGQVLDMDGEKRLLNLKELETVHV--NKT 181 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 L ++E +++A S R+AL Y ++G+AFQ+ DD+LD G ++GK G+D Sbjct: 182 GALLRFSIEAGAVLANASISDREALVEYAHHIGLAFQIQDDILDIEGTSEQLGKTAGKDV 241 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTI 257 + K T P +L + ++ ++ I Sbjct: 242 ASDKSTYPALLTLEGAKQKLDEHYELAI 269 >gi|218200608|gb|EEC83035.1| hypothetical protein OsI_28120 [Oryza sativa Indica Group] gi|222640053|gb|EEE68185.1| hypothetical protein OsJ_26326 [Oryza sativa Japonica Group] Length = 399 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 120/244 (49%), Gaps = 6/244 (2%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + ++ LA E IH +L+HDDV+DD+ RRG + V G + +VL GDFLLS+AF Sbjct: 137 ERYMRLAEITELIHVTSLIHDDVLDDANTRRGMDSLNCVMGKKLAVLAGDFLLSKAFSTA 196 Query: 122 -IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + E + L+ L GE Q+ ++ + + YL KTA L S + + Sbjct: 197 AVSLDNAEVILLLATAVNNLVTGEFMQMRITPIQRCSMDYYLQKSYYKTAALISNSCKAV 256 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG V YG +LGIA+QL+DD+LD+ G +GK D G T P++ Sbjct: 257 AVLAGQTAEVATLAYQYGKHLGIAYQLIDDILDFTGTSASLGKGSLSDIHQGIVTAPILF 316 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + E + + G N+ A + ++ + T A + + A D++ Sbjct: 317 AME-----EYPQLRVIVEQGFDDPSNVDAALAYLARSKGIERTRLLAAEHAKLAADAIDA 371 Query: 301 LPDS 304 LP+S Sbjct: 372 LPES 375 >gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC 6301] gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942] gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC 6301] gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942] Length = 301 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 116/228 (50%), Gaps = 11/228 (4%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV- 84 D +I + ++Y + + GKRLRP+L LA+ + + ACA+E +HT +L+HDD+ Sbjct: 34 DPPLIYESMRYSLLAEGKRLRPILCLASCELAGGTAAIALPTACALEMVHTMSLIHDDLP 93 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVAC---- 138 +D+ RRG+ V+G ++L GD LL+ AF + T A L ++A Sbjct: 94 SMDNDDFRRGRPTNHKVYGEDIAILAGDALLTYAFEAIARHTPEVPADRVLKVIAALARA 153 Query: 139 ----TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L G++ L DV E ++ KT L ++ +++AG +++ L Sbjct: 154 VGAEGLVGGQVVDLQSEGRDDVNLETLHYIHTHKTGALLEVSVVSGAILAGASEELQEQL 213 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++Y +G+AFQ++DD+LD E+GK G+D K T P +L Sbjct: 214 RTYAQKIGLAFQVIDDILDITATAEELGKTAGKDLAAKKATYPSLLGL 261 >gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f. nagariensis] gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f. nagariensis] Length = 312 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 30/236 (12%) Query: 31 PDVV----KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV 84 PD + +Y + +GGKR+RP L LA ++ GD L ACA+E IHT +L+HDD+ Sbjct: 46 PDTLYESMRYSLLAGGKRVRPALCLAACELIG--GDVQAALPAACAMEMIHTMSLIHDDL 103 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVA---- 137 +D+ RRG+ V+G ++L GD LL+ AF + TK A L ++ Sbjct: 104 PSMDNDDFRRGRPTNHKVYGEDIAILSGDALLTYAFEHIARATKGVSAERVLRVIMELGR 163 Query: 138 CTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQN 188 T AEG L + +D+ ED Y+H+ KTA L A++ +++ G Sbjct: 164 ATGAEG----LVAGQVVDIQSEDKEVGLDVLKYIHL--HKTAALLEASVVCGAIVGGADE 217 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + + L+ Y N+G+AFQ+VDD+LD ++GK +D K T P +L ++ Sbjct: 218 ATIEKLRKYSRNIGLAFQVVDDILDVTQTTEQLGKTAAKDLAVNKTTYPKLLGLEK 273 >gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107] gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107] Length = 296 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 127/239 (53%), Gaps = 14/239 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + D ++Y + +GGKRLRP+L LA + + V A A+E IHT +L+HDD+ Sbjct: 32 ESLRDAMRYSLLAGGKRLRPILCLAACELAGGDAKHAVPTAVALEMIHTMSLIHDDLPAM 91 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEA------LEALSLVAC 138 +RRG+ V+G ++L GD LL++AF MV + + A + LSLVA Sbjct: 92 DDDDVRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSPGVPADQLLKVVGELSLVAG 151 Query: 139 T--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L S K +D+ +Y+H+ KT L SA + +LI +++ AL+ Sbjct: 152 APGLVGGQVVDLESEGKQVDLETLEYIHL--HKTGALLSACVITGALIGNADDTLITALR 209 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 +Y +G+AFQ++DD+LD +GK G+D K T P +L + KR + + Sbjct: 210 TYARGIGLAFQIIDDILDITASSEVLGKTAGKDLLADKTTYPKLLGLEESRKRADDLVR 268 >gi|28377915|ref|NP_784807.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum WCFS1] gi|254556099|ref|YP_003062516.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum JDM1] gi|308180094|ref|YP_003924222.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270749|emb|CAD63654.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum WCFS1] gi|254045026|gb|ACT61819.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum JDM1] gi|308045585|gb|ADN98128.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum subsp. plantarum ST-III] Length = 325 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 77/243 (31%), Positives = 126/243 (51%), Gaps = 8/243 (3%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 E L K++ + + + D I D V L+ +GGK LRP L ++ D++ Sbjct: 9 ESLVAKELAALKPYLATNVKIDNAAINDRVHDLLAAGGKFLRPGFFY---LFSQFGPDHN 65 Query: 65 VLL----ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 A A+E +H ATL+HDDV+D+S RR +G + ++ GD L + F Sbjct: 66 TARLRAGAAAMELLHVATLIHDDVIDESPERRHVTTIHQDYGQRNAIYAGDLLFTCYFDQ 125 Query: 121 V-IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 V I K+ + ++ + + +GEL Q++ + + T +DYL + + KTA LFS + E Sbjct: 126 VLIAAKTADDVKINTAAMRAILQGELDQMAHNFDPTTTVDDYLAIARGKTARLFSLSCEQ 185 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + AG SV + + G +G+A+Q++DDVLDY G+ K + D R+G +LP+I Sbjct: 186 GAHFAGADASVVKLAQQIGERMGLAYQMLDDVLDYAGDEALTQKPVLNDLRDGVYSLPLI 245 Query: 240 LAF 242 A Sbjct: 246 YAL 248 >gi|328877029|gb|EGG25392.1| trans-prenyltransferase [Dictyostelium fasciculatum] Length = 485 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 9/206 (4%) Query: 42 GKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GKR+RP + L + L + + + + LA +E IHTATL+HDDV+D++ RR Sbjct: 207 GKRIRPTIILLLSRCLLQQKNITEPIASQIKLAEIVEMIHTATLVHDDVIDEATTRRDVP 266 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + + N+ S+L GD+LL++A ++ + ++ + E +S L EGE Q+ K+ + Sbjct: 267 SVNKSFSNKLSILCGDYLLARASVLLSQLRNPDVSELISTSLADLVEGEFMQV---KSNE 323 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 + E YL KTA L S + + ++L+ G +G NLG+AFQL+DD+LDY Sbjct: 324 SSFEQYLRKTYLKTASLISNSCKATALLGGEDAHTANLAFEFGKNLGLAFQLIDDLLDYT 383 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILA 241 +GK D G T PV+ A Sbjct: 384 STTEVLGKQAFADLAQGLATAPVLYA 409 >gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies] Length = 383 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 85/274 (31%), Positives = 142/274 (51%), Gaps = 30/274 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKR+RP+L +A ++ + + ACA+E IHT +L+HDD+ + Sbjct: 116 EKIHEAMRYSLLAGGKRVRPILCIAACELVGGSEELAMPTACAMEIIHTMSLIHDDLPPM 175 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVAC----- 138 D+ LRRGK V+G T+VL GD LLS AF V +K+ E+ L +V+ Sbjct: 176 DNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKTVESDRVLRVVSELGRAI 235 Query: 139 ---TLAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 +A G++ ++ N V E +++H+ KTAVL ++ ++I G + + Sbjct: 236 GSEGVAGGQVADITSQGNPSVGLETLEWIHI--HKTAVLLECSVASGAIIGGASDDEIER 293 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 ++ Y +G+ FQ+VDD+LD E+GK +D + K T P ++ G ++ K F Sbjct: 294 VRKYARCVGLLFQVVDDILDVTKSSEELGKTAAKDLLSDKATYPKLM----GLEKAKEFA 349 Query: 254 KSTINDGK--ISVENLKKA--------FIIMREN 277 + K +S N KA +I R+N Sbjct: 350 DELLGKAKEELSFFNPTKAAPLLGLADYIAQRQN 383 >gi|290968311|ref|ZP_06559853.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L] gi|290781670|gb|EFD94256.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L] Length = 295 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 16/216 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y + +GGKR+RP+L LA L ++ +ACA+E +H+ +L+HDD+ +D+ L Sbjct: 36 AMNYSLLAGGKRIRPILFLAALEALGKESSVYMDVACALECVHSYSLIHDDLPAMDNDDL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT----------- 139 RRGK V+G ++L GD LL+ AF ++ Q +A + AC Sbjct: 96 RRGKPTNHRVFGEGMAILAGDGLLTFAFELLAR---QRVADAEKIGACIRVLAHAAGPAG 152 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + G+ L + D+ E + + KT V+F A + ++ ++A +VRQ L++Y Sbjct: 153 MVGGQAYDLLSEGHGDIGTEGLKLMHRGKTGVIFEAVMSMAGILAAAPAAVRQVLQAYAE 212 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 LG+ FQ+ DD+LD G E+GK +G D +N K T Sbjct: 213 QLGLTFQITDDILDACGTEAELGKPVGSDVKNNKAT 248 >gi|315644722|ref|ZP_07897852.1| Polyprenyl synthetase [Paenibacillus vortex V453] gi|315279872|gb|EFU43172.1| Polyprenyl synthetase [Paenibacillus vortex V453] Length = 334 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 30/257 (11%) Query: 11 DMEKVNFLILKRICSDVEMIP-----DVVKYLIFSGGKRLRPMLTLATALMLEYR----G 61 D+ + L+ + + SD ++ P + V LI SGGKRLRP++ +ML R G Sbjct: 10 DLASFDRLLREVVISDRDLSPPSVVLESVVNLINSGGKRLRPLM-----VMLGSRFGVSG 64 Query: 62 DNHVLLACAI--EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 ++ A+ E++H A+L+HDD++D S +RRG QT+V +G++++++A Sbjct: 65 HESAVMKTAVLLEYLHMASLVHDDIIDQSDMRRGMPTLHETTDVQTAVHIGNYMIARAIE 124 Query: 120 MVIETKSQEA--------------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 +E+ L L+ + L GE QL N D+T E YL Sbjct: 125 WAAGHPGEESDGASEAVSEEDAYRLAELAALVTELCMGEYDQLHHRFNYDLTMEQYLEKT 184 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 + KTA+L + L+ + A + L +G LG+AFQ+ DD+LD+ +GK Sbjct: 185 RCKTALLMAHCLKAGAEAAKADARTAELLFQFGEALGMAFQIRDDLLDFTQSKETIGKPA 244 Query: 226 GEDFRNGKPTLPVILAF 242 G D RNG TLPVI A Sbjct: 245 GADLRNGNITLPVIYAL 261 >gi|254577169|ref|XP_002494571.1| ZYRO0A04620p [Zygosaccharomyces rouxii] gi|238937460|emb|CAR25638.1| ZYRO0A04620p [Zygosaccharomyces rouxii] Length = 468 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 88/303 (29%), Positives = 136/303 (44%), Gaps = 60/303 (19%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + + N+ +VL GDFLL +A + ++ Sbjct: 175 LAEIVEMIHTASLLHDDVIDHSDTRRGRASGNVAFTNKMAVLAGDFLLGRATVAISRLRN 234 Query: 127 QEALEALSLVACTLAEGELRQL-------------------SLSKNLDVTEED------- 160 E +E +S L EGE QL + SK L+ D Sbjct: 235 PEVVELMSNSIANLVEGEFMQLKNTAVEDISIINQGNKPLPAASKKLNNEVHDYRVPRAV 294 Query: 161 ----------------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 YLH KTA L S + +++++GV +V +G ++GI Sbjct: 295 GEGISHDQMIETAFDYYLHKTYLKTAALISKSSRAAAILSGVDRTVVDQCYEFGKDIGIC 354 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQLVDD+LD+ ++GK G D G T PV+ A WK+ + G + Sbjct: 355 FQLVDDMLDFTVSAKDLGKPAGADLELGIATAPVLYA-----------WKADPSLGPLIQ 403 Query: 265 ENLKKAFIIMRENRALVD------TEYRAYSYGQKAKDSLR-CLPDSSWKKSLMEVVDFC 317 N + + + A+ + T+ A Y +A +LR LP+S + +L + + Sbjct: 404 RNFSQPGDVEQTAEAVANSNGVFKTKKLAEKYRDQALQNLRKALPESDARSALEFLTNSI 463 Query: 318 LQR 320 L R Sbjct: 464 LTR 466 >gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 372 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 124/230 (53%), Gaps = 14/230 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I D ++Y + +GGKR+RP+L +A ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 109 IHDAMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAMEMIHTMSLIHDDLPCMDN 168 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT---- 139 LRRGK ++G +T++L GD LLS +F V + + A++ + Sbjct: 169 DDLRRGKPTNHKMFGEETAILAGDALLSFSFEHVARSTKNVSPDRVVRAIAELGSAVGSE 228 Query: 140 -LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L G++ + S K++ V++ +Y+H+ KTA L A++ +++ G + + ++ Y Sbjct: 229 GLVAGQIVDIDSEGKDVSVSDLEYIHI--HKTAKLLEASVVCGAILGGADDESVERVRKY 286 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +G+ FQ+VDD+LD E+GK G+D K T P ++ K Sbjct: 287 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLITDKATYPKLMGIDEARK 336 >gi|260799431|ref|XP_002594699.1| hypothetical protein BRAFLDRAFT_240460 [Branchiostoma floridae] gi|229279935|gb|EEN50710.1| hypothetical protein BRAFLDRAFT_240460 [Branchiostoma floridae] Length = 328 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 9/225 (4%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR---GDNHVLLACA------IEFIHTATL 79 ++ D+ Y GK RPM+ L + + +N + L E IHTA+L Sbjct: 31 LLRDMSHYYFDGQGKAFRPMVVLLMSRACNFHHGAAENSLALPSQRRISMIAEMIHTASL 90 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 +HDDV+D++ RRGK + G + ++L GD++L+ + + +++ + LS V Sbjct: 91 VHDDVIDEADTRRGKACVSYLHGQRKAILTGDYILTVSSMALAAIGNKDVVILLSQVIED 150 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 L GE QL ++ D YL KTA L + + ++++G V++ YG Sbjct: 151 LVRGEFMQLGTKEDEDERFAHYLKKTFKKTASLLAHSCRAVAVLSGSSKDVQEVAYQYGK 210 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NLGIAFQLVDD+LD+ MGK D + G T PV+ A ++ Sbjct: 211 NLGIAFQLVDDMLDFMSTEELMGKPTAADLKLGLATAPVLFAAEK 255 >gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073] gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073] Length = 297 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 12/222 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y +F+GGKRLRP+L LA + + + + ACA+EFIHT +L+HDD+ +D+ Sbjct: 38 AMHYSLFAGGKRLRPILVLAAGEAVGSQPEPLLPAACAVEFIHTYSLIHDDLPAMDNDDY 97 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE---------ALSLVACTLA 141 RRG+ V+G ++L GD LL+ AF ++ + E A S + L Sbjct: 98 RRGRPTCHKVYGEAIALLAGDALLTLAFEVLSRIPATIPPERILRATRELAASAGSQGLI 157 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G++ + ++ VT E ++ KT L A L + ++ G L YG L Sbjct: 158 GGQVVDME-AEGQPVTLEKVNYIHNHKTGSLIRACLRLGGILGGAGEEQLALLTRYGEAL 216 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+AFQ+ DD+LD G+ ++ GK G D GK T P L + Sbjct: 217 GLAFQITDDILDITGDFSQTGKQGGVDAARGKATYPACLGVE 258 >gi|322514115|ref|ZP_08067184.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976] gi|322120026|gb|EFX92005.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976] Length = 297 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 149/299 (49%), Gaps = 36/299 (12%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 DLT +FL K P D + Y + GGKR+RP L AT ML + Sbjct: 8 DLTAIQQRINDFLATKLQAHQAYGSPLIDAMSYAVLLGGKRVRPFLIYATGRMLGVSLEQ 67 Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 A A+E IH +L+HDD+ +DD LRRGK + + T++L GD L S AF ++ Sbjct: 68 LDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDETTAILAGDALQSFAFELI 127 Query: 122 IE----TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY------LHVI-KSKTA 170 + T SQ+ + +L A G + L ++LD+ ED L +I ++KT Sbjct: 128 AQDESLTDSQKVWQIQALAQAAGARG----MCLGQSLDLLAEDKAVNLAELELIHRNKTG 183 Query: 171 VLFSAALEVSSLIAGVQNS-------VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 L V+S++ G +S V+Q L+ Y +G+AFQ+ DD+LD GE +++GK Sbjct: 184 ALI-----VASVLMGFNSSAHSQNLAVKQPLERYAQAIGLAFQVQDDILDVIGETDKIGK 238 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND-GKISVEN--LKK--AFIIMREN 277 +G D K T P +L + ++ ++ ++ ++ K+ + LK+ FI+ RE+ Sbjct: 239 TVGSDENLHKSTYPKLLGLEGAKQKAQDLYQLALDSLAKLPFDTTALKELADFIVKRES 297 >gi|260799425|ref|XP_002594697.1| hypothetical protein BRAFLDRAFT_240454 [Branchiostoma floridae] gi|229279933|gb|EEN50708.1| hypothetical protein BRAFLDRAFT_240454 [Branchiostoma floridae] Length = 328 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 9/222 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYR---GDNHVLLACA------IEFIHTATLLHD 82 D+ Y GK RPM+ L + + +N + L E IHTA+L+HD Sbjct: 34 DMSHYYFDGQGKAFRPMVVLLMSRACNFHNGAAENSLALPSQRRISMIAEMIHTASLVHD 93 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 DV+D++ RRGK + G + ++L GD++L+ + + +++ + LS V L Sbjct: 94 DVIDEADTRRGKACVSYLHGQRKAILTGDYILTVSSMALAAIGNKDVVILLSQVIEDLVR 153 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE QL ++ D YL KTA L + + ++++G V++ YG NLG Sbjct: 154 GEFMQLGTKEDEDERFAHYLKKTFKKTASLLAHSCRAVAVLSGSSKDVQEVAYQYGKNLG 213 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 IAFQLVDD+LD+ MGK D + G T PV+ A ++ Sbjct: 214 IAFQLVDDMLDFMSTEELMGKPTAADLKLGLATAPVLFAAEK 255 >gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies] gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis] Length = 382 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 128/234 (54%), Gaps = 16/234 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKR+RP+L +A ++ + ACA+E IHT +L+HDD+ + Sbjct: 115 EKIHEAMRYSLLAGGKRVRPVLCIAACELVGGTEKLAMPTACAMEMIHTMSLIHDDLPCM 174 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTL 140 D+ RRGK V+G T+VL GD LLS AF + + S+ L +S + T+ Sbjct: 175 DNDDFRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKSVGSDRILRVVSELGRTI 234 Query: 141 AE-----GELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 G++ ++ N +D+ +++H+ KTAVL ++ ++I+G + + Sbjct: 235 GSQGLVGGQVADITSEGNASVDLDTLEWIHI--HKTAVLLECSVVCGAIISGASENEIER 292 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +K Y ++G+ FQ+VDD+LD E+GK G+D + K T P ++ ++ + Sbjct: 293 VKRYARSVGLLFQVVDDILDVTKSSKELGKTAGKDLISDKATYPKLMGLEKAKQ 346 >gi|333023935|ref|ZP_08451999.1| PlaT4 [Streptomyces sp. Tu6071] gi|81250709|gb|ABB69754.1| PlaT4 [Streptomyces sp. Tu6071] gi|332743787|gb|EGJ74228.1| PlaT4 [Streptomyces sp. Tu6071] Length = 359 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 19/282 (6%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIF--------------SGGKRLRPMLTLAT 53 T ++E+VN ++ + V D ++ ++ + GK +R LT+ T Sbjct: 24 TPPEIERVNRMVTPILHQAVTRFDDRLRPMVAHHFGWPSSDLPTATTSGKMVRATLTVLT 83 Query: 54 A--LMLEYRGDNHVLLA-CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110 + + V A A+E IH +L+HDDV+D RRG+ A +G ++L G Sbjct: 84 GECFTTDAEAISRVTAAGAAVEMIHNFSLIHDDVMDGDRERRGRPAVWHEYGIPAAILTG 143 Query: 111 DFLLSQAFCMV--IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168 D LL+QA M+ A L+ LA G++ LSL + + ++ L V K Sbjct: 144 DLLLAQAPLMLDGPWAADPRATRLLAEAVARLAAGQMADLSLEGRPEASPDEALAVAADK 203 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 T L + A E+ +L+AG + +G+ LG+AFQ+ DD+L G+ GK +G D Sbjct: 204 TGALLACACELGALLAGASEEATRRFSRFGLRLGLAFQIADDILGIWGDPRRTGKPVGSD 263 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 R+ K + PV A T + ++G + + ++A Sbjct: 264 LRSRKGSFPVTSALASDTPEAAELARFYADEGPVGEDEARRA 305 >gi|294101849|ref|YP_003553707.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261] gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261] Length = 300 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 78/257 (30%), Positives = 131/257 (50%), Gaps = 26/257 (10%) Query: 3 MLEDLTLKDMEKVNFLI---LKRICSD-VEMIP----DVVKYLIFSGGKRLRPMLTLATA 54 M+ D+ +++EK L +CS E IP + + Y + +GGKRLRP+L + A Sbjct: 1 MMNDMVKRELEKNRVWFEDHLNSLCSSRPENIPPRLWESMTYSLQAGGKRLRPILCVKAA 60 Query: 55 LMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDF 112 + + + +A A+E +HTA+L+HDD+ +D+ +LRRGK +++G+ ++L GD Sbjct: 61 ESVGGEKEKVLPMALALEMVHTASLIHDDLPAMDNDSLRRGKPTNHMIYGDALAILAGDA 120 Query: 113 LLSQAFCMVIE------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL---- 162 LL+ AF ++ ++ALS+ A + + + LD + Sbjct: 121 LLAWAFEYSLKGLMDRGVPPSSIVQALSIFAQAVGP---SGICGGQVLDTDPASFTSSLS 177 Query: 163 ---HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 ++ KTAVL A+L +++ G + A YG +LG+AFQ+VDD+LD Sbjct: 178 FVANIALQKTAVLLQASLVTGAILGGASQEIAGAFGKYGRHLGLAFQIVDDILDVTSSPE 237 Query: 220 EMGKNIGEDFRNGKPTL 236 E+GK G+D K T Sbjct: 238 ELGKTPGKDAAQQKITF 254 >gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335] gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335] Length = 307 Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 16/247 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E I + ++Y + +GGKRLRP+L LAT ML + + ACA+E +HT +L+HDD+ Sbjct: 39 EQIYEAMRYSLLAGGKRLRPILCLATCEMLGASANIAMPTACALEMVHTMSLIHDDLPAM 98 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVAC-- 138 RRGK+ V+G +VL GD LL+ AF + Q + L +VA Sbjct: 99 DDDDYRRGKLTNHKVYGEGVAVLAGDALLTYAFEHIATQTPQGSDGADPQHILKVVAQLG 158 Query: 139 ------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L G++ L+ L V EE + KTA L ++ +++AG +V Sbjct: 159 RAVGAEGLVGGQVVDLASEGTL-VDEETLTFIHMHKTAALLEVSVTSGAMLAGASEAVVD 217 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+ Y +G+AFQ+VDDVLD +GK+IG+D K T P + + ++ + Sbjct: 218 RLRRYAQRIGLAFQIVDDVLDITSTPETLGKSIGKDIAAQKATYPSLWGLEESQRKAEQL 277 Query: 253 WKSTIND 259 I++ Sbjct: 278 VADAISE 284 >gi|255994613|ref|ZP_05427748.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989] gi|255993326|gb|EEU03415.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989] Length = 297 Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 127/229 (55%), Gaps = 23/229 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDD 87 + ++Y +++GGKR+RP+L + A + GD +L A AIEFIHT +L+HDD+ +DD Sbjct: 32 EAMEYSLYAGGKRVRPVLLMEAARAV--GGDPGSVLDYAAAIEFIHTYSLIHDDLPALDD 89 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET------------KSQEALEALSL 135 RRGK V+G ++L GD L + A+ +++ K +A + + Sbjct: 90 DEYRRGKKTNHKVFGEAMAILAGDGLQALAYEVMLSCIAKSDNMGDEILKKIKAANEIVM 149 Query: 136 VACT--LAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 A T + G++ ++ + D +T + +H + KT L +AA+ V +++AG Sbjct: 150 AAGTEAMVSGQVMDINSCSDKDSLTMLEKMH--RMKTGALITAAVVVGAILAGADERQVA 207 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 A + YG N+G+AFQ+VDD LD G+ MGK+I D RN K T ++L+ Sbjct: 208 AFRKYGENIGLAFQMVDDKLDVSGDSKNMGKDINADERNEKITYTILLS 256 >gi|291519198|emb|CBK74419.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens 16/4] Length = 305 Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 81/258 (31%), Positives = 127/258 (49%), Gaps = 17/258 (6%) Query: 19 ILKRICSDVE----MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 ++ R DVE I D ++Y + +GGKRLRP+L T + GD AIE I Sbjct: 25 VVIRFLPDVEGLQSSIFDAMQYSVTAGGKRLRPILMNETFTLFGGEGDVIEPFMAAIELI 84 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-------- 124 HT +L+HDD+ +D+ +LRRGK V+G VL GD LL+ AF + Sbjct: 85 HTYSLVHDDLPAMDNDSLRRGKPTTHAVYGEAMGVLAGDALLNYAFETALNAYDADIDTV 144 Query: 125 KSQEALEALSLVACTLA--EGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + EA+ L+ A G++ + S K L++T+E + + KT L AA+ + + Sbjct: 145 RVTEAMRILARKAGVFGMIGGQVVDVESEKKQLEMTKEKIDFIYELKTGALIEAAMMIGA 204 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++AG +++ +G+AFQ+ DD+LD G+ +GK IG D RN K T Sbjct: 205 VLAGATEQQVTTVENVAKKIGLAFQIQDDILDVIGDEATIGKPIGSDERNEKCTFVTFAG 264 Query: 242 FQRGTKREKNFWKSTIND 259 ++ + K I + Sbjct: 265 IEKSKEEVKRLTDEAIEE 282 >gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196] gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196] Length = 297 Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 28/271 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + GGKR+RP+L A + + + + A A+E IH +L+HDD+ + Sbjct: 32 ERLHEAMRYTVLGGGKRVRPLLAFAAGELNKANEERVTIAAIAVELIHVYSLVHDDLPCM 91 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQ-EALEALSLVAC 138 DD LRRGK + +G ++L GD L S AF ++ E K Q E + L+ A Sbjct: 92 DDDVLRRGKPTCHIEYGEAIALLTGDSLQSLAFQLLAEYSLADTPKMQLEMIRRLAQAAG 151 Query: 139 T--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QAL 194 + +A G+ L S+ + L + E +++H+ KT L AA+ + + + + AL Sbjct: 152 SRGMAGGQAVDLASVGRTLSLPELEFMHI--HKTGALIRAAVMLGAYCGSRLDEAQLAAL 209 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + +G+AFQ+VDDVLD +GK G+D N KPT IL G+KR + + Sbjct: 210 DHFAKCIGLAFQVVDDVLDAEATTAALGKTAGKDAENNKPTYVSIL----GSKRARELAE 265 Query: 255 STINDGKISVENLKKA---------FIIMRE 276 + S+E + A FII RE Sbjct: 266 ELRREAYASLEMFEAAAGRLRQVTDFIIHRE 296 >gi|313240927|emb|CBY33211.1| unnamed protein product [Oikopleura dioica] Length = 344 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 156/311 (50%), Gaps = 24/311 (7%) Query: 27 VEMIPD--------VVKYLIFSGGKRLRPMLT--LATAL--MLEYRGDNHVLLACAI--E 72 V MIP+ + Y GK +RP++ +A AL +E N L A+ E Sbjct: 39 VAMIPEDTTDEIYPMACYYFDGSGKSIRPLIVGRIAEALGGCIE---TNEKLQKVAMIAE 95 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 IHT +L+HDDV+D S RRGK +A WG +V+ G++++S + ++ +S E + Sbjct: 96 MIHTGSLVHDDVIDKSEERRGKASANSKWGVTKAVMAGNYIISYSSQLLASLESDEVTKI 155 Query: 133 LSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +S + L GEL QL S++ N + + Y+ KTA L + + E +++ V+ Sbjct: 156 ISRIIEDLIYGELCQLESVNSNHEHRYKQYIKKTYLKTASLIANSAEAVAVLTDQPAHVQ 215 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 QA ++G LGIAFQ+ DD LD+ + ++GK D + G T PV+ A Q E Sbjct: 216 QAAFNFGKYLGIAFQIQDDRLDFLADSEQLGKPACADLKLGLSTAPVLYACQ---THEGE 272 Query: 252 FWKSTINDGKISVENLKKAF-IIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSSWKKS 309 W + S +++KA II + + AL+ T A +Y ++A + L D K++ Sbjct: 273 MW-PLMKRRFTSPGDVQKAHNIITKRSDALLKTRLLAENYAKRAAREIDMLTADPVLKEN 331 Query: 310 LMEVVDFCLQR 320 L+E+ R Sbjct: 332 LLELTKMVTNR 342 >gi|329568427|gb|EGG50234.1| polyprenyl synthetase [Enterococcus faecalis TX1467] Length = 326 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 9/295 (3%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLL--ACAIEFI 74 LI + + + E I + + L SGGK LRP L L E + + LL A ++E + Sbjct: 21 LIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEIL 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEAL 133 H ATL+HDD++DDS LRRG V + +G +V GD L ++ F ++ + E ++ Sbjct: 81 HMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNGSEFMKIN 140 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L GEL Q+S + ++ YL + KTA LFS + + V++ Sbjct: 141 AQGMKRLLLGELGQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRL 200 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 K G ++GIAFQ+ ++LDY + + K ED G TLP++ A+Q + + Sbjct: 201 AKRIGRHIGIAFQVYANILDYTADTETLKKPALEDLSQGVYTLPLLFAYQAA----PDVF 256 Query: 254 KSTINDGK-ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ G+ I++E + ++ + + + + A KA ++ LPD + K Sbjct: 257 GPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAK 311 >gi|145346108|ref|XP_001417536.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577763|gb|ABO95829.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 332 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 80/250 (32%), Positives = 121/250 (48%), Gaps = 27/250 (10%) Query: 21 KRICSDVEMIPDVVKYLIFSG--GKRLRPML-----------TLATALMLEYRGDNHVL- 66 + + SD+ + +Y G GKR+RP + + +A +R +H Sbjct: 3 RAVTSDIPALSTASEYFFKLGAEGKRVRPTVLMLMASAMTNGVMTSAAQGGWRETDHAPA 62 Query: 67 -------------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113 LA E IH A+LLHDDV+D++A RRG A L GN+ ++L GDFL Sbjct: 63 HQAPADVRRRQQRLAEIAEMIHVASLLHDDVLDNAATRRGLRALNLEVGNKLAILAGDFL 122 Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173 L++A + ++ E +E LS V L GE+ Q++ + + Y+ KTA L Sbjct: 123 LARASVTLASLRNTEVIELLSRVLEHLVAGEVMQMTAKPESLSSMDHYVKKTYYKTASLI 182 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + + + +L+ G Q YG NLG+AFQ DDVLD+ G + +GK D + G Sbjct: 183 ANSSKAIALLGGHGEESAQLAYDYGKNLGLAFQFQDDVLDFIGSESLLGKPTLGDLKEGI 242 Query: 234 PTLPVILAFQ 243 T PV+ A Q Sbjct: 243 ATAPVLFAVQ 252 >gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1] gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1] Length = 297 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/235 (32%), Positives = 114/235 (48%), Gaps = 17/235 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDS 88 D ++Y + GGKRLRP+L L+ A + L AC++E IH +L+HDD+ +DD Sbjct: 35 DAMRYGVLDGGKRLRPLLVLSAAEAVGATDSEAALRAACSVELIHAYSLIHDDMPCMDDD 94 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL-------- 140 LRRGK + +G ++L GD + + AF V+ + AL C L Sbjct: 95 VLRRGKPTVHVKFGQAQAMLAGDAMQALAF-EVLTPEDDSVPLALQARLCGLLARAAGQD 153 Query: 141 --AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 A G+ L S+ + LD +H + KT L A++ + + RQAL Y Sbjct: 154 GMAGGQAIDLASIGRPLDEQSLSDMH--RRKTGALLQASVMMGAACGDASPQARQALSEY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 G LG+AFQ+VDD+LD + +GK G+D KPT +L +R + Sbjct: 212 GAALGLAFQVVDDILDVTQASSTLGKTAGKDADQNKPTYVTVLGLSAAQRRAQTL 266 >gi|116511014|ref|YP_808230.1| prenyl transferase [Lactococcus lactis subsp. cremoris SK11] gi|125623073|ref|YP_001031556.1| prenyl transferase [Lactococcus lactis subsp. cremoris MG1363] gi|116106668|gb|ABJ71808.1| Geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp. cremoris SK11] gi|124491881|emb|CAL96802.1| prenyl transferase [Lactococcus lactis subsp. cremoris MG1363] gi|300069820|gb|ADJ59220.1| prenyl transferase [Lactococcus lactis subsp. cremoris NZ9000] Length = 326 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 128/234 (54%), Gaps = 4/234 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLA 68 ++ V L+++R+ + + I ++ GGK +RP L L A ++ + + +A Sbjct: 15 LKDVQALMIERLKINNQEIEVALQKFASRGGKMVRPALFLLFAGIVPNGSKDEEKLIKIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 ++E +H+ATL+HDD++DDS LRRG + +G +V GDF+ + F ++IET + Sbjct: 75 ASLEMLHSATLIHDDIIDDSPLRRGMPSVESQFGKDVAVYAGDFVYTVYFELLIETMNGT 134 Query: 129 ALEALSLVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + A + + + +GEL Q+ + + + T Y+ I KTA L S + AG Sbjct: 135 SFVAKNAQSMKRILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYFAGGD 194 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + + G +G+AFQ+ DD+L++ ++E K I DFR G TLP++LA Sbjct: 195 KKLQHSARKIGRAIGLAFQVYDDILNFTVGLDEADKPILTDFRQGIYTLPLLLA 248 >gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa] gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa] Length = 365 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 132/249 (53%), Gaps = 27/249 (10%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP+L LA ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 101 IHESMRYSLLAGGKRVRPVLCLAACDLVGGSESMALPAACAVEMIHTMSLMHDDLPCMDN 160 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSLVACTL-AE 142 LRRGK +V+G +VL GD LLS AF + I + A+ +A + AE Sbjct: 161 DDLRRGKPTNHIVFGEDVAVLAGDALLSFAFEHIAVSTIHVSPLRIVRAIGELAKAIGAE 220 Query: 143 GELRQLSLSKNLDVTEE----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 G L + +D+ E +++HV KTA L A+ + +++ G + + Sbjct: 221 G----LVAGQVVDICSEGLSEVGLEQLEFIHV--HKTAKLLEGAVVLGAILGGGTDEEVE 274 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L++Y ++G+ FQ+VDD+LD E+GK G+D K T P ++ G ++ + F Sbjct: 275 KLRTYARSIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPRLM----GIEKSREF 330 Query: 253 WKSTINDGK 261 + +N+ K Sbjct: 331 AERLLNEAK 339 >gi|296138466|ref|YP_003645709.1| trans-hexaprenyltranstransferase [Tsukamurella paurometabola DSM 20162] gi|296026600|gb|ADG77370.1| Trans-hexaprenyltranstransferase [Tsukamurella paurometabola DSM 20162] Length = 326 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 88/318 (27%), Positives = 149/318 (46%), Gaps = 15/318 (4%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ +V +I + I + + +L +GGKR RPM T+ + + D + A A Sbjct: 18 DLARVEQVIAEGIAEADGCVIEEALHLFEAGGKRFRPMFTILSGRIGGAMSDQVITAAAA 77 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E H ATL HDDV+D++ RRG +A WGN ++L GD+L ++A + + Sbjct: 78 MELTHLATLYHDDVMDEADARRGAPSANARWGNSIAILAGDYLFARASAFGADLGPR--- 134 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A+ ++A E G++ +L + D + YL I KT L + + +L G + Sbjct: 135 -AVGVIAKCFGELVTGQMLELKGAGESDPVQH-YLDTIWGKTGSLIATCGLLGALHGGAE 192 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ-RGT 246 + Q + G +G+AFQ+ DD++D + GK G D R G TLPV+ A + +G Sbjct: 193 EDLAQRMYRIGDAIGMAFQISDDIIDISSVAQQSGKTPGTDLREGVWTLPVLHALRDQGP 252 Query: 247 --KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 R + + D + E ++ I+ + + Y A+ L LP+S Sbjct: 253 DGDRLREILVGPVTDDALVAEAIE----ILGRSEGMKQARVTLDGYADTARAELAQLPES 308 Query: 305 SWKKSLMEVVDFCLQRLN 322 + +L +V F + RL Sbjct: 309 EARTALESLVTFTVARLG 326 >gi|30686146|ref|NP_850234.1| geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative [Arabidopsis thaliana] gi|330253906|gb|AEC09000.1| geranyl diphosphate synthase 1 [Arabidopsis thaliana] Length = 321 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 96/172 (55%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IH A+LLHDDV+DD+ RRG + +V GN+ SVL GDFLLS+A + K+ E + Sbjct: 70 EMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVA 129 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ L GE +++ S + + Y+ KTA L S + + +++ G V Sbjct: 130 LLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVA 189 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 YG NLG+AFQL+DD+LD+ G +GK D R+G T P++ A + Sbjct: 190 VLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAME 241 >gi|20260214|gb|AAM13005.1| putative trans-prenyltransferase [Arabidopsis thaliana] Length = 423 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 96/172 (55%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IH A+LLHDDV+DD+ RRG + +V GN+ SVL GDFLLS+A + K+ E + Sbjct: 172 EMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVA 231 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ L GE +++ S + + Y+ KTA L S + + +++ G V Sbjct: 232 LLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVA 291 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 YG NLG+AFQL+DD+LD+ G +GK D R+G T P++ A + Sbjct: 292 VLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAME 343 >gi|310642662|ref|YP_003947420.1| polyprenyl synthetase [Paenibacillus polymyxa SC2] gi|309247612|gb|ADO57179.1| Polyprenyl synthetase [Paenibacillus polymyxa SC2] Length = 303 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/232 (34%), Positives = 126/232 (54%), Gaps = 24/232 (10%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DD 83 IPDV++ Y + +GGKRLRP+L +A A + + +ACA+E +HT +L+H Sbjct: 34 IPDVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLP 93 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLV-- 136 +DD RRGK+ V+G +VL GD LL+ AF +++ S +AL LS+V Sbjct: 94 AMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYCIVQAGRLHGVSSDAL--LSIVED 151 Query: 137 ------ACTLAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 A + G++ +S + + + E +Y+H+ K+ ++FS L IAG S Sbjct: 152 LSEMSGARGMVGGQVADMSGEQGMTGIKELEYIHLHKTADLIIFS--LLAGGRIAGADKS 209 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AL+ +G +LG+AFQ+ DD+LD G+ ++MGK D K T P + Sbjct: 210 QLEALRCFGRDLGLAFQIQDDILDLVGDESKMGKKTQSDVEQEKVTYPYFIG 261 >gi|71005942|ref|XP_757637.1| hypothetical protein UM01490.1 [Ustilago maydis 521] gi|46097068|gb|EAK82301.1| hypothetical protein UM01490.1 [Ustilago maydis 521] Length = 946 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 96/324 (29%), Positives = 144/324 (44%), Gaps = 71/324 (21%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IH A+LLHDDV+D S LRRG +A +GN+ S+L GDFLL +A + + Sbjct: 239 LAEITEMIHVASLLHDDVIDASPLRRGAPSAPSAFGNKLSILGGDFLLGRASVALARLRD 298 Query: 127 QEALEALSLVACTLAEGELRQL-------------------------------------- 148 E +E L+ V L EGE+ QL Sbjct: 299 AEVVELLATVIANLVEGEVMQLKSQAAAAESSNASASSTPTHADVWGSEGLLAHTMGLSD 358 Query: 149 ---------SLSKNLDVTEED---YLHVIKSKTAVLFSAALEVSSLIAGV---------- 186 +LS + T YL KTA L + + S ++AG Sbjct: 359 LQAKKAIDDALSTHNQPTPAHFSLYLQKTYLKTAALIAKSTRASVILAGCGADAVHKAKL 418 Query: 187 -------QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK-NIGEDFRNGKPTLPV 238 +VR A YG NLGIAFQLVDD+LD++ GK + G D R G T PV Sbjct: 419 APSVAEHMRAVRDAAYGYGRNLGIAFQLVDDLLDFQSTSAAFGKPSGGADLRLGLATAPV 478 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 + A+Q + + + + VEN+ + ++ +++ L T A + ++A L Sbjct: 479 LYAWQELPGERIHEMVARRFEAQADVENMLR---LVDKSQGLQRTAALAKEHARRATSHL 535 Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322 LPDS K++L+++ + ++R+N Sbjct: 536 DVLPDSDAKQALIKLNEQVIKRVN 559 >gi|302791545|ref|XP_002977539.1| hypothetical protein SELMODRAFT_271252 [Selaginella moellendorffii] gi|300154909|gb|EFJ21543.1| hypothetical protein SELMODRAFT_271252 [Selaginella moellendorffii] Length = 402 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 128/253 (50%), Gaps = 16/253 (6%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSG--GKRLRPM--LTLATALML----- 57 L ++M ++ + + ++V + +Y G GKR RPM L ++++L + Sbjct: 70 LVAEEMAQLGRRLRDMVAAEVPKLASAAEYFFKLGVEGKRFRPMVLLLMSSSLTMVLPSA 129 Query: 58 -------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110 + + H LA E IH A+LLHDDV+D + RRG + + GN+ +VL G Sbjct: 130 AAAAATSDEKNWRHHKLAEITEMIHVASLLHDDVLDHADTRRGIASLNFIMGNKLAVLAG 189 Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170 DFLL++A + ++ E + +S V L GE+ Q ++ + + YL KTA Sbjct: 190 DFLLARAAFSLSTLQNDEVVGLMSKVLEHLVAGEVMQWTVDAEKSSSMDYYLQKTFYKTA 249 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L + + + +++AG V YG +LG+A+QLVDD+LD+ G +GK D R Sbjct: 250 SLIANSCKCIAILAGHPKEVAALAFDYGRHLGLAYQLVDDLLDFTGTKASLGKPALSDLR 309 Query: 231 NGKPTLPVILAFQ 243 G T PV+ A + Sbjct: 310 EGIATAPVLYALE 322 >gi|298707167|emb|CBJ29940.1| solanesyl diphosphate synthase-like protein [Ectocarpus siliculosus] Length = 479 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 21/293 (7%) Query: 42 GKRLRPMLTLATAL------MLEYRGDNHVL----LACAIEFIHTATLLHDDVVDDSALR 91 GKR RP + AL M +R L E IH A+L+HDDV+D++ +R Sbjct: 192 GKRFRPTIVALMALATCDKPMEAHRESEEYTRQGQLGQITEMIHVASLIHDDVLDEAEVR 251 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL- 150 RG +A ++ N+ +VL GD+LL++A ++ + +E ++ +L +GE+ QL + Sbjct: 252 RGGMAVHKLYSNKVAVLAGDYLLARASVLLARLGDVQVVEIMATALDSLVQGEIMQLKMD 311 Query: 151 -SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ--NSVRQALKSYGMNLGIAFQL 207 K LD++ YL KTA L + A + +++ G + + V A + YG ++G+AFQ+ Sbjct: 312 PEKLLDISL--YLRKSYYKTASLITNACKSCAILGGHEFDSDVATAAEEYGYHMGLAFQI 369 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 VDD+LD G + +GK D G T P++ A + + +K + +G + Sbjct: 370 VDDILDIVGAADVLGKPAMADMSLGLATAPILYAAENAPEIKKIVKRRFKKEG-----DK 424 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +KA + + A+ + A + Q+A D++ LP S + L+ + L R Sbjct: 425 EKALKAVLDGDAVARSRELARWHAQRAVDAVLRLPPSEARNGLVNICHIVLTR 477 >gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109] gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109] Length = 296 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 126/233 (54%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + ++Y + +GGKRLRP+L LA + + A A+E IHT +L+HDD+ Sbjct: 32 ESLREAMRYSLLAGGKRLRPILCLAACELAGGEATQALPTAVALEMIHTMSLIHDDLPAM 91 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETKSQEALEA---LSLVAC 138 LRRG+ V+G ++L GD LL++AF MV + ++ L+ LSLVA Sbjct: 92 DDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSPDVPAERLLKVVGELSLVAG 151 Query: 139 T--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L S K +D+ +Y+H+ KT L SA + ++I G ++ +AL+ Sbjct: 152 APGLVGGQVVDLESEGKEVDLETLEYIHL--HKTGALLSACVITGAIIGGADEALIKALR 209 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +Y +G+AFQ++DD+LD + +GK G+D K T P +L +R Sbjct: 210 TYARGIGLAFQIIDDILDITASSDVLGKTAGKDLIADKTTYPKLLGLDESRRR 262 >gi|39996864|ref|NP_952815.1| geranyltranstransferase [Geobacter sulfurreducens PCA] gi|39983752|gb|AAR35142.1| geranyltranstransferase [Geobacter sulfurreducens PCA] gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens KN400] Length = 297 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 21/243 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA- 89 ++Y +F+GGKR+RP+L LA + GD + L ACA+E IHT +L+HDD+ Sbjct: 35 AMRYSVFAGGKRVRPILMLAACDAVG--GDTALALPAACAMEMIHTYSLIHDDLPAMDDD 92 Query: 90 -LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-------CTLA 141 RRG+ V+G ++L GD LL++AF ++ A+ + L+ C + Sbjct: 93 DFRRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAAVGSDRLLPVIHEIALCAGS 152 Query: 142 EGELR------QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G + + +K +D+ Y+H KT L A+++ +++ G +A+ Sbjct: 153 RGMVGGQVVDMESEGNKEIDLATVQYIHT--RKTGALIKASIKAGAVLGGANADAVKAVT 210 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 YG +G+AFQ+ DD+LD G ++GK+ G D GK T P +L +R + Sbjct: 211 RYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPAVLGLAESKRRAQELLDL 270 Query: 256 TIN 258 I Sbjct: 271 AIE 273 >gi|269214464|ref|ZP_06158593.1| geranyltranstransferase [Neisseria lactamica ATCC 23970] gi|269209749|gb|EEZ76204.1| geranyltranstransferase [Neisseria lactamica ATCC 23970] Length = 292 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 117/232 (50%), Gaps = 14/232 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y + GGKRLRPML LA + + E D AIE Sbjct: 14 LLLERFLPSENEIPHTLHEAMRYAVLDGGKRLRPMLVLAASELGESVADAVGQAMAAIEM 73 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++L GD L +QAF ++ A Sbjct: 74 IHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDALQTQAFDVLSRPTELPAAR 133 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G R ++ + +D+ + D + KT L AA+ + S+ Sbjct: 134 QLAMLSVLAKAGGSRGMAGGQAIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLGSMSC 193 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 194 PNLSEDSLAILDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 245 >gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza] Length = 364 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/232 (30%), Positives = 124/232 (53%), Gaps = 15/232 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 MI D ++Y + +GGKR+RPML +A ++ + ACA+E IHT +L+HDD+ +D Sbjct: 99 MIHDAMRYSLLAGGKRVRPMLCIAACEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMD 158 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---- 142 + LRRGK V+G +VL GD LL+ AF + + A E + LA+ Sbjct: 159 NDDLRRGKPTNHKVFGKDVAVLAGDALLAFAFEFMATATTGVAPERILAAVGELAKAIGT 218 Query: 143 -----GELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G++ L+ + + +V + +++H+ KTA L A++ + +++ G + + L+ Sbjct: 219 EGLVAGQVVDLNCTGDANVGLDTLEFIHI--HKTAALLEASVVLGAILGGGSSDQIEKLR 276 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ +G+ Q+VDD+LD E+GK G+D K T P +L + + Sbjct: 277 TFARKIGLLLQVVDDILDVTKSSEELGKTAGKDLAVDKTTYPKLLGLDKAVE 328 >gi|163790196|ref|ZP_02184629.1| geranyltranstransferase [Carnobacterium sp. AT7] gi|159874471|gb|EDP68542.1| geranyltranstransferase [Carnobacterium sp. AT7] Length = 299 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/244 (31%), Positives = 134/244 (54%), Gaps = 15/244 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + + Y I +GGKR+RP+L LAT L + A+EFIHT +L+HDD+ Sbjct: 30 EKLHEAMSYSIAAGGKRIRPLLLLATIQSLGGDIKKGYAASAALEFIHTYSLIHDDLPAM 89 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLVACTLAE- 142 LRRGK + +V+G ++L GD LL+QAF ++ ++ S++ ++ +S +A + Sbjct: 90 DDDDLRRGKPTSHIVYGEDIAILAGDALLTQAFEIIADSDESSEKKVKLISALAKSAGPK 149 Query: 143 ----GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G++ + K+L++ E ++H ++KT L + + +IA + + L Y Sbjct: 150 GMILGQMADIQGEKKSLNLEELQFIH--RNKTGELLKFPIYAACVIADTTTEIEEQLMGY 207 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK---REKNFWK 254 ++G+A+Q+ DD+LD G+V E+GKN G D + K T P +L + K +E K Sbjct: 208 AEHIGLAYQIRDDILDVIGDVAEIGKNTGMDEAHNKSTYPGLLTLEGAKKALAKELTAAK 267 Query: 255 STIN 258 + +N Sbjct: 268 TNLN 271 >gi|262039631|ref|ZP_06012924.1| geranyltranstransferase [Leptotrichia goodfellowii F0264] gi|261746346|gb|EEY33892.1| geranyltranstransferase [Leptotrichia goodfellowii F0264] Length = 271 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 119/228 (52%), Gaps = 14/228 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + +KY + +GGKR+RP+L + + D +A A+EFIH +L+HDD+ + Sbjct: 9 EELSEAMKYAVMNGGKRIRPILMYMICDLFGKKYDKIEDMATALEFIHCYSLVHDDLPAM 68 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D+ RRGK+ + +G T++LVGD LL++AF ++ E++ + ++A Sbjct: 69 DNDMYRRGKLTTHVKYGESTAILVGDVLLTEAFNVIAESEKTDDTAKAKIIAKLSEYAGF 128 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + + +D+ E Y+H +KT L +AA+E+ + ++ S R+ L Sbjct: 129 YGMIGGQFMDIKSEHTRVSYDTLKYIHA--NKTGKLITAAIELPLIALDIEESKREKLVG 186 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y +G AFQ+ DD+LD G+ E GK D + K T P + ++ Sbjct: 187 YSELIGTAFQIKDDILDIEGKFEETGKQ-ASDEKLEKTTYPSLFGLEK 233 >gi|79324330|ref|NP_001031483.1| geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative [Arabidopsis thaliana] gi|57222236|gb|AAW39025.1| At2g34630 [Arabidopsis thaliana] gi|330253907|gb|AEC09001.1| geranyl diphosphate synthase 1 [Arabidopsis thaliana] Length = 422 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 96/172 (55%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IH A+LLHDDV+DD+ RRG + +V GN+ SVL GDFLLS+A + K+ E + Sbjct: 171 EMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVA 230 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ L GE +++ S + + Y+ KTA L S + + +++ G V Sbjct: 231 LLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVA 290 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 YG NLG+AFQL+DD+LD+ G +GK D R+G T P++ A + Sbjct: 291 VLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAME 342 >gi|319443460|pdb|3APZ|A Chain A, Apo Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase gi|319443461|pdb|3APZ|B Chain B, Apo Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase Length = 348 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 118/240 (49%), Gaps = 19/240 (7%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDNHVL-------------- 66 + ++V + +Y G GK+ R + L A L+ R ++ Sbjct: 29 VLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALDVRVPEALIGESTDIVTSELRVR 88 Query: 67 ---LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A E IH A+LLHDDV+DD+ RRG + +V GN+ SVL GDFLLS+A + Sbjct: 89 QRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAA 148 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ E + L+ L GE +++ S + + Y+ KTA L S + + +++ Sbjct: 149 LKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVL 208 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G V YG NLG+AFQL+DD+LD+ G +GK D R+G T P++ A + Sbjct: 209 TGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAME 268 >gi|167892795|ref|ZP_02480197.1| heptaprenyl diphosphate synthase component II [Burkholderia pseudomallei 7894] Length = 363 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 147/304 (48%), Gaps = 21/304 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-------ACAIEFIHTATLLHDDVVD 86 ++Y + GK++RP+L L A + G L A ++E +H ATL+HDD++D Sbjct: 52 LEYETYQRGKKIRPLLLLLAASLFRADGARRAPLPVKAIMGAVSLEMLHVATLIHDDIID 111 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQA---FCMVIETKSQEALEALSL-VACTLAE 142 + LRRG + G ++LVGD QA F ++T++ AL L L V +L Sbjct: 112 AAPLRRGIASVVGARGIDMAILVGDLQFIQAIRVFARHVDTQADMALVRLVLDVGFSLCC 171 Query: 143 GELRQLSLSK--NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 GE+ + S+ + ++ Y V KTAVLF A E+ + ++G +AL YG + Sbjct: 172 GEIDERSVDRRESIGFLRNHYFKVADRKTAVLFGLACEIGAALSGATKREIRALSQYGRD 231 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-GTKREKNFWKSTIND 259 LGIAFQ++DDV D+ GK D TLP+I A + G E + I Sbjct: 232 LGIAFQIMDDVFDFLHPQASAGKAPQADIAARCLTLPIINAMEELGDAHE----LTRIMR 287 Query: 260 GKISVEN---LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 G ++ L +A + ++ LVD A + +A D L+ L D +++L + + Sbjct: 288 GAVAAPEPAALDRAARAVERSQGLVDAYRAARRHALQAADCLQGLADHPERRALESIASY 347 Query: 317 CLQR 320 + R Sbjct: 348 VVDR 351 >gi|11322965|emb|CAC16849.1| geranyl diphosphate synthase [Arabidopsis thaliana] Length = 422 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 118/240 (49%), Gaps = 19/240 (7%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDNHVL-------------- 66 + ++V + +Y G GK+ R + L A L+ R ++ Sbjct: 103 VLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALDVRVPEALIGESTDIVTSELRVR 162 Query: 67 ---LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +A E IH A+LLHDDV+DD+ RRG + +V GN+ SVL GDFLLS+A + Sbjct: 163 QRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAA 222 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ E + L+ L GE +++ S + + Y+ KTA L S + + +++ Sbjct: 223 LKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVL 282 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G V YG NLG+AFQL+DD+LD+ G +GK D R+G T P++ A + Sbjct: 283 TGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAME 342 >gi|303232200|ref|ZP_07318903.1| putative geranyltranstransferase [Veillonella atypica ACS-049-V-Sch6] gi|302513306|gb|EFL55345.1| putative geranyltranstransferase [Veillonella atypica ACS-049-V-Sch6] Length = 292 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 13/235 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L + + + + + Y + GGKR+RP+LT A ++ + CA+E IHT + Sbjct: 20 VLNSPIPEYKRLYESMNYSLLQGGKRIRPILTKAVLDAMKVDASLYKEFLCALECIHTYS 79 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +D+ RRG + V+G+ ++L GD LL+ AF + E + A + + + Sbjct: 80 LIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGLLTYAFQLCSENTTASAEQKIKAI 139 Query: 137 AC--TLAEGE-------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 C T A E LS K++ + E LH KT LF+AA+E+ +++ Sbjct: 140 QCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLH--SGKTGALFNAAIELGLILSNAD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + A +Y LG+ FQ+ DD+LD G + E+GK G D R K T +L Sbjct: 198 QAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGKTPGSDIRQDKSTYVSLLGL 252 >gi|134279621|ref|ZP_01766333.1| IS element protein [Burkholderia pseudomallei 305] gi|167901285|ref|ZP_02488490.1| heptaprenyl diphosphate synthase component II [Burkholderia pseudomallei NCTC 13177] gi|254181827|ref|ZP_04888424.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655] gi|134248821|gb|EBA48903.1| IS element protein [Burkholderia pseudomallei 305] gi|184212365|gb|EDU09408.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655] Length = 363 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 147/304 (48%), Gaps = 21/304 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-------ACAIEFIHTATLLHDDVVD 86 ++Y + GK++RP+L L A + G L A ++E +H ATL+HDD++D Sbjct: 52 LEYETYQRGKKIRPLLLLLAASLFRADGARRAPLPVKAIMGAVSLEMLHVATLIHDDIID 111 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQA---FCMVIETKSQEALEALSL-VACTLAE 142 + LRRG + G ++LVGD QA F ++T++ AL L L V +L Sbjct: 112 AAPLRRGIASVVGARGIDMAILVGDLQFIQAIRVFARHVDTQADMALVRLVLDVGFSLCC 171 Query: 143 GELRQLSLSK--NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 GE+ + S+ + ++ Y V KTAVLF A E+ + ++G +AL YG + Sbjct: 172 GEIDERSVDRRESIGFLRNHYFKVADRKTAVLFGLACEIGAALSGATKREIRALSQYGRD 231 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-GTKREKNFWKSTIND 259 LGIAFQ++DDV D+ GK D TLP+I A + G E + I Sbjct: 232 LGIAFQIMDDVFDFLHPQASAGKAPQADIAARCLTLPIINAMEELGDAHE----LTRIMR 287 Query: 260 GKISVEN---LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 G ++ L +A + ++ LVD A + +A D L+ L D +++L + + Sbjct: 288 GAVAAPEPAALDRAARAVERSQGLVDAYRAARRHALQAADCLQGLADRPERRALESIASY 347 Query: 317 CLQR 320 + R Sbjct: 348 VVDR 351 >gi|319443462|pdb|3AQ0|A Chain A, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443463|pdb|3AQ0|B Chain B, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443464|pdb|3AQ0|C Chain C, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443465|pdb|3AQ0|D Chain D, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443466|pdb|3AQ0|E Chain E, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443467|pdb|3AQ0|F Chain F, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443468|pdb|3AQ0|G Chain G, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443469|pdb|3AQ0|H Chain H, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) Length = 348 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 96/172 (55%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IH A+LLHDDV+DD+ RRG + +V GN+ SVL GDFLLS+A + K+ E + Sbjct: 97 EMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVA 156 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ L GE +++ S + + Y+ KTA L S + + +++ G V Sbjct: 157 LLATAVEHLVTGETMEITSSTAARYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVA 216 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 YG NLG+AFQL+DD+LD+ G +GK D R+G T P++ A + Sbjct: 217 VLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAME 268 >gi|33152401|ref|NP_873754.1| farnesyl-diphosphate synthase [Haemophilus ducreyi 35000HP] gi|33148624|gb|AAP96143.1| geranyltranstransferase [Haemophilus ducreyi 35000HP] Length = 308 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 145/284 (51%), Gaps = 19/284 (6%) Query: 13 EKVNFLILKRIC-SDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +++N + ++ S E P + Y + GGKR+RP L T ML A Sbjct: 25 QRINHFLSNQLPQSPTEQPPLNQAMAYAVLLGGKRIRPFLMYTTGKMLGVPLTTLDHSAA 84 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---- 123 AIE IH +L+HDD+ +D+ LRRGK + + T++L G+ L + AF ++ Sbjct: 85 AIEAIHAYSLVHDDLPAMDNDQLRRGKPTCHIAFDEATAILAGNALQALAFELIANAPHL 144 Query: 124 TKSQEALEALSLVACTLAEG-----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 T Q+ + +L A+G L L+ +K+L++TE + +H K+ ++ S + Sbjct: 145 TDWQKVQQIRTLSTAAGAKGMCLGQNLDLLAENKSLNLTELEQIHRHKTGALIVASVLMA 204 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 V+ N+++Q L+ Y +G+AFQ+ DD+LD G+ +++GK +G D + K T P Sbjct: 205 VNLSDHAQNNAIKQPLERYAQAIGLAFQVQDDILDVIGQTDKIGKTVGADQQLHKSTYPK 264 Query: 239 ILAFQRGTKREKNFWKSTIN---DGKISVENLKKA--FIIMREN 277 +L + ++ ++ ++ +N + LK+ FII REN Sbjct: 265 LLGLTQAKQKAQDLHQTALNALAELPFKSTALKELADFIIHREN 308 >gi|281204458|gb|EFA78653.1| hypothetical protein PPL_08108 [Polysphondylium pallidum PN500] Length = 417 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 15/277 (5%) Query: 42 GKRLRP--MLTLATALML-----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 GKR+RP +L LA A+ E ++ + LA +E +HTA+L+HDDV+D + RR Sbjct: 110 GKRIRPTVLLLLARAITSNDCPSEPISESQLKLAQVVEMLHTASLVHDDVIDGADTRREM 169 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 + + N+ ++L G+FL ++ ++ ++ E +S + L +GEL Q+ K+ Sbjct: 170 ASVNCAYSNKLAILCGNFLTARTIVLLSTLRNHHVTELVSNIISDLVDGELMQI---KSN 226 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 + E Y+ KTA LF+ ++++G ++ +G NLG+AFQ++DD+LD Sbjct: 227 STSFESYIRKTYLKTASLFANGCRSIAVLSGADANMTNMATEFGKNLGLAFQIIDDLLDV 286 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274 G +GK D G T PV+ A + E + G + + N +++ Sbjct: 287 TGSSESLGKPASVDMSLGLATAPVLFALEEYPDLEVLINRKFSESGDVDIANQ----LVL 342 Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + N A+ T+ A Y K+ + L LP S + L+ Sbjct: 343 KSN-AIEKTKSLAIEYCNKSIEFLMKLPQSQSRDLLI 378 >gi|303228797|ref|ZP_07315611.1| putative geranyltranstransferase [Veillonella atypica ACS-134-V-Col7a] gi|302516509|gb|EFL58437.1| putative geranyltranstransferase [Veillonella atypica ACS-134-V-Col7a] Length = 292 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 13/235 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L + + + + + Y + GGKR+RP+LT A ++ + CA+E IHT + Sbjct: 20 VLNSPIPEYKRLYESMNYSLLQGGKRIRPILTKAVLDAMKVDASLYKEFLCALECIHTYS 79 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +D+ RRG + V+G+ ++L GD LL+ AF + E + A + + + Sbjct: 80 LIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGLLTYAFQLCSENTTASAEQKIKAI 139 Query: 137 AC--TLAEGE-------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 C T A E LS K++ + E LH KT LF+AA+E+ +++ Sbjct: 140 QCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLH--SGKTGALFNAAIELGLILSNAD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + A +Y LG+ FQ+ DD+LD G + E+GK G D R K T +L Sbjct: 198 QAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGKTPGSDIRQDKSTYVSLLGL 252 >gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531] gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531] Length = 291 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 116/210 (55%), Gaps = 11/210 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKRLRP+L +A A + G + +ACA+E IHT +L+HDD+ +D+ RRG Sbjct: 36 YSLMAGGKRLRPVLLMAAADAVGADGAKFLSVACALEMIHTYSLIHDDLPAMDNDDYRRG 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEGEL 145 K+ V+G+ ++L GD LL+ AF +++ ++ A L +V A + G++ Sbjct: 96 KLTNHKVFGDGIAILAGDGLLTLAFTVILRQQNVSADTLLRVVDEISRAAGAEGMVGGQV 155 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 L ++ ++ E+ V KT LF AAL +++ G + AL +Y G+AF Sbjct: 156 LDLRAEEH-RISMEEMRRVHMGKTGALFRAALRSGAILGGASEAQLAALTTYAEQFGLAF 214 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 Q+ DD+LD G +GK +G D +N K T Sbjct: 215 QITDDILDVIGTAENIGKPVGSDEKNHKST 244 >gi|78223142|ref|YP_384889.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15] gi|78194397|gb|ABB32164.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15] Length = 297 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 121/235 (51%), Gaps = 17/235 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y +F+GGKR+RP+L LA + D + ACA+E IHT +L+HDD+ Sbjct: 35 AMRYSVFAGGKRIRPVLMLAACEAVGGTPDLALPAACAMEMIHTYSLIHDDLPAMDDDDF 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEA-----LEALSLVACT-- 139 RRG+ V+G ++L GD LL++AF ++ K+ A + + + A + Sbjct: 95 RRGRPTNHKVFGEAIAILAGDALLTEAFILMSSPEYAAKAGHARILPVIHEIGICAGSRG 154 Query: 140 LAEGELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + G++ + K++D+ Y+H KT L A+++ +++ G + A+ Y Sbjct: 155 MVGGQVVDMESEGKKDIDLATVQYIHT--HKTGALMKASVKAGAILGGAEGDALAAMTRY 212 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 G +G+AFQ+ DD+LD G ++GK+ G D GK T P ++ +R + Sbjct: 213 GEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPAVMGLADSKRRAQEL 267 >gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM 16795] gi|164603021|gb|EDQ96486.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM 16795] Length = 295 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 129/233 (55%), Gaps = 19/233 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVLLAC-AIEFIHTATLLHDDV--V 85 I + + Y + SGGKRLRP+LTL +A ++ GD V+ C AIE IHT +L+HDD+ + Sbjct: 32 IFEAMNYSLSSGGKRLRPILTLESAKII--GGDVKEVIPFCVAIEMIHTYSLIHDDLPAM 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEA----LEALSLVA--- 137 D+ RRGK V+G+ + L GD LL+ AF M+ E+ +E L+A+ +A Sbjct: 90 DNDDFRRGKPTNHKVFGDGMATLAGDALLNYAFEIMLKESLGKENADIRLKAIYEIARGA 149 Query: 138 --CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G++ + S +K+++ + D++H+ +KTA + + +++ Q + Sbjct: 150 GIYGMIGGQVVDIESENKSIEKEKLDFIHM--NKTAAMIIGCMRAGAIMGNACEDDLQNI 207 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 Y N+G+AFQ+VDD+LD G+ +GK +G D N K T P ++ K Sbjct: 208 TKYAKNIGLAFQIVDDILDIVGDEKALGKPVGSDIENHKSTYPSLIGLDESKK 260 >gi|224543278|ref|ZP_03683817.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM 15897] gi|224523811|gb|EEF92916.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM 15897] Length = 284 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 85/261 (32%), Positives = 136/261 (52%), Gaps = 19/261 (7%) Query: 12 MEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-- 67 +E+VN LK I S ++ + + Y + +GGKRLRP+L + T + Y D H L Sbjct: 7 IEEVNAR-LKEILSSYRPGLVKEAMTYSVMAGGKRLRPLLFIQT--LRAYSVDYHKYLDI 63 Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 ACAIE IHT +L+HDD+ +D+ LRRGK + T++L GD LL+++ ++I Sbjct: 64 ACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTCHKQFDEATAILAGDALLNESMNVIIRMD 123 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEE------DYLHVIKS-KTAVLFSAALE 178 +AL+ L A G L + + D+ E D L I KT L S ++ Sbjct: 124 LDDALKVEVLRYLYNASG-LGGMIYGQQQDMYFETHTATLDELQAIHHDKTGALISVPMK 182 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 ++ LIA +++ + L++ G LG+AFQ+ DD+LD +GK +G D N K T Sbjct: 183 IAGLIAKKEDADK--LENIGFKLGLAFQIQDDILDVTSTTETLGKKVGSDIANHKSTYVS 240 Query: 239 ILAFQRGTKREKNFWKSTIND 259 ++ + KR + ++ + D Sbjct: 241 LIGLETSQKRVEELFEECLAD 261 >gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp. lyrata] gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp. lyrata] Length = 356 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 19/239 (7%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 +C V I + ++Y + SGGKR+RPML LA ++ + + ACA+E IH ++L+ D Sbjct: 81 LCEPVLKIREAMRYTLLSGGKRVRPMLCLAACELVGGQESTAMPCACAVEMIHASSLIQD 140 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-------------- 126 D+ +DD LRRGK V+G ++L D L++ A +E+ S Sbjct: 141 DLPCMDDDNLRRGKPTNHKVFGENIAILAVDALIALAIKHTVESTSLDVPPERVLLAILE 200 Query: 127 -QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 A+ LVA A+ + S + + +++H+ KTA L AA + +++ G Sbjct: 201 MARAVGTEGLVAGQAADLDGEGKSFDNDTGLKHLEFIHI--HKTAALLEAAAVMGAIMGG 258 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + + ++SY +G+ FQ+VDDVLD E+GK G+D + K T P ++ ++ Sbjct: 259 GSDEEIERIRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLISEKLTYPKVMGVEK 317 >gi|323140954|ref|ZP_08075866.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067] gi|322414557|gb|EFY05364.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067] Length = 291 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 125/237 (52%), Gaps = 9/237 (3%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 N+L + + + + ++Y + +GGKR+RP+L +A A + +G N++ +AC +E IH Sbjct: 16 NYLKNRIAKKGISKVDEAMEYSLMAGGKRIRPILLMAAAEAVGSKGYNYLPVACGLEMIH 75 Query: 76 TATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ------ 127 T +L+HDD+ RRG++ V+G +VL GD LL+ AF +++E K+ Sbjct: 76 TYSLIHDDLPCMDDDDYRRGRLTNHKVFGEAMAVLAGDGLLTLAFEVMLEQKNVDPKVLI 135 Query: 128 EALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E + +++ A + L L + +T E+ + KT LF AA+ + +AG Sbjct: 136 ETVREMAMCAGNFGMVGGQGLDLEFEGKKITPEELRKLHAGKTGALFIAAIRGGAHLAGA 195 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + AL + LG+AFQ+ DD+LD G E+GK +G D +N K T + Q Sbjct: 196 NDQQLLALTKFADLLGLAFQITDDILDVEGTEEELGKPVGSDAKNHKSTYVTLYGLQ 252 >gi|223996715|ref|XP_002288031.1| geranylgeranyl diphosphate synthase [Thalassiosira pseudonana CCMP1335] gi|220977147|gb|EED95474.1| geranylgeranyl diphosphate synthase [Thalassiosira pseudonana CCMP1335] Length = 320 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/220 (33%), Positives = 120/220 (54%), Gaps = 18/220 (8%) Query: 42 GKRLRPMLTL--ATALMLEYRGDN-----HVL-----LACAIEFIHTATLLHDDVVDDSA 89 GK++RP++ + + A+M G+ H L LA E IHTA+L HDDV+D++ Sbjct: 26 GKQVRPVMVMLFSRAMMQMGTGEGNPSTAHALKSQRRLAEITEMIHTASLFHDDVIDEAD 85 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG+ AA +GN+ ++L GD+LL++A + ++ + +E +S V L GE+ Q+ Sbjct: 86 TRRGQPAAHRAFGNKMAILAGDYLLARASICLARLRNVDVVECMSTVIEHLVRGEVLQIK 145 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI------AGVQNSVRQALKSYGMNLGI 203 ++ E YL KTA L + + + ++L+ +G+ V +A YG ++G+ Sbjct: 146 DNRTGVPDMEGYLRKNFYKTASLMANSCKSAALLGASANGSGISPVVVEAAYLYGKHIGV 205 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AFQL+DD LD+ G +GK D G T PV+ A + Sbjct: 206 AFQLIDDALDFEGSAASLGKPALADLNAGLSTAPVLFAAE 245 >gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1] gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1] Length = 295 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 83/276 (30%), Positives = 136/276 (49%), Gaps = 23/276 (8%) Query: 22 RICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 R+ +++P ++Y + GGKR+RP+L A + + + A A+E IH Sbjct: 21 RLLPQTDVLPQRLHAAMRYSVLEGGKRVRPLLAYAAGELAGAPIERVEIAAAAVELIHAY 80 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK----SQEALE 131 +L+HDD+ +DD LRRGK + + T++LVGD L S AF ++ E + L+ Sbjct: 81 SLVHDDMPCMDDDVLRRGKPTCHIEYDEATALLVGDALQSLAFQLLSEHRLSDDPSRQLQ 140 Query: 132 ALSLVACT-----LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + L+A +A G+ L S+ K L + E + +H+ K T L AA+ + + Sbjct: 141 MVRLLAAASGSRGMAGGQAIDLASVGKQLAMPELEQMHIYK--TGALIRAAILLGAHCGK 198 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + + L YG +G+AFQ+VDDVLD + +GK G+D N KPT +L Q Sbjct: 199 LDQAQLDKLDRYGKCIGLAFQVVDDVLDSEADTATLGKTAGKDKDNDKPTYVTLLGVQAA 258 Query: 246 TKREKNFWKS---TINDGKISVENLK--KAFIIMRE 276 + + T+ + S + L FI+MR+ Sbjct: 259 KRMAATLHQEALDTLKEFGASAQRLHDLADFIVMRK 294 >gi|269123398|ref|YP_003305975.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112] gi|268314724|gb|ACZ01098.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112] Length = 282 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 86/290 (29%), Positives = 148/290 (51%), Gaps = 38/290 (13%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP--MLTLATALMLEYRGDNHVLL 67 KD++K +LK+ S ++ I D+++Y + GGKR+RP M LA Y+ D + Sbjct: 10 KDIDKSIRKVLKKHKS-IKEIDDMLEYGVLLGGKRIRPSIMYILANV----YKKDKKCIE 64 Query: 68 --ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 A +IE IH +L+HDD+ +D+ RRG + +G +VLVGD LL+ AF ++ E Sbjct: 65 NEAVSIELIHAYSLIHDDLPCMDNDNYRRGNLTVHKKYGEANAVLVGDALLTLAFSVLAE 124 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE--------DYLHVIKSKTAVLFSA 175 + E S+VA + G + + L + LD+ E + + + +KTA+L A Sbjct: 125 S---EYSNKYSIVALSYYSGH-KGMILGQYLDLLNENKADINFDELMEIHLNKTAMLLMA 180 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++E++++ + R AL+ Y + LG+A+Q+ DD+L+ ++GK D +N K T Sbjct: 181 SVEIAAISLSINTEARNALRKYILYLGLAYQIQDDILEMESSFEKIGKE-NTDEKNNKST 239 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 P IL ++ ++ F I I++ N+ L+D Y Sbjct: 240 FPKILGLEKSKILKEKFTNDAIE--------------IVKGNQKLIDFAY 275 >gi|257125255|ref|YP_003163369.1| polyprenyl synthetase [Leptotrichia buccalis C-1013-b] gi|257049194|gb|ACV38378.1| Polyprenyl synthetase [Leptotrichia buccalis C-1013-b] Length = 296 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 18/235 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + + ++Y + +GGKR+RP+L + E D +A A+EFIH +L+HDD Sbjct: 30 EKLSEAMEYAVMNGGKRIRPILMYMICDLFEKNNCKSYDKIKEIAAALEFIHCYSLVHDD 89 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVA- 137 + +D+ RRGK+ + VLVGD LL++AF ++ +KS + +E +S ++ Sbjct: 90 LPAMDNDDYRRGKLTVHKKYNEAIGVLVGDVLLTEAFGIIANSKSLGDKNKIEIISKLSE 149 Query: 138 ----CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + G+ + S +K +++ Y+H KT L +AA+E+ + +++ R+ Sbjct: 150 YAGFFGMVGGQFVDMESENKKVEIDTLKYIHA--HKTGKLLTAAIELPMIALDIESEKRE 207 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + Y LGIAFQ+ DD+LD G E+GK D +N K T P I ++ K Sbjct: 208 KMVEYSKLLGIAFQIKDDILDIEGNFEEIGKK-SNDAQNEKTTYPSIFGLEKSKK 261 >gi|291287805|ref|YP_003504621.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290884965|gb|ADD68665.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 299 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/242 (29%), Positives = 126/242 (52%), Gaps = 20/242 (8%) Query: 24 CSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 C D V+ + D ++Y +F+GGKRLRP L ++ + E D A A+E +HT +L+H Sbjct: 27 CPDENVKGLVDAMRYSLFAGGKRLRPALVFSSYGVFEGYFDKATPFAAAVEMLHTYSLIH 86 Query: 82 DDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 DD+ RRGK ++G T++L GD LL++AF ++ + +E ++ Sbjct: 87 DDLPAMDDDDYRRGKPTNHKMYGEATAILAGDGLLTKAFEVMCNAEINPDVEPAQMLEAA 146 Query: 140 L----AEGELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGV 186 A G+ R + + D+ ED ++H+ +KT+ L S E+ +++ Sbjct: 147 YKLADAAGD-RGMVGGQFTDMEAEDGVFNSATVDFIHM--NKTSRLISYCCELGAILGFG 203 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ ++ YG+ +G+AFQ+VDD+LD E+GKN+G D GK T P + + Sbjct: 204 SEDDKKRMREYGIRIGLAFQIVDDILDIASTTEELGKNVGSDQERGKATYPALHGLEESH 263 Query: 247 KR 248 ++ Sbjct: 264 RK 265 >gi|219125696|ref|XP_002183110.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405385|gb|EEC45328.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 309 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 87/319 (27%), Positives = 154/319 (48%), Gaps = 19/319 (5%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHV 65 L K+++ + I + + SD ++ K+ GKR RP + A + Sbjct: 3 LVEKELQPFSDSIKELVSSDQPILSMAAKHFFEKRHGKRFRPTIVQLMAKTAQ------- 55 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 L +E IH A+L+HDDV+D++ RRG A ++ N+ +VL GD+LL++A ++ + Sbjct: 56 -LGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLARLE 114 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + ++ ++ +L GE+ QL + E YL KTA L A ++L+ G Sbjct: 115 NTAVVQVMATALESLVAGEIMQLKSPAESLLEMESYLRKSYYKTASLICYACRSTALLGG 174 Query: 186 --VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++V A + +G +LG+A+Q+ DD+LD+ +GK D G T P++ A Q Sbjct: 175 HAYGSTVATACEEFGFHLGLAYQIQDDILDFTAAATVLGKPALADMDLGLSTAPILYAAQ 234 Query: 244 RGTKREKNFWK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + + D + ++E L K+ + M + RAL A + Q+A D+L L Sbjct: 235 EFPHLKPLVMRRFKEKGDKQAALEALYKSDVAMDKARAL------ARFHAQRAVDALLRL 288 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P S + +L+ + + R Sbjct: 289 PPSESRNALVRLTHAVITR 307 >gi|219854470|ref|YP_002471592.1| hypothetical protein CKR_1127 [Clostridium kluyveri NBRC 12016] gi|219568194|dbj|BAH06178.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 298 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 120/224 (53%), Gaps = 9/224 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I D ++Y + +GGKR+RPML L T M + +A AIE IHT +L+HDD+ +D+ Sbjct: 37 IYDSMEYSLNAGGKRIRPMLFLLTYRMYNKDYSKVMDIAAAIEMIHTYSLIHDDLPAMDN 96 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACTL-AEG 143 LRRGK ++G ++L GD LL++A ++ K + A+ A S+++ + AEG Sbjct: 97 DDLRRGKPTNHKIFGEAIAILGGDALLNEAMSIMFRHCIGKGENAIRACSIISESAGAEG 156 Query: 144 ELRQLS---LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + + LS+N+ ++ + ++ KT + A++ +++ A LK YG Sbjct: 157 MIGGQTVDILSENVKISVDKLYYMHSRKTGAIIKASIVSAAVYASTGEEEIDKLKCYGEK 216 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+AFQ+ DD+LD G+ +GK D N K T + R Sbjct: 217 LGLAFQIKDDILDVLGDDAVLGKKTKSDLNNDKTTFVTVYGLDR 260 >gi|153953855|ref|YP_001394620.1| Fps [Clostridium kluyveri DSM 555] gi|146346736|gb|EDK33272.1| Fps [Clostridium kluyveri DSM 555] Length = 293 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 120/224 (53%), Gaps = 9/224 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I D ++Y + +GGKR+RPML L T M + +A AIE IHT +L+HDD+ +D+ Sbjct: 32 IYDSMEYSLNAGGKRIRPMLFLLTYRMYNKDYSKVMDIAAAIEMIHTYSLIHDDLPAMDN 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACTL-AEG 143 LRRGK ++G ++L GD LL++A ++ K + A+ A S+++ + AEG Sbjct: 92 DDLRRGKPTNHKIFGEAIAILGGDALLNEAMSIMFRHCIGKGENAIRACSIISESAGAEG 151 Query: 144 ELRQLS---LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + + LS+N+ ++ + ++ KT + A++ +++ A LK YG Sbjct: 152 MIGGQTVDILSENVKISVDKLYYMHSRKTGAIIKASIVSAAVYASTGEEEIDKLKCYGEK 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+AFQ+ DD+LD G+ +GK D N K T + R Sbjct: 212 LGLAFQIKDDILDVLGDDAVLGKKTKSDLNNDKTTFVTVYGLDR 255 >gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605] gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605] Length = 296 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 81/250 (32%), Positives = 128/250 (51%), Gaps = 18/250 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + ++Y + +GGKRLRP+L LA + + A A+E IHT +L+HDD+ Sbjct: 32 ESLREAMRYSLLAGGKRLRPILCLAACELAGGEATQALPTAVALEMIHTMSLIHDDLPAM 91 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-------ALSLVAC 138 LRRG+ V+G ++L GD LL++AF MV E LSLVA Sbjct: 92 DDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSPGVPAERLLKVVGELSLVAG 151 Query: 139 T--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L S K +D+ +Y+H+ KT L SA + ++I G ++ +AL+ Sbjct: 152 APGLVGGQVVDLESEGKEVDLETLEYIHL--HKTGALLSACVITGAMIGGADEALIKALR 209 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 +Y +G+AFQ++DD+LD +GK G+D K T P +L +R Sbjct: 210 TYARGIGLAFQIIDDILDITASSEVLGKTAGKDLIADKTTYPKLLGLDESRRRADAL--- 266 Query: 256 TINDGKISVE 265 +N+ K S++ Sbjct: 267 -VNEAKESLQ 275 >gi|226311927|ref|YP_002771821.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599] gi|226094875|dbj|BAH43317.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599] Length = 300 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 79/236 (33%), Positives = 122/236 (51%), Gaps = 17/236 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + +KY + +GGKRLRPML LA L+ + V A A+E IHT +L+HDD+ Sbjct: 33 ENLYESMKYSLMAGGKRLRPMLVLAVLEALDKPIERGVAFAVALEMIHTYSLIHDDLPAM 92 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVA---- 137 LRRGK V+G T++L GD LL++AF + E A ++L+A Sbjct: 93 DDDDLRRGKPTNHKVFGEATAILAGDALLTRAFAYIAEAYMDRTDVSAATTVNLIAELGK 152 Query: 138 ----CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + G++ + SK L++ + +++H + KT L AAL +A + Sbjct: 153 RAGATGMVGGQMADIEGESKRLNLDQLEFIH--RHKTGDLLIAALRGGGYLAEASEGQME 210 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 AL YG+ +G+AFQ+ DD+L+ G+ E+GK +G D K T P +L R Sbjct: 211 ALTRYGVCIGLAFQIQDDILNVEGDAQELGKAVGSDADREKATYPSLLGLAESKAR 266 >gi|217419927|ref|ZP_03451433.1| polyprenyl synthetase [Burkholderia pseudomallei 576] gi|217397231|gb|EEC37247.1| polyprenyl synthetase [Burkholderia pseudomallei 576] Length = 363 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 147/304 (48%), Gaps = 21/304 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-------ACAIEFIHTATLLHDDVVD 86 ++Y + GK++RP+L L A + G L A ++E +H ATL+HDD++D Sbjct: 52 LEYETYQRGKKIRPLLLLLAASLFRADGARRAPLPVKAIMGAVSLEMLHVATLIHDDIID 111 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQA---FCMVIETKSQEALEALSL-VACTLAE 142 + LRRG + G ++LVGD QA F ++T++ AL L L V +L Sbjct: 112 AAPLRRGIASVVGARGIDMAILVGDLQFIQAIRVFARHVDTQADMALVRLVLDVGFSLCC 171 Query: 143 GELRQLSLSK--NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 GE+ + S+ + ++ Y V KTAVLF A E+ + ++G +AL YG + Sbjct: 172 GEIDERSVDRRESIGFLRNHYFKVADRKTAVLFGLACEIGAALSGATKREIRALSQYGRD 231 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-GTKREKNFWKSTIND 259 LGIAFQ++DDV D+ GK D TLP+I A + G E + I Sbjct: 232 LGIAFQIMDDVFDFLHPQASAGKAPQADIAARCLTLPIINAMEELGDAHE----LTRIMR 287 Query: 260 GKISVEN---LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 G I+ L +A + ++ LVD A + +A D L+ L D ++++ + + Sbjct: 288 GAIAAPEPAALDRAARAVERSQGLVDAYRAARRHALQAADCLQGLADRPERRAIESIASY 347 Query: 317 CLQR 320 + R Sbjct: 348 VVDR 351 >gi|258591119|emb|CBE67414.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [NC10 bacterium 'Dutch sediment'] Length = 312 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 36/281 (12%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 I + V+Y +F+GGKRLRP+L LA + + + A AIE IHT +L+HDD+ Sbjct: 35 IHEAVRYSVFAGGKRLRPILILAATEAAGGQMEQALGAAAAIEMIHTYSLIHDDLPAMDD 94 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEAL--------------EA 132 RRG++ V+G ++L GD LL+QAF ++ E L EA Sbjct: 95 DDYRRGRLTCHKVYGEAMAILAGDALLTQAFILLSAENPPCPPLAKGGWGDLKGVYDSEA 154 Query: 133 LSLVACTLAEGE----------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +V +AE + L + +D+ YLH + KT L L V + Sbjct: 155 RLMVIREIAEAAGSKGMVGGQVVDMLQEDREIDLPTLTYLH--EHKTGALIRVCLRVGGI 212 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +A + +AL YG +G+AFQ+VDD+LD G + +GK G D R K T P +L Sbjct: 213 LASAGSEQMEALTRYGERIGLAFQIVDDILDLEGSLEVLGKQAGSDLRKKKATFPALLGI 272 Query: 243 QRGTK------REKNFWKSTINDGKISVENLKKAFIIMREN 277 + + E + D ++++ + + F++MR Sbjct: 273 EESRRWAHRLVSEAQEAVAVFGDRGVALQAIAE-FVVMRRG 312 >gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001] gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001] Length = 321 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 77/237 (32%), Positives = 122/237 (51%), Gaps = 14/237 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + ++Y + +GGKRLRP+L LA + + + A A+E IHT +L+HDD+ Sbjct: 55 ESLREAMRYSLLAGGKRLRPILCLAACELAGGESERAMPTAVALEMIHTMSLIHDDLPAM 114 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------- 136 LRRG+ V+G ++L GD LL++AF MV S E L V Sbjct: 115 DDDDLRRGRPTNHKVYGEANAILAGDALLTRAFEMVALRSSGVPPERLLAVVGELSLASG 174 Query: 137 ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A L G++ L K +D+ +Y+H+ KT L A + +LIAG +++ AL+ Sbjct: 175 APGLVGGQVVDLECEGKTVDLDTLEYIHL--HKTGALLRACVLCGALIAGAPDALLTALR 232 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +Y +G+AFQ++DD+LD +GK G+D K T P +L + +R + Sbjct: 233 TYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLTADKTTYPKLLGLEESRQRAQAL 289 >gi|268323767|emb|CBH37355.1| putative geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase ; Geranyltranstransferase ; Farnesyltranstransferase ] [uncultured archaeon] Length = 357 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 81/311 (26%), Positives = 155/311 (49%), Gaps = 30/311 (9%) Query: 34 VKYLIFSGGKRLRPM-LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +K GGKRLRP+ L + E D + + +IE + + L+HDD++D+ LRR Sbjct: 45 IKEYTLRGGKRLRPIFLIYGYKCITEDNIDAIIEASISIELMQSYLLIHDDIMDEDELRR 104 Query: 93 GK---------VAARLV-------WGNQTSVLVGDFLLSQAFCMVIETKSQE-----ALE 131 GK + A L +G ++L GD L + ++ ++ +E AL+ Sbjct: 105 GKPTFHIEYENICATLFGDDDTRKFGENIAILAGDLLEAYGIDVLTNSRFKEEYITRALQ 164 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSV 190 + + + G++ + K D+TE + L + K KTA L++ +++AG + Sbjct: 165 KYAEIVKNVGYGQILDIMSEKKKDITEAEILRIHKLKTASYTIENPLQIGAILAGAVEAD 224 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +YG+ LG+AFQ+ DD+L G ++GK +G D + GK TL ++ A +++EK Sbjct: 225 LAVMSNYGLPLGLAFQIQDDILGLFGTEEKIGKPVGSDIQEGKKTLLILHALSNCSEKEK 284 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW---- 306 S + + +++ + I+RE +L +Y G+K ++++ + S++ Sbjct: 285 GIITSALGNADVTMAEIDTIREIVRETGSL---DYSKRLVGEKIEEAIHAIERSNFRAEA 341 Query: 307 KKSLMEVVDFC 317 K+ L+++ DF Sbjct: 342 KEFLVKIADFV 352 >gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana] Length = 361 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 125/232 (53%), Gaps = 24/232 (10%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RPM+ +A ++ N + ACA+E IHT +L+HDD+ +D+ Sbjct: 98 IHESMRYSLLAGGKRIRPMMCIAACEIVGGNILNAMPAACAVEMIHTMSLVHDDLPCMDN 157 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 RRGK + V+G + +VL GD LLS +F + A + +S A GEL + Sbjct: 158 DDFRRGKPISHKVYGEEMAVLTGDALLSLSFEHI-----ATATKGVSKDRIVRAIGELAR 212 Query: 148 LSLSKNL------DVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 S+ L D+ E +Y+H+ KTA+L +++ + +++ G + + Sbjct: 213 SVGSEGLVAGQVVDILSEGADVGLDHLEYIHI--HKTAMLLESSVVIGAIMGGGSDQQIE 270 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ + ++G+ FQ+VDD+LD E+GK G+D K T P +L ++ Sbjct: 271 KLRKFARSIGLLFQVVDDILDVTKSTEELGKTAGKDLLTDKTTYPKLLGIEK 322 >gi|182677419|ref|YP_001831565.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633302|gb|ACB94076.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 310 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 113/238 (47%), Gaps = 12/238 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L + TA + G+ + A A+E IH +L+HDD+ +D+ Sbjct: 46 EAMRYASLGGGKRLRPFLLVETARLFGIEGEGVLRAASALEMIHCYSLVHDDLPALDNDD 105 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTLAE 142 LRRG+ + T++LVGD LL+ AF ++ + + E + AL+ A Sbjct: 106 LRRGRPTTHKAYDEATAILVGDGLLTYAFDVLADPATHKDPAIRIELVLALARAAGVGGM 165 Query: 143 GELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + L + T E + + KT L A+ ++ AGV R+AL +YG Sbjct: 166 VGGQVLDIEAEQAKTPHTAEAVIELQSMKTGALLHYAVIAGAIFAGVSKQTREALSAYGQ 225 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 LG AFQ+ DD+LD + +GK G+D K TL L + KR I Sbjct: 226 ALGAAFQVADDILDVEADTEALGKKAGKDADRNKATLVASLGLEAARKRRDTLSAEAI 283 >gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota subsp. sativus] Length = 365 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 127/237 (53%), Gaps = 33/237 (13%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--V 85 I + ++Y + +GGKR+RP+L++A + + G V + ACA+E IHT +L+HDD+ + Sbjct: 101 IHESMRYSLLAGGKRVRPILSIAACEL--FGGHEAVAMPSACAVEMIHTMSLMHDDLPFM 158 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS--------------QEALE 131 D+ LRRGK V+G +VL GD +L+ AF +V S +A+ Sbjct: 159 DNDDLRRGKPTNHKVYGESVAVLAGDAMLALAFHLVATETSGVSSSQVVRVIVELAKAIG 218 Query: 132 ALSLVACTL----AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A LVA + +EG+ NL + + +++H +SKTA L ++ + +++ G Sbjct: 219 AEGLVAGQIVDVCSEGD-------PNLGLKDLEFIH--RSKTAALLEGSVVMGAILGGAN 269 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + + ++ Y +G+ FQ+VDD+LD E+GK G+D K T P ++ ++ Sbjct: 270 DEEVEKVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGIEK 326 >gi|237752690|ref|ZP_04583170.1| polyprenyl synthetase [Helicobacter winghamensis ATCC BAA-430] gi|229376179|gb|EEO26270.1| polyprenyl synthetase [Helicobacter winghamensis ATCC BAA-430] Length = 306 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 10/202 (4%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK LR L L+ A + V L IE I A+LLHDDV+D + RR K + ++ Sbjct: 33 GKMLRSKLALSIA----GESEESVRLCAIIEMIQNASLLHDDVIDKATTRRNKPSVNALF 88 Query: 102 GNQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 G++ ++++GD L S+AF C + + A ++ TLA GE+ ++LS + Sbjct: 89 GDKNAIMLGDVLYSKAFSELTCFAKDYPQIPRIVANAVT--TLAIGEIEDVALSGAFNAD 146 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E YL +I+ KTA L A ++ +AG + + YG NLG+AFQ++DDVLD + Sbjct: 147 EAKYLAMIEHKTAALIEATAYAAAFLAGKDEKDARGFQIYGRNLGVAFQIIDDVLDIIAD 206 Query: 218 VNEMGKNIGEDFRNGKPTLPVI 239 +GK DF+ GK TLP + Sbjct: 207 SKTLGKPALSDFKEGKTTLPYL 228 >gi|284048214|ref|YP_003398553.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731] gi|283952435|gb|ADB47238.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731] Length = 291 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 21/244 (8%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 +L ++ + + + Y + +GGKRLRP+L +A A + +G + V +A +E IH Sbjct: 16 GYLQVRLGVGSISPVDKAMMYSVAAGGKRLRPILLMAAADAVGAKGSDFVAVAAGLEMIH 75 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA---L 130 T +L+HDD+ +D+ RRG++ V+G+ ++L GD LL+QAF +++E + + L Sbjct: 76 TYSLIHDDLPSMDNDDYRRGRLTNHKVFGDAMALLAGDGLLTQAFEVMLEQRGVDPKVLL 135 Query: 131 EALSLVA-CTLAEGELRQLSLSKNLDVTEEDY---------LHVIKSKTAVLFSAALEVS 180 E + LVA C G + + LD+T ED LH ++KT +F AA+ Sbjct: 136 EVVRLVAKCAGPTG----MVGGQALDITSEDQQLTLEQMKKLH--EAKTGAMFVAAVRGG 189 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G + + + G+AFQ+ DD+LD G+ MGK D + K T + Sbjct: 190 AMLGGADPETLRIMTHFANLFGLAFQITDDILDVEGDAKVMGKPAHSDEKLHKSTYVSLF 249 Query: 241 AFQR 244 ++ Sbjct: 250 GLEK 253 >gi|238879551|gb|EEQ43189.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor [Candida albicans WO-1] Length = 507 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 85/313 (27%), Positives = 137/313 (43%), Gaps = 62/313 (19%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + + N+ +VL GDFLL +A + ++ Sbjct: 200 LAEIVEMIHTASLLHDDVIDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIARLRN 259 Query: 127 QEALEALSLVACTLAEGE------------------------------------LRQLSL 150 E +E LS L EGE L Q S+ Sbjct: 260 PEVIELLSTTIANLVEGEFMQLKNTVLQNNNNDEIFNDGDVKSIPQPTGKVPTKLHQYSV 319 Query: 151 SK---------------------NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + N++ E YLH KTA L S + +++++G Q+ Sbjct: 320 QQQQRTTNGGDSADAAVVVDHEINVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGAQDD 379 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + + +G NLG+ FQ+VDD+LDY +GK D + G T P++ A+++ K Sbjct: 380 IIENCYQFGRNLGLCFQIVDDMLDYTSSDKTIGKPSQADLKLGLATAPILFAWKQEPKLG 439 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + G + + A + + + T+ A Y +A +LR LP+S + + Sbjct: 440 DLIARKFNQPGDVEI-----ARRAVEKYDGVAQTKEMATMYCHQALKNLRVLPESEARSA 494 Query: 310 LMEVVDFCLQRLN 322 L + + L R N Sbjct: 495 LELLTNSVLTRTN 507 >gi|299822995|ref|ZP_07054881.1| geranyltranstransferase [Listeria grayi DSM 20601] gi|299816524|gb|EFI83762.1| geranyltranstransferase [Listeria grayi DSM 20601] Length = 293 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 119/223 (53%), Gaps = 17/223 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + +GGKR+RP+L AT + L + A A+E IHT +L+HDD+ +D+ Sbjct: 35 AMRYSLEAGGKRIRPILLFATLISLRTELEKGKKTAAALEMIHTYSLIHDDLPAMDNDDY 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT----------- 139 RRGK+ V+G+ T++L GD LL+ AF ++ E +EAL A S V Sbjct: 95 RRGKLTNHKVFGDATAILAGDGLLTLAFSLLSE---EEALPAESRVKLIQLFAEHAGPEG 151 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + G+ + +++ VT E+ + + KT L +A+ ++IA + L Y Sbjct: 152 MVAGQQADIE-AEDRSVTLEELAAIHRKKTGALLKSAVLAGAIIANADAETYEKLNIYAD 210 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 N+G+AFQ+ DD+LD G+ ++GK IG D K T P +L Sbjct: 211 NIGVAFQIADDILDVVGDEQKLGKKIGMDAIMHKSTYPGLLTL 253 >gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917] gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917] Length = 315 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 86/257 (33%), Positives = 132/257 (51%), Gaps = 24/257 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDV 84 E + + ++Y + +GGKRLRP+L LA E G + L A A+E IHT +L+HDD+ Sbjct: 47 ESLREAMRYSLLAGGKRLRPILCLAA---CELAGGDPALAMPTAVALEMIHTMSLIHDDL 103 Query: 85 VDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSL 135 LRRG+ V+G ++L GD LL++AF MV + + + LSL Sbjct: 104 PAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSPGVPAERLLQVVAELSL 163 Query: 136 VACT--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 VA L G++ L S K +D+ +Y+H+ KT L A + +LIAG S Sbjct: 164 VAGAPGLVGGQVVDLESEGKQVDLETLEYIHL--HKTGALLRACVITGALIAGADASRID 221 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +L++Y +G+AFQ+VDD+LD + +GK G+D K T P +L + +R K Sbjct: 222 SLRTYARGIGLAFQIVDDILDVTASSDVLGKTAGKDLIADKTTYPKLLGLEESRQRAKAL 281 Query: 253 WKSTINDGKISVENLKK 269 + + K S+ K Sbjct: 282 ----VEEAKASLAAFKP 294 >gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus WK1] gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus WK1] Length = 290 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 25/244 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 + I + + Y + +GGKR+RP+L L+T D + +ACA+E IHT +L+HDD+ + Sbjct: 27 QTIKEAMLYSLQAGGKRIRPLLLLSTLHAFRKPIDIGMSVACALEMIHTYSLIHDDLPSM 86 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-------------QEALEA 132 D+ LRRGK V+G ++L GD LL+ AF +V + K+ +A Sbjct: 87 DNDDLRRGKPTNHKVFGEANAILAGDALLTYAFQVVADDKTISSDVKVRLISELAKAAGP 146 Query: 133 LSLVACTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +V +A EGE + +SL + +Y+H + KT L ++ +++ Sbjct: 147 EGMVGGQVADLEGEGKTISLQ------QLEYIH--RHKTGKLLQYSIRAGAILGEATEQQ 198 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L + +LG+AFQ+ DD+LD G+ ++GK +G D N K T P +L K+ Sbjct: 199 LTLLTLFADHLGLAFQIRDDILDIEGDEQKIGKKVGSDIENDKSTYPSLLTLDGAKKKLY 258 Query: 251 NFWK 254 + K Sbjct: 259 DHMK 262 >gi|260890388|ref|ZP_05901651.1| geranyltranstransferase [Leptotrichia hofstadii F0254] gi|260860008|gb|EEX74508.1| geranyltranstransferase [Leptotrichia hofstadii F0254] Length = 265 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 73/233 (31%), Positives = 126/233 (54%), Gaps = 18/233 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLE---YRGDNHVL-LACAIEFIHTATLLHDDV- 84 + + ++Y + +GGKR+RP+L + E Y+ + + +A A+EFIH +L+HDD+ Sbjct: 1 MAEAMEYAVMNGGKRIRPVLMYMICDLFEKNNYKSYDKIKEIAAALEFIHCYSLVHDDLP 60 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVA--- 137 +D+ RRGK+ + VLVGD LL++AF +V +KS + +E +S ++ Sbjct: 61 AMDNDDYRRGKLTVHKKYNEAIGVLVGDVLLTEAFGIVANSKSLGDKNKIELISKLSEYA 120 Query: 138 --CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G+ + S +K +++ Y+H KT L +AA+E+ + +++ R+ + Sbjct: 121 GFFGMVGGQFVDMESENKKVEIDTLKYIHA--HKTGKLLTAAIELPMIALNIESEKREKM 178 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 Y LGIAFQ+ DD+LD G E+GK D +N K T P I ++ K Sbjct: 179 VEYSKLLGIAFQIKDDILDIEGNFEEIGKK-SNDAQNEKTTYPSIFGLEKSKK 230 >gi|297823251|ref|XP_002879508.1| hypothetical protein ARALYDRAFT_902550 [Arabidopsis lyrata subsp. lyrata] gi|297325347|gb|EFH55767.1| hypothetical protein ARALYDRAFT_902550 [Arabidopsis lyrata subsp. lyrata] Length = 422 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 77/240 (32%), Positives = 123/240 (51%), Gaps = 19/240 (7%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALMLEYR----GDNHVLLACAI--- 71 + ++V + +Y G GK+ R +L +ATAL L G++ +++ + Sbjct: 103 VVAEVPKLASAAEYFFKRGVQGKQFRSTVLLLMATALNLRVPEALIGESTDIVSSELRVR 162 Query: 72 --------EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 E IH A+LLHDDV+DD+ RRG + +V GN+ SVL GDFLLS+A + Sbjct: 163 QRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAA 222 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 K+ E + L+ L GE +++ + + + Y+ KTA L S + + +++ Sbjct: 223 LKNTEVVALLATAVEHLVTGETMEITSTTEQRYSMDYYMQKTYYKTASLISNSCKAVAVL 282 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G V YG NLG+AFQL+DD+LD+ G +GK D R+G T P++ A + Sbjct: 283 TGQTAEVAVLAFEYGKNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAIE 342 >gi|227530530|ref|ZP_03960579.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540] gi|227349536|gb|EEJ39827.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540] Length = 290 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 81/251 (32%), Positives = 137/251 (54%), Gaps = 16/251 (6%) Query: 7 LTLKDM-EKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L LK++ E+++ + +++ SD++ + ++Y + +GGKRLRP LTL T + + + Sbjct: 2 LELKELKEQIDQFLEQQMPSDIDQPTLASSMEYSVNAGGKRLRPALTLTTVQIFGGQLNQ 61 Query: 64 HVLLA-CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 +V+ A AIE +HT +L+HDD+ +D+ LRRGK +G + L GD LL+ AF Sbjct: 62 NVMKASTAIELLHTYSLIHDDLPAMDNDDLRRGKPTNHKKFGAGMATLAGDGLLTMAFQW 121 Query: 121 V----IETKSQEALE-ALSLVA--CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVL 172 + + T++Q L AL+ A + G+ R + +NL + + YLH + KT L Sbjct: 122 LTDNQLPTETQAELTLALAKAAGPAGMVAGQARDIEGEHQNLTLEQLRYLH--RQKTGDL 179 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 S A+ +I ++ + L +G G+AFQ+ DD++D G +MGK + +D Sbjct: 180 LSYAVLAGGIITKQDSTTKNLLADFGAQFGLAFQIYDDLMDVVGTAKQMGKAVHKDASEH 239 Query: 233 KPTLPVILAFQ 243 K T P +L Q Sbjct: 240 KNTYPGLLGIQ 250 >gi|289449928|ref|YP_003475509.1| geranyltranstransferase family protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184475|gb|ADC90900.1| geranyltranstransferase family protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 336 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 13/228 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALML---------EYRGDNHVLLACAIEFIHTATLLHDD 83 + Y + +GGKRLRP L + ML E D L A+E IH +L+HDD Sbjct: 74 AITYAMLAGGKRLRPTLAVLVYEMLSRQTLPTKSETWPDALKYLIRAVESIHIYSLIHDD 133 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ +LR G+ + ++LVGD LLS+A+ +T + EA L+ A + Sbjct: 134 LPAMDNDSLRHGRPTLHTFFSEGQAILVGDALLSEAWQYATKTDNVEAGMILAQNALAMV 193 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G+ R L+ + VT +D ++K KTA L +A + ++ + ++ L + NL Sbjct: 194 HGQWRDLAFTDQ-KVTYQDLCEMVKRKTAALIAAPVLAAATLTEADAPTKRQLSQFAENL 252 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 GIAFQ+ DD+LD E MGK +G+D K T +L KRE Sbjct: 253 GIAFQIRDDILDVEAESERMGKTLGKDAAEHKTTFVKVLGMVEA-KRE 299 >gi|315186534|gb|EFU20293.1| Polyprenyl synthetase [Spirochaeta thermophila DSM 6578] Length = 327 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 5/249 (2%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 V LA A+E +H ATL+HDD+VDD+A RRG A +G + +VL+GD L ++A +V E Sbjct: 69 VRLAAALEMLHMATLVHDDIVDDAATRRGGAALHRAYGVKEAVLMGDLLFAKALELVAEY 128 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNL---DVTEEDYLHVIKSKTAVLFSAALEVSS 181 S+E LS + +GE+ ++ + + L + YL I KT +LF A + + Sbjct: 129 ASREHAVFLSRGVRHILDGEIEEVEVRRALGRESFSLRRYLRRILRKTGLLFVVAFHLGA 188 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 AG + V + L+ G N+G+AFQ++DDVLD G +GK +G D G P ++ Sbjct: 189 SEAGAEEEVVRRLRRIGYNVGMAFQVIDDVLDVAG--RGLGKPVGRDVEQGVVGAPAVML 246 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++ R + + G K ++ ++ A+ + A + +A L Sbjct: 247 ARKEGDRLGVWMRRACAGGMAGRVWAGKVRRLLVDSGAVQEARGMAQGFTDRAMREAAGL 306 Query: 302 PDSSWKKSL 310 P+ W++ L Sbjct: 307 PEGRWREVL 315 >gi|322379568|ref|ZP_08053905.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS1] gi|321147962|gb|EFX42525.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS1] Length = 301 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 79/232 (34%), Positives = 125/232 (53%), Gaps = 17/232 (7%) Query: 19 ILKRICSDVEMI--PDVVKYLIFSG-GKRLRPMLTLATALMLEYRGDNHVLLA--CAI-E 72 I RI S +E + P V+K + G GK LR L LA NH + CAI E Sbjct: 9 IQARIQSFLEEVKSPQVLKMVQNLGQGKMLRSQLILAIC-------SNHPQIVDFCAIIE 61 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 I +A+LLHDDV+D + RRG + +GN ++++GD S+AFC + S+E ++ Sbjct: 62 MIQSASLLHDDVIDHAQTRRGNPSLNATFGNTNAIMLGDVFYSKAFCE-LANFSKEIVQL 120 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 ++ L+ GE++ + + + YL I+ K+A L +A+ ++L+ G++ S Sbjct: 121 IAQSVVELSRGEIKDVQGCLAFNPNKAIYLDTIEDKSASLIAASSCGAALLQGLEPS--- 177 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + +G + G+AFQ+VDD+LD +GK DF+ GK TLP IL Q+ Sbjct: 178 KYRDFGRHFGMAFQMVDDLLDITQSQEVLGKPALSDFKEGKSTLPYILLHQK 229 >gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis] Length = 383 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 129/236 (54%), Gaps = 20/236 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKR+RP+L ++ ++ + + ACA+E IHT +L+HDD+ + Sbjct: 116 ERIHEAMRYSLLAGGKRVRPVLCISACELVGGTEEVAMPTACAMEMIHTMSLIHDDLPCM 175 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTL 140 D+ RRGK V+G T++L GD LLS AF + + S+ L +S + T+ Sbjct: 176 DNDDFRRGKPTNHKVFGEGTAILAGDALLSFAFEHIAVSTSKSVGTDRILRVVSELGRTI 235 Query: 141 AE-----GELRQLS----LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 G++ ++ S +LD E ++H KTAVL ++ ++I+G ++ Sbjct: 236 GSQGLVGGQVADITSEGDASVDLDTLEWIHIH----KTAVLLECSVMCGAIISGASDNEI 291 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + ++ Y ++G+ FQ+VDD+LD E+GK G+D + K T P ++ ++ + Sbjct: 292 ERIQRYARSVGLLFQVVDDILDVTKSSKELGKTAGKDLISDKATYPKLMGLEKAKQ 347 >gi|322379645|ref|ZP_08053966.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS5] gi|321147939|gb|EFX42518.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS5] Length = 301 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 79/232 (34%), Positives = 125/232 (53%), Gaps = 17/232 (7%) Query: 19 ILKRICSDVEMI--PDVVKYLIFSG-GKRLRPMLTLATALMLEYRGDNHVLLA--CAI-E 72 I RI S +E + P V+K + G GK LR L LA NH + CAI E Sbjct: 9 IQARIQSFLEEVKSPQVLKMVQNLGQGKMLRSQLILAIC-------SNHPQIVDFCAIIE 61 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 I +A+LLHDDV+D + RRG + +GN ++++GD S+AFC + S+E ++ Sbjct: 62 MIQSASLLHDDVIDHAQTRRGNPSLNATFGNTNAIMLGDVFYSKAFCE-LANFSKEIVQL 120 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 ++ L+ GE++ + + + YL I+ K+A L +A+ ++L+ G++ S Sbjct: 121 IAQSVVELSRGEIKDVQGCLAFNPNKAIYLDTIEDKSASLIAASSCGAALLQGLEPS--- 177 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + +G + G+AFQ+VDD+LD +GK DF+ GK TLP IL Q+ Sbjct: 178 KYRDFGRHFGMAFQMVDDLLDITQSQEVLGKPALSDFKEGKSTLPYILLHQK 229 >gi|148544405|ref|YP_001271775.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016] gi|184153768|ref|YP_001842109.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112] gi|227363170|ref|ZP_03847304.1| geranyltranstransferase [Lactobacillus reuteri MM2-3] gi|325682725|ref|ZP_08162241.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A] gi|148531439|gb|ABQ83438.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016] gi|183225112|dbj|BAG25629.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112] gi|227071776|gb|EEI10065.1| geranyltranstransferase [Lactobacillus reuteri MM2-3] gi|324977075|gb|EGC14026.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A] Length = 290 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 15/242 (6%) Query: 13 EKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLAC 69 E++ + K + +DV+ + D + Y + +GGKRLRP LTLAT ML D+ + A Sbjct: 10 EQIENYLSKSLAADVDQATLRDAMNYSLMAGGKRLRPALTLATIEMLGGTLNDDLLRAAS 69 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--- 124 A+E +HT +L+HDD+ +D+ LRRGK +G + L GD LL+ AF V + Sbjct: 70 ALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDGLLTMAFQWVADNHLP 129 Query: 125 ---KSQEALE-ALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 +SQ LE A + + G+ R + ++L + + YLH + KT L A+ Sbjct: 130 ANIRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLTLNQLRYLH--RQKTGELIRYAVLA 187 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++ ++Q L ++G N G+AFQ+ DD++D EMGK + +D K T P + Sbjct: 188 GGIMMDQSAEIKQELAAFGENYGLAFQIYDDLMDVLSTTEEMGKAVHKDADEQKNTYPGL 247 Query: 240 LA 241 L Sbjct: 248 LG 249 >gi|124800714|ref|XP_001349541.1| octaprenyl pyrophosphate synthase [Plasmodium falciparum 3D7] gi|3845103|gb|AAC71816.1| octaprenyl pyrophosphate synthase [Plasmodium falciparum 3D7] Length = 538 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DN + A E IH +LLHDDV+DDS RRG +A +GN+ S+L GD+LL++A + Sbjct: 264 DNQCKIIAASEIIHMGSLLHDDVIDDSNKRRGVIALHKKFGNKISILSGDYLLARASSIF 323 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS--KTAVLFSAALEV 179 T S + + S V +L +GE Q +L N +V E +++IKS KTA LFS Sbjct: 324 AGTGSPKICRSFSYVVESLIKGEFLQRNLKFN-NVEEALKMYLIKSYHKTASLFSHLFAC 382 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++++ +++ Q + G+++G+AFQL DD LDY+ + N K I D +N T P++ Sbjct: 383 IAILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDYKIDDN-TNKPILNDLKNNIKTAPLL 441 Query: 240 LAFQ 243 ++ Sbjct: 442 FSYN 445 >gi|270656515|ref|ZP_06222316.1| octaprenyl-diphosphate synthase [Haemophilus influenzae HK1212] gi|270317032|gb|EFA28689.1| octaprenyl-diphosphate synthase [Haemophilus influenzae HK1212] Length = 127 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 54/115 (46%), Positives = 78/115 (67%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAF 126 >gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides] Length = 288 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 122/228 (53%), Gaps = 15/228 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y I +GGKR+RP+L +A ++ + + ACA+E IHT +L+HDD+ +D+ Sbjct: 24 IHESMRYSILAGGKRVRPLLCIAACELVGGQESTAMPAACAVEMIHTMSLMHDDLPCMDN 83 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE----- 142 LRRGK +V+G +VL GD LL+ AF ++ + + + + V LA+ Sbjct: 84 DDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTGVPADRIVRVIGELAKSIGSE 143 Query: 143 ----GELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 G++ + DV E +++HV KTA L ++ + +++ G + + L+ Sbjct: 144 GLVAGQVIDICSEGMTDVGLEHLEFIHV--HKTAALLEGSVVLGAILGGATDPEVEKLRK 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + +G FQ+VDD+LD E+GK G+D K T P ++ ++ Sbjct: 202 FARCIGFLFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPKLIGLEK 249 >gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies] Length = 386 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 20/248 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 + I + ++Y + +GGKR+RP+L +A ++ + + ACAIE IHT +L+HDD+ + Sbjct: 119 QKIYESMRYSLLAGGKRVRPILCIAACELMGGTEELAMPTACAIEMIHTMSLIHDDLPYI 178 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE-----ALEALSLVA-CT 139 D+ LRRGK V+G T+++ GD LLS AF V + S+ L LS + T Sbjct: 179 DNDDLRRGKPTNHKVFGEDTAIIAGDALLSLAFEHVAVSTSRTLGTDIILRLLSEIGRAT 238 Query: 140 LAEGELR------QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 +EG + + ++D+ +++H+ KTAVL ++ +++ G + Sbjct: 239 GSEGVMGGQVVDIESEGDPSIDLETLEWVHI--HKTAVLLECSVVCGAIMGGASEDDIER 296 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 + Y +G+ FQ+VDD+LD E+GK G+D + K T P ++ G ++ K F Sbjct: 297 ARRYARCVGLLFQVVDDILDVSQSSEELGKTAGKDLISDKATYPKLM----GLEKAKEFA 352 Query: 254 KSTINDGK 261 +N GK Sbjct: 353 DELLNRGK 360 >gi|83593950|ref|YP_427702.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170] gi|83576864|gb|ABC23415.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170] Length = 305 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 18/243 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y GGKRLRP L L +A + + +A AIE IH +L+HDD+ +D+ Sbjct: 41 DAMRYAALEGGKRLRPFLVLQSAQLFSVSRACALNVAAAIEMIHCYSLIHDDLPAMDNDD 100 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALE-------ALSLVACTL 140 LRRG+ + T++L GD LL++AF ++ T S A+ A++ A + Sbjct: 101 LRRGRPTVHRQYDEPTAILAGDALLTKAFEVIALPGTHSDPAVRCDLVTELAIAAGAKGM 160 Query: 141 AEGELRQLSLSKNL-----DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G++ L + L DV +H +K+ + FS+ +++ S RQAL Sbjct: 161 VGGQMIDLMAERGLIDGALDVPAITRMHQLKTGRLISFSSI--AGAILGKAPRSQRQALF 218 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 +Y +LG+AFQ+ DD+LD G+ +GK G+D +GK T +L +R + + Sbjct: 219 NYAHDLGLAFQIADDLLDVEGDTATLGKTAGKDEASGKSTFVSLLGLERARDQADMLAEQ 278 Query: 256 TIN 258 +N Sbjct: 279 AVN 281 >gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan] Length = 373 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 118/228 (51%), Gaps = 15/228 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RPML +A ++ + + ACA+E IHT +L+HDD+ +D+ Sbjct: 109 IHESMRYSLLAGGKRIRPMLCIAACELVGGDEETAMPAACAVEMIHTMSLMHDDLPCMDN 168 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG-ELR 146 LRRGK V+G +VL GD LL+ AF + + E + V LA+ Sbjct: 169 DDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIATATKGASSEKIVRVVGELAKSIGAE 228 Query: 147 QLSLSKNLDVTEE----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L + +D+ E +++H+ KTA L ++ + +++ G L+ Sbjct: 229 GLVAGQVVDICSEGISNVGLEHLEFIHL--HKTAALLEGSVVLGAILGGGTEEEIAKLRK 286 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + N+G+ FQ+VDD+LD E+GK G+D K T P +L Q+ Sbjct: 287 FARNIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKVTYPKLLGIQK 334 >gi|307719658|ref|YP_003875190.1| heptaprenyl diphosphate synthase component II [Spirochaeta thermophila DSM 6192] gi|306533383|gb|ADN02917.1| heptaprenyl diphosphate synthase component II [Spirochaeta thermophila DSM 6192] Length = 327 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 19/260 (7%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 V LA A+E +H ATL+HDD+VDD+A RRG A +G + +VL+GD L ++A +V E Sbjct: 69 VRLAAALEMLHMATLVHDDIVDDAATRRGGAALHRAYGVKEAVLMGDLLFAKALELVAEY 128 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLD---VTEEDYLHVIKSKTAVLFSAALEVSS 181 S++ LS + +GE+ ++ + + L + YL I KT +LF A + + Sbjct: 129 ASRDHAVFLSRGVRHILDGEIEEVEVRRALGRDAFSLRRYLRRILRKTGLLFVVAFHLGA 188 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 AG + V + L+ G N+G+AFQ++DDVLD G +GK +G D G P ++ Sbjct: 189 SEAGAEEEVVRRLRRIGYNVGMAFQVIDDVLDVAG--RGLGKPVGRDVEQGVVGAPAVML 246 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT----EYRAYSYGQKAKDS 297 +R +R + + G S K R LV + E R ++ G A+ + Sbjct: 247 ARREGERLGVWMRRACAGGVASRVWAGKV------RRRLVASGAVEEARGFAQGFTAR-A 299 Query: 298 LR---CLPDSSWKKSLMEVV 314 LR LP W++ L EV+ Sbjct: 300 LREAGGLPAGRWRRVLEEVL 319 >gi|157363190|ref|YP_001469957.1| polyprenyl synthetase [Thermotoga lettingae TMO] gi|157313794|gb|ABV32893.1| Polyprenyl synthetase [Thermotoga lettingae TMO] Length = 276 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 17/249 (6%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHT 76 + R+ + M+ + Y + S GKR+RP+L L+ E G L+ A A+E HT Sbjct: 14 MTRLINKSTMVEQAMAYSLLSAGKRIRPVLI---KLICEDMGVQEDLIWNPAMAVELFHT 70 Query: 77 ATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA----- 129 A+L+HDD+ +DDS LRRG+ + +V+GN ++L GD L+ AFC++ +T + Sbjct: 71 ASLIHDDLPQIDDSPLRRGRPSCHVVFGNDMAILAGDGLMLMAFCVLNQTPADPVSKSML 130 Query: 130 LEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + S + GE + + K D+ D + + + KT LFS + +++ + Sbjct: 131 FDLFSKSTYDVLIGEAMDVEFTGKEKDIN--DVIEMYRKKTGALFSFCFAIGAILMK-KL 187 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + L + G G+ FQ+VDD+ D G+ +GK G D GKPT+ I+ Q Sbjct: 188 EYLEKLINVGSTFGVWFQIVDDLKDVSGKDENVGKTTGRDKALGKPTVVNIMGIQEAKNF 247 Query: 249 EKNFWKSTI 257 N ++S I Sbjct: 248 ADNLYESVI 256 >gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299] gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299] Length = 349 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%) Query: 28 EMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 EM P+ ++Y + +GGKR+RP L +A ++ D + ACA+E IHT +L+HDD Sbjct: 76 EMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMDVAMPTACALEMIHTMSLIHDD 135 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE--TKSQEALEALSLVA-- 137 + +D+ RRGK V+G + ++L GD LLS AF + KS A L ++ Sbjct: 136 LPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETPKSVPAERTLRVIVDV 195 Query: 138 --CTLAEGELRQLSL------SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 C +EG + + ++ +VT E ++ KT L ++ +++AG + Sbjct: 196 GKCVGSEGLVGGQVVDIMSEGAEAGEVTVETLQYIHAHKTGALLEVSVTAGAILAGAKEE 255 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + L Y +G+AFQ+VDD+LD ++GK G+D GK T P ++ + K Sbjct: 256 DVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAGKDEAVGKATYPSLVGLEESKK 313 >gi|294496102|ref|YP_003542595.1| polyprenyl synthetase [Methanohalophilus mahii DSM 5219] gi|292667101|gb|ADE36950.1| Polyprenyl synthetase [Methanohalophilus mahii DSM 5219] Length = 292 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/188 (35%), Positives = 109/188 (57%), Gaps = 3/188 (1%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 VV ++ SGGK+ RP++ L ++ + +N + A AIE IH+A+L+HDD++D LRR Sbjct: 32 VVAHICQSGGKKTRPVILLLSSRICGSEIENALDAALAIELIHSASLIHDDLLDRGVLRR 91 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS-LS 151 G A V+G ++L GD+L+S++ +I + +E +AEGE + L Sbjct: 92 GVKTAHEVYGTAAAMLAGDYLISKSI-ELISSYGKEIGTEFGRAGMEMAEGEAMDVDLLE 150 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 KN++ E Y + I+ KTA LF+A+ + + +AG + +G LG A+Q+VDD+ Sbjct: 151 KNINNRVE-YFNCIEKKTASLFAASAVMGAYVAGADEDTVSKFRLFGNKLGTAYQIVDDM 209 Query: 212 LDYRGEVN 219 L+Y +VN Sbjct: 210 LEYTTKVN 217 >gi|168335575|ref|ZP_02693638.1| Polyprenyl synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 288 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 123/220 (55%), Gaps = 19/220 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDV- 84 + + ++Y + GGKR+RP+L + L Y N CAIEF+HT +L+HDD+ Sbjct: 27 LQEAMRYSVLQGGKRIRPIL-----MRLAYEAVGGTGNIAPYMCAIEFVHTYSLIHDDLP 81 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 +D+ ALRRG + + T++L GD LL+ AF ++++ + A ++ A LA G Sbjct: 82 AMDNDALRRGLPTNHVKFDEATAILAGDGLLTLAFEIMLQDLVSDMDPAKAIAANILATG 141 Query: 144 E-LRQLSLSKNLDVTEE------DYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + L + D+ E + L I+ +KT L +AL++ +++ S AL+ Sbjct: 142 AGASGMVLGQMYDMFYEGKEISIEMLEKIQLNKTGALIKSALKMGAVLGYGSESELFALE 201 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 YG+ LG FQ++DD+LD G+VNE+GK+IG D +N K T Sbjct: 202 LYGIYLGKVFQIIDDILDITGQVNELGKDIGSDSKNKKVT 241 >gi|304393689|ref|ZP_07375617.1| geranyltranstransferase [Ahrensia sp. R2A130] gi|303294696|gb|EFL89068.1| geranyltranstransferase [Ahrensia sp. R2A130] Length = 289 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 81/227 (35%), Positives = 117/227 (51%), Gaps = 20/227 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--D 86 V +F GG R+RP LTLA A E GD+ + L A AIE +H A+L+HDD+ D Sbjct: 30 AVHSAVFPGGARVRPQLTLAVA---EACGDHEIELVDGAAAAIELLHCASLVHDDLPCFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGE 144 D+ LRRGK ++G + +VL GD L+ +AF + + +Q L AL C A G Sbjct: 87 DADLRRGKPTIHSLYGEEIAVLTGDALIIEAFNTLCASSAQHPSRLPALVAAVCA-ATGM 145 Query: 145 LRQLSLSK---NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 ++ + + DV + + H +KT LF A+ +L G S +S G + Sbjct: 146 TTGITAGQAWESEDVVDVERYHC--AKTGSLFVGAVCAGALAVG---SDPLPWRSLGSRI 200 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 G A+QL DD+LD G E GK +G+D +G+P+ L F KR Sbjct: 201 GAAYQLADDLLDALGSEEESGKPVGQDRTHGRPSAVAELGFGGTVKR 247 >gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus] Length = 372 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 123/232 (53%), Gaps = 23/232 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RPML +A ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 108 IHESMRYSLLAGGKRVRPMLCIAACELVGGLESTAMPSACAVEMIHTMSLIHDDLPCMDN 167 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-----SLVACTLAE 142 LRRGK ++G +VL GD LL+ +F V ++ + + + L C +E Sbjct: 168 DDLRRGKPTNHKIYGEDVAVLAGDALLAFSFEHVAKSTKGVSSDRIVRVIGELAKCIGSE 227 Query: 143 GELRQLSLSKNLDVTEE----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 G L + +D++ E +++HV KTA L A++ + +++ G + + Sbjct: 228 G----LVAGQVVDISSEGMTEVGLEHLEFIHV--HKTAALLEASVVLGAIVGGADDEDVE 281 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ + +G+ FQ+VDD+LD E+GK G+D K T P +L ++ Sbjct: 282 KLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPKLLGIEK 333 >gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus] Length = 369 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 137/254 (53%), Gaps = 26/254 (10%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--V 85 I + ++Y + +GGKR+RP+L +A ++ GD V + ACA+E IHT +L+HDD+ + Sbjct: 105 IHEAMRYSLLAGGKRVRPLLCIAACELV--GGDVSVAMPAACAVEMIHTMSLIHDDLPCM 162 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D+ LRRGK +G +VL GD LLS AF V + + + + LA+ Sbjct: 163 DNDDLRRGKPTNHKAFGEDIAVLAGDALLSFAFEHVAVSTVGASPDKIVRAVGELAKAVG 222 Query: 146 RQ-LSLSKNLDVTEE----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 ++ L + +D+T E +Y+HV KTAVL AA+ + +++ G + + L Sbjct: 223 KEGLVAGQVVDITSEGLNDVGLDHLEYIHV--HKTAVLLEAAVVLGAILGGGTDEEVERL 280 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + + + +G+ FQ+VDD+LD E+GK G+D K T P ++ G ++ + F + Sbjct: 281 RKFAICIGLLFQVVDDILDVTKSSVELGKTAGKDLVADKVTYPKLM----GLEKSREFAE 336 Query: 255 STINDGKISVENLK 268 +D +VE L+ Sbjct: 337 KLRDD---AVEQLR 347 >gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp. lyrata] gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp. lyrata] Length = 372 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 130/248 (52%), Gaps = 25/248 (10%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y I + GKR+RP+L LA+ ++ + + + ACA+E IHT +L+ DD+ +D+ Sbjct: 108 IHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDN 167 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVACTLAEGEL 145 LRRGK V+G ++L G LLS AF E S+ + A+ +A ++ Sbjct: 168 DDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWAVRELARSIG---T 224 Query: 146 RQLSLSKNLDVTEE------------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 R L + +D++ E +++HV KTAVL A + ++I G + ++ Sbjct: 225 RGLVAGQAMDISSEGLDLNEVGLEHLEFIHV--HKTAVLLETAAVLGAIIGGGSDEEIES 282 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 ++ + +G+ FQ+VDD+LD E+GK G+D GK T P ++ G ++ K F Sbjct: 283 VRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLTGKLTYPKLM----GLEKSKEFV 338 Query: 254 KSTINDGK 261 K D + Sbjct: 339 KRLTKDAR 346 >gi|284006403|emb|CBA71639.1| geranyltranstransferase [Arsenophonus nasoniae] Length = 302 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 16/253 (6%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 +R+ + + +KY GGKRLRP L A ML +N + A A+E IH +L Sbjct: 24 FQRLPFNQSQLVAAMKYGALLGGKRLRPFLVYAIGDMLNVAVENLDVPAAAVECIHAFSL 83 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSL 135 +HDD+ +D+ LRRG+ + +G ++L GD L + AF ++ + + + L++ Sbjct: 84 IHDDLPAMDNDNLRRGQPTCHISFGEAHAILAGDALQTLAFDILSRSAMPDVSDTYRLAM 143 Query: 136 VA----CTLAEG-----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +A T A G L S + +D T + +H KT L AA+ +S+L AG Sbjct: 144 IAELATATGAAGMCGGQALDMESEGQQIDFTTLETIH--HHKTGALIRAAIRMSALTAGN 201 Query: 187 Q-NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 Q N + L +Y +G+ FQ+ DD+LD G+ + +GKN G D ++ K T P ++ ++ Sbjct: 202 QGNKLLPLLDNYANAIGLLFQVHDDILDVTGDTDILGKNQGSDKKHKKSTYPSLIGLEQA 261 Query: 246 TKREKNFWKSTIN 258 K+ N ++ ++ Sbjct: 262 QKKANNLYEQALD 274 >gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis] Length = 387 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 133/248 (53%), Gaps = 20/248 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 + I + ++Y + +GGKR+RP+L +A ++ R + + ACA+E IHT +L+HDD+ + Sbjct: 120 QKIHESMRYSLLAGGKRVRPVLCIAACELVGGREELAMPTACAMEMIHTMSLIHDDLPCM 179 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTL 140 D+ LRRGK V+G T++L GD L + AF ++ S+ L A++ +A Sbjct: 180 DNDDLRRGKPTNHKVFGQDTALLAGDALHAFAFEHIVAFTSKSVGSDGILRAVTELARAT 239 Query: 141 AE-----GELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 G++ ++ ++ +D+ +++H+ KTAVLF A ++I G + Sbjct: 240 GPQGIMGGQIVDIASERDAFVDLQTLEWIHI--HKTAVLFECATVCGAIIGGASGDEIER 297 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 ++ + LG+ FQ+VDD+LD ++GK G+D + K T P ++ G ++ K F Sbjct: 298 IRRFARYLGLLFQVVDDILDVTKSSEDLGKTAGKDLVSDKATYPKLM----GLEKAKGFS 353 Query: 254 KSTINDGK 261 +N K Sbjct: 354 LELLNKAK 361 >gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii] Length = 363 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 75/233 (32%), Positives = 123/233 (52%), Gaps = 15/233 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DD 83 D MI + ++Y + +GGKR+RPML A ++ N + ACA+E IHT +L+H Sbjct: 95 DPPMIHEAMRYSLLAGGKRVRPMLCFAACELVGGNQGNAMAAACAVEMIHTMSLIHDDLP 154 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLVACT 139 +DD LRRGK V+G +VL GD LL+ AF I L A++ +A + Sbjct: 155 CMDDDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEYLATATIGVPPSRILVAVAELAKS 214 Query: 140 -----LAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L G++ L+ + N +V E +++H+ KTA L A++ + +++ G + Sbjct: 215 VGTEGLVAGQVADLACTGNPNVGLEMLEFIHI--HKTAALLEASVVIGAILGGGADEEVD 272 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 L+ + +G+ FQ+VDD+LD +E+GK G+D K T P +L ++ Sbjct: 273 KLRRFARCIGLLFQVVDDILDVTKSSSELGKTAGKDLAVDKTTYPKLLGLEKA 325 >gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1] gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1] Length = 315 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 12/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + +GGKR+RP+L LA A + + +A A+E IHT +L+HDD+ +D+ Sbjct: 53 EAMRYSLLAGGKRVRPILCLAAAEAVGSDPKPLLPVAGALECIHTYSLIHDDLPAMDNDD 112 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELR 146 LRRG + +G ++L GD LLS AF ++ + L L+A A R Sbjct: 113 LRRGMPTSHKKFGEAAAILAGDGLLSFAFELLARPLGEHGPGPAAQLRLLATVAAAVGPR 172 Query: 147 QLSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + LD+ E D L I + KT L +AA++ ++ G + QAL YG Sbjct: 173 GMVGGQVLDIEAEGRRLELDELQQIHRHKTGALITAAVQAGAIGGGASETQLQALTRYGQ 232 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+AFQ+VDD+L+ + +GK G D GK T P +L + Sbjct: 233 QTGLAFQIVDDLLNVTSDTATLGKAAGSDAARGKATYPALLGLE 276 >gi|331269445|ref|YP_004395937.1| polyprenyl synthetase [Clostridium botulinum BKT015925] gi|329125995|gb|AEB75940.1| Polyprenyl synthetase [Clostridium botulinum BKT015925] Length = 289 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 122/224 (54%), Gaps = 13/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D +KY I GGKR+RP+L L+T + + + + +ACAIE IHT +L+HDD+ +D+ Sbjct: 30 DSMKYSIEVGGKRIRPILMLSTYSIYKDNYKDIMPMACAIEMIHTYSLIHDDLPGMDNDD 89 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVA-CTLAEGEL 145 LRRGK V+G ++L GD LL++A ++ T + AL A +++ AEG + Sbjct: 90 LRRGKPTNHKVFGEAIAILAGDGLLNEAMNVMFNYSLTHDKVALMASKVISEAAGAEGMI 149 Query: 146 RQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +S + + + + Y+H K+KT L +++ +++ G + L +G Sbjct: 150 GGQVVDIISEGQKISIDKLKYMH--KNKTGQLIKSSIIAGAILGGASKENLEILDEFGSK 207 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+AFQ+ DD+LD G+ +GK + +D N K T ++ Sbjct: 208 LGLAFQIKDDILDVIGDSKVLGKEVHKDDENNKTTFISCFGLEK 251 >gi|317498984|ref|ZP_07957266.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893733|gb|EFV15933.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 297 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 123/233 (52%), Gaps = 15/233 (6%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAA 97 +GGKRLRPML T M +GD AIE IHT +L+HDD+ +D+ RRG+ Sbjct: 42 AGGKRLRPMLINETYQMFGGKGDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTC 101 Query: 98 RLVWGNQTSVLVGDFLL-------SQAFCMVIETKSQEALEALSLVACT-----LAEGEL 145 +V+G ++L GD LL ++AF + + + +EA+ ++A + G++ Sbjct: 102 HIVYGEDMAILAGDALLNYAYEVATKAFDLAEKDQIMNVVEAIKILASKPGIYGMIGGQV 161 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + L + ++ E L + K+KT+ L A + + +++AG ++ G +G+AF Sbjct: 162 ADVEL-EGTPLSMEQILFIHKNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAF 220 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 Q+ DD+LD G+ E+GK +G D +N K T + +R + ++ K I+ Sbjct: 221 QIQDDILDLTGDEEEIGKPVGSDEKNHKTTYVTLKGLERSQRDVEDISKKAID 273 >gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM 12885] gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM 12885] Length = 308 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 80/235 (34%), Positives = 126/235 (53%), Gaps = 19/235 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDDV-- 84 I + ++Y +GGK LRP+L +A A + E A A+E +HT +L+HDD+ Sbjct: 41 IHEAMRYSALAGGKLLRPVLVMAAARCVGGPEAVTPAVRRAAAAVELVHTYSLIHDDLPA 100 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL-VACTLAE- 142 +DD A+RRG+ A +V+G ++L GD LL+ AF ++ A A++L VA LA Sbjct: 101 MDDDAMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADPAVALAVAEELARA 160 Query: 143 --------GELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 G++ L + LD+ +H + KT LF A + + + +AG + Sbjct: 161 AGTAGLIGGQVDDLDAVQGAPLDLARLQSIH--RRKTGALFRACVRMGARLAGAGEGELE 218 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 AL +Y G AFQ+VDD+LD G+ E+GK +G D R GK T+P ++ +R + Sbjct: 219 ALTAYATAFGEAFQIVDDILDVTGDEAELGKPVGSDARRGKVTVPGLVGLERARR 273 >gi|150017812|ref|YP_001310066.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052] gi|149904277|gb|ABR35110.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052] Length = 275 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 120/215 (55%), Gaps = 12/215 (5%) Query: 18 LILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNH---VLLACA 70 +ILK I D ++ +Y GK LRP L + A A+ E D + L A Sbjct: 20 MILKNIGKDFSSGSTQEIFEYFFKVPGKYLRPSLIILSAKAINPEMTIDERMKLINLCVA 79 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE IH+A+L+HDD++D+ RRG+ ++G + +VL GD ++AF ++++ + +A Sbjct: 80 IELIHSASLVHDDIIDNDLFRRGQKTLNNIYGRKIAVLAGDAFYAKAFSILLKLPTNDAE 139 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + ++ V + E+ Q ++N ++T++DY ++I+ KTA +A ++ + + Sbjct: 140 QIITQVIEKMCVAEIEQ---AQNHEITKQDYFNIIEGKTASFMAACCKLGAKTVNAKEEE 196 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 +AL++YG+NLG+ +Q++DD D G+ N NI Sbjct: 197 IEALENYGLNLGMLYQIIDDCTD--GDSNATKNNI 229 >gi|255085660|ref|XP_002505261.1| predicted protein [Micromonas sp. RCC299] gi|226520530|gb|ACO66519.1| predicted protein [Micromonas sp. RCC299] Length = 327 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 80/243 (32%), Positives = 118/243 (48%), Gaps = 22/243 (9%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALMLEYRGDNHVL------------ 66 + S+V + +Y G GKR+RP +L +A+AL G L Sbjct: 5 VTSEVPALATAAEYFFKVGAEGKRMRPTVLLLMASALTDLSSGGADALSRARAASVPDDT 64 Query: 67 ------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 LA E IH A+LLHDDV+D +A RRG A L GN+ ++L GDFLL++A Sbjct: 65 RRRQQRLAEITELIHVASLLHDDVLDSAATRRGLRALNLEVGNKLAILAGDFLLARASVT 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + ++ E +E LS V L GE+ Q++ ++ + Y KTA L + + + Sbjct: 125 LASLRNTEVIELLSRVLEHLVTGEVMQMTAKPERLMSFDHYFQKTYFKTASLIANSAKAI 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+ G YG +LG+AFQ DDVLD+ G + +GK D + G T PV+ Sbjct: 185 VLLGGHDTETASHAYDYGRHLGLAFQFQDDVLDFVGSGSVLGKPTLGDLKEGIATAPVLF 244 Query: 241 AFQ 243 A + Sbjct: 245 AAE 247 >gi|321473072|gb|EFX84040.1| hypothetical protein DAPPUDRAFT_223125 [Daphnia pulex] Length = 378 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 20/329 (6%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 + L +D+E V I + + ++ V +Y GK +RP++TL A + Sbjct: 57 DSLVRQDVEDVYEGIREALTDTQPLLVPVAQYYFGGDGKAIRPVITLCWAKAVNCHLGKQ 116 Query: 65 VL---------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 + +E IH A L HDDV+D++ RR + + VWG + S+L GDF+L Sbjct: 117 TFRRLIQDQKRVCQVLEMIHAAGLYHDDVIDNAESRRSRPSINNVWGVKKSILAGDFVLG 176 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS---KTAVL 172 ++ ++ E +++ L+ + + GE+ QLS EE + H + KTA L Sbjct: 177 RSMRIIAEINNEDVSILLNTMIDHIVIGEIMQLSAGAT---EEERFAHYVDKTFKKTASL 233 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + + + S++AG + V+ + G LG+AFQLVDD+LD+ ++GK D G Sbjct: 234 LAHSCQAVSVLAGADSDVQAMGFTLGRQLGMAFQLVDDILDFSATSAQLGKAAAVDLTQG 293 Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292 PV+ A Q+ + + G +++ AF ++ ++ + T+ A Y Sbjct: 294 LANAPVLFAAQQFPELNPMIARRFKEPG-----DVETAFQLILQSDGMDKTKELATEYCD 348 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 A + L S +++ L + L R+ Sbjct: 349 DAVKQIAQLSSSPYQQFLFTITHKLLNRI 377 >gi|255513479|gb|EET89745.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 364 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 149/302 (49%), Gaps = 22/302 (7%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL+ GGKR+RP++TL L +++ + E +HTATL+HDD+ D S RRG Sbjct: 66 YLVEKGGKRIRPIITLLVIEALGKDPMDYIEFSMIPEILHTATLMHDDIEDGSETRRGAQ 125 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + +G ++ +GDFL +++++K + +A+ E + ++ L + D Sbjct: 126 SVYKKYGMDIALNLGDFLFFFPIKVLLDSKKLD--DAVKYRILKAHEKHMIRIGLGQATD 183 Query: 156 ------------VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 +TEE+Y+ V KT VL A E+ ++I G +++ + L + +G+ Sbjct: 184 IAWHRALTDIGKITEENYMRVAFDKTGVLLGFAAELGAIIGGAEDADVERLGKFASMIGV 243 Query: 204 AFQLVDDVLDY-RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 AFQ+ DD+L+ + E+++ IG+D + GK TL V+ A K++++ + Sbjct: 244 AFQIEDDILNITKSELSDNKGGIGDDIQEGKVTLIVVHALNHAGKKDRDRLIEILKSHTK 303 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR----CLPDSSWKKSLMEVVDFCL 318 S +K+A IM ++ ++ EY ++LR LPDS K + + + Sbjct: 304 SKIEIKEAISIMEKSGSI---EYARSVSKSIVDEALRLLDKSLPDSKGKNMMRMLASTLI 360 Query: 319 QR 320 R Sbjct: 361 NR 362 >gi|21955862|emb|CAD42868.1| solanesyl pyrophosphate synthase [Mucor circinelloides f. lusitanicus] Length = 471 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 137/262 (52%), Gaps = 14/262 (5%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D S RR +A +GN+ +VL GDFLL++A + ++ Sbjct: 214 LAEISEMIHTASLLHDDVIDASMTRRNLPSANASFGNKMAVLGGDFLLARASLALARLRN 273 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALEV 179 E +E ++ L EGE QL +K + T + Y+ KT L + + + Sbjct: 274 AECIELMATCIANLVEGEFMQLRNTKEGESGKVKKLSTFDHYMEKTYMKTGSLIAQSCKA 333 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+++ G V +G NLG+AFQLVDD+LD+ E+GK G D + G T PV+ Sbjct: 334 SAVLGGSTKEVANIAYDFGKNLGLAFQLVDDMLDFTVTAAELGKPAGADLKLGLATAPVL 393 Query: 240 LAFQRGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 A++ + E + K SV+ + +KA ++ ++ L T A + + A D+L Sbjct: 394 FAWEEYPELEPLIKR------KFSVKGDEEKARDLVYQSDGLKKTLDLAQIHCKLATDAL 447 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 LP S + +L+++ + L R Sbjct: 448 YKLPASDARSALVQITEKLLTR 469 >gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102] gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102] Length = 309 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 14/237 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + ++Y + +GGKRLRP+L LA + + A A+E IHT +L+HDD+ Sbjct: 45 ESLREAMRYSLLAGGKRLRPILCLAACELAGGDAAQAMPTAVALEMIHTMSLIHDDLPAM 104 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-------ALSLVAC 138 LRRG+ V+G ++L GD LL++AF MV E LSLVA Sbjct: 105 DDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSPGVPPERLLKVVGELSLVAG 164 Query: 139 T--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L S K +D+ +Y+H+ KT L SA + ++I G + + AL+ Sbjct: 165 APGLVGGQVVDLESEGKEVDLETLEYIHL--HKTGALLSACVITGAMIGGADDELIAALR 222 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 Y +G+AFQ++DD+LD +GK G+D K T P +L + KR + Sbjct: 223 VYARGIGLAFQIIDDILDITASSEVLGKTAGKDLIADKTTYPKLLGLEESRKRAADL 279 >gi|323448818|gb|EGB04712.1| hypothetical protein AURANDRAFT_32168 [Aureococcus anophagefferens] Length = 320 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 139/282 (49%), Gaps = 17/282 (6%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVL----LACAIEFIHTATLLHDDVVDDSALRRGKV 95 SGGK++R + L TA +G L LA IE IHTA+L HDDV+D + +RRG + Sbjct: 33 SGGKKIRATMVLLTARAFR-KGRGRSLRQRKLAEIIEIIHTASLFHDDVIDGADVRRGCL 91 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL---SLSK 152 + +G++ +VL GDFLL++A + + ++ +E +S+V L GE+ Q+ S S Sbjct: 92 SVSAKFGDKIAVLAGDFLLARACVALAKLENLAVVELISVVIEHLVRGEIVQMRPESHSS 151 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + E YLH KT L + A ++L+ + A +YG ++G+AFQLVDD L Sbjct: 152 DTHTLLEAYLHKSFYKTGSLMANACRAAALLEDETQANCDAAFAYGRHVGLAFQLVDDAL 211 Query: 213 DYRGEVNEMGKNIGEDFRNGKPT----LPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 D+ E+GK D + G T P I A + E + G + Sbjct: 212 DFEASDLELGKPALADLQMGLVTASTCAPTIFAARTSPALETILKRKFERAGDVDT---- 267 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 A I+ + + T A + A D+L LPDS +++L Sbjct: 268 -AIEIVSRSEGVQQTRDLALVQAELAVDALSKLPDSDAQRAL 308 >gi|163847417|ref|YP_001635461.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl] gi|222525266|ref|YP_002569737.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl] gi|163668706|gb|ABY35072.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl] gi|222449145|gb|ACM53411.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl] Length = 345 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 8/217 (3%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L L + LA I+ +H +L+HDD+ DDSA+RRG+ +W Sbjct: 54 GKLIRPQLVLLACAAAGGDPQQALPLAAGIQLLHDFSLIHDDIEDDSAMRRGRRTLWHIW 113 Query: 102 GNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSL------VACTLAEGELRQLSLSKN 153 G + GD F+++ + + A LS+ + + EG+ LS + Sbjct: 114 GLAHGINAGDAMFVIAHLAIHRLSERGLPAERVLSILRRFDEIILRICEGQYLDLSFEGD 173 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 L +T DYL +I KTA L + A E+ + AG AL +G +G+AFQ+ DD+L Sbjct: 174 LSITPADYLTMIGGKTAALIAGAAELGARAAGADGETVAALADFGRAVGLAFQIEDDILG 233 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 G + GK D K +LPV+ A +RE+ Sbjct: 234 IWGAPEQTGKPFAADLYRRKVSLPVVHALTHSPERER 270 >gi|9711345|dbj|BAB07816.1| geranyl geranyl diphosphate synthase [Kitasatospora griseola] Length = 348 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 4/204 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +R LT+ A V A A+E +H +LLHDDV+D RRG+ Sbjct: 65 GKMIRAALTVLAAEACGGDVQRAVCGAVAVELVHNFSLLHDDVMDGDLERRGRPTVWATL 124 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAEGELRQLSLSKNLDVTE 158 G ++L GD LL++ C ++E S+ A E L+ TLAEG++ ++ ++ Sbjct: 125 GVPAAILAGDVLLARG-CAILEGDSEHRTWATELLTETIATLAEGQMADVAFEHRTTISL 183 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 E+ L V ++KTA L S A E+ + ++G R+ L +G +LG+AFQLVDDVL G+ Sbjct: 184 EEALAVSEAKTAALLSCACELGAGLSGGGAEARERLAKFGWHLGMAFQLVDDVLGIWGDP 243 Query: 219 NEMGKNIGEDFRNGKPTLPVILAF 242 GK G D RN K ++PV A Sbjct: 244 AATGKPAGSDLRNRKKSIPVAAAM 267 >gi|171702409|dbj|BAG16276.1| geranylgeranyl diphosphate synthase [Nocardia brasiliensis] Length = 332 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 8/219 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V +Y + GK +RP+L + +A + + V +A A+E++H ATL+HDD++D LRR Sbjct: 37 VTRYAVQPPGKLVRPVLLVESAAAVGADPADLVPIAVALEYLHVATLVHDDIIDGDLLRR 96 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACT---LAEGE 144 G+ +G +++ GD LL F + E LEA+ +VA L G+ Sbjct: 97 GRPTVHARYGRDEAIVAGDALLLDTFRTLTEAAELGFPPAAVLEAVRIVAVAGLDLCRGQ 156 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L+ +L Y + KT LF AA +++ G +AL+S+ +LG A Sbjct: 157 AMEAGLAGDLYCGMARYRTMAGLKTGALFIAACAAGAVLGGGSGEEVRALRSFADHLGCA 216 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 FQ+ DD+L Y + + GK+ D N +PT PV++ + Sbjct: 217 FQMRDDLLPYLADTSRAGKSSVTDIVNQRPTFPVLVGIE 255 >gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var. palaestina] Length = 359 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 129/243 (53%), Gaps = 24/243 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDV-- 84 I + ++Y + +GGKR+RP+L +A+ E G + V +ACA+E IHT +L+HDD+ Sbjct: 96 IHEAMRYSLLAGGKRVRPILCIASC---ELVGGDPVAAHPIACALEMIHTMSLIHDDLPC 152 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE-- 142 +D+ RRG +G +T+VL GD LLS AF V + + + + V L + Sbjct: 153 MDNDDFRRGMPTNHKAFGEETAVLAGDALLSLAFEHVATRSTGVSADRVVRVIAELGKCV 212 Query: 143 -------GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G++ + S K ++++E +Y+H+ KTA+L A++ +++ G + L Sbjct: 213 GSDGLVGGQIVDIASAGKQIELSELEYIHL--HKTAILLEASVVCGAIMGGGMAPDIERL 270 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + Y +G+ FQ+VDD+LD E+GK G+D K T P ++ G + K F Sbjct: 271 RKYARYIGLLFQVVDDILDVTKSSEELGKTAGKDLATDKATYPKLM----GIDKAKEFAD 326 Query: 255 STI 257 + + Sbjct: 327 ALV 329 >gi|310779233|ref|YP_003967566.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926] gi|309748556|gb|ADO83218.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926] Length = 294 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 126/229 (55%), Gaps = 16/229 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I D +KY + +GGKRLRP+L L T +L R + + A AIE IH+ +L+HDD+ Sbjct: 29 VIADGMKYAVLNGGKRLRPILLLMTLKLLGEREEKGIPAAVAIEMIHSYSLVHDDLPALD 88 Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALSLVACT----- 139 RRGK+ +G +L+GD LL+ AF V+ +K QE A + + +V T Sbjct: 89 DDDYRRGKLTTHKKYGEAQGILIGDALLTHAFN-VLTSKDQEIDAQKIVDIVRLTSQYAG 147 Query: 140 ---LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + G++ + S K++D+ Y+H KT + S +EV+ +IAG++ ++ L Sbjct: 148 VNGMIGGQMVDIESEGKSIDLPVLQYIHT--HKTGKMISLPVEVACIIAGIEGEKKEKLI 205 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y +G+AFQ+ DD+LD G+ ++GK +G D K T P I ++ Sbjct: 206 EYSELIGLAFQIKDDILDIEGDFEKIGKPVGSDTELEKSTYPSIFGMEK 254 >gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas] Length = 370 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 121/228 (53%), Gaps = 18/228 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDDSA 89 ++Y + +GGKR+RP+L +A ++ GD + ACA+E IHT +L+HDD+ +D+ Sbjct: 111 MRYSLLAGGKRVRPILCIAACELV--GGDEAAAMPSACAMEMIHTMSLIHDDLPCMDNDD 168 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE------- 142 LRRGK ++G +T++L GD +LS AF + + E + V L Sbjct: 169 LRRGKPTNHKMFGEETAILAGDAMLSLAFEHIARATKNVSPERVVRVITELGSAVGSEGL 228 Query: 143 --GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G++ + S K ++V + +Y+H+ KTA L AA+ ++ G + + ++ Y Sbjct: 229 VAGQIVDVCSEGKEVNVKDLEYIHI--HKTAKLLEAAVVCGAIAGGADDESIERVRKYAR 286 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +G+ FQ++DD+LD E+GK G+D + K T P +L K Sbjct: 287 CIGLLFQVIDDILDVTKSSEELGKTAGKDLVSDKATYPKLLGIDEARK 334 >gi|194466515|ref|ZP_03072502.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23] gi|194453551|gb|EDX42448.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23] Length = 290 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 85/268 (31%), Positives = 135/268 (50%), Gaps = 26/268 (9%) Query: 13 EKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLAC 69 E++ + K + +DV+ + D + Y + +GGKRLRP LTLAT ML D+ + A Sbjct: 10 EQIENYLSKSLAADVDQATLRDAMNYSLMAGGKRLRPALTLATIEMLGGTINDDLLRAAS 69 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--- 124 A+E +HT +L+HDD+ +D+ LRRGK +G + L GD LL+ AF V + Sbjct: 70 ALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVADNHLP 129 Query: 125 ---KSQEALE-ALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 +SQ LE A + + G+ R + ++L + + YLH + KT L A+ Sbjct: 130 ANVRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLTLNQLRYLH--RQKTGELIRYAVLA 187 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++ ++Q L ++G N G+AFQ+ DD++D EMGK + +D K T P + Sbjct: 188 GGIMMDQSAEIKQELAAFGENYGLAFQIYDDLMDILSTTEEMGKAVHKDADEQKNTYPGL 247 Query: 240 L-----------AFQRGTKREKNFWKST 256 L A ++ +KN K T Sbjct: 248 LGVDGAKEQLQIALTAASQNQKNLEKLT 275 >gi|224476632|ref|YP_002634238.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421239|emb|CAL28053.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus TM300] Length = 292 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 82/272 (30%), Positives = 142/272 (52%), Gaps = 17/272 (6%) Query: 12 MEKVNFLILKRI-CSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--NHVLL 67 ++++N L+L+ I S ++ + + ++Y + +GGKR+RP+L + T ML D + Sbjct: 6 IKQINELLLQSIPLSPLDTNLEESMRYSLEAGGKRIRPLLLIETLKMLSNNSDYSKGLQT 65 Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A A+E +HT +L+HDD+ +D+ RRGK+ V+G ++L GD LL++AF ++ Sbjct: 66 ALALEMVHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKALLAGDALLTKAFHLISTDS 125 Query: 126 SQEALEALSLV-ACTLAEGELRQLS------LSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +A + LV + A G L + S+N + E + K KT L + A+ Sbjct: 126 LLDAEARIKLVEGLSDASGHLGMIGGQTLDMESENKQIPLETLQQIHKEKTGALLTYAIM 185 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + I N + L +Y +LG+ FQ+ DD+LD G+ +GK +G D +N K T Sbjct: 186 AAVTIVKPPNEISDILNNYSEHLGLIFQIKDDLLDVYGDEKNLGKPVGSDEKNHKNTYVT 245 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 +L G +N + +N + S+ LKK+ Sbjct: 246 LL----GQVETENKLEYHVNQAETSLAQLKKS 273 >gi|300854301|ref|YP_003779285.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528] gi|300434416|gb|ADK14183.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528] Length = 293 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 122/218 (55%), Gaps = 13/218 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-NHVL-LACAIEFIHTATLLHDDV--V 85 + + ++Y + +GGKR+RP+L L T + Y+ D N V+ +A AIE IHT +L+HDD+ + Sbjct: 32 VYEAMQYSLDAGGKRIRPLLFLLTYKL--YKTDCNEVMDIAAAIEMIHTYSLIHDDLPAM 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACTL-A 141 D+ LRRGK V+G +VL GD LL++A ++ K A+ A S+++ + A Sbjct: 90 DNDDLRRGKPTNHKVFGEAIAVLAGDGLLNEAMSLMFRHCIGKKDNAIRACSIISESAGA 149 Query: 142 EGELRQLS---LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 +G + + LS+N + + ++ KT L ++ +++ AG + L YG Sbjct: 150 DGMVGGQTVDILSENTKIPIDQLYYMHSKKTGALIKGSIISAAVYAGASKAEIDKLSYYG 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 LG+AFQ+ DD+LD G+ +GKNI D N K T Sbjct: 210 EKLGLAFQIKDDILDLTGDTALLGKNIKSDLNNNKTTF 247 >gi|256422682|ref|YP_003123335.1| polyprenyl synthetase [Chitinophaga pinensis DSM 2588] gi|256037590|gb|ACU61134.1| Polyprenyl synthetase [Chitinophaga pinensis DSM 2588] Length = 323 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 131/248 (52%), Gaps = 8/248 (3%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M +DLT++ E + + + + + D +++ GGKR+RP+L++ + + Sbjct: 1 MHSFKDLTIQFGEHFS---KEHFPKEPKKLYDAASHILNIGGKRIRPILSIMGNELFDDI 57 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + + A+E H TL+HDD++D + LRR + ++G+ ++L GD +L + + Sbjct: 58 HPDAFHVGTAVELFHNFTLVHDDIMDKAPLRRNQPTVHTLYGDTAAILAGDVMLIKVYEY 117 Query: 121 VIETKS---QEALEALSLVACTLAEGELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSA 175 + + + Q+ + A + A + EG+ + + V +DY+ +I KT+VL +A Sbjct: 118 LNKVQPHYKQKLITAFNKAAIEVCEGQQIDMDFEDMEPEQVKYDDYVKMIALKTSVLLAA 177 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +L++ ++I G + +Q + +G N+GIAFQ+ DD LD G+ + GK G D K T Sbjct: 178 SLQMGAIIGGGSDYNQQHIYEFGKNIGIAFQIQDDYLDAFGDPEKFGKQQGGDILVNKKT 237 Query: 236 LPVILAFQ 243 ++ A + Sbjct: 238 FLLLKALE 245 >gi|219848508|ref|YP_002462941.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485] gi|219542767|gb|ACL24505.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485] Length = 343 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 11/237 (4%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 I GK +RP L L + LA I+ +H +L+HDD+ DDSA+RRG+ Sbjct: 48 IADPGKLIRPQLVLLACTAAGGDPQQALPLAAGIQLLHDFSLIHDDIEDDSAMRRGRRTL 107 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSL---VACTLAEGELRQLS 149 +WG + GD + A + + ++ L L V + EG+ LS Sbjct: 108 WHIWGLAHGINAGDAMFVIAHLAIHRLADVGVPAERVLAILRRFDEVILRICEGQYLDLS 167 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 +L +T +DYL +I KTA L + A E+ + +AG + AL +G LG+ FQ+ D Sbjct: 168 FEGDLSITPDDYLTMIGGKTAALIAGAAELGARVAGAPEATVTALAEFGRALGLGFQIED 227 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFWKSTINDGKIS 263 D+L G GK D K +LP++ A RE+ + + T++D ++ Sbjct: 228 DILGIWGAPERTGKPFAADLYRRKVSLPIVHALTHSPDRERLAELYRRPTLDDAAVT 284 >gi|307595875|ref|YP_003902192.1| polyprenyl synthetase [Vulcanisaeta distributa DSM 14429] gi|307551076|gb|ADN51141.1| Polyprenyl synthetase [Vulcanisaeta distributa DSM 14429] Length = 343 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 92/345 (26%), Positives = 167/345 (48%), Gaps = 29/345 (8%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 M +LE L +++ ++K + +V E D V Y + +GGKRLRP++TL A Sbjct: 1 MDILEKLHSLYGREIDEQLIKYLSKEVSEEFRDAVIYQVSTGGKRLRPLITLTAARACG- 59 Query: 60 RGDNHVLLACA--IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 GD V L A +E IH +L++DD++D++ LRR K R +G+ ++L+G + Sbjct: 60 -GDYRVALPAAAIVELIHNYSLIYDDIIDEALLRRNKPTVRAKYGDYAAILIGIWYREAI 118 Query: 118 FCMVIETKSQEAL--EALSLVACTLAEGELRQLSLS-------------------KNLDV 156 ++ET+ A E + + + EGE + L N + Sbjct: 119 EEAILETRDPIAFARETANTIRA-IDEGERLDILLEYAGRRDPYFVENRLGPRLLSNWEA 177 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 Y+ +I KTA L A ++ A + ++ L YG LG+AFQ++DD+LD G Sbjct: 178 LYNTYVKMISLKTAALIRTAAVFGAMSANAPHCIK-PLSDYGTYLGLAFQVLDDILDIFG 236 Query: 217 EVNEMGKNIGEDFRNGK-PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 +V + GK IG+D + K V++A + +++ S + ++ +++K+A I+ Sbjct: 237 DVKKFGKEIGKDIKEHKLGNAVVVMALKELGDKDREELLSILGKTTVTNDDVKRAVEIIS 296 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + A + A + +K++ +L L + + L E++ F + R Sbjct: 297 KTNARGNALRIAMDFAEKSERALSELGSNEFVDDLREILRFTVTR 341 >gi|298674206|ref|YP_003725956.1| polyprenyl synthetase [Methanohalobium evestigatum Z-7303] gi|298287194|gb|ADI73160.1| Polyprenyl synthetase [Methanohalobium evestigatum Z-7303] Length = 288 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 108/195 (55%), Gaps = 2/195 (1%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D I +VV ++ GGKR+RP++ + + + + A A+E +H+A+L+HDD++ Sbjct: 25 DSSQIKNVVSHVCNYGGKRIRPIILMLSTDICGGDSKTSINAALAVELMHSASLIHDDLI 84 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 DD +RRG +A +G+ ++L GDFL+S++ ++ + A+ ++A GE Sbjct: 85 DDGIIRRGVPSAHKKFGHSAAMLCGDFLISKSI-ELMSSYGHNAITEFGQAGMSMAHGET 143 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 L + E +Y I KTA LF+A + + I+G + + + YG +G A+ Sbjct: 144 IDLG-GDDAGFVEVNYFDCIYKKTASLFAACASIGAYISGADDEMVHRCRLYGEYMGTAY 202 Query: 206 QLVDDVLDYRGEVNE 220 Q+VDD+L+Y E+++ Sbjct: 203 QIVDDLLEYLHEIDD 217 >gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. SG-1] gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. SG-1] Length = 295 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 75/244 (30%), Positives = 130/244 (53%), Gaps = 25/244 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + + Y + +GGKR+RP+L AT L + A A+E IHT +L+HDD+ + Sbjct: 32 EKVKEAMAYSLKAGGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLPSM 91 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---SQEALEALSLVACTLA- 141 D+ LRRGK V+G T++L GD LL+ +F ++ T +++ + +SL+A + Sbjct: 92 DNDDLRRGKPTNHKVFGEATAILAGDGLLTYSFEVLAGTPDVSAEKLIRLVSLLAKSAGP 151 Query: 142 -----------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 EGE S++L V E +Y+H K+KT L + ++ ++++A Sbjct: 152 EGMVGGQAADMEGE------SQSLSVEELEYIH--KNKTGRLLAFSVMAAAILADSTEEQ 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L+ Y ++G+AFQ+ DD+LD G ++GK +G D K T P +L + ++ + Sbjct: 204 ISLLEEYAFHIGLAFQIQDDILDVEGSEEKIGKPVGSDENKFKSTYPALLTLEGAKEKLR 263 Query: 251 NFWK 254 N + Sbjct: 264 NHLQ 267 >gi|55379709|ref|YP_137559.1| farnesyl-pyrrophosphate synthase [Haloarcula marismortui ATCC 43049] gi|55232434|gb|AAV47853.1| farnesyl-pyrrophosphate synthase [Haloarcula marismortui ATCC 43049] Length = 280 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 114/209 (54%), Gaps = 5/209 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + D V+++ SGGKR+RP +T+ L + V A IE +H A+L+ DD++D+ Sbjct: 25 EELADEVRHVALSGGKRVRPTVTVLVCEALGGEPADAVDFAVGIELVHNASLVIDDIIDE 84 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG AA +G+ +++ D LL +AF + + + A++ +S L EGE + Sbjct: 85 SELRRGSPAAWEAFGHGPAIIASDGLLGEAFNLF--STDERAMQTVSESMVELGEGEAME 142 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 L + E++Y+ + + KT LF AA E+ ++ A +A+ Y +G+AFQ+ Sbjct: 143 LVAEPS---NEKEYMELARRKTGALFRAAAELGAIAADSDPYTVEAVGQYAERVGVAFQM 199 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 DDVLD + +GK G D +P+L Sbjct: 200 RDDVLDATADAETLGKPAGTDAEMERPSL 228 >gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4] gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4] Length = 297 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 119/232 (51%), Gaps = 21/232 (9%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA-- 89 ++Y +F+GGKR+RP+L LA + GD + + ACA+E IHT +L+HDD+ Sbjct: 36 MRYSVFAGGKRIRPILMLAACDAV--GGDISLAMPAACAMEMIHTYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEAL-----SLVACTLAE 142 RRG V+G ++L GD LL++AF ++ +E + EA+ + C + Sbjct: 94 FRRGNPTNHKVFGEAIAILAGDALLTEAFILMSRVEPSASLPPEAVLRVIQEISHCAGSH 153 Query: 143 GELR------QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 G + + +D+ Y+H KT L A+++ +++ G + +L + Sbjct: 154 GMVGGQVVDMESEGKAEMDLATVQYIHT--HKTGALIKASVKAGAILGGADEARLASLTT 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 YG +G+AFQ+ DD+LD G E+GK+ G D GK T P ++ KR Sbjct: 212 YGEAIGLAFQIADDILDIEGTTEEIGKDAGSDEARGKATYPAVMGLAESKKR 263 >gi|220904228|ref|YP_002479540.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868527|gb|ACL48862.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 298 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 84/246 (34%), Positives = 124/246 (50%), Gaps = 21/246 (8%) Query: 23 ICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +C D +P +K Y + +GGKRLRP+L L+ A + + + A AIE IHT + Sbjct: 25 VCLDGRAVPQRLKDSMLYSLQAGGKRLRPVLCLSAAALCGLPLRDALPFASAIEMIHTYS 84 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALS 134 L+HDD+ LRRGK + + T++L GD LL+ AF M+ + L A+S Sbjct: 85 LVHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDGLLTDAFLMMCRSPLAPPRVLRAIS 144 Query: 135 LVACTLAEG--------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +A LA G E + K+L V+ ED + KT L A+ +++AG Sbjct: 145 ELA--LAAGSSGMVGGQEWDMIFTGKDL-VSIEDLRGIHAMKTGALLRASCVCGAMLAGA 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF--QR 244 + A+ SYG LG+AFQ+ DD+LD + +GK +G D GK T P +L R Sbjct: 202 SDEDLAAIGSYGAALGVAFQIADDILDVVADTATLGKPVGSDAAQGKKTYPALLGLDQSR 261 Query: 245 GTKREK 250 RE+ Sbjct: 262 ALAREQ 267 >gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 297 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 123/242 (50%), Gaps = 16/242 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L LA + + + ACA+E IHT +L+HDD+ + Sbjct: 33 ERIYEAMRYSLLAGGKRLRPILCLAACELAGGTVEQALPTACALEMIHTMSLIHDDLPAM 92 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----------SL 135 D+ RRGK V+G ++L GD LL+ AF I +++Q L ++ Sbjct: 93 DNDDFRRGKPTNHKVFGEDIAILAGDALLAFAFEH-IASQTQGVPPQLVLQVIARIGHAV 151 Query: 136 VACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 A L G++ L S K + + +Y+H KT L ++ ++AG + L Sbjct: 152 AATGLVGGQVVDLESEGKAISLETLEYIH--SHKTGALLEVSVVSGGILAGGDEELLAHL 209 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 Y ++G+AFQ+VDD+LD ++GK G+D K T P +L + ++ + + Sbjct: 210 SRYARDIGLAFQIVDDILDITATSEQLGKTAGKDQAAAKATYPSLLGLEASRQKAEELIQ 269 Query: 255 ST 256 S Sbjct: 270 SA 271 >gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured Desulfobacterium sp.] Length = 316 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 76/243 (31%), Positives = 132/243 (54%), Gaps = 22/243 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + S GKR+RP+L +A A + + + + ACAIE IHT +L+HDD+ +D+ L Sbjct: 55 AMEYSLISEGKRIRPILCIAAAESVGGKQSDVLPAACAIEIIHTYSLIHDDLPAIDNDLL 114 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQEALEALSLVACT----- 139 RRGK + T++L GD LL+ AF ++ E T + + L+ ++L++ Sbjct: 115 RRGKPTCHAAFNEATAILAGDALLTLAFQVLSEFELHNNTNALKWLKIINLISTAAGYMG 174 Query: 140 LAEGELRQLSLSKNLDV--TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + EG++R ++ S+N + + + LH++K T L A++E +++A + LK Y Sbjct: 175 MIEGQMRDIA-SENTQILLNKLEELHILK--TGALIVASVESGAILANASLDQIKQLKIY 231 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+L+ G+ GK +G D K T P +L G +N+ K I Sbjct: 232 AKKIGLAFQIADDLLNAMGDPTITGKPVGTDNVRKKSTYPSLL----GIDESENYAKKLI 287 Query: 258 NDG 260 + Sbjct: 288 KEA 290 >gi|52080961|ref|YP_079752.1| polyprenyl synthetase,polyprenyl synthetase [Bacillus licheniformis ATCC 14580] gi|52786337|ref|YP_092166.1| YqiD [Bacillus licheniformis ATCC 14580] gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2] gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis ATCC 14580] gi|52348839|gb|AAU41473.1| YqiD [Bacillus licheniformis ATCC 14580] gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2] Length = 296 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 76/237 (32%), Positives = 132/237 (55%), Gaps = 23/237 (9%) Query: 31 PDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNH--VLLACAIEFIHTATLLH--D 82 P ++K Y + +GGKRLRP+L L AL+ Y D + + CA+E IHT +L+H Sbjct: 30 PSILKESMLYSLEAGGKRLRPILVL--ALLHAYGKDEEAGIPVGCAVEMIHTYSLIHDDL 87 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALS-LV 136 +DD LRRGK ++G T++L GD LL+++F M+ + +++ + ++ L+ Sbjct: 88 PCMDDDDLRRGKPTNHKIYGEATAILAGDALLTESFKMITSNMPSDVSAEKRIRLVNELI 147 Query: 137 ACTLAEGE-----LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + AEG L + SK++ + E +H + KTA L S ++ +++A Sbjct: 148 SAAGAEGMVGGQILDMEAESKSVSLDELQRIH--EGKTAKLLSFSVIAGAILADASEKEI 205 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + L+ + ++GI FQ+ DD+LD G +++GK IG D NGK T P +L+ + +++ Sbjct: 206 EKLREFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSDASNGKSTYPSLLSLEGASQK 262 >gi|75250205|sp|Q94ID7|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; Flags: Precursor gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis] Length = 370 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 125/228 (54%), Gaps = 15/228 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP L LA ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 106 IHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDN 165 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEAL-----SLVAC 138 LRRGK +V+G +VL GD LL+ AF + + S + A+ ++ A Sbjct: 166 DDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAE 225 Query: 139 TLAEGELRQLSL--SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ ++ S +D+ + +++H+ KTA L A+ + +++ G + + L+ Sbjct: 226 GLVAGQVVDINSEGSSEVDLEKLEFIHI--HKTAKLLEGAVVLGAILGGGTDEEVEKLRK 283 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y ++G+ FQ+VDD+LD E+GK G+D K T P +L ++ Sbjct: 284 YARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEK 331 >gi|257053117|ref|YP_003130950.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940] gi|256691880|gb|ACV12217.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940] Length = 346 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 91/306 (29%), Positives = 150/306 (49%), Gaps = 23/306 (7%) Query: 35 KYLIFSGGKRLRPMLTLATALML--------EYR------GDNHVL-LACAIEFIHTATL 79 +YL+ +GGKRLRP + L A + YR G ++ A +IE I + TL Sbjct: 42 RYLLDAGGKRLRPTILLLVAESIADVLPRSEPYREFPAAEGPIDMMSAAVSIEIIQSFTL 101 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALS 134 +HDD++DD +RRG A + T++L GD L ++AF ++ET +S AL L+ Sbjct: 102 IHDDIMDDDDMRRGVPAVHREFDLSTAILAGDTLYAKAFENMLETGSTGDRSVRALSELA 161 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + EG+ + + VT EDYL +++ KTAVL++AA + ++ G + V L Sbjct: 162 TTCTQICEGQSMDIEFETDETVTTEDYLEMVELKTAVLYAAAASIPPILMGEDDYV-DPL 220 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 YG+N+G FQ+ DD+LD ++GK G D K T+ + A +G E Sbjct: 221 YQYGLNIGRGFQIQDDLLDLTTPSEKLGKQRGSDLVENKRTIITVHARNQGVDVENLVPT 280 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 ++ + + +A + E ++ A + K +L LPD+ + L + Sbjct: 281 DDVD--AVDEATIDEAVAELEEAGSIDFARETAEGLIRDGKRNLEVLPDNESRDLLEGIA 338 Query: 315 DFCLQR 320 DF ++R Sbjct: 339 DFLIER 344 >gi|159041215|ref|YP_001540467.1| polyprenyl synthetase [Caldivirga maquilingensis IC-167] gi|157920050|gb|ABW01477.1| Polyprenyl synthetase [Caldivirga maquilingensis IC-167] Length = 340 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 87/308 (28%), Positives = 154/308 (50%), Gaps = 22/308 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + V Y + +GGKR+RP++ + +AL ++ + A +E IH +L++DD++D++ LR Sbjct: 34 ETVLYQVATGGKRIRPLMVIESALACGGSLESALPYAAIVELIHNYSLIYDDIIDEADLR 93 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA---EGEL--- 145 R R +G+ ++LVG + V++T++ E +VA T+ EGE Sbjct: 94 RNMPTVRRKYGDYAAILVGIWYREAIEEAVLDTRNPS--EVARVVAETIKAIDEGERLDI 151 Query: 146 -------RQLSLSKNLDVTE------EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 R +N V E + Y+ +I KTA LF ++ + A N + Sbjct: 152 LMEYSGRRDPYFIENRLVREITPALRDLYIRMISLKTAALFKTSMWLGGYSAKCGNEQLE 211 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 AL ++G N+G+AFQ++DDVLD G++ + GK IG+D + K VIL +K E N Sbjct: 212 ALSNFGYNVGVAFQIIDDVLDIFGDLRKFGKEIGKDLKEHKVGNLVILLSLLESK-EANK 270 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 + ++ + + +++K+A ++ +A + A Y KA L +P + L E Sbjct: 271 LLNVLSKQRPTQDDVKEAVEVISATKAREEAIRMANEYMSKAISELSKVPRNEHTMKLEE 330 Query: 313 VVDFCLQR 320 + F + R Sbjct: 331 LAKFIVYR 338 >gi|11499146|ref|NP_070380.1| octaprenyl-diphosphate synthase (ispB) [Archaeoglobus fulgidus DSM 4304] gi|2649009|gb|AAB89695.1| octaprenyl-diphosphate synthase (ispB) [Archaeoglobus fulgidus DSM 4304] Length = 292 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 115/199 (57%), Gaps = 7/199 (3%) Query: 20 LKRICSDVEMIPDVVK---YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 LK+ VE P + K Y I +GGKR RP++ L +A + + + LA ++E IHT Sbjct: 15 LKKFVESVEATPKIKKGLAYAITAGGKRSRPVIVLLSAKLCGGDYADVMNLALSVELIHT 74 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+L+HDDV+D + RR + A + ++++GD+L+S++ + + +E + S V Sbjct: 75 ASLVHDDVIDKAEKRRKREALHKKYDISLAIVLGDWLISKSVELTSKY-GEEIIRDFSNV 133 Query: 137 ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 ++EGE+ + S+ +N TE+DY I+ KTA LF+ + + + I L Sbjct: 134 GMMMSEGEVLDIYSIKENF--TEKDYFECIEKKTAALFAYSAKSACKIVCEDRIAADKLF 191 Query: 196 SYGMNLGIAFQLVDDVLDY 214 YG+NLGIA+Q+VDD+L+Y Sbjct: 192 DYGLNLGIAYQIVDDLLEY 210 >gi|49259558|pdb|1VG6|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F132aL128AI123A Mutant Length = 299 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 110/184 (59%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E +H A+LLHDDV+D + RRGK ++G++ +V GD +L AF Sbjct: 60 GEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + +A A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEAGNNKARRAALNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|288961625|ref|YP_003451935.1| geranyltranstransferase [Azospirillum sp. B510] gi|288913905|dbj|BAI75391.1| geranyltranstransferase [Azospirillum sp. B510] Length = 300 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 19/261 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y +GGKRLRP L + ++ + D + A A+E +H+ +L+HDD+ +DD Sbjct: 40 EAMRYGCLNGGKRLRPFLVMQSSALFGVNPDCAIRAAAAVEMVHSYSLVHDDLPAMDDGE 99 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE------- 142 LRRG+ + T++L GD LL+ AF ++ + + E + LA+ Sbjct: 100 LRRGRPTCHRQFDEATAILAGDGLLTLAFEVLADPATHEDPNIRCQLVTALAKAAGGHGM 159 Query: 143 --GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G++ L + + D+ L +K+ + FS E ++ R AL++Y Sbjct: 160 VGGQMLDLIAEHETFDLGTTTRLQRLKTGEMIAFS--CEAGGILGKASPPQRTALRAYAH 217 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST--- 256 +LG+AFQ+VDD+LD G E GK +G D + GK T IL R + + Sbjct: 218 DLGLAFQIVDDLLDVEGTAEETGKTVGRDAQAGKATFVSILGRDRARAQAEMLADQAAQH 277 Query: 257 --INDGKISVENLKKAFIIMR 275 I DG+ + F++ R Sbjct: 278 LDIFDGRADMLKAVADFVVAR 298 >gi|259503553|ref|ZP_05746455.1| geranyltranstransferase [Lactobacillus antri DSM 16041] gi|259168466|gb|EEW52961.1| geranyltranstransferase [Lactobacillus antri DSM 16041] Length = 291 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 128/246 (52%), Gaps = 17/246 (6%) Query: 9 LKDMEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 LKD +V + + +D++ + ++Y +GGKRLRP LTLAT +L + D V+ Sbjct: 8 LKD--RVTAYLATHLANDIDQPTLAASMRYSTMAGGKRLRPTLTLATVEILGGQLDADVM 65 Query: 67 -LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 A A+E +HT +L+HDD+ +D+ LRRG +G + L GD LL+ AF V + Sbjct: 66 RAATALELLHTYSLIHDDLPAMDNDDLRRGAPTNHRKFGAGMATLAGDGLLTLAFQWVTD 125 Query: 124 T------KSQEALE-ALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSA 175 KS+ ALE A + + G+ R + + L + + YLH + KT L Sbjct: 126 NHLPAAVKSRLALELAKAAGPAGMVAGQARDIEGTGQQLSLDQLRYLH--RQKTGALLRY 183 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A+ +I V++ L +G + G+AFQ+ DD++D G +MGK +G+D K T Sbjct: 184 AVLAGGIITAQPEKVQRLLAQFGASYGLAFQIYDDLMDVVGTTAQMGKQVGKDAAEHKNT 243 Query: 236 LPVILA 241 P +L Sbjct: 244 YPGLLG 249 >gi|302879474|ref|YP_003848038.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] Length = 297 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 76/256 (29%), Positives = 127/256 (49%), Gaps = 18/256 (7%) Query: 19 ILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +L+R+ E+ P ++Y + GGKR+RP+L A + ++A ++E I Sbjct: 20 VLRRVLPQPEVSPQRLHQAMRYAVLEGGKRVRPLLAFAAGELTGADIARVDIVAASVELI 79 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK----SQE 128 H +L+HDD+ +DD LRRGK + + T++LVGD L + AF ++ E + Q+ Sbjct: 80 HAYSLVHDDMPCMDDDVLRRGKPTCHVQYDEATALLVGDSLQTLAFQLLTEHRLSDGPQQ 139 Query: 129 ALEALSLVACT-----LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + + L+A +A G+ L S+ K+L + E + +H+ KT L AA+ + + Sbjct: 140 QMAMIRLLASASGSRGMAGGQAIDLDSVGKSLTLPELENMHI--HKTGALIRAAVLLGAQ 197 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 V L Y +G+AFQ+VDDVLD + +GK G+D N KPT +L Sbjct: 198 CGAVSPVQLACLDHYAKCVGLAFQVVDDVLDAEADTATLGKTAGKDADNDKPTYVTLLGV 257 Query: 243 QRGTKREKNFWKSTIN 258 + N + + Sbjct: 258 TAAREMANNLHREALE 273 >gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 373 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 132/246 (53%), Gaps = 21/246 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y I + GKR+RP+L LA+ ++ + + + ACA+E IHT +L+ DD+ +D+ Sbjct: 109 IHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDN 168 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVACT-----L 140 LRRGK V+G ++L G LLS AF E S+ + A+ +A + L Sbjct: 169 DDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWAVRELARSIGTRGL 228 Query: 141 AEGELRQLSLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G+ +S S+ LD+ E +++HV KTAVL A + ++I G + ++++ Sbjct: 229 VAGQAMDIS-SEGLDLNEVGLEHLEFIHV--HKTAVLLETAAVLGAIIGGGSDEEIESVR 285 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + +G+ FQ+VDD+LD E+GK G+D GK T P ++ G ++ K F K Sbjct: 286 KFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLI----GLEKSKEFVKR 341 Query: 256 TINDGK 261 D + Sbjct: 342 LTKDAR 347 >gi|170757695|ref|YP_001781434.1| geranyltranstransferase [Clostridium botulinum B1 str. Okra] gi|169122907|gb|ACA46743.1| putative geranyltranstransferase [Clostridium botulinum B1 str. Okra] Length = 290 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 13/226 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L L T + + + +A AIE IHT +L+HDD+ +D+ Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRGK ++G ++L GD LL++A ++ E + +AL E+ Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALKACYTIAKAAEVDG 148 Query: 148 LSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + +D+ ED Y+H K KT L A++ +++ + + L YG Sbjct: 149 MIGGQVVDILSEDKSITLDELYYMH--KKKTGALIKASILAGAILGSATYTDIELLGEYG 206 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NLG+AFQ+ DD+LD G+ +GK D N K T + ++ Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEK 252 >gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2] gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2] Length = 296 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 121/239 (50%), Gaps = 18/239 (7%) Query: 20 LKRICSDVEMIPDVVKYLIFS---GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 LK + P+V + +++S GGKR+RPML A+ + A AIE +HT Sbjct: 20 LKDYVHKLNAPPEVKESMLYSLEAGGKRIRPMLLFASLAAFGEDTSKGLWTAAAIEMVHT 79 Query: 77 ATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--EALEA 132 +L+HDD+ +D+ LRRGK V+G ++L GD LL+ +F + ET + A Sbjct: 80 YSLIHDDLPSMDNDDLRRGKPTNHKVFGEAFAILAGDALLTYSFQTIAETPDEFASAETK 139 Query: 133 LSLVA----CTLAEGELRQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 LSL+ + AEG + + K L + + +Y+HV KT L ++ +++ Sbjct: 140 LSLIKELSKASGAEGMVGGQAADIKGEGKQLGLEDLEYIHV--HKTGKLLECSVVSGAIL 197 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 A QAL + +LG+AFQ+ DD+LD G +GK +G D K T P +L+ Sbjct: 198 ANASQETIQALSKFAYHLGLAFQIRDDILDLEGTEEIIGKPVGSDESKDKSTYPSLLSM 256 >gi|222055717|ref|YP_002538079.1| Polyprenyl synthetase [Geobacter sp. FRC-32] gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter sp. FRC-32] Length = 297 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 22/264 (8%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y IF+GGKR+RP+L LA + + ACA+E IHT +L+HDD+ R Sbjct: 36 MRYSIFAGGKRIRPILMLAACEAVGGNISQAMPAACAMEMIHTYSLIHDDLPAMDDDDFR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV------ACT-----L 140 RG V+G ++L GD LL++AF ++ + + +LV +C + Sbjct: 96 RGNPTNHKVFGEAVAILAGDALLTEAFILLSNLAAAPTVPPAALVQVIQEISCCAGSRGM 155 Query: 141 AEGELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++ + N +D+ Y+H KT L A+++ +L+ G + ++L YG Sbjct: 156 VGGQVVDMESEGNAEIDLATVQYIHT--HKTGALIKASVKSGALLGGASSKDAESLTRYG 213 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD G E+GK+ G D GK T P ++ R ++ Sbjct: 214 EAIGLAFQIADDILDIEGTTEEIGKDAGSDEARGKATYPAVMGLAEAKIRAAELVDIALD 273 Query: 259 -----DGKISVENLKKAFIIMREN 277 DGK ++I+ R++ Sbjct: 274 ALSAFDGKADPLREIASYIVKRKS 297 >gi|271969419|ref|YP_003343615.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM 43021] gi|270512594|gb|ACZ90872.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM 43021] Length = 326 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 144/295 (48%), Gaps = 13/295 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDD 83 S + +I + +GGKRLR LTLATAL L R DN V+ A A +E IH +L+HDD Sbjct: 35 SRLPLINGAAGRITGAGGKRLRAALTLATALALGGRIDNRVVTAAACVELIHAGSLVHDD 94 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 ++D +A RRG G+ +++VGDF+L++A + S+ L+ V LAEG Sbjct: 95 LMDKAAERRGVRTLNAELGDARALVVGDFMLARAGLAALSVVSKPVARTLASVVVELAEG 154 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + ++++ + T ED L I KTA LF A S L+A +++ YG G+ Sbjct: 155 QFQEVAELFDPGRTPEDALRSITGKTAALFRA----SCLVAHPDG---RSMAEYGERFGV 207 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 FQ++DD+LD +GK +G D R G TLP++LA Q + ++S Sbjct: 208 LFQILDDLLDLASTAERLGKPVGNDIRQGVYTLPLLLALQHDHGDLRPLLGR-----RLS 262 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + + +R R + DT A SL + D +L + C+ Sbjct: 263 EDEITALLTRLRGGRMVDDTLEYCRGLASDALSSLPVIADPEIAAALYGLPAACI 317 >gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis Ellin345] gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis Ellin345] Length = 315 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 124/222 (55%), Gaps = 18/222 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV-LLACAIEFIHTATLLHDDV--VD 86 I +++ +F+GGKRLRP+L + A M+ + V L A+E +HT +L+HDD+ +D Sbjct: 53 IHQAMRHSVFAGGKRLRPILVMEAARMITGSLPDGVDELGAALEMLHTYSLIHDDLPALD 112 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLVACTLAEGE 144 + LRRG+ + +G T++L GD L + A+ ++ + T ++ ++ + VA A G Sbjct: 113 NDDLRRGRPTCHVAFGEATAILAGDALQTYAYEVMARLRTTAEARVQIIEEVAH--ATGT 170 Query: 145 LRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + + + LD+ E +Y+H +SKT L +A++ L AG + Q ++ Sbjct: 171 IDGMIGGQVLDLEAEHTHADAATVEYIH--RSKTGALITASVVAGGLYAGADKAQVQRIR 228 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +G + G+AFQ+VDDVLD ++GK G+D ++ K T P Sbjct: 229 EFGKSAGLAFQIVDDVLDVTQTSEQLGKTAGKDTKSEKSTWP 270 >gi|49259556|pdb|1VG4|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F132aL128A MUTANT gi|49259557|pdb|1VG4|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F132aL128A MUTANT Length = 299 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 110/184 (59%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E +H A+LLHDDV+D + RRGK ++G++ +V GD +L AF Sbjct: 60 GEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + +A A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEIGNNKARRAALNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|259047925|ref|ZP_05738326.1| polyprenyl synthetase [Granulicatella adiacens ATCC 49175] gi|259035422|gb|EEW36677.1| polyprenyl synthetase [Granulicatella adiacens ATCC 49175] Length = 325 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 92/316 (29%), Positives = 162/316 (51%), Gaps = 13/316 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +++++V ++ I + + I D + ++ SGGK +RP + ++ + R VL Sbjct: 16 EELKQVKKIMRDSIQIENKAIKDAILSVLDSGGKMVRPAYLILFSMWNDNRNKEEVLAIA 75 Query: 70 AIEFI-HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQ 127 A + H ATL HDDV+D+S++RRG+ GN+ ++ GD+LL+ + ++ +K Sbjct: 76 AALELLHVATLFHDDVIDESSVRRGQETISAKLGNRVAIYAGDYLLTVCYQLLSSYSKDL 135 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ + + +GEL Q+ LDVT +DYL I+ KTA LF + S + G Q Sbjct: 136 VNIQIPTSGMMQVIQGELSQMEERYRLDVTVQDYLKRIEGKTAQLF-----MLSCVMGEQ 190 Query: 188 NSVRQA---LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 SV + + G +G++FQ++DD+LDY + ++ GK + ED G TLP+I+A Sbjct: 191 FSVLKEEARARQIGHAIGMSFQILDDILDYEIDAHQFGKPVLEDVAQGVYTLPLIMAL-- 248 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 +K+EK IS KK ++ ++ + + A Y +A + LP+ Sbjct: 249 -SKKEKELLPLLEKKELISEVERKKVQQLVLKSGGVESAKELAKKYTDRALQQIERLPEK 307 Query: 305 SWKKSLMEVVDFCLQR 320 + K L ++ LQR Sbjct: 308 NVKAMLFDITSRLLQR 323 >gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus] Length = 356 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 134/253 (52%), Gaps = 21/253 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP+L +A ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 91 IHEAMRYSLLAGGKRVRPILCIAACELVGGEEATAMPAACAVEMIHTMSLIHDDLPCMDN 150 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-------- 139 RRGK V+G +VL GD LL+ AF + ++++ A A L A Sbjct: 151 DDFRRGKPTNHKVYGEDVAVLAGDSLLAFAF-EYVSSRTEGASPARVLAAIGELAKSIGT 209 Query: 140 --LAEGELRQLSLSKNLDVT--EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ ++ + D+ + +++H+ KTA L A++ + +++ G ++ + L+ Sbjct: 210 EGLVAGQVVDIASTGGQDIGLDQLEFIHI--HKTAALLEASVVLGAILGGGSDAQVEKLR 267 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++ +G+ FQ+VDD+LD E+GK G+D K T P +L G + + F + Sbjct: 268 TFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLLVDKTTYPKLL----GLDKSRQFAEE 323 Query: 256 TINDGKISVENLK 268 + + K +E + Sbjct: 324 LLAEAKQQLEEFE 336 >gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 378 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 132/246 (53%), Gaps = 21/246 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y I + GKR+RP+L LA+ ++ + + + ACA+E IHT +L+ DD+ +D+ Sbjct: 114 IHEAMRYAILAAGKRVRPILCLASCELVGGQENATIPAACAVEMIHTMSLIKDDLPCMDN 173 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVACT-----L 140 LRRGK V+G ++L G LLS AF E S+ + A+ +A + L Sbjct: 174 DDLRRGKPTTDKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWAVRELARSIGTRGL 233 Query: 141 AEGELRQLSLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G+ +S S+ LD+ E +++HV KTAVL A + ++I G + ++++ Sbjct: 234 VAGQAMDIS-SEGLDLNEVGLEHLEFIHV--HKTAVLLETAAVLGAIIGGGSDEEIESVR 290 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + +G+ FQ+VDD+LD E+GK G+D GK T P ++ G ++ K F K Sbjct: 291 KFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLI----GLEKSKEFVKR 346 Query: 256 TINDGK 261 D + Sbjct: 347 LTKDAR 352 >gi|311896831|dbj|BAJ29239.1| putative polyprenyl diphosphate synthase [Kitasatospora setae KM-6054] Length = 362 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 105/209 (50%), Gaps = 3/209 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP + LA + R + V A A+E +H TLLHDDV+D RR + A V+ Sbjct: 78 GKSIRPAMVLAATTAVGGRPQDAVRAAAAVELVHNFTLLHDDVIDRDHTRRHRPTAWRVF 137 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CT--LAEGELRQLSLSKNLDVTE 158 G ++L GD + S A ++ E A A+ +A C L G+ S + DVT Sbjct: 138 GTTGAILAGDAMHSLALRVLAEDPHPAAAAAVRRLADCVVELCAGQQADCSFEQRTDVTL 197 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + L + + KT L A + +L AG A+ ++G +G+AFQL+DD++ G+ Sbjct: 198 AECLTMAEGKTGALLGCACALGALYAGADAETADAMDAFGREIGLAFQLIDDLIGIWGDP 257 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 GK +G D K +LPV+ A GT Sbjct: 258 AVTGKPVGADLAARKKSLPVVHALSSGTP 286 >gi|308803076|ref|XP_003078851.1| geranyl diphosphat synthase (ISS) [Ostreococcus tauri] gi|116057304|emb|CAL51731.1| geranyl diphosphat synthase (ISS) [Ostreococcus tauri] Length = 298 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 79/260 (30%), Positives = 137/260 (52%), Gaps = 11/260 (4%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IH A+LLHDDV+D++A RRG A L GN+ ++L GDFLL++A + ++ Sbjct: 42 LAEIAEMIHVASLLHDDVLDNAATRRGLRALNLEVGNKLAILAGDFLLARASVTLASLRN 101 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E +E LS V L GE+ Q++ + E Y+ KTA L + + + +L+ G Sbjct: 102 TEVIELLSRVLEHLVAGEVMQMTAKPESLSSMEHYVKKTYYKTASLIANSSKAIALLGGH 161 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 YG NLG+AFQ DDVLD+ G + +GK D + G T PV+ A + Sbjct: 162 GEKSADLAYDYGKNLGLAFQFQDDVLDFIGSESILGKPTLGDLKEGIATAPVLFAVEEFP 221 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DS 304 + ++ + + G ++++A ++++++ + T+ A + A ++ LP +S Sbjct: 222 ELQELVERRFKHSG-----DVQRAHELVKKSKGIARTQELAREHRDLAIAAIDALPVSES 276 Query: 305 SW----KKSLMEVVDFCLQR 320 S+ +++L E+ ++R Sbjct: 277 SYANKCRRALKELARRSVER 296 >gi|15224064|ref|NP_179960.1| GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2); farnesyltranstransferase [Arabidopsis thaliana] gi|75218930|sp|O04046|GGPP2_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 2; Short=GGPP synthase 2; Short=GGPS2; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2; AltName: Full=Dimethylallyltranstransferase 2; AltName: Full=Farnesyl diphosphate synthase 2; AltName: Full=Farnesyltranstransferase 2; AltName: Full=Geranyltranstransferase 2; Flags: Precursor gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana] gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana] gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana] Length = 376 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 132/246 (53%), Gaps = 21/246 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y I + GKR+RP+L LA+ ++ + + + ACA+E IHT +L+ DD+ +D+ Sbjct: 112 IHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDN 171 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVACT-----L 140 LRRGK V+G ++L G LLS AF E S+ + A+ +A + L Sbjct: 172 DDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWAVRELARSIGTRGL 231 Query: 141 AEGELRQLSLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G+ +S S+ LD+ E +++HV KTAVL A + ++I G + ++++ Sbjct: 232 VAGQAMDIS-SEGLDLNEVGLEHLEFIHV--HKTAVLLETAAVLGAIIGGGSDEEIESVR 288 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + +G+ FQ+VDD+LD E+GK G+D GK T P ++ G ++ K F K Sbjct: 289 KFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLI----GLEKSKEFVKR 344 Query: 256 TINDGK 261 D + Sbjct: 345 LTKDAR 350 >gi|253682719|ref|ZP_04863516.1| geranyltranstransferase [Clostridium botulinum D str. 1873] gi|253562431|gb|EES91883.1| geranyltranstransferase [Clostridium botulinum D str. 1873] Length = 287 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 123/220 (55%), Gaps = 13/220 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 +++ D +KY I GGKR+RP+L L+T + + + + +ACAIE IHT +L+HDD+ + Sbjct: 24 KILYDSMKYSIEVGGKRIRPILMLSTYSIYKNNYKDIMPMACAIEMIHTYSLIHDDLPGM 83 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVA-CTLA 141 D+ LRRGK V+G ++L GD LL++A ++ T + AL A +++ + A Sbjct: 84 DNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNIMFNYSLTHDKLALMASKVISEASGA 143 Query: 142 EGELRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 EG + +S + + + Y+H K+KT L +++ +++ G + L Sbjct: 144 EGMIGGQVVDIISEGQEISPDKLKYMH--KNKTGQLIKSSIIAGAILGGASKEEIEILDE 201 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +G LG+AFQ+ DD+LD G+ +GK + +D N K T Sbjct: 202 FGSKLGLAFQIKDDILDVIGDSKILGKEVHKDDENNKTTF 241 >gi|289581060|ref|YP_003479526.1| polyprenyl synthetase [Natrialba magadii ATCC 43099] gi|289530613|gb|ADD04964.1| Polyprenyl synthetase [Natrialba magadii ATCC 43099] Length = 280 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 121/230 (52%), Gaps = 10/230 (4%) Query: 12 MEKVNFLILKRICS-----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 +E+ LI +R+ D E + D V+++ SGGKR+RPM+T+ + ++ V Sbjct: 4 LERRRALIEERLHEVVDGVDPETLSDEVRHVTLSGGKRVRPMVTILACETVGGTAEDAVE 63 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 IE +H A+L+ DD++D S LRRG +A +G +++ D LL +AF + Sbjct: 64 FGVGIELVHNASLVIDDIIDRSELRRGTESAWAEFGYGPAIITSDGLLGEAFDLF--ASD 121 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +A+ ++ L GE +LS + EE+Y+ + + KT LF AA E+ ++ A Sbjct: 122 PDAMRVVTESMVELGVGEATELSAMPS---NEEEYMTLARRKTGALFRAAAELGAIAADS 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +AL Y +GIAFQ+ DDVLD + E+GK G D +P++ Sbjct: 179 DAVTVEALGEYAERVGIAFQIRDDVLDAVADAEELGKPTGHDAEMDRPSV 228 >gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium] Length = 345 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 123/231 (53%), Gaps = 22/231 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP+L LA+ ++ + + ACA+E IHT +L+HDD+ +D+ Sbjct: 82 IHESMRYSLLAGGKRVRPILCLASCELVGGDQISAMPAACAVEMIHTMSLMHDDLPCMDN 141 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-----SLVACTLAE 142 RRGK +V+G + +VL GD LLS AF V + E + L C +E Sbjct: 142 DDFRRGKPTNHIVYGEEIAVLAGDALLSFAFEHVATATKDVSAERIVRAIGELAKCIGSE 201 Query: 143 GELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 G L + +D+ E +++H+ KTA L ++ + +++ G + + Sbjct: 202 G----LVAGQVVDICSEGADVGLEHLEFIHL--HKTAALLEGSVVLGAIMGGGSDVEVER 255 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ + ++G+ FQ+VDD+LD E+GK G+D K T P +L ++ Sbjct: 256 LRKFVRSIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKTTYPKLLGIEK 306 >gi|229823651|ref|ZP_04449720.1| hypothetical protein GCWU000282_00952 [Catonella morbi ATCC 51271] gi|229786888|gb|EEP23002.1| hypothetical protein GCWU000282_00952 [Catonella morbi ATCC 51271] Length = 325 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 155/307 (50%), Gaps = 30/307 (9%) Query: 30 IPDVVKYLIF---SGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 IPDV + ++ + GK LR L LA A L E + +A AIE +H ATL+HDDV+ Sbjct: 31 IPDVREKILAYMDAPGKYLRAGLCLAMAQLTPEGITQSKRYIAAAIEVLHLATLIHDDVI 90 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE--- 142 D++ RRG A + N+ ++ GD+L++ A ++ KSQ+ + L A + Sbjct: 91 DEADTRRGIEALHIQKSNRLAIYAGDYLMTYAARLI--QKSQQEFDRNPLDAWVMEGILI 148 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL---EVSSLIAGVQNSVRQALKSYGM 199 GEL QL+ +T DYL I+ KTA+LF+AA S + +QN RQA G Sbjct: 149 GELNQLANQYRQGMTMYDYLRQIRGKTALLFAAATFFGYYSLSQSALQN--RQAF-YLGQ 205 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ------RGTKREKNFW 253 +G+AFQL DD++DY+ + GK +D +NG T P+IL Q + K W Sbjct: 206 AIGMAFQLRDDLIDYQVDAKVSGKPRMQDVQNGIYTAPLILGLQADPSLRQELKERGQPW 265 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 S + L + + + + L +TE +Y KA+ LR L ++L+ + Sbjct: 266 ---------SQQELDRLYQSLVDLGTLTETERLVDNYLAKAEKRLRGLGGKQESQALVNL 316 Query: 314 VDFCLQR 320 ++ ++R Sbjct: 317 LNQVMKR 323 >gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota] Length = 366 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 129/238 (54%), Gaps = 34/238 (14%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--V 85 I + ++Y + +GGKR+RP+L++A + + G V + ACA+E IHT +L+HDD+ + Sbjct: 101 IHESMRYSLLAGGKRVRPLLSIAACEL--FGGHEAVAMPSACAVEMIHTMSLMHDDLPFM 158 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---------------EAL 130 D+ LRRGK V+G +VL GD +L+ A ++ T+++ +A+ Sbjct: 159 DNDDLRRGKPTNHKVYGESVAVLAGDAMLALAAFHLVATETRGVSSDQVVRVIVELAKAI 218 Query: 131 EALSLVACTL----AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A LVA + +EG+ NL + + +++H +SKTA L ++ + +++ G Sbjct: 219 GAEGLVAGQIVDVCSEGD-------PNLGLEDLEFIH--RSKTAALLEGSVVMGAILGGA 269 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + + ++ Y +G+ FQ+VDD+LD E+GK G+D K T P ++ ++ Sbjct: 270 NDEEVEKVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGIEK 327 >gi|171464023|ref|YP_001798136.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193561|gb|ACB44522.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 300 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 130/257 (50%), Gaps = 22/257 (8%) Query: 20 LKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-----LACA 70 L R+ + IP + ++Y GGKR+RP+L A A L + D + A A Sbjct: 22 LDRLLDSAQTIPHRLHEAIRYAAQGGGKRIRPLLVYA-AGQLGNKSDVVPVEFLDAAAVA 80 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--S 126 IE IH +L+HDD+ +DD LRRG+ + T++LVGD L ++AF ++ T + Sbjct: 81 IECIHAYSLVHDDLPCMDDDYLRRGRPTVHKAFDEATALLVGDALQTRAFEILANTNGDA 140 Query: 127 QEALEALSLVACT-----LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 Q L +S +A +A G+ L S+ K LD+ +H +K T L S A+E+ Sbjct: 141 QVRLRMISTLAAASGSRGMAGGQAIDLESVGKKLDLQGLKQMHAMK--TGALLSCAVELG 198 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + A + + L+SY +LG+AFQ+VDDVLD + +GK G+D KPT ++ Sbjct: 199 GIAAHLNFAQMMQLQSYSKSLGLAFQIVDDVLDATADSQTLGKTAGKDAAANKPTYVTLM 258 Query: 241 AFQRGTKREKNFWKSTI 257 K+ K + I Sbjct: 259 GLDYAQKQAKELQEVAI 275 >gi|237740341|ref|ZP_04570822.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31] gi|229422358|gb|EEO37405.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31] Length = 298 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 88/277 (31%), Positives = 137/277 (49%), Gaps = 32/277 (11%) Query: 13 EKVNFLI--LKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 EK NF LK+ ++ E I ++Y + +GGKRLRP L T +L V Sbjct: 11 EKTNFFETELKKELKELSYPETIAKGMEYALLNGGKRLRPFLLFTTLELLNQDIQKGVKS 70 Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A IE IH+ +L+HDD+ +D+ RRGK+ V+G ++L+GD LL+ AF M+ Sbjct: 71 AIGIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILIGDALLTYAFYML---- 126 Query: 126 SQEALEALS------LVACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTA 170 S++ L LS +++ T A + + + +D+ E+ Y+H K KT Sbjct: 127 SEKNLNILSFEQITKIISKTSAYSGVNGMIGGQMIDIESENKKINLETLKYIH--KHKTG 184 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L +E++ +IA V R L+ Y +G+AFQ+ DD+LD G ++GK +G D Sbjct: 185 KLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFEDLGKPVGSDDD 244 Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 K T P IL G + K T+ K + N+ Sbjct: 245 LHKATYPSIL----GMEESKKILNETVERAKKIIHNM 277 >gi|154483652|ref|ZP_02026100.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC 27560] gi|149735562|gb|EDM51448.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC 27560] Length = 296 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 127/244 (52%), Gaps = 15/244 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 ++I + + Y + +GGKRLRPML L T + A+E IHT +L+HDD+ + Sbjct: 31 KIIIEAMNYSLKAGGKRLRPMLVLETLRLFGGDEKEAYPFMAAMEMIHTYSLVHDDLPAM 90 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETK-SQEALEALSLVA--- 137 D+ RRGK V+G +L GD LL+ A+ ++++K Q A A++++A Sbjct: 91 DNDMYRRGKKTTHAVYGEDIGILAGDGLLNMAYETMSMAILKSKYPQRAALAMNILAYKA 150 Query: 138 ---CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + + ++ +K D+ +++H K KTA L A+ V +++AGV + + Sbjct: 151 GIYGMIGGQTVDVINENKEKDIDTINFIH--KLKTAALIEGAMMVGAILAGVDEQAVETV 208 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + N+GIAFQ+ DD+LD G + E+GK + D +N K T + + +++ + Sbjct: 209 EEIATNVGIAFQIQDDILDVTGTLEELGKPVLSDEKNNKTTYVTLKGIDESKRLVEDYSE 268 Query: 255 STIN 258 +N Sbjct: 269 KAVN 272 >gi|282162726|ref|YP_003355111.1| polyprenyl synthetase [Methanocella paludicola SANAE] gi|282155040|dbj|BAI60128.1| polyprenyl synthetase [Methanocella paludicola SANAE] Length = 285 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 128/225 (56%), Gaps = 11/225 (4%) Query: 20 LKRICSDVEMIPDV---VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 + RI S VE+ P++ + + + + GKRLRP+ L A M R D+ A A+E IHT Sbjct: 14 IDRIISAVEL-PEIRMSIAHSLKTAGKRLRPVSVLLLAEMNGGRADDATDAALAMECIHT 72 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+L+ DD+VD+ RRG+ + +G +++ GD+L+S+A M++ ++ + A S Sbjct: 73 ASLIQDDIVDEGLKRRGEDTSHEKFGMFLAMVSGDYLISRAM-MLMSKYDEKTILAFSKA 131 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 +AEGEL + S+ TE DY+ ++ KTA++F ++ E+ + IAG + + Sbjct: 132 GLYMAEGELLDVK-SRKYKPTEADYVECVRKKTAIMFESSFEMGARIAGADEKHAELCRL 190 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 GM GIA+Q+VDD+++Y +E K+ + F LP++ A Sbjct: 191 MGMEFGIAYQIVDDLIEYTQIDDEHKKSALQSF-----ILPMVYA 230 >gi|15234534|ref|NP_195399.1| GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1); farnesyltranstransferase [Arabidopsis thaliana] gi|13432144|sp|P34802|GGPP1_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 1, chloroplastic; Short=GGPP synthase 1; Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1; AltName: Full=Dimethylallyltranstransferase 1; AltName: Full=Farnesyl diphosphate synthase 1; AltName: Full=Farnesyltranstransferase 1; AltName: Full=Geranyltranstransferase 1; Flags: Precursor gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana] Length = 371 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 123/233 (52%), Gaps = 21/233 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP+L +A ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 103 IHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDN 162 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-------- 139 LRRGK V+G +VL GD LLS AF + S + + + +V Sbjct: 163 DDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIG 222 Query: 140 ---LAEGELRQLSLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L G++ +S S+ LD+ + +++H+ KTA L A+ + +++ G + Sbjct: 223 TEGLVAGQVVDIS-SEGLDLNDVGLEHLEFIHL--HKTAALLEASAVLGAIVGGGSDDEI 279 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + L+ + +G+ FQ+VDD+LD E+GK G+D K T P I+ ++ Sbjct: 280 ERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEK 332 >gi|15553717|gb|AAL01998.1|AF408847_1 geranylgeranyl diphosphate synthase [Xanthobacter autotrophicus Py2] Length = 359 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 20/225 (8%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIH 75 L++ S ++ +++++ S GKRLRP+LTLA A+ L H +L CA+E IH Sbjct: 81 LLVPPAASHPAVLHAAMRHILLSPGKRLRPLLTLAAAIQLNA--SEHAVLDFGCALEMIH 138 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM------VIETKSQ 127 ++L+ DD+ +DD+A+RR + + +G +VL LLS+AF + V E Sbjct: 139 ASSLIVDDLPCMDDAAMRRAQPTTHVQYGEDVAVLASIGLLSRAFGVAAAAPGVSERARL 198 Query: 128 EALEALSLVACTLA--EGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 EA+ LS+ +L G+ L S ++L TE+ V + KT VLFSAA+E++ + Sbjct: 199 EAVAILSMAVGSLGLCGGQYDDLRPSPGRSLSATED----VNRRKTGVLFSAAVEIAGHV 254 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 A + LK+ ++G A+Q++DD+LD +GK++G+D Sbjct: 255 AAADETQMGHLKALAGHVGRAYQILDDILDASASSASLGKDVGKD 299 >gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum HRM2] gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum HRM2] Length = 316 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/242 (32%), Positives = 126/242 (52%), Gaps = 23/242 (9%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 + + +GGKRLRP+L LA + + ACA+E IHT +L+HDD+ +D+ LRRG Sbjct: 52 HSLMAGGKRLRPILCLAACEACSAPLEPALPAACALEMIHTYSLVHDDLPAMDNDDLRRG 111 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-----QEALEALSLVACT--------L 140 +G T++L GD LL+ AF ++ ++ + L LVA + Sbjct: 112 IPTCHRAFGESTAILAGDGLLTHAFQILSRPENLFKVFPDPGVRLELVAIISDAAGINGM 171 Query: 141 AEGELRQLSLSKNLD--VTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 EG++ + L +N D VT + L I + KT + A++ ++ AG N++ ++L Y Sbjct: 172 VEGQMLDMLL-QNADETVTSLELLTQIHTLKTGGMIRASVVAGAVSAGADNAMIESLAVY 230 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+VDD+LD G+ MGK G D N K T P + G + + + + I Sbjct: 231 AEKIGLAFQIVDDILDVEGDPTVMGKTAGSDVDNRKMTFPSFM----GLEASRKYAQEII 286 Query: 258 ND 259 N+ Sbjct: 287 NE 288 >gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753] gi|156866965|gb|EDO60337.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753] Length = 293 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 12/228 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + +GGKR+RP LTL + + ACA+E IH+ +L+HDD+ +D+S Sbjct: 31 EAMEYSLLAGGKRIRPTLTLEFCRVCGGDVQAAMPFACAVEMIHSYSLIHDDLPCMDNSD 90 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS------QEALEALSLVA-CTLAE 142 LRRG+ A + +G ++L GD LL+ AF + +S Q EA L+A AE Sbjct: 91 LRRGRPANHIQYGEDIALLAGDGLLTLAFETALSPESIKLAGAQRGAEAARLLAKAAGAE 150 Query: 143 GELRQLSLS---KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G + + +N E L + + KT L AA ++ +AG R+A Y Sbjct: 151 GMVGGQVIDLQHENQRAPIEVLLEMDRKKTGALIQAAAQMGCAVAGADQKQREAAVEYAA 210 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +G+AFQ+ DD+LD + +GK +G D +N K T +L ++ + Sbjct: 211 CVGLAFQIRDDILDVISDPETLGKPVGSDDKNEKSTYVSLLGMEKAQQ 258 >gi|108759145|ref|YP_632810.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622] gi|108463025|gb|ABF88210.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622] Length = 297 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 119/226 (52%), Gaps = 16/226 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA----CAIEFIHTATLLHDDV- 84 + + ++Y + +GGKRLRP+L LA A ++ RG +A CA+E++HT +L+HDD+ Sbjct: 37 LAEAMRYSLLAGGKRLRPVLCLAFADLVA-RGSAVSAVAGDAACALEYVHTYSLVHDDLP 95 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 +D+ RRG++ V+G ++L GD LL++AF +V E++ A +A G Sbjct: 96 AMDNDDYRRGRLTNHKVYGEAMAILAGDALLTEAFTLV--ASGPESMRAALCRELAVASG 153 Query: 144 ELRQLSLSKNLDVTEE-----DYL-HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + + LD E+ DYL + + KT L AA + L +G +Y Sbjct: 154 AAGMVG-GQVLDTAEDRPSALDYLIRMHRMKTGALIRAACRMGVLASGGDADALARADTY 212 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G +G+AFQ+ DDVLD E+GK G D G+ T P ++ + Sbjct: 213 GDAVGLAFQIADDVLDVTATAAELGKPAGADAAAGRFTFPAVVGLE 258 >gi|228992926|ref|ZP_04152850.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442] gi|228766783|gb|EEM15422.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442] Length = 297 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 131/262 (50%), Gaps = 29/262 (11%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT E + + ACA+E IHT +L+HDD Sbjct: 30 CPNV--LREAMTYSLEAGGKRLRPLLLFATLQAFEKERELGIGAACALEMIHTYSLIHDD 87 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---------ETKSQEALE- 131 + LRRGK V+G +VL GD LL+ AF +V ETK + ALE Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVVTAYHHQDISTETKLRLALEL 147 Query: 132 -----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +VA +A+ E K L+++E +Y+H K KT L A+ +++AG Sbjct: 148 AKAAGPEGMVAGQVADMEAE----GKRLELSELEYIH--KHKTGRLLEYAVLAGAVLAGA 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + Sbjct: 202 TPEQEKKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTIDEA- 260 Query: 247 KREKNFWKSTINDGKISVENLK 268 K + TI K ++ +L+ Sbjct: 261 ---KCILEETIVKAKDAIASLQ 279 >gi|327405188|ref|YP_004346026.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823] gi|327320696|gb|AEA45188.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823] Length = 329 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 118/224 (52%), Gaps = 4/224 (1%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + D +++ GKRLRP++ L A + + A AIE H TL+HDD++D + Sbjct: 35 LADSTYHIMTLEGKRLRPIMVLMAAQGFGVTTEAAMSAAIAIEVFHNFTLVHDDIMDKAL 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---ETKSQEALEALSLVACTLAEGELR 146 +RRG + +G +++ GD +L + ++I E KS +++ +A + EG+ Sbjct: 95 VRRGTITVHEKYGVDKAIVTGDAMLPHSMGLLIKGTEEKSAVLMKSFLKMAQEVMEGQQY 154 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + VT E+Y+++I+ KT+VLF A E+ +++ ++ L +G+ G+AFQ Sbjct: 155 DMEFETQEIVTVEEYMNMIRLKTSVLFGCACEIGAILGNASIEDQKKLYDFGLYTGLAFQ 214 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++DD LD G+ + GK IG D K T +I A Q +K Sbjct: 215 IMDDYLDTFGD-DTFGKRIGGDILLNKKTFLLINAMQNANGDQK 257 >gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 302 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 119/230 (51%), Gaps = 16/230 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + Y + +GGKRLRP+L +A A L D + +ACA+E +HT +L+HDD+ + Sbjct: 35 ETLSRAMDYSLMAGGKRLRPLLVVAAAEALGGSRDAAMPVACAVEMVHTYSLIHDDLPAL 94 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT------ 139 D+ RRGK V+G ++L GD LL+ AF V++ ++ + A + +A Sbjct: 95 DNDDFRRGKPTNHKVFGEAMAILAGDGLLTHAFYSVVQASRKQGVPAEASLAIVEELSRF 154 Query: 140 -----LAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G++ + + + D+ + Y+H K+ ++FS + IA +A Sbjct: 155 AGPGGMVGGQVADMQGEQGVTDLDQLRYIHEHKTGDLIVFS--VRAGGHIASGNAEQLEA 212 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 L+ YG LG AFQ+ DD+LD G+ +++GK D K T P + + Sbjct: 213 LERYGRALGHAFQIQDDILDLIGDESKLGKKTQSDVIQQKVTYPYFIGIE 262 >gi|56964228|ref|YP_175959.1| geranyltranstransferase [Bacillus clausii KSM-K16] gi|56910471|dbj|BAD64998.1| geranyltranstransferase [Bacillus clausii KSM-K16] Length = 295 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/223 (34%), Positives = 120/223 (53%), Gaps = 22/223 (9%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-----ACAIEFIHTATLLHDDVVDDSA- 89 Y + +GGKR+RP+L LA +LE N +L ACAIE +HT +L+HDD+ Sbjct: 39 YSLEAGGKRVRPVLLLA---VLEAY--NQPILHGLDTACAIEMVHTYSLVHDDLPAMDDD 93 Query: 90 -LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLVAC--------T 139 LRRG+ V+G T++L GD LL+Q+F ++ + A +S++A Sbjct: 94 DLRRGQPTNHKVFGEATAILAGDALLTQSFALIANADAPLSAKTKVSIIAALSKAAGASG 153 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + G+L + ++ +T E +V K KT L + ++E +LIAGV N R L +G Sbjct: 154 MVGGQLADM-FAEGKQLTVEQLANVHKRKTGELLAFSIEAGALIAGVSNEERSKLNEFGQ 212 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+ FQ+ DD+LD G+ +GK +G D N K T P +L Sbjct: 213 EIGLLFQIKDDILDVEGDSIAIGKPVGSDAVNNKSTYPGLLGL 255 >gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2] gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2] Length = 327 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 12/223 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y + GGKRLRP+L +A + + ACAIE IH +L+HDD+ +D+ Sbjct: 66 DAMRYAVLDGGKRLRPLLVMAACAAVNGDAATALRPACAIELIHAYSLVHDDMPCMDNDV 125 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVACT---L 140 LRRGK + +G ++L GD L + AF ++ ++ +Q L L A + Sbjct: 126 LRRGKPTVHVQYGEAQALLAGDALQALAFELLTPGDDSVDAPTQARLCRLLAQAAGYQGM 185 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 A G+ L+ S L +T + + KT L A++ + + + AL+ YG Sbjct: 186 AGGQAIDLA-SVGLPLTSAQLHEMHRLKTGALLQASVMMGAACGAASPTALAALRDYGAA 244 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+VDD+LD + +GK G+D KPT ++ Q Sbjct: 245 IGLAFQVVDDILDVTADAATLGKTAGKDAAQDKPTFVSLMGLQ 287 >gi|254671578|emb|CBA09234.1| geranyltranstransferase [Neisseria meningitidis alpha153] Length = 298 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 14/232 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + D AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGTVADAVGQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++LVGD L +QAF ++ A Sbjct: 80 IHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVGDALQTQAFDVLARPSGLPASR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G R ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSC 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|312143726|ref|YP_003995172.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus'] gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus'] Length = 294 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 84/251 (33%), Positives = 132/251 (52%), Gaps = 29/251 (11%) Query: 28 EMIPDV---VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHD 82 E+ P++ ++Y + SGGKR+RP+LTL T +L +GD L A+E IH+ +L+HD Sbjct: 29 ELAPELSEAMRYTLLSGGKRIRPILTLLTTELL--KGDYQAALKSGSALEMIHSYSLIHD 86 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 D+ +DD LRRGK LV+G ++L GD LL+ AF ++ E + + A + + Sbjct: 87 DLPAMDDDQLRRGKKTNHLVFGEAKAILAGDALLTYAFEILSELELEPAKKIKIIKLIAS 146 Query: 141 AEGELRQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV-- 190 G L + + K L + E +H +KT L A S+++GV SV Sbjct: 147 NSGMLGMVGGQTLDIDAEKKELSLAEMQKIHA--AKTGALIKA-----SVLSGVYCSVYS 199 Query: 191 ---RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++AL+ Y NLG+ FQ+VDD+LD G+ ++GK +G D + K T P +L + Sbjct: 200 RTEKEALQKYAENLGVLFQVVDDLLDVTGDTEKLGKKVGSDQKLDKSTYPKLLGVDGARE 259 Query: 248 REKNFWKSTIN 258 + K N Sbjct: 260 AAVEYAKKAKN 270 >gi|292654483|ref|YP_003534380.1| farnesyl-pyrrophosphate synthase [Haloferax volcanii DS2] gi|291370065|gb|ADE02292.1| farnesyl-pyrrophosphate synthase [Haloferax volcanii DS2] Length = 280 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 80/272 (29%), Positives = 142/272 (52%), Gaps = 20/272 (7%) Query: 20 LKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L+ + S VE + D + ++ +GGKR+RP +T+ + ++ V A +E +H A Sbjct: 15 LEEVVSAVEPSELADQLDHVALAGGKRVRPAVTILACEAVGGTPEDAVDFAVGVELVHNA 74 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +L+ DD++D S +RRG +A +G +++ D LL +AF ++ + + A S+V Sbjct: 75 SLVVDDIIDRSDIRRGTPSAWAEYGYGPAIIASDGLLGEAFALLSSSDRATRIVAESMV- 133 Query: 138 CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L EGE +L ++ N E +Y+ + KT LF AA E+ ++ A V +A Sbjct: 134 -ELGEGEATELVAVPSN----EAEYMQLAHRKTGALFRAAAELGAVAASGDAHVVEAFGD 188 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF-----QRGTKREKN 251 Y +G+AFQ+ DDVLD + E+GK G+D G+P+L + R +++ + Sbjct: 189 YAARVGVAFQIRDDVLDATADAEELGKPTGQDAEMGRPSLVQVTDLTPEEANRRARKQAD 248 Query: 252 FWKSTINDGKI----SVENLKK--AFIIMREN 277 S ++D + +E L+ F+I+RE+ Sbjct: 249 EALSALDDSGVDDSEPLEYLRDLAEFVIVRES 280 >gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp. lyrata] gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp. lyrata] Length = 379 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 123/233 (52%), Gaps = 21/233 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP+L +A ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 111 IHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDN 170 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-------- 139 LRRGK V+G +VL GD LLS AF + S + + + +V Sbjct: 171 DDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAIGELAKAIG 230 Query: 140 ---LAEGELRQLSLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L G++ +S S+ LD+ + +++H+ KTA L A+ + +++ G + Sbjct: 231 TEGLVAGQVVDIS-SEGLDLNDVGLEHLEFIHL--HKTAALLEASAVLGAIVGGGSDDEI 287 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + L+ + +G+ FQ+VDD+LD E+GK G+D K T P I+ ++ Sbjct: 288 ERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEK 340 >gi|154248054|ref|YP_001419012.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2] gi|154162139|gb|ABS69355.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2] Length = 310 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 20/225 (8%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIH 75 L++ S ++ +++++ S GKRLRP+LTLA A+ L H +L CA+E IH Sbjct: 32 LLVPPAASHPAVLHAAMRHILLSPGKRLRPLLTLAAAIQLN--ASEHAVLDFGCALEMIH 89 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM------VIETKSQ 127 ++L+ DD+ +DD+A+RR + + +G +VL LLS+AF + V E Sbjct: 90 ASSLIVDDLPCMDDAAMRRAQPTTHVQYGEDVAVLASIGLLSRAFGVAAAAPGVSERARL 149 Query: 128 EALEALSLVACTLA--EGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 EA+ LS+ +L G+ L S ++L TE+ V + KT VLFSAA+E++ + Sbjct: 150 EAVAILSMAVGSLGLCGGQYDDLRPSPGRSLSATED----VNRRKTGVLFSAAVEIAGHV 205 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 A + LK+ ++G A+Q++DD+LD +GK++G+D Sbjct: 206 AAADETQMGHLKALAGHVGRAYQILDDILDASASSASLGKDVGKD 250 >gi|299115852|emb|CBN74415.1| geranyl-diphosphate synthase [Ectocarpus siliculosus] Length = 513 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/307 (27%), Positives = 146/307 (47%), Gaps = 27/307 (8%) Query: 33 VVKYLI-FSGGKRLRPMLTLATALMLEYRGDN------------------HVLLACAIEF 73 KY GGK++RP + + LM + N + LA E Sbjct: 213 AAKYFFELDGGKKIRPTMVI---LMSQACNSNSQQVRPDVQPGTELVNPLQLRLAEITEM 269 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IH A+L HDDV+D++ RRG + V+GN+ ++L GDFLL+++ + +S E++E + Sbjct: 270 IHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLESVELM 329 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 S L +GE+ Q+ +++ E Y+ KT L + + + S+++ V++ Sbjct: 330 SAAIEHLVKGEVLQMRPTEDGGGAFEYYVRKNYYKTGSLMANSCKASAVLGQHDLEVQEV 389 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 YG +G+AFQLVDD+LD+ G +GK D R G T PV+LA ++ K Sbjct: 390 AFEYGKRVGLAFQLVDDILDFEGNTFTLGKPALNDLRQGLATAPVLLAAEQQPGLAKLIS 449 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + G + +A ++ + + + A +KA ++ L DS + +L+++ Sbjct: 450 RKFRGPGDV-----DEALELVHRSDGIARAKEVAVVQAEKAMSAILTLHDSPAQNALVQL 504 Query: 314 VDFCLQR 320 + R Sbjct: 505 AHKIVNR 511 >gi|228998970|ref|ZP_04158552.1| Geranyltranstransferase [Bacillus mycoides Rock3-17] gi|229006508|ref|ZP_04164153.1| Geranyltranstransferase [Bacillus mycoides Rock1-4] gi|228754742|gb|EEM04142.1| Geranyltranstransferase [Bacillus mycoides Rock1-4] gi|228760587|gb|EEM09551.1| Geranyltranstransferase [Bacillus mycoides Rock3-17] Length = 297 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 131/262 (50%), Gaps = 29/262 (11%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT E + + ACA+E IHT +L+HDD Sbjct: 30 CPNV--LREAMTYSLEAGGKRLRPLLLFATLQAFEKERELGIGAACALEMIHTYSLIHDD 87 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---------ETKSQEALE- 131 + LRRGK V+G +VL GD LL+ AF +V ETK + ALE Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVVTAYHHQDISTETKLRLALEL 147 Query: 132 -----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +VA +A+ E K L+++E +Y+H K KT L A+ +++AG Sbjct: 148 AKAAGPEGMVAGQVADMEAE----GKRLELSELEYIH--KHKTGRLLEYAVLAGAVLAGA 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + Sbjct: 202 TPEQEKKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTIDEA- 260 Query: 247 KREKNFWKSTINDGKISVENLK 268 K + TI K ++ +L+ Sbjct: 261 ---KCILEETIVKAKDAIASLQ 279 >gi|168184569|ref|ZP_02619233.1| geranyltranstransferase [Clostridium botulinum Bf] gi|182672379|gb|EDT84340.1| geranyltranstransferase [Clostridium botulinum Bf] Length = 290 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 121/226 (53%), Gaps = 13/226 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L L T + + + +A AIE IHT +L+HDD+ +D+ Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACT----- 139 LRRGK ++G ++L GD LL++A ++ E ++AL+A +A Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALKACYTIAKAAGVDG 148 Query: 140 LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G++ LS K++ + E Y+H K KT L A++ +++ + + L YG Sbjct: 149 MIGGQVVDILSEDKSISLDELHYMH--KKKTGALIKASILAGAILGSATYTDIELLGEYG 206 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NLG+AFQ+ DD+LD G+ +GK D N K T + + + Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYSIDK 252 >gi|237795298|ref|YP_002862850.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str. 657] gi|229262575|gb|ACQ53608.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str. 657] Length = 290 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 121/226 (53%), Gaps = 13/226 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L L T + + + +A AIE IHT +L+HDD+ +D+ Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACT----- 139 LRRGK ++G ++L GD LL++A ++ E ++AL+A +A Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALKACYTIAKAAGVDG 148 Query: 140 LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G++ LS K++ + E Y+H K KT L A++ +++ + + L YG Sbjct: 149 MIGGQVVDILSEDKSISLDELHYMH--KKKTGALIKASILAGAILGSATYTDIELLGEYG 206 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NLG+AFQ+ DD+LD G+ +GK D N K T + + + Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYSIDK 252 >gi|217968536|ref|YP_002353770.1| polyprenyl synthetase [Thauera sp. MZ1T] gi|217505863|gb|ACK52874.1| Polyprenyl synthetase [Thauera sp. MZ1T] Length = 258 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 4/206 (1%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DME+V+ +I + +DV +I VV++ I G +R RP L LA+A L + G+ LA Sbjct: 14 HDMERVDAIIRAHMNNDVALIRQVVEF-ILHGAERRRPALVLASARALGHGGERPHALAA 72 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+E IH + LHDDV + S ++GN ++L+GD L + AF M+++ E Sbjct: 73 AVELIHISLALHDDVTEASGGAADGEREGALFGNAGNILLGDLLYTSAFRMIVDLGDMEV 132 Query: 130 LEALSLVACTLAEGEL--RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + LS +AEGE+ R+L L+ T E +L + + + A LF A E +++ G Sbjct: 133 MRVLSDATNVIAEGEVAYREL-LAAPASRTPEAWLDIARRRRAKLFEAGAECMAIVHGAD 191 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLD 213 + R AL +G+++G A L + D Sbjct: 192 PAARSALARFGLHVGSAHALRSEAED 217 >gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC 15579] gi|187773137|gb|EDU36939.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC 15579] Length = 290 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 120/226 (53%), Gaps = 13/226 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L L T + + + +A AIE IHT +L+HDD+ +D+ Sbjct: 29 IYEAMAYSLEAGGKRIRPVLLLNTYALYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACT----- 139 LRRGK ++G ++L GD LL++A ++ E + AL+A +A Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGENALKACYTIAKAAGVDG 148 Query: 140 LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G++ LS K++ + E Y+H K KT L A++ +++ ++ + L YG Sbjct: 149 MIGGQVVDILSEDKSISLDELYYMH--KKKTGALIKASILAGAILGSATSTDIELLGEYG 206 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NLG+AFQ+ DD+LD G+ +GK D N K T + + Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIDK 252 >gi|308069598|ref|YP_003871203.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus polymyxa E681] gi|305858877|gb|ADM70665.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase) [Paenibacillus polymyxa E681] Length = 307 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 123/230 (53%), Gaps = 20/230 (8%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 IP V++ Y + +GGKRLRP+L +A A + + +ACA+E +HT +L+HDD+ Sbjct: 38 IPAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLP 97 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLV---- 136 RRGK+ V+G +VL GD LL+ AF +++ + + + LS+V Sbjct: 98 AMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYSIVQAGRRHGVSSDALLSIVEDLS 157 Query: 137 ----ACTLAEGELRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 A + G++ +S + + EE +++H+ K+ ++FS L I G S Sbjct: 158 EMSGARGMVGGQVADMSGEQGMTGIEELEFIHLHKTADLIIFS--LLAGGRIGGADKSQL 215 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AL+ +G +LG+AFQ+ DD+LD G+ ++MGK D K T P + Sbjct: 216 EALRRFGRDLGLAFQIQDDILDLIGDESKMGKKTQSDVEQEKVTYPYFIG 265 >gi|325067554|ref|ZP_08126227.1| Polyprenyl synthetase [Actinomyces oris K20] Length = 291 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 16/259 (6%) Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E H ATL HDDV+D++ LRRG +A+ VWGN ++L GD L+++A ++ E Sbjct: 3 VAVELTHIATLYHDDVMDEAPLRRGAPSAQTVWGNSAAILTGDVLVARA-SQLMAALGPE 61 Query: 129 ALEALSLVACTLAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A+ A + L G+L + L D + Y+ V+ KT L + + +++ G Sbjct: 62 AVMAHAKTFERLCMGQLHETLPRPAGTDPVDH-YIQVLADKTGSLIAVSARYGAMLTGAG 120 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 Q ++ +G +G+AFQL DDV+D + GK G D R G T+PV+L + Sbjct: 121 THTEQIVEEFGERIGVAFQLADDVIDLMSDSATTGKTPGTDLREGVDTMPVLLLRKALAA 180 Query: 248 REKNFWKSTI----NDGKISVEN-LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 E + I + G +S + L +RE+ L T A + +A + L L Sbjct: 181 GELDAAGQAILSRLSSGDLSDDAFLSDVVARLREHPVLARTREMAMDWAAQAVEGLEGLE 240 Query: 303 DSSWKKSLMEVVDFCLQRL 321 ++ V+D QRL Sbjct: 241 EA--------VLDGTRQRL 251 >gi|170103887|ref|XP_001883158.1| predicted protein [Laccaria bicolor S238N-H82] gi|164642039|gb|EDR06297.1| predicted protein [Laccaria bicolor S238N-H82] Length = 434 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 82/270 (30%), Positives = 132/270 (48%), Gaps = 21/270 (7%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E +HTA+LLHDDV+D S LRRG +A +G++ SVL G+F+L +A + Sbjct: 168 LAQIVEMLHTASLLHDDVIDASPLRRGAPSAPSKFGSKLSVLGGNFILGRASTALARLGD 227 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEED--------YLHVIKSKTAVLFSAALE 178 E + ++ V L EGE+ Q+ K+ DV E YL KTA L + Sbjct: 228 AEVTQLIASVISNLVEGEILQMRDVKDKDVGVEGKTKNAWTVYLQKTYLKTASLMAKGAR 287 Query: 179 VSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNE------MGKNIGEDFR 230 + ++ G + + +YG NLGIAFQL+DD+LDY +GK G D + Sbjct: 288 SAVVLGGCEEGEVWKDIAYAYGRNLGIAFQLIDDILDYESTSTPGSADLTLGKPGGADLQ 347 Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290 G T P + A++ + + + G + + A ++ + + T+ A + Sbjct: 348 LGLATGPALYAWEEFPEMGELIGRKFEGPGDVEM-----ARSLVHRSSGVHRTKLLAKEF 402 Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +KAK+ L LP+S K L+ + + + R Sbjct: 403 AEKAKEVLDELPESVAKNGLVALTEKVVGR 432 >gi|227486380|ref|ZP_03916696.1| possible trans-hexaprenyltranstransferase [Anaerococcus lactolyticus ATCC 51172] gi|227235561|gb|EEI85576.1| possible trans-hexaprenyltranstransferase [Anaerococcus lactolyticus ATCC 51172] Length = 330 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 4/228 (1%) Query: 20 LKRICSDV---EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIH 75 +K I SD + + D++K + S GK LR L ++ +LM + V+ A A+E H Sbjct: 26 IKNILSDYKSSQNLCDIIKDALTSSGKMLRTKLLISISLMGDGEISKKVISQAAAVEITH 85 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 A+L+HDD++DDS LRR + + +G +V GD+++++ F + + ++ ++ Sbjct: 86 LASLIHDDIIDDSTLRRSHKSTQAKYGKDVAVFAGDYMIAKVFSYLANENLYDEIKVIAN 145 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + GE+ Q + LD+ E++Y I KTA F + AG + + Sbjct: 146 TIKHMCNGEVGQNLIKYRLDMGEDEYFENISGKTASFFKTVCYFGARNAGFGQMDTERMV 205 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++G NLG+ FQL DD+LD GK D R G T PV+L + Sbjct: 206 AFGENLGLMFQLKDDLLDLFSNKLITGKEEFSDIREGIYTYPVLLGLK 253 >gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis] gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media] gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media] gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana] Length = 393 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 119/231 (51%), Gaps = 16/231 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKR+RP L +A ++ D + ACA+E IHT +L+HDD+ + Sbjct: 126 EKIHESMRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCM 185 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVACTL 140 D+ RRGK V+G T+VL GD LLS AF + S L +S + T+ Sbjct: 186 DNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELGKTI 245 Query: 141 AE-----GELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 G++ ++ N+D+ +++H+ KTAVL ++ ++ G Sbjct: 246 GSQGLVGGQVVDITSEGDANVDLKTLEWIHI--HKTAVLLECSVVSGGILGGATEDEIAR 303 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 ++ Y +G+ FQ+VDD+LD E+GK G+D K T P ++ ++ Sbjct: 304 IRRYARCVGLLFQVVDDILDVTKSSEELGKTAGKDLLTDKATYPKLMGLEK 354 >gi|325205345|gb|ADZ00798.1| geranyltranstransferase [Neisseria meningitidis M04-240196] Length = 298 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 14/232 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + D AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++LVGD L +QAF ++ A Sbjct: 80 IHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVGDALQTQAFDVLARPSGLPASR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G R ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSC 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus] Length = 369 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 129/234 (55%), Gaps = 19/234 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDD 83 + +MI + ++Y + +GGKR+RP+L L+ ++ GD V + ACA+E IHT +L+HDD Sbjct: 101 EPQMIHEAMRYSLLAGGKRVRPVLCLSACELV--GGDESVAMPAACAVEMIHTMSLIHDD 158 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSLVA 137 + +D+ LRRGK V+G +VL GD LL+ AF V + + + A+ +A Sbjct: 159 LPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAYAFEHVAVSTVGVPAARIIRAIGELA 218 Query: 138 CT-----LAEGELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L G++ + N+ + + +++H+ KTA L A++ + +++ G + Sbjct: 219 KSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHL--HKTAALLEASVVLGAILGGGTDEQ 276 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + L+S+ +G+ FQ VDD+LD E+GK G+D K T P ++ ++ Sbjct: 277 VEELRSFARCIGLLFQAVDDILDVTKSSQELGKTAGKDLVADKATYPRLMGIEK 330 >gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium thermophilum] Length = 292 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 13/230 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKRLRP+L LA + +ACA E +HT +L+HDD+ +D+ Sbjct: 31 IHEAMRYSLMAGGKRLRPILVLAAGEAFGGAPERLYPVACAFEMVHTYSLIHDDLPAMDN 90 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRG + T++L GD L++ AF ++ E + + + + G + Sbjct: 91 DDLRRGMPTCHKQFDEATAILAGDGLMTHAFRILAEMDAPAEQKVRVIRELAVGSGTVEG 150 Query: 148 LSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + +D+ E ++H ++KT L A+ ++AG S L +YG Sbjct: 151 MIAGQIVDLEAERKPIDAERLKFIH--RAKTGALIRGAVVCGGIVAGATESDLALLAAYG 208 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +G+AFQ+ DD+LD ++GK G+D GK T P + + K+ Sbjct: 209 DRVGLAFQIADDILDETATAEQLGKTPGKDAAAGKATYPALYGLEASRKQ 258 >gi|46015921|pdb|1V4H|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F52a Mutant Length = 299 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 118/204 (57%), Gaps = 6/204 (2%) Query: 42 GKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GK LR L++ +A G++ + A+E +H A+LLHDDV+D + RRGK + Sbjct: 40 GKMLRVRLSILSAKNRGVEIGEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFM 99 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G++ +V GD +L AF V E + + A V ++E EL + LS+ +T+E+ Sbjct: 100 YGDKAAVAAGDLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIE-QLSRYKPITKEE 158 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 YL +++ K+ LF AL++ +L+ G + + L + G+ +G +Q+ DD++D+ G + + Sbjct: 159 YLRIVEGKSGALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEK 214 Query: 221 MGKNIGEDFRNGKPTLPVILAFQR 244 +GK+ D +NG + P++ A ++ Sbjct: 215 IGKDGFLDLKNGVASFPLVTAMEK 238 >gi|257784150|ref|YP_003179367.1| Polyprenyl synthetase [Atopobium parvulum DSM 20469] gi|257472657|gb|ACV50776.1| Polyprenyl synthetase [Atopobium parvulum DSM 20469] Length = 347 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 144/295 (48%), Gaps = 18/295 (6%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGKR+RP+L A + + + + CAIE +A L+HDD+ D S LRRG+ Sbjct: 55 GGGKRVRPVLCCLGAEAVGGSAEAALPVGCAIEDFQSAALIHDDIADKSELRRGEKCLYK 114 Query: 100 VWGNQTSVLVGDFLLSQAFCMV---------IETKSQEALEALSLVACTLAEGELRQLSL 150 G ++ VGD L V I+ + +AL LS+ TL EG+ L Sbjct: 115 TLGTGLAINVGDSALVNVVRRVTVADHLSDQIKVRVIDAL--LSMEEHTL-EGQALDLGW 171 Query: 151 SKN--LDVTEEDYLHVIKSKTAVLFSAA--LEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 ++N DVT + YL + SKTA +SAA L + +LI G ALK +G+ +G+AFQ Sbjct: 172 AQNERWDVTSDQYLFMALSKTA-YYSAAYPLVLGALIGGADQKTLDALKDFGLKVGLAFQ 230 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 L DD+L+ G+ E GK+ D GK TL V+ A + +K S ++ Sbjct: 231 LQDDLLNLVGDAKEQGKDFRSDITEGKRTLAVVYALEHLGSADKAELVSILSAHTTDTLR 290 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQR 320 L+ A +M A+ RA + ++AK L+ + + +L+ + DF + R Sbjct: 291 LQHAVELMESVNAIKFVRTRALALVEEAKLVLKNVILTEDARDTLLSMADFFVNR 345 >gi|313905343|ref|ZP_07838709.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6] gi|313469813|gb|EFR65149.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6] Length = 298 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 89/288 (30%), Positives = 137/288 (47%), Gaps = 35/288 (12%) Query: 19 ILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIE 72 I+ R D + +P + + Y + +GGKR+RP+L L + M GD V+ AIE Sbjct: 17 IVCRYLPDEKEVPGKLTEAMNYSMLAGGKRIRPVLMLESYRMC--GGDAAVVEPFMAAIE 74 Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF--------CMVI 122 IHT +L+HDD+ +DD RRGK +G VL GD LL+ A+ C Sbjct: 75 MIHTHSLVHDDLPAIDDDEFRRGKKTTHAAFGAALGVLAGDALLNYAYETAMTAFDCCQD 134 Query: 123 ETKSQEALEALSL---VACTLAEGELRQLSLSKN----LDVTEEDYLHVIKSKTAVLFSA 175 K AL L+ + L G+ + KN L+ DY++V +KTA L A Sbjct: 135 PAKVARALRVLAQKTGIGGMLG-GQSVDVENEKNGVFQLERKTIDYIYV--NKTAALLEA 191 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L + +++AG A++ G G+AFQ+ DDVLD + E+GK IG D +N K T Sbjct: 192 PLMIGAILAGADEKTVSAMQEIGHRAGLAFQIADDVLDVTSTLEELGKPIGSDEKNNKTT 251 Query: 236 LPVILAFQRGTKREKNFWKSTIN-----DGKISVENLKKAFIIMRENR 278 ++ + + + + + DG+ E LK+ + M + R Sbjct: 252 YVTLMGVEGAREEAERLTREAVELLASMDGEH--EFLKELLLFMADRR 297 >gi|257387323|ref|YP_003177096.1| polyprenyl synthetase [Halomicrobium mukohataei DSM 12286] gi|257169630|gb|ACV47389.1| Polyprenyl synthetase [Halomicrobium mukohataei DSM 12286] Length = 281 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 116/207 (56%), Gaps = 5/207 (2%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + D V+++ +GGKR+RP +T+ L + V A IE +H A+L+ DD++D+S Sbjct: 28 LADEVRHVALAGGKRVRPTVTVLVCEALGGEPADAVEFAVGIELVHNASLVIDDIIDESD 87 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 +RRG +A +G+ +++ D LL +AF + + + A++A++ L EGE +L Sbjct: 88 VRRGTPSAWAAFGHGPAIIASDGLLGEAFALF--SSDERAMQAVTESMVELGEGEATEL- 144 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 +S+ + TE Y+ + + KT LF AA E+ ++ A +A Y +G+AFQ+ D Sbjct: 145 VSQPTNETE--YIELARRKTGALFRAAAELGAIAADADAYTVEAFGQYAERVGVAFQMRD 202 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTL 236 DVLD + ++GK G+D +P+ Sbjct: 203 DVLDATADAEKLGKPAGQDAEMDRPSF 229 >gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland] gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland] Length = 290 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 121/226 (53%), Gaps = 13/226 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L L T + + + +A AIE IHT +L+HDD+ +D+ Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACT----- 139 LRRGK ++G ++L GD LL++A ++ E ++AL+A +A Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALKACYTIAKAAGVDG 148 Query: 140 LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G++ LS K++ + E Y+H K KT L A++ +++ + + L YG Sbjct: 149 MIGGQVVDILSEDKSISLDELYYMH--KKKTGALIKASILAGAILGSATYTDIELLGEYG 206 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NLG+AFQ+ DD+LD G+ +GK D N K T + ++ Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEK 252 >gi|170761674|ref|YP_001787211.1| geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree] gi|169408663|gb|ACA57074.1| putative geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree] Length = 290 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 119/228 (52%), Gaps = 17/228 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L L T + + + +A AIE IHT +L+HDD+ +D+ Sbjct: 29 IYEAMIYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC---TLAEGE 144 LRRGK ++G ++L GD LL++A ++ E + EAL AC T A G Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEEALK--ACYTITKAAGV 146 Query: 145 --------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + LS K++ + E Y+H K KT L A++ +++ + + L Sbjct: 147 DGMIGGQVVDILSEDKSISLDELYYMH--KKKTGALIKASILAGAILGSATYTDIELLGE 204 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 YG NLG+AFQ+ DD+LD G+ +GK D N K T + ++ Sbjct: 205 YGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEK 252 >gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901] gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901] Length = 295 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 86/266 (32%), Positives = 139/266 (52%), Gaps = 18/266 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 +I + Y + +GGKRLRP+L LA + + A +E +HT +L+HDD+ +D Sbjct: 31 VIHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDLPAMD 90 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEALSLVAC 138 + RRGK V+G ++L GD LL++AF + +T Q ++ L++ + Sbjct: 91 NDDFRRGKPTNHKVFGEAIAILAGDALLTKAFELTAKTLEQGIPAERVVRVIQELAVASG 150 Query: 139 T--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + L G++ LS S E L++ +KTA L +L ++AG +AL Sbjct: 151 SEGLIAGQVVDLS-SSEAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIKALDD 209 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR---EKNFW 253 YG +LG+AFQ+VDD+LD G+ ++GK +G D +N K T + + KR E N Sbjct: 210 YGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEETKKRAEEEINAA 269 Query: 254 KSTIND-GKISVENLKKA-FIIMREN 277 K+ + G+ S +K A FI+ RE+ Sbjct: 270 KNVLKPYGEKSSFFIKLAEFILKRES 295 >gi|167766573|ref|ZP_02438626.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1] gi|167711696|gb|EDS22275.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1] gi|291558609|emb|CBL37409.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium SSC/2] Length = 297 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 122/233 (52%), Gaps = 15/233 (6%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAA 97 +GGKRLRPML T M + D AIE IHT +L+HDD+ +D+ RRG+ Sbjct: 42 AGGKRLRPMLINETYQMFGGKEDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTC 101 Query: 98 RLVWGNQTSVLVGDFLL-------SQAFCMVIETKSQEALEALSLVACT-----LAEGEL 145 +V+G ++L GD LL ++AF + + K +EA+ ++A + G++ Sbjct: 102 HIVYGEDMAILAGDALLNYAYEVATKAFDLAEKDKIMNVVEAIKILASKPGIYGMIGGQV 161 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + L + ++ E L + K+KT+ L A + + +++AG ++ G +G+AF Sbjct: 162 ADVEL-EGTPLSMEQILFIHKNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAF 220 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 Q+ DD+LD G+ E+GK +G D +N K T + +R + ++ K I+ Sbjct: 221 QIQDDILDLTGDEEEIGKPVGSDEKNHKTTYVTLKGLERSQRDVEDISKKAID 273 >gi|49259559|pdb|1VG7|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F132aL128AI123AD62A MUTANT Length = 299 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 109/184 (59%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ + A+E +H A+LLHDDV+D + RRGK ++G++ +V GD +L AF Sbjct: 60 GEAAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + +A A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEAGNNKARRAALNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa] gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa] Length = 366 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 132/251 (52%), Gaps = 31/251 (12%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP+L LA ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 102 IHESMRYSLLAGGKRVRPVLCLAACELVGGSESMAMPAACAVEMIHTMSLIHDDLPCMDN 161 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAEGELR 146 LRRGK +V+G +VL GD LL+ AF + + T + L + V GEL Sbjct: 162 DDLRRGKSTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSPLRIVRAV------GELA 215 Query: 147 QLSLSKNL------DVTEE----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ ++ L D+ E +++H+ KTA L A+ + +++ G + Sbjct: 216 KVIGAEGLVAGQVVDICSEGLSEVGLEQLEFIHI--HKTAKLLEGAVVLGAILGGGTDEE 273 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ Y ++G+ FQ+VDD+LD E+GK G+D K T P ++ G ++ + Sbjct: 274 VEKLRRYARSIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLM----GIEKSR 329 Query: 251 NFWKSTINDGK 261 F + +N+ + Sbjct: 330 EFAEKLLNEAR 340 >gi|300214352|gb|ADJ78768.1| Geranyltranstransferase [Lactobacillus salivarius CECT 5713] Length = 305 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 79/256 (30%), Positives = 135/256 (52%), Gaps = 15/256 (5%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GD 62 E ++L +E L L + S+ +++ + ++Y + +GGKR+RP+L L +A L + Sbjct: 17 FEKISLPKLENEMDLYLNSLNSN-QILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISK 75 Query: 63 NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-- 118 + +A ++E +HT +L+HDD+ +D+ LRRGK +G +VL GD LL+ +F Sbjct: 76 SDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEW 135 Query: 119 ---CMVIETKSQEALEALSLVACT--LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVL 172 + K + + L+L A + G+ L SK ++ E +LH KT L Sbjct: 136 LSLTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYNLEELKHLHA--GKTGAL 193 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 A +++ ++ + L+ YG N G+AFQ+ DD+LD G+ +GKN+ +D Sbjct: 194 LRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIEN 253 Query: 233 KPTLPVILAFQRGTKR 248 K T P++L Q GTK Sbjct: 254 KNTYPILLGIQ-GTKE 268 >gi|302343358|ref|YP_003807887.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075] gi|301639971|gb|ADK85293.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075] Length = 297 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 20/225 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL-- 90 ++Y +F+GGKRLRP+L LA A + + ACA+E IHT +L+HDD+ Sbjct: 36 AMRYSLFAGGKRLRPILCLAGAEAVGGDPRRAMFCACALEMIHTYSLIHDDLPAMDDDDY 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET------KSQEALEALSLVACTLAEGE 144 RRG V+G +VL GD LL+QA ++ + ++ A +A ++V A G Sbjct: 96 RRGVPTNHKVFGQGMAVLAGDGLLTQAMVLLTDAAAVGDLPAERARQAANVV--MRAAGH 153 Query: 145 LRQ--------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L L+ + D+ DY+H KT L A+LE ++AG L Sbjct: 154 LGMVGGQAADLLAETMEPDLAMVDYIHA--RKTGALICASLEAGGILAGADRDRLSRLVR 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 YG +G+AFQ+ DD+LD G+ +GK G D GK T P +L Sbjct: 212 YGRRIGLAFQIADDLLDLEGDAETLGKATGADAAKGKMTYPAVLG 256 >gi|153937414|ref|YP_001387682.1| geranyltranstransferase [Clostridium botulinum A str. Hall] gi|152933328|gb|ABS38827.1| putative geranyltranstransferase [Clostridium botulinum A str. Hall] Length = 290 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 121/226 (53%), Gaps = 13/226 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L L T + + + +A AIE IHT +L+HDD+ +D+ Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACT----- 139 LRRGK ++G ++L GD LL++A ++ E ++ALEA +A Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALEACYAIAKAAGVDG 148 Query: 140 LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G++ LS K++ + E Y+H K KT L A++ +++ + + L YG Sbjct: 149 MIGGQVVDILSEDKSIPLDELYYMH--KKKTGALIKASILAGAILGSDTYTDIELLGEYG 206 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NLG+AFQ+ DD+LD G+ +GK D N K T + ++ Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEK 252 >gi|90408168|ref|ZP_01216336.1| geranyltranstransferase [Psychromonas sp. CNPT3] gi|90310698|gb|EAS38815.1| geranyltranstransferase [Psychromonas sp. CNPT3] Length = 296 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 124/231 (53%), Gaps = 15/231 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKR+RP L ML + +ACA+E +H +L+HDD+ +DD ALRRG+ Sbjct: 44 GGKRIRPFLVYVVGDMLGSQLSTLDPIACALECMHAYSLIHDDLPAMDDDALRRGQATCH 103 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVI----ETKSQEALEALSLVACT-----LAEGELRQLS 149 +V+G ++L GD L S AF ++ E L+ L+++A + G+ L+ Sbjct: 104 IVFGEAQAILAGDALQSLAFDILSQENKELSCSAQLKMLNVLAKASGDKGMCAGQALDLA 163 Query: 150 L-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI-AGVQNSVRQALKSYGMNLGIAFQL 207 +K +D+T + +H ++KT L AA+E+++L G+ + +Q L +Y +G+AFQ+ Sbjct: 164 AENKRVDLTMLESIH--RAKTGALIQAAVELATLTKVGLDSQHKQYLLTYARAIGLAFQV 221 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 DD+LD + +GK G D K T P +L ++ + + ++ I+ Sbjct: 222 QDDILDITSDSQTLGKPQGSDINANKSTYPALLGLEQAQHKMQLLYEEAID 272 >gi|302522954|ref|ZP_07275296.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78] gi|302431849|gb|EFL03665.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78] Length = 377 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 3/208 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + + V A A+E +H +LLHDD++D RR + V Sbjct: 81 GGKAVRPALALISAEVTGASAETGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 140 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S VT Sbjct: 141 HGPAQAILVGDALFALANEILLELGTPEAGRATRRLTRATRALIDGQAQDISYEHRDRVT 200 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 201 VEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLLGIWGD 260 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 261 PESTGKQTWSDLRQRKKSLPVVAALAAG 288 >gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum] Length = 363 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/233 (32%), Positives = 122/233 (52%), Gaps = 17/233 (7%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D I + ++Y + +GGKR+RPML LA ++ N + ACA+E IHT +L+HDD+ Sbjct: 95 DPPKIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQGNAMAAACAVEMIHTMSLIHDDLP 154 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---- 139 LRRGK V+G +VL GD LL+ AF + T + + LVA Sbjct: 155 CMDDDDLRRGKPTNHKVYGEDVAVLAGDALLAFAF-EYLATATTGVPPSRILVAVAELAK 213 Query: 140 ------LAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L G++ L+ + N +V E +++H+ KTA L A++ + +++ G + Sbjct: 214 SVGTEGLVAGQVADLACTGNPNVGLEMLEFIHI--HKTAALLEASVVIGAILGGGADEEV 271 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ + +G+ FQ+VDD+LD +E+GK G+D K T P +L ++ Sbjct: 272 DKLRRFAQCIGLLFQVVDDILDVTKSSSELGKTAGKDLAVDKTTYPKLLGLEK 324 >gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp. lyrata] gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp. lyrata] Length = 403 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 80/242 (33%), Positives = 128/242 (52%), Gaps = 21/242 (8%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y IF+GGKR+RP+L LA ++ + + AC++E IHT +L+ DD+ +D+ LR Sbjct: 143 MRYTIFAGGKRVRPILCLAACELVGGGERSAIPAACSVEMIHTMSLIKDDLPCMDNDDLR 202 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALE-----ALSLVACTLAEGE 144 RGK V+G ++L G LL+ AF + E S++ + A S+ L G+ Sbjct: 203 RGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRVVKELAKSIGTKGLVAGQ 262 Query: 145 LRQLSLSKNLDVTE---ED--YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 LS S+ LD + ED Y+HV KT L A+ + ++I G + ++S+ Sbjct: 263 AMDLS-SEGLDPNDFRLEDLEYIHV--HKTGALLEASAVIGAVIGGGSEEEIEKVRSFAR 319 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 +G+ FQ+VDD+LD E+GK G+D GK T P ++ G ++ K F K D Sbjct: 320 CIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPRVI----GLEKSKEFVKKLNRD 375 Query: 260 GK 261 + Sbjct: 376 AR 377 >gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032] gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032] Length = 296 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 117/227 (51%), Gaps = 29/227 (12%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSA--L 90 Y + +GGKRLRP+L LA +L G N + + CA+E IHT +L+HDD+ L Sbjct: 39 YSLKAGGKRLRPVLVLA---LLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---------------EALEALSL 135 RRGK V+G T+VL GD LL+++F ++ S ++ AL + Sbjct: 96 RRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSSSVSADKKLRIVDELVKSAGALGM 155 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 V + E Q K + + E +Y+H K+ + FS A +++AG + + L+ Sbjct: 156 VGGQFDDMEAEQ----KQVSLAELEYIHARKTGKLLTFSVA--AGAMLAGASDDDIEKLR 209 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + ++GIAFQ+ DD+LD G ++GK +G D N K T P +L Sbjct: 210 EFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSDTANEKSTYPSLLTL 256 >gi|329935839|ref|ZP_08285642.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045] gi|329304682|gb|EGG48557.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045] Length = 341 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 126/259 (48%), Gaps = 22/259 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++ +Y + + GK LRP+L +A+A V A A+E++H A+L+HDDV+D LR Sbjct: 41 EIARYALLAPGKLLRPLLLVASAEATGGSRSEVVPAALAVEYLHVASLIHDDVIDGDDLR 100 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE--------TKSQEALEALSLVACTLAEG 143 RG+ + ++G ++ GD LL + F V E T A+ L+ L G Sbjct: 101 RGQSSVHALYGVPDAIATGDALLFRVFSAVAECVALGVPDTAVLAAIRVLAEAGGDLCRG 160 Query: 144 ELRQLSLSK------NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 ++++ L+ LD Y + KT L AA +L++G +A+ + Sbjct: 161 QVQEAELAAAWPGAGGLDA----YREMASLKTGALLRAACRAGALLSGGSPEETEAVTVF 216 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +LG+AFQ+ DD+L Y + GK D N +PT PV+LA + +++ + + Sbjct: 217 AGHLGLAFQMYDDLLPYLADPAVTGKPGTSDAANLRPTFPVLLAHEAAGPEDRHRLEQAL 276 Query: 258 NDGKISVENLKKAFIIMRE 276 G + E + F ++RE Sbjct: 277 G-GDFTPE---RTFAVLRE 291 >gi|148379844|ref|YP_001254385.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502] gi|148289328|emb|CAL83424.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502] Length = 294 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 121/226 (53%), Gaps = 13/226 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L L T + + + +A AIE IHT +L+HDD+ +D+ Sbjct: 33 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 92 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACT----- 139 LRRGK ++G ++L GD LL++A ++ E ++ALEA +A Sbjct: 93 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALEACYAIAKAAGVDG 152 Query: 140 LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G++ LS K++ + E Y+H K KT L A++ +++ + + L YG Sbjct: 153 MIGGQVVDILSEDKSIPLDELYYMH--KKKTGALIKASILAGAILGSDTYTDIELLGEYG 210 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NLG+AFQ+ DD+LD G+ +GK D N K T + ++ Sbjct: 211 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEK 256 >gi|227890599|ref|ZP_04008404.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741] gi|227867537|gb|EEJ74958.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741] Length = 305 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 79/256 (30%), Positives = 135/256 (52%), Gaps = 15/256 (5%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GD 62 E ++L +E L L + S+ +++ + ++Y + +GGKR+RP+L L +A L + Sbjct: 17 FEKISLPKLENEMDLYLNSLNSN-QILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISK 75 Query: 63 NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-- 118 + +A ++E +HT +L+HDD+ +D+ LRRGK +G +VL GD LL+ +F Sbjct: 76 SDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEW 135 Query: 119 ---CMVIETKSQEALEALSLVACT--LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVL 172 + K + + L+L A + G+ L SK ++ E +LH KT L Sbjct: 136 LSLTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYNLEELKHLHA--GKTGAL 193 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 A +++ ++ + L+ YG N G+AFQ+ DD+LD G+ +GKN+ +D Sbjct: 194 LRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIEN 253 Query: 233 KPTLPVILAFQRGTKR 248 K T P++L Q GTK Sbjct: 254 KNTYPILLGVQ-GTKE 268 >gi|121593453|ref|YP_985349.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42] gi|120605533|gb|ABM41273.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42] Length = 311 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 127/243 (52%), Gaps = 10/243 (4%) Query: 11 DMEKVNFLILKRICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++ +V + + +C D + + ++Y + GGKRLRP+L LA + + + + + AC Sbjct: 29 ELARVEEALSRWVCHDAPAGLGEAMRYAVLDGGKRLRPLLVLAASHAVGGQPEAALRAAC 88 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKS 126 A+E IH +L+HDD+ +D+ +RRGK + +G ++L GD L + AF + E Sbjct: 89 AVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVRFGEARALLAGDALQALAFELLTPEDGV 148 Query: 127 QEALEA-----LSLVACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 A++A L+ A + + L S L ++E+ H+ KT L A++ + Sbjct: 149 PLAMQARLCRELAQAAGAAGMAGGQAIDLASVGLQLSEDQLRHMHSLKTGALLQASVVMG 208 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ + QAL YG +G+AFQ+VDDVLD + +GK G+D + KPT ++ Sbjct: 209 AVCGQPTGAALQALTDYGAAMGLAFQVVDDVLDVTQDSATLGKTAGKDAASDKPTYVSLM 268 Query: 241 AFQ 243 Q Sbjct: 269 GLQ 271 >gi|167464892|ref|ZP_02329981.1| Polyprenyl synthetase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 303 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/240 (30%), Positives = 119/240 (49%), Gaps = 20/240 (8%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L LA + + +ACAIE IHT +L+HDD+ +D+ RRG Sbjct: 44 YSLMAGGKRIRPVLVLAAVESFGLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRG 103 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----------LAE 142 K +G ++L GD LL+ AF V + Q A ++A + Sbjct: 104 KPTNHKKFGEAMAILAGDALLTHAFYSVTQAARQGGFSAEQVLAVVEEISVYAGARGMVG 163 Query: 143 GELRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G+ + + + EE +Y+H K+ ++ S L +++AG +AL +G + Sbjct: 164 GQAADMQGVQGITRLEELEYIHACKTSDLIICS--LRAGAILAGADEKQLRALTVFGSCI 221 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G+AFQ++DD+LD G+ ++GK + D + K T P + G K ++ K GK Sbjct: 222 GMAFQIMDDILDVAGDEAKLGKPVKSDEKQKKVTYPYFI----GLKASRDKVKGLTEQGK 277 >gi|322382773|ref|ZP_08056617.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153242|gb|EFX45688.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 298 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/240 (30%), Positives = 119/240 (49%), Gaps = 20/240 (8%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L LA + + +ACAIE IHT +L+HDD+ +D+ RRG Sbjct: 39 YSLMAGGKRIRPVLVLAAVESFGLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRG 98 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----------LAE 142 K +G ++L GD LL+ AF V + Q A ++A + Sbjct: 99 KPTNHKKFGEAMAILAGDALLTHAFYSVTQAARQGGFSAEQVLAVVEEISVYAGARGMVG 158 Query: 143 GELRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G+ + + + EE +Y+H K+ ++ S L +++AG +AL +G + Sbjct: 159 GQAADMQGVQGITRLEELEYIHACKTSDLIICS--LRAGAILAGADEKQLRALTVFGSCI 216 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G+AFQ++DD+LD G+ ++GK + D + K T P + G K ++ K GK Sbjct: 217 GMAFQIMDDILDVAGDEAKLGKPVKSDEKQKKVTYPYFI----GLKASRDKVKGLTEQGK 272 >gi|318058274|ref|ZP_07976997.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG] gi|318076936|ref|ZP_07984268.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF] Length = 386 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 3/208 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + + V A A+E +H +LLHDD++D RR + V Sbjct: 90 GGKAVRPALALISAEVTGASAETGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 149 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S VT Sbjct: 150 HGPAQAILVGDALFALANEILLELGTPEAGRATRRLTRATRALIDGQAQDISYEHRDRVT 209 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 210 VEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLLGIWGD 269 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 270 PESTGKQTWSDLRQRKKSLPVVAALAAG 297 >gi|197284007|ref|YP_002149879.1| geranyltranstransferase [Proteus mirabilis HI4320] gi|227358123|ref|ZP_03842464.1| geranyltranstransferase [Proteus mirabilis ATCC 29906] gi|194681494|emb|CAR40356.1| geranyltranstransferase [Proteus mirabilis HI4320] gi|227161459|gb|EEI46496.1| geranyltranstransferase [Proteus mirabilis ATCC 29906] Length = 307 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 20/242 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y GGKRLRP L A M N + A AIE IH +L+HDD+ +D+ L Sbjct: 43 AMRYGALLGGKRLRPFLVYAVGEMFNVPVANLDVPAAAIECIHAYSLIHDDLPAMDNDDL 102 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQL 148 RRGK + +G ++L GD L + AF ++ + + A ++++A L + Sbjct: 103 RRGKPTCHIEFGEANAILAGDALQTLAFEILAKNAMPDVAIADRVAMIAELATASGLAGM 162 Query: 149 SLSKNLDVTEED-----------YLHVIKSKTAVLFSAALEVSSLIAGVQ-NSVRQALKS 196 + LD+ ED +LH KT L AA+ + +L AG + + V AL Sbjct: 163 CGGQALDLDAEDKSIDLVALEKIHLH----KTGALIRAAVRLGALSAGQKGHDVLPALDK 218 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y ++G+AFQ+ DD+LD G E GK G D GK T P +L + K+ + + Sbjct: 219 YAHSIGLAFQVQDDILDVIGSTEETGKRQGSDQEAGKSTYPALLGLAQAQKKAQELYNEA 278 Query: 257 IN 258 ++ Sbjct: 279 LD 280 >gi|18310802|ref|NP_562736.1| geranyltranstransferase [Clostridium perfringens str. 13] gi|18145483|dbj|BAB81526.1| geranyltranstransferase [Clostridium perfringens str. 13] Length = 301 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 18/240 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDD 87 D + Y I GGKR+RP+L L + + Y+ D +L A AIE IHT +L+HDD+ +D+ Sbjct: 41 DSMAYSINVGGKRIRPILMLLSYYI--YKSDYKKILTPAMAIEMIHTYSLIHDDLPCMDN 98 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAE-- 142 LRRGK V+G +VL GD LL++A ++++ +E AL+A ++A Sbjct: 99 DDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGKSALKATKIIADAAGSDG 158 Query: 143 ---GELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G++ + + + + E DY+H+ KT L A++ +++A + L+ + Sbjct: 159 MIGGQIVDIINEDKEEISLKELDYMHL--KKTGELIKASIMSGAVLAEASEGDIKKLEGF 216 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G LG+AFQ+ DD+LD G ++GKN+ +D + K I + K+ N + I Sbjct: 217 GYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKKKCVNITEECI 276 >gi|90961512|ref|YP_535428.1| geranyltranstransferase [Lactobacillus salivarius UCC118] gi|90820706|gb|ABD99345.1| Geranyltranstransferase [Lactobacillus salivarius UCC118] Length = 297 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 79/256 (30%), Positives = 135/256 (52%), Gaps = 15/256 (5%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GD 62 E ++L +E L L + S+ +++ + ++Y + +GGKR+RP+L L +A L + Sbjct: 9 FEKISLPKLENEMDLYLNSLNSN-QILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISK 67 Query: 63 NHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-- 118 + +A ++E +HT +L+HDD+ +D+ LRRGK +G +VL GD LL+ +F Sbjct: 68 SDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEW 127 Query: 119 ---CMVIETKSQEALEALSLVACT--LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVL 172 + K + + L+L A + G+ L SK ++ E +LH KT L Sbjct: 128 LSLTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYNLEELKHLHA--GKTGAL 185 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 A +++ ++ + L+ YG N G+AFQ+ DD+LD G+ +GKN+ +D Sbjct: 186 LRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIEN 245 Query: 233 KPTLPVILAFQRGTKR 248 K T P++L Q GTK Sbjct: 246 KNTYPILLGVQ-GTKE 260 >gi|296313727|ref|ZP_06863668.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768] gi|296839651|gb|EFH23589.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768] Length = 298 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 117/232 (50%), Gaps = 14/232 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + E + AIE Sbjct: 20 LLLERFLPSEGEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++LVGD L +QAF ++ A Sbjct: 80 IHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G R ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSRGMAGGQAIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLGAMSC 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|294782565|ref|ZP_06747891.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA] gi|294481206|gb|EFG28981.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA] Length = 298 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 81/257 (31%), Positives = 128/257 (49%), Gaps = 27/257 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I ++Y + +GGKRLRP L T +L V A +E IH+ +L+HDD+ + Sbjct: 31 ETIAKGMEYALLNGGKRLRPFLLFTTLELLNQDIQKGVKSAIGVEMIHSYSLVHDDLPAL 90 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------LVACT 139 D+ RRGK+ V+G ++L+GD LL+ AF M+ S++ L LS +++ T Sbjct: 91 DNDDYRRGKLTTHKVFGEAEAILIGDALLTYAFYML----SEKNLNILSFEQITNIISKT 146 Query: 140 LAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A + + + +D+ E+ Y+H K KT L +E++ +IA V Sbjct: 147 SAYSGINGMIGGQMIDIESENKKINLETLKYIH--KHKTGKLIKLPIEIACIIADVSEDK 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R L+ Y +G+AFQ+ DD+LD G ++GK +G D K T P IL G + K Sbjct: 205 RLVLEEYAELIGLAFQVKDDILDIEGTFEDLGKPVGSDDDLHKATYPSIL----GMEESK 260 Query: 251 NFWKSTINDGKISVENL 267 T+ K + N+ Sbjct: 261 KILNETVERAKKIIHNM 277 >gi|310658722|ref|YP_003936443.1| farnesyltransferase [Clostridium sticklandii DSM 519] gi|308825500|emb|CBH21538.1| putative Farnesyltransferase [Clostridium sticklandii] Length = 311 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 121/225 (53%), Gaps = 4/225 (1%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATAL-MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 I + YL S GK LR L A ++ ++ + LA AIE H ATL+HDD++DDS Sbjct: 26 IRECTSYLSKSLGKNLRGNCILIVASDENQFVHEDAINLAVAIELFHLATLVHDDIIDDS 85 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--ACTLAEGELR 146 RRG + + + +T+V+ GD++L+ A + ++ ++ + SL A ++ GEL Sbjct: 86 PKRRGMDSLQSRFDKKTAVICGDYILAMAIELALKVDIKDEYKKYSLANYAKSVCLGELM 145 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 Q + N +++ + YL +I+ KTA LF AA +++ G S K+ G +G+ FQ Sbjct: 146 QDTNLFNYNLSLKRYLTIIRGKTAALFEAAFVSGAIVLGEPKSNVDLYKNIGRYIGMIFQ 205 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-TKREK 250 + DD +DY E K + D G TLP+I A ++ T REK Sbjct: 206 MSDDCMDYELTQAESNKPVLSDIAKGVITLPLIYAMKKNETIREK 250 >gi|224001362|ref|XP_002290353.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973775|gb|EED92105.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 318 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/288 (27%), Positives = 143/288 (49%), Gaps = 17/288 (5%) Query: 42 GKRLRPMLTLATALMLEYRGD----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GKR RP + A ++G L +E IH A+L+HDDV+D++ RRG A Sbjct: 37 GKRFRPTIVQLMA-KANHQGSEVWRKQAQLGQIVEMIHVASLIHDDVLDEADTRRGGEAV 95 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 ++ N+ +VL GD+LL++A ++ ++ ++ ++ +L GE+ QL S + Sbjct: 96 HKLYSNKVAVLAGDYLLARASVLLARLENTAVVQIMATALESLVAGEIMQLKASPEELLQ 155 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 + YL KTA L A ++L+ G ++V A + +G ++G+AFQ+ DD+LD+ Sbjct: 156 MQSYLKKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGFHMGLAFQIQDDILDFT 215 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE---KNFWKSTINDGKISVENLKKAFI 272 + +GK D G T P++ A + K +K D + ++E L K+ + Sbjct: 216 AAADILGKPALADMSLGLSTAPILYAAEEYPHLRPLVKRRFKEK-GDKQTALEALYKSEV 274 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 M + + L + + Q+A D+L LP S + +L+ + + R Sbjct: 275 AMDKAKRLAEF------HAQRAVDALLRLPQSEARDALLRLTYVVITR 316 >gi|15644283|ref|NP_229335.1| octoprenyl-diphosphate synthase, putative [Thermotoga maritima MSB8] gi|170288987|ref|YP_001739225.1| polyprenyl synthetase [Thermotoga sp. RQ2] gi|46015919|pdb|1V4E|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima gi|46015920|pdb|1V4E|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima gi|4982102|gb|AAD36602.1|AE001800_12 octoprenyl-diphosphate synthase, putative [Thermotoga maritima MSB8] gi|170176490|gb|ACB09542.1| Polyprenyl synthetase [Thermotoga sp. RQ2] Length = 299 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 109/184 (59%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E +H A+LLHDDV+D + RRGK ++G++ +V GD +L AF Sbjct: 60 GEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEIGNNKLRRAFLNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|52550277|gb|AAU84126.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon GZfos37B2] Length = 280 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 115/208 (55%), Gaps = 8/208 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +V+++ SGGK++RP++ + ++ + D V A AIE IH+A+L+HDD++D +RR Sbjct: 30 IVRHVFDSGGKKIRPIILILSSELFGGDADECVDAALAIELIHSASLIHDDILDVGLVRR 89 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G + +G ++L GDFL+S++ +I + ++ +++EGE ++ S Sbjct: 90 GVPSVYNQFGLAAAILCGDFLISKSI-ELISKYDRAVIQDFGRAGMSMSEGEALDVN-SN 147 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + +E DY I KTA LF+A+ + S I G YG +LG+A+Q++DD+L Sbjct: 148 ETNFSENDYFECISKKTASLFAASARMGSRIGGAPARSINRCTEYGTHLGMAYQIIDDIL 207 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + E+ K+ N TLP IL Sbjct: 208 ECK-ELQHEKKS-----ENTATTLPHIL 229 >gi|327179707|gb|AEA30255.1| putative isoprenyl diphosphate synthase [Streptomyces sp. Acta 2897] Length = 347 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 98/327 (29%), Positives = 155/327 (47%), Gaps = 12/327 (3%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPD-----VVKYLIFSGGKRLRPMLTLATALM 56 + D T + M+ V KR+ PD + +L SGGKR+RP+L L A Sbjct: 20 PLFRDRTAQRMQAVE----KRLVDVAADSPDPRVGELTGHLAVSGGKRMRPLLVLLGAEF 75 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 E D V A E +H ++L HDDV+D +ALR G +A WG + +V GD+LL++ Sbjct: 76 GEEWRDGVVDAAVIAELVHISSLYHDDVMDGAALRHGVPSANARWGERLAVAGGDWLLAR 135 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 A + + + + VA L EG+L +++ + + + V KTA L + A Sbjct: 136 AA-RLAAALGPDMVRFNADVAGDLVEGQLLEMTGPAEGEDPVQHFFRVTSGKTAALLAMA 194 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 L +L AG ++L YG LGIAFQ+ DD+LD E GK G+D G +L Sbjct: 195 LGAGALQAGAPAGQGRSLMEYGHQLGIAFQISDDLLDLVAPAEETGKEQGKDLAAGVLSL 254 Query: 237 PVILAFQRGTKREKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 PV+LA GT + + G + + ++A + R + A E A+ Sbjct: 255 PVLLAVS-GTGPADAELRDLLEAGPLDDLARRRRALELFRSSGAPAAAEQHLRERLALAR 313 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +L LP + +++L + D+ R++ Sbjct: 314 SALHDLPVCAGRRALDALCDYVGTRVS 340 >gi|71041841|pdb|1WKZ|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima K41a Mutant gi|71041842|pdb|1WKZ|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima K41a Mutant Length = 299 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 109/184 (59%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E +H A+LLHDDV+D + RRGK ++G++ +V GD +L AF Sbjct: 60 GEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEIGNNKLRRAFLNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|256545799|ref|ZP_05473155.1| heptaprenyl diphosphate synthase component II [Anaerococcus vaginalis ATCC 51170] gi|256398495|gb|EEU12116.1| heptaprenyl diphosphate synthase component II [Anaerococcus vaginalis ATCC 51170] Length = 333 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 1/209 (0%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDDSAL 90 ++++ + S GK +R L + +LM E + + ++ CA +E H A+L+HDD++DDS + Sbjct: 44 NIIENTLISSGKMIRTKLLIYISLMGENQISDKIISQCAAVEITHLASLIHDDIIDDSLI 103 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RR + + +G +V GD+++S+ F + + E + +S + GE+ Q + Sbjct: 104 RRSHRSIQSKYGKDVAVFAGDYMISKVFSYLAKKGLVEEISIISDTIRDMCNGEVGQNLI 163 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 LD++E++Y I KTA F + AG + +G NLG+ FQL DD Sbjct: 164 KYRLDISEKEYFENICGKTASFFKTVCYFGAKNAGFNQIDINKMVEFGKNLGLMFQLKDD 223 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +LD +E GK D + G T P++ Sbjct: 224 ILDLFSSKDETGKGEFVDVKEGVYTYPLL 252 >gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545] gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545] Length = 343 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%) Query: 28 EMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 EM P+ ++Y + +GGKR+RP L +A ++ + + ACA+E IHT +L+HDD Sbjct: 70 EMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMEVAMPTACALEMIHTMSLIHDD 129 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE--TKSQEALEALSLVA-- 137 + +D+ RRGK V+G + ++L GD LLS AF + KS A L ++ Sbjct: 130 LPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETPKSVPAERTLRVLVDV 189 Query: 138 --CTLAEGELRQ-----LSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 C +EG + +S + D VT E ++ KT L ++ +++AG + Sbjct: 190 GKCVGSEGLVGGQVVDIMSEGADADEVTLETLKYIHAHKTGALLEVSVTSGAILAGAKEE 249 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + L Y +G+AFQ+VDD+LD ++GK G+D GK T P ++ + K Sbjct: 250 DVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAGKDEAVGKATYPSLVGLEESKK 307 >gi|71041843|pdb|1WL0|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima R44a Mutant gi|71041844|pdb|1WL0|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima R44a Mutant Length = 299 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 109/184 (59%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E +H A+LLHDDV+D + RRGK ++G++ +V GD +L AF Sbjct: 60 GEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEIGNNKLRRAFLNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|315453024|ref|YP_004073294.1| Polyprenyl synthetase family [Helicobacter felis ATCC 49179] gi|315132076|emb|CBY82704.1| Polyprenyl synthetase family [Helicobacter felis ATCC 49179] Length = 295 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 20/209 (9%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLA--CAI-EFIHTATLLHDDVVDDSALRRGKVAAR 98 GK LR L LA H L CAI E I +A+LLHDDV+D++ RR + Sbjct: 31 GKMLRSKLILAIC-------PEHPQLIDFCAIIEMIQSASLLHDDVIDNAQTRRAHDSIN 83 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLD 155 ++GNQ ++++GD ++AF + + + E LVA + L+ GE++ + S Sbjct: 84 HIFGNQNAIMLGDVFYAKAFLELTKLDT----EIAQLVAHSVMELSRGEIKDVRASDTFH 139 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 Y+ +I+ K+A L A+ ++L+ G+ + QA +++G+N GIAFQ++DD+LD Sbjct: 140 TDITRYIDIIQDKSASLMVASCAGAALLGGLDS---QAYRTFGLNFGIAFQIMDDLLDIT 196 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +GK DF+ GK TLP IL Q Sbjct: 197 QPKEVLGKPAFSDFKEGKSTLPYILLHQH 225 >gi|70726395|ref|YP_253309.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435] gi|68447119|dbj|BAE04703.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435] Length = 293 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 135/253 (53%), Gaps = 21/253 (8%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + +GGKR+RP+L T +L A A+E IHT +L+HDD+ +D+ R Sbjct: 34 MQYSLNAGGKRIRPLLVFLTLDVLNQDYKKGKKTALALEMIHTYSLIHDDLPAMDNDDYR 93 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA---LEALSLVACTLAEGELRQL 148 RGK+ V+G ++L GD LL++AF ++ + + E+ ++ LS +A G L + Sbjct: 94 RGKLTNHKVYGEWKAILAGDALLTKAFEIIADDELLESDVKVKILSRLAHN--SGHLGMV 151 Query: 149 SLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + LD+ ED + K+KT L A+ ++ IA V S QAL+ + ++ Sbjct: 152 G-GQTLDMQSEDKPVDLDTLEQIHKAKTGALLQFAVLSAADIAKVDKSTSQALEDFSNHM 210 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G+ FQ+ DD+LD G+ +++GK +G D N K T +L + G + + NF K D Sbjct: 211 GLMFQIKDDLLDVYGDESKLGKKVGSDIENHKSTYVSLLG-KDGAEDKLNFHK----DAA 265 Query: 262 I-SVENLKKAFII 273 I S+E L + I Sbjct: 266 IKSIEQLSSHYDI 278 >gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3] gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3] Length = 296 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 126/262 (48%), Gaps = 29/262 (11%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------------- 128 + LRRGK V+G +VL GD LL+ AF +V+ + +E Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLEL 146 Query: 129 --ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A +V +A+ E K L + E +Y+H K KT L A+ ++++ Sbjct: 147 AKAAGPEGMVGGQVADMEAE----GKQLTIDELEYIH--KHKTGKLLEFAVLAGAILSNA 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + L + N+G+AFQ+ DD+LD G E+GK IG D N K T + R Sbjct: 201 TKEQEEKLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA- 259 Query: 247 KREKNFWKSTINDGKISVENLK 268 KN + TI K ++ +L+ Sbjct: 260 ---KNILEETIAKAKDAISSLQ 278 >gi|322411728|gb|EFY02636.1| geranylgeranyl pyrophosphate synthase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 332 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 83/249 (33%), Positives = 125/249 (50%), Gaps = 23/249 (9%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIF----SGGKRLRPMLTLATALMLEYRGD---N 63 D+E+ + + S++ +P +K I + GK LR L L L E +G+ Sbjct: 11 DIEEALVSVKHIMISEMSSLPPDIKTTILDYINASGKYLRAGLCLY--LEKEIQGEISQG 68 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + LA AIE H ATL+HDDV+D++ LRR V+ N+ ++ GD+LLS + + Sbjct: 69 KLYLAAAIETFHLATLIHDDVIDEAELRRNIKPLHQVYSNKIAIYAGDYLLS--YAGRLA 126 Query: 124 TKSQEALE-----------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 T+ + L +V LA GEL QL N +T + YL IK KTA L Sbjct: 127 TRGAQLLNIKDNWEDNGPLPYHIVERILA-GELAQLMNQHNSQMTMKAYLKQIKGKTAFL 185 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 F A ++ + + +A G+ LG+AFQL DD++DYR ++ GK +D +NG Sbjct: 186 FGLACQLGTWYPKIPQKTSKAAYQLGIFLGMAFQLSDDLIDYRLRADQSGKPRLQDVQNG 245 Query: 233 KPTLPVILA 241 T P+IL Sbjct: 246 IYTAPLILG 254 >gi|168214394|ref|ZP_02640019.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969] gi|168215448|ref|ZP_02641073.1| geranyltranstransferase [Clostridium perfringens NCTC 8239] gi|170714145|gb|EDT26327.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969] gi|182382163|gb|EDT79642.1| geranyltranstransferase [Clostridium perfringens NCTC 8239] Length = 290 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 18/240 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDD 87 D + Y I GGKR+RP+L L + + Y+ D +L A AIE IHT +L+HDD+ +D+ Sbjct: 30 DSMAYSINVGGKRIRPILMLLSYYI--YKSDYKKILTPAMAIEMIHTYSLIHDDLPCMDN 87 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAE-- 142 LRRGK V+G +VL GD LL++A ++++ +E AL+A ++A Sbjct: 88 DDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGKSALKATKIIADAAGSDG 147 Query: 143 ---GELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G++ + + + + E DY+H+ KT L A++ +++A + L+ + Sbjct: 148 MIGGQIVDIINEDKEEISLKELDYMHL--KKTGELIKASIMSGAVLAEASEGDIKKLEDF 205 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G LG+AFQ+ DD+LD G ++GKN+ +D + K I + K+ N + I Sbjct: 206 GYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKKKCVNITEECI 265 >gi|121998764|ref|YP_001003551.1| polyprenyl synthetase [Halorhodospira halophila SL1] gi|121590169|gb|ABM62749.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1] Length = 307 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 78/261 (29%), Positives = 134/261 (51%), Gaps = 21/261 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87 I + ++Y + GGKR+RP+L AT L++ G ACA+E IH +L+H +DD Sbjct: 42 IHEAMRYAVLGGGKRMRPILVYATGQALDHTGRALDAPACAVEMIHAYSLVHDDLPAMDD 101 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA---------LEALSLVAC 138 LRRG+ + T++LVGD L ++AF ++ + + + A + AL+ A Sbjct: 102 DDLRRGQPTCHRAYDEPTAILVGDALQARAFELLADGEREGAPAPAARAGMVHALARAAG 161 Query: 139 T--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QAL 194 + + G+ L ++ + LD E + +H+ KT L A++++ +L +G + AL Sbjct: 162 SGGMVGGQAIDLAAVGRQLDAAELEDMHI--HKTGALIRASVQLGALASGPTCAATLNAL 219 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 Y +G+AFQ+ DDVLD G+ + +GK G D KPT P IL G ++ + + Sbjct: 220 DRYAKCVGLAFQIHDDVLDVEGDADALGKEQGADAARDKPTYPSIL----GLRQSRELAE 275 Query: 255 STINDGKISVENLKKAFIIMR 275 D ++ +L ++R Sbjct: 276 RLAGDAIDALADLGPGADVLR 296 >gi|110802213|ref|YP_699103.1| geranyltranstransferase [Clostridium perfringens SM101] gi|110682714|gb|ABG86084.1| geranyltranstransferase [Clostridium perfringens SM101] Length = 290 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 128/241 (53%), Gaps = 18/241 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDD 87 D + Y + GGKR+RP+L L + + Y+ D +L A AIE IHT +L+HDD+ +D+ Sbjct: 30 DSMAYSVNVGGKRIRPILMLLSYYI--YKSDYKKILTPAIAIEMIHTYSLIHDDLPCMDN 87 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAE-- 142 LRRGK V+G +VL GD LL++A ++++ +E AL+A ++A Sbjct: 88 DDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGISALKATKIIADAAGSDG 147 Query: 143 ---GELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G++ + + + + E DY+H+ KT L A++ +++A + L+ + Sbjct: 148 MIGGQIVDIINEDKEEISLKELDYMHL--KKTGELIKASIMSGAILAEASERDIKKLEDF 205 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G LG+AFQ+ DD+LD G ++GKN+ +D + K I + K+ N + I Sbjct: 206 GYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKKKCVNITEECI 265 Query: 258 N 258 + Sbjct: 266 D 266 >gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379] gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379] Length = 297 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 21/227 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA- 89 ++Y +F+GGKR+RP+L LA + GD V + ACA+E IHT +L+HDD+ Sbjct: 35 AMRYSVFAGGKRVRPILMLAACQAV--GGDTEVAIPAACAMEMIHTYSLIHDDLPAMDDD 92 Query: 90 -LRRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKSQEALEALSLVA-CTLA 141 RRG V+G ++L GD LL++AF S+ L + +A C + Sbjct: 93 DFRRGNPTNHKVFGEAVAILAGDALLTEAFKLLSNPACAAGVPSEARLAVIHQIASCAGS 152 Query: 142 EGELR------QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G + + ++D+ Y+H KT L AA+ +L+ G A+ Sbjct: 153 HGMVGGQVVDMESEGKSDIDLPTVQYIHT--HKTGALIKAAVVAGALLGGADREKLAAIT 210 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 YG G+AFQ+ DD+LD G E+GK+ G D GK T P ++ Sbjct: 211 RYGSAAGLAFQIADDILDIEGTTEEIGKDAGSDQARGKATYPAVMGL 257 >gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032] gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032] Length = 298 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 81/230 (35%), Positives = 127/230 (55%), Gaps = 18/230 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA- 89 ++Y +F GGKR+RP+L LA A + E + +ACA+E IHT +L+HDD+ Sbjct: 36 MRYSLFVGGKRIRPILCLAGAEAVDSGEATRQRALSVACALECIHTYSLIHDDLPAMDDD 95 Query: 90 -LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL-VACTLAE--GEL 145 LRRGK V+G ++L GD LL+ AF ++ S + +A + + T+A G L Sbjct: 96 DLRRGKPTNHTVFGEAAAILAGDGLLTFAFDLLSSQASADINDAARIRIIQTIARAAGPL 155 Query: 146 RQLSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + ++LD+ E + L I +SKT L +A++ +++AG ALK+YG Sbjct: 156 GMVG-GQSLDMIYEGQQVGYEMLRTIHRSKTGALITASVLSGAMVAGASAEQETALKTYG 214 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 N+G+AFQ+VDD+LD ++GK G D ++ K T P + F + T R Sbjct: 215 DNIGLAFQIVDDLLDVEATTEQLGKPAGSDLKSDKVTYPSL--FGKETSR 262 >gi|110799631|ref|YP_696503.1| geranyltranstransferase [Clostridium perfringens ATCC 13124] gi|168210817|ref|ZP_02636442.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626] gi|182625644|ref|ZP_02953413.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721] gi|110674278|gb|ABG83265.1| geranyltranstransferase [Clostridium perfringens ATCC 13124] gi|170711106|gb|EDT23288.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626] gi|177909046|gb|EDT71521.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721] Length = 290 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 18/240 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDD 87 D + Y I GGKR+RP+L L + + Y+ D +L A AIE IHT +L+HDD+ +D+ Sbjct: 30 DSMAYSINVGGKRIRPILMLLSYYI--YKSDYKKILTPAMAIEMIHTYSLIHDDLPCMDN 87 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAE-- 142 LRRGK V+G +VL GD LL++A ++++ +E AL+A ++A Sbjct: 88 DDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGISALKATKIIADAAGSDG 147 Query: 143 ---GELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G++ + + + + E DY+H+ KT L A++ +++A + L+ + Sbjct: 148 MIGGQIVDIINEDKEEISLKELDYMHL--KKTGELIKASIMSGAVLAEASEGDIKKLEDF 205 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G LG+AFQ+ DD+LD G ++GKN+ +D + K I + K+ N + I Sbjct: 206 GYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKKKCVNITEECI 265 >gi|317047156|ref|YP_004114804.1| polyprenyl synthetase [Pantoea sp. At-9b] gi|316948773|gb|ADU68248.1| Polyprenyl synthetase [Pantoea sp. At-9b] Length = 299 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 21/264 (7%) Query: 13 EKVNFLILKRICSDVEM----IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 E+VN L L R+ + + + ++Y GGKRLRP L AT ML+ + A Sbjct: 12 ERVN-LALTRLLDPLPFQSSPLVNAMQYGALLGGKRLRPFLVYATGEMLKADPASLDAPA 70 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK- 125 A+E IH +L+HDD+ +DD ALRRG+ + +G T++L GD L + AF ++ + Sbjct: 71 AAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQPM 130 Query: 126 ---SQEA-------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 S EA L S VA L + +++D+ + + +H + KT L A Sbjct: 131 PGVSAEARITMISELAQASGVAGMCGGQALDLAAEGQSIDLAQLEQIH--RHKTGALIRA 188 Query: 176 ALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A+ + +L AG Q + L Y +G+AFQ+ DD+LD G+ +GK G D GK Sbjct: 189 AVRLGALAAGEQGRAALPVLDVYANAIGLAFQVQDDILDVVGDTAILGKTQGADQALGKS 248 Query: 235 TLPVILAFQRGTKREKNFWKSTIN 258 T P ++ ++ + ++ + Sbjct: 249 TYPALMGLDNARQKAWDLYQEALG 272 >gi|323127266|gb|ADX24563.1| geranylgeranyl pyrophosphate synthase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 332 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 83/249 (33%), Positives = 125/249 (50%), Gaps = 23/249 (9%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIF----SGGKRLRPMLTLATALMLEYRGD---N 63 D+E+ + + S++ +P +K I + GK LR L L L E +G+ Sbjct: 11 DIEEALVSVKHIMISEMSSLPPDIKTTILDYINASGKYLRAGLCLY--LEKEIQGEISQG 68 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + LA AIE H ATL+HDDV+D++ LRR V+ N+ ++ GD+LLS + + Sbjct: 69 KLYLAAAIETFHLATLIHDDVIDEAELRRNIKPLHQVYSNKIAIYAGDYLLS--YAGRLA 126 Query: 124 TKSQEALE-----------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 T+ + L +V LA GEL QL N +T + YL IK KTA L Sbjct: 127 TRGAQLLNIKDNWEDNGPLPYHVVERILA-GELAQLMNQHNSQMTMKAYLKQIKGKTAFL 185 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 F A ++ + + +A G+ LG+AFQL DD++DYR ++ GK +D +NG Sbjct: 186 FGLACQLGTWYPKIPQKTSKAAYQLGIFLGMAFQLSDDLIDYRLRADQSGKPRLQDVQNG 245 Query: 233 KPTLPVILA 241 T P+IL Sbjct: 246 IYTAPLILG 254 >gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18] gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29] gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28] gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28] gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29] gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18] Length = 296 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 126/262 (48%), Gaps = 29/262 (11%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------------- 128 + LRRGK V+G +VL GD LL+ AF +V+ + +E Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLEL 146 Query: 129 --ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A +V +A+ E K L + E +Y+H K KT L A+ ++++ Sbjct: 147 AKAAGPEGMVGGQVADMEAE----GKQLTIDELEYIH--KHKTGKLLEFAVLAGAILSNA 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + L + N+G+AFQ+ DD+LD G E+GK IG D N K T + R Sbjct: 201 TKEQEEKLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA- 259 Query: 247 KREKNFWKSTINDGKISVENLK 268 KN + TI K ++ +L+ Sbjct: 260 ---KNILEETIAKAKDAISSLQ 278 >gi|16803403|ref|NP_464888.1| hypothetical protein lmo1363 [Listeria monocytogenes EGD-e] gi|224499942|ref|ZP_03668291.1| hypothetical protein LmonF1_09784 [Listeria monocytogenes Finland 1988] gi|224501694|ref|ZP_03670001.1| hypothetical protein LmonFR_04127 [Listeria monocytogenes FSL R2-561] gi|254827624|ref|ZP_05232311.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165] gi|284801748|ref|YP_003413613.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578] gi|284994890|ref|YP_003416658.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923] gi|16410779|emb|CAC99441.1| lmo1363 [Listeria monocytogenes EGD-e] gi|258600002|gb|EEW13327.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165] gi|284057310|gb|ADB68251.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578] gi|284060357|gb|ADB71296.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923] Length = 293 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 129/258 (50%), Gaps = 18/258 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y I +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEGEL 145 K V+G+ T++L GD LL+ AF ++ E + ++L+ A + G+L Sbjct: 98 KWTNHKVFGDATAILAGDALLTLAFSILAEDDNLSFETRIALINQISFSSGAEGMVGGQL 157 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 L ++N VT E+ + KT L A+ ++ IA + L+ + N+GI F Sbjct: 158 ADLE-AENKQVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGF 216 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN----FWKSTINDGK 261 Q+ DD+LD G+ +MGK G D K T P +L G KR N KS ++ Sbjct: 217 QISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLD-GAKRALNEHVTIAKSALSGHD 275 Query: 262 ISVENLKK--AFIIMREN 277 E L K I +REN Sbjct: 276 FDDEILLKLADLIALREN 293 >gi|317484629|ref|ZP_07943532.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6] gi|316924103|gb|EFV45286.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6] Length = 302 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y + +GGKRLRP+L L+TA + + + A ++E IHT +L+HDD+ Sbjct: 40 EAMYYSLLAGGKRLRPVLCLSTAALFGLSAEAVMPFAASLEMIHTYSLIHDDLPAMDDDD 99 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT-----L 140 LRRG+ + + T++L GD LL+ AF + T + LEAL+ V+ + Sbjct: 100 LRRGRPSCHKAFDEATAILAGDALLTDAFGFMASTVKDLPAGRVLEALASVSSAAGSAGM 159 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ + + +V E + KT +F A L+AG S +L++YG Sbjct: 160 VGGQILDMDCTGKTNVPLETLQTLHALKTGAMFRVACVSGGLLAGASESDIASLRAYGEA 219 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 LG+ FQ+VDD+LD + +GK G D GK T P ++ R + + F + ++ Sbjct: 220 LGVTFQIVDDILDETADTATLGKPAGSDAEMGKTTYPSLMGLDRSRELAQEFAEKAVD 277 >gi|168186200|ref|ZP_02620835.1| geranyltranstransferase [Clostridium botulinum C str. Eklund] gi|169295787|gb|EDS77920.1| geranyltranstransferase [Clostridium botulinum C str. Eklund] Length = 289 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 13/220 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 +M+ D +KY + GGKR+RP+L L T + + + +ACAIE IHT +L+HDD+ + Sbjct: 26 KMVYDAMKYSVEVGGKRIRPILMLCTYSVYKDNYKEIMPMACAIEMIHTYSLIHDDLPAM 85 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVA-CTLA 141 D+ LRRGK V+G ++L GD LL++A ++ +AL+A +++ Sbjct: 86 DNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIMFNYSLNNDIKALKASKIISEAAGV 145 Query: 142 EGELRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 EG + +S K + + Y+H K+KT L +++ +++ N L Sbjct: 146 EGMIGGQVVDIISEGKKISIDNLRYMH--KNKTGKLIKSSIIAGAILGDAPNEDVNILDE 203 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +G LG+AFQ+ DD+LD G+ +GK + +D N K T Sbjct: 204 FGEKLGLAFQIKDDILDVIGDEKILGKEVHKDKENNKTTF 243 >gi|198419107|ref|XP_002123764.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase, subunit 1 [Ciona intestinalis] Length = 400 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 87/317 (27%), Positives = 152/317 (47%), Gaps = 16/317 (5%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALMLEYRG------DN 63 DM ++ I K + ++V+ + + Y GK RP +++L + L E+ G +N Sbjct: 91 DMSHLHSDIKKILHTNVKPLQTMCSYYFDGNGKHFRPKVVSLVSKLCNEHGGIERKVSEN 150 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 ++ E IH +L+HDDVVD S +RRGK + + G+ +V+VG+++++ A ++ Sbjct: 151 QRKISLIAEMIHVGSLIHDDVVDFSNVRRGKRSVNALCGDHNAVMVGNYVVANASKLLSS 210 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E +S + + GE Q N D + YL KTA L + + + + Sbjct: 211 IGNPEITIIISQIIDDIVRGEFMQ---QDNKDQFKH-YLKKTYKKTASLIANCCKAVACL 266 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + N V +A YG N+G+AFQLVDD+LD+ +GK D + G T PV+ A Sbjct: 267 SSNNNEVIEAAYQYGSNIGMAFQLVDDLLDFVASSKTLGKPSVADLKLGLATAPVLFACD 326 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + + G + + A + + AL +T A Y + A+ +L + Sbjct: 327 KHPDLHSLILRRFNETGDV-----EWALEAVYNSSALEETRLLAEQYCKDARLALSMFHE 381 Query: 304 SSWKKSLMEVVDFCLQR 320 S+ K +L+++ D L R Sbjct: 382 STNKTALLQLTDVVLNR 398 >gi|157866922|ref|XP_001682016.1| farnesyl synthetase [Leishmania major strain Friedlin] gi|68125467|emb|CAJ03328.1| putative solanesyl-diphosphate synthase [Leishmania major strain Friedlin] Length = 359 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 88/317 (27%), Positives = 152/317 (47%), Gaps = 35/317 (11%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVL-------------------- 66 E++ KY++ +GGK +RP L + A ML H+L Sbjct: 52 EVLDHAGKYVLAAGGKLMRPALVVLMAHAMLPLDVSAHLLEEPIGSLDEVTPGTILPFLR 111 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+LLHDDV+D++ RRG+ A V+ + +VL GD++L++A + + Sbjct: 112 LAEVTELIHTASLLHDDVIDNTDTRRGRPALHKVYDAKRAVLAGDYMLARASFYIATLQV 171 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + ++ L GEL Q+ ++ E+ KTA L + +L ++++AG Sbjct: 172 PRIVILMTTALEELTSGELMQMDGCFDIPRYEQKSF----CKTASLIANSLASTAVLAGP 227 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 N ++ Q +G +LGIAFQ++DD LD G+ +GK D + G T+PV+L +R Sbjct: 228 GNEALEQTAFDFGKHLGIAFQILDDCLDITGDEKMLGKPKLVDMKEGIATIPVLLVARRN 287 Query: 246 TKREKNFWK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 K + + + D + +E ++K A+ + +RA + + +SL L Sbjct: 288 AKVAEMVCRRFAEPGDAEFCLEAVEK-------EGAVAEAMHRADEHCRLGLESLHKLHH 340 Query: 304 SSWKKSLMEVVDFCLQR 320 S + +L + + R Sbjct: 341 SPARDALESALSMVMNR 357 >gi|168206126|ref|ZP_02632131.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987] gi|170662394|gb|EDT15077.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987] Length = 290 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 18/240 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDD 87 D + Y I GGKR+RP+L L + + Y+ D +L A AIE IHT +L+HDD+ +D+ Sbjct: 30 DSMAYSINVGGKRIRPILMLLSYYI--YKSDYKKILTPAMAIEMIHTYSLIHDDLPCMDN 87 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAE-- 142 LRRGK V+G +VL GD LL++A ++++ +E AL+A ++A Sbjct: 88 DDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVLVDYSLEEGKSALKATKIIADAAGSDG 147 Query: 143 ---GELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G++ + + + + E DY+H+ KT L A++ +++A + L+ + Sbjct: 148 MIGGQIVDIINEDKEEISLKELDYMHL--KKTGELIKASIMSGAVLAEASEGDIKKLEDF 205 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G LG+AFQ+ DD+LD G ++GKN+ +D + K I + K+ N + I Sbjct: 206 GYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKKKCVNITEECI 265 >gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus] Length = 316 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/228 (31%), Positives = 121/228 (53%), Gaps = 15/228 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP+L +A ++ + AC+IE IHT +L+HDD+ +D+ Sbjct: 52 IHEAMRYSLLAGGKRVRPVLCIAACEVVGGNESTAMAAACSIEMIHTMSLIHDDLPCMDN 111 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE---------ALSLVAC 138 LRRGK V+G +VL GD LL+ AF + + S + E A S+ Sbjct: 112 DDLRRGKPTNHKVFGENIAVLAGDALLAFAFEHIAVSTSGVSPERIIGAIGELAKSIGTE 171 Query: 139 TLAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ ++ D+ E +++H+ KTA L ++ V +++ G N + L+ Sbjct: 172 GLVAGQVVDINSEGLCDIGLEKLEFIHL--HKTAALLEGSVVVGAILGGGCNEEVEKLRM 229 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + +G+ FQ+VDDVLD E+GK G+D K T P +L ++ Sbjct: 230 FARYIGLMFQVVDDVLDVTKSSKELGKTAGKDLVADKVTYPKLLGIEK 277 >gi|333023207|ref|ZP_08451271.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071] gi|332743059|gb|EGJ73500.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071] Length = 377 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 106/208 (50%), Gaps = 3/208 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + V A A+E +H +LLHDD++D RR + V Sbjct: 81 GGKAVRPALALISAEVTGASAGTGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 140 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S VT Sbjct: 141 HGPAQAILVGDALFALANEILLELGTPEAGRATRRLTRATRALIDGQAQDISYEHRDRVT 200 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 201 VEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLLGIWGD 260 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 261 PESTGKQTWSDLRQRKKSLPVVAALAAG 288 >gi|290893528|ref|ZP_06556511.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria monocytogenes FSL J2-071] gi|290556873|gb|EFD90404.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria monocytogenes FSL J2-071] Length = 285 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 77/226 (34%), Positives = 118/226 (52%), Gaps = 12/226 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 30 YSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 89 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEGEL 145 K V+G+ T++L GD LL+ AF ++ E ++ ++L+ A + G+L Sbjct: 90 KYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEGMVGGQL 149 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + ++N VT E+ + KT L A+ ++ IA + L+ + N+GI F Sbjct: 150 ADME-AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGF 208 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 Q+ DD+LD G+ +MGK G D K T P +L G KR N Sbjct: 209 QISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLD-GAKRALN 253 >gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563] gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563] Length = 294 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/245 (30%), Positives = 130/245 (53%), Gaps = 14/245 (5%) Query: 25 SDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 SD+E+ +++KY + +GGKRLRP+LTL + E V+ A ++E IHT +L+H Sbjct: 25 SDIELENSFIEMLKYPLDAGGKRLRPVLTLLACELFEGDYKKAVIPAVSLELIHTYSLVH 84 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 DD+ +D+ LRRGK + +G ++LVGD LL+ AF ++ + +++ L + Sbjct: 85 DDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTHAFQLLSKADVKDSTLRKLLFELS 144 Query: 140 LAEGELRQLSLSKNLDVTEE------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQ 192 A G + + + + +D+ E D L V+ + KTA + A+ + ++ + N + Sbjct: 145 YAAG-INGMVMGQFIDLYYEEKEINFDMLKVLHAKKTAAMIRGAVRLGAISSENDNDIEN 203 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 K YG +G+AFQ+ DD+LD + +GK +G+D + GK T + K K Sbjct: 204 ITK-YGEAIGLAFQIQDDILDVISDNETLGKTVGKDEKEGKLTYVKQFGLEGAKKEAKKV 262 Query: 253 WKSTI 257 + I Sbjct: 263 TEKAI 267 >gi|169343610|ref|ZP_02864609.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495] gi|169298170|gb|EDS80260.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495] Length = 290 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 18/240 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDD 87 D + Y I GGKR+RP+L L + + Y+ D +L A AIE IHT +L+HDD+ +D+ Sbjct: 30 DSMAYSINVGGKRIRPILMLLSYYI--YKSDYKKILTPAMAIEMIHTYSLIHDDLPCMDN 87 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAE-- 142 LRRGK V+G +VL GD LL++A ++++ +E AL+A ++A Sbjct: 88 DDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVLVDYSLEEGTSALKATKIIADAAGSDG 147 Query: 143 ---GELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G++ + + + + E DY+H+ KT L A++ +++A + L+ + Sbjct: 148 MIGGQIVDIINEDKEEISLKELDYMHL--KKTGELIKASIMSGAVLAEASEGDIKKLEDF 205 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G LG+AFQ+ DD+LD G ++GKN+ +D + K I + K+ N + I Sbjct: 206 GYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKKKCVNITEECI 265 >gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum DSM 4136] Length = 295 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 83/263 (31%), Positives = 136/263 (51%), Gaps = 31/263 (11%) Query: 3 MLEDLTLKDMEKVNFL--ILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALM 56 M DL ++V F+ L R + E P +++ +F+GGKRLRP+L LA A Sbjct: 1 MSADLKSYLTQRVAFVDAALDRFVAAAETRPVTIHKAMRHSLFAGGKRLRPILCLAAAEA 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLL 114 +N + ACA+E +HT +L+HDD+ +RRG V+G ++L GD L Sbjct: 61 CGGSLENALYAACAVECLHTYSLIHDDLPCMDDDDMRRGVPTCHKVFGEAMALLAGDALQ 120 Query: 115 SQAFCMVIET-----KSQEAL--------EALSLVACTLA--EGELRQLSLSKNLDVTEE 159 + +F +V +T S A+ +L LV +A EGE ++L + E Sbjct: 121 ALSFELVAQTPVTHRHSPAAMVLELARTAGSLHLVGGQVADLEGEGKKLGI--------E 172 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 D ++ +SKTA L ++++++ + A Q QAL +GM G+AFQ++DD+LD Sbjct: 173 DLRYIHESKTAALLTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDVTQTTE 232 Query: 220 EMGKNIGEDFRNGKPTLPVILAF 242 ++GK+ G+D + K T P ++ Sbjct: 233 KLGKSAGKDVASEKSTYPALMGL 255 >gi|295835546|ref|ZP_06822479.1| polyprenyl synthetase [Streptomyces sp. SPB74] gi|197699439|gb|EDY46372.1| polyprenyl synthetase [Streptomyces sp. SPB74] Length = 385 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 3/208 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + + V A A+E +H +LLHDD++D RR + V Sbjct: 90 GGKAVRPALALISAEVTGAGAETGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 149 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S VT Sbjct: 150 HGPAQAILVGDALFALANEVLLELGTAEAGRATRRLTRATRALIDGQAQDISYEHRDRVT 209 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 210 VEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLLGIWGD 269 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 270 PESTGKQTWSDLRQRKKSLPVVAALAAG 297 >gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941] gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941] Length = 299 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 10/234 (4%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 +E + + ++Y + +GGKR+RP+L + +A + + + A AIE IHT +L+HDD+ Sbjct: 34 LERLQEAMRYSLLAGGKRVRPLLCMESASLFGAPPERVLPSAAAIELIHTFSLIHDDLPA 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D+ RRGK + +G ++L GD ++ ++ + + A + L++V Sbjct: 94 MDNDDFRRGKPTSHKKFGEAMAILAGDAFFGESLALITDHQEGSAEQVLAVVRELAHATG 153 Query: 145 LRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L L+ + LD+ K KT L A+ + +++AG +A+ Y Sbjct: 154 LAGLAGGQALDLEHTGRRAGPKELELTHHHKTGALIRASARIGAILAGAGEEGLEAISRY 213 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 LG+ FQ+VDDVLD G +GK G D GK T + + G +RE + Sbjct: 214 ATELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVSVFGLE-GARREAD 266 >gi|329937106|ref|ZP_08286735.1| polyprenyl synthatase [Streptomyces griseoaurantiacus M045] gi|329303713|gb|EGG47598.1| polyprenyl synthatase [Streptomyces griseoaurantiacus M045] Length = 357 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 14/292 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + V A A+E +H +LLHDD++D RR + V Sbjct: 66 GGKAVRPALALLSAQAAGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 125 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S V+ Sbjct: 126 HGPAQAILVGDALFALAGEVLLELGTVEAGRAARRLTSATRALIDGQAQDISYEHRDRVS 185 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G + V L++YG +LG+AFQ VDD+L G+ Sbjct: 186 VEECLEMEGNKTGALLACACSIGAVLGGADDEVADTLETYGHHLGLAFQAVDDLLGIWGD 245 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS-VENL-------KK 269 + GK D R K +LPV+ A G + + D K S EN + Sbjct: 246 PDATGKQAWSDLRQRKKSLPVVAALAAGGPASERLGRILAEDAKSSDFENFSEEEFAARA 305 Query: 270 AFIIMRENRALVDTEY-RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A I R E R + +A DS+R +PD + L+ + DF + R Sbjct: 306 ALIEEAGGREWTAGEARRQHEVAVRALDSVR-MPDQV-RAQLVALADFVVVR 355 >gi|316985189|gb|EFV64141.1| putative geranyltranstransferase [Neisseria meningitidis H44/76] gi|325135064|gb|EGC57692.1| geranyltranstransferase [Neisseria meningitidis M13399] gi|325141097|gb|EGC63600.1| geranyltranstransferase [Neisseria meningitidis CU385] gi|325199464|gb|ADY94919.1| geranyltranstransferase [Neisseria meningitidis H44/76] Length = 298 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 122/233 (52%), Gaps = 16/233 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + E + AIE Sbjct: 20 LLLERFLPSEGEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++L GD L +QAF ++ A Sbjct: 80 IHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT---------EEDYLHVIKSKTAVLFSAALEVSSL 182 L++++ G R ++ + +D+ + + +H +K+ A++ +A L ++ Sbjct: 140 QLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMHSLKTG-ALIRAAVLLGATA 198 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + ++ L +Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 199 CPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|217964491|ref|YP_002350169.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Listeria monocytogenes HCC23] gi|217333761|gb|ACK39555.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Listeria monocytogenes HCC23] gi|307570945|emb|CAR84124.1| geranyltranstransferase [Listeria monocytogenes L99] Length = 293 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 77/226 (34%), Positives = 118/226 (52%), Gaps = 12/226 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEGEL 145 K V+G+ T++L GD LL+ AF ++ E ++ ++L+ A + G+L Sbjct: 98 KYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEGMVGGQL 157 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + ++N VT E+ + KT L A+ ++ IA + L+ + N+GI F Sbjct: 158 ADME-AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGF 216 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 Q+ DD+LD G+ +MGK G D K T P +L G KR N Sbjct: 217 QISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLD-GAKRALN 261 >gi|222100092|ref|YP_002534660.1| Polyprenyl synthetase [Thermotoga neapolitana DSM 4359] gi|221572482|gb|ACM23294.1| Polyprenyl synthetase [Thermotoga neapolitana DSM 4359] Length = 267 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 107/184 (58%), Gaps = 5/184 (2%) Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H A+LLHDDV+D + RRGK ++G++ +V GD +L AF V E ++ Sbjct: 36 AALELVHLASLLHDDVIDGARFRRGKETINSLYGDRAAVAAGDLVLVSAFQTVEELENDT 95 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A V ++EGEL + L + +T+E+YL +++ K+ LF AL++ +L+ G Sbjct: 96 LRRAFLNVIRKMSEGELIE-QLKRYTPITKEEYLRIVEGKSGALFGLALQLPALLKGESG 154 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + L G+ +G +Q++DD++D+ E+ ++GK+ D +NG + PV+ A ++ + Sbjct: 155 ---EELYKLGVTIGTIYQMLDDIMDF-AEMEKIGKDGLLDLKNGVASFPVVTALEKFPEA 210 Query: 249 EKNF 252 + F Sbjct: 211 RQMF 214 >gi|118443490|ref|YP_878055.1| geranyltranstransferase [Clostridium novyi NT] gi|118133946|gb|ABK60990.1| geranyltranstransferase [Clostridium novyi NT] Length = 289 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 115/220 (52%), Gaps = 13/220 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 +++ D +KY + GGKR+RP L L T + + + + +ACAIE IHT +L+HDD+ + Sbjct: 26 KIVYDAMKYSVEVGGKRIRPTLMLCTYNVYKDNYKDIMPMACAIEMIHTYSLIHDDLPAM 85 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS----LVACTLA 141 D+ LRRGK V+G ++L GD LL++A ++ + AL + + Sbjct: 86 DNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIMFNYSLNNDIRALKASKIISEASGV 145 Query: 142 EGELRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 EG + +S K + + Y+H K+KT L + + +++ L+ Sbjct: 146 EGMIGGQVVDIISEGKKITIDNLKYMH--KNKTGKLIKSPIIAGAILGNAPKEDIDILEE 203 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +G LG+AFQ+ DD+LD G+V +GK I +D N K T Sbjct: 204 FGEKLGLAFQIKDDILDVIGDVKVLGKEIHKDKENNKTTF 243 >gi|326572218|gb|EGE22213.1| geranyltranstransferase [Moraxella catarrhalis BC8] Length = 328 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 23/224 (10%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGD--NH-------VLLAC----AIEFIHTATLLH 81 +Y + +GGKR+RP+L L+T LML GD NH + + C A+E IH+ +L+H Sbjct: 57 RYAMSNGGKRVRPLLALSTFLMLIQTGDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIH 116 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLVAC 138 DD+ +DD ALRRG+ +V+G ++L GD L S AF ++ E + A EA++ Sbjct: 117 DDLPCMDDDALRRGQPTCHIVYGEDIALLAGDALQSIAFEVLSEYYEEAPADEAVAYRLT 176 Query: 139 TLAEGELRQLSLSKNLDV-------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + R++ + LD+ T+++ + + KT L A++ + ++ AG Q + Sbjct: 177 QILSTRARRMVSGQMLDIKGENQVLTQDELEAIHRDKTGALIEASVMMGAVCAGAQTAAL 236 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 LK Y +G+AFQ+ DDVLD + +GK G D + K T Sbjct: 237 GHLKRYARAIGLAFQVQDDVLDITTDTITLGKPAGSDEKLEKST 280 >gi|325182786|emb|CCA17241.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 452 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 81/255 (31%), Positives = 132/255 (51%), Gaps = 22/255 (8%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFS-GGKRLRPM----------------- 48 L +++ V I + + +D ++ V KY GGK++RP Sbjct: 124 LVQTELQSVTESIKQILGTDHPVLSTVAKYFFEQDGGKKVRPTMVLLMSQAAEVNRLSNE 183 Query: 49 LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108 L L ++ E+ LA E IHTA+LLHDDV+D++ +RRG + V+G++ S+L Sbjct: 184 LPLPSSQSKEFTMAAQQRLAEITEMIHTASLLHDDVIDEAEMRRGIQSVNRVFGDKLSIL 243 Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE--EDYLHVIK 166 GDFLL+++ + ++ + +E +S + L +GE+ Q+ +N E YL Sbjct: 244 AGDFLLARSSVCLARLRNVKVVELMSTIIEHLVKGEVMQMRNVQNRSNISLLEYYLRKNY 303 Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KTA L + + + + + + V + +YG +LG+AFQL+DDVLDY G E GK + Sbjct: 304 YKTASLMANSCKAALTLGQHTDYVCEMGFAYGRHLGLAFQLIDDVLDYEGL--ESGKPLL 361 Query: 227 EDFRNGKPTLPVILA 241 D R G T P++LA Sbjct: 362 ADLRCGVITAPLLLA 376 >gi|89099255|ref|ZP_01172133.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. NRRL B-14911] gi|89086101|gb|EAR65224.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. NRRL B-14911] Length = 298 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 134/265 (50%), Gaps = 22/265 (8%) Query: 3 MLEDLTLKDMEKVNFLILKRICSD-------VEMIPDVVKYLIFSGGKRLRPMLTLATAL 55 M+ ++ L +V+ +L+R + E++ + Y + +GGKR+RP+L AT Sbjct: 1 MVPNVQLDSFSEVHIKMLERELEESVSRLAAPEVLKKAMHYSLQAGGKRIRPLLVFATLK 60 Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFL 113 + A A+E IHT +L+HDD+ LRRGK + V+G ++L GD L Sbjct: 61 AFGEDTKKGLQAAAAVEMIHTYSLIHDDLPSMDDDDLRRGKPTSHKVFGEANAILAGDAL 120 Query: 114 LSQAFCMVIETKSQEALEAL------SLVACTLAEGELRQLSLS-----KNLDVTEEDYL 162 L+ +F ++ + ++A + L + AEG + + K+LD+ E +Y+ Sbjct: 121 LTYSFQLLAQMAPEDADAEVKLALINELARASGAEGMVGGQTADIEGEDKDLDLEELEYI 180 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 HV K+ + FS A +L++ + S ++L + +LG+AFQ+ DD+LD G +G Sbjct: 181 HVHKTGKLLAFSVA--AGALLSRAEESRLKSLNEFAHHLGLAFQIRDDILDLEGNEEVLG 238 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTK 247 K +G D N K T P IL + K Sbjct: 239 KPVGSDETNNKSTYPSILTMEGANK 263 >gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto] gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto] Length = 290 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 121/226 (53%), Gaps = 13/226 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L L T + + + +A AIE IHT +L+HDD+ +D+ Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACT----- 139 LRRGK ++G ++L GD LL++A ++ E ++A++A +A Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKAVKACYTIAKAAGVDG 148 Query: 140 LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G++ LS K++ + E Y+H K KT L A++ +++ + + L YG Sbjct: 149 MIGGQVVDILSEDKSIPLDELYYMH--KKKTGALIKASILAGAILGSATYTDIELLGEYG 206 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NLG+AFQ+ DD+LD G+ +GK D N K T + ++ Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEK 252 >gi|15224199|ref|NP_179454.1| GGPS4 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4); farnesyltranstransferase [Arabidopsis thaliana] gi|75266042|sp|Q9SLG2|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 4; AltName: Full=Dimethylallyltranstransferase 4; AltName: Full=Farnesyl diphosphate synthase 4; AltName: Full=Farnesyltranstransferase 4; AltName: Full=Geranyltranstransferase 4; Flags: Precursor gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP synthetase/farnesyltranstransferase [Arabidopsis thaliana] gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana] Length = 372 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 80/246 (32%), Positives = 130/246 (52%), Gaps = 21/246 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I ++Y I +GGKR+RP+L LA ++ + ACA+E IHT +L+ DD+ +D+ Sbjct: 108 IHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDN 167 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLVACT-----L 140 LRRGK V+G ++L G LL+ AF + E S++ + A+ +A + L Sbjct: 168 DDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRAVKELAKSIGTKGL 227 Query: 141 AEGELRQLS---LSKNLDVTEED--YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G+ + LS L +N DV ED Y+HV KT L A+ + ++I G + ++ Sbjct: 228 VAGQAKDLSSEGLEQN-DVGLEDLEYIHV--HKTGSLLEASAVIGAVIGGGTEKEIEKVR 284 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++ +G+ FQ+VDD+LD E+GK G+D GK T P ++ G ++ K F + Sbjct: 285 NFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVI----GVEKSKEFVEK 340 Query: 256 TINDGK 261 D + Sbjct: 341 LKRDAR 346 >gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana] Length = 373 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 80/246 (32%), Positives = 130/246 (52%), Gaps = 21/246 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I ++Y I +GGKR+RP+L LA ++ + ACA+E IHT +L+ DD+ +D+ Sbjct: 108 IHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDN 167 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLVACT-----L 140 LRRGK V+G ++L G LL+ AF + E S++ + A+ +A + L Sbjct: 168 DDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRAVKELAKSIGTKGL 227 Query: 141 AEGELRQLS---LSKNLDVTEED--YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G+ + LS L +N DV ED Y+HV KT L A+ + ++I G + ++ Sbjct: 228 VAGQAKDLSSEGLEQN-DVGLEDLEYIHV--HKTGSLLEASAVIGAVIGGGTEKEIEKVR 284 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++ +G+ FQ+VDD+LD E+GK G+D GK T P ++ G ++ K F + Sbjct: 285 NFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVI----GVEKSKEFVEK 340 Query: 256 TINDGK 261 D + Sbjct: 341 LKRDAR 346 >gi|317012084|gb|ADU82692.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Helicobacter pylori Lithuania75] Length = 307 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 122/215 (56%), Gaps = 14/215 (6%) Query: 42 GKRLRPMLTLATALMLEYRGD----NHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L+ + D + V CAI E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLDEKTDAISLDKVFNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K EA+ + LS L+ GE+ + + ++ + Sbjct: 92 INALFGNFNAVMLGDVFYSKAFFEL--SKMGEAIAQILSNAVLRLSRGEIEDVFVGESFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ N + +G+N G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFIEASLKSMAILL---NKDAKIYADFGLNFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +GK DF+ GK TLP +L +++ +R++ Sbjct: 207 QDAKTLGKPNFSDFKEGKTTLPYLLLYEKLNQRDQ 241 >gi|160897684|ref|YP_001563266.1| polyprenyl synthetase [Delftia acidovorans SPH-1] gi|160363268|gb|ABX34881.1| Polyprenyl synthetase [Delftia acidovorans SPH-1] Length = 316 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 44/233 (18%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKRLRP+L A A ++ V CA+E IH +L+HDD+ +D+ Sbjct: 51 EAMRYAVLDGGKRLRPLLVWAAAEAVDGLQPAAVRAGCAVELIHAYSLVHDDMPCMDNDV 110 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEA------------ 132 LRRGK + +G +++L GD L + AF +++ Q +AL+A Sbjct: 111 LRRGKPTVHVQFGEASALLAGDALQALAFELLVPEPDQAGSMPDALQARLCRLLGRAAGA 170 Query: 133 ----------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 L+ V L+E +LR++ H +K+ A+L ++ L ++ Sbjct: 171 QGMAGGQAIDLASVGLQLSEAQLREM--------------HRLKTG-ALLHASVLMGAAC 215 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 GV QAL YG LG+AFQ+VDD+LD + +GK G+D N KPT Sbjct: 216 KEGVDAQAWQALSDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPT 268 >gi|46015922|pdb|1V4I|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F132a Mutant Length = 299 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 109/184 (59%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E +H A+LLHDDV+D + RRGK ++G++ +V GD +L AF Sbjct: 60 GEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEIGNNKLRRAALNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916] gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916] Length = 290 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 121/226 (53%), Gaps = 13/226 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L L T + + + +A AIE IHT +L+HDD+ +D+ Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACT----- 139 LRRGK ++G ++L GD LL++A ++ E ++A++A +A Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKAVKACYTIAKAAGVDG 148 Query: 140 LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G++ LS K++ + E Y+H K KT L A++ +++ + + L YG Sbjct: 149 MIGGQVVDILSEDKSIPLDELYYMH--KKKTGALIKASILAGAILGSATYTDIELLGEYG 206 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NLG+AFQ+ DD+LD G+ +GK D N K T + ++ Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKETKSDEDNHKTTFVKVYGIEK 252 >gi|240113852|ref|ZP_04728342.1| geranyltranstransferase [Neisseria gonorrhoeae MS11] gi|240126561|ref|ZP_04739447.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679] gi|254494609|ref|ZP_05107780.1| geranyltranstransferase [Neisseria gonorrhoeae 1291] gi|268599920|ref|ZP_06134087.1| geranyltranstransferase [Neisseria gonorrhoeae MS11] gi|268685141|ref|ZP_06152003.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679] gi|226513649|gb|EEH62994.1| geranyltranstransferase [Neisseria gonorrhoeae 1291] gi|268584051|gb|EEZ48727.1| geranyltranstransferase [Neisseria gonorrhoeae MS11] gi|268625425|gb|EEZ57825.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679] Length = 298 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 125/233 (53%), Gaps = 16/233 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + D AIE Sbjct: 20 LLLERFLPSGNEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---IETKSQE 128 IH +L+HDD+ +D+ +LRRGK + +G T++L GD L +QAF ++ E + Sbjct: 80 IHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTGDALQTQAFDVLSRPTELPAAR 139 Query: 129 ALEALSLVACT-----LAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 L LS++A T +A G+ L+ + K + + + +H +K+ A++ +A L ++ Sbjct: 140 QLAMLSVLAKTGGSAGMAGGQAIDLANVGKQMVQADLERMHSLKTG-ALIRAAVLLGATA 198 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + ++ L +Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 199 CPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|312869913|ref|ZP_07730052.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3] gi|311094498|gb|EFQ52803.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3] Length = 291 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 126/247 (51%), Gaps = 26/247 (10%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLH 81 D + ++Y + +GGKRLRP LTLAT +E G ++ V A A+E +HT +L+H Sbjct: 25 DQSTLAASMQYSVLAGGKRLRPTLTLAT---VEIFGGELTEDVVRAATALELLHTYSLIH 81 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET------KSQEALE-A 132 DD+ +D+ LRRG +G + L GD LL+ AF V + KSQ ALE A Sbjct: 82 DDLPAMDNDDLRRGAPTNHRKFGAGMATLAGDGLLTLAFQWVTDNQLPATMKSQLALELA 141 Query: 133 LSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + + G+ R + + L + + YLH + KT L A+ +I +V+ Sbjct: 142 KAAGPAGMVAGQARDIEGTGRRLTLDQLRYLH--RQKTGALLRYAVLAGGIITVQPAAVQ 199 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA-------FQR 244 + L +G + G+AFQ+ DD++D G MGK +G+D + K T P +L Q+ Sbjct: 200 RLLAQFGSSYGLAFQIYDDLMDVVGTTTAMGKRVGKDAADHKNTYPGLLGVTGAEEQLQQ 259 Query: 245 GTKREKN 251 +R KN Sbjct: 260 ALERAKN 266 >gi|288931665|ref|YP_003435725.1| polyprenyl synthetase [Ferroglobus placidus DSM 10642] gi|288893913|gb|ADC65450.1| Polyprenyl synthetase [Ferroglobus placidus DSM 10642] Length = 301 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 92/302 (30%), Positives = 147/302 (48%), Gaps = 46/302 (15%) Query: 20 LKRICSDVEMIPDV---VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFI 74 LK + +IP + +K+LI +GGKR RP++ L +A + GD +L A A+E I Sbjct: 15 LKELLDREVIIPKIKKALKHLIEAGGKRTRPIIVLLSAKLA--GGDEKEILDMALAVELI 72 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTA+L HDDV+D RR K + + + ++LVGD+L+S++ + + + + + Sbjct: 73 HTASLAHDDVIDRGVKRRNKETLNVKYDDSLAILVGDWLISKSVQLTAKY-GYDIVRDFA 131 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 ++EGE+ + +K EEDY I+ KTA LF+ + + ++ Q+ + L Sbjct: 132 KTGMLMSEGEVLDVYSTKE-KFDEEDYFKCIEYKTAALFAYSAK-NAYQYFSQDEGVEKL 189 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 YG+NLGIA+QLVDD+L+Y + I TLP+I Sbjct: 190 FQYGLNLGIAYQLVDDLLEYLSLYGDKSSKIES------RTLPMIY-------------- 229 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 + K VE K + + +VD Y QK+K +L D K L+ +V Sbjct: 230 ----EEKFGVEKAVKKVMDL-----IVD-------YSQKSKKALEFFEDGVVKSKLLRLV 273 Query: 315 DF 316 DF Sbjct: 274 DF 275 >gi|313669268|ref|YP_004049552.1| geranyltranstransferase [Neisseria lactamica ST-640] gi|313006730|emb|CBN88200.1| geranyltranstransferase [Neisseria lactamica 020-06] Length = 298 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 75/233 (32%), Positives = 119/233 (51%), Gaps = 16/233 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y + GGKRLRPML LA + + E D AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAVLDGGKRLRPMLVLAASELGESVADAVGQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++L GD L +QAF ++ A Sbjct: 80 IHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSLIA 184 L++++ G ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSMGMAGGQTIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLGAMSC 199 Query: 185 G--VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +NS+ L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLPENSL-AVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC 7421] gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC 7421] Length = 295 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 12/239 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKRLRP+L L + M D + ACA+E +HT +L+HDD+ Sbjct: 35 EAMRYSLLAGGKRLRPILCLTSCRMSGGSADLAMPTACALEMVHTMSLIHDDLPAMDDDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVA-----CTL 140 RRGK+ V+G ++L GD LL+ AF ++ E + + +E L + L Sbjct: 95 YRRGKLTNHKVYGEDMAILAGDALLAYAFQLIAEKTVGAQPERVVEVLGRLGKAASGAGL 154 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ L S+ +T E ++ KT L ++ +++AG V + L Y Sbjct: 155 VGGQVVDLE-SEGRTITLETLEYIHTHKTGALLEVSVISGAILAGADGGVVERLTRYSRC 213 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 +G+AFQ+ DD+LD E+GK G+D R+ K T P +L + R + + + + Sbjct: 214 IGLAFQIRDDLLDITATQAELGKTAGKDLRDRKATYPSLLGYDGARDRAEQLREQAVAE 272 >gi|312199711|ref|YP_004019772.1| polyprenyl synthetase [Frankia sp. EuI1c] gi|311231047|gb|ADP83902.1| Polyprenyl synthetase [Frankia sp. EuI1c] Length = 338 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 3/233 (1%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGK +RP L L +A + + A A+E +H +LLHDD++D RR + A Sbjct: 52 GGGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDLMDGDTERRHRPTAWT 111 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDV 156 V+G ++L GD LL A +++E + + +A ++ L G+ L DV Sbjct: 112 VFGADGAILAGDALLGLATQVLLEVEGEPGRKAAVILGAGVQDLVRGQAEDLLFESRSDV 171 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T + LH+ KT L + A + +++AG V L +G LG AFQL+DD+L G Sbjct: 172 TVAETLHMEDGKTGALLACAASLGAVLAGAPKEVVDGLAEFGSRLGTAFQLIDDLLGIWG 231 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 + GK + D ++ K ++PV++A + G + +++G E+L++ Sbjct: 232 DPAVTGKPVLSDLQSRKKSVPVVVALEAGGPDAEELRAFLVSEGDRPTEDLER 284 >gi|13431546|sp|Q42698|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; Flags: Precursor gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus] Length = 357 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 27/234 (11%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--V 85 I + ++Y + +GGKR+RPML +A + + G V + ACA+E IHT +L+HDD+ + Sbjct: 93 IHESMRYSLLAGGKRVRPMLCIAACEL--FGGTESVAMPSACAVEMIHTMSLMHDDLPCM 150 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-----SLVACTL 140 D+ LRRGK V+G +VL GD LL+ AF + + E + L C Sbjct: 151 DNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGVSSERIVRVVGELAKCIG 210 Query: 141 AEGELRQLSLSKNLDVTEE----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +EG L + +DV E +++H+ KTA L ++ + +++ G + Sbjct: 211 SEG----LVAGQVVDVCSEGIADVGLEHLEFIHI--HKTAALLEGSVVLGAIVGGANDEQ 264 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ + +G+ FQ+VDD+LD E+GK G+D K T P +L + Sbjct: 265 ISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIDK 318 >gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91] gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91] Length = 297 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 81/264 (30%), Positives = 137/264 (51%), Gaps = 22/264 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + +GGKR+RP+L+ A + + + A+E IH +L+HDD+ +D+ Sbjct: 36 EAMRYAVLNGGKRVRPLLSFAAGELSGADKTQVIAASAAVELIHAYSLVHDDLPCMDNDI 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET------KSQ-EALEALSLVACT--L 140 LRRGK + +G T++LVGD L S AF ++ E+ ++Q E + L+ A + + Sbjct: 96 LRRGKPTCHIRYGEPTALLVGDSLQSLAFQLLAESALTEDPRTQLEMIRHLAFAAGSRGM 155 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSYG 198 A G+ L S+ K L + E +++H+ KT L AA+ + + N + + L + Sbjct: 156 AGGQAIDLDSVGKTLSLPELEFMHI--HKTGALIRAAVILGARCGSRLNEDQFKQLDHFA 213 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK--ST 256 +G+AFQ+VDD+LD +GK G+D N KPT IL ++ + + S Sbjct: 214 KCIGLAFQVVDDILDAEASTAALGKTAGKDAENNKPTYVSILGIKQARELAHELQREASG 273 Query: 257 INDGKISVENLK----KAFIIMRE 276 + D K E L+ FI+ RE Sbjct: 274 VLD-KFGPEALRLQQITDFIVQRE 296 >gi|308048592|ref|YP_003912158.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799] gi|307630782|gb|ADN75084.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799] Length = 294 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 79/257 (30%), Positives = 125/257 (48%), Gaps = 20/257 (7%) Query: 20 LKRICSDVEMI-P---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L+RI D+ + P D ++Y GGKR+RP L AT ML + D+ LA A+E IH Sbjct: 16 LERIFDDLPVTDPRLLDAMRYGTLLGGKRVRPFLVYATGTMLGAKEDDLDSLAAAVECIH 75 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA- 132 +L+HDD+ +DD LRRG+ + + T++L GD L A+ ++ E ALE Sbjct: 76 AYSLIHDDLPAMDDDHLRRGQPTVHIAFDEATAILAGDALQGLAYELLAEAPLPAALEGN 135 Query: 133 -----LSLVACTLAEG-----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 SL + +G + S K +++ LH + KT L +A+E+ S Sbjct: 136 RIAMLRSLARASGYQGMCGGQAIDLASTGKRIELDALQQLH--RLKTGALIRSAVEMGSY 193 Query: 183 -IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +A + R AL Y +G+AFQ+ DD+LD + ++GK G D K T P +L Sbjct: 194 GVADLATEHRDALLRYAEAIGLAFQVQDDILDITADTEQLGKPQGSDQAADKSTFPALLG 253 Query: 242 FQRGTKREKNFWKSTIN 258 ++ ++ + Sbjct: 254 LDGARDAAQSLYQDALT 270 >gi|254824578|ref|ZP_05229579.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194] gi|293593816|gb|EFG01577.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194] Length = 293 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 18/258 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEGEL 145 K V+G+ T++L GD LL+ AF ++ E ++ ++L+ A + G+L Sbjct: 98 KYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEGMVGGQL 157 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + ++N VT E+ + KT L A+ ++ IA + L+ + N+GI F Sbjct: 158 ADME-AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGF 216 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN----FWKSTINDGK 261 Q+ DD+LD G+ +MGK G D K T P +L G KR N KS ++ Sbjct: 217 QISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLD-GAKRALNEHVAIAKSALSGHD 275 Query: 262 ISVENLKK--AFIIMREN 277 E L K I +REN Sbjct: 276 FDDEILLKLADLIALREN 293 >gi|46015925|pdb|1V4K|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima S77f Mutant Length = 299 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 108/184 (58%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E +H A LLHDDV+D + RRGK ++G++ +V GD +L AF Sbjct: 60 GEDAISSLAALELVHLAFLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEIGNNKLRRAFLNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|302674533|ref|XP_003026951.1| hypothetical protein SCHCODRAFT_61590 [Schizophyllum commune H4-8] gi|300100636|gb|EFI92048.1| hypothetical protein SCHCODRAFT_61590 [Schizophyllum commune H4-8] Length = 443 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 47 PMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106 P+LT A ++ + LA +E IH A+LLHDDV+D S LRRG +A +GN + Sbjct: 177 PLLTAAPTIL-----PTQMRLAHVLEMIHAASLLHDDVIDASPLRRGVASAPEAFGNNLA 231 Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166 VL G+F+L +A + E + ++ + L EGE+ QL S+N YL Sbjct: 232 VLGGNFVLGRASAALARLGDLEVVGLIASIISNLVEGEILQLK-SQNPSDAWNLYLQKTY 290 Query: 167 SKTAVLFSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 KTA L + + + G + R+ +YG NLGIAFQL DD+LDY +GK Sbjct: 291 MKTASLMAKGARAAVALGGCKEGEVWREVAYAYGRNLGIAFQLQDDILDYEVSDATLGKP 350 Query: 225 IGEDFRNGKPTLPVILAFQ 243 G D + G T P + A + Sbjct: 351 GGADLQLGLATGPALYAME 369 >gi|115376388|ref|ZP_01463625.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1] gi|310822665|ref|YP_003955023.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1] gi|115366595|gb|EAU65593.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1] gi|309395737|gb|ADO73196.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1] Length = 297 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 18/248 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDV--VD 86 + ++Y + +GGKRLRP+L L A + + ACA+E+IHT +L+HDD+ +D Sbjct: 39 EAMRYSLLAGGKRLRPVLCLTFADTTSRQSTAAAPVEDAACAVEYIHTYSLVHDDLPSMD 98 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 + LRRG+ V+G ++L GD LL++AF +V E + L L Sbjct: 99 NDDLRRGRPTNHKVYGEGMALLAGDALLTEAFALV--GSGPEPVRGL-LCGELARAAGAA 155 Query: 147 QLSLSKNLDVTEE-----DYL-HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + + LDV E+ DYL + + KT L AA + L AG +YG Sbjct: 156 GMVGGQVLDVAEDRPAHLDYLVRLHRMKTGALLRAACRMGVLGAGGDAETLARATTYGDA 215 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+AFQ+ DD+LD ++GK +G D G+ T P ++ G + + + + Sbjct: 216 IGLAFQIADDILDVTATAEDLGKPVGADSAAGRFTFPAVV----GLEASRKLASDKVAEA 271 Query: 261 KISVENLK 268 +VE L+ Sbjct: 272 VAAVEPLE 279 >gi|254852589|ref|ZP_05241937.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503] gi|300765397|ref|ZP_07075379.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017] gi|258605902|gb|EEW18510.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503] gi|300513834|gb|EFK40899.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017] Length = 293 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 18/258 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEGEL 145 K V+G+ T++L GD LL+ AF ++ E ++ ++L+ A + G+L Sbjct: 98 KYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEGMVGGQL 157 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + ++N VT E+ + KT L A+ ++ IA + L+ + N+GI F Sbjct: 158 ADME-AENKQVTIEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGF 216 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN----FWKSTINDGK 261 Q+ DD+LD G+ +MGK G D K T P +L G KR N KS ++ Sbjct: 217 QISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLD-GAKRALNEHVAIAKSALSGHD 275 Query: 262 ISVENLKK--AFIIMREN 277 E L K I +REN Sbjct: 276 FDDEILLKLADLIALREN 293 >gi|254829880|ref|ZP_05234535.1| hypothetical protein Lmon1_00925 [Listeria monocytogenes 10403S] Length = 293 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 18/258 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y I +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEGEL 145 K V+G+ T++L GD LL+ AF ++ E + ++L+ A + G+L Sbjct: 98 KWTNHKVFGDATAILAGDALLTLAFSILAEDDNLSFETRIALINQISFSSGAEGMVGGQL 157 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + ++N VT E+ + KT L A+ ++ IA + L+ + N+GI F Sbjct: 158 ADME-AENKHVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGF 216 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN----FWKSTINDGK 261 Q+ DD+LD G+ +MGK G D K T P +L G KR N KS ++ Sbjct: 217 QISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLD-GAKRALNEHVTIAKSALSGHD 275 Query: 262 ISVENLKK--AFIIMREN 277 E L K I +REN Sbjct: 276 FDDEILLKLADLIALREN 293 >gi|222871917|gb|EEF09048.1| predicted protein [Populus trichocarpa] Length = 254 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 75/242 (30%), Positives = 119/242 (49%), Gaps = 44/242 (18%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKRLRP+L A A ++ V CA+E IH +L+HDD+ +D+ Sbjct: 16 EAMRYAVLDGGKRLRPLLVWAAAEAVDGLQPAAVRAGCAVELIHAYSLVHDDMPCMDNDV 75 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEA------------ 132 LRRGK + +G +++L GD L + AF +++ Q +AL+A Sbjct: 76 LRRGKPTVHVQFGEASALLAGDALQALAFELLVPEPDQTGSMPDALQARLCRLLGRAAGA 135 Query: 133 ----------LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 L+ V L+E +LR++ H +K+ A+L ++ L ++ Sbjct: 136 QGMAGGQAIDLASVGLQLSEAQLREM--------------HRLKTG-ALLHASVLMGAAC 180 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 GV QAL YG LG+AFQ+VDD+LD + +GK G+D N KPT +L Sbjct: 181 KEGVDAQAWQALSDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPTYVSLLGL 240 Query: 243 QR 244 + Sbjct: 241 DQ 242 >gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6] gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6] Length = 298 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 16/234 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKRLRP+L LA A ++ + + ACA+E IH +L+HDD+ +D+ L Sbjct: 36 AMRYGVLDGGKRLRPLLVLAAAGCVDGHPEAALRAACAVELIHAYSLIHDDMPCMDNDVL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-ALSLVACTL--------- 140 RRGK + +G ++L GD + + AF ++ + + + AL C+L Sbjct: 96 RRGKPTVHVQYGEARAMLAGDAMQALAFEVLTPEDTDDGVPPALQARLCSLLARASGVLG 155 Query: 141 -AEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 A G+ L+ + K +D +H KT L A++ + + + QAL YG Sbjct: 156 MAGGQAIDLAHVGKQMDEAALQDMH--GRKTGALLQASVLMGAACGRTTPAQWQALADYG 213 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +G+AFQ+VDD+LD +GK G+D KPT +L + +R ++ Sbjct: 214 WAIGLAFQVVDDILDVTQCAETLGKTAGKDADQNKPTYVSLLGLEGARERAQSL 267 >gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus] Length = 368 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 74/233 (31%), Positives = 127/233 (54%), Gaps = 25/233 (10%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--V 85 I + ++Y + +GGKR+RP L LA ++ GD + + ACA+E IHT +L+HDD+ + Sbjct: 104 IHESMRYSLLAGGKRVRPALCLAACELV--GGDESMAMPAACAVEMIHTMSLIHDDLPCM 161 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIET-------------KSQEALE 131 D+ LRRGK +V+G +VL GD LL+ AF + + T + +A+ Sbjct: 162 DNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVSTLNVSPVRIVRGVGELAKAIG 221 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 A LVA + + LS +D+ + +++H+ KTA L A+ + +++ G + Sbjct: 222 AEGLVAGQVVDICSEGLS---EVDLEKLEFIHI--HKTAKLLEGAVVLGAIMGGGTDEEV 276 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + L+ Y ++G+ FQ+VDD+LD E+GK G+D K T P ++ ++ Sbjct: 277 EKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLMGIEK 329 >gi|46907589|ref|YP_013978.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str. F2365] gi|47093750|ref|ZP_00231500.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858] gi|226223964|ref|YP_002758071.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes Clip81459] gi|254932322|ref|ZP_05265681.1| geranyltranstransferase [Listeria monocytogenes HPB2262] gi|46880857|gb|AAT04155.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str. F2365] gi|47017871|gb|EAL08654.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858] gi|225876426|emb|CAS05135.1| Putative Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583878|gb|EFF95910.1| geranyltranstransferase [Listeria monocytogenes HPB2262] gi|328467501|gb|EGF38570.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 1816] gi|328475077|gb|EGF45865.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 220] gi|332311804|gb|EGJ24899.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A] Length = 293 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 18/258 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEGEL 145 K V+G+ T++L GD LL+ AF ++ E ++ ++L+ A + G+L Sbjct: 98 KYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEGMVGGQL 157 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + ++N VT E+ + KT L A+ ++ IA + L+ + N+GI F Sbjct: 158 ADME-AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGF 216 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN----FWKSTINDGK 261 Q+ DD+LD G+ +MGK G D K T P +L G KR N KS ++ Sbjct: 217 QISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLD-GAKRALNEHVAIAKSALSGHD 275 Query: 262 ISVENLKK--AFIIMREN 277 E L K I +REN Sbjct: 276 FDDEILLKLADLIALREN 293 >gi|330814378|ref|YP_004358617.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487473|gb|AEA81878.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 293 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 123/224 (54%), Gaps = 13/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y +F+GGK++R LT+A + + + + + +A AIE +H+ +L+HDD+ +D+ Sbjct: 34 EAMGYGLFAGGKKIRSYLTVAAFDLFDIKEETAIAVAAAIECVHSYSLIHDDLPSMDNDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACT----L 140 RRGK + +G T++L G+ LL+ AF ++ K ++ +L +C+ + Sbjct: 94 FRRGKESTHKKFGESTAILAGNSLLTIAFEILTSNHLNLDKEVKSDLVFALASCSGHLGI 153 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 A G+ LS E+ +H+ KT L E ++++A +N+ R+ LK G++ Sbjct: 154 AGGQFLDLSFEGKAQ-DEKTIIHMQNKKTGELMGFCTEAAAIVA-KKNNDREELKKIGLD 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+ FQ+ DD+LD G+ N++GK +D + GK TL + Sbjct: 212 IGLLFQIADDLLDVYGDQNKLGKPSKQDDKKGKATLIATFGLDK 255 >gi|300857173|ref|YP_003782157.1| putative polyprenyl synthetase [Clostridium ljungdahlii DSM 13528] gi|300437288|gb|ADK17055.1| predicted polyprenyl synthetase [Clostridium ljungdahlii DSM 13528] Length = 274 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 10/203 (4%) Query: 18 LILKRICS--DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-----GDNHVLLACA 70 L LK I S D + D+ Y GKRLRP LT +A + N + L+ + Sbjct: 19 LELKNIASKLDSTVTQDIFTYFFSIPGKRLRPTLTFLSAGAISSELTSSAKHNLIQLSIS 78 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E IH+A+L+HDD++D LRRG+ +GN+ +VL GD L S+AF + +T +E Sbjct: 79 LELIHSASLIHDDIIDGDLLRRGQKTLNKTFGNKIAVLAGDALYSRAFTIFSDTLPREFA 138 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + + V +++ E+ + N E Y +I KTA SA + IA Sbjct: 139 QVMGRVTESMSVAEILN---ANNPSPDRETYFKIILGKTASFMSACCRLGGSIAYAPYEE 195 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 L YG NLG+A+Q++DD +D Sbjct: 196 SNMLSKYGENLGMAYQILDDYID 218 >gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ipp gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ipp gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (I) gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (I) gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (Ii) gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (Ii) gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands Length = 295 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 119/238 (50%), Gaps = 23/238 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RPML +A ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 31 IHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDN 90 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA-----E 142 LRRGK + +G +VL GD LLS AF V E + V LA E Sbjct: 91 DDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSE 150 Query: 143 GELRQLSLSKNLDVTEE-------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G L + +DV E D+L I KTA L ++ + +++ G + L Sbjct: 151 G----LVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKL 206 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 + + +G+ FQ+VDD+LD E+GK G+D K T P ++ G ++ K F Sbjct: 207 RKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLI----GVEKSKEF 260 >gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis] Length = 381 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 131/248 (52%), Gaps = 20/248 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 + I + ++Y + +GGKR+RP+L +A ++ + + ACAIE IHT +L+HDD+ + Sbjct: 114 QKIYESMRYSLLAGGKRVRPVLCIAACELVGGTEELAIPTACAIEMIHTMSLMHDDLPCI 173 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVA----CT 139 D+ LRRGK ++G T+V G+ L S AF V +K+ A L +V+ T Sbjct: 174 DNDDLRRGKPTNHKIFGEDTAVTAGNALHSYAFEHIAVSTSKTVGADRILRMVSELGRAT 233 Query: 140 LAEGELRQLSLS------KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 +EG + + ++D+ +++H+ KTA+L ++ ++I G V + Sbjct: 234 GSEGVMGGQMVDIASEGDPSIDLQTLEWIHI--HKTAMLLECSVVCGAIIGGASEIVIER 291 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 + Y +G+ FQ+VDD+LD +E+GK G+D + K T P ++ G ++ K F Sbjct: 292 ARRYARCVGLLFQVVDDILDVTKSSDELGKTAGKDLISDKATYPKLM----GLEKAKEFS 347 Query: 254 KSTINDGK 261 +N K Sbjct: 348 DELLNRAK 355 >gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var. palaestina] Length = 364 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 123/234 (52%), Gaps = 19/234 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHD 82 + E I + ++Y + +GGKR+RP+L +A + E G N + ACA+E IHT +L+HD Sbjct: 96 EPEKIHEAMRYSLLAGGKRVRPILCIAAS---ELVGGNESMAMPSACAVEMIHTMSLIHD 152 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSLV 136 D+ +D+ LRRGK V+G +VL GD LL+ AF V + + A+ + Sbjct: 153 DLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAFEYVANATVGVSPSRVVRAIGEL 212 Query: 137 AC-----TLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSV 190 A L G++ + LS + D+L I KTA L A++ + +++ G + Sbjct: 213 AKDIGSEGLVAGQVVDI-LSAGMSNIGLDHLEFIHLHKTAALLEASVVIGAILGGGTDEQ 271 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + L+ + +G+ FQ+VDD+LD E+GK G+D K T P +L ++ Sbjct: 272 VERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDLVADKATYPKLLGLEK 325 >gi|15611295|ref|NP_222946.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori J99] gi|4154736|gb|AAD05797.1| putative OCTAPRENYL-DIPHOSPHATE SYNTHASE [Helicobacter pylori J99] Length = 307 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 144/265 (54%), Gaps = 18/265 (6%) Query: 42 GKRLRPMLTLATALMLEYRGD----NHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L+ + D + L CAI E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLDEKTDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K E++ +ALS L+ GE+ + + + + Sbjct: 92 INALFGNFNAVMLGDVFYSKAFFEL--SKMGESIAQALSNAVLRLSRGEIEDVFVGECFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ N + +G++ G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFIEASLKSMAILL---NKDAKMYADFGLHFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAFIIM 274 + N +GK DF+ GK TLP +L +++ + E+ S D +E K+ F Sbjct: 207 QDANTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQGLLISYFKQDSHEIIEWTKEKF--- 263 Query: 275 RENRALVDTEYRAYSYGQKAKDSLR 299 +++ + +T A Y +KA ++++ Sbjct: 264 KQHGIIEETLKIAQVYSKKALEAIK 288 >gi|309800468|ref|ZP_07694624.1| geranyltranstransferase [Streptococcus infantis SK1302] gi|308115909|gb|EFO53429.1| geranyltranstransferase [Streptococcus infantis SK1302] Length = 291 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 123/245 (50%), Gaps = 17/245 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRR 92 Y + +GGKR+RP L L L+ H +A A+E IHT +L+HDD+ +D+ RR Sbjct: 33 YSVHAGGKRIRPYLLLEVLDSLQVPITQEHAQVAAALEMIHTGSLIHDDLPAMDNDDFRR 92 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS--- 149 G++ V+G ++L GD L + ++ + + + +LA G + ++ Sbjct: 93 GRLTNHKVYGEALAILAGDALFLDPYALIAQADLPSQTKVDLIANLSLASGSMGMVAGQV 152 Query: 150 -----LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 K+L++ E +H +KT L S + + +IAG+ + ++ LK+ G +G+A Sbjct: 153 LDMEGEGKHLNLEELQTIHA--NKTGKLLSFPFQAAGIIAGLDENHQKQLKTVGELIGLA 210 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 FQ+ DDVLD E+GK +D + K T P +L G ++ K F T++ + Sbjct: 211 FQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALL----GLEQAKAFCNQTLDQANAKL 266 Query: 265 ENLKK 269 E + + Sbjct: 267 EEISQ 271 >gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var. palaestina] Length = 310 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 121/232 (52%), Gaps = 19/232 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDV 84 E I + ++Y + +GGKR+RP+L +A E G N + ACA+E IHT +L+HDD+ Sbjct: 44 EKIHEAMRYSLLAGGKRVRPILCIAAC---ELVGGNESMAMPSACAVEMIHTMSLMHDDL 100 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSLVAC 138 +D+ LRRGK V+G +VL GD LL+ AF V + + A+ +A Sbjct: 101 PCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAFEYVANATVGVSPSRVIRAIGELAK 160 Query: 139 -----TLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQ 192 L G++ + LS + D+L I KTA L A++ + +++ G + + Sbjct: 161 DIGSEGLVAGQVVDI-LSAGMSNIGLDHLEFIHLHKTAALLEASVVIGAILGGGTDEQVE 219 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ + +G+ FQ+VDD+LD E+GK G+D K T P +L ++ Sbjct: 220 RLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDLVADKATYPKLLGLEK 271 >gi|332288106|ref|YP_004418958.1| putative geranyltranstransferase [Gallibacterium anatis UMN179] gi|330431002|gb|AEC16061.1| putative geranyltranstransferase [Gallibacterium anatis UMN179] Length = 295 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 82/265 (30%), Positives = 134/265 (50%), Gaps = 19/265 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + D ++Y + GGKR+RP L AT ML +A AIE IH +L+HDD+ +D+ Sbjct: 33 LADAMRYSLLLGGKRIRPFLVYATGRMLGVDLAKLDHIAGAIECIHCYSLIHDDLPAMDN 92 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---SQEALEALSLVACTLAEG- 143 LRR + + T++L GD L S AF ++ ++ Q+ L+ L + AEG Sbjct: 93 DTLRRNNPTCHIAFDEATAILAGDALQSYAFELLAKSPIADQQKILQFQLLANASGAEGM 152 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV-QN-SVRQALKSY 197 L +S +K + + E + +H K+KT L +AA+ + + QN ++Q L S+ Sbjct: 153 CLGQSLDLISENKQIGLAELERIH--KNKTGALITAAVLLGFYCSSYYQNEQIKQKLISF 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW---K 254 +G+AFQ+ DD+LD E+GKN G D + K T P +L + ++ + K Sbjct: 211 SAAIGLAFQVQDDILDITSSNEELGKNAGSDLKAHKSTYPQLLGLAQAKEKASALYYSAK 270 Query: 255 STINDGKISVENLK--KAFIIMREN 277 S +++ + L FI+ R N Sbjct: 271 SILSELEFDTSALAALAEFIVKRRN 295 >gi|302557115|ref|ZP_07309457.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000] gi|302474733|gb|EFL37826.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000] Length = 378 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 3/226 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L + +A + + V A A+E +H +LLHDD++D RR + V Sbjct: 87 GGKAVRPALAVLSAEVTGAAPETGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 146 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E S EA A L+ + L +G+ + +S V+ Sbjct: 147 HGPAQAILVGDALFALANEVLLELGSVEAGRATRRLTAASRALIDGQAQDISYEHRDRVS 206 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G + AL+ YG +LG+AFQ VDD+L G+ Sbjct: 207 VEECLEMEGNKTGALLACASSIGAVLGGADDRTADALERYGYHLGLAFQAVDDLLGIWGD 266 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 GK D R K +LPV+ A G + + D K S Sbjct: 267 PEATGKQTWSDLRQRKKSLPVVAALAAGGPASERLGEILAADAKSS 312 >gi|326574817|gb|EGE24747.1| geranyltranstransferase [Moraxella catarrhalis 101P30B1] Length = 326 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 126/247 (51%), Gaps = 24/247 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--NH-------VLLAC----AIEFI 74 E + +Y + +GGK +RP+L L+T LML GD NH + + C A+E I Sbjct: 50 EPLNAACRYAMSNGGKHVRPLLALSTFLMLIQTGDHKNHKNNLTKKLQMVCRAMMAVELI 109 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALE 131 H+ +L+HDD+ +DD ALRRG+ +V+G ++L GD L S AF ++ E + A + Sbjct: 110 HSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDIALLAGDALQSIAFEVLFECYDKNSADD 169 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIA 184 A++ L R++ + LD+ E D L I + KT L AA+ + ++ A Sbjct: 170 AIAYKLAKLLSCRARRMVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICA 229 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 VQ LK Y +G+AFQ+ DDVLD + +GK G D + K T +L + Sbjct: 230 DVQTDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGKPAGSDEKLEKSTYVKLLGV-K 288 Query: 245 GTKREKN 251 G + N Sbjct: 289 GAQEYAN 295 >gi|312795723|ref|YP_004028645.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Burkholderia rhizoxinica HKI 454] gi|312167498|emb|CBW74501.1| Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) [Burkholderia rhizoxinica HKI 454] Length = 298 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 80/234 (34%), Positives = 120/234 (51%), Gaps = 19/234 (8%) Query: 25 SDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 +DVE + ++Y + GGKR+RPML A L G ACA+E IH +L+HD Sbjct: 30 ADVEPMQLHQAMRYAVLGGGKRVRPMLCHAAGQALGAPGQRLDAAACALELIHVYSLVHD 89 Query: 83 DVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSLV 136 D+ +RRGK + + T +LVGD L SQAF + +E Q AL + + Sbjct: 90 DLPSMDDDDMRRGKPTVHVQYDEATGLLVGDALQSQAFIALASDALEAHRQAAL--MREL 147 Query: 137 ACT-----LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA-GVQNS 189 AC +A G+ L S+ L T+ + +H + KT L AA+++ +L G+ Sbjct: 148 ACASGSLGMAGGQAIDLASVGTRLSRTQLETMH--RMKTGALLRAAVKMGALCGDGLSAD 205 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + L +Y +G+AFQ+VDD+LD + +GK G+D N KPT I+ Q Sbjct: 206 IEAGLDAYAKAVGLAFQVVDDILDVTADSATLGKTAGKDAANDKPTYVSIIGLQ 259 >gi|46015923|pdb|1V4J|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima V73y Mutant gi|46015924|pdb|1V4J|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima V73y Mutant Length = 299 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 108/184 (58%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E H A+LLHDDV+D + RRGK ++G++ +V GD +L AF Sbjct: 60 GEDAISSLAALELYHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEIGNNKLRRAFLNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|226941241|ref|YP_002796315.1| IspA [Laribacter hongkongensis HLHK9] gi|226716168|gb|ACO75306.1| IspA [Laribacter hongkongensis HLHK9] Length = 297 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 14/216 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y GGKR+RP+L A + + ACA+E IH +L+HDD+ +DD Sbjct: 37 DAMRYAALDGGKRVRPLLVFAAGDVSGATPEALSAAACAVECIHAYSLVHDDLPCMDDDV 96 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-------VIETKSQEALEALSLVACT--L 140 LRRGK + G ++L GD L + AF + V+ + + AL+ A + Sbjct: 97 LRRGKPTCHIAHGEAMALLAGDALQAHAFELLAIPLPGVVPARQLAMVSALAHAAGPRGM 156 Query: 141 AEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ L+ + LD T +Y+H +K T L AA+ + +L + AL Y Sbjct: 157 CGGQAIDLAAVGHALDQTALEYMHCLK--TGALIQAAVRLGALAGSPDDDELAALDRYAR 214 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +G+AFQ++DDVLD + +GK G+D + KPT Sbjct: 215 RIGLAFQVIDDVLDCEADSATLGKTAGKDAAHDKPT 250 >gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1] gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160 [Aromatoleum aromaticum EbN1] Length = 298 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 135/259 (52%), Gaps = 23/259 (8%) Query: 20 LKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L+ + D + P + ++Y + GGKR+RP+L A ++ + +ACA+E IH Sbjct: 21 LENLLPDANIAPARLHEAMRYAVLGGGKRIRPLLVHAAGGLVGAAPERLDKVACAVELIH 80 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEA 132 +L+HDD+ +D+ LRRGK + + + T++LVGD L + AF + E +++ E Sbjct: 81 AYSLVHDDLPCMDNDVLRRGKPTVHVEYDDATALLVGDSLQALAFQSLSEHPLTEDPSEQ 140 Query: 133 LSLV--------ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 LS++ + +A G+ L ++ K L E +Y+H+ KT L A++ + + Sbjct: 141 LSMITQLARASGSRGMAGGQAIDLAAVGKQLSREELEYMHI--HKTGALIRASVLLGAAC 198 Query: 184 AGVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +S R + L YG +G+ FQ+VDD+LD + + +GK G+D N KPT +L Sbjct: 199 GARLDSDRLERLDHYGKLVGLLFQVVDDILDTQSDTATLGKTAGKDADNNKPTYVTLL-- 256 Query: 243 QRGTKREKNFWKSTINDGK 261 G + +S + D + Sbjct: 257 --GMTEARALAESLLADAR 273 >gi|209963898|ref|YP_002296813.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW] gi|209957364|gb|ACI98000.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW] Length = 296 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 127/251 (50%), Gaps = 10/251 (3%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 T++ +E ++L R+ + + ++Y GGKRLRP L + +A + + Sbjct: 12 TVEQVEAAIDVLLPRVDLPEARLFEAMRYGCLGGGKRLRPFLVMESARLFGVNPACALRA 71 Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A A+EFIH +L+HDD+ +DDS LRRG+ L + T++L GD LL+ AF ++ + + Sbjct: 72 AAAVEFIHCYSLVHDDLPAMDDSDLRRGRPTLHLEYDEATAILAGDALLTVAFEILADPE 131 Query: 126 SQEALEALSLVACTLAEGE-LRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFSAAL 177 + E + + LA+ R + + LD+ ED I + KT L + + Sbjct: 132 THEDAQVRCRLVSALAKAAGPRGMVGGQMLDLMAEDRTFDIGAITRLQRLKTGELIAFSA 191 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +++ AL++Y +LG+AFQ+ DD+LD G E GK++G D K T Sbjct: 192 TAGAILGRASPPQHHALQAYAHDLGLAFQIADDLLDVEGTEAETGKSVGRDEGANKATFV 251 Query: 238 VILAFQRGTKR 248 IL +R ++ Sbjct: 252 SILGVERAREQ 262 >gi|169837010|ref|ZP_02870198.1| Dimethylallyltransferase [candidate division TM7 single-cell isolate TM7a] Length = 269 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 124/242 (51%), Gaps = 21/242 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---DNHVLLACAIEFIHTATLLHDDV 84 E + ++Y + +GGKR+RP+L + + D +A A+EFIH +L+HDD+ Sbjct: 34 EKLAKAMEYAVMNGGKRIRPILMYMICDLFDENKKSYDKIKEIAVALEFIHCYSLVHDDL 93 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----- 137 +D+ RRGK+ + VLVGD LL++AF +V K+ E + +++ Sbjct: 94 PAMDNDDYRRGKLTVHKKYNEAIGVLVGDVLLTEAFGVVASAKNLEDKSKVQIISKLSEY 153 Query: 138 ---CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G+ + S K +++ Y+H KT L +AA+E+ + ++N Q Sbjct: 154 AGFFGMVGGQFVDIESEHKKVEIDTLKYIHA--HKTGKLLTAAIELPMIALNIENEKYQK 211 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 + Y LGIAFQ+ DD+LD G E+GK D N K P+ILAF G R K ++ Sbjct: 212 MVEYSKLLGIAFQIKDDILDIEGNFEEIGKK-SNDVENEK---PLILAF-LGWMRAKGYF 266 Query: 254 KS 255 ++ Sbjct: 267 RN 268 >gi|126348010|emb|CAJ89730.1| putative farnesyl diphosphate synthase [Streptomyces ambofaciens ATCC 23877] Length = 347 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 3/205 (1%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 + GGK +RP L L +A+ + V A A+E +H TLLHDDV+D ALRR + AA Sbjct: 59 VSGGGKAVRPALALLSAVAVGADPAAAVPGAVAVELVHDFTLLHDDVIDGDALRRHQPAA 118 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS-LVAC--TLAEGELRQLSLSKNL 154 ++G +VL GD LL A + + + A A+ LVA L EG+ ++ K Sbjct: 119 WSLFGTPAAVLTGDALLVAALRALTQASPRRAGAAVQELVAALLELVEGQSHDVAFEKAH 178 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 DV+ DYL + KT L A + ++AG L+ +G +LG+AFQ DD+L Sbjct: 179 DVSVADYLTMAAGKTGALIGCACALGGVLAGADAVRVGGLREFGRHLGVAFQCADDILGI 238 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVI 239 G GK +G D K +LPV+ Sbjct: 239 WGRSARSGKPVGADLAARKKSLPVV 263 >gi|29828193|ref|NP_822827.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] gi|29605295|dbj|BAC69362.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] Length = 376 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 4/239 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L + +A + V A A+E +H +LLHDD++D RR + V Sbjct: 85 GGKAVRPALAVLSAQAAGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 144 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ + L +G+ + +S VT Sbjct: 145 HGPAQAILVGDALFALANEILLELGTVEAGRATRRLTTASRALIDGQAQDISYEHRERVT 204 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 205 VEECLEMEGNKTGALLACACSIGAVLGGADDRTADTLEKYGYHLGLAFQAVDDLLGIWGD 264 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS-VENLKKAFIIMR 275 GK D R K +LPV+ A G + + D K S EN + R Sbjct: 265 PESTGKQTWSDLRQRKKSLPVVAALAAGGPASRRLGELLAEDAKSSDFENFSEEEFAAR 323 >gi|91777309|ref|YP_552517.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400] gi|91689969|gb|ABE33167.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400] Length = 293 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 120/222 (54%), Gaps = 13/222 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + R + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIETKSQEALE---ALSLVACTLAE 142 LRRGK + + T++LVGD L SQAF V+ Q AL AL+ + + Sbjct: 94 LRRGKPTVHVKYDEATALLVGDALQSQAFVALTSDVLAPAQQAALVRELALASGSVGMCG 153 Query: 143 GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSYGMN 200 G+ L S+ L T+ + +H + KT L AA+ + +L ++ ++L +Y Sbjct: 154 GQAIDLASVGHTLTRTQLETMH--RMKTGALLRAAVRMGALAGETPDAAAMRSLDAYSAA 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D ++GKPT I+ Sbjct: 212 VGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGL 253 >gi|293400618|ref|ZP_06644763.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305644|gb|EFE46888.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 280 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%) Query: 20 LKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L+ IC ++ + D ++Y + +GGKR+RP + LA +A AIE IHT Sbjct: 8 LQHICDALQDSKVKDAMQYSLMAGGKRIRPQILLAALQCYGIEERVGYPVAAAIEMIHTY 67 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL----- 130 +L+HDD+ +DD LRRGK + + T++L GD LL+QAF ++ S++A+ Sbjct: 68 SLIHDDLPAMDDDTLRRGKPTCHVQFDEATAILAGDALLTQAF-LLGAMASEDAMVNCAI 126 Query: 131 -EALSLVACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +ALS A + G+++ L D+T + + KT L + L ++ + + Sbjct: 127 VKALSRYAGADGMVLGQIKDLEGEVKEDLTLAELKDIHYYKTGRLLTLPLVCAAYLTHHE 186 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + A + G +LG++FQ+ DD+LD V E+GKNI D +N K T +L + K Sbjct: 187 EDI-PAWEQIGSDLGLSFQIQDDILDVTSTVEELGKNINSDAQNNKRTYVSLLGIEEAQK 245 Query: 248 REKNFWK 254 +++ Sbjct: 246 EASFYYE 252 >gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina MBIC11017] gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina MBIC11017] Length = 301 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 72/236 (30%), Positives = 116/236 (49%), Gaps = 11/236 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP+L LA + + + ACA+E IHT +L+HDD+ + Sbjct: 36 EKIYEAMRYSLLAGGKRLRPILCLAACELAGGTIEMAMPTACALEMIHTMSLIHDDLPAM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVA------- 137 D+ RRGK +G ++L GD LL+ A+ V IET+ + L +VA Sbjct: 96 DNDDFRRGKPTNHKKYGEDIAILAGDGLLAYAYEHVAIETQQVPPEQVLKVVARLGHAVA 155 Query: 138 -CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ L DVT + KT L A++ + +AG + Sbjct: 156 ATGLVGGQVVDLESEGAEDVTLSTLNFIHAHKTGALLEASVLSGAELAGASQDLLNRCSK 215 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 + N+G+AFQ++DDVLD ++GK G+D K T P + ++ ++ Sbjct: 216 FARNIGLAFQIIDDVLDVTATSEKLGKTAGKDVAAQKATYPSLWGIPESKRQAQHL 271 >gi|326564543|gb|EGE14769.1| geranyltranstransferase [Moraxella catarrhalis 46P47B1] gi|326567053|gb|EGE17175.1| geranyltranstransferase [Moraxella catarrhalis BC1] Length = 351 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 79/231 (34%), Positives = 118/231 (51%), Gaps = 23/231 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--NH-----------VLLACAIEFI 74 E + +Y + +GGKR+RP+L L+T LML GD NH A+E I Sbjct: 75 EPLNKACRYAMSNGGKRVRPLLVLSTFLMLIQTGDHKNHKNNLTKKIQMLFRAMMAVELI 134 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE-ALE 131 H+ +L+HDD+ +DD ALRRG+ +V+G ++L GD L S AF ++ E + A + Sbjct: 135 HSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALLAGDALQSIAFEVLFECYDKNSADD 194 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIA 184 A++ L R++ + LD+ E D L I + KT L AA+ + ++ A Sbjct: 195 AIAYKLAKLLSCRARRMVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICA 254 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 VQ LK Y +G+AFQ+ DDVLD + +GK G D + K T Sbjct: 255 DVQTDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGKPAGSDEKLEKST 305 >gi|220931495|ref|YP_002508403.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168] gi|219992805|gb|ACL69408.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168] Length = 296 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 122/223 (54%), Gaps = 10/223 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 +KY +FSGGKRLRP+LTL A ML+ D+ + + +IE +HT +L+HDD+ R Sbjct: 40 MKYSLFSGGKRLRPILTLMVAEMLDGDRDSALRVGASIELVHTYSLIHDDLPSMDDDDFR 99 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVAC--TLAEGE 144 RGK + V+G T++L GD LL+ AF ++ + K + +E +S A + G+ Sbjct: 100 RGKPSNHKVFGTATAILAGDALLTFAFNILSKLNLPPDKVLKIIEVISQGAGHNGMVGGQ 159 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L +++ +++ E+ + KT LF +++ + A + AL+ Y LG+ Sbjct: 160 VLDLE-AEDKEISLEELKKIHSGKTGALFKSSILAGAYCANPDRTELTALERYARYLGLT 218 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 FQ+VDD+LD G +GK +G D K T P +L ++ K Sbjct: 219 FQIVDDILDVTGNEEVLGKRVGRDDELNKATYPRLLGLKQAVK 261 >gi|115739673|ref|XP_781598.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115924911|ref|XP_001192439.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 300 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 97/183 (53%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ +A E IHTA+L+HDDV+D + RRGK + ++G + S+L GDF+LS + + Sbjct: 45 DSQKKIAMITEMIHTASLMHDDVIDAADTRRGKTSINELFGQRKSILAGDFVLSISSQAL 104 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + + LS V L +GE QL N + YL KTA L + + + Sbjct: 105 ARIGDPDVVIVLSTVIEDLVKGEFMQLGSKDNENERFSHYLMKTYKKTASLMAHSCRAVA 164 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A V + YG N+G+AFQLVDD+LD+ + MGK D + G T PV+ A Sbjct: 165 MLADCSPEVCEIAYQYGRNIGMAFQLVDDILDFVSCDDAMGKPTSADLKLGLATAPVLFA 224 Query: 242 FQR 244 ++ Sbjct: 225 AEK 227 >gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453] gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453] Length = 301 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 77/254 (30%), Positives = 132/254 (51%), Gaps = 21/254 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + Y + +GGKR+RP+L +A D + +ACA+E +HT +L+HDD+ Sbjct: 34 ETLHKSMSYSLMAGGKRMRPLLVIAACEAGGGSRDAAIPVACAVEMVHTYSLVHDDLPAM 93 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAE 142 RRGK V+G +++L GD LL+ AF +I+ Q + A LS+V LAE Sbjct: 94 DDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSIIQASRQFGVPAERVLSIVE-DLAE 152 Query: 143 ---------GELRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 G++ + + L E+ +Y+H+ K+ ++FS L IAG + + Sbjct: 153 YAGPRGMVGGQVADMEGEQGLTTLEQLEYIHLHKTSDLIMFS--LMAGGHIAGCTEAQIE 210 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF---QRGTKRE 249 +L+ +G ++G+AFQ+ DD+LD G+ +++GK + D + K T P + +R +R Sbjct: 211 SLRIFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDPSRREVERL 270 Query: 250 KNFWKSTINDGKIS 263 K I +G + Sbjct: 271 TAEAKRVITEGNFN 284 >gi|302524796|ref|ZP_07277138.1| farnesyl diphosphate synthase [Streptomyces sp. AA4] gi|302433691|gb|EFL05507.1| farnesyl diphosphate synthase [Streptomyces sp. AA4] Length = 340 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 102/205 (49%), Gaps = 1/205 (0%) Query: 43 KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102 K LRP L L A ++ V A A+E H +LLHDDV+D RR + A V+G Sbjct: 63 KALRPALVLLCAEACGGDPEDAVPAAVAVELAHNFSLLHDDVMDGDRTRRHRPTAWTVFG 122 Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162 +VL GD LL+ AF V+ A LS L G+ L+ + DV + + Sbjct: 123 TGQAVLAGDSLLALAF-DVLSADGPAAARLLSTAVLDLLHGQHEDLAFEQRTDVEVAECV 181 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + + KTA L SAA + L+ G + + +G +LG+AFQ VDD+L G+ G Sbjct: 182 RMAQGKTAALLSAACTLGVLVVGGRGEHVERFGRFGRSLGLAFQHVDDLLGIWGDPAVTG 241 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTK 247 K + D R+ K +LPV+ A GT Sbjct: 242 KPVYSDLRSRKKSLPVVAALASGTS 266 >gi|303257087|ref|ZP_07343101.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47] gi|302860578|gb|EFL83655.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47] Length = 300 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 121/223 (54%), Gaps = 13/223 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + GGKR+RP+L A + + +N L A A+E +H+ +L+HDD+ +D+ LR Sbjct: 38 MRYSVIGGGKRVRPLLVYAVGQIYDADPENLDLTALAVECVHSYSLIHDDLPCMDNDILR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACT-----LAEGE 144 GK +G ++L GD L +AF ++ TK +++ ++ + L+A + G+ Sbjct: 98 HGKPTTHTAFGEAVAMLAGDALQPEAFLFLVRTKLPAEQRIKLVELLAYASSTRGMCGGQ 157 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ---ALKSYGMNL 201 LS+ N +T E+ + KT L A++ + + AG + + L+ YG + Sbjct: 158 AIDLSVVGNQKMTIEELRLMHSMKTGALLKASVLLGAF-AGKKTPSQHDLSQLEVYGNAI 216 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G+AFQ+VDD+LD G+ E+GK G+D KPT +L ++ Sbjct: 217 GLAFQIVDDILDVVGDTAELGKTAGKDALGDKPTYVSLLGLEK 259 >gi|329928274|ref|ZP_08282174.1| putative heptaprenyl pyrophosphate synthase component 2 [Paenibacillus sp. HGF5] gi|328937953|gb|EGG34355.1| putative heptaprenyl pyrophosphate synthase component 2 [Paenibacillus sp. HGF5] Length = 334 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 20/252 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKY-----LIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D+ + L+ + + SD ++ P V LI +GGKRLRP++ + + E + V Sbjct: 10 DLASFDRLLREVVSSDRDLPPSSVVLSSVMDLINAGGKRLRPLMVVLGSRFGESGHEPAV 69 Query: 66 L-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--- 121 + A +E++H A+L+HDD++D S +RRG QT+V +G++++++A Sbjct: 70 MKTAVLLEYLHMASLVHDDIIDQSDMRRGMPTLHETTDVQTAVHIGNYMIARAIEWAAGH 129 Query: 122 -----------IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170 I L L+ + L GE QL + +T E YL + KTA Sbjct: 130 PGGDPDGNSEDISEDEAYRLAELAALVTELCMGEYDQLQHRFDFGLTMEQYLEKTRCKTA 189 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 +L + L+ + A + L +G +LG+AFQ+ DD+LD+ +GK G D R Sbjct: 190 LLMAHCLKAGAEAAHADAGTAERLFQFGESLGMAFQIRDDLLDFTEPKEAIGKPAGADLR 249 Query: 231 NGKPTLPVILAF 242 NG TLPV+ A Sbjct: 250 NGNITLPVLYAL 261 >gi|296159644|ref|ZP_06842467.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1] gi|295890088|gb|EFG69883.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1] Length = 293 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 116/222 (52%), Gaps = 13/222 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + R + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL- 148 LRRGK + + T++LVGD L SQAF + A +A + LA G + Sbjct: 94 LRRGKPTVHVKYDEATALLVGDALQSQAFVALTSEVLAPAQQAALVRELALASGSIGMCG 153 Query: 149 -------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMN 200 S+ L T+ + +H + KT L AA+ + +L ++ ++L +Y Sbjct: 154 GQAIDLASVGHTLTRTQLETMH--RMKTGALLRAAVRMGALAGETPDADAMRSLDAYSAA 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D ++GKPT I+ Sbjct: 212 VGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGL 253 >gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM 17244] gi|169259366|gb|EDS73332.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM 17244] Length = 294 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 124/236 (52%), Gaps = 15/236 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y +F GGKR+RP+L + + + + + L A+E IHT +L+HDD+ +DD LRRG Sbjct: 37 YSLFVGGKRIRPILLMESCKCVGGDTNEALPLMAAMEMIHTYSLIHDDLPCMDDDELRRG 96 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEAL----EALSLVACT-----LAEG 143 K V+G T++L GD LL+ A+ M+ KS + + EA++++A + + G Sbjct: 97 KPTNHTVYGEATALLAGDSLLNLAYETMLKGAKSSKDINRYVEAMNVIADSAGVKGMIAG 156 Query: 144 ELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 ++ + S K D D++H +KT + A++ +++ G + + L Y +G Sbjct: 157 QVMDMESEGKEPDGETLDFIH--DNKTGAILRASVISGAVVGGATDDELKNLSEYARAIG 214 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + FQ+VDD+LD + +GK +G D K T P + +R ++ ++N Sbjct: 215 LMFQVVDDILDVVSDEETLGKKVGMDSERNKMTYPYVYGLERSYEKVDELLNISLN 270 >gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1] gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1] Length = 294 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 123/234 (52%), Gaps = 14/234 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKRLRP+LTLA + + + ACA+E +HT +L+HDD+ +D+ L Sbjct: 35 AMRYSLLIGGKRLRPILTLACCEAVGGALERAMNFACAMECVHTYSLIHDDLPAMDNDDL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCM-------VIETKSQEALEALSLVACT--LA 141 RRG +G T++L GD LL+ AF + V+ E + L++ A T + Sbjct: 95 RRGHPTCHRQYGEATAILAGDALLTHAFELAAKPVTGVLPEARLELIGELAMAAGTYGMV 154 Query: 142 EGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ + K L++ + +H+ K+ A++ A L + L G + V+ LK YG Sbjct: 155 GGQMLDIQGEKRPLELVQLQNIHIHKTG-ALIRVACLAGARLGGGTPDQVKH-LKRYGEA 212 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 LG+AFQ+ DD+LD G+ +GK G D K T P ++ + + +N + Sbjct: 213 LGLAFQITDDILDEVGDTKTLGKATGVDRALDKATYPKLMGLAQAREAAENLMQ 266 >gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis] Length = 370 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 123/228 (53%), Gaps = 15/228 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP L LA ++ + ACA+ IHT +L+HDD+ +D+ Sbjct: 106 IHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVGMIHTMSLIHDDLPCMDN 165 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEAL-----SLVAC 138 LRRGK +V+G +VL GD LL+ AF + + S + A+ ++ A Sbjct: 166 DDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAE 225 Query: 139 TLAEGELRQLSL--SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ ++ S +D+ + +++H+ KTA L A+ + +++ G + + L+ Sbjct: 226 GLVAGQVVDINSEGSSEVDLEKLEFIHI--HKTAKLLEGAVVLGAILGGGTDEEVEKLRK 283 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y +G+ FQ+VDD+LD E+GK G+D K T P +L ++ Sbjct: 284 YARGIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEK 331 >gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666] gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666] Length = 306 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 12/223 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y + GGKRLRP+L +A + + + ACA+E IH +L+HDD+ +D+ Sbjct: 45 DAMRYAVLDGGKRLRPLLVMAACEAVNGNAEAALRSACAVELIHAYSLVHDDMPCMDNDV 104 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVACT---L 140 LRRGK + +G ++L GD L + AF + ++ +Q L + A + Sbjct: 105 LRRGKPTVHVKFGEAQALLAGDALQALAFEFLTPDDGSVDAATQARLCRMLAQAAGFQGM 164 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 A G+ L+ S L +T + + KT L A++ + + + + AL+ YG Sbjct: 165 AGGQAIDLA-SVGLPLTSGQLHEMHRLKTGALLQASVMMGTACGAAPPAAQHALREYGAA 223 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+VDD+LD + +GK G+D KPT ++ Q Sbjct: 224 VGLAFQVVDDILDVTADSATLGKTAGKDAAQDKPTFVSLMGLQ 266 >gi|83312002|ref|YP_422266.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] gi|82946843|dbj|BAE51707.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] Length = 301 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 20/231 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + + ++Y+ GGKRLRP L + +A + + +ACAIE IH +L+HDD+ Sbjct: 39 VHEAMRYVTLDGGKRLRPFLVMQSASLFNVAESAAIRVACAIEMIHCYSLVHDDLPCMDD 98 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRG+ + T++L GD LL++AF +++ A A V C L +L Sbjct: 99 DDLRRGRPTCHKAFDEATALLAGDALLTKAFEVLV----NPATHADPAVRCELV-ADLAH 153 Query: 148 LSL-------------SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 S + LD+ + + KT LFS + E +++ +R AL Sbjct: 154 ASGGQGMVGGQMIDLQAHTLDLDVAGITRLQQLKTGRLFSFSCEAGAVLGKAHGELRLAL 213 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 ++Y +LG+AFQ+ DD+LD G+V E+GK + +D GK T +L +R Sbjct: 214 RNYAHDLGLAFQIADDILDVEGDVAEVGKRVNKDADAGKATFVSLLGLERA 264 >gi|302555532|ref|ZP_07307874.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736] gi|302473150|gb|EFL36243.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736] Length = 380 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 3/202 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L + +A ++ + + A A+E +H +LLHDD++D RR + V Sbjct: 89 GGKAVRPALAVLSAEVMSAAPETGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 148 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A M++E + EA A L+ L +G+ + +S VT Sbjct: 149 HGPAQAILVGDALFALANEMLLELGTVEAGRATRRLTTATRALIDGQAQDISYEHRDRVT 208 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 209 VEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLERYGYHLGLAFQAVDDLLGIWGD 268 Query: 218 VNEMGKNIGEDFRNGKPTLPVI 239 + GK D R K +LPV+ Sbjct: 269 PDSTGKQTWSDLRQRKKSLPVV 290 >gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita] gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita] gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita] Length = 377 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 119/238 (50%), Gaps = 23/238 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RPML +A ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 113 IHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDN 172 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA-----E 142 LRRGK + +G +VL GD LLS AF V E + V LA E Sbjct: 173 DDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSE 232 Query: 143 GELRQLSLSKNLDVTEE-------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G L + +DV E D+L I KTA L ++ + +++ G + L Sbjct: 233 G----LVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKL 288 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 + + +G+ FQ+VDD+LD E+GK G+D K T P ++ G ++ K F Sbjct: 289 RKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLI----GVEKSKEF 342 >gi|331000960|ref|ZP_08324597.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859] gi|329569919|gb|EGG51676.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859] Length = 300 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 121/223 (54%), Gaps = 13/223 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + GGKR+RP+L A + + +N L A A+E +H+ +L+HDD+ +D+ LR Sbjct: 38 MRYSVIGGGKRVRPLLVYAVGQIYDADPENLDLTALAVECVHSYSLIHDDLPCMDNDILR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACT-----LAEGE 144 GK +G ++L GD L +AF ++ TK +++ ++ + L+A + G+ Sbjct: 98 HGKPTTHAAFGEAVAMLAGDALQPEAFLFLVRTKLPAEQRIKLVELLAYASSTRGMCGGQ 157 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ---ALKSYGMNL 201 LS+ N +T E+ + KT L A++ + + AG + + L+ YG + Sbjct: 158 AIDLSVVGNQKMTIEELRLMHSMKTGALLKASVLLGAF-AGKKTPSQHDLSQLEVYGNAI 216 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G+AFQ+VDD+LD G+ E+GK G+D KPT +L ++ Sbjct: 217 GLAFQIVDDILDVVGDTAELGKTAGKDALGDKPTYVSLLGLEK 259 >gi|308232443|ref|ZP_07664084.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu001] gi|308379494|ref|ZP_07486502.2| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu010] gi|308380676|ref|ZP_07669246.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu011] gi|308406139|ref|ZP_07669521.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu012] gi|308213955|gb|EFO73354.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu001] gi|308356823|gb|EFP45674.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu010] gi|308360773|gb|EFP49624.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu011] gi|308364378|gb|EFP53229.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu012] Length = 354 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 4/178 (2%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETK 125 A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A ++ E Sbjct: 101 AVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECV 160 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + A+ L + L G+ L +VT +DYL + KTA L + +L+A Sbjct: 161 AVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVAN 220 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A Sbjct: 221 ADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 278 >gi|210134440|ref|YP_002300879.1| octaprenyl-diphosphate synthase [Helicobacter pylori P12] gi|210132408|gb|ACJ07399.1| octaprenyl-diphosphate synthase [Helicobacter pylori P12] Length = 307 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 77/265 (29%), Positives = 142/265 (53%), Gaps = 18/265 (6%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L+ + D +L L +E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLDEKTDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K E++ +ALS L+ GE+ + + ++ + Sbjct: 92 INALFGNFNAVMLGDVFYSKAFFEL--SKMGESIAKALSNAVLRLSRGEIEDVFVGESFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ N + +G+N G+ FQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFMEASLKSMAILL---NKDAKMYADFGLNFGMEFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAFIIM 274 + N +GK DF+ GK TLP +L +++ E+ S D +E K+ F Sbjct: 207 QDANTLGKPNFSDFKEGKTTLPYLLLYEKLNPHEQGLLISYFKQDSHEIIEWTKEKF--- 263 Query: 275 RENRALVDTEYRAYSYGQKAKDSLR 299 ++ + +T A +Y +KA ++++ Sbjct: 264 KQYGIIEETLKIAQAYSKKALEAIK 288 >gi|187921415|ref|YP_001890447.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN] gi|187719853|gb|ACD21076.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN] Length = 293 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 116/222 (52%), Gaps = 13/222 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + R + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL- 148 LRRGK + + T++LVGD L SQAF + A +A + LA G + Sbjct: 94 LRRGKPTVHVKYDEATALLVGDALQSQAFVSLTSDVLAPAQQAALVRELALASGSIGMCG 153 Query: 149 -------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMN 200 S+ L T+ + +H + KT L AA+ + +L ++ ++L +Y Sbjct: 154 GQAIDLASVGHTLTRTQLETMH--RMKTGALLRAAVRMGALAGETPDADAMRSLDAYSAA 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D ++GKPT I+ Sbjct: 212 VGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGL 253 >gi|301300958|ref|ZP_07207123.1| putative geranyltranstransferase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851425|gb|EFK79144.1| putative geranyltranstransferase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 277 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 124/232 (53%), Gaps = 14/232 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV-- 84 +++ + ++Y + +GGKR+RP+L L +A L + + +A ++E +HT +L+HDD+ Sbjct: 12 QILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPE 71 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACT 139 +D+ LRRGK +G +VL GD LL+ +F + K + + L+L A Sbjct: 72 MDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDIDNDKKIKLISQLALAAGP 131 Query: 140 --LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + G+ L SK ++ E +LH KT L A +++ ++ + L+ Sbjct: 132 QGMVSGQTDDILGESKKYNLEELKHLHA--GKTGALLRYACVAGGILSDASDNQLELLRK 189 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 YG N G+AFQ+ DD+LD G+ +GKN+ +D K T P++L Q GTK Sbjct: 190 YGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQ-GTKE 240 >gi|240948732|ref|ZP_04753104.1| geranyltranstransferase [Actinobacillus minor NM305] gi|240296948|gb|EER47526.1| geranyltranstransferase [Actinobacillus minor NM305] Length = 299 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 87/293 (29%), Positives = 149/293 (50%), Gaps = 37/293 (12%) Query: 13 EKVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLL 67 ++VN I LK+ + + D + Y + GGKR+RP L AT ML + +H Sbjct: 16 QRVNQFIEQELKQYSAHHSPLIDAMAYAVLLGGKRVRPFLIYATGRMLGVSLKALDHS-- 73 Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-- 123 A A+E IH +L+HDD+ +DD LRRGK + + T++L GD L + AF ++ + Sbjct: 74 AAAMESIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILAGDSLQTFAFELIAKDP 133 Query: 124 --TKSQEALEALSLVACTLAEG-----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 T Q+ + SL A+G L +S +K + ++E + +H ++KT L Sbjct: 134 FLTDLQKIKQIQSLAKAAGAKGMCLGQSLDLISENKAISLSELELIH--RNKTGALI--- 188 Query: 177 LEVSSLIAGVQNS-------VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 V+S++ G S ++ AL+ Y +G+AFQ+ DD+LD G+ +++GK G D Sbjct: 189 --VASVLMGFNLSDYAQDEKIKNALECYAKAIGLAFQVQDDILDVIGDTDKIGKTAGSDE 246 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKS---TINDGKISVENLK--KAFIIMREN 277 K T P +L + ++ ++ +++ +++ LK FII RE+ Sbjct: 247 SLNKSTYPKLLGLEGAMEKAQSLYQTALKALDELPFDTRALKALAHFIIQRES 299 >gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98] Length = 297 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 130/262 (49%), Gaps = 29/262 (11%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + D + Y + +GGKRLRP+L AT + + ACA+E IHT +L+HDD Sbjct: 30 CPNV--LRDAMTYSLEAGGKRLRPLLLFATLHAFGKERELGIGAACALEMIHTYSLIHDD 87 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---------ETKSQEALE- 131 + LRRGK V+G +VL GD LL+ AF +V E K + ALE Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVVSAYNYEGISSEIKLRLALEL 147 Query: 132 -----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +VA +A+ E K+L + E +Y+H K KT L A+ +++AG Sbjct: 148 AKAAGPEGMVAGQVADMEAE----GKHLTLNELEYIH--KHKTGRLLEFAVLAGAILAGA 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + A Sbjct: 202 TKEEEEKLLAFAKYVGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFAIDEA- 260 Query: 247 KREKNFWKSTINDGKISVENLK 268 K+ + TI K ++ +L+ Sbjct: 261 ---KSILEETIAKAKDAIMSLQ 279 >gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Bacillus pumilus ATCC 7061] gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Bacillus pumilus ATCC 7061] Length = 296 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 77/237 (32%), Positives = 121/237 (51%), Gaps = 33/237 (13%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHD 82 IP+ +K Y + +GGKRLRP+L LA +L G N + + CA+E IHT +L+HD Sbjct: 29 IPEDLKSSMLYSLKAGGKRLRPVLVLA---LLNAYGKNEEDGIPVGCAVEMIHTYSLIHD 85 Query: 83 DVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ------------- 127 D+ LRRGK V+G T+VL GD LL+++F ++ S Sbjct: 86 DLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSSSVSADKKLRIVDE 145 Query: 128 --EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++ AL +V + E Q K + + E + +H K+ + FS A +++AG Sbjct: 146 LVKSAGALGMVGGQFDDMEAEQ----KQVSLAELESIHARKTGKLLTFSVA--AGAMLAG 199 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + + L+ + ++GIAFQ+ DD+LD G ++GK +G D N K T P +L Sbjct: 200 ASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSDTANEKSTYPSLLTL 256 >gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana] Length = 348 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 82/252 (32%), Positives = 130/252 (51%), Gaps = 36/252 (14%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--V 85 I + ++Y + + GKR+RP+L +A ++ G+ V L ACA+E IHT +L+HDD+ + Sbjct: 82 IHEAIRYSLLARGKRVRPVLCIAACELVG--GEESVALPAACAVEMIHTMSLIHDDLPCM 139 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D+ LRRGK V+G +VL GD L+S AF + + A+S A GEL Sbjct: 140 DNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLATST------AVSPARVVRAIGEL 193 Query: 146 RQLSLSKNL----------------DVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + SK L DV E +++HV KTAVL AA + +++ G Sbjct: 194 AKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHV--HKTAVLLEAATVLGAIVGGGS 251 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++ G + Sbjct: 252 DEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLM----GLE 307 Query: 248 REKNFWKSTIND 259 + K+F ++D Sbjct: 308 KSKDFADKLLSD 319 >gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5] gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5] Length = 304 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 125/230 (54%), Gaps = 18/230 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + Y + +GGKR+RP+L +A + V +ACA+E +HT +L+HDD+ Sbjct: 37 ETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDLPAM 96 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAE 142 RRGK V+G +++L GD LL+ AF VI+ + + A LS+V LAE Sbjct: 97 DDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSVIQAARKHGVPAERVLSIVE-DLAE 155 Query: 143 ---------GELRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 G++ + + + E+ +Y+H+ K+ ++FS L +AG ++ + Sbjct: 156 YAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFS--LMAGGHVAGCSDAQIE 213 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +L+++G ++G+AFQ+ DD+LD G+ +++GK + D + K T P + Sbjct: 214 SLRTFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYPYFIGL 263 >gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10] gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10] Length = 307 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 123/229 (53%), Gaps = 16/229 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + Y + +GGKR+RP+L +A + V +ACA+E +HT +L+HDD+ Sbjct: 40 ETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDLPAM 99 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLV------ 136 RRGK V+G +++L GD LL+ AF VI+ + + A LS+V Sbjct: 100 DDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSVIQAARKHGVPAERVLSIVEDLAVY 159 Query: 137 --ACTLAEGELRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G++ + + + E+ +Y+H+ K+ ++FS L +AG +S ++ Sbjct: 160 AGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFS--LMAGGHVAGCSDSQIES 217 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 L+++G ++G+AFQ+ DD+LD G+ +++GK + D + K T P + Sbjct: 218 LRTFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYPYFIGL 266 >gi|269792514|ref|YP_003317418.1| Geranyltranstransferase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100149|gb|ACZ19136.1| Geranyltranstransferase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 305 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 86/243 (35%), Positives = 131/243 (53%), Gaps = 19/243 (7%) Query: 20 LKRICSD-VEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 L+R+CS + +P + Y + +GGKRLRP+L L A G + LA A E I Sbjct: 25 LERLCSSRPKRVPSRLWSAMVYSLTAGGKRLRPVLCLMAAEAFGLEGQRVMPLALAFEMI 84 Query: 75 HTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEAL 130 HTA+L+HDD+ LRRGK +V+G ++L GD LL+ AF IE + + Sbjct: 85 HTASLIHDDLPCMDDDDLRRGKPTNHVVFGEAMALLAGDALLALAFESAIEGLMANHFSG 144 Query: 131 EALSLVACTLAEGE-LRQLSLSKNLDVTEEDY---------LHVIKSKTAVLFSAALEVS 180 E +SL +LA+ + +++D+ ED + V +SKT VL +++LE Sbjct: 145 ELISLAVMSLAKATGPSGICGGQSMDMGFEDMGQLGPDRRVMEVARSKTGVLIASSLEGG 204 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG ++ YGM LG AFQ+ DD+LD G+V E+GK++G+D GK T + Sbjct: 205 AIMAGADEDALSNVRGYGMALGKAFQVADDILDVTGKVEEIGKSVGKDQAQGKVTFVAVH 264 Query: 241 AFQ 243 Q Sbjct: 265 GLQ 267 >gi|309753137|gb|ADO85593.1| PenB [Streptomyces exfoliatus] Length = 337 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 120/231 (51%), Gaps = 3/231 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L L +A + + + A A+E +H +L+HDD++D RR + +W Sbjct: 53 GKAVRPALALLSAEAVGAPPEVALPGAVAVELVHNFSLVHDDLMDGDEERRHRRTVWKLW 112 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDVTE 158 G+ +++L GD LL+ A ++++T A A L+A T L G+++ L+ + VT Sbjct: 113 GSSSAILTGDALLALAQEVLLDTGLPTAAPAARLLARTTRHLIRGQVQDLAFEQRSHVTV 172 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 E+ + + KT L SA+ + +++AG + AL YG +G+AFQLVDDVL G+ Sbjct: 173 EECVDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDDVLGIWGDP 232 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 GK + D R+ K +LPV A +G G+ E L++ Sbjct: 233 AVTGKPVHSDLRSRKKSLPVSHALNQGGPLSDELAAWLTTPGEPDEEELRR 283 >gi|323137013|ref|ZP_08072093.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242] gi|322397774|gb|EFY00296.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242] Length = 310 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 72/229 (31%), Positives = 114/229 (49%), Gaps = 12/229 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y+ GGKRLRP L + +A + G + + ACA+E IH +L HDD+ Sbjct: 46 EAMRYVSLGGGKRLRPFLVIESARLFGVEGASALRTACALEMIHCYSLAHDDLPAMDDDD 105 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLVACTLAEGELRQL 148 LRRG+ A + T++L GD LL+ AF +V + + +A +SLV L + Sbjct: 106 LRRGRPTAHKAFDEATAILAGDGLLTYAFDVVADPATHPDASLRVSLVLALARAAGLGGM 165 Query: 149 SLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + LD+ E + + + KT L A++ ++ G + ++AL+ YG Sbjct: 166 VGGQALDLAAETAATPLSQAETMQMQAMKTGALLRFAVDAGGILGGAAPAQKKALRRYGE 225 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 LG AFQ+ DD+LD G+ +GK G+D GK TL +L R Sbjct: 226 ALGAAFQIADDILDAEGDTAALGKRAGKDAERGKATLVSLLGLDAARTR 274 >gi|227544389|ref|ZP_03974438.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A] gi|300909750|ref|ZP_07127211.1| geranyltranstransferase [Lactobacillus reuteri SD2112] gi|227185652|gb|EEI65723.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A] gi|300893615|gb|EFK86974.1| geranyltranstransferase [Lactobacillus reuteri SD2112] Length = 290 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 79/250 (31%), Positives = 129/250 (51%), Gaps = 16/250 (6%) Query: 13 EKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLAC 69 E++ + K + +D++ + + Y + +GGKRLRP LTL T ML D+ + A Sbjct: 10 EQIEDYLSKSLATDIDQATLESSMSYSLMAGGKRLRPALTLTTIEMLGGTLNDDLLRAAS 69 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--- 124 A+E +HT +L+HDD+ +D+ LRRGK +G + L GD LL+ AF V + Sbjct: 70 ALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVADNHLP 129 Query: 125 ---KSQEALE-ALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 +SQ LE A + + G+ R + ++L++ + YLH + KT L A+ Sbjct: 130 ANVRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLNLNQLKYLH--RQKTGELIRYAVLA 187 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++ ++Q L ++G N G+AFQ+ DD++D EMGK + +D K T P + Sbjct: 188 GGIMMDQSAEIKQELAAFGENYGLAFQIYDDLMDVLSTTEEMGKAVRKDADEQKNTYPGL 247 Query: 240 LAFQRGTKRE 249 L G K + Sbjct: 248 LGID-GAKEQ 256 >gi|254552488|ref|ZP_05142935.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 247 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 4/178 (2%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETK 125 A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A ++ E Sbjct: 64 AVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLTDECV 123 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + A+ L + L G+ L +VT +DYL + KTA L + +L+A Sbjct: 124 AVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVAN 183 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A Sbjct: 184 ADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 241 >gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2] gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2] Length = 296 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 120/240 (50%), Gaps = 29/240 (12%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L LA A L + +A A+E IHT +L+HDD+ Sbjct: 34 EAMRYSLLAGGKRIRPILCLAAAEALPTDSRPLLPVAAALECIHTYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---IETKSQEALEALSLVACTLA----- 141 LRRG +G ++L GD LLS AF ++ + TK+ A E L L+ A Sbjct: 94 LRRGNPTCHKKFGEAAAILAGDGLLSFAFELLARPLATKNISAGEQLHLIGNIAAAIGPM 153 Query: 142 ----------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 E E RQ+ L E + + KT L + A++ ++ G Sbjct: 154 GMVGGQVLDIEAEGRQIEL--------EQLQQIHRCKTGALITVAVQSGAIGGGADRRQY 205 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +AL SYG +G+AFQ+VDD+L+ G+ +GK G D GK T P +L + T+R+ + Sbjct: 206 EALTSYGEQIGLAFQIVDDLLNVTGDSTTLGKAAGSDAARGKATYPALLGLE-ATRRQAD 264 >gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360] gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360] gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313] Length = 298 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 15/224 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + +GGKRLRP+L+LA ML + + ACA+E IHT +L+HDD+ +D+ R Sbjct: 39 MRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFR 98 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLVACTLAEGELRQLS 149 RG+ V+G ++L GD LL+ AF +++E K+ + A + + Sbjct: 99 RGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMI 158 Query: 150 LSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + +D+ E + +H + KT L A + ++++ G Q L + N Sbjct: 159 AGQVIDLESEGKQVDNEILNRMH--RLKTGALIKAPVVSAAILCGADADDIQKLDEFAEN 216 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+AFQ+ DD+LD G ++GK +G D N K T + ++ Sbjct: 217 LGLAFQIKDDILDVEGSSEKLGKKVGSDADNNKSTYVTVYGLEK 260 >gi|49259554|pdb|1VG2|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima A76y Mutant Length = 299 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 108/184 (58%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E +H +LLHDDV+D + RRGK ++G++ +V GD +L AF Sbjct: 60 GEDAISSLAALELVHLYSLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEIGNNKLRRAFLNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|291538771|emb|CBL11882.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis XB6B4] Length = 296 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 12/216 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y +GGKRLRP+L L T + R AIE IHT +L+HDD+ +D+ Sbjct: 34 EAMNYSFLAGGKRLRPILMLETYRLFGGRSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDE 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACT----- 139 RRGK +V+G ++L GD LL+ AF + IE ++ +A+ +++ Sbjct: 94 YRRGKKTTHVVYGEAMAILAGDALLTYAFETAAKALDIEPQNPGIGKAIRILSAKAGIYG 153 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + G+ + D+T+E + + KT+ L A++ + +++AG S ++ +++ Sbjct: 154 MVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKIVEAVAS 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +G+AFQ+ DD+LD + +GK IG D +N K T Sbjct: 214 KVGLAFQIQDDILDVTSTMEVLGKPIGSDEKNHKST 249 >gi|261379616|ref|ZP_05984189.1| geranyltranstransferase [Neisseria subflava NJ9703] gi|284798098|gb|EFC53445.1| geranyltranstransferase [Neisseria subflava NJ9703] Length = 298 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 25/282 (8%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L +P + ++Y+ GGKRLRP+L LA + + E + AIE Sbjct: 20 LLLAHFLPSESQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 +H +L+HDD+ +D+ +LRRGK + + T++LVGD L +QAF ++ A Sbjct: 80 VHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRPTGLPAER 139 Query: 132 ALSLVAC--------TLAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 L++++ +A G+ L+ + K ++ E + +H +K T L AA+ + +L Sbjct: 140 QLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLK--TGALIRAAVALGAL 197 Query: 183 -IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + Q L Y LG+AFQ++DDVLD + +GK G+D N KPT ++ Sbjct: 198 SCPDLTPAQIQTLDRYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMG 257 Query: 242 FQRGTKREKNFWKSTI------NDGKISVENLKKAFIIMREN 277 Q + + D + + L K F+ R+N Sbjct: 258 LQAARTYAETLIAEAVALIEPFGDKALRLRQLAK-FVTARKN 298 >gi|15224197|ref|NP_179452.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75268021|sp|Q9ZU77|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7, chloroplastic; Short=GGPP synthase 7; Short=GGPS7; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7; AltName: Full=Dimethylallyltranstransferase 7; AltName: Full=Farnesyl diphosphate synthase 7; AltName: Full=Farnesyltranstransferase 7; AltName: Full=Geranyltranstransferase 7; Flags: Precursor gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP synthetase/farnesyltranstransferase [Arabidopsis thaliana] gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana] Length = 347 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 82/252 (32%), Positives = 130/252 (51%), Gaps = 36/252 (14%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--V 85 I + ++Y + + GKR+RP+L +A ++ G+ V L ACA+E IHT +L+HDD+ + Sbjct: 82 IHEAIRYSLLARGKRVRPVLCIAACELVG--GEESVALPAACAVEMIHTMSLIHDDLPCM 139 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D+ LRRGK V+G +VL GD L+S AF + + A+S A GEL Sbjct: 140 DNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLATST------AVSPARVVRAIGEL 193 Query: 146 RQLSLSKNL----------------DVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + SK L DV E +++HV KTAVL AA + +++ G Sbjct: 194 AKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHV--HKTAVLLEAATVLGAIVGGGS 251 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++ G + Sbjct: 252 DEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLM----GLE 307 Query: 248 REKNFWKSTIND 259 + K+F ++D Sbjct: 308 KSKDFADKLLSD 319 >gi|47095946|ref|ZP_00233549.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854] gi|254898472|ref|ZP_05258396.1| hypothetical protein LmonJ_01615 [Listeria monocytogenes J0161] gi|254912037|ref|ZP_05262049.1| geranyltranstransferase [Listeria monocytogenes J2818] gi|254936364|ref|ZP_05268061.1| geranyltranstransferase [Listeria monocytogenes F6900] gi|47015692|gb|EAL06622.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854] gi|258608955|gb|EEW21563.1| geranyltranstransferase [Listeria monocytogenes F6900] gi|293590003|gb|EFF98337.1| geranyltranstransferase [Listeria monocytogenes J2818] Length = 293 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 18/258 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y I +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEGEL 145 K V+G+ T++L GD LL+ AF ++ E + ++L+ A + G+L Sbjct: 98 KWTNHKVFGDATAILAGDALLTLAFSILAEDDNLSFETRIALINQISFSSGAEGMVGGQL 157 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + ++N VT E+ + KT L A+ ++ IA + L+ + N+GI F Sbjct: 158 ADME-AENKHVTLEELSSIHARKTGELLIYAVTSAAKIAEADLEQTKRLRIFAENIGIGF 216 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN----FWKSTINDGK 261 Q+ DD+LD G+ +MGK G D K T P +L G KR N KS ++ Sbjct: 217 QISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLD-GAKRALNEHVTIAKSALSGHD 275 Query: 262 ISVENLKKA--FIIMREN 277 E L K I +REN Sbjct: 276 FDDEILLKIADLIALREN 293 >gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20] gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20] Length = 298 Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 120/238 (50%), Gaps = 15/238 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + +GGKRLRP+L+LA ML + + ACA+E IHT +L+HDD+ +D+ R Sbjct: 39 MRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFR 98 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLVACTLAEGELRQLS 149 RG+ V+G ++L GD LL+ AF +++E K+ + A + + Sbjct: 99 RGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMI 158 Query: 150 LSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + +D+ E + +H + KT L A + ++++ G Q L + N Sbjct: 159 AGQVIDLESEGKQVDNEILNRMH--RLKTGALIKAPVVSAAILCGADADDIQKLDEFAEN 216 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 LG+AFQ+ DD+LD G ++GK +G D N K T + ++ + + K ++ Sbjct: 217 LGLAFQIKDDILDVEGSSEKLGKKVGSDADNNKSTYVTVYGLEKSKEILSDVTKKAVD 274 >gi|121634131|ref|YP_974376.1| geranyltranstransferase [Neisseria meningitidis FAM18] gi|120865837|emb|CAM09569.1| geranyltranstransferase [Neisseria meningitidis FAM18] gi|325143100|gb|EGC65447.1| geranyltranstransferase [Neisseria meningitidis 961-5945] gi|325143170|gb|EGC65516.1| geranyltranstransferase [Neisseria meningitidis 961-5945] gi|325197545|gb|ADY93001.1| geranyltranstransferase [Neisseria meningitidis G2136] Length = 298 Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 121/233 (51%), Gaps = 16/233 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + E + AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G ++L GD L +QAF ++ A Sbjct: 80 IHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT---------EEDYLHVIKSKTAVLFSAALEVSSL 182 L++++ G R ++ + +D+ + + +H +K+ A++ +A L ++ Sbjct: 140 QLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMHSLKT-GALIRAAVLLGATA 198 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + ++ L +Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 199 CPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|15842975|ref|NP_338012.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|254233984|ref|ZP_04927309.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis C] gi|308370246|ref|ZP_07666898.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu002] gi|308371326|ref|ZP_07667135.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu003] gi|308372523|ref|ZP_07667397.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu004] gi|308373727|ref|ZP_07667640.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu005] gi|308374857|ref|ZP_07667880.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu006] gi|308376100|ref|ZP_07668191.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu007] gi|13883314|gb|AAK47826.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|124599513|gb|EAY58617.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis C] gi|308324901|gb|EFP13752.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu002] gi|308329132|gb|EFP17983.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu003] gi|308332967|gb|EFP21818.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu004] gi|308336584|gb|EFP25435.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu005] gi|308340457|gb|EFP29308.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu006] gi|308344324|gb|EFP33175.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu007] Length = 354 Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 4/178 (2%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETK 125 A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A ++ E Sbjct: 101 AVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLTDECV 160 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + A+ L + L G+ L +VT +DYL + KTA L + +L+A Sbjct: 161 AVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVAN 220 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A Sbjct: 221 ADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 278 >gi|73662542|ref|YP_301323.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495057|dbj|BAE18378.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 295 Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 136/256 (53%), Gaps = 19/256 (7%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 K +E LT E+VN L+ + I + + + ++Y + +GGKR+RP+L L T ML Sbjct: 4 KKMEHLT----EEVNQLLSETIPNSKLNTNLEESMRYSLEAGGKRIRPVLLLLTLEMLTD 59 Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 + A A+E IHT +L+HDD+ +D+ RRGK+ V+G ++L GD LL++A Sbjct: 60 QYKKGFSSALALEMIHTYSLIHDDLPPMDNDDYRRGKLTNHKVFGEWKAILAGDALLTKA 119 Query: 118 FCMVIETKSQEALEALSLVA-CTLAEGELRQLSLSKNLDVTEE--------DYLHVI-KS 167 F M++ S + + L+ + A G L + + LD+ E D L I + Sbjct: 120 FDMIVNDDSLNDVAKVKLIKRLSFASGHLGMVG-GQTLDMQSEGAETNIDLDTLEKIHNA 178 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KT L A+ + IA +N V AL+SY +LG+ FQ+ DD+LD G+ ++GK +G Sbjct: 179 KTGALLKFAVMAAVDIAEPENEVSNALESYSEHLGLMFQIKDDLLDIYGDEAKLGKAVGS 238 Query: 228 DFRNGKPTLPVILAFQ 243 D N K T +L Q Sbjct: 239 DIENDKSTYVSLLGQQ 254 >gi|15610519|ref|NP_217900.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis H37Rv] gi|148663246|ref|YP_001284769.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis H37Ra] gi|167966941|ref|ZP_02549218.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis H37Ra] gi|2661662|emb|CAA15768.1| POSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE) (POLYPRENYL DIPHOSPHATE SYNTHASE) [Mycobacterium tuberculosis H37Rv] gi|148507398|gb|ABQ75207.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis H37Ra] Length = 350 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 4/178 (2%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETK 125 A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A ++ E Sbjct: 97 AVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECV 156 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + A+ L + L G+ L +VT +DYL + KTA L + +L+A Sbjct: 157 AVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVAN 216 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A Sbjct: 217 ADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 274 >gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405] gi|125713574|gb|ABN52066.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405] Length = 295 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 120/239 (50%), Gaps = 15/239 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + +GGKRLRP+L+LA ML + + ACA+E IHT +L+HDD+ +D+ Sbjct: 35 AMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDF 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLVACTLAEGELRQL 148 RRG+ V+G ++L GD LL+ AF +++E K+ + A + + Sbjct: 95 RRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGM 154 Query: 149 SLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + +D+ E + +H + KT L A + ++++ G Q L + Sbjct: 155 IAGQVIDLESEGKQVDNEILNRMH--RLKTGALIKAPVVSAAILCGADADDIQKLDEFAE 212 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 NLG+AFQ+ DD+LD G ++GK +G D N K T + ++ + + K ++ Sbjct: 213 NLGLAFQIKDDILDVEGSSEKLGKKVGSDADNNKSTYVTVYGLEKSKEILSDVTKKAVD 271 >gi|251796322|ref|YP_003011053.1| polyprenyl synthetase [Paenibacillus sp. JDR-2] gi|247543948|gb|ACT00967.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2] Length = 302 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 124/238 (52%), Gaps = 19/238 (7%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGD--NHVL-LACAIEFIHTATLLHDDV--VDDSAL 90 Y + +GGKRLRP L LA A + + H L +ACAIE+IHT +L+HDD+ +D+ Sbjct: 40 YSLQAGGKRLRPALVLAAAEAVHGQAAAARHALPVACAIEYIHTYSLVHDDLPAMDNDDY 99 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---------SQEALEALSLVACT-- 139 RRGK+ V+G ++L GD LL+ AF ++ + + + +E L+++A Sbjct: 100 RRGKLTNHKVFGEAMAILAGDALLTHAFHLIPKVARLGGISAEVALDIVEDLAMLAGARG 159 Query: 140 LAEGELRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G+ + + + EE +Y+H+ K+ ++FS + I G +AL+ YG Sbjct: 160 MVGGQAADMQGEQGITSIEELEYIHLHKTSDLIVFS--VTAGGRIGGASAEQLEALRHYG 217 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 N+G+AFQ+ DD+LD G+ ++GK D K T P ++ + K + Sbjct: 218 RNIGLAFQIQDDILDLIGDEKKLGKKTNSDVEQQKVTYPYLIGIDESKAQVKRLTREA 275 >gi|78063059|ref|YP_372967.1| farnesyl-diphosphate synthase [Burkholderia sp. 383] gi|77970944|gb|ABB12323.1| farnesyl-diphosphate synthase [Burkholderia sp. 383] Length = 294 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 118/228 (51%), Gaps = 14/228 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ + Sbjct: 30 EKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCM 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------A 137 DD ALRRGK + + T++LVGD L SQAF + + + ++ +LV + Sbjct: 90 DDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAAALSPVQQAALVRELALASGS 149 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--ALK 195 +A G+ L+ S L +T E + + KT L AA+ + +L AG S AL Sbjct: 150 IGMAGGQAIDLA-SVGLKLTREQLETMHRMKTGALLRAAVRMGAL-AGETPSAETMAALD 207 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 Y +G+AFQ+VDD+LD + +GK G+D N KPT IL + Sbjct: 208 VYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLE 255 >gi|257464799|ref|ZP_05629170.1| geranyltranstransferase [Actinobacillus minor 202] gi|257450459|gb|EEV24502.1| geranyltranstransferase [Actinobacillus minor 202] Length = 299 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 86/291 (29%), Positives = 147/291 (50%), Gaps = 33/291 (11%) Query: 13 EKVNFLI---LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++VN I LK+ + + D + Y + GGKR+RP L AT ML + A Sbjct: 16 QRVNQFIEQELKQYSAYHSPLIDAMAYAVLLGGKRVRPFLIYATGRMLGVSLEALDHSAA 75 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---- 123 A+E IH +L+HDD+ +DD LRRGK + + T++L GD L + AF ++ + Sbjct: 76 AMESIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILAGDSLQTFAFELIAKDPFL 135 Query: 124 TKSQEALEALSLVACTLAEG-----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 T Q+ + SL A G L +S +K + ++E + +H ++KT L Sbjct: 136 TDLQKVKQIQSLAQAAGARGMCLGQSLDLISENKAISLSELELIH--RNKTGALI----- 188 Query: 179 VSSLIAGVQNS-------VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 V+S++ G S ++ AL+ Y +G+AFQ+ DD+LD G+ +++GK G D Sbjct: 189 VASVLMGFNLSDYARDEKIKNALECYAKAIGLAFQVQDDILDVIGDTDKIGKTAGSDESL 248 Query: 232 GKPTLPVILAFQRGTKREKNFWKST---INDGKISVENLK--KAFIIMREN 277 K T P +L + ++ ++ ++++ +++ LK FII RE+ Sbjct: 249 NKSTYPKLLGLEGAMEKAQSLYQTSLEALDELPFDTRALKALAHFIIQRES 299 >gi|317008891|gb|ADU79471.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori India7] Length = 307 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/265 (29%), Positives = 141/265 (53%), Gaps = 18/265 (6%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L+ + D +L L +E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLDEKTDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K EA+ + LS L+ GE+ + + ++ + Sbjct: 92 INALFGNFNAVMLGDVFYSKAFFEL--SKMGEAIAQILSNAVLRLSRGEIEDVFVGESFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ N + +G+N G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFMEASLKSMAILL---NKDTKIYADFGLNFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAFIIM 274 + +GK DF+ GK TLP +L +++ + E+ S D +E K+ F Sbjct: 207 QDAKTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQGLLISYFKQDSHEIIEWTKEKF--- 263 Query: 275 RENRALVDTEYRAYSYGQKAKDSLR 299 ++ + +T A Y +KA ++++ Sbjct: 264 KQYGIIEETLKTAQVYSKKALEAIK 288 >gi|15644868|ref|NP_207038.1| octaprenyl-diphosphate synthase (ispB) [Helicobacter pylori 26695] gi|2313331|gb|AAD07307.1| octaprenyl-diphosphate synthase (ispB) [Helicobacter pylori 26695] Length = 307 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 110/184 (59%), Gaps = 7/184 (3%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D +A+RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKAAMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E++ ++LS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 121 ESIAKSLSNAVLRLSRGEIEDVFVGGSFNSDKQKYWRILEDKTAHFIEASLKSMAILL-- 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N + +G+N G+AFQ++DD+LD + +GK DF+ GK TLP +L +++ Sbjct: 179 -NKDAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTTLPYLLLYEKLN 237 Query: 247 KREK 250 +R++ Sbjct: 238 QRDQ 241 >gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana] Length = 373 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 118/230 (51%), Gaps = 11/230 (4%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV- 84 D I + ++Y + +GGKR+RPML +A ++ + AC++E IHT +L+HDD+ Sbjct: 105 DPRKIHEAMRYSLLAGGKRVRPMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLP 164 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEAL--------S 134 +D+ LRRGK V+G +VL GD LL+ +F + + T+ L S Sbjct: 165 CMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARS 224 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + A L G++ + DV E + KTA L A+ + +++ G N + L Sbjct: 225 IGAEGLVAGQVVDICSEGLSDVGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKL 284 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +++ +G+ FQ+VDD+LD E+GK G+D K T P ++ ++ Sbjct: 285 RNFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLMGVEK 334 >gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata] Length = 365 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/242 (30%), Positives = 125/242 (51%), Gaps = 35/242 (14%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV- 84 + E I + ++Y + +GGKR+RP+L LA ++ + ACA+E IHT +L+HDD+ Sbjct: 97 EPEKIHEAMRYSLLAGGKRVRPVLCLAACELVGGHESMAMPAACAVEMIHTMSLIHDDLP 156 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE- 142 +D+ LRRGK V+G + +VL GD LL+ AF + A+S V + A Sbjct: 157 CMDNDDLRRGKPTNHKVFGEEVAVLAGDALLAFAFEHI----------AVSTVGVSTARI 206 Query: 143 ----GELRQLSLSKNL------DVTEE----------DYLHVIKSKTAVLFSAALEVSSL 182 GEL + S+ L D+ E +++HV KTA L A++ + ++ Sbjct: 207 VRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQLEFIHV--HKTAALLEASVVLGAI 264 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + G + + L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++ Sbjct: 265 LGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLMGI 324 Query: 243 QR 244 ++ Sbjct: 325 EK 326 >gi|331697463|ref|YP_004333702.1| Dimethylallyltranstransferase [Pseudonocardia dioxanivorans CB1190] gi|326952152|gb|AEA25849.1| Dimethylallyltranstransferase [Pseudonocardia dioxanivorans CB1190] Length = 356 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/243 (32%), Positives = 125/243 (51%), Gaps = 7/243 (2%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGK +RP L L +A + V A A+E +H +LLHDD++D RR + + Sbjct: 70 GGGKAVRPALALLSAAAAGAGVEVGVPGAVAVELVHNFSLLHDDLMDGDTERRHRTTVWV 129 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLSLSKNLDV 156 WG +++L GD +L+ A +++E S A A L+A T E G+ L+ DV Sbjct: 130 QWGASSAILCGDAMLALAQEVLLEAPSPHAAPAARLLAVTTRELIRGQAEDLAFESRDDV 189 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 ++ L + KT L +A+ + +++AG + +AL +YG +G+AFQLVDD+L G Sbjct: 190 GVDECLSMAAGKTGSLLAASASIGAVLAGAPAAQTEALHTYGHEVGMAFQLVDDLLGIWG 249 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGT--KREKNFWKSTINDGKISVENLKKAFIIM 274 + GK + D R+ K +LPV A + G RE W + DG + + L A ++ Sbjct: 250 DPGVTGKPVLSDLRSRKKSLPVTYAIRNGGDIGRELGDWLAA--DGDPTDDELHAAARLV 307 Query: 275 REN 277 + Sbjct: 308 EQG 310 >gi|284166593|ref|YP_003404872.1| polyprenyl synthetase [Haloterrigena turkmenica DSM 5511] gi|284016248|gb|ADB62199.1| Polyprenyl synthetase [Haloterrigena turkmenica DSM 5511] Length = 280 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 10/230 (4%) Query: 12 MEKVNFLILKRICSDVE-MIPDV----VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 +E+ LI +R+ V+ + PD V++ +GGKR+RPM+T+ + ++ V Sbjct: 4 LERRRALIEERLVEVVDDLEPDALRAEVEHTALAGGKRVRPMVTVLACETVGGTAEDAVD 63 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 IE +H A+L+ DD++D S LRRG +A +G +++ D LL +AF + + Sbjct: 64 FGVGIELVHAASLVVDDIIDRSELRRGTTSAWAEFGYGPAIVSSDGLLGEAFALF--SSD 121 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +A ++ L GE +LS TE +Y+ + + KT LF AA E+ ++ AG Sbjct: 122 PDATRVVAEAMVELGIGEATELSAEPE---TEAEYMTLARRKTGALFRAAAELGAIAAGS 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +AL Y +G+AFQ+ DDVLD + +E+GK G D +P++ Sbjct: 179 DAVTVEALGEYAERVGVAFQIRDDVLDAIADPDELGKPTGHDAALERPSV 228 >gi|90962003|ref|YP_535919.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / heptaprenyl diphosphate synthase component II [Lactobacillus salivarius UCC118] gi|90821197|gb|ABD99836.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase / Farnesyltransferase / Heptaprenyl diphosphate synthase component II [Lactobacillus salivarius UCC118] Length = 328 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 119/237 (50%), Gaps = 7/237 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALML--EYRGDNHVL 66 KD+EKV + +I D + + + +GGK LRP L T L + R D+ L Sbjct: 14 KDIEKVKHNLQDKISVDYPDLQTALSKMASNGGKFLRPAFFLLFTKLTADSQNRVDDKKL 73 Query: 67 L--ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + A ++E +H +TL+HDD++DDS RRG+V+ + +G +V GD+L + F ++ + Sbjct: 74 IDIATSLEVLHMSTLIHDDIIDDSPKRRGEVSVQSQFGKDIAVYAGDYLFTVFFDLITDN 133 Query: 125 KSQEALEAL-SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + S + GEL Q+ N T +YL + KTA LF A + Sbjct: 134 VLDTPFFKINSRTMKKILLGELNQMKHRYNTQQTFLNYLRNVNGKTAYLFRLASAEGAYF 193 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 G + G N+GI+FQ++DD+LDY + + + K ED G +LP++L Sbjct: 194 GGASSQTVSLATRIGQNIGISFQILDDILDY-SDASRLNKPTLEDLATGVYSLPLLL 249 >gi|296533686|ref|ZP_06896240.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957] gi|296265985|gb|EFH12056.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957] Length = 300 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 18/227 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKR+R L L A + + +A AIE +H +L+HDD+ +D+ L Sbjct: 39 AMRYSVLGGGKRMRGFLVLEGAAQFGVSRVSALRVAAAIEMLHAYSLVHDDLPAMDNDEL 98 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVACTLAEGELRQL 148 RRGK +G T++L GD L + AF ++ +T S A+ A + LA G + + Sbjct: 99 RRGKPTTHRAYGEATAILAGDALQAHAFAVLAGEDTHSDPAVRAELCLRLALAAGS-KGM 157 Query: 149 SLSKNLDVTEEDY-----------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + LD+ E+ L ++K+ + FSA E +++ R AL +Y Sbjct: 158 CGGQMLDMLAEEATEALSESAIGRLQLLKTGKLIEFSA--EAGAVLGKAPGPQRHALCAY 215 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G LG AFQ+ DD+LD E GK G+D GK TL +L +R Sbjct: 216 GRELGAAFQIADDILDATASAEETGKATGKDAGAGKATLVGLLGLER 262 >gi|261378523|ref|ZP_05983096.1| geranyltranstransferase [Neisseria cinerea ATCC 14685] gi|269145073|gb|EEZ71491.1| geranyltranstransferase [Neisseria cinerea ATCC 14685] Length = 298 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/233 (32%), Positives = 120/233 (51%), Gaps = 16/233 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + E + AIE Sbjct: 20 LLLERFLPSEGEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++LVGD L +QAF ++ S A Sbjct: 80 IHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVGDALQTQAFDVLARPSSLPASR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSL 182 L++++ G ++ + +D+ T+ + +H +K+ + + L S Sbjct: 140 QLAMLSVLAKAGGSSGMAGGQAIDLANVGKQMAQTDLEQMHSLKTGALIRAAVLLGAMSC 199 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +NS+ L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLSENSL-AVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|34498146|ref|NP_902361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472] gi|34104001|gb|AAQ60361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472] Length = 298 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 17/235 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKR+RP+L A ++ + DN + A+E +H +L+HDD+ +D+ Sbjct: 37 EAMRYATLEGGKRVRPLLVFAAGELVGAQADNLARIGAALEMVHAYSLVHDDMPCMDNDV 96 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQ-EALEALSLVACTLAE 142 LRRGK + + + T++LVGD L ++AF ++ I SQ E + AL+ A Sbjct: 97 LRRGKPTCHIAYDDATALLVGDALQTRAFELISQPMPDIAPASQLEMVRALAHAAGHAGM 156 Query: 143 GELRQLSLSK---NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV--RQALKSY 197 + + L+ L + E +++H++K T L AA+ S+ AG + S ++AL ++ Sbjct: 157 AGGQAIDLASVGLPLTLPELEFMHMLK--TGALIRAAVLAGSM-AGRELSAAEKEALDAF 213 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +G+AFQ+VDD+LD + +GK G+D N KPT +L + K+ Sbjct: 214 AKRIGLAFQVVDDILDCEADTATLGKTAGKDAANDKPTYVSLLGLAEAKRMAKDL 268 >gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis] Length = 351 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 120/233 (51%), Gaps = 25/233 (10%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RPML LA ++ + AC+IE IHT +L+HDD+ +D+ Sbjct: 87 IHESMRYSLLAGGKRVRPMLCLAACELVGGHPSTAMPAACSIEMIHTMSLMHDDLPCMDN 146 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA------LSLVACTLA 141 LRRG +V+G +VL GD LL+ +F + T ++ L L C + Sbjct: 147 DHLRRGHPTNHIVFGEDVAVLAGDALLAYSF-EYLATATEGVLPERIVRVIAELAKCIRS 205 Query: 142 EGELRQLSLSKNLDVTEE----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 EG L + +D+ E +Y+H+ KTA L ++ + +++ G + Sbjct: 206 EG----LLAGQVVDICSEGVSEIGLEHLEYIHL--HKTAALLEGSVVLGAILGGGNDEEV 259 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++ ++ Sbjct: 260 ERLRKFARCIGLLFQVVDDILDVTKTSVELGKTAGKDLVADKTTYPKLIGIEK 312 >gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 299 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/240 (31%), Positives = 117/240 (48%), Gaps = 16/240 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +KY GGKR+RP LT T ML +N A AIE IH +L+HDD+ +DD L Sbjct: 38 AMKYGALLGGKRVRPFLTYVTGNMLGVNEENLDTPAAAIECIHAYSLIHDDLPAMDDDEL 97 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKSQEALEALSLVACTLAEGE 144 RRG+ + + T+VL GD L + AF + I+ +SQ L + A G Sbjct: 98 RRGQPTCHIAFDEATAVLAGDALQTLAFEILAEGTLSIDGESQRIKMIKELAQASGAAGM 157 Query: 145 LRQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYG 198 +L K+L +T+ + +H K KT L A+ + +L AG + + L +Y Sbjct: 158 CMGQALDLDGEGKHLGLTQLEQIH--KHKTGALIRCAVRLGALAAGEKGLEILPQLNTYA 215 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L + ++ + ++ + Sbjct: 216 EAIGLAFQVQDDILDVISDTETLGKPQGSDIALDKSTYPALLGLEGAQQKAQQLYQEAVQ 275 >gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065] Length = 284 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 121/226 (53%), Gaps = 13/226 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L L T + + + +A AIE IHT +L+HDD+ +D+ Sbjct: 23 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 82 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACT----- 139 LRRGK ++G ++L GD LL++A ++ E ++A++A +A Sbjct: 83 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKAVKACYTIAKAAGVDG 142 Query: 140 LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G++ LS K++ + E Y+H K KT L +++ +++ + + L YG Sbjct: 143 MIGGQVVDILSEDKSIPLDELYYMH--KKKTGALIKSSILAGAILGSATYTDIELLGEYG 200 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NLG+AFQ+ DD+LD G+ +GK D N K T + ++ Sbjct: 201 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEK 246 >gi|31794563|ref|NP_857056.1| polyprenyl synthetase IdsB [Mycobacterium bovis AF2122/97] gi|121639307|ref|YP_979531.1| putative polyprenyl synthetase idsB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148824590|ref|YP_001289344.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis F11] gi|215405406|ref|ZP_03417587.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 02_1987] gi|215428885|ref|ZP_03426804.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92] gi|215432351|ref|ZP_03430270.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054] gi|219559456|ref|ZP_03538532.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17] gi|224991804|ref|YP_002646493.1| putative polyprenyl synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800429|ref|YP_003033430.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 1435] gi|254365996|ref|ZP_04982041.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis str. Haarlem] gi|260188437|ref|ZP_05765911.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A] gi|260202541|ref|ZP_05770032.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46] gi|260206746|ref|ZP_05774237.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85] gi|289444961|ref|ZP_06434705.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46] gi|289449079|ref|ZP_06438823.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A] gi|289555659|ref|ZP_06444869.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 605] gi|289571618|ref|ZP_06451845.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17] gi|289576114|ref|ZP_06456341.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85] gi|289747205|ref|ZP_06506583.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis 02_1987] gi|289752097|ref|ZP_06511475.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92] gi|289755512|ref|ZP_06514890.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054] gi|297636043|ref|ZP_06953823.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 4207] gi|297733042|ref|ZP_06962160.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN R506] gi|306805203|ref|ZP_07441871.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu008] gi|306969495|ref|ZP_07482156.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu009] gi|313660374|ref|ZP_07817254.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN V2475] gi|31620159|emb|CAD95588.1| POSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE) (POLYPRENYL DIPHOSPHATE SYNTHASE) [Mycobacterium bovis AF2122/97] gi|121494955|emb|CAL73441.1| Possible polyprenyl synthetase idsB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151509|gb|EBA43554.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis str. Haarlem] gi|148723117|gb|ABR07742.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis F11] gi|224774919|dbj|BAH27725.1| putative polyprenyl synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321932|gb|ACT26535.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 1435] gi|289417880|gb|EFD15120.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46] gi|289422037|gb|EFD19238.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A] gi|289440291|gb|EFD22784.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 605] gi|289540545|gb|EFD45123.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85] gi|289545372|gb|EFD49020.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17] gi|289687733|gb|EFD55221.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis 02_1987] gi|289692684|gb|EFD60113.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92] gi|289696099|gb|EFD63528.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054] gi|308348256|gb|EFP37107.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu008] gi|308352981|gb|EFP41832.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu009] gi|328460161|gb|AEB05584.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 4207] Length = 350 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 4/178 (2%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETK 125 A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A ++ E Sbjct: 97 AVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLTDECV 156 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + A+ L + L G+ L +VT +DYL + KTA L + +L+A Sbjct: 157 AVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVAN 216 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A Sbjct: 217 ADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 274 >gi|323717965|gb|EGB27153.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CDC1551A] Length = 257 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 4/180 (2%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---- 122 ++ A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A ++ Sbjct: 1 MSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLTD 60 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E + A+ L + L G+ L +VT +DYL + KTA L + +L Sbjct: 61 ECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGAL 120 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +A ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A Sbjct: 121 VANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAAL 180 >gi|309775474|ref|ZP_07670476.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53] gi|308916770|gb|EFP62508.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53] Length = 282 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 15/260 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y + +GGKR+RP L LA LA AIE IHT +L+HDD+ +D+ Sbjct: 24 DAMQYSLMAGGKRVRPKLLLAVLNAYAQEEAIGYPLAAAIEMIHTYSLIHDDLPAMDNDT 83 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLV-----ACTLAE 142 LRRG + +G ++L GD LL+ AF ++T + E +E L+ A + Sbjct: 84 LRRGMATCHVKYGEDVAILAGDGLLTYAFAQAMKTACPADELVEICRLLSDYSGAGGMIL 143 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+++ L N + + + KT L + L +L+AG + + + G ++G Sbjct: 144 GQIKDLEGEANPHIDLQSLQDIHFYKTGKLLTLPLLCGALLAGHKADL-PVWEMIGADIG 202 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI---ND 259 ++FQ+ DD+LD V E+GKNI D N K T + ++ + +++ I + Sbjct: 203 LSFQIQDDILDVTSTVEELGKNINSDAENEKSTYVTLQGIEKAKQDADFYYRRAITQLDS 262 Query: 260 GKISVENLKKAF--IIMREN 277 K+ E +KK F ++ R+N Sbjct: 263 LKLDTEPVKKLFDQLMKRKN 282 >gi|184155736|ref|YP_001844076.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956] gi|227515672|ref|ZP_03945721.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931] gi|260663547|ref|ZP_05864437.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN] gi|183227080|dbj|BAG27596.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956] gi|227085975|gb|EEI21287.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931] gi|260552088|gb|EEX25141.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN] Length = 291 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 120/235 (51%), Gaps = 14/235 (5%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 D ++ + Y + +GGKRLRP LT+A A L+ + D+ V ACA+E IHT +L+HDD+ Sbjct: 25 DQPLLEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRAACALELIHTYSLIHDDL 84 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-------ALSL 135 +D+ LRRGK V+G + L GD LL+ AF V + + + + A + Sbjct: 85 PAMDNDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSDNQLKAPVRLRLVQELAKAA 144 Query: 136 VACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G+ +S + + L + + LH + KT L A+ LIA + +V L Sbjct: 145 GPAGMVAGQATDVSATGQELSLAQLKKLH--RQKTGALLRYAVLAGGLIAEQETAVLDCL 202 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++G G+AFQ+ DD+LD EMGK +D K T P +L G K E Sbjct: 203 TTFGEAYGLAFQIYDDILDVTATTAEMGKATHKDQAEQKNTYPGLLGLA-GAKGE 256 >gi|71403571|ref|XP_804573.1| farnesyl synthetase [Trypanosoma cruzi strain CL Brener] gi|14582479|gb|AAK69519.1|AF282771_1 solanesyl diphosphate synthase [Trypanosoma cruzi] gi|70867614|gb|EAN82722.1| farnesyl synthetase, putative [Trypanosoma cruzi] gi|258676433|gb|ACV87213.1| solanesyl diphosphate synthase [Trypanosoma cruzi] gi|258676435|gb|ACV87214.1| solanesyl diphosphate synthase [Trypanosoma cruzi] Length = 363 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/250 (31%), Positives = 122/250 (48%), Gaps = 26/250 (10%) Query: 33 VVKYLIFSGGKRLRPMLT--LATALMLEYRGDN-------------------HVLLACAI 71 + KY+ GK LRP L +A AL+ + + + L Sbjct: 61 IAKYVFSVSGKMLRPTLVAMMAHALLPPHVSEQIRAESIGSIDDISSGAIRPFLRLGEIT 120 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +HTATL+HDDV+D+S RRG+ ++ + +VL GDFLL++A + + Sbjct: 121 ELLHTATLVHDDVMDNSNTRRGQPTVHCLYDTKRAVLAGDFLLARASIWIAALGHSRVVL 180 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV- 190 +S LA GE+ Q+ ++ E Y KTA L + +L ++++AG+ N+ Sbjct: 181 LMSTALEDLAAGEMMQMDGCFDI----ESYEQKSYCKTASLIANSLASTAVLAGLPNTAY 236 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A +G +LGIAFQ+VDD LD G+ +GK D G TLPV+LA + T+ + Sbjct: 237 EEAAAKFGKHLGIAFQIVDDCLDITGDDKNLGKPKMADMAEGIATLPVLLAAREETRVYE 296 Query: 251 NFWKSTINDG 260 + N G Sbjct: 297 AVRRRFKNPG 306 >gi|325203376|gb|ADY98829.1| geranyltranstransferase [Neisseria meningitidis M01-240355] Length = 298 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 14/232 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + E + AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVGQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G ++L GD L +QAF ++ A Sbjct: 80 IHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLARPSGLPASR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G R ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSC 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|240145667|ref|ZP_04744268.1| geranyltranstransferase [Roseburia intestinalis L1-82] gi|257202256|gb|EEV00541.1| geranyltranstransferase [Roseburia intestinalis L1-82] Length = 296 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 16/218 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV--VDD 87 + + Y +GGKRLRP+L L T + + G + V+ AIE IHT +L+HDD+ +D+ Sbjct: 34 EAMNYSFLAGGKRLRPILMLETYRL--FGGKSKVIEPFMAAIEMIHTYSLVHDDLPAMDN 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACT--- 139 RRGK +V+G ++L GD LL+ AF + IE ++ +A+ +++ Sbjct: 92 DEYRRGKKTTHVVYGEAMAILAGDALLTYAFETAAKALDIEPQNPGIGKAIRILSAKAGI 151 Query: 140 --LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + G+ + D+T+E + + KT+ L A++ + +++AG S ++ +++ Sbjct: 152 YGMVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKIVEAV 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +G+AFQ+ DD+LD + +GK IG D +N K T Sbjct: 212 ASKVGLAFQIQDDILDVTSTMEVLGKPIGSDEKNHKST 249 >gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3] gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3] Length = 295 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 87/287 (30%), Positives = 146/287 (50%), Gaps = 31/287 (10%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIP-----DVVKYLIFSGGKRLRPMLTLATAL 55 MK LE + + VN L RI +D +P +++ + +GGKRLRP+L +A A Sbjct: 1 MKNLETYLARRQKAVNE-ALDRILADC--VPGGRLFSAMRHSLKAGGKRLRPILCMAAAE 57 Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFL 113 + ++ + CAIE IHT +L+HDD+ +D+ LRRG+ A + T++ GD L Sbjct: 58 AVGGTWEDALFPGCAIELIHTYSLVHDDLPAIDNDPLRRGQPACHAAFDEATAIFAGDAL 117 Query: 114 LSQAFCMV-----IETKSQEALEALSLVA-----CTLAEGELRQ-LSLSKNLDVTEEDYL 162 + AF ++ I + + L + L++ + EG++R L+ NL + + L Sbjct: 118 HTLAFEVLSSDRYIFFQGKRRLALIHLISRATGNHGMIEGQMRDILAQGGNLGLDQLKEL 177 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK--SYGMNLGIAFQLVDDVLDYRGEVNE 220 H + KT L +A++ +L + +VRQ K Y N+G+AFQ+ DD+L+ G+ Sbjct: 178 H--RLKTGALITASVHAGALTG--KATVRQTGKLIEYAENIGLAFQVADDLLNVEGDPLL 233 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 GK+IG D GK T P ++ G + F + ++E+L Sbjct: 234 TGKSIGTDHVLGKATFPNLM----GIDASRKFAAQLVEKSLQAIESL 276 >gi|290955843|ref|YP_003487025.1| polyprenyl synthatase [Streptomyces scabiei 87.22] gi|260645369|emb|CBG68455.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22] Length = 350 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 14/292 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L + +A + + + A A+E +H +LLHDD++D RR + V Sbjct: 59 GGKAVRPALAVMSAEVTGAAPEAGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 118 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDVT 157 G ++LVGD L+ A +++E + EA A V L +G+ + +S VT Sbjct: 119 HGPAQAILVGDALMVLANEILLELGTVEAARATRRVTTATRALIDGQAQDISYEHRERVT 178 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 179 VEECLEMEGNKTGALLACACSIGAVLGGADDHTADTLEKYGYHLGLAFQAVDDLLGIWGD 238 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS-VENL-------KK 269 GK D R K +LPV+ A G + + D K S EN + Sbjct: 239 PVSTGKQTWSDLRQRKKSLPVVAALAAGGPASERLGEILAADAKASDFENFSEEEFAARA 298 Query: 270 AFIIMRENRA-LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A I R V R ++ +A DS+R +P+ + + DF + R Sbjct: 299 ALIEQAGGREWAVQEARRQHTIAIEALDSIR-MPERV-RDEFAALADFVVVR 348 >gi|323529243|ref|YP_004231395.1| polyprenyl synthetase [Burkholderia sp. CCGE1001] gi|323386245|gb|ADX58335.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001] Length = 293 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 120/222 (54%), Gaps = 13/222 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + V+Y + GGKR+RP+L A + R + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAVRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIETKSQEALE---ALSLVACTLAE 142 LRRGK + + T++LVGD L SQAF V+ Q AL AL+ + + Sbjct: 94 LRRGKPTVHVKYDEATALLVGDALQSQAFVALTSDVLAPAQQAALVRELALASGSIGMCG 153 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI--AGVQNSVRQALKSYGMN 200 G+ L+ S +T E + + KT L AA+ + +L A N++R +L +Y Sbjct: 154 GQAIDLA-SVGHTLTREQLETMHRMKTGALLRAAVRMGALAGEAPDANAMR-SLDAYSAA 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D ++GKPT I+ Sbjct: 212 VGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGL 253 >gi|307636933|gb|ADN79383.1| octaprenyl-diphosphate synthase [Helicobacter pylori 908] gi|325995523|gb|ADZ50928.1| Octaprenyl-diphosphate synthase [Helicobacter pylori 2018] gi|325997121|gb|ADZ49329.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori 2017] Length = 307 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/265 (29%), Positives = 142/265 (53%), Gaps = 18/265 (6%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L+ + D +L L +E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLDEKTDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K E++ +ALS L+ GE+ + + + + Sbjct: 92 INALFGNFNAVMLGDVFYSKAFFEL--SKMGESIAQALSNAVLRLSRGEIEDVFVGECFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ N + +G++ G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFIEASLKSMAILL---NKDAKMYADFGLHFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAFIIM 274 + N +GK DF+ GK TLP +L +++ E+ S D +E K+ F Sbjct: 207 QDANTLGKPNFSDFKEGKTTLPYLLLYEKLNPHEQGLLISYFKQDSHEIIEWTKEKF--- 263 Query: 275 RENRALVDTEYRAYSYGQKAKDSLR 299 +++ + +T A Y +KA ++++ Sbjct: 264 KQHGIIEETLKIAQVYSKKALEAIK 288 >gi|145500940|ref|XP_001436453.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124403592|emb|CAK69056.1| unnamed protein product [Paramecium tetraurelia] Length = 366 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/300 (25%), Positives = 146/300 (48%), Gaps = 15/300 (5%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV----LLACAI 71 N++ + I D+E + + GK +RPML L A +E + H + A I Sbjct: 55 NYIKQEIIQGDIESLNKASTHYFSKEGKLIRPMLNLLYANHIE-KNSQHTEQQRIWAAVI 113 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H A+L+HDD++D S RRG ++ ++G + ++L+ +A + E + Sbjct: 114 EILHVASLVHDDILDASDTRRGIPSSHTIFGKHRATFSANYLIGRAGRKISELDDIRMFQ 173 Query: 132 ALSLVACTLAEGELRQLSLSK---NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 S + L GE Q K N ++T ++Y+ KTA L + +L+ + +++ Sbjct: 174 IYSQIMDNLTNGEYLQAMKQKSFHNFEITLQNYMIKTYYKTAALIANSLQGVCQLTNIKD 233 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + + + G++LG+AFQ++DDVLDY ++GK D ++G T PV+ K+ Sbjct: 234 EICEKSFNIGLHLGVAFQIIDDVLDYTSNSEQLGKASLNDLKSGVLTGPVLFELFNQQKK 293 Query: 249 EKNFWK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA---KDSLRCLPD 303 + +K +++ G+ + + ++ E + ++Y AY + Q+A S+ PD Sbjct: 294 QSPEYKLMNSVLLGESNQYDTVNQIVLAGE--GIEQSKYLAYQHTQEALKILQSINSQPD 351 >gi|71383196|ref|XP_802138.1| farnesyl synthetase [Trypanosoma cruzi strain CL Brener] gi|70846534|gb|EAN80692.1| farnesyl synthetase, putative [Trypanosoma cruzi] Length = 292 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 119/237 (50%), Gaps = 26/237 (10%) Query: 33 VVKYLIFSGGKRLRPMLT--LATALMLEYRG------------DNH-------VLLACAI 71 + KY+ GK LRP L +A AL+ + DN + L Sbjct: 2 IAKYVFSVSGKMLRPTLVAMMAHALLPPHVSEQIRAESIGSIDDNSSGAIRPFLRLGEIT 61 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +HTATL+HDDV+D+S RRG+ ++ + +VL GDFLL++A + + Sbjct: 62 ELLHTATLVHDDVMDNSNTRRGQPTVHCLYDAKRAVLAGDFLLARASIWIAALGHSRVVL 121 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV- 190 +S LA GE+ Q+ ++ E Y KTA L + +L ++++AG+ N+ Sbjct: 122 LMSTALEDLAAGEMMQMDGCFDI----ESYEQKSYCKTASLIANSLASTAVLAGLPNTAY 177 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +A +G +LGIAFQ+VDD LD G+ +GK D G TLPV+LA + T+ Sbjct: 178 EEAAAKFGKHLGIAFQIVDDCLDITGDDKNLGKPKMADMAEGIATLPVLLAAREETR 234 >gi|241760634|ref|ZP_04758726.1| geranyltranstransferase [Neisseria flavescens SK114] gi|241318815|gb|EER55341.1| geranyltranstransferase [Neisseria flavescens SK114] Length = 298 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 124/242 (51%), Gaps = 18/242 (7%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L +P + ++Y+ GGKRLRP+L LA + + E + AIE Sbjct: 20 LLLAHFLPSESQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 +H +L+HDD+ +D+ +LRRGK + + T++LVGD L +QAF ++ A Sbjct: 80 VHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRPTGLSAER 139 Query: 132 ALSLVAC--------TLAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 L++++ +A G+ L+ + K ++ E + +H +K T L AA+ + +L Sbjct: 140 QLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLK--TGALIRAAVALGAL 197 Query: 183 -IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + Q L Y LG+AFQ++DDVLD + +GK G+D N KPT ++ Sbjct: 198 SCPDLTPAQIQTLDHYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMG 257 Query: 242 FQ 243 Q Sbjct: 258 LQ 259 >gi|299783413|gb|ADJ41411.1| Geranyltranstransferase [Lactobacillus fermentum CECT 5716] Length = 311 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 120/235 (51%), Gaps = 14/235 (5%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 D ++ + Y + +GGKRLRP LT+A A L+ + D+ V ACA+E IHT +L+HDD+ Sbjct: 25 DQPLLEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRAACALELIHTYSLIHDDL 84 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-------ALSL 135 +D+ LRRGK V+G + L GD LL+ AF V + + + + A + Sbjct: 85 PAMDNDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSDNQLKAPVRLRLVQELAKAA 144 Query: 136 VACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G+ +S + + L + + LH + KT L A+ LIA + +V L Sbjct: 145 GPAGMVAGQATDVSATGQELSLAQLKKLH--RQKTGALLRYAVLAGGLIAEQETAVLDCL 202 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++G G+AFQ+ DD+LD EMGK +D K T P +L G K E Sbjct: 203 TTFGEAYGLAFQIYDDILDVTATTAEMGKATHKDQAEQKNTYPGLLGLA-GAKGE 256 >gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273] gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272] gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272] gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273] Length = 297 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 126/259 (48%), Gaps = 23/259 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 30 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDD 87 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-------LS 134 + LRRGK V+G +VL GD LL+ AF VI T Q+ + A L Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAF-QVIMTYEQKEISAEKKVRLVLE 146 Query: 135 LVACTLAEGELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L EG + + K L + E +Y+H K KT L A+ ++++ Sbjct: 147 LAKAAGPEGMVAGQVADMEAEGKRLTINELEYIH--KHKTGKLLEFAVLAGAILSDATEE 204 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R Sbjct: 205 QEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRA---- 260 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + TI K S+ +L+ Sbjct: 261 KSILEETIAKAKDSISSLQ 279 >gi|218755158|ref|ZP_03533954.1| polyprenyl synthetase [Mycobacterium tuberculosis GM 1503] gi|289763564|ref|ZP_06522942.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis GM 1503] gi|289711070|gb|EFD75086.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis GM 1503] Length = 350 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 4/178 (2%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETK 125 A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A ++ E Sbjct: 97 AVELVHNFTLLHDDVMDGDATRRGRSTVWSVWGVGGAILLGDALHATAVRILTGLTDECV 156 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + A+ L + L G+ L +VT +DYL + KTA L + +L+A Sbjct: 157 AVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVAN 216 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A Sbjct: 217 ADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 274 >gi|82540178|ref|XP_724427.1| polyprenyl synthetase [Plasmodium yoelii yoelii str. 17XNL] gi|23479061|gb|EAA15992.1| Polyprenyl synthetase, putative [Plasmodium yoelii yoelii] Length = 540 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 128/242 (52%), Gaps = 8/242 (3%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +N + A E IH +LLHDDV+D+S RRG ++ +GN+ S+L GDFLL++A + Sbjct: 265 ENQCKIIAASEIIHMGSLLHDDVIDESEKRRGSLSLHKKYGNKVSILSGDFLLARACSVF 324 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS--KTAVLFSAALEV 179 E + S V +L +GE Q +L+ N ++ + ++IKS KTA LFS Sbjct: 325 ASIGYPEICKRFSYVIESLIKGEFLQTNLNYN-NIEDALKTYLIKSYHKTASLFSHLFAC 383 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++I+ + + + + G+++G+AFQL DD LDY+ + + I D +N T P++ Sbjct: 384 IAIISFQNDKITELCFNLGLHIGMAFQLYDDYLDYKINP-KTNQPILNDIKNNIKTAPLL 442 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 ++ N S IN +S ++++ ++E+ ++ E + + +KA D L Sbjct: 443 FSYSYNP----NNVLSLINKKYLSNDDIQNVLFYIKESNSMKKNELCSLLHMKKAADILE 498 Query: 300 CL 301 L Sbjct: 499 SL 500 >gi|260424661|ref|ZP_05778957.1| geranyltranstransferase [Dialister invisus DSM 15470] gi|260402735|gb|EEW96282.1| geranyltranstransferase [Dialister invisus DSM 15470] Length = 287 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 126/228 (55%), Gaps = 13/228 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + +GGKR+RP L L +L + ++ +ACA+E +HT +L+HDD+ +D+ R Sbjct: 30 MQYSLMAGGKRIRPCLFLVLLDILGVDSNLYINVACALECVHTYSLIHDDLPGMDNDDYR 89 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-TLAEGELRQL-- 148 RGK+A +G + + GD LL+ AF ++ + + ++L+ T A G + Sbjct: 90 RGKLANHKKYGVGIATMAGDGLLTYAFELLACENNISFFKRIALIKILTAAAGPAGMVGG 149 Query: 149 ------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + K L ++E +L + KT L A+L+++S IAG+ + ++A+ +YG ++G Sbjct: 150 QAHDKGAEGKTLSLSELMFLD--QCKTGKLICASLDMASEIAGLSKNDKEAIHTYGKHIG 207 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + FQ+ DD+LD+ G EMGK +D K T +L + +R + Sbjct: 208 LLFQITDDLLDFNGVFQEMGKVPLQDISEHKCTYVTLLGKHQAQQRAR 255 >gi|315282228|ref|ZP_07870682.1| geranyltranstransferase [Listeria marthii FSL S4-120] gi|313614130|gb|EFR87820.1| geranyltranstransferase [Listeria marthii FSL S4-120] Length = 293 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 120/225 (53%), Gaps = 10/225 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALNADPLLGVRTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----CTLAEGEL--RQ 147 K ++G+ T++L GD LL+ AF ++ E ++ L+L+ + AEG + +Q Sbjct: 98 KWTNHKIFGDATAILAGDALLTLAFSILAEDENLSFETRLALIKEISFSSGAEGMVGGQQ 157 Query: 148 LSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + ++N VT E+ + KT L A+ ++ IA + + L+ + N+GI FQ Sbjct: 158 ADMEAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADSEQTKRLRIFAENIGIGFQ 217 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + DD+LD G+ +MGK G D K T P +L G KR N Sbjct: 218 ISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLD-GAKRALN 261 >gi|329298746|ref|ZP_08256082.1| polyprenyl synthetase [Plautia stali symbiont] Length = 299 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 20/243 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L AT ML + A A+E IH +L+HDD+ +DD A Sbjct: 34 NAMQYGALLGGKRLRPFLVYATGEMLRAEAASLDAPAAAVECIHAYSLIHDDLPAMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVA-----CT 139 LRRG+ + +G T++L GD L + AF ++ + Q+ + +S +A Sbjct: 94 LRRGQPTCHIKYGEDTAILAGDALQTLAFTILADQPMPGVSPQDRIAMISELAQASGVAG 153 Query: 140 LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS-- 196 + G+ L+ K++D+ + + +H + KT L AA+ + +L AG R AL Sbjct: 154 MCCGQALDLAAEGKSVDLNQLEQIH--RHKTGALIRAAVRLGALTAGAAG--RDALPQLD 209 Query: 197 -YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y +G+AFQ+ DD+LD G+ +GK G D GK T P +L + ++ ++ Sbjct: 210 IYANAIGLAFQVQDDILDVVGDTAVLGKTQGADQALGKSTYPALLGLDNARAKAQDLYRE 269 Query: 256 TIN 258 + Sbjct: 270 ALG 272 >gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 371 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 122/233 (52%), Gaps = 21/233 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP+L +A ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 103 IHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDN 162 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-------- 139 LRRGK V+G +VL GD LLS AF + S + + + +V Sbjct: 163 DDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIG 222 Query: 140 ---LAEGELRQLSLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L G++ +S S+ LD+ + +++H+ KTA L A+ + +++ G + Sbjct: 223 TEGLVAGQVVDIS-SEGLDLNDVGLEHLEFIHL--HKTAALLEASAVLRAIVGGGSDDEI 279 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + L+ + +G+ FQ+VDD+L E+GK G+D K T P I+ ++ Sbjct: 280 ERLRKFARCIGLLFQVVDDILYVTKSSKELGKTAGKDLIADKLTYPKIMGLEK 332 >gi|78357244|ref|YP_388693.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219649|gb|ABB38998.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 304 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/230 (34%), Positives = 121/230 (52%), Gaps = 15/230 (6%) Query: 30 IP-DVVK---YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 IP D++K Y + +GGKRLRP+L L TA + D + A AIE IHT +L+HDD+ Sbjct: 36 IPCDLLKAMDYSLLAGGKRLRPVLCLTTAGLFGLARDAVLPFAAAIELIHTYSLVHDDLP 95 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT 139 LRRG + +G T++L GD LL++AFC++ ++ L ALS+VA Sbjct: 96 AMDDDDLRRGMPSNHKKFGEATAILAGDGLLTEAFCLMASAGAAVEASRVLSALSVVAAA 155 Query: 140 LAEG-----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G ++ + + DV+ + + KT L + +L+AG + + + Sbjct: 156 AGAGGMVGGQMLDMEYTGRADVSLDMLRGMHAMKTGALIRCSCLAGALLAGAPHEDAERI 215 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 YG +G AFQ+VDD+LD G+ +GK +G D GK T P +L +R Sbjct: 216 SHYGEAIGAAFQIVDDILDETGDEATLGKPVGSDSGQGKNTYPSLLGLER 265 >gi|68072963|ref|XP_678396.1| polyprenyl synthetase [Plasmodium berghei strain ANKA] gi|56498851|emb|CAI04198.1| polyprenyl synthetase, putative [Plasmodium berghei] Length = 541 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 6/241 (2%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +N + A E IH +LLHDDV+D+S RRG ++ +GN+ S+L GDFLL++A + Sbjct: 266 ENQCKIIAASEIIHMGSLLHDDVIDESEKRRGSLSLHKKYGNKVSILSGDFLLARACSVF 325 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 E + S V +L +GE Q +L+ N++ + YL KTA LFS Sbjct: 326 ASIGYPEICKRFSYVIESLIKGEFLQTNLNYTNIEDALKTYLIKSYHKTASLFSHLFACI 385 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I+ + + + + G+++G+AFQL DD LDY+ + + I D +N T P++ Sbjct: 386 AIISFQNDQITELCFNLGLHIGMAFQLYDDYLDYKINP-KTNQPILNDIKNNIKTAPLLF 444 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++ N S IN +S ++++ ++E+ ++ E + + +KA D L Sbjct: 445 SYNYNP----NTVLSLINKKYLSNDDIQNVLFYIKESNSMKKNELCSLLHMKKAADILES 500 Query: 301 L 301 L Sbjct: 501 L 501 >gi|332637102|ref|ZP_08415965.1| trans-hexaprenyltranstransferase, component II [Weissella cibaria KACC 11862] Length = 329 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 11/308 (3%) Query: 19 ILKRICSDVEM-IPDVVKYLI--FS-GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +L RI ++++ DV LI FS GGK LRP T+ + + LA +E + Sbjct: 25 VLDRIEANLDANDADVEAALIDMFSHGGKLLRPAFTILIGRFFPAEREPLLNLAATVEML 84 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEAL 133 HTA+L+HDD++DDS RR + + +G + GD+L + F + T + Sbjct: 85 HTASLVHDDIIDDSPKRRHAESVQSRFGKDVAAYTGDYLFAVTFRTLADNTNDINVVRMA 144 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + + GEL Q + D+T +Y I KTA LF A + + Sbjct: 145 TRYLERILSGELTQRTNHYKRDMTIANYEDQIAGKTAALFVLAANLGIAASHAPKDFADL 204 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 + N+G+AFQ++DD+LDY + +GK D R G + P+I+A Q + + Sbjct: 205 ATDFAYNVGMAFQILDDLLDYSADSTTLGKPTLNDVREGVYSAPLIIAMQDNEEIQALLA 264 Query: 254 K-STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 K +TI+D + +L + ++R + AL E A +Y A + L +P+ K+ L+ Sbjct: 265 KGATISDDE--AVHLGE---LVRASGALAIAEDMAVAYTNTALERLSDMPEHESKRILLS 319 Query: 313 VVDFCLQR 320 + L R Sbjct: 320 ISQTLLTR 327 >gi|258676437|gb|ACV87215.1| solanesyl diphosphate synthase [Trypanosoma cruzi] gi|258676439|gb|ACV87216.1| solanesyl diphosphate synthase [Trypanosoma cruzi] gi|258676441|gb|ACV87217.1| solanesyl diphosphate synthase [Trypanosoma cruzi] gi|258676443|gb|ACV87218.1| solanesyl diphosphate synthase [Trypanosoma cruzi] gi|258676445|gb|ACV87219.1| solanesyl diphosphate synthase [Trypanosoma cruzi] gi|322816245|gb|EFZ24624.1| farnesyl synthetase, putative [Trypanosoma cruzi] Length = 363 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 26/250 (10%) Query: 33 VVKYLIFSGGKRLRPMLT--LATALMLEYRGDN-------------------HVLLACAI 71 + KY+ GK LRP L +A AL+ + + + L Sbjct: 61 IAKYVFSVSGKMLRPTLVAMMAHALLPPHVSEQIRAESIGSIDEISSGAIRPFLRLGEIT 120 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +HTATL+HDDV+D+S RRG+ ++ + +VL GDFLL++A + + + Sbjct: 121 ELLHTATLVHDDVMDNSNTRRGQPTVHCLYDAKRAVLAGDFLLARASIWIAALGNSRVVL 180 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV- 190 +S LA GE+ Q+ ++ E Y KTA L + +L ++++AG+ N+ Sbjct: 181 LMSTALEDLAAGEMMQMDGCFDI----ESYEQKSYCKTASLIANSLASTAVLAGLPNTAY 236 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A +G +LGIAFQ+VDD LD G+ +GK D G TLPV+LA + T+ + Sbjct: 237 EEAAAKFGKHLGIAFQIVDDCLDITGDDKNLGKPKMADMAEGIATLPVLLAAREETRVYE 296 Query: 251 NFWKSTINDG 260 + N G Sbjct: 297 AVRRRFKNPG 306 >gi|229916250|ref|YP_002884896.1| polyprenyl synthetase [Exiguobacterium sp. AT1b] gi|229467679|gb|ACQ69451.1| Polyprenyl synthetase [Exiguobacterium sp. AT1b] Length = 292 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 80/233 (34%), Positives = 120/233 (51%), Gaps = 24/233 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLA---TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 D + Y + +GGKR+RP L A T M RG +A ++E +HT +L+HDD+ Sbjct: 33 DAMAYSLEAGGKRIRPALVYAVLETYGMSLERGRE---VAASLEMVHTYSLIHDDLPAMD 89 Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV---------- 136 LRRG+ + T++L GD LL+ AF ++ +Q L AL +V Sbjct: 90 DDDLRRGRPTNHRQFDEATAILAGDALLTDAFRIL----TQMPLSALDIVEIIRIFGLAA 145 Query: 137 -ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + + G+L + K DVT E+ + + KT L ALE +++AG R LK Sbjct: 146 GSSGMVGGQLDDMLAEKRNDVTLEELQSIHERKTGALLVYALEAGAILAGASVEDRMHLK 205 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +G +LGIAFQ+ DD+LD G+ +GK +G D N K T P +L + G K+ Sbjct: 206 QFGRHLGIAFQIQDDILDVVGDEETIGKRVGSDELNDKTTYPKLLGLE-GAKQ 257 >gi|227891019|ref|ZP_04008824.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / heptaprenyl diphosphate synthase component II [Lactobacillus salivarius ATCC 11741] gi|227867428|gb|EEJ74849.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / heptaprenyl diphosphate synthase component II [Lactobacillus salivarius ATCC 11741] gi|300214709|gb|ADJ79125.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase / Farnesyltransferase / Heptaprenyl diphosphate synthase component II [Lactobacillus salivarius CECT 5713] Length = 328 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 119/237 (50%), Gaps = 7/237 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALML--EYRGDNHVL 66 KD+EKV + +I D + + + +GGK LRP L T L + R D+ L Sbjct: 14 KDIEKVKHNLQDKISVDYPDLQAALSKMASNGGKFLRPAFFLLFTKLTADSQNRVDDKKL 73 Query: 67 L--ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + A ++E +H +TL+HDD++DDS RRG+V+ + +G +V GD+L + F ++ + Sbjct: 74 IDIATSLEVLHMSTLIHDDIIDDSPKRRGEVSVQSQFGKDIAVYAGDYLFTVFFDLITDN 133 Query: 125 KSQEALEAL-SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + S + GEL Q+ N T +YL + KTA LF A + Sbjct: 134 VLDTPFFKINSRTMKKILLGELNQMKHRYNTQQTFLNYLRNVNGKTAYLFRLASAEGAYF 193 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 G + G N+GI+FQ++DD+LDY + + + K ED G +LP++L Sbjct: 194 GGASSQTVSLATRIGQNIGISFQILDDILDY-SDASRLNKPTLEDLATGVYSLPLLL 249 >gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis] Length = 382 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 12/223 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y I SGGKR+RP+L +A ++ + + +ACAIE IH TLLHDD+ +D+ +R Sbjct: 121 MRYSILSGGKRVRPVLCIAACELVGGTEELAMPIACAIEMIHVMTLLHDDMPCLDNDDIR 180 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTLAE---- 142 RGK V+G T+++ G LLS AF + + S+ L +S + T Sbjct: 181 RGKPTNHKVFGEGTALIAGVALLSVAFEHIAVSTSKTVGNDRILRMVSELGRTTGSQGIM 240 Query: 143 -GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G+ L + V + + KTAVL +++ ++I G + ++ Y + Sbjct: 241 GGQFLDLVSEGDASVNLQTLQWIHAHKTAVLLESSVVCGAIIGGASEDEIERIRRYASCV 300 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 GI FQ+VDD+LD E+GK G+D + K T P ++ ++ Sbjct: 301 GILFQVVDDILDVTKSSEELGKTAGKDLMSDKATYPKLMGLEK 343 >gi|257095634|ref|YP_003169275.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048158|gb|ACV37346.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 307 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/241 (31%), Positives = 120/241 (49%), Gaps = 18/241 (7%) Query: 20 LKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L R E IP ++Y GGKR+RP+L A + + + L A A+E IH Sbjct: 31 LARNLPPGEAIPGRLHQAMRYASLDGGKRVRPLLVFAAGDLTDAARERLELAASAVELIH 90 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 + +L+HDD+ +DD LRRG+ + + T++LVGD L S AF ++ + L Sbjct: 91 SYSLVHDDLPCMDDDVLRRGRPTCHVEYDEATALLVGDSLQSLAFELLAREDFGDGARQL 150 Query: 134 SLV--------ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 +V +C +A G+ L S+ K L+ E + +H +K T L AA+ + +L Sbjct: 151 EMVRLLARASGSCGMAGGQSIDLESVGKTLNQPELELMHALK--TGALIRAAVILGALCG 208 Query: 185 -GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + R+AL + G+ FQ+VDD+LD +GK G+D KPT +L + Sbjct: 209 TPLSTTEREALDRFAKRAGLLFQVVDDILDCTASTATLGKTAGKDAATEKPTYVSLLGLE 268 Query: 244 R 244 R Sbjct: 269 R 269 >gi|158317462|ref|YP_001509970.1| polyprenyl synthetase [Frankia sp. EAN1pec] gi|158112867|gb|ABW15064.1| Polyprenyl synthetase [Frankia sp. EAN1pec] Length = 338 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 116/233 (49%), Gaps = 3/233 (1%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGK +RP L L +A + + A A+E +H +LLHDD++D RR + A Sbjct: 52 NGGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDLMDGDRERRHRATAWT 111 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDV 156 V+G ++L GD LL A +++E + + A ++ L G+ L DV Sbjct: 112 VFGADGAILAGDALLGLATQVLLEVEGEPGRRAAVILGAGVQDLVRGQAEDLLFESRSDV 171 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + + LH+ KT L + + + +++AG + V L YG LG AFQL+DD+L G Sbjct: 172 SVAETLHMEDGKTGALLACSASLGAVLAGAPDEVVDGLAEYGSRLGTAFQLIDDLLGIWG 231 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 + GK + D R+ K ++PV++A + G +G+ S ++L + Sbjct: 232 DPAVTGKPVLNDLRSRKKSVPVVVALEAGGDDADELRAFLTEEGEASEDDLHR 284 >gi|71041847|pdb|1WL2|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima R90a Mutant Length = 299 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 108/184 (58%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E +H A+LLHDDV+D + RGK ++G++ +V GD +L AF Sbjct: 60 GEDAISSLAALELVHLASLLHDDVIDGARFARGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEIGNNKLRRAFLNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|71041848|pdb|1WL3|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima R91a Mutant gi|71041849|pdb|1WL3|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima R91a Mutant Length = 299 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 108/184 (58%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E +H A+LLHDDV+D + R GK ++G++ +V GD +L AF Sbjct: 60 GEDAISSLAALELVHLASLLHDDVIDGARFRAGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEIGNNKLRRAFLNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus coahuilensis m4-4] Length = 294 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 81/250 (32%), Positives = 127/250 (50%), Gaps = 36/250 (14%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHD 82 IP +K Y + +GGKR+RP+L LAT +E G + L A A+E +HT +L+HD Sbjct: 29 IPTSLKESMIYSVSAGGKRIRPVLLLAT---IEAFGKSPALGIKAAVALEMVHTYSLIHD 85 Query: 83 DVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---SQEALEALSLVA 137 D+ LRRGK V+G T++L GD LL+ +F ++ K Q +E + L A Sbjct: 86 DLPSMDDDDLRRGKPTNHKVFGEATAILAGDALLTYSFEVIASMKDILPQTKIELVRLFA 145 Query: 138 CTLA------------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 EGE + L+L E +Y+H ++KT L A+ ++I G Sbjct: 146 KAAGPEGMVGGQVADMEGERKTLTLE------ELEYIH--RNKTGKLLQYAVVAGAIIGG 197 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + K Y ++G+AFQ+ DD+LD G +++GK +G D N K T P +L + G Sbjct: 198 ASKEEVRLYKEYAEHIGLAFQIKDDILDIEGTEDKIGKRVGSDVNNDKSTYPSLLTLE-G 256 Query: 246 TKREKNFWKS 255 K + + ++ Sbjct: 257 AKEKLEYHRN 266 >gi|325131595|gb|EGC54302.1| geranyltranstransferase [Neisseria meningitidis M6190] Length = 298 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 14/232 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + E + AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G ++L GD L +QAF ++ A Sbjct: 80 IHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G R ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSC 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|217031457|ref|ZP_03436962.1| hypothetical protein HPB128_21g15 [Helicobacter pylori B128] gi|298736814|ref|YP_003729344.1| octaprenyl-diphosphate synthase [Helicobacter pylori B8] gi|216946657|gb|EEC25253.1| hypothetical protein HPB128_21g15 [Helicobacter pylori B128] gi|298356008|emb|CBI66880.1| octaprenyl-diphosphate synthase [Helicobacter pylori B8] Length = 307 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 14/215 (6%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L+ + D +L L +E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLDEKTDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K EA+ + LS L+ GE+ + + ++ + Sbjct: 92 INALFGNFNAVMLGDVFYSKAFFEL--SKMGEAIAQILSNAVLRLSRGEIEDVFVGESFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ N + +G+N G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFIEASLKSMAILL---NKNAKMYADFGLNFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +GK DF+ GK TLP +L +++ + E+ Sbjct: 207 QDAKTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQ 241 >gi|283781730|ref|YP_003372485.1| polyprenyl synthetase [Pirellula staleyi DSM 6068] gi|283440183|gb|ADB18625.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068] Length = 296 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 132/269 (49%), Gaps = 23/269 (8%) Query: 23 ICSDVEMIPDV-------VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 + + E PDV +++ + + KRLRP+L L Y + A A+E IH Sbjct: 22 LVATTEYGPDVPTHLAEAIRHSLLAPAKRLRPLLVLIACEACGYDRSKAMPAAVAVELIH 81 Query: 76 TATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--------IETK 125 T +L+HDD+ +RRG+ + +G T +L GD LL+QAF ++ + K Sbjct: 82 TYSLIHDDLPAMDDDDMRRGRPSCHAKFGESTGILAGDALLAQAFEVLAADHLPGPVVAK 141 Query: 126 SQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 + L A++ A L G+ L +L + + +H + KT + +L + ++IA Sbjct: 142 CVKEL-AVAAGAANLVGGQHDDLGAEFADLGLASLEAIH--RRKTGAMICVSLRLGAIIA 198 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G + V AL YG LG+AFQ+VDD+LD G+ MGK +G+D GK T P +L + Sbjct: 199 GASSEVLTALSQYGERLGLAFQIVDDLLDLEGDQQLMGKRVGKDSEAGKLTYPKLLGAEA 258 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFII 273 +R + I +S ++L +I Sbjct: 259 SRQRAEMLVAEAI--ASVSRDDLSSGALI 285 >gi|323340824|ref|ZP_08081076.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644] gi|323091947|gb|EFZ34567.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644] Length = 299 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 117/223 (52%), Gaps = 11/223 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDV--VD 86 + D + Y + +GGKR+RPM+ + + + D VL CA +EF+HT +L+HDD+ +D Sbjct: 34 LHDSMSYSVDAGGKRIRPMIIMLVCDSFKKKIDQDVLDVCASLEFVHTYSLIHDDLPAMD 93 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CM---VIETKSQEALEA-LSLVACT-- 139 + LRRGK +V+G ++L GD LL+ AF C+ I K++ L + L+ A Sbjct: 94 NDELRRGKATNHVVFGESMAILAGDGLLTTAFECLGQTSISAKTKCTLMSRLAFAAGPQG 153 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + G++ + ++ + +T +V KT L A E ++AGV + LK G Sbjct: 154 MVNGQVGDIE-NEGVKLTLPQLRNVHAQKTGALLRYAFESGGILAGVSDRALGELKELGN 212 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G+AFQ+ DD++D EMGK +D K T P +L Sbjct: 213 CFGLAFQIYDDIMDVVSTPEEMGKATHKDQSEHKNTYPGLLGL 255 >gi|304415488|ref|ZP_07396128.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1] gi|304282658|gb|EFL91181.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1] Length = 313 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 75/264 (28%), Positives = 135/264 (51%), Gaps = 18/264 (6%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 NF+ + + S + + ++Y + GGKR+RP L AT M + + A A+E IH Sbjct: 27 NFI--QPLPSHSRQLIEAIRYTVLCGGKRIRPYLVYATGKMFGLSPGSLDVAAAAVECIH 84 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-----QE 128 +L+HDD+ +DD LRRG+ + + +G ++L GD L + AF ++ + + Sbjct: 85 AYSLVHDDLPAMDDDNLRRGQPSCHIKFGEAIAILAGDALQTLAFSLLADQPMPNVTLEN 144 Query: 129 ALEALSLVACTLAEGEL---RQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 L+ +S +A + G + + L L+ ++ ++ + + KT L AA+ + +L A Sbjct: 145 RLKIVSELAKAIGAGGMCAGQALDLAAEHCQISLASLEKIHRHKTGALIRAAVRIGALAA 204 Query: 185 GVQNS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G ++ L Y +G+AFQ+ DD+LD GE + MGK G D + K T +L + Sbjct: 205 GERSEKTLSLLDDYADAIGLAFQVQDDILDITGETDRMGKQQGADQQRNKSTYSSLLGLE 264 Query: 244 RGTKREKNFWKSTINDGKISVENL 267 + K F + D +I++++L Sbjct: 265 GAKIKAKKFCQ----DAQIALDSL 284 >gi|257056312|ref|YP_003134144.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] gi|256586184|gb|ACU97317.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] Length = 335 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 1/254 (0%) Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A A+E +H +LLHDDV+D RR + A ++G ++L GD LL+ A ++ + Sbjct: 80 AVAVELVHNFSLLHDDVMDGDTERRHRPTAWRLFGTPAAILAGDALLTLAMEVLDSVGER 139 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A + L+ L EG+ + V+ E+ L + KTA L + + E+ +L+ G Sbjct: 140 SANQRLAAAVHRLIEGQSADIEYESRTIVSVEECLDMEDGKTASLMACSAELGALLGGAD 199 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + AL +G NLG+ FQLVDD+L G GK + D R K ++PV++A T Sbjct: 200 DRTVAALGDFGRNLGMGFQLVDDLLGILGSPEVTGKPVLADLRVRKKSVPVVVALNADTD 259 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL-PDSSW 306 + + + ++++ ++ + A+ T RA+ Y A+ SL + P Sbjct: 260 SAAALQEFYRRERPPNEDDVRTMAALIEDTGAITWTRERAHRYIAAAETSLATVNPPEEV 319 Query: 307 KKSLMEVVDFCLQR 320 + +L ++ F ++R Sbjct: 320 RAALADLTRFVVER 333 >gi|107026831|ref|YP_624342.1| polyprenyl synthetase [Burkholderia cenocepacia AU 1054] gi|116691975|ref|YP_837508.1| polyprenyl synthetase [Burkholderia cenocepacia HI2424] gi|170736031|ref|YP_001777291.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3] gi|105896205|gb|ABF79369.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia AU 1054] gi|116649975|gb|ABK10615.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia HI2424] gi|169818219|gb|ACA92801.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3] Length = 294 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 117/224 (52%), Gaps = 14/224 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLA 141 LRRGK + + T++LVGD L SQAF + + ++ ++ +LV + +A Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAEALSPVQQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR--QALKSYGM 199 G+ L+ S L +T E + + KT L AA+ + +L AG S AL Y Sbjct: 154 GGQAIDLA-SVGLKLTREQLETMHRMKTGALLRAAVRMGAL-AGETPSAETMAALDVYAG 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+VDD+LD + +GK G+D N KPT IL + Sbjct: 212 AVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLE 255 >gi|313608930|gb|EFR84685.1| geranyltranstransferase [Listeria monocytogenes FSL F2-208] Length = 293 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 119/227 (52%), Gaps = 14/227 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEGEL 145 K V+G+ T++L GD LL+ AF ++ E ++ ++L+ A + G+L Sbjct: 98 KYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEGMVGGQL 157 Query: 146 RQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + SK + + E +H K+ ++F A+ ++ IA + L+ + N+GI Sbjct: 158 ADMEAESKQVTLEELSSIHARKTGELLIF--AITSAAKIAEADPEQTKRLRIFAENIGIG 215 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 FQ+ DD+LD G+ +MGK G D K T P +L G KR N Sbjct: 216 FQISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLD-GAKRALN 261 >gi|256379027|ref|YP_003102687.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827] gi|255923330|gb|ACU38841.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827] Length = 346 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 3/262 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP+L L A + R ++ + A A+E +H +LLHDDV+D A RR + A V+ Sbjct: 62 GKAIRPVLVLLAARAVGGRAEDALPAAVAVELVHNFSLLHDDVMDGDATRRHRPTAWAVF 121 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLSLSKNLDVTE 158 G +VL GD L++ A ++ + A + L++ + E G+ L + +V Sbjct: 122 GVNAAVLAGDALMTLALDVLAGSGHPAAARGIVLLSAAVQELLDGQSSDLGFEERDEVGV 181 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + + + + KTA L A + +L G L +G G+AFQ VDD+L G+ Sbjct: 182 AECVRMAEGKTAALLGACCSLGALFGGGSADQVGELGLFGERTGLAFQFVDDLLGIWGDP 241 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278 GK + D RN K +LPV+ A ++ + G+++ L++A ++ + Sbjct: 242 AATGKPVHSDLRNRKKSLPVVAALASRSQAGRELAGLYRGRGELAGSALEEAAGLVEQAG 301 Query: 279 ALVDTEYRAYSYGQKAKDSLRC 300 A + RA +A+ LR Sbjct: 302 ARAWGQRRADELLAQARTHLRA 323 >gi|291536359|emb|CBL09471.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis M50/1] Length = 296 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 118/218 (54%), Gaps = 16/218 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV--VDD 87 + + Y +GGKRLRP+L L T + + G + V+ AIE IHT +L+HDD+ +D+ Sbjct: 34 EAMNYSFLAGGKRLRPILMLETYRL--FGGKSKVIEPFMAAIEMIHTYSLVHDDLPAMDN 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACT--- 139 RRGK +V+G ++L GD LL+ AF + IE ++ +A+ +++ Sbjct: 92 DEYRRGKKTTHVVYGEAMAILAGDALLTYAFETAAKALDIEPQNPGIGKAIRILSAKAGI 151 Query: 140 --LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + G+ + D+T+E + + KT+ L A++ + +++AG S ++ ++ Sbjct: 152 YGMVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKIVEEV 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +G+AFQ+ DD+LD + +GK IG D +N K T Sbjct: 212 ASKVGLAFQIQDDILDVTSTMEVLGKPIGSDEKNHKST 249 >gi|255322657|ref|ZP_05363801.1| prenyl transferase [Campylobacter showae RM3277] gi|255300218|gb|EET79491.1| prenyl transferase [Campylobacter showae RM3277] Length = 297 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 5/183 (2%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E IH A+LLHDDV+DD+ RRG + +G + +V++GD L S+ F + + + Sbjct: 52 CAIIELIHLASLLHDDVIDDADTRRGSPSINASFGTKNAVMLGDILYSKGFYELSKFPYE 111 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A E +S L+ GE+ + LS + + Y +I KTAVL AA V +++AG+ Sbjct: 112 IAGE-ISGAVSKLSVGEMMDVDLSAKFNDDKSAYETMIYYKTAVLIEAAAAVGAMLAGLD 170 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 S K YG NLG+AFQ++DD+LD + +GK DF+ GK TLP I ++ + Sbjct: 171 AS---NFKIYGKNLGLAFQIIDDILDVTQDAATLGKPNFSDFKEGKTTLPYIYLYESLNE 227 Query: 248 REK 250 +K Sbjct: 228 TDK 230 >gi|261404272|ref|YP_003240513.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10] gi|261280735|gb|ACX62706.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10] Length = 334 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 20/252 (7%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKY-----LIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D+ + L+ + + SD ++ P V LI +GGKRLRP++ + + E + V Sbjct: 10 DLASFDRLLREVVSSDRDLPPSSVVLSSVMDLINAGGKRLRPLMVVLGSRFGESGHEPAV 69 Query: 66 L-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-- 122 + A +E++H A+L+HDD++D S +RRG QT+V +G++++++A Sbjct: 70 MKTAVLLEYLHMASLVHDDIIDQSDMRRGMPTLHETTDVQTAVHIGNYMIARAIEWAAGH 129 Query: 123 ----------ETKSQEA--LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170 + EA L L+ + L GE QL + +T E YL + KTA Sbjct: 130 PGGDPDGNSEDVSEDEAYRLAELAALVTELCMGEYDQLQHRFDFGLTMEQYLEKTRCKTA 189 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 +L + L+ + A + L +G +LG+AFQ+ DD+LD+ +GK G D + Sbjct: 190 LLMAHCLKAGAEAAHADAGTAERLFQFGESLGMAFQIRDDLLDFTKPREAIGKPAGADLQ 249 Query: 231 NGKPTLPVILAF 242 NG TLPV+ A Sbjct: 250 NGNITLPVLYAL 261 >gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha haplocalyx var. piperascens] Length = 377 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 19/230 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RPML +A ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 113 IHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDN 172 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA-----E 142 LRRGK + +G +VL GD LLS AF V E + V LA E Sbjct: 173 DDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSVGSE 232 Query: 143 GELRQLSLSKNLDVTEE-------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G L + +DV E D+L I KTA L ++ + +++ G L Sbjct: 233 G----LVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGNEEEVAKL 288 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + + +G+ FQ+VDD+LD E+GK G+D K T P ++ ++ Sbjct: 289 RKFANCIGLLFQVVDDILDVTKSSKELGKKAGKDLVADKTTYPKLIGVEK 338 >gi|229543903|ref|ZP_04432962.1| Polyprenyl synthetase [Bacillus coagulans 36D1] gi|229325042|gb|EEN90718.1| Polyprenyl synthetase [Bacillus coagulans 36D1] Length = 289 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 119/232 (51%), Gaps = 14/232 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ D + Y + +GGKR+RP+L L+T L + ACA+E +HT +L+HDD+ Sbjct: 27 VLKDAMHYSLQAGGKRIRPLLLLSTVSALGKPAGRGMQTACAVEMLHTYSLIHDDLPAMD 86 Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--------ALEALSLVAC 138 LRRGK V+G ++L GD LL+ +F ++ E + AL A S Sbjct: 87 DDDLRRGKPTNHKVFGEAVAILAGDGLLTHSFRLIAEDPGLDDALKVKLIALLAKSAGPE 146 Query: 139 TLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + G++ + +K L + E Y+H K+ + FS + ++I G + + Sbjct: 147 GMVAGQVADMEGENKTLTLEELQYIHAHKTGKLLRFS--VLAGAMIGGASTEQLEKFGQF 204 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +LG+AFQ+ DD+LD GE ++GK +G D K T P +L + G K+E Sbjct: 205 ADHLGLAFQIRDDILDIEGEQEKIGKRVGSDESRHKSTYPALLTLE-GAKQE 255 >gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 371 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 121/233 (51%), Gaps = 21/233 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L +A ++ + CA+E IHT +L+HDD+ +D+ Sbjct: 103 IHEAMSYSLLAGGKRVRPVLCIAACELVGGEESTAMPARCAVEMIHTMSLIHDDLPCMDN 162 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-------- 139 LRRGK V+G +VL GD LLS +F + S + + + +V Sbjct: 163 DDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLASATSSDVVSPVRVVRAVGELAKAIG 222 Query: 140 ---LAEGELRQLSLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L G++ +S S+ LD+ + +++H+ KTA L A+ + +++ G + Sbjct: 223 TEGLVAGQVVDIS-SEGLDLNDVGLEHLEFIHL--HKTAALLEASAVLGAIVGGGSDDEI 279 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + L+ + +G+ FQ+VDD+LD E+GK G+D K T P I+ ++ Sbjct: 280 ERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEK 332 >gi|115358000|ref|YP_775138.1| polyprenyl synthetase [Burkholderia ambifaria AMMD] gi|115283288|gb|ABI88804.1| farnesyl-diphosphate synthase [Burkholderia ambifaria AMMD] Length = 294 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 14/223 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLA 141 LRRGK + + T++LVGD L SQAF + + + ++ +LV + +A Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALSPVQQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--ALKSYGM 199 G+ L+ S L +T E + + KT L AA+ + +L AG S AL Y Sbjct: 154 GGQAIDLA-SVGLKLTREQLEKMHRMKTGALLRAAVRMGAL-AGETPSAETLAALDVYAA 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D N KPT IL Sbjct: 212 AVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGL 254 >gi|315303030|ref|ZP_07873740.1| geranyltranstransferase [Listeria ivanovii FSL F6-596] gi|313628597|gb|EFR97020.1| geranyltranstransferase [Listeria ivanovii FSL F6-596] Length = 293 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 10/225 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALNTDPMRGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----CTLAEGEL--RQ 147 K V+G+ T++L GD LL+ AF ++ E + L+L+ + AEG + +Q Sbjct: 98 KRTNHKVYGDATAILAGDALLTLAFSVLAEDANLTFETRLALINELSFSSGAEGMVGGQQ 157 Query: 148 LSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + ++N +T E+ + KT L A+ ++ IA + L+ + N+G+ FQ Sbjct: 158 ADMEAENKKITLEELATIHARKTGELLIFAVTSAAKIAEATPEQTKRLRIFAENIGVGFQ 217 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + DD+LD G+ +MGK G D K T P +L G KR N Sbjct: 218 ISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLD-GAKRALN 261 >gi|288553327|ref|YP_003425262.1| geranyltranstransferase [Bacillus pseudofirmus OF4] gi|288544487|gb|ADC48370.1| geranyltranstransferase [Bacillus pseudofirmus OF4] Length = 296 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 129/248 (52%), Gaps = 19/248 (7%) Query: 18 LILKRICSDVEMI--PDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 LI R+ S +E + PD +K Y + +GGKR+RP+L LAT ++ LACAI Sbjct: 15 LIDARLPSYIEDLRAPDTLKQAMTYSLKAGGKRVRPLLLLATLDGFNRPIEDGFDLACAI 74 Query: 72 EFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS--Q 127 E IHT +L+HDD+ RRG+ V+G ++L GD LL+ +F ++ + + Sbjct: 75 EMIHTYSLIHDDLPAMDDDDTRRGQPTNHKVYGEAMAILAGDALLTYSFELITSMSAVRE 134 Query: 128 EALEALSLV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 E +AL+LV C + G++ + +N +T ++ + KT L + ++ Sbjct: 135 EPAKALTLVRELAKASGPCGMVGGQVADIE-GENRSLTVQELADIHHHKTGDLLAYSIIA 193 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++A + L+ + + LG+ FQ+ DD+LD G+ +++GK +G D N K T P + Sbjct: 194 GAVLADASEEDLEHLRMFAIELGLLFQIKDDILDVEGDSDKLGKPVGSDDGNNKSTYPSL 253 Query: 240 LAFQRGTK 247 L K Sbjct: 254 LGLDEAKK 261 >gi|294501200|ref|YP_003564900.1| geranyltranstransferase [Bacillus megaterium QM B1551] gi|294351137|gb|ADE71466.1| geranyltranstransferase [Bacillus megaterium QM B1551] Length = 298 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 79/253 (31%), Positives = 127/253 (50%), Gaps = 44/253 (17%) Query: 30 IPDVVK-------------YLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFI 74 +P+VVK Y + +GGKRLRP+L AT + + D + L ACA+E I Sbjct: 22 LPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFAT--LHAFGKDESMGLETACAVEMI 79 Query: 75 HTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 HT +L+HDD+ LRRGK V+G T++L GD LL+ +F ++ E E Sbjct: 80 HTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQLISEAAHPEITSH 139 Query: 133 LSL---------------VACTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 + L ++ +A EGE +QL+L E +Y+H+ KT L Sbjct: 140 MKLQLITELVKASGTEGMISGQVADMEGEKKQLTLD------ELEYIHL--HKTGKLLGF 191 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++ +++A ++ L+ + ++G+AFQ+ DD+LD G ++GK IG D N K T Sbjct: 192 CVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDTENEKTT 251 Query: 236 LPVILAFQRGTKR 248 P +L + ++ Sbjct: 252 YPSLLGMEAAKEK 264 >gi|109947883|ref|YP_665111.1| octaprenyl-diphosphate synthase [Helicobacter acinonychis str. Sheeba] gi|109715104|emb|CAK00112.1| octaprenyl-diphosphate synthase [Helicobacter acinonychis str. Sheeba] Length = 307 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 117/216 (54%), Gaps = 16/216 (7%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L+ + D +L L +E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLDTKIDAIILDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQLSLSKNL 154 ++GN +V++GD S+AF E E L A LS L+ GE+ + + ++ Sbjct: 92 INALFGNFNAVMLGDVFYSKAF---FELSKMENLIAQILSNAVLRLSRGEIEDVFVGESF 148 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 + ++ Y +++ KTA A+L+ +++ N + ++G+N G+AFQ++DD+LD Sbjct: 149 NSDKQKYWRILEDKTAHFMEASLKSMAILL---NKDAKIYANFGLNFGMAFQIIDDLLDI 205 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +GK DF+ GK TLP +L +++ K E+ Sbjct: 206 TQNATTLGKPNFSDFKEGKTTLPYLLLYEKLNKSEQ 241 >gi|49259555|pdb|1VG3|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima A76yS77F MUTANT Length = 299 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 107/184 (58%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E +H LLHDDV+D + RRGK ++G++ +V GD +L AF Sbjct: 60 GEDAISSLAALELVHLYFLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEIGNNKLRRAFLNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|308388479|gb|ADO30799.1| geranyltranstransferase [Neisseria meningitidis alpha710] gi|325130987|gb|EGC53714.1| geranyltranstransferase [Neisseria meningitidis OX99.30304] gi|325137086|gb|EGC59682.1| geranyltranstransferase [Neisseria meningitidis M0579] gi|325202912|gb|ADY98366.1| geranyltranstransferase [Neisseria meningitidis M01-240149] gi|325207289|gb|ADZ02741.1| geranyltranstransferase [Neisseria meningitidis NZ-05/33] Length = 298 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 14/232 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y + GGKRLRPML LA + + E + AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAVLDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++LVGD L +QAF ++ A Sbjct: 80 IHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSC 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula] Length = 372 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 127/243 (52%), Gaps = 19/243 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + +GGKR+RP+L LA ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 110 EAMRYSLLAGGKRVRPVLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDD 169 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSLVACT-----L 140 LRRGK V+G +VL GD LL+ AF + ++ + A+ +A + L Sbjct: 170 LRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTVDVSPARIVRAIGELAKSIGSEGL 229 Query: 141 AEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++ ++ DV E +++H+ KTA L A+ + +++ G + + L+ + Sbjct: 230 VAGQVVDINSEGLSDVGLERLEFIHL--HKTAALLEGAVVLGAILGGGSDEDVEKLRKFA 287 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+ FQ+VDD+LD E+GK G+D K T P +L G ++ K F + Sbjct: 288 TYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLL----GIEKSKEFAEKLNR 343 Query: 259 DGK 261 D + Sbjct: 344 DAQ 346 >gi|254361652|ref|ZP_04977790.1| geranyltranstransferase [Mannheimia haemolytica PHL213] gi|153093170|gb|EDN74186.1| geranyltranstransferase [Mannheimia haemolytica PHL213] Length = 297 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 90/299 (30%), Positives = 148/299 (49%), Gaps = 36/299 (12%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 DLT +FL K +D P + + Y + GGKR+RP L AT ML + Sbjct: 8 DLTHLQQRINHFLAEKLKTTDSVGSPLVEAMAYAVLLGGKRVRPFLIYATGRMLGVPLEK 67 Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 A A+E IH +L+HDD+ +DD LRRGK + + T++L GD L S AF ++ Sbjct: 68 LDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPTCHIAFDEATAILAGDALQSFAFELL 127 Query: 122 IE----TKSQEALEALSLVACTLAEGELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFS 174 T ++ ++ L + A+G SL ++N V+ E+ + ++KT L Sbjct: 128 ATDPHLTDREKVVQVTELATASGAKGMCLGQSLDLIAENKAVSLEELELIHRNKTGALI- 186 Query: 175 AALEVSSLIAGV------QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 +SS++ G+ QN +++Q L +Y +G+AFQ+ DD+LD GE +++GK +G Sbjct: 187 ----LSSVMMGLNLSEYSQNVAIKQPLVNYAKAIGLAFQVQDDILDVIGETDKIGKIVGS 242 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK---------KAFIIMREN 277 D K T P +L ++ + +++ ++ S+E L FI+ REN Sbjct: 243 DEHLNKSTYPKLLGLDGAKQKAEMLYQTALH----SLEQLPFDTTALKELANFIVKREN 297 >gi|317180046|dbj|BAJ57832.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F32] Length = 307 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 141/265 (53%), Gaps = 18/265 (6%) Query: 42 GKRLRPMLTLATALMLEYRGD----NHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L + D + L CAI E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLNEKTDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K E++ +ALS L+ GE+ + + + + Sbjct: 92 INALFGNFNAVMLGDVFYSKAFFEL--SKMGESIAKALSNAVLRLSRGEIEDVFVGECFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ N + +G+N G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFIEASLKSMAILL---NKDAKIYADFGLNFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAFIIM 274 + +GK DF+ GK TLP +L +++ + E+ S D +E K+ F Sbjct: 207 QDAKTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQGLLISYFKQDSHEIIEWTKEKF--- 263 Query: 275 RENRALVDTEYRAYSYGQKAKDSLR 299 ++ + +T A Y +KA ++++ Sbjct: 264 KQYGIIEETLKTAQVYSKKALEAIK 288 >gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM 8271] gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM 8271] Length = 289 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 78/260 (30%), Positives = 134/260 (51%), Gaps = 31/260 (11%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 +++ + + Y + +GGKR+RP+L LA A ++ + + AC +E IHT +L+HDD+ + Sbjct: 26 DVLSESMAYTLMAGGKRVRPVLALAAAEIVGGAPEVVIPCACGLEMIHTYSLIHDDLPAL 85 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----------QEALEALSL 135 D+ RRG+ V+G T++L GD LL+ F ++ +E EA+ Sbjct: 86 DNDDYRRGRPTNHKVFGEATALLAGDGLLTYGFQLLASDVPVPLERQIKVIRETAEAVGW 145 Query: 136 VACTLAE-----GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNS 189 + GE +LS+S+ +T +L KT L +A++ + +++ G ++ Sbjct: 146 QGMVRGQVLDTLGEKGELSVSQ---ITNIHHL-----KTGALLTASVRLGAILGGGLEEE 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +RQ L Y LG+AFQ+ DD+LD G + +GK +G D + K T P IL G Sbjct: 198 IRQ-LSIYAAALGLAFQIKDDILDIEGTEDALGKPVGSDLKLQKSTYPSIL----GMDGA 252 Query: 250 KNFWKSTINDGKISVENLKK 269 K K I + K ++E ++ Sbjct: 253 KIQLKQKIIEAKTALEKFEE 272 >gi|319638772|ref|ZP_07993531.1| geranyltranstransferase [Neisseria mucosa C102] gi|317400013|gb|EFV80675.1| geranyltranstransferase [Neisseria mucosa C102] Length = 298 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 119/224 (53%), Gaps = 14/224 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y+ GGKRLRP+L LA + + E + AIE +H +L+HDD+ +D+ + Sbjct: 38 EAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDS 97 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------TLA 141 LRRGK + + T++LVGD L +QAF ++ A L++++ +A Sbjct: 98 LRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRPTGLPAERQLAMLSTLAQASGSLGMA 157 Query: 142 EGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL-IAGVQNSVRQALKSYGM 199 G+ L+ + K ++ E + +H +K T L AA+ + +L + + Q L Y Sbjct: 158 GGQAIDLANVGKAMNQAELEQMHSLK--TGALIRAAVALGALSCPDLTPAQIQTLDRYAA 215 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+AFQ++DDVLD + +GK G+D N KPT ++ Q Sbjct: 216 KLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMGLQ 259 >gi|188527047|ref|YP_001909734.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori Shi470] gi|188143287|gb|ACD47704.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori Shi470] Length = 307 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 129/234 (55%), Gaps = 11/234 (4%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E++ +ALS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 121 ESIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILL-- 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N + +G+N G+AFQ++DD+LD + +GK DF+ GK TLP +L +++ Sbjct: 179 -NKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTTLPYLLLYEKLN 237 Query: 247 KREKNFWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + E+ S D +E K+ F ++ + +T A Y +KA ++++ Sbjct: 238 QHEQGLLISYFKQDSHEIIEWTKEKF---KQYGIIEETLKTAQVYSKKALEAIK 288 >gi|308184045|ref|YP_003928178.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori SJM180] gi|308059965|gb|ADO01861.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori SJM180] Length = 307 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 131/234 (55%), Gaps = 11/234 (4%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E++ +ALS L+ GE+ + + ++ + ++ Y +++ KTA A+L+ +++ Sbjct: 121 ESIAQALSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKTAHFIEASLKSMAILL-- 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N + +G++ G+AFQ++DD+LD + +GK DF+ GK TLP +L +++ Sbjct: 179 -NKDAKMYADFGLHFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTTLPYLLLYEKLN 237 Query: 247 KREKNFWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + E+ S D +E K+ F +++ + +T A Y +KA ++++ Sbjct: 238 QHEQGLLISYFKQDSHEIIEWTKEKF---KQHGIIEETLKIAQVYSKKALEAIK 288 >gi|296333415|ref|ZP_06875868.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675079|ref|YP_003866751.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149613|gb|EFG90509.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413323|gb|ADM38442.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str. W23] Length = 296 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 124/230 (53%), Gaps = 17/230 (7%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 +PD +K Y + +GGKRLRP++ LA + + + CA+E IHT +L+HDD+ Sbjct: 29 MPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLP 88 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALSLV----- 136 LRRGK V+G T+VL GD LL+++F ++ S E A + L LV Sbjct: 89 CMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELIS 148 Query: 137 -ACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 A T + G++ + ++N VT E+ + + KTA L S + +++A + Sbjct: 149 AAGTEGMVGGQVADME-AENRQVTLEELESIHERKTAKLLSFCVIAGAILADAPEEDIET 207 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 L+++ ++GI FQ+ DD+LD G ++GK +G D N K T P +L+ + Sbjct: 208 LRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNEKSTYPSLLSLE 257 >gi|295706547|ref|YP_003599622.1| geranyltranstransferase [Bacillus megaterium DSM 319] gi|294804206|gb|ADF41272.1| geranyltranstransferase [Bacillus megaterium DSM 319] Length = 298 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 79/253 (31%), Positives = 127/253 (50%), Gaps = 44/253 (17%) Query: 30 IPDVVK-------------YLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFI 74 +P+VVK Y + +GGKRLRP+L AT + + D + L ACA+E I Sbjct: 22 LPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFAT--LHAFGKDESMGLETACAVEMI 79 Query: 75 HTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 HT +L+HDD+ LRRGK V+G T++L GD LL+ +F ++ E E Sbjct: 80 HTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQLISEAAHPEITSH 139 Query: 133 LSL---------------VACTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 + L ++ +A EGE +QL+L E +Y+H+ KT L Sbjct: 140 MKLQLITELVKASGTEGMISGQVADMEGEKKQLTLD------ELEYIHL--HKTGKLLGF 191 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++ +++A ++ L+ + ++G+AFQ+ DD+LD G ++GK IG D N K T Sbjct: 192 CVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDTENEKTT 251 Query: 236 LPVILAFQRGTKR 248 P +L + ++ Sbjct: 252 YPSLLGMEAAKEK 264 >gi|222099500|ref|YP_002534068.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359] gi|221571890|gb|ACM22702.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359] Length = 272 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 127/252 (50%), Gaps = 10/252 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + +GGKR+RP+L L + + V +A A+E HTA+L+HDD+ +D++ R Sbjct: 26 MQYSVTAGGKRIRPLLVLTVGEDIGVEEERLVDVAVAVELFHTASLVHDDLPPIDNADFR 85 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RGK + +G ++L GD L AF + + + + E S A L GE + Sbjct: 86 RGKPSCHRAYGEGIALLAGDGLFFLAFSQIAKVREPKLFEEFSETAYKLLLGEAMDVEFE 145 Query: 152 KN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + +++ E + KT LF+ L+ G+ ++ +K G G+AFQ+ DD Sbjct: 146 RQEKEISVEMVEKMYSFKTGALFAFCFSAPFLLKGLDHTF---VKKLGEKFGVAFQIYDD 202 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 + D G + ++GK++G+D + K TL + Q+ + +++ + + E L + Sbjct: 203 LKDVLGSLEKLGKDVGKDVK--KVTLVKKMGVQKAKQLADKYYEEVLE--ALESEGLHRT 258 Query: 271 FIIMRENRALVD 282 F +R + +V+ Sbjct: 259 FDFLRNLKKMVE 270 >gi|304395483|ref|ZP_07377366.1| Polyprenyl synthetase [Pantoea sp. aB] gi|304356777|gb|EFM21141.1| Polyprenyl synthetase [Pantoea sp. aB] Length = 299 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 122/243 (50%), Gaps = 28/243 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y GGKRLRP L AT ML + A A+E IH +L+HDD+ +DD A Sbjct: 34 NAMHYGALLGGKRLRPFLVYATGEMLHADPASLDAPAAAVECIHAYSLIHDDLPAMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL-------------- 135 LRRG+ + +G T++L GD L + AF ++ + EA+ +S Sbjct: 94 LRRGQPTCHIKYGEDTAILAGDALQTLAFSILAD----EAMPGVSAEYRLMMLSELAKAS 149 Query: 136 -VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 VA L + K++D+ + + +H + KT L +A+ + +L AG ++ R+AL Sbjct: 150 GVAGMCGGQALDLAAEGKSVDLDQLEQIH--RHKTGALIRSAVRLGALTAG--DAGREAL 205 Query: 195 K---SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 Y +G+AFQ+ DD+LD G+ +GK G D GK T P +L + + ++ Sbjct: 206 PLLDRYAEAIGLAFQVQDDILDVVGDTAVIGKRQGADQDLGKSTYPSLLGLENARAKARD 265 Query: 252 FWK 254 ++ Sbjct: 266 LYQ 268 >gi|212636370|ref|YP_002312895.1| polyprenyl synthetase [Shewanella piezotolerans WP3] gi|212557854|gb|ACJ30308.1| Polyprenyl synthetase [Shewanella piezotolerans WP3] Length = 293 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 13/269 (4%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV---VKYLIFSGGKRLRPMLTLATALMLEY 59 ML + + +++N L+ RI + ++ P + +K+ GGKR+RP L A ML Sbjct: 1 MLAESLVTYQQRINQLLATRIDALDDIDPKLKAAMKHGALIGGKRIRPFLVYAIGEMLNV 60 Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 + + A AIE +H +L+HDD+ +DD ALRRG+ + + T++L GD L + A Sbjct: 61 KLETLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAYDEATAILAGDALQALA 120 Query: 118 FCMVIET-KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED-------YLHVIKSKT 169 F ++ E K+ + L++V + + +D++ D + + K KT Sbjct: 121 FEIISEPIKNIAPSQNLAMVKALANASGYSGMCGGQAMDLSATDKQIELATLIQLHKLKT 180 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 L A+E + + A + + RQAL + +G+AFQ+ DDVLD E+GK G D Sbjct: 181 GALIRCAVEFAIIAAKINDDERQALVDFADAIGLAFQVQDDVLDIIASTEELGKPQGSDT 240 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + K T P +L + + + + ++ Sbjct: 241 DSNKSTYPKLLGLEGAQQTASSLIEDALS 269 >gi|206562765|ref|YP_002233528.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315] gi|198038805|emb|CAR54767.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315] Length = 294 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 116/224 (51%), Gaps = 14/224 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLA 141 LRRGK + + T++LVGD L SQAF + + + ++ +LV + +A Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALSPVQQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--ALKSYGM 199 G+ L+ S L +T E + + KT L AA+ + +L AG S AL Y Sbjct: 154 GGQAIDLA-SVGLKLTREQLETMHRMKTGALLRAAVRMGAL-AGETPSTETMAALDVYAG 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+VDD+LD + +GK G+D N KPT IL + Sbjct: 212 AVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLE 255 >gi|21226891|ref|NP_632813.1| farnesyltranstransferase [Methanosarcina mazei Go1] gi|20905197|gb|AAM30485.1| Geranyltranstransferase [Methanosarcina mazei Go1] Length = 295 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 130/247 (52%), Gaps = 11/247 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +V+++ SGGKR+RP++ L + + + A A+E +H+A+L+HDD++D +RR Sbjct: 41 MVEHVCHSGGKRIRPIILLLVSEICSGSYSRSLNAALAVEMMHSASLIHDDLLDQGLVRR 100 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 +A +G ++L GD+L++++ I ++ ++ +AEGE+ L L + Sbjct: 101 NLPSAPEKFGPSGALLCGDYLIAKSIAF-ISPYGEKVIQDFGKAGMDMAEGEVLDLKL-E 158 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + E DY I KTA LF+ + + + G + + + +G LG A+Q+VDD+L Sbjct: 159 DESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDDIL 218 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 ++ EV E G++ + TLP I + + T +E+ KS I+ K+ V K+ Sbjct: 219 EFL-EVVE-----GKESKFTSETLPHI--YMKSTSKEEALKKS-IDCVKLHVAAAKETLE 269 Query: 273 IMRENRA 279 RE A Sbjct: 270 TFRECPA 276 >gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] Length = 297 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 118/226 (52%), Gaps = 15/226 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y + GGKR+RP+L+ A + + + A+E IH +L+HDD+ +D+ Sbjct: 36 DAMRYSVLGGGKRVRPLLSFAAGELSGADKTHATIAGAAVELIHVYSLVHDDLPCMDNDT 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-------SQEALEALSLVACT--L 140 LRRGK + + T++LVGD L S AF ++ ET E + L+ A + + Sbjct: 96 LRRGKPTCHVRYDEPTALLVGDSLQSLAFQLLTETNLTEDPHVQLEMVRHLAFAAGSRGM 155 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSYG 198 A G+ L S+ K L + E +++H+ KT L AA+ + + + + + L + Sbjct: 156 AGGQAIDLDSVGKTLSLPELEFMHI--HKTGALIRAAVILGARCGNRLDETQFKLLDHFA 213 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ++DD+LD +GK G+D N KPT IL ++ Sbjct: 214 KCMGLAFQVIDDILDTEATTAALGKTAGKDAENNKPTYVSILGIKQ 259 >gi|77919267|ref|YP_357082.1| geranyltranstransferase [Pelobacter carbinolicus DSM 2380] gi|77545350|gb|ABA88912.1| farnesyl-diphosphate synthase [Pelobacter carbinolicus DSM 2380] Length = 296 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 16/234 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y F+ GKR+RP+L +A + D + ACA+E IHT +L+HDD+ Sbjct: 35 AMRYSTFAAGKRIRPILMMAACEAVGGTVDKVMPAACAMEMIHTYSLIHDDLPAMDDDDF 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLVACTLAE------ 142 RRG+ V+G+ ++L GD LL++AF ++ + +LEA V+ +A Sbjct: 95 RRGRPTCHKVYGDALAILAGDALLTEAFILLSRLGEDGGVSLEAARRVSADIARCAGSMG 154 Query: 143 ---GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++ + S K +D+ +Y+H KT L A+++ +++ G + L Y Sbjct: 155 MVGGQVVDMDSEGKEIDLATLEYIHT--RKTGALILASVQSGAVLGGASSEQVDNLGRYA 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 G+AFQ+ DD+LD G+ +GK++G D GK T P +L R K Sbjct: 213 KAAGLAFQVADDILDIVGDQELLGKDVGSDQERGKATYPALLGLDAARDRAKEL 266 >gi|254248780|ref|ZP_04942100.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia PC184] gi|124875281|gb|EAY65271.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia PC184] Length = 294 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 116/224 (51%), Gaps = 14/224 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLA 141 LRRGK + + T++LVGD L SQAF + + + ++ +LV + +A Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALSPVQQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--ALKSYGM 199 G+ L+ S L +T E + + KT L AA+ + +L AG S AL Y Sbjct: 154 GGQAIDLA-SVGLKLTREQLETMHRMKTGALLRAAVRMGAL-AGETPSAETMAALDVYAG 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+VDD+LD + +GK G+D N KPT IL + Sbjct: 212 AVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLE 255 >gi|160915116|ref|ZP_02077329.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991] gi|158432915|gb|EDP11204.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991] Length = 280 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/233 (31%), Positives = 119/233 (51%), Gaps = 10/233 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + + Y + +GGKR+RP L + + A AIE IHT +L+HDD+ +DD Sbjct: 20 VKEAMLYSLLAGGKRIRPQLLFSALKAYGIAEEKGFPCAAAIEMIHTYSLIHDDLPAMDD 79 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQ----EALEALSLVACTL 140 LRRG+ + + T++L GD LL+QAF V++ T SQ E+L + A + Sbjct: 80 DTLRRGRPTCHIQFDEATAILAGDALLTQAFHEVLKSDATASQLVSLESLISSYSGANGM 139 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ L DV+ E V + KT L + L ++++A + + KS G Sbjct: 140 VLGQIYDLEAEGRCDVSIEALQRVHEYKTGKLITLPLLCAAVLANHEEDF-EVWKSIGYA 198 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 +G++FQ+ DDV D E+GK+I D N K T +L +R T+ + ++ Sbjct: 199 MGLSFQIQDDVFDVTSTCEELGKDIMSDAGNHKSTYVSLLGVERATQLAQEYY 251 >gi|303326969|ref|ZP_07357411.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3] gi|302862957|gb|EFL85889.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3] Length = 297 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 13/234 (5%) Query: 24 CSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 C D +P +K Y + +GGKRLRP+L L+ A + + A AIE IHT +L Sbjct: 25 CLDGRPMPPRLKESMLYSLQAGGKRLRPVLCLSCAALCGLEPQKALPFAAAIEMIHTYSL 84 Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE-------AL 130 +HDD+ LRRGK + + T++L GD LL+ AF ++ A Sbjct: 85 IHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDGLLTDAFVIMCRAPVPPDRLLRAVAE 144 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 AL+ A + G+ + + V+ E+ + KT L A+ L+AGV + Sbjct: 145 LALAAGASGMVGGQEWDMIYTGRSQVSLEELRGMHAMKTGALLRASCVCGGLLAGVDDKA 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +A+ ++G +LG+AFQ+ DD+LD + +GK G D GK T P ++ ++ Sbjct: 205 LRAISNFGSSLGVAFQIADDILDVVADTATLGKPAGSDAEQGKNTYPSLVGLEK 258 >gi|218289630|ref|ZP_03493850.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218240280|gb|EED07463.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 291 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 27/267 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y + + GKRLRP L +ATA D + A A+E IH +L+HDD+ Sbjct: 31 EAMNYSLMADGKRLRPALVIATAETFGVPRDRVLPAAAAVELIHCYSLIHDDLPCMDDDD 90 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEALSLVACTLAEGELRQL 148 LRRG+ +V+G ++L GD LL++AF ++ + A L+++ + + + Sbjct: 91 LRRGQPTNHVVFGEAMALLAGDALLTEAFHLLARPLEGVPAERQLAMIRTLASRAGVDGM 150 Query: 149 SLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + +D+ + D++H+ KTA L A +E+ A + + VR AL YG Sbjct: 151 VGGQAVDIERTGGQGTLQDVDFIHL--HKTARLIQACVEIGGYFADLDDQVRWALSCYGE 208 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 LG+AFQ++DDVLD ++GK G+D GK T P + G ++ + + I Sbjct: 209 CLGLAFQMIDDVLDVTASTEQLGKTAGKDAEEGKLTYPRFV----GVEKTRQMARDVIRR 264 Query: 260 GK-------ISVENLK--KAFIIMREN 277 G+ + E LK +A I+ R+ Sbjct: 265 GEQALAEVGVRSEPLKALQALIVERDR 291 >gi|183985063|ref|YP_001853354.1| multifunctional geranylgeranyl pyrophosphate synthetase IdsA1 [Mycobacterium marinum M] gi|183178389|gb|ACC43499.1| multifunctional geranylgeranyl pyrophosphate synthetase IdsA1 [Mycobacterium marinum M] Length = 346 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 107/205 (52%), Gaps = 3/205 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L++ A D + A A+E +H +LLHDD++D RR + AA +V+ Sbjct: 68 GKAVRPALSITCARAAGGAMDAAIPAAVAVELVHDCSLLHDDIMDGDVTRRHRPAAWVVY 127 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161 G ++L GD LL A +V E S AL +L C G+ L+ + V + Sbjct: 128 GVPMAILTGDALLVLALDLVHEGASGSALRKAALELCA---GQSADLAFEQRTKVWLPEC 184 Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 L + + KT LF A ++ +L AG + V +G +LG++FQLVDD+L G + Sbjct: 185 LQMAQQKTGALFGVACQLGALAAGADSLVADQYAQFGRHLGLSFQLVDDILGIWGSESVT 244 Query: 222 GKNIGEDFRNGKPTLPVILAFQRGT 246 GK + D ++ K +LPV+ A GT Sbjct: 245 GKPVFSDLQSRKKSLPVVAALSSGT 269 >gi|221633181|ref|YP_002522406.1| isoprenyl synthetase [Thermomicrobium roseum DSM 5159] gi|221156897|gb|ACM06024.1| isoprenyl synthetase [Thermomicrobium roseum DSM 5159] Length = 344 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 7/218 (3%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GKR RP L A A + V +A AIE +H TL+HDD+ D S LRR + +W Sbjct: 55 GKRFRPALCTAIASAVCGDAARAVGIAAAIELLHNFTLIHDDIQDRSRLRRHRPTIWALW 114 Query: 102 GNQTSVLVGD--FLLSQAFCMVI-----ETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 G+ ++ GD F+LSQ + ++ E + + A + EG++ LS + Sbjct: 115 GDAQAINAGDALFVLSQIAALEAAQALEPSRGAELVRRFNETALLIVEGQVLDLSFEQRP 174 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +V+ +YL +I+ KTA L + + +L+AG V L+ +G LG+ FQ+ DD L Sbjct: 175 EVSVNEYLTMIERKTAALIAYSAWAGALVAGAPAEVAARLERFGRALGLGFQIRDDYLGV 234 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 G+ GK G+D R K +LP++L +R ++ + Sbjct: 235 WGDPAVTGKPRGDDLRQRKKSLPIVLVLERAAASDRAW 272 >gi|182434756|ref|YP_001822475.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775273|ref|ZP_08234538.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1] gi|178463272|dbj|BAG17792.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655606|gb|EGE40452.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1] Length = 367 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 3/208 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + V A A+E +H +LLHDD++D RR + V Sbjct: 76 GGKAVRPALALLSAEAAGAPAEAGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 135 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A+ +++E + EA A L+ L +G+ + +S VT Sbjct: 136 HGPAQAILVGDALFALAYDLLLELGTVEAGRAARRLTTATRKLIDGQAQDISYEHRERVT 195 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A+ + +++ G + L++YG +LG+AFQ VDD+L G+ Sbjct: 196 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVDDLLGIWGD 255 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 256 PEATGKQTWSDLRQRKKSLPVVAALAAG 283 >gi|149377246|ref|ZP_01894993.1| geranyltranstransferase [Marinobacter algicola DG893] gi|149358434|gb|EDM46909.1| geranyltranstransferase [Marinobacter algicola DG893] Length = 299 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/267 (28%), Positives = 135/267 (50%), Gaps = 21/267 (7%) Query: 14 KVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +++ + +++C+ E + ++Y + GGKR+RP L LA A L ++ ++ AC+ Sbjct: 18 QIDAELERQLCASGQGSERLQQAMRYSVLGGGKRIRPALCLAAATALGQPRESAIVPACS 77 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E IH +L+HDD+ +D+ LRRG+ + + T++L GD L + AF + E + Sbjct: 78 LELIHAYSLIHDDLPAMDNDDLRRGRATTHIAFDEATAILAGDALQTLAFGWLAEAPGVD 137 Query: 129 ALEALSLV--------ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 L+++ +A G+ L S+ K L V + + +H + KT L +A++ + Sbjct: 138 DQVRLAMIRELATASGHQGMAGGQAIDLESVGKQLTVEQLENMH--RHKTGALIAASVRM 195 Query: 180 SSLIA-GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 +L A V AL Y LG+AFQ+ DD+LD G+ +GK G D KPT P Sbjct: 196 GALTATDVNEDQLAALTVYSQTLGLAFQVQDDLLDIEGDTTVIGKPQGSDLARSKPTYPS 255 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVE 265 ++ G +N+ + S+E Sbjct: 256 LM----GADGARNYLSQLLESALASIE 278 >gi|172062807|ref|YP_001810458.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6] gi|171995324|gb|ACB66242.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6] Length = 294 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 12/222 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLA 141 LRRGK + + T++LVGD L SQAF + + + ++ +LV + +A Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDVDALSPVQQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMN 200 G+ L+ S L +T E + + KT L AA+ + +L ++ AL Y Sbjct: 154 GGQAIDLA-SVGLKLTREQLEKMHRMKTGALLRAAVRMGALAGDTPSAETLAALDVYAAA 212 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D N KPT IL Sbjct: 213 VGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGL 254 >gi|317127634|ref|YP_004093916.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522] gi|315472582|gb|ADU29185.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522] Length = 326 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 92/300 (30%), Positives = 149/300 (49%), Gaps = 25/300 (8%) Query: 33 VVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + L+ SGGK LRP +L + + + + V +A AIE IH A+L+HDDV+DD+ R Sbjct: 38 TINNLVHSGGKLLRPAYSLLCSQIGPDSEKEKAVAVAAAIEAIHMASLVHDDVIDDADTR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----LAEGELR 146 + GN+ ++ GD+L FC+ + +Q A L T + GEL Sbjct: 98 HNHATIHTMHGNKFAIYSGDYL----FCISFQILAQHASSLAHLDFNTRGMEKILAGELD 153 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN--LGIA 204 QL+ ++ + YL + KTA LF+ + ++ G + +QA+ ++ M +G+ Sbjct: 154 QLNSRFKPSLSVKSYLSRVAGKTAQLFAISCYSGAMEGGA--TRKQAMNAWNMGHYIGMT 211 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS----TINDG 260 FQ++DD+LD++G + +GK + D + G TLP+I A Q+ K F + T ND Sbjct: 212 FQIMDDILDFKGSSHCLGKPVMSDLQQGIYTLPLIYAMQQKPNAFKPFLEKKDMLTENDL 271 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + E L + + + +AL D Y KA L LP +K+ L EV L+R Sbjct: 272 TVIAE-LIDQYKGVEKAQALAD------KYTAKALKQLSKLPSGDYKEILEEVTTKLLKR 324 >gi|15676185|ref|NP_273317.1| geranyltranstransferase [Neisseria meningitidis MC58] gi|7225485|gb|AAF40715.1| geranyltranstransferase [Neisseria meningitidis MC58] Length = 259 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 114/213 (53%), Gaps = 12/213 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y GGKRLRPML LA + + E + AIE IH +L+HDD+ +D+ +LR Sbjct: 1 MRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLR 60 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RGK + +G T++L GD L +QAF ++ A L++++ G R ++ Sbjct: 61 RGKPTCHIKYGEATALLTGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSRGMAGG 120 Query: 152 KNLDVT---------EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + +D+ + + +H +K+ A++ +A L ++ + ++ L +Y LG Sbjct: 121 QAIDLANVGKQMVQADLEQMHSLKTG-ALIRAAVLLGATACPDLSDAELSVLDAYAAKLG 179 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +AFQ++DDVLD + +GK G+D N KPT Sbjct: 180 LAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 212 >gi|330961585|gb|EGH61845.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 116 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 53/103 (51%), Positives = 68/103 (66%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L GD+ LLA Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDVRLLAAT 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113 IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL Sbjct: 73 IEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFL 115 >gi|256826840|ref|YP_003150799.1| geranylgeranyl pyrophosphate synthase [Cryptobacterium curtum DSM 15641] gi|256582983|gb|ACU94117.1| geranylgeranyl pyrophosphate synthase [Cryptobacterium curtum DSM 15641] Length = 354 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/237 (32%), Positives = 121/237 (51%), Gaps = 18/237 (7%) Query: 31 PDVVKYLI-------FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 PD+ KYL +GGKR RP++ A + D + A AIE HTA L+HDD Sbjct: 48 PDMNKYLYDPLLRYSRNGGKRHRPLICFAACRAVGGDLDRALSAAAAIEHFHTAALIHDD 107 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-------TKSQEALEALSLV 136 + D++ LRRG+ L G ++ GD LS V+E TK + E +++ Sbjct: 108 IADEAELRRGEPCLHLTEGLGLAINAGDLGLSLVNGTVMEDDALDDATKVRVVSELITMT 167 Query: 137 ACTLAEGELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFSA-ALEVSSLIAGVQNSVRQA 193 T+ EG+ + +++ D+T EDYL + KTA A L + +++ G + Sbjct: 168 RRTI-EGQALDIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAIVGGGTEGEIEG 226 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L++YG++ G+AFQ+ DD+L+ G K+ D GK TL V+ A Q T+R++ Sbjct: 227 LRNYGLDTGLAFQIQDDLLNLIGAEEATKKDFRNDITEGKRTLVVVHALQASTQRDR 283 >gi|282861046|ref|ZP_06270111.1| Dimethylallyltranstransferase [Streptomyces sp. ACTE] gi|282563704|gb|EFB69241.1| Dimethylallyltranstransferase [Streptomyces sp. ACTE] Length = 349 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 111/211 (52%), Gaps = 5/211 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L LA A L ++ + A A+E +H TLLHDDV+D+ A RR + A V+ Sbjct: 64 GKAIRPALVLAAARALGGDPESALRAAVAVELVHNFTLLHDDVIDEDATRRHRPTAWAVF 123 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALS-LVACT--LAEGELRQLSLSKN--LDV 156 G +V+ GD +L+ A ++ E + A + L AC L G+ +L + LDV Sbjct: 124 GVPDAVVTGDAVLALAQRLLAEDPHPGSARASARLSACVIELCAGQQADCALEEREPLDV 183 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T ++ L + +KT L A + +L AG +A+ +G G+AFQL+DD++ G Sbjct: 184 TLDECLTMATAKTGALLGCACALGALYAGADEPAVEAMDGFGREAGLAFQLIDDLIGIWG 243 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + GK +G D K +LPV+ A GT Sbjct: 244 DTARTGKPVGADLAAHKKSLPVVAALTSGTP 274 >gi|309379784|emb|CBX21560.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 298 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 14/232 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y + GGKRLRPML LA + + E + AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAVLDGGKRLRPMLVLAASELGEAVHEAVGQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++LVGD L +QAF ++ A Sbjct: 80 IHVYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSMGMAGGQAIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLGAMSC 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 296 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 127/258 (49%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ ++++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIH--KHKTGKLLEFAVLAGAILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTIDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + + TI + K ++ +L+ Sbjct: 261 DILEETIAEAKGAISSLQ 278 >gi|225076775|ref|ZP_03719974.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens NRL30031/H210] gi|224951873|gb|EEG33082.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens NRL30031/H210] Length = 298 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 14/216 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y+ GGKRLRP+L LA + + E + AIE +H +L+HDD+ +D+ + Sbjct: 38 EAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDS 97 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------TLA 141 LRRGK + + T++LVGD L +QAF ++ A L++++ +A Sbjct: 98 LRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRPTGLPAERQLAMLSTLAQASGSLGMA 157 Query: 142 EGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL-IAGVQNSVRQALKSYGM 199 G+ L+ + K ++ E + +H +K T L AA+ + +L + + Q L Y Sbjct: 158 GGQAIDLANVGKAMNQAELEQMHSLK--TGALIRAAVALGALSCPDLTPAQIQTLDHYAA 215 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 216 KLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPT 251 >gi|325920751|ref|ZP_08182657.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865] gi|325548803|gb|EGD19751.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865] Length = 291 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 118/231 (51%), Gaps = 32/231 (13%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +++ + GGKR+RP+L AT + + D+ A A+E IH +L+HDD+ +DD AL Sbjct: 34 AMRHAVLGGGKRMRPLLVYATGALFDADEDSLDTPAVAVELIHAYSLVHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG+ + + T++L GD L ++AF E L A S V+ L G L+ L+ Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTRAF---------ELLAAAS-VSADLRVGWLQSLAS 143 Query: 151 SK-----------NLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + ++D T + + +H +K T L AA+ + +L G ++ +Q Sbjct: 144 AAGAAGMCGGQALDIDATGQLQSLSDLERMHALK--TGALIRAAVRMGALTGGAAHADQQ 201 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 L ++ LG+AFQ+ DD+LD ++GK G+D K T P +L + Sbjct: 202 RLDAFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSKSTYPALLGME 252 >gi|239945641|ref|ZP_04697578.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] gi|239992111|ref|ZP_04712775.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 11379] Length = 356 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 3/224 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + + A A+E +H +LLHDD++D RR + V Sbjct: 65 GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 124 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A+ +++E + EA A L+ L +G+ + +S VT Sbjct: 125 HGPAQAILVGDALFALAYDLLLELGTVEAGRAARRLTTATRKLIDGQAQDISYEHRERVT 184 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A+ + +++ G + L++YG +LG+AFQ VDD+L G+ Sbjct: 185 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVDDLLGIWGD 244 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 GK D R K +LPV+ A G + + + D K Sbjct: 245 PESTGKQTWSDLRQRKKSLPVVAALAAGGEASERLGELLAADAK 288 >gi|237747173|ref|ZP_04577653.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS] gi|229378524|gb|EEO28615.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS] Length = 299 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 115/231 (49%), Gaps = 13/231 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + ++Y + GGKR+RP+L AT + A A+E IH +L+HDD+ + Sbjct: 36 EPLHQAMRYAVLDGGKRIRPLLVFATGALFGAPVAVMTQTASAVEMIHAYSLIHDDMPCM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D+ LRRGK + +G ++L GD L +QAF ++ + L A L + A G L Sbjct: 96 DNDVLRRGKPTLHVQFGEAMALLAGDALQAQAFIVLSKIDDDAKLVAERLRILSEASGSL 155 Query: 146 RQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKS 196 S+ KNL + + + +H + KT L A++ + + A + AL + Sbjct: 156 GMCGGQAIDLDSVGKNLSIDQLEQMH--RLKTGALLKASVMLGAFSAKRPDPEEITALDA 213 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 Y +G+AFQ+VDD+LD + +GK G+D + KPT +L + K Sbjct: 214 YAKAIGLAFQVVDDILDVTADTAILGKTAGKDASDHKPTYVSLLGLENAEK 264 >gi|220927127|ref|YP_002502429.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060] gi|219951734|gb|ACL62126.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060] Length = 337 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 108/219 (49%), Gaps = 18/219 (8%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 +++ + GGKRLRP LT+ TA ML + IE +H +L+HDD+ +D+ LR Sbjct: 75 MRHAVLGGGKRLRPFLTIETARMLGGPYAGALAAGSGIELVHCYSLVHDDLPAMDNDDLR 134 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE--------- 142 RGK + T++LVGD LL+ AF ++ + Q + + LA Sbjct: 135 RGKPTVHRAFDEATAILVGDALLTFAFEILADPVWQPDARVRAELVLGLARAAGLGGMVG 194 Query: 143 GELRQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G+L L NLDV + L + KT L + +++ +++ G R AL +Y Sbjct: 195 GQLLDLGAEGRFGPANLDV--DATLQLQAMKTGALLAVSVDAGAIVGGADPDQRAALLAY 252 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G LG AFQ+ DD+LD MGK G+D GK TL Sbjct: 253 GRALGQAFQVADDILDREASSEAMGKRTGKDKEAGKATL 291 >gi|239982232|ref|ZP_04704756.1| putative polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 347 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 5/212 (2%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGK +RP L LA L R + + A A+E H TLLHDDV+D RR + A Sbjct: 61 NGGKAVRPALVLAAVHALGGRPERALRSAAAVELTHNFTLLHDDVIDRDRTRRHRPTAWT 120 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CT--LAEGELRQLSLS--KNL 154 V+G+ ++L GD L S A + E A A++ +A C L G+ +L Sbjct: 121 VFGDADAILAGDALQSLAQQWLAEDPHPRAGAAVARLARCVIELCAGQHTDCALEDRAPT 180 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +V+ ++ L + +SKT L A + +L A + AL ++G G+AFQL+DD++ Sbjct: 181 EVSLDECLTMAESKTGALLGCACALGALHADAEPDQVNALDAFGREAGLAFQLIDDIIGI 240 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 G+ + GK G D K +LPV+ A GT Sbjct: 241 WGDPSRTGKPAGADLTARKKSLPVVAALTSGT 272 >gi|224108643|ref|XP_002314919.1| predicted protein [Populus trichocarpa] gi|222863959|gb|EEF01090.1| predicted protein [Populus trichocarpa] Length = 383 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 101/323 (31%), Positives = 148/323 (45%), Gaps = 55/323 (17%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATAL---MLEY---------RGDNHVL 66 + ++V + +Y G GKR RP +L +ATAL +LE RG L Sbjct: 78 VIAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRILETTTSGVETTTRGVGDAL 137 Query: 67 ----------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 +A E IH A+LLHDDV+DD+ RRG + V GN+ +VL GDFLLS+ Sbjct: 138 TTELRKRQQSVAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVAVLAGDFLLSR 197 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 A C+ + S + E C++ E Y+ KTA L S + Sbjct: 198 A-CVAL--ASLKNTEDDWCCYCSM------------------EYYMQKTYYKTASLISNS 236 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + +L+AG V YG NLG+A+QL+DDVLD+ G +GK D R+G T Sbjct: 237 CKAIALLAGQTTEVAMLAFEYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIVTA 296 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 P++ A + E +S I+ G EN+ A + ++R + T A + A Sbjct: 297 PILFAME-----EFPQLRSVIDWGFDKPENIDVALEYLGKSRGIQRTRELAAKHANLAAA 351 Query: 297 SLRCLP---DSSWKKSLMEVVDF 316 ++ LP D +KS +VD Sbjct: 352 AIDSLPETDDEEVRKSRRALVDL 374 >gi|261492167|ref|ZP_05988738.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495736|ref|ZP_05992178.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308591|gb|EEY09852.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312240|gb|EEY13372.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 297 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 88/294 (29%), Positives = 147/294 (50%), Gaps = 26/294 (8%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 DLT +FL K +D P + + Y + GGKR+RP L AT ML + Sbjct: 8 DLTHLQQRINHFLAEKLKTTDSVGSPLVEAMAYAVLLGGKRVRPFLIYATGRMLGVPLEK 67 Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 A A+E IH +L+HDD+ +DD LRRGK + + T++L GD L S AF ++ Sbjct: 68 LDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPTCHIAFDEATAILAGDALQSFAFELL 127 Query: 122 IE----TKSQEALEALSLVACTLAEGELRQLSL---SKNLDVTEEDYLHVIKSKT-AVLF 173 T ++ + L + A+G SL ++N V+ E+ + ++KT A++ Sbjct: 128 ATDPHLTDREKVAQVTELATASGAKGMCLGQSLDLIAENKAVSLEELELIHRNKTGALIL 187 Query: 174 SAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 S+ + +L QN +++Q L +Y +G+AFQ+ DD+LD G+ +++GK +G D Sbjct: 188 SSVMMGLNLSEHSQNLAIKQPLVNYAKAIGLAFQVQDDILDVIGDTDKIGKTVGSDEHLN 247 Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK---------KAFIIMREN 277 K T P +L ++ + +++ ++ S+E L FI+ REN Sbjct: 248 KSTYPKLLGLDGAKQKAEMLYQTALH----SLEQLPFDTTALKELANFIVKREN 297 >gi|116753666|ref|YP_842784.1| polyprenyl synthetase [Methanosaeta thermophila PT] gi|116665117|gb|ABK14144.1| Polyprenyl synthetase [Methanosaeta thermophila PT] Length = 289 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 117/218 (53%), Gaps = 11/218 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + +V++Y++ S GKR+RP++ L ++ + A A+E H A+L+HDD++D Sbjct: 27 VGEVIEYVLMSPGKRVRPLILLFSSEAFGCDPRYALNAALAVELAHAASLIHDDILDCGV 86 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG +A +G + S+L GD+L+S + + I + + A+ S +AEGE+ LS Sbjct: 87 ERRGAPSAFRRFGMEASLLAGDYLISMSIGL-ISSYGEPAIRLFSKACMDMAEGEIIDLS 145 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + ++Y I KTA LF+A+ + +IAG + + YG+ LG+A+Q+VD Sbjct: 146 RI----ASPQEYYQCITKKTASLFAASARLGCMIAGADREDQILYERYGLELGLAYQIVD 201 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 D+ + +G + G+ TLP I A + G + Sbjct: 202 DLEEL------IGIDQGKRSTKKSMTLPRIYALRSGPE 233 >gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum ATCC 824] gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum ATCC 824] gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum EA 2018] Length = 289 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 118/222 (53%), Gaps = 13/222 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 + Y + +GGKR+RP+L LA+ + + +A AIE IHT +L+HDD+ +D+ LR Sbjct: 32 MNYSLNAGGKRVRPLLLLASYAIYNKDYKEVIDIAAAIEMIHTYSLIHDDLPCMDNDDLR 91 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVA-CTLAEGELRQ 147 RG+ ++G ++L GD LL++A ++ + K +EAL+A +++ ++G + Sbjct: 92 RGRPTNHKIFGYSIALLAGDGLLNEAMNIMFKYCIGKGEEALKACLMISKAASSDGMIGG 151 Query: 148 -----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 LS K ++ E Y+H K KT L AA+ +++ G + L YG LG Sbjct: 152 QVVDILSEGKKINEDELRYMH--KKKTGELIKAAVVSGAILGGAPLHDVELLSQYGDKLG 209 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +AFQ+ DD+LD G+ MGK D N K T + + Sbjct: 210 LAFQIEDDILDIIGDTKIMGKTSKSDLENDKCTYVTLYGIDK 251 >gi|300709739|ref|YP_003735553.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3] gi|299123422|gb|ADJ13761.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3] Length = 280 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 121/230 (52%), Gaps = 10/230 (4%) Query: 12 MEKVNFLILKRICSDVEMI-PD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 +E+ L+ +R+ S V + PD V + SGGKR+RP +T+ + D+ V Sbjct: 4 LERRRALVDERLESVVGSVEPDGLAEEVGHTALSGGKRVRPTVTVLVCEAVGGEPDDAVG 63 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 IE +H A+L+ DD++D SA+RRG +A +G +++ D L +AF + + Sbjct: 64 FGVGIELVHNASLVIDDIIDRSAMRRGVESAWTRYGYGPAIVGSDAQLGEAFALF--SSD 121 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A +A++ L EGE +L TE +Y+ + + KT LF AA E+ ++ A Sbjct: 122 PRATQAVTEAMVELGEGEATELVARPE---TEAEYMELARRKTGALFRAAAELGAIAADA 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +A+ Y +GIAFQ+ DDVLD + +++GK G+D +P+L Sbjct: 179 DAVTVEAVGEYAERVGIAFQIRDDVLDATADADDLGKPTGQDDEMERPSL 228 >gi|291449099|ref|ZP_06588489.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] gi|291352046|gb|EFE78950.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] Length = 367 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 3/208 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + + A A+E +H +LLHDD++D RR + V Sbjct: 76 GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 135 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A+ +++E + EA A L+ L +G+ + +S VT Sbjct: 136 HGPAQAILVGDALFALAYDLLLELGTVEAGRAARRLTTATRKLIDGQAQDISYEHRERVT 195 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A+ + +++ G + L++YG +LG+AFQ VDD+L G+ Sbjct: 196 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVDDLLGIWGD 255 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 256 PESTGKQTWSDLRQRKKSLPVVAALAAG 283 >gi|170691118|ref|ZP_02882284.1| Polyprenyl synthetase [Burkholderia graminis C4D1M] gi|170144367|gb|EDT12529.1| Polyprenyl synthetase [Burkholderia graminis C4D1M] Length = 293 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 15/223 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + R + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL- 148 LRRGK + + T++LVGD L SQAF + A +A + LA G + Sbjct: 94 LRRGKPTVHVKYDEATALLVGDALQSQAFVSLTSDVLAPAQQAALVRELALASGSIGMCG 153 Query: 149 -------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI--AGVQNSVRQALKSYGM 199 S+ L + + +H + KT L AA+ + +L A N++R +L +Y Sbjct: 154 GQAIDLASVGHTLTRAQLETMH--RMKTGALLRAAVRMGALAGEAPDANAMR-SLDAYSA 210 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D ++GKPT I+ Sbjct: 211 AVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGL 253 >gi|212715644|ref|ZP_03323772.1| hypothetical protein BIFCAT_00544 [Bifidobacterium catenulatum DSM 16992] gi|212661011|gb|EEB21586.1| hypothetical protein BIFCAT_00544 [Bifidobacterium catenulatum DSM 16992] Length = 394 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 101/322 (31%), Positives = 157/322 (48%), Gaps = 41/322 (12%) Query: 23 ICSDVEMIPDVVKYLIFS---GGKRLRPMLTL------ATALMLEYRGDNHVLLACAIEF 73 + S + I D+V + GGKRLR +LTL A+ +LE D + LACA+E Sbjct: 62 VASSCKPIADMVAMQAVTSSEGGKRLRALLTLDSFRAFASEDVLERDFDALLDLACAVEV 121 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDFLLSQAFCMVIET 124 T L+HDD++DDS LRRGK +A + G+ +++GD L + + + I Sbjct: 122 FQTGALVHDDIIDDSDLRRGKPSAHRAFSTDTHSETIGHGLGIMLGDMLATAS--VDIAD 179 Query: 125 KSQEALEALSLVACTLAE-------GELRQLSLSKNL--DVTE--EDYLHVIKSKTAVLF 173 K+ L S V L G++ L++ N D E E L+V + KTA Sbjct: 180 KAASKLTYGSNVVAALLNMHREVEVGQVLDLAVELNPLNDPNELVEASLNVFRWKTASYT 239 Query: 174 S-AALEVSSLIAGV-QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + A LE L AG+ ++ R+ + G+ LG+AFQL DD+LD G GK +G D R Sbjct: 240 TIAPLEFGMLAAGLSKDDARRHALAVGLPLGLAFQLADDLLDVVGSSRNTGKPVGGDIRE 299 Query: 232 GKPTL---PVILAFQRGTKRE-KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287 GK T+ I A G +RE + W++ D + S +++A + R+ A+ + R Sbjct: 300 GKRTVLLADAINAADDGQRRELIDMWEA---DSR-SETQVQRAIELFRQTGAIAQSRNRI 355 Query: 288 YSYGQKAKDSLRCLPDSSWKKS 309 +K ++ L S ++KS Sbjct: 356 ADLWHASKSAINALDLSEYRKS 377 >gi|307726551|ref|YP_003909764.1| polyprenyl synthetase [Burkholderia sp. CCGE1003] gi|307587076|gb|ADN60473.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003] Length = 293 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 121/223 (54%), Gaps = 15/223 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + R + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIETKSQEALE---ALSLVACTLAE 142 LRRGK + + T++LVGD L SQAF V+ Q AL AL+ + + Sbjct: 94 LRRGKPTVHVKYDEATALLVGDALQSQAFVSLTSDVLAPAQQAALVRELALASGSVGMCG 153 Query: 143 GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI--AGVQNSVRQALKSYGM 199 G+ L S+ L + + +H + KT L AA+ + +L A N++R +L +Y Sbjct: 154 GQAIDLASVGHTLTRAQLETMH--RMKTGALLRAAVRMGALAGEAPDANAMR-SLDAYSA 210 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D ++GKPT I+ Sbjct: 211 AVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGL 253 >gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays] gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays] Length = 361 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 125/249 (50%), Gaps = 27/249 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D ++Y + +GGKR+RP L LA ++ + A A+E +HT +L+HDD+ Sbjct: 91 DAMRYALLAGGKRVRPALCLAACAVVGGPESWAMPAAAAVEMVHTMSLVHDDLPCMDDDD 150 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----------ETKSQEALEALS-LVA 137 LRRGK +V+G +VL GD LLS +F + E + A+ L Sbjct: 151 LRRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPAVDPEKHPARVVRAIGELAR 210 Query: 138 CTLAEG-------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 C +EG +L S+ + + +Y+H+ KTA L A++ + ++I G + Sbjct: 211 CIGSEGLVAGQVVDLEMTGTSQTVPLELLEYIHL--HKTAALLEASVVIGAIIGGGTDEQ 268 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL+ Y ++G+ FQ+VDD+LD E+GK G+D + K T P +L G + + Sbjct: 269 IEALRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLL----GLAKSR 324 Query: 251 NFWKSTIND 259 F + ++D Sbjct: 325 EFAEKLVSD 333 >gi|298528183|ref|ZP_07015587.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298511835|gb|EFI35737.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 298 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 20/239 (8%) Query: 24 CSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 C E +P ++Y + +GGKR+RP+L LA M + + A +E IHT +L Sbjct: 23 CLQFEGVPGELQQAMEYSLMAGGKRVRPVLCLAWGEMTGACTKDILPFASGLEMIHTYSL 82 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSL 135 +HDD+ +D+ LRRGK + +G ++L GD LL+QAF M+++T ++ L A Sbjct: 83 VHDDLPAMDNDDLRRGKPTSHKKFGEALAILAGDGLLTQAFAMMLKTSFPAENVLAAAGT 142 Query: 136 V-----ACTLAEGELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV-Q 187 V + G+ + + +++++ + +H +K T L AA +++AG Sbjct: 143 VAQAAGPAGMVGGQCIDMRATGRESMELVDLKGMHAMK--TGALLRAACCSGAILAGSDP 200 Query: 188 NSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + R L +Y G N+G+AFQ+VDD+LD G+ +GK +G D K T P L ++ Sbjct: 201 ENGRDTLNAYNYGSNIGLAFQIVDDILDVTGDEKSLGKPVGSDESVNKSTYPRFLGLEK 259 >gi|170699439|ref|ZP_02890483.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10] gi|170135639|gb|EDT03923.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10] Length = 294 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 12/222 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLA 141 LRRGK + + T++LVGD L SQAF + + + ++ +LV + +A Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDVDALSPVQQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMN 200 G+ L+ S L +T E + + KT L AA+ + +L ++ AL Y Sbjct: 154 GGQAIDLA-SVGLKLTREQLETMHRMKTGALLRAAVRMGALAGDTPSAETLAALDVYAAA 212 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D N KPT IL Sbjct: 213 VGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGL 254 >gi|93278762|pdb|2AZL|A Chain A, Crystal Structure For The Mutant F117e Of Thermotoga Maritima Octaprenyl Pyrophosphate Synthase Length = 299 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 108/184 (58%), Gaps = 5/184 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ + A+E +H A+LLHDDV+D + RRGK ++G++ +V GD +L A Sbjct: 60 GEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAEHT 119 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V E + + A V ++E EL + LS+ +T+E+YL +++ K+ LF AL++ Sbjct: 120 VEEIGNNKLRRAFLNVIGKMSEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLP 178 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+ G + + L + G+ +G +Q+ DD++D+ G + ++GK+ D +NG + P++ Sbjct: 179 ALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVT 234 Query: 241 AFQR 244 A ++ Sbjct: 235 AMEK 238 >gi|332673082|gb|AEE69899.1| polyprenyl synthetase [Helicobacter pylori 83] Length = 307 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 141/265 (53%), Gaps = 18/265 (6%) Query: 42 GKRLRPMLTLATALMLEYRGD----NHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L + D + VL CAI E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLNEKTDAILLDKVLNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K E + +ALS L+ GE+ + + + + Sbjct: 92 INALFGNFNAVMLGDVFYSKAFFEL--SKMGELIAKALSNAVLRLSRGEIEDVFVGECFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ N + +G+N G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFIEASLKSMAILL---NKDAKMYADFGLNFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAFIIM 274 + +GK DF+ GK TLP +L +++ + ++ S D +E K+ F Sbjct: 207 QDAKTLGKPNFSDFKEGKTTLPYLLLYEKLNQHDQGLLISYFKQDSHEIIEWTKEKF--- 263 Query: 275 RENRALVDTEYRAYSYGQKAKDSLR 299 ++ + +T A Y +KA ++++ Sbjct: 264 KQYGIIEETLKTAQVYSKKALEAIK 288 >gi|301166926|emb|CBW26505.1| putative octaprenyl-diphosphate synthase [Bacteriovorax marinus SJ] Length = 325 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 6/212 (2%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL- 66 TLK ++ ++ I CS + + ++++ + GGKRLRP+LT + Y D L Sbjct: 13 TLKHVKDMDLNISSNNCS--KAVNELLQNSVLVGGKRLRPLLTYLVGHL--YGVDFKTLD 68 Query: 67 -LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A +IE +H A+L HDDV+D++ RRG + + N+ +VL GD+LLS + Sbjct: 69 PYAKSIELVHAASLSHDDVIDNATTRRGVASINIQASNKKAVLAGDYLLSDVIVNLTNAG 128 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + E + ++ V LA GE Q + D T E + KTA + S +++AG Sbjct: 129 NLELVGEMAKVIQDLAIGEWIQADAIETRDYTSELIEEIAIKKTASVMSWCCYAPAILAG 188 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + S + K G++LGIAFQL+DD LD+ E Sbjct: 189 LSRSTIEKSKQMGIDLGIAFQLMDDTLDFSSE 220 >gi|229086753|ref|ZP_04218919.1| Geranyltranstransferase [Bacillus cereus Rock3-44] gi|228696574|gb|EEL49393.1| Geranyltranstransferase [Bacillus cereus Rock3-44] Length = 297 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 86/259 (33%), Positives = 126/259 (48%), Gaps = 31/259 (11%) Query: 31 PDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 P+V++ Y + +GGKRLRP+L AT E + + ACA+E IHT +L+HDD+ Sbjct: 31 PNVLREAMIYSLEAGGKRLRPLLLFATLQAFEKERELGIGAACALEMIHTYSLIHDDLPC 90 Query: 87 DSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---------ETKSQEALE---- 131 LRRGK V+G +VL GD LL+ AF V ETK + ALE Sbjct: 91 MDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQAVTAYDHQDVQAETKLRLALELAKA 150 Query: 132 --ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +VA +A+ E K L+ +Y+H K KT L A+ +++AG Sbjct: 151 AGPEGMVAGQVADMEAE----GKRLEREGLEYIH--KHKTGRLLEYAVLAGAILAGATPE 204 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + Sbjct: 205 QEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTIDEA---- 260 Query: 250 KNFWKSTINDGKISVENLK 268 K + TI K ++ +L+ Sbjct: 261 KCILEETIGKAKDAIASLQ 279 >gi|315586238|gb|ADU40619.1| polyprenyl synthetase [Helicobacter pylori 35A] Length = 307 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 141/265 (53%), Gaps = 18/265 (6%) Query: 42 GKRLRPMLTLATALMLEYRGD----NHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L+ + D + L CAI E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLDEKTDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K E + +ALS L+ GE+ + + + + Sbjct: 92 INALFGNFNAVILGDVFYSKAFFEL--SKMGELIAKALSNAVLRLSRGEIEDVFVGECFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ N + +G+N G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFIEASLKSMAILL---NKDAKIYADFGLNFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAFIIM 274 + +GK DF+ GK TLP +L +++ + E+ S D +E K+ F Sbjct: 207 QDAKTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQGLLISYFKQDSHEIIEWTKEKF--- 263 Query: 275 RENRALVDTEYRAYSYGQKAKDSLR 299 ++ + +T A Y +KA ++++ Sbjct: 264 KQYGIIEETLKTAQVYSKKALEAIK 288 >gi|291454079|ref|ZP_06593469.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291357028|gb|EFE83930.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 383 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 5/212 (2%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGK +RP L LA L R + + A A+E H TLLHDDV+D RR + A Sbjct: 97 NGGKAVRPALVLAAVHALGGRPERALRSAAAVELTHNFTLLHDDVIDRDRTRRHRPTAWT 156 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CT--LAEGELRQLSLSKN--L 154 V+G+ ++L GD L S A + E A A++ +A C L G+ +L Sbjct: 157 VFGDADAILAGDALQSLAQQWLAEDPHPRAGAAVARLARCVIELCAGQHTDCALEDRAPT 216 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +V+ ++ L + +SKT L A + +L A + AL ++G G+AFQL+DD++ Sbjct: 217 EVSLDECLTMAESKTGALLGCACALGALHADAEPDQVNALDAFGREAGLAFQLIDDIIGI 276 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 G+ + GK G D K +LPV+ A GT Sbjct: 277 WGDPSRTGKPAGADLTARKKSLPVVAALTSGT 308 >gi|149199615|ref|ZP_01876648.1| Trans-hexaprenyltranstransferase [Lentisphaera araneosa HTCC2155] gi|149137268|gb|EDM25688.1| Trans-hexaprenyltranstransferase [Lentisphaera araneosa HTCC2155] Length = 326 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 5/237 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +E+ N LI + S D+ L S GK+LRP+L T L + + LA Sbjct: 20 LEECNELIQDTLKSSAPQTSDLAITLKKSRGKQLRPLLVF-TILGQQTSANK---LAAVC 75 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IH A+L+HDD++DD LRR + N ++L+GD + + F + S E Sbjct: 76 ESIHCASLVHDDIIDDCRLRRNLPTMNSIHDNSIALLLGDLMFTSIFTLSSCLPSWVTSE 135 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + + TL EGEL Q + ++ VT++ YL V++ KT L S + +S +A Sbjct: 136 SAQTIK-TLIEGELLQQTYKCDIAVTKDQYLDVLQKKTGALLSFCTKAASRLADKNPDDV 194 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 Q Y G+ FQ+ DD D+ E K+ G D NG TLP IL + K Sbjct: 195 QLAGEYANTFGLIFQIADDWADFVKAGTEDNKDRGADIGNGFVTLPWILMLEHAPKE 251 >gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134] gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842] gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222] gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407] gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185] gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2] gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W] gi|74489206|gb|EAO52676.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134] gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842] gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W] gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2] gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185] gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407] gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222] gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis CT-43] Length = 296 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 127/258 (49%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ ++++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIH--KHKTGKLLEFAVLAGAILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + + TI + K ++ +L+ Sbjct: 261 DILEETIAEAKGAISSLQ 278 >gi|134101179|ref|YP_001106840.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291004002|ref|ZP_06561975.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133913802|emb|CAM03915.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 335 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 13/235 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVV 85 E + ++ +Y + S GK LRP++ +A+A + GD ++ A A+E++H A+L+HDD++ Sbjct: 32 EPLDEISRYALLSPGKLLRPLMLVASAEAVG--GDREAVMPAALAVEYLHAASLVHDDII 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTL 140 D RRG+ + +G +++ GD L+ + F C V + A+ L+ L Sbjct: 90 DGDDTRRGRASVHARYGVADAIITGDALIIRLFGSLAECPVPDADVLSAVRILARAGDDL 149 Query: 141 AEGELRQLSL----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 G++R+ L L YL + KT LF A + +++ G + Sbjct: 150 CRGQMREALLVPPAPGALGSGLAAYLGMAALKTGALFRGACQAGAVLGGGTPGEVGIVAE 209 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + + G+AFQ+ DD+L + G+ GK D N +PT PV+LA + G E+ Sbjct: 210 FAEHTGLAFQMYDDLLPFLGDPAVTGKPDTSDVSNLRPTFPVLLAHREGGPAERR 264 >gi|325518120|gb|EGC97906.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49] Length = 294 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 12/222 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLA 141 LRRGK + + T++LVGD L SQAF + + + ++ +LV + +A Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAAALSPVQQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMN 200 G+ L+ S L +T E + + KT L AA+ + +L ++ AL Y Sbjct: 154 GGQAIDLA-SVGLKLTREQLETMHRMKTGALLRAAVRMGALAGDTPSADAMAALDVYAGA 212 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D N KPT IL Sbjct: 213 VGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGL 254 >gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987] gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97] gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187] gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26] gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987] gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97] gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187] gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26] Length = 296 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 83/258 (32%), Positives = 125/258 (48%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ S+++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIH--KHKTGKLLEFAVLAGSILSNATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L + +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + + TI K ++ +L+ Sbjct: 261 DILEETIAKAKDAISSLQ 278 >gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804] gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii] Length = 303 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 14/218 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL------LACAIEFIHTATLLHDDV- 84 + ++Y + GGKR+R L A G + A A+E IH +L+HDD+ Sbjct: 39 EAMRYAVLGGGKRIRAALVYAAGQACPVNGSAVAIQASMDRAAAAVELIHAYSLIHDDLP 98 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLVAC 138 +DD LRRG+ + + T++L GD L AF ++ + AL +AL+ A Sbjct: 99 CMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFELLADMPIAPALVVQATQALARAAG 158 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 +L + + L D L + S KT + + ++ + +++G +S RQAL Y Sbjct: 159 SLGMAGGQAIDLHSVGQALSRDELQTMHSMKTGAMLACSVALGGIVSGASSSTRQALDDY 218 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +G+AFQ+VDD+LD + +GK G+D KPT Sbjct: 219 AQAVGLAFQVVDDILDVTADSASLGKTPGKDAAGNKPT 256 >gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera] Length = 308 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 117/224 (52%), Gaps = 15/224 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + +GGKR+RP+L +A ++ + ACA+E IHT +L+HDD+ +D+ LR Sbjct: 48 MRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLR 107 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLVACT-----LAE 142 RGK V+G ++L GD LL+ AF + + A+ +A + L Sbjct: 108 RGKPTNHKVFGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVA 167 Query: 143 GELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ + DV E +Y+HV KTA L A+ + +++ G N + L+ + Sbjct: 168 GQVVDICSEGLKDVGLEHLEYIHV--HKTAALLEGAVVLGAILGGGSNEEIEKLRKFARC 225 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+ FQ+VDD+LD E+GK G+D K T P +L ++ Sbjct: 226 IGLLFQVVDDILDVTKSSQELGKTAGKDLVADKLTYPKLLGIEK 269 >gi|323464391|gb|ADX76544.1| geranyltranstransferase [Staphylococcus pseudintermedius ED99] Length = 296 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 27/234 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y + +GGKR+RP+L LAT ML+++ ++ + +A A+E IHT +L+HDD+ L Sbjct: 36 MRYSLEAGGKRIRPLLMLATIKMLDHQKLESGMHVALALEMIHTYSLIHDDLPAMDDDDL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAF--------------CMVIETKSQEALEALSLV 136 RRGK V+G ++L GD LL++AF +IE SQ + + Sbjct: 96 RRGKPTNHTVYGEWLAILAGDALLTKAFEKIALTPHIDAQIKVALIEKISQASGHQGMVG 155 Query: 137 ACTL-AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 TL + E +Q+SL K E ++H KT L A+E +++I ++ + Q L Sbjct: 156 GQTLDMQSENQQISLEK----LESIHIH----KTGALIQFAIEAATIITSIRQTTAQQLI 207 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + +LG+ FQ+ DD+LD G ++GK +G D N K T +L ++G ++E Sbjct: 208 QFSQHLGVIFQIKDDLLDVYGNEAKLGKPVGSDVTNHKSTYVTLLG-EKGAEQE 260 >gi|208434187|ref|YP_002265853.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori G27] gi|208432116|gb|ACI26987.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori G27] Length = 307 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 120/215 (55%), Gaps = 14/215 (6%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L+ + D +L L +E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLDEKTDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATIRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K E++ + LS L+ GE+ + + ++ + Sbjct: 92 INALFGNFNAVMLGDVFYSKAFFEL--SKMGESIAQILSNAVLRLSRGEIEDVFVGESFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ N + +G+N G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFIEASLKSMAILL---NKDAKMYADFGLNFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +GK DF+ GK TLP +L +++ + E+ Sbjct: 207 QDAKTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQ 241 >gi|162448166|ref|YP_001621298.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A] gi|161986273|gb|ABX81922.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A] Length = 278 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 32/261 (12%) Query: 19 ILKRICSDVEMIPD-----VVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACA 70 I R+ + +E +P+ + Y + GGKR+RPML + +LE +G + ++ A Sbjct: 4 IENRLKAYIETLPESKLKAAMAYALLGGGKRIRPMLGMT---LLESKGVDPTPYIEAFLA 60 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E IHT +L+HDD+ +DD LRRGK + + ++L GD LL+ +F +V + K Sbjct: 61 VEMIHTYSLIHDDLPAMDDDTLRRGKPTVHIAFDEAIAILAGDALLTDSFRLVTQNKYLS 120 Query: 129 ALEALSLV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 L+ + ++ + + G+++ + S++ VT ED + + KTA L A+L Sbjct: 121 TLQKVEIIDIISSKAGSTGMVFGQIKDIE-SEDKMVTIEDLNLMYELKTANLIQASL--- 176 Query: 181 SLIAGVQNSVRQALKSY---GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +IAGV S +KSY G +G+ FQ+ DD+L+Y E GK+ +D RN KPT Sbjct: 177 -MIAGVILS-DHDIKSYEDLGYYIGLIFQIQDDILEYTLSPEEFGKSKSDDIRN-KPTYV 233 Query: 238 VILAFQRGTKREKNFWKSTIN 258 +L + + N + T+N Sbjct: 234 SLLGLDKANQV-LNTYVDTLN 253 >gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp. lyrata] gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp. lyrata] Length = 372 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 81/252 (32%), Positives = 127/252 (50%), Gaps = 21/252 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I ++Y I +GGKR+RP+L LA ++ + ACA+E IHT +L+ DD+ +D+ Sbjct: 108 IHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDN 167 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALE-----ALSLVACTL 140 LRRGK V+G ++L G LL+ AF + E S++ + A S+ L Sbjct: 168 DDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRVVKELAKSIGTKGL 227 Query: 141 AEGELRQLS---LSKNLDVTEED--YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G+ LS L N DV ED Y+HV KT L A+ + ++I G + ++ Sbjct: 228 VAGQAMDLSSEGLDPN-DVGLEDLEYIHV--HKTGALLEASAVIGAVIGGGSEEEIEKVR 284 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + +G+ FQ+VDD+LD E+GK G+D GK T P ++ G ++ K F K Sbjct: 285 YFARCIGLLFQVVDDILDETKSSEELGKTAGKDQVAGKLTYPKVM----GLEKSKEFVKK 340 Query: 256 TINDGKISVENL 267 + K ++ Sbjct: 341 LKREAKEHIQGF 352 >gi|258511741|ref|YP_003185175.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478467|gb|ACV58786.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 291 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 23/265 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y + + GKRLRP L +ATA D + A A+E IH +L+HDD+ Sbjct: 31 EAMNYSLMADGKRLRPALVIATAETFGVPRDRVLPAAAAVELIHCYSLIHDDLPCMDDDD 90 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEALSLVACTLAEGELRQL 148 LRRG+ +V+G ++L GD LL++AF ++ + A L+++ + + + Sbjct: 91 LRRGQPTNHVVFGEAMALLAGDALLTEAFHLLARPLEGVPAERQLAMIRTLASRAGVDGM 150 Query: 149 SLSKNLDV-------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + +D+ T +D + KTA L A +E+ A + + VR AL YG L Sbjct: 151 VGGQAVDIERTGGQGTLQDVEFIHLHKTARLIQACVEIGGYFADLDDQVRWALSCYGECL 210 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G+AFQ++DDVLD ++GK G+D GK T P + G ++ + + I G+ Sbjct: 211 GLAFQMIDDVLDVTASTEQLGKTAGKDVEEGKLTYPRFV----GVEKTRQMARDVIRRGE 266 Query: 262 -------ISVENLK--KAFIIMREN 277 + E LK +A I+ R+ Sbjct: 267 QALAEVGVRSEPLKALQALIVERDR 291 >gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264] gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4] gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24] gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550] gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171] gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264] gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550] gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24] gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4] gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171] Length = 296 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 127/258 (49%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ ++++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIH--KHKTGKLLEFAVLAGAILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + + TI + K ++ +L+ Sbjct: 261 DILEETIAEAKGAISSLQ 278 >gi|255065407|ref|ZP_05317262.1| geranyltranstransferase [Neisseria sicca ATCC 29256] gi|255050232|gb|EET45696.1| geranyltranstransferase [Neisseria sicca ATCC 29256] Length = 298 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 128/243 (52%), Gaps = 20/243 (8%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R +P + ++Y+ GGKRLRP+L LA + + + + AIE Sbjct: 20 LLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 +H +L+HDD+ +D+ +LRRGK + + T++LVGD L +QAF ++ A Sbjct: 80 VHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRPTGLPAER 139 Query: 132 ALSLVAC--------TLAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +++++ +A G+ L+ + K ++ + + +H +K+ T L AA+ + +L Sbjct: 140 QIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGT--LIRAAVVLGAL 197 Query: 183 IAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 N VR L +Y LG+AFQ++DDVLD + +GK G+D N KPT ++ Sbjct: 198 ACPDLDSNDVR-TLDNYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLM 256 Query: 241 AFQ 243 Q Sbjct: 257 GLQ 259 >gi|209879225|ref|XP_002141053.1| hexaprenyl pyrophosphate synthetase [Cryptosporidium muris RN66] gi|209556659|gb|EEA06704.1| hexaprenyl pyrophosphate synthetase, putative [Cryptosporidium muris RN66] Length = 505 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 52/266 (19%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGD---------------NHVLLACAIEFIHT 76 +V+ Y+ GK RP L L + + + +L A+E IH Sbjct: 160 NVINYISEIPGKLTRPELCFLIFLCMNNSSNEISIESLKSEIQLNSSQRILIKALEMIHI 219 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+LLHDD+VD+S +RRGK + L +GN+ ++L GDFL S+A V ++ A++ +SL+ Sbjct: 220 ASLLHDDIVDESDIRRGKTSTHLKFGNKIAILTGDFLFSRACHSVAFLENINAMKHVSLI 279 Query: 137 ACTLAEGELRQLS--------LSKNLDVTE----------------EDYLHVIKSKTAVL 172 L GEL Q + + +NLD + ++YL I KTA L Sbjct: 280 VEGLVRGELLQYNDLREFLDEIKENLDEMKNQNSTTTQIDIFNKYMKNYLSKIYYKTASL 339 Query: 173 FSAALEVSSLIAGVQNSV-----------RQALKSYGMNLGIAFQLVDDVLD-YRGEVNE 220 S + + G+Q S ++ + + G+N GIAFQL+DD+LD E N+ Sbjct: 340 MSHGVSACVEVNGMQQSSNLIGNELFNIKKKTIFNIGLNFGIAFQLLDDLLDIINPEANK 399 Query: 221 -MGKNIGEDFRNGKPTLPVILAFQRG 245 + K I +D G T+P + A Q Sbjct: 400 VLNKPIMKDIIQGVLTVPTLFAIQEA 425 >gi|221310351|ref|ZP_03592198.1| hypothetical protein Bsubs1_13321 [Bacillus subtilis subsp. subtilis str. 168] gi|221314675|ref|ZP_03596480.1| hypothetical protein BsubsN3_13242 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319598|ref|ZP_03600892.1| hypothetical protein BsubsJ_13163 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323874|ref|ZP_03605168.1| hypothetical protein BsubsS_13292 [Bacillus subtilis subsp. subtilis str. SMY] gi|255767538|ref|NP_390308.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str. 168] gi|321311912|ref|YP_004204199.1| geranyltranstransferase [Bacillus subtilis BSn5] gi|251757288|sp|P54383|ISPA_BACSU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|225185166|emb|CAB14359.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str. 168] gi|291484870|dbj|BAI85945.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto BEST195] gi|320018186|gb|ADV93172.1| geranyltranstransferase [Bacillus subtilis BSn5] Length = 296 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 123/230 (53%), Gaps = 17/230 (7%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 +PD +K Y + +GGKRLRP++ LA + + + CA+E IHT +L+HDD+ Sbjct: 29 MPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLP 88 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALSLV----- 136 LRRGK V+G T+VL GD LL+++F ++ S E A + L LV Sbjct: 89 CMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELIS 148 Query: 137 -ACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 A T + G++ + ++N VT E+ + + KTA L + +++A + Sbjct: 149 AAGTEGMVGGQVADME-AENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIET 207 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 L+++ ++GI FQ+ DD+LD G ++GK +G D N K T P +L+ + Sbjct: 208 LRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLE 257 >gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 296 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 128/258 (49%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + + K L + E +Y+H K KT L A+ ++++ Sbjct: 147 AKAAGPEGMVGGQVADMDAEGKRLTIDELEYIH--KHKTGKLLEFAVLAGAILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + + TI + K ++ +L+ Sbjct: 261 DILEETIAEAKGAISSLQ 278 >gi|254778946|ref|YP_003057051.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Helicobacter pylori B38] gi|254000857|emb|CAX28789.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Helicobacter pylori B38] Length = 307 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 107/184 (58%), Gaps = 7/184 (3%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 EA+ + LS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 121 EAIAQILSNAVLRLSRGEIEDVFVGGSFNSDKQKYWRILEDKTAHFIEASLKSMAILL-- 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N + +G+N G+AFQ++DD+LD + +GK DF+ GK TLP +L +++ Sbjct: 179 -NKDAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTTLPYLLLYEKLN 237 Query: 247 KREK 250 + E+ Sbjct: 238 QHEQ 241 >gi|257052502|ref|YP_003130335.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940] gi|256691265|gb|ACV11602.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940] Length = 280 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/251 (27%), Positives = 130/251 (51%), Gaps = 16/251 (6%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 ++ +GGKR+RP ++L + ++ V A +E +H A+L+ DD++D+S RR + Sbjct: 34 VVLAGGKRVRPTVSLLVCEAVGAEPEDAVDFAVGVELVHNASLVVDDIIDESDRRRDSPS 93 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 A +G+ +++ D L+ +AF + + + A+ A+S L EGE +L+ + Sbjct: 94 AWSAFGHGPALIASDGLIGEAFALF--STDERAMRAVSEAMVELGEGEATELAAMPD--- 148 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 +E+ Y + + KT LF AA E+ ++ A +A Y +GIAFQ+ DDVLD G Sbjct: 149 SEDAYRQLARRKTGALFRAAAELGAIAADADARTVEAFGQYAEQVGIAFQIRDDVLDATG 208 Query: 217 EVNEMGKNIGEDFRNGKPTLPVI--LAFQRGTKREKNFWKSTIND-GKISVENLKKA--- 270 + ++GK G D +P++ + L+ T+R ++ + ++ + VEN + Sbjct: 209 DAEQLGKPAGHDAEMDRPSIVQVTDLSPAEATERARSEADAALDQLETVPVENEQAVEYL 268 Query: 271 -----FIIMRE 276 F++ RE Sbjct: 269 RDLANFVVERE 279 >gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays] gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays] Length = 367 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 129/257 (50%), Gaps = 30/257 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D ++Y + +GGKR+RP L LA ++ + A A+E +HT +L+HDD+ Sbjct: 97 DAMRYALLAGGKRVRPALCLAACAVVGGPEPWAMPAAAAVEMVHTMSLVHDDLPCMDDDD 156 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----------ETKSQEALEALS-LVA 137 LRRGK +V+G +VL GD LLS +F + E + A+ L Sbjct: 157 LRRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPDVDPEKHPARVVRAIGELAR 216 Query: 138 CTLAEG-------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 C +EG +L S+ + + +Y+H+ KTA L A++ + ++I G + Sbjct: 217 CIGSEGLVAGQVVDLEMTGTSETVPLERLEYIHL--HKTAALLEASVVIGAIIGGGTDEQ 274 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ Y ++G+ FQ+VDD+LD E+GK G+D + K T P +L G ++ + Sbjct: 275 IERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLL----GLEKSR 330 Query: 251 NFWKSTINDGKISVENL 267 F + ++D +VE L Sbjct: 331 EFAEELLSD---AVEQL 344 >gi|319892507|ref|YP_004149382.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317162203|gb|ADV05746.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Staphylococcus pseudintermedius HKU10-03] Length = 293 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 27/234 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y + +GGKR+RP+L LAT ML+++ ++ + +A A+E IHT +L+HDD+ L Sbjct: 33 MRYSLEAGGKRIRPLLMLATIKMLDHQKLESGMHVALALEMIHTYSLIHDDLPAMDDDDL 92 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAF--------------CMVIETKSQEALEALSLV 136 RRGK V+G ++L GD LL++AF +IE SQ + + Sbjct: 93 RRGKPTNHTVYGEWLAILAGDALLTKAFEKIALTTHIDAQIKVALIEKISQASGHQGMVG 152 Query: 137 ACTL-AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 TL + E +Q+SL K E ++H KT L A+E +++I ++ + Q L Sbjct: 153 GQTLDMQSENQQISLEK----LESIHIH----KTGALIQFAIEAATIITSIRQTTAQQLI 204 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + +LG+ FQ+ DD+LD G ++GK +G D N K T +L ++G ++E Sbjct: 205 QFSQHLGVIFQIKDDLLDVYGNEAKLGKPVGSDVTNHKSTYVTLLG-EKGAEQE 257 >gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus] Length = 364 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 32/257 (12%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD--VVDD 87 I + ++Y + +GGKR+RP+L +A ++ + ACA+E IHT +L+HDD +D+ Sbjct: 100 IHEAMRYSVLAGGKRVRPVLCIAACELVGGEESMAMPAACAVEMIHTMSLIHDDPPCMDN 159 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRGK V+G +VL GD LL AF T S + +V A GEL + Sbjct: 160 DDLRRGKPTNHKVFGEDIAVLAGDALL--AFSFEHMTGSTVGVSPARIVR---AVGELAK 214 Query: 148 LSLSKNL------DVTEE----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 S+ L D+ E +++HV KTA L ++ + +++ G + Sbjct: 215 SIGSEGLVAGQVVDICSEGLTDVGLEHLEFIHV--HKTAALLEGSVVLGAILGGGSDEEV 272 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++ G ++ + Sbjct: 273 EKLRKFARCIGLLFQVVDDILDVTKSSTELGKTAGKDLVADKVTYPKLM----GIEKSRE 328 Query: 252 FWKSTINDGKISVENLK 268 F + ND +VE L+ Sbjct: 329 FAEELKND---AVEQLR 342 >gi|157962808|ref|YP_001502842.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345] gi|157847808|gb|ABV88307.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345] Length = 293 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 84/271 (30%), Positives = 134/271 (49%), Gaps = 18/271 (6%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDV---VKYLIFSGGKRLRPMLTLATALMLEY 59 +LE L L E++N + RI S ++ P + +K+ GGKR+RP L A ML Sbjct: 2 LLESLKLY-QERINQQLELRIDSLADIDPQLKAAMKHGALIGGKRIRPFLVYAIGDMLGV 60 Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 + A AIE +H +L+HDD+ +DD ALRRG+ + + T++L GD L + A Sbjct: 61 KLSTLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQALA 120 Query: 118 FCMVIE-----TKSQEALEALSLVACT----LAEGELRQLSLS-KNLDVTEEDYLHVIKS 167 F ++ E T SQ +L + + G+ LS + K +++ LH K Sbjct: 121 FEIISEPIENITPSQNLAMVRALANASGYSGMCGGQAMDLSATDKQIELATLIQLH--KL 178 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KT L A+E + + A ++ RQAL + +G+AFQ+ DDVLD E+GK G Sbjct: 179 KTGALIRCAVEFAIIAAKIEGQERQALLDFADAIGLAFQVQDDVLDIIASTEELGKPQGS 238 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 D + K T P +L + + + + ++ Sbjct: 239 DTDSNKSTYPKLLGLEGAQETASSLIEDALS 269 >gi|317179364|dbj|BAJ57152.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F30] Length = 307 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 119/215 (55%), Gaps = 14/215 (6%) Query: 42 GKRLRPMLTLATALMLEYRGD----NHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L + D + L CAI E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLNEKTDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K E + +ALS L+ GE+ + + + + Sbjct: 92 INALFGNFNAVMLGDVFYSKAFFEL--SKMGELIAQALSNAVLRLSRGEIEDVFVGECFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ N + +G+N G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFIEASLKSMAILL---NKDAKIYADFGLNFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +GK DF+ GK TLP +L +++ + E+ Sbjct: 207 QDAKTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQ 241 >gi|290891441|ref|ZP_06554500.1| hypothetical protein AWRIB429_1890 [Oenococcus oeni AWRIB429] gi|290478883|gb|EFD87548.1| hypothetical protein AWRIB429_1890 [Oenococcus oeni AWRIB429] Length = 335 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 86/263 (32%), Positives = 136/263 (51%), Gaps = 27/263 (10%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALMLEYRGDNHV 65 +D+EKV IL + +VE + + LI + GK +R ++T+ T + + D Sbjct: 13 QDIEKVK-EILAQQHFNVEPYQEKTEVLIQNNGKMIRALITILFGRYTLTVNQKNYDQET 71 Query: 66 LL-----ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + A AIE +H ATL+HDDV+D++ RRG + +GN+ ++ +GD L ++ F + Sbjct: 72 IFSIDQCAAAIELLHLATLVHDDVIDNAEKRRGLTTLQNFFGNKNTIYLGDILFTKYFYL 131 Query: 121 VIE-TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + S+E + S + GEL Q +L + T +Y IK KTA LFS + V Sbjct: 132 LTSLAPSKEFIAYHSSAMEKVLTGELIQDALKFHKQTTLAEYYQAIKGKTATLFSLS-AV 190 Query: 180 SSLIAGVQN--------SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 S + G +N + A ++G NLG+AFQ++DD+ D V GK ED + Sbjct: 191 SGVWLGKKNKQFDEDNLEFKNAF-NFGYNLGMAFQMLDDLKDLNPLVKN-GKPKFEDLKA 248 Query: 232 GKPTLPVILAFQRGTKREKNFWK 254 G TLP+IL T ++K+F K Sbjct: 249 GIYTLPIIL-----TLKDKSFQK 266 >gi|261837687|gb|ACX97453.1| octaprenyl-diphosphate synthase [Helicobacter pylori 51] Length = 307 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 128/234 (54%), Gaps = 11/234 (4%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E + +ALS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 121 ELIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILL-- 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N + +G+N G+AFQ++DD+LD + +GK DF+ GK TLP +L +++ Sbjct: 179 -NKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTTLPYLLLYEKLN 237 Query: 247 KREKNFWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + E+ S D +E K+ F ++ + +T A Y +KA ++++ Sbjct: 238 QHEQGLLISYFKQDSHEIIEWTKEKF---KQYGIIEETLKTAQVYSKKALEAIK 288 >gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293] gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293] Length = 296 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 83/258 (32%), Positives = 125/258 (48%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ S+++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIH--KHKTGKLLEFAVLAGSILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L + +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + + TI K ++ +L+ Sbjct: 261 DILEETIAKAKDAISSLQ 278 >gi|225430848|ref|XP_002273789.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 368 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 117/224 (52%), Gaps = 15/224 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + +GGKR+RP+L +A ++ + ACA+E IHT +L+HDD+ +D+ LR Sbjct: 108 MRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLR 167 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLVACT-----LAE 142 RGK V+G ++L GD LL+ AF + + A+ +A + L Sbjct: 168 RGKPTNHKVFGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVA 227 Query: 143 GELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ + DV E +Y+HV KTA L A+ + +++ G N + L+ + Sbjct: 228 GQVVDICSEGLKDVGLEHLEYIHV--HKTAALLEGAVVLGAILGGGSNEEIEKLRKFARC 285 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+ FQ+VDD+LD E+GK G+D K T P +L ++ Sbjct: 286 IGLLFQVVDDILDVTKSSQELGKTAGKDLVADKLTYPKLLGIEK 329 >gi|295319241|gb|ADF99618.1| geranyltranstransferase [Clostridium botulinum F str. 230613] Length = 290 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 121/225 (53%), Gaps = 11/225 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKR+RP+L L T + + + +A AIE IHT +L+HDD+ +D+ Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACT----- 139 LRRGK ++G ++L GD LL++A ++ E ++AL+A +A Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALKACYTIAKAAGVDG 148 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + G++ + LS++ ++ ++ ++ + K L A++ +++ + + L YG Sbjct: 149 MIGGQVVDI-LSEDKSISLDELYYMQQKKAGALIKASILAGAILGSATYTDIELLGEYGD 207 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NLG+AFQ+ DD+LD G+ +GK D N K T + ++ Sbjct: 208 NLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEK 252 >gi|156093832|ref|XP_001612954.1| prenyl transferase [Plasmodium vivax SaI-1] gi|148801828|gb|EDL43227.1| prenyl transferase, putative [Plasmodium vivax] Length = 522 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 2/184 (1%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+N + A E IH +LLHDDV+DDS RRG A +GN+ S+L GDFLL++A + Sbjct: 246 GENQYKIIAASEIIHMGSLLHDDVIDDSNNRRGAPALHKKYGNKISILSGDFLLARASSV 305 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEV 179 T + + V +L +GEL Q +L N++ + Y KTA LFS Sbjct: 306 FAGTGCPQICRRFAYVVESLIKGELLQTNLKFNNIEDALKTYFIKTYHKTASLFSHLFAC 365 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++++ V + + G+++G+AFQL DD LDY+ + N K I D N T P + Sbjct: 366 IAILSFKNEKVIELCFNLGLHIGMAFQLYDDYLDYKPDKN-TNKPILNDLNNSIKTAPFL 424 Query: 240 LAFQ 243 ++ Sbjct: 425 FSYN 428 >gi|154334614|ref|XP_001563554.1| farnesyl synthetase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134060575|emb|CAM42123.1| putative solanesyl-diphosphate synthase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 359 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 90/317 (28%), Positives = 152/317 (47%), Gaps = 35/317 (11%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLT--LATALM---------------LEYRGDNHVL---- 66 E++ KY + +GGK +RP L +A A++ L+ +L Sbjct: 52 EVLDHAGKYALAAGGKLMRPALVALMAHAMLPLDVSARLLEEPIGSLDEVTPGTILPFLR 111 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+L+HDDV+D S +RRG+ A V+ + +VL GD++L++A + + Sbjct: 112 LAEVTELIHTASLVHDDVIDSSDMRRGRPALHKVYDTKRAVLAGDYILARASFYIATLQV 171 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + ++ L GEL Q+ ++ E+ KTA L S +L ++++ Sbjct: 172 PRIVILMTTALEELMSGELLQMDGCFDIPRYEQKSF----CKTASLISNSLASTAVLVDP 227 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 N ++ Q +G +LGIAFQ++DD LD G+ MGK D + G T+PV+L QR Sbjct: 228 GNEALEQTAFDFGRHLGIAFQILDDCLDITGDEKTMGKPKLADMKEGIATIPVLLVAQRN 287 Query: 246 TKREKNFWK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 K +K + S + D + +E ++K A+ + RA + + +SL L Sbjct: 288 AKVDKMVRRRFSELGDVEYCLEAMEK-------EGAVAEAIQRADEHCRLGIESLHKLHH 340 Query: 304 SSWKKSLMEVVDFCLQR 320 S + +L + + R Sbjct: 341 SPARDALANALLMVINR 357 >gi|74316898|ref|YP_314638.1| farnesyl-diphosphate synthase [Thiobacillus denitrificans ATCC 25259] gi|74056393|gb|AAZ96833.1| polyprenyl synthetase [Thiobacillus denitrificans ATCC 25259] Length = 296 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 119/229 (51%), Gaps = 14/229 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + GGKR+RP+L A + + A A+E IH +L+HDD+ Sbjct: 36 EAMRYAVLGGGKRVRPLLAFAAGDVTGAAVEQVQHAAAAVELIHAYSLVHDDMPAMDDDA 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLV--------ACTL 140 LRRGK + + T++LVGD L S AF ++ +Q A L++V + + Sbjct: 96 LRRGKPTVHVEFDEPTALLVGDALQSLAFDILASPGLAQAASTQLAMVQLLARASGSRGM 155 Query: 141 AEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A G+ L+ + K+LD+TE +++H+ KT L A++ + + + R AL Y Sbjct: 156 AGGQAIDLANVGKSLDLTELEFMHI--HKTGALIRASVLLGAECGTLSEPARTALDHYAK 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +G+AFQ+VDDVLD +GK G+D N KPT +L QR +R Sbjct: 214 CIGLAFQVVDDVLDAEASTATLGKTAGKDAANNKPTYVSLLGVQRARER 262 >gi|297163084|gb|ADI12796.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis BCW-1] Length = 337 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 141/287 (49%), Gaps = 12/287 (4%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L L +A + + + A A+E +H +L+HDD++D RR + +W Sbjct: 53 GKAVRPALALLSAEAVGAPPEVALPGAVAVELVHNFSLVHDDLMDGDEERRHRRTVWKLW 112 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDVTE 158 G +++L GD +L+ A ++++T A A L+A T L G+++ LS + VT Sbjct: 113 GPSSAILTGDAMLALAQEVLLDTGLPTAAPAARLLARTTRHLIRGQVQDLSFEQRSHVTV 172 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 E+ + + KT L SA+ + +++AG + AL YG +G+AFQLVDDVL G+ Sbjct: 173 EECIDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDDVLGIWGDP 232 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR--- 275 GK + D R+ K +LPV A + G+ E L++ ++ Sbjct: 233 AVTGKPVHSDLRSRKKSLPVSHALNQDGPLSDELAAWLTTPGEPGEEELRRVAGLIEGAG 292 Query: 276 -ENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320 + AL + R A+D+LR + D+ + L+ + F + R Sbjct: 293 GRDWALAEAARRM----ALAEDTLRSIKLDAGARDGLLALGRFVVDR 335 >gi|295100831|emb|CBK98376.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii L2-6] Length = 296 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 110/218 (50%), Gaps = 10/218 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +Y + GGKR+R +L LA ML + A A+E +H +L+HDD+ +D+ + Sbjct: 38 AARYSLLGGGKRIRAVLVLAVCDMLHGNAEAAEQFAAAVEMLHCYSLIHDDLPCMDNDDM 97 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRGK + +G T++L GD LL++AF V + ++ + A R + Sbjct: 98 RRGKPSCHKAFGESTAMLAGDVLLTEAFEAVAGAPTPASV-CVHAAQALGAGAGSRGMVY 156 Query: 151 SKNLDV-------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + LD+ EE + + KT L +AA+++ A R+AL++Y +G+ Sbjct: 157 GQELDLKYEALAAAEEQLRLIHRHKTGALINAAIQMGGAAAQADEVQRKALEAYAYGIGL 216 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+VDDVLD G ++GK IG D NGK T + Sbjct: 217 VFQIVDDVLDVTGTAEQLGKPIGSDSENGKTTFATLFG 254 >gi|225849919|ref|YP_002730153.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Persephonella marina EX-H1] gi|225646113|gb|ACO04299.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Persephonella marina EX-H1] Length = 290 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 74/268 (27%), Positives = 138/268 (51%), Gaps = 17/268 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV-- 84 E + D + Y + +GGKRLRP+L L +A + ++ +A A EFIHT +L+HDD+ Sbjct: 28 EKLFDAMAYSLSAGGKRLRPILVLESAKAVGMEDIKDIVDIAVATEFIHTYSLIHDDLPA 87 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC------ 138 +DD LRRGK +V+G ++L GD L S AF ++ + ++ + L ++ Sbjct: 88 MDDDELRRGKPTCHIVYGEAIAILAGDGLQSYAFELISKNRTVPPDKLLKVINILSHGTG 147 Query: 139 --TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + G+ + K + +++H KTA + ++ ++A +LK+ Sbjct: 148 IYGMVGGQAADILHEKENSFNDINFIHT--HKTAKFIQSCCQMGGVLADATEEEEISLKN 205 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 YG+ +G+AFQ+ DD+LD G+ ++GK +D K T P I + + + + + Sbjct: 206 YGLYIGLAFQIQDDILDEIGDEKKLGKKTKKDRDKNKLTYPSIYGIEESKRIAREYVEKA 265 Query: 257 INDGKISVENLKKAFIIMRENRALVDTE 284 +++ VE LK+ I++ + +++ E Sbjct: 266 VSE----VEKLKRPEILIEIAKFIINRE 289 >gi|257452580|ref|ZP_05617879.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R] gi|317059120|ref|ZP_07923605.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R] gi|313684796|gb|EFS21631.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R] Length = 290 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y GGKR+RP L T +L D A A+E IH+ +L+HDD+ +D+ R Sbjct: 29 MQYACLQGGKRIRPQLLFMTLSLLGKERDLGFPFAAALEMIHSYSLVHDDLPAMDNDDYR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVAC-----TLA 141 RG++ +G +L+GD LL+ AF +++ + S++ LE ++L + + Sbjct: 89 RGQLTTHKKFGEANGILIGDALLTNAFSVMVRGSIGKVPSEKILEIVALFSEYAGIDGMI 148 Query: 142 EGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ ++ + K + ++H + KT L + V+ ++ R+AL+SYG Sbjct: 149 GGQAMDVAYAGKQISYKTLTFIH--EHKTGRLLLLPILVACILGDASLEQREALESYGKK 206 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+AFQ+ DD+LD G E+GK + D + K T P I G ++ K T+ + Sbjct: 207 IGLAFQIKDDILDVEGSFEELGKAVKSDEKLNKSTYPSIF----GLEKSKELLAETLQEA 262 Query: 261 KISVENL 267 ++ +E + Sbjct: 263 RLVLEKV 269 >gi|254501471|ref|ZP_05113622.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] gi|222437542|gb|EEE44221.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] Length = 289 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 116/228 (50%), Gaps = 22/228 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA--IEFIHTATLLHDDV--VDDS 88 +KY +F GG R+RP L LA + + D V ACA IE +H A+L+HDD+ D++ Sbjct: 30 ALKYAVFPGGARIRPRLCLAVSQACGDK-DPRVANACATAIELLHCASLVHDDLPCFDNA 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA---CTLAEGEL 145 A RRGK + +G + ++LVGD L+ AF ET ++E L A A T+A Sbjct: 89 ATRRGKPSVHKEYGEEIALLVGDGLIVTAF----ETLARETLHAPEQTARLVATIANAVG 144 Query: 146 RQLSLSKNLDVTEEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-- 200 + E+ +++ ++KTA LF+ A+ AG +S L Y + Sbjct: 145 SPYGIVAGQAWESEEKINITAYHRAKTASLFTGAVS-----AGALSSYGNPLDWYALADA 199 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 LG A+Q+ DD+ D + + MGK G+D NG+P L L Q K+ Sbjct: 200 LGAAYQVADDLYDAMDDTDSMGKPAGQDAENGRPNLVAELGVQGALKK 247 >gi|281412693|ref|YP_003346772.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10] gi|281373796|gb|ADA67358.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10] Length = 299 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 119/215 (55%), Gaps = 12/215 (5%) Query: 42 GKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GK LR L++ L + RG ++ + A+E +H A+LLHDDV+D + RRGK Sbjct: 40 GKMLRVRLSI---LSFKNRGVEISEDAISSLAALELVHLASLLHDDVIDGARFRRGKETI 96 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 ++G++ +V GD +L AF V E + V ++E EL + LS+ +T Sbjct: 97 NFMYGDKAAVAAGDLVLVSAFYTVEEIGNDRLRRTFLNVIRRMSEAELIE-QLSRYKPIT 155 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 +E+YL +++ K+ LF AL++ +L G + + L + G+ +G +Q+ DD++D+ G Sbjct: 156 KEEYLLIVEGKSGALFGLALQLPALFEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG- 211 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 + ++GK+ D +NG + P++ A ++ + + F Sbjct: 212 MEKIGKDGFLDLKNGVASFPLVTAMEKFPEARQMF 246 >gi|134292965|ref|YP_001116701.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4] gi|134136122|gb|ABO57236.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4] Length = 294 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 12/222 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLA 141 LRRGK + + T++LVGD L SQAF + + + ++ +LV + +A Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALSPVQQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMN 200 G+ L+ S L +T E + + KT L AA+ + +L ++ AL Y Sbjct: 154 GGQAIDLA-SVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADAMAALDVYAGA 212 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D N KPT IL Sbjct: 213 VGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGL 254 >gi|319761830|ref|YP_004125767.1| polyprenyl synthetase [Alicycliphilus denitrificans BC] gi|317116391|gb|ADU98879.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC] Length = 297 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 109/212 (51%), Gaps = 9/212 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKRLRP+L LA + G + ACA+E IH +L+HDD+ +D+ L Sbjct: 38 AMRYAVLDGGKRLRPLLVLAACEAVGGLGQAALRAACAVELIHAYSLVHDDMPCMDNDVL 97 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEA-----LSLVACTLAEGE 144 RRGK + +G ++L GD L + AF + E A++A L+ A Sbjct: 98 RRGKPTVHVRFGQAQALLAGDALQALAFELLTPEDGVPPAMQARLCRLLAQAAGADGMAG 157 Query: 145 LRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + L S +T++ H+ + KT L A++ + + QAL YG +G+ Sbjct: 158 GQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGAACGEPAGVAEQALAQYGAAIGL 217 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 AFQ+VDDVLD + +GK G+D + KPT Sbjct: 218 AFQVVDDVLDVTQDSATLGKTAGKDAASDKPT 249 >gi|288922395|ref|ZP_06416585.1| Polyprenyl synthetase [Frankia sp. EUN1f] gi|288346266|gb|EFC80605.1| Polyprenyl synthetase [Frankia sp. EUN1f] Length = 338 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 3/209 (1%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGK +RP L L +A + + A A+E +H +LLHDD++D RR + A Sbjct: 52 NGGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDLMDGDTERRHRATAWT 111 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDV 156 V+G ++L GD LL A +++E + + A ++ L G+ L DV Sbjct: 112 VFGADGAILAGDALLGLATQVLLEVEGEPGRRAAVILGAGVQDLVRGQAEDLLFESRSDV 171 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + + LH+ KT L + + + +++AG V L YG LG AFQL+DD+L G Sbjct: 172 SVAETLHMEDGKTGALLACSASLGAVLAGAPGEVVDGLAEYGSRLGTAFQLIDDLLGIWG 231 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + GK + D R+ K ++PV++A + G Sbjct: 232 DPAVTGKPVLNDLRSRKKSVPVVVALEAG 260 >gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676] gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676] Length = 296 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ ++++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIH--KHKTGKLLEFAVLAGAILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + TI + K ++ +L+ Sbjct: 261 EILEETIAEAKGAISSLQ 278 >gi|301300397|ref|ZP_07206599.1| polyprenyl synthetase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851999|gb|EFK79681.1| polyprenyl synthetase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 328 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 7/237 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRP-MLTLATALML--EYRGDNHVL 66 K++EKV + +I D + + + +GGK LRP L T L + R D+ L Sbjct: 14 KNIEKVKHNLQDKISVDYPDLQAALSKMASNGGKFLRPAFFLLFTKLTADSQNRVDDKKL 73 Query: 67 L--ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + A ++E +H +TL+HDD++DDS RRG+V+ + +G +V GD+L + F ++ + Sbjct: 74 IDIATSLEVLHMSTLIHDDIIDDSPKRRGEVSVQSQFGKDIAVYAGDYLFTVFFDLITDN 133 Query: 125 KSQEALEAL-SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + S + GEL Q+ N T +YL + KTA LF A + Sbjct: 134 VLDTPFFKINSRTMKKILLGELNQMKHRYNTQQTFLNYLRNVNGKTAYLFRLASAEGAYF 193 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 G + G N+GI+FQ++DD+LDY + + + K ED G +LP++L Sbjct: 194 GGASSQTVSLATRIGQNIGISFQILDDILDY-SDASRLNKPTLEDLATGVYSLPLLL 249 >gi|319937357|ref|ZP_08011764.1| geranyltranstransferase [Coprobacillus sp. 29_1] gi|319807723|gb|EFW04316.1| geranyltranstransferase [Coprobacillus sp. 29_1] Length = 282 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 77/250 (30%), Positives = 124/250 (49%), Gaps = 24/250 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--V 85 + + + Y + + GKRLRP+L L+ ++ Y+ D H+ + ACAIE IHT +L+HDD+ + Sbjct: 24 VKEAMSYSLLAPGKRLRPLLFLS--VLRSYQIDYHIYMDIACAIEMIHTYSLIHDDLPGM 81 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D+ LRRG+ + T++L GD LL+ ++ L+ L A G + Sbjct: 82 DNDDLRRGRPTCHKQFDEATAILAGDALLNLGVNTILNISIDSDLKVKLLNRLYEASG-I 140 Query: 146 RQLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + D+T E L + K KT L + ++++ SLIA S Q S G Sbjct: 141 NGMIYGQQQDITFEKQLANLEQLKDIHKHKTGELIAVSMQLGSLIANP--SDYQYWTSIG 198 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG--------TKREK 250 +LG+AFQ+ DD+LD G ++GK +G D N K T ++ + K + Sbjct: 199 FDLGLAFQIQDDILDVVGNTEQLGKKVGSDQENHKTTYVSLIGIDKSELAIQELFKKCYE 258 Query: 251 NFWKSTINDG 260 N + IN G Sbjct: 259 NIYAMRINHG 268 >gi|148270387|ref|YP_001244847.1| polyprenyl synthetase [Thermotoga petrophila RKU-1] gi|147735931|gb|ABQ47271.1| Polyprenyl synthetase [Thermotoga petrophila RKU-1] Length = 298 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 119/215 (55%), Gaps = 12/215 (5%) Query: 42 GKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GK LR L++ L + RG ++ + A+E +H A+LLHDDV+D + RRGK Sbjct: 39 GKMLRVRLSI---LSFKNRGVEISEDAISSLAALELVHLASLLHDDVIDGARFRRGKETI 95 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 ++G++ +V GD +L AF V E + V ++E EL + LS+ +T Sbjct: 96 NFMYGDKAAVAAGDLVLVSAFYTVEEIGNDRLRRTFLNVIRRMSEAELIE-QLSRYKPIT 154 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 +E+YL +++ K+ LF AL++ +L G + + L + G+ +G +Q+ DD++D+ G Sbjct: 155 KEEYLLIVEGKSGALFGLALQLPALFEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG- 210 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 + ++GK+ D +NG + P++ A ++ + + F Sbjct: 211 MEKIGKDGFLDLKNGVASFPLVTAMEKFPEARQMF 245 >gi|302526347|ref|ZP_07278689.1| polyprenyl diphosphate synthase [Streptomyces sp. AA4] gi|302435242|gb|EFL07058.1| polyprenyl diphosphate synthase [Streptomyces sp. AA4] Length = 343 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 78/284 (27%), Positives = 135/284 (47%), Gaps = 7/284 (2%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGK +R L + +A + V A A+E +H +L+HDD++D RR + Sbjct: 62 NGGKAVRSALAVVSAQAAGAPVEVGVPGAVAVELVHNFSLVHDDLMDGDTERRHRPTVWA 121 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDV 156 +WG+ +++L GD +L+ A +V+++ S A+ A L+ T L G+ ++ + DV Sbjct: 122 LWGSASAILTGDAMLALAQEVVLDSGSPHAVAAGRLLTETTRRLIHGQFLDVAFEQRDDV 181 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + + + KT L SA+ + +++AG V AL +G +G+AFQLVDDVL G Sbjct: 182 GLAECVTMAAGKTGALLSASAAIGAVLAGAPAEVVDALSVFGEEIGLAFQLVDDVLGIWG 241 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + GK++ D + K +LP+ A G + + D + + A + Sbjct: 242 DPAVTGKSVYSDLQARKKSLPITYATTHGGAAGRRLAEWLAGDDDTDLARI-AALVDDAG 300 Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 RA E A + A+ +L LP + L+ + F R Sbjct: 301 GRAWATAE--AARHVATAEQALAALPPGP-RADLVSIARFIAGR 341 >gi|256371287|ref|YP_003109111.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331] gi|256007871|gb|ACU53438.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331] Length = 362 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 99/318 (31%), Positives = 145/318 (45%), Gaps = 39/318 (12%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVVDDSA 89 D + L +GGKRLRP L A L GD+ +L L AIE +HT L+HDD++D S Sbjct: 53 DELSRLTRAGGKRLRPALAFWAARGLGVDGDDELLGDLLVAIELLHTFALVHDDIMDRSE 112 Query: 90 LRRGKVAARL----------------VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 LRRG V +G+ +LVGD L T + ALEA Sbjct: 113 LRRGAVTVHARARDEHRSLKLRGEAETYGDAIGILVGDLAL---------TLADGALEAA 163 Query: 134 SL-VACTLAEGELRQLSLSKNLDV--------TEEDYLHVIKSKTA-VLFSAALEVSSLI 183 L V T + +L +++L + LDV T E H+ K+A L + +L+ Sbjct: 164 PLPVRATFTQLKL-EVNLGQYLDVVASAQLFDTPEHAEHIALFKSAKYTVERPLHLGALL 222 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + V AL + + LG+AFQL DDVL G+ K +G+D R GK TL V + Sbjct: 223 ADPADGVLAALSRFALPLGLAFQLRDDVLGVFGDGARTRKPVGDDLREGKWTLLVAETRE 282 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 R + + + D + L ++R + AL E R +A D+L LP Sbjct: 283 RLDVADLVRFDEALGDANLEGRALDDVLGLVRRSGALDRVEQRIDELADQAMDALGDLPL 342 Query: 304 SSWKK-SLMEVVDFCLQR 320 S+ + +L ++ F + R Sbjct: 343 SAEARCALGDLATFIVAR 360 >gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442] gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B] gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442] Length = 296 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 125/262 (47%), Gaps = 29/262 (11%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------------- 128 + LRRGK V+G +VL GD LL+ AF +++ + +E Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYRQKEISAEKKVRLVLEL 146 Query: 129 --ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A +V +A+ E K L + E +Y+H K KT L A+ S+++ Sbjct: 147 AKAAGPEGMVGGQVADMEAE----GKQLTIDELEYIH--KHKTGKLLEFAVLAGSILSDA 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + L + +G+AFQ+ DD+LD G E+GK IG D N K T + R Sbjct: 201 TEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA- 259 Query: 247 KREKNFWKSTINDGKISVENLK 268 K+ TI K ++ +L+ Sbjct: 260 ---KDILDETIAKAKDAIGSLQ 278 >gi|15924511|ref|NP_372045.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp. aureus Mu50] gi|15927102|ref|NP_374635.1| hypothetical protein SA1352 [Staphylococcus aureus subsp. aureus N315] gi|148268006|ref|YP_001246949.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150394073|ref|YP_001316748.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156979840|ref|YP_001442099.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp. aureus Mu3] gi|253314891|ref|ZP_04838104.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006308|ref|ZP_05144909.2| geranyltranstransferase-like protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793598|ref|ZP_05642577.1| polyprenyl synthetase [Staphylococcus aureus A9781] gi|258411102|ref|ZP_05681382.1| polyprenyl synthetase [Staphylococcus aureus A9763] gi|258420094|ref|ZP_05683049.1| polyprenyl synthetase [Staphylococcus aureus A9719] gi|258437354|ref|ZP_05689338.1| polyprenyl synthetase [Staphylococcus aureus A9299] gi|258443560|ref|ZP_05691899.1| polyprenyl synthetase [Staphylococcus aureus A8115] gi|258446767|ref|ZP_05694921.1| polyprenyl synthetase [Staphylococcus aureus A6300] gi|258448681|ref|ZP_05696793.1| polyprenyl synthetase [Staphylococcus aureus A6224] gi|258453498|ref|ZP_05701476.1| polyprenyl synthetase [Staphylococcus aureus A5937] gi|269203151|ref|YP_003282420.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98] gi|282893023|ref|ZP_06301257.1| geranyltranstransferase [Staphylococcus aureus A8117] gi|282928993|ref|ZP_06336580.1| geranyltranstransferase [Staphylococcus aureus A10102] gi|295406644|ref|ZP_06816449.1| geranyltranstransferase [Staphylococcus aureus A8819] gi|296275122|ref|ZP_06857629.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MR1] gi|297245773|ref|ZP_06929638.1| geranyltranstransferase [Staphylococcus aureus A8796] gi|13701320|dbj|BAB42614.1| ispA [Staphylococcus aureus subsp. aureus N315] gi|14247292|dbj|BAB57683.1| geranyltranstransferase homolog [Staphylococcus aureus subsp. aureus Mu50] gi|147741075|gb|ABQ49373.1| farnesyl-diphosphate synthase [Staphylococcus aureus subsp. aureus JH9] gi|149946525|gb|ABR52461.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156721975|dbj|BAF78392.1| geranyltranstransferase homolog [Staphylococcus aureus subsp. aureus Mu3] gi|257787570|gb|EEV25910.1| polyprenyl synthetase [Staphylococcus aureus A9781] gi|257840252|gb|EEV64716.1| polyprenyl synthetase [Staphylococcus aureus A9763] gi|257843805|gb|EEV68199.1| polyprenyl synthetase [Staphylococcus aureus A9719] gi|257848559|gb|EEV72547.1| polyprenyl synthetase [Staphylococcus aureus A9299] gi|257850966|gb|EEV74909.1| polyprenyl synthetase [Staphylococcus aureus A8115] gi|257854342|gb|EEV77291.1| polyprenyl synthetase [Staphylococcus aureus A6300] gi|257857959|gb|EEV80848.1| polyprenyl synthetase [Staphylococcus aureus A6224] gi|257864229|gb|EEV86979.1| polyprenyl synthetase [Staphylococcus aureus A5937] gi|262075441|gb|ACY11414.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98] gi|282589400|gb|EFB94491.1| geranyltranstransferase [Staphylococcus aureus A10102] gi|282764341|gb|EFC04467.1| geranyltranstransferase [Staphylococcus aureus A8117] gi|285817204|gb|ADC37691.1| Geranyltranstransferase (farnesyldiphosphate synthase) [Staphylococcus aureus 04-02981] gi|294968391|gb|EFG44415.1| geranyltranstransferase [Staphylococcus aureus A8819] gi|297177424|gb|EFH36676.1| geranyltranstransferase [Staphylococcus aureus A8796] gi|312829911|emb|CBX34753.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129799|gb|EFT85789.1| hypothetical protein CGSSa03_01898 [Staphylococcus aureus subsp. aureus CGS03] gi|329727336|gb|EGG63792.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21172] gi|329730812|gb|EGG67190.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21193] Length = 293 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 124/217 (57%), Gaps = 13/217 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 36 YSLNAGGKRIRPVLLLLTLDSLNTEYELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVA--CTLAEGEL 145 K+ V+G T++L GD LL++AF ++ + + L+ LS+ + + G++ Sbjct: 96 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQM 155 Query: 146 RQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + S + +D+ + +H K+KT L + A+ ++ IA V ++ ++ L+SY +LG+ Sbjct: 156 LDMQSEGQPIDLETLEMIH--KTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMM 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 214 FQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 250 >gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] Length = 292 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 117/221 (52%), Gaps = 22/221 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + + Y + +GGKRLRP+L LA+ + + D + A A+E +HT +L+HDD+ +DD Sbjct: 32 IHEAMLYSMRAGGKRLRPVLVLASKELFDSELDA-MPAAIAVECLHTYSLIHDDLPSIDD 90 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRGK + + T+VL GD LL+ AF ++ + +LV GEL + Sbjct: 91 GDLRRGKPTSHKQFDEATAVLAGDALLAYAFQLLARHFANAPDVCANLV------GELGE 144 Query: 148 LSLSKNL------DVT------EEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + S+ L D+ ED L+ I +KT+ L L + +I G AL Sbjct: 145 TAGSERLIGGQMEDILGEGGPLSEDTLNFIHLNKTSALIECCLVMGGIIGGANYEQIDAL 204 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++YG +GIAFQ++DD+LD + MGK+IG D K T Sbjct: 205 RTYGREIGIAFQIIDDILDATSDETTMGKSIGSDAELDKTT 245 >gi|320007257|gb|ADW02107.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331] Length = 367 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 115/226 (50%), Gaps = 3/226 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + + A A+E +H +LLHDD++D RR + V Sbjct: 76 GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 135 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ + L +G+ + +S VT Sbjct: 136 HGPAQAILVGDALFALANEVLLELGTVEAGRAARRLTTASRKLIDGQAQDISYEHRERVT 195 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A+ + +++ G + L++YG +LG+AFQ VDD+L G+ Sbjct: 196 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVDDLLGIWGD 255 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 GK D R K +LPV+ A G + + +D K S Sbjct: 256 PESTGKQTWSDLRQRKKSLPVVAALAAGGPASERLGELLADDAKSS 301 >gi|297155996|gb|ADI05708.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis BCW-1] Length = 365 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 112/224 (50%), Gaps = 3/224 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + + V A A+E +H +LLHDD++D RR + V Sbjct: 72 GGKAVRPALALLSAEVAGQAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 131 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S VT Sbjct: 132 HGPAQAILVGDALFALAGEILLELGTVEAGRATRRLTSATRKLIDGQAQDISYEHRERVT 191 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + L + +KT L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 192 VAECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVDDLLGIWGD 251 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 + GK D R K +LPV+ A G + + + D K Sbjct: 252 PDATGKQTWSDLRQRKKSLPVVAALDAGGEASERLARLLAADAK 295 >gi|308185891|ref|YP_003930022.1| geranyltranstransferase [Pantoea vagans C9-1] gi|308056401|gb|ADO08573.1| geranyltranstransferase [Pantoea vagans C9-1] Length = 264 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 122/241 (50%), Gaps = 28/241 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 + Y GGKRLRP L AT ML + + A A+E IH +L+HDD+ +D+ ALR Sbjct: 1 MHYGALLGGKRLRPFLVYATGEMLHANPASLDVPAAAVECIHAYSLIHDDLPAMDNDALR 60 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL---------------V 136 RG+ + +G T++L GD L + AF ++ + EA+ +S V Sbjct: 61 RGQPTCHIKYGEDTAILAGDALQTLAFSILAD----EAMPGVSAEYRLMMLSELAKASGV 116 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK- 195 A L + K++D+ + + +H + KT L +A+ + +L AG ++ R+AL Sbjct: 117 AGMCGGQALDLAAEGKSIDLDQLEQIH--RHKTGALIRSAVRLGALTAG--DAGREALPL 172 Query: 196 --SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 Y +G+AFQ+ DD+LD G+ +GK G D GK T P +L + + ++ + Sbjct: 173 LDRYAEAIGLAFQVQDDILDVIGDTAVIGKRQGADQDLGKSTYPSLLGLESARAKARDLY 232 Query: 254 K 254 + Sbjct: 233 Q 233 >gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 296 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 23/259 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-------LS 134 + LRRGK V+G +VL GD LL+ AF VI Q+ + A L Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAF-QVIMAYGQKEISAEKKVRLVLE 145 Query: 135 LVACTLAEGELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L EG + + K L + E +Y+H K KT L A+ S+++ Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIH--KHKTGKLLEFAVLAGSILSNATEE 203 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L + +G+AFQ+ DD+LD G E+GK IG D N K T + R Sbjct: 204 QEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA---- 259 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + TI K ++ +L+ Sbjct: 260 KDILEETIAKAKDAISSLQ 278 >gi|94500549|ref|ZP_01307080.1| Polyprenyl synthetase [Oceanobacter sp. RED65] gi|94427339|gb|EAT12318.1| Polyprenyl synthetase [Oceanobacter sp. RED65] Length = 294 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 19/238 (7%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA--IEFIHTATLLHDD 83 D + + D + Y + +GGKR+RP++ AT L GD CA +E IH +L+HDD Sbjct: 28 DAQRLKDAMTYSLLNGGKRVRPLMVYATTRSLS--GDLQAADQCALAVEMIHAYSLVHDD 85 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVA 137 + +DD LRRG+ + + T++L GD L +QAF ++++ Q+ L + +A Sbjct: 86 LPAMDDDELRRGQPTCHIAFDEATAILAGDALQTQAFQVLVQPIDGMAPQQQLRMVQTLA 145 Query: 138 -----CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +A G+ L ++ K +D+ +H+ KT L A++++ L A Sbjct: 146 HASGLAGMAGGQSLDLEAVDKQVDIEYLQNMHL--HKTGALIEASVKLGGLCANASEQQL 203 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 L Y +G+AFQ+ DD+LD + +GK G D KPT +L G KR+ Sbjct: 204 SYLSVYAQAIGLAFQVQDDILDVISDTRTLGKPQGSDESRNKPTYVSLLGLD-GAKRK 260 >gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa] Length = 370 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 29/248 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + +GGKR+RP+L LA ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 108 EAMRYSLLAGGKRVRPVLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDD 167 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRGK V+G +VL GD LL+ AF + + + +S A GEL + Sbjct: 168 LRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTA-----GVSPARIVRAIGELAKSI 222 Query: 150 LSKNL------DVTEE----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 S+ L D+ E +++H+ KTA L A+ + +++ G + + Sbjct: 223 GSEGLVAGQVVDINSEGLSDVGLEQLEFIHL--HKTAALLEGAVVLGAILGGGSDEDVEK 280 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L+ + +G+ FQ+VDD+LD E+GK G+D K T P +L G ++ K F Sbjct: 281 LRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLL----GIEKSKEFA 336 Query: 254 KSTINDGK 261 + D + Sbjct: 337 EKLNRDAQ 344 >gi|86739535|ref|YP_479935.1| polyprenyl synthetase [Frankia sp. CcI3] gi|86566397|gb|ABD10206.1| Polyprenyl synthetase [Frankia sp. CcI3] Length = 338 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 8/218 (3%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D E P L GGK +RP L L +A + + A A+E +H +LLHDD++ Sbjct: 43 DAEGAP-----LSGGGGKLVRPALALLSAQAAGAPAETGLPAAVAVELVHDFSLLHDDLM 97 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAE 142 D RR + A ++G ++L GD LL A +++E + + A ++ L Sbjct: 98 DGDTERRHRPTAWTIFGADGAILAGDALLGLATQVLLEVEGEPGRRAALILGAGVQDLVR 157 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+ L K DV+ + LH+ KT L + + + +++AG + + AL YG LG Sbjct: 158 GQAEDLMFEKRSDVSVAETLHMEDGKTGALLACSASLGAVLAGAGDDMVNALAEYGSRLG 217 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 AFQL+DD+L G+ + GK + D R+ K ++PV++ Sbjct: 218 TAFQLIDDLLGIWGDPSVTGKPVLSDLRSRKKSVPVVV 255 >gi|225377100|ref|ZP_03754321.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM 16841] gi|225211005|gb|EEG93359.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM 16841] Length = 303 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 70/235 (29%), Positives = 122/235 (51%), Gaps = 20/235 (8%) Query: 19 ILKRICSDVE----MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIE 72 I+KR + E I + + Y I +GGKRLRPML T + + G + V+ A+E Sbjct: 24 IIKRYLPEEEGWQKTIMEAMNYSILAGGKRLRPMLMSETYRL--FGGKSKVIEPFMAAME 81 Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETK 125 IHT +L+HDD+ +D+ RRGK V+G +L GD LL+ AF +E Sbjct: 82 MIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLNYAFETAAKAFDMEPD 141 Query: 126 SQEALEALSLVACT-----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ +A+ ++A + G++ + + D+T+E + + KT L +++ + Sbjct: 142 NRNIGKAMQILATKAGIYGMVGGQVVDVQSEDSGDITKEKLDFIYRLKTGALIESSMLIG 201 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +++AG + + ++ +G+AFQ+ DD+LD + +GK IG D +N K T Sbjct: 202 AVLAGATKNEQNTIEKAATEVGLAFQIQDDILDVTSTLEVLGKPIGSDEKNHKAT 256 >gi|262277469|ref|ZP_06055262.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha proteobacterium HIMB114] gi|262224572|gb|EEY75031.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha proteobacterium HIMB114] Length = 292 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 121/224 (54%), Gaps = 13/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y +FSGGK +R L +T + + ++ +A A+E +H+ +L+HDD+ +D+ Sbjct: 34 EAMEYGLFSGGKMIRSYLVQSTCKIFDIDEKKYIPIAAAVECVHSYSLIHDDLPSMDNDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTL-- 140 RRGK + +G T++L G LL+ AF M+ + K + + + ALS + L Sbjct: 94 FRRGKESTHKAYGEYTAILAGSSLLTLAFEMISDPKFEIDEDIKTKIIHALSSSSGHLGI 153 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 A G+ LSL K+ +V +E + + KT L EV+ L++ + + + K G+ Sbjct: 154 AGGQFFDLSLKKS-EVDKETIIDMQNKKTGALMGFCTEVAPLLSH-KKELAKTFKDLGIK 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+ FQ+VDD LD G+ +GK +D GK TL V L ++ Sbjct: 212 IGLLFQIVDDFLDKYGKSETLGKPTQQDESKGKNTLIVHLGEEK 255 >gi|297379465|gb|ADI34352.1| octaprenyl-diphosphate synthase [Helicobacter pylori v225d] Length = 307 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 107/184 (58%), Gaps = 7/184 (3%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E++ + LS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 121 ESIAQTLSNAVLRLSRGEIEDMFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILL-- 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N + +G+N G+AFQ++DD+LD + +GK DF+ GK TLP +L +++ Sbjct: 179 -NKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTTLPYLLLYEKLN 237 Query: 247 KREK 250 + E+ Sbjct: 238 QHEQ 241 >gi|207093075|ref|ZP_03240862.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori HPKX_438_AG0C1] Length = 270 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 108/184 (58%), Gaps = 7/184 (3%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E++ +ALS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 121 ESIAKALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILLDK 180 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +G+N G+AFQ++DD+LD + +GK DF+ GK TLP +L +++ Sbjct: 181 NAKI---YADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTTLPYLLLYEKLN 237 Query: 247 KREK 250 +R++ Sbjct: 238 QRDQ 241 >gi|328949208|ref|YP_004366545.1| polyprenyl synthetase [Treponema succinifaciens DSM 2489] gi|328449532|gb|AEB15248.1| Polyprenyl synthetase [Treponema succinifaciens DSM 2489] Length = 362 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 84/277 (30%), Positives = 142/277 (51%), Gaps = 42/277 (15%) Query: 32 DVVKYLIFSGGKRLRPMLTL----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 + + L+ GGKR RP+L + A A E + LLA +EF+HTA+L+HDD+ D Sbjct: 48 ETTRSLVDLGGKRWRPLLLVLCARACAKDKEKSQEAAYLLAPLVEFVHTASLIHDDIEDS 107 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQA-FCM-----VIETKSQEALEALSLVACTLA 141 S +RRGK AA + +G T++ G +L +A C+ IE K++ L + L Sbjct: 108 SPVRRGKPAAYITYGIDTAINAGSWLYFEAPLCIEKLNCSIELKNR-------LYSNYLM 160 Query: 142 EGELRQLSLSKNLDV----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 ELR+L L + +D+ + ++YL ++K KT L S A + +L N+ Sbjct: 161 --ELRRLHLGQAMDIAWHRDNTKVPSVQEYLKMVKGKTGTLASLAAKTGTL---ASNADE 215 Query: 192 QALKSYGM---NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK- 247 + +K G+ +G FQ++DDV++ GK G+D GK +LPV+ F++ K Sbjct: 216 ETVKKAGIIASEIGAGFQIIDDVINLT--TGNPGKKRGDDIVEGKKSLPVLTFFEQNKKN 273 Query: 248 --REKNFWKSTINDGKISVEN--LKKAFIIMRENRAL 280 + + + I K +E+ ++KA +M +N ++ Sbjct: 274 PQKTQELSQCFIQASKEGIESPAVEKAITLMEQNSSI 310 >gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1] gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1] Length = 296 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 125/258 (48%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E +HT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMVHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ S+++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIH--KHKTGKLLEFAVLAGSILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L + +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + + TI K ++ +L+ Sbjct: 261 DILEETIAKAKDAISSLQ 278 >gi|13431547|sp|Q43133|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; Flags: Precursor gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba] Length = 366 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 116/230 (50%), Gaps = 16/230 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP+L +A ++ + CA+E IHT +L+HDD+ +D+ Sbjct: 99 IHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDN 158 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-------- 139 LRRGK V+G +VL GD LLS AF + S E A + A Sbjct: 159 DDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGT 218 Query: 140 --LAEGELRQLSLSKNLDVTEEDYLH---VIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L G++ +S S+ LD+ H + KTA L A+ + +I G + + L Sbjct: 219 EGLVAGQVVDIS-SEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERL 277 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + + +G+ FQ+VDD+LD E+GK G+D K T P ++ ++ Sbjct: 278 RKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLIADKLTYPKLMGLEK 327 >gi|225025925|ref|ZP_03715117.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353] gi|224956711|gb|EEG37920.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353] Length = 297 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 20/241 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV--VDDS 88 + Y + +GGKRLRPML T M D+ V+ AIE IHT +L+HDD+ +D+ Sbjct: 36 AMNYSVKAGGKRLRPMLMAETYEMFG-GADSSVIEPFMAAIEMIHTYSLIHDDLPALDND 94 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLVACTLAEGEL 145 ALRRG A + +G ++L GD LL+ AF + +++ A +L T G + Sbjct: 95 ALRRGMPTAHIKFGEAMAILAGDALLNYAFETAAKAFDGTNKDIQTAKALQILTRKPG-I 153 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + + +DV +E+ Y+H +KTA L A+ + +++AG ++ Sbjct: 154 YGMIGGQTVDVEQENKAISFDTLMYIH--NNKTAALIECAMMIGAVLAGASEKEVSMIEQ 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 +GIAFQ+ DD+LD E+GK G D +NGK T + ++ K + + + Sbjct: 212 IANKVGIAFQIEDDILDVVSTSEEIGKPAGSDEKNGKNTYVLFKGIEQSKKDAEQYTREA 271 Query: 257 I 257 + Sbjct: 272 L 272 >gi|171320202|ref|ZP_02909262.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5] gi|171094554|gb|EDT39608.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5] Length = 294 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 14/223 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLA 141 LRRGK + + T++LVGD L SQAF + + + ++ +LV + +A Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDGDALSPVQQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--ALKSYGM 199 G+ L+ S L +T E + + KT L AA+ + +L AG S AL Y Sbjct: 154 GGQAIDLA-SVGLKLTREQLETMHRMKTGALLRAAVRMGAL-AGDPPSAETLAALDVYAG 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D N KPT IL Sbjct: 212 AVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGL 254 >gi|330826310|ref|YP_004389613.1| polyprenyl synthetase [Alicycliphilus denitrificans K601] gi|329311682|gb|AEB86097.1| Polyprenyl synthetase [Alicycliphilus denitrificans K601] Length = 297 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 109/212 (51%), Gaps = 9/212 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKRLRP+L LA + G + ACA+E IH +L+HDD+ +D+ L Sbjct: 38 AMRYAVLDGGKRLRPLLVLAACEAVGGLGQAALRAACAVELIHAYSLVHDDMPCMDNDVL 97 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEA-----LSLVACTLAEGE 144 RRGK + +G ++L GD L + AF + E A++A L+ A Sbjct: 98 RRGKPTVHVRFGQAQALLAGDALQALAFELLTPEDGVPPAMQARLCRLLAQAAGADGMAG 157 Query: 145 LRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + L S +T++ H+ + KT L A++ + + QAL YG +G+ Sbjct: 158 GQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGAACGEPARVAEQALAQYGAAIGL 217 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 AFQ+VDDVLD + +GK G+D + KPT Sbjct: 218 AFQVVDDVLDVTQDSATLGKTAGKDAASDKPT 249 >gi|118587470|ref|ZP_01544895.1| heptaprenyl diphosphate synthase, component II [Oenococcus oeni ATCC BAA-1163] gi|118432120|gb|EAV38861.1| heptaprenyl diphosphate synthase, component II [Oenococcus oeni ATCC BAA-1163] Length = 335 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 86/263 (32%), Positives = 136/263 (51%), Gaps = 27/263 (10%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALMLEYRGDNHV 65 +D+EKV IL + +VE + + LI + GK +R ++T+ T + + D Sbjct: 13 QDIEKVK-EILAQQHFNVEPYREKTEVLIQNNGKMIRALITILFGRYTLTVNQKNYDQET 71 Query: 66 LL-----ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + A AIE +H ATL+HDDV+D++ RRG + +GN+ ++ +GD L ++ F + Sbjct: 72 IFSIDQCAAAIELLHLATLVHDDVIDNAEKRRGLTTLQNFFGNKNTIYLGDILFTKYFYL 131 Query: 121 VIE-TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + S+E + S + GEL Q +L + T +Y IK KTA LFS + V Sbjct: 132 LTSLAPSKEFIAYHSSAMEKVLTGELIQDALKFHKQTTLAEYYQAIKGKTATLFSLS-AV 190 Query: 180 SSLIAGVQN--------SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 S + G +N + A ++G NLG+AFQ++DD+ D V GK ED + Sbjct: 191 SGVWLGKKNKQFDEDNLEFKNAF-NFGYNLGMAFQMLDDLKDLNPLVKN-GKPKFEDLKA 248 Query: 232 GKPTLPVILAFQRGTKREKNFWK 254 G TLP+IL T ++K+F K Sbjct: 249 GIYTLPIIL-----TLKDKSFQK 266 >gi|108562668|ref|YP_626984.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori HPAG1] gi|107836441|gb|ABF84310.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori HPAG1] Length = 307 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 76/264 (28%), Positives = 141/264 (53%), Gaps = 18/264 (6%) Query: 43 KRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 K LR L LA +L+ + D +L L +E I TA+LLHDDV+D + +RR + Sbjct: 36 KMLRSKLMLA---LLDEKTDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSI 92 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDV 156 ++GN +V++GD S+AF + +K E + +ALS L+ GE+ + + + + Sbjct: 93 NALFGNFNAVMLGDVFYSKAFFEL--SKMGEVIAQALSNAVLRLSRGEIEDVFVGGSFNS 150 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 ++ Y +++ KTA A+L+ +++ N + +G+N G+AFQ++DD+LD Sbjct: 151 DKQKYWCILEDKTAHFIEASLKSMAILL---NKDAKMYADFGLNFGMAFQIIDDLLDITQ 207 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAFIIMR 275 + +GK DF+ GK TLP +L +++ + ++ S D +E K+ F + Sbjct: 208 DAKTLGKPNFSDFKEGKTTLPYLLLYEKLNQHDQGLLISYFKQDSHEIIEWTKEKF---K 264 Query: 276 ENRALVDTEYRAYSYGQKAKDSLR 299 ++ + +T A Y +KA ++++ Sbjct: 265 QHGIIEETLKIAQVYSKKALEAIK 288 >gi|134093559|ref|YP_001098634.1| geranyltranstransferase [Herminiimonas arsenicoxydans] gi|133737462|emb|CAL60505.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Herminiimonas arsenicoxydans] Length = 294 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 29/262 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y + GGKR+RP+L A + + A A+E IH +L+HDD+ +DD A Sbjct: 35 EAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAVEMIHAYSLVHDDMPCMDDDA 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEAL------SLVACT 139 LRRGK + + ++LVGD L SQAF ++ I+ Q A+ L SL C Sbjct: 95 LRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGGIDPVRQLAMVRLLAKASGSLGMCG 154 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV-----RQAL 194 +L + L NL + E + +H +K+ A L VS L+ + QAL Sbjct: 155 GQAIDLASVGL--NLSLEELEQMHRLKT------GALLRVSVLLGALAGKSLSAEETQAL 206 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 SY +G+AFQ+VDDVLD + +GK G+D + KPT IL G ++ + + Sbjct: 207 DSYAAAIGLAFQVVDDVLDATADSATLGKTAGKDAADNKPTYVSIL----GLEQSRTLAE 262 Query: 255 STINDGKISVENLKKAFIIMRE 276 ND ++E + +RE Sbjct: 263 KLRNDAHRALEQFGEKARRLRE 284 >gi|237749332|ref|ZP_04579812.1| geranyltranstransferase [Oxalobacter formigenes OXCC13] gi|229380694|gb|EEO30785.1| geranyltranstransferase [Oxalobacter formigenes OXCC13] Length = 297 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 117/221 (52%), Gaps = 13/221 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + GGKR+RP+L AT + + A A+E IH +L+HDD+ +D+ LR Sbjct: 40 MRYAVLDGGKRIRPLLVFATGYLFDAEKLALARAAAAVEMIHAYSLVHDDMPCMDNDVLR 99 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVA------CTLAEG 143 RGK + +G T++L GD L +QAF ++ + L E + L++ Sbjct: 100 RGKPTVHVRFGEATALLAGDALQAQAFVVLSNQQCDPVLTVEMMRLLSEAAGAAGMCGGQ 159 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV-RQALKSYGMNLG 202 + S+ K+L V E + +H +K T L +A++ + + + + + AL +Y +G Sbjct: 160 AIDLASVGKSLTVNELENMHRLK--TGALLTASVFLGAYCSKIPTEQEKNALNAYAKAIG 217 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +AFQ+VDD+LD + ++GK G+D + KPT +L + Sbjct: 218 LAFQVVDDILDVTADSADLGKTAGKDSADNKPTYVSLLGLE 258 >gi|254253601|ref|ZP_04946918.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158] gi|124898246|gb|EAY70089.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158] Length = 294 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 10/221 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-ACTLAEGELRQL 148 LRRGK + + T++LVGD L SQAF + + + ++ +LV LA G L Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALSPVQQAALVRELALASGSLGMA 153 Query: 149 S------LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMNL 201 S + +T E + + KT L AA+ + +L ++ AL Y + Sbjct: 154 GGQAIDLASVGIKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADTMAALDVYAGAV 213 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G+AFQ+VDD+LD + +GK G+D N KPT IL Sbjct: 214 GLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGL 254 >gi|238854801|ref|ZP_04645131.1| geranyltranstransferase [Lactobacillus jensenii 269-3] gi|260664032|ref|ZP_05864885.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii SJ-7A-US] gi|282933879|ref|ZP_06339227.1| geranyltranstransferase [Lactobacillus jensenii 208-1] gi|238832591|gb|EEQ24898.1| geranyltranstransferase [Lactobacillus jensenii 269-3] gi|260561918|gb|EEX27887.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii SJ-7A-US] gi|281301968|gb|EFA94222.1| geranyltranstransferase [Lactobacillus jensenii 208-1] Length = 288 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 126/239 (52%), Gaps = 9/239 (3%) Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAI 71 ++ + + + S++E ++ Y + +GGKRLRP+L LAT + L + + +AC I Sbjct: 15 IDHYLEQHLASEIEDKKFSQIMAYSVMAGGKRLRPLLFLATLISLGKEINEKEIRVACGI 74 Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE- 128 E IHT +L+HDD+ +D+ RRG + + WG ++L GD LL + K+ E Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAILAGDALLPMGLEWIASAKNAEM 134 Query: 129 -ALEALSLVACTLAEGELRQLSLSKNLDVTEED-YLHVIKS-KTAVLFSAALEVSSLIAG 185 A+ A ++ +A G+ + + N V E++ +++ ++ KT L A++E++++ A Sbjct: 135 VAVMANAIGPNGMAGGQYLDIDSTNNEAVKEDNNFINRMEWLKTGCLIKASVELATIYAN 194 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + +R+ L + N G A+Q+ DD++D E GK +D GK +L + Sbjct: 195 ANDLLRKNLVDFSANFGRAYQIYDDLVDVIQTSQEAGKATHKDEEEGKNNTLTLLGIDQ 253 >gi|88812690|ref|ZP_01127937.1| geranyltranstransferase [Nitrococcus mobilis Nb-231] gi|88790106|gb|EAR21226.1| geranyltranstransferase [Nitrococcus mobilis Nb-231] Length = 298 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 83/253 (32%), Positives = 129/253 (50%), Gaps = 25/253 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVVDDSA 89 + ++Y + GGKR+RP+L AT L R VL ACA+E IH +L+HDD+ Sbjct: 35 EAMRYAVLGGGKRMRPLLVYATGDAL--RLPRQVLDAPACAVELIHCYSLVHDDLPAMDD 92 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA---------LEALSLVAC 138 LRRG+ + T++LVGD L S AF ++ + EA +E LSL A Sbjct: 93 DDLRRGRPTCHRAYDEVTAILVGDALQSLAFRVLSHCRDGEAGPVQGRLRMIEVLSLAAG 152 Query: 139 T--LAEGE-LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV-RQAL 194 + +A G+ L ++ + + V E + +H+ KT L A++ + +L N+ + L Sbjct: 153 SRGMAGGQSLDYEAVGRQVTVAELEDMHI--HKTGALIRASVMLGALADTTANTTCTERL 210 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 Y +G+AFQ+ DDVLD G+ +GK+ G D R KPT P +L G ++F + Sbjct: 211 DHYAKCVGLAFQVQDDVLDVIGDEARLGKSQGADARLNKPTYPALL----GLDEARDFAR 266 Query: 255 STINDGKISVENL 267 D S+E+ Sbjct: 267 QLCQDAVASLEDF 279 >gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212] gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212] Length = 297 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 75/262 (28%), Positives = 134/262 (51%), Gaps = 19/262 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + ++Y + GGKR+RP+L+ A ++ + ++A A+E IH +L+HDD+ + Sbjct: 32 ERLHKAMRYSVLGGGKRVRPLLSFAAGELVAADLERVTVVAAAVELIHAYSLVHDDLPCM 91 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE---------ALSLV 136 DD LRRGK + + T++L GD L + AF ++ E + E AL+ Sbjct: 92 DDDILRRGKPTCHVEYDEATALLTGDSLQTLAFELLAEKPLADIPETQLQMIAQLALASG 151 Query: 137 ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA-L 194 + +A G+ L S+ K L + E +++H+ KT L AA+ + + + N + A L Sbjct: 152 SRGMAGGQAFDLDSVGKMLSLPELEFMHI--HKTGALIRAAVMLGARCSSCLNDEQLAQL 209 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + +G+AFQ+VDD+LD +GK G+D + KPT IL G + + + Sbjct: 210 DHFAKCVGLAFQVVDDLLDTEATTATLGKTAGKDAEHNKPTYVSIL----GVSQARELAE 265 Query: 255 STINDGKISVENLKKAFIIMRE 276 +D +++ +A + +R+ Sbjct: 266 KLQHDAYQALDGFNEAALRLRQ 287 >gi|317181549|dbj|BAJ59333.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F57] Length = 307 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 128/234 (54%), Gaps = 11/234 (4%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E + +ALS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 121 ELIAKALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILL-- 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N + +G+N G+AFQ++DD+LD + +GK DF+ GK TLP +L +++ Sbjct: 179 -NKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTTLPYLLLYEKLN 237 Query: 247 KREKNFWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + E+ S D +E K+ F ++ + +T A Y +KA ++++ Sbjct: 238 QHEQGLLISYFKQDSHEIIEWTKEKF---KQYGIIEETLKTAQVYSKKALEAIK 288 >gi|187478668|ref|YP_786692.1| geranyltranstransferase [Bordetella avium 197N] gi|115423254|emb|CAJ49787.1| geranyltranstransferase [Bordetella avium 197N] Length = 303 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 28/248 (11%) Query: 19 ILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATA---------LMLEYRGDNHV 65 +L+ + ++ P + ++Y + GGKR+R L A L +E D Sbjct: 22 VLETLMPAADIAPARLHEAMRYAVLGGGKRVRAALVYAAGQACPVNSSLLAIEASMDR-- 79 Query: 66 LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 A A+E IH +L+HDD+ +DD LRRG+ + + T++L GD L AF ++ Sbjct: 80 -AAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFELLAG 138 Query: 124 TKSQEAL-----EALSLVACTL--AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSA 175 AL + L+ A +L A G+ L S+ K L E +H +K T + +A Sbjct: 139 MPIAPALVVQATQVLARAAGSLGMAGGQAIDLHSVGKRLTRDELQTMHSMK--TGAMLAA 196 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++ + ++AG ++VRQAL +Y +G+AFQ+VDD+LD + +GK G+D KPT Sbjct: 197 SVTLGGVVAGASSAVRQALDAYAQAVGLAFQVVDDILDVTADSASLGKTAGKDAVENKPT 256 Query: 236 LPVILAFQ 243 +L + Sbjct: 257 YVSLLGLE 264 >gi|52425115|ref|YP_088252.1| IspA protein [Mannheimia succiniciproducens MBEL55E] gi|52307167|gb|AAU37667.1| IspA protein [Mannheimia succiniciproducens MBEL55E] Length = 300 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 78/268 (29%), Positives = 137/268 (51%), Gaps = 24/268 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + D +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +D+ Sbjct: 37 LADAMKYGLLLGGKRIRPFLVYATGRMLGADTAQLDYAAAAIEAIHAYSLIHDDLPAMDN 96 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 +LRRG+ + + + T++L GD L + AF ++ ++ + A + L L+ + Sbjct: 97 DSLRRGQPTCHIAFDHATAILAGDALQAFAFEILTKSTALSAEQKLRLIQVLSHNSGVFG 156 Query: 148 LSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSYG 198 + L ++LD+ E + + ++KT L SAAL++ + + N++ L Y Sbjct: 157 MCLGQSLDLISEHKQISLSELEQIHRNKTGALLSAALKMGFICSSHFADNALEAKLDRYA 216 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD G++ +GKN+G D + K T P +L ++ + + + + Sbjct: 217 AAIGLAFQVQDDILDIEGDLAAIGKNVGSDLESDKSTYPKLLGLAGAKQKARELYVAAVG 276 Query: 259 DGKISVENLK---------KAFIIMREN 277 + +E+L FII R+N Sbjct: 277 E----LEHLPFDTTALRALAEFIINRKN 300 >gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241] gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342] gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241] gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342] gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 296 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 83/258 (32%), Positives = 125/258 (48%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ S+++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIH--KHKTGKLLEFAVLAGSILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L + +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + + TI K ++ +L+ Sbjct: 261 DILEETIAKAKDAIGSLQ 278 >gi|308063102|gb|ADO04989.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori Sat464] Length = 307 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 128/234 (54%), Gaps = 11/234 (4%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E++ + LS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 121 ESIAQTLSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILL-- 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N + +G+N G+AFQ++DD+LD + +GK DF+ GK TLP +L +++ Sbjct: 179 -NKDTKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTTLPYLLLYEKLN 237 Query: 247 KREKNFWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + E+ S D +E K+ F ++ + +T A Y +KA ++++ Sbjct: 238 QHEQGLLISYFKQDSHEIIEWTKEKF---KQYGIIEETLKTAQVYSKKALEAIK 288 >gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15] gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15] Length = 296 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ ++++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIH--KHKTGKLLEFAVLAGAILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + TI + K ++ +L+ Sbjct: 261 AILEETIAEAKGAISSLQ 278 >gi|161521357|ref|YP_001584784.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616] gi|189352476|ref|YP_001948103.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616] gi|221197059|ref|ZP_03570106.1| geranyltranstransferase [Burkholderia multivorans CGD2M] gi|221203731|ref|ZP_03576749.1| geranyltranstransferase [Burkholderia multivorans CGD2] gi|221212347|ref|ZP_03585324.1| geranyltranstransferase [Burkholderia multivorans CGD1] gi|160345407|gb|ABX18492.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616] gi|189336498|dbj|BAG45567.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616] gi|221167446|gb|EED99915.1| geranyltranstransferase [Burkholderia multivorans CGD1] gi|221175897|gb|EEE08326.1| geranyltranstransferase [Burkholderia multivorans CGD2] gi|221183613|gb|EEE16013.1| geranyltranstransferase [Burkholderia multivorans CGD2M] Length = 294 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 10/221 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-ACTLAEGELRQL 148 LRRGK + + T++LVGD L SQAF + + + ++ +LV LA G L Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAAALSPVQQAALVRELALASGSLGMA 153 Query: 149 S------LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMNL 201 S + +T E + + KT L AA+ + +L ++ AL Y + Sbjct: 154 GGQAIDLASVGIKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADTMAALDVYAGAV 213 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G+AFQ+VDD+LD + +GK G+D N KPT IL Sbjct: 214 GLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGL 254 >gi|321473148|gb|EFX84116.1| hypothetical protein DAPPUDRAFT_47316 [Daphnia pulex] Length = 302 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 14/304 (4%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--------RGDNHVLLACAIEFIHTAT 78 VE + + Y GK LRP++ L A + + +N +A E +H Sbjct: 3 VESVLPLASYHFDGDGKCLRPLVILCWAKAINFILKETSPKVIENQKKVAQVAEMVHGTC 62 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L HDDV+DD+ RR K + G + S+ GDF+L +A + + + + L+ + Sbjct: 63 LYHDDVIDDAIKRRAKPTINFLCGQKKSIWAGDFVLGRALETISQISNNKVCILLTRMIQ 122 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + GEL QL + Y+ KTA +F+ + ++AG +++ +G Sbjct: 123 NVVTGELMQLDAGATEEERFSQYIDKTFKKTASVFAYPCQAVLVLAGADATLQTTAFEFG 182 Query: 199 MNLGIAFQLVDDVLDYRG-EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 LGIA+QLVD + D+ E GK + D G +PV+ A Q+ + + Sbjct: 183 RQLGIAYQLVDGITDFPAIASTEYGKELAVDLNQGLANMPVLFAAQQFPELNPMILRHFK 242 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 G ++ A+ ++ ++ L TE A Y A D + LP S +++ L V Sbjct: 243 EPGDVAT-----AYNLILKSDGLQRTEELAIQYYGDAMDKIAQLPQSPYQEMLFTVTHQL 297 Query: 318 LQRL 321 L ++ Sbjct: 298 LNKI 301 >gi|302874811|ref|YP_003843444.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] gi|307690572|ref|ZP_07633018.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] gi|302577668|gb|ADL51680.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] Length = 290 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 121/219 (55%), Gaps = 14/219 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 I D + Y + GGKR+RP+L L T + + D+ + +A AIE IHT +L+HDD+ Sbjct: 28 IYDSMSYSLNIGGKRIRPLLFLYTYSLFKDEIDDVLDIAGAIEMIHTYSLIHDDLPAMDD 87 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQA----FCMVIETKSQEALEALSLV-----AC 138 LRRG + +G+ ++L GD LL++A F IE++SQ A++A S + A Sbjct: 88 DDLRRGMPTNHIKYGDAIAILAGDGLLNEAMNIMFQYCIESESQLAVKACSYISKSAGAA 147 Query: 139 TLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + G++ + S K + + + Y+H KT L +AA+ ++++AG ++ + L Y Sbjct: 148 GMIAGQIVDIESEGKKISIEKLKYMH--SKKTGALINAAIVSAAILAGADSTEIEKLSEY 205 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G LG+AFQ+ DDVLD G+ +++GK D K Sbjct: 206 GTKLGLAFQIKDDVLDVIGDESKLGKKTLSDENKNKSNF 244 >gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941] gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941] Length = 299 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 65/236 (27%), Positives = 119/236 (50%), Gaps = 12/236 (5%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 +E + + ++Y + +GGKR+RP+L + +A + + + A AIE IHT +L+HDD+ Sbjct: 32 LERLQEAMRYSLLAGGKRVRPLLCMESARLFGAPPERVLPSAAAIELIHTYSLIHDDLPA 91 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---ETKSQEALEALSLVACT-- 139 +D+ RRG+ + +G ++L GD +A ++ E ++ L + +A + Sbjct: 92 MDNDDFRRGRPTSHKKFGEAMAILAGDAFFGEALTLITVRQEGTCEQRLGVVQELASSTG 151 Query: 140 ---LAEGELRQLSLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + G++ + + + L +I + KT L ++ V +++AG +A+ Sbjct: 152 VNGMVGGQVLDMDQTGAGGSADPGMLFMIHRYKTGALIRSSARVGAILAGAGEEGLEAIS 211 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 Y LG+ FQ+VDDVLD G +GK G D GK T + + G +RE + Sbjct: 212 RYATELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVSVFGLE-GARREAD 266 >gi|313672239|ref|YP_004050350.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM 19672] gi|312938995|gb|ADR18187.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM 19672] Length = 298 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 70/253 (27%), Positives = 131/253 (51%), Gaps = 21/253 (8%) Query: 13 EKVNFLILKRICSDVEMIPDVV---KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +KV+ + + + S+ + I +V +Y +F+GGKRLRP L ++ + + D A Sbjct: 14 KKVDSWLEQYVISNSQYIDGLVEAMRYSLFAGGKRLRPALIYSSFGIFDGYFDKVTPFAA 73 Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A+E +HT +L+HDD+ LRRGK +V+G ++L GD LL++AF ++ + Sbjct: 74 AVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHVVYGEGVAILAGDALLTKAFEIMTSSSLN 133 Query: 128 EALEALSLVACT----LAEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFS 174 ++ + ++ +A GE + + + D+ E ++H+ +KTA L S Sbjct: 134 PDVDPVMMLEAANKLAIATGE-KGMVGGQYADLKAEGGFFNDGTVSFIHL--NKTAALIS 190 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 E+ +++ + ++ + +G +G+AFQ++DD+LD E+GKN D + K Sbjct: 191 YCCELGAILGYATDEEKKDMSQFGKKIGLAFQIIDDILDLTCTTEELGKNAKSDLKKEKA 250 Query: 235 TLPVILAFQRGTK 247 T P I ++ K Sbjct: 251 TYPAIFGIEKSRK 263 >gi|225018823|ref|ZP_03708015.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum DSM 5476] gi|224948383|gb|EEG29592.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum DSM 5476] Length = 300 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 79/244 (32%), Positives = 132/244 (54%), Gaps = 24/244 (9%) Query: 20 LKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEF 73 L+R+ D +++ D ++Y + +GGKR+RP+LTL ML GD H L ACA+E Sbjct: 23 LERLLPDEDILQKSVVDAMRYSVTAGGKRIRPVLTLEVCRML--GGDPHKALPFACAVEL 80 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TK 125 IH+ +L+HDD+ +DD A+RRGK + + +G T++L GD LL+ AF T Sbjct: 81 IHSYSLIHDDLPCMDDDAMRRGKPSCHIAFGESTALLAGDALLTLAFETASHAPQTHGTG 140 Query: 126 SQEALEALSLVA-----CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 +E L A+S+++ + G++ L S + ++ +H++ KT L AA ++ Sbjct: 141 CEETLRAISILSRLAGVHGMIGGQVIDLESEGRGIEYPVLHQMHLL--KTGALIKAACQM 198 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + AG Q + Y LG+AFQ+ DD+LD G+ ++GK +G D + K + + Sbjct: 199 GAAAAGAQEEDLDKIGEYADALGLAFQICDDILDVVGDEAQLGKPVGSDKQQQKTSFITL 258 Query: 240 LAFQ 243 + Sbjct: 259 FGLE 262 >gi|116491791|ref|YP_811335.1| geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1] gi|116092516|gb|ABJ57670.1| Geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1] Length = 335 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 85/263 (32%), Positives = 135/263 (51%), Gaps = 27/263 (10%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALMLEYRGDNHV 65 +D+EKV IL + +VE + + LI + GK +R ++T+ T + + D Sbjct: 13 QDIEKVK-EILAQQHFNVEPYREKTEVLIQNNGKMIRALITILFGRYTLTVNQKNYDQET 71 Query: 66 LL-----ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + A AIE +H ATL+HDDV+D++ RRG + +GN+ ++ +GD L ++ F + Sbjct: 72 IFSIDQCAAAIELLHLATLVHDDVIDNAEKRRGLTTLQNFFGNKNTIYLGDILFTKYFYL 131 Query: 121 VIE-TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + S+E + S + GEL Q +L + T +Y IK KTA LFS + V Sbjct: 132 LTSLAPSKEFIAYHSSAMEKVLTGELIQDALKFHKQTTLAEYYQAIKGKTATLFSLS-AV 190 Query: 180 SSLIAGVQN--------SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 S + G +N + A ++G NLG+AFQ++DD+ D V GK ED + Sbjct: 191 SGVWLGKKNKQFDEDNLEFKNAF-NFGYNLGMAFQMLDDLKDLNPLVKN-GKPKFEDLKA 248 Query: 232 GKPTLPVILAFQRGTKREKNFWK 254 G T P+ILA ++K+F K Sbjct: 249 GIYTFPIILAL-----KDKSFQK 266 >gi|312880186|ref|ZP_07739986.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260] gi|310783477|gb|EFQ23875.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260] Length = 303 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 84/233 (36%), Positives = 125/233 (53%), Gaps = 17/233 (7%) Query: 28 EMIPDVVKYLIFS---GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 E+ P + + +++S GGKR+RP+L LA A + LA A E+IHTA+L+HDD+ Sbjct: 34 EVPPRLQEAMVYSLQAGGKRIRPVLCLAAAEQCGLAPRRAMPLALAHEWIHTASLIHDDL 93 Query: 85 VDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--TL 140 LRRGK V+G ++L GD LL+ AF +E +E L A ++ T Sbjct: 94 PCMDDDDLRRGKPTNHRVFGEALALLAGDALLAWAFEFALEGLCREELPAPQILKALQTF 153 Query: 141 AE---------GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 A G++R + E+ +L + ++KT+VL +AL +L+AG + SV Sbjct: 154 ARAVGPRGICGGQVRDTDPQSQSEDPEDVWL-IARTKTSVLLESALVGGALLAGAEPSVV 212 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 A YG +LG AFQ+VDDVLD G+ +GK G+D R GK T + +R Sbjct: 213 SAYGHYGTHLGTAFQIVDDVLDVLGDSATLGKTAGKDARQGKRTFVSVYGLER 265 >gi|257466439|ref|ZP_05630750.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|315917595|ref|ZP_07913835.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|313691470|gb|EFS28305.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 290 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y GGKR+RP L T +L D A A+E IH+ +L+HDD+ +D+ R Sbjct: 29 MQYACLQGGKRIRPQLLFMTLSLLGKERDLGFPFAAALEMIHSYSLVHDDLPAMDNDDYR 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVAC-----TLA 141 RG++ +G +L+GD LL+ AF ++I + +++ LE ++L + + Sbjct: 89 RGQLTTHKKFGEANGILIGDALLTNAFSVMIRGSMGKVAAEKILEIVALFSEYAGIDGMI 148 Query: 142 EGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ ++ + K + ++H + KT L + V+ ++ R+AL+SYG Sbjct: 149 GGQAMDVAYAGKQISYKTLTFIH--EHKTGRLLLLPILVACILGDASLEQREALESYGKK 206 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+AFQ+ DD+LD G E+GK + D + K T P I G ++ K T+ + Sbjct: 207 IGLAFQIKDDILDVEGSFEELGKALKSDEKLNKSTYPSIF----GLEKSKELLTETLQEA 262 Query: 261 KISVENL 267 ++ +E + Sbjct: 263 RLVLEKV 269 >gi|170021207|ref|YP_001726161.1| geranyltranstransferase [Escherichia coli ATCC 8739] gi|169756135|gb|ACA78834.1| Polyprenyl synthetase [Escherichia coli ATCC 8739] Length = 299 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ +D+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDNDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|218768956|ref|YP_002343468.1| geranyltranstransferase [Neisseria meningitidis Z2491] gi|121052964|emb|CAM09318.1| geranyltranstransferase [Neisseria meningitidis Z2491] gi|319411254|emb|CBY91661.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP synthase) [Neisseria meningitidis WUE 2594] Length = 298 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 18/234 (7%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + E + AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVGQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---IETKSQE 128 IH +L+HDD+ +D+ +LRRGK + +G T++L GD L +QAF ++ E + Sbjct: 80 IHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDALQTQAFDVLSRPTELPAAR 139 Query: 129 ALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 L LS++A + ++ K + T+ + +H +K T L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSMGMAGGQAIDLANVGKQMAQTDLEQMHSLK--TGALIRAAVLLGAM 197 Query: 183 -IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 198 SCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|16273345|ref|NP_439590.1| geranyltranstransferase [Haemophilus influenzae Rd KW20] gi|1170589|sp|P45204|ISPA_HAEIN RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|1574277|gb|AAC23087.1| geranyltranstransferase (ispA) [Haemophilus influenzae Rd KW20] Length = 295 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 83/264 (31%), Positives = 138/264 (52%), Gaps = 21/264 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 35 EAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------ 143 LRRG + + T++L GD L S AF ++ +T + + L+L+ LA+G Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISTEQKLALIQI-LAQGAGVQGM 153 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 L +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKRLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND-GKISVENLKKA---FIIMREN 277 ++ KI + +A FII R++ Sbjct: 272 SELEKIPFDTTVRALAEFIITRKS 295 >gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271] gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271] Length = 296 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 83/258 (32%), Positives = 125/258 (48%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ S+++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIH--KHKTGKLLEFAVLAGSILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + TI K ++ +L+ Sbjct: 261 GILEETIAKAKDAIGSLQ 278 >gi|289434644|ref|YP_003464516.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170888|emb|CBH27430.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 293 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 116/216 (53%), Gaps = 9/216 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L+ + V +A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALQVDPMSGVKVATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----CTLAEGEL--RQ 147 K V+G+ T++L GD LL+ AF ++ E ++ + L+ + AEG + +Q Sbjct: 98 KWTNHKVYGDATAILAGDALLTLAFSILAEDENLSFETRIGLINQISFSSGAEGMVGGQQ 157 Query: 148 LSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + ++N VT + + KT L A+ ++ IA + L+ + N+G+ FQ Sbjct: 158 ADMEAENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQ 217 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + DD+LD G+ +MGK G D K T P +L Sbjct: 218 ISDDILDVIGDETKMGKKTGVDAFMNKSTYPELLTL 253 >gi|1303919|dbj|BAA12575.1| YqiD [Bacillus subtilis] Length = 272 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 78/246 (31%), Positives = 128/246 (52%), Gaps = 18/246 (7%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 +PD +K Y + +GGKRLRP++ LA + + + CA+E IHT +L+HDD+ Sbjct: 29 MPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLP 88 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALSLV----- 136 LRRGK V+G T+VL GD LL+++F ++ S E A + L LV Sbjct: 89 CMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELIS 148 Query: 137 -ACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 A T + G++ + + N VT E+ + + KT+ L + +++A + Sbjct: 149 AAGTEGMVGGQVADME-AGNRQVTLEELESIHERKTSKLLGFCVIAGAILADAPEEDIET 207 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L+++ ++GI FQ+ DD+LD G ++GK +G D N K T P +L+ + G K + + Sbjct: 208 LRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLE-GAKHKLDVH 266 Query: 254 KSTIND 259 ND Sbjct: 267 IKEAND 272 >gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200] gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200] Length = 296 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 81/258 (31%), Positives = 127/258 (49%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + + ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGLGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ ++++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIH--KHKTGKLLEFAVLAGAILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + + TI + K ++ +L+ Sbjct: 261 DILEETIAEAKGAISSLQ 278 >gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3] gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3] Length = 296 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + + ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGIGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ S+++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIH--KHKTGKLLEFAVLAGSILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + + TI K ++ +L+ Sbjct: 261 DILEETIAKAKGAIGSLQ 278 >gi|190571159|ref|YP_001975517.1| geranyltranstransferase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018563|ref|ZP_03334371.1| geranyltranstransferase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357431|emb|CAQ54865.1| geranyltranstransferase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995514|gb|EEB56154.1| geranyltranstransferase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 260 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 121/210 (57%), Gaps = 26/210 (12%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y++ + K +R L +A++ + + + + A AIEFIH +L+HDD+ +D+S R Sbjct: 30 MRYVLLAPAKHIRSFLVIASSSIFNIKVEKAITAAAAIEFIHAYSLIHDDLPCMDNSDTR 89 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF-------CMVIETKSQEALEALSLVACTLAEGE 144 RG+ + +G T+VL GD LL+ AF C +I+ SQ A+ +V G+ Sbjct: 90 RGQPSCHKKFGEATAVLAGDALLTLAFEVLSLLNCEIIKVLSQ-AIGMKGMVG-----GQ 143 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L + + D +E +H++K TA LF+A+ E+ ++I G + R+AL +YG+NLG+ Sbjct: 144 I--LDIGADFDKIKE--IHLMK--TAKLFAASCEIGAIIGGATDKEREALYNYGINLGLI 197 Query: 205 FQLVDDVLDYRGE-----VNEMGKNIGEDF 229 FQ DD+ DY + ++ +GKN E++ Sbjct: 198 FQAKDDIEDYEQDKTNNLMSVLGKNEMENY 227 >gi|283470800|emb|CAQ50011.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Staphylococcus aureus subsp. aureus ST398] Length = 293 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 125/216 (57%), Gaps = 11/216 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + + + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 36 YSLNAGGKRIRPVLLLLTLDSLNTKHELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVACTLAEGELRQLSLSK 152 K+ V+G T++L GD LL++AF ++ + + + ++ L ++A G + + + Sbjct: 96 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVG-GQ 154 Query: 153 NLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 LD+ E + L +I K+KT L + A+ ++ IA V ++ ++ L+SY +LG+ F Sbjct: 155 MLDMQSEGQPINLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMMF 214 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 Q+ DD+LD G+ ++GK +G D N K T +L Sbjct: 215 QIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 250 >gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae WA1] gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae WA1] Length = 296 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 130/227 (57%), Gaps = 20/227 (8%) Query: 25 SDVEM---IPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGD--NHVLLACAIEFIHTAT 78 SD+E+ +++KY + +GGKRLRP+LT LA L + GD ++ A A+E IHT + Sbjct: 25 SDIELENSFIEMLKYPLDAGGKRLRPILTCLACEL---FNGDYKKSIIPAVALELIHTYS 81 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +D+ LRRGK + +G ++LVGD LL+ AF ++ +T +++ L Sbjct: 82 LVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTHAFQLLSKTDVKDSTLRKLLF 141 Query: 137 ACTLAEGELRQLSLSKNLDVTEE------DYLHVIKS-KTAVLFSAALEVSSLIA-GVQN 188 + A G + + + + +D+ E D L ++ + KT + A+ + ++ + + + Sbjct: 142 ELSYAAG-INGMVMGQFIDLYYEEKEINFDMLKILHAKKTGAMIRGAIRLGAISSENIND 200 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + + YG +G+AFQ+ DD+LD + +GK +G+D + GK T Sbjct: 201 NDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTVGKDEKEGKLT 247 >gi|194366666|ref|YP_002029276.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3] gi|194349470|gb|ACF52593.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3] Length = 292 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 16/222 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKR+RP+L A+ + + ++ A A+E IH +L+HDD+ +DD AL Sbjct: 35 AMRYSVLGGGKRMRPLLVYASGQLFGAQPESLDAAAMAVELIHAYSLVHDDLPAMDDDAL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--TLAEGE-LRQ 147 RRGK + + T++L GD L ++AF ++ + L A VAC TLA Sbjct: 95 RRGKPTTHIAFDEATAILAGDALQTRAFGLLADAP----LPATLRVACLQTLAHASGASG 150 Query: 148 LSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + + LD+ + + KT L AA+ + +L L S+ Sbjct: 151 MCGGQALDIDATGQQQTLAALTRMHALKTGALIRAAVRMGALCGQAHEPQLAQLDSFADA 210 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 LG+AFQ+ DD+LD ++GK G+D K T P +L Sbjct: 211 LGLAFQVRDDILDVEASSEQLGKTAGKDQAQDKSTFPALLGM 252 >gi|332524231|ref|ZP_08400457.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2] gi|332107566|gb|EGJ08790.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2] Length = 296 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 9/221 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKRLRP+L +A L + + ACA+E IH +L+HDD+ +D+ Sbjct: 36 EAMRYGVLDGGKRLRPLLVMAACEALGGSREAALRSACAVELIHAYSLVHDDMPCMDNDV 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRGK + +G ++L GD + + AF ++ + E SLV ++ Sbjct: 96 LRRGKPTVHVKYGEAQAMLAGDAMQALAFEILTPDEGVEPALQASLVRLLARAAGHAGMA 155 Query: 150 LSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + +D+ L + + KT L ++++ + + QAL YG +G Sbjct: 156 GGQAIDLANTGRLLDEATLREMHRKKTGALLLVSVQMGAACGSPAPATWQALSEYGEAIG 215 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +AFQ+VDD+LD +++GK G+D KPT +L + Sbjct: 216 LAFQVVDDILDCTQASDKLGKTAGKDLEANKPTYVSVLGLE 256 >gi|313638049|gb|EFS03327.1| geranyltranstransferase [Listeria seeligeri FSL S4-171] Length = 293 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 116/214 (54%), Gaps = 9/214 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L+ V +A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALQADPMRGVKVATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----CTLAEGEL--RQ 147 K V+G+ T++L GD LL+ AF ++ E ++ ++L+ + AEG + +Q Sbjct: 98 KWTNHKVYGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEGMVGGQQ 157 Query: 148 LSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + ++N VT + + KT L A+ ++ IA + L+ + N+G+ FQ Sbjct: 158 ADMEAENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQ 217 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + DD+LD G+ +MGK G D K T P +L Sbjct: 218 ISDDILDVIGDETKMGKKTGGDAFMNKSTYPGLL 251 >gi|257455692|ref|ZP_05620921.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60] gi|257446975|gb|EEV21989.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60] Length = 319 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 28/250 (11%) Query: 36 YLIFSGGKRLRPMLTLATALMLE---------YRGDNHVLLAC-AIEFIHTATLLHDDV- 84 Y + +GGKR+RP+L AT ++ ++ N V A A+E +H +L+HDD+ Sbjct: 55 YAMTNGGKRVRPLLVAATFATVKTDNSLANPSHQLSNDVRRAMMAVECLHGYSLVHDDLP 114 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 +DD ALRRG+ + +G ++L GD L + AF + T E E + ++ T A Sbjct: 115 CMDDDALRRGRPTTHIAYGEAAAMLAGDVLQTLAFEALTHTYFGENSEFATPLSATFAP- 173 Query: 144 ELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 R++ + + LD+ TE + +H + KT L A++ + ++ A +S RQAL Sbjct: 174 RARRMVMGQMLDLNGEHQQLSQTELEAIH--RDKTGALIEASVLMGAICANATDSERQAL 231 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 S+ +G+AFQ+ DD+LD + ++GK G D + K T +L G + K + + Sbjct: 232 SSFAQQIGLAFQVQDDILDVTADTEQLGKPAGSDEKLDKSTYVKLL----GVEAAKTYAQ 287 Query: 255 STINDGKISV 264 S + K +V Sbjct: 288 SLFDTAKNAV 297 >gi|326790848|ref|YP_004308669.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427] gi|326541612|gb|ADZ83471.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427] Length = 291 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 23/233 (9%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA--CAIEFIHT 76 + I E + + Y + +GGKR+RP+L L E G + A C IE IHT Sbjct: 19 VFPTIAGPFENLYKAMNYSLLAGGKRIRPVLM---QLAYEAVGGKAEIDAYLCGIEMIHT 75 Query: 77 ATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEAL 130 +L+HDD+ RRGK+ V+G T++L GD LL+ AFC+++E + S E + Sbjct: 76 YSLIHDDLPAMDDDDYRRGKLTNHKVFGEATAILAGDALLNDAFCLMLEDALKSDSMEKV 135 Query: 131 EALSLVACTLAEGE--------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 A+ ++ ++A G L S +K +D D +H+ +KT L SAA ++ ++ Sbjct: 136 RAIHVL--SMASGSAGMIGGQILDMESENKAIDQDTLDLIHL--NKTGALISAATKMGAI 191 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + G L++YG +G FQ+VDD+LD + E+GK I D +N K T Sbjct: 192 LGGGSPREVSLLEAYGKYIGKVFQIVDDILDQTSTIEELGKPINSDEKNHKNT 244 >gi|313633363|gb|EFS00206.1| geranyltranstransferase [Listeria seeligeri FSL N1-067] Length = 293 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 115/216 (53%), Gaps = 9/216 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L+ V +A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALQVDPMRGVKVATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----CTLAEGEL--RQ 147 K V+G+ T++L GD LL+ AF ++ E ++ + L+ + AEG + +Q Sbjct: 98 KWTNHKVYGDATAILAGDALLTLAFSILAEDENLSFETRIGLINQISFSSGAEGMVGGQQ 157 Query: 148 LSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + ++N VT + + KT L A+ ++ IA + L+ + N+GI FQ Sbjct: 158 ADMEAENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAENIGIGFQ 217 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + DD+LD G+ +MGK G D K T P +L Sbjct: 218 ISDDILDVIGDETKMGKKTGVDAFMNKSTYPGLLTL 253 >gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1] gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1] Length = 324 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 117/224 (52%), Gaps = 13/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKRLRP+L A A + + + CA+E IH +L+HDD+ +D+ Sbjct: 62 EAMRYAVLDGGKRLRPLLVWAAAEAVGGQAAATLRAGCAVELIHAYSLVHDDMPCMDNDT 121 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEA----LEALSLVACTL 140 +RRGK + +G +++L GD L + AF +++ S +A L + + + Sbjct: 122 MRRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQARLCRLLGAAAGSHGM 181 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A G+ L S+ K L T+ +H +K+ A+L + L ++ A AL YG Sbjct: 182 AGGQAIDLASVGKQLSETQLREMHRLKTG-ALLLGSVLMGAACNAQTDARALAALTDYGQ 240 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+AFQ+VDD+LD + +GK G+D N KPT +L + Sbjct: 241 ALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPTFVSLLGLE 284 >gi|309753120|gb|ADO85577.1| PntB [Streptomyces arenae] Length = 337 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 112/206 (54%), Gaps = 3/206 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L L +A + + + A A+E +H +L+HDD++D RR + +W Sbjct: 53 GKAVRPALALLSAEAVGAAPEVALPGAVAVELVHNFSLVHDDLMDGDEERRHRRTVWKLW 112 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDVTE 158 G +++L GD +L+ A ++++T A A L+A T L G+++ L+ + VT Sbjct: 113 GPSSAILTGDAMLALAQEVLLDTGLPTAASAARLLARTTRHLIRGQVQDLAFEQRSHVTV 172 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 E+ + + KT L SA+ + +++AG + AL YG +G+AFQLVDDVL G+ Sbjct: 173 EECVDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDDVLGIWGDP 232 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQR 244 GK + D R+ K TLPV A + Sbjct: 233 AVTGKPVHSDLRSRKKTLPVSHALNQ 258 >gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876] gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876] Length = 296 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPSV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K KT L A+ ++++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIH--KHKTGKLLEFAVLAGAILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLFNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + + TI + K ++ +L+ Sbjct: 261 DILEETIAEAKGAISSLQ 278 >gi|300783442|ref|YP_003763733.1| dimethylallyltranstransferase [Amycolatopsis mediterranei U32] gi|299792956|gb|ADJ43331.1| dimethylallyltranstransferase [Amycolatopsis mediterranei U32] Length = 339 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 106/209 (50%), Gaps = 8/209 (3%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK LRP L L A + V A A+E +H +LLHDDV+D RR + A V Sbjct: 61 GGKALRPALVLLCAEAAGGEAADAVPAAVAVELVHNFSLLHDDVMDGDTTRRHRATAWTV 120 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G +VL GD LLS AF ++ + + A + LS L EG+ L + DVT + Sbjct: 121 FGTGPAVLAGDALLSLAFEVLAPSGAANA-KVLSAATLALLEGQAADLDFEQRDDVTPGE 179 Query: 161 YLHVIKSKTAVLFSAA--LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + + + KTA L AA L +S AG ++G +G+AFQ VDD+L G+ Sbjct: 180 CIRMAEGKTAALLGAACTLGATSGPAGADR-----FGAFGRAVGLAFQHVDDLLGIWGDP 234 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 GK + D +N K +LPV+ A GT Sbjct: 235 AVTGKPVYSDLQNRKKSLPVVTALSSGTP 263 >gi|229825480|ref|ZP_04451549.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC 49176] gi|229790043|gb|EEP26157.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC 49176] Length = 307 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 21/252 (8%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV-LLACAIEFIHTATLL 80 ++ + +++ + + Y + +GGKRLRP++ L + + + V A A+E IHT +L+ Sbjct: 26 KLGEEDKLLEEAMNYSLLAGGKRLRPLIMLEIFRLFGGKKEGLVRPFAAALEMIHTYSLI 85 Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA---------FCMVIETKSQEA 129 HDD+ +D+ LRRG+ V+G ++L GD LL+ A +C I + + Sbjct: 86 HDDLPAMDNDDLRRGRPTNHKVYGEAVAILAGDGLLNLAAETSSKAFRYCETI-CEYKRV 144 Query: 130 LEALS-LVACTLAEGE-----LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 EALS L + A+G L LS + TE+ +L + KT L AA + +L+ Sbjct: 145 GEALSRLFTYSGADGMIGGQILDMLSEEGKKEKTEDFFLTMYDLKTGGLIKAAFVIGALL 204 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG ++ G ++G+ FQL DD+LD G+ ++GK + D RN K T +L Sbjct: 205 AGAGEDEIDIIEKVGASVGLVFQLQDDILDISGDETKLGKPVRSDERNNKLTYLKLLGAD 264 Query: 244 RGTK--REKNFW 253 R K EKN + Sbjct: 265 RAKKLINEKNAY 276 >gi|229123698|ref|ZP_04252893.1| Geranyltranstransferase [Bacillus cereus 95/8201] gi|228659833|gb|EEL15478.1| Geranyltranstransferase [Bacillus cereus 95/8201] Length = 296 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 23/259 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-------LS 134 + LRRGK V+G +VL GD LL+ AF VI Q+ + A L Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAF-QVIMAYGQKEISAEKKVRLVLE 145 Query: 135 LVACTLAEGEL-----RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L EG + + K L + E +Y+H K KT L A+ S+++ Sbjct: 146 LAKAAGPEGMVGGQVADMKAEGKQLTIDELEYIH--KHKTGKLLEFAVLAGSILSDATEE 203 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L + +G+AFQ+ DD+LD G E+GK IG D N K T + R Sbjct: 204 QEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA---- 259 Query: 250 KNFWKSTINDGKISVENLK 268 K+ TI K ++ +L+ Sbjct: 260 KDILDETIAKAKDAIGSLQ 278 >gi|308061594|gb|ADO03482.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori Cuz20] Length = 307 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 127/234 (54%), Gaps = 11/234 (4%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E++ + LS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 121 ESIAQTLSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILL-- 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N + +G+N G+AFQ++DD+LD + +GK DF+ GK TLP +L +++ Sbjct: 179 -NKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTTLPYLLLYEKLN 237 Query: 247 KREKNFWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 E+ S D +E K+ F ++ + +T A Y +KA ++++ Sbjct: 238 PHEQGLLISYFKQDSHEIIEWTKEKF---KQYGIIEETLKTAQVYSKKALEAIK 288 >gi|30264253|ref|NP_846630.1| geranyltranstransferase [Bacillus anthracis str. Ames] gi|47529696|ref|YP_021045.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187080|ref|YP_030332.1| geranyltranstransferase [Bacillus anthracis str. Sterne] gi|49478571|ref|YP_038239.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141318|ref|YP_085511.1| geranyltranstransferase [Bacillus cereus E33L] gi|65321563|ref|ZP_00394522.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis str. A2012] gi|118479369|ref|YP_896520.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al Hakam] gi|165872980|ref|ZP_02217602.1| geranyltranstransferase [Bacillus anthracis str. A0488] gi|167638604|ref|ZP_02396880.1| geranyltranstransferase [Bacillus anthracis str. A0193] gi|170687399|ref|ZP_02878616.1| geranyltranstransferase [Bacillus anthracis str. A0465] gi|170709043|ref|ZP_02899473.1| geranyltranstransferase [Bacillus anthracis str. A0389] gi|177654844|ref|ZP_02936601.1| geranyltranstransferase [Bacillus anthracis str. A0174] gi|190565928|ref|ZP_03018847.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I] gi|196034877|ref|ZP_03102284.1| geranyltranstransferase [Bacillus cereus W] gi|196046422|ref|ZP_03113648.1| geranyltranstransferase [Bacillus cereus 03BB108] gi|218905314|ref|YP_002453148.1| geranyltranstransferase [Bacillus cereus AH820] gi|225866160|ref|YP_002751538.1| geranyltranstransferase [Bacillus cereus 03BB102] gi|227816954|ref|YP_002816963.1| geranyltranstransferase [Bacillus anthracis str. CDC 684] gi|228916814|ref|ZP_04080379.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929224|ref|ZP_04092251.1| Geranyltranstransferase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228947895|ref|ZP_04110182.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229186421|ref|ZP_04313585.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1] gi|229601140|ref|YP_002868472.1| geranyltranstransferase [Bacillus anthracis str. A0248] gi|254683942|ref|ZP_05147802.1| geranyltranstransferase [Bacillus anthracis str. CNEVA-9066] gi|254721777|ref|ZP_05183566.1| geranyltranstransferase [Bacillus anthracis str. A1055] gi|254736290|ref|ZP_05193996.1| geranyltranstransferase [Bacillus anthracis str. Western North America USA6153] gi|254754038|ref|ZP_05206073.1| geranyltranstransferase [Bacillus anthracis str. Vollum] gi|254757909|ref|ZP_05209936.1| geranyltranstransferase [Bacillus anthracis str. Australia 94] gi|301055671|ref|YP_003793882.1| geranyltranstransferase [Bacillus anthracis CI] gi|30258898|gb|AAP28116.1| geranyltranstransferase [Bacillus anthracis str. Ames] gi|47504844|gb|AAT33520.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181007|gb|AAT56383.1| geranyltranstransferase [Bacillus anthracis str. Sterne] gi|49330127|gb|AAT60773.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974787|gb|AAU16337.1| geranyltranstransferase [Bacillus cereus E33L] gi|118418594|gb|ABK87013.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al Hakam] gi|164711263|gb|EDR16818.1| geranyltranstransferase [Bacillus anthracis str. A0488] gi|167513452|gb|EDR88822.1| geranyltranstransferase [Bacillus anthracis str. A0193] gi|170126070|gb|EDS94967.1| geranyltranstransferase [Bacillus anthracis str. A0389] gi|170668594|gb|EDT19340.1| geranyltranstransferase [Bacillus anthracis str. A0465] gi|172080505|gb|EDT65591.1| geranyltranstransferase [Bacillus anthracis str. A0174] gi|190562847|gb|EDV16813.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I] gi|195992416|gb|EDX56377.1| geranyltranstransferase [Bacillus cereus W] gi|196022892|gb|EDX61573.1| geranyltranstransferase [Bacillus cereus 03BB108] gi|218538297|gb|ACK90695.1| geranyltranstransferase [Bacillus cereus AH820] gi|225790308|gb|ACO30525.1| geranyltranstransferase [Bacillus cereus 03BB102] gi|227007089|gb|ACP16832.1| geranyltranstransferase [Bacillus anthracis str. CDC 684] gi|228597048|gb|EEK54704.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1] gi|228811882|gb|EEM58216.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830514|gb|EEM76124.1| Geranyltranstransferase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843001|gb|EEM88084.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265548|gb|ACQ47185.1| geranyltranstransferase [Bacillus anthracis str. A0248] gi|300377840|gb|ADK06744.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI] Length = 296 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 23/259 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-------LS 134 + LRRGK V+G +VL GD LL+ AF VI Q+ + A L Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAF-QVIMAYGQKEISAEKKVRLVLE 145 Query: 135 LVACTLAEGELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L EG + + K L + E +Y+H K KT L A+ S+++ Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIH--KHKTGKLLEFAVLAGSILSDATEE 203 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L + +G+AFQ+ DD+LD G E+GK IG D N K T + R Sbjct: 204 QEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA---- 259 Query: 250 KNFWKSTINDGKISVENLK 268 K+ TI K ++ +L+ Sbjct: 260 KDILDETIAKAKDAIGSLQ 278 >gi|294816066|ref|ZP_06774709.1| Polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294328665|gb|EFG10308.1| Polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 369 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 3/205 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + V A A+E +H +LLHDD++D RR + V Sbjct: 78 GGKAVRPALALLSAEAAGAPPEIGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 137 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S VT Sbjct: 138 HGPAQAILVGDALFALANEILLELDTVEAGRATRRLTTATLRLIDGQAQDISYEHRERVT 197 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A+ + +++ G + AL++YG +LG+AFQ VDD+L G+ Sbjct: 198 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALEAYGYHLGLAFQAVDDLLGIWGD 257 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAF 242 GK D R K +LPV+ A Sbjct: 258 PEATGKQTWSDLRQRKKSLPVVAAL 282 >gi|317177056|dbj|BAJ54845.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F16] Length = 307 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 118/215 (54%), Gaps = 14/215 (6%) Query: 42 GKRLRPMLTLATALMLEYRGD----NHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L + D + L CAI E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLNEKTDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K E + +ALS L+ GE+ + + + + Sbjct: 92 INALFGNFNAVMLGDVFYSKAFFEL--SKMGELIAQALSNAVLRLSRGEIEDVFVGECFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ + +G+N G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFIEASLKSMAILLSKDAKI---YADFGLNFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +GK DF+ GK TLP +L +++ + E+ Sbjct: 207 QDAKTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQ 241 >gi|57650478|ref|YP_186407.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL] gi|87160564|ref|YP_494166.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195328|ref|YP_500132.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221639|ref|YP_001332461.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509750|ref|YP_001575409.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140058|ref|ZP_03564551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258451179|ref|ZP_05699214.1| geranyltranstransferase [Staphylococcus aureus A5948] gi|262049107|ref|ZP_06021984.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30] gi|262051188|ref|ZP_06023412.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3] gi|282924770|ref|ZP_06332437.1| geranyltranstransferase [Staphylococcus aureus A9765] gi|284024581|ref|ZP_06378979.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 132] gi|294848552|ref|ZP_06789298.1| geranyltranstransferase [Staphylococcus aureus A9754] gi|304380890|ref|ZP_07363550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|57284664|gb|AAW36758.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL] gi|87126538|gb|ABD21052.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202886|gb|ABD30696.1| geranyltranstransferase, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374439|dbj|BAF67699.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368559|gb|ABX29530.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257861234|gb|EEV84047.1| geranyltranstransferase [Staphylococcus aureus A5948] gi|259160825|gb|EEW45845.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3] gi|259162776|gb|EEW47341.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30] gi|269941012|emb|CBI49396.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus TW20] gi|282592777|gb|EFB97783.1| geranyltranstransferase [Staphylococcus aureus A9765] gi|294824578|gb|EFG41001.1| geranyltranstransferase [Staphylococcus aureus A9754] gi|304340617|gb|EFM06551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198784|gb|EFU29112.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus CGS01] gi|329314199|gb|AEB88612.1| Geranyltranstransferase [Staphylococcus aureus subsp. aureus T0131] gi|329728330|gb|EGG64767.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21189] Length = 293 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 124/217 (57%), Gaps = 13/217 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 36 YSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVA--CTLAEGEL 145 K+ V+G T++L GD LL++AF ++ + + L+ LS+ + + G++ Sbjct: 96 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQM 155 Query: 146 RQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + S + +D+ + +H K+KT L + A+ ++ IA V ++ ++ L+SY +LG+ Sbjct: 156 LDMQSEGQPIDLETLEMIH--KTKTGALLTFAVMSAADIANVDDTTKEHLESYSYHLGMM 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 214 FQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 250 >gi|326444408|ref|ZP_08219142.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 355 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 3/205 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + V A A+E +H +LLHDD++D RR + V Sbjct: 64 GGKAVRPALALLSAEAAGAPPEIGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 123 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S VT Sbjct: 124 HGPAQAILVGDALFALANEILLELDTVEAGRATRRLTTATLRLIDGQAQDISYEHRERVT 183 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A+ + +++ G + AL++YG +LG+AFQ VDD+L G+ Sbjct: 184 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALEAYGYHLGLAFQAVDDLLGIWGD 243 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAF 242 GK D R K +LPV+ A Sbjct: 244 PEATGKQTWSDLRQRKKSLPVVAAL 268 >gi|196041614|ref|ZP_03108906.1| geranyltranstransferase [Bacillus cereus NVH0597-99] gi|229093237|ref|ZP_04224355.1| Geranyltranstransferase [Bacillus cereus Rock3-42] gi|196027602|gb|EDX66217.1| geranyltranstransferase [Bacillus cereus NVH0597-99] gi|228690211|gb|EEL44005.1| Geranyltranstransferase [Bacillus cereus Rock3-42] Length = 296 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 23/259 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-------LS 134 + LRRGK V+G +VL GD LL+ AF VI Q+ + A L Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAF-QVIMAYGQKEISAEKKVRLVLE 145 Query: 135 LVACTLAEGELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L EG + + K L + E +Y+H K KT L A+ S+++ Sbjct: 146 LAKAAGPEGMVGGQVADMEAEGKKLTIDELEYIH--KHKTGKLLEFAVLAGSILSDATEE 203 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L + +G+AFQ+ DD+LD G E+GK IG D N K T + R Sbjct: 204 QEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA---- 259 Query: 250 KNFWKSTINDGKISVENLK 268 K+ TI K ++ +L+ Sbjct: 260 KDILDETIAKAKDAIGSLQ 278 >gi|126458776|ref|YP_001055054.1| polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548] gi|126248497|gb|ABO07588.1| Polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548] Length = 334 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 81/303 (26%), Positives = 150/303 (49%), Gaps = 17/303 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + V Y + +GGKRLRP+LTLA A + + + A +E IH +L++DD++D +R Sbjct: 33 EAVLYQVKTGGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDIIDRGDVR 92 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEALSLVACTLAEGELRQLSL 150 RG R +G+ ++LVG + V++T K + ++ V + EGE + Sbjct: 93 RGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPKPTLFAKEVAEVIKAIDEGERLDILF 152 Query: 151 ------------SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 ++ +VT +DY+ ++ KT L +AA + L + +A ++G Sbjct: 153 EAAGRSDPYFVQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSVSDDRGLAEAAWNFG 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI-LAFQRGTKREKNFWKSTI 257 M G+AFQ++DDVLD G+ + GK IG+D + K V+ +A + E+ + Sbjct: 213 MAAGVAFQIIDDVLDIYGDPKKFGKEIGKDIKEHKRGNAVVAVALSHLGEGERRRLLEIL 272 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 + ++++A ++ A + A Y ++A+ L +P++ +L E++DF Sbjct: 273 AREVVEEADVREAVALLDSVGAREEALRLAARYREEAERHLAKIPNNG---TLKELLDFI 329 Query: 318 LQR 320 + R Sbjct: 330 VAR 332 >gi|254513451|ref|ZP_05125516.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11] gi|221532455|gb|EEE35451.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11] Length = 301 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 118/229 (51%), Gaps = 18/229 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDSA 89 +++ + +GGKRLRP+L L A +L R D VL +ACA+E IH +L+HDD+ +D+ Sbjct: 42 AMRHGVLNGGKRLRPVLVLECAALL-GRCDEGVLDVACALELIHCYSLVHDDLPAMDNDD 100 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----------SQEALEALSLVAC 138 LRRGK + T +L GD LL+ AF ++ + S+E +A +V Sbjct: 101 LRRGKPTVHRAFDEATGILAGDALLTLAFDVIGQEAAHPDATIRLQLSRELSKASGVVG- 159 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 +A G++ L +++ D TE + KT L A +++A N L +G Sbjct: 160 -MAGGQMLDLQ-AEHCDRTEIEIYKFHAMKTGALLRYACRAGAILADASNDNIDRLTRFG 217 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +G++FQ+ DD+LD E+GK G+D GK TL + +R K Sbjct: 218 TTIGLSFQIADDLLDVVASPEELGKATGKDADAGKATLVGLWGVERSRK 266 >gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51] gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 289 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/228 (32%), Positives = 122/228 (53%), Gaps = 15/228 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 + Y + +GGKR+RP+L LA A + ++ + CA+E IHT +L+HDD+ +D+ R Sbjct: 31 MNYSLSAGGKRIRPVLALAAAHAVGGDCEDILPAVCALELIHTYSLIHDDLPAMDNDDYR 90 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVACT-----LAE 142 RG++A V+G ++L GD LL+ AF ++ + S Q L A+ VA + Sbjct: 91 RGRLANHKVFGEGQAILAGDALLTYAFELIAQPMSGVEPQRQLRAIREVAQAAGPEGMVG 150 Query: 143 GELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G++ L K L++ E + +H +K T + A + +++AG +AL SY + Sbjct: 151 GQMLDLEAEEKQLNLAELEQVHRLK--TGAILVVAARLGAILAGGTEEKIEALTSYAQAI 208 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 G+AFQ+ DD+LD + +GK + D R K T P ++ G K E Sbjct: 209 GLAFQIKDDILDLESDSETLGKPVHSDLRQHKSTYPSLMGLA-GAKLE 255 >gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599] gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599] Length = 322 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 124/232 (53%), Gaps = 25/232 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV--VDD 87 + ++Y + GGKR+RP+L A ++ D VL ACA+E IH +L+HDD+ +D+ Sbjct: 57 EAMRYAVLGGGKRVRPLLVYAAGELVG--ADARVLDGAACAVELIHVYSLVHDDMPAMDN 114 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEA-LEALSLVACTLAE 142 +RRGK +G ++LVGD L + AF ++E Q A + A ++VA Sbjct: 115 DDMRRGKPTVHRQYGEAMAMLVGDALQALAFEVLVAPLVEADPQAARVPAATMVAVLARA 174 Query: 143 GELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS--VR 191 ++ + LD+ + + +H ++KT + S ++E+ L+AG Q S + Sbjct: 175 AGSWGMAGGQALDIEGVGLRLSRPQLEAMH--RAKTGAMLSVSVELG-LLAGGQPSADLA 231 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +A++ YG +G+AFQ+VDD+LD + +GK G+D KPT +L + Sbjct: 232 EAMQRYGRAIGLAFQVVDDILDVTADSATLGKTAGKDQAQDKPTYVSLLGLE 283 >gi|302751353|gb|ADL65530.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|320140593|gb|EFW32447.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MRSA131] gi|320144130|gb|EFW35899.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MRSA177] Length = 288 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 124/217 (57%), Gaps = 13/217 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 31 YSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVA--CTLAEGEL 145 K+ V+G T++L GD LL++AF ++ + + L+ LS+ + + G++ Sbjct: 91 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQM 150 Query: 146 RQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + S + +D+ + +H K+KT L + A+ ++ IA V ++ ++ L+SY +LG+ Sbjct: 151 LDMQSEGQPIDLETLEMIH--KTKTGALLTFAVMSAADIANVDDTTKEHLESYSYHLGMM 208 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 209 FQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 245 >gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I] gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I] gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS] Length = 303 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/246 (28%), Positives = 122/246 (49%), Gaps = 22/246 (8%) Query: 19 ILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL------LA 68 +L + ++ P + ++Y + GGKR+R L A G + A Sbjct: 22 VLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVGASMDRAA 81 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 A+E IH +L+HDD+ +DD LRRG+ + + T++L GD L AF ++ Sbjct: 82 AAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFELLAGMPI 141 Query: 127 QEAL-----EALSLVACT--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 AL + L+ A + +A G+ L S+ + L E +H +K T + + ++ Sbjct: 142 APALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMK--TGAMLACSVT 199 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + ++AG ++ RQAL SY +G+AFQ+VDD+LD + +GK G+D + KPT Sbjct: 200 LGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPTYVS 259 Query: 239 ILAFQR 244 +L ++ Sbjct: 260 LLGLEQ 265 >gi|315634196|ref|ZP_07889485.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393] gi|315477446|gb|EFU68189.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393] Length = 296 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 133/264 (50%), Gaps = 16/264 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + D +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 33 LADAMKYGLLLGGKRIRPFLVYATGRMLGADLAQLDYAAAAIEAIHAYSLIHDDLPAMDD 92 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRG + + T++L GD L + AF ++ + + A + L+L+ A ++ Sbjct: 93 DELRRGHKTCHIAFDEATAILAGDALQAFAFEILTDIPTLSAEQKLALIKTLSAASGVKG 152 Query: 148 LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSYG 198 + L ++LD+ E + H+ +KT L +AAL + + + + ++ Q L+ Y Sbjct: 153 MCLGQSLDLISEHKVISLQELEHIHLNKTGALLTAALMMGFICSPHFAEKALAQQLERYA 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK---S 255 +G+AFQ+ DD+LD G+ +GK +G D K T P +L + ++ + ++ + Sbjct: 213 TAIGLAFQVQDDILDIEGDSETIGKTVGSDLTADKSTYPKLLGLEGAKQKAQELYEMALA 272 Query: 256 TINDGKISVENLK--KAFIIMREN 277 + D L FII R+N Sbjct: 273 ELKDLPFDTTALYALAEFIIKRKN 296 >gi|134100514|ref|YP_001106175.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291005007|ref|ZP_06562980.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133913137|emb|CAM03250.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 345 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 99/209 (47%), Gaps = 3/209 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L + A + + A A+E +H +LLHDDV+D RR + A V Sbjct: 60 GGKAIRPALVVLAAEAVGGSPATALPAAVAVELVHNFSLLHDDVMDGDLTRRHRATAWRV 119 Query: 101 WGNQTSVLVGDFLL---SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 +GN ++L GD LL S +Q + L+ L +G++ L+ K DV Sbjct: 120 FGNGPAILAGDALLTLASDVLAASGHPAAQAGVRTLNTAVLELVDGQVADLAFEKRDDVG 179 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + ++ KT L A V + G + L+ +G LG+AFQ VDD+L G+ Sbjct: 180 VAECQTMVAGKTGALLGCACAVGADFGGGSTEQVEHLRRFGELLGLAFQHVDDLLGIWGD 239 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 GK + D R K +LPV+ A GT Sbjct: 240 PEITGKPVHSDLRTRKKSLPVVAALTSGT 268 >gi|329725410|gb|EGG61893.1| geranyltranstransferase [Staphylococcus epidermidis VCU144] gi|329735348|gb|EGG71640.1| geranyltranstransferase [Staphylococcus epidermidis VCU045] Length = 298 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 129/241 (53%), Gaps = 15/241 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + +KY + +GGKR+RP++ L T ML + A A+E IHT +L+HDD+ +D+ Sbjct: 35 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 94 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGELR 146 RRGK+ V+G ++L GD LL++AF +V + E +S++ + A G L Sbjct: 95 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTTIEDSVKVSIIKRLSKASGHLG 154 Query: 147 QLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + + LD+ E + +H ++KT L + ++ + IA V+ ++ + L + Sbjct: 155 MVG-GQALDMESEGKSIRLETLESIH--ETKTGALLNFSVMAAVDIAQVEQNIAKNLDEF 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +LG+ FQ+ DD+LD G+ +++GK +G D N K T +L + ++ N + Sbjct: 212 SHHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLGKEGAEEKLNNHQYLAM 271 Query: 258 N 258 N Sbjct: 272 N 272 >gi|46015555|pdb|1RTR|A Chain A, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate Synthase gi|46015556|pdb|1RTR|B Chain B, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate Synthase Length = 301 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 124/217 (57%), Gaps = 13/217 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 36 YSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVA--CTLAEGEL 145 K+ V+G T++L GD LL++AF ++ + + L+ LS+ + + G++ Sbjct: 96 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQM 155 Query: 146 RQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + S + +D+ + +H K+KT L + A+ ++ IA V ++ ++ L+SY +LG+ Sbjct: 156 LDMQSEGQPIDLETLEMIH--KTKTGALLTFAVMSAADIANVDDTTKEHLESYSYHLGMM 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 214 FQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 250 >gi|42521829|ref|NP_967209.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100] gi|39574359|emb|CAE77863.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100] Length = 289 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 117/213 (54%), Gaps = 17/213 (7%) Query: 19 ILKRICSDVEM-----IPDVVKYLIFS---GGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +++ SD+E+ I ++ K +++S GGKR RP+L+L + + + A A Sbjct: 21 FVEKYLSDMELPAGSAISELRKSMLYSATNGGKRFRPVLSLLVGELFGAGKERILPFAAA 80 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E IHT +L+HDD+ +D+ +RRGK V+G ++L GD LL++AF ++ E Sbjct: 81 VEMIHTYSLIHDDLPCMDNDDMRRGKPTNHKVFGEDFALLAGDALLTEAFMLIAENYGDN 140 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDV-------TEEDYLHVIKSKTAVLFSAALEVSS 181 + L + +R + + +D+ + E+ H+ + KT L A+E ++ Sbjct: 141 SFLVGHLTRLLSSAAGIRGMVGGQAIDLRAGDKQMSLEELTHLHRLKTGALIRVAVEGAA 200 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +IAG + + ++LK +G LG+AFQ+ DDVLD+ Sbjct: 201 VIAGAKPTEIESLKKFGEGLGLAFQVADDVLDH 233 >gi|301170227|emb|CBW29831.1| geranyltranstransferase [Haemophilus influenzae 10810] Length = 296 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 17/242 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 35 EAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------ 143 LRRG + + T++L GD L S AF ++ +T + A + L+L+ LA+G Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALIQI-LAQGAGVQGM 153 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 L +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDQRLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND 259 ++ Sbjct: 272 SE 273 >gi|219964684|gb|ACL68406.1| polyprenyl diphosphate synthase [Streptomyces peucetius ATCC 27952] Length = 314 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 3/208 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + V A A+E +H +LLHDD++D RR + V Sbjct: 23 GGKAVRPALALLSAEAAGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 82 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S VT Sbjct: 83 HGPAQAILVGDALFALANEVLLEIGTVEAGRATRRLTTATRKLIDGQAQDISYEHRERVT 142 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A+ + +++ G + L+SYG +LG+AFQ VDD+L G+ Sbjct: 143 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLESYGYHLGLAFQAVDDLLGIWGD 202 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 203 PVATGKQTWSDLRQRKKSLPVVAALAAG 230 >gi|239927463|ref|ZP_04684416.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672] Length = 342 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 3/226 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L + +A + V A A+E +H +LLHDD++D RR + V Sbjct: 51 GGKAVRPALAVLSAEVTGAAPQTGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 110 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + +A A L+ + L +G+ + +S V+ Sbjct: 111 HGPAQAILVGDALFALANEVLLELGTVDAGRAARRLTTASRALIDGQAQDISYEHRDRVS 170 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G +L+ YG +LG+AFQ VDD+L G+ Sbjct: 171 VEECLEMEGNKTGALLACASSIGAVLGGADERTADSLEKYGYHLGLAFQAVDDLLGIWGD 230 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 GK D R K +LPV+ A G + D K S Sbjct: 231 PEATGKQTWSDLRQRKKSLPVVAALASGGPASGRLGEILAADAKSS 276 >gi|21283203|ref|NP_646291.1| hypothetical protein MW1474 [Staphylococcus aureus subsp. aureus MW2] gi|49486358|ref|YP_043579.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MSSA476] gi|253732175|ref|ZP_04866340.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|297207759|ref|ZP_06924194.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911840|ref|ZP_07129283.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70] gi|21204643|dbj|BAB95339.1| ispA [Staphylococcus aureus subsp. aureus MW2] gi|49244801|emb|CAG43248.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MSSA476] gi|253723964|gb|EES92693.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|296887776|gb|EFH26674.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886086|gb|EFK81288.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70] Length = 293 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 124/217 (57%), Gaps = 13/217 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 36 YSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVA--CTLAEGEL 145 K+ V+G T++L GD LL++AF ++ + + L+ LS+ + + G++ Sbjct: 96 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQM 155 Query: 146 RQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + S + +D+ + +H K+KT L + A+ ++ IA V ++ ++ L+SY +LG+ Sbjct: 156 LDMQSEGQPIDLETLEMIH--KTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMM 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 214 FQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 250 >gi|49483771|ref|YP_040995.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425647|ref|ZP_05602071.1| ispA [Staphylococcus aureus subsp. aureus 55/2053] gi|257428308|ref|ZP_05604706.1| ispA [Staphylococcus aureus subsp. aureus 65-1322] gi|257430945|ref|ZP_05607325.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 68-397] gi|257433634|ref|ZP_05609992.1| ispA protein [Staphylococcus aureus subsp. aureus E1410] gi|257436547|ref|ZP_05612591.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876] gi|282904104|ref|ZP_06311992.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160] gi|282905931|ref|ZP_06313786.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908841|ref|ZP_06316659.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911160|ref|ZP_06318962.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914329|ref|ZP_06322115.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899] gi|282919298|ref|ZP_06327033.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427] gi|282924623|ref|ZP_06332291.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101] gi|283958286|ref|ZP_06375737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus A017934/97] gi|293503404|ref|ZP_06667251.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 58-424] gi|293510420|ref|ZP_06669126.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809] gi|293530960|ref|ZP_06671642.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015] gi|295428100|ref|ZP_06820732.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590934|ref|ZP_06949572.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8] gi|49241900|emb|CAG40594.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271341|gb|EEV03487.1| ispA [Staphylococcus aureus subsp. aureus 55/2053] gi|257275149|gb|EEV06636.1| ispA [Staphylococcus aureus subsp. aureus 65-1322] gi|257278375|gb|EEV09011.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 68-397] gi|257281727|gb|EEV11864.1| ispA protein [Staphylococcus aureus subsp. aureus E1410] gi|257283898|gb|EEV14021.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876] gi|282313458|gb|EFB43853.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101] gi|282317108|gb|EFB47482.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427] gi|282321510|gb|EFB51835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899] gi|282324855|gb|EFB55165.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327105|gb|EFB57400.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331223|gb|EFB60737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595722|gb|EFC00686.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160] gi|283790435|gb|EFC29252.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920228|gb|EFD97294.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015] gi|291095070|gb|EFE25335.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 58-424] gi|291466784|gb|EFF09304.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809] gi|295128458|gb|EFG58092.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575820|gb|EFH94536.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8] gi|312438010|gb|ADQ77081.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH60] gi|315195423|gb|EFU25810.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus CGS00] Length = 293 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 124/217 (57%), Gaps = 13/217 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 36 YSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVA--CTLAEGEL 145 K+ V+G T++L GD LL++AF ++ + + L+ LS+ + + G++ Sbjct: 96 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQM 155 Query: 146 RQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + S + +D+ + +H K+KT L + A+ ++ IA V ++ ++ L+SY +LG+ Sbjct: 156 LDMQSEGQPIDLETLEMIH--KTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMM 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 214 FQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 250 >gi|251792484|ref|YP_003007210.1| geranyltranstransferase [Aggregatibacter aphrophilus NJ8700] gi|247533877|gb|ACS97123.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Aggregatibacter aphrophilus NJ8700] Length = 296 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 81/280 (28%), Positives = 141/280 (50%), Gaps = 28/280 (10%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 + I S + + +KY + GGKR+RP L AT +L + A AIE IH +L Sbjct: 23 FEHINSSPAPLVEAMKYGLLLGGKRIRPFLVYATGRILGANLAHLDYAAAAIEAIHAYSL 82 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD LRRG + + T++L GD L S AF ++ + A + L+L+ Sbjct: 83 IHDDLPAMDDDELRRGHKTCHIAFDEATAILAGDALQSFAFEILTDIPDLSAQQKLALIK 142 Query: 138 CTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAG--V 186 A ++ + L ++LD+ TE +++H+ +KT L +AAL++ + + Sbjct: 143 TLSAAAGVKGMCLGQSLDLISEQKAISLTELEHIHL--NKTGALLTAALKLGFICSPHFA 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ Q L+ Y +G+AFQ+ DD+LD G +GK +G D + K T P +L Sbjct: 201 DEALLQQLERYATAIGLAFQVQDDILDIEGNSETIGKPVGSDLNSDKSTYPKLLGLAGAK 260 Query: 247 KREKNFWKSTINDGKISVENLK---------KAFIIMREN 277 ++ + +++ + + ++NL FII R+N Sbjct: 261 QKAQELYETALAE----LQNLPFDTTALYALAEFIIKRQN 296 >gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa] gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa] Length = 314 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 130/254 (51%), Gaps = 20/254 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + GKR+ P+L +A+ ++ + + LACA+E +H +L+HDD+ +D+ Sbjct: 51 IHEAMRYSLLGNGKRMCPILCIASCELVGGDEELAMPLACALEMVHAMSLIHDDLPCMDN 110 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTLAE 142 LRRGK V+G ++L GD LLS AF I +K++ + A++ + + Sbjct: 111 DDLRRGKPTNHKVFGECIAILAGDALLSLAF-EHIASKTKNVSPDCVVRAIAELGSAIGS 169 Query: 143 -----GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 G++ + S K + + +Y+HV KTA L A+ +++ G ++ + L+ Sbjct: 170 RGVVAGQIVDIDSEGKEVSMKTLEYIHV--HKTAKLLEASAVCGAIMGGADDASIERLRK 227 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y ++G+ +Q+VDD+LD E+GK G+D + K T P ++ G K F Sbjct: 228 YARSIGLLYQVVDDILDATKSSEELGKTAGKDLASNKATYPKLM----GIDEAKKFAAEL 283 Query: 257 INDGKISVENLKKA 270 + K + + A Sbjct: 284 VEQAKKEIASFDSA 297 >gi|323440419|gb|EGA98131.1| geranyltranstransferase [Staphylococcus aureus O11] gi|323443193|gb|EGB00811.1| geranyltranstransferase [Staphylococcus aureus O46] Length = 288 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 124/217 (57%), Gaps = 13/217 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 31 YSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVA--CTLAEGEL 145 K+ V+G T++L GD LL++AF ++ + + L+ LS+ + + G++ Sbjct: 91 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQM 150 Query: 146 RQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + S + +D+ + +H K+KT L + A+ ++ IA V ++ ++ L+SY +LG+ Sbjct: 151 LDMQSEGQPIDLETLEMIH--KTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMM 208 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 209 FQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 245 >gi|15615344|ref|NP_243647.1| geranyltranstransferase [Bacillus halodurans C-125] gi|10175402|dbj|BAB06500.1| geranyltranstransferase [Bacillus halodurans C-125] Length = 294 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 130/251 (51%), Gaps = 17/251 (6%) Query: 9 LKDMEKVNFLILKRICSDVEMI--PDVVK----YLIFSGGKRLRPMLTLATALMLEYRGD 62 L+ ++++ +I +R+ + +E + PD++K Y + +GGKR+RP L LAT + Sbjct: 6 LQFLDEIKDIIEERMPAHIERLNSPDMLKNSMLYSLKAGGKRIRPALLLATMKSFQKDIS 65 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LACAIE IHT +L+HDD+ +RRGK V+G ++L GD LL+ +F + Sbjct: 66 QGIDLACAIEMIHTYSLIHDDLPSMDDDDIRRGKPTNHKVFGEAHAILAGDALLTYSFEI 125 Query: 121 VIETKSQEALEALSLV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 V + K + + L L+ + G++ + +N +T E ++ KT L Sbjct: 126 VAKMKGVDPAKTLCLIEELARAAGPEGMVGGQVADIE-GENQKLTVEGLEYIHHHKTGAL 184 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 S A+ + +A + ++ + LG+ FQ+ DD+LD G+ +GK +G D N Sbjct: 185 LSFAIVAGARLADASEQDIENIRRFSRELGLLFQIKDDILDVEGDQAAIGKPVGSDDGNQ 244 Query: 233 KPTLPVILAFQ 243 K T P +L + Sbjct: 245 KSTYPSLLTLE 255 >gi|6016394|sp|O66126|ISPA_MICLU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|2982677|dbj|BAA25265.1| farnesyl diphosphate synthase [Micrococcus luteus] Length = 291 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 14/240 (5%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +N +L + + + + Y + +GGKR+RP+L L T L + + A+E I Sbjct: 16 INESLLNKYHPAQSRLHEAINYSLSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIALEMI 75 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 HT +L+HDD+ +D+ RRGK+ + T++L GD LL+ AF ++ T+ ++ Sbjct: 76 HTYSLIHDDLPAMDNDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCILNTQLNAEIK- 134 Query: 133 LSLVAC-TLAEGE--------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 LSL+ + A G L K L + E + +H+ KT L AA+ + +I Sbjct: 135 LSLINLLSTASGSNGMVYGQMLDMQGEHKTLTLNELERIHI--HKTGELIRAAIVSAGII 192 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ + L G N+G+ FQ+ DD+LD G +GK +G D N K T +L + Sbjct: 193 MNFNDAQIEQLNIIGKNVGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLE 252 >gi|145636150|ref|ZP_01791820.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittHH] gi|145270672|gb|EDK10605.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittHH] Length = 296 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 17/242 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 35 EAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------ 143 LRRG + + T++L GD L S AF ++ +T + A + L+L+ LA+G Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALIQI-LAQGAGVQGM 153 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 L +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKRLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND 259 ++ Sbjct: 272 SE 273 >gi|294084635|ref|YP_003551393.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664208|gb|ADE39309.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum IMCC1322] Length = 302 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 130/263 (49%), Gaps = 25/263 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-------ACAIEFIHTATLLHDDV 84 D ++Y + +GGKR+R L L A + D + A A+E +H +L+HDD+ Sbjct: 35 DAMRYAVLNGGKRMRAGLVLGAARLAATESDASTYIDSRALRVAAALECLHAYSLIHDDL 94 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 +DD+ RRGK + + + T++L GD L + AF ++ + + + TLA Sbjct: 95 PAMDDADTRRGKSSCHIAYDEATAILAGDALQTLAFEILADDATHPDPAVRVALVTTLAR 154 Query: 143 ---------GELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 G++ L ++ L + E + + ++K T L A +L+ +++ Sbjct: 155 ASGLAGMAGGQMLDLQAETRTLTLAETEQMQMMK--TGALIVCAASCGALVGEASSTLVN 212 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 A+ +Y LG+AFQ+ DD+LDY G+ + MGK +G+D GK + ++ G + K Sbjct: 213 AIVAYADKLGLAFQIADDLLDYDGDSDGMGKPVGQDAIKGKASFVTLM----GVAKAKTE 268 Query: 253 WKSTINDGKISVENLKKAFIIMR 275 S +++ ++++ + A +R Sbjct: 269 ATSLVDNAQMALAPWQDAAAYLR 291 >gi|253733229|ref|ZP_04867394.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH130] gi|253728769|gb|EES97498.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH130] Length = 288 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 124/217 (57%), Gaps = 13/217 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 31 YSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVA--CTLAEGEL 145 K+ V+G T++L GD LL++AF ++ + + L+ LS+ + + G++ Sbjct: 91 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQM 150 Query: 146 RQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + S + +D+ + +H K+KT L + A+ ++ IA V ++ ++ L+SY +LG+ Sbjct: 151 LDMQSEGQPIDLETLEMIH--KTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMM 208 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 209 FQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 245 >gi|215413281|ref|ZP_03421970.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A] gi|298526862|ref|ZP_07014271.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A] gi|298496656|gb|EFI31950.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A] Length = 350 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 4/178 (2%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETK 125 A+E +H TLLHDDV+D A RRG+ VWG ++L+ D L + A ++ E Sbjct: 97 AVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLRDALHATAVRILTGLTDECV 156 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + A+ L + L G+ L +VT +DYL + KTA L + +L+A Sbjct: 157 AVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVAN 216 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ AL+ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A Sbjct: 217 ADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALN 274 >gi|228935501|ref|ZP_04098319.1| Geranyltranstransferase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824253|gb|EEM70067.1| Geranyltranstransferase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 296 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 29/262 (11%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------------- 128 + LRRGK V+G +VL GD LL+ AF +++ +E Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEF 146 Query: 129 --ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A +V +A+ E K L + E +Y+H K KT L A+ S+++ Sbjct: 147 AKAAGPEGMVGGQVADMEAE----GKQLTIDELEYIH--KHKTGKLLEFAVLAGSILSDA 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + L + +G+AFQ+ DD+LD G E+GK IG D N K T + R Sbjct: 201 TEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRA- 259 Query: 247 KREKNFWKSTINDGKISVENLK 268 K+ TI K ++ +L+ Sbjct: 260 ---KDILDETIAKAKDAIGSLQ 278 >gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana] Length = 345 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 17/230 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + S GKR+RPML LA ++ + + ACAIE +H ++L+ DD+ +D+ Sbjct: 78 IREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDN 137 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLL--------SQAFCMV----IETKSQEALEAL-S 134 +LRRGK +V+G ++L L+ S F V I QE ++A+ Sbjct: 138 DSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILKTVQEMVKAVEG 197 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 LVA A+ + + + +++H+ KTA L AA + +++ G + + L Sbjct: 198 LVAGQQADLAGEGMRFDSDTGLEHLEFIHI--HKTAALLEAAAVMGAIMGGGSDEEIERL 255 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +SY +G+ FQ+VDDVLD E+GK G+D GK T P ++ ++ Sbjct: 256 RSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVEK 305 >gi|15231055|ref|NP_188651.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75273683|sp|Q9LJY2|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10, mitochondrial; Short=GGPP synthase 10; Short=GGPS10; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10; AltName: Full=Dimethylallyltranstransferase 10; AltName: Full=Farnesyl diphosphate synthase 10; AltName: Full=Farnesyltranstransferase 10; AltName: Full=Geranyltranstransferase 10; Flags: Precursor gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana] gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP synthetase/farnesyltranstransferase [Arabidopsis thaliana] gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana] Length = 344 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 120/230 (52%), Gaps = 17/230 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + S GKR+RPML LA ++ + + ACAIE +H ++L+ DD+ +D+ Sbjct: 78 IREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDN 137 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLL--------SQAFCMV----IETKSQEALEAL-S 134 +LRRGK +V+G ++L L+ S F V I QE ++A+ Sbjct: 138 DSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILKTVQEMVKAVEG 197 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 LVA A+ + + + +++H+ KTA L AA + +++ G + + L Sbjct: 198 LVAGQQADLAGEGMRFDSDTGLEHLEFIHI--HKTAALLEAAAVMGAIMGGGSDEEIERL 255 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +SY +G+ FQ+VDDVLD E+GK G+D GK T P ++ ++ Sbjct: 256 RSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVEK 305 >gi|311069029|ref|YP_003973952.1| geranyltranstransferase [Bacillus atrophaeus 1942] gi|310869546|gb|ADP33021.1| geranyltranstransferase [Bacillus atrophaeus 1942] Length = 296 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 75/244 (30%), Positives = 131/244 (53%), Gaps = 19/244 (7%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 +PD +K Y + +GGKRLRP++ LA + + + CA+E IHT +L+HDD+ Sbjct: 29 MPDSLKKSMLYSLEAGGKRLRPVVVLAILHAYGKSEKDGIPVGCAVEMIHTYSLIHDDLP 88 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALSLV----- 136 LRRGK V+G T+VL GD LL+++F ++ S++ A + L LV Sbjct: 89 CMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSEDVSADKRLRLVNELIS 148 Query: 137 -ACT--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 A T + G++ + SK++ + E + +H + KTA L + ++ +++A + + Sbjct: 149 AAGTEGMVGGQIADMEAESKSVSLEELESIH--ERKTAKLLAFSVMAGAILADAPENEIE 206 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+++ ++GI FQ+ DD+LD G ++GK +G D N K T P +L+ + + Sbjct: 207 TLRAFSSHIGIGFQIRDDILDLEGNEEKIGKRVGSDTTNDKSTYPSLLSLDGAKNKLADH 266 Query: 253 WKST 256 K+ Sbjct: 267 MKAA 270 >gi|302333198|gb|ADL23391.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus JKD6159] Length = 288 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 124/217 (57%), Gaps = 13/217 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 31 YSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVA--CTLAEGEL 145 K+ V+G T++L GD LL++AF ++ + + L+ LS+ + + G++ Sbjct: 91 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQM 150 Query: 146 RQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + S + +D+ + +H K+KT L + A+ ++ IA V ++ ++ L+SY +LG+ Sbjct: 151 LDMQSEGQPIDLETLEMIH--KTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMM 208 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 209 FQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 245 >gi|261365698|ref|ZP_05978581.1| geranyltranstransferase [Neisseria mucosa ATCC 25996] gi|288565797|gb|EFC87357.1| geranyltranstransferase [Neisseria mucosa ATCC 25996] Length = 298 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 127/243 (52%), Gaps = 20/243 (8%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R +P + ++Y+ GGKRLRP+L LA + + + + AIE Sbjct: 20 LLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 +H +L+HDD+ +D+ +LRRGK + + T++LVGD L +QAF ++ A Sbjct: 80 VHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRPTGLPAEH 139 Query: 132 ALSLVAC--------TLAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +++++ +A G+ L+ + K ++ + + +H +K T L AA+ + +L Sbjct: 140 QIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLK--TGALIRAAVVLGAL 197 Query: 183 IAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +S VR L Y LG+AFQ++DDVLD + +GK G+D N KPT ++ Sbjct: 198 ACPDLDSDDVR-TLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLM 256 Query: 241 AFQ 243 Q Sbjct: 257 GLQ 259 >gi|57867011|ref|YP_188659.1| geranyltranstransferase [Staphylococcus epidermidis RP62A] gi|293366522|ref|ZP_06613199.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W2(grey)] gi|57637669|gb|AAW54457.1| geranyltranstransferase [Staphylococcus epidermidis RP62A] gi|291319291|gb|EFE59660.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W2(grey)] Length = 293 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 129/239 (53%), Gaps = 11/239 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + +KY + +GGKR+RP++ L T ML + A A+E IHT +L+HDD+ +D+ Sbjct: 30 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 89 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGELR 146 RRGK+ V+G ++L GD LL++AF +V + E +S++ + A G L Sbjct: 90 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTTIEDSVKVSIIKRLSKASGHLG 149 Query: 147 QLSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + LD+ E + L I ++KT L + ++ + IA V+ ++ + L + Sbjct: 150 MVG-GQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 208 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +LG+ FQ+ DD+LD G+ +++GK +G D N K T +L + ++ N +N Sbjct: 209 HLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLGKEGAEEKLNNHQYLAMN 267 >gi|319897071|ref|YP_004135266.1| geranyltranstransferase [Haemophilus influenzae F3031] gi|317432575|emb|CBY80935.1| geranyltranstransferase [Haemophilus influenzae F3031] Length = 296 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 17/242 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 35 EAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------ 143 LRRG + + T++L GD L S AF ++ +T + A + L+L+ LA+G Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALIQI-LAQGAGVQGM 153 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 L +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKRLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND 259 ++ Sbjct: 272 SE 273 >gi|223933610|ref|ZP_03625590.1| Polyprenyl synthetase [Streptococcus suis 89/1591] gi|330833373|ref|YP_004402198.1| polyprenyl synthetase [Streptococcus suis ST3] gi|223897736|gb|EEF64117.1| Polyprenyl synthetase [Streptococcus suis 89/1591] gi|329307596|gb|AEB82012.1| Polyprenyl synthetase [Streptococcus suis ST3] Length = 329 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/244 (33%), Positives = 127/244 (52%), Gaps = 13/244 (5%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLA 68 + +E+V +IL + + + + + GK LR L L A M E + + + A Sbjct: 14 RGLEEVKSIILSEMMVLHPAVTSKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKLYFA 73 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E +H ATL+HDDV+D + RRG AA + N+ ++ GD+LL A+ + K Sbjct: 74 AHLEVLHLATLIHDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLL--AYSSRLFGKGLR 131 Query: 129 ALEA----LSL----VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 LE L L + T+ GEL QL + ++T + YL I+ KTA LF A ++ Sbjct: 132 LLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQLG 191 Query: 181 SLIAG-VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S + G + A +S G LG+AFQL DD++DY+ +V E GK +D +NG T P++ Sbjct: 192 SFVPGQSRKDSSMAFRS-GQALGMAFQLRDDLIDYQLDVAESGKPRLQDIQNGIYTAPLL 250 Query: 240 LAFQ 243 A + Sbjct: 251 FAMR 254 >gi|145629449|ref|ZP_01785247.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 22.1-21] gi|144978292|gb|EDJ88056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 22.1-21] Length = 296 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 17/242 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 35 EAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------ 143 LRRG + + T++L GD L S AF ++ +T + A + L+L+ LA+G Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALIQI-LAQGAGVQGM 153 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 L +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKRLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND 259 ++ Sbjct: 272 SE 273 >gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii] gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii] Length = 327 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 16/228 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-ACAIEFIHTATLLHDDV--VD 86 I + ++Y + +GGKR+RP+L +A + M+ + A A+E IHT +L+HDD+ +D Sbjct: 62 IHEAMRYSLLAGGKRVRPILCIAASEMIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMD 121 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 + LRRGK +G T+VL GD +LS AF + + E + + L Sbjct: 122 NDDLRRGKPTCHKAFGEDTAVLAGDAMLSLAFEHIARCSAGVPAERVVRIVSELGSAVGS 181 Query: 147 Q-LSLSKNLDVTEED----------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 Q L + +D+ E Y+H+ KT L AA ++ G ++ Sbjct: 182 QGLVAGQIVDIACEGKEGVDLDMLRYIHI--HKTGKLLEAAGVCGAIAGGASEEEVGRVR 239 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 SY +G+ FQ+VDD+LD E+GK G+D + K T P +L Q Sbjct: 240 SYSQAVGLLFQVVDDILDVTKSSQELGKTAGKDLISDKTTYPKLLGLQ 287 >gi|148825981|ref|YP_001290734.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittEE] gi|229846704|ref|ZP_04466811.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 7P49H1] gi|148716141|gb|ABQ98351.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittEE] gi|229810193|gb|EEP45912.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 7P49H1] Length = 296 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 17/242 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 35 EAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------ 143 LRRG + + T++L GD L S AF ++ +T + A + L+L+ LA+G Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALIQI-LAQGAGVQGM 153 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 L +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKRLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND 259 ++ Sbjct: 272 SE 273 >gi|59802056|ref|YP_208768.1| hypothetical protein NGO1735 [Neisseria gonorrhoeae FA 1090] gi|240014983|ref|ZP_04721896.1| hypothetical protein NgonD_10150 [Neisseria gonorrhoeae DGI18] gi|240116586|ref|ZP_04730648.1| hypothetical protein NgonPID1_10193 [Neisseria gonorrhoeae PID18] gi|240122052|ref|ZP_04735014.1| hypothetical protein NgonPI_09860 [Neisseria gonorrhoeae PID24-1] gi|260439653|ref|ZP_05793469.1| hypothetical protein NgonDG_00928 [Neisseria gonorrhoeae DGI2] gi|268602255|ref|ZP_06136422.1| geranyltranstransferase [Neisseria gonorrhoeae PID18] gi|291042894|ref|ZP_06568635.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2] gi|293398096|ref|ZP_06642301.1| geranyltranstransferase [Neisseria gonorrhoeae F62] gi|59718951|gb|AAW90356.1| putative geranyltranstransferase [Neisseria gonorrhoeae FA 1090] gi|268586386|gb|EEZ51062.1| geranyltranstransferase [Neisseria gonorrhoeae PID18] gi|291013328|gb|EFE05294.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2] gi|291611359|gb|EFF40429.1| geranyltranstransferase [Neisseria gonorrhoeae F62] Length = 298 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 120/233 (51%), Gaps = 16/233 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + D AIE Sbjct: 20 LLLERFLPSGNEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGAMADAVGQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++L GD L +QAF ++ A Sbjct: 80 IHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT---------EEDYLHVIKSKTAVLFSAALEVSSL 182 L++++ G ++ + +D+ + + +H +K+ A++ +A L ++ Sbjct: 140 QLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLERMHSLKTG-ALIRAAVLLGATA 198 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + ++ L +Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 199 CPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|260583060|ref|ZP_05850842.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae NT127] gi|260093911|gb|EEW77817.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae NT127] Length = 296 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 17/242 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 35 EAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------ 143 LRRG + + T++L GD L S AF ++ +T + A + L+L+ LA+G Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALIQI-LAQGAGVQGM 153 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 L +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKRLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND 259 ++ Sbjct: 272 SE 273 >gi|209517792|ref|ZP_03266627.1| Polyprenyl synthetase [Burkholderia sp. H160] gi|209501738|gb|EEA01759.1| Polyprenyl synthetase [Burkholderia sp. H160] Length = 293 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 118/221 (53%), Gaps = 13/221 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKR+RP+L A + R + A A+E IH +L+HDD+ +DD AL Sbjct: 35 AMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDAL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIETKSQEALE---ALSLVACTLAEG 143 RRGK + + T++LVGD L SQAF + V+ Q +L AL+ + + G Sbjct: 95 RRGKPTVHVKYDEATALLVGDALQSQAFVVLTSDVLGVPQQASLVRELALASGSIGMCGG 154 Query: 144 ELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMNL 201 + L S+ L + + +H + KT L AA+ + +L ++ +L +Y + Sbjct: 155 QAIDLASVGHTLTRPQLETMH--RMKTGALLRAAVRMGALAGEAPDAKALASLDAYAAAV 212 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G+AFQ+VDD+LD + +GK G+D ++GKPT I+ Sbjct: 213 GLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGL 253 >gi|188990958|ref|YP_001902968.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str. B100] gi|167732718|emb|CAP50912.1| geranyltranstransferase [Xanthomonas campestris pv. campestris] Length = 291 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 8/218 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +++ + GGKR+RP+L A+ + + A A+E IH +L+HDD+ +DD AL Sbjct: 34 AMRHAVLGGGKRMRPLLVYASGALFGAEEGSLDAPAVAVELIHAYSLVHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGEL 145 RRG+ + + T++L GD L ++AF ++ E + AL ++L+ A Sbjct: 94 RRGRPTVHIAFDEATAILAGDALQARAFELLAEAPADAALRVGWLQSLASAAGAAGMCGG 153 Query: 146 RQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L + V D L + + KT L AA+ + L G + +Q L ++ LG+A Sbjct: 154 QALDIDATGQVQALDALQRMHALKTGALIRAAVRMGVLTGGAGIADQQRLDAFADALGLA 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 FQ+ DD+LD ++GK G+D K T P +L Sbjct: 214 FQVRDDILDVESSSAQLGKTAGKDAAQSKSTYPALLGM 251 >gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579] gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579] Length = 296 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/258 (31%), Positives = 126/258 (48%), Gaps = 21/258 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 -----ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + K L + E +Y+H K K L A+ ++++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIH--KHKAGKLLEFAVLAGAILSDATEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R K Sbjct: 205 EEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRA----K 260 Query: 251 NFWKSTINDGKISVENLK 268 + + TI + K ++ +L+ Sbjct: 261 DILEETIAEAKGAISSLQ 278 >gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii] gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii] Length = 366 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 16/228 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-ACAIEFIHTATLLHDDV--VD 86 I + ++Y + +GGKR+RP+L +A + M+ + A A+E IHT +L+HDD+ +D Sbjct: 101 IHEAMRYSLLAGGKRVRPILCIAASEMIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMD 160 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---- 142 + LRRGK +G T+VL GD +LS AF + + E + + L Sbjct: 161 NDDLRRGKPTCHKAFGEDTAVLAGDAMLSLAFEHIARCSAGVPAERVVRIVSELGSAVGS 220 Query: 143 -----GELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G++ ++ + +D+ Y+H+ KT L AA ++ G ++ Sbjct: 221 QGLVAGQIVDIACEGKEGVDLDTLRYIHI--HKTGKLLEAAGVCGAIAGGASEEEVGRVR 278 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 SY +G+ FQ+VDD+LD E+GK G+D + K T P +L Q Sbjct: 279 SYSQAVGLLFQVVDDILDVTKSSQELGKTAGKDLISDKTTYPKLLGLQ 326 >gi|291550249|emb|CBL26511.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus torques L2-14] Length = 296 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 129/246 (52%), Gaps = 18/246 (7%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV-- 84 +I + ++Y + +GGKRLRPML + T + + G+ V+ A+E IHT +L+HDD+ Sbjct: 31 VIMEAMEYSLMAGGKRLRPMLMMETYRL--FGGETEVIYPFMAAMEMIHTYSLVHDDLPA 88 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEAL---EALSLVA- 137 +D+ RRG+ +V+G +L GD LL+ AF C E +E+L +A+ ++A Sbjct: 89 MDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETACKAFEQFPEESLRIGQAMRVLAR 148 Query: 138 ----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G++ + S + + EE + + KT L +A+ + +++AG ++ Sbjct: 149 KAGIYGMIGGQVVDVKESGH-QIDEEVLDFIFRLKTGALIESAMMIGAILAGASKEDVKS 207 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 ++ +G+AFQ+ DD+LD ++GK + D +N K T + ++ K + Sbjct: 208 MQKIAGKIGMAFQIQDDILDVTSTTEQLGKPVHSDEKNEKTTYVTLKGIEQAHKDVERMT 267 Query: 254 KSTIND 259 + I++ Sbjct: 268 EEAIDE 273 >gi|68250030|ref|YP_249142.1| geranyltranstransferase [Haemophilus influenzae 86-028NP] gi|145632792|ref|ZP_01788525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 3655] gi|145634984|ref|ZP_01790691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittAA] gi|68058229|gb|AAX88482.1| geranyltranstransferase [Haemophilus influenzae 86-028NP] gi|144986448|gb|EDJ93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 3655] gi|145267850|gb|EDK07847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittAA] Length = 296 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 79/251 (31%), Positives = 132/251 (52%), Gaps = 17/251 (6%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 I S ++ + +KY + GGKR+RP L AT ML A AIE IH +L+HD Sbjct: 26 IESHNALLLEAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHD 85 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 D+ +DD LRRG + + T++L GD L S AF ++ +T + A + L+L+ L Sbjct: 86 DLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALIQI-L 144 Query: 141 AEG----------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQN 188 A+G L +S K + ++E + +H ++KT L AAL++ + + Sbjct: 145 AQGAGVQGMCLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDK 202 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ Sbjct: 203 RLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQK 262 Query: 249 EKNFWKSTIND 259 ++ ++S +++ Sbjct: 263 AQDLYQSALSE 273 >gi|152979918|ref|YP_001352020.1| geranyltranstransferase [Janthinobacterium sp. Marseille] gi|151279995|gb|ABR88405.1| geranyltranstransferase [Janthinobacterium sp. Marseille] Length = 280 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 129/262 (49%), Gaps = 29/262 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y + GGKR+RP+L A + + A A+E IH +L+HDD+ +DD A Sbjct: 21 EAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAVEMIHAYSLVHDDMPCMDDDA 80 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEAL------SLVACT 139 LRRGK + + ++LVGD L SQAF ++ ++ Q A+ L SL C Sbjct: 81 LRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGGLDPVRQLAMVRLLAKASGSLGMCG 140 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV-----RQAL 194 +L + LS +L+ E+ +H +K+ A L VS L+ + QAL Sbjct: 141 GQAIDLASVGLSLSLEELEQ--MHRLKT------GALLRVSVLLGALAGKALSAEETQAL 192 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 SY +G+AFQ+VDDVLD + +GK G+D + KPT IL G ++ + + Sbjct: 193 DSYAAAIGLAFQVVDDVLDATADSATLGKTAGKDAADNKPTYVSIL----GLEQSQALAE 248 Query: 255 STINDGKISVENLKKAFIIMRE 276 ND ++E + +RE Sbjct: 249 KLRNDAHRALEQFGEKARRLRE 270 >gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822] gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis] Length = 303 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/237 (29%), Positives = 119/237 (50%), Gaps = 22/237 (9%) Query: 19 ILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL------LA 68 +L + ++ P + ++Y + GGKR+R +L A G + A Sbjct: 22 VLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAVLVYAAGQACPVNGSTLAVGASMDRAA 81 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 A+E IH +L+HDD+ +DD LRRG+ + + T++L GD L AF ++ Sbjct: 82 AAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFELLAGMPI 141 Query: 127 QEAL-----EALSLVACT--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 AL + L+ A + +A G+ L S+ + L E +H +K T + + ++ Sbjct: 142 APALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMK--TGAMLACSVT 199 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + ++AG ++ RQAL SY +G+AFQ+VDD+LD + +GK G+D + KPT Sbjct: 200 LGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPT 256 >gi|296272185|ref|YP_003654816.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299] gi|296096360|gb|ADG92310.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299] Length = 298 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 10/223 (4%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 + GK LR L L A + + + L +E IH A+LLHDDV+D++ RRG + Sbjct: 30 LATGKMLRSKLILKIAGI----NEESIKLCAIVEMIHAASLLHDDVIDEATTRRGSPSVN 85 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 ++ +T+++ GD L S+AF + + + A +S L+ GE+ + L++ + Sbjct: 86 ALYDAKTAIMFGDVLYSKAFTELSQMNKKVAYN-ISSAVTKLSIGEMMDIDLTQTFNTDY 144 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 YL +I KTA S ++ A + N + YG NLG+AFQ++DD+LD + Sbjct: 145 NLYLDMIYKKTA---SLIEASAASAAILANKDEEKYALYGKNLGLAFQMIDDILDITQDA 201 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTIND 259 +GK DF GK T+P +L QR + K + +K +N+ Sbjct: 202 QTLGKPAMFDFVEGKATIPYLLLHQRLDDKTKLESLFKKELNE 244 >gi|145630745|ref|ZP_01786523.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae R3021] gi|144983627|gb|EDJ91087.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae R3021] Length = 296 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 17/242 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 35 EAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------ 143 LRRG + + T++L GD L S AF ++ +T + A + L+L+ LA+G Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISAEQKLALIQI-LAQGAGVQGM 153 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 L +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKRLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND 259 ++ Sbjct: 272 SE 273 >gi|298370440|ref|ZP_06981756.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314] gi|298281900|gb|EFI23389.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314] Length = 298 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 127/243 (52%), Gaps = 20/243 (8%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R +P + ++Y+ GGKRLRP+L LA + + + + AIE Sbjct: 20 LLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 +H +L+HDD+ +D+ +LRRGK + + T++LVGD L +QAF ++ A Sbjct: 80 VHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRPTGLPAER 139 Query: 132 ALSLVAC--------TLAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +++++ +A G+ L+ + K ++ + + +H +K T L AA + +L Sbjct: 140 QIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLK--TGALIRAAAVLGAL 197 Query: 183 IAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +S VR L +Y LG+AFQ++DDVLD + +GK G+D N KPT ++ Sbjct: 198 ACPDLDSDDVR-TLDNYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLM 256 Query: 241 AFQ 243 Q Sbjct: 257 GLQ 259 >gi|317013686|gb|ADU81122.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori Gambia94/24] Length = 307 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 75/265 (28%), Positives = 142/265 (53%), Gaps = 18/265 (6%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L+ + D +L L +E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLDEKTDAILLDKAFNLCTIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++GN +V++GD S+AF + +K E++ +ALS L+ GE+ + + + + Sbjct: 92 INALFGNFNAVMLGDVFYSKAFFEL--SKMGESIAQALSNAVLRLSRGEIEDVFVGECFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ + + +G++ G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFIEASLKSMAILL---DKDAKMYADFGLHFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAFIIM 274 + +GK DF+ GK TLP +L +++ + E+ S D +E K+ F Sbjct: 207 QDAKTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQGLLISYFKQDSHEIIEWTKEKF--- 263 Query: 275 RENRALVDTEYRAYSYGQKAKDSLR 299 +++ + +T A Y +KA ++++ Sbjct: 264 KQHGIIEETLKIAQVYSKKALEAIK 288 >gi|253752432|ref|YP_003025573.1| polyprenyl synthetase [Streptococcus suis SC84] gi|253754258|ref|YP_003027399.1| polyprenyl synthetase [Streptococcus suis P1/7] gi|253756192|ref|YP_003029332.1| polyprenyl synthetase [Streptococcus suis BM407] gi|251816721|emb|CAZ52363.1| polyprenyl synthetase [Streptococcus suis SC84] gi|251818656|emb|CAZ56491.1| polyprenyl synthetase [Streptococcus suis BM407] gi|251820504|emb|CAR47259.1| polyprenyl synthetase [Streptococcus suis P1/7] gi|292559037|gb|ADE32038.1| Polyprenyl synthetase [Streptococcus suis GZ1] gi|319758838|gb|ADV70780.1| polyprenyl synthetase [Streptococcus suis JS14] Length = 329 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 83/245 (33%), Positives = 130/245 (53%), Gaps = 15/245 (6%) Query: 10 KDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLL 67 + +E+V +IL + + +V+Y + + GK LR L L A M E + + + Sbjct: 14 RGLEEVKSIILSEMMVLHPAVTAKIVEY-VEAPGKYLRAGLCLLFAQMTEGKISRSKLYF 72 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +E +H ATL+HDDV+D + RRG AA + N+ ++ GD+LL A+ + K Sbjct: 73 AAHLEVLHLATLIHDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLL--AYSSRLFGKGL 130 Query: 128 EALEA----LSL----VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 LE L L + T+ GEL QL + ++T + YL I+ KTA LF A ++ Sbjct: 131 RLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQL 190 Query: 180 SSLIAG-VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 S + G + A +S G LG+AFQL DD++DY+ +V E GK +D +NG T P+ Sbjct: 191 GSFVPGQSRKDSSMAFRS-GQALGMAFQLRDDLIDYQLDVAESGKPRLQDIQNGIYTAPL 249 Query: 239 ILAFQ 243 + A + Sbjct: 250 LFAMR 254 >gi|254168815|ref|ZP_04875656.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469] gi|197622252|gb|EDY34826.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469] Length = 350 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/315 (25%), Positives = 151/315 (47%), Gaps = 31/315 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++++ GGKR+R +L + M+ + D + + ++E I + L+HDD++D+S LR Sbjct: 39 EILEEYTLRGGKRIRAILMIVGYKMMGGKNDEIIKASSSLELIQSYLLIHDDIMDESDLR 98 Query: 92 RGKVAARLVW----------------GNQTSVLVGDFLLSQAFCMVIETKSQ-------E 128 RGK ++ G +++ GD L+ A+ M I + S + Sbjct: 99 RGKDTVHKIYEKKHLKNGFGGRPIRFGESMAIIAGD--LANAYAMEILSSSDFPAELKVK 156 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQ 187 A+ L+ + G++ + + EED L + K KTA L + ++AG + Sbjct: 157 AIHKLNEIIEYTGYGQIIDIYSGALDEFKEEDLLLLHKYKTARYTIEGPLALGMILAGKE 216 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + +++Y + +GIAFQL DD+L G E+GK + D GK TL +I A + G+ Sbjct: 217 P---EGIENYAIPVGIAFQLQDDILGLFGSEEEIGKPVTSDLAEGKKTLLIIKALENGSD 273 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL--PDSS 305 ++ + + ++ E L+K I+R +L ++ A ++AKD L+ + D Sbjct: 274 EDRKIIMQALGNPAVTYEQLEKVREIVRRTGSLDYSKNLAKKMVEEAKDYLKGIEVEDEE 333 Query: 306 WKKSLMEVVDFCLQR 320 + L+ + D+ + R Sbjct: 334 MRDFLLWLADYMISR 348 >gi|291435805|ref|ZP_06575195.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672] gi|291338700|gb|EFE65656.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672] Length = 379 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 3/226 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L + +A + V A A+E +H +LLHDD++D RR + V Sbjct: 88 GGKAVRPALAVLSAEVTGAAPQTGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 147 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + +A A L+ + L +G+ + +S V+ Sbjct: 148 HGPAQAILVGDALFALANEVLLELGTVDAGRAARRLTTASRALIDGQAQDISYEHRDRVS 207 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G +L+ YG +LG+AFQ VDD+L G+ Sbjct: 208 VEECLEMEGNKTGALLACASSIGAVLGGADERTADSLEKYGYHLGLAFQAVDDLLGIWGD 267 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 GK D R K +LPV+ A G + D K S Sbjct: 268 PEATGKQTWSDLRQRKKSLPVVAALASGGPASGRLGEILAADAKSS 313 >gi|302541341|ref|ZP_07293683.1| polyprenyl synthetase [Streptomyces hygroscopicus ATCC 53653] gi|302458959|gb|EFL22052.1| polyprenyl synthetase [Streptomyces himastatinicus ATCC 53653] Length = 365 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 3/215 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + V A A+E +H +LLHDD++D RR + V Sbjct: 72 GGKAVRPALALLSAQAAGADPEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 131 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S VT Sbjct: 132 HGPAQAILVGDALFALAGEILLELGTAEAGRATRRLTSATRKLIDGQAQDISYEHRERVT 191 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G + L+ YG +LG+AFQ VDDVL G+ Sbjct: 192 VEECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVDDVLGIWGD 251 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 GK D R K +LPV+ A G + ++ Sbjct: 252 PVSTGKQTWSDLRQRKKSLPVVAALAAGGRASEDL 286 >gi|283769470|ref|ZP_06342366.1| putative geranyltranstransferase [Bulleidia extructa W1219] gi|283103738|gb|EFC05124.1| putative geranyltranstransferase [Bulleidia extructa W1219] Length = 276 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 137/256 (53%), Gaps = 18/256 (7%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 ++ ++Y + + GKR+RP + T + + ACA+E+IHT +L+HDD+ +D Sbjct: 17 VLKKAMEYALMTKGKRIRPQIIFHTLKAFGLQEELGYAYACALEYIHTYSLIHDDLPAMD 76 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACT-- 139 D LRRGK + +G ++L GD LL+++F + + ++ +ALE LS A Sbjct: 77 DDVLRRGKPTVHVSFGEDLAILAGDALLTESFYQLTKNTLSDKQNLKALEVLSSHAGANG 136 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--ALKSY 197 + G++ + + N T+ED +++ KT L ++ E+ ++ A N + Q + + Sbjct: 137 MVLGQV--MDMRTNQFSTQEDIETMLEKKTGRLLESSFELGAIAA---NQLEQLMSFQEA 191 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G +G+AFQ+ DD+L+ E+GK+ D +N K TL ++ ++ K E+ ++ I Sbjct: 192 GKWIGLAFQIQDDLLEVEKTTEELGKS-NSDEKNNKYTLLKLVGLKQAKKLEQTYYCRGI 250 Query: 258 NDGKISVENLKKAFII 273 K S+ NL + ++ Sbjct: 251 ERLK-SIPNLDSSILV 265 >gi|183980313|ref|YP_001848604.1| polyprenyl synthetase IdsB_3 [Mycobacterium marinum M] gi|183173639|gb|ACC38749.1| polyprenyl synthetase IdsB_3 [Mycobacterium marinum M] Length = 329 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--- 127 +E IH TLLHDDV+D + RRG+ VWG ++L+GD L + A + ++ Q Sbjct: 77 VELIHNFTLLHDDVMDGDSTRRGRATVWRVWGVNNAILLGDALHALAIRTLTDSLGQGVA 136 Query: 128 -EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A+ L L G+ + S + VT DYL + KTAVL + A + ++ A Sbjct: 137 VNAITRLEQTCLDLCVGQHQDCSFERCTTVTVPDYLRMAAGKTAVLMACACALGAVSARA 196 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + A++ +G LG+AFQ+VDD++ G+ GK +G D + K TLP+++A Sbjct: 197 DAATVAAVERFGYELGLAFQIVDDLIGIWGDPARTGKPVGSDLASRKATLPIVVAL 252 >gi|294054659|ref|YP_003548317.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221] gi|293613992|gb|ADE54147.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221] Length = 294 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 14/240 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + +GGKRLRP+L LA + + + G + + A AIE +HT TL+HDD+ +D+S L Sbjct: 37 AMRYSMEAGGKRLRPVLVLALSELAD-SGQDPIAAAVAIECLHTYTLIHDDLPSLDNSDL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG+ + + T+VL GD LL+ AF ++ + A+ L+ R+L Sbjct: 96 RRGRPSCHKQFDEPTAVLAGDALLTFAFELLSREYASSPELAVGLIQDLADASGSRRLIG 155 Query: 151 SKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + D+ E Y+H ++KTA L +AAL + Q ++ G +L Sbjct: 156 GQQEDIDNEGKPVDADTLQYIH--ENKTAALLTAALSMGLRFTQPGAQALQLIQKVGFHL 213 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G+ FQ+VDD+LD MGK +G D K T + + + K I K Sbjct: 214 GMTFQIVDDILDATSSAEAMGKPVGNDASADKTTYVALHGIEGAREHAKEHTSKAIAAAK 273 >gi|110677933|ref|YP_680940.1| geranyltranstransferase [Roseobacter denitrificans OCh 114] gi|109454049|gb|ABG30254.1| geranyltranstransferase [Roseobacter denitrificans OCh 114] Length = 289 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 15/221 (6%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAA 97 SGGKRLR L L TA + + + A AIE +H +L+HDD+ +D+ +RRG+ Sbjct: 38 SGGKRLRGFLVLETARLHDIAAGEAIWSATAIEALHAYSLVHDDLPCMDNDDMRRGQPTV 97 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-LSLSKNLDV 156 W + T+VL GD L + AF +V + + E + +A +LA Q + L + LD+ Sbjct: 98 HKKWDDATAVLAGDALQTLAFELVTHPGASASAEVRADLALSLARASGAQGMVLGQALDI 157 Query: 157 TEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 E + + + KT L + + + +A + ALK Y LG+AFQ+ Sbjct: 158 AAETARAPLSLDEITRLQQGKTGALIGWSAQAGARLAQADTA---ALKRYAQALGLAFQI 214 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 DD+LD G+ ++GK +G+D GK T +L R Sbjct: 215 ADDILDVTGDSAQVGKAVGKDASAGKATFVSLLGLDAARAR 255 >gi|256851326|ref|ZP_05556715.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii 27-2-CHN] gi|260660750|ref|ZP_05861665.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii 115-3-CHN] gi|282933229|ref|ZP_06338616.1| geranyltranstransferase [Lactobacillus jensenii 208-1] gi|297206196|ref|ZP_06923591.1| geranyltranstransferase [Lactobacillus jensenii JV-V16] gi|256616388|gb|EEU21576.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii 27-2-CHN] gi|260548472|gb|EEX24447.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii 115-3-CHN] gi|281302733|gb|EFA94948.1| geranyltranstransferase [Lactobacillus jensenii 208-1] gi|297149322|gb|EFH29620.1| geranyltranstransferase [Lactobacillus jensenii JV-V16] Length = 288 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/244 (28%), Positives = 122/244 (50%), Gaps = 11/244 (4%) Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAI 71 ++ + + + S++E ++ Y + +GGKRLRP+L LAT + L + + +AC I Sbjct: 15 IDHYLEQHLSSEIEDKKFSQIMAYSVMAGGKRLRPLLFLATLISLGKEITEKEIRVACGI 74 Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE- 128 E IHT +L+HDD+ +D+ RRG + + WG ++L GD LL + ++ E Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAILAGDALLPMGLEWIASAENAEM 134 Query: 129 -ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS---KTAVLFSAALEVSSLIA 184 A+ A ++ +A G+ + S N D +ED + + KT L A++E++++ A Sbjct: 135 VAVMANAIGPNGMAGGQYLDID-STNNDAVKEDNNFINRMEWLKTGCLIKASVEIATIYA 193 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + R+ L + N G A+Q+ DD++D E GK +D GK +L Sbjct: 194 KADDLSRKKLVDFSANFGRAYQIYDDLVDVVQTSQEAGKATHKDEEEGKNNTLTLLGIDE 253 Query: 245 GTKR 248 K Sbjct: 254 SRKE 257 >gi|328862405|gb|EGG11506.1| hypothetical protein MELLADRAFT_102532 [Melampsora larici-populina 98AG31] Length = 429 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 10/188 (5%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IH A+LLHDDV+D ++ RR +A +GN+ S+L GDFLL++A + S Sbjct: 167 LAEISEMIHVASLLHDDVIDKASSRRSIPSAPHEFGNKLSILAGDFLLARASIGLARLGS 226 Query: 127 QEALEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 E +E +S + L EGEL QL S K+ +YL KTA L + ++++ G Sbjct: 227 LEVVELISSIISNLVEGELMQLNSNGKSNHQIWNEYLEKSYLKTASLMAKTARCATVLGG 286 Query: 186 V--------QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK-NIGEDFRNGKPTL 236 ++ + +G +LGIAFQ++DDVLDY + +GK + G D + G T Sbjct: 287 CGIHQGWEEGEKIKDGVYQFGKHLGIAFQIIDDVLDYTSSASVLGKPSGGSDLKLGIATA 346 Query: 237 PVILAFQR 244 P++ A ++ Sbjct: 347 PILYASEQ 354 >gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553] gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553] Length = 303 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 35/287 (12%) Query: 19 ILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL------LA 68 +L + E++P + ++Y + GGKR+R + A G + A Sbjct: 22 VLDDLMPPAEVLPVRLHEAMRYAVLGGGKRVRAAMVYAAGQACPVSGSVLAIEASLDRAA 81 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 A+E IH +L+HDD+ +D+ LRRG+ + + T++L GD L AF ++ Sbjct: 82 AAVELIHAYSLVHDDLPCMDNDTLRRGRPTTHVQFDEATAMLAGDALQPLAFDLLASMPI 141 Query: 127 QEAL-----EALSLVACT--LAEGE-LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 AL ++L+ A + +A G+ + LS+ +L E +H +K T + + ++ Sbjct: 142 APALIVQATQSLARAAGSQGMAGGQAIDLLSVGHSLSRDELQTMHSMK--TGAMLACSVA 199 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + ++AG ++ RQAL +Y +G+AFQ+VDD+LD + +GK G+D KPT Sbjct: 200 LGGIVAGASSASRQALDAYAQAMGLAFQVVDDILDVTADTASLGKTPGKDAAENKPTYVS 259 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKA---------FIIMRE 276 +L G + F + + ++E L A FI++R+ Sbjct: 260 LL----GLSEARAFAEELRVAAQAALEPLGDAGLRLAQLADFIVLRD 302 >gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] Length = 290 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 124/232 (53%), Gaps = 15/232 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + + Y + +GGKR+RP+L LA A + ++ + CA+E IHT +L+HDD+ +D+ Sbjct: 28 LAESMNYSLSAGGKRIRPVLALAAAHAVGGDCEDILPAVCALELIHTYSLIHDDLPAMDN 87 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT---- 139 RRG++A V+G ++L GD LL+ AF ++ + SQ L A+ VA Sbjct: 88 DDYRRGRLANHKVFGEGQAILAGDALLTYAFELLAQPMSGVDSQRQLRAVREVAQAAGPE 147 Query: 140 -LAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + G++ L K L++ E + +H +K T + A + +++AG +AL SY Sbjct: 148 GMVGGQMLDLEAEEKQLNLAELEQVHRLK--TGAILVVAARLGAILAGGTEEKIEALTSY 205 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +G+AFQ+ DD+LD + +GK + D R K T P ++ G K E Sbjct: 206 AQAIGLAFQIKDDILDLESDSETLGKPVHSDLRQHKSTYPSLMGLA-GAKLE 256 >gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens] Length = 352 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 28/276 (10%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 + ++I + ++Y + +GGKR+RP++ +A M + A AIE IHT +L+HDD+ Sbjct: 82 PETKIIVESMRYSLLAGGKRVRPVMCIAACEMFGGTEAMAMPTAVAIEMIHTMSLIHDDL 141 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV------ 136 +D+ LRRG +++G+ ++L GD LLS +F + E + A +V Sbjct: 142 PAMDNDDLRRGMPTNHVIYGDDVAILAGDALLSTSFEHCAVGSTAEGIPAERIVETIRRL 201 Query: 137 -----ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV----- 186 A LA G++ L V+ E+ + KTA L LEVS V Sbjct: 202 GEAVGAVGLAGGQVMDLECEAKSGVSLEELTWIHTHKTAKL----LEVSVAAGAVLAGAA 257 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ VRQ ++Y ++GIAFQ+ DD+LD +GK G+D K T P ++ Sbjct: 258 KDDVRQC-ETYANDIGIAFQVADDILDVTATSEMLGKTAGKDEDTDKTTYPKLMGLDGAR 316 Query: 247 KREKNFWKSTIND----GKISVENLKKA-FIIMREN 277 + I+ G+ +V + A +I+ R+N Sbjct: 317 AEADRLYSEAIDSLAPYGEKAVPLIAIAKYIVERQN 352 >gi|217033468|ref|ZP_03438898.1| hypothetical protein HP9810_1g82 [Helicobacter pylori 98-10] gi|216944173|gb|EEC23601.1| hypothetical protein HP9810_1g82 [Helicobacter pylori 98-10] Length = 307 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 127/234 (54%), Gaps = 11/234 (4%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E + +ALS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 121 ELIAKALSNAVLRLSRGEIEDVFVGECFNSNKQKYWRILEDKTAHFIEASLKSMAILLDK 180 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +G+N G+AFQ+VDD+LD + +GK DF+ GK TLP +L +++ Sbjct: 181 DAKI---YADFGLNFGMAFQIVDDLLDIIQDAKTLGKPNFSDFKEGKTTLPYLLLYEKLN 237 Query: 247 KREKNFWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + E+ S D +E K+ F ++ + +T A Y +KA ++++ Sbjct: 238 QHEQGLLISYFKQDSHEIIEWTKEKF---KQYGIIEETLKTAQVYSKKALEAIK 288 >gi|297203852|ref|ZP_06921249.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083] gi|197711907|gb|EDY55941.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083] Length = 378 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 3/202 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L + +A + + + A A+E +H +LLHDD++D RR + V Sbjct: 87 GGKAVRPALAVLSAEVTGAAPETGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 146 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S V+ Sbjct: 147 HGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTTATRALIDGQAQDISYEHRDRVS 206 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 207 VEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLEKYGYHLGLAFQAVDDLLGIWGD 266 Query: 218 VNEMGKNIGEDFRNGKPTLPVI 239 + GK D R K +LPV+ Sbjct: 267 PDSTGKQTWSDLRQRKKSLPVV 288 >gi|297190552|ref|ZP_06907950.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC 25486] gi|297150531|gb|EDY61773.2| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC 25486] Length = 372 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 3/208 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + + A A+E +H +LLHDD++D RR + V Sbjct: 81 GGKAVRPALALLSAEAAGAAPEVGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 140 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E+ + EA A L+ + L +G+ + +S VT Sbjct: 141 HGPAQAILVGDALFAVANEVLLESGTVEAGRAARRLTTASRKLIDGQAQDISFEHRERVT 200 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A+ + +++ G L++YG +LG+AFQ VDD+L G+ Sbjct: 201 VEECLEMEGNKTGALLACAVSIGAVLGGADERTADTLEAYGYHLGLAFQAVDDLLGIWGD 260 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 261 PVATGKQTWSDLRQRKKSLPVVAALAAG 288 >gi|304389087|ref|ZP_07371131.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091] gi|304336960|gb|EFM03150.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091] Length = 298 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 14/232 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + E + AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVGQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++L GD L +QAF ++ A Sbjct: 80 IHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSMGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSC 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048] gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048] Length = 297 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 29/262 (11%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 30 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------------- 128 + LRRGK V+G +VL GD LL+ AF +++ + +E Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147 Query: 129 --ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A +VA +A+ E K L + E +Y+H KT L A+ ++++ Sbjct: 148 AKAAGPEGMVAGQVADMEAE----GKRLTINELEYIH--NHKTGKLLEFAVLAGAILSDA 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R Sbjct: 202 TEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRA- 260 Query: 247 KREKNFWKSTINDGKISVENLK 268 K+ + I K S+ +L+ Sbjct: 261 ---KSILEEKIAKAKASISSLQ 279 >gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803] gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803] Length = 296 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 86/266 (32%), Positives = 126/266 (47%), Gaps = 37/266 (13%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 29 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV--- 136 + LRRGK V+G +VL GD LL+ AF M E K A + + LV Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146 Query: 137 --------------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 A AEGEL L + E +Y+H K KT L A+ ++ Sbjct: 147 AKAAGPEGMVGGQVADMEAEGEL--------LTIDELEYIH--KHKTGKLLEFAVLAGAI 196 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++ + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + Sbjct: 197 LSDATEEQEKNLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTV 256 Query: 243 QRGTKREKNFWKSTINDGKISVENLK 268 R K+ + TI K ++ +L+ Sbjct: 257 DRA----KDILEDTIAKAKDAISSLQ 278 >gi|222151415|ref|YP_002560571.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402] gi|222120540|dbj|BAH17875.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402] Length = 290 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 19/247 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D + Y + +GGKR+RP+ L T L + + A+E IHT +L+HDD+ +D+ Sbjct: 32 DSMHYSLSAGGKRIRPLFVLTTIDSLGGNAVDGLSFGVALEMIHTYSLIHDDLPAMDNDD 91 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRGK+ + T++L GD LL+ +F M+ E K ++ L L++ + + Sbjct: 92 YRRGKLTNHKHFDEATAILAGDALLTDSFRMITEGKFDADIK-LPLISLLSEAAGSKGMV 150 Query: 150 LSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + LD+ E V KT L AA + +I + + Q L G N+G Sbjct: 151 YGQMLDMEGEHQALELNQMEQVHSYKTGELIRAAFVAAGIIMKLTDEKIQLLDQIGRNVG 210 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST------ 256 + FQ+ DD+LD G E+GK +G D N K T +L ++ K + T Sbjct: 211 LMFQIQDDILDVEGSFEEIGKPVGSDVENDKSTYVSLLGLEQSKALLKEKFDHTEKLVQA 270 Query: 257 ---INDG 260 INDG Sbjct: 271 LRPINDG 277 >gi|194099628|ref|YP_002002759.1| IspA [Neisseria gonorrhoeae NCCP11945] gi|239999827|ref|ZP_04719751.1| hypothetical protein Ngon3_10168 [Neisseria gonorrhoeae 35/02] gi|240017431|ref|ZP_04723971.1| hypothetical protein NgonFA_09768 [Neisseria gonorrhoeae FA6140] gi|240081573|ref|ZP_04726116.1| hypothetical protein NgonF_09730 [Neisseria gonorrhoeae FA19] gi|240118810|ref|ZP_04732872.1| hypothetical protein NgonPID_10204 [Neisseria gonorrhoeae PID1] gi|240124349|ref|ZP_04737305.1| hypothetical protein NgonP_10505 [Neisseria gonorrhoeae PID332] gi|240129023|ref|ZP_04741684.1| hypothetical protein NgonS_10439 [Neisseria gonorrhoeae SK-93-1035] gi|268595637|ref|ZP_06129804.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02] gi|268597669|ref|ZP_06131836.1| geranyltranstransferase [Neisseria gonorrhoeae FA19] gi|268604521|ref|ZP_06138688.1| geranyltranstransferase [Neisseria gonorrhoeae PID1] gi|268682976|ref|ZP_06149838.1| geranyltranstransferase [Neisseria gonorrhoeae PID332] gi|268687403|ref|ZP_06154265.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035] gi|193934918|gb|ACF30742.1| IspA [Neisseria gonorrhoeae NCCP11945] gi|268549026|gb|EEZ44444.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02] gi|268551457|gb|EEZ46476.1| geranyltranstransferase [Neisseria gonorrhoeae FA19] gi|268588652|gb|EEZ53328.1| geranyltranstransferase [Neisseria gonorrhoeae PID1] gi|268623260|gb|EEZ55660.1| geranyltranstransferase [Neisseria gonorrhoeae PID332] gi|268627687|gb|EEZ60087.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035] gi|317165116|gb|ADV08657.1| IspA [Neisseria gonorrhoeae TCDC-NG08107] Length = 298 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 120/233 (51%), Gaps = 16/233 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + D AIE Sbjct: 20 LLLERFLPSGNEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++L GD L +QAF ++ A Sbjct: 80 IHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT---------EEDYLHVIKSKTAVLFSAALEVSSL 182 L++++ G ++ + +D+ + + +H +K+ A++ +A L ++ Sbjct: 140 QLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLERMHSLKTG-ALIRAAVLLGATA 198 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + ++ L +Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 199 CPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|164661701|ref|XP_001731973.1| hypothetical protein MGL_1241 [Malassezia globosa CBS 7966] gi|159105874|gb|EDP44759.1| hypothetical protein MGL_1241 [Malassezia globosa CBS 7966] Length = 450 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 135/307 (43%), Gaps = 72/307 (23%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IH A+LLHDDV+D S LRRG +A +GN+ S+L GDFLL +A + + Sbjct: 141 LAEITEMIHVASLLHDDVIDASPLRRGAPSAPSTFGNKLSILGGDFLLGRASIALARLRD 200 Query: 127 QEALEALSLVACTLAEGELRQLSL--SKNLDVTE-------------------------- 158 E E +S V L EGE+ QL S+ + VT+ Sbjct: 201 PEVTELMSTVIANLVEGEVMQLKATDSEQVPVTDVQSARPSNEVMERFWFAYDQGSSSAM 260 Query: 159 -----------EDYLHVIKSKTAVLFSAALEVSSLIAGVQN-----------------SV 190 E YL KTA L + + ++++ G +V Sbjct: 261 STPGAPNALLFEFYLQKTYLKTASLIAKSARSATVLGGCGTWSNQQSDMTPQQRADAATV 320 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK-NIGEDFRNGKPTLPVILAFQR----- 244 A ++G N+GIAFQLVDD+LD+ GK + G D + G T PV+ A+Q+ Sbjct: 321 CDAAYTFGRNVGIAFQLVDDMLDFHATTEAFGKPSGGADLKLGLATAPVLYAWQQYPDSP 380 Query: 245 -GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 GT ++ F + ++++A ++ ++ + T A + A+ +L LP Sbjct: 381 LGTMVQRRFSEPG---------DVEQALSLVHKSEGMQRTAALARYHADVAQHALSMLPP 431 Query: 304 SSWKKSL 310 S + +L Sbjct: 432 SDARAAL 438 >gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50] gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50] Length = 303 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 22/237 (9%) Query: 19 ILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL------LA 68 +L + ++ P + ++Y + GGKR+R L A G + A Sbjct: 22 VLDELLPGADIAPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVGASMDRAA 81 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 A+E IH +L+HDD+ +DD LRRG+ + + T++L GD L AF ++ Sbjct: 82 AAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFELLAGMPI 141 Query: 127 QEAL-----EALSLVACT--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 AL + L+ A + +A G+ L S+ + L E +H +K T + + ++ Sbjct: 142 APALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMK--TGAMLACSVT 199 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + ++AG ++ RQAL SY +G+AFQ+VDD+LD + +GK G+D + KPT Sbjct: 200 LGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPT 256 >gi|51892982|ref|YP_075673.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum IAM 14863] gi|51856671|dbj|BAD40829.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum IAM 14863] Length = 297 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 16/218 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKRLRP+LT+A + + + + ACA+E IHT +L+HDD+ Sbjct: 35 EAMRYSLLAGGKRLRPILTIAASELFGLEAADVMPGACALEMIHTYSLIHDDLPCMDDDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---------- 139 LRRG+ V+G +VL GD LL+QAF ++ E + + V Sbjct: 95 LRRGRPTCHKVYGEAMAVLAGDALLTQAFALMAEQAAVPRVGPARAVRAAAELAHAAGAE 154 Query: 140 -LAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + G++ L+ +E L I S KT LF AA+ + ++AG L Y Sbjct: 155 GMVGGQVEDLAWEGRQ--ADEPQLRRIHSLKTGALFRAAVRMGGILAGAGEEDLDRLGRY 212 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + G+AFQ+ DDVLD G+ GK +G D R K T Sbjct: 213 ATHFGLAFQIWDDVLDVTGDAALTGKGVGRDARLDKST 250 >gi|257472035|pdb|3IPI|A Chain A, Crystal Structure Of A Geranyltranstransferase From The Methanosarcina Mazei Length = 295 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/246 (29%), Positives = 127/246 (51%), Gaps = 11/246 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V+++ SGGKR+RP++ L + + + A A+E H+A+L+HDD++D +RR Sbjct: 34 VEHVCHSGGKRIRPIILLLVSEICSGSYSRSLNAALAVEXXHSASLIHDDLLDQGLVRRN 93 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 +A +G ++L GD+L++++ I ++ ++ AEGE+ L L ++ Sbjct: 94 LPSAPEKFGPSGALLCGDYLIAKSIAF-ISPYGEKVIQDFGKAGXDXAEGEVLDLKL-ED 151 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 E DY I KTA LF+ + + + G + + + +G LG A+Q+VDD+L+ Sbjct: 152 ESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDDILE 211 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 + EV E G++ + TLP I + + T +E+ KS I+ K+ V K+ Sbjct: 212 FL-EVVE-----GKESKFTSETLPHI--YXKSTSKEEALKKS-IDCVKLHVAAAKETLET 262 Query: 274 MRENRA 279 RE A Sbjct: 263 FRECPA 268 >gi|88859185|ref|ZP_01133826.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas tunicata D2] gi|88819411|gb|EAR29225.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas tunicata D2] Length = 296 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/262 (27%), Positives = 137/262 (52%), Gaps = 21/262 (8%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRR 92 +Y + +GGKR+RP + T + D+ L+A AIE IH+ +L+HDD+ LRR Sbjct: 37 RYSLLNGGKRMRPCMVYVTGEIFGANPDDLDLVAAAIECIHSYSLVHDDLPAMDDDDLRR 96 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACTLAEGELRQLSL 150 G + + T++L GD L + AF ++ +K + A + ++L+A + LR + Sbjct: 97 GMPTCHIAYDEATAILAGDALQTFAFEILSSSKFKTINAQQQVALIANLASASGLRGMCG 156 Query: 151 SKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSYGMN 200 + LD+ T+ + +H +K T L ++A+ + ++ A + Q LK +G N Sbjct: 157 GQALDIAATNCAINLTQLEQIHQLK--TGALLTSAILMGAICAPKTTPEILQNLKIFGEN 214 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND- 259 +G+AFQ+ DD+LD G+ +GK G D + K T P +L ++ + + +++ +N Sbjct: 215 IGLAFQVQDDILDIEGDTAVLGKPQGSDLQANKSTYPSLLGLEQAKLKSQQLYENALNAL 274 Query: 260 GKISVENLK----KAFIIMREN 277 +I + + A+I+ R++ Sbjct: 275 AQIPADTTQLAQLAAYIVSRDH 296 >gi|323488929|ref|ZP_08094166.1| geranyltranstransferase [Planococcus donghaensis MPA1U2] gi|323397321|gb|EGA90130.1| geranyltranstransferase [Planococcus donghaensis MPA1U2] Length = 293 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 124/253 (49%), Gaps = 34/253 (13%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLH- 81 IPD +K Y + +GGKR+RP+L L A++ E G H + +A AIE IHT +L+H Sbjct: 27 IPDSLKESMHYSLQAGGKRIRPILLL--AVLHEMTGKEHPDALKVAAAIEMIHTYSLIHD 84 Query: 82 -DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---ETKSQEALEALSLVA 137 +DD LRRG V+G ++L GD LL+ +F +V S + + + L++ Sbjct: 85 DLPSMDDDDLRRGMPTNHKVFGEAVAILAGDALLTYSFGVVARLEHVSSDDKVRLIDLMS 144 Query: 138 CTLA------------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + EGE +QL L E+ V + KT L + ++ ++A Sbjct: 145 VSAGAEGMVGGQVLDIEGEEKQLQL--------EELEQVHRLKTGALLTFSILAGGILAQ 196 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 N AL +G +LG+AFQ+ DD+LD G E+GK G+D + K T P +L + Sbjct: 197 ATNDEIIALSQFGQHLGLAFQIQDDILDVTGTSQELGKTAGKDESSEKSTYPSLLTLPKA 256 Query: 246 TKREKNFWKSTIN 258 ++ IN Sbjct: 257 KEKLDYHASEAIN 269 >gi|261839097|gb|ACX98862.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori 52] Length = 307 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 75/265 (28%), Positives = 140/265 (52%), Gaps = 18/265 (6%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVA 96 K LR L LA +L+ + D +L L +E I TA+LLHDDV+D + +RR + Sbjct: 35 SKMLRSKLMLA---LLDEKTDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPS 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLD 155 ++G+ +V++GD S+AF + +K E + + LS L+ GE+ + + + + Sbjct: 92 INALFGDFNAVMLGDVFYSKAFFEL--SKMGELIAKTLSNAVLRLSRGEIEDVFVGECFN 149 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ Y +++ KTA A+L+ +++ N + +G+N G+AFQ++DD+LD Sbjct: 150 SDKQKYWRILEDKTAHFIEASLKSMAILL---NKDAKIYADFGLNFGMAFQIIDDLLDIT 206 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAFIIM 274 + +GK DF+ GK TLP +L +++ + E+ S D +E K+ F Sbjct: 207 QDAKTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQGLLISYFKQDSHEIIEWTKEKF--- 263 Query: 275 RENRALVDTEYRAYSYGQKAKDSLR 299 ++ + +T A +Y +KA ++++ Sbjct: 264 KQYGIIEETLKTAQAYSKKALEAIK 288 >gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa] Length = 371 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 11/226 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RPML +A ++ + ACA+E +HT +L+HDD+ +D+ Sbjct: 107 IQESMRYSLLAGGKRIRPMLCIAACELVGGDESTAMPAACAVEMVHTMSLMHDDLPCMDN 166 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-----SLVACTLAE 142 LRRGK V+ +VL GD +L+ +F V E + L C E Sbjct: 167 DDLRRGKPTNHKVFTEDVAVLAGDAMLAFSFEHVASLTKGVCSERIVRVIYELAKCVGCE 226 Query: 143 GELRQLSL---SKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G + + S+ +D ++L I +KTA L ++ + +++ G + + L+++ Sbjct: 227 GLVAGQVVDICSEGMDEVGLEHLEFIHLNKTAALLEGSVVLGAILGGGSDEEVEKLRNFA 286 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+ FQ+VDD+LD E+GK G+D K T P ++ ++ Sbjct: 287 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGIEK 332 >gi|90022863|ref|YP_528690.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40] gi|89952463|gb|ABD82478.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40] Length = 295 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 23/285 (8%) Query: 13 EKVNFLILKRICS----DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 E N L+ +R+ + ++I + ++Y + GGKR+RP+L A A A Sbjct: 14 EHTNGLLEERLIGLKHYNTDLI-EAMRYSLLLGGKRVRPVLVYAAAYATGGISAAADDCA 72 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 CAIE IHT +L+HDD+ +DD ALRRG+ + + T++L GD L QAF + ++ Sbjct: 73 CAIEAIHTYSLIHDDLPAMDDDALRRGQPTCHIAYSEATAILAGDALQCQAFEWLANSQH 132 Query: 127 QEALEALSLV--------ACTLAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 A AL + A + G+ L+ + K++D+ + +H + KT L SA++ Sbjct: 133 MPASAALQAIAALAKASGASGMVLGQAIDLAAVDKSVDLQHLETMH--QHKTGALISASV 190 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 E+ ++ AG + L+ Y +G+AFQ+ DD+LD +GK G D KPT Sbjct: 191 EMGAIAAGATPTQTAQLRQYASAIGLAFQVQDDILDVTANTATLGKEAGADAERNKPTYV 250 Query: 238 VILAFQRGTKREKNFWK---STINDGKISVENLKK--AFIIMREN 277 +L + + ++I D + L++ +I+ R++ Sbjct: 251 SLLGLDGAKHKASELLQQALASIKDFDERADILRQLATYIVQRDH 295 >gi|298694804|gb|ADI98026.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED133] Length = 293 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 124/216 (57%), Gaps = 11/216 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 36 YSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVACTLAEGELRQLSLSK 152 K+ V+G T++L GD LL++AF ++ + + + ++ L ++A G + + + Sbjct: 96 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVG-GQ 154 Query: 153 NLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 LD+ E + L +I K+KT L + A+ ++ IA V ++ ++ L+SY +LG+ F Sbjct: 155 MLDMQSEGQPIDLEILEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMMF 214 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 Q+ DD+LD G+ ++GK +G D N K T +L Sbjct: 215 QIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 250 >gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens] Length = 332 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 77/245 (31%), Positives = 121/245 (49%), Gaps = 15/245 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E I + ++Y + +GGKR+RP L +A ++ D + ACA+E +HT +L+HDD+ Sbjct: 66 EKIREAMRYSLLAGGKRVRPALCIAACELVGGNEDLAMPSACAMEMVHTMSLIHDDLPCM 125 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVAC------ 138 LRRGK +G T+VL GD LL+ AF + T A L ++A Sbjct: 126 DDDDLRRGKPTNHKAFGEDTAVLAGDALLAYAFEHIARATTGVPADRVLRVIAHLGKAVG 185 Query: 139 --TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G++ ++ + V E +V KTAVL +A+ +++ G L + Sbjct: 186 SEGLVAGQIVDIASEGDRTVGLEILEYVHTHKTAVLLESAVVSGAILGGASEDEISRLSN 245 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y N+G+ FQ+VDD+LD E+GK G+D K T P +L G ++ + F + Sbjct: 246 YARNVGLLFQVVDDILDVTKSSAELGKTAGKDLVADKATYPKLL----GLEKSRAFAEEL 301 Query: 257 INDGK 261 I K Sbjct: 302 IRKAK 306 >gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus] Length = 300 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 118/232 (50%), Gaps = 17/232 (7%) Query: 20 LKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L R+ E+ P ++Y + GGKR+RP+L A + + A A+E IH Sbjct: 23 LNRLLPPAEVAPQRLHQAMRYAVLGGGKRVRPLLCYAAGEVSGAELERLSTAAAALELIH 82 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA---- 129 +L+HDD+ +DD LRRGK + + T++L GD L S AF ++ E + ++ Sbjct: 83 VYSLVHDDLPCMDDDVLRRGKPTCHVEYDEATALLAGDSLQSLAFQLLAEYRVADSPQTQ 142 Query: 130 ---LEALSLVACT--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 LE L+ A + +A G+ L + K L + E +++H+ K+ + S L + Sbjct: 143 LRMLEHLARAAGSRGMAGGQAIDLEATGKTLTLPELEFMHIHKTGALIRASVILGANCGR 202 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A + + L + +G+AFQ+VDDVLD + +GK G+D R GKPT Sbjct: 203 ALASKDMDR-LDHFAKRIGLAFQVVDDVLDAQSTTATLGKTAGKDARQGKPT 253 >gi|296113743|ref|YP_003627681.1| geranyltranstransferase [Moraxella catarrhalis RH4] gi|295921437|gb|ADG61788.1| geranyltranstransferase [Moraxella catarrhalis RH4] gi|326562092|gb|EGE12420.1| geranyltranstransferase [Moraxella catarrhalis 7169] gi|326565728|gb|EGE15891.1| geranyltranstransferase [Moraxella catarrhalis 12P80B1] gi|326566295|gb|EGE16447.1| geranyltranstransferase [Moraxella catarrhalis 103P14B1] gi|326568317|gb|EGE18397.1| geranyltranstransferase [Moraxella catarrhalis BC7] gi|326574560|gb|EGE24500.1| geranyltranstransferase [Moraxella catarrhalis O35E] gi|326576140|gb|EGE26055.1| geranyltranstransferase [Moraxella catarrhalis CO72] Length = 348 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 79/244 (32%), Positives = 121/244 (49%), Gaps = 21/244 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA----------CAIEFIHTA 77 E + +Y + +GGKR+RP+L L+T L L G L A+E IH+ Sbjct: 75 EPLNKACRYAMSNGGKRVRPLLVLSTFLTLIKTGHQTDDLTKKIQMLFRAMMAVELIHSY 134 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE-ALEALS 134 +L+HDD+ +DD ALRRG+ +V+G ++L GD L S AF ++ E + A +A++ Sbjct: 135 SLIHDDLPCMDDDALRRGQPTCHIVYGEDVALLAGDALQSIAFEVLFECYDKNSADDAIA 194 Query: 135 LVACTLAEGELRQLSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQ 187 L R++ + LD+ E D L I + KT L AA+ + ++ A VQ Sbjct: 195 YKLAKLLSCRARRMVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICADVQ 254 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 LK Y +G+AFQ+ DDVLD + +GK G D + K T +L +G + Sbjct: 255 TDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGKPAGSDEKLEKSTYVKLLGV-KGAQ 313 Query: 248 REKN 251 N Sbjct: 314 EYAN 317 >gi|169824537|ref|YP_001692148.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328] gi|167831342|dbj|BAG08258.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328] Length = 269 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 124/244 (50%), Gaps = 16/244 (6%) Query: 20 LKRICSDVEMIPDVVKY-LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 LK + + I + +KY L+ G KRLRP+L L T M + A +IE IH + Sbjct: 14 LKDLSFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNESISEPMNYALSIELIHNYS 73 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALS 134 L+HDD+ +D+ RRGK+ +G +VLVGD LL+ +F ++ E+ E A+ A Sbjct: 74 LVHDDLECMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYSFEVLSESIKNEVDAMCANY 133 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 +V + G +R L + ++E++ + + KT L A+ + +++ V ++ L Sbjct: 134 IVKKSGCFGMIRGQLLDIDSKISEDNIIEIYDKKTCNLLKASTVSAGILSKVDHTTLLKL 193 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 ++Y NLG+AFQ++DD++DY D + K T I ++G ++ + Sbjct: 194 ENYAFNLGMAFQIIDDIMDYEN-----------DIKINKKTYVTIFGKEKGIYDANDYSQ 242 Query: 255 STIN 258 I+ Sbjct: 243 KAID 246 >gi|82751126|ref|YP_416867.1| geranyltranstransferase [Staphylococcus aureus RF122] gi|258423175|ref|ZP_05686068.1| geranyltranstransferase [Staphylococcus aureus A9635] gi|82656657|emb|CAI81083.1| geranyltranstransferase [Staphylococcus aureus RF122] gi|257846625|gb|EEV70646.1| geranyltranstransferase [Staphylococcus aureus A9635] Length = 293 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 124/216 (57%), Gaps = 11/216 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 36 YSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVACTLAEGELRQLSLSK 152 K+ V+G T++L GD LL++AF ++ + + + ++ L ++A G + + + Sbjct: 96 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVG-GQ 154 Query: 153 NLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 LD+ E + L +I K+KT L + A+ ++ IA V ++ ++ L+SY +LG+ F Sbjct: 155 MLDMQSEGQPINLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMMF 214 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 Q+ DD+LD G+ ++GK +G D N K T +L Sbjct: 215 QIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 250 >gi|332704078|ref|ZP_08424166.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay] gi|332554227|gb|EGJ51271.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay] Length = 298 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 116/220 (52%), Gaps = 11/220 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + +GGKRLRP+L L A + + + A ++E IHT +L+HDD+ +D+ LR Sbjct: 38 MEYSLLAGGKRLRPVLCLKWAKLCGLDMEKAMPFAASLELIHTYSLIHDDLPAMDNDDLR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEALSLVACTLAEGELRQLSL 150 RGK + + T++L GD LL++AF ++ + +S A + + A + Sbjct: 98 RGKPSNHKQFDEATAILAGDGLLTEAFSLMAQAAESLPAERVVCAMKAVAAAAGAGGMVG 157 Query: 151 SKNLDVTEE-------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + LD+ D L + + KT L A +++AG + SV + +YG +G Sbjct: 158 GQALDMEYTGKAGISLDQLQTMHAMKTGALIRVACLSGAMLAGSKASVLEKASTYGAAIG 217 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AFQ+ DD+LD G E+GK +G D + GK T P ++ Sbjct: 218 VAFQIADDILDVVGNEQEIGKPVGSDEQAGKNTYPSLVGL 257 >gi|302336334|ref|YP_003801541.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Olsenella uli DSM 7084] gi|301320174|gb|ADK68661.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Olsenella uli DSM 7084] Length = 355 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 10/296 (3%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 + SGGKR RP L L + + + A IE +A L+HDD+ D+ LRRG+ Sbjct: 60 FVASGGKRTRPALVLLGCEAVGGDVERALSSAAGIEHFQSAALIHDDIADEGELRRGEPC 119 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQEALEALSLVACTLAEGELRQLSL 150 L G ++ GD + + F V+E T L L+ + EG+ L Sbjct: 120 TYLTEGLGVAINTGDLGIVRTFADVLEDDALDPTTKLRVLAELAQMEQRTVEGQALDLGW 179 Query: 151 SKN--LDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 ++ DV+ DYL + + KTA S+ L + ++ G + AL S+GM+ G+AFQL Sbjct: 180 VRDGRWDVSTSDYLRMARHKTAFYSASSPLSIGAICGGGSSGQVGALGSFGMDAGLAFQL 239 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 DD+L+ G+ GK+ D GK T+ V + +R +++ + ++ L Sbjct: 240 QDDLLNLVGDATAQGKDFRSDITEGKRTMVVAWSLERLEGQDREELVALLSAHTTDPTQL 299 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME-VVDFCLQRLN 322 +A +MR+ A+ A + AK L + + +++ + DF ++RL Sbjct: 300 ARAVGLMRDCGAIDAVGGYARALADHAKGELDGMDFAGHAVEVLDSMADFFVERLG 355 >gi|56551751|ref|YP_162590.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|241762408|ref|ZP_04760487.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56543325|gb|AAV89479.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|241373095|gb|EER62744.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 298 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 117/238 (49%), Gaps = 12/238 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP+L +AT + + + + AIE IH +L+HDD+ +D+ Sbjct: 36 EAMRYAAIGGGKRLRPLLVVATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTLAE 142 LRRGK + + ++VL GD L + AF ++ E K E ++AL++ + Sbjct: 96 LRRGKPTVHKAFDDASAVLSGDALQALAFEILSEEKIHTDPHVRLELIQALAIASGKDGM 155 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKS---KTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + L+ D + + KT LF LE +++ +R LK+Y Sbjct: 156 VGGQAIDLAAETSTVPFDLPTITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYAR 215 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD++D G+ GK +G+D GK T +L ++ + + I Sbjct: 216 DIGLAFQIADDLIDAEGDEAVAGKAVGKDAAAGKATFLSLLGLEKARSQAQALVDQAI 273 >gi|163816790|ref|ZP_02208153.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759] gi|158448047|gb|EDP25042.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759] Length = 313 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/249 (29%), Positives = 130/249 (52%), Gaps = 17/249 (6%) Query: 27 VEMIPDVV----KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 VE P V Y + +GGKRLRPML T ML D AIE IHT +L+HD Sbjct: 43 VEGFPRTVCEAMAYSVEAGGKRLRPMLMEETYRMLGGSTDVVKPFMAAIEMIHTYSLIHD 102 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMV--IETKSQEALEALSL 135 D+ +D+ RRG+ + +V+G ++L GD LL+ A+ C ++ +++ EAL + Sbjct: 103 DLPALDNDDYRRGRQTSHVVFGEAMAILAGDALLNYAYETACKAFDLDEDARKVSEALRI 162 Query: 136 VA-----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +A + G++ + ++ +T E +V ++KT L A++ + +++AG + Sbjct: 163 LARKPGVYGMLGGQVVDVEMTGRT-LTREQLEYVYENKTGALIEASMMIGAVLAGADSEQ 221 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +A++ ++G+AFQ+ DD+LD G+ +GK D NGK T I ++ + + Sbjct: 222 VEAVEKIASDIGMAFQVQDDILDVCGDSMVLGKPTLSDEENGKITYVTIHGIEKSRQYVR 281 Query: 251 NFWKSTIND 259 + + + + Sbjct: 282 DLSERAVRE 290 >gi|212703021|ref|ZP_03311149.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098] gi|212673609|gb|EEB34092.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098] Length = 298 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 117/227 (51%), Gaps = 12/227 (5%) Query: 28 EMIPDVVKYLIFS---GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 EM P + + +++S GGKRLRP+L L+ A + + ++ + A AIE +HT +L+HDD+ Sbjct: 31 EMPPRLRESMLYSLQAGGKRLRPVLCLSCAALCGLKAEDVLPFASAIEMVHTYSLIHDDL 90 Query: 85 VDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLVA--- 137 LRRGK + + T++L GD LL+ AF + +E + + L A++ A Sbjct: 91 PAMDDDDLRRGKPSNHKAFDEATAILAGDALLTDAFAHMCRVELPAGQVLRAMAEFARAA 150 Query: 138 --CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + G+ + + V+ + + KT L A+ +L+AG + V + + Sbjct: 151 GSSGMVGGQEWDMLYTGLPPVSMAELRRMHAMKTGALLRASCVCGALLAGAADDVCERIG 210 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 YG LG+AFQ+ DD+LD + +GK G D GK T P ++ Sbjct: 211 RYGAALGVAFQIADDILDVVSDTATLGKPAGSDAEQGKNTYPALVGL 257 >gi|254674120|emb|CBA09904.1| geranyltranstransferase [Neisseria meningitidis alpha275] Length = 298 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 14/232 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + D AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G T++L GD L +QAF ++ A Sbjct: 80 IHVYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSC 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|317010521|gb|ADU84268.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori SouthAfrica7] Length = 307 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 127/234 (54%), Gaps = 11/234 (4%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E++ + LS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 121 ESIAQILSNAVLRLSRGEIEDMFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILL-- 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N + +G++ G+AFQ++DD+LD + +GK DF+ GK TLP +L +++ Sbjct: 179 -NKDAKMYADFGLHFGMAFQIIDDLLDITQDATTLGKPNFSDFKEGKTTLPYLLLYEKLN 237 Query: 247 KREKNFWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + E+ S D +E K+ F ++ + +T A Y KA +S++ Sbjct: 238 ENEQGLLISYFKQDSDEIIEWTKEKF---KQYAIIEETLKIAQVYSNKALESIK 288 >gi|317132180|ref|YP_004091494.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3] gi|315470159|gb|ADU26763.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3] Length = 296 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 16/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y +GGKR+RPML L M + + + ACA+E IHT +L+HDD+ Sbjct: 34 EAMRYSAMAGGKRVRPMLVLEFCRMCGGKEEQALPFACAVEMIHTYSLIHDDLPCMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETK--SQEALEALSLVA------ 137 RRG+ + + + T++L GD LLS AF C +++ +Q AL A+ L+A Sbjct: 94 FRRGRPSCHVQYDEATALLAGDALLSLAFETGLCNNMQSGVLAQNALRAMGLLAKASGGQ 153 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + + LS +++ + + +H + KT + AA ++AG + QA +Y Sbjct: 154 GMVGGQMIDLLSEGQHIPLELLETMH--RGKTGAMIRAAAAGGCILAGADETRVQAADAY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+AFQ+VDD+LD G +GK G D N K T L + Sbjct: 212 AAKLGLAFQIVDDILDVTGNSQTLGKPAGSDVGNRKSTYVTHLGLE 257 >gi|260588126|ref|ZP_05854039.1| geranyltranstransferase [Blautia hansenii DSM 20583] gi|331082306|ref|ZP_08331432.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541653|gb|EEX22222.1| geranyltranstransferase [Blautia hansenii DSM 20583] gi|330400792|gb|EGG80393.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium 6_1_63FAA] Length = 296 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 115/225 (51%), Gaps = 26/225 (11%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + V Y + +GGKRLRP+ +L G+ A+E +HT +L+HDD+ +D+ Sbjct: 32 MAEAVNYSMRAGGKRLRPVFMREAYQILGGEGEIIEPFMAALEMVHTHSLIHDDLPALDN 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--------ETKSQEALEALSLVACT 139 RRGK +V+G ++L GD LL+ A+ E + Q +AL ++A Sbjct: 92 DEFRRGKQTTHIVFGEAAAILAGDALLNYAYETAFSAFDMAKDEAELQRVAKALKVLAQK 151 Query: 140 LAEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ + + +DV + DY++ ++KT+ L AAL V ++AG + Sbjct: 152 TG---IKGMLGGQGVDVENDGKPLEKQLLDYIY--ENKTSALIEAALMVGGILAGATDI- 205 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L+ G +GIAFQ+ DD+LD E+GK IG D +N K T Sbjct: 206 -EKLEQIGSKIGIAFQIQDDILDVISSAEELGKPIGSDEKNNKTT 249 >gi|221195086|ref|ZP_03568142.1| bifunctional short chain isoprenyl diphosphate synthase [Atopobium rimae ATCC 49626] gi|221184989|gb|EEE17380.1| bifunctional short chain isoprenyl diphosphate synthase [Atopobium rimae ATCC 49626] Length = 365 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 109/214 (50%), Gaps = 11/214 (5%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGKR+RP L L + + + +ACAIE +A L+HDD+ D S LRRG+ Sbjct: 60 TGGKRVRPALVLLATQAVHGDVEAALPVACAIEDFQSAALIHDDIADKSELRRGEPCLYR 119 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA------EGELRQLSLSKN 153 G ++ VGD L + + + L L+ ++ EG+ L ++ Sbjct: 120 RLGTGLAINVGDAALVHTIGRICHGNTYDEATRLRLIDALISMQEHTLEGQALDLGWTQE 179 Query: 154 --LDVTEEDYLHVIKSKTAVLFSAA--LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 D+T ++YL + SKTA +SAA L +++ G R ALK++G+ G+AFQL D Sbjct: 180 NRWDITPDEYLFMATSKTA-YYSAAYPLLCGAIVGGGTAEQRSALKAFGLKAGLAFQLQD 238 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 D+L+ G+ GK+ D GK TL V+ A + Sbjct: 239 DLLNLVGDAKTQGKDFRSDITEGKRTLLVVKAIE 272 >gi|190575335|ref|YP_001973180.1| putative geranyltranstransferase [Stenotrophomonas maltophilia K279a] gi|190013257|emb|CAQ46891.1| putative geranyltranstransferase [Stenotrophomonas maltophilia K279a] Length = 292 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 16/222 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKR+RP+L A+ + + ++ A ++E IH +L+HDD+ +DD AL Sbjct: 35 AMRYSVLGGGKRMRPLLVYASGHLFGTQPESLDAAAMSVELIHAYSLVHDDLPAMDDDAL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--TLAEGE-LRQ 147 RRGK + + T++L GD L ++AF ++ + L A VAC TLA Sbjct: 95 RRGKPTTHVAFDEATAILAGDALQTRAFGLLADAP----LPATLRVACLQTLAHASGASG 150 Query: 148 LSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + + LD+ + + KT L AA+ + +L L S+ Sbjct: 151 MCGGQALDIDATGQQQTLAALTRMHALKTGALIRAAVRMGALCGQAHEPQLAQLDSFADA 210 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 LG+AFQ+ DD+LD ++GK G+D K T P +L Sbjct: 211 LGLAFQVRDDILDVEASSEQLGKTAGKDQAQDKSTFPALLGM 252 >gi|256783790|ref|ZP_05522221.1| polyprenyl synthatase [Streptomyces lividans TK24] Length = 342 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 3/202 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L + +A + + V A A+E +H +LLHDD++D RR + V Sbjct: 51 GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 110 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ + +L +G+ + +S V+ Sbjct: 111 HGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKASRSLIDGQAQDISYEHRDRVS 170 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G L+ YG +LG+AFQ VDD+L G+ Sbjct: 171 VEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLLGIWGD 230 Query: 218 VNEMGKNIGEDFRNGKPTLPVI 239 + GK D R K +LPV+ Sbjct: 231 PDATGKQTWSDLRQRKKSLPVV 252 >gi|322489859|emb|CBZ25120.1| putative farnesyl synthetase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 359 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 35/317 (11%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-----------LMLEYRGD----------NHVL 66 E++ KY++ +GGK +RP L + A L+ E G + Sbjct: 52 EVLDHAGKYVLAAGGKLMRPALVVLMAHAMLPLDVSARLLEEPIGPLDEVTPGTILPFLR 111 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+L+HDDV+D + RRG+ A V+ + +VL GD++L++A + + Sbjct: 112 LAEVTELIHTASLVHDDVIDKTDTRRGRPALHKVYDTKRAVLAGDYILARASFYIATLQV 171 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + ++ L GEL Q+ ++ E+ KTA L + +L ++++A Sbjct: 172 PRIVILMTTALEELTSGELIQMDGCFDIPRYEQKSF----CKTASLIANSLASTAVLADP 227 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 N ++ Q +G +LGIAFQ++DD LD G+ +GK D + G T+PV+L QR Sbjct: 228 GNEALEQTAFDFGKHLGIAFQILDDCLDITGDEKMLGKPKLVDMKEGIATIPVLLVAQRN 287 Query: 246 TKREKNFWK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 ++ + + D K +E ++K A+ + +RA + + +SL L Sbjct: 288 ATVKEMVCRRFAEPGDAKFCLEAVEK-------EGAVAEAMHRADEHCRLGLESLHKLHP 340 Query: 304 SSWKKSLMEVVDFCLQR 320 S + +L + + R Sbjct: 341 SPARDALESALSMVMNR 357 >gi|289767672|ref|ZP_06527050.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|289697871|gb|EFD65300.1| polyprenyl synthetase [Streptomyces lividans TK24] Length = 354 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 3/202 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L + +A + + V A A+E +H +LLHDD++D RR + V Sbjct: 63 GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 122 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ + +L +G+ + +S V+ Sbjct: 123 HGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKASRSLIDGQAQDISYEHRDRVS 182 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G L+ YG +LG+AFQ VDD+L G+ Sbjct: 183 VEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLLGIWGD 242 Query: 218 VNEMGKNIGEDFRNGKPTLPVI 239 + GK D R K +LPV+ Sbjct: 243 PDATGKQTWSDLRQRKKSLPVV 264 >gi|242242790|ref|ZP_04797235.1| geranyltranstransferase [Staphylococcus epidermidis W23144] gi|242233926|gb|EES36238.1| geranyltranstransferase [Staphylococcus epidermidis W23144] gi|319400858|gb|EFV89077.1| geranyltranstransferase [Staphylococcus epidermidis FRI909] Length = 288 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 125/222 (56%), Gaps = 11/222 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + +KY + +GGKR+RP++ L T ML + A A+E IHT +L+HDD+ +D+ Sbjct: 25 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 84 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVACTLAEGELR 146 RRG++ V+G ++L GD LL++AF +V +T +++++ + + A G L Sbjct: 85 DDYRRGELTNHKVYGEWKAILAGDALLTKAFELVSNDTTIEDSVKVNIIQRLSKASGHLG 144 Query: 147 QLSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + LD+ E + L I K+KT L + ++ + IA V+ ++ + L + Sbjct: 145 MVG-GQALDMESEGKSIRLETLESIHKTKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 203 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +LG+ FQ+ DD+LD G+ +++GK +G D N K T +L Sbjct: 204 HLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLG 245 >gi|302148849|pdb|3NF2|A Chain A, Crystal Structure Of Polyprenyl Synthetase From Streptomyces Coelicolor A3(2) Length = 352 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 3/202 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L + +A + + V A A+E +H +LLHDD++D RR + V Sbjct: 53 GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 112 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ + +L +G+ + +S V+ Sbjct: 113 HGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKASRSLIDGQAQDISYEHRDRVS 172 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G L+ YG +LG+AFQ VDD+L G+ Sbjct: 173 VEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLLGIWGD 232 Query: 218 VNEMGKNIGEDFRNGKPTLPVI 239 + GK D R K +LPV+ Sbjct: 233 PDATGKQTWSDLRQRKKSLPVV 254 >gi|269965070|ref|ZP_06179235.1| geranyltranstransferase [Vibrio alginolyticus 40B] gi|269830373|gb|EEZ84598.1| geranyltranstransferase [Vibrio alginolyticus 40B] Length = 294 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 118/238 (49%), Gaps = 12/238 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +KY + GGKR+RP L T ML + ++ A AIE IH +L+HDD+ +DD L Sbjct: 33 AMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDEL 92 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL------SLVACTLAEGE 144 RRG+ + + T++L GD L + AF ++ + + A EA +L + A G Sbjct: 93 RRGQPTCHIKFDEATAILTGDALQTLAFTIIADGQLSPAAEAQRINMIKALAHSSGASGM 152 Query: 145 LRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMN 200 +L ++N V+ E+ + + KT L A+++ +L AG + V L+ Y Sbjct: 153 CVGQALDLGAENRQVSLEEMEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKA 212 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L + ++ + + Sbjct: 213 IGLAFQVQDDILDIISDTETLGKPQGSDQGLNKSTYPSLLGLEGAIEKAHTLLQEALQ 270 >gi|302380702|ref|ZP_07269167.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3] gi|302311645|gb|EFK93661.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3] Length = 269 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 113/204 (55%), Gaps = 5/204 (2%) Query: 20 LKRICSDVEMIPDVVKY-LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 LK + + I + +KY L+ G KRLRP+L L T M + A +IE IH + Sbjct: 14 LKDLSFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNESISEPMNYALSIELIHNYS 73 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALS 134 L+HDD+ +D+ RRGK+ +G +VLVGD LL+ +F ++ E+ E A+ A Sbjct: 74 LVHDDLECMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYSFEVLSESIKNEVDAMCANY 133 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 +V + G +R L + ++E++ + + KT L A+ + +++ V ++ L Sbjct: 134 IVKKSGCFGMIRGQLLDIDSKISEDNIIEIYDKKTCNLLKASTVSAGILSKVDHTTLLKL 193 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEV 218 ++Y NLG+AFQ++DD++DY ++ Sbjct: 194 ENYAFNLGMAFQIIDDIMDYENDI 217 >gi|49474704|ref|YP_032746.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella quintana str. Toulouse] gi|49240208|emb|CAF26676.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella quintana str. Toulouse] Length = 301 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 11/235 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S E + ++Y + +GGKRLRP L + + + + + + +A A+E +H +L+HDD+ Sbjct: 33 SRPEALIKAMRYGVLNGGKRLRPFLVIQSGALFDIPAEYCLDVASALECVHCYSLIHDDL 92 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 +D+ LRRG+ + + T++L G+ LL+ AF ++ S E + TLA+ Sbjct: 93 PAMDNDTLRRGQPTVHIAFDEATAILAGNALLTFAFEIIAHKASTLPFETKIKLITTLAQ 152 Query: 143 ---------GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 G++ L K + L + KTA L S A + ++I + + Sbjct: 153 SAGLGGMIGGQMLDLEAEKKPQDSAISILTLQHMKTAALISFACQAGAIIGNASKELTEK 212 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 L ++G LG+AFQL DD+LD +GK G+D K T + Q K+ Sbjct: 213 LAAFGTYLGLAFQLTDDLLDITASTEILGKTAGKDETAQKATFVRLYGIQETQKK 267 >gi|89901647|ref|YP_524118.1| polyprenyl synthetase [Rhodoferax ferrireducens T118] gi|89346384|gb|ABD70587.1| farnesyl-diphosphate synthase [Rhodoferax ferrireducens T118] Length = 314 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 17/229 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATA-------LMLEYRGDNHVLLACAIEFIHTATLLHDDV- 84 ++Y + GGKRLRP+L LA + + + ACA+E IH +L+HDD+ Sbjct: 47 AMRYAVLDGGKRLRPLLVLAASEAASGERPAAANTPEIALRAACAVELIHAYSLVHDDLP 106 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEAL-EALSLV 136 +D+ LRRGK + +G +++L GD L + AF ++ I + Q AL L+ Sbjct: 107 CMDNDVLRRGKATVHVKFGEASAMLAGDALQAMAFELLTPDDDAIPARQQAALCRLLARA 166 Query: 137 ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A + + + L S + +TE + + KT L A++ + + V AL Sbjct: 167 AGSAGMAGGQAIDLASVGVALTERQLRQMHRLKTGALLQASVMMGAACGDVSAQAEAALM 226 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 SYG +G+AFQ+VDD+LD + +GK G+D KPT +L +R Sbjct: 227 SYGAAIGLAFQVVDDMLDVTADSATLGKTAGKDADQDKPTFVSLLGLER 275 >gi|300024283|ref|YP_003756894.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299526104|gb|ADJ24573.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 301 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 72/228 (31%), Positives = 116/228 (50%), Gaps = 14/228 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + D +++ + +GGKR RP L +A + D + A A+E IH +L+HDD+ +D+ Sbjct: 35 LADALRHAVLAGGKRFRPFLVFESAGLFGVARDAALPAAAALECIHCYSLVHDDLPAMDN 94 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA------ 141 LRRG+ + T++LVGD L + AF + + + + EA + + LA Sbjct: 95 DELRRGQPTVWKAYDEWTAILVGDALQAIAFELTSDPRRHDDAEARAELTHALAIASGAI 154 Query: 142 ---EGELRQLSLSKNLD---VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G++ L + D T D + + KT L + E+ +++ S R ALK Sbjct: 155 GMVGGQMLDLEAGRLPDQPAATIADIVRLQAMKTGRLITVGCEMGAILGRASPSDRAALK 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +YG +LG AFQ+ DD+LD G ++GK G+D GK TL +L Q Sbjct: 215 TYGEHLGTAFQISDDLLDAEGSAADVGKATGKDAAAGKATLIGLLGIQ 262 >gi|91225061|ref|ZP_01260283.1| geranyltranstransferase [Vibrio alginolyticus 12G01] gi|91190004|gb|EAS76275.1| geranyltranstransferase [Vibrio alginolyticus 12G01] Length = 294 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 118/238 (49%), Gaps = 12/238 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +KY + GGKR+RP L T ML + ++ A AIE IH +L+HDD+ +DD L Sbjct: 33 AMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDEL 92 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL------SLVACTLAEGE 144 RRG+ + + T++L GD L + AF ++ + + A EA +L + A G Sbjct: 93 RRGQPTCHIKFDEATAILTGDALQTLAFTIIADGQLSPAAEAQRINMIKALAHSSGASGM 152 Query: 145 LRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMN 200 +L ++N V+ E+ + + KT L A+++ +L AG + V L+ Y Sbjct: 153 CIGQALDLGAENRQVSLEEMEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKA 212 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L + ++ + + Sbjct: 213 IGLAFQVQDDILDIISDTETLGKPQGSDQGLNKSTYPSLLGLEGAIEKAHTLLQEALQ 270 >gi|329118147|ref|ZP_08246859.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200] gi|327465807|gb|EGF12080.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200] Length = 297 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 14/215 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKRLRP+L LA + + + D A+E IH +L+HDD+ +D+ +L Sbjct: 38 AMRYAVLGGGKRLRPLLVLAASELGQADPDATAHAMAAVELIHAYSLVHDDMPAMDNDSL 97 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------TLAE 142 RRGK + +G ++L GD L + AF ++ + A L + A +A Sbjct: 98 RRGKPTCHIAYGEAAALLAGDALQTLAFDIITRPAALPAERRLQMAATLARASGSLGMAG 157 Query: 143 GELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI-AGVQNSVRQALKSYGMN 200 G+ L+ + K L +E +++H +K T L AA+ + L + ++ +L SY Sbjct: 158 GQAIDLANVGKTLTQSELEHMHRLK--TGALIRAAVRLGGLACPDLDDTALHSLDSYAAA 215 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 LG+AFQ++DDVLD + +GK G+D +N KPT Sbjct: 216 LGLAFQVIDDVLDCAADTATLGKTAGKDAQNNKPT 250 >gi|304312212|ref|YP_003811810.1| Polyprenyl synthetase [gamma proteobacterium HdN1] gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1] Length = 297 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 77/230 (33%), Positives = 121/230 (52%), Gaps = 21/230 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDV-- 84 + + + Y + +GGKRLRP+L A A E G + L ACA+E +H+ +L+HDD+ Sbjct: 34 LSEAMHYAVMNGGKRLRPVLAFAAA---EACGTDASLANDAACALEMLHSYSLVHDDLPA 90 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--------SQEALEALSLV 136 +D+ ALRRG + + T++L GD L AF ++ ++ E + +L++ Sbjct: 91 MDNDALRRGVPTCHIAFDEATAILAGDALQCLAFEVLASSELPSMTTPIKLEMIRSLAVA 150 Query: 137 ACT--LAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + T +A G+ L+ S K LD+ + +H + KT L AA+ + +L A S A Sbjct: 151 SGTHGMAGGQALDLAASGKLLDLHGLETIH--RLKTGCLIRAAVRLGALAAHAPESSLLA 208 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 L Y LG+A+Q+ DD+LD G+ +GK G D K T P IL Q Sbjct: 209 LDQYASALGLAYQVQDDILDVTGDTLTLGKQQGADAVLDKATYPRILGLQ 258 >gi|293571745|ref|ZP_06682764.1| geranyltranstransferase [Enterococcus faecium E980] gi|291608202|gb|EFF37505.1| geranyltranstransferase [Enterococcus faecium E980] Length = 296 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 114/224 (50%), Gaps = 13/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDS 88 D + Y + +GGKR+RP+L LA + D V +A A+E +HT +L+HDD+ +D+ Sbjct: 33 DAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMDND 92 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLVACTLAEGEL 145 LRRGK V+G ++L GD LL+ AF M S + L L C A+G + Sbjct: 93 DLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLLLQQLAVCAGAQGMV 152 Query: 146 RQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + SK L + E ++H + KT L AL ++A + L+ + Sbjct: 153 AGQAADIEGESKKLSLEELAFIH--ERKTGRLIRYALLAGGILAKQPEEILLLLQRLAEH 210 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+AFQ+ DD+LD G +GK G+D R K T P +L ++ Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEK 254 >gi|329123445|ref|ZP_08252009.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116] gi|327471027|gb|EGF16482.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116] Length = 296 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 77/240 (32%), Positives = 131/240 (54%), Gaps = 13/240 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 35 EAMEYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-L 148 LRRG + + T++L GD L S AF ++ +T + + + L+L+ LA+G Q + Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISSEQKLALIKI-LAQGAGAQGM 153 Query: 149 SLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAG--VQNSVRQALKSYGM 199 L ++LD+ E + L +I ++KT L AAL++ + + ++ Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLNELELIHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S +++ Sbjct: 214 AIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSE 273 >gi|317492932|ref|ZP_07951356.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919054|gb|EFV40389.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 301 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 80/270 (29%), Positives = 127/270 (47%), Gaps = 29/270 (10%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y GGKRLRP L AT M DN A A+E IH +L+HDD+ +DD L Sbjct: 36 AMRYGALLGGKRLRPYLVYATGEMFGLSLDNLDAPAAAVECIHAYSLMHDDLPAMDDDNL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----------LEALSLVACT 139 RRG+ + + +G ++L GD L + AF ++ ++ + L S VA Sbjct: 96 RRGQPTSHIKFGEAHAILAGDALQTLAFSILADSPMPDVAVSDRLAMLSELAQASGVAGM 155 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK---S 196 L + K +D+ + +H KT L A+ + +L AG ++ R AL Sbjct: 156 CGGQALDLEAEGKYVDLQSLERIH--NHKTGALIRCAIRMGALAAG--DTGRAALPLLDR 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y +G+AFQ+ DD+LD G+ + GK G D K T P +L ++ + + ++ Sbjct: 212 YAAAIGLAFQVQDDILDVIGDSEKTGKPQGSDQELEKSTYPALLGLKQAQNKALDLYQDA 271 Query: 257 IN-----DGKISVENLK----KAFIIMREN 277 I + S++ L +FII R+N Sbjct: 272 IQVLEELEQHHSIDTLALKSLASFIIERDN 301 >gi|282876057|ref|ZP_06284924.1| geranyltranstransferase [Staphylococcus epidermidis SK135] gi|281295082|gb|EFA87609.1| geranyltranstransferase [Staphylococcus epidermidis SK135] Length = 298 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 126/234 (53%), Gaps = 13/234 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + +KY + +GGKR+RP++ L T ML + A A+E IHT +L+HDD+ +D+ Sbjct: 35 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 94 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGE-- 144 RRGK+ V+G ++L GD LL++AF +V + E +S++ + A G Sbjct: 95 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTTIEDSVKVSIIKRLSKASGHWG 154 Query: 145 ------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L S K++ + + +H ++KT L + ++ + IA V+ ++ + L + Sbjct: 155 MVGGQALDMESEGKSIRLETLESIH--ETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFS 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +LG+ FQ+ DD+LD G+ +++GK +G D N K T +L + ++ N Sbjct: 213 HHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLGKEGAEEKLNNH 266 >gi|324995302|gb|EGC27214.1| geranyltranstransferase [Streptococcus sanguinis SK678] gi|332366064|gb|EGJ43820.1| geranyltranstransferase [Streptococcus sanguinis SK1059] Length = 291 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 130/262 (49%), Gaps = 34/262 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEF 73 +F +++ SD + +V+ Y + +GGKR+RP+L L A LE + H +A A+E Sbjct: 16 DFYRSQQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLEL-AEAHYQVASALEM 71 Query: 74 IHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQ-- 127 IHT +L+HDD+ RRG++ + +G ++L GD L + ++ E SQ Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVK 131 Query: 128 -EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + LSL A + +GE + +SL ED + +KT L + Sbjct: 132 VDLISELSLAAGSFGMVAGQVLDMQGEGQAISL--------EDLKTIHANKTGKLLTYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LIAGV+ SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T P Sbjct: 184 VAAGLIAGVEQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTIND 259 L G KNF+ T+++ Sbjct: 244 AFL----GLDGAKNFFNQTLDE 261 >gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4] gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196] gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621] gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4] gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621] gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196] Length = 297 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 29/262 (11%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 30 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------------- 128 + LRRGK V+G +VL GD LL+ AF +++ + +E Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147 Query: 129 --ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A +VA +A+ E K L + E +Y+H KT L A+ ++++ Sbjct: 148 AKAAGPEGMVAGQVADMEAE----GKRLTINELEYIH--NHKTGKLLEFAVLAGAILSDA 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R Sbjct: 202 TEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRA- 260 Query: 247 KREKNFWKSTINDGKISVENLK 268 K+ + I K S+ +L+ Sbjct: 261 ---KSILEEKIAKAKDSISSLQ 279 >gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603] gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603] Length = 297 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 29/262 (11%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C +V + + + Y + +GGKRLRP+L AT + V ACA+E IHT +L+HDD Sbjct: 30 CPNV--LREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------------- 128 + LRRGK V+G +VL GD LL+ AF +++ + +E Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147 Query: 129 --ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A +VA +A+ E K L + E +Y+H KT L A+ ++++ Sbjct: 148 AKAAGPEGMVAGQVADMEAE----GKRLTINELEYIH--NHKTGKLLEFAVLAGAILSDA 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + L ++ +G+AFQ+ DD+LD G E+GK IG D N K T + R Sbjct: 202 TEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRA- 260 Query: 247 KREKNFWKSTINDGKISVENLK 268 K+ + I K S+ +L+ Sbjct: 261 ---KSILEEKIAKAKDSISSLQ 279 >gi|282866077|ref|ZP_06275125.1| Polyprenyl synthetase [Streptomyces sp. ACTE] gi|282559116|gb|EFB64670.1| Polyprenyl synthetase [Streptomyces sp. ACTE] Length = 367 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 3/208 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + + A A+E +H +LLHDD++D RR + V Sbjct: 76 GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 135 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S VT Sbjct: 136 HGPAQAILVGDALFALANEVLLELGTVEAGRAARRLTSATRKLIDGQAQDISYEHRERVT 195 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A+ + +++ G + L++YG +LG+AFQ VDD+L G+ Sbjct: 196 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADVLEAYGYHLGLAFQAVDDLLGIWGD 255 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 256 PESTGKQTWSDLRQRKKSLPVVAALAAG 283 >gi|313885281|ref|ZP_07819032.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8] gi|312619387|gb|EFR30825.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8] Length = 321 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 97/324 (29%), Positives = 154/324 (47%), Gaps = 33/324 (10%) Query: 11 DMEKVNFLILKRI-CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LA 68 D+E+V +++ I S+ E+ ++ Y I + GK R L L A + + L +A Sbjct: 15 DLERVKKMMIAEISVSNPEIKAKIMDY-INASGKFARAGLVLMFARLNQKTISQEKLNIA 73 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IE H ATL+HDDV+D++ RRG A L N+ ++ GD+LL+ A + Q Sbjct: 74 AGIELFHLATLIHDDVIDEADQRRGIQAFHLAESNRIAIYAGDYLLAYAMRFLY----QS 129 Query: 129 ALEALSLVACTLAE----GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 L S + E GEL QL + +T YL IK KTA+LF A + Sbjct: 130 GLNDFSGIEQKTIELILNGELNQLKNVADPTMTIYRYLRQIKGKTALLFGLA-----TVG 184 Query: 185 GVQN---SVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 G Q S RQ ++Y G +G+AFQL+DD LD+ + + GK +D NG T P+I Sbjct: 185 GYQTESISRRQLKQAYYAGEEIGMAFQLIDDQLDFFQKQEQTGKPQLQDVMNGIYTAPLI 244 Query: 240 LAFQRGTKREKNFWKSTINDGKISVEN---LKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A + K + + +S+EN L++ ++ E+ A V E Y KA Sbjct: 245 RAI---------YQKPILKNLILSIENEEDLQQIQDLIEESDADVYVENLVKKYLNKAIK 295 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 ++ L + + ++ ++ + R Sbjct: 296 RIQKLDQNDYSSEILSLIQTLMTR 319 >gi|261391792|emb|CAX49247.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP synthase) [Neisseria meningitidis 8013] gi|325139150|gb|EGC61696.1| geranyltranstransferase [Neisseria meningitidis ES14902] Length = 298 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 14/232 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + E + AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + + T++LVGD L +QAF ++ A Sbjct: 80 IHVYSLVHDDMPAMDNDSLRRGKPTCHIQYDEATALLVGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSC 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|300690860|ref|YP_003751855.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum PSI07] gi|299077920|emb|CBJ50559.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum PSI07] Length = 299 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 21/227 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GKR+RP+L A + E D ++CA+E IH +L+HDD+ L Sbjct: 36 AMRYASLGAGKRVRPLLVHAAGALGEASPDALDGVSCAVEMIHAYSLVHDDMPCMDDDDL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS- 149 RRG+ + T++L GD L +QAF M+ E L A+S + GEL + S Sbjct: 96 RRGRPTVHRAYDEATALLAGDALQTQAFIMLAE------LGAVSPATRAVLVGELARASG 149 Query: 150 ------------LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 S + +++E + + KT L A+L + +L AGV + + + +Y Sbjct: 150 SLGMAGGQAIDLQSVGVALSQEALETMHRMKTGALLRASLRMGALCAGVNAAALEQVDAY 209 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ+VDD+LD + +GK G+D N KPT IL +R Sbjct: 210 AGAVGLAFQVVDDILDVTADTATLGKTAGKDEANDKPTYVSILGLER 256 >gi|311110938|ref|ZP_07712335.1| farnesyltranstransferase [Lactobacillus gasseri MV-22] gi|311066092|gb|EFQ46432.1| farnesyltranstransferase [Lactobacillus gasseri MV-22] Length = 288 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 12/256 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60 L+D K +++ + + S+V+ + ++ Y + +GGKRLRP+L LAT L Y+ Sbjct: 3 LKDFQKKYTPQIDKFLEDHLASEVDNPIFSKIMSYSVMAGGKRLRPLLFLATLETLNYKI 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 ++ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL Sbjct: 63 SESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGI 122 Query: 119 CMVIETKSQEALEAL-SLVACTLAEGELRQLSL-SKNLDVTEEDYLHVIKS----KTAVL 172 + E + AL + S G + L + S N D+ +E+ VI KT L Sbjct: 123 QWITEGSNSAALAIIISQAVGPNGMGGGQYLDIDSTNNDLVKEN-AKVIDQMEWLKTGCL 181 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 A+++++++ AG L ++ G ++Q+ DD++D E GK +D G Sbjct: 182 IEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVETEQEAGKATHKDADEG 241 Query: 233 KPTLPVILAFQRGTKR 248 K +L + K+ Sbjct: 242 KNNTLTLLGIEASRKQ 257 >gi|260752677|ref|YP_003225570.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552040|gb|ACV74986.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 298 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 12/238 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP+L AT + + + + AIE IH +L+HDD+ +D+ Sbjct: 36 EAMRYAAIGGGKRLRPLLVAATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTLAE 142 LRRGK + + ++VL GD L + AF ++ E K E ++AL++ + Sbjct: 96 LRRGKPTVHKAFDDASAVLSGDALQALAFEILSEEKIHTDPHVRLELIQALAIASGKDGM 155 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKS---KTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + L+ D + + KT LF LE +++ +R LK+Y Sbjct: 156 VGGQAIDLAAETSTVPFDLPTITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYAR 215 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD++D G+ GK +G+D GK T +L ++ + + I Sbjct: 216 DIGLAFQIADDLIDAEGDEAVAGKAVGKDAAAGKATFLSLLGLEKARSQAQALVDQAI 273 >gi|27468120|ref|NP_764757.1| geranyltranstransferase [Staphylococcus epidermidis ATCC 12228] gi|251810934|ref|ZP_04825407.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060] gi|27315666|gb|AAO04801.1|AE016748_35 geranyltranstransferase [Staphylococcus epidermidis ATCC 12228] gi|251805614|gb|EES58271.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060] Length = 293 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 126/234 (53%), Gaps = 13/234 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + +KY + +GGKR+RP++ L T ML + A A+E IHT +L+HDD+ +D+ Sbjct: 30 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 89 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGE-- 144 RRGK+ V+G ++L GD LL++AF +V + E +S++ + A G Sbjct: 90 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTTIEDSVKVSIIKRLSKASGHWG 149 Query: 145 ------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L S K++ + + +H ++KT L + ++ + IA V+ ++ + L + Sbjct: 150 MVGGQALDMESEGKSIRLETLESIH--ETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFS 207 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +LG+ FQ+ DD+LD G+ +++GK +G D N K T +L + ++ N Sbjct: 208 HHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLGKEGAEEKLNNH 261 >gi|329737240|gb|EGG73494.1| geranyltranstransferase [Staphylococcus epidermidis VCU028] Length = 288 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 126/234 (53%), Gaps = 13/234 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + +KY + +GGKR+RP++ L T ML + A A+E IHT +L+HDD+ +D+ Sbjct: 25 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 84 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGE-- 144 RRGK+ V+G ++L GD LL++AF +V + E +S++ + A G Sbjct: 85 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTTIEDSVKVSIIKRLSKASGHWG 144 Query: 145 ------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L S K++ + + +H ++KT L + ++ + IA V+ ++ + L + Sbjct: 145 MVGGQALDMESEGKSIRLETLESIH--ETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFS 202 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +LG+ FQ+ DD+LD G+ +++GK +G D N K T +L + ++ N Sbjct: 203 HHLGMMFQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLGKEGAEEKLNNH 256 >gi|327541916|gb|EGF28424.1| Polyprenyl synthetase [Rhodopirellula baltica WH47] Length = 315 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 88/288 (30%), Positives = 133/288 (46%), Gaps = 33/288 (11%) Query: 18 LILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 + L+ C D +P+ V+Y + + GKRLRPMLT+ A ++ + A A+E Sbjct: 31 VALEAACEDRPGVPERLAAAVRYAVLAPGKRLRPMLTIMAAEACGGDAESAMPSAVAVEM 90 Query: 74 IHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-----TKS 126 IH +L+HDD+ LRRG+ + + T++L GD L S AF + TKS Sbjct: 91 IHAYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAGDALQSMAFAHLHHSTSDATKS 150 Query: 127 QEALEALSLVA--CTLAEGELRQLSLSKNLDVTEEDY---------LHVIKS-KTAVLFS 174 + L+ A L G+ L K T ED+ L I KT LF+ Sbjct: 151 AALIGTLATAAGPAGLVGGQADDLDAEK---YTVEDFGGADAALKHLEAIHHRKTGALFT 207 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A + ++ AG + AL Y G+AFQ+ DD+LD ++GK G+D GK Sbjct: 208 ACAAMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDCTSTDEQLGKRTGKDDGRGKL 267 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282 T P ++ G R + +STI+ ++ E+L+ R R L D Sbjct: 268 TYPGLM----GLDRARAHAESTIH---MAHESLQLFGTAGRRLRKLAD 308 >gi|21225056|ref|NP_630835.1| polyprenyl synthatase [Streptomyces coelicolor A3(2)] gi|4539167|emb|CAB39696.1| putative polyprenyl synthatase [Streptomyces coelicolor A3(2)] Length = 378 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 3/202 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L + +A + + V A A+E +H +LLHDD++D RR + V Sbjct: 87 GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 146 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ + +L +G+ + +S V+ Sbjct: 147 HGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKASRSLIDGQAQDISYEHRDRVS 206 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G L+ YG +LG+AFQ VDD+L G+ Sbjct: 207 VEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLLGIWGD 266 Query: 218 VNEMGKNIGEDFRNGKPTLPVI 239 + GK D R K +LPV+ Sbjct: 267 PDATGKQTWSDLRQRKKSLPVV 288 >gi|313897461|ref|ZP_07831004.1| geranyltranstransferase [Clostridium sp. HGF2] gi|312957831|gb|EFR39456.1| geranyltranstransferase [Clostridium sp. HGF2] Length = 280 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/237 (28%), Positives = 117/237 (49%), Gaps = 10/237 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + ++Y + +GGKR+RP L LA + +A AIE IHT +L+HDD+ +D+ Sbjct: 20 VREAMQYSLMAGGKRIRPRLLLAVLRAYGFEETIGYPVAAAIEMIHTYSLIHDDLPAMDN 79 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV-----ACTL 140 LRRG + +G ++L GD LL+QAF +++ +E L L+ A + Sbjct: 80 DTLRRGMPTCHVKFGEDVAILAGDALLTQAFYTAAACTCRAEVLVEILKLLSEFSGANGM 139 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+++ L N + + KT L S L ++L+AG + + G + Sbjct: 140 ILGQIKDLEGEANPGIDHAGLQVIHYYKTGRLLSLPLVCAALLAGHREDA-AVWERIGAD 198 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G++FQ+ DD+LD V E+GKNI D N K T ++ + + +++ + Sbjct: 199 TGLSFQIQDDILDVTSTVEELGKNINSDAENEKTTYVTLMGVEAAREEADRYYRRAL 255 >gi|295106544|emb|CBL04087.1| farnesyl-diphosphate synthase /geranylgeranyl-diphosphate synthase [Gordonibacter pamelaeae 7-10-1-b] Length = 349 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 76/237 (32%), Positives = 118/237 (49%), Gaps = 18/237 (7%) Query: 31 PDVVKYLI-------FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 PD+ +YL +GGKR RP++ A + A AIE HTA L+HDD Sbjct: 43 PDMDRYLYEPLNAYSQNGGKRHRPLICFAACRAVGGDMARATSAAAAIEHFHTAALIHDD 102 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-------TKSQEALEALSLV 136 + D++ LRRG+ L G ++ +GD LS VI TK + E + + Sbjct: 103 IADEAELRRGEPCLHLTEGMGLAINMGDLALSLVNGTVINDPLLDDATKVRVVNELIEMT 162 Query: 137 ACTLAEGELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFSA-ALEVSSLIAGVQNSVRQA 193 T+ EG+ + +++ D+T EDYL + KTA A L + ++I G + +A Sbjct: 163 RRTI-EGQALDIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAIIGGGTEAEIEA 221 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L++YG++ G+AFQ+ DD+L+ G K+ D GK TL V+ A Q R++ Sbjct: 222 LRNYGLDTGLAFQIQDDLLNLIGSEESTKKDFRNDITEGKRTLMVVHALQHSDDRDR 278 >gi|149191099|ref|ZP_01869358.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1] gi|148835027|gb|EDL52005.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1] Length = 294 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 12/238 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR RP L AT + + A AIE IH +L+HDD+ +DD Sbjct: 32 EAMRYALLLGGKRARPFLVYATGQIFGCTNEQLDTPAAAIECIHAYSLIHDDLPAMDDDE 91 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQEALEALSLVACTLAEG 143 LRRG+ + + T++L GD L + AF ++ E Q L + A G Sbjct: 92 LRRGQATCHIQFDEATAILTGDALQTLAFTILSEGELASFANEQRITMVQKLAHASGAAG 151 Query: 144 ELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 +L ++N +VT E+ + + KT L A+++ +L AG + L++Y Sbjct: 152 MCIGQALDLEAENRNVTLEELERIHRHKTGALIKCAVQLGALAAGDKGVQYLPQLENYAD 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ +GK G D K T P +L + ++ ++ + Sbjct: 212 AIGLAFQVQDDILDIVGDTETLGKPQGSDVELNKSTYPALLGLEGAQQKAAQLFEEAL 269 >gi|289642098|ref|ZP_06474250.1| Polyprenyl synthetase [Frankia symbiont of Datisca glomerata] gi|289508061|gb|EFD29008.1| Polyprenyl synthetase [Frankia symbiont of Datisca glomerata] Length = 338 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 111/227 (48%), Gaps = 8/227 (3%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 R +D E P L GGK +RP L L +A + + A A+E +H +LLH Sbjct: 39 RGWTDAEGTP-----LPGGGGKLVRPALALLSAEAAGAAVEVGLPGAVAVELVHDFSLLH 93 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-- 139 DD++D RR + A V+G ++L GD LL A +++E + + A ++ Sbjct: 94 DDLMDGDTERRHRPTAWTVFGADGAILAGDALLGLATQVLLEVEGEPGRRAAIMLGAGVQ 153 Query: 140 -LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G+ L DVT D L + KT L S + + +++AG + + L +G Sbjct: 154 DLVRGQAEDLYFETRNDVTVADTLTMEDGKTGALLSCSAAIGAVLAGGRTELVDGLAEFG 213 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 LG AFQLVDD+L G+ GK + D R+ K ++PV++A G Sbjct: 214 SRLGTAFQLVDDLLGIWGDPAVTGKPVLSDLRSRKKSVPVVVALDAG 260 >gi|326387412|ref|ZP_08209021.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM 19370] gi|326208068|gb|EGD58876.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM 19370] Length = 305 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 10/237 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP+L A A + V + A+E IH +L+HDD+ +D+ + Sbjct: 45 EAMRYSAIGGGKRLRPLLVTAVASLFGVDRSVAVRVGTALESIHVYSLIHDDMPCMDNDS 104 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGELRQL 148 LR GK L + + T+VL GD L + AF ++ + + + LV + + Sbjct: 105 LRHGKPTVHLAYDDATAVLAGDALQALAFEILSDPDLVGDPFVRIELVRTLAHASGINGM 164 Query: 149 SLSKNLDVTEE----DYLHVIKS---KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + +D+ E D V + KT L +AA+E+ +++ V R L+ Y N+ Sbjct: 165 VGGQMMDIAAETASFDLATVTRLQQLKTGALLAAAVEMGAILGHVPPEGRTHLRGYARNI 224 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 G+AFQ+VDD+LD G+ GK + +D GK T +L R + + I Sbjct: 225 GLAFQIVDDLLDAEGDEEAAGKALRKDAEAGKETFVSLLGIDRARSQARVLVDQAIE 281 >gi|153853044|ref|ZP_01994453.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814] gi|149753830|gb|EDM63761.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814] Length = 300 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 12/242 (4%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 +I + ++Y + +GGKRLRPML T+ + + A+E IHT +L+HDD+ +D Sbjct: 35 VIMEAMEYSLMAGGKRLRPMLMRETSRLFGDETEALCPFMAALEMIHTYSLVHDDLPAMD 94 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLVACTLAEG 143 + RRG+ +V+G +L GD LL+ AF ET QE+L+ ++ + Sbjct: 95 NDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETAFRAFETAPQESLKIGRALSVLGRKA 154 Query: 144 ELRQLSLSKNLDVTE------EDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + + + +DV E +D L I KT L A+ + +++ G + + ++ Sbjct: 155 GVYGMIGGQVIDVKETGHAVPKDVLDTIYELKTGALIECAMMIGAILGGAEEEDVRKVEK 214 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 +GIAFQ+ DD+LD +GK I D +N K T +L ++ KR + Sbjct: 215 IAHYVGIAFQIQDDILDVTSTEEVLGKPIHSDEKNQKTTYVTLLGIEQAQKRVEELSNQA 274 Query: 257 IN 258 I+ Sbjct: 275 ID 276 >gi|6466227|gb|AAF12843.1|AF203881_16 geranyltransferase [Zymomonas mobilis subsp. mobilis ZM4] Length = 298 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 12/238 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP+L +AT + + + + AIE IH +L+HDD+ +D+ Sbjct: 36 EAMRYAAIGGGKRLRPLLVVATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEAL-SLVACTLAEGE 144 LRRGK + + ++VL GD L + AF ++ I T LE + +L++ + +G Sbjct: 96 LRRGKPTVHKAFDDASAVLSGDALQALAFEILSEEKIHTDPHVRLELIQALLSPPVKDGM 155 Query: 145 L--RQLSLSKNLDVTEEDYLHVIKS---KTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + + L+ D + + KT LF LE +++ +R LK+Y Sbjct: 156 VGGQAIDLAAETSTVPFDLPTITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYAR 215 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD++D G+ GK +G+D GK T +L ++ + + I Sbjct: 216 DIGLAFQIADDLIDAEGDEAVAGKAVGKDAAAGKATFLSLLGLEKARSQAQALVDQAI 273 >gi|308233677|ref|ZP_07664414.1| Polyprenyl synthetase [Atopobium vaginae DSM 15829] gi|328943611|ref|ZP_08241076.1| putative geranyltranstransferase [Atopobium vaginae DSM 15829] gi|327491580|gb|EGF23354.1| putative geranyltranstransferase [Atopobium vaginae DSM 15829] Length = 366 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 31/314 (9%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRG-------------DNHVLLACAIEFIHTATLL 80 + + +GGK +RP L + A Y G D + ++CA E A L+ Sbjct: 55 LAHFTVNGGKLIRPALCVLGAYACGYEGMLKDNCSIQKSVSDTLLQISCAFEHFQAAALI 114 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEAL------EAL 133 HDD+ D+S LRRGK V G + +GD L A C+ + + L E + Sbjct: 115 HDDIADESLLRRGKPCLYRVHGTGLATNMGDSALVHALECINSLSGISDELRVRLIQEFI 174 Query: 134 SLVACTLAEGELRQLSLSKN--LDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSV 190 ++ T+ EG+ + S D++ +DYL++ SKTA S L + +L AG Sbjct: 175 TMEKHTI-EGQALDVGWSNENRWDISLDDYLYMATSKTAYYSASTPLVIGALFAGASQKR 233 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL++YG+ G+AFQL DD L+ G+ N++GK++ D GK T + A + Sbjct: 234 SEALRAYGLQAGLAFQLKDDELNLFGDANKLGKDLRSDIVEGKRTYLTLYALSHLNALQS 293 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 K + S + L +A ++ + A + A S Q+A C+ ++ + K Sbjct: 294 AQLKEILTKPHNSPDELDEACALIEASGARTHSHNLARSLAQQAD---ACIDENLFSKET 350 Query: 311 MEVVD----FCLQR 320 + ++ F +QR Sbjct: 351 VAILHAMTAFFIQR 364 >gi|260580726|ref|ZP_05848552.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae RdAW] gi|260092543|gb|EEW76480.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae RdAW] Length = 296 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 127/242 (52%), Gaps = 17/242 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 35 EAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------ 143 LRRG + + T++L GD L S AF ++ +T + + L+L+ LA+G Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISTEQKLALIQI-LAQGAGVQGM 153 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSY 197 L +S K + ++E + +H ++KT L AAL++ + + + Q+L Y Sbjct: 154 CLGQSLDLISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKRLEQSLTQY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S + Sbjct: 212 AEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSAL 271 Query: 258 ND 259 ++ Sbjct: 272 SE 273 >gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa] gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa] Length = 287 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 128/232 (55%), Gaps = 18/232 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--V 85 I + ++Y + +GGKR+RP+L +A+ ++ GD + + ACA+E IHT +L+HDD+ + Sbjct: 24 IHEAMRYSLLAGGKRVRPILCIASCELV--GGDEELAMPTACALEMIHTMSLIHDDLPCM 81 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT-- 139 D+ LRRG + V+G T+VL GD LL+ AF V S ++AL+ + Sbjct: 82 DNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFEHVARNTKNVSSDRVVQALAELGSAVG 141 Query: 140 ---LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ + S K + ++ +Y+HV KTA L AA+ +++ G + + L+ Sbjct: 142 SKGLVAGQVVDIESEGKEVSLSTLEYIHV--HKTAKLLEAAVVCGAIMGGADATSVERLR 199 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 Y ++G+ FQ+VDD+LD E+GK G+D + K T P ++ K Sbjct: 200 KYARSIGLLFQVVDDILDMTKSSEELGKTAGKDLTSDKATYPKLIGIDEAKK 251 >gi|315305700|ref|ZP_07875309.1| heptaprenyl diphosphate synthase component 2 [Listeria ivanovii FSL F6-596] gi|313625931|gb|EFR95454.1| heptaprenyl diphosphate synthase component 2 [Listeria ivanovii FSL F6-596] Length = 169 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 90/169 (53%), Gaps = 9/169 (5%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 V +A A+E +H ATL+HDDVVDDS +RRG +G +V GD+L C I + Sbjct: 3 VSIAAALEVLHMATLIHDDVVDDSPMRRGIPTIHSKYGRNYAVYTGDYLF--CICFKILS 60 Query: 125 KSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++E + + + + GEL Q+ S +DVT +YL I KTA LF AL S Sbjct: 61 SHSSSVENIEFNSKNIEKILMGELDQMRTSYKMDVTVREYLSRISGKTAQLF--ALSCYS 118 Query: 182 LIAGVQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 AG + S K Y G LG+AFQ++DDVLDY +GK + D Sbjct: 119 GAAGSKASRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDQGLGKPVLND 167 >gi|108743210|dbj|BAE95384.1| hexaprenyl pyrophosphate synthetase [Saccharomyces bayanus] Length = 359 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 108/246 (43%), Gaps = 52/246 (21%) Query: 38 IFSGGKRLRPMLTLATALMLEY-----RG--DNHVLLACAIEFIHTATLLHDDVVDDSAL 90 I G K L P LT +LE RG LA +E IHTA+LLHDDV+D S Sbjct: 114 ILHGIKPLNP-LTKGPEPLLEKDFDKERGILPKQRRLAEIVEMIHTASLLHDDVIDYSDK 172 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS- 149 RRG+ + N+ +VL GDFLL +A + + E +E +S L EGE QL Sbjct: 173 RRGRPTGNAAFTNKMAVLAGDFLLGRATVSISRLHNPEVVELMSNSIANLVEGEFMQLKN 232 Query: 150 -------------------LSKNLDVTEED------------------------YLHVIK 166 SK L+V E + Y+H Sbjct: 233 TSIDPDTDTIDNGHKLLPVPSKKLEVKEHEFRVPSRQQGLQLSHDQLIETAFEYYIHKTY 292 Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KTA L S + +++++G +V +G NLGI FQLVDD+LD+ ++GK G Sbjct: 293 LKTAALISKSCRCAAILSGSTPAVVDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSG 352 Query: 227 EDFRNG 232 D + G Sbjct: 353 ADLKLG 358 >gi|302670346|ref|YP_003830306.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio proteoclasticus B316] gi|302394819|gb|ADL33724.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio proteoclasticus B316] Length = 313 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 74/231 (32%), Positives = 112/231 (48%), Gaps = 27/231 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLA--CAIEFIHTATLLHDDV--VD 86 + + Y + +GGKRLRPM+ L A L D V+ A+E IHT +L+HDD+ +D Sbjct: 36 EAMNYSLLAGGKRLRPMMILEAYKLFAGNDADEKVVYPFMAAMEMIHTYSLVHDDLPAMD 95 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-------------KSQEALEAL 133 + RRG+ V+G + L GD LL+ A+ I S L AL Sbjct: 96 NDEYRRGRKTTHAVYGAGMATLAGDGLLNLAYETAINGAMRGTTLSDYDGDNSNRYLAAL 155 Query: 134 SLVAC-----TLAEGELRQLSLSKNLDVTEE---DYLHVI-KSKTAVLFSAALEVSSLIA 184 ++A + G+ + ++ E+ D LH I ++KT L A+L + ++I Sbjct: 156 DILAGKAGIYGMVGGQCADICAENATEIPEDEMKDTLHYIDENKTGALIEASLMIGAVIG 215 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 G ++ G N+GIAFQ+ DD+LD +GK IG D +NGK T Sbjct: 216 GASAQQVSMMEKIGSNVGIAFQIQDDILDITSTSEVLGKPIGSDEKNGKST 266 >gi|300870060|ref|YP_003784931.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli 95/1000] gi|300687759|gb|ADK30430.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli 95/1000] Length = 295 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 120/216 (55%), Gaps = 16/216 (7%) Query: 32 DVVKYLIFSGGKRLRPMLT-LATALMLEYRGD--NHVLLACAIEFIHTATLLHDDV--VD 86 D++KY + +GGKRLRP+LT LA L + GD ++ A ++E IHT +L+HDD+ +D Sbjct: 35 DMLKYPLDAGGKRLRPILTCLACEL---FNGDYKKAIIPAVSLELIHTYSLVHDDLPAMD 91 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 + LRRGK + +G ++LVGD LL+ +F ++ + L + A G + Sbjct: 92 NDDLRRGKPTTHVKYGEANAILVGDGLLTHSFEILSNANVNDKTLRKLLYEISYAAG-VS 150 Query: 147 QLSLSKNLDVTEED------YLHVIKSK-TAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + + +D+ E+ L ++ SK T + A+ V ++ + +N + + YG Sbjct: 151 GMVMGQFIDLYYEERDIDFEMLKILHSKKTGAMIRGAVRVGAIASEKENINLENITKYGE 210 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +G+AFQ+ DD+LD + +GK +G+D + GK T Sbjct: 211 AIGLAFQIQDDILDVISDNETLGKTVGKDEKEGKLT 246 >gi|167583904|ref|ZP_02376292.1| Polyprenyl synthetase [Burkholderia ubonensis Bu] Length = 294 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 12/222 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE--------ALSLVACTLA 141 LRRGK + + T++LVGD L SQAF + + + + AL+ + +A Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALAPAQQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMN 200 G+ L+ S + +T E + + KT L AA+ + +L ++ AL Y Sbjct: 154 GGQAIDLA-SVGMKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADAMAALDVYAAA 212 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D N KPT IL Sbjct: 213 VGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGL 254 >gi|167624992|ref|YP_001675286.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] gi|167355014|gb|ABZ77627.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] Length = 293 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 76/238 (31%), Positives = 116/238 (48%), Gaps = 14/238 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +K+ GGKR+RP L A ML + A AIE IH +L+HDD+ +DD AL Sbjct: 34 AMKHGALIGGKRIRPFLVYAIGDMLGVKLTTLDSCAAAIECIHAYSLIHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVACT----LA 141 RRG+ + + T++L GD L + AF ++ + T SQ +L + + Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQALAFEIISDPIENITPSQNLAMVKALANASGYSGMC 153 Query: 142 EGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ LS + K +++ LH K KT L A+E + + A V RQAL + Sbjct: 154 GGQAMDLSATNKQIELATLIKLH--KLKTGALIRCAVEFAIIAAKVDGQERQALLDFADA 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DDVLD E+GK G D + K T P +L + K + + ++ Sbjct: 212 IGLAFQVQDDVLDIIASTEELGKPQGSDTDSNKSTYPKLLGLEGAQKTASSLIEDALS 269 >gi|300361959|ref|ZP_07058136.1| geranyltranstransferase [Lactobacillus gasseri JV-V03] gi|300354578|gb|EFJ70449.1| geranyltranstransferase [Lactobacillus gasseri JV-V03] Length = 288 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 73/259 (28%), Positives = 131/259 (50%), Gaps = 19/259 (7%) Query: 7 LTLKDMEKV-----NFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 + LKD +K+ + + + S+V+ + ++ Y + +GGKRLRP+L LAT L Y Sbjct: 1 MNLKDFQKIYTPQIDKFLEDHLASEVDNPIFSKIMSYSVMAGGKRLRPLLFLATLETLNY 60 Query: 60 R-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + ++ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL Sbjct: 61 KISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPL 120 Query: 117 AFCMVIETKSQEALEAL---SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS----KT 169 + E + AL + ++ + G+ + S N D+ +E+ + VI KT Sbjct: 121 GIQWITEGSNSAALAIIISQAVGPNGMVGGQYLDID-STNNDLVKEN-VKVIDQMEWLKT 178 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 L A+++++++ AG L ++ G ++Q+ DD++D E GK +D Sbjct: 179 GCLIEASVKMAAVYAGASTDQVDRLDNFSKQFGRSYQIYDDLVDVVETEQEAGKATHKDA 238 Query: 230 RNGKPTLPVILAFQRGTKR 248 GK +L + K+ Sbjct: 239 DEGKNNTLTLLGIEASRKQ 257 >gi|254518734|ref|ZP_05130790.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA] gi|226912483|gb|EEH97684.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA] Length = 291 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 127/241 (52%), Gaps = 13/241 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 ++I D Y + GGKR+RP+L L T + + + + +A AIE IHT +L+HDD+ + Sbjct: 28 KIIYDSASYSLNIGGKRIRPILFLLTYGLYKENYKDVIEMASAIEMIHTYSLIHDDLPCM 87 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE--- 142 D+ LRRG +G +VL GD LL++A ++I+ + +AL L + +AE Sbjct: 88 DNDDLRRGMPTNHKKFGENIAVLAGDMLLNEAMSLMIKFSIKNGAKAL-LASREIAEAAG 146 Query: 143 ------GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 G++ + L +++E+ L++ KT L ++ ++++A + L Sbjct: 147 PEGMIGGQIVDVINEGKL-ISKEELLYMHSKKTGELIRVSIIAAAILADAPKKDIEILND 205 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 +G+ LG+AFQ+ DD+LD G+++++GKN D N K + + + +N K Sbjct: 206 FGLKLGLAFQIKDDILDITGDISKLGKNTKSDENNNKSNFISLFGLEYCERECENLTKEC 265 Query: 257 I 257 I Sbjct: 266 I 266 >gi|307822417|ref|ZP_07652649.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96] gi|307736983|gb|EFO07828.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96] Length = 298 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 118/241 (48%), Gaps = 16/241 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GGKR+RPMLT T L + ACA+EFIH +L+HDD+ L Sbjct: 37 AMRYSTLDGGKRMRPMLTYCTGKTLGIAPEALDGPACAVEFIHVYSLIHDDLPAMDDDDL 96 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL---VACTLAEGELRQ 147 RRGK + + T++L GD L + AF ++ S A L +A T A G Sbjct: 97 RRGKATCHVAFDEATAILTGDALQALAFEILANDPSITATAEGRLKMIIALTKASGSQGM 156 Query: 148 L--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI-AGVQNSVRQALKSYG 198 + S+ L + E + +H+ KT L A++ +++L A + V + L +Y Sbjct: 157 VGGQAIDLESVGTKLTLPELENMHI--HKTGALIRASVNMATLAKADIDPDVAKKLDNYA 214 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G++FQ+ DD+LD + +GK G+D N KPT P +L ++ + + ++ Sbjct: 215 KCIGLSFQVKDDILDEESDTATLGKTQGKDQDNDKPTYPALLGLAGAKQKAQELHEQALD 274 Query: 259 D 259 + Sbjct: 275 N 275 >gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8] gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8] Length = 303 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 76/270 (28%), Positives = 129/270 (47%), Gaps = 31/270 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL------LACAIEFIHTATLLHDDV- 84 + ++Y + GGKR+R L A G + A A+E IH +L+HDD+ Sbjct: 39 EAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAVQASLDRAAAAVELIHAYSLVHDDLP 98 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLVAC 138 +DD LRRG+ + + T++L GD L AF ++ AL ++L+ A Sbjct: 99 CMDDDTLRRGRPTTHVKFDEATAMLAGDALQPLAFDLLASMPIAPALIVQATQSLARAAG 158 Query: 139 T--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + +A G+ L S+ L E +H +K T + + ++ + ++AG ++ RQAL Sbjct: 159 SQGMAGGQAIDLFSVGHALSRDELQTMHSMK--TGAMLACSVALGGIVAGASSASRQALD 216 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 +Y +G+AFQ+VDD+LD + +GK G+D KPT +L G + F + Sbjct: 217 AYAQAVGLAFQVVDDILDVTADSTSLGKTPGKDAAENKPTYVSLL----GLDGARAFAQE 272 Query: 256 TINDGKISVENLKKA---------FIIMRE 276 D ++ L +A FI++R+ Sbjct: 273 LREDALAALAPLGEAGSRLAELADFIVLRD 302 >gi|312862780|ref|ZP_07723020.1| geranyltranstransferase [Streptococcus vestibularis F0396] gi|322516632|ref|ZP_08069546.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124] gi|311101640|gb|EFQ59843.1| geranyltranstransferase [Streptococcus vestibularis F0396] gi|322124902|gb|EFX96326.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124] Length = 290 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 17/222 (7%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDV--VDDSA 89 Y + SGGKR+RP++ L +LE G +H +A ++E IHT +L+HDD+ +D+ Sbjct: 32 YSVDSGGKRIRPLIFLD---LLEGFGLELTPSHFDVAASLEMIHTGSLIHDDLPAMDNDD 88 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG++ + T++L GD L F +V +T+ + + A + A G + Sbjct: 89 YRRGRLTNHKKFDEATAILAGDSLFLDPFALVAQTELSAEIRVQLIQALSYASGTFGMVG 148 Query: 150 LSKNLDVTEEDY-------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + LD+ ED + ++KT L + + +++ ++ V + LK G +G Sbjct: 149 -GQMLDMKGEDLELDLSQLAKIHENKTGKLLTFPFVAAGIVSQQEDRVMENLKEAGRLIG 207 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +AFQ+ DD+LD + E+GK G+D GK T P +L ++ Sbjct: 208 LAFQVRDDILDVTADFEELGKTPGKDVVAGKSTYPALLGLEK 249 >gi|257869058|ref|ZP_05648711.1| geranyltranstransferase [Enterococcus gallinarum EG2] gi|257803222|gb|EEV32044.1| geranyltranstransferase [Enterococcus gallinarum EG2] Length = 294 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 83/268 (30%), Positives = 128/268 (47%), Gaps = 26/268 (9%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ ++ L ++E V L+ SD + + D + Y I +GGKR+RP+L AT Sbjct: 1 MQQFQEKYLSEIEAVIVRFLEEHTSD-QTLKDSMLYSIHAGGKRIRPLLLTATVASFHKS 59 Query: 61 GDNHVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 V A A+E IHT +L+HDD+ +DD ALRRGK V+G ++L GD LL+ A Sbjct: 60 MTLGVYQTAAALEMIHTYSLIHDDLPAMDDDALRRGKPTNHKVYGEALAILAGDGLLTAA 119 Query: 118 FCMVI-----ETKSQEALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLH 163 F ++ K L+ LS A T +GE +QL+L + + + E Sbjct: 120 FQLLSLADLEPDKKILLLQQLSHTAGTAGMVAGQAADIQGENQQLTLDELISIHER---- 175 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 KT L A+ ++A V Q L + ++G+AFQ+ DD+LD +GK Sbjct: 176 ----KTGELIRFAVIAGGILADQTEEVIQLLDQFARHMGLAFQIRDDLLDVTSTTEVLGK 231 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKN 251 + D K T P +L ++ K+ Sbjct: 232 IVHRDDALAKSTYPALLGLDGASEALKD 259 >gi|221053263|ref|XP_002258006.1| polyprenyl synthetase [Plasmodium knowlesi strain H] gi|193807838|emb|CAQ38543.1| polyprenyl synthetase, putative [Plasmodium knowlesi strain H] Length = 522 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 2/184 (1%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G N + A E IH +LLHDDV+DDS RRG +A +GN+ S+L GDFLL++A + Sbjct: 246 GVNQCRIIAASEIIHMGSLLHDDVIDDSNNRRGALALHKKYGNKISILSGDFLLARASSV 305 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + V +L +GEL Q +L N++ + Y KTA LFS Sbjct: 306 FASIGCPQICKRFAYVVESLIKGELLQTNLKFNNIEDALKTYFIKTYHKTASLFSHLFAC 365 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++++ + + G+++G+AFQL DD LDY+ + + K I D N T P + Sbjct: 366 MAILSFKNEKIINLCFNLGLHIGMAFQLYDDYLDYKPD-KKTNKPILNDLNNSIKTAPFL 424 Query: 240 LAFQ 243 ++ Sbjct: 425 FSYN 428 >gi|225848385|ref|YP_002728548.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Sulfurihydrogenibium azorense Az-Fu1] gi|225643069|gb|ACN98119.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Sulfurihydrogenibium azorense Az-Fu1] Length = 288 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 118/229 (51%), Gaps = 10/229 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGD--NHVLLACAIEFIHTATLLHDDVVDDSA 89 D ++Y + GGKR+RP+L + ++ + D + + +A ++EFIHT +L+HDD+ Sbjct: 33 DAMEYSLTVGGKRIRPILIIESSKAVNPDVDIEDFIDVALSVEFIHTYSLIHDDLPAMDD 92 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRGK V+G ++L GD LL+ AF ++ + + L ++ + Sbjct: 93 DDLRRGKPTCHKVFGEAIAILAGDGLLTYAFELISGNQKITPDKLLKVINVISNSVGVYG 152 Query: 148 LSLSKNLDVTEE----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + D+ E D++H KTA S +V ++AG + LK+YG+ +GI Sbjct: 153 MVGGQAGDILENFKDIDFIHT--HKTAKFISGCCQVGGILAGASKKEIENLKNYGLYIGI 210 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 AFQ+ DD+LD G+ ++GK + +D K T P + K K++ Sbjct: 211 AFQIWDDILDEIGDEEKVGKKLHKDKEKNKITYPSVYGLDNSIKMAKDY 259 >gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72] gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72] Length = 300 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 117/220 (53%), Gaps = 14/220 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + GGKR+RP+L A + + + +ACA+E IH +L+HDD+ + Sbjct: 36 ERLHEAMRYAVLGGGKRVRPLLVHAAGAIGGAQPERLDRIACAVELIHAYSLVHDDMPCM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQE----ALEALSLV 136 DD LRRGK + + + T++LVGD L + AF V + +++ L A++ Sbjct: 96 DDDVLRRGKPTVHVEYDDATALLVGDALQTLAFQVLASAPVTDMPTRQLGMIGLLAMASG 155 Query: 137 ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + +A G+ L ++ + LD+ E +++H+ KT L ++ + + V + L Sbjct: 156 SRGMAGGQAIDLAAVGRQLDLRELEFMHI--HKTGALIRCSVLLGAQAGTVDGETLERLD 213 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 Y G+ FQ+VDD+LD + +GK G+D + KPT Sbjct: 214 RYAKLTGLLFQVVDDILDAEADTATLGKTAGKDADHDKPT 253 >gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121] gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121] Length = 293 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 20/226 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDV--VD 86 + ++Y +F+GGKR+RPMLT A+A ++ GD L A A+E IH +L+HDD+ +D Sbjct: 33 NAMRYSLFNGGKRIRPMLTYASAQLV---GDISSLTDASAAALESIHAYSLIHDDLPAMD 89 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA--------C 138 + LRRGK + + T++L GD L + AF ++ S + A+ L+ Sbjct: 90 NDELRRGKPTCHIQFDEATAILAGDALQTFAFELLSNPTSAQPELAIKLIQELVVASGRN 149 Query: 139 TLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKS 196 + G++ LS +KN+ + E + +HV KT L A++ + +L G V+ L + Sbjct: 150 GMITGQMIDLSSENKNISLAELEQMHV--HKTGALIKASVRMGALSTGQVKPEQLAKLDA 207 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 Y +G+AFQ+ DD++D + +GK D K T P +L Sbjct: 208 YAHAIGLAFQVQDDIIDLTSDTETLGKTQFSDAEANKATYPKLLGL 253 >gi|254168668|ref|ZP_04875510.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469] gi|289596800|ref|YP_003483496.1| Polyprenyl synthetase [Aciduliprofundum boonei T469] gi|197622294|gb|EDY34867.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469] gi|289534587|gb|ADD08934.1| Polyprenyl synthetase [Aciduliprofundum boonei T469] Length = 350 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 79/315 (25%), Positives = 151/315 (47%), Gaps = 31/315 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++++ GGKR+R +L + M+ + D + + ++E I + L+HDD++D+S LR Sbjct: 39 EILEEYTLRGGKRIRAILMIVGYKMMGGKNDEIIKASSSLELIQSYLLIHDDIMDESDLR 98 Query: 92 RGKVAARLVW----------------GNQTSVLVGDFLLSQAFCMVIETKSQ-------E 128 RGK ++ G +++ GD L+ A+ M I + S + Sbjct: 99 RGKDTVHKIYEKKHLKNGFGGRPIRFGESMAIIAGD--LANAYAMEILSSSDFPAELKVK 156 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQ 187 A+ L+ + G++ + + EED L + K KTA L + ++AG + Sbjct: 157 AIHKLNEIIEYTGYGQIIDIYSGALEEFKEEDLLLLHKYKTARYTIEGPLALGIILAGKE 216 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + +++Y + +GIAFQL DD+L G +GK + D GK TL +I A + G++ Sbjct: 217 P---EGIENYAIPVGIAFQLQDDILGLFGSEEGIGKPVTSDLAEGKKTLLIIKALENGSE 273 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL--PDSS 305 ++ + + ++ E L+K I+R +L ++ A ++AKD L+ + D Sbjct: 274 EDRKIIMQALGNPAVTYEQLEKVREIVRRTGSLDYSKNLAKKMVEEAKDYLKGIEVEDEE 333 Query: 306 WKKSLMEVVDFCLQR 320 + L+ + D+ + R Sbjct: 334 MRDFLLWLADYMISR 348 >gi|238022838|ref|ZP_04603264.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147] gi|237866041|gb|EEP67177.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147] Length = 295 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 75/256 (29%), Positives = 122/256 (47%), Gaps = 18/256 (7%) Query: 19 ILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +L+++ + + P + ++Y GGKRLRPML LA A + A+E I Sbjct: 18 VLQQMLPETALAPQGLHEAMRYAALDGGKRLRPMLVLAAAELGNRVQAACEAALAAVECI 77 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 H +L+HDD+ +D+ LRRGK + +G T++LVGD L + AF ++ A Sbjct: 78 HVYSLVHDDMPEMDNDTLRRGKPTCHVAYGAATALLVGDALQTLAFELLSRQTDLPAARQ 137 Query: 133 LSLV--------ACTLAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL- 182 L ++ + +A G+ L+ + +L + +H +K T L AA+++ +L Sbjct: 138 LRMLNVLARASGSTGMAGGQAIDLANVGHDLPQDALEQMHSLK--TGALIRAAVQLGALS 195 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 V + AL Y LG+AFQ++DDVLD + +GK G+D KPT +L Sbjct: 196 CPDVDEAALAALDEYAAKLGLAFQVIDDVLDCAADTTTLGKTAGKDADADKPTYVKLLGL 255 Query: 243 QRGTKREKNFWKSTIN 258 + IN Sbjct: 256 DAARGYAEQLAADAIN 271 >gi|264679659|ref|YP_003279566.1| polyprenyl synthetase [Comamonas testosteroni CNB-2] gi|262210172|gb|ACY34270.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2] Length = 324 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 114/224 (50%), Gaps = 13/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKRLRP+L A A + + CA+E IH +L+HDD+ +D+ Sbjct: 62 EAMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDT 121 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVACT---L 140 +RRGK + +G +++L GD L + AF ++ I Q L L A + Sbjct: 122 MRRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGM 181 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A G+ L S+ K+L + +H +K+ A+L + L ++ A AL YG Sbjct: 182 AGGQAIDLASVGKHLSEAQLREMHRLKTG-ALLLGSVLMGAACNAQTDARALAALTDYGQ 240 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+AFQ+VDD+LD + +GK G+D N KPT +L + Sbjct: 241 ALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPTFVSLLGLE 284 >gi|238852560|ref|ZP_04642970.1| farnesyltranstransferase [Lactobacillus gasseri 202-4] gi|238834706|gb|EEQ26933.1| farnesyltranstransferase [Lactobacillus gasseri 202-4] Length = 288 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 129/257 (50%), Gaps = 14/257 (5%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60 L+D K +++ + + S+V+ + ++ Y + +GGKRLRP+L LAT L Y+ Sbjct: 3 LKDFQKKYTPQIDKFLEDHLASEVDNPIFSKIMSYSVMAGGKRLRPLLFLATLETLNYKI 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 ++ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL Sbjct: 63 SESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHRKWGEAEAILAGDALLPLGI 122 Query: 119 CMVIETKSQEALEAL---SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS----KTAV 171 + E + AL + ++ + G+ + S N D+ +E+ VI KT Sbjct: 123 QWITEGSNSAALAIIISQAVGPNGMVGGQYLDID-STNNDLVKEN-AKVIDQMEWLKTGC 180 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L A+++++++ AG L ++ G ++Q+ DD++D E GK +D Sbjct: 181 LIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVETEQEAGKATHKDADE 240 Query: 232 GKPTLPVILAFQRGTKR 248 GK +L + K+ Sbjct: 241 GKNNTLTLLGIEASRKQ 257 >gi|297159283|gb|ADI08995.1| putative polyprenyl diphosphate synthase [Streptomyces bingchenggensis BCW-1] Length = 380 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 79/258 (30%), Positives = 120/258 (46%), Gaps = 24/258 (9%) Query: 1 MKMLED--LTLKD----------MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPM 48 M +LE L+L+D + V +L+ SDV I + ++L+ +G KRLRP+ Sbjct: 1 MTLLEPMGLSLRDRTVEAGVRAGLAAVEAGLLEATKSDVPFITEAAQHLVRAGAKRLRPL 60 Query: 49 LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108 L L A + V A +E H ATL HDDV+DD+ RR A W N +VL Sbjct: 61 LVLLAARFGDPDAPGVVPSAVVVELTHLATLYHDDVLDDADARRRTPATDANWDNSVAVL 120 Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVI 165 GDFL ++A ++ + EA+ + A + G++ + + E YL V+ Sbjct: 121 TGDFLFARASHLLADLGP----EAVRIQADAFRQQVTGQILETAGPSGDRDPIEHYLEVL 176 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG--- 222 + L + + + +L +G V L YG LG+A +L +DVLD E G Sbjct: 177 AGRAGSLIAVSGRLGALASGAGREVAGVLARYGERLGVACRLAEDVLDI-AEAGGAGGVP 235 Query: 223 -KNIGEDFRNGKPTLPVI 239 + G R G TLPV+ Sbjct: 236 RGHPGAALREGFATLPVL 253 >gi|297584556|ref|YP_003700336.1| polyprenyl synthetase [Bacillus selenitireducens MLS10] gi|297143013|gb|ADH99770.1| Polyprenyl synthetase [Bacillus selenitireducens MLS10] Length = 297 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 76/238 (31%), Positives = 119/238 (50%), Gaps = 27/238 (11%) Query: 31 PDVVK----YLIFSGGKRLRPMLTLAT------ALMLEYRGDNHVLLACAIEFIHTATLL 80 PD++K Y + +GGKR+RP+L L+ L YR A A+E IHT +L+ Sbjct: 32 PDILKESMLYSLNAGGKRIRPVLLLSVLHAAGKPLEAGYR------TAAALELIHTYSLI 85 Query: 81 H--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 H +DD LRRGK V+G ++L GD LL+ +F ++ + + A ++L+A Sbjct: 86 HDDLPAMDDDDLRRGKPTNHKVYGEDIAILAGDGLLTHSFNLISKDEHLSADLKVALIAD 145 Query: 139 --------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ + + ++T E+ + KT L S +L IAG+ Sbjct: 146 ITDAAGPEGMVGGQVSDMQ-GEGKELTAEELEAIHHRKTGDLLSVSLMAGGKIAGLNEED 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + L G +LG+AFQ+ DD+LD G V E+GK +G D N K T P +L K+ Sbjct: 205 NKYLSLLGKHLGLAFQIKDDLLDIEGTVEEIGKPVGSDAGNDKNTYPSLLGLDGAKKK 262 >gi|238795560|ref|ZP_04639075.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969] gi|238720679|gb|EEQ12480.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969] Length = 306 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 43/298 (14%) Query: 13 EKVNFLILKRIC----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 ++VN +L I D +++ + ++Y GGKRLRP L AT M N A Sbjct: 19 QRVNQALLDFIAPLPFGDSDLV-EAMRYGAVLGGKRLRPYLVYATGQMFGLSLVNLDAPA 77 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 AIE IH +L+HDD+ +D+ LRRG+ + +G ++L GD L + AF ++ E Sbjct: 78 AAIECIHAYSLIHDDLPAMDNDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEADM 137 Query: 127 QEALEA--LSLVACTLA----------------EGELRQLSLSKNLDVTEEDYLHVIKSK 168 + + L++VA LA E E RQ+SL+ D + + K Sbjct: 138 SDVADKDRLAMVA-ELARASGVAGMCGGQALDLEAEARQISLA--------DLEQIHRHK 188 Query: 169 TAVLFSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 T L AA+ + +L AG + + L Y +G+AFQ+ DD+LD G+ +GK G Sbjct: 189 TGALIRAAVRLGALAAGERGRAALPFLDRYAEAIGLAFQVQDDILDVIGDTATIGKRQGS 248 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI-SVENLKKA-------FIIMREN 277 D + GK T P ++ + + ++ ++ I S ++ A FII R+N Sbjct: 249 DQQLGKSTYPALMGLDCAKAKAMDLYQEALSALNILSAQSYNIAPLQALACFIIERDN 306 >gi|76800954|ref|YP_325962.1| multifunctional long-chain (E)-prenyl diphosphate synthase [Natronomonas pharaonis DSM 2160] gi|76556819|emb|CAI48393.1| probable multifunctional long-chain (E)-prenyl diphosphate synthase [Natronomonas pharaonis DSM 2160] Length = 291 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 30/271 (11%) Query: 12 MEKVNFLILKRI-----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62 +E+ L+ R+ ++ + + D ++++ SGGKR+RPM+ L L E G Sbjct: 4 LERRRALVESRLEAVLDATEPDAMTDRLEHVSLSGGKRVRPMVAL---LAFEAAGGELVG 60 Query: 63 ----------NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF 112 N + A IE +H A+L+ DD++D+S LRRG +A +G ++ D Sbjct: 61 EDGRGSEPSRNAIDFAVGIELVHNASLVVDDIIDESELRRGVDSAWAAFGYGPAITTSDG 120 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 LL +AF + + A+ ++ L EGE +L + +E Y+ + + KT L Sbjct: 121 LLGEAFSLF--SADPRAMRTVAEAMVELGEGEATELVERPD---SEAAYMELARRKTGAL 175 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 F AA E+ ++ A A Y +GIAFQ+ DDVLD + +++GK G+D Sbjct: 176 FRAAAELGAIAADADTYAVDAFGQYAERVGIAFQIRDDVLDATADADDLGKPTGQDAEME 235 Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 +P++ I + E N T +D +S Sbjct: 236 RPSVVQITDM---SPDEANERARTESDAALS 263 >gi|289663219|ref|ZP_06484800.1| polyprenyl synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668286|ref|ZP_06489361.1| polyprenyl synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 291 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 10/219 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKR+RP+L A+ + D A A+E IH +L+HDD+ +DD AL Sbjct: 34 AMRYAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG+ + + T++L GD L ++AF ++ + L + + + Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTRAFELLAAASTSAELR-VGWMQSLATAAGAAGMCG 152 Query: 151 SKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + LD+ L ++ KT L AA+ + +L G +Q L ++ LG+ Sbjct: 153 GQALDMDATGQLQPLQDLQRMHALKTGALIRAAVRMGALTGGAAADDQQRLGAFADALGL 212 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AFQ+ DD+LD ++GK G+D K T P +L Sbjct: 213 AFQVRDDILDVESSSAQLGKTAGKDAAQSKSTYPALLGM 251 >gi|254228604|ref|ZP_04922028.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] gi|262395026|ref|YP_003286880.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] gi|151938783|gb|EDN57617.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] gi|262338620|gb|ACY52415.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] Length = 294 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 71/239 (29%), Positives = 117/239 (48%), Gaps = 14/239 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +KY + GGKR+RP L T ML + ++ A AIE IH +L+HDD+ +DD L Sbjct: 33 AMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDEL 92 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----------ALSLVACTL 140 RRG+ + + T++L GD L + AF ++ + + A E A S A + Sbjct: 93 RRGQPTCHIKFDEATAILTGDALQTLAFTIIADGQLNPAAETQRINMIKALAHSSGANGM 152 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 G+ L ++N V+ E+ + + KT L A+++ +L AG + V L+ Y Sbjct: 153 CVGQALDLG-AENRQVSLEEMEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSK 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L + ++ + + Sbjct: 212 AIGLAFQVQDDILDIISDTETLGKPQGSDQGLNKSTYPSLLGLEGAIEKAHTLLQEALQ 270 >gi|256828745|ref|YP_003157473.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028] gi|256577921|gb|ACU89057.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028] Length = 295 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 119/223 (53%), Gaps = 16/223 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA-- 89 ++Y + +GGKRLRP+L LA A + G H +L ACAIE IHT +L+HDD+ Sbjct: 38 MEYSLMAGGKRLRPVLCLAWAELAG--GSVHAVLDFACAIECIHTYSLIHDDLPAMDDDD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEA---LSLVACT--LAE 142 LRRGK + + T++L GD LL++AF + +E + + L+A LS A + Sbjct: 96 LRRGKPSNHKRFDEATAILAGDGLLTEAFTLASSLELRPERILKAVFHLSTAAGPRGMVG 155 Query: 143 GELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G++ + L+ K+ + + +H KT L + ++ G +S + YG + Sbjct: 156 GQVLDMGLTGKSASLPQLREMHA--KKTGALIETSCVTGCVLGGGDDSEQAKASEYGRAI 213 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G+AFQ+ DD+LD G+ +GK +G D GK T P +L + Sbjct: 214 GLAFQVTDDILDVIGDEAALGKPVGSDVAQGKSTYPALLGIDQ 256 >gi|116629411|ref|YP_814583.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC 33323] gi|282850888|ref|ZP_06260262.1| polyprenyl synthetase [Lactobacillus gasseri 224-1] gi|116094993|gb|ABJ60145.1| farnesyl-diphosphate synthase [Lactobacillus gasseri ATCC 33323] gi|282557840|gb|EFB63428.1| polyprenyl synthetase [Lactobacillus gasseri 224-1] Length = 288 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 129/257 (50%), Gaps = 14/257 (5%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR- 60 L+D K +++ + + S+V+ + ++ Y + +GGKRLRP+L LAT L Y+ Sbjct: 3 LKDFQKKYTPQIDKFLEDHLASEVDNPIFSKIMSYSVMAGGKRLRPLLFLATLETLNYKI 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 ++ + +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL Sbjct: 63 SESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGI 122 Query: 119 CMVIETKSQEALEAL---SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS----KTAV 171 + E + AL + ++ + G+ + S N D+ +E+ VI KT Sbjct: 123 QWITEGSNSAALAIIISQAVGPNGMVGGQYLDID-STNNDLVKEN-AKVIDQMEWLKTGC 180 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L A+++++++ AG L ++ G ++Q+ DD++D E GK +D Sbjct: 181 LIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVETEQEAGKATHKDADE 240 Query: 232 GKPTLPVILAFQRGTKR 248 GK +L + K+ Sbjct: 241 GKNNTLTLLGIEASRKQ 257 >gi|222087742|ref|YP_002546279.1| geranyltranstransferase protein [Agrobacterium radiobacter K84] gi|221725190|gb|ACM28346.1| geranyltranstransferase protein [Agrobacterium radiobacter K84] Length = 304 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 120/237 (50%), Gaps = 19/237 (8%) Query: 19 ILKRICSDVEM---------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +L R+ +D + + + +++ + +GGKRLRP L + TA +L D + + Sbjct: 22 VLSRLLADARLNDEIARPARLLEAMRHGVLNGGKRLRPFLVMETAALLGGNADAALRIGA 81 Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A+E +H +L+HDD+ LRRG+ + + T++L GD LL+ AF ++ ++ Sbjct: 82 ALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDYATAILAGDSLLTYAFDIIAAPETD 141 Query: 128 -------EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEV 179 E + ALS A + L L+ +E + +++ KT L A E Sbjct: 142 LPADRKMELVLALSRAAGIGGMAGGQALDLAAEKVTPDEQGITTLQAMKTGALIRFACEA 201 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +++AG RQ L+S+G +G+AFQL DD+LD + MGK G+D GK TL Sbjct: 202 GAIMAGASAGDRQRLRSFGEKIGLAFQLADDLLDLTADAATMGKATGKDAARGKGTL 258 >gi|73667942|ref|YP_303957.1| polyprenyl synthetase [Methanosarcina barkeri str. Fusaro] gi|72395104|gb|AAZ69377.1| polyprenyl synthetase [Methanosarcina barkeri str. Fusaro] Length = 285 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 128/247 (51%), Gaps = 11/247 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 + +++ +GGKR+RP++ L ++ + + A AIE +H+A+L+HDD++D +RR Sbjct: 31 MAEHVCNTGGKRIRPIILLLSSEICSGSYQQSLNAALAIELMHSASLIHDDLLDQGLVRR 90 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 +A +G ++L GD+L+++ F I ++ + +AEGE+ L L K Sbjct: 91 NLPSAPEKFGPSRALLCGDYLIAKCF-EFISPYGEKVVRDFGKAGMDMAEGEVLDLRLDK 149 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + + E +Y I KTA LF+ + + + G + + +G LG A+Q+VDD+L Sbjct: 150 D-NFGENNYFECIYKKTASLFAISASIGAYTGGADEVLAERFNFFGNCLGTAYQIVDDIL 208 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 ++ EV E G++ + TLP + + + +E+ KST + K+ V K A + Sbjct: 209 EFL-EVVE-----GKESKFTSETLPHV--YMKNMSKEEAIEKST-DAVKLRVNAAKDALL 259 Query: 273 IMRENRA 279 E A Sbjct: 260 TFNECPA 266 >gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor] gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor] Length = 371 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 27/249 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D ++Y + +GGKR+RP L LA ++ + A A+E +HT +L+HDD+ Sbjct: 101 DAMRYALLAGGKRVRPALCLAACAVVGGPEAWAMPAAAAVEMVHTMSLVHDDLPCMDDDD 160 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----------ETKSQEALEALS-LVA 137 LRRGK +V+G +VL GD LLS +F + E + A+ L Sbjct: 161 LRRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPDVDPEKHPARVVRAIGELAR 220 Query: 138 CTLAEG-------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 C +EG +L S+ + + +Y+H+ KTA L A++ + ++I G + Sbjct: 221 CIGSEGLVAGQVVDLEMTGTSEPVPLERLEYIHL--HKTAALLEASVVIGAIIGGGTDEQ 278 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ Y ++G+ FQ+VDD+LD E+GK G+D + K T P +L G ++ + Sbjct: 279 IERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLL----GLEKSR 334 Query: 251 NFWKSTIND 259 F + ++D Sbjct: 335 EFAEKLLSD 343 >gi|117508|sp|P22873|CRTE_ESCVU RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; AltName: Full=Farnesyltranstransferase gi|148400|gb|AAA24819.1| phytoene synthase [Pantoea agglomerans] gi|148408|gb|AAA64977.1| pyrophosphate synthase [Pantoea agglomerans] Length = 307 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 114/211 (54%), Gaps = 18/211 (8%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDDSALRRG 93 + + GKR+RP+L L A L Y+G LL ACA+E HTA+L+ DD+ +D++ LRRG Sbjct: 47 VMAPGKRIRPLLMLLAARDLRYQGSMPTLLDLACAVELTHTASLMLDDMPCMDNAELRRG 106 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIET------KSQEALEALSLVACT--LAEGEL 145 + +G ++L LLS+AF ++ T + +A+ LS L G+ Sbjct: 107 QPTTHKKFGESVAILASVGLLSKAFGLIAATGDLPGERRAQAVNELSTAVGVQGLVLGQF 166 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 R L+ LD T + L KT +LFSA L++ ++ + S R+ L ++ ++ G AF Sbjct: 167 RDLN-DAALDRTPDAILSTNHLKTGILFSAMLQIVAIASASSPSTRETLHAFALDFGQAF 225 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 QL+DD+ R + E GK+ +D GK TL Sbjct: 226 QLLDDL---RDDHPETGKDRNKD--AGKSTL 251 >gi|168020145|ref|XP_001762604.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686337|gb|EDQ72727.1| predicted protein [Physcomitrella patens subsp. patens] Length = 340 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 150/328 (45%), Gaps = 46/328 (14%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRPMLTLATALM----------------LEYRGDNH 64 + ++V ++ +Y G GKR RP + L + + L +R Sbjct: 27 VTAEVSVLSLAAEYFFKMGVEGKRFRPTVLLLMSTLLMTSPAHGLQDLIFDDLRFRQQR- 85 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +A IE IH A+LLHDDV+D + RRG + GN+ V FLL++A + Sbjct: 86 --IAEIIEMIHVASLLHDDVLDHADTRRGISSLNHAMGNK--VCAAIFLLARASVTLSSL 141 Query: 125 KSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + +E LS V L GE+ QLS N DV + KTA L + + + Sbjct: 142 RNTQVVELLSQVLEHLVTGEIMQLSSEYKNMSNFDVISWKTFY----KTASLMANSCKSI 197 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG V YG +LG+A+QLVDD L+Y G +GK+ D G T PV+ Sbjct: 198 AVLAGQPEEVANRAFDYGRHLGLAYQLVDDALNYTGTTKTLGKSALSDLGQGVVTAPVLF 257 Query: 241 AFQRGTKREK--NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 A + + K T D +VE ++++++ + T A + QKA D++ Sbjct: 258 ALHQFPEMSKLIQLKFKTATDRNQAVE-------MVKQSQGVAQTLAFATVHAQKAVDAI 310 Query: 299 RCLPDSS------WKKSLMEVVDFCLQR 320 LP +S +++L+E+ + R Sbjct: 311 ISLPPNSSLYVQQCRRALIEIAHQVITR 338 >gi|187250684|ref|YP_001875166.1| geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum Pei191] gi|186970844|gb|ACC97829.1| Geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum Pei191] Length = 334 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 48/296 (16%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 +I + E+I D + Y + +GGKR+RP+L +A A + + + ACA+E +HT +L+H Sbjct: 25 KIANSPEVIKDSMAYSLEAGGKRVRPVLVMAAAEAFGKKAADVMPAACAVEMVHTYSLIH 84 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET---KS---QEALEAL 133 DD+ +D+ +LRRGK V+G ++L GD LL+ AF + + KS + L+AL Sbjct: 85 DDLPSMDNDSLRRGKPTNHKVYGEDLALLAGDALLTYAFEVFAQNGDVKSIGHKNTLKAL 144 Query: 134 SLVAC------------------TLAEGELRQLS--------LSKNL-----------DV 156 L A L EG+ ++++ LSK +V Sbjct: 145 QLFANGVGSEGMVGGQVTDIYAEGLIEGKFKRITAVKKESKALSKKSVKYFLMPAKLKEV 204 Query: 157 TEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 + E L I + KT L +++E +++AG + R ++ YG +G+AFQ+VDD+LD Sbjct: 205 SAETVLSYIHANKTGALIRSSIEAGAVLAGASEADRANMRKYGNAMGLAFQIVDDILDVT 264 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND-GKISVENLKKA 270 ++GK+ G D N K T + + K K +N K+ N KKA Sbjct: 265 VSEKKLGKS-GSDKENAKLTFVSLYGLEVSRKYAKAVLGEAVNALNKVKAINKKKA 319 >gi|167746999|ref|ZP_02419126.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662] gi|167653959|gb|EDR98088.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662] Length = 297 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 28/228 (12%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV--VDDSALRRGKV 95 +GGKRLRPML T M + G V+ AIE IHT +L+HDD+ +D+ RRG+ Sbjct: 43 AGGKRLRPMLMEETYKM--FGGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQK 100 Query: 96 AARLVWGNQTSVLVGDFLLSQAF-----CMVIE----TKSQEALEALS-------LVACT 139 +V+G ++L GD LL+ AF +E K EA+ L+ ++ Sbjct: 101 TCHIVYGEDMAILAGDALLNYAFETASSAFALEDADLPKVAEAIRILARKPGIYGMIGGQ 160 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A+ EL LS E + + +KT+ L A + + +++AG +A++ G Sbjct: 161 AADVELEGTVLSM------EQIMFIHHNKTSALIEACMMIGAVLAGASPEDVKAMEECGR 214 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +G+AFQ+ DD+LD G+ +GK +G D +N K T I ++ K Sbjct: 215 KIGLAFQIQDDILDITGQEEVIGKPVGSDEKNQKTTYVSIKGLEQAGK 262 >gi|269962343|ref|ZP_06176693.1| geranyltranstransferase [Vibrio harveyi 1DA3] gi|269832839|gb|EEZ86948.1| geranyltranstransferase [Vibrio harveyi 1DA3] Length = 294 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 125/257 (48%), Gaps = 20/257 (7%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L L+++ + + +KY + GGKR+RP L T ML + ++ A A+E IH Sbjct: 18 LWLEQLPHQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAVECIHAY 77 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQEA 129 +L+HDD+ +DD LRRG+ + + T++L GD L + AF ++ E +SQ Sbjct: 78 SLIHDDLPAMDDDELRRGQPTCHIKFDEATAILTGDALQTLAFTILAEGELNPNAESQRI 137 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSL 182 +L + A G + L + LD+ E D + ++KT L + A+++ +L Sbjct: 138 KMVQALAQASGASG----MCLGQALDLGAENRRVSLADLEEIHRNKTGALINCAVKLGAL 193 Query: 183 IAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 AG + V L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L Sbjct: 194 AAGEKGLEVLPHLERYSKAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLLG 253 Query: 242 FQRGTKREKNFWKSTIN 258 + ++ + + Sbjct: 254 LEGAMEKAHTLLQEALQ 270 >gi|114705301|ref|ZP_01438209.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506] gi|114540086|gb|EAU43206.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506] Length = 315 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 15/219 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + D + + + GKRLRP+L + TA+ L + + CAIE IHTA+L+ DD+ + Sbjct: 32 EQLRDAIATSVLAPGKRLRPLLAVLTAIDLNGDVEAAIEGGCAIELIHTASLVLDDLPCM 91 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS------QEALEALSLVACT 139 DD+ LRRG+ + +G T++L ++S+AF ++ S ++ AL T Sbjct: 92 DDATLRRGQPPTHVAYGEDTALLAVIAMISRAFELLAAAPSLNPEQRTRSVAALGKAVGT 151 Query: 140 --LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L G+ L K + + KT LF AA+E+ + +G R+ L+++ Sbjct: 152 SGLVAGQFADL---KGGSGSTDAAARTNALKTGALFLAAVEIGMIGSGAPRETRRELEAF 208 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 LG+AFQL+DD+LD +GK+IG+D GK T+ Sbjct: 209 ARELGLAFQLLDDLLDGSQTAVSIGKDIGQD--AGKSTI 245 >gi|53716444|ref|YP_105136.1| geranyltranstransferase [Burkholderia mallei ATCC 23344] gi|67643212|ref|ZP_00441960.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4] gi|121597567|ref|YP_991106.1| geranyltranstransferase [Burkholderia mallei SAVP1] gi|124382622|ref|YP_001025504.1| geranyltranstransferase [Burkholderia mallei NCTC 10229] gi|126446017|ref|YP_001077567.1| geranyltranstransferase [Burkholderia mallei NCTC 10247] gi|167000281|ref|ZP_02266100.1| geranyltranstransferase [Burkholderia mallei PRL-20] gi|254177164|ref|ZP_04883820.1| geranyltranstransferase [Burkholderia mallei ATCC 10399] gi|254203074|ref|ZP_04909436.1| geranyltranstransferase [Burkholderia mallei FMH] gi|254208407|ref|ZP_04914756.1| geranyltranstransferase [Burkholderia mallei JHU] gi|254359405|ref|ZP_04975677.1| geranyltranstransferase [Burkholderia mallei 2002721280] gi|52422414|gb|AAU45984.1| geranyltranstransferase [Burkholderia mallei ATCC 23344] gi|121225365|gb|ABM48896.1| geranyltranstransferase [Burkholderia mallei SAVP1] gi|126238871|gb|ABO01983.1| geranyltranstransferase [Burkholderia mallei NCTC 10247] gi|147746119|gb|EDK53197.1| geranyltranstransferase [Burkholderia mallei FMH] gi|147751094|gb|EDK58162.1| geranyltranstransferase [Burkholderia mallei JHU] gi|148028592|gb|EDK86552.1| geranyltranstransferase [Burkholderia mallei 2002721280] gi|160698204|gb|EDP88174.1| geranyltranstransferase [Burkholderia mallei ATCC 10399] gi|238524497|gb|EEP87930.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4] gi|243063768|gb|EES45954.1| geranyltranstransferase [Burkholderia mallei PRL-20] gi|261826895|gb|ABN00184.2| geranyltranstransferase [Burkholderia mallei NCTC 10229] Length = 294 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 118/223 (52%), Gaps = 14/223 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + + A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-----QEALE---ALSLVACTLA 141 LRRGK + + T++LVGD L SQAF + + + Q AL AL+ + +A Sbjct: 94 LRRGKPTVHVKYDEPTALLVGDALQSQAFVALTDAAALPADRQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS--VRQALKSYGM 199 G+ L+ S + +T + + + KT L A++ + +L AG S +AL +Y Sbjct: 154 GGQAIDLA-SVGVALTRDALEKMHRMKTGALLRASVRMGAL-AGETPSGDAMRALDAYAA 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D N KPT I+ Sbjct: 212 AVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGL 254 >gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp. lyrata] gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp. lyrata] Length = 337 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 20/241 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + ++Y + SGGKR+RPML L ++ + + ACA+E IH ++L+ DD+ +DD Sbjct: 68 VREAMRYTLLSGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHASSLILDDLPCMDD 127 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS------------QEALEALSL 135 +LRRGK V+G +T++L + L+S A + + S QE A+ + Sbjct: 128 DSLRRGKPTNHKVFGEKTAILAANALMSLAVEQTLASTSLGVTSERVLRAVQEMARAVGI 187 Query: 136 VACTLAEGELRQLSLSKNLDVTEED---YLHVIK-SKTAVLFSAALEVSSLIAGVQNSVR 191 L G+ L+ + TE++ YL I KTAVL AA V +++ G + Sbjct: 188 EG--LVAGQAADLAGGRMSFETEDEGLRYLEFIHIHKTAVLVEAAAVVGAIMGGGSDEEI 245 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + LKSY +G+ FQ++DDVLD E+GK G+D GK T P ++ + + K Sbjct: 246 ERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKVMGVENAREYAKR 305 Query: 252 F 252 Sbjct: 306 L 306 >gi|111220885|ref|YP_711679.1| geranylgeranyl pyrophosphate synthetase [Frankia alni ACN14a] gi|111148417|emb|CAJ60089.1| geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (GGPPSASE) (Geranylgeranyl diphosphate synthase) [Includes: Dimethylallyltranstransferase; Geranyltranstransferase; Farnesyltranstransferase] [Frankia alni ACN14a] Length = 338 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 3/209 (1%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 + L GGK +RP L L +A + + A A+E +H +LLHDD++D RR + Sbjct: 47 EPLPGGGGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDLMDGDTERRHR 106 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLS 151 A V+G ++L GD LL A +++E + A A ++ L G+ L Sbjct: 107 PTAWTVFGADGAILAGDALLGLATQVLLEVEGDAARRAALILGAGVQDLVRGQAEDLMFE 166 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 DVT D L + KT L + + + +++AG + + AL YG LG AFQL+DD+ Sbjct: 167 SRSDVTVADTLRMEDGKTGALLACSASLGAVLAGAGDEMVDALAEYGSRLGTAFQLIDDL 226 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L G+ GK + D R+ K ++PV++ Sbjct: 227 LGIWGDPAVTGKPVLSDLRSRKKSVPVVV 255 >gi|317471815|ref|ZP_07931152.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA] gi|316900706|gb|EFV22683.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA] Length = 297 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 28/228 (12%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV--VDDSALRRGKV 95 +GGKRLRPML T M + G V+ AIE IHT +L+HDD+ +D+ RRG+ Sbjct: 43 AGGKRLRPMLMEETYKM--FGGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQK 100 Query: 96 AARLVWGNQTSVLVGDFLLSQAF-----CMVIE----TKSQEALEALS-------LVACT 139 +V+G ++L GD LL+ AF +E K EA+ L+ ++ Sbjct: 101 TCHIVYGEDMAILAGDALLNYAFETASSAFALEDADLPKVAEAIRILARKPGIYGMIGGQ 160 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A+ EL LS E + + +KT+ L A + + +++AG +A++ G Sbjct: 161 AADVELEGTVLSM------EQIMFIHHNKTSALIEACMMIGAVLAGASPEDVKAMEECGR 214 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +G+AFQ+ DD+LD G+ +GK +G D +N K T I ++ K Sbjct: 215 KIGLAFQIQDDILDITGQEEVIGKPVGSDEKNQKTTYVSIKGLEQAGK 262 >gi|227538590|ref|ZP_03968639.1| possible trans-hexaprenyltranstransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227241509|gb|EEI91524.1| possible trans-hexaprenyltranstransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 201 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 88/151 (58%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S V ++ + Y++ GK++RPM +A + ++ A +E +HTA+L+HDDV Sbjct: 28 SSVPLLDRITHYIVKRKGKQMRPMFVFFSAGLCGSINESTFRGASLVELLHTASLVHDDV 87 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 VD++ RRG + +W N+ +VLVGDFLLS+ + ++ L+ +S ++EGE Sbjct: 88 VDNANERRGFFSVNALWKNKVAVLVGDFLLSKGLLLSVDNNDFHLLKIVSEAVEQMSEGE 147 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 L Q+ ++ LD+ E Y VI+ KTA L ++ Sbjct: 148 LLQIEKARKLDIEESVYFEVIRQKTASLIAS 178 >gi|114769861|ref|ZP_01447471.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium HTCC2255] gi|114549566|gb|EAU52448.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium HTCC2255] Length = 291 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 124/252 (49%), Gaps = 18/252 (7%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L++ +D+ P +++ + +GGKRLR L + + + E + D + A AIE +H + Sbjct: 22 MLQKQGNDLMSAP--IRHAVLNGGKRLRAFLVIHSCNIFEVQKDTAIQAAIAIECLHAYS 79 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +DD LRRGK + W T+ L GD L + AF ++ + +A+ + L+ Sbjct: 80 LVHDDLPCMDDDELRRGKPTVHVKWDEATATLTGDALQALAFELIASLPNTDAIRIVELL 139 Query: 137 ACTLAEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGV- 186 ++ + L + D+ E D + ++KT L +E S++ + Sbjct: 140 KKLAKASGMQGMVLGQAQDIQAEKSEVNLNINDITSLQQNKTGAL----IEWSAISGAIL 195 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N + L Y ++G+AFQ+ DD+LD G+ GK + +D GK T +L + Sbjct: 196 SNHDDRKLLDYAKSIGLAFQIQDDILDIEGDAVLAGKRLQKDVSAGKATFVSLLGIENAK 255 Query: 247 KREKNFWKSTIN 258 R K + I+ Sbjct: 256 LRAKELIEEAID 267 >gi|295099642|emb|CBK88731.1| Geranylgeranyl pyrophosphate synthase [Eubacterium cylindroides T2-87] Length = 282 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 76/265 (28%), Positives = 123/265 (46%), Gaps = 28/265 (10%) Query: 27 VEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 +E +P K Y + +GGKR+RP L A + ACAIE IHT +L+HD Sbjct: 16 LEKLPSRTKEAMCYSLMNGGKRVRPQLLFAALQHYGMDPKDGFACACAIEMIHTYSLIHD 75 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 D+ +D+ RRGK + + ++L GD LL++AF +V+ T + + LV Sbjct: 76 DLPAMDNDDFRRGKPSCHKAYDEACAILAGDGLLTKAFEVVLRTPCSDT-NKVKLVEALS 134 Query: 141 AEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + + + + LD+ E+ H + + KTA L + L +++IA + + Sbjct: 135 SYSGIDGMIYGQELDIQSENDPHATLDTLLKIDEYKTAKLLTLPLVCAAIIANKHEDI-E 193 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +K G +LG+ FQ+ DD+LD E+GK+ D N K T IL + + K Sbjct: 194 IMKKIGYDLGVQFQIQDDILDVTKTSEELGKS-ASDQENNKTTAVTILGLNKAKEMVKEL 252 Query: 253 WKSTINDGKISVENLKKAFIIMREN 277 E+LKK + + N Sbjct: 253 Q-----------EDLKKCLMSLNGN 266 >gi|294827621|ref|NP_710507.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans serovar Lai str. 56601] gi|293385465|gb|AAN47525.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans serovar Lai str. 56601] Length = 313 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 123/247 (49%), Gaps = 21/247 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + +GGKRLRP+L LA L+ N +LL ++E IHT +L+HDD+ +D+ Sbjct: 39 EAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGASLECIHTYSLIHDDLPSMDNDD 98 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--------LEAL-------S 134 RRG + T++L GD L S AF + + + LE L Sbjct: 99 FRRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVENGDHFLHRNLLEILHAGCGAPG 158 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVI----KSKTAVLFSAALEVSSLIAGVQNSV 190 +V+ + + ++ + ++ +N + D + ++ + KT L +AL + + + Sbjct: 159 MVSGQVYDLQMERENVKENDSTNQSDKIEMLQLTHRLKTGALIKSALLLGNRLRKDWKKR 218 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +L YG +LG+ FQ+ DD+LD G +GK G+D ++GK T P++ R K + Sbjct: 219 ETSLSQYGEDLGLLFQITDDILDVEGTQESLGKTPGKDQKSGKITYPMLFGMDRCKKMVE 278 Query: 251 NFWKSTI 257 K+ I Sbjct: 279 ELQKNLI 285 >gi|15642935|ref|NP_227976.1| geranyltranstransferase [Thermotoga maritima MSB8] gi|4980655|gb|AAD35254.1|AE001701_7 geranyltranstransferase [Thermotoga maritima MSB8] Length = 272 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/245 (27%), Positives = 122/245 (49%), Gaps = 10/245 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKR+RP+L L L + + +A A+E HTA+L+HDD+ +D++ RRGK + Sbjct: 33 GGKRIRPLLVLTLGEDLGVEEEKLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKPSCH 92 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS-KNLDVT 157 +G ++L GD L AF + + + + E S A L GE + + ++V+ Sbjct: 93 RTYGEDIALLAGDGLFFLAFSQISKIGNSKIFEEFSETAYKLLLGEAMDVEFERRKMEVS 152 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 +E + KT LF+ ++ G ++ +K G G+AFQ+ DD+ D G Sbjct: 153 QEMVERMYAFKTGALFAFCFSAPFILKGKDHT---KMKLLGEKFGVAFQIYDDLKDILGS 209 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 ++GK++G+D K TL + Q+ + +++ + I E L + +++E Sbjct: 210 FEKVGKDLGKD--TEKVTLVKKVGIQKAREMADKYYEEVLKG--IESEGLFRTLFLLKEL 265 Query: 278 RALVD 282 + +V+ Sbjct: 266 KQMVE 270 >gi|257899149|ref|ZP_05678802.1| polyprenyl synthetase [Enterococcus faecium Com15] gi|257837061|gb|EEV62135.1| polyprenyl synthetase [Enterococcus faecium Com15] Length = 296 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 114/224 (50%), Gaps = 13/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDS 88 D + Y + +GGKR+RP+L LA + D V +A A+E +HT +L+HDD+ +D+ Sbjct: 33 DAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMDND 92 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLVACTLAEGEL 145 LRRGK V+G ++L GD LL+ AF M S + L L C ++G + Sbjct: 93 DLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLLLQQLAVCAGSQGMV 152 Query: 146 RQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + SK L + E ++H + KT L AL ++A + L+ + Sbjct: 153 AGQAADIEGESKKLSLEELAFIH--ERKTGRLIRYALLAGGILAKQPEEILLLLQRLAEH 210 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+AFQ+ DD+LD G +GK G+D R K T P +L ++ Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEK 254 >gi|254805697|ref|YP_003083918.1| geranyltranstransferase [Neisseria meningitidis alpha14] gi|254669239|emb|CBA08097.1| geranyltranstransferase [Neisseria meningitidis alpha14] gi|325145254|gb|EGC67533.1| geranyltranstransferase [Neisseria meningitidis M01-240013] Length = 298 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 14/232 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + D AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGGVVADAVGQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + + T++LVGD L +QAF ++ A Sbjct: 80 IHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSC 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 200 PNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|113461047|ref|YP_719114.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT] gi|112823090|gb|ABI25179.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT] Length = 296 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 136/264 (51%), Gaps = 20/264 (7%) Query: 13 EKVNFLILKRI-CSDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-- 67 +++NF + K+ C D P + +KY + GGKR+RP L AT ML G N + L Sbjct: 13 QRINFFLEKQFECIDSSPSPLAEAMKYGLLLGGKRIRPFLVYATGKML---GANLIQLDY 69 Query: 68 -ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 A AIE IH +L+HDD+ +D+ +LRRG + + + T++L GD L AF ++ +T Sbjct: 70 AAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDALQPFAFELLTQT 129 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAAL 177 A + L+LV ++ + L ++LD+ E+ + ++KT L SAA+ Sbjct: 130 PDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIHRNKTGALLSAAV 189 Query: 178 EVSSLIAGVQNSVR--QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++ + + +++ + L Y +G+AFQ+ DD+LD GE +GK G D K T Sbjct: 190 KMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIEGESIVIGKTAGSDLLADKST 249 Query: 236 LPVILAFQRGTKREKNFWKSTIND 259 P ++ ++ + + + + Sbjct: 250 YPKLIGLDGAKQKARELYHQALQE 273 >gi|150016579|ref|YP_001308833.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052] gi|149903044|gb|ABR33877.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052] Length = 289 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 13/227 (5%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 +I D Y + GGKR+RP+L T + + + +A A+E IHT +L+HDD+ +D Sbjct: 27 IIYDSCSYSLNIGGKRIRPILLSLTYYIYKEDYRKVIPMAAAMEMIHTYSLIHDDLPCMD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACTL-AE 142 + LRRGK + + +VL GD LL++A ++++ AL A +A AE Sbjct: 87 NDDLRRGKPTNHIKFQENIAVLAGDALLNEAMIIMMDYALKSENNALRAAHEIAVAAGAE 146 Query: 143 GELRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G + +S K + E +Y+H KT L AA+ +++A + L+ Y Sbjct: 147 GMIGGQVVDIISEGKKISQDELEYMHA--KKTGALIRAAIVSGAILAEAPEDDLRLLREY 204 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G LG+ FQ+ DD+LD G+ N +GKNI D + K + + Sbjct: 205 GEKLGLVFQIKDDILDVIGDSNVLGKNIHADEEHNKTNFISVFGLDK 251 >gi|146292379|ref|YP_001182803.1| polyprenyl synthetase [Shewanella putrefaciens CN-32] gi|145564069|gb|ABP75004.1| farnesyl-diphosphate synthase [Shewanella putrefaciens CN-32] Length = 293 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 10/221 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y GGKR+RP L + M + A AIE IH +L+HDD+ +DD AL Sbjct: 34 AMQYGALLGGKRIRPFLVYSVGQMFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLAEGELRQLS 149 RRG+ + + T++L GD L + AF +V E S + E +++V R + Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVSGISSEQHIAMVRALAKASGYRGMC 153 Query: 150 LSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + +D+ D +K+ KT L S A+E++ + A Q + ++ +G Sbjct: 154 GGQAIDLASTDKQIDLKALTQLHNMKTGALISCAVELALIAANAPKDQYQTMMTFAHAVG 213 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +AFQ+ DD+LD E+GK G D + K T P +L Q Sbjct: 214 LAFQVQDDILDIIATTEELGKPQGSDTESNKSTFPQLLGLQ 254 >gi|139439484|ref|ZP_01772916.1| Hypothetical protein COLAER_01942 [Collinsella aerofaciens ATCC 25986] gi|133775037|gb|EBA38857.1| Hypothetical protein COLAER_01942 [Collinsella aerofaciens ATCC 25986] Length = 341 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 14/294 (4%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 + GKR RP++ + A + ++ A AIE + L+HDD+ D+ LRRGK L Sbjct: 51 NAGKRHRPLICMLAATAVGGSFESARSAAAAIEHFQSGALIHDDIADNGQLRRGKPCMHL 110 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEA------LEALSLVACTLAEGELRQLSLSKN 153 G ++ GD L+ V++ + E+ L L+ + EG+ L ++ Sbjct: 111 TEGTGLAINCGDLALTMVTKTVLDDPTLESDVKLRVLHELTEMIVRTIEGQALDLGWVRD 170 Query: 154 --LDVTEEDYLHVIKSKTAVLFSAA--LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 D++ +DYL + KTA +S A L ++I G + +AL+++G++ G+AFQ+ D Sbjct: 171 GRFDISVDDYLDMATHKTA-FYSGATPLAAGAIIGGGSDEQIEALRAFGLHTGLAFQIQD 229 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D+L+ G K+ D GK TL + A +R + ++ ++ G L + Sbjct: 230 DLLNLVGTKEAANKDFRTDITEGKRTLVAVHALS--DERHHDEVEAILSSGTDDPAQLAR 287 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322 A I +E ++ A KAK ++ + D ++ + + DF ++RLN Sbjct: 288 AVEIFQETDSIDYAHTYALDLTAKAKAAIENVELDPHARELFLSMADFFVERLN 341 >gi|91762255|ref|ZP_01264220.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002] gi|91718057|gb|EAS84707.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002] Length = 290 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 120/237 (50%), Gaps = 12/237 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y +F GGK++R + + + + + + A+E IH +L+HDD+ +DD +R Sbjct: 32 MEYGLFPGGKKIRSKILIDIGAIFKINYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIR 91 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTL--AE 142 RGK++ + +G T+VL G+ LL+ AF +++ + + + ++ LS + L A Sbjct: 92 RGKISTHIKFGESTAVLAGNSLLTMAFEILVSSSLKLNEKIKVDLIKKLSETSGHLGIAG 151 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+ LS K + IK KT LFS V +I N+ + ++ G N+G Sbjct: 152 GQYLDLSFEKKKVSKSKIIDMEIK-KTGKLFSFCCTVPVIIKRKSNTQIKFFENIGSNIG 210 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 + FQ+ DD++D++G GK G+D + GK TL +L +Q K I D Sbjct: 211 LLFQIADDLIDFKGSTVIAGKLTGKDKKKGKATLISLLGYQNAIKYADKIKSKIIKD 267 >gi|149197624|ref|ZP_01874674.1| geranylgeranyl pyrophosphate synthetase [Lentisphaera araneosa HTCC2155] gi|149139194|gb|EDM27597.1| geranylgeranyl pyrophosphate synthetase [Lentisphaera araneosa HTCC2155] Length = 360 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 91/318 (28%), Positives = 145/318 (45%), Gaps = 41/318 (12%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGKRLRP L L +A ++ + +A A E HT TL+HDD++D A RRG + Sbjct: 45 NGGKRLRPALCLWSAALVSDCPELATSVASAAEIFHTWTLVHDDIIDRDATRRGLPTSHT 104 Query: 100 V------------------WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--------- 132 +G ++L GD + A +V E +++ Sbjct: 105 ALADFARKEHGSEGDNADHFGLSMAILTGDLQQAWALRLVSEQANKDLTSGTALAVMDRL 164 Query: 133 LSLVACTLAEGELRQLSLS-KNLD-VTEEDYLHVIKSKTAVL--FSA------ALEVSSL 182 LS V L GE + + +D ++ E+ L +++ KTA L FSA LE+ S Sbjct: 165 LSHVYPVLLGGEAIDVEFEHREIDSISPEEILKMLEMKTACLLEFSAQAGVVVGLELDSF 224 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + + Q + N G+AFQL DD+L + E+GK +G D K TL ++ Sbjct: 225 DHDLVHHAGQ----FAYNAGLAFQLQDDILGVFADEKELGKPVGSDIAARKVTLLIVETI 280 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + +K F + +IS E L++A I++ AL + Y Q A++ L LP Sbjct: 281 KMTKADDKKFILDLLGSNQISSEQLQQAAEIIKTCGALSKIQAMMDQYVQAAEEHLAKLP 340 Query: 303 DSSWKKSLMEVVDFCLQR 320 +S K+ L E+ F ++R Sbjct: 341 NSPAKERLKELAHFMIKR 358 >gi|238754213|ref|ZP_04615570.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473] gi|238707460|gb|EEP99820.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473] Length = 305 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 24/267 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y GGKRLRP L AT M A A+E IH +L+HDD+ +D+ L Sbjct: 41 AMRYGTLLGGKRLRPYLVYATGQMFGVPLATLDAPAAAVECIHAYSLMHDDLPAMDNDDL 100 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-----QEALEALSLVACT-----L 140 RRG+ + +G ++L GD L + AF ++ + Q+ + LS +A + Sbjct: 101 RRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPDVTLQDRISMLSELATASGVAGM 160 Query: 141 AEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA-LKSYG 198 G+ L+ + + +TE + +H + KT L A+ +++L AG + L Y Sbjct: 161 CGGQALDLAAEERQISLTELEKIH--RHKTGALIRTAVRMAALTAGTAGHLAMPQLDRYA 218 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS--- 255 +G+AFQ+ DD+LD G+ ++GK G D + GK T P +L + + + ++ Sbjct: 219 NAIGLAFQVQDDILDVIGDTAKIGKRQGADQQLGKSTYPALLGLEAAQTKAWDLYQEALA 278 Query: 256 ---TINDGKISVENLK--KAFIIMREN 277 T+ + +L+ +FII R+N Sbjct: 279 ALDTLAEQSYDTTSLRALASFIIERDN 305 >gi|53722784|ref|YP_111769.1| geranyltranstransferase [Burkholderia pseudomallei K96243] gi|76817464|ref|YP_336001.1| geranyltranstransferase [Burkholderia pseudomallei 1710b] gi|126442384|ref|YP_001063528.1| geranyltranstransferase [Burkholderia pseudomallei 668] gi|126458477|ref|YP_001076425.1| geranyltranstransferase [Burkholderia pseudomallei 1106a] gi|134278219|ref|ZP_01764933.1| geranyltranstransferase [Burkholderia pseudomallei 305] gi|167724592|ref|ZP_02407828.1| geranyltranstransferase [Burkholderia pseudomallei DM98] gi|167743543|ref|ZP_02416317.1| geranyltranstransferase [Burkholderia pseudomallei 14] gi|167820731|ref|ZP_02452411.1| geranyltranstransferase [Burkholderia pseudomallei 91] gi|167829090|ref|ZP_02460561.1| geranyltranstransferase [Burkholderia pseudomallei 9] gi|167850567|ref|ZP_02476075.1| geranyltranstransferase [Burkholderia pseudomallei B7210] gi|167899160|ref|ZP_02486561.1| geranyltranstransferase [Burkholderia pseudomallei 7894] gi|167907503|ref|ZP_02494708.1| geranyltranstransferase [Burkholderia pseudomallei NCTC 13177] gi|167915842|ref|ZP_02502933.1| geranyltranstransferase [Burkholderia pseudomallei 112] gi|167923681|ref|ZP_02510772.1| geranyltranstransferase [Burkholderia pseudomallei BCC215] gi|217422667|ref|ZP_03454170.1| geranyltranstransferase [Burkholderia pseudomallei 576] gi|226195863|ref|ZP_03791450.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9] gi|237509552|ref|ZP_04522267.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346] gi|242312765|ref|ZP_04811782.1| geranyltranstransferase [Burkholderia pseudomallei 1106b] gi|254184923|ref|ZP_04891512.1| geranyltranstransferase [Burkholderia pseudomallei 1655] gi|254186152|ref|ZP_04892670.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237] gi|254194119|ref|ZP_04900551.1| geranyltranstransferase [Burkholderia pseudomallei S13] gi|254263700|ref|ZP_04954565.1| geranyltranstransferase [Burkholderia pseudomallei 1710a] gi|254301205|ref|ZP_04968649.1| geranyltranstransferase [Burkholderia pseudomallei 406e] gi|52213198|emb|CAH39238.1| geranyltranstransferase [Burkholderia pseudomallei K96243] gi|76581937|gb|ABA51411.1| geranyltranstransferase [Burkholderia pseudomallei 1710b] gi|126221875|gb|ABN85380.1| geranyltranstransferase [Burkholderia pseudomallei 668] gi|126232245|gb|ABN95658.1| geranyltranstransferase [Burkholderia pseudomallei 1106a] gi|134250003|gb|EBA50083.1| geranyltranstransferase [Burkholderia pseudomallei 305] gi|157811223|gb|EDO88393.1| geranyltranstransferase [Burkholderia pseudomallei 406e] gi|157933838|gb|EDO89508.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237] gi|169650870|gb|EDS83563.1| geranyltranstransferase [Burkholderia pseudomallei S13] gi|184215515|gb|EDU12496.1| geranyltranstransferase [Burkholderia pseudomallei 1655] gi|217394898|gb|EEC34917.1| geranyltranstransferase [Burkholderia pseudomallei 576] gi|225932348|gb|EEH28348.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9] gi|235001757|gb|EEP51181.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346] gi|242136004|gb|EES22407.1| geranyltranstransferase [Burkholderia pseudomallei 1106b] gi|254214702|gb|EET04087.1| geranyltranstransferase [Burkholderia pseudomallei 1710a] Length = 294 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 118/223 (52%), Gaps = 14/223 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + + A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-----QEALE---ALSLVACTLA 141 LRRGK + + T++LVGD L SQAF + + + Q AL AL+ + +A Sbjct: 94 LRRGKPTVHVKYDEPTALLVGDALQSQAFVALTDAAALPADRQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS--VRQALKSYGM 199 G+ L+ S + +T + + + KT L A++ + +L AG S +AL +Y Sbjct: 154 GGQAIDLA-SVGVALTRDALETMHRMKTGALLRASVRMGAL-AGETPSGDAMRALDAYAA 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D N KPT I+ Sbjct: 212 AVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGL 254 >gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44] gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44] Length = 313 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 13/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKRLRP+L A A + + CA+E IH +L+HDD+ +D+ Sbjct: 51 EAMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDT 110 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVACT---L 140 +RRGK + +G +++L GD L + AF ++ I Q L L A + Sbjct: 111 MRRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGM 170 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A G+ L S+ K L + +H +K+ A+L + L ++ A AL YG Sbjct: 171 AGGQAIDLASVGKQLSEAQLREMHRLKTG-ALLLGSVLMGAACNAQTDARALAALTDYGQ 229 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+AFQ+VDD+LD + +GK G+D N KPT +L + Sbjct: 230 ALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPTFVSLLGLE 273 >gi|226323204|ref|ZP_03798722.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758] gi|225208394|gb|EEG90748.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758] Length = 300 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 122/232 (52%), Gaps = 16/232 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKRLRPML T + G A+E IHT +L+HDD+ +D+ Sbjct: 36 IMEAMEYSVMAGGKRLRPMLMQETYRLFGGEGKEIEPFMAAMEMIHTYSLVHDDLPAMDN 95 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---ETKSQEAL---EALSLVA---- 137 RRG+ +V+G +L GD LL+ AF + E +++L +AL ++A Sbjct: 96 DEYRRGRKTTHIVYGEAMGILAGDALLNYAFETAVKAFEIAPEKSLLIGKALKILAEKAG 155 Query: 138 -CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + G++ + S LD ++++ +K T L +++ + +L+AG +++ + ++ Sbjct: 156 IYGMIGGQVVDVASCGVGLDEGMLNFIYELK--TGALIESSMMIGALLAGAEDAELEKVQ 213 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +GIAFQ+ DD+LD E+GK + D +N K T + ++ T+ Sbjct: 214 KIASGVGIAFQIQDDILDVTSTTEELGKPVHSDEKNEKTTYVTLKGLEKATR 265 >gi|257462419|ref|ZP_05626833.1| dimethylallyltransferase [Fusobacterium sp. D12] gi|317060083|ref|ZP_07924568.1| geranyltranstransferase [Fusobacterium sp. D12] gi|313685759|gb|EFS22594.1| geranyltranstransferase [Fusobacterium sp. D12] Length = 290 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/251 (27%), Positives = 129/251 (51%), Gaps = 19/251 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y GGKR+RP L + +L + A A+E IH+ +L+HDD+ +D+ Sbjct: 25 IAEGMQYACLQGGKRIRPQLLFMSLALLGKEIALGLPFALALEMIHSYSLVHDDLPAMDN 84 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVAC---- 138 RRG++ +G ++L+GD LL+ AF +++ + S++ LE ++L + Sbjct: 85 DEYRRGQLTTHKKFGEANAILIGDALLTNAFSVMVRGSMGKVSSEKILEIVALFSEYAGV 144 Query: 139 -TLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + G+ ++ K + ++H + KT L + V+ ++ R+AL+ Sbjct: 145 DGMIGGQAMDVAYEGKQISYKTLSFIH--EHKTGRLLLLPILVACILGDASLEQRKALEI 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 YG N+G+AFQ+ DD+LD G+ +MGK + D + K T P I G ++ K + Sbjct: 203 YGRNIGLAFQIKDDILDVEGDFTQMGKAVKSDEKLQKSTYPSIF----GLEKSKEMLTES 258 Query: 257 INDGKISVENL 267 + + + ++E + Sbjct: 259 LREARKALEEV 269 >gi|161870803|ref|YP_001599976.1| geranyltranstransferase [Neisseria meningitidis 053442] gi|161596356|gb|ABX74016.1| geranyltranstransferase [Neisseria meningitidis 053442] Length = 298 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 122/236 (51%), Gaps = 22/236 (9%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA---CA 70 L+L+R IP + ++Y GGKRLRPML LA + E G H + A Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAAS---ELGGVVHEAVEQAMAA 76 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 IE IH +L+HDD+ +D+ +LRRGK + + T++LVGD L +QAF ++ Sbjct: 77 IEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRPTELP 136 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVT---------EEDYLHVIKSKTAVLFSAALEV 179 A L++++ G ++ + +D+ + + +H +K+ A++ +A L Sbjct: 137 AARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTG-ALIRAAVLLG 195 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++ + ++ L +Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 196 ATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 251 >gi|126434936|ref|YP_001070627.1| polyprenyl synthetase [Mycobacterium sp. JLS] gi|126234736|gb|ABN98136.1| Polyprenyl synthetase [Mycobacterium sp. JLS] Length = 386 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 10/206 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK LRP L++A L L + D + A +E H A L+HDD+ D+S RRGK + Sbjct: 54 GGKALRPALSIAVCLGLGGQLDAILPTAATLELYHNAFLIHDDIEDESWWRRGKPTMHID 113 Query: 101 WGNQTSVLVGDFLLSQAFCMVIET-------KSQEALEALSLVACTLAEGELRQLSL--S 151 G +V VGD +LS + +++ + L A++ + EG+ +L S Sbjct: 114 HGIPIAVNVGDAMLSLSLQPLLDNVERIGLGPALRILRAVAHMTRRTVEGQAIELEWVRS 173 Query: 152 KNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + + DYL +++ KT+ F L+ ++ AGV + + L+S G +LG AFQ+ DD Sbjct: 174 NAWRLDDADYLTMVELKTSWYSFITPLQAGAIAAGVDPNRLEPLESLGRHLGAAFQITDD 233 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTL 236 +L+ R + E GK IG D GK TL Sbjct: 234 LLNLRADPEEYGKEIGGDLWEGKRTL 259 >gi|255524169|ref|ZP_05391129.1| Polyprenyl synthetase [Clostridium carboxidivorans P7] gi|296186627|ref|ZP_06855029.1| putative geranyltranstransferase [Clostridium carboxidivorans P7] gi|255512154|gb|EET88434.1| Polyprenyl synthetase [Clostridium carboxidivorans P7] gi|296048664|gb|EFG88096.1| putative geranyltranstransferase [Clostridium carboxidivorans P7] Length = 293 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 119/222 (53%), Gaps = 9/222 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + +GGKR+RP+L L T ++ + + + +A A+E IHT +L+HDD+ +D+ Sbjct: 34 EAMEYSLGAGGKRIRPLLLLLTYMLYKDDFEKVLPIASAVEMIHTYSLIHDDLPCMDNDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA---LEALSLVACTL-AEGEL 145 LRRGK V+G +VL GD LL++ +++++ E ++A S +A + AEG + Sbjct: 94 LRRGKPTNHKVFGEAVAVLAGDGLLNEGMSIMLKSCMNEQHNFIKACSFIAESAGAEGMV 153 Query: 146 RQLS---LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + LS+N + + ++ KT + A++ +++ + L+ YG LG Sbjct: 154 GGQTVDILSENTKIPIDQLYYMHSKKTGAIIKASIIAGAILGEAPKRDIENLEYYGQKLG 213 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +AFQ+ DD+LD G+ +GK D N K T + Sbjct: 214 LAFQIKDDILDIVGDTEVLGKKAKSDLDNNKTTFITTYGLNK 255 >gi|240851259|ref|YP_002972662.1| geranyltranstransferase [Bartonella grahamii as4aup] gi|240268382|gb|ACS51970.1| geranyltranstransferase [Bartonella grahamii as4aup] Length = 300 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 10/226 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + +GGKRLRP L + +A + + + + +ACA+E IH +L+HDD+ +D+ L Sbjct: 41 AMRYGVLNGGKRLRPFLVIQSAALFDIPVEYSLDVACALECIHCYSLIHDDLPAMDNDIL 100 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLAEGELRQLS 149 RRGK + + T++L G+ LL+ AF ++ S + + + L+ L + Sbjct: 101 RRGKPTVHIAFDEATAILAGNALLTFAFEIIAHKASTLSTDIRIKLITSLAQSAGLGGML 160 Query: 150 LSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + LD+ E D + + KTA L S A + ++I + + L +G LG Sbjct: 161 GGQMLDLEAEKKPQGSSDIITLQHMKTAALISFACQAGAIIGNASKELTEKLTDFGTYLG 220 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +AFQL DD+LD +GK G+D K T + + K+ Sbjct: 221 LAFQLTDDLLDVTANTQTLGKTAGKDETAQKATFVHLYGIEETQKK 266 >gi|254509029|ref|ZP_05121134.1| geranyltranstransferase [Vibrio parahaemolyticus 16] gi|219548064|gb|EED25084.1| geranyltranstransferase [Vibrio parahaemolyticus 16] Length = 294 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 114/239 (47%), Gaps = 12/239 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y + GGKR RP L T ML + A AIE IH +L+HDD+ +DD Sbjct: 32 DAMRYGLLLGGKRARPFLVYITGQMLGSSLEQLDTPAAAIECIHAYSLIHDDLPAMDDDE 91 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGE-LRQ 147 LRRG+ + + T++L GD L + AF ++ E + S EA ++ LAE Sbjct: 92 LRRGQPTCHIKFDEATAILTGDALQTLAFTILAEGQLSPEAEAQRIMMVKVLAEASGAAG 151 Query: 148 LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + + LD+ E+ + + ++KT L A+ + +L AG + V L Y Sbjct: 152 MCMGQALDLAAENRIVSLQELEEIHRNKTGALMKCAIRMGALAAGEKGIEVLPLLDKYAD 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L + + K + Sbjct: 212 AIGLAFQVQDDILDVISDTETLGKPQGSDQELNKSTYPALLGLEGAINKAHTLLKEALQ 270 >gi|170717621|ref|YP_001784702.1| polyprenyl synthetase [Haemophilus somnus 2336] gi|168825750|gb|ACA31121.1| Polyprenyl synthetase [Haemophilus somnus 2336] Length = 296 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 136/264 (51%), Gaps = 20/264 (7%) Query: 13 EKVNFLILKRI-CSDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-- 67 +++NF + K+ C D P + +KY + GGKR+RP L AT ML G N + L Sbjct: 13 QRINFFLEKQFECIDSSPSPLAEAMKYGLLLGGKRIRPFLVYATGKML---GANLIQLDY 69 Query: 68 -ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 A AIE IH +L+HDD+ +D+ +LRRG + + + T++L GD L AF ++ +T Sbjct: 70 AAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDALQPFAFELLTQT 129 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAAL 177 A + L+LV ++ + L ++LD+ E+ + ++KT L SAA+ Sbjct: 130 PDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIHRNKTGALLSAAV 189 Query: 178 EVSSLIAGVQNSVR--QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++ + + +++ + L Y +G+AFQ+ DD+LD GE +GK G D K T Sbjct: 190 KMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIEGESIVIGKTAGSDLLADKST 249 Query: 236 LPVILAFQRGTKREKNFWKSTIND 259 P ++ ++ + + + + Sbjct: 250 YPKLIGLDGAKQKAQELYHQALQE 273 >gi|158426076|ref|YP_001527368.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571] gi|158332965|dbj|BAF90450.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571] Length = 311 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 120/229 (52%), Gaps = 17/229 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +++ GGKRLRP+L + +A + + A A+E +H +L+HDD+ +D+ L Sbjct: 45 AMRHGSLDGGKRLRPLLVVESAALFGVPLARAITAAAALECVHCYSLIHDDLPAMDNDLL 104 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLV--------ACTLA 141 RRG+ + +G +T++L GD LL+ AF ++ E +A ++LV + Sbjct: 105 RRGRPTVHVAFGEETAILAGDGLLTLAFDLLAGEDAHPDAQVRIALVRLLARASGIGGMV 164 Query: 142 EGELRQLSLSKNLD------VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G++ L+ ++E D + KT L A +E+ +L+ G R AL Sbjct: 165 GGQMLDLAAEGRFSGGTPQALSEADIRTLQAMKTGALLRAGVEMGALLGGADAEARAALA 224 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +YG LG+AFQ+ DD+LD G+ +GK++G+D + GK TL L +R Sbjct: 225 AYGTALGVAFQIADDILDIEGDAAALGKSVGKDAQAGKATLVSALGMER 273 >gi|170288584|ref|YP_001738822.1| polyprenyl synthetase [Thermotoga sp. RQ2] gi|61657510|emb|CAI44421.1| geranyltranstransferase [Thermotoga sp. RQ2] gi|170176087|gb|ACB09139.1| Polyprenyl synthetase [Thermotoga sp. RQ2] Length = 272 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 122/245 (49%), Gaps = 10/245 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKR+RP+L L L + + +A A+E HTA+L+HDD+ +D++ RRGK + Sbjct: 33 GGKRIRPLLVLTLGEDLGVEEEKLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKPSCH 92 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS-KNLDVT 157 +G ++L GD L AF + + + + E S A L GE + + ++++ Sbjct: 93 RTYGEDIALLAGDGLFFLAFSQISKIGNSKIFEEFSETAYKLLLGEAMDVEFERRKMEIS 152 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 +E + KT LF+ ++ G ++ +K G G+AFQ+ DD+ D G Sbjct: 153 QEMVERMYAFKTGALFAFCFSAPFILKGKDHT---KMKLLGEKFGVAFQIYDDLKDILGS 209 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 ++GK++G+D K TL + Q+ + +++ + I E L + +++E Sbjct: 210 FEKVGKDLGKD--TEKVTLVKKVGIQKAREMADKYYEEVLKG--IESEGLFRTLFLLKEL 265 Query: 278 RALVD 282 + +V+ Sbjct: 266 KQMVE 270 >gi|323454000|gb|EGB09871.1| hypothetical protein AURANDRAFT_36976 [Aureococcus anophagefferens] Length = 439 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 88/293 (30%), Positives = 153/293 (52%), Gaps = 19/293 (6%) Query: 42 GKRLRPMLT--LATALMLEYRGDN-------HVLLACAIEFIHTATLLHDDVVDDSALRR 92 GKR RP + +A AL + + D+ L E IH A+L+HDDV+DD+ RR Sbjct: 150 GKRFRPTIVALMAKALPVVHARDDAETCKAKQDRLGQITEMIHVASLIHDDVLDDADTRR 209 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL--AEGELRQLSL 150 G A ++ N+ +VL GD+LL++A ++ + ++ +E ++ +L +G+ ++ + Sbjct: 210 GGDAIHKMYSNKVAVLSGDYLLARASVLLARLQHKQVVEVMAKALDSLLGKDGKQKKSEI 269 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSYGMNLGIAFQLV 208 + E YL KTA L A + +L+AG ++ +A + YG +LG+AFQ+V Sbjct: 270 AARDAKEMELYLRKSYYKTASLICDASKSCALLAGHDFDSATARAAEEYGYHLGLAFQIV 329 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DDVLD+ + +++GK G D G T P++ A Q + + DG ++ Sbjct: 330 DDVLDFVVDSDDLGKPAGADLSLGLATAPILYAAQDLPELRPLIDRRFKGDGDVT----- 384 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320 +A+ +R +R L + A+ + Q+A D++ R PDS + +L+ V L R Sbjct: 385 RAYETVRASRGLELSRKLAHFHAQRAVDAICRVAPDSEARDALISVCYIVLSR 437 >gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC 51196] gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC 51196] Length = 300 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 28/246 (11%) Query: 20 LKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-----LACA 70 L+R+ + +P +++ F+GGKRLRP+L + A L R D + L A Sbjct: 22 LERLLPAPDAVPSSIHRAIRHSTFAGGKRLRPVLAMEAARTL--RRDRALPAGVEDLGAA 79 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--S 126 IE +HT +L+HDD+ +D+ LRRGK +V+G ++L GD L + A+ + + + + Sbjct: 80 IEMLHTYSLIHDDLPALDNDDLRRGKPTCHVVFGEAIAILAGDALQTLAYQTLAQLRCPA 139 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAAL 177 +E + L+A A G + + + LD+ E D +H ++KT L ++ Sbjct: 140 PATVEIIRLIAE--ATGTVEGMIGGQVLDLEGEGTRPTAESVDAIH--RAKTGALIRVSI 195 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + AG + L +G G+AFQ+VDDVLD + +GK G+D K T P Sbjct: 196 VTGGVYAGATPEDVERLTIFGRKAGLAFQIVDDVLDMTQDSAHLGKTAGKDLATDKATWP 255 Query: 238 VILAFQ 243 + + Sbjct: 256 AVFGIE 261 >gi|291616530|ref|YP_003519272.1| IspA [Pantoea ananatis LMG 20103] gi|291151560|gb|ADD76144.1| IspA [Pantoea ananatis LMG 20103] Length = 299 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 123/243 (50%), Gaps = 20/243 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L AT ML + A A+E IH +L+HDD+ +DD A Sbjct: 34 NAMQYGALLGGKRLRPFLVYATGEMLHADKASLDAPAAAVECIHAYSLIHDDLPAMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVA-----CT 139 LRRG+ + +G T++L GD L + AF ++ + ++ L LS +A Sbjct: 94 LRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQPMPGVSAEYRLAMLSELAKASGVAG 153 Query: 140 LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK--- 195 + G+ L+ +++ + + + +H + KT L AA+ + + AG + R+AL Sbjct: 154 MCGGQALDLAAEGQSVGLAQLEQIH--RHKTGALIRAAVRLGAFAAGEKG--REALPYLD 209 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y +G+AFQ+ DD+LD G+ +GK G D GK T P ++ + + ++ Sbjct: 210 RYADAIGLAFQVQDDILDVTGDTAVIGKRQGADQDLGKSTYPSLMGLDDARTKALDLYQE 269 Query: 256 TIN 258 ++ Sbjct: 270 AVD 272 >gi|251782890|ref|YP_002997193.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391520|dbj|BAH81979.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 290 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 17/229 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + D + Y + SGGKR+RP++ L M+E G + H LA A+E IHT +L+HDD Sbjct: 24 EELIDAILYSVDSGGKRIRPLILLE---MIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ RRG++ +G T++L GD L F ++ + + ++ + +LA Sbjct: 81 LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLA 140 Query: 142 EGELRQLSLSKNLDVTEEDY------LHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G + + LD+ E+ L +I +KT L + + ++LI +VRQ L Sbjct: 141 SGTFGMVG-GQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPFKAAALITEQAMTVRQQL 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + GM +G AFQ+ DD+LD ++GK +D K T P +L + Sbjct: 200 EQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKATYPSLLGLE 248 >gi|15675402|ref|NP_269576.1| putative geranyltranstransferase [Streptococcus pyogenes M1 GAS] gi|71911044|ref|YP_282594.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus pyogenes MGAS5005] gi|13622588|gb|AAK34297.1| putative geranyltranstransferase (farnesyl diphosphate synthase) [Streptococcus pyogenes M1 GAS] gi|71853826|gb|AAZ51849.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus pyogenes MGAS5005] gi|323127694|gb|ADX24991.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 290 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 17/229 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + D + Y + SGGKR+RP++ L M+E G + H LA A+E IHT +L+HDD Sbjct: 24 EELIDAILYSVDSGGKRIRPLILLE---MIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ RRG++ +G T++L GD L F ++ + + ++ + +LA Sbjct: 81 LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLA 140 Query: 142 EGELRQLSLSKNLDVTEEDY------LHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G + + LD+ E+ L +I +KT L + + ++LI +VRQ L Sbjct: 141 SGTFGMVG-GQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPFKAAALITEQAMTVRQQL 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + GM +G AFQ+ DD+LD ++GK +D K T P +L + Sbjct: 200 EQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKATYPSLLGLE 248 >gi|329939715|ref|ZP_08289016.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus M045] gi|329301285|gb|EGG45180.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus M045] Length = 384 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 83/285 (29%), Positives = 132/285 (46%), Gaps = 8/285 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L L A L V A A+E +H TLLHDDV+D RR + A V+ Sbjct: 100 GKAIRPALVLTAAATLGGHRQAAVRAAAAVELVHNFTLLHDDVMDRDTTRRHRPTAWTVF 159 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLSLS--KNLDV 156 G+ ++L GD L + A ++ E + A + +A + E G+ +L + DV Sbjct: 160 GDSDAILAGDALQALAHRLLAEDPHPASAAAAARLASCVVELCAGQHADTALEERRPEDV 219 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T E+ L + ++KT L A + +L AG + +AL ++G G+AFQL+DDV+ G Sbjct: 220 TLEEVLAMAEAKTGALLGCACAMGALYAGAPHGEVEALDAFGRQAGLAFQLIDDVIGIWG 279 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + GK G D K +LPV+ A GT + +L++ + + Sbjct: 280 DPGRTGKPAGADLIARKKSLPVVAALASGTPAAAELAELYAA--PFQEGDLERTVLAVER 337 Query: 277 NRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320 + +A +A D L R +PD L+ + +F +R Sbjct: 338 AGGRDWAQAQAADRMARAVDELSRAVPDPESAGGLLALAEFVTRR 382 >gi|260893255|ref|YP_003239352.1| Polyprenyl synthetase [Ammonifex degensii KC4] gi|260865396|gb|ACX52502.1| Polyprenyl synthetase [Ammonifex degensii KC4] Length = 286 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 102/197 (51%), Gaps = 21/197 (10%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKRLRP L L A + ++ +L AC IE IH +L+HDD+ +D+ Sbjct: 36 MRYSVLGGGKRLRPALLLGAAEAVGADVAEDLLLAACGIELIHCYSLVHDDLPAMDNDDF 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKSQEALEALSLVACT----- 139 RRG+ + V+G ++L GD LL+ F +V S+ L + VA Sbjct: 96 RRGRPTSHRVFGEAIAILTGDALLTLGFELLARAALVARQGSEVGLRVIVEVARAAGSEG 155 Query: 140 LAEGELRQLSLSKNLD---VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + G++ L SKN D + EE + + KT LF AA+ +L+ G Q Q L Sbjct: 156 MVGGQVLDLGGSKNADPALLLEE----IHRKKTGALFVAAVRAGALLGGAQEEALQKLTL 211 Query: 197 YGMNLGIAFQLVDDVLD 213 Y LG+AFQ+VDD+LD Sbjct: 212 YAEELGLAFQIVDDILD 228 >gi|320008620|gb|ADW03470.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331] Length = 349 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 119/265 (44%), Gaps = 20/265 (7%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPD----VVKY-----------LIFSGGKRLRP 47 M ED + +E+ + ++ + VE +P V KY GK +RP Sbjct: 10 MEEDKAVALLERTRDAVDPQLRAAVETLPGAIRRVAKYHFGWQDADGTPAAGRAGKAIRP 69 Query: 48 MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107 L LA A + D + A A+E H TLLHDDV+D+ RR + A V+G +V Sbjct: 70 ALVLAAARAVGGDPDAAMRAAVAVELAHNFTLLHDDVIDEDTTRRHRPTAWAVFGVPDAV 129 Query: 108 LVGDFLLSQAFCMVIE---TKSQEALEALSLVACTLAEGELRQLSLSKNL--DVTEEDYL 162 + GD + S A ++ + S A LS L G+ L DVT ++ L Sbjct: 130 ITGDAMFSLALRLLTDDPHPASPHAAGRLSTCVIELCAGQQADCGLEDRGPDDVTLDECL 189 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L A + +L G +A+ +G G+AFQL+DD++ G+ G Sbjct: 190 AMAMAKTGALLGCACALGALYGGADERAVRAMDGFGREAGLAFQLIDDLIGIWGDTARTG 249 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTK 247 K +G D K +LPV+ A GT Sbjct: 250 KPVGADLTAHKKSLPVVAALTSGTP 274 >gi|327392961|dbj|BAK10383.1| geranyltranstransferase IspA [Pantoea ananatis AJ13355] Length = 299 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 123/243 (50%), Gaps = 20/243 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L AT ML + A A+E IH +L+HDD+ +DD A Sbjct: 34 NAMQYGALLGGKRLRPFLVYATGEMLHADKASLDAPAAAVECIHAYSLIHDDLPAMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVA-----CT 139 LRRG+ + +G T++L GD L + AF ++ + ++ L LS +A Sbjct: 94 LRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQPMPGVSAEYRLAMLSELAKASGVAG 153 Query: 140 LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK--- 195 + G+ L+ +++ + + + +H + KT L AA+ + + AG + R+AL Sbjct: 154 MCGGQALDLAAEGQSVGLAQLEQIH--RHKTGALIRAAVRLGAFAAGEKG--REALPYLD 209 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y +G+AFQ+ DD+LD G+ +GK G D GK T P ++ + + ++ Sbjct: 210 RYADAIGLAFQVQDDILDVTGDTAVIGKRQGADQDLGKSTYPSLMGLDDARTKALDLYQE 269 Query: 256 TIN 258 ++ Sbjct: 270 AVD 272 >gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group] gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica Group] gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica Group] gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group] gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group] gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group] Length = 366 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 73/251 (29%), Positives = 130/251 (51%), Gaps = 27/251 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP L LA ++ R + A A+E +HT +L+HDD+ Sbjct: 96 EAMRYALLAGGKRVRPALCLAACAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDD 155 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---------IETKSQEA--LEALS-LVA 137 LRRGK +V+G +VL GD LLS +F + I+ A + A+ L Sbjct: 156 LRRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELAR 215 Query: 138 CTLAEG-------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 C +EG +L ++ + + +Y+H+ KTA L A++ + +++ G + Sbjct: 216 CIGSEGLVAGQVVDLEMTGSTETVPLERLEYIHL--HKTAALLEASVVIGAILGGGSDEQ 273 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++L+ Y ++G+ FQ+VDD+LD E+GK G+D + K T P +L G ++ + Sbjct: 274 IESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLL----GLEKSR 329 Query: 251 NFWKSTINDGK 261 F + ++D + Sbjct: 330 EFAEKLLSDAR 340 >gi|317152625|ref|YP_004120673.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316942876|gb|ADU61927.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 297 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 81/270 (30%), Positives = 139/270 (51%), Gaps = 19/270 (7%) Query: 30 IPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 IPD ++Y + +GGKRLRP+LTLA A ML + + A ++E IHT +L+HDD+ Sbjct: 27 IPDSLLQAMEYSLLAGGKRLRPVLTLAWATMLGGDAERVMPFAASLECIHTYSLIHDDLP 86 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET------KSQEALEALSLVA 137 LRRG+ + + T++L GD LL+++F ++ E ++ L A+S++A Sbjct: 87 AMDDDDLRRGRPSNHKRYDEATAILAGDGLLTESFVLMTEASLIRGLPAERVLRAVSVLA 146 Query: 138 CT-----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + G+ + + +V ++ + KT L +AA E +++AG + Sbjct: 147 VAAGSGGMVGGQAVDMEFTGRAEVALDELRAMHAMKTGALITAACECGAVLAGASERDVE 206 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 + YG +G+AFQ+VDDVLD G+ +GK G D GK T P ++ R + + + Sbjct: 207 NAREYGRAVGVAFQIVDDVLDVVGDTGTLGKPAGSDEAMGKSTYPALVGLDRSRELAEGY 266 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVD 282 K + ++S N + + +R +VD Sbjct: 267 AKEALE--RLSSYNGSEKLFLADLSRYIVD 294 >gi|19746452|ref|NP_607588.1| geranyltranstransferase [Streptococcus pyogenes MGAS8232] gi|306827052|ref|ZP_07460350.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782] gi|19748654|gb|AAL98087.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS8232] gi|304430798|gb|EFM33809.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782] Length = 290 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 31/236 (13%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + D + Y + SGGKR+RP++ L M+E G + H LA A+E IHT +L+HDD Sbjct: 24 EELIDAILYSVDSGGKRIRPLILLE---MIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLV 136 + +D+ RRG++ +G T++L GD L F ++ + + ++ LSL Sbjct: 81 LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLA 140 Query: 137 ACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + T +GE + LSLS + +H+ +KT L + + ++L+ Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLS------QLSLIHL--NKTGKLLTFPFKAAALVTEQA 192 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +VRQ L+ GM +G AFQ+ DD+LD ++GK +D K T P +L + Sbjct: 193 ITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKATYPSLLGLE 248 >gi|146082077|ref|XP_001464441.1| farnesyl synthetase [Leishmania infantum JPCM5] gi|134068533|emb|CAM66828.1| putative solanesyl-diphosphate synthase [Leishmania infantum JPCM5] gi|322497846|emb|CBZ32922.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 359 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 85/317 (26%), Positives = 150/317 (47%), Gaps = 35/317 (11%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-----------LMLEYRGD----------NHVL 66 E++ KY++ +GGK +RP L + A L+ E G + Sbjct: 52 EVLDHAGKYVLAAGGKLMRPALVVLMAHAMLPLDVSARLLEEPIGSLDEVTPGTILPFLR 111 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IHTA+L+HDDV+D + RRG+ A V+ + +VL GD++L++A + + Sbjct: 112 LAEVTELIHTASLVHDDVIDSTGTRRGRPALHKVYDAKRAVLAGDYMLARASFYIATLQV 171 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + ++ L GEL Q+ ++ E+ KTA L + +L ++++A Sbjct: 172 PRIVILMTTALEELTAGELIQMDGCFDIPRYEQKSF----CKTASLIANSLASTAVLADP 227 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 N ++ Q +G +LGIAFQ++DD LD G+ +GK D + G T+PV+L +R Sbjct: 228 GNEALEQTAFDFGKHLGIAFQILDDCLDITGDEKMLGKPKLVDMKEGIATIPVLLVARRN 287 Query: 246 TKREKNFWK--STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 K + + + D + +E ++K A+ + +RA + + +SL L Sbjct: 288 AKVGEMVCRRFAEPGDAEFCLEAVEK-------EGAVAEAMHRADEHCRLGLESLHKLHH 340 Query: 304 SSWKKSLMEVVDFCLQR 320 S + +L + + R Sbjct: 341 SPARDALESALSMVMNR 357 >gi|309805530|ref|ZP_07699575.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c] gi|308165181|gb|EFO67419.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c] Length = 288 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/244 (28%), Positives = 128/244 (52%), Gaps = 12/244 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDS 88 +++ Y + +GGKRLRP+L LAT +L + + + +AC IE IHT +L+HDD+ +D+ Sbjct: 33 EIMSYSVLAGGKRLRPLLFLATLEILSHPISEKEIKIACGIELIHTYSLIHDDLPAMDND 92 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALS--LVACTLAEGEL 145 RRGK+ + WG ++L GD LL + E + S E ++ ++ + +A G+ Sbjct: 93 DYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSYELIKVITRAIGPNGMAGGQY 152 Query: 146 RQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + NL E ++ ++ KT L A++++++ A + V+ L + G Sbjct: 153 MDIDSTNNLSYKRNETFIDKMEFLKTGCLIVASVQMAAKYANSSDKVQMNLLHFAEAFGR 212 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 A+Q+ DD++D + GK +D NGK +L G K+ + I GK++ Sbjct: 213 AYQIYDDIVDIMQTSVQAGKKTHKDADNGKNNTLTML----GLKKSQAELSDLIARGKVA 268 Query: 264 VENL 267 ++++ Sbjct: 269 IKDI 272 >gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776] gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776] Length = 318 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 114/238 (47%), Gaps = 11/238 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP+L L + + A A+E IH +L+HDD+ Sbjct: 59 ESMRYSALGGGKRLRPVLVLLASEACGADPLQAMPAAVALEMIHCYSLIHDDLPAMDDDD 118 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA--------CTLA 141 LRRG+ +V+G T++L GD LL++AF ++ S + L AL+ VA C + Sbjct: 119 LRRGRPTNHIVYGEATAILAGDGLLTRAFEVLATEISNKEL-ALACVADLASAAGWCGMV 177 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G+ L+ T + + KT L + AL + + G ++L YG + Sbjct: 178 GGQAADLAAETTPVTTLAELEQIHHRKTGRLLACALTMGGRLGGASVQQLESLARYGFAI 237 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 G+AFQ+ DD+LD G ++GK +D + GK T P L + +R + K + Sbjct: 238 GLAFQIADDLLDVEGSSEKLGKQTQKDAQAGKATYPGFLGVEASRERAADLVKQACRE 295 >gi|71062428|gb|AAZ21431.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062] Length = 259 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 120/237 (50%), Gaps = 12/237 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y +F GGK++R + + + + + + A+E IH +L+HDD+ +DD +R Sbjct: 1 MEYGLFPGGKKIRSKILIDIGAIFKINYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIR 60 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTL--AE 142 RGK++ + +G T+VL G+ LL+ AF +++ + + + ++ LS + L A Sbjct: 61 RGKISTHIKFGESTAVLAGNSLLTMAFEILVSSSLKINEKIKVDLVKKLSETSGHLGIAG 120 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+ LS K + IK KT LFS V +I N+ + ++ G N+G Sbjct: 121 GQYLDLSFEKKKVSKSKIIDMEIK-KTGKLFSFCCAVPVIIKRKSNTQIKFFENIGSNIG 179 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 + FQ+ DD++D++G GK G+D + GK TL +L +Q K I D Sbjct: 180 LLFQIADDLIDFKGSTVIAGKLTGKDKKKGKATLISLLGYQNAIKYADKIKSKIIKD 236 >gi|296447264|ref|ZP_06889193.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b] gi|296255226|gb|EFH02324.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b] Length = 306 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 14/239 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y+ GGKRLRP L L +A + G++ A AIE IH +L HDD+ Sbjct: 42 EAMRYVALGGGKRLRPFLALESARLFGVCGESAARAAAAIEMIHCYSLAHDDLPAMDDDD 101 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE--TKSQEALEALSLVACTLAEGELRQ 147 LRRG+ A + T++L GD LL+ AF ++ + T + + A ++A A G L Sbjct: 102 LRRGRPTAHKAFDEATAILAGDGLLTYAFDVLADPATHADPLIRARLVLALARAAG-LGG 160 Query: 148 LSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + LD+ T+E+ L + KT L ++ +++ G V AL YG Sbjct: 161 MVGGQALDLEAEKAAAPLTQEETLRLQAMKTGALLRVCVDFGAILGGASAEVAAALGRYG 220 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 LG AFQ+ DD+LD G+ +GK G+D K TL +L ++ R ++ + Sbjct: 221 DALGAAFQIADDILDAEGDEAALGKRAGKDAERNKATLIGLLGLEKARARRDALVETAV 279 >gi|237756447|ref|ZP_04584985.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691395|gb|EEP60465.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5] Length = 287 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 137/265 (51%), Gaps = 14/265 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 E + + ++Y + +GGKR+RP+L + A A+ + ++ + +A + EFIHT +L+HDD+ Sbjct: 28 EELSNAMRYSLEAGGKRIRPILVIESAKAVKEDVNVEDFIDIAISTEFIHTYSLIHDDLP 87 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 LRRGK V+G ++L GD LL+ AF ++ K A + + ++ Sbjct: 88 AMDDDDLRRGKPTCHKVFGEAIAILAGDGLLTYAFEVISNNKKLSAEKIVKVINILSHNV 147 Query: 144 ELRQLSLSKNLDV----TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + + D+ + +++H+ +KTA SA ++ ++A LK+YG+ Sbjct: 148 GIYGMVGGQAADILPNFKDVEFIHL--NKTAKFLSACCQIGGVLADATEEEILKLKNYGI 205 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 N+G+AFQ+ DD+LD G+ + GK + +D K T P + ++ + K + Sbjct: 206 NIGLAFQIWDDILDEIGDEEKAGKRLHKDKDKNKITYPSLYGLEKSIQ----IAKDCVEK 261 Query: 260 GKISVENLKKAFIIMRENRALVDTE 284 K + +LKK +++ + ++ E Sbjct: 262 AKNEIRDLKKPEFLIKLAKYIISRE 286 >gi|21232031|ref|NP_637948.1| farnesyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767842|ref|YP_242604.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|21113769|gb|AAM41872.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573174|gb|AAY48584.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. 8004] Length = 291 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 8/218 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +++ + GGKR+RP+L A+ + + A A+E IH +L+HDD+ +DD AL Sbjct: 34 AMRHAVLGGGKRMRPLLVYASGALFGAEEGSLDAPAVAVELIHAYSLVHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGEL 145 RRG + + T++L GD L ++AF ++ E + AL ++L+ A Sbjct: 94 RRGHPTVHIAFDEATAILAGDALQARAFELLAEAPADAALRVGWLQSLASAAGAAGMCGG 153 Query: 146 RQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L + V + L + + KT L AA+ + L G + +Q L ++ LG+A Sbjct: 154 QALDIDATGQVQALEALQRMHALKTGALIRAAVRMGVLTGGAGIADQQRLDAFADALGLA 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 FQ+ DD+LD ++GK G+D K T P +L Sbjct: 214 FQVRDDILDVESSSAQLGKTAGKDAAQSKSTYPALLGM 251 >gi|326803324|ref|YP_004321142.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a] gi|326650194|gb|AEA00377.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a] Length = 299 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 119/222 (53%), Gaps = 18/222 (8%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA--CAIEFIHTATLLHDDV--VDDSA 89 ++Y + +GGKRLRP L LAT Y D H+ LA CA+E+IHT +L+HDD+ +D+ Sbjct: 34 MRYSLENGGKRLRPSLLLATLASFNY--DYHLGLAPACAVEYIHTYSLIHDDLPAMDNDD 91 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETKSQEALEALSLVA-----CTL 140 RRG++ + T++L GD LL+ AF ++ ET Q LE + L+A + Sbjct: 92 YRRGQLTNHKKFDEATAILAGDALLTLAFEVLSQSQEETDPQLKLELVQLLAQAAGKSGM 151 Query: 141 AEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 +G++ +S K+L + E LH KT L A+ ++LI + + + +L SY Sbjct: 152 VDGQVLDMSSEEKHLTIEELKNLH--GKKTGALIHFAIMAAALIMDLDQAAQDSLASYAH 209 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + GIA+Q+ +D+ + E GK D + K T P +L Sbjct: 210 HFGIAYQIQNDLQEVMWNDEERGKKSHGDQDSDKNTYPSLLG 251 >gi|296283988|ref|ZP_06861986.1| geranyltranstransferase [Citromicrobium bathyomarinum JL354] Length = 308 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 120/229 (52%), Gaps = 10/229 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + +++ GGKR+RP+L +ATA ML + VL A+E IH +L+HDD+ Sbjct: 48 EAMRHAAIGGGKRVRPLLLVATATMLGVSREAAVLAGTAVESIHVYSLIHDDLPCMDDDD 107 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGELRQL 148 +RRGK + T+VL GD L + AF ++ ++ S + LV C + + Sbjct: 108 MRRGKPTVHKAFDEATAVLAGDALHALAFDILTDSSVSSDPFIQAELVRCLAQASGMSGM 167 Query: 149 SLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + +D+ + + + + KT L +A++E+ +++A V + R L +Y ++ Sbjct: 168 AGGQAMDMAADSATYDLPTITRLQQLKTGALLTASVEMGAILARVPHDARGHLIAYARDI 227 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 G+AFQ+ DD+LD+ G+ ++ GK + +D GK T ++ + + K Sbjct: 228 GLAFQIADDLLDHEGDEDKAGKALRKDDEQGKQTFVTLMGAEGARAQAK 276 >gi|253995978|ref|YP_003048042.1| polyprenyl synthetase [Methylotenera mobilis JLW8] gi|253982657|gb|ACT47515.1| Polyprenyl synthetase [Methylotenera mobilis JLW8] Length = 303 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 20/245 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 +++ D ++Y + GGKR+R +L A A + ACA+E IH +L+HDD+ + Sbjct: 41 QVLHDAMRYSLLGGGKRVRALLCYAAAELCATNATIADAAACAVEMIHAYSLVHDDMPCM 100 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLV-------- 136 D+ LRRGK + + + T++LVGD L S AF + T + A + +S++ Sbjct: 101 DNDDLRRGKPSCHKQYDDATALLVGDALQSLAFDVLSTPTLCESANQQISMLNILAKASG 160 Query: 137 ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--A 193 + +A G+ L S+ K L E + +H K KT L AA +L+ + Q A Sbjct: 161 SLGMAGGQAIDLASVGKALSQHELENMH--KLKTGALIQAA----ALLGASSGTAEQMSA 214 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 + Y ++G+AFQ+VDD+LD + + +GK G+D + KPT IL + K + Sbjct: 215 VIVYAEHIGLAFQVVDDILDVEADTSTLGKTAGKDADSNKPTYVTILGLDQAKKLADQLY 274 Query: 254 KSTIN 258 ++ I+ Sbjct: 275 ETAIS 279 >gi|183983209|ref|YP_001851500.1| polyprenyl synthetase IdsB_1 [Mycobacterium marinum M] gi|183176535|gb|ACC41645.1| polyprenyl synthetase IdsB_1 [Mycobacterium marinum M] Length = 345 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 123/257 (47%), Gaps = 15/257 (5%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--- 128 E +H +L+HDDV+D A RRG+ VWG ++++GD L + A +++E E Sbjct: 94 ELMHNFSLVHDDVMDRDATRRGRATVWAVWGETNAIVLGDALHALAGRVLVEMLEPEVAA 153 Query: 129 -ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A+ L TL +G+ V+ + YL + KTA L A + +L A Sbjct: 154 NAVMRLESSCVTLCDGQFEDCDFETRESVSVDGYLEMAAGKTAGLMGCACALGALAANAD 213 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + A+ +G LG+AFQ+VDDV+ G+ N GK +G D K T PV+ A G++ Sbjct: 214 PATVTAMHQFGFQLGLAFQIVDDVMGLWGDPNVTGKPVGSDLARRKKTFPVVAALGSGSE 273 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD----SLRCLPD 303 + + +S +++++A LV+T + ++A + +L LPD Sbjct: 274 AAASLAQLYGAKEPMSADDVRQAI-------DLVETAGGRKAAERQADECIGAALAALPD 326 Query: 304 SSWKKSLMEVVDFCLQR 320 S+ + L+ + + R Sbjct: 327 SARSEDLIALTQLVIAR 343 >gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group] Length = 366 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/251 (29%), Positives = 130/251 (51%), Gaps = 27/251 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP L LA ++ R + A A+E +HT +L+HDD+ Sbjct: 96 EAMRYALLAGGKRVRPALCLAACAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDD 155 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---------IETKSQEA--LEALS-LVA 137 LRRGK +V+G +VL GD LLS +F + I+ A + A+ L Sbjct: 156 LRRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELAR 215 Query: 138 CTLAEG-------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 C +EG +L ++ + + +Y+H+ KTA L A++ + +++ G + Sbjct: 216 CIGSEGLVAGQVVDLEMTGSTETVPLERLEYIHL--HKTAALLEASVVIGAILGGGSDEQ 273 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++L+ Y ++G+ FQ+VDD+LD E+GK G+D + K T P +L G ++ + Sbjct: 274 IESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLL----GLEKSR 329 Query: 251 NFWKSTINDGK 261 F + ++D + Sbjct: 330 EFAEKLLSDAR 340 >gi|108799279|ref|YP_639476.1| polyprenyl synthetase [Mycobacterium sp. MCS] gi|119868395|ref|YP_938347.1| polyprenyl synthetase [Mycobacterium sp. KMS] gi|108769698|gb|ABG08420.1| Polyprenyl synthetase [Mycobacterium sp. MCS] gi|119694484|gb|ABL91557.1| Polyprenyl synthetase [Mycobacterium sp. KMS] Length = 386 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 107/206 (51%), Gaps = 10/206 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK LRP L++A L L + D + A +E H A L+HDD+ D+S RRGK + Sbjct: 54 GGKALRPALSIAVCLGLGGQLDAILPTAATLELYHNAFLIHDDIEDESWWRRGKPTMHID 113 Query: 101 WGNQTSVLVGDFLLSQAFCMVIET-------KSQEALEALSLVACTLAEGELRQLSL--S 151 G +V VGD +LS + +++ + L A++ + EG+ +L S Sbjct: 114 HGIPIAVNVGDAMLSLSLQPLLDNVERIGLGPALRILRAVAHMTRRTVEGQAIELEWVRS 173 Query: 152 KNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + + DYL +++ KT+ F L+ ++ AGV + L+S G +LG AFQ+ DD Sbjct: 174 NAWRLDDADYLTMVELKTSWYSFITPLQAGAIAAGVDPDRLEPLESLGRHLGAAFQITDD 233 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTL 236 +L+ R + E GK IG D GK TL Sbjct: 234 LLNLRADPEEYGKEIGGDLWEGKRTL 259 >gi|300715575|ref|YP_003740378.1| Geranyltranstransferase [Erwinia billingiae Eb661] gi|299061411|emb|CAX58523.1| Geranyltranstransferase [Erwinia billingiae Eb661] Length = 299 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 16/241 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L AT ML A A+E IH +L+HDD+ +DD + Sbjct: 34 NAMEYGALLGGKRLRPFLVYATGEMLGADDAALDAPAAAVECIHAYSLIHDDLPAMDDDS 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK----SQE-------ALEALSLVAC 138 LRRG+ + +G T++L GD L + AF ++ +T S E L S VA Sbjct: 94 LRRGQPTCHIKFGEDTAILAGDALQTLAFSILADTPMPGVSAEYRVAMLSELAQASGVAG 153 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSY 197 L + + +D+ + +H + KT L +A+ + +L AG + + AL Y Sbjct: 154 MCGGQALDLAAEGQQVDLAALEQIH--RHKTGALIRSAVRLGALAAGERGRAALPALDRY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ +GK G D GK T P ++ + + ++ ++ Sbjct: 212 ANAIGLAFQVQDDILDVVGDTAIIGKRQGADQHLGKSTYPALMGLDGARAKAWDLYQESL 271 Query: 258 N 258 + Sbjct: 272 S 272 >gi|229523313|ref|ZP_04412720.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] gi|229339676|gb|EEO04691.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] Length = 294 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 12/241 (4%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L RI + + ++Y + GGKR RP L T ML + A A+E IH +L Sbjct: 20 LNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSL 79 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 80 IHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGTLSAAGETQRVAM 139 Query: 138 C-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN 188 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG + Sbjct: 140 IQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKG 199 Query: 189 -SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ L Y +G+AFQ+ DD+LD + +GK G D K T P +L +R + Sbjct: 200 RAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLERAQQ 259 Query: 248 R 248 + Sbjct: 260 K 260 >gi|304570553|ref|YP_266034.2| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062] Length = 290 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 120/237 (50%), Gaps = 12/237 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y +F GGK++R + + + + + + A+E IH +L+HDD+ +DD +R Sbjct: 32 MEYGLFPGGKKIRSKILIDIGAIFKINYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIR 91 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTL--AE 142 RGK++ + +G T+VL G+ LL+ AF +++ + + + ++ LS + L A Sbjct: 92 RGKISTHIKFGESTAVLAGNSLLTMAFEILVSSSLKINEKIKVDLVKKLSETSGHLGIAG 151 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+ LS K + IK KT LFS V +I N+ + ++ G N+G Sbjct: 152 GQYLDLSFEKKKVSKSKIIDMEIK-KTGKLFSFCCAVPVIIKRKSNTQIKFFENIGSNIG 210 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 + FQ+ DD++D++G GK G+D + GK TL +L +Q K I D Sbjct: 211 LLFQIADDLIDFKGSTVIAGKLTGKDKKKGKATLISLLGYQNAIKYADKIKSKIIKD 267 >gi|41409944|ref|NP_962780.1| IdsA [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398777|gb|AAS06396.1| IdsA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 394 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 106/206 (51%), Gaps = 10/206 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK LRP L++AT L L + + A +E H A L+HDD+ D+S RRGK + Sbjct: 58 GGKALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIEDESWWRRGKPTLHID 117 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQ----EALEALSLVAC---TLAEGELRQLSL--S 151 +G +V VGD +LS + +++ + AL L VA +G+ +L S Sbjct: 118 YGVPVAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAVATMTRKTVDGQALELDWVHS 177 Query: 152 KNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + + DYL +++ KT+ F L+ ++ AG L+S G +LG AFQ+ DD Sbjct: 178 NTWRLDDADYLEMVELKTSWYSFITPLQAGTVAAGATPDRMAPLESLGRHLGAAFQITDD 237 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTL 236 +L+ R + E GK IG D GK TL Sbjct: 238 LLNLRADPQEYGKEIGGDLWEGKRTL 263 >gi|188996777|ref|YP_001931028.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931844|gb|ACD66474.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 287 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 139/261 (53%), Gaps = 14/261 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 E + + ++Y + +GGKR+RP+L + A A+ + ++ + +A + EFIHT +L+HDD+ Sbjct: 28 EELSNAMRYSLEAGGKRIRPILVIECAKAVKEDVNVEDFIDIAISTEFIHTYSLIHDDLP 87 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 LRRGK V+G ++L GD LL+ AF ++ K A + + ++ Sbjct: 88 AMDDDDLRRGKPTCHKVFGEAIAILAGDGLLTFAFELISNNKKLSAEKIVKVINILSHNV 147 Query: 144 ELRQLSLSKNLDV----TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + + D+ + +++H+ +KTA SA ++ ++A LK+YG+ Sbjct: 148 GIYGMVGGQAADILPNFKDVEFIHL--NKTAKFLSACCQIGCVLADATEEEILKLKNYGI 205 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF---WKST 256 N+G+AFQ+ DD+LD G+ + GK + +D K T P + ++ + K++ K+ Sbjct: 206 NIGLAFQIWDDILDEIGDEEKTGKRLHKDKDKNKITYPSLYGLEKSIQIAKDYVEKAKNE 265 Query: 257 INDGKISVENLKKA-FIIMRE 276 I D K S +K A +II RE Sbjct: 266 IKDLKNSEFLIKLADYIISRE 286 >gi|330719242|ref|ZP_08313842.1| geranyltranstransferase [Leuconostoc fallax KCTC 3537] Length = 292 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 111/199 (55%), Gaps = 19/199 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDSA 89 ++KY + +GGKRLRP+LTLA +L A A+E+IH+ +L+HDD+ +D+ Sbjct: 35 MMKYAVLNGGKRLRPLLTLAVVQSFGRTITADILKAASAVEWIHSYSLVHDDLPAMDNDT 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-------LEALSLVAC--TL 140 +RRGK + ++G +LVGD LL+ AF ++ +++S E ++ALS +A + Sbjct: 95 MRRGKPSVHALFGEANGILVGDALLTGAFAILSDSRSNEDVQTRLDLIQALSALAGGYGM 154 Query: 141 AEGELRQLSLSKNLDVTEED------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G++ + N D D V + KTA L + A E +++A Q SV+ L Sbjct: 155 VYGQVNDMRNHNNTDDNNADIGVDWLLSAVHRPKTAALLTYASEAGAMLA-QQRSVQTHL 213 Query: 195 KSYGMNLGIAFQLVDDVLD 213 + +G + G+A+Q+ DD+ D Sbjct: 214 RQFGDSFGVAYQIQDDIDD 232 >gi|300811648|ref|ZP_07092124.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497349|gb|EFK32395.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 287 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 22/249 (8%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHD 82 SD +++ Y + +GGKRLRP+L LAT AL +E + V AC IE IHT +L+HD Sbjct: 27 SDDPRFAEIMAYSVMAGGKRLRPLLFLATLDALGVEIT-EKEVQAACGIELIHTYSLIHD 85 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEA 132 D+ +D+ RRG++ + WG ++L GD L + + + EA+ Sbjct: 86 DLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQPLGIQWIAQAEHNWKLVEIITEAVGP 145 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +VA G+ + + N D +EE H+ KT L A++++++ +A N Q Sbjct: 146 KGMVA-----GQYLDIDTTNNEDSSEEVIDHMEWLKTGCLILASVQMATALAACPNQQAQ 200 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 ++ + G ++QL DD++D E GK +D GK +L G + +N Sbjct: 201 KYLAFAKHFGRSYQLYDDLVDIVESQEEAGKATHKDQEVGKNNSLTML----GAEATRNE 256 Query: 253 WKSTINDGK 261 K I GK Sbjct: 257 LKQLIEKGK 265 >gi|116327487|ref|YP_797207.1| geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120231|gb|ABJ78274.1| Geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 313 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 21/248 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + +GGKRLRP+L LA + N +LL ++E IHT +L+HDD+ +D+ Sbjct: 39 EAMKYSLVAGGKRLRPVLVLAAFGGSQNETRNTLLLGSSLECIHTYSLIHDDLPSMDNDD 98 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLV--------ACT 139 RRG + T++L GD L S AF + I+ +++ L+ A Sbjct: 99 FRRGLPTLHKRFSEATAILTGDALNSFAFYFISLIQGDNEDYFLHRDLLEILHTGCGAPG 158 Query: 140 LAEGELRQLSL----SKNLDV-TEEDYLHVI----KSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ L + +KN + +E++ + ++ + KT L AAL + + + Sbjct: 159 MVSGQIYDLQMERENTKNRNSKSEQEKVAMVQLTHRLKTGALIKAALLLGNRLRKDWKKR 218 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L YG +LG+ FQ+ DD+LD G +GK G+D R GK T P +L +R K + Sbjct: 219 EGPLSKYGEDLGLLFQITDDILDVEGTQESLGKTPGKDQRTGKITYPALLGMERCKKMVQ 278 Query: 251 NFWKSTIN 258 K+ I+ Sbjct: 279 ELQKNLIS 286 >gi|315639632|ref|ZP_07894772.1| geranyltranstransferase [Enterococcus italicus DSM 15952] gi|315484593|gb|EFU75049.1| geranyltranstransferase [Enterococcus italicus DSM 15952] Length = 289 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 30/270 (11%) Query: 12 MEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LA 68 +E V +L I ++ E + + ++Y + +GGKR+RP+L +T + + V +A Sbjct: 8 LESVEMTMLTAISEQTNEEQLAESMRYSVEAGGKRIRPLLLASTYALYQKNVSQAVCQVA 67 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IET 124 A+E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ AF ++ E Sbjct: 68 AAVELVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTLAFQVLGQAEL 127 Query: 125 KSQEALEALSLVACTLA------------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 + + L+L+A T E E +QLSL E + KT L Sbjct: 128 ADDKKVACLTLLAQTAGTLGMVAGQAADIEAEGKQLSL--------EQLQGIHARKTGEL 179 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 ++ +I G + L S+ LG+AFQ+ DD+LD E+GK D Sbjct: 180 IRFSVIAGGIIGGASAKEQAQLDSFARKLGLAFQIKDDLLDVLATTEELGKTAHRDSVLQ 239 Query: 233 KPTLPVILAFQRGT---KREKNFWKSTIND 259 K T P +L Q+ ++ N +S + D Sbjct: 240 KSTYPQLLGIQKAKDELTKQVNEARSIVQD 269 >gi|115378176|ref|ZP_01465349.1| heptaprenyl diphosphate synthasecomponent II [Stigmatella aurantiaca DW4/3-1] gi|310821415|ref|YP_003953773.1| polyprenyl synthase family protein [Stigmatella aurantiaca DW4/3-1] gi|115364808|gb|EAU63870.1| heptaprenyl diphosphate synthasecomponent II [Stigmatella aurantiaca DW4/3-1] gi|309394487|gb|ADO71946.1| Polyprenyl synthase family protein [Stigmatella aurantiaca DW4/3-1] Length = 332 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 8/227 (3%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 SG KR RPML + ++ V +A + E IH+A+LLHDDVVD RRG+ Sbjct: 47 SGSKRARPMLVSLFGDAVGLSSEHLVDVAVSAELIHSASLLHDDVVDAGMFRRGRPTVNA 106 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 WGN +V+ GD +LS + + + + ALS+V+ + + ++ +++ Sbjct: 107 RWGNIVAVMSGDLILSTTLLRLAQLDERLSRSALSVVS-EMTRAAITEVEARGVMELPLP 165 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 ++ + KT LF ++ +A Q + +G +LG+AFQ+ DD+ D G Sbjct: 166 RLRYIAEGKTGSLFGWCGHAAATLAN-QPEAAKRFDGFGRHLGVAFQIADDIRDVLG--T 222 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQR--GTKRE-KNFWK-STINDGKI 262 ++GK D ++ P++P++LA ++ G +R+ K+ W S+I +I Sbjct: 223 DVGKPQYADLQSRTPSMPILLAVEKDEGLRRKLKDAWAFSSITPDRI 269 >gi|170119528|ref|XP_001890894.1| predicted protein [Laccaria bicolor S238N-H82] gi|164634032|gb|EDQ98458.1| predicted protein [Laccaria bicolor S238N-H82] Length = 240 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 26/256 (10%) Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 +HTA+LLHDDV+D S LRRG +A +G++ SVL G+F+L +A + E + Sbjct: 1 MLHTASLLHDDVIDASPLRRGAPSAPSKFGSKLSVLGGNFILGRASTALARLGDAEVTQL 60 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV-- 190 ++ V L EGE+ Q+ ++ YL KTA L + + ++ G + Sbjct: 61 IASVISNLVEGEILQMR--------DKTYL-----KTASLMAKGARSAVVLGGCEEGEVW 107 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNE------MGKNIGEDFRNGKPTLPVILAFQR 244 + +YG N+GIAFQL+DD+LDY +GK G D + G T P + A++ Sbjct: 108 KDIAYAYGRNVGIAFQLIDDILDYESTSTPGSADLTLGKPGGADLQLGLATGPALYAWEE 167 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + + + G + + A ++ + + T+ A + +KAK+ L LP+S Sbjct: 168 FPEMGELIGRKFEGPGDVEM-----ARSLVHRSSGVHRTKLLAKEFAEKAKEVLDELPES 222 Query: 305 SWKKSLMEVVDFCLQR 320 K+ L+ + + + R Sbjct: 223 VAKRGLVALTERVVGR 238 >gi|197334446|ref|YP_002155475.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio fischeri MJ11] gi|197315936|gb|ACH65383.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio fischeri MJ11] Length = 298 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 80/287 (27%), Positives = 145/287 (50%), Gaps = 22/287 (7%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +++E++N L++I + + + +KY + GGKR RP L TA ML + + A Sbjct: 15 RNIEQLNQW-LEKIEIQQQPLTEAMKYSLLLGGKRARPYLVYITAQMLGIKAEFADSAAA 73 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------ 121 AIE +H+ +L+HDD+ +D+ LRRG + + T++L GD L + AF ++ Sbjct: 74 AIECVHSYSLIHDDLPAMDNDDLRRGHATCHIKYDEATAILAGDALQTLAFEILANGQLS 133 Query: 122 --IETKSQEALEALSLV--ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAA 176 ET + + LS A + G+ L K +D+T + +H +KT L A Sbjct: 134 DDAETSRIDMIRVLSKASGASGMCMGQSLDLQAEGKKVDLTSLERIHA--NKTGALIKCA 191 Query: 177 LEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +++ +L AG + ++ L+ Y +G+AFQ+ DD+LD + +GK G D K T Sbjct: 192 VQLGALCAGDKGKAILPQLEVYADAIGLAFQVQDDILDIISDTETLGKPQGSDLELDKST 251 Query: 236 LPVILAFQRGTKREKNFWKSTI---NDGKISVENLK--KAFIIMREN 277 P +L + + + +++ I ND + + ++ ++I R+N Sbjct: 252 YPALLGLEGAKHKAEQLYQTAIEALNDIPYNTDAMQAFAQYVIERKN 298 >gi|156740413|ref|YP_001430542.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] gi|156231741|gb|ABU56524.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] Length = 317 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 8/271 (2%) Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 LR L + A + Y + A A E IH AT +HD++++++A RRG+ W Sbjct: 50 LRAALVVLAARLGRYDARRVIHAAAAAELIHFATAVHDNLINEAARRRGQPIGDQRWNGD 109 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164 +++ GD+LL+ A + + S V T EG L ++ LD + +V Sbjct: 110 VALMSGDYLLALAASEMALAPDARIISMYSRVVMTFCEGRLAPVTAVAPLDQALAQHEYV 169 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 ++S+TA LF A V + G +++ L +G LG+A + +V DY E++ G Sbjct: 170 VESRTAALFETAARVGVVCGGSDDTLSNTLGRFGRELGMAMHIAAEVRDY--EID--GPY 225 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284 G D R G+ TLP+I A G + + ++ L A +R + Sbjct: 226 AGHDLRAGRITLPLIYAVDAGGGAD---LAAVVDQHAPDTHYLTAAIDQVR-RLGVPPAR 281 Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 R + Q+A D+L +P + +L + D Sbjct: 282 ARMRDHAQRAMDALAFVPPGDIRNALGALAD 312 >gi|21910690|ref|NP_664958.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315] gi|28895620|ref|NP_801970.1| geranyltranstransferase (farnesyl diphosphate synthase) [Streptococcus pyogenes SSI-1] gi|21904893|gb|AAM79761.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315] gi|28810869|dbj|BAC63803.1| putative geranyltranstransferase (farnesyl diphosphate synthase) [Streptococcus pyogenes SSI-1] Length = 290 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 17/229 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + D + Y + SGGKR+RP++ L M+E G + H LA A+E IHT +L+HDD Sbjct: 24 EELIDAILYSVDSGGKRIRPLILLE---MIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ RRG++ +G T++L GD L F ++ + + ++ + +LA Sbjct: 81 LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLA 140 Query: 142 EGELRQLSLSKNLDVTEEDY------LHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G + + LD+ E+ L +I +KT L + + ++L+ +VRQ L Sbjct: 141 SGTFGMVG-GQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTDQAITVRQQL 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + GM +G AFQ+ DD+LD ++GK +D K T P +L + Sbjct: 200 EQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKATYPSLLGLE 248 >gi|183983202|ref|YP_001851493.1| polyprenyl synthetase IdsB_2 [Mycobacterium marinum M] gi|183176528|gb|ACC41638.1| polyprenyl synthetase IdsB_2 [Mycobacterium marinum M] Length = 345 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 8/182 (4%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC------MVIETK 125 E +H +L+HDDV+D RRG+ VWG +++++GD L C M+ Sbjct: 94 ELMHNFSLVHDDVMDRDVTRRGRATVWTVWGETSAIMLGDAL--HVLCSRVLAEMLAPEV 151 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + A+ L L G++ VT + YL + KTA L A E+ +L AG Sbjct: 152 AMTAIATLESSFLGLRVGQVDDGDFETPKRVTVDGYLRMAAGKTAGLMGCACELGALTAG 211 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 A++ +G +LG+AFQ++DD++ G+ + GK +G D K TLPVI A + G Sbjct: 212 ADPLTVSAMREFGYHLGLAFQILDDIVGIWGDPSVTGKPVGSDLARRKKTLPVIAALESG 271 Query: 246 TK 247 + Sbjct: 272 SS 273 >gi|154304670|ref|XP_001552739.1| hypothetical protein BC1G_08074 [Botryotinia fuckeliana B05.10] gi|150853974|gb|EDN29166.1| hypothetical protein BC1G_08074 [Botryotinia fuckeliana B05.10] Length = 220 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 104/228 (45%), Gaps = 24/228 (10%) Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEED- 160 +VL GDFLLS+A + + E E L+ V L EGE QL + KN TEE Sbjct: 2 AVLAGDFLLSRASVALARLRDAEVTELLATVIANLVEGEFMQLKNTAQDEKNPVWTEETI 61 Query: 161 --YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 YL K+A L S + ++L+ G A YG NLG+AFQLVDD+LDY Sbjct: 62 SYYLQKTYLKSASLISKSCRAAALLGGSDGVTVDAAYDYGKNLGLAFQLVDDMLDYTISE 121 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR--- 275 E+GK G D G T P+I A WK+ G + + ++R Sbjct: 122 KELGKPAGADLELGLATAPLIFA-----------WKNNKELGSLVGRKFSQEGDVLRARE 170 Query: 276 ---ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ L T A Y +A ++ PDS K L+E+ D L+R Sbjct: 171 LVLQSDGLEQTRALAEEYASRAISAISAFPDSEAKDGLIEMADKTLKR 218 >gi|20092943|ref|NP_619018.1| polyprenyl synthetase [Methanosarcina acetivorans C2A] gi|19918255|gb|AAM07498.1| polyprenyl synthetase [Methanosarcina acetivorans C2A] Length = 295 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 118/223 (52%), Gaps = 10/223 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +V+++ GGKR+RP++ L + + + A A+E +H+A+L+HDD++D +RR Sbjct: 41 MVEHVCHFGGKRIRPIILLLASEICSGSYSRSLDAALAVEMMHSASLIHDDLLDQGLIRR 100 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 +A +G ++L GD+L++++ I ++ + +AEGE+ L L Sbjct: 101 NLPSAPEKFGPSRALLCGDYLIAKSIAF-ISPYGEKVIRDFGKAGMDMAEGEVLDLRLDD 159 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + E+DY I KTA LF+ + + + G ++ + +G +LG A+Q+VDD+L Sbjct: 160 D-KFGEDDYFKCIYKKTASLFAISASIGAYTGGADEALAERFSFFGNSLGTAYQIVDDIL 218 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++ EV E G++ + TLP I + R +E+ KS Sbjct: 219 EFL-EVVE-----GKESKFTSETLPHI--YMRKMSKEEALEKS 253 >gi|87307782|ref|ZP_01089925.1| geranylgeranyl pyrophosphate synthetase (precursor) [Blastopirellula marina DSM 3645] gi|87289396|gb|EAQ81287.1| geranylgeranyl pyrophosphate synthetase (precursor) [Blastopirellula marina DSM 3645] Length = 298 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 14/254 (5%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C D + + ++Y + + GKRLRP+LTL A + ACA+E IH +L+HDD Sbjct: 34 CPD--RLQEAIRYSLLAPGKRLRPLLTLMAAETCGSDRTQAMPSACAVEMIHAYSLIHDD 91 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + LRRG+ + T++L GD LL++A +V + + A S A Sbjct: 92 LPAMDDDDLRRGRPTCHKAFDEATAILAGDALLARALEIVADGYQDPLVAARSCRELAKA 151 Query: 142 EGELRQLS-----LSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G + L++ + + L I + KT + +L + ++ AG + L Sbjct: 152 AGATALVGGQADDLNEQFGSGDVEMLKAIHRRKTGAMICVSLRLGAIAAGADDQQVAQLN 211 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 YG +G+AFQ+VDD+LDY G+ +GK +G+D GK T P ++ G + +S Sbjct: 212 LYGEQIGLAFQIVDDLLDYAGDEAALGKRVGKDAERGKLTYPGLI----GVAESRRQAES 267 Query: 256 TINDGKISVENLKK 269 I K S+ + + Sbjct: 268 LIAGAKQSLADFGE 281 >gi|83746515|ref|ZP_00943566.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Ralstonia solanacearum UW551] gi|207743826|ref|YP_002260218.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum IPO1609] gi|83726846|gb|EAP73973.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Ralstonia solanacearum UW551] gi|206595226|emb|CAQ62153.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum IPO1609] Length = 299 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 21/226 (9%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y GKR+RP+L A + E + ++CA+E IH +L+HDD+ LR Sbjct: 37 MRYATLGAGKRVRPLLVHAAGALGEASPEALDRVSCAVEMIHAYSLVHDDMPCMDDDDLR 96 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG+ + T++LVGD L +QAF ++ E L A+S V GEL + S S Sbjct: 97 RGRPTVHRAYDEATALLVGDALQTQAFVVLAE------LGAVSPVTRAALVGELARASGS 150 Query: 152 ------KNLDVTE------EDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + +D+ +D L + + KT L A+L + +L AGV + + + +Y Sbjct: 151 LGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNAAALEQVDAYA 210 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ+VDD+LD + +GK G+D + KPT IL +R Sbjct: 211 GAVGLAFQVVDDILDVTADTATLGKTAGKDEADDKPTYVSILGLER 256 >gi|139473477|ref|YP_001128193.1| geranyltranstransferase [Streptococcus pyogenes str. Manfredo] gi|134271724|emb|CAM29957.1| putative geranyltranstransferase [Streptococcus pyogenes str. Manfredo] Length = 290 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 118/231 (51%), Gaps = 21/231 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + D + Y + SGGKR+RP++ L M+E G + H LA A+E IHT +L+HDD Sbjct: 24 EELIDAILYSVDSGGKRIRPLILLE---MIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ RRG++ +G T++L GD L F ++ + + ++ + +LA Sbjct: 81 LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLA 140 Query: 142 EGELRQLSLSKNLDVTEEDY---------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 G + + LD+ E+ +H+ +KT L + + ++L+ +VRQ Sbjct: 141 SGTFGMVG-GQMLDMKGENQSLSLSQLSLIHL--NKTGKLLTFPFKAAALVTEQAITVRQ 197 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 L+ GM +G AFQ+ DD+LD ++GK +D K T P +L + Sbjct: 198 QLEQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAKKATYPSLLGLE 248 >gi|32471772|ref|NP_864766.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula baltica SH 1] gi|32397143|emb|CAD72450.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula baltica SH 1] Length = 317 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 121/262 (46%), Gaps = 30/262 (11%) Query: 20 LKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L+ C D +P+ ++Y + + GKRLRPMLT+ A ++ + A A+E IH Sbjct: 35 LQAACEDRPGVPERLAAAIRYAVLAPGKRLRPMLTIMAAEACGGDAESAMPSAVAVEMIH 94 Query: 76 TATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-----TKSQE 128 +L+HDD+ LRRG+ + + T++L GD L S AF + TKS Sbjct: 95 AYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAGDALQSMAFAHLHHSTSDATKSAA 154 Query: 129 ALEALSLVA--CTLAEGELRQLSLSKNLDVTEEDY---------LHVIKS-KTAVLFSAA 176 + L+ A L G+ L K T ED+ L I KT LF+A Sbjct: 155 LIGTLATAAGPAGLVGGQADDLDAEK---YTVEDFGGADAALKHLEAIHHRKTGALFTAC 211 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + ++ AG + AL Y G+AFQ+ DD+LD +GK G+D GK T Sbjct: 212 AAMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDCTSTDERLGKRTGKDDGRGKLTY 271 Query: 237 PVILAFQRGTKREKNFWKSTIN 258 P ++ G R + +STI+ Sbjct: 272 PGLM----GLDRARAHAESTIH 289 >gi|322412220|gb|EFY03128.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 290 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 17/229 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + D + Y + SGGKR+RP++ L M+E G + H LA A+E IHT +L+HDD Sbjct: 24 EELIDAILYSVDSGGKRIRPLIILE---MIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ RRG++ +G T++L GD L F ++ + + ++ + +LA Sbjct: 81 LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLA 140 Query: 142 EGELRQLSLSKNLDVTEEDY------LHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G + + LD+ E+ L +I +KT L + + ++L+ +VRQ L Sbjct: 141 SGTFGMVG-GQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPFKAAALVTEQTITVRQQL 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + GM +G AFQ+ DD+LD ++GK +D K T P +L + Sbjct: 200 EQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKATYPSLLGLE 248 >gi|167842189|ref|ZP_02468873.1| geranyltranstransferase [Burkholderia thailandensis MSMB43] Length = 294 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 117/224 (52%), Gaps = 16/224 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + + A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGASEAALNAASSALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--TLAEGELRQ 147 LRRGK + + T++LVGD L SQAF + + + A +LV C LA G + Sbjct: 94 LRRGKPTVHVKYDEPTALLVGDALQSQAFVALTDAAALPADRQAALV-CELALASGSI-G 151 Query: 148 LSLSKNLDVTE------EDYLHVI-KSKTAVLFSAALEVSSLIAGVQNS--VRQALKSYG 198 ++ + +D+ D L + + KT L A++ + +L AG S +AL +Y Sbjct: 152 MAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRMGAL-AGETPSGDAMRALDAYA 210 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D N KPT I+ Sbjct: 211 AAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGL 254 >gi|83716251|ref|YP_438813.1| geranyltranstransferase [Burkholderia thailandensis E264] gi|167577162|ref|ZP_02370036.1| geranyltranstransferase [Burkholderia thailandensis TXDOH] gi|167615332|ref|ZP_02383967.1| geranyltranstransferase [Burkholderia thailandensis Bt4] gi|257141897|ref|ZP_05590159.1| geranyltranstransferase [Burkholderia thailandensis E264] gi|83650076|gb|ABC34140.1| geranyltranstransferase [Burkholderia thailandensis E264] Length = 294 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 118/223 (52%), Gaps = 14/223 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + + A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGASEAALNAASSALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-----QEALE---ALSLVACTLA 141 LRRGK + + T++LVGD L SQAF + + + Q AL AL+ + +A Sbjct: 94 LRRGKPTVHVKYDEPTALLVGDALQSQAFVALTDAAALPADRQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS--VRQALKSYGM 199 G+ L+ S + +T + + + KT L A++ + +L AG S +AL +Y Sbjct: 154 GGQAIDLA-SVGVALTRDALETMHRMKTGALLRASVRMGAL-AGETPSDDAMRALDAYAA 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D N KPT I+ Sbjct: 212 AVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGL 254 >gi|186940997|dbj|BAG31127.1| geranyltranstransferase [Xanthomonas perforans 91-118] Length = 291 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 10/232 (4%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L R + + +++ + GGKR+RP+L A+ + D A A+E IH +L Sbjct: 21 LPRATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSL 80 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD ALRRG+ + + T++L GD L ++AF + + T S A +S + Sbjct: 81 VHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFEL-LATASASAELRVSWMQ 139 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSV 190 + + LD+ L ++ KT L AA+ + +L + Sbjct: 140 SLATAAGAAGMCGGQALDIDATGQLQSLQDLQRMHALKTGALIRAAVRMGALTGCAAAAD 199 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +Q L + LG+AFQ+ DD+LD ++GK G+D K T P +L Sbjct: 200 QQRLDEFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQAKSTYPALLGM 251 >gi|116331899|ref|YP_801617.1| geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116125588|gb|ABJ76859.1| Geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 313 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 21/248 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + +GGKRLRP+L LA + N +LL ++E IHT +L+HDD+ +D+ Sbjct: 39 EAMKYSLVAGGKRLRPVLVLAAFGGSQNETRNTLLLGSSLECIHTYSLIHDDLPSMDNDD 98 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLV--------ACT 139 RRG + T++L GD L S AF + I+ +++ L+ A Sbjct: 99 FRRGLPTLHKRFSEATAILTGDALNSFAFYFISLIQGDNEDYFLHRDLLEILHTGCGAPG 158 Query: 140 LAEGELRQLSL----SKNLDV-TEEDYLHVI----KSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ L + +KN + +E++ + ++ + KT L AAL + + + Sbjct: 159 MVSGQIYDLQMERENTKNRNSKSEQEKVAMVQLTHRLKTGALIKAALLLGNRLRKDWKKR 218 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L YG +LG+ FQ+ DD+LD G +GK G+D R GK T P +L +R K + Sbjct: 219 EGPLSKYGEDLGLLFQITDDILDVEGTQESLGKTPGKDQRTGKITYPALLGMERCKKMVQ 278 Query: 251 NFWKSTIN 258 K+ I+ Sbjct: 279 ELQKNLIS 286 >gi|297564500|ref|YP_003683472.1| polyprenyl synthetase [Meiothermus silvanus DSM 9946] gi|296848949|gb|ADH61964.1| Polyprenyl synthetase [Meiothermus silvanus DSM 9946] Length = 332 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 82/290 (28%), Positives = 146/290 (50%), Gaps = 12/290 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK LR ML + L R + + +A A+E L+HDD+ D S RRG+ A + Sbjct: 43 GGKMLRGMLLVYAGLAHGARLEQLLPVAAALELFQNWALIHDDIEDASEERRGRPALHRL 102 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGELRQLSL--SKNLDVT 157 +G ++ GD L ++ + M+IE + S L+ V A+G+ ++S + D+T Sbjct: 103 YGMPLALNAGDALHARMWAMLIEARASYLVLDEFVRVVDLTAQGQHLEMSWMQTHRFDLT 162 Query: 158 EEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 E+DYL + K A + A L + +L AGV+ G+NLGI FQ+VDDVL+ G Sbjct: 163 EQDYLLMCAQKAAYYTAVAPLRLGALSAGVEPPA--TYIEAGLNLGIGFQIVDDVLNLEG 220 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII--M 274 + + GK I D GK TL ++ + ++ E+ ++ + + + + A++ + Sbjct: 221 DPVKYGKEIAGDLWEGKRTLILLRWLSQASEPERIRAETLLRTPREAKHPEEVAWLHQRL 280 Query: 275 RENRALVDTEYRAYSYGQKAKDSLRC----LPDSSWKKSLMEVVDFCLQR 320 RE+ A+ + A ++LR LPD ++++ +++ ++R Sbjct: 281 RESGAVAYAQAEAERRLAAGLEALRPVLAELPDQEAAQTMLRLLESLVRR 330 >gi|50914597|ref|YP_060569.1| dimethylallyltransferase [Streptococcus pyogenes MGAS10394] gi|50903671|gb|AAT87386.1| Dimethylallyltransferase [Streptococcus pyogenes MGAS10394] Length = 290 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 17/229 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + D + Y + SGGKR+RP++ L M+E G + H LA A+E IHT +L+HDD Sbjct: 24 EELIDAILYSVDSGGKRIRPLILLE---MIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ RRG++ +G T++L GD L F ++ + + ++ + +LA Sbjct: 81 LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLA 140 Query: 142 EGELRQLSLSKNLDVTEEDY------LHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G + + LD+ E+ L +I +KT L + + ++L+ +VRQ L Sbjct: 141 SGTFGMVG-GQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQL 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + GM +G AFQ+ DD+LD ++GK +D K T P +L + Sbjct: 200 EQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAKKATYPSLLGLE 248 >gi|328886497|emb|CCA59736.1| Octaprenyl-diphosphate synthase ; Dimethylallyltransferase ; Geranyltranstransferase (farnesyldiphosphate synthase) ; Geranylgeranyl pyrophosphate synthetase [Streptomyces venezuelae ATCC 10712] Length = 352 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 3/207 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L L +A + + A A+E +H +LLHDD++D RR + V Sbjct: 62 GKAVRPALALLSAEAAGVAPEVGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVH 121 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVTE 158 G ++LVGD L + A +++E + EA A L+ + L +G+ + +S VT Sbjct: 122 GPAQAILVGDALFALANEILLELGTVEAGRATRRLTTASRKLIDGQAQDISYEHRERVTV 181 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 E+ L + +KT L + A+ + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 182 EECLEMEGNKTGALLACAVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVDDLLGIWGDP 241 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 242 EATGKQTWSDLRQRKKSLPVVAALAAG 268 >gi|320540321|ref|ZP_08039973.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson] gi|320029641|gb|EFW11668.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson] Length = 306 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 16/216 (7%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKRLRP L T M +N A A+E IH +L+HDD+ +D+ LRRG+ Sbjct: 50 GGKRLRPFLVYTTGQMFGIAQNNLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCH 109 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVACTLAEGELRQLSLSKNLDV 156 + +G ++L GD L S AF ++ + + + + L++V+ A + + +++D+ Sbjct: 110 IKFGEANAILAGDALQSLAFSILADAEMPDVALRDRLAMVSELAAASGVAGMCGGQSMDL 169 Query: 157 TEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK---SYGMNLGIAFQ 206 E + + KT L AA+ + +L AG +S R AL Y +G+AFQ Sbjct: 170 DAEGKQIGLAALEQIHRHKTGALIRAAIRLGALAAG--SSGRAALPLLDRYAAAIGLAFQ 227 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + DD+LD GE ++GK G D ++ K T P +L Sbjct: 228 VQDDILDVIGETEKIGKRQGADQQHRKSTYPALLGL 263 >gi|257054017|ref|YP_003131850.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940] gi|256692780|gb|ACV13117.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940] Length = 308 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 77/287 (26%), Positives = 144/287 (50%), Gaps = 20/287 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y I +GGKR+RP L + M++ ++ + +A +E +H TL+HDD++D RR + Sbjct: 38 YPIDTGGKRIRPGLVFLISEMVDVPREDALDIAAGVELLHNFTLVHDDIIDGDEYRRDEP 97 Query: 96 AARLVWGNQTSVLVGDFLLSQA-FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 +G +++ +GD + ++A C ET+ AL V T+ GE + ++ Sbjct: 98 TLWAKYGEGSAINLGDMMFAKAILCFPPETRDL----ALDTV-ITVTNGEQMDIDFAERR 152 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 D+T E+Y+ +++ KT L ++ +A + S +LG AFQ+ DD+LD+ Sbjct: 153 DITVEEYMTMVRRKTGALLELCVDAPLALAETDLDL-----SGFTSLGPAFQIRDDLLDF 207 Query: 215 R-GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 + G+ E IG D R GK TL V+ A R + + + + E++++ I Sbjct: 208 QEGKGRE---KIGNDVRAGKRTLMVVHA---DDDRVYDILDKPFD--ETTDEDVREVMQI 259 Query: 274 MRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ ++ E R + ++A+ ++ LPDS ++ L + F +R Sbjct: 260 LQAEGSMEFAEQRMNALIEEARTAIADLPDSPGQEKLEALGRFITER 306 >gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54] Length = 303 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 29/285 (10%) Query: 19 ILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL------LA 68 +L + + +P + ++Y + GGKR+R L A G + A Sbjct: 22 VLDDLLPPADAVPARLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAVEASLDRAA 81 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 A+E IH +L+HDD+ +DD LRRG+ + + T++L GD L AF ++ Sbjct: 82 AAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATAMLAGDALQPLAFELLASMPI 141 Query: 127 QEAL-----EALSLVACT--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 AL ++L+ A + +A G+ L S+ ++L + +H +K T + + ++ Sbjct: 142 APALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDDLQLMHSMK--TGAMLACSVA 199 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + ++AG ++ RQAL Y +G+AFQ+VDD+LD + +GK G+D KPT Sbjct: 200 LGGIVAGASSASRQALDVYAQAMGLAFQVVDDILDVTADSASLGKTPGKDAAENKPTYVS 259 Query: 239 ILAFQR-----GTKREKNFWK-STINDGKISVENLKKAFIIMREN 277 +L G RE + D + L FI++R+ Sbjct: 260 LLGLDEARAFAGELREAALAALEPLGDAGSRLAELAD-FIVLRDR 303 >gi|121610223|ref|YP_998030.1| polyprenyl synthetase [Verminephrobacter eiseniae EF01-2] gi|121554863|gb|ABM59012.1| farnesyl-diphosphate synthase [Verminephrobacter eiseniae EF01-2] Length = 314 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 119/242 (49%), Gaps = 24/242 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLAT--------ALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 + ++Y + GGKRLRP+L LA + + ACA+E IH +L+HDD Sbjct: 45 EAMRYAVLDGGKRLRPLLVLAAYQAVCSGQPAPCAWHDAAALRAACAVELIHAYSLVHDD 104 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC--------MVIETKSQEAL--- 130 + +D+ LRRGK A + +G ++L GD L QAF M I +Q AL Sbjct: 105 LPCMDNDVLRRGKPTAHVRFGPARALLAGDAL--QAFAFELLTPEDMPIPAATQAALCRL 162 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A + + +A G+ L+ S L +TE + + KT L A++ + ++ + Sbjct: 163 LARAAGSTGMAGGQAIDLA-SVGLRLTEGQLRQMHRLKTGALLQASVLMGAVCGQAAPAA 221 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL YG LG+AFQ+VDD+LD + +GK G+D KPT +L +R + + Sbjct: 222 YRALSDYGAALGLAFQVVDDILDVVADSATLGKTAGKDAIAAKPTYVSLLGLERAQAQAR 281 Query: 251 NF 252 Sbjct: 282 EL 283 >gi|58617311|ref|YP_196510.1| putative geranyltranstransferase [Ehrlichia ruminantium str. Gardel] gi|58416923|emb|CAI28036.1| Possible geranyltranstransferase [Ehrlichia ruminantium str. Gardel] Length = 276 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 109/195 (55%), Gaps = 24/195 (12%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 +KY +F+ GK +RP L A+A + D + ++ AIE IH +L+HDD+ +D+ R Sbjct: 37 MKYSLFTPGKYIRPFLVNASAQIFNVNIDRTLPVSVAIELIHVYSLIHDDLPGMDNEDTR 96 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF-------------CMVIETKSQEALEALSLVAC 138 RG++++ + ++L GD LL+ AF C +I+ +Q A+ ++ Sbjct: 97 RGQLSSHKKFTEAIAILTGDALLTLAFEVLSTINESPYIRCRIIQVLTQ-AIGYQGMIKG 155 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + E +++K D+ + +H +K TA LFSAA EV ++ G ++ +LK+YG Sbjct: 156 QVLDTE----TIAK--DINDIKTMHTLK--TACLFSAACEVGGILGGASDTELNSLKNYG 207 Query: 199 MNLGIAFQLVDDVLD 213 +NLG AFQ+ DD+ D Sbjct: 208 LNLGFAFQIKDDIAD 222 >gi|300703492|ref|YP_003745094.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum CFBP2957] gi|299071155|emb|CBJ42469.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum CFBP2957] Length = 299 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 117/226 (51%), Gaps = 21/226 (9%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y GKR+RP+L A + E + ++CA+E IH +L+HDD+ LR Sbjct: 37 MRYATLGAGKRVRPLLVHAAGALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLR 96 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG+ + T++LVGD L +QAF ++ E + ++ +LV GEL + S S Sbjct: 97 RGRPTVHRAYDEATALLVGDALQTQAFVVLAELGAVSSVTRAALV------GELARASGS 150 Query: 152 ------KNLDVTE------EDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + +D+ +D L + + KT L A+L + +L AGV + + + +Y Sbjct: 151 LGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNATALEQVDAYA 210 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ+VDD+LD + +GK G+D + KPT IL +R Sbjct: 211 GAVGLAFQVVDDILDVTADTATLGKTAGKDEADDKPTYVSILGLER 256 >gi|207723747|ref|YP_002254145.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum MolK2] gi|206588951|emb|CAQ35913.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum MolK2] Length = 299 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 21/226 (9%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y GKR+RP+L A + E + ++CA+E IH +L+HDD+ LR Sbjct: 37 MRYATLGAGKRVRPLLVHAAGALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLR 96 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG+ + T++LVGD L +QAF ++ E L A+S V GEL + S S Sbjct: 97 RGRPTVHRAYDEATALLVGDALQTQAFVVLAE------LGAVSPVTRAALVGELARASGS 150 Query: 152 ------KNLDVTE------EDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + +D+ +D L + + KT L A+L + +L AGV + + + +Y Sbjct: 151 LGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNAAALEQVDTYA 210 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ+VDD+LD + +GK G+D + KPT IL +R Sbjct: 211 GAVGLAFQVVDDILDVTADTATLGKTAGKDEADDKPTYVSILGLER 256 >gi|300767239|ref|ZP_07077151.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300495058|gb|EFK30214.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 308 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 13/232 (5%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLL 80 + CSD + D ++Y + +GGKRLRP+LTLA + L A A+E +HT +L+ Sbjct: 38 QACSDQSTLTDAMRYSVLAGGKRLRPLLTLAILDTFDITTTAANLRASVAVELMHTYSLI 97 Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET---KSQEALEALSL 135 HDD+ +D+ LRRG+ + +G ++L GD L F + ++ S A + L+L Sbjct: 98 HDDLPAMDNDQLRRGEPTNHVKFGEDVAILAGDALQPLTFEWIADSGLPASIVANQTLAL 157 Query: 136 VACTLAEGELRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 T G + L ++L + LH + KT L A++ + A VQ +V Sbjct: 158 AQATGPRGMVAGQIADVLGAGQHLALPALQQLH--REKTGALIHYAVQAGLIQAQVQPAV 215 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++ L Y G+AFQ+ DD+LD ++GK +D K T P +L Sbjct: 216 QELLLQYADAYGLAFQIYDDILDVTSTPAQLGKATHKDADEHKNTYPGLLGL 267 >gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella henselae str. Houston-1] gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella henselae str. Houston-1] Length = 300 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 10/219 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ ++Y + +GGKRLRP L + + + + + + +A A+E IH +L+HDD+ + Sbjct: 36 EILLKAMRYGVLNGGKRLRPFLVIQSCALFDIPIEYSLNVASALECIHCYSLIHDDLPAM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE- 144 D+ LRRG+ + + T++L G+ LL+ AF ++ S+ + E + LA+ Sbjct: 96 DNDTLRRGQPTVHIAFDEATAILAGNALLTFAFEIIAHKTSELSFETRIRLITALAQASG 155 Query: 145 LRQLSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L + + LD+ E D + KTA L S A + ++I + + L ++ Sbjct: 156 LGGMIGGQMLDLEAEKKPQESKDITTLQHMKTATLISFACQAGAIIGNASQELTEKLAAF 215 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G LG+AFQL DD+LD +GK G+D K T Sbjct: 216 GTYLGLAFQLTDDLLDVTASTKVLGKTAGKDETAHKATF 254 >gi|332534969|ref|ZP_08410787.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332035587|gb|EGI72079.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 295 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 15/240 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVV 85 E + + +Y +F+GGKRLRP L AT ML + +LA AIE IH+ +L+H + Sbjct: 30 ETVKNATQYGLFNGGKRLRPFLVYATGKMLGANQQDLHVLAAAIECIHSYSLVHDDLPAM 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE- 144 DD LRRG+ + +G ++L GD L + AF ++ K + + + TLA Sbjct: 90 DDDDLRRGRPTCHIEFGEANAILAGDALQTLAFELIANHKFTCSSQTQVKMIATLAHASG 149 Query: 145 LRQLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS- 196 L + + LD+ D + + K KT L + A+ + +L + + + +Q L++ Sbjct: 150 LEGMVGGQGLDIAATDKVITVQELARIHKLKTGALINCAITLGALCS--EKADQQTLENL 207 Query: 197 --YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 +G +G+AFQ+ DD+LD G+ +GK G D K T P +L ++ +N + Sbjct: 208 SIFGYAIGLAFQVHDDILDVEGDTVTLGKPQGSDIAANKATYPALLGMLGAKEKAQNLIQ 267 >gi|71903832|ref|YP_280635.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180] gi|94994734|ref|YP_602832.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus pyogenes MGAS10750] gi|71802927|gb|AAX72280.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180] gi|94548242|gb|ABF38288.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus pyogenes MGAS10750] Length = 290 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 17/229 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + D + Y + SGGKR+RP++ L M+E G + H LA A+E IHT +L+HDD Sbjct: 24 EELIDAILYSVDSGGKRIRPLILLE---MIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ RRG++ +G T++L GD L F ++ + + ++ + +LA Sbjct: 81 LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLA 140 Query: 142 EGELRQLSLSKNLDVTEEDY------LHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G + + LD+ E+ L +I +KT L + + ++L+ +VRQ L Sbjct: 141 SGTFGMVG-GQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQL 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + GM +G AFQ+ DD+LD ++GK +D K T P +L + Sbjct: 200 EQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKATYPSLLGLE 248 >gi|260767267|ref|ZP_05876208.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio furnissii CIP 102972] gi|260617775|gb|EEX42953.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio furnissii CIP 102972] gi|315180898|gb|ADT87812.1| geranyltranstransferase [Vibrio furnissii NCTC 11218] Length = 294 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 124/252 (49%), Gaps = 12/252 (4%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L L R+ + + + ++Y + GGKR RP L T ML + A AIE IH Sbjct: 18 LWLNRLPNQNLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCEPSDLDTPASAIECIHAY 77 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 +L+HDD+ +DD LRRGK + + T++L GD L + AF ++ E +A E + Sbjct: 78 SLIHDDLPAMDDDELRRGKPTCHIKFDEATAILTGDALQTLAFTILAEGTLSDAGEMNRV 137 Query: 136 -VACTLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGV 186 + LAE Q + L + LD+ E+ L ++ ++KT L A+ + ++ AG Sbjct: 138 KMIQALAEASGAQGMCLGQALDLAAENRLVALDELENIHRNKTGALMRCAIRMGAMAAGH 197 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + V L Y +G+AFQ+ DD+LD + +GK G D + K T P +L + Sbjct: 198 KGLDVLPHLDRYADAVGLAFQVQDDILDIISDTETLGKPQGSDQQLNKSTYPALLGLEGA 257 Query: 246 TKREKNFWKSTI 257 + + ++ + Sbjct: 258 MNKAQLLYEEAL 269 >gi|312874544|ref|ZP_07734569.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b] gi|315653403|ref|ZP_07906325.1| geranyltranstransferase [Lactobacillus iners ATCC 55195] gi|311089935|gb|EFQ48354.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b] gi|315489328|gb|EFU78968.1| geranyltranstransferase [Lactobacillus iners ATCC 55195] Length = 288 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 127/244 (52%), Gaps = 12/244 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDS 88 +++ Y + +GGKRLRP+L LAT +L + + + +AC IE IHT +L+HDD+ +D+ Sbjct: 33 EIMSYSVLAGGKRLRPLLFLATLEILSHPISEKEIKIACGIELIHTYSLIHDDLPAMDND 92 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALS--LVACTLAEGEL 145 RRGK+ + WG ++L GD LL + E + S E ++ ++ + +A G+ Sbjct: 93 DYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSYELIKVITRAIGPNGMAGGQY 152 Query: 146 RQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + NL E ++ ++ KT L A++++++ A + V+ L + G Sbjct: 153 MDIDSTNNLSYKRNETFIDKMEFLKTGCLIVASVQMAAKYANSNDKVQMNLLHFAEAFGR 212 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 A+Q+ DD++D + GK +D NGK +L ++ + I GK++ Sbjct: 213 AYQIYDDIVDIMQTSVQAGKKTHKDADNGKNNTLTMLGLEKSQAELSDL----IARGKVA 268 Query: 264 VENL 267 ++++ Sbjct: 269 IKDM 272 >gi|56808396|ref|ZP_00366148.1| COG0142: Geranylgeranyl pyrophosphate synthase [Streptococcus pyogenes M49 591] Length = 290 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 17/229 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + D + Y + SGGKR+RP++ L M+E G + H LA A+E IHT +L+HDD Sbjct: 24 EELIDAILYSVDSGGKRIRPLILLE---MIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ RRG++ +G T++L GD L F ++ + + ++ + +LA Sbjct: 81 LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLA 140 Query: 142 EGELRQLSLSKNLDVTEEDY------LHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G + + LD+ E+ L +I +KT L + + ++L+ +VRQ L Sbjct: 141 SGTFGMVG-GQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQL 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + GM +G AFQ+ DD+LD ++GK +D K T P +L + Sbjct: 200 EQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKATYPSLLGLE 248 >gi|257885167|ref|ZP_05664820.1| polyprenyl synthetase [Enterococcus faecium 1,231,501] gi|257821019|gb|EEV48153.1| polyprenyl synthetase [Enterococcus faecium 1,231,501] Length = 296 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 13/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDS 88 D + Y + +GGKR+RP+L L + D V +A A+E +HT +L+HDD+ +D+ Sbjct: 33 DAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMDND 92 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLVACTLAEGEL 145 LRRGK V+G ++L GD LL+ AF M S + L L C ++G + Sbjct: 93 DLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGNSPKLLLLQQLAVCAGSQGMV 152 Query: 146 RQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + SK L + E ++H + KT L AL ++A + L+ + Sbjct: 153 AGQAADIEGESKKLSLEELAFIH--ERKTGHLIRYALLAGGILAKQPEEIILLLQRLAEH 210 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+AFQ+ DD+LD G +GK G+D R K T P +L ++ Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEK 254 >gi|293392564|ref|ZP_06636884.1| geranyltranstransferase [Serratia odorifera DSM 4582] gi|291424966|gb|EFE98175.1| geranyltranstransferase [Serratia odorifera DSM 4582] Length = 300 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 12/234 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +++ GGKRLRP L AT M +N + A AIE IH +L+HDD+ +D+ Sbjct: 35 EAMRHGALLGGKRLRPFLVYATGEMFGVSLNNLDVPAAAIECIHAYSLIHDDLPAMDNDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVACTLAEGELRQ 147 LRRG+ + +G ++L GD L + AF ++ + + + L++V+ + Sbjct: 95 LRRGQPTCHIKFGEANAILAGDALQTLAFSILADADMPDVALRDRLAMVSELAGASGVAG 154 Query: 148 LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E + + KT L AA+ + +L AG + L Y Sbjct: 155 MCGGQALDLAAEGRQINLEALEQIHRLKTGALIRAAVRLGALAAGEPGRAALVQLDRYAA 214 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 +G+AFQ+ DD+LD GE ++GK G D ++GK T P +L + + + Sbjct: 215 AIGLAFQVQDDILDVIGETAKIGKRQGADQQHGKSTYPALLGLENAKAKASDLH 268 >gi|209694502|ref|YP_002262430.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238] gi|208008453|emb|CAQ78619.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238] Length = 298 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 12/243 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 + + D +KY + GGKR RP L TA ML ++ A A+E IH+ +L+HDD+ + Sbjct: 32 QPLTDAMKYALLLGGKRARPYLVYITANMLGIDSEHADAPAAAVECIHSYSLIHDDLPAM 91 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEG 143 D+ LRRG + + T++L GD L + AF ++ E E+ + ++ Sbjct: 92 DNDDLRRGHATCHIKFDEATAILAGDALQTLAFEILANGTLAEEAESSRIDMIRVLSKAS 151 Query: 144 ELRQLSLSKNLDVTEE----DYL---HVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALK 195 + + ++LD+ E D L + +KT L +A+++ +L AG + + L+ Sbjct: 152 GASGMCMGQSLDLQAEGKQVDLLSLEQIHANKTGALMKSAIQLGALCAGEKGKQILPQLE 211 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y +G+AFQ+ DD+LD + +GK G D K T P +L + + +++ Sbjct: 212 KYADAIGLAFQVQDDILDITSDTETLGKPQGSDIALEKSTYPALLGLDGAKLKAEQLYQT 271 Query: 256 TIN 258 I Sbjct: 272 AIT 274 >gi|86147429|ref|ZP_01065741.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222] gi|85834722|gb|EAQ52868.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222] Length = 294 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 13/261 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++ E++N L L R+ + + + ++Y + GGKR RP L T ML + A Sbjct: 11 RNNEQLN-LWLDRLPHQNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPAS 69 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---- 123 AIE IH +L+HDD+ +DD LRRG + + T++L GD L + AF ++ E Sbjct: 70 AIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILTGDALQTLAFTILAEGTLS 129 Query: 124 --TKSQEALEALSLVACTLAEGELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +S L + A+G +L ++N VT E+ V ++KT L +A+ Sbjct: 130 ADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKTGALMKSAIR 189 Query: 179 VSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +L AG + V L Y +G+AFQ+ DD+LD + +GK G D K T P Sbjct: 190 LGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYP 249 Query: 238 VILAFQRGTKREKNFWKSTIN 258 +L + ++ + + + Sbjct: 250 SLLGLEGAQEKAQTLLQEALQ 270 >gi|69244725|ref|ZP_00602989.1| Polyprenyl synthetase [Enterococcus faecium DO] gi|257879355|ref|ZP_05659008.1| polyprenyl synthetase [Enterococcus faecium 1,230,933] gi|257881779|ref|ZP_05661432.1| polyprenyl synthetase [Enterococcus faecium 1,231,502] gi|257890181|ref|ZP_05669834.1| polyprenyl synthetase [Enterococcus faecium 1,231,410] gi|257893509|ref|ZP_05673162.1| polyprenyl synthetase [Enterococcus faecium 1,231,408] gi|258615761|ref|ZP_05713531.1| geranyltranstransferase [Enterococcus faecium DO] gi|260558797|ref|ZP_05830986.1| polyprenyl synthetase [Enterococcus faecium C68] gi|261206507|ref|ZP_05921207.1| polyprenyl synthetase [Enterococcus faecium TC 6] gi|289565417|ref|ZP_06445866.1| polyprenyl synthetase [Enterococcus faecium D344SRF] gi|293553173|ref|ZP_06673810.1| geranyltranstransferase [Enterococcus faecium E1039] gi|293560486|ref|ZP_06676978.1| geranyltranstransferase [Enterococcus faecium E1162] gi|293568312|ref|ZP_06679636.1| geranyltranstransferase [Enterococcus faecium E1071] gi|294614724|ref|ZP_06694626.1| geranyltranstransferase [Enterococcus faecium E1636] gi|294618979|ref|ZP_06698474.1| geranyltranstransferase [Enterococcus faecium E1679] gi|294621591|ref|ZP_06700756.1| geranyltranstransferase [Enterococcus faecium U0317] gi|314937883|ref|ZP_07845199.1| geranyltranstransferase [Enterococcus faecium TX0133a04] gi|314941374|ref|ZP_07848267.1| geranyltranstransferase [Enterococcus faecium TX0133C] gi|314950133|ref|ZP_07853419.1| geranyltranstransferase [Enterococcus faecium TX0082] gi|314951326|ref|ZP_07854380.1| geranyltranstransferase [Enterococcus faecium TX0133A] gi|314992843|ref|ZP_07858244.1| geranyltranstransferase [Enterococcus faecium TX0133B] gi|314998047|ref|ZP_07862935.1| geranyltranstransferase [Enterococcus faecium TX0133a01] gi|68196316|gb|EAN10745.1| Polyprenyl synthetase [Enterococcus faecium DO] gi|257813583|gb|EEV42341.1| polyprenyl synthetase [Enterococcus faecium 1,230,933] gi|257817437|gb|EEV44765.1| polyprenyl synthetase [Enterococcus faecium 1,231,502] gi|257826541|gb|EEV53167.1| polyprenyl synthetase [Enterococcus faecium 1,231,410] gi|257829888|gb|EEV56495.1| polyprenyl synthetase [Enterococcus faecium 1,231,408] gi|260075256|gb|EEW63569.1| polyprenyl synthetase [Enterococcus faecium C68] gi|260079217|gb|EEW66908.1| polyprenyl synthetase [Enterococcus faecium TC 6] gi|289162746|gb|EFD10597.1| polyprenyl synthetase [Enterococcus faecium D344SRF] gi|291589024|gb|EFF20848.1| geranyltranstransferase [Enterococcus faecium E1071] gi|291592462|gb|EFF24069.1| geranyltranstransferase [Enterococcus faecium E1636] gi|291594640|gb|EFF26022.1| geranyltranstransferase [Enterococcus faecium E1679] gi|291598756|gb|EFF29808.1| geranyltranstransferase [Enterococcus faecium U0317] gi|291602583|gb|EFF32798.1| geranyltranstransferase [Enterococcus faecium E1039] gi|291605634|gb|EFF35076.1| geranyltranstransferase [Enterococcus faecium E1162] gi|313587889|gb|EFR66734.1| geranyltranstransferase [Enterococcus faecium TX0133a01] gi|313592647|gb|EFR71492.1| geranyltranstransferase [Enterococcus faecium TX0133B] gi|313596543|gb|EFR75388.1| geranyltranstransferase [Enterococcus faecium TX0133A] gi|313599797|gb|EFR78640.1| geranyltranstransferase [Enterococcus faecium TX0133C] gi|313642741|gb|EFS07321.1| geranyltranstransferase [Enterococcus faecium TX0133a04] gi|313643574|gb|EFS08154.1| geranyltranstransferase [Enterococcus faecium TX0082] Length = 296 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 13/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDS 88 D + Y + +GGKR+RP+L L + D V +A A+E +HT +L+HDD+ +D+ Sbjct: 33 DAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMDND 92 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLVACTLAEGEL 145 LRRGK V+G ++L GD LL+ AF M S + L L C ++G + Sbjct: 93 DLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGNSPKLLLLQQLAVCAGSQGMV 152 Query: 146 RQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + SK L + E ++H + KT L AL ++A + L+ + Sbjct: 153 AGQAADIEGESKKLSLEELAFIH--ERKTGHLIRYALLAGGILAKQPEEILLLLQRLAEH 210 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+AFQ+ DD+LD G +GK G+D R K T P +L ++ Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEK 254 >gi|108757727|ref|YP_631865.1| polyprenyl synthase family protein [Myxococcus xanthus DK 1622] gi|108461607|gb|ABF86792.1| polyprenyl synthase family protein [Myxococcus xanthus DK 1622] Length = 332 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 4/205 (1%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 SG KR RPML + + V +A A E IH+A+LLHDDVVD RRG+ Sbjct: 47 SGSKRARPMLARLFGGAVGVPAERLVDVAVAAELIHSASLLHDDVVDAGMFRRGRPTVNA 106 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 WGN +V+ GD +LS + + ++ ALS+V+ + + ++ +LD+ Sbjct: 107 RWGNIVAVMSGDLILSTGLFQLSQLDARLTRSALSVVS-EMTRAAIAEVEARGDLDLPLN 165 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 + + KT LF ++ +A +V + +G +LG+AFQ+ DD+ D G Sbjct: 166 RLRFIAEGKTGSLFGWCGNAAATLAEHPEAVER-FDGFGRHLGVAFQIADDIRDILG--T 222 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQR 244 ++GK D + P++P++LA + Sbjct: 223 DVGKPRYADVHSRTPSMPILLAVAK 247 >gi|57239293|ref|YP_180429.1| putative geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden] gi|58579257|ref|YP_197469.1| putative geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden] gi|57161372|emb|CAH58295.1| putative geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden] gi|58417883|emb|CAI27087.1| Possible geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden] Length = 276 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 109/195 (55%), Gaps = 24/195 (12%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 +KY +F+ GK +RP L A+A + D + ++ AIE IH +L+HDD+ +D+ R Sbjct: 37 MKYSLFTPGKYIRPFLVNASAQIFNVNIDRTLPVSVAIELIHVYSLIHDDLPGMDNEDTR 96 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF-------------CMVIETKSQEALEALSLVAC 138 RG++++ + ++L GD LL+ AF C +I+ +Q A+ ++ Sbjct: 97 RGQLSSHKKFTEAIAILTGDALLTLAFEVLSTINESPYIRCRIIQVLTQ-AIGYQGMIKG 155 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + E +++K D+ + +H +K TA LFSAA EV ++ G ++ +LK+YG Sbjct: 156 QVLDTE----TIAK--DINDIKTMHTLK--TACLFSAACEVGGILGGASDTELNSLKNYG 207 Query: 199 MNLGIAFQLVDDVLD 213 +NLG AFQ+ DD+ D Sbjct: 208 LNLGFAFQIKDDIAD 222 >gi|284044529|ref|YP_003394869.1| polyprenyl synthetase [Conexibacter woesei DSM 14684] gi|283948750|gb|ADB51494.1| Polyprenyl synthetase [Conexibacter woesei DSM 14684] Length = 296 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 114/215 (53%), Gaps = 13/215 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSA 89 + ++Y + +GGKR+RP+L LATA +E + +A A+E IHT +L+H +DD Sbjct: 36 EAMRYSLLAGGKRIRPVLALATARAIERDPAEALPIAAALELIHTYSLIHDDLPAMDDDD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG+ +G ++L GD L ++AF V+E ++ E L+ V + + + Sbjct: 96 LRRGRPTCHKAFGENVAILAGDGLYAEAFRHVLERQAGEPAAILAAVRELASATGVNGMV 155 Query: 150 LSKNLDVTEED--------YLHVIKSKTAVLFSAALEVSSLIAGVQ-NSVRQALKSYGMN 200 + LDVT+ +LH + KT L A++ L+A Q + + +S+ Sbjct: 156 GGQYLDVTDSAPRDAAGLRHLHSL--KTGRLIGASIMCPLLLAPDQPRATIDSFRSFASE 213 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 LG+ FQ+VDD+LD G + +GK G D R GK T Sbjct: 214 LGVLFQIVDDILDVVGTDDALGKTQGSDERLGKRT 248 >gi|319425679|gb|ADV53753.1| Polyprenyl synthetase [Shewanella putrefaciens 200] Length = 293 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 14/223 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y GGKR+RP L + M + A AIE IH +L+HDD+ +DD AL Sbjct: 34 AMQYGALLGGKRIRPFLVYSVGQMFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT-----LA 141 RRG+ + + T++L GD L + AF +V E S++ + + +A + Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMC 153 Query: 142 EGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ L S K +D+ LH +K T L S A+E++ + A Q + ++ Sbjct: 154 GGQAIDLASTDKQIDLKALTQLHNMK--TGALISCAVELALIAANAPKDQYQTMMTFAHA 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+ DD+LD E+GK G D + K T P +L Q Sbjct: 212 VGLAFQVQDDILDIIATTEELGKPQGSDTESNKSTFPQLLGLQ 254 >gi|258542579|ref|YP_003188012.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256633657|dbj|BAH99632.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256636716|dbj|BAI02685.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-03] gi|256639769|dbj|BAI05731.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-07] gi|256642825|dbj|BAI08780.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-22] gi|256645880|dbj|BAI11828.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-26] gi|256648933|dbj|BAI14874.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-32] gi|256651920|dbj|BAI17854.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654977|dbj|BAI20904.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-12] Length = 312 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 28/253 (11%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 ++ L+ D +I + ++Y GGKRLR L + TA + +A ++E + Sbjct: 36 IDTLLPLTTGGDARLI-EAMRYATLGGGKRLRGYLAIVTASLFGVPESQSARVAASVEML 94 Query: 75 HTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ----- 127 H +L+HDD+ +RRG+ + + T++L GD L ++AF ++ +++ Sbjct: 95 HAYSLVHDDLPAMDDDDMRRGQPSTHRQFDEATAILAGDALQTKAFEILAASQTHTDANV 154 Query: 128 ---------EALEALSLVACTL--AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 EA A +V + EGE R L L E +LH +K+ + +SA Sbjct: 155 RIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLE------EVRHLHALKTGCLIRYSA- 207 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 E +++ +R+ L+SYG N+G AFQ+ DDVLD E+GK G+D +GK T Sbjct: 208 -ESGAILGQASPDLRRRLRSYGANIGAAFQIADDVLDATATAEELGKTAGKDEASGKSTF 266 Query: 237 PVILAFQRGTKRE 249 +L + G K E Sbjct: 267 VALLGIE-GAKAE 278 >gi|114569399|ref|YP_756079.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10] gi|114339861|gb|ABI65141.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10] Length = 295 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 120/232 (51%), Gaps = 14/232 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GKRLRP LT+ ++ + ACA+E IH +L+HDD+ + Sbjct: 36 AMRYAALGPGKRLRPFLTIEAGHLVHADERGVLRAACALECIHAYSLIHDDLPCMDDDDM 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-------LEALSLVACT--LA 141 RRG+ + T+VL GD L S A+ ++ + + +E LS + + Sbjct: 96 RRGRPTVHKAYDEATAVLAGDGLQSIAYEILAHPDTHQRGSVRARLVERLSRASGPYGMV 155 Query: 142 EGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ + + ++ D++ +H + KT L S A+E ++++ V + VR+AL+ + + Sbjct: 156 GGQMIDIRAETEQFDISVVTRMH--RMKTGALISYAVEAATILKDVDDPVRRALEGFAHD 213 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 LG+A+Q+ DD+LD G+ +E GK +G+D GK T IL + R ++ Sbjct: 214 LGLAYQITDDLLDATGDEDEAGKAVGKDAGQGKATFVTILGIEGARDRSRHL 265 >gi|94990756|ref|YP_598856.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus pyogenes MGAS10270] gi|94544264|gb|ABF34312.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus pyogenes MGAS10270] Length = 290 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 17/229 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + D + Y + SGGKR+RP++ L M+E G + H LA A+E IHT +L+HDD Sbjct: 24 EELIDAILYSVDSGGKRIRPLILLE---MIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ RRG++ +G T++L GD L F ++ + + ++ + +LA Sbjct: 81 LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLA 140 Query: 142 EGELRQLSLSKNLDVTEEDY------LHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G + + LD+ E+ L +I +KT L + + ++L+ +VRQ L Sbjct: 141 SGTFGMVG-GQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQL 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + GM +G AFQ+ DD+LD ++GK +D K T P +L + Sbjct: 200 EQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKATYPSLLGLE 248 >gi|319407760|emb|CBI81407.1| geranyltranstransferase [Bartonella sp. 1-1C] Length = 300 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 114/219 (52%), Gaps = 10/219 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 EM+ + +++ + +GGKRLRP L + +A + + ++ + + A+E IH +L+HDD+ + Sbjct: 36 EMLINAMRHGVLNGGKRLRPFLVIQSAALFDIPPEDSLDIGVALECIHCYSLIHDDLPAL 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVACTLAEGE 144 D+ LRRG+ + + T++L G+ LL+ AF ++ +T S + L+ Sbjct: 96 DNDTLRRGQPTVHIAFDEATAILAGNALLTFAFEIIAHKTCSFSPKTKIELITALTQAAG 155 Query: 145 LRQLSLSKNLDVTEEDYLH-------VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L + + LD+ E H + + KTA L A + +++ ++ L S+ Sbjct: 156 LGGMIGGQLLDLEAEKKPHNENATTTLQQMKTAALIRFACQAGAIMGRASKTLTHQLASF 215 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G ++G+AFQL DD+LD +GK G+D K TL Sbjct: 216 GTHIGLAFQLTDDLLDLTSHTKILGKTAGKDQIANKATL 254 >gi|295093395|emb|CBK82486.1| Geranylgeranyl pyrophosphate synthase [Coprococcus sp. ART55/1] Length = 294 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 120/222 (54%), Gaps = 17/222 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV--VDD 87 + + Y + +GGKRLRPML T + + G + V+ AIE IHT +L+HDD+ +D+ Sbjct: 33 EAMAYSVEAGGKRLRPMLMEETYRL--FGGKSEVIKPFMAAIEMIHTYSLIHDDLPALDN 90 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLVACTLAE---- 142 RRG+ + +V+G ++L GD LL+ A+ + E + A++ C LA+ Sbjct: 91 DDYRRGRKTSHVVFGEAMAILAGDALLNYAYETACKAFGMGEDIHAVASAMCVLAQKPGI 150 Query: 143 -----GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G++ + ++ ++++E +V ++KT L A++ + +++AG + A+ Sbjct: 151 NGMIGGQVVDVEMTGK-ELSKEQLEYVYENKTGALIEASMMIGAILAGADEAKVAAVHKI 209 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++G+AFQ+ DD+LD G+ +GK D NGK T I Sbjct: 210 ASDVGMAFQIQDDILDVCGDSALLGKPTLSDEENGKVTYVTI 251 >gi|312871899|ref|ZP_07731983.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a] gi|312872399|ref|ZP_07732468.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1] gi|311091981|gb|EFQ50356.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1] gi|311092621|gb|EFQ50981.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a] Length = 288 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 127/244 (52%), Gaps = 12/244 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDS 88 +++ Y + +GGKRLRP+L LAT +L + + + +AC IE IHT +L+HDD+ +D+ Sbjct: 33 EIMSYSVLAGGKRLRPLLFLATLEILSHPISEKEIKIACGIELIHTYSLIHDDLPAMDND 92 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALS--LVACTLAEGEL 145 RRGK+ + WG ++L GD LL + E + S E ++ ++ + +A G+ Sbjct: 93 DYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSYELIKVITRAIGPNGMAGGQY 152 Query: 146 RQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + NL E ++ ++ KT L A++++++ A + V+ L + G Sbjct: 153 MDIDSTNNLSYKRNETFIDKMEFLKTGCLIVASVQMAAKYANSSDKVQMNLLHFAEAFGR 212 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 A+Q+ DD++D + GK +D NGK +L ++ + I GK++ Sbjct: 213 AYQIYDDIVDIMQTSVQAGKKTHKDADNGKNNTLTMLGLEKSQAELSDL----IARGKVA 268 Query: 264 VENL 267 ++++ Sbjct: 269 IKDM 272 >gi|308180453|ref|YP_003924581.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045944|gb|ADN98487.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 296 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 13/232 (5%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLL 80 + CSD + D ++Y + +GGKRLRP+LTLA + L A A+E +HT +L+ Sbjct: 26 QACSDQSTLTDAMRYSVLAGGKRLRPLLTLAILDTFDITTTAANLRASVAVELMHTYSLI 85 Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET---KSQEALEALSL 135 HDD+ +D+ LRRG+ + +G ++L GD L F + ++ S A + L+L Sbjct: 86 HDDLPAMDNDQLRRGEPTNHVKFGEDVAILAGDALQPLTFEWIADSGLPASIVANQTLAL 145 Query: 136 VACTLAEGELRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 T G + L ++L + LH + KT L A++ + A VQ +V Sbjct: 146 AQATGPRGMVAGQIADVLGAGQHLALPALQQLH--REKTGALIHYAVQAGLIQAQVQPAV 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++ L Y G+AFQ+ DD+LD ++GK +D K T P +L Sbjct: 204 QELLLQYADAYGLAFQIYDDILDVTSTPAQLGKATHKDADEHKNTYPGLLGL 255 >gi|325830170|ref|ZP_08163627.1| polyprenyl synthetase [Eggerthella sp. HGA1] gi|325487637|gb|EGC90075.1| polyprenyl synthetase [Eggerthella sp. HGA1] Length = 349 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 121/247 (48%), Gaps = 12/247 (4%) Query: 15 VNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 VN I K +D++ + D + +GGKR RP++ A + A AIE Sbjct: 33 VNSFIPKGTHADMDRYLYDPLISYSQNGGKRHRPLICFAACRAVGGDMARATSAAAAIEH 92 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE----- 128 HTA L+HDD+ D++ LRRG+ L G ++ GD LS V+ KS + Sbjct: 93 FHTAALIHDDIADEAELRRGEPCMHLTEGMGLAINAGDLALSLVNGTVVSDKSLDDATKV 152 Query: 129 --ALEALSLVACTLAEGELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFSA-ALEVSSLI 183 E + + T+ EG+ + +++ D+T EDYL + KTA A L + ++I Sbjct: 153 RVITELIDMTRRTI-EGQALDIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAII 211 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G +AL++YG++ G+AFQ+ DD+L+ G K+ D GK TL V+ A Q Sbjct: 212 GGGTEIEIEALRNYGLDTGLAFQIQDDLLNLVGSEESTKKDFRNDITEGKRTLMVVHALQ 271 Query: 244 RGTKREK 250 R++ Sbjct: 272 HSDDRDR 278 >gi|170730756|ref|YP_001776189.1| geranyltranstransferase [Xylella fastidiosa M12] gi|167965549|gb|ACA12559.1| geranyltranstransferase [Xylella fastidiosa M12] Length = 291 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 16/223 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + SGGKR+RP+L A + + A A+E IH +L+HDD+ +DD L Sbjct: 34 AMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------- 143 RRG+ + + T++L GD L + AF + + + +L L T A G Sbjct: 94 RRGRPTVHIAFDEATAILTGDALQTLAFECLADAPADASLRIAWLQTLTHAAGVAGMCGG 153 Query: 144 ---ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 ++ S+ L E +H +KS T L AA+ + +L +L ++ Sbjct: 154 QALDIDATGQSQTLKALEA--MHALKSGT--LMRAAVRMGALAGDPSPEDLHSLDTFAAT 209 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+AFQ+ DD+LD ++GK G+D K T P +L+ + Sbjct: 210 LGLAFQVRDDILDIESSSEQLGKTTGKDAIQQKSTFPALLSVE 252 >gi|226329091|ref|ZP_03804609.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198] gi|225202277|gb|EEG84631.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198] Length = 310 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 20/242 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 + Y GGKRLRP L A M + N A AIE IH +L+HDD+ L Sbjct: 43 AMHYGALLGGKRLRPFLVYAVGEMFKVPALNLDAPAAAIECIHAYSLIHDDLPAMDDDDL 102 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQL 148 RRGK + +G ++L GD L + AF ++ + + + ++++A L + Sbjct: 103 RRGKPTCHIEFGEANAILAGDALQALAFEILAKNPMPDVAITDRVAMIAELATASGLAGM 162 Query: 149 SLSKNLDVTEED-----------YLHVIKSKTAVLFSAALEVSSLIAGVQ-NSVRQALKS 196 + LD+ ED +LH KT L AA+ + + AG + + V AL Sbjct: 163 CGGQALDLEAEDKSIDLASLEKIHLH----KTGALIRAAVRLGAFSAGSKGHDVLPALDK 218 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y ++G+AFQ+ DD+LD G E GK G D +GK T P +L ++ K+ + + Sbjct: 219 YAHSIGLAFQVQDDILDVIGSTEETGKRQGSDQESGKSTYPALLGLEQAQKKAQELYNEA 278 Query: 257 IN 258 ++ Sbjct: 279 LD 280 >gi|71274508|ref|ZP_00650796.1| Polyprenyl synthetase [Xylella fastidiosa Dixon] gi|71900337|ref|ZP_00682472.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1] gi|71164240|gb|EAO13954.1| Polyprenyl synthetase [Xylella fastidiosa Dixon] gi|71729912|gb|EAO32008.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1] Length = 291 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 20/240 (8%) Query: 20 LKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L+R S + P ++Y + SGGKR+RP+L A + + A A+E IH Sbjct: 17 LERTLSILTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLLDVPAAAVELIH 76 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +L+HDD+ +DD LRRG+ + + T++L GD L + AF + + + +L Sbjct: 77 AYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLADAPADASLRIA 136 Query: 134 SLVACTLAEG----------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 L T A G ++ S+ L E +H +KS T L AA+ + +L Sbjct: 137 WLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEA--MHALKSGT--LMRAAVRMGALA 192 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +L ++ LG+AFQ+ DD+LD ++GK G+D K T P +L+ + Sbjct: 193 GDPSPEDLHSLDTFAATLGLAFQVRDDILDIESSSEQLGKTTGKDAIQQKSTFPALLSVE 252 >gi|330445276|ref|ZP_08308928.1| geranyltranstransferase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489467|dbj|GAA03425.1| geranyltranstransferase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 300 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 12/238 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y GGKR RP LT T ML D+ A A+E IH +L+HDD+ +DD AL Sbjct: 39 AMQYGTLLGGKRARPFLTYVTGEMLGVTQDDLDTPAAAVECIHAYSLIHDDLPAMDDDAL 98 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEA-LEALSLVACTLAEGELRQL 148 RRG+ + + T++L GD L + AF ++ + SQ+ + +++V+ + Sbjct: 99 RRGQPTCHIAFDEATAILAGDALQTLAFEILANGQLSQDGNTQRIAMVSELAKASGAAGM 158 Query: 149 SLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMN 200 L + LD+ E + L +I + KT L A+ + +L AG + ++ L Y Sbjct: 159 CLGQTLDLEAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAAGEKGIAILPQLDKYAEA 218 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L ++ + ++ + Sbjct: 219 IGLAFQVQDDILDVISDTETLGKPQGSDLELDKSTYPALLGLDGAQEKAQLLYQEALQ 276 >gi|329115335|ref|ZP_08244089.1| Geranyltranstransferase [Acetobacter pomorum DM001] gi|326695314|gb|EGE47001.1| Geranyltranstransferase [Acetobacter pomorum DM001] Length = 312 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 27/247 (10%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 ++ L+ D +I + ++Y GGKRLR L + TA + +A ++E + Sbjct: 36 IDTLLPLTTGGDARLI-EAMRYATLGGGKRLRGYLAIVTASLFGVPESQSARVAASVEML 94 Query: 75 HTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ----- 127 H +L+HDD+ +RRG+ + + T++L GD L ++AF ++ +++ Sbjct: 95 HAYSLVHDDLPAMDDDDMRRGQPSTHRKFDEATAILAGDALQTKAFEILAASQTHADANV 154 Query: 128 ---------EALEALSLVACTL--AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 EA A +V + EGE R L L+ E +LH +K+ + +SA Sbjct: 155 RIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLA------EVRHLHALKTGCLIRYSA- 207 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 E +++ ++R+ L+SYG N+G AFQ+ DDVLD E+GK G+D +GK T Sbjct: 208 -ESGAILGQASPNLRRRLRSYGANIGAAFQIADDVLDATATAEELGKTAGKDEASGKSTF 266 Query: 237 PVILAFQ 243 +L + Sbjct: 267 VALLGIE 273 >gi|182418006|ref|ZP_02949312.1| geranyltranstransferase [Clostridium butyricum 5521] gi|237668434|ref|ZP_04528418.1| putative geranyltranstransferase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378177|gb|EDT75712.1| geranyltranstransferase [Clostridium butyricum 5521] gi|237656782|gb|EEP54338.1| putative geranyltranstransferase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 288 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 117/228 (51%), Gaps = 13/228 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 ++I D Y I GGKR+RP+L + + + N + +AC+IE IHT +L+HDD+ Sbjct: 25 KVIYDASGYSINIGGKRIRPILFALSYYIYKNEYKNILPMACSIEMIHTYSLIHDDLPCM 84 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL----SLVACTLA 141 LRRGK V+G +VL GD LL++A ++++ + +L + + A Sbjct: 85 DDDDLRRGKPTNHKVFGENIAVLAGDNLLNEAMILMMDYSLKNGGNSLKAAYEIASSAGA 144 Query: 142 EGELRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 EG + +S K + E +Y+H KT L A++ +++AG S + L++ Sbjct: 145 EGMIGGQVVDVISEGKKISKDELEYMHA--KKTGALIRASIVGGAVLAGACESDVKILRT 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 YG LG+ FQ+ DD+LD G+ + +GKN D + K + + Sbjct: 203 YGEKLGLVFQIKDDILDVVGDADVLGKNTHADEEHDKTNFISVYGLDK 250 >gi|28378303|ref|NP_785195.1| geranyltranstransferase [Lactobacillus plantarum WCFS1] gi|254556510|ref|YP_003062927.1| geranyltranstransferase [Lactobacillus plantarum JDM1] gi|28271138|emb|CAD64043.1| geranyltranstransferase [Lactobacillus plantarum WCFS1] gi|254045437|gb|ACT62230.1| geranyltranstransferase [Lactobacillus plantarum JDM1] Length = 296 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 13/232 (5%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLL 80 + CSD + D ++Y + +GGKRLRP+LTLA + L A A+E +HT +L+ Sbjct: 26 QACSDQSTLTDAMRYSVLAGGKRLRPLLTLAILDTFDITTTAANLRASVAVELMHTYSLI 85 Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET---KSQEALEALSL 135 HDD+ +D+ LRRG+ + +G ++L GD L F + ++ S A + L+L Sbjct: 86 HDDLPAMDNDQLRRGEPTNHVKFGEDVAILAGDALQPLTFEWIADSGLPASIVANQTLAL 145 Query: 136 VACTLAEGELRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 T G + L ++L + LH + KT L A++ + A VQ +V Sbjct: 146 AQATGPRGMVAGQVADVLGAGQHLALPALQQLH--REKTGALIHYAVQAGLIQAQVQPTV 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++ L Y G+AFQ+ DD+LD ++GK +D K T P +L Sbjct: 204 QELLLQYADAYGLAFQIYDDILDVTSTPAQLGKATHKDADEHKNTYPGLLGL 255 >gi|94988855|ref|YP_596956.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429] gi|94992746|ref|YP_600845.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus pyogenes MGAS2096] gi|94542363|gb|ABF32412.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429] gi|94546254|gb|ABF36301.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus pyogenes MGAS2096] Length = 290 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 17/229 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + D + Y + SGGKR+RP++ L M+E G + H LA A+E IHT +L+HDD Sbjct: 24 EELIDAILYSVDSGGKRIRPLILLE---MIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ RRG++ +G T++L GD L F ++ + + ++ + +LA Sbjct: 81 LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLA 140 Query: 142 EGELRQLSLSKNLDVTEEDY------LHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G + + LD+ E+ L +I +KT L + + ++L+ +VRQ L Sbjct: 141 SGTFGMVG-GQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQL 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + GM +G AFQ+ DD+LD ++GK +D K T P +L + Sbjct: 200 EQAGMLIGHAFQIRDDILDVTASFEDLGKTPKKDLFAEKATYPSLLGLE 248 >gi|330821215|ref|YP_004350077.1| Polyprenyl synthetase [Burkholderia gladioli BSR3] gi|327373210|gb|AEA64565.1| Polyprenyl synthetase [Burkholderia gladioli BSR3] Length = 294 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 14/223 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + + A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVMGGGKRVRPLLCHAAGELTGATEAARNAASAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLA 141 LRRGK + + T++LVGD L SQAF + + + A++ +LV + +A Sbjct: 94 LRRGKPTVHIQYDEPTALLVGDALQSQAFVALTDAAALTAVQQAALVRELALASGSVGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS--VRQALKSYGM 199 G+ L+ S L +T E + + KT L AA+ + +L AG S +AL Y Sbjct: 154 GGQAIDLA-SVGLMLTREQLETMHRKKTGALLRAAVRMGAL-AGETPSDDTMRALDVYAD 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D KPT I+ Sbjct: 212 AIGLAFQVVDDILDVTTDSATLGKTAGKDAAANKPTYVSIIGL 254 >gi|312112946|ref|YP_004010542.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311218075|gb|ADP69443.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 308 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 130/231 (56%), Gaps = 12/231 (5%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L R+ ++ + +++ + + KR+R +LTL A L R + + LACA+E IHT++L Sbjct: 22 LVRLDGPLDPLQGSLRHSLLAPAKRVRAVLTLVAARELGGRESDALDLACAVEMIHTSSL 81 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET---KSQEALEALS 134 + DD+ +D++A RRG + V+G T++L L+++A+ + + + + EA+ Sbjct: 82 ILDDLPCMDNAATRRGIPSNHRVFGEATAILASIGLMNRAYGVAAASAKLSADQRAEAVG 141 Query: 135 LVACTLA-EGELR--QLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSV 190 ++ ++ EG +R L+ E L + + KT LF+AA E +++A Q + Sbjct: 142 VLEWSVGLEGLVRGQHDDLADYRATMNEAQLETMYAQKTGALFAAAAECGAIVANNQ-AA 200 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 R A++ +G++LG+ FQ++DDVLD + GK+ +D +G+ T P +L Sbjct: 201 RPAMRKFGLDLGVGFQILDDVLDAHATSDRAGKDTSKD--SGRTTFPSLLG 249 >gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group] Length = 314 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 16/231 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + +GGKR+RP+L LA ++ +ACA+E IHT +L+HDD+ + Sbjct: 47 ERLCESMRYSVLAGGKRVRPVLALAACELVGGDAAAATPVACAVEMIHTMSLIHDDMPCM 106 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKSQEALEALSLVACT 139 DD ALRRG+ + + +G T++L GD L + AF C + L A++ + Sbjct: 107 DDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADRTLRAVAELGSA 166 Query: 140 LAEGELRQLSL----SKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 G + + S+ L V+ +Y+HV KTA L AA +++ G ++ + Sbjct: 167 SGTGGVAAGQVADKESEGLPVSLAMLEYIHV--HKTARLLEAAAVSGAIVGGGADAEVER 224 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 ++ Y +G+ FQ+VDDVLD ++GK G+D K T P +L + Sbjct: 225 VRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDVEADKATYPKLLGVDK 275 >gi|225351338|ref|ZP_03742361.1| hypothetical protein BIFPSEUDO_02931 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157682|gb|EEG70965.1| hypothetical protein BIFPSEUDO_02931 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 364 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 95/322 (29%), Positives = 159/322 (49%), Gaps = 37/322 (11%) Query: 23 ICSDVEMIPDVV-KYLIFS--GGKRLRPMLTL------ATALMLEYRGDNHVLLACAIEF 73 + S I D+V K + S GGKRLR +LTL A+ + E D + LACA+E Sbjct: 30 VASSCRPIADMVAKQAVTSSEGGKRLRSLLTLDSFRAFASEDVRERDFDALLDLACAVEV 89 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDFLLSQAFCMVIE- 123 T L+HDD++DDS LRRGK +A + G+ +++GD L + + + + Sbjct: 90 FQTGALVHDDIIDDSDLRRGKPSAHRAFSTGTHSEAIGHGLGIMLGDMLATASVDIADKA 149 Query: 124 ----TKSQEALEALSLVACTLAEGELRQLSLSKN-LDVTE---EDYLHVIKSKTAVLFS- 174 T + + AL + + G++ L++ N LD + E L+V + KTA + Sbjct: 150 ASKLTHGSDVVAALLNMHREVEVGQVLDLAVELNPLDDPDELVEASLNVFRWKTASYTTI 209 Query: 175 AALEVSSLIAGV-QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 A LE L AG+ ++ R+ + G+ LG+AFQL DD+LD G + GK +G D R GK Sbjct: 210 APLEFGMLAAGIGKDDARKQALAVGLPLGLAFQLADDLLDVVGSSSNTGKPVGGDIREGK 269 Query: 234 PTLPVILAFQRGTKREK----NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289 T+ + A ++ + W++ D + S +K+A + + A+ + R Sbjct: 270 RTVLLADAINAANDTQRRELIDMWEA---DSR-SETQVKRAIELFEQTGAIERSRGRIAD 325 Query: 290 YGQKAKDSLRCLPDSSWKKSLM 311 ++K ++ L S + +SL+ Sbjct: 326 LWNESKTAIETLSLSEYHESLL 347 >gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group] gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa Japonica Group] gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa Japonica Group] gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group] Length = 376 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 16/231 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + ++Y + +GGKR+RP+L LA ++ +ACA+E IHT +L+HDD+ + Sbjct: 109 ERLCESMRYSVLAGGKRVRPVLALAACELVGGDAAAATPVACAVEMIHTMSLIHDDMPCM 168 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKSQEALEALSLVACT 139 DD ALRRG+ + + +G T++L GD L + AF C + L A++ + Sbjct: 169 DDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADRTLRAVAELGSA 228 Query: 140 LAEGELRQLSL----SKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 G + + S+ L V+ +Y+HV KTA L AA +++ G ++ + Sbjct: 229 SGTGGVAAGQVADKESEGLPVSLAMLEYIHV--HKTARLLEAAAVSGAIVGGGADAEVER 286 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 ++ Y +G+ FQ+VDDVLD ++GK G+D K T P +L + Sbjct: 287 VRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDVEADKATYPKLLGVDK 337 >gi|227550446|ref|ZP_03980495.1| Geranyltranstransferase [Enterococcus faecium TX1330] gi|257888474|ref|ZP_05668127.1| polyprenyl synthetase [Enterococcus faecium 1,141,733] gi|257897151|ref|ZP_05676804.1| polyprenyl synthetase [Enterococcus faecium Com12] gi|293377376|ref|ZP_06623580.1| geranyltranstransferase [Enterococcus faecium PC4.1] gi|227180347|gb|EEI61319.1| Geranyltranstransferase [Enterococcus faecium TX1330] gi|257824528|gb|EEV51460.1| polyprenyl synthetase [Enterococcus faecium 1,141,733] gi|257833716|gb|EEV60137.1| polyprenyl synthetase [Enterococcus faecium Com12] gi|292644068|gb|EFF62174.1| geranyltranstransferase [Enterococcus faecium PC4.1] Length = 296 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 13/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDS 88 D + Y + +GGKR+RP+L L + D V +A A+E +HT +L+HDD+ +D+ Sbjct: 33 DAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMDND 92 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLVACTLAEGEL 145 LRRGK V+G ++L GD LL+ AF M S + L L C ++G + Sbjct: 93 DLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLLLQQLAVCAGSQGMV 152 Query: 146 RQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + SK L + E ++H + KT L AL ++A + L+ + Sbjct: 153 AGQAADIEGESKKLSLEELAFIH--ERKTGRLIRYALLAGGILAKQPEEILLLLQRLAEH 210 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+AFQ+ DD+LD G +GK G+D R K T P +L ++ Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEK 254 >gi|154502459|ref|ZP_02039519.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149] gi|153796855|gb|EDN79275.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149] Length = 300 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 74/264 (28%), Positives = 134/264 (50%), Gaps = 20/264 (7%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LAC 69 +E++ L R E+I D + Y + +GGKRLRPML T + + G + V+ Sbjct: 18 IERILKAYLPRAQGYQEVIMDAMSYSMLAGGKRLRPMLMQETYRL--FGGADSVIEPFMA 75 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIET 124 AIE IHT +L+HDD+ +D+ RRG+ +V+G +L GD LL+ AF ET Sbjct: 76 AIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMGILTGDALLNYAFETAASAFET 135 Query: 125 KSQEAL---EALSLVA-----CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSA 175 +++L +A+ ++ + G++ + S K +D + ++++ + KT L A Sbjct: 136 APEKSLLIGKAIRILGQKAGIYGMIGGQVVDVKSSGKKIDGEKLEFIY--RLKTGALIEA 193 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++ + +++AG + Q ++ +G+AFQ+ DD+LD +GK + D +N K T Sbjct: 194 SMMIGAVLAGADDESVQVVEEIAAKVGMAFQIQDDILDVISTTEVLGKPVHSDEKNEKMT 253 Query: 236 LPVILAFQRGTKREKNFWKSTIND 259 V + ++ + I+D Sbjct: 254 YVVWKGLDAAKQEVEHLSRKAISD 277 >gi|15222767|ref|NP_175376.1| GGPS6 (geranylgeranyl pyrophosphate synthase 6); farnesyltranstransferase [Arabidopsis thaliana] gi|85540951|sp|O22043|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6, mitochondrial; Short=GGPP synthase 6; Short=GGPS6; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6; AltName: Full=Dimethylallyltranstransferase 6; AltName: Full=Farnesyl diphosphate synthase 6; AltName: Full=Farnesyltranstransferase 6; AltName: Full=Geranyltranstransferase 6; Flags: Precursor gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana] gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana] gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana] gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana] Length = 336 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 119/227 (52%), Gaps = 20/227 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKR+RPML L ++ + + ACA+E IH A+L+ DD+ +DD +L Sbjct: 70 AMRYTLLPGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSL 129 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS------------QEALEALS---L 135 RRGK V+G +TS+L + L S A + + S QE A+ L Sbjct: 130 RRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGL 189 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQAL 194 VA A+ ++S KN D E YL ++ KTAVL AA V +++ G + + L Sbjct: 190 VAGQAADLAGERMSF-KNED-DELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERL 247 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 KSY +G+ FQ++DDVLD E+GK G+D GK T P ++ Sbjct: 248 KSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKVMG 294 >gi|163869177|ref|YP_001610429.1| geranyltranstransferase [Bartonella tribocorum CIP 105476] gi|161018876|emb|CAK02434.1| geranyltranstransferase [Bartonella tribocorum CIP 105476] Length = 301 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/236 (27%), Positives = 119/236 (50%), Gaps = 10/236 (4%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S E + ++Y + +GGKRLRP L + +A + + ++ + +ACA+E +H +L+HDD+ Sbjct: 33 SRPENLIKAMRYGVLNGGKRLRPFLVIQSAALFDIPVEHSLDVACALECVHCYSLIHDDL 92 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLA 141 +D+ LRRGK + + T++L G+ LL+ AF ++ + + + + L+ Sbjct: 93 PAMDNDILRRGKPTVHVEFDEATAILAGNALLTFAFEIIAHKANTLSTDTRIKLITALAQ 152 Query: 142 EGELRQLSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L + + LD+ E D + + + KTA L S A + ++I + L Sbjct: 153 SAGLGGMLGGQMLDLEAEKKPQENTDIITLQRMKTAALISFACQAGAIIGNASQELLTKL 212 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++G LG+AFQL DD+LD +GK G+D K T + + K+ + Sbjct: 213 TAFGSYLGLAFQLTDDLLDVTANTQTLGKTAGKDETAQKATFVRLYGIEETQKKRE 268 >gi|254385932|ref|ZP_05001250.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1] gi|194344795|gb|EDX25761.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1] Length = 364 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 3/208 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + V A A+E +H +LLHDD++D RR + V Sbjct: 73 GGKAVRPALALLSAEAAGAAAEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 132 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ L +G+ + +S V+ Sbjct: 133 HGPAQAILVGDALFALANEVLLELGTVEAGRAARRLTTATRKLIDGQAQDISYEHRERVS 192 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A+ + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 193 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVDDLLGIWGD 252 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 253 PEATGKQTWSDLRQRKKSLPVVAALAAG 280 >gi|45656187|ref|YP_000273.1| farnesyl-diphosphate synthase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599421|gb|AAS68910.1| geranyltranstransferase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 332 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 123/247 (49%), Gaps = 21/247 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + +GGKRLRP+L LA L+ N +LL ++E IHT +L+HDD+ +D+ Sbjct: 58 EAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGASLECIHTYSLIHDDLPSMDNDD 117 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--------LEAL-------S 134 RRG + T++L GD L S AF + + + LE L Sbjct: 118 FRRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVENGDHFLHRNLLEILHAGCGAPG 177 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVI----KSKTAVLFSAALEVSSLIAGVQNSV 190 +V+ + + ++ + ++ +N + D + ++ + KT L +AL + + + Sbjct: 178 MVSGQVYDLQMERENVKENDLTNQSDKIEMLQLTHRLKTGALIKSALLLGNRLRKDWKKR 237 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +L YG +LG+ FQ+ DD+LD G +GK G+D ++GK T P++ R K + Sbjct: 238 ETSLSQYGEDLGLLFQITDDILDVEGTQESLGKTPGKDQKSGKITYPMLFGMDRCKKMVE 297 Query: 251 NFWKSTI 257 K+ I Sbjct: 298 ELQKNLI 304 >gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 343 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 81/237 (34%), Positives = 122/237 (51%), Gaps = 20/237 (8%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + SGGKR+RPML L ++ + + ACA+E IH A+L+ DD+ +DD +LR Sbjct: 78 MRYTLLSGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLR 137 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS------------QEALEALS---LV 136 RG V+G +TS+L + L+S A + + S QE A+ LV Sbjct: 138 RGIPTNHKVFGEKTSILASNALMSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLV 197 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A A+ ++S KN D E YL ++ KTAVL AA V +++ G + + LK Sbjct: 198 AGQAADLAGERMSF-KNED-DELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLK 255 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 SY +G+ FQ++DDVLD E+GK G+D GK T P ++ + K Sbjct: 256 SYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKVMGVDNAREYAKRL 312 >gi|210615786|ref|ZP_03290767.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787] gi|210150122|gb|EEA81131.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787] Length = 296 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 121/229 (52%), Gaps = 18/229 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV--V 85 I + ++Y + +GGKRLRPML T ++ + GD ++ AIE IHT +L+HDD+ + Sbjct: 32 IMEAMEYSLLAGGKRLRPMLMRETYVL--FGGDEELIEPFMAAIEMIHTYSLVHDDLPAM 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET------KSQEALEALSLVA-- 137 D+ RRG+ +V+G +L GD LL+ AF ++ KS E +A+ +++ Sbjct: 90 DNDDYRRGRKTTHVVYGEAMGILAGDALLNFAFETAVKAFAMCPQKSIEIGQAMRILSEK 149 Query: 138 ---CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G++ + S V++E + + KT+ L A+ + +++AG + Q + Sbjct: 150 AGIYGMIGGQVVDVK-SAGQAVSKEVLDFIYELKTSALIECAMMIGAVLAGASETEVQKI 208 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + +G+AFQ+ DD+LD V +GK I D +N K T +L + Sbjct: 209 EQIAKYVGVAFQIQDDILDVTSTVEVLGKPIHSDEKNEKTTYVTLLGIE 257 >gi|218463158|ref|ZP_03503249.1| geranyltranstransferase protein [Rhizobium etli Kim 5] Length = 304 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 122/237 (51%), Gaps = 16/237 (6%) Query: 15 VNFLILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++ L+L SD P+ ++ Y + +GGKRLRP L + +A +L + + A Sbjct: 23 LDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVESAALLGGDAKAALRIGAA 82 Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKS 126 +E +H +L+HDD+ +RRGK + + T++L GD LL+ AF +V ET Sbjct: 83 LECVHCYSLVHDDLPAMDDDDMRRGKPTVHIKFDEATAILAGDSLLTYAFDIVAAPETAL 142 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEE----DYLHVIK---SKTAVLFSAALEV 179 +A +A SLV L ++ + LD+ E D +I+ KT L A E Sbjct: 143 PDASKA-SLVLALARAAGLGGMAGGQALDLAAEKQAQDEAGIIRLQAMKTGALIRFACEA 201 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++IAG R+ L+++G +G+AFQL DD+LD + MGK G+D GK TL Sbjct: 202 GAIIAGSPQDDRRRLRAFGEKIGLAFQLADDILDLTSDAATMGKATGKDAARGKGTL 258 >gi|58337602|ref|YP_194187.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus acidophilus NCFM] gi|227904242|ref|ZP_04022047.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796] gi|58254919|gb|AAV43156.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus acidophilus NCFM] gi|227867890|gb|EEJ75311.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796] Length = 289 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 11/247 (4%) Query: 16 NFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIE 72 N+L K + S++ + I ++ Y + +GGKRLRP+L LAT L + ++ + LAC IE Sbjct: 17 NYLA-KHLASEIDDQKISQIMSYSVMAGGKRLRPLLFLATLNALGKKIEESEIRLACGIE 75 Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E + L Sbjct: 76 LIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGVQWIAEGSNSSEL 135 Query: 131 EAL---SLVACTLAEGELRQLSLSKNLDVTE-EDYLHVIKS-KTAVLFSAALEVSSLIAG 185 + ++ A + G+ + + N V + E +++ ++ KT L A++E++++ A Sbjct: 136 VIMITKAIGANGMVGGQYLDIDSTNNASVADDEKFINKMEWLKTGCLIQASVEMAAVYAK 195 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + + L + G ++Q+ DD++D E GK +D GK +L ++ Sbjct: 196 ASDIEQVKLVDFAKTFGRSYQIYDDLVDVVETSEEAGKATHKDEEEGKNNTLTLLGIEKS 255 Query: 246 TKREKNF 252 K K+ Sbjct: 256 RKELKDL 262 >gi|327191787|gb|EGE58789.1| geranyltranstransferase protein [Rhizobium etli CNPAF512] Length = 387 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 121/237 (51%), Gaps = 16/237 (6%) Query: 15 VNFLILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++ L+L SD P+ ++ Y + +GGKRLRP L + +A +L + + A Sbjct: 106 LDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPFLVVESAALLGGDAQAALRIGAA 165 Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKS 126 +E +H +L+HDD+ +RRGK + + T++L GD LL+ AF +V ET Sbjct: 166 LECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATAILAGDSLLTYAFDIVAAPETAL 225 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEE----DYLHVIK---SKTAVLFSAALEV 179 + +A SLV L ++ + LD+ E D +I+ KT L A E Sbjct: 226 PDTSKA-SLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAMKTGALIRFACEA 284 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++IAG RQ L+++G +G+AFQL DD+LD + MGK G+D GK TL Sbjct: 285 GAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDAATMGKATGKDAARGKGTL 341 >gi|239983545|ref|ZP_04706069.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291455362|ref|ZP_06594752.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291358311|gb|EFE85213.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 297 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 3/202 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + + A A+E +H +LLHDD++D RR + V Sbjct: 6 GGKAVRPALALLSAEAAGAAPEAGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 65 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++L GD L + A +++E + EA A L+ + L +G+ + +S V+ Sbjct: 66 HGPAQAILAGDALFALANEILLELGTLEAGRAARRLTTASRALIDGQAQDISYEHRERVS 125 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A+ + +++ G + AL+ YG +LG+AFQ VDD+L G+ Sbjct: 126 VEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALERYGYHLGLAFQAVDDLLGIWGD 185 Query: 218 VNEMGKNIGEDFRNGKPTLPVI 239 GK D R K +LPV+ Sbjct: 186 PEATGKQTWSDLRQRKKSLPVV 207 >gi|257790345|ref|YP_003180951.1| Polyprenyl synthetase [Eggerthella lenta DSM 2243] gi|317489792|ref|ZP_07948291.1| polyprenyl synthetase [Eggerthella sp. 1_3_56FAA] gi|257474242|gb|ACV54562.1| Polyprenyl synthetase [Eggerthella lenta DSM 2243] gi|316911138|gb|EFV32748.1| polyprenyl synthetase [Eggerthella sp. 1_3_56FAA] Length = 349 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 11/221 (4%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGKR RP++ A + A AIE HTA L+HDD+ D++ LRRG+ L Sbjct: 59 NGGKRHRPLICFAACRAVGGDMARATSAAAAIEHFHTAALIHDDIADEAELRRGEPCMHL 118 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIE-------TKSQEALEALSLVACTLAEGELRQLSLSK 152 G ++ GD LS V+ TK + E + + T+ EG+ + ++ Sbjct: 119 TEGMGLAINAGDLALSLVNGTVVSDENLDDATKVRVITELIDMTRRTI-EGQALDIGWAR 177 Query: 153 N--LDVTEEDYLHVIKSKTAVLFSA-ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + D+T EDYL + KTA A L + ++I G +AL++YG++ G+AFQ+ D Sbjct: 178 DGRYDITPEDYLVMATHKTAHYSGAVPLAIGAIIGGGTEVEVEALRNYGLDTGLAFQIQD 237 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 D+L+ G K+ D GK TL V+ A Q R++ Sbjct: 238 DLLNLVGSEESTKKDFRNDITEGKRTLMVVHALQHSDDRDR 278 >gi|167750990|ref|ZP_02423117.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702] gi|167656169|gb|EDS00299.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702] Length = 302 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 6/232 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D Y + +GGKR+RP+L + ++ V A A+E IHT +L+HDD+ +D+ Sbjct: 49 DAASYSLEAGGKRIRPVLAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDNDD 108 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEAL--SLVACTLAEGELR 146 +RRG+ + G ++L GD L + A + ++ S E A+ L TL E + Sbjct: 109 MRRGRPSCHKAHGEAVALLAGDALSAYAGKYICDSDLSAEKKTAMIKELYDRTLGMIEGQ 168 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + D T + L + + KT+ L +AA + + AG A ++Y ++G+AFQ Sbjct: 169 TIDTDGKFD-TLDGLLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQ 227 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +VDD+LD V E+GK IG D + K T +L + + K + + N Sbjct: 228 IVDDILDVTSTVEELGKPIGSDAQQEKTTSVTLLGLDKARELAKKYTEGAEN 279 >gi|315125809|ref|YP_004067812.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas sp. SM9913] gi|315014323|gb|ADT67661.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas sp. SM9913] Length = 295 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 119/238 (50%), Gaps = 15/238 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87 I + Y + +GGKRLRP L T +L + +LA AIE IH+ +L+H +DD Sbjct: 32 IKEATHYSVMNGGKRLRPFLVYTTGKILGADKRDLDVLAAAIECIHSYSLVHDDLPAMDD 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLAEGELR 146 LRRG+ +V+G ++L GD L + AF ++ + + + EA L ++A L+ Sbjct: 92 DDLRRGRPTCHIVYGEAQAILAGDALQTLAFELIAKHTFKCSTEAQLKMIAALAHASGLQ 151 Query: 147 QLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQA---LKS 196 + + D+ D + + K KT L + A+ + +L A N+ +Q L + Sbjct: 152 GMVAGQGRDIAATDKVITVDELERIHKLKTGALINCAITLGALCA--PNTSQQTLDNLST 209 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 +G +G+AFQ+ DD+LD G+ +GK G D K T P +L ++ +N + Sbjct: 210 FGYAIGLAFQVHDDILDVEGDTLTLGKPQGSDIAANKATYPALLGMLGAKQKAQNLIQ 267 >gi|311895176|dbj|BAJ27584.1| putative polyprenyl diphosphate synthase [Kitasatospora setae KM-6054] Length = 357 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 9/214 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + V ++E +H +LLHDD++D RR + A V Sbjct: 63 GGKAVRPALALLSAEAVGANAQVGVPGGVSVELVHNFSLLHDDLMDGDETRRHRATAWTV 122 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETK------SQEALEALSLVACT---LAEGELRQLSLS 151 +G +VL GD L + ++++ +A A+ L+ L +G+ +S Sbjct: 123 FGPAQAVLAGDALATLGTEVLLDAAVTGGADPVDAARAVRLITTATRRLIDGQALDVSFE 182 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + VT E+ L + KT L +A+ + +++AG + V AL+ YG +LG+AFQ VDD+ Sbjct: 183 QRDAVTVEECLAMEGGKTGALLAASAAIGAVLAGADDRVSDALQRYGYHLGLAFQAVDDL 242 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 L G GK D ++ K +LPV A G Sbjct: 243 LGIWGATEVTGKPHWSDLQSRKKSLPVCAALAEG 276 >gi|182436056|ref|YP_001823775.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464572|dbj|BAG19092.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 347 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 5/211 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L LA A L + V A A+E H TLLHDDV+D+ RR + A V+ Sbjct: 62 GKAIRPALVLAAASALGGDPERAVRAAVAVELAHNFTLLHDDVIDEDTTRRHRPTAWAVF 121 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALS-LVAC--TLAEGELRQLSLSKNL--DV 156 G +++ GD +L+ A ++ E A A++ L +C L G+ + + +V Sbjct: 122 GIPDAIITGDAMLALAQRLLAEDPHPAAARAVARLSSCIIELCAGQQADCAFEERGPEEV 181 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T ++ L + +KT L A + +L AG ++ +A+ +G G++FQL+DD++ G Sbjct: 182 TLDECLTMATAKTGALLGCACSLGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWG 241 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + GK +G D K +LPV+ A GT Sbjct: 242 DPDRTGKPVGADLAAHKKSLPVVAALTSGTP 272 >gi|17546941|ref|NP_520343.1| geranyltranstransferase [Ralstonia solanacearum GMI1000] gi|17429241|emb|CAD15929.1| probable geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum GMI1000] Length = 299 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 21/227 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GKR+RP+L A + E + ++CA+E IH +L+HDD+ L Sbjct: 36 AMRYATLGAGKRVRPLLAHAAGALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG+ + T++LVGD L +QAF + E + LV GEL + S Sbjct: 96 RRGRPTVHRAYDEATALLVGDALQTQAFIALAELGAVSPATRAGLV------GELARASG 149 Query: 151 S------KNLDVTE------EDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 S + +D+ +D L + + KT L A+L + +L AGV + + + +Y Sbjct: 150 SLGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNAAALEQVDAY 209 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ+VDD+LD + +GK G+D N KPT IL +R Sbjct: 210 AGAVGLAFQVVDDILDVTADTATLGKTAGKDEANDKPTYVSILGLER 256 >gi|309809474|ref|ZP_07703332.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D] gi|308170146|gb|EFO72181.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D] Length = 288 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 127/244 (52%), Gaps = 12/244 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDS 88 +++ Y + +GGKRLRP+L LAT +L + + + +AC IE IHT +L+HDD+ +D+ Sbjct: 33 EIMSYSVLAGGKRLRPLLFLATLEILSHPISEKEIKIACGIELIHTYSLIHDDLPAMDND 92 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALS--LVACTLAEGEL 145 RRGK+ + WG ++L GD LL + E + S E ++ ++ + +A G+ Sbjct: 93 DYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSYELIKVITRAIGPNGMAGGQY 152 Query: 146 RQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + NL E ++ ++ KT L A++++++ A + V+ L + G Sbjct: 153 MDIDSTNNLSYKRNETFIDKMEFLKTGCLIVASVQMAAEYASSSDKVQMNLLHFAEAFGR 212 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 A+Q+ DD++D + GK +D NGK +L ++ + I GK++ Sbjct: 213 AYQIYDDIVDIMQTSVQAGKKTHKDADNGKNNTLTMLGLEKSQAELSDL----IARGKVA 268 Query: 264 VENL 267 ++++ Sbjct: 269 IKDI 272 >gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501] gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501] Length = 295 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 116/223 (52%), Gaps = 15/223 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GGKRLRP+LTL A L + ++ A A+E +H +L+HDD+ Sbjct: 36 MRYSTLMGGKRLRPVLTLIVANSLFGVEEERIMPAAAAVELVHNYSLIHDDLPCMDDDDY 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQLS 149 RRG++A V+G+ +VL GD LL+ AF ++ + + E + V+ +A+G R + Sbjct: 96 RRGELANHKVFGDAIAVLSGDALLTYAFELLTKLEGDFTAEQILKVSKEVAQGAGFRGMV 155 Query: 150 LSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + D+ E +++H + KT L AA+ +++ G AL Y N Sbjct: 156 GGQAADMLAEGKAVEDIDLEFIH--RYKTGALLQAAVRTGAILGGADKEELAALTIYAEN 213 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G++FQ++DD+LD G+ ++GK +G D K T P + + Sbjct: 214 IGLSFQIIDDILDIVGDEEKLGKEVGSDEGQDKATFPSVYGLE 256 >gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T] gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T] Length = 302 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 74/233 (31%), Positives = 118/233 (50%), Gaps = 19/233 (8%) Query: 20 LKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L + D + P + ++Y + GGKR+RP+L A + ++ +ACA+E IH Sbjct: 25 LAGVLPDAAIAPHRLHEAMRYAVLGGGKRVRPLLAHAAGALAGAAAEDLDRIACAVELIH 84 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEA 129 +L+HDD+ +DD LRRGK + + T++L GD L + AF ++ E T Sbjct: 85 AYSLVHDDLPCMDDDVLRRGKPTVHVEFDEATALLAGDALQTLAFQVLAERPLGTDPANQ 144 Query: 130 LEALSLVACT-----LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 L L+ +A +A G+ L S+ K L E +++H+ KT L AA+ + + Sbjct: 145 LAMLNQLAIASGSRGMAGGQAIDLASVGKRLGREELEFMHI--HKTGALIRAAVLLGARA 202 Query: 184 AGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 G + A L Y +G+ FQ+VDD+LD + +GK G+D N KPT Sbjct: 203 GGTLGADEHARLDHYAKVVGLLFQVVDDLLDAEADTATLGKTAGKDADNDKPT 255 >gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01] gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01] Length = 307 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 16/241 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + +++ +F+GGKRLRP+L + +A + D+ + +A A+EFIHT +L+HDD+ Sbjct: 43 VTQAMRHSLFAGGKRLRPILCMTSAEAVGGNKDHVMDVAAALEFIHTYSLIHDDLPALDD 102 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGE 144 RRG + T++L GD LL+ AF ++ L A L+++A Sbjct: 103 DDYRRGTPTCHKAFDEATAILAGDGLLTSAFEILSHAADDGLLPAEKVLTIIAGISHAAG 162 Query: 145 LRQLSLSKNLDV-------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + L + LD+ T E+ + +KT + ++ + + G AL Y Sbjct: 163 CNGMILGQMLDIEGEHESLTREELEDIHNNKTGAMIEVSVFSGAYLGGGTPEQIAALDVY 222 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 N+G+AFQ++DD+L+ G+ MGK +G D GK T P ++ G ++F + I Sbjct: 223 AKNVGLAFQVIDDILNVIGDPKVMGKAVGTDAELGKSTYPALM----GLDGAQDFAERLI 278 Query: 258 N 258 N Sbjct: 279 N 279 >gi|325913420|ref|ZP_08175786.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B] gi|325477189|gb|EGC80335.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B] Length = 288 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 127/244 (52%), Gaps = 12/244 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDS 88 +++ Y + +GGKRLRP+L LAT +L + + + +AC IE IHT +L+HDD+ +D+ Sbjct: 33 EIMSYSVLAGGKRLRPLLFLATLEILSHPISEKEIKIACGIELIHTYSLIHDDLPAMDND 92 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALS--LVACTLAEGEL 145 RRGK+ + WG ++L GD LL + E + S E ++ ++ + +A G+ Sbjct: 93 DYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSYELIKVITRAIGPNGMAGGQY 152 Query: 146 RQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + NL E ++ ++ KT L A++++++ A + V+ L + G Sbjct: 153 MDIDSTNNLSYKRNETFIDKMEFLKTGCLIVASVQMAAKYANSSDKVQMNLLHFAEAFGR 212 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 A+Q+ DD++D + GK +D NGK +L ++ + I GK++ Sbjct: 213 AYQIYDDIVDIMQTSVQAGKKTHKDADNGKNNTLTMLGLEKSQAELSDL----IARGKVA 268 Query: 264 VENL 267 ++++ Sbjct: 269 IKDI 272 >gi|299066176|emb|CBJ37360.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum CMR15] Length = 299 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 11/222 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GKR+RP+L A + E + ++CA+E IH +L+HDD+ L Sbjct: 36 AMRYATLGAGKRVRPLLAHAAGALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGELRQLS 149 RRG+ + T++LVGD L +QAF + E + LV A G L ++ Sbjct: 96 RRGRPTVHRAYDEATALLVGDALQTQAFIALAELGAVSPATRAGLVGELARASGSL-GMA 154 Query: 150 LSKNLDVTE------EDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + +D+ +D L + + KT L A+L + +L AGV + + + +Y +G Sbjct: 155 GGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVG 214 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +AFQ+VDD+LD + +GK G+D N KPT IL +R Sbjct: 215 LAFQVVDDILDVTADTATLGKTAGKDEANDKPTYVSILGLER 256 >gi|28199392|ref|NP_779706.1| farnesyl-diphosphate synthase [Xylella fastidiosa Temecula1] gi|182682121|ref|YP_001830281.1| polyprenyl synthetase [Xylella fastidiosa M23] gi|28057498|gb|AAO29355.1| geranyltranstransferase [Xylella fastidiosa Temecula1] gi|182632231|gb|ACB93007.1| Polyprenyl synthetase [Xylella fastidiosa M23] gi|307578386|gb|ADN62355.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 291 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 16/223 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + SGGKR+RP+L A + + A A+E IH +L+HDD+ +DD L Sbjct: 34 AMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------- 143 RRG+ + + T++L GD L + AF + + + +L L T A G Sbjct: 94 RRGRPTVHIAFDEATAILTGDALQTLAFECLADAPADTSLRIAWLQTLTHAAGVAGMCGG 153 Query: 144 ---ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 ++ S+ L E +H +KS T L AA+ + +L +L ++ Sbjct: 154 QALDIDATGQSQTLKALEA--MHALKSGT--LMRAAVRMGALAGDPSAEDLHSLDTFAAT 209 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+AFQ+ DD+LD ++GK G+D K T P +L+ + Sbjct: 210 LGLAFQVRDDILDIESSSEQLGKTAGKDAIQQKSTFPALLSVE 252 >gi|84394354|ref|ZP_00993075.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01] gi|84375013|gb|EAP91939.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01] Length = 294 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 13/261 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++ E++N L L R+ + + + ++Y + GGKR RP L T ML + A Sbjct: 11 RNNEQLN-LWLDRLPHQNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPAS 69 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---- 123 AIE IH +L+HDD+ +DD LRRG + + T++L GD L + AF ++ E Sbjct: 70 AIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILTGDALQTLAFTILAEGTLS 129 Query: 124 --TKSQEALEALSLVACTLAEGELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +S L + A+G +L ++N VT E+ V ++KT L +A+ Sbjct: 130 ADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKTGALMKSAIR 189 Query: 179 VSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +L AG + V L Y +G+AFQ+ DD+LD + +GK G D K T P Sbjct: 190 LGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTETLGKPQGSDQDLNKSTYP 249 Query: 238 VILAFQRGTKREKNFWKSTIN 258 +L + ++ + + + Sbjct: 250 SLLGLEGAQEKAQTLLQEALQ 270 >gi|195953616|ref|YP_002121906.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1] gi|195933228|gb|ACG57928.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 258 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 11/213 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D + Y +F GKR+RP+L + + ++ + L CA+EFIH +L+HDD+ +D+ Sbjct: 28 DAMAYYVFQEGKRIRPVLCVIGGYACDLDEEDAITLGCAVEFIHNYSLIHDDMPELDNDD 87 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQL 148 RRGK ++G ++L GD LLS AF ++ + + L+ V +++ + + Sbjct: 88 ERRGKPTCHKIFGQDIALLAGDGLLSLAFDILSNESLYKNPKNLAKVVNYVSKNAGIEGM 147 Query: 149 SLSKNLDVT-EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + D+ E+D+L V KTA L +L + S++ GV S+ + L G N+G+ FQL Sbjct: 148 VAGQVYDIKGEKDFLKVASLKTAALIKTSLVIPSILKGVDFSLYEKL---GHNIGVLFQL 204 Query: 208 VDDVLDYRGEVNEMGK----NIGEDFRNGKPTL 236 DD D G +G+ + +D++N TL Sbjct: 205 TDDYYDKDGAYVVLGEKPLLKLIQDYKNTIFTL 237 >gi|259501558|ref|ZP_05744460.1| geranyltranstransferase [Lactobacillus iners DSM 13335] gi|302191468|ref|ZP_07267722.1| geranyltranstransferase [Lactobacillus iners AB-1] gi|309804209|ref|ZP_07698286.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d] gi|309806895|ref|ZP_07700881.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b] gi|309808828|ref|ZP_07702713.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a] gi|312874432|ref|ZP_07734462.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d] gi|325911777|ref|ZP_08174181.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D] gi|329919888|ref|ZP_08276826.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G] gi|259167076|gb|EEW51571.1| geranyltranstransferase [Lactobacillus iners DSM 13335] gi|308163612|gb|EFO65882.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d] gi|308166713|gb|EFO68906.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b] gi|308167954|gb|EFO70087.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a] gi|311090044|gb|EFQ48458.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d] gi|325476283|gb|EGC79445.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D] gi|328936978|gb|EGG33408.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G] Length = 288 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 127/244 (52%), Gaps = 12/244 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDS 88 +++ Y + +GGKRLRP+L LAT +L + + + +AC IE IHT +L+HDD+ +D+ Sbjct: 33 EIMSYSVLAGGKRLRPLLFLATLEILSHPISEKEIKIACGIELIHTYSLIHDDLPAMDND 92 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALS--LVACTLAEGEL 145 RRGK+ + WG ++L GD LL + E + S E ++ ++ + +A G+ Sbjct: 93 DYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSYELIKVITRAIGPNGMAGGQY 152 Query: 146 RQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + NL E ++ ++ KT L A++++++ A + V+ L + G Sbjct: 153 MDIDSTNNLSYKRNETFIDKMEFLKTGCLIVASVQMAAKYANSSDKVQMNLLHFAEAFGR 212 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 A+Q+ DD++D + GK +D NGK +L ++ + I GK++ Sbjct: 213 AYQIYDDIVDIMQTSVQAGKKTHKDADNGKNNTLTMLGLEKSQAELSDL----IARGKVA 268 Query: 264 VENL 267 ++++ Sbjct: 269 IKDI 272 >gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB] gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB] Length = 297 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 75/240 (31%), Positives = 121/240 (50%), Gaps = 20/240 (8%) Query: 20 LKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L R + IP + ++Y GGKR+RP+L A + + ++ CA+E IH Sbjct: 21 LGRFLPGPDCIPARLHEAMRYATLGGGKRVRPLLAHAAGELTGATPEALDIVGCAVEMIH 80 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET---KSQEAL 130 +L+HDD+ +DD LRRG+ + + T++LVGD L + AF ++ + ++ L Sbjct: 81 AYSLVHDDLPCMDDDVLRRGRPTCHVEFDEPTALLVGDSLQTMAFELLASQPLGEPKQQL 140 Query: 131 EALSLVACT-----LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 E ++L+A +A G+ L S+ K L E + +H + KT L AA+ + +L A Sbjct: 141 EIIALLAHASGSRGMAGGQAIDLASVGKPLTQPELELMHAL--KTGALIRAAVLLGAL-A 197 Query: 185 GVQNSV--RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G S R +L + G+ FQ+VDD+LD +GK G+D KPT +L Sbjct: 198 GQPLSADERTSLDRFAKRAGLLFQVVDDILDCTASTATLGKTAGKDEAADKPTYVALLGL 257 >gi|227893300|ref|ZP_04011105.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047] gi|227864880|gb|EEJ72301.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047] Length = 289 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 71/255 (27%), Positives = 126/255 (49%), Gaps = 10/255 (3%) Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAI 71 ++ + K + +VE I ++ Y + +GGKRLRP+L LAT +L + + + +AC I Sbjct: 15 IDDYLAKHLADEVEDPKISQIMAYSVMAGGKRLRPLLFLATLNVLGKKIEEPEIRIACGI 74 Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E + Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSNSAK 134 Query: 130 LEALSLVACT---LAEGELRQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIA 184 L A+ A + G+ + + N V + +++ ++ KT L A++E++++ A Sbjct: 135 LAAMITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTGCLIQASVEMAAVYA 194 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + + L + G ++Q+ DD++D E GK +D GK +L + Sbjct: 195 RATDIEQVKLVDFAKAFGRSYQIYDDLVDVVETSEEAGKATHKDEEEGKNNTLTLLGIDK 254 Query: 245 GTKREKNFWKSTIND 259 K KN K +D Sbjct: 255 SRKELKNLIKQAKDD 269 >gi|87200267|ref|YP_497524.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM 12444] gi|87135948|gb|ABD26690.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM 12444] Length = 303 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 69/251 (27%), Positives = 123/251 (49%), Gaps = 10/251 (3%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D+++ L+L + + + ++Y GGKRLRP+L AT + + V + Sbjct: 21 EDIDRSFDLLLPVPGDPRDRLVEAMRYAAIGGGKRLRPLLVCATGALHGVSREAAVRVGT 80 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-S 126 AIE IH +L+HDD+ +D+ LR GK + + + T+VL GD L AF ++ + S Sbjct: 81 AIEAIHVYSLIHDDLPCMDNDGLRHGKPTVHVAFDDATAVLAGDALHDFAFEVLSDPATS 140 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEE----DYLHVIKS---KTAVLFSAALEV 179 + + L+ + + + +D+ E D V + KT L A++E+ Sbjct: 141 GDPFTRIELIRTLATASGMNGMCGGQMMDIVAETSSFDLPTVTRLQQLKTGALLGASVEL 200 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++ V R L+ Y ++G+AFQ+ DD+LD G+ GK + +D GK T + Sbjct: 201 GAILGKVPPEGRTHLRGYARDIGLAFQIADDLLDAEGDEAAAGKALRKDAAQGKETFLSL 260 Query: 240 LAFQRGTKREK 250 L R ++ + Sbjct: 261 LGADRAREQAR 271 >gi|24373100|ref|NP_717143.1| geranyltranstransferase [Shewanella oneidensis MR-1] gi|24347286|gb|AAN54587.1|AE015598_6 geranyltranstransferase [Shewanella oneidensis MR-1] Length = 293 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 105/215 (48%), Gaps = 14/215 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKR+RP L + M + A AIE IH +L+HDD+ +DD ALRRG+ Sbjct: 42 GGKRIRPFLVYSVGQMFGVPLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVH 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVACT----LAEGELRQL- 148 + + T++L GD L + AF +V E T Q +L + + G+ L Sbjct: 102 IAFDEATAILAGDALQTLAFEIVTEAVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLA 161 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S K++D+ LH +K T L S A+E++ + A Q + + +G+AFQ+ Sbjct: 162 STDKHIDLKALTQLHNMK--TGALISCAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQ 219 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 DD+LD E+GK G D + K T P +L Q Sbjct: 220 DDILDIIATTEELGKPQGSDAESNKSTFPQLLGLQ 254 >gi|218710368|ref|YP_002417989.1| geranyltranstransferase [Vibrio splendidus LGP32] gi|218323387|emb|CAV19564.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio splendidus LGP32] Length = 294 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 13/261 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++ E++N L L R+ + + + ++Y + GGKR RP L T ML + A Sbjct: 11 RNNEQLN-LWLDRLPHQNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPAS 69 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---- 123 AIE IH +L+HDD+ +DD LRRG + + T++L GD L + AF ++ E Sbjct: 70 AIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILTGDALQTLAFTILAEGTLS 129 Query: 124 --TKSQEALEALSLVACTLAEGELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +S L + A+G +L ++N VT E+ V ++KT L +A+ Sbjct: 130 ADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKTGALMKSAIR 189 Query: 179 VSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +L AG + V L Y +G+AFQ+ DD+LD + +GK G D K T P Sbjct: 190 LGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTETLGKPQGSDQDLNKSTYP 249 Query: 238 VILAFQRGTKREKNFWKSTIN 258 +L + ++ + + + Sbjct: 250 SLLGLEGAQEKAQTLLQEALQ 270 >gi|327458743|gb|EGF05091.1| geranyltranstransferase [Streptococcus sanguinis SK1057] Length = 291 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 81/272 (29%), Positives = 134/272 (49%), Gaps = 34/272 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEF 73 +F +++ SD + +V+ Y + +GGKR+RP+L L A LE + H +A A+E Sbjct: 16 DFYRSQQVSSD---LSEVILYSVKAGGKRIRPLLLLELIQAFGLEL-AEAHYQVAAALEM 71 Query: 74 IHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQ-- 127 IHT +L+HDD+ RRG++ + +G ++L GD L + ++ E SQ Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVK 131 Query: 128 -EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + LSL A + +GE + +SL ED ++ +KT L + Sbjct: 132 VDLISELSLAAGSFGMVAGQVLDMQGEGQAISL--------EDLKNIHANKTGKLLTYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LI Q SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T P Sbjct: 184 VAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKK 269 L G KNF+ T+++ + + +L++ Sbjct: 244 AFL----GLDGAKNFFNQTLDEAVLILSDLEE 271 >gi|258624384|ref|ZP_05719332.1| geranyltranstransferase [Vibrio mimicus VM603] gi|258583346|gb|EEW08147.1| geranyltranstransferase [Vibrio mimicus VM603] Length = 294 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 78/245 (31%), Positives = 118/245 (48%), Gaps = 14/245 (5%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L L RI + + ++Y + GGKR RP L T ML A A+E IH Sbjct: 18 LWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSELDTPASAVECIHAY 77 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 +L+HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 78 SLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDALQTLAFTILAEGSLSPAGETQRV 137 Query: 136 VAC-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGV 186 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG Sbjct: 138 AMIQALAEASGAQGMCLGQALDLAAENRLVSLEELETIHRNKTGALMRCAIRLGALAAGE 197 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + ++ L Y +G+AFQ+ DD+LD + +GK G D + K T P +L + Sbjct: 198 KGRTILPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQQLNKSTYPALLGLE-- 255 Query: 246 TKREK 250 REK Sbjct: 256 GAREK 260 >gi|148976608|ref|ZP_01813295.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium SWAT-3] gi|145963959|gb|EDK29217.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium SWAT-3] Length = 294 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 13/261 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++ E++N L L R+ + + + ++Y + GGKR RP L T ML + A Sbjct: 11 RNNEQLN-LWLDRLPHQNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPAS 69 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKS 126 A+E IH +L+HDD+ +DD LRRG + + T++L GD L + AF ++ E T S Sbjct: 70 AVECIHAYSLIHDDLPAMDDDELRRGHQTCHIKFDEATAILTGDALQTLAFTILAEGTLS 129 Query: 127 QEALEALSLVACTLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALE 178 + + LAE Q + + + LD+ E+ V ++KT L +A+ Sbjct: 130 ADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRAVTLKELEEVHRNKTGALMKSAIR 189 Query: 179 VSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +L AG + V L Y +G+AFQ+ DD+LD G+ +GK G D K T P Sbjct: 190 LGALAAGEKAFEVLPQLDKYADAIGLAFQVQDDILDIIGDTETLGKPQGSDQDLNKSTYP 249 Query: 238 VILAFQRGTKREKNFWKSTIN 258 +L + ++ ++ + + Sbjct: 250 SLLGLEGAQEKAQSLLQEALQ 270 >gi|290957483|ref|YP_003488665.1| polyprenyl diphosphate synthase [Streptomyces scabiei 87.22] gi|260647009|emb|CBG70108.1| putative polyprenyl diphosphate synthase [Streptomyces scabiei 87.22] Length = 409 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 107/211 (50%), Gaps = 5/211 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L LA L R V A A+E +H TLLHDDV+D RR + A V+ Sbjct: 125 GKAIRPALVLAAVHALGGRESVAVRAAAAVELVHNFTLLHDDVMDRDTTRRHRATAWTVF 184 Query: 102 GNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACT--LAEGELR--QLSLSKNLDV 156 G ++L GD + + A ++ E A A L +C L EG+ +L LDV Sbjct: 185 GVPDAILAGDAMQALAQRLLAEDPHPASAAAAARLASCVVELCEGQHTDTELEGRPPLDV 244 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T ++ L + ++KT L A + +L AG +AL ++G G+AFQL+DDV+ G Sbjct: 245 TLDEVLTMAEAKTGALLGCACAIGALYAGAAEEDVEALDAFGREAGLAFQLIDDVIGIWG 304 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + GK G D K +LPV+ A GT Sbjct: 305 DPSRTGKPAGADLMVRKKSLPVVAALASGTP 335 >gi|223986292|ref|ZP_03636304.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM 12042] gi|223961731|gb|EEF66231.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM 12042] Length = 280 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 13/237 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + ++Y + GKRLRP L A A + A A+E +HT +L+HDD+ +D+ Sbjct: 21 VSEAMEYSLMGKGKRLRPQLLFAVAEGYGLSAQAGFMAAGALEMMHTYSLIHDDLPAMDN 80 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACT 139 RRG+ + T++L GD LL+QAF + + S + ++AL +V A Sbjct: 81 DDYRRGRKTCHKQFNEATAILAGDGLLTQAFVLAANS-SDDPVKALKIVKELASAGGAEG 139 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + G+++ L + VT E V KT LF+A L + +++AG ++ Q + G Sbjct: 140 MILGQIKDLEAENSQAVTLEQLKEVHLYKTGCLFTAPLVMGAILAGQDAAIPQ-WRRIGA 198 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 +G+AFQ+ DD+LD E+GK+ D N K T +L + ++ T Sbjct: 199 LMGLAFQIQDDILDVTKSSKELGKS-ASDLDNKKSTYVTLLGLGQAQDAMTEVYRQT 254 >gi|238024940|ref|YP_002909172.1| polyprenyl synthetase [Burkholderia glumae BGR1] gi|237879605|gb|ACR31937.1| Polyprenyl synthetase [Burkholderia glumae BGR1] Length = 294 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 12/222 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + + A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAVMGGGKRVRPLLCHAAGELTGASEAASNAASAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALE---ALSLVACTLA 141 LRRGK + + T++LVGD L SQAF + + Q AL AL+ + +A Sbjct: 94 LRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAAALSPQQQAALVRELALASGSIGMA 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMN 200 G+ L+ + +T E + + KT L A++ + +L + +AL +Y Sbjct: 154 GGQAIDLASVGQM-LTREQLETMHRMKTGALLRASVRMGALAGETPTADTMRALDAYAAA 212 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D KPT I+ Sbjct: 213 VGLAFQVVDDILDVTTDSATLGKTAGKDAAANKPTYVSIIGL 254 >gi|94311552|ref|YP_584762.1| farnesyl-diphosphate synthase [Cupriavidus metallidurans CH34] gi|93355404|gb|ABF09493.1| geranyltranstransferase [Cupriavidus metallidurans CH34] Length = 294 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 15/237 (6%) Query: 20 LKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L+ + IP + ++Y + GGKR+RP+L A ++ + ACA+E IH Sbjct: 19 LEAALPSTDTIPYTLHEAMRYAVLGGGKRVRPLLVHAAGEVVGATPEACDAAACAVEMIH 78 Query: 76 TATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +L+HDD+ LRRG+ + T++LVGD L SQAF ++ +T + A L Sbjct: 79 AYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQSQAFIVLAQTPALAAEARL 138 Query: 134 SLVA-CTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +VA +A G + + + +D +T E + + KT L A++ + +L Sbjct: 139 KVVAELAVASGSI-GMCGGQAIDLQNVGKAMTREALEGMHRMKTGALLRASVRMGALCGN 197 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + + AL Y +G+AFQ+VDD+LD + +GK G+D N KPT +L Sbjct: 198 IDQAGLVALDRYAAAVGLAFQVVDDILDVTADTATLGKTAGKDAANDKPTYVSLLGL 254 >gi|302537967|ref|ZP_07290309.1| polyprenyl diphosphate synthase [Streptomyces sp. C] gi|302446862|gb|EFL18678.1| polyprenyl diphosphate synthase [Streptomyces sp. C] Length = 326 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 3/208 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A + + A A+E +H +LLHDD++D RR + V Sbjct: 35 GGKAVRPALALLSAEAAGAAAEVGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 94 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + EA A L+ + L +G+ + +S V+ Sbjct: 95 HGPALAILVGDALFALANEVLLELGTVEAGRATRRLTTASRKLIDGQAQDISYEHRERVS 154 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 ++ L + +KT L + ++ + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 155 VQECLEMEGNKTGALLACSVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVDDLLGIWGD 214 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 215 PESTGKQTWSDLRQRKKSLPVVAALAAG 242 >gi|325685896|gb|EGD27962.1| farnesyltranstransferase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 296 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 75/261 (28%), Positives = 126/261 (48%), Gaps = 22/261 (8%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHD 82 SD +++ Y + +GGKRLRP+L LAT AL +E + V AC IE IHT +L+HD Sbjct: 36 SDDSRFAEIMAYSVMAGGKRLRPLLFLATLDALGVEIT-EKEVQAACGIELIHTYSLIHD 94 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEA 132 D+ +D+ RRG++ + WG ++L GD L + + + EA+ Sbjct: 95 DLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQPLGIQWIAQAEHNWKLIEIITEAVGP 154 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +VA G+ + + N D +EE H+ KT L A++++++ +A + Q Sbjct: 155 KGMVA-----GQYLDIDTTNNEDSSEEVIDHMEWLKTGCLILASVQMATALAACPDQQAQ 209 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 ++ + G ++QL DD++D E GK +D GK +L G + +N Sbjct: 210 KYLAFAKHFGRSYQLYDDLVDIVESQEEAGKATHKDQEVGKNNSLTML----GAEATRNE 265 Query: 253 WKSTINDGKISVENLKKAFII 273 K I GK ++ K ++ Sbjct: 266 LKQLIEKGKANLAGEKAEVLL 286 >gi|115379699|ref|ZP_01466777.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps) [Stigmatella aurantiaca DW4/3-1] gi|310821402|ref|YP_003953760.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1] gi|115363289|gb|EAU62446.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps) [Stigmatella aurantiaca DW4/3-1] gi|309394474|gb|ADO71933.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1] Length = 312 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 14/205 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++ + + GKRLRP+L L + + ACA+E IH TL+HDD+ +DD+ Sbjct: 48 AIREALLADGKRLRPILCLEACEWVGGSVKAALPAACALEMIHKMTLVHDDLPAMDDAET 107 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL--------SLVACTLAE 142 R G+ A V G ++L GD LL AF ++ T+ A +L LA Sbjct: 108 RNGRPALHKVHGEALAILAGDALLVHAFGLLASTRGVPAERVTVAIRRLCQALGTTGLAG 167 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+ + LS+ VT E HV KTA F A+ + + + G S +AL YGM LG Sbjct: 168 GQALDV-LSQTEGVTPEKLDHVHTWKTASFFEVAIVIGAEMGGADASQVEALARYGMLLG 226 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGE 227 AFQ+ DD+LD R +E GK GE Sbjct: 227 RAFQISDDLLDAR---DEKGKVEGE 248 >gi|332201672|gb|EGJ15742.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA47368] Length = 291 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 75/254 (29%), Positives = 125/254 (49%), Gaps = 31/254 (12%) Query: 34 VKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 V Y I +GGKR+RP L L AL + + H +A A+E IHT +L+HDD+ +D+ Sbjct: 31 VLYSIHAGGKRIRPFLLLEVLEALQVAIK-PAHAQVATALEMIHTGSLIHDDLPAMDNDD 89 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ---EALEALSLVACTLA--- 141 RRG++ +G ++L GD L + ++ + SQ + + LSL + +L Sbjct: 90 YRRGRLTNHKKFGEAMAILAGDALFLDPYALIAQADLPSQIKVDLIANLSLASGSLGMVA 149 Query: 142 ------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 EGE + LSL E+ + +KT L + + +++IA + ++ LK Sbjct: 150 GQVLDMEGEHQHLSL--------EELQTIHANKTGKLLAYPFQAAAIIAELSPEMQVKLK 201 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + G +G+AFQ+ DDVLD E+GK +D + K T P +L G + F Sbjct: 202 TVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALL----GLEESIAFCNQ 257 Query: 256 TINDGKISVENLKK 269 T++ +E + + Sbjct: 258 TLDQANEKLEEIAQ 271 >gi|27363789|ref|NP_759317.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] gi|27359906|gb|AAO08844.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] Length = 298 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 12/253 (4%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L L ++ + + ++Y + GGKR RP L AT ML + A AIE IH Sbjct: 22 LWLDKLPHQNQALIQAMRYGLVLGGKRARPFLVYATGEMLGCSQEQLDTPASAIECIHAY 81 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQEA 129 +L+HDD+ +DD LRRG+ + + T++L GD L + AF ++ E ++Q Sbjct: 82 SLIHDDLPAMDDDELRRGQPTCHVKFDEATAILTGDALQTLAFTILAEGTLSADGETQRV 141 Query: 130 LEALSLVACTLAEGELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +L + A+G +L ++N VT E+ + ++KT L A+ + +L AG Sbjct: 142 AMIQALAQASGAQGMCIGQALDLAAENRAVTLEELEEIHRNKTGALIRCAVRLGALAAGE 201 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + ++ L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L + Sbjct: 202 KGLAILPQLEKYSTAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLLGLEGA 261 Query: 246 TKREKNFWKSTIN 258 ++ + Sbjct: 262 MEKAHTLLHEALQ 274 >gi|29827670|ref|NP_822304.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] gi|29604770|dbj|BAC68839.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] Length = 344 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 89/183 (48%), Gaps = 5/183 (2%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 V A A+E +HT +LLHDD++D A+RRG+ A +G +VL GD L + A + Sbjct: 86 VPAAVAVELVHTFSLLHDDIMDGDAMRRGRPALWKAYGTGPAVLAGDALFALAVQTLTTA 145 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNL-----DVTEEDYLHVIKSKTAVLFSAALEV 179 + A LS L G+ L + V+ +Y + + KT L AL + Sbjct: 146 SAPGAAHRLSAALGDLVRGQADDLLFAHRPWTGPEAVSVAEYEAMAEHKTGSLLGCALAL 205 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + +AG L G +LG+AFQ+VDD+L G+ GK + D R GK T PV+ Sbjct: 206 GAHLAGAPEETAAVLDRTGRHLGVAFQIVDDLLGIWGDPAVTGKPVHGDLRQGKKTFPVL 265 Query: 240 LAF 242 A Sbjct: 266 AAL 268 >gi|268319202|ref|YP_003292858.1| geranyltranstransferase [Lactobacillus johnsonii FI9785] gi|262397577|emb|CAX66591.1| geranyltranstransferase [Lactobacillus johnsonii FI9785] Length = 288 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 129/256 (50%), Gaps = 12/256 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 L+D K +++ + + + ++++ ++ Y + +GGKRLRP+L LAT L ++ Sbjct: 3 LKDFQEKYTPQIDNFLKEHLVTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLETLNHKI 62 Query: 62 DNHVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + L +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL Sbjct: 63 EEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLLPLGI 122 Query: 119 CMVIETKSQEALEAL---SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS---KTAVL 172 + E + AL + ++ + G+ + + N D +E+ + + KT L Sbjct: 123 QWITEGSNSAALAIVISQAVGPNGMVGGQYLDIDTTNN-DSAKENAKMIDQMEWLKTGCL 181 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 A+++++++ AG +S L ++ G ++Q+ DD++D E GK +D G Sbjct: 182 IEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVETATEAGKATHKDATEG 241 Query: 233 KPTLPVILAFQRGTKR 248 K +L + K+ Sbjct: 242 KNNTLTLLGIEASRKQ 257 >gi|260438375|ref|ZP_05792191.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876] gi|292808961|gb|EFF68166.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876] Length = 297 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 117/225 (52%), Gaps = 14/225 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC--AIEFIHTATLLHDDV--VDD 87 + + Y + +GGKRLRP+L L T L + GD+ ++ C A E +HT +L+HDD+ +D+ Sbjct: 34 EAMNYSVNAGGKRLRPIL-LHTFYKL-FGGDSDIVKPCMAAYEMLHTYSLVHDDLPAIDN 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQA---FCMVIETK-SQEALEALSLVA-CTLAE 142 RRG +G T++L GD LL QA F + +T+ S ++AL + T Sbjct: 92 DNYRRGMPTTHARFGEATAILAGDGLLHQAYETFIKIFDTEISTRTVKALKIFGDKTGIN 151 Query: 143 GELRQLS---LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G L S L +++E ++ + KT L A+ S++AG + +K G Sbjct: 152 GMLGGQSADVLHTGEIISDELLYYIYEKKTGALIEGAMLTGSVLAGCNDEDLAKIKRVGE 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ+ DD+LD G E+GK + D +N K T I ++ Sbjct: 212 LVGLAFQIKDDILDIYGNEKEIGKPLHSDEKNNKKTYITINGIEK 256 >gi|326776680|ref|ZP_08235945.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1] gi|326657013|gb|EGE41859.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1] Length = 347 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 5/211 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L LA A L + V A A+E H TLLHDDV+D+ RR + A V+ Sbjct: 62 GKAIRPALVLAAASALGGDPERAVRAAVAVELAHNFTLLHDDVIDEDTTRRHRPTAWAVF 121 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALS-LVAC--TLAEGELRQLSLSKNL--DV 156 G +++ GD +L+ A ++ E A A++ L +C L G+ + + ++ Sbjct: 122 GIPDAIITGDAMLALAQRLLAEDPHPAAARAVARLSSCIIELCAGQQADCAFEERGPEEI 181 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T ++ L + +KT L A + +L AG ++ +A+ +G G++FQL+DD++ G Sbjct: 182 TLDECLTMATAKTGALLGCACSLGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWG 241 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + GK +G D K +LPV+ A GT Sbjct: 242 DPDRTGKPVGADLAAHKKSLPVVAALTSGTP 272 >gi|328945558|gb|EGG39709.1| geranyltranstransferase [Streptococcus sanguinis SK1087] Length = 291 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 81/272 (29%), Positives = 134/272 (49%), Gaps = 34/272 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEF 73 +F +++ SD + +V+ Y + +GGKR+RP+L L A LE + H +A A+E Sbjct: 16 DFYRSQQVSSD---LSEVILYSVKAGGKRIRPLLLLELIQAFGLEL-AEAHYQVAAALEM 71 Query: 74 IHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQ-- 127 IHT +L+HDD+ RRG++ + +G ++L GD L + ++ E SQ Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVK 131 Query: 128 -EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + LSL A + +GE + +SL ED ++ +KT L + Sbjct: 132 VDLISELSLAAGSFGMVAGQVLDMQGEGQAISL--------EDLKNIHANKTGKLLTYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LI Q SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T P Sbjct: 184 VAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKK 269 L G KNF+ T+++ + + +L++ Sbjct: 244 AFL----GLDGAKNFFNQTLDEAVLILSDLEE 271 >gi|73667184|ref|YP_303200.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake] gi|72394325|gb|AAZ68602.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake] Length = 283 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 24/195 (12%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y IFS GK +RP L A A M + D + ++ A+E IH +L+HDD+ +D+ +R Sbjct: 44 IRYSIFSPGKHIRPFLVNAVAQMFDVNVDRTLPVSAAVEIIHVYSLIHDDLPGMDNEEIR 103 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF-------------CMVIETKSQEALEALSLVAC 138 RG+ ++ + ++L GD LL+ AF C +I+T + A+ ++ Sbjct: 104 RGQASSHKKFNEAVAILTGDALLTLAFEILSTINESPLIRCRIIKTLAH-AIGYQGMIQG 162 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + E +++K D+ E +HV+ KTA FSA E+ ++ N AL +YG Sbjct: 163 QILDTE----TIAK--DINEIQNIHVL--KTAQFFSAICELGGILGNASNIQLNALANYG 214 Query: 199 MNLGIAFQLVDDVLD 213 +NLG AFQ+ DD+ D Sbjct: 215 LNLGHAFQIKDDIAD 229 >gi|332362900|gb|EGJ40693.1| geranyltranstransferase [Streptococcus sanguinis SK49] Length = 291 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 34/262 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEF 73 +F +++ SD + +V+ Y + +GGKR+RP+L L A LE + H +A A+E Sbjct: 16 DFYRSQQVSSD---LTEVILYSVQAGGKRIRPLLLLELIQAFGLEL-AEAHYQVAAALEM 71 Query: 74 IHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQ-- 127 IHT +L+HDD+ RRG++ + +G ++L GD L + ++ E SQ Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQIK 131 Query: 128 -EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + LSL A + +GE + +SL ED + +KT L + Sbjct: 132 VDLISELSLAAGSFGMVAGQVLDMQGEGQAISL--------EDLKTIHANKTGKLLTYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LIA Q SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T P Sbjct: 184 VAAGLIAEAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTIND 259 L G KNF+ T+++ Sbjct: 244 AFL----GLDGAKNFFNQTLDE 261 >gi|262165140|ref|ZP_06032877.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] gi|262024856|gb|EEY43524.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] Length = 294 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 78/245 (31%), Positives = 118/245 (48%), Gaps = 14/245 (5%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L L RI + + ++Y + GGKR RP L T ML A A+E IH Sbjct: 18 LWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSELDTPASAVECIHAY 77 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 +L+HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 78 SLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDALQTLAFTILAEGTLSPAGETQRV 137 Query: 136 VAC-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGV 186 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG Sbjct: 138 AMIQALAEASGAQGMCLGQALDLAAENRLVSLEELETIHRNKTGALMRCAIRLGALAAGE 197 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + ++ L Y +G+AFQ+ DD+LD + +GK G D + K T P +L + Sbjct: 198 KGRAILPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQQLNKSTYPALLGLE-- 255 Query: 246 TKREK 250 REK Sbjct: 256 GAREK 260 >gi|289207601|ref|YP_003459667.1| polyprenyl synthetase [Thioalkalivibrio sp. K90mix] gi|288943232|gb|ADC70931.1| Polyprenyl synthetase [Thioalkalivibrio sp. K90mix] Length = 297 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 21/252 (8%) Query: 14 KVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++ ++ +R+ +D P + ++Y SGGKRLRP+L A D +A A Sbjct: 16 RIETVLDQRLAADSAPDPRLIEAMRYATLSGGKRLRPVLVYAAGATCGAPDDVLDAMAAA 75 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E +H +L+HDD+ +D+ LRRG+ + T++L GD L QA I T Sbjct: 76 VEMVHVYSLIHDDLPAMDNDDLRRGRPTCHRAFDEATAILAGDAL--QACAFEIMTAGVR 133 Query: 129 ALEALSLVACT-----------LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AL + + +A G+ L + K +D+ E + +H + KT L + Sbjct: 134 ALPGTAALDALAELAHAAGLHGMAGGQAIDLGACGKPIDLAELERMH--RLKTGALIRVS 191 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + + ++ GV L Y +G+AFQ+ DDVLD G+ +GK G D R K T Sbjct: 192 VRLGAIAGGVPGDALGHLTRYAECIGLAFQIRDDVLDVEGDPEVLGKACGADARLDKATF 251 Query: 237 PVILAFQRGTKR 248 P + + +R Sbjct: 252 PSLQGLEASRER 263 >gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata] gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata] Length = 329 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 46/252 (18%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDD 87 I + ++Y + +GGKR+RP+L +A ++ G+ + L ACA+E IHT +L+HDD+ Sbjct: 78 IHEAMRYSLLAGGKRVRPVLCIAACELV--GGEEFLALPAACAVEMIHTMSLIHDDLP-- 133 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 +G +VL GD LLS AF E + E E +S A GEL + Sbjct: 134 ------------FFGEDVAVLAGDALLSFAF----EHLATETPEIISPARVVRAIGELAK 177 Query: 148 LSLSKNL------DVTEE------------DYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 S+ L D+T E +++H+ KTAVL AA + ++ G N Sbjct: 178 AIGSEGLVAGQVVDLTSEGMDQNDVGLELLEFIHL--HKTAVLLEAATVLGAIFGGGTNE 235 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L+ + +G+ FQ+VDD+LD E+GK G+D K T P ++ G ++ Sbjct: 236 EIERLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLM----GLEKS 291 Query: 250 KNFWKSTINDGK 261 K+F + ++D + Sbjct: 292 KDFAEKLLSDAQ 303 >gi|172056944|ref|YP_001813404.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15] gi|171989465|gb|ACB60387.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15] Length = 289 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 80/234 (34%), Positives = 123/234 (52%), Gaps = 20/234 (8%) Query: 31 PDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHV--LLACAIEFIHTATLLHDDV 84 PD ++ Y + +GGKR+RP L A ++ Y D A A+E IHT +L+HDD+ Sbjct: 25 PDRLREAMLYSLDAGGKRVRPALIYA--VLDAYGVDRKTGDATAAALEMIHTYSLIHDDL 82 Query: 85 VDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVA 137 +RRG+ + + T++L GD LL+ AF ++ET + + LE L+ A Sbjct: 83 PAMDDDDMRRGRPTNHIEFDEATAILAGDALLTNAFTCLLETMAAAEVKVKLLERLAAAA 142 Query: 138 CTLAEGELRQLS--LSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 QL L + +++ + L I + KT L A+E ++AGV + + L Sbjct: 143 GAAGM-VGGQLDDMLGERGGISDAEELESIHRRKTGALLIFAVEAGGILAGVADEDLEQL 201 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 K YG +LGIAFQ+ DD+LD G+ +++GK +G D N K T P +L G KR Sbjct: 202 KRYGRHLGIAFQIQDDILDVTGDADKIGKPVGSDEGNDKATYPKLLGLD-GAKR 254 >gi|42519419|ref|NP_965349.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533] gi|41583707|gb|AAS09315.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533] Length = 288 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 129/256 (50%), Gaps = 12/256 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 L+D K +++ + + + ++++ ++ Y + +GGKRLRP+L LAT L ++ Sbjct: 3 LKDFQEKYTPQIDNFLKEHLVTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLETLNHKI 62 Query: 62 DNHVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + L +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL Sbjct: 63 EEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLLPLGI 122 Query: 119 CMVIETKSQEALEAL---SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS---KTAVL 172 + E + AL + ++ + G+ + + N D +E+ + + KT L Sbjct: 123 QWITEGSNSAALAIVISQAVGPNGMVGGQYLDIDTTNN-DSAKENAKMIDQMEWLKTGCL 181 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 A+++++++ AG +S L ++ G ++Q+ DD++D E GK +D G Sbjct: 182 IEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVETATEAGKATHKDATEG 241 Query: 233 KPTLPVILAFQRGTKR 248 K +L + K+ Sbjct: 242 KNNTLTLLGIEDSRKQ 257 >gi|319792406|ref|YP_004154046.1| polyprenyl synthetase [Variovorax paradoxus EPS] gi|315594869|gb|ADU35935.1| Polyprenyl synthetase [Variovorax paradoxus EPS] Length = 304 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 20/229 (8%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI---EFIHTATLLHDDV- 84 ++ D ++Y + GGKRLRP+L LA + E G N A E IH +L+HDD+ Sbjct: 40 LLGDAMRYAVLDGGKRLRPLLVLAAS---EAVGGNEAAALRAACAAELIHAYSLVHDDLP 96 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL--- 140 +D+ LRRGK + +G ++L GD L + AF + + + E A C L Sbjct: 97 CMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFEL-LAPEGDEIPAATQATLCRLLAR 155 Query: 141 -------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 A G+ L+ S + + E + + KT L ++E+ + V + A Sbjct: 156 AAGSQGMAGGQAIDLA-SVGIALNETQLREMHRLKTGALLQGSVEMGAACGNVSAAALAA 214 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 L+ YG +G+AFQ+VDD+LD + +GK G+D KPT +L Sbjct: 215 LRDYGAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSLLGL 263 >gi|227890284|ref|ZP_04008089.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200] gi|227849098|gb|EEJ59184.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200] Length = 288 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 129/256 (50%), Gaps = 12/256 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 L+D K +++ + + + ++++ ++ Y + +GGKRLRP+L LAT L ++ Sbjct: 3 LKDFQEKYTPQIDNFLKEHLVTEIDNLTFSKIMSYSVMAGGKRLRPLLFLATLETLNHKI 62 Query: 62 DNHVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + L +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL Sbjct: 63 EEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLLPLGI 122 Query: 119 CMVIETKSQEALEAL---SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS---KTAVL 172 + E + AL + ++ + G+ + + N D +E+ + + KT L Sbjct: 123 QWITEGSNSAALAIVISQAVGPNGMVGGQYLDIDTTNN-DSAKENAKMIDQMEWLKTGCL 181 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 A+++++++ AG +S L ++ G ++Q+ DD++D E GK +D G Sbjct: 182 IEASVKMAAIYAGATDSEFNRLDNFSKRFGRSYQIYDDLVDVVETATEAGKATHKDATEG 241 Query: 233 KPTLPVILAFQRGTKR 248 K +L + K+ Sbjct: 242 KNNTLTLLGIEASRKQ 257 >gi|225388185|ref|ZP_03757909.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme DSM 15981] gi|225045743|gb|EEG55989.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme DSM 15981] Length = 303 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 27/271 (9%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 K++E++ L + + + + Y + +GGKRLRPML + + GD +L C Sbjct: 16 KEIEQIIEPYLPEETGHQKTVLEAMNYSMKAGGKRLRPMLMQEVCRL--FTGD---VLDC 70 Query: 70 ------AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF--- 118 A+E IHT++L+HDD+ +DD LRRGK + +G VL GD L+ AF Sbjct: 71 VIPFMAAVEMIHTSSLVHDDLPCMDDDRLRRGKPSTWAEYGEDIGVLTGDALMMYAFETA 130 Query: 119 CMVIETK-SQEALEALSLVACTLAE---------GELRQLSLSKNLDVTEEDYLHVIKSK 168 ET + + A+ LA G+ + L+ + D+ + + + K Sbjct: 131 ARAFETSIDPDEISAIGRSIGILAHKTGAFGMIGGQTVDVELAGS-DIPRDKLDFIYRLK 189 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 T L A++ + +++ G + ++ ++G+AFQ+ DD+LD G E+GK G D Sbjct: 190 TGALLEASMLIGAVLGGAAEEDCKIVERLASHIGMAFQIQDDILDVTGSEAELGKPAGSD 249 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 RNGK T + ++ K + I D Sbjct: 250 ARNGKTTYVTLEGLEKAKKDVEQLSAQAIED 280 >gi|239990653|ref|ZP_04711317.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 11379] Length = 349 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 88/340 (25%), Positives = 152/340 (44%), Gaps = 38/340 (11%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIF-------------SG--GKRLRPMLTLATALM 56 +E+ ++ + S VE +P ++ + SG GK +RP L LA A Sbjct: 19 LERTRAVVDPHLRSAVESLPGAIRRIAMYHFGWQNADGTPASGQAGKAIRPALVLAAARA 78 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 L + + A A+E H TLLHDDV+D+ RR + A V+G +++ GD +L+ Sbjct: 79 LGGDPERAIRAAVAVELAHNFTLLHDDVIDEDTTRRHRPTAWAVFGVPDAIITGDAMLAL 138 Query: 117 AFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNL--DVTEEDYLHVIKSKTAV 171 A ++ E A A LS L G+ + + +VT ++ L + +KT Sbjct: 139 AQRLLAEDAHPAAAPAAARLSTCVIELCAGQQADCAFEERGPDEVTLDECLTMATAKTGA 198 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L A + +L AG ++ +A+ +G G++FQL+DD++ G+ + GK +G D Sbjct: 199 LLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDPDRTGKPVGADLSA 258 Query: 232 GKPTLPVILAFQRGTKREKN---FWKSTINDGKISVENLKKAFIIMRENR------ALVD 282 K +LPV+ A GT ++ +N + E + A + R D Sbjct: 259 HKKSLPVVAALTSGTPAAAELAALYRGPMN---TAAEVGRAADAVDRAGGRDWAQVCAAD 315 Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 RA+ + +A +PD S L+ + +F +R + Sbjct: 316 RMARAFHHLSRA------VPDPSAAGDLLALAEFVTRRTS 349 >gi|324993385|gb|EGC25305.1| geranyltranstransferase [Streptococcus sanguinis SK405] Length = 291 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 34/262 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEF 73 +F +++ SD + +V+ Y + +GGKR+RP+L L A LE + H +A A+E Sbjct: 16 DFYRSQQVSSD---LTEVILYSVQAGGKRIRPLLLLELIQAFGLEL-AEAHYQVAAALEM 71 Query: 74 IHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQ-- 127 IHT +L+HDD+ RRG++ + +G ++L GD L + ++ E SQ Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQIK 131 Query: 128 -EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + LSL A + +GE + +SL ED + +KT L + Sbjct: 132 VDLISELSLAAGSFGMVAGQVLDMQGEGQAISL--------EDLKTIHANKTGKLLTYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LIA Q SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T P Sbjct: 184 VAAGLIAEAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTIND 259 L G KNF+ T+++ Sbjct: 244 AFL----GLDGAKNFFNQTLDE 261 >gi|90420014|ref|ZP_01227923.1| putative geranylgeranyl pyrophosphate synthase [Aurantimonas manganoxydans SI85-9A1] gi|90336055|gb|EAS49803.1| putative geranylgeranyl pyrophosphate synthase [Aurantimonas manganoxydans SI85-9A1] Length = 318 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 114/218 (52%), Gaps = 21/218 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++ + + GKRLRPM+ TA L D V CA+E +H A+L+ DD+ +DD+ + Sbjct: 41 AIRESVLAPGKRLRPMMAALTAGDLGGDEDVAVDAGCAVEMVHAASLILDDLPCMDDATM 100 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEA-LEALSLVACT-----LAE 142 RRG+ AA + G +VL +LS A+ M+ +E S A LEA++++ L Sbjct: 101 RRGRPAAHVTHGEDVAVLSAIAILSGAYEMLARVEGLSPAARLEAVTVLTRAVGVEGLVG 160 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKS----KTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G+ L + E LH I + KT LF AA+E ++ AG + R L+ + Sbjct: 161 GQFADLRGGRA-----ERPLHEIAATNGRKTGALFLAAVETGAIAAGAGETTRAHLRGFA 215 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 LG AFQL+DD+LD +GK++ +D GK T+ Sbjct: 216 TELGHAFQLLDDLLDGGPSAATIGKDVNKD--AGKSTI 251 >gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330] Length = 295 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 117/228 (51%), Gaps = 14/228 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 + + + ++Y GGKRLRP+L LA + + A+E IH +L+HDD+ + Sbjct: 31 QTLHEAMRYSTLDGGKRLRPLLVLAASELGNQVQAACEAAMAAVECIHVYSLVHDDMPAM 90 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------A 137 D+ +LRRGK + +G T++LVGD L + AF ++ + L +V + Sbjct: 91 DNDSLRRGKPTCHVQFGEATALLVGDALQTLAFDILSTETELSTVRQLRMVKVLAQASGS 150 Query: 138 CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA-LK 195 +A G+ L ++ ++L TE +++H +K T L AA+ + L N + A L Sbjct: 151 LGMAGGQAVDLGNVGRDLSQTELEFMHSLK--TGALIRAAVALGGLSCPDLNDEQLAHLD 208 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 Y LG+AFQ++DDVLD + +GK G+D KPT ++ Q Sbjct: 209 VYASKLGLAFQVIDDVLDCEADTATLGKTAGKDADANKPTYVKLMGLQ 256 >gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113] gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113] Length = 296 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 13/233 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKRLRP+LT + + + A A+E IH +L+HDD+ +D+ Sbjct: 35 EAMRYAVLGGGKRLRPLLTYSAGMAVGVAEAALDAPASAVELIHAYSLVHDDLPSMDNDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVACT-----L 140 LRRG+ +G T++L GD L + AF ++ E S + + L L+A + Sbjct: 95 LRRGQPTCHKAFGETTALLAGDALQALAFRILAEPASTIPAENQINMLKLLAEAAGSRGM 154 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A G+ L S+ L ++E + +H +K+ + S L A Q+++ + L + Sbjct: 155 AGGQAIDLDSVGIQLTLSEMETMHRLKTGALIRASVLLGAWCQPAITQDTIEK-LDHFAQ 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +G+AFQ+ DDVLD + +GK G D KPT P +L + R ++ Sbjct: 214 CIGLAFQIQDDVLDVESDTATLGKPQGSDKAQDKPTYPSLLGLIQAKARAQSL 266 >gi|254455595|ref|ZP_05069024.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211] gi|207082597|gb|EDZ60023.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211] Length = 290 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 12/226 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +KY +F GGK++R + + M+ + + A+E IH TL+HDD+ +DD + Sbjct: 31 AMKYGLFPGGKKIRSKILIDIGSMMSIDYKTLIAIGAAVECIHAYTLIHDDLPCMDDDKI 90 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTL--A 141 RRGK + + +G T++L G+ L + A ++ +K + E ++ LS + L A Sbjct: 91 RRGKPSTHIKFGESTAILAGNSLQTMACEILTSSKLKIGDKIKIELIKKLSECSGHLGVA 150 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G+ LS K V+++ + + KT LFS ++I N + + G + Sbjct: 151 GGQYLDLSYEKR-KVSKKKIIEMEIKKTGKLFSFCCVAPAIIKKKDNQEIKFFEDLGSKI 209 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 G+ FQ+ DD++D+ G GK G+D + GK TL ++ + K Sbjct: 210 GLLFQIADDLIDFHGNSKSAGKQTGKDQKKGKATLISLMGYTNAVK 255 >gi|325688242|gb|EGD30261.1| geranyltranstransferase [Streptococcus sanguinis SK72] Length = 291 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 34/262 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEF 73 +F +++ SD + +V+ Y + +GGKR+RP+L L A LE + H +A A+E Sbjct: 16 DFYRSQQVLSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLEL-AEAHYQVAAALEM 71 Query: 74 IHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQ-- 127 IHT +L+HDD+ RRG++ + +G ++L GD L + ++ E SQ Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARSELPSQVK 131 Query: 128 -EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + LSL A + +GE + +SL ED ++ +KT L + Sbjct: 132 VDLIYELSLAAGSFGMVAGQVLDMQGEGQAISL--------EDLKNIHANKTGKLLTYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LIA V+ SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T P Sbjct: 184 VAAGLIAEVEQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTIND 259 L G KNF+ T+++ Sbjct: 244 AFL----GLDGAKNFFNQTLDE 261 >gi|313118274|sp|Q9LRR0|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8, chloroplastic; Short=GGPP synthase 8; Short=GGPS8; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8; AltName: Full=Dimethylallyltranstransferase 8; AltName: Full=Farnesyl diphosphate synthase 8; AltName: Full=Farnesyltranstransferase 8; AltName: Full=Geranyltranstransferase 8; Flags: Precursor Length = 361 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 76/243 (31%), Positives = 126/243 (51%), Gaps = 26/243 (10%) Query: 26 DVEMIP--------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 DV ++P + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT+ Sbjct: 82 DVSIVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTS 141 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALS 134 +L+HDD+ +D++ LRRGK V+G +VL GD LL+ AF M + + A E + Sbjct: 142 SLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMI 201 Query: 135 LVACTLAEG-ELRQLSLSKNLDVTEE------------DYLHVIKSKTAVLFSAALEVSS 181 LA + L + +D++ E +++H+ KTA L AA + + Sbjct: 202 RAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHL--HKTAALLEAAAVIGA 259 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ G + L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P ++ Sbjct: 260 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIG 319 Query: 242 FQR 244 +R Sbjct: 320 LER 322 >gi|71898704|ref|ZP_00680873.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1] gi|71731469|gb|EAO33531.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1] Length = 291 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 16/223 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + SGGKR+RP+L A + + A A+E IH +L+HDD+ +DD L Sbjct: 34 AMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------- 143 RRG+ + + T++L GD L + AF + + + +L L T A G Sbjct: 94 RRGRPTVHIAFDEATAILTGDALQTLAFECLADAPADTSLRIAWLQTLTHAAGVAGMCGG 153 Query: 144 ---ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 ++ S+ L E +H +KS T L AA+ + +L +L ++ Sbjct: 154 QALDIDATGQSQTLKALE--VMHALKSGT--LMRAAVRMGALAGDPSAEDLHSLDTFAAT 209 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+AFQ+ DD+LD ++GK G+D K T P +L+ + Sbjct: 210 LGLAFQVRDDILDIESSSEQLGKTAGKDAIQQKSTFPALLSVE 252 >gi|320157198|ref|YP_004189577.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio vulnificus MO6-24/O] gi|319932510|gb|ADV87374.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O] Length = 294 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 12/253 (4%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L L ++ + + ++Y + GGKR RP L AT ML + A AIE IH Sbjct: 18 LWLDKLPHQNQALIQAMRYGLVLGGKRARPFLVYATGEMLGCSQEQLDTPASAIECIHAY 77 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQEA 129 +L+HDD+ +DD LRRG+ + + T++L GD L + AF ++ E ++Q Sbjct: 78 SLIHDDLPAMDDDELRRGQPTCHVKFDEATAILTGDALQTLAFTILAEGTLSPDGETQRV 137 Query: 130 LEALSLVACTLAEGELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +L + A+G +L ++N VT E+ + ++KT L A+ + +L AG Sbjct: 138 AMIQALAQASGAQGMCIGQALDLAAENRAVTLEELEEIHRNKTGALIRCAVRLGALAAGE 197 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + ++ L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L + Sbjct: 198 KGLAILPQLEKYSTAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLLGLEGA 257 Query: 246 TKREKNFWKSTIN 258 ++ + Sbjct: 258 MEKAHTLLHEALQ 270 >gi|239944197|ref|ZP_04696134.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] Length = 347 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 88/340 (25%), Positives = 152/340 (44%), Gaps = 38/340 (11%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIF-------------SG--GKRLRPMLTLATALM 56 +E+ ++ + S VE +P ++ + SG GK +RP L LA A Sbjct: 17 LERTRAVVDPHLRSAVESLPGAIRRIAMYHFGWQNADGTPASGQAGKAIRPALVLAAARA 76 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 L + + A A+E H TLLHDDV+D+ RR + A V+G +++ GD +L+ Sbjct: 77 LGGDPERAIRAAVAVELAHNFTLLHDDVIDEDTTRRHRPTAWAVFGVPDAIITGDAMLAL 136 Query: 117 AFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNL--DVTEEDYLHVIKSKTAV 171 A ++ E A A LS L G+ + + +VT ++ L + +KT Sbjct: 137 AQRLLAEDAHPAAAPAAARLSTCVIELCAGQQADCAFEERGPDEVTLDECLTMATAKTGA 196 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L A + +L AG ++ +A+ +G G++FQL+DD++ G+ + GK +G D Sbjct: 197 LLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDPDRTGKPVGADLSA 256 Query: 232 GKPTLPVILAFQRGTKREKN---FWKSTINDGKISVENLKKAFIIMRENR------ALVD 282 K +LPV+ A GT ++ +N + E + A + R D Sbjct: 257 HKKSLPVVAALTSGTPAAAELAALYRGPMN---TAAEVGRAADAVDRAGGRDWAQVCAAD 313 Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 RA+ + +A +PD S L+ + +F +R + Sbjct: 314 RMARAFHHLSRA------VPDPSAAGDLLALAEFVTRRTS 347 >gi|153814704|ref|ZP_01967372.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756] gi|317500234|ref|ZP_07958464.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087536|ref|ZP_08336468.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847735|gb|EDK24653.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756] gi|316898360|gb|EFV20401.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|330401754|gb|EGG81332.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium 3_1_46FAA] Length = 296 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 14/221 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 ++I + ++Y + +GGKRLRPML T + +G AIE IHT +L+HDD+ + Sbjct: 30 QIIEEAMEYSLMAGGKRLRPMLMKETFDLFGGKGGVIEPFMAAIEMIHTYSLVHDDLPAM 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEAL---EALSLVACT 139 D+ RRG+ +V+G +L GD LL+ AF C ET Q ++ AL ++A Sbjct: 90 DNDDYRRGRKTTHVVYGEDMGILTGDALLNYAFETACSAFETDPQNSILIGRALKILAGK 149 Query: 140 -----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G++ + S ++ E + + KT L A++ + +++AG + + Sbjct: 150 AGIYGMIGGQVVDVR-SAGCKISGELLAFIYRLKTGALIEASVMIGAVLAGAKEEEIGKM 208 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + +G+AFQ+ DD+LD +GK + D +N K T Sbjct: 209 EEIAGKIGLAFQIQDDILDVTSTTEILGKPVHSDEKNEKTT 249 >gi|92116242|ref|YP_575971.1| polyprenyl synthetase [Nitrobacter hamburgensis X14] gi|91799136|gb|ABE61511.1| farnesyl-diphosphate synthase [Nitrobacter hamburgensis X14] Length = 308 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 14/234 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y GGKRLRP L + ++ + D+ +L A+E IH +L+HDD+ +D+S Sbjct: 46 DAMRYSSLGGGKRLRPFLVVESSAVFGVPRDSALLAGAALECIHCYSLIHDDLPAMDNSD 105 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVACTLAEGELRQ 147 LRRG+ + T++L GD LL+ AF ++ E A+ L A A G + Sbjct: 106 LRRGRPTLHKTADDATAILAGDGLLTLAFDIITRDEVHQDPAVRLLLTRALARAAG-IGG 164 Query: 148 LSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + LD+ E D + + KT L +L+ QAL +YG Sbjct: 165 MVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRFGCISGALLGQASQKDYQALDAYG 224 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 LG AFQ+ DD+LD G+ +GK G D GK T L KR ++ Sbjct: 225 RALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKKRVRDL 278 >gi|291525241|emb|CBK90828.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale DSM 17629] gi|291529300|emb|CBK94886.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale M104/1] Length = 307 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 132/253 (52%), Gaps = 22/253 (8%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 + +E+L K +E +N ++ K + ++ +I + + Y + +GGKRLRP+L T M Sbjct: 11 QFMEELQQK-VEHINDVLEKFLPAEEGQQRIIFEAMNYSVRAGGKRLRPILMEETYHM-- 67 Query: 59 YRGDNHVL--LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 + G + V+ AIE IHT +L+HDD+ +D+ RRGK V+G +L GD LL Sbjct: 68 FGGSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALL 127 Query: 115 -------SQAFCM-VIETKSQEALEALSLVACT--LAEGELRQLSLSKNLD--VTEEDYL 162 ++AF M V +T+ A L+ A + G++ + K+ D +T E Sbjct: 128 NLAYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKLD 187 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + + KT L +++ + +++AG + ++ LG+AFQ+ DDVLD + +G Sbjct: 188 FIYRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTSTLEVLG 247 Query: 223 KNIGEDFRNGKPT 235 K +G D +N K T Sbjct: 248 KPVGSDEKNNKAT 260 >gi|329667056|gb|AEB93004.1| geranyltranstransferase [Lactobacillus johnsonii DPC 6026] Length = 288 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 128/256 (50%), Gaps = 12/256 (4%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 L+D K +++ + + + ++++ ++ Y + +GGKRLRP+L LAT L ++ Sbjct: 3 LKDFQEKYTPQIDNFLKEHLVTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLETLNHKI 62 Query: 62 DNHVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + L +AC IE IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL Sbjct: 63 EEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLLPLGI 122 Query: 119 CMVIETKSQEALEAL---SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS---KTAVL 172 + E + AL + ++ + G+ + + N D +E+ + + KT L Sbjct: 123 QWITEGSNSAALAIVISQAVGPNGMVGGQYLDIDTTNN-DSAKENAKMIDQMEWLKTGCL 181 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 A++ ++++ AG +S L ++ G ++Q+ DD++D E GK +D G Sbjct: 182 IEASVRMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVETATEAGKATHKDATEG 241 Query: 233 KPTLPVILAFQRGTKR 248 K +L + K+ Sbjct: 242 KNNTLTLLGIEASRKQ 257 >gi|117618681|ref|YP_857809.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560088|gb|ABK37036.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 296 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 19/256 (7%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYR 60 L+D + ++++ + ++ S M P D ++Y + GGKR+RP L A ML + Sbjct: 3 LDDFSRLHRQRIDDCLSAQLESLPAMAPRLRDAMRYGLLLGGKRVRPFLVYAVGEMLGVK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + A A+E IH +LLHDD+ +D+ LRRG+ + T++L GD L + AF Sbjct: 63 NELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLAF 122 Query: 119 CMVIETKSQEALEA-----LSLVA-----CTLAEGELRQLSL-SKNLDVTEEDYLHVIKS 167 ++ + ++L A LS +A + G+ L + + + E + +H + Sbjct: 123 TILADHPMPDSLLANRVRMLSRLARASGYLGMCGGQALDLQAEGRQISIAELEQVH--RH 180 Query: 168 KTAVLFSAALEVSSLI-AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KT L A+ + +L A V + AL++Y +G+AFQ+ DD+LD G+ +GK G Sbjct: 181 KTGALIECAVALGALCKADVDETTLSALQTYAAAIGLAFQVQDDILDITGDTATLGKRQG 240 Query: 227 EDFRNGKPTLPVILAF 242 D K T P +L Sbjct: 241 SDLAQEKSTYPALLGL 256 >gi|58582922|ref|YP_201938.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58427516|gb|AAW76553.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 291 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 8/218 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +++ + GGKR+RP+L A+ + D A A+E IHT +L+HDD+ +DD AL Sbjct: 34 AMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHTYSLVHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTLAEGEL 145 RRG+ + + T++L GD L ++AF ++ + +++L+ A Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTRAFELLAAASASAELRVGWMQSLATAAGAAGMCGG 153 Query: 146 RQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L + + +D + KT L A++ + +L G + +Q L + LG+A Sbjct: 154 QALDIDATGQLQPLQDLQRMHALKTGALIRASVHMGALTGGAATADQQRLDEFADALGLA 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 FQ+ DD+LD ++GK G+D K T P +L Sbjct: 214 FQVRDDILDVESSSAQLGKTAGKDAAQSKSTYPALLGM 251 >gi|313124102|ref|YP_004034361.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280665|gb|ADQ61384.1| Farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 287 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 22/249 (8%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHD 82 SD +++ Y + +GGKRLRP+L LAT AL +E + V AC IE IHT +L+HD Sbjct: 27 SDDSRFAEIMAYSVMAGGKRLRPLLFLATLDALGVEIT-EKEVQAACGIELIHTYSLIHD 85 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEA 132 D+ +D+ RRG++ + WG ++L GD L + + + EA+ Sbjct: 86 DLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQPLGIQWIAQAEHNWKLVEIITEAVGP 145 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +VA G+ + + N D +EE H+ KT L A++++++ +A + Q Sbjct: 146 KGMVA-----GQYLDIDTTNNEDSSEEVIDHMEWLKTGCLILASVQMATALAACPDQQAQ 200 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 ++ + G ++QL DD++D E GK +D GK +L G + +N Sbjct: 201 KYLAFAKHFGRSYQLYDDLVDIVESQEEAGKATHKDQEVGKNNSLTML----GAEATRNE 256 Query: 253 WKSTINDGK 261 K I GK Sbjct: 257 LKQLIKKGK 265 >gi|291447668|ref|ZP_06587058.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] gi|291350615|gb|EFE77519.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] Length = 381 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 88/340 (25%), Positives = 152/340 (44%), Gaps = 38/340 (11%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIF-------------SG--GKRLRPMLTLATALM 56 +E+ ++ + S VE +P ++ + SG GK +RP L LA A Sbjct: 51 LERTRAVVDPHLRSAVESLPGAIRRIAMYHFGWQNADGTPASGQAGKAIRPALVLAAARA 110 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 L + + A A+E H TLLHDDV+D+ RR + A V+G +++ GD +L+ Sbjct: 111 LGGDPERAIRAAVAVELAHNFTLLHDDVIDEDTTRRHRPTAWAVFGVPDAIITGDAMLAL 170 Query: 117 AFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNL--DVTEEDYLHVIKSKTAV 171 A ++ E A A LS L G+ + + +VT ++ L + +KT Sbjct: 171 AQRLLAEDAHPAAAPAAARLSTCVIELCAGQQADCAFEERGPDEVTLDECLTMATAKTGA 230 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L A + +L AG ++ +A+ +G G++FQL+DD++ G+ + GK +G D Sbjct: 231 LLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDPDRTGKPVGADLSA 290 Query: 232 GKPTLPVILAFQRGTKREKN---FWKSTINDGKISVENLKKAFIIMRENR------ALVD 282 K +LPV+ A GT ++ +N + E + A + R D Sbjct: 291 HKKSLPVVAALTSGTPAAAELAALYRGPMN---TAAEVGRAADAVDRAGGRDWAQVCAAD 347 Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 RA+ + +A +PD S L+ + +F +R + Sbjct: 348 RMARAFHHLSRA------VPDPSAAGDLLALAEFVTRRTS 381 >gi|86359590|ref|YP_471482.1| geranyltranstransferase protein [Rhizobium etli CFN 42] gi|86283692|gb|ABC92755.1| geranyltranstransferase protein [Rhizobium etli CFN 42] Length = 331 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 113/220 (51%), Gaps = 12/220 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + Y + +GGKRLRP L +A +L + + A+E +H +L+HDD+ Sbjct: 67 ETLRSAMHYAVLNGGKRLRPFLVAESAALLGGDAQAALRIGAALECVHCYSLVHDDLPAM 126 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVACTLAEG 143 +RRGK + + T++L GD LL+ AF +V ET ++ +A SLV Sbjct: 127 DDDDMRRGKPTVHVKFDEATAILAGDSLLTYAFDIVAAPETALPDSSKA-SLVLALARAA 185 Query: 144 ELRQLSLSKNLDVTEE----DYLHVIK---SKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L ++ + LD+ E D +I+ KT L A E ++IAG RQ L++ Sbjct: 186 GLGGMAGGQALDLAAEKKAPDETGIIRLQAMKTGALIRFACEAGAIIAGSPQDDRQRLRA 245 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +G +G+AFQL DD+LD + MGK G+D GK TL Sbjct: 246 FGEKIGLAFQLADDILDLTSDAATMGKATGKDAARGKGTL 285 >gi|118586761|ref|ZP_01544198.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus oeni ATCC BAA-1163] gi|118432849|gb|EAV39578.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus oeni ATCC BAA-1163] Length = 278 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 24/223 (10%) Query: 33 VVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 ++ Y + S GKRLRP+LTLAT A D+ + A A+EF+H +L+HDD+ +DD Sbjct: 35 MITYALNSTGKRLRPLLTLATFAAAGNVINDSTIEAATAVEFVHAYSLVHDDLPEMDDDT 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------ 143 RR + + +G +VLVGD LL++AF + E++ + LA G Sbjct: 95 KRRNQSSTWKKFGVGNAVLVGDGLLTEAFKKISNLSLPESIRLRLIYNLALAAGPDNMVR 154 Query: 144 --ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + S K + + +++H++K T L + A ++AG+ + +AL YG NL Sbjct: 155 GQQYDLFSQDKVESIDDLEFIHLMK--TGALMTYAATAGGILAGLSDDKLRALNIYGANL 212 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 GIAFQ+ DD+ ++I +D K + P ++ Q+ Sbjct: 213 GIAFQIKDDL-----------RDIKQDEEENKKSFPRLIGVQK 244 >gi|238924568|ref|YP_002938084.1| geranyltranstransferase [Eubacterium rectale ATCC 33656] gi|238876243|gb|ACR75950.1| geranyltranstransferase [Eubacterium rectale ATCC 33656] Length = 307 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 18/223 (8%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV-- 84 +I + + Y + +GGKRLRP+L T M + G + V+ AIE IHT +L+HDD+ Sbjct: 40 IIFEAMNYSVRAGGKRLRPILMEETYHM--FGGSSAVIEPFMAAIEMIHTYSLVHDDLPA 97 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLL-------SQAFCM-VIETKSQEALEALSLV 136 +D+ RRGK V+G +L GD LL ++AF M V +T+ A L+ Sbjct: 98 MDNDEYRRGKKTTHAVYGEAMGILAGDALLNLAYETAAKAFDMEVADTRVARAFAVLAKK 157 Query: 137 ACT--LAEGELRQLSLSKNLD--VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 A + G++ + K+ D +T E + + KT L +++ + +++AG + Sbjct: 158 AGVYGMVGGQVVDVESEKSDDCSITREKLDFIYRLKTGALIESSMMIGAILAGASSDEVS 217 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++ LG+AFQ+ DDVLD + +GK +G D +N K T Sbjct: 218 RVEQIAAKLGLAFQIQDDVLDVTSTLEVLGKPVGSDEKNNKAT 260 >gi|319781104|ref|YP_004140580.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166992|gb|ADV10530.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 305 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 19/238 (7%) Query: 18 LILKRICSDVEMI-----PD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 ++L+R+ D + PD +++ + +GGKRLRP L + +A + G+ + +A Sbjct: 22 VLLRRLLDDRALSGEIARPDRLMAAMRHGVLNGGKRLRPFLVMESAALFSADGEAALRVA 81 Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETK 125 A+E +H +L+HDD+ LRRG+ + T++L GD LL+ AF ++ E+ Sbjct: 82 AALECVHCYSLIHDDLPAMDDDDLRRGQPTVHKAFDEATAILAGDALLTLAFDIIAGEST 141 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDV----TEEDYLHVIK---SKTAVLFSAALE 178 + A +LV + + LD+ T D +I+ KT L A E Sbjct: 142 ALPAERRAALVLALARAAGAGGMVGGQKLDLEAEQTPPDEAGIIRLQAMKTGALIRFACE 201 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +LIAG R+ L +G +G+AFQL DD+LD G+ ++MGK G+D GK TL Sbjct: 202 AGALIAGAPADDRERLAEFGSAIGLAFQLADDLLDLTGDASQMGKATGKDAAAGKATL 259 >gi|300313126|ref|YP_003777218.1| geranyltranstransferase [Herbaspirillum seropedicae SmR1] gi|300075911|gb|ADJ65310.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Herbaspirillum seropedicae SmR1] Length = 311 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 26/248 (10%) Query: 19 ILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +L R ++P + ++Y GGKR+RP+L A + + A A+E I Sbjct: 26 VLNRFLPSASVVPARLHEAMRYTAMDGGKRVRPLLVYAAGELFDTPRALLERAAAAVEMI 85 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEA 129 H +L+HDD+ +DD ALRRGK + + T++LVGD L +QAF +E+++ A Sbjct: 86 HVYSLVHDDMPCMDDDALRRGKPTVHIRYDEATALLVGDALQAQAFDTLAAPLESEAGSA 145 Query: 130 --------LEALSLVA-----CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSA 175 L + L+A + G+ L S+ L + E + +H + KT L A Sbjct: 146 DAGLPARQLRMVKLLAEAAGSVGMCGGQAIDLASVGMTLSLAELEQMH--RLKTGALLRA 203 Query: 176 ALEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A+ + +L + A L Y +G+AFQ+VDD+LD + +GK G+D + KP Sbjct: 204 AVLLGALGGKALTAAESAALDDYARAIGLAFQVVDDILDATADSATLGKTAGKDAADNKP 263 Query: 235 TLPVILAF 242 T IL Sbjct: 264 TYVSILGL 271 >gi|116491232|ref|YP_810776.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1] gi|290890777|ref|ZP_06553844.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429] gi|116091957|gb|ABJ57111.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1] gi|290479549|gb|EFD88206.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429] Length = 275 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 24/223 (10%) Query: 33 VVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 ++ Y + S GKRLRP+LTLAT A D+ + A A+EF+H +L+HDD+ +DD Sbjct: 32 MITYALNSTGKRLRPLLTLATFAAAGNVINDSTIEAATAVEFVHAYSLVHDDLPEMDDDT 91 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------ 143 RR + + +G +VLVGD LL++AF + E++ + LA G Sbjct: 92 KRRNQSSTWKKFGVGNAVLVGDGLLTEAFKKISNLSLPESIRLRLIYNLALAAGPDNMVR 151 Query: 144 --ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + S K + + +++H++K T L + A ++AG+ + +AL YG NL Sbjct: 152 GQQYDLFSQDKVESIDDLEFIHLMK--TGALMTYAATAGGILAGLSDDKLRALNIYGANL 209 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 GIAFQ+ DD+ D I +D K + P ++ Q+ Sbjct: 210 GIAFQIKDDLRD-----------IKQDEEENKKSFPRLIGVQK 241 >gi|167855502|ref|ZP_02478265.1| geranyltranstransferase [Haemophilus parasuis 29755] gi|167853368|gb|EDS24619.1| geranyltranstransferase [Haemophilus parasuis 29755] Length = 297 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 24/266 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D + Y + GGKR+RP L AT ML A A+E IH +L+HDD+ +D+ Sbjct: 36 DAMSYAVLLGGKRVRPFLIYATGKMLGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDT 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRGK + + T++L GD L S AF ++ S A + ++ + + + Sbjct: 96 LRRGKPTCHIAFDEATAILAGDALQSFAFELLAFDPSLTAEQKVAQMQWLAKSAGAKGMC 155 Query: 150 LSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVS-SLIAGVQ-NSVRQALKSYGMN 200 L ++LD+ E D L I ++KT L A++ + +L A Q + ++Q L Y Sbjct: 156 LGQSLDLQSEHKAIALDELERIHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAKA 215 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+AFQ+ DD+LD G +GK G D K T P +L + ++ ++ +++ + Sbjct: 216 IGLAFQVQDDILDVIGNSEVIGKTAGSDQALDKSTYPKLLGLEGAKQKAESLYQTALK-- 273 Query: 261 KISVENLK---------KAFIIMREN 277 ++E L FI+ REN Sbjct: 274 --ALETLPFDTTALVALAEFIVKREN 297 >gi|104774286|ref|YP_619266.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514371|ref|YP_813277.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423367|emb|CAI98223.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093686|gb|ABJ58839.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126073|gb|ADY85403.1| Geranylgeranyl diphosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 287 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 22/249 (8%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHD 82 SD +++ Y + +GGKRLRP+L LAT AL +E + V AC IE IHT +L+HD Sbjct: 27 SDDPRFAEIMAYSVMAGGKRLRPLLFLATLDALGVEIT-EKEVQAACGIELIHTYSLIHD 85 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEA 132 D+ +D+ RRG++ + WG ++L GD L + + + EA+ Sbjct: 86 DLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQPLGIQWIAQAEHNWKLVEIITEAVGP 145 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +VA G+ + + N D +EE H+ KT L A++++++ +A + Q Sbjct: 146 KGMVA-----GQYLDIDTTNNEDSSEEVIDHMEWLKTGCLILASVQMATALAACPDQQAQ 200 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 ++ + G ++QL DD++D E GK +D GK +L G + +N Sbjct: 201 KYLAFAKHFGRSYQLYDDLVDIVESQEEAGKATHKDQEVGKNNSLTML----GAEATRNE 256 Query: 253 WKSTINDGK 261 K I GK Sbjct: 257 LKQLIEKGK 265 >gi|163797801|ref|ZP_02191747.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] gi|159176923|gb|EDP61489.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] Length = 295 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 125/249 (50%), Gaps = 18/249 (7%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +D+E++ L+L + + +++ F+GGKRLRP L + +A +A Sbjct: 13 EDVERMMDLLLPQPEGAEARLYSAMRHSAFAGGKRLRPFLVMQSARQFGVDRRCAARVAA 72 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETK 125 A+EF+HT +L+HDD+ +DD+ +RRG+ + + T++L GD L + AF ++ ET Sbjct: 73 AVEFMHTYSLIHDDLPAMDDADMRRGRTSCHKEFDEATAILAGDALQALAFETLVMPETH 132 Query: 126 SQEALEALSLVACTLAEGE--------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 S A+ A + A G + L+ S +D+ L +K+ FSA Sbjct: 133 SDPAVRAELVRDLARASGGRGMCGGQMMDLLAESTEMDIGAITRLQRLKTGEMFAFSA-- 190 Query: 178 EVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 VS I G + R AL +Y G+AFQ+VDD+LD G+ +GK G D GK T Sbjct: 191 -VSGAILG-KGPYRAYMALHNYAQEFGLAFQIVDDLLDATGDSEWIGKPTGRDAEAGKAT 248 Query: 236 LPVILAFQR 244 +L +R Sbjct: 249 FVSVLGAER 257 >gi|289672640|ref|ZP_06493530.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae FF5] Length = 295 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 16/239 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 + K ++E + + ++Y + +GGKR+RP+L A L ++ ACA+E IH + Sbjct: 20 LFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYS 79 Query: 79 LLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALS 134 L+H +DD LRRG+ + ++L GD L S AF ++ S++A L Sbjct: 80 LVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQ 139 Query: 135 LV-ACTLAEGELRQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +V A A G + S+ LD +Y+H + KT L A++ + +L +G Sbjct: 140 MVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASG 197 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + R AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 198 HADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|258621633|ref|ZP_05716665.1| geranyltranstransferase [Vibrio mimicus VM573] gi|258586105|gb|EEW10822.1| geranyltranstransferase [Vibrio mimicus VM573] Length = 294 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 78/245 (31%), Positives = 118/245 (48%), Gaps = 14/245 (5%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L L RI + + ++Y + GGKR RP L T ML A A+E IH Sbjct: 18 LWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSELDTPASAVECIHAY 77 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 +L+HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 78 SLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDALQTLAFTILAEGTLSPAGETQRV 137 Query: 136 VAC-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGV 186 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG Sbjct: 138 AMIQALAEASGAQGMCLGQALDLAAENRLVSLEELETIHRNKTGALMRCAIRLGALSAGE 197 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + ++ L Y +G+AFQ+ DD+LD + +GK G D + K T P +L + Sbjct: 198 KGRAILPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQQLNKSTYPALLGLE-- 255 Query: 246 TKREK 250 REK Sbjct: 256 GAREK 260 >gi|29829539|ref|NP_824173.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] gi|29606647|dbj|BAC70708.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] Length = 337 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 3/209 (1%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGK +RP L L +A + + A A+E +H +LLHDD++D RR + Sbjct: 51 GGGKAVRPALALLSAQAAGAPAETGLPGAVAVELVHNFSLLHDDLMDGDEERRHRRTVWT 110 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 +WG ++L GD LL+ A ++++ A L+ L G+++ ++ + V Sbjct: 111 LWGASGAILTGDALLALAQEVLLDCGLPTGAAAARLLARTTRDLIRGQVQDVAFERRAHV 170 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 E+ + + KT L SA+ + +++AG + AL YG +G+AFQL DDVL G Sbjct: 171 PIEECVDMAAGKTGALLSASAAIGAVLAGAPVTTVDALALYGQQVGLAFQLTDDVLGIWG 230 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + GK++ D R K +LPV A +G Sbjct: 231 DPAVTGKSVHSDLRARKKSLPVTYALNQG 259 >gi|320103326|ref|YP_004178917.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644] gi|319750608|gb|ADV62368.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644] Length = 336 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 15/234 (6%) Query: 33 VVKYLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA- 89 +Y GGK LRP LTL A A+ + +N + ACA+E +H +L+HDD+ Sbjct: 74 AARYSTLGGGKLLRPKLTLLAAEAVGGDDAIENALAAACAVELVHAYSLVHDDLPAMDDD 133 Query: 90 -LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG+ + + T++L GD LL+ AF V+ + A A + V R + Sbjct: 134 DLRRGRPTTHVEFDEATAILAGDGLLTLAFGAVV-AGVRPAERAAACVGILAEAAGFRGM 192 Query: 149 SLSKNLDVTEE---------DYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + D+ E + L I KT L A+L + + +G + AL YG Sbjct: 193 VGGQMADLQAESIPREQGSVELLEAIHLRKTGALLRASLTMGAAASGANAELTTALDEYG 252 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 LG+AFQ+ DD+LD G+ + GK +G+D GK T P L + +R ++ Sbjct: 253 RALGLAFQIQDDLLDATGDPAKTGKKVGKDLELGKWTYPAFLGVEESRRRARSL 306 >gi|256545252|ref|ZP_05472617.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170] gi|256399079|gb|EEU12691.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170] Length = 277 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 109/190 (57%), Gaps = 14/190 (7%) Query: 40 SGGKRLRPMLTLATALMLEYRG---DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGK 94 GKR+RP++ L T ML G + + L+ A+E +H +L+HDD+ +D+ RRGK Sbjct: 40 DSGKRIRPVVFLETIKMLLGEGSVDEKLIDLSLALEMVHAYSLVHDDMPCMDNDDYRRGK 99 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVA--CT---LAEGELRQ 147 + +G ++LVGD LLS AF ++++ Q LEA +A C + +G++ Sbjct: 100 LTVHKKYGEDLAILVGDSLLSYAFEIILDLSIYDQRFLEAGKYLAKACGKDGMIKGQVFD 159 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + K+ ++ E L V K+KTA LF AA+ +++L A V+ + L++Y LG+AFQL Sbjct: 160 IKSKKDENI--EYILDVYKNKTARLFMAAIMMAALYANVEKDKLEKLENYAYYLGLAFQL 217 Query: 208 VDDVLDYRGE 217 DD+LD E Sbjct: 218 QDDILDKYDE 227 >gi|182415631|ref|YP_001820697.1| polyprenyl synthetase [Opitutus terrae PB90-1] gi|177842845|gb|ACB77097.1| Polyprenyl synthetase [Opitutus terrae PB90-1] Length = 325 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 82/293 (27%), Positives = 137/293 (46%), Gaps = 48/293 (16%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-----------------------LA 68 + ++Y + +GGKRLRP+L LA+A + G + L A Sbjct: 34 EAMRYSLQAGGKRLRPVLLLASAELCGGSGHSPSLQQSATPEPPAGRRGDLVTALALPAA 93 Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 AIE +HT +L+HDD+ LRRG+ A + T++L GD LL+ AF ++ E + Sbjct: 94 VAIECLHTYSLIHDDLPCMDDDDLRRGRPTAHKAFDEATALLAGDALLTHAFALLAENYA 153 Query: 127 QEALEALSLV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 + A++L+ + L G++ L K D T E+ + +KTA + A+L Sbjct: 154 SQPALAMALIRELADAAGSRRLIGGQMEDLLAEKKADATAEELEFIHLNKTAAMIEASLV 213 Query: 179 VSSLIA--------GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 + I G AL++ G +LG+AFQ++DDVLD + +GK G+D R Sbjct: 214 MGGWIGLHAQTAAPGALPPEITALRAAGRHLGLAFQIIDDVLDATADRATLGKTPGKDAR 273 Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283 GK T + G R + F + + ++ +L++ + AL+D+ Sbjct: 274 AGKTTFVSL----HGLDRSRQFAREHTAAARQALASLEREHAFL---DALIDS 319 >gi|71892019|ref|YP_277749.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796125|gb|AAZ40876.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 306 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 19/245 (7%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD-- 83 DV ++ ++Y + GGKRLRP L T + R N A AIE IH +L+HDD Sbjct: 32 DVSLLMQAIRYSVLLGGKRLRPFLVYQTGKLFGIRSSNLNAPAAAIECIHAYSLIHDDLP 91 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEAL-SLVA 137 ++D+ LRRG + +G +VL GD L + AF ++ E Q+ L+ + +L + Sbjct: 92 IMDNDKLRRGHPTCHVKFGESIAVLAGDALHTLAFTILSEAHMPTITDQDRLKMIATLAS 151 Query: 138 CTLAEGELRQLSL------SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ--NS 189 + A G SL +KN+ T+ + ++ + KT L AA+ + +L AG + + Sbjct: 152 ASGANGMCLGQSLDLINKNNKNISATQLETIY--QYKTGSLIRAAVRIGALAAGNKSCDD 209 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG-KPTLPVILAFQRGTKR 248 V L Y +G+AFQ+ DD++D ++ K+ + N T P IL + Sbjct: 210 VLSFLDHYATTIGLAFQIQDDIIDISHAYDQKKKHSMQSQHNDVNNTYPKILGLSTARTK 269 Query: 249 EKNFW 253 ++ + Sbjct: 270 AQDLY 274 >gi|83953189|ref|ZP_00961911.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. NAS-14.1] gi|83842157|gb|EAP81325.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. NAS-14.1] Length = 301 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 131/264 (49%), Gaps = 21/264 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + ++Y + +GGK LR L + +A + A AIE +H +L+HDD+ +DD Sbjct: 43 VAEAMRYAV-TGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDD 101 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 ALRRG+ + W T+VL GD L + AF +V T +A E ++LV +R Sbjct: 102 DALRRGQPTVHVKWDEATAVLAGDALQTLAFELVAATGCGDA-ERVALVTGLARAAGVRG 160 Query: 148 LSLSKNLDVTEE--------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + +D+ E D + +++ KT L A ++AG + AL+SY Sbjct: 161 MVGGQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGPVMAGDDAA---ALRSYA 217 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS--- 255 NLG+AFQ+ DD+LD G+ +GK +G+D GK T +L R ++ + Sbjct: 218 RNLGLAFQIADDILDVEGDAATVGKAVGKDADAGKATFVSLLGLDPARARARDLVDAACD 277 Query: 256 TINDGKISVENLKKA--FIIMREN 277 ++ E L+ A F+I R++ Sbjct: 278 ALSPYGSDAETLRDAARFVIARKS 301 >gi|219870895|ref|YP_002475270.1| geranyltranstransferase [Haemophilus parasuis SH0165] gi|219691099|gb|ACL32322.1| geranyltranstransferase [Haemophilus parasuis SH0165] Length = 297 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 24/266 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D + Y + GGKR+RP L AT ML A A+E IH +L+HDD+ +D+ Sbjct: 36 DAMSYAVLLGGKRVRPFLIYATGKMLGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDT 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRGK + + T++L GD L S AF ++ S A + ++ + + + Sbjct: 96 LRRGKPTCHIAFDEATAILAGDALQSFAFELLAFDPSLTAEQKVAQMQWLAKSAGAKGMC 155 Query: 150 LSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVS-SLIAGVQ-NSVRQALKSYGMN 200 L ++LD+ E D L I ++KT L A++ + +L A Q + ++Q L Y Sbjct: 156 LGQSLDLQSEHKAIALDELERIHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAEA 215 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+AFQ+ DD+LD G +GK G D K T P +L + ++ ++ +++ + Sbjct: 216 IGLAFQVQDDILDVIGNSEVIGKTAGSDQALDKSTYPKLLGLEGAKQKAESLYQTALK-- 273 Query: 261 KISVENLK---------KAFIIMREN 277 ++E L FI+ REN Sbjct: 274 --ALETLPFDTTALAALAEFIVKREN 297 >gi|304322149|ref|YP_003855792.1| putative geranyltranstransferase (farnesyl-diphosphate synthase) [Parvularcula bermudensis HTCC2503] gi|303301051|gb|ADM10650.1| putative geranyltranstransferase (farnesyl-diphosphate synthase) [Parvularcula bermudensis HTCC2503] Length = 296 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 12/252 (4%) Query: 6 DLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 +L K +E N L++ R S + + + + GGKRLRP L L A + + Sbjct: 14 NLVTKSLE--NRLVINRTESPALGRLRAAMAHGALGGGKRLRPFLVLEAASIFGADDEAA 71 Query: 65 VLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + A AIE +H +L+HDD+ +DD+ RRG+ + + ++L GD LL+ AF ++ Sbjct: 72 LPAATAIEMVHCYSLIHDDLPAMDDADTRRGRPSVHKAYDEAIAILAGDGLLTDAFALLT 131 Query: 123 ETKSQEALEALSLV-ACTLAEGELRQLSLSKNLDV-----TEEDYLHVIKSKTAVLFSAA 176 E + A A LV LA G + + +D+ E + + + KT L AA Sbjct: 132 EEGTYTAPTACRLVRELALAAGSGGMVG-GQMMDLYPDGGDEAAIVGIQRRKTGALIEAA 190 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + +++ S AL+ Y +G AFQ+VDD+LD E+GK G D GK T Sbjct: 191 AVMGAIVGAAAPSDEAALRQYAAAVGEAFQVVDDILDETASSAELGKPAGVDGAAGKATF 250 Query: 237 PVILAFQRGTKR 248 +L R Sbjct: 251 VSLLGLAGARDR 262 >gi|241206841|ref|YP_002977937.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860731|gb|ACS58398.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 304 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 10/219 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + D + Y + +GGKRLRP L + +A +L + + + A+E +H +L+HDD+ Sbjct: 40 ETLRDAMHYAVLNGGKRLRPFLVVESAALLGGDAEAALRVGAALECVHCYSLVHDDLPAM 99 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-LEALSLVACTLAEGE 144 LRRGK + + T++L GD LL+ AF ++ ++ A SLV Sbjct: 100 DDDDLRRGKPTVHIKFDEATAILAGDSLLTYAFDIIAAPETTLADTSKASLVLALARAAG 159 Query: 145 LRQLSLSKNLDVTEE----DYLHVIK---SKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L ++ + LD+ E D +I+ KT L A E ++IA + R+ L+++ Sbjct: 160 LGGMAGGQALDLAAEKQAPDEAGIIRLQAMKTGALIRFACEAGAVIAASRPEDRRRLRAF 219 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G +G+AFQL DD+LD + MGK G+D GK TL Sbjct: 220 GEKIGLAFQLADDILDLTSDAATMGKATGKDAARGKGTL 258 >gi|148258788|ref|YP_001243373.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1] gi|146410961|gb|ABQ39467.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1] Length = 307 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 16/233 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y GGKRLRP L + +A + +L A+E IH +L+HDD+ +D+S LR Sbjct: 47 MRYSSLGGGKRLRPFLVVESAAVFGVPRKGALLAGAALECIHCYSLIHDDLPAMDNSDLR 106 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----------L 140 RG+ V+ + T++L GD LL+ AF ++ T+ + +A +A T + Sbjct: 107 RGRPTLHKVYDDATAILAGDALLTIAFDII--TRDEIHPDAGVRLALTRALARCAGVGGM 164 Query: 141 AEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A G++ L+ D D V + KT L +L+ + QAL YG Sbjct: 165 AGGQILDLAGEGRFGDSGPVDVARVQQMKTGALLRFGCIAGALLGQASPAEYQALDDYGR 224 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 LG AFQ+ DD+LD G+ +GK G D GK T L + +R ++ Sbjct: 225 ALGEAFQIADDLLDVEGDAATLGKPAGADAELGKTTFVTQLGIEGAKQRVRDL 277 >gi|152999876|ref|YP_001365557.1| polyprenyl synthetase [Shewanella baltica OS185] gi|160874501|ref|YP_001553817.1| polyprenyl synthetase [Shewanella baltica OS195] gi|217974160|ref|YP_002358911.1| polyprenyl synthetase [Shewanella baltica OS223] gi|151364494|gb|ABS07494.1| Polyprenyl synthetase [Shewanella baltica OS185] gi|160860023|gb|ABX48557.1| Polyprenyl synthetase [Shewanella baltica OS195] gi|217499295|gb|ACK47488.1| Polyprenyl synthetase [Shewanella baltica OS223] gi|315266739|gb|ADT93592.1| Polyprenyl synthetase [Shewanella baltica OS678] Length = 293 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 113/238 (47%), Gaps = 14/238 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y GGKR+RP L + M + A AIE IH +L+HDD+ +DD L Sbjct: 34 AMTYGALLGGKRIRPFLVYSVGRMFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDEL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT-----LA 141 RRG+ + + T++L GD L + AF +V E S++ + + ++A + Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMC 153 Query: 142 EGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ L S K++D+ LH +K T L S A+E++ + A A+ + Sbjct: 154 GGQAIDLASTDKHIDLKALTQLHNMK--TGALISCAVELALIAANAPKDQYAAMMDFARA 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD E+GK G D + K T P +L Q K + ++ Sbjct: 212 VGLAFQVQDDILDIVATTEELGKPQGSDTESNKSTFPQLLGLQGAQDTAKQLIQEALS 269 >gi|167770736|ref|ZP_02442789.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM 17241] gi|167667331|gb|EDS11461.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM 17241] Length = 293 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 11/216 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + D ++Y + GKRLR L L A + + LACAIE +H +L+HDD+ +D+ Sbjct: 33 VVDAMRYSLLDAGKRLRAALVLEFARLASAPREGATALACAIEMLHAYSLIHDDLPCMDN 92 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKSQEALEALSLVA--CT 139 RRGK + +G T++L GD LL+ AF ++ + + EA+ LS C Sbjct: 93 DDFRRGKPSCHKEFGESTALLAGDALLTLAFETAAGAPLLTDLQRVEAVCTLSKAGGVCG 152 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + G++ L+ N V E + KT L AA + L + A Y Sbjct: 153 MIGGQVIDLACEGNT-VDEATLDTLCTLKTGALLRAAARLGCLAGKADKKMYDAADRYAA 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +G+AFQ+ DD+LD G+ + +GK +G D N K T Sbjct: 212 AVGLAFQITDDILDVTGDAHTLGKPVGSDAENHKTT 247 >gi|53804815|ref|YP_113317.1| geranyltranstransferase [Methylococcus capsulatus str. Bath] gi|53758576|gb|AAU92867.1| geranyltranstransferase [Methylococcus capsulatus str. Bath] Length = 300 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 19/273 (6%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 + L D E+V + R+ + E + ++Y + GGKR+RP+LT AT + Sbjct: 5 RSLSDFMRSSQERVERALDARLPAADRMPERLHQAMRYSVLGGGKRMRPLLTYATGQTIG 64 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQ 116 D ACA+EFIH +L+HDD+ LRRGK + T++L GD L + Sbjct: 65 VAADLLDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKPTCHKAYDEATAILAGDGLQAL 124 Query: 117 AFCMVIETKSQ-----------EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 AF ++ + S E L S A + + S+ K LD+ + +H+ Sbjct: 125 AFHVLAQDPSIAVPAENRIAMIETLAKASGPAGMVGGQAIDLASVGKKLDLPGLENMHI- 183 Query: 166 KSKTAVLFSAALEVSSLI-AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 KT L A++ ++ L G+ L Y +G+AFQ+ DD+LD + +GK Sbjct: 184 -RKTGALIRASVRLACLARPGLPAEQFDRLDHYAKCIGLAFQIQDDILDEESDTQTLGKT 242 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G+D + KP P +L ++ + ++ + Sbjct: 243 RGKDRDHNKPNYPALLGLSGAKEKAEEMHEAAL 275 >gi|59711319|ref|YP_204095.1| geranyltranstransferase [Vibrio fischeri ES114] gi|59479420|gb|AAW85207.1| geranyltranstransferase [Vibrio fischeri ES114] Length = 301 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 79/287 (27%), Positives = 144/287 (50%), Gaps = 22/287 (7%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +++E++N L++I + + + +KY + GGKR RP L TA ML + + A Sbjct: 18 RNIEQLNQW-LEKIEIQQQPLTEAMKYSLLLGGKRARPYLVYITAQMLGIKAEFADSAAA 76 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------ 121 AIE +H+ +L+HDD+ +D+ LRRG + + T++L GD L + AF ++ Sbjct: 77 AIECVHSYSLIHDDLPAMDNDDLRRGHATCHIKYDEATAILAGDALQTLAFEILANGQLS 136 Query: 122 --IETKSQEALEALSLV--ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAA 176 ET + + LS A + G+ L K +D+ + +H +KT L A Sbjct: 137 DDAETSRIDMIRVLSKASGASGMCMGQSLDLQAEGKKVDLASLERIHA--NKTGALIKCA 194 Query: 177 LEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +++ +L AG + ++ L+ Y +G+AFQ+ DD+LD + +GK G D K T Sbjct: 195 VQLGALCAGDKGKAILPQLEIYADAIGLAFQVQDDILDIISDTETLGKPQGSDLELDKST 254 Query: 236 LPVILAFQRGTKREKNFWKSTI---NDGKISVENLK--KAFIIMREN 277 P +L + + + +++ I ND + + ++ ++I R+N Sbjct: 255 YPALLGLEGAKHKAEQLYQTAIEALNDIPYNTDAMQAFAQYVIERKN 301 >gi|314936356|ref|ZP_07843703.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80] gi|313654975|gb|EFS18720.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80] Length = 293 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 117/217 (53%), Gaps = 9/217 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + +GGKR+RP+L L T +L + A A+E IHT +L+HDD+ +D+ R Sbjct: 34 MQYSLDAGGKRIRPVLVLLTLEVLNENYKKGLQTALALEMIHTYSLIHDDLPAMDNDDFR 93 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RGK+ V+G ++L GD LL+++F ++ K+ +A + +++ + + Sbjct: 94 RGKLTNHKVYGEWKAILAGDALLTKSFELIANDKNLDAETKVKVISRLAHDSGNLGMVGG 153 Query: 152 KNLDVTEEDY---LHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + LD+ E+ LH + K+KT L ++ ++ IA V + L + +LG+ Sbjct: 154 QTLDMDSENTPIELHTLEQIHKAKTGALLKFSILSAADIANVNKEILNTLDCFSEHLGLM 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 214 FQIKDDLLDVYGDEKKLGKKVGSDVENHKSTYVSLLG 250 >gi|217977003|ref|YP_002361150.1| Polyprenyl synthetase [Methylocella silvestris BL2] gi|217502379|gb|ACK49788.1| Polyprenyl synthetase [Methylocella silvestris BL2] Length = 309 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 14/239 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L + TA + G+ A A+E IH +L+HDD+ +D+ Sbjct: 45 EAIRYSSLGGGKRLRPFLLIETARLFGVEGEGVTRAAAAVEMIHCYSLVHDDLPALDNDD 104 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE--TKSQEALEALSLVACTLAEGELRQ 147 LRRG+ + T++LVGD LL+ AF ++ + T + A+ A ++A A G Sbjct: 105 LRRGRATTHKAYDEATAILVGDGLLTYAFDVLADPATHADPAIRAELVLALARAAG-FGG 163 Query: 148 LSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + LD+ T E + + KT L ++ ++I R AL +YG Sbjct: 164 MIGGQVLDLEAEQSTAPHTAEAVIRLQSMKTGALLHFSVLAGAIIGAADAKARAALSAYG 223 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 LG AFQ+ DD+LD + +GK G+D K TL L + KR I Sbjct: 224 HALGAAFQVADDILDVEADEATLGKRAGKDAGRNKATLVAALGLEDARKRRDRLAAEAI 282 >gi|330899928|gb|EGH31347.1| polyprenyl synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 281 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 16/239 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 + K ++E + + ++Y + +GGKR+RP+L A L ++ ACA+E IH + Sbjct: 20 LFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYS 79 Query: 79 LLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALS 134 L+H +DD LRRG+ + ++L GD L S AF ++ S++A L Sbjct: 80 LVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQ 139 Query: 135 LV-ACTLAEGELRQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +V A A G + S+ LD +Y+H + KT L A++ + +L +G Sbjct: 140 MVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASG 197 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + R AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 198 HADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|228476147|ref|ZP_04060855.1| geranyltranstransferase [Staphylococcus hominis SK119] gi|228269970|gb|EEK11450.1| geranyltranstransferase [Staphylococcus hominis SK119] Length = 296 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 117/217 (53%), Gaps = 9/217 (4%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + +GGKR+RP+L L T +L + A A+E IHT +L+HDD+ +D+ R Sbjct: 37 MQYSLDAGGKRIRPVLVLLTLEVLNENYKKGLQTALALEMIHTYSLIHDDLPAMDNDDFR 96 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RGK+ V+G ++L GD LL+++F ++ K+ +A + +++ + + Sbjct: 97 RGKLTNHKVYGEWKAILAGDALLTKSFELIANDKNLDAETKVKVISRLAHDSGNLGMVGG 156 Query: 152 KNLDVTEEDY---LHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + LD+ E+ LH + K+KT L ++ ++ IA V + L + +LG+ Sbjct: 157 QTLDMDSENTPIELHTLEQIHKAKTGALLKFSILSAADIANVNKEILNTLDCFSEHLGLM 216 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 217 FQIKDDLLDVYGDEKKLGKKVGSDVENHKSTYVSLLG 253 >gi|332283715|ref|YP_004415626.1| geranyltranstransferase [Pusillimonas sp. T7-7] gi|330427668|gb|AEC19002.1| geranyltranstransferase [Pusillimonas sp. T7-7] Length = 304 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 31/238 (13%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLA---------TALMLEYRGDNHVLLACAIEFIHTAT 78 E + + ++Y + GGKR+R L A T + G +H A A+E IH + Sbjct: 35 ESLHEAMRYAVLGGGKRVRAALVYAAGEAALQSGTPASAQQIGLDHA--AAAVELIHAYS 92 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKS 126 L+HDD+ +DD LRRG+ + + T++L GD L AF ++++ Sbjct: 93 LIHDDLPCMDDDTLRRGRPTVHVRFSEATAMLAGDALQPLAFELLGLMPIAPALIVQATQ 152 Query: 127 QEALEA--LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 A A L +V + E ++LSK E + KT + A++ + ++A Sbjct: 153 LLARSAGSLGMVGGQAIDCESVGVALSK------EQLQQMHSMKTGAMLEASVLLGGIVA 206 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G ++VRQ L+ Y +G+AFQ+VDD+LD + +GK G+D KPT I+ Sbjct: 207 GAGSAVRQGLEDYATAIGLAFQVVDDILDVTADTVTLGKTAGKDAAGNKPTYVSIMGL 264 >gi|197301783|ref|ZP_03166853.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC 29176] gi|197299223|gb|EDY33753.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC 29176] Length = 296 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 14/219 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKRLRPML + + G AIE IHT +L+HDD+ +D+ Sbjct: 32 IMEAMEYSLMAGGKRLRPMLMWESYRLFGGEGAAIEPFMAAIEMIHTYSLVHDDLPAMDN 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEAL---EALSLVA---- 137 RRG+ +V+G +L GD LL+ AF C E +S+ AL +AL ++A Sbjct: 92 DEYRRGRKTTHIVYGEDMGILAGDALLNYAFETACRAFEEESEHALRIGKALKILADKAG 151 Query: 138 -CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + G++ + S V+ E + + KT+ L A++ +++AG + ++ Sbjct: 152 IYGMIGGQVVDVQESGKA-VSGEVLDFIYRLKTSALIEASMMAGAVLAGAEEGQVSRMEQ 210 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +G+AFQ+ DD+LD +GK + D +N K T Sbjct: 211 IAGKIGLAFQIQDDILDVTSTTELLGKPVHSDEKNEKTT 249 >gi|330951508|gb|EGH51768.1| polyprenyl synthetase [Pseudomonas syringae Cit 7] Length = 295 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 16/239 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 + K ++E + + ++Y + +GGKR+RP+L A L ++ ACA+E IH + Sbjct: 20 LFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYS 79 Query: 79 LLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALS 134 L+H +DD LRRG+ + ++L GD L S AF ++ S++A L Sbjct: 80 LVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQ 139 Query: 135 LV-ACTLAEGELRQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +V A A G + S+ LD +Y+H + KT L A++ + +L +G Sbjct: 140 MVTALATAAGPAGMVGGQAIDLGSVGLKLDQAGLEYMH--RHKTGALIEASVRLGALASG 197 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + R AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 198 HADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC 2396] gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC 2396] Length = 299 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 116/226 (51%), Gaps = 16/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y + +GGKR+RP+L LAT L + CA+E IH +L+HDD+ +DD + Sbjct: 39 EAMGYCVLNGGKRVRPLLLLATTEALGGDLQQALPACCAVELIHAYSLVHDDLPAMDDDS 98 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-- 147 LRRGK + + T++LVGD L + AF + E+ A L +V LA Q Sbjct: 99 LRRGKPTCHIAYDEATAILVGDGLQTLAFSALTESSGASAESVLQMVR-ELARASGHQGM 157 Query: 148 --------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYG 198 S L + E + +H+ KT L A++ + +L +G ++ + L+ + Sbjct: 158 VGGQAIDIYSEGHTLKLEELERMHL--EKTGALIEASIVLGALASGRADAECIEGLRRFA 215 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ+ DD++D + + +GK G+D KPT +L ++ Sbjct: 216 RAIGLAFQVRDDIIDVESDTSVLGKTAGKDAERNKPTYTSLLGLEQ 261 >gi|304409467|ref|ZP_07391087.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|307303825|ref|ZP_07583578.1| Polyprenyl synthetase [Shewanella baltica BA175] gi|304351985|gb|EFM16383.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|306912723|gb|EFN43146.1| Polyprenyl synthetase [Shewanella baltica BA175] Length = 293 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 113/238 (47%), Gaps = 14/238 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y GGKR+RP L + M + A AIE IH +L+HDD+ +DD L Sbjct: 34 AMTYGALLGGKRIRPFLVYSVGRMFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDEL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT-----LA 141 RRG+ + + T++L GD L + AF +V E S++ + + ++A + Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMC 153 Query: 142 EGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ L S K++D+ LH +K T L S A+E++ + A A+ + Sbjct: 154 GGQAIDLASTDKHIDLKALTQLHNMK--TGALISCAVELALIAANAPKDQYAAMMDFARA 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD E+GK G D + K T P +L Q K + ++ Sbjct: 212 VGLAFQVQDDILDIVATTEELGKPQGSDTESNKSTFPQLLGLQGAQDTAKQLIQEALS 269 >gi|117928903|ref|YP_873454.1| polyprenyl synthetase [Acidothermus cellulolyticus 11B] gi|117649366|gb|ABK53468.1| Polyprenyl synthetase [Acidothermus cellulolyticus 11B] Length = 339 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 109/209 (52%), Gaps = 1/209 (0%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGK +R L + +A + A A+E +H +LLHDDV+D RR + A Sbjct: 52 GGGKAVRSALAVLSAQAAGAPAAVGIPGAVAVELVHNFSLLHDDVMDGDEERRHRPTAWT 111 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-ALSLVACTLAEGELRQLSLSKNLDVTE 158 V+G ++L GD LL AF ++++ + +A + L L G+ L LDV+ Sbjct: 112 VFGRSAALLAGDALLGLAFDVLLDAEHGDAAQRCLGSATQELIAGQFDDLDFETRLDVSL 171 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 ++ + + +KTA L + A + + +AG ++ AL +G +LG+AFQLVDD+L G Sbjct: 172 DECVSMAGAKTAALMACASSIGARLAGADPALVNALDDFGRHLGLAFQLVDDLLGIWGAP 231 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 GK +G D R K +LPV+ A GT Sbjct: 232 EVTGKPVGADLRARKKSLPVVAAMTSGTP 260 >gi|83942134|ref|ZP_00954596.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36] gi|83847954|gb|EAP85829.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36] Length = 312 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 131/264 (49%), Gaps = 21/264 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + ++Y + +GGK LR L + +A + A AIE +H +L+HDD+ +DD Sbjct: 54 VAEAMRYAV-TGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDD 112 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 ALRRG+ + W T+VL GD L + AF +V T +A E ++LV +R Sbjct: 113 DALRRGQPTVHVKWDEATAVLAGDALQTLAFELVAATGCGDA-ERVALVTGLARAAGVRG 171 Query: 148 LSLSKNLDVTEE--------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + +D+ E D + +++ KT L A ++AG + AL+SY Sbjct: 172 MVGGQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGPVMAGDDAA---ALRSYA 228 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS--- 255 NLG+AFQ+ DD+LD G+ +GK +G+D GK T +L R ++ + Sbjct: 229 RNLGLAFQIADDILDVEGDAATVGKAVGKDADAGKATFVSLLGLDPARARARDLVDAACD 288 Query: 256 TINDGKISVENLKKA--FIIMREN 277 ++ E L+ A F+I R++ Sbjct: 289 ALSPYGSDAETLRDAARFVISRKS 312 >gi|77165502|ref|YP_344027.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707] gi|254434894|ref|ZP_05048402.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] gi|76883816|gb|ABA58497.1| farnesyl-diphosphate synthase [Nitrosococcus oceani ATCC 19707] gi|207091227|gb|EDZ68498.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] Length = 296 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 72/236 (30%), Positives = 118/236 (50%), Gaps = 19/236 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDV--VD 86 + ++Y + GGKRLRP+LT + + L G + +L A A+E IH +L+HDD+ +D Sbjct: 35 EAMRYAVLGGGKRLRPLLTYSAGIAL---GVSEAVLDAPASAVELIHAYSLVHDDLPSMD 91 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACT 139 + +LRRG +G T++L GD L + AF + E S LE L+ A + Sbjct: 92 NDSLRRGHPTCHKAFGETTALLAGDALQALAFRTLAEPTSAIPAKNQINMLELLAEAAGS 151 Query: 140 --LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 +A G+ L S+ L ++E + +H +K+ + S L Q+++ L Sbjct: 152 RGMAGGQAIDLDSVGVQLTLSEMETMHRLKTGALIRASVLLGAWCHPEITQDTLEN-LDR 210 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 + +G+AFQ+ DDVLD + +GK G D KPT P +L + R ++ Sbjct: 211 FAQCIGLAFQIQDDVLDVESDTATLGKPQGSDKAQDKPTYPSLLGLTQAKARAQSL 266 >gi|120599627|ref|YP_964201.1| polyprenyl synthetase [Shewanella sp. W3-18-1] gi|120559720|gb|ABM25647.1| farnesyl-diphosphate synthase [Shewanella sp. W3-18-1] Length = 293 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 14/223 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y GGKR+RP L + M + A AIE IH +L+HDD+ +DD AL Sbjct: 34 AMQYGALLGGKRIRPFLVYSVGQMFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT-----LA 141 RRG+ + + T++L GD L + AF +V E S++ + + +A + Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMC 153 Query: 142 EGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ L S K +D+ LH +K T L S A+E++ + Q + ++ Sbjct: 154 GGQAIDLASTDKQIDLKALTQLHNMK--TGALISCAVELALIAVNAPKDQYQTMMTFAHA 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+ DD+LD E+GK G D + K T P +L Q Sbjct: 212 VGLAFQVQDDILDIIATTEELGKPQGSDTESNKSTFPQLLGLQ 254 >gi|126173596|ref|YP_001049745.1| polyprenyl synthetase [Shewanella baltica OS155] gi|125996801|gb|ABN60876.1| farnesyl-diphosphate synthase [Shewanella baltica OS155] Length = 293 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 113/238 (47%), Gaps = 14/238 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y GGKR+RP L + M + A AIE IH +L+HDD+ +DD L Sbjct: 34 AMTYGALLGGKRIRPFLVYSVGRMFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDEL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT-----LA 141 RRG+ + + T++L GD L + AF +V E S++ + + ++A + Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMC 153 Query: 142 EGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ L S K++D+ LH +K T L S A+E++ + A A+ + Sbjct: 154 GGQAIDLASTDKHIDLKALTQLHNMK--TGALISCAVELALIAANAPKDQYAAMMDFARA 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD E+GK G D + K T P +L Q K + ++ Sbjct: 212 VGLAFQVQDDILDIVATTEELGKPQGSDTESNKSTFPQLLGLQGAQDTAKQLIQEALS 269 >gi|282162809|ref|YP_003355194.1| polyprenyl synthetase [Methanocella paludicola SANAE] gi|282155123|dbj|BAI60211.1| polyprenyl synthetase [Methanocella paludicola SANAE] Length = 342 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 15/263 (5%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK LR + L + + + A A+E +H +L+HDD+ D RR + +W Sbjct: 56 GKSLRSTMCLLACEAISGDSNKALPAAAAVELLHNFSLIHDDIEDGDVKRRHRDTLWKLW 115 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTLAEGELRQLSLSKNL 154 G ++ GD + A +++ + + + L EG+ + Sbjct: 116 GVPQAINTGDAMDIAANLSLLDLDGTVEPGMMVDIIRIFNQTVIELCEGQYLDMDFQGRS 175 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 DV+ +Y+ ++ KTA L A+ + +++A V ++G +GIAFQ+ DD+L Sbjct: 176 DVSVGEYITMVSGKTAALIEASTAIGAMVATGDRDVISRFGTFGRKIGIAFQIRDDILGI 235 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR---EKNFWKSTINDGKISVENLKKAF 271 G+ GK+ D RN K +LPV+ A ++ R + + K + DG I+ + F Sbjct: 236 WGDPESTGKSAKNDIRNKKKSLPVLYAMEKSRHRAELKTIYAKEQLTDGDIA-----RVF 290 Query: 272 IIMRENRALVDTEYRAYSYGQKA 294 I+ E AL T+ A Y +A Sbjct: 291 EILTEAGALEYTQSEAQRYKDEA 313 >gi|37527745|ref|NP_931090.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP synthase) [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787181|emb|CAE16258.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP synthase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 305 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 122/257 (47%), Gaps = 20/257 (7%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKRLRP L A M +N A A+E IH +L+HDD+ +D+ LRRG+ Sbjct: 49 GGKRLRPFLVYAVGEMFGLSANNLDAPAAAVECIHAFSLIHDDLPAMDNDDLRRGQPTCH 108 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQLSLSKNLDV 156 + +G ++L GD L + AF ++ + + + A L +VA + + + LD+ Sbjct: 109 IKFGEAHAILAGDALQALAFEILSKREMPDVTTADRLEMVAELATASGIAGMCGGQALDL 168 Query: 157 TEEDY---LHVI----KSKTAVLFSAALEVSSLIAGVQ-NSVRQALKSYGMNLGIAFQLV 208 E LH++ + KT L A+ + + AG + L Y +G+AFQ+ Sbjct: 169 AAEGRHIDLHMLEQIHRHKTGALIRCAVRMGAYGAGQSGHDALPELDQYAQAIGLAFQVQ 228 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST------INDGKI 262 DD+LD G+ +GK G D + GK T P +L ++ K+ ++ + D Sbjct: 229 DDILDVIGDTEMIGKRQGSDQQLGKSTYPALLGLEQAQKKAYELYQEALKALNKLEDKSY 288 Query: 263 SVENLK--KAFIIMREN 277 + L+ +FII R N Sbjct: 289 NTTMLRALASFIIERNN 305 >gi|225570636|ref|ZP_03779659.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM 15053] gi|225160554|gb|EEG73173.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM 15053] Length = 300 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 12/231 (5%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 +I + + Y + +GGKRLRPML T + R AIE IHT +L+HDD+ +D Sbjct: 35 IIMEAMSYSLLAGGKRLRPMLMKETYDLFNGRSKALKPFMAAIEMIHTYSLVHDDLPAMD 94 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 + RRG+ +V+G +L GD LL+ AF + E ++L + GE Sbjct: 95 NDEYRRGRRTTHVVYGEDMGILAGDALLNYAFETAFKAFVTEPEDSLLIGRALGVLGEKA 154 Query: 147 QLS----------LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + D+++E + + KTA L +A+ + +++ G +A++ Sbjct: 155 GIYGMIGGQVIDVRETGRDISKEVLDTIYELKTAALIESAMMIGAILGGASEEEVKAVEQ 214 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 N+GIAFQ+ DD+LD +GK + D +N K T +L + + Sbjct: 215 IAGNVGIAFQIQDDILDVVSSSEVLGKPVHSDEKNKKTTYVTLLGIEEAAR 265 >gi|254777239|ref|ZP_05218755.1| GAF domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 1804 Score = 99.0 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 10/206 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK LRP L++AT L L + + A +E H A L+HDD+ D+S RRGK + Sbjct: 1468 GGKALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIEDESWWRRGKPTLHID 1527 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTLAEGELRQLSL--S 151 G +V VGD +LS + +++ + L A++ + +G+ +L S Sbjct: 1528 HGVPVAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAVATMTRKTVDGQALELDWVHS 1587 Query: 152 KNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + + DYL +++ KT+ F L+ ++ AG L+S G +LG AFQ+ DD Sbjct: 1588 NTWRLDDADYLEMVELKTSWYSFITPLQAGAVAAGATPDRMAPLESLGRHLGAAFQITDD 1647 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTL 236 +L+ R + E GK IG D GK TL Sbjct: 1648 LLNLRADPQEYGKEIGGDLWEGKRTL 1673 >gi|254719767|ref|ZP_05181578.1| Polyprenyl synthetase [Brucella sp. 83/13] gi|265984787|ref|ZP_06097522.1| polyprenyl synthetase [Brucella sp. 83/13] gi|264663379|gb|EEZ33640.1| polyprenyl synthetase [Brucella sp. 83/13] Length = 304 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 12/215 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L L +A + G + +A A+E IH +L+HDD+ L Sbjct: 45 AMRHGVLNGGKRLRPFLVLESAALFGQHGQAVLRVAAALECIHCYSLVHDDLPAMDDDDL 104 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV-ACTLAEGELRQL 148 RRG+ + ++L GD LL+ AF ++ +++ +A + LV A T A G L + Sbjct: 105 RRGQPTVHRAFDEAAAILAGDSLLTYAFDIIASDETELDATTRIKLVCALTRASG-LGGM 163 Query: 149 SLSKNLDVTEE----DYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ E D +I KT L A E ++IAG R+ + +G + Sbjct: 164 AGGQALDLMAETRKPDEAGIITLQAMKTGALIRFACEAGAIIAGASREDRERMAEFGSAI 223 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + MGK G+D GK TL Sbjct: 224 GLAFQLADDLLDVTADAGTMGKATGKDAAAGKATL 258 >gi|295835333|ref|ZP_06822266.1| polyprenyl synthetase [Streptomyces sp. SPB74] gi|197696404|gb|EDY43337.1| polyprenyl synthetase [Streptomyces sp. SPB74] Length = 390 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 77/231 (33%), Positives = 111/231 (48%), Gaps = 28/231 (12%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V++L+ +G +R RP L A +L +++ L AIE HT +L+ DDV D S LRRG Sbjct: 81 VRHLVDAGRRRWRPGLVAAAIDLLGGDSEHYGPLCAAIELAHTGSLMVDDVQDGSPLRRG 140 Query: 94 KVAARLVWGNQTSVLVGD---FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 AA LV+G T++ G F +A + T + + A L LA LR Sbjct: 141 SPAAHLVFGTATALNAGTHAYFAFDRAVRL---TAAHDPALAGRLRDVFLA--ALRSAHA 195 Query: 151 SKNLDVTEE-----------DYLHVI-------KSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + LD+T D HV+ + KT + + E ++L+ R+ Sbjct: 196 GQGLDITGHRAEMAEAVATGDARHVLALVRLTHRLKTGAMAALGCETAALVTAADGPRRR 255 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMG--KNIGEDFRNGKPTLPVILA 241 AL ++G LG A+Q DDV D RG +E G K GED R+ K TLP+ A Sbjct: 256 ALAAFGEALGTAYQFTDDVADPRGVRHEDGATKQEGEDTRDNKVTLPLAHA 306 >gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis thaliana] Length = 306 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 122/231 (52%), Gaps = 18/231 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT++L+HDD+ +D+ Sbjct: 39 VQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDN 98 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAEG-EL 145 + LRRGK V+G +VL GD LL+ AF M + + A E + LA Sbjct: 99 ADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVELARAIGT 158 Query: 146 RQLSLSKNLDVTEE------------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L + +D++ E +++H+ KTA L AA + +++ G + Sbjct: 159 KGLVAGQVVDLSSERLNPHDVGLERLEFIHL--HKTAALLEAAAVIGAIMGGGTEEEIEK 216 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P ++ +R Sbjct: 217 LRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLER 267 >gi|157376460|ref|YP_001475060.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3] gi|157318834|gb|ABV37932.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3] Length = 293 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 E++ +I + +D+++ +K+ GGKR+RP L A ML + A AIE Sbjct: 15 EQIKSIIDSQATTDLKL-QAAMKHGALIGGKRIRPFLVYAIGDMLNVAPEKLDACAAAIE 73 Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-----TK 125 +H +L+HDD+ +DD ALRRG+ + + T++L GD L + AF + E T Sbjct: 74 CVHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQALAFESICEPINGITP 133 Query: 126 SQEALEALSLVACT----LAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 SQ +L + + G+ L+ + K +D+ LH + KT L A+E+ Sbjct: 134 SQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTKLH--RLKTGALIRCAVELP 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + A V + L + +G+AFQ+ DDVLD E+GK G D + K T P +L Sbjct: 192 MIAAAVTVEEQNLLMDFADAIGLAFQVQDDVLDIIASTEELGKPQGSDCDSNKSTYPRLL 251 Query: 241 AFQRGTKREKNFWKSTINDG 260 G + + +S I+D Sbjct: 252 ----GLEGAQATAQSLIDDA 267 >gi|330978746|gb|EGH77971.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 295 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 16/239 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 + K ++E + ++Y + +GGKR+RP+L A L ++ ACA+E IH + Sbjct: 20 LFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYS 79 Query: 79 LLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALS 134 L+H +DD LRRG+ + ++L GD L S AF ++ S++A L Sbjct: 80 LVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHPTSRDAETRLQ 139 Query: 135 LV-ACTLAEGELRQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +V A A G + S+ LD +Y+H + KT L A++ + +L +G Sbjct: 140 MVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASG 197 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + R AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 198 HADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|190893863|ref|YP_001980405.1| geranyltranstransferase [Rhizobium etli CIAT 652] gi|190699142|gb|ACE93227.1| geranyltranstransferase protein [Rhizobium etli CIAT 652] Length = 327 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 77/237 (32%), Positives = 121/237 (51%), Gaps = 16/237 (6%) Query: 15 VNFLILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++ L+L SD P+ ++ Y + +GGKRLRP L + +A +L + + A Sbjct: 46 LDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPFLVVESAALLGGDAQAALRIGAA 105 Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKS 126 +E +H +L+HDD+ +RRGK + + T++L GD LL+ AF +V ET Sbjct: 106 LECVHCYSLVHDDLPAMDDDDIRRGKPTVHVKFDEATAILAGDSLLTYAFDIVAAPETAL 165 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEE----DYLHVIK---SKTAVLFSAALEV 179 + +A SLV L ++ + LD+ E D +I+ KT L A E Sbjct: 166 PDTSKA-SLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAMKTGALIRFACEA 224 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +++AG RQ L+++G +G+AFQL DD+LD + MGK G+D GK TL Sbjct: 225 GAILAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDAATMGKATGKDAARGKGTL 281 >gi|118462300|ref|YP_883928.1| polyprenyl synthetase [Mycobacterium avium 104] gi|118163587|gb|ABK64484.1| polyprenyl synthetase [Mycobacterium avium 104] Length = 395 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 10/206 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK LRP L++AT L L + + A +E H A L+HDD+ D+S RRGK + Sbjct: 59 GGKALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIEDESWWRRGKPTLHID 118 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQ----EALEALSLVAC---TLAEGELRQLSL--S 151 G +V VGD +LS + +++ + AL L VA +G+ +L S Sbjct: 119 HGVPVAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAVATMTRKTVDGQALELDWVHS 178 Query: 152 KNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + + DYL +++ KT+ F L+ ++ AG L+S G +LG AFQ+ DD Sbjct: 179 NTWRLDDADYLEMVELKTSWYSFITPLQAGAVAAGSTPDRMAPLESLGRHLGAAFQITDD 238 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTL 236 +L+ R + E GK IG D GK TL Sbjct: 239 LLNLRADPQEYGKEIGGDLWEGKRTL 264 >gi|154244163|ref|YP_001415121.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2] gi|15553715|gb|AAL01997.1|AF408846_1 farnesyl diphosphate synthase [Xanthobacter autotrophicus Py2] gi|154158248|gb|ABS65464.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2] Length = 308 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 106/224 (47%), Gaps = 23/224 (10%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ GGKRLRP L + +A + D V A AIE IH +L+HDD+ L Sbjct: 42 AMRHGALGGGKRLRPFLVIESAALFGIPADQAVTAATAIECIHCYSLVHDDLPAMDDDDL 101 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE----------ALEALSLVACTL 140 RRG+ + T++L GD LL+ AF ++ + AL S + + Sbjct: 102 RRGRPTVHRAFDEATAILAGDGLLTLAFDLLAGEDAHPDPAVRIALVRALARASGIGGMV 161 Query: 141 --------AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 AEG + S L + E+ + KT L + ++E +L+ G R Sbjct: 162 GGQMLDLAAEG---RFSGGTPLALAEDAIRDLQAMKTGALLAVSVEAGALLGGATADERA 218 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 AL +YG LG AFQ+ DD+LD G E+GK +G+D GK TL Sbjct: 219 ALLAYGRALGAAFQIADDILDVEGTAEEVGKKVGKDAAAGKATL 262 >gi|317056625|ref|YP_004105092.1| polyprenyl synthetase [Ruminococcus albus 7] gi|315448894|gb|ADU22458.1| Polyprenyl synthetase [Ruminococcus albus 7] Length = 297 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 15/261 (5%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDV--V 85 ++ + ++Y + +GGKRLRP+L L M D + +AC++E IHT +L+HDD+ + Sbjct: 33 VVLEAMEYSLTAGGKRLRPILVLEFYRMCGGEDIDKMIKVACSVELIHTYSLIHDDLPCM 92 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQE-ALEALSLVACT 139 D+ RRGK + + ++L GD L + AF C + T S E A+ +S+++ Sbjct: 93 DNDDFRRGKPSCHKAFSEDIALLAGDALNTLAFEVITDCAMEGTISAETAVMLVSVLSKA 152 Query: 140 LAEGEL---RQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALK 195 + + + + L +V + + L+ ++S KT L AA + +++G + A Sbjct: 153 IGTDGMIGGQVIDLETENEVIDIETLNRLQSCKTGALIEAACVMGVVLSGKMEYI-PAAA 211 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y +G AFQ+VDD+LD G E+GK IG D K T +L QR ++ + Sbjct: 212 DYAQAMGRAFQIVDDILDVTGTFEELGKPIGSDSEQHKNTYVSLLGLQRSRQKAAQLTVT 271 Query: 256 TINDGKISVENLKKAFIIMRE 276 + K + EN + F + RE Sbjct: 272 ALGALK-NFENNEFVFELTRE 291 >gi|261867966|ref|YP_003255888.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413298|gb|ACX82669.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Aggregatibacter actinomycetemcomitans D11S-1] Length = 296 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 14/263 (5%) Query: 13 EKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +++N + K+ I S + + +KY + GGKR+RP L AT ML + A Sbjct: 13 QRINHFLAKQFAHIDSAPAPLAEAMKYGLLLGGKRIRPFLVYATGKMLGADMAHLDYAAA 72 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IH +L+HDD+ +DD LRRG + + T++L GD L + AF ++ + Sbjct: 73 AIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTLAFEILTDIPHL 132 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVS 180 A + L L+ A ++ + L ++LD+ E + + +KT L +AAL++ Sbjct: 133 SAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKTGALLTAALKMG 192 Query: 181 SLIAG--VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + ++ Q L+ Y +G+AFQ+ DD+LD G+ +GK G D K T P Sbjct: 193 FICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSATLGKTTGSDLTADKSTYPK 252 Query: 239 ILAFQRGTKREKNFWKSTINDGK 261 +L + ++ ++ + + K Sbjct: 253 LLGLEGAKQKALELYERALTELK 275 >gi|186472776|ref|YP_001860118.1| polyprenyl synthetase [Burkholderia phymatum STM815] gi|184195108|gb|ACC73072.1| Polyprenyl synthetase [Burkholderia phymatum STM815] Length = 291 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 17/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + GGKR+RP+L A + + + + A+E IH +L+HDD+ Sbjct: 28 EAMRYAVLGGGKRVRPLLCHAAGELAGAKAECLDAASAALEMIHVYSLVHDDMPCMDDDD 87 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIETKSQEALE---ALSLVACTLAE 142 LRRGK + + T++LVGD L SQAF V Q AL AL+ + +A Sbjct: 88 LRRGKPTVHVKYDEATALLVGDALQSQAFVALTSDVFSPAQQAALVRELALASGSIGMAG 147 Query: 143 GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-----VRQALKS 196 G+ L S+ L + + +H + KT L AA+ + +L V N QAL + Sbjct: 148 GQAIDLASVGHTLTRPQLETMH--RLKTGALLRAAVRMGALTGQVDNGGPDAKALQALDA 205 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 Y +G+AFQ+VDD+LD + +GK G+D ++GKPT I+ Sbjct: 206 YSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGL 251 >gi|260583700|ref|ZP_05851448.1| geranyltranstransferase [Granulicatella elegans ATCC 700633] gi|260158326|gb|EEW93394.1| geranyltranstransferase [Granulicatella elegans ATCC 700633] Length = 294 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 14/250 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y SGGKR+RP+L L + + E + +A ++E IHT +L+HDD+ +D+ RRG Sbjct: 36 YACSSGGKRIRPLLVLLISHLEEVELQKVLPVAASLEMIHTYSLIHDDLPGMDNDDYRRG 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLV--ACTLAEGELR 146 K+ + T++L GD LL+ F C + + K A++ L A + G++R Sbjct: 96 KLTVHKQFDEATAILAGDALLTLTFEELAQCQLSDAKKVRAIQVLGSASGASGMITGQMR 155 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 ++ S++ ++T E + KT L AA+ + L+ +AL +G++ G+AFQ Sbjct: 156 DIA-SEHQEITLEQLKQIHADKTGQLLLAAIRLGLLVLEDATPYEEALLKFGVHFGLAFQ 214 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 + +D+ D + + GK G+D K T P IL G K + IN K ++ + Sbjct: 215 IQNDLQDVCWDSEKTGKVTGQDAALEKNTYPSIL----GIDGAKLALEQEINQAKQAILS 270 Query: 267 LKKAFIIMRE 276 + + R+ Sbjct: 271 IPNETTVQRQ 280 >gi|298292712|ref|YP_003694651.1| polyprenyl synthetase [Starkeya novella DSM 506] gi|296929223|gb|ADH90032.1| Polyprenyl synthetase [Starkeya novella DSM 506] Length = 305 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 17/226 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + +++ +GGKRLRP L + +A + + A A+E IH +L+HDD+ + Sbjct: 34 ERLASAMRHGALAGGKRLRPFLVIESAALFGVPAAAAMPAAAALECIHCYSLVHDDLPAM 93 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVA------- 137 D+ LRRG+ + T++L GD LL+ AF + E +A ++LVA Sbjct: 94 DNDDLRRGQPTVHRAYDEATAILAGDGLLTLAFEILAREEAGPDAEVRIALVASLAHAAG 153 Query: 138 -CTLAEGELRQLSL------SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + G++ L+ + LD+ E+ + + KT L A E +L+ Sbjct: 154 VAGMIGGQMLDLAAEGRFASGRPLDLPAEEIIRLQAMKTGALLRQACEAGALVGRATPEE 213 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 R +L Y +G AFQ+ DD+LD GE + +GK +G+D GK TL Sbjct: 214 RASLDRYARAVGRAFQIADDLLDVEGEADTVGKAVGKDAAAGKATL 259 >gi|284050730|ref|ZP_06380940.1| trans-hexaprenyltranstransferase [Arthrospira platensis str. Paraca] Length = 211 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/174 (36%), Positives = 100/174 (57%), Gaps = 3/174 (1%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L GKR+RP +L ++ A M ++ H LA E IHTA+L+HDDVVD+S LR Sbjct: 38 EHLFSVQGKRVRPAIVLLISRATMPDHEIIPKHRRLAEITEMIHTASLVHDDVVDESELR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG ++ N+ +VL GDFL +Q+ + + E ++ LS V LAEGE++Q Sbjct: 98 RGVPTVHSLFNNRVAVLAGDFLFAQSSWYLANLDNLEVVKLLSQVIMDLAEGEIQQGLNR 157 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + ++ E YL KTA L + + + + L++GV + + L YG N+G+AF Sbjct: 158 FDTSLSIEAYLEKSYYKTASLIANSSKAAGLLSGVSAELAEDLYKYGRNIGLAF 211 >gi|295700827|ref|YP_003608720.1| polyprenyl synthetase [Burkholderia sp. CCGE1002] gi|295440040|gb|ADG19209.1| Polyprenyl synthetase [Burkholderia sp. CCGE1002] Length = 293 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 118/224 (52%), Gaps = 17/224 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+L A + R + A A+E IH +L+HDD+ +DD Sbjct: 34 EAMRYAVLGGGKRVRPLLCHAAGELTGARAERLDAAAAALEMIHVYSLVHDDMPCMDDDE 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIETKSQEALE---ALSLVACTLAE 142 LRRGK + + T++LVGD L SQAF + V+ Q AL AL+ + + Sbjct: 94 LRRGKPTVHVKYDEATALLVGDALQSQAFVVLTSDVLGQPQQAALVRELALASGSVGMCG 153 Query: 143 GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS---YG 198 G+ L S+ L + +H + KT L AA+ + +L ++ QAL S Y Sbjct: 154 GQAIDLASVGHTLTRPRLETMH--RMKTGALLRAAVRMGALAGETPDA--QALASLDAYA 209 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D ++GKPT I+ Sbjct: 210 AAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGL 253 >gi|153802298|ref|ZP_01956884.1| geranyltranstransferase [Vibrio cholerae MZO-3] gi|124122180|gb|EAY40923.1| geranyltranstransferase [Vibrio cholerae MZO-3] Length = 294 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 12/241 (4%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L RI + + ++Y + GGKR RP L T ML + A A+E IH +L Sbjct: 20 LNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSL 79 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSL 135 +HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E +++ Sbjct: 80 IHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAM 139 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN 188 + ++ + L + LD+ E+ L + ++KT L A+ + +L AG + Sbjct: 140 IQALAEASGVQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKG 199 Query: 189 -SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ L Y +G+AFQ+ DD+LD + +GK G D K T P +L + + Sbjct: 200 RAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQ 259 Query: 248 R 248 + Sbjct: 260 K 260 >gi|86747642|ref|YP_484138.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2] gi|86570670|gb|ABD05227.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2] Length = 308 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 27/269 (10%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPD----------VVKYLIFSGGKRLRPMLTLATAL 55 D T +D E +L R+ SD +++PD ++Y GGKRLRP L + +A Sbjct: 15 DATAEDTEA----LLGRLLSD-DLLPDEIARPRRLMEAIRYSTLGGGKRLRPFLAVESAA 69 Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFL 113 + +L+ A+E IH +L+HDD+ +D+S LRRG+ + + T++L GD L Sbjct: 70 VFGVDRAGALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAGDAL 129 Query: 114 LSQAFCMVIETK-SQEALEALSLVACTLAEGELRQLSLSKNLDVTEE---------DYLH 163 L+ AF ++ + Q+A L L L + + LD+ E D Sbjct: 130 LTLAFDIITRDEVHQDAKVRLDLNRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVAR 189 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 + + KT L +++ +AL YG LG AFQ+ DD+LD G+ +GK Sbjct: 190 LQQMKTGALLRYGCVAGAILGQASPEHYKALDDYGRALGEAFQIADDLLDVEGDAAALGK 249 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNF 252 G D GK T L +R ++ Sbjct: 250 PAGADAALGKTTFVTQLGVDGAKQRVRDL 278 >gi|58696945|ref|ZP_00372440.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila simulans] gi|58699606|ref|ZP_00374302.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila ananassae] gi|225630859|ref|YP_002727650.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi] gi|58533876|gb|EAL58179.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila ananassae] gi|58536823|gb|EAL60043.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila simulans] gi|225592840|gb|ACN95859.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi] Length = 263 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 121/207 (58%), Gaps = 11/207 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y++ + K +R L +A++ + + +A AIEF+H +L+HDD+ +D+S R Sbjct: 30 MRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEFVHAYSLIHDDLPCMDNSDTR 89 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA-EGELRQLSL 150 R +++ + T+VL GD LL+ AF V+ + +++ E + +++ + G + +L Sbjct: 90 RSQLSCHKKFDEATAVLAGDALLTLAF-EVLSSLNEKRCEIIKVLSQAIGIRGMVGGQAL 148 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + D + +H++K TA LF+A+ E+ ++I G + R+AL ++G+NLG+ FQ DD Sbjct: 149 DIDTDFNKIKEIHLMK--TAKLFAASCEIGAIIGGATDEQRRALYNFGINLGLIFQAKDD 206 Query: 211 VLDYRGE-----VNEMGKNIGEDFRNG 232 + DY + ++ +GK+ ED+ +G Sbjct: 207 IEDYEQDKTNNLMSVLGKSEVEDYIDG 233 >gi|241668001|ref|ZP_04755579.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876535|ref|ZP_05249245.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842556|gb|EET20970.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 293 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 79/268 (29%), Positives = 136/268 (50%), Gaps = 20/268 (7%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 I S + + + +KY FSGGKR+R A N +A AIE IHT +L Sbjct: 18 FSEIQSPSKKLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCHKIAFAIECIHTYSL 77 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSL 135 +HDD+ +D+ LRRGK + + T++L GD L S F ++ ++ L+ +++ Sbjct: 78 IHDDLPAMDNDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINTLDINDIYKLKKVNI 137 Query: 136 V--ACTLAEGEL--RQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 V C EG + +QL + ++NL + + + LH+ +KTA +F A++ + +++ N Sbjct: 138 VFAKCCGLEGMVGGQQLDIDGENQNLKLQDLEILHI--NKTAKMFRASIVLPYIVSKYNN 195 Query: 189 SVRQALKSYGMNL-GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +A+ + +L G+ FQ+ DD+LD E+GK G+D K T ++ K Sbjct: 196 DEFEAILTKVSDLIGLCFQIKDDILDVTRSTQELGKTSGKDINANKSTYVSLMGLDGANK 255 Query: 248 R---EKNFWK---STINDGKISVENLKK 269 +KN + S +N +S +NL+K Sbjct: 256 YLFDKKNEIRKLLSELNKKNLSTQNLEK 283 >gi|269127237|ref|YP_003300607.1| polyprenyl synthetase [Thermomonospora curvata DSM 43183] gi|268312195|gb|ACY98569.1| Polyprenyl synthetase [Thermomonospora curvata DSM 43183] Length = 353 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 87/302 (28%), Positives = 141/302 (46%), Gaps = 29/302 (9%) Query: 41 GGKRLRPMLTL-----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGKRLRP A +E A ++E + + L+HDDV+D S RRG+ Sbjct: 45 GGKRLRPAFCYWGWRAAGGEDIEAA-TGIAAAAASLELLQASALIHDDVMDASDTRRGQP 103 Query: 96 AAR----------------LVWGNQTSVLVGDFLLSQAFCMV----IETKS-QEALEALS 134 +A +G +++L+GD L+ + M ++T++ + Sbjct: 104 SAHRRFEAMHREHGWRGGAAAFGEGSAILLGDLCLAWSAEMFDTSGLDTEALRRGRPVFD 163 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQA 193 L+ + G+ + S T E L V++ K+A L + + +AG V +A Sbjct: 164 LMRTEVICGQYLDMLESARGAGTVERALTVVEFKSAKYTIERPLHMGAELAGGTPEVVEA 223 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L++YG LGIAFQL DDVL G+ E GK G+D R GK T+ V +R T E F Sbjct: 224 LRAYGRPLGIAFQLRDDVLGVFGDPAETGKPAGDDLREGKRTVLVAFTLERATPAEAEFI 283 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLME 312 +S + D ++ E + + I+ + AL E Y ++A ++LR P S +++L E Sbjct: 284 ESRLGDPELDAEGIAQLRSIIDGSGALAACEELIDRYTEQAYEALRSAPIASDARQALAE 343 Query: 313 VV 314 + Sbjct: 344 LA 345 >gi|261366961|ref|ZP_05979844.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176] gi|282571079|gb|EFB76614.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176] Length = 295 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 113/217 (52%), Gaps = 12/217 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I +Y + GGKR+R +L L+ + + + ACA+E +H +L+HDD+ +D+ Sbjct: 35 IGQAARYSLLGGGKRIRAVLALSACELAGKPAELALDYACALEMLHCYSLIHDDMPCMDN 94 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE-GELR 146 RRG+ + +G T++L D L++ AF ++ +++ + E+ A LA+ G R Sbjct: 95 DDFRRGRPSCHKQYGEATALLAADALVTAAFEVI--AQAELSPESRCRAAAVLAKAGGAR 152 Query: 147 QLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + LD TE+ L + KT L AA+E+ + A + RQAL+ Y Sbjct: 153 GMLYGQELDKKYEAQSATEQQLLELHAHKTGALILAAVELGCIAADAAPATRQALQRYAA 212 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 LG+ FQ+VDD+LD E+GK +G D N K T Sbjct: 213 ELGLVFQIVDDILDVTSTTEELGKPVGSDEENDKTTF 249 >gi|319404799|emb|CBI78400.1| geranyltranstransferase [Bartonella rochalimae ATCC BAA-1498] Length = 300 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 12/220 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ + +++ + +GGKRLRP L + +A + + ++ + + A+E IH +L+HDD+ + Sbjct: 36 EILINAMRHGVLNGGKRLRPFLVIQSAALFDISPEDSLDIGVALECIHCYSLIHDDLPAL 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-------CMVIETKSQEALEALSLVAC 138 D+ LRRG+ + + T++L G+ LL+ AF C E + AL+ A Sbjct: 96 DNDTLRRGQPTVHIAFDEGTAILAGNALLTFAFEIIAHKACSFSSKTRIELITALTQAAG 155 Query: 139 --TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + G++ L K E + + + KTA L A + +++ ++ L S Sbjct: 156 LGGMIGGQMLDLEAEKKPQ-NESATITLQQMKTAALIRFACQAGAIMGRASKTLTHKLAS 214 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +G ++G+AFQL DD+LD +GK G+D K TL Sbjct: 215 FGTHIGLAFQLTDDLLDLTSHTKILGKTAGKDQIANKATL 254 >gi|306839463|ref|ZP_07472271.1| geranyltranstransferase [Brucella sp. NF 2653] gi|306405408|gb|EFM61679.1| geranyltranstransferase [Brucella sp. NF 2653] Length = 288 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 12/215 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L L +A + G + +A A+E IH +L+HDD+ L Sbjct: 29 AMRHGVLNGGKRLRPFLVLESAALFGQHGQAVLRVAAALECIHCYSLVHDDLPAMDDDDL 88 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV-ACTLAEGELRQL 148 RRG+ + ++L GD LL+ AF ++ +++ +A + LV A T A G L + Sbjct: 89 RRGQPTVHRAFDEAAAILAGDSLLTYAFDIIASDETELDATTRIKLVCALTRASG-LGGM 147 Query: 149 SLSKNLDVTEE----DYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ E D +I KT L A E ++IAG R+ + +G + Sbjct: 148 AGGQALDLMAETRKPDEAGIITLQAMKTGALIRFACEAGAIIAGASREDRERMAEFGSAI 207 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + MGK G+D GK TL Sbjct: 208 GLAFQLADDLLDVTADAGTMGKATGKDAAAGKATL 242 >gi|116872794|ref|YP_849575.1| geranyltranstransferase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741672|emb|CAK20796.1| geranyltranstransferase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 293 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 130/257 (50%), Gaps = 16/257 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRG 93 Y + +GGKR+RPML AT L + A A+E IHT +L+HDD+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALNKDPMIGLKTATALEMIHTYSLIHDDLPAMDDDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----CTLAEGEL--RQ 147 K V+G+ T++L GD LL+ AF +V E ++ ++L+ + AEG + +Q Sbjct: 98 KKTNHKVFGDATAILAGDALLTLAFSIVAEDENLSFETRIALINQISYSSGAEGMVGGQQ 157 Query: 148 LSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + ++N VT E+ + KT L A+ ++ IA + + L+ + N+G+ FQ Sbjct: 158 ADIEAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEANSEQTKRLRIFAENIGVGFQ 217 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN----FWKSTINDGKI 262 + DD+LD G+ +MGK G D K T P +L G KR N KS ++ + Sbjct: 218 ISDDILDVIGDETKMGKKTGVDVFMNKSTYPGLLTLD-GAKRALNEHVSIAKSALSGHDL 276 Query: 263 SVENLKKA--FIIMREN 277 E L K I +REN Sbjct: 277 DDEILLKLADLIALREN 293 >gi|227510476|ref|ZP_03940525.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190128|gb|EEI70195.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 307 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 12/223 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA-CAIEFIHTATLLHDD 83 +D + + + + Y + +GGKRLRP+LT+AT + + +L A CA+E +H+ +L+HDD Sbjct: 31 TDQQKLFESMSYSVNAGGKRLRPLLTIATLITFNQTITDSILKATCALELLHSYSLIHDD 90 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ LRRGK ++G + L GD L + AF V++ +A A Sbjct: 91 LPAMDNDGLRRGKPTNHTIYGAGMATLAGDGLQALAFQWVVDNDLTADTRCQLALALAKA 150 Query: 142 EGELRQLSLSKNLDVTEEDY---LHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G R ++ + D+ E LH + ++KT L S A+ ++A V ++ L Sbjct: 151 AGP-RGMASGQADDIEFEGTRLKLHELQKLDRNKTGALISYAVNAGLIMAQVPKDQKKDL 209 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF-RNGKPTL 236 ++ N G AFQ+ DD+LD G+ +GK + +D +N P L Sbjct: 210 LAFANNFGAAFQIYDDILDIVGDEKAIGKPVHQDADKNTYPNL 252 >gi|148269899|ref|YP_001244359.1| polyprenyl synthetase [Thermotoga petrophila RKU-1] gi|281412220|ref|YP_003346299.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10] gi|61657360|emb|CAI44277.1| geranyltranstransferase [Thermotoga naphthophila RKU-10] gi|147735443|gb|ABQ46783.1| farnesyl-diphosphate synthase [Thermotoga petrophila RKU-1] gi|281373323|gb|ADA66885.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10] Length = 272 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 10/245 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKR+RP+L L L + + +A A+E HTA+L+HDD+ +D++ RRGK + Sbjct: 33 GGKRIRPLLVLTLGEDLGVEEEKLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKPSCH 92 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS-KNLDVT 157 +G ++L GD L AF + + + + E S A L GE + + ++++ Sbjct: 93 RTYGEDIALLAGDGLFFLAFSQISKIGNSKIFEEFSETAYKLLLGEAMDVEFERRKMEIS 152 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 +E + KT LF+ ++ + +K G G+AFQ+ DD+ D G Sbjct: 153 QEMVERMYAFKTGALFAFCFSAPFIL---KEKDHTKMKLLGEKFGVAFQIYDDLKDILGS 209 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 ++GK++G+D K TL + Q+ + +++ + I E L + +++E Sbjct: 210 FEKVGKDLGKD--TEKVTLVKKVGIQKAREMADKYYEEVLKG--IESEGLFRTLFLLKEL 265 Query: 278 RALVD 282 + +V+ Sbjct: 266 KQMVE 270 >gi|306844758|ref|ZP_07477343.1| geranyltranstransferase [Brucella sp. BO1] gi|306274930|gb|EFM56700.1| geranyltranstransferase [Brucella sp. BO1] Length = 288 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 12/215 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L L +A + G + +A A+E IH +L+HDD+ L Sbjct: 29 AMRHGVLNGGKRLRPFLVLESAALFGQHGQAVLRVAAALECIHCYSLVHDDLPAMDDDDL 88 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV-ACTLAEGELRQL 148 RRG+ + ++L GD LL+ AF ++ +++ +A + LV A T A G L + Sbjct: 89 RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIASDETELDATTRIKLVCALTRASG-LGGM 147 Query: 149 SLSKNLDVTEE----DYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ E D +I KT L A E ++IAG R+ + +G + Sbjct: 148 AGGQALDLMAETRKPDEAGIITLQAMKTGALIRFACEAGAIIAGASREDRERMAEFGSAI 207 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + MGK G+D GK TL Sbjct: 208 GLAFQLADDLLDVTADAGTMGKATGKDAAAGKATL 242 >gi|15231869|ref|NP_188069.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana] Length = 284 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 122/231 (52%), Gaps = 18/231 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT++L+HDD+ +D+ Sbjct: 17 VQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDN 76 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAEG-EL 145 + LRRGK V+G +VL GD LL+ AF M + + A E + LA Sbjct: 77 ADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVELARAIGT 136 Query: 146 RQLSLSKNLDVTEE------------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + L + +D++ E +++H+ KTA L AA + +++ G + Sbjct: 137 KGLVAGQVVDLSSERLNPHDVGLERLEFIHL--HKTAALLEAAAVIGAIMGGGTEEEIEK 194 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P ++ +R Sbjct: 195 LRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLER 245 >gi|78048472|ref|YP_364647.1| geranyltranstransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036902|emb|CAJ24595.1| Geranyltranstransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 291 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 10/232 (4%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L R + + +++ + GGKR+RP+L A+ + D A A+E IH +L Sbjct: 21 LPRATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSL 80 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD ALRRG+ + + T++L GD L ++AF + + T S A +S + Sbjct: 81 VHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFEL-LATASASAELRVSWIQ 139 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSV 190 + + LD+ L ++ KT L AA+ + +L G + Sbjct: 140 SLATAAGAAGMCGGQALDIDATGQLQSLQDLQRMHALKTGALIRAAVRMGALTGGAAAAD 199 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +Q L + LG+AFQ+ DD+LD ++GK G+D K T P +L Sbjct: 200 QQRLDEFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQAKSTYPALLGM 251 >gi|66043872|ref|YP_233713.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a] gi|63254579|gb|AAY35675.1| Polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a] gi|330971592|gb|EGH71658.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 295 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 16/239 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 + K ++E + ++Y + +GGKR+RP+L A L ++ ACA+E IH + Sbjct: 20 LFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYS 79 Query: 79 LLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALS 134 L+H +DD LRRG+ + ++L GD L S AF ++ S++A L Sbjct: 80 LVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQ 139 Query: 135 LV-ACTLAEGELRQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +V A A G + S+ LD +Y+H + KT L A++ + +L +G Sbjct: 140 MVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASG 197 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + R AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 198 HADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|254282519|ref|ZP_04957487.1| geranyltranstransferase [gamma proteobacterium NOR51-B] gi|219678722|gb|EED35071.1| geranyltranstransferase [gamma proteobacterium NOR51-B] Length = 279 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/264 (28%), Positives = 130/264 (49%), Gaps = 16/264 (6%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLH 81 C D ++ +Y++ + GK+LR L TA ML N + +A AIE +H+ +L+H Sbjct: 11 CPDPQLAA-AAEYVLANPGKQLRAKLVRETAAMLGSADPNCGVETVATAIELLHSYSLVH 69 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 DD+ +D+ LRRG+ + T++LVGD ++AF ++ S A + + L A Sbjct: 70 DDLPAMDNDDLRRGRPTVHRAFDEATAILVGDGFQARAFEIIARDSSLSAEQRVELFALL 129 Query: 140 LAEGELRQLSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + + LD+ E + + + KT L AA+ +++AG Sbjct: 130 SQAVGFEGMVGGQALDMAAEHQQCGIAELTRLHRLKTGALIQAAVVGGAIVAGANRETLD 189 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L ++ MNLG+AFQ++DDVLD +++GK G+D +GK T L G K E Sbjct: 190 RLATFAMNLGLAFQVIDDVLDVTACSDDLGKTAGKDAISGKSTYVTCLGID-GAKAE--- 245 Query: 253 WKSTINDGKISVENLKKAFIIMRE 276 +N+ ++E ++ + +R+ Sbjct: 246 AARLLNEAVDALEPFGESALALRD 269 >gi|54298220|ref|YP_124589.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris] gi|53752005|emb|CAH13431.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris] Length = 298 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/245 (31%), Positives = 117/245 (47%), Gaps = 25/245 (10%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHT 76 +L I I + Y +FSGGKR+RP+L +++ D VL +A A+E H Sbjct: 20 LLNEIIIPAPKIRSALHYALFSGGKRIRPILVYLAGDLIDV--DQGVLDIIAAALELTHC 77 Query: 77 ATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 +L+HDD+ +D+ LRRGK + + T++LVGD + + A +V+ T+ L A Sbjct: 78 YSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVVL-TRLSPLLPAAQ 136 Query: 135 LVACT-----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +VA T + G+ LS L VTEE + KT L A E ++ Sbjct: 137 VVAITQVLVNASGISGMVSGQSLDLSELAKLSVTEEQLREIHLLKTGKLILACFE---MV 193 Query: 184 AGVQNSV----RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 QN V + ALK+YG ++G+ FQ+ DD LD +GK D N K T + Sbjct: 194 LAAQNEVSEQIKSALKTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSSDQANQKTTFATL 253 Query: 240 LAFQR 244 Q+ Sbjct: 254 FNKQQ 258 >gi|116254354|ref|YP_770192.1| geranyltranstransferase [Rhizobium leguminosarum bv. viciae 3841] gi|115259002|emb|CAK10111.1| putative geranyltranstransferase [Rhizobium leguminosarum bv. viciae 3841] Length = 304 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 10/219 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + D + Y + +GGKRLRP L + +A +L + + + A+E +H +L+HDD+ Sbjct: 40 ETLRDAMHYAVLNGGKRLRPFLVVESAALLGGDAEAALRVGAALECVHCYSLVHDDLPAM 99 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-LEALSLVACTLAEGE 144 LRRGK + + T++L GD LL+ AF ++ ++ A SLV Sbjct: 100 DDDDLRRGKPTVHIKFDEATAILAGDSLLTYAFDIIAAPETTLADTSKASLVLALARAAG 159 Query: 145 LRQLSLSKNLDVTEE----DYLHVIK---SKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L ++ + LD+ E D +I+ KT L A E ++I+G R+ L+++ Sbjct: 160 LGGMAGGQALDLAAEKQAPDEAGIIRLQAMKTGALIRFACEAGAVISGSLAEDRRRLRAF 219 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G +G+AFQL DD+LD + MGK G+D GK TL Sbjct: 220 GEKIGLAFQLADDILDLTSDAATMGKATGKDAARGKGTL 258 >gi|37679053|ref|NP_933662.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] gi|37197795|dbj|BAC93633.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] Length = 298 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 12/253 (4%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L L ++ + + ++Y + GGKR RP L AT ML + A AIE IH Sbjct: 22 LWLDKLPHQNQALIQAMRYGLVLGGKRARPFLVYATGEMLGCSQEQLDTPASAIECIHAY 81 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQEA 129 +L+HDD+ +DD LRRG+ + + T++L GD L + AF ++ E ++Q Sbjct: 82 SLIHDDLPAMDDDELRRGQPTCHVKFDEATAILTGDALQTLAFTILAEGTLSPDGETQRV 141 Query: 130 LEALSLVACTLAEGELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +L + A+G +L ++N VT E+ + ++KT L A+ + +L AG Sbjct: 142 AMIQALAQASGAQGMCIGQALDLAAENRAVTLEELEEIHRNKTGALIRCAVRLGALAAGE 201 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + ++ L+ + +G+AFQ+ DD+LD + +GK G D K T P +L + Sbjct: 202 KGLAILPQLEKFSTAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLLGLEGA 261 Query: 246 TKREKNFWKSTIN 258 ++ + Sbjct: 262 MEKAHTLLHEALQ 274 >gi|156042580|ref|XP_001587847.1| hypothetical protein SS1G_11088 [Sclerotinia sclerotiorum 1980] gi|154695474|gb|EDN95212.1| hypothetical protein SS1G_11088 [Sclerotinia sclerotiorum 1980 UF-70] Length = 220 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 104/228 (45%), Gaps = 24/228 (10%) Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEED- 160 +VL GDFLLS+A + + E E L+ V L EGE QL + KN TEE Sbjct: 2 AVLAGDFLLSRASVALARLRDAEVTELLATVIANLVEGEFMQLKNTAQDEKNPVWTEETI 61 Query: 161 --YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 YL K+A L S + ++L+ G A YG NLG+AFQLVDD+LDY Sbjct: 62 SYYLQKTYLKSASLISKSCRAAALLGGSDAVTVDAAYDYGKNLGLAFQLVDDMLDYTITE 121 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR--- 275 E+GK G D G T P+I A WK+ G + + ++R Sbjct: 122 KELGKPAGADLELGLATAPLIFA-----------WKNNRELGSLVGRKFSQEGDVLRARE 170 Query: 276 ---ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ L T A Y +A ++ P+S K L+E+ D L+R Sbjct: 171 LVLQSDGLEQTRALAEEYANRAISAISAFPESEAKDGLIEMADKTLKR 218 >gi|55821223|ref|YP_139665.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus LMG 18311] gi|55823135|ref|YP_141576.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus CNRZ1066] gi|55737208|gb|AAV60850.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus LMG 18311] gi|55739120|gb|AAV62761.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus CNRZ1066] Length = 290 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 116/229 (50%), Gaps = 31/229 (13%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDV--VDDSA 89 Y + SGGKR+RP++ L +LE G +H +A ++E IHT +L+HDD+ +D+ Sbjct: 32 YSVDSGGKRIRPLIFLD---LLEGFGLELTPSHFDVAASLEMIHTGSLIHDDLPAMDNDD 88 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVACTLA--- 141 RRG++ + T++L GD L F +V +T+ + + ALS + T Sbjct: 89 YRRGRLTNHKKFDEATAILAGDSLFLDPFALVAQTELSAEIRVQLIHALSHASGTFGMVG 148 Query: 142 ------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 +GE +L LS+ + E +KT L + + ++A ++ V + L+ Sbjct: 149 GQMLDMKGEGLELDLSQLAKIHE--------NKTGKLLTFPFVAAGIVAQQEDRVMENLQ 200 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G +G+AFQ+ DD+LD + +GK G+D GK T P +L ++ Sbjct: 201 EAGRLIGLAFQVRDDILDVTADFESLGKTPGKDVVAGKSTYPALLGLEK 249 >gi|330939927|gb|EGH43133.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B] Length = 295 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 16/239 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 + K ++E + ++Y + +GGKR+RP+L A L ++ ACA+E IH + Sbjct: 20 LFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYS 79 Query: 79 LLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALS 134 L+H +DD LRRG+ + ++L GD L S AF ++ S++A L Sbjct: 80 LVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLTPHLTSRDAETRLQ 139 Query: 135 LV-ACTLAEGELRQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +V A A G + S+ LD +Y+H + KT L A++ + +L +G Sbjct: 140 MVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASG 197 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + R AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 198 HADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|313623887|gb|EFR94002.1| geranyltranstransferase [Listeria innocua FSL J1-023] Length = 293 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 10/225 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRG 93 Y + +GGKR+RPML AT L + A A+E IHT +L+HDD+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALNIEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----CTLAEGEL--RQ 147 K ++G+ T++L GD LL+ AF ++ E ++ ++L+ + AEG + +Q Sbjct: 98 KWTNHKIYGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISYSSGAEGMVGGQQ 157 Query: 148 LSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + ++N VT E+ + KT L A+ ++ IA + L+ + N+GI FQ Sbjct: 158 ADMEAENKQVTLEELASIHARKTGELLIFAVTSAAKIAEATPEQTKRLRIFAENIGIGFQ 217 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + DD+LD G+ +MGK G D K T P +L + G KR N Sbjct: 218 ISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLE-GAKRALN 261 >gi|121588137|ref|ZP_01677884.1| geranyltranstransferase [Vibrio cholerae 2740-80] gi|121728346|ref|ZP_01681376.1| geranyltranstransferase [Vibrio cholerae V52] gi|147674651|ref|YP_001216368.1| geranyltranstransferase [Vibrio cholerae O395] gi|153817233|ref|ZP_01969900.1| geranyltranstransferase [Vibrio cholerae NCTC 8457] gi|227081066|ref|YP_002809617.1| geranyltranstransferase [Vibrio cholerae M66-2] gi|229505505|ref|ZP_04395015.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|262168689|ref|ZP_06036384.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] gi|298498988|ref|ZP_07008795.1| geranyltranstransferase [Vibrio cholerae MAK 757] gi|121547628|gb|EAX57727.1| geranyltranstransferase [Vibrio cholerae 2740-80] gi|121629401|gb|EAX61831.1| geranyltranstransferase [Vibrio cholerae V52] gi|126512267|gb|EAZ74861.1| geranyltranstransferase [Vibrio cholerae NCTC 8457] gi|146316534|gb|ABQ21073.1| geranyltranstransferase [Vibrio cholerae O395] gi|227008954|gb|ACP05166.1| geranyltranstransferase [Vibrio cholerae M66-2] gi|227012710|gb|ACP08920.1| geranyltranstransferase [Vibrio cholerae O395] gi|229357728|gb|EEO22645.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|262022807|gb|EEY41513.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] gi|297543321|gb|EFH79371.1| geranyltranstransferase [Vibrio cholerae MAK 757] Length = 294 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 12/241 (4%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L RI + + ++Y + GGKR RP L T ML + A A+E IH +L Sbjct: 20 LNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSL 79 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 80 IHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAM 139 Query: 138 C-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN 188 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG + Sbjct: 140 IQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKG 199 Query: 189 -SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ L Y +G+AFQ+ DD+LD + +GK G D K T P +L + + Sbjct: 200 RAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQ 259 Query: 248 R 248 + Sbjct: 260 K 260 >gi|303247299|ref|ZP_07333573.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ] gi|302491458|gb|EFL51346.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ] Length = 299 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 112/224 (50%), Gaps = 17/224 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y + +GGKRLRP L L+ A + + + A E IHT +L+HDD+ L Sbjct: 38 AMEYSLMAGGKRLRPCLCLSFAELFGAPRASVMPFAAGFELIHTYSLIHDDLPAMDDDDL 97 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEA-----------LSLVAC 138 RRG+ + V+G ++L GD LL++AF CM ++S A+ A + A Sbjct: 98 RRGRPSNHKVFGEAGAILAGDALLTEAFGCM---SRSWPAVAAELVLPALAEAGRAAGAA 154 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G++ + + VT + H+ KT L +A+ +++AG + YG Sbjct: 155 GMVGGQMLDMEFTARQGVTLAELAHMQALKTGALITASCVCGAILAGAAEDGISRAREYG 214 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G AFQ+VDD+LD G+ MGK +G D GK T P ++ Sbjct: 215 EAVGAAFQIVDDILDEVGDAATMGKPVGSDREQGKSTYPSLVGL 258 >gi|188534651|ref|YP_001908448.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99] gi|188029693|emb|CAO97572.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99] Length = 299 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 16/241 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L AT ML A A+E IH +L+HDD+ +D+ + Sbjct: 34 NAIEYGALLGGKRLRPFLVYATGNMLHADDAALDAPAAAVECIHAYSLIHDDLPAMDNDS 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-------IETKSQEA----LEALSLVAC 138 LRRG+ + +G ++L GD L + AF ++ + +S+ A L S VA Sbjct: 94 LRRGQPTCHIKFGEDAAILAGDALQTLAFSILADAPMPGVTAESRVAMLSELAQASGVAG 153 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSY 197 L + K + + E + +H + KT L +A+ + +L AG + AL + Sbjct: 154 MCGGQALDLAAEGKRVTLDELEQIH--RHKTGALIRSAVRLGALSAGAPGRAALPALDRF 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ +GK G D + GK T P ++ + + + ++ ++ Sbjct: 212 ADAIGLAFQVQDDILDVIGDTVVLGKQQGADQQLGKSTYPALMGLENARLKAWDLYQESL 271 Query: 258 N 258 N Sbjct: 272 N 272 >gi|16800468|ref|NP_470736.1| hypothetical protein lin1400 [Listeria innocua Clip11262] gi|16413873|emb|CAC96631.1| lin1400 [Listeria innocua Clip11262] Length = 293 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 10/225 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRG 93 Y + +GGKR+RPML AT L + A A+E IHT +L+HDD+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALNIEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----CTLAEGEL--RQ 147 K ++G+ T++L GD LL+ AF ++ E ++ ++L+ + AEG + +Q Sbjct: 98 KWTNHKIYGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISYSSGAEGMVGGQQ 157 Query: 148 LSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + ++N VT E+ + KT L A+ ++ IA + L+ + N+GI FQ Sbjct: 158 ADMEAENKQVTLEELASIHARKTGELLIFAVTSAAKIAEATPEQTKRLRIFAENIGIGFQ 217 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + DD+LD G+ +MGK G D K T P +L + G KR N Sbjct: 218 ISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLE-GAKRALN 261 >gi|114563954|ref|YP_751468.1| polyprenyl synthetase [Shewanella frigidimarina NCIMB 400] gi|114335247|gb|ABI72629.1| farnesyl-diphosphate synthase [Shewanella frigidimarina NCIMB 400] Length = 293 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 21/257 (8%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFS---GGKRLRPMLTLATALMLEY 59 ML + +VN ++ + + + PD+ ++ GGKR+RP L + ML Sbjct: 1 MLAEAITTYQNRVNGILNQHLTLLDDAAPDLKAAMLHGALLGGKRIRPFLVYSVGDMLGV 60 Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 + A AIE IH +L+HDD+ +D+ ALRRG+ + + T++L GD L + A Sbjct: 61 NINALDKAAAAIECIHAYSLIHDDLPAMDNDALRRGQPTVHIAFDEATAILAGDALQTLA 120 Query: 118 F------CMVIETKSQEALEALSLVA------CTLAEGELRQLSLSKNLDVTEEDYLHVI 165 F C + K Q A+ + A C +L S NLD E LH Sbjct: 121 FEIITAPCNDLHPKQQLAMVRVLAKASGYQGMCGGQAIDLSATDHSINLDRLTE--LH-- 176 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KT L S A+E++ + A V + + + Y LG+AFQ+ DD+LD E+GK Sbjct: 177 NKKTGALISCAVELALIAADVPDEHYKLMMKYAHTLGLAFQVQDDILDITASTEELGKPQ 236 Query: 226 GEDFRNGKPTLPVILAF 242 G D ++ K T P +L Sbjct: 237 GSDQQSNKSTFPKLLGL 253 >gi|153216011|ref|ZP_01950233.1| geranyltranstransferase [Vibrio cholerae 1587] gi|124114524|gb|EAY33344.1| geranyltranstransferase [Vibrio cholerae 1587] Length = 294 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 12/241 (4%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L RI + + ++Y + GGKR RP L T ML + A A+E IH +L Sbjct: 20 LNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSL 79 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 80 IHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGTLSAAGETQRVAM 139 Query: 138 C-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN 188 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG + Sbjct: 140 IQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKG 199 Query: 189 -SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ L Y +G+AFQ+ DD+LD + +GK G D K T P +L + + Sbjct: 200 RAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQ 259 Query: 248 R 248 + Sbjct: 260 K 260 >gi|21243489|ref|NP_643071.1| farnesyl-diphosphate synthase [Xanthomonas axonopodis pv. citri str. 306] gi|21109048|gb|AAM37607.1| geranyltranstransferase [Xanthomonas axonopodis pv. citri str. 306] Length = 291 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 8/218 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +++ + GGKR+RP+L A+ + D A A+E IH +L+HDD+ +DD AL Sbjct: 34 AMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTLAEGEL 145 RRG+ + + T++L GD L ++AF ++ + +++L+ A Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTRAFELLAAASASAELRVGWMQSLATAAGAAGMCGG 153 Query: 146 RQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L + + +L + + KT L AA+ + +L G + +Q L + LG+A Sbjct: 154 QALDIDATGQLQSLQHLQRMHALKTGALIRAAVRMGALTGGAALADQQRLDEFADALGLA 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 FQ+ DD+LD ++GK G+D K T P +L Sbjct: 214 FQVRDDILDVESSSAQLGKTAGKDAAQSKSTYPALLGM 251 >gi|260220841|emb|CBA28811.1| Probable geranyltranstransferase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 341 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 16/227 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDN----HVLLACAIEFIHTATLLHDDV--V 85 D ++Y + GGKRLRP+L LA + G + ACA+E IH +L+HDD+ + Sbjct: 76 DAMRYAVLDGGKRLRPLLVLAAHEAVAELGHGCDAAALRAACAVELIHAYSLVHDDMPCM 135 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---------ALEALSLV 136 D+ LRRGK + +G +++L GD L + AF + L A + Sbjct: 136 DNDVLRRGKPTVHVQFGEASALLAGDALQALAFEFLTPLDGSVPCTVQARLCGLLARAAG 195 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + +A G+ L+ S L +TE + + KT L ++ + + A V L++ Sbjct: 196 SSGMAGGQAIDLA-SVGLPLTENQLREMHQLKTGALLQGSVVMGAQCAQPTAQVLSGLEA 254 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 YG +G+AFQ+VDD+LD + +GK G+D N KPT ++ Q Sbjct: 255 YGAAIGLAFQVVDDILDVTADSATLGKTAGKDADNDKPTYVSLMGLQ 301 >gi|23502633|ref|NP_698760.1| geranyltranstransferase [Brucella suis 1330] gi|161619701|ref|YP_001593588.1| polyprenyl synthetase [Brucella canis ATCC 23365] gi|254703547|ref|ZP_05165375.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] gi|260568852|ref|ZP_05839320.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261754180|ref|ZP_05997889.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] gi|23348639|gb|AAN30675.1| geranyltranstransferase [Brucella suis 1330] gi|161336512|gb|ABX62817.1| Polyprenyl synthetase [Brucella canis ATCC 23365] gi|260154236|gb|EEW89318.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261743933|gb|EEY31859.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] Length = 304 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 12/215 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L L +A + G + +A A+E IH +L+HDD+ L Sbjct: 45 AMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDL 104 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV-ACTLAEGELRQL 148 RRG+ + ++L GD LL+ AF ++ +++ +A + LV A T A G L + Sbjct: 105 RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIASDETELDATTRIKLVCALTRASG-LGGM 163 Query: 149 SLSKNLDVTEE----DYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ E D +I KT L A E ++IAG R+ + +G + Sbjct: 164 AGGQALDLMAETRKPDEASIITLQAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAI 223 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + MGK G+D GK TL Sbjct: 224 GLAFQLADDLLDVTADAGTMGKATGKDAAAGKATL 258 >gi|15640906|ref|NP_230537.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|153823688|ref|ZP_01976355.1| geranyltranstransferase [Vibrio cholerae B33] gi|229510825|ref|ZP_04400304.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229517946|ref|ZP_04407390.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229608524|ref|YP_002879172.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|254848025|ref|ZP_05237375.1| geranyltranstransferase [Vibrio cholerae MO10] gi|255744681|ref|ZP_05418632.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262161186|ref|ZP_06030297.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1] gi|9655345|gb|AAF94052.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126518791|gb|EAZ76014.1| geranyltranstransferase [Vibrio cholerae B33] gi|229344661|gb|EEO09635.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229350790|gb|EEO15731.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229371179|gb|ACQ61602.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|254843730|gb|EET22144.1| geranyltranstransferase [Vibrio cholerae MO10] gi|255737712|gb|EET93106.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262028936|gb|EEY47589.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1] Length = 294 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 12/241 (4%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L RI + + ++Y + GGKR RP L T ML + A A+E IH +L Sbjct: 20 LNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSL 79 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 80 IHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAM 139 Query: 138 C-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN 188 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG + Sbjct: 140 LQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKG 199 Query: 189 -SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ L Y +G+AFQ+ DD+LD + +GK G D K T P +L + + Sbjct: 200 RAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQ 259 Query: 248 R 248 + Sbjct: 260 K 260 >gi|153827049|ref|ZP_01979716.1| geranyltranstransferase [Vibrio cholerae MZO-2] gi|229513011|ref|ZP_04402477.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] gi|229525505|ref|ZP_04414910.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|254225115|ref|ZP_04918729.1| geranyltranstransferase [Vibrio cholerae V51] gi|262191492|ref|ZP_06049677.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae CT 5369-93] gi|297581274|ref|ZP_06943198.1| geranyltranstransferase [Vibrio cholerae RC385] gi|125622502|gb|EAZ50822.1| geranyltranstransferase [Vibrio cholerae V51] gi|149739090|gb|EDM53386.1| geranyltranstransferase [Vibrio cholerae MZO-2] gi|229339086|gb|EEO04103.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|229349904|gb|EEO14858.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] gi|262032640|gb|EEY51193.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae CT 5369-93] gi|297534590|gb|EFH73427.1| geranyltranstransferase [Vibrio cholerae RC385] gi|327483628|gb|AEA78035.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4] Length = 294 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 12/241 (4%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L RI + + ++Y + GGKR RP L T ML + A A+E IH +L Sbjct: 20 LNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSL 79 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 80 IHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGALSAAGETQRVAM 139 Query: 138 C-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN 188 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG + Sbjct: 140 IQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKG 199 Query: 189 -SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ L Y +G+AFQ+ DD+LD + +GK G D K T P +L + + Sbjct: 200 RAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQ 259 Query: 248 R 248 + Sbjct: 260 K 260 >gi|269837416|ref|YP_003319644.1| polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745] gi|269786679|gb|ACZ38822.1| Polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745] Length = 346 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 8/207 (3%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GKR+RP++ + D V A +IE +H TL+HDDV D S RR + +W Sbjct: 57 GKRIRPLICVLACAAAGGDPDVAVPTAASIELLHNFTLVHDDVQDGSDRRRHRPTVWALW 116 Query: 102 GNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLV------ACTLAEGELRQLSLSKN 153 G ++ GD F LSQ + + + + + EG++ L + Sbjct: 117 GVGQAINAGDALFALSQLPLLGSHARGVPPARVIGVAREFNATVLRIVEGQVLDLCFEER 176 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 ++ YL++I+ KTA L + A +++AG + +++G LG+ FQ+ DD+L Sbjct: 177 WEIPVASYLNMIEGKTASLVAFAAWSGAVLAGADAERAERYRAFGRALGLGFQVQDDLLG 236 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVIL 240 GE GK G+D R K +LPV+L Sbjct: 237 IWGEAEVTGKPAGDDIRRRKKSLPVLL 263 >gi|71027225|ref|XP_763256.1| prenyl transferase [Theileria parva strain Muguga] gi|68350209|gb|EAN30973.1| prenyl transferase, putative [Theileria parva] Length = 453 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 101/174 (58%), Gaps = 3/174 (1%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 L + E IH +L+HDD++D+S +RR +++ +G + SVL GDFLLS++ ++ ++ Sbjct: 166 LNISYELIHIGSLIHDDIIDESDVRRNLMSSHKKFGVKFSVLFGDFLLSKSAQIITSLQN 225 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL-EVSSLIAG 185 + ++ LS L GEL ++L+ N D+ YL+ I KTA L S + VS L Sbjct: 226 IKLVDKLSNTLDNLIHGELMYVNLNNN-DLYLS-YLYKIYLKTASLISNNISSVSHLTNQ 283 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + L G+++G++FQ+ DD+LDY + +GK I D + G TLP+I Sbjct: 284 YNFQLDELLYIIGVHIGLSFQMCDDLLDYNSNLEHLGKPILNDIKLGLITLPLI 337 >gi|327473380|gb|EGF18800.1| geranyltranstransferase [Streptococcus sanguinis SK408] Length = 291 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 34/262 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEF 73 +F +++ SD + +V+ Y + +GGKR+RP+L L A LE + H +A A+E Sbjct: 16 DFYRSQQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLEL-AEAHYQVASALEM 71 Query: 74 IHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQ-- 127 IHT +L+HDD+ RRG++ + +G ++L GD L + ++ E SQ Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVK 131 Query: 128 -EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + LSL A + +GE + +SL D + +KT L + Sbjct: 132 VDLISELSLAAGSFGMVAGQVLDMQGEGQAISLG--------DLKTIHANKTGKLLTYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LI Q SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T P Sbjct: 184 VAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTIND 259 L G KNF+ T+N+ Sbjct: 244 AFL----GLDGSKNFFNQTLNE 261 >gi|322367991|ref|ZP_08042560.1| farnesyl-pyrrophosphate synthase [Haladaptatus paucihalophilus DX253] gi|320552007|gb|EFW93652.1| farnesyl-pyrrophosphate synthase [Haladaptatus paucihalophilus DX253] Length = 276 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 5/201 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 + SGGKR+RP + + +N V IE +H A+L+ DD++D S +RRG Sbjct: 29 HTALSGGKRVRPTVAMLACEAAGGDAENAVDFGVGIELVHDASLVVDDIIDRSDVRRGTE 88 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 +A +G +++ D +L +AF + + A+E ++ L GE +L + + Sbjct: 89 SAWAEYGYGRAIIASDGMLGEAFELF--SSDPRAMEVVAESMIELGMGEASELVATPS-- 144 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 + +Y+ + + KT LF AA E+ ++ A A Y +GIAFQ+ DDVLD Sbjct: 145 -NQSEYMELARRKTGALFRAAAELGAIAADADPETIDAFGEYAERVGIAFQIRDDVLDAT 203 Query: 216 GEVNEMGKNIGEDFRNGKPTL 236 + +++GK G+D G+P++ Sbjct: 204 ADPDDLGKPTGQDEEIGRPSI 224 >gi|310689999|pdb|3P8R|A Chain A, Crystal Structure Of Polyprenyl Synthase From Vibrio Cholerae Length = 302 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 12/241 (4%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L RI + + ++Y + GGKR RP L T ML + A A+E IH +L Sbjct: 28 LNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSL 87 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 88 IHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAM 147 Query: 138 C-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN 188 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG + Sbjct: 148 LQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKG 207 Query: 189 -SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ L Y +G+AFQ+ DD+LD + +GK G D K T P +L + + Sbjct: 208 RAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQ 267 Query: 248 R 248 + Sbjct: 268 K 268 >gi|262172097|ref|ZP_06039775.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] gi|261893173|gb|EEY39159.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] Length = 294 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/245 (31%), Positives = 117/245 (47%), Gaps = 14/245 (5%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L L RI + + ++Y + GGKR RP L T ML A A+E IH Sbjct: 18 LWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSELDTPASAVECIHAY 77 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 +L+HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 78 SLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDALQTLAFTILAEGTLSPAGETQRV 137 Query: 136 VAC-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGV 186 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG Sbjct: 138 AMIQALAEASGAQGMCLGQALDLAAENRLVSLEELETIHRNKTGALMRCAIRLGALAAGE 197 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + ++ L Y +G+AFQ+ DD+LD + +GK G D K T P +L + Sbjct: 198 KGRAILLHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLE-- 255 Query: 246 TKREK 250 REK Sbjct: 256 GAREK 260 >gi|283797528|ref|ZP_06346681.1| geranyltranstransferase [Clostridium sp. M62/1] gi|291074897|gb|EFE12261.1| geranyltranstransferase [Clostridium sp. M62/1] Length = 298 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 24/245 (9%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++ E++ F L + + I + + Y + +GGKRLRP+L + +G Sbjct: 12 RETEEIVFSYLPQETGHQKTIFEAMNYSVRAGGKRLRPLLMREVYRLFGGQGKEVEPFMA 71 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IHT++L+HDD+ +D+ RRGK + +G +VL GD LL A +ET S+ Sbjct: 72 AIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDALLIYA----VETASR 127 Query: 128 EALEALSLVAC--------TLAE---------GELRQLSLSKNLDVTEEDYLHVIKSKTA 170 L V L+E G+ + L+ N V E + + KT Sbjct: 128 AFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELT-NKPVPREKLDFIYRLKTG 186 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L A++ + +++AG ++ N+G+AFQ+ DD+LD G +GK +G D + Sbjct: 187 ALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTGNEEVIGKPVGSDEK 246 Query: 231 NGKPT 235 N K T Sbjct: 247 NHKTT 251 >gi|126445573|ref|YP_001062715.1| polyprenyl synthetase [Burkholderia pseudomallei 668] gi|126225064|gb|ABN88569.1| geranyltranstransferase [Burkholderia pseudomallei 668] Length = 322 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 123/241 (51%), Gaps = 20/241 (8%) Query: 20 LKRI--CSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L RI C+D + + ++Y +F GGKRLRP+L A +++ + ++ IE IH Sbjct: 44 LDRILPCADGRLTALHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIH 103 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-- 131 +L+ DD+ +D+ LR G++ + T++L D L+SQAF + E + Sbjct: 104 VFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAFLALSEAPLPLDVRVA 163 Query: 132 -----ALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL--- 182 A S+ L G+ L S+ +LD TE + +H + KT L AA+ + L Sbjct: 164 LMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMH--RMKTGALIRAAVRMGVLCGT 221 Query: 183 IAGVQ-NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + GV+ + +A+ YG LG+A+Q+VDD+LD + +GK G+D R K T +L Sbjct: 222 VPGVELGAAWRAVSEYGERLGLAYQVVDDILDSTAATSVLGKTAGKDARANKATYVTVLG 281 Query: 242 F 242 Sbjct: 282 L 282 >gi|332363439|gb|EGJ41222.1| geranyltranstransferase [Streptococcus sanguinis SK355] Length = 291 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 35/269 (13%) Query: 12 MEKVNFLILKRICSDVEMIPD---VVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVL 66 +EK+ L ++ ++ PD V+ Y + +GGKR+RP+L L A LE + H Sbjct: 7 LEKIG-LTIEDFYKSQQVSPDLSEVILYSVQAGGKRIRPLLLLELIQAFGLELT-EAHYQ 64 Query: 67 LACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-- 122 +A A+E IHT +L+HDD+ RRG++ + +G ++L GD L + ++ Sbjct: 65 VAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARA 124 Query: 123 ETKSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTA 170 E SQ + + LSL A + +GE + +SL ED ++ +KT Sbjct: 125 ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISL--------EDLKNIHANKTG 176 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L + + LI Q SV+ L+ G LG+AFQ+ DD+LD E+GK +D Sbjct: 177 KLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLA 236 Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTIND 259 K T P L G KNF+ T+++ Sbjct: 237 AAKSTYPAFL----GLDGAKNFFNQTLDE 261 >gi|259909275|ref|YP_002649631.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96] gi|224964897|emb|CAX56420.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96] gi|283479330|emb|CAY75246.1| geranyltranstransferase [Erwinia pyrifoliae DSM 12163] Length = 299 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 16/241 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L AT ML A AIE IH +L+HDD+ +D+ + Sbjct: 34 NAMEYGALLGGKRLRPFLVYATGDMLRANDAALDAPAAAIECIHAYSLIHDDLPAMDNDS 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLVA-----CT 139 LRRG+ + +G + ++L GD L + AF ++ + ++ + LS +A Sbjct: 94 LRRGQPTCHIKFGEEAAILAGDALQTLAFSILADAPMPGVVAESRIAMLSELAQASGVAG 153 Query: 140 LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSY 197 + G+ L+ K + + E + +H + KT L +A+ + +L AG + + AL + Sbjct: 154 MCGGQALDLAAEGKQVTLNELEQIH--RHKTGALIRSAVRLGALTAGERGRAALPALDRF 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ +GK G D + GK T P ++ + + ++ Sbjct: 212 ANAIGLAFQVQDDILDVTGDTEVLGKQQGADQQLGKSTYPALMGLDNARIKAWELCQESL 271 Query: 258 N 258 N Sbjct: 272 N 272 >gi|166711441|ref|ZP_02242648.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 291 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 8/218 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +++ + GGKR+RP+L A+ + D A A+E IH +L+HDD+ +DD AL Sbjct: 34 AMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTLAEGEL 145 RRG+ + + T++L GD L ++AF ++ + +++L+ A Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTRAFELLAAASASAELRVGWMQSLATAAGAAGMCGG 153 Query: 146 RQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L + + +D + KT L A++ + +L G + +Q L + LG+A Sbjct: 154 QALDIDATGQLQPLQDLQRMHALKTGALIRASVHMGALTGGAATADQQRLDEFADALGLA 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 FQ+ DD+LD ++GK G+D + K T P +L Sbjct: 214 FQVRDDILDVESSSAQLGKTAGKDAAHSKSTYPALLGM 251 >gi|50952782|gb|AAT90315.1| putative geranylgeranyl pyrophosphate synthetase [uncultured proteobacterium eBACred25D05] Length = 308 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 28/219 (12%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH----VLLACAIEFIHTATLLHDDV--V 85 D ++Y +F GG R+RP + L+ A+ GD++ A A+E IH A+L+HDD+ Sbjct: 48 DAIQYSVFPGGARIRPTILLSVAVAC---GDDNPSLANASAAALEMIHCASLVHDDLPCF 104 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC------- 138 D++ RRGK + +G T+VLVGD L++ AF ++ ++A+ A L+A Sbjct: 105 DNAETRRGKPSVHNKYGEPTAVLVGDSLIANAFGVIARAADKDAVRAAKLIALLSKYTGF 164 Query: 139 --TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + G+ + +S +L + +KT LF AA ++ + AG + Sbjct: 165 PKGICAGQAWEAEISVDLSAYHQ-------TKTGALFIAATQMGAASAGHDP---EPWFE 214 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 G +G AFQ+ DD+LD +E GK G+D N +P Sbjct: 215 LGARIGEAFQVADDLLDVLCSEDETGKPSGQDVTNQRPN 253 >gi|308174223|ref|YP_003920928.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7] gi|307607087|emb|CBI43458.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7] gi|328554168|gb|AEB24660.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208] gi|328912560|gb|AEB64156.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3] Length = 296 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 27/235 (11%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 +P+ +K Y + +GGKRLRP++ LA + + + CA+E IHT +L+HDD+ Sbjct: 29 MPESLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLP 88 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--------------- 128 LRRGK V+G +VL GD LL+++F ++ S+E Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKLITSHVSEEVSAEKRLRLVDELIS 148 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A +V A+ E Q K + + E + +H + KTA L ++ +++A Sbjct: 149 AAGTEGMVGGQAADMEAEQ----KQVTLKELESIH--ERKTAKLLGFSVTAGAILADAPE 202 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + L+ + ++GI FQ+ DD+LD G ++GK +G D N K T P +L + Sbjct: 203 DEIEKLRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVGSDTTNEKSTYPSLLTLE 257 >gi|257456101|ref|ZP_05621302.1| polyprenyl synthetase family protein [Treponema vincentii ATCC 35580] gi|257446487|gb|EEV21529.1| polyprenyl synthetase family protein [Treponema vincentii ATCC 35580] Length = 334 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 81/285 (28%), Positives = 129/285 (45%), Gaps = 31/285 (10%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 L+ GGKR RP+L + + G+ L IE IHTA+L+HDD+ D+S LRRG+ A Sbjct: 44 LVAGGGKRWRPLLAVLAYQLAGGSGEEIYTLTPLIEGIHTASLIHDDIEDNSELRRGQPA 103 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 A + +G +++ G +L QA +E A L L A L +R L + LD+ Sbjct: 104 AHVAYGLDSALNSGSWLYFQALG-SLEAYRAPANVKLDLYAAALT--HIRALHEGQALDI 160 Query: 157 ----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + +DY +I+ KT L + A AG + A S G+ FQ Sbjct: 161 HWHRTAGFFPSRKDYERMIRLKTGALAALAAYTGMRAAGKAHEESAAFASLFEAAGVGFQ 220 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK---NFWKSTINDGKIS 263 ++DD + GK G+D GK +LPVIL ++ + +++ +G I Sbjct: 221 ILDDAKNI--SAGNAGKKRGDDIVEGKKSLPVILHIEKHPEDAAALTAYFEQAQREG-IE 277 Query: 264 VENLKKAFIIMRENRALVDTEYRAYS------------YGQKAKD 296 ++KA ++ + ++ D E + YG+ AKD Sbjct: 278 SPAVEKAIALLSASGSIADAETQGRGAVHSVLERLDVRYGRTAKD 322 >gi|254481105|ref|ZP_05094351.1| polyprenyl synthetase superfamily protein [marine gamma proteobacterium HTCC2148] gi|214038900|gb|EEB79561.1| polyprenyl synthetase superfamily protein [marine gamma proteobacterium HTCC2148] Length = 303 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 16/236 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHV----LLACAIEFIHTATLLHDDVVDDSA-- 89 Y + SGGKR+RP + A + G H +CA+E +HT +L+HDD+ Sbjct: 47 YSLASGGKRVRPAILYFAAQCV---GGGHCESLDQASCALELVHTYSLIHDDLPAMDDDD 103 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 +RRGK + + T++LVGD L ++AF ++I+ + A + + +V L+ + Sbjct: 104 MRRGKPSLHKAYEESTAILVGDGLQARAFELLIDAPNLTAEQKIRMVKVLAEAAGLKGMV 163 Query: 150 LSKNLDVTEE------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + +D+ D L + S KT L A+L + + A AL YG ++G Sbjct: 164 GGQYIDIQVTGADITLDELQAMHSMKTGALIRASLALGGIAANATEEQLAALDEYGTHIG 223 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +AFQ+ DD+LD G+ +GK G+D KPT +L + + K+ + Sbjct: 224 LAFQVADDILDVEGDAETLGKTQGKDAEANKPTYVKLLGLEGAKAEAQRLLKAALE 279 >gi|293652046|pdb|3M9U|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 gi|293652047|pdb|3M9U|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 gi|293652048|pdb|3M9U|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 gi|293652049|pdb|3M9U|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 gi|312208182|pdb|3PDE|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Isoprenyl Diphosphate And Magnesium gi|312208183|pdb|3PDE|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Isoprenyl Diphosphate And Magnesium gi|312208184|pdb|3PDE|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Isoprenyl Diphosphate And Magnesium gi|312208185|pdb|3PDE|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Isoprenyl Diphosphate And Magnesium Length = 309 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 86/303 (28%), Positives = 136/303 (44%), Gaps = 53/303 (17%) Query: 33 VVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDS 88 + Y + +GGKRLRP+LT+AT +L + + + H A+E +HT +L+HDD+ +D+ Sbjct: 39 AMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDND 98 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 ALRRG+ + +G + L GD LL+ AF + T ++A + A A G + Sbjct: 99 ALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMV 158 Query: 149 --------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 S NL +++ LH K KT L A++ ++ + A + Sbjct: 159 AGQAKDIQSEHVNLPLSQLRVLH--KEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADA 216 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 G+AFQ+ DD+LD EMGK +D K T P G Sbjct: 217 FGLAFQIYDDILDVVSSPAEMGKATQKDADEAKNTYP----------------------G 254 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD-FCLQ 319 K+ ++ N+AL+DT + GQ A L+ LP S+ + L F + Sbjct: 255 KLG---------LIGANQALIDTIHS----GQAA---LQGLPTSTQRDDLAAFFSYFDTE 298 Query: 320 RLN 322 R+N Sbjct: 299 RVN 301 >gi|238787986|ref|ZP_04631782.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641] gi|238723934|gb|EEQ15578.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641] Length = 306 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 91/299 (30%), Positives = 138/299 (46%), Gaps = 45/299 (15%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFS---GGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++VN IL I D+VK + + GGKRLRP L AT M N A Sbjct: 19 QRVNQAILDFIAPLPFGNSDLVKAMRYGAVLGGKRLRPYLVYATGQMFGLSLANLDAPAA 78 Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IH +L+HDD+ LRRG+ + +G ++L GD L + AF ++ E+ Sbjct: 79 AIECIHAYSLMHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAESPMP 138 Query: 128 EALEA--LSLVACTLA----------------EGELRQLSLSKNLDVTEEDYLHVIKSKT 169 + + LS++A LA E E RQ+SL +D + + KT Sbjct: 139 DVADKDRLSMIA-ELAYASGVAGMCGGQALDLEAEARQISL--------DDLEQIHRHKT 189 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALK---SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 L AA+ + +L AG R+AL Y +G+AFQ+ DD+LD G+ +GK G Sbjct: 190 GALIRAAVRLGALAAGAPG--REALPLLDRYANAIGLAFQVQDDILDVIGDTATIGKRQG 247 Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTIN------DGKISVENLK--KAFIIMREN 277 D + GK T P +L + + ++ I+ + ++ L+ FII R+N Sbjct: 248 SDQQLGKSTYPALLGLDCAKAKAMDLYQEAIDALNALSEQSYNIAPLQALACFIIERDN 306 >gi|322385057|ref|ZP_08058707.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100] gi|321270967|gb|EFX53877.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100] Length = 291 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 34/272 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFI 74 F K + +D + + + Y + +GGKR+RP+L L H +A A+E I Sbjct: 16 EFYQSKEVSAD---LTETILYSVEAGGKRIRPLLLLELLEGFGLELTPAHFQVAAALEMI 72 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQ--- 127 HT +L+HDD+ +D+ RRG++ + +G ++L GD L + +V +E SQ Sbjct: 73 HTGSLIHDDLPAMDNDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLVAMVELPSQVKV 132 Query: 128 EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAAL 177 + + LSL A + +GE R+L++ D L I + KT L + Sbjct: 133 DLIAELSLAAGSFGMVAGQVLDMQGEGRKLTM---------DQLQTIHANKTGKLLAYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +IA SV L+ G LG+AFQ+ DD+LD +++GK +D K T P Sbjct: 184 VAAGIIAQTSQSVLGKLRQAGELLGLAFQVRDDILDVTASFDQIGKTPQKDLAAEKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKK 269 +L G + F+ T+ K +E L+K Sbjct: 244 ALL----GLDGARAFFDETLEQAKSLLEQLEK 271 >gi|325109156|ref|YP_004270224.1| polyprenyl synthetase [Planctomyces brasiliensis DSM 5305] gi|324969424|gb|ADY60202.1| Polyprenyl synthetase [Planctomyces brasiliensis DSM 5305] Length = 314 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/254 (29%), Positives = 121/254 (47%), Gaps = 41/254 (16%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C D + + +Y + +GGKRLRP+L L +A + + + A AIE +HT +L+HDD Sbjct: 29 CPD--RLSEASRYSLLAGGKRLRPLLVLLSAQACSGKPEPGLPAALAIEMVHTYSLIHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL- 140 + LRRG+ + T++L GD LL++AF ET + ++ + V C L Sbjct: 87 LPAMDDDDLRRGRPTCHRQFDEATAILAGDGLLTRAF----ETLAAGIVDPATAVRCVLE 142 Query: 141 -------------------AEGELRQLSLSKNLDVTEEDYLH------------VIKSKT 169 AE Q+ SK+ + T E+ + + KT Sbjct: 143 LSRASGVEGMVGGQQADLDAEKRFEQIE-SKSSEETAENPAEPSDEAELQQLKAIHRRKT 201 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 L + A+ + +++ G ++ A+ YG +G+AFQ++DD+LD V MGK +G+D Sbjct: 202 GKLITCAVRMGAILGGADDAQLDAITRYGDAIGLAFQVMDDILDCTSTVEAMGKGVGKDA 261 Query: 230 RNGKPTLPVILAFQ 243 K T P +L Q Sbjct: 262 GRDKLTYPGLLGLQ 275 >gi|91974793|ref|YP_567452.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5] gi|91681249|gb|ABE37551.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5] Length = 321 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 27/269 (10%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPD----------VVKYLIFSGGKRLRPMLTLATAL 55 D T +D E +L R+ SD +++PD ++Y GGKRLRP L + +A Sbjct: 28 DTTAEDTEA----LLGRLLSD-DLLPDEITRPRRLMEAIRYATLGGGKRLRPFLAVESAA 82 Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFL 113 + + +L+ A+E IH +L+HDD+ +D+S LRRG+ + + T++L GD L Sbjct: 83 VFGVERASALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAGDAL 142 Query: 114 LSQAFCMV----IETKSQEALEALSLVA-CT----LAEGELRQLSLSKNLDVTEE-DYLH 163 L+ AF ++ + Q L+ ++A C + G++ L+ E D Sbjct: 143 LTFAFDIITRDEVHRDPQVRLDLNRVLARCAGLGGMVGGQILDLAGEGRFGDREPVDVAR 202 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 + + KT L +++ +AL YG LG AFQ+ DD+LD G+ +GK Sbjct: 203 LQQMKTGALLRYGCVAGAILGEAPPEHYRALDDYGRALGEAFQIADDLLDVEGDAAALGK 262 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNF 252 G D GK T L +R ++ Sbjct: 263 PAGADAALGKTTFVTQLGIDGAKQRVRDL 291 >gi|163845354|ref|YP_001623009.1| hypothetical protein BSUIS_B1253 [Brucella suis ATCC 23445] gi|163676077|gb|ABY40187.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 304 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 12/215 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L L +A + G + +A A+E IH +L+HDD+ L Sbjct: 45 AMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDL 104 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV-ACTLAEGELRQL 148 RRG+ + ++L GD LL+ AF ++ +++ +A + LV A T A G L + Sbjct: 105 RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIASDETELDATTRIKLVCALTRASG-LGGM 163 Query: 149 SLSKNLDVTEE----DYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ E D +I KT L A E ++IAG R+ + +G + Sbjct: 164 AGGQALDLMAETRKPDEAGIITLQAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAI 223 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + MGK G+D GK TL Sbjct: 224 GLAFQLADDLLDVTADAGTMGKATGKDAAAGKATL 258 >gi|227513485|ref|ZP_03943534.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577] gi|227524627|ref|ZP_03954676.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290] gi|227083358|gb|EEI18670.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577] gi|227088111|gb|EEI23423.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290] Length = 307 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 12/223 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA-CAIEFIHTATLLHDD 83 +D + + + + Y + +GGKRLRP+LT+AT + + +L A CA+E +H+ +L+HDD Sbjct: 31 TDQQKLFESMSYSVNAGGKRLRPLLTIATLITFNQAITDSILKATCALELLHSYSLIHDD 90 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ LRRGK ++G + L GD L + AF V++ +A A Sbjct: 91 LPAMDNDGLRRGKPTNHTIYGAGMATLAGDGLQALAFQWVVDNDLTADTRCQLALALAKA 150 Query: 142 EGELRQLSLSKNLDVTEEDY---LHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G R ++ + D+ E LH + ++KT L S A+ ++A V ++ L Sbjct: 151 AGP-RGMASGQADDIEFEGTRLKLHELQKLDRNKTGALISYAVNAGLIMAQVPKDQKKDL 209 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF-RNGKPTL 236 ++ N G AFQ+ DD+LD G+ +GK + +D +N P L Sbjct: 210 LAFANNFGAAFQIYDDILDIVGDEKAIGKPVHQDADKNTYPNL 252 >gi|144900826|emb|CAM77690.1| geranyltranstransferase [Magnetospirillum gryphiswaldense MSR-1] Length = 296 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 18/230 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + D ++Y GGKRLRP LT+ A + + + CA+E +H +L+HDD+ Sbjct: 34 VHDAMRYSALDGGKRLRPFLTVQAASLFNVSPAAALRVGCALEMVHCYSLIHDDLPCMDD 93 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL------- 140 LRRG+ + T++L GD L S+AF E + E+ V C L Sbjct: 94 DDLRRGRPTCHRQFDEATALLAGDALQSRAF----EVLAAESTHPDPAVRCELVWQLAHA 149 Query: 141 AEGELRQLSLSKNLDVTE-----EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A G +L + D + + KT L A E +++ +S+R ALK Sbjct: 150 AGGMGMVGGQMVDLQAAQLTMDMADITRLQQMKTGRLIGFACEAGAILGKAPSSLRLALK 209 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 +Y +LG+AFQ+ DD+LD +G+ ++GK +G+D GK T +L + Sbjct: 210 NYAHDLGLAFQIADDLLDVQGDEMQVGKKLGKDADAGKATFVSLLGVEHA 259 >gi|17986554|ref|NP_539188.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] gi|62290646|ref|YP_222439.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941] gi|82700560|ref|YP_415134.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225628336|ref|ZP_03786370.1| geranyltranstransferase [Brucella ceti str. Cudo] gi|225853224|ref|YP_002733457.1| polyprenyl synthetase [Brucella melitensis ATCC 23457] gi|237816147|ref|ZP_04595142.1| geranyltranstransferase [Brucella abortus str. 2308 A] gi|254689934|ref|ZP_05153188.1| geranyltranstransferase [Brucella abortus bv. 6 str. 870] gi|254694426|ref|ZP_05156254.1| geranyltranstransferase [Brucella abortus bv. 3 str. Tulya] gi|254698085|ref|ZP_05159913.1| geranyltranstransferase [Brucella abortus bv. 2 str. 86/8/59] gi|254708366|ref|ZP_05170194.1| geranyltranstransferase [Brucella pinnipedialis M163/99/10] gi|254708781|ref|ZP_05170592.1| geranyltranstransferase [Brucella pinnipedialis B2/94] gi|254714624|ref|ZP_05176435.1| geranyltranstransferase [Brucella ceti M644/93/1] gi|254717522|ref|ZP_05179333.1| geranyltranstransferase [Brucella ceti M13/05/1] gi|254730969|ref|ZP_05189547.1| geranyltranstransferase [Brucella abortus bv. 4 str. 292] gi|256030307|ref|ZP_05443921.1| geranyltranstransferase [Brucella pinnipedialis M292/94/1] gi|256045376|ref|ZP_05448270.1| geranyltranstransferase [Brucella melitensis bv. 1 str. Rev.1] gi|256061806|ref|ZP_05451941.1| geranyltranstransferase [Brucella neotomae 5K33] gi|256160480|ref|ZP_05458169.1| geranyltranstransferase [Brucella ceti M490/95/1] gi|256255686|ref|ZP_05461222.1| geranyltranstransferase [Brucella ceti B1/94] gi|256258189|ref|ZP_05463725.1| geranyltranstransferase [Brucella abortus bv. 9 str. C68] gi|256263286|ref|ZP_05465818.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|256370183|ref|YP_003107694.1| geranyltranstransferase [Brucella microti CCM 4915] gi|260167981|ref|ZP_05754792.1| geranyltranstransferase [Brucella sp. F5/99] gi|260547118|ref|ZP_05822856.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260565731|ref|ZP_05836214.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260755469|ref|ZP_05867817.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260758692|ref|ZP_05871040.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260762526|ref|ZP_05874863.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260884489|ref|ZP_05896103.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|261214740|ref|ZP_05929021.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|261219357|ref|ZP_05933638.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261222894|ref|ZP_05937175.1| polyprenyl synthetase [Brucella ceti B1/94] gi|261315865|ref|ZP_05955062.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261316274|ref|ZP_05955471.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261322419|ref|ZP_05961616.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261325809|ref|ZP_05965006.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261757424|ref|ZP_06001133.1| polyprenyl synthetase [Brucella sp. F5/99] gi|265987340|ref|ZP_06099897.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|265991805|ref|ZP_06104362.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265998853|ref|ZP_06111410.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|294851019|ref|ZP_06791695.1| geranyltranstransferase [Brucella sp. NVSL 07-0026] gi|297249039|ref|ZP_06932747.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196] gi|17982161|gb|AAL51452.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] gi|62196778|gb|AAX75078.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941] gi|82616661|emb|CAJ11743.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225616182|gb|EEH13230.1| geranyltranstransferase [Brucella ceti str. Cudo] gi|225641589|gb|ACO01503.1| Polyprenyl synthetase [Brucella melitensis ATCC 23457] gi|237788609|gb|EEP62822.1| geranyltranstransferase [Brucella abortus str. 2308 A] gi|256000346|gb|ACU48745.1| geranyltranstransferase [Brucella microti CCM 4915] gi|260095483|gb|EEW79361.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260151104|gb|EEW86199.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260669010|gb|EEX55950.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260672952|gb|EEX59773.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260675577|gb|EEX62398.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260874017|gb|EEX81086.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|260916347|gb|EEX83208.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|260921478|gb|EEX88131.1| polyprenyl synthetase [Brucella ceti B1/94] gi|260924446|gb|EEX91014.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261295109|gb|EEX98605.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261295497|gb|EEX98993.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261301789|gb|EEY05286.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261304891|gb|EEY08388.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261737408|gb|EEY25404.1| polyprenyl synthetase [Brucella sp. F5/99] gi|262553542|gb|EEZ09311.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|263002761|gb|EEZ15164.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263093252|gb|EEZ17349.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|264659537|gb|EEZ29798.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|294821662|gb|EFG38658.1| geranyltranstransferase [Brucella sp. NVSL 07-0026] gi|297174172|gb|EFH33529.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196] gi|326409783|gb|ADZ66848.1| polyprenyl synthetase [Brucella melitensis M28] gi|326539499|gb|ADZ87714.1| polyprenyl synthetase [Brucella melitensis M5-90] Length = 304 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 12/215 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L L +A + G + +A A+E IH +L+HDD+ L Sbjct: 45 AMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDL 104 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV-ACTLAEGELRQL 148 RRG+ + ++L GD LL+ AF ++ +++ +A + LV A T A G L + Sbjct: 105 RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIASDETELDATTRIKLVCALTRASG-LGGM 163 Query: 149 SLSKNLDVTEE----DYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ E D +I KT L A E ++IAG R+ + +G + Sbjct: 164 AGGQALDLMAETRKPDEAGIITLQAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAI 223 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + MGK G+D GK TL Sbjct: 224 GLAFQLADDLLDVTADAGTMGKATGKDAAAGKATL 258 >gi|189024858|ref|YP_001935626.1| polyprenyl synthetase [Brucella abortus S19] gi|189020430|gb|ACD73152.1| Polyprenyl synthetase [Brucella abortus S19] Length = 288 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 12/215 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L L +A + G + +A A+E IH +L+HDD+ L Sbjct: 29 AMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDL 88 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV-ACTLAEGELRQL 148 RRG+ + ++L GD LL+ AF ++ +++ +A + LV A T A G L + Sbjct: 89 RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIASDETELDATTRIKLVCALTRASG-LGGM 147 Query: 149 SLSKNLDVTEE----DYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ E D +I KT L A E ++IAG R+ + +G + Sbjct: 148 AGGQALDLMAETRKPDEAGIITLQAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAI 207 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + MGK G+D GK TL Sbjct: 208 GLAFQLADDLLDVTADAGTMGKATGKDAAAGKATL 242 >gi|153830561|ref|ZP_01983228.1| geranyltranstransferase [Vibrio cholerae 623-39] gi|148873959|gb|EDL72094.1| geranyltranstransferase [Vibrio cholerae 623-39] Length = 294 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 12/241 (4%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L RI + + ++Y + GGKR RP L T ML + A A+E IH +L Sbjct: 20 LNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSL 79 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 80 IHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGALSAAGETQRVAM 139 Query: 138 C-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN 188 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG + Sbjct: 140 IQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKG 199 Query: 189 -SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ L Y +G+AFQ+ DD+LD + +GK G D K T P +L + + Sbjct: 200 RAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLKGAQQ 259 Query: 248 R 248 + Sbjct: 260 K 260 >gi|116333612|ref|YP_795139.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC 367] gi|116098959|gb|ABJ64108.1| farnesyl-diphosphate synthase [Lactobacillus brevis ATCC 367] Length = 300 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 118/248 (47%), Gaps = 18/248 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDS 88 + Y + +GGKRLRP+LT+AT +L + + + H A+E +HT +L+HDD+ +D+ Sbjct: 38 AMTYSVLAGGKRLRPLLTVATMRSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDND 97 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 ALRRG+ + +G + L GD LL+ AF + T ++A + A A G + Sbjct: 98 ALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMV 157 Query: 149 --------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 S NL +++ LH K KT L A++ ++ + A + Sbjct: 158 AGQAKDIQSEHVNLPLSQLRVLH--KEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADA 215 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 G+AFQ+ DD+LD EMGK +D K T P L G TI+ G Sbjct: 216 FGLAFQIYDDILDVVSSPAEMGKATQKDADEAKNTYPGKL----GLIGANQALIDTIHSG 271 Query: 261 KISVENLK 268 + +++ L Sbjct: 272 QAALQGLP 279 >gi|254700427|ref|ZP_05162255.1| geranyltranstransferase [Brucella suis bv. 5 str. 513] gi|261750926|ref|ZP_05994635.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] gi|261740679|gb|EEY28605.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] Length = 304 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 12/215 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L L +A + G + +A A+E IH +L+HDD+ L Sbjct: 45 AMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDL 104 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV-ACTLAEGELRQL 148 RRG+ + ++L GD LL+ AF ++ +++ +A + LV A T A G L + Sbjct: 105 RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIASDETELDATTRIKLVCALTRASG-LGGM 163 Query: 149 SLSKNLDVTEE----DYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ E D +I KT L A E ++IAG R+ + +G + Sbjct: 164 AGGQALDLMAETRKPDEAGIITLQAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAI 223 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + MGK G+D GK TL Sbjct: 224 GLAFQLADDLLDVTADAGTMGKATGKDAAAGKATL 258 >gi|332981368|ref|YP_004462809.1| polyprenyl synthetase [Mahella australiensis 50-1 BON] gi|332699046|gb|AEE95987.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON] Length = 282 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/254 (33%), Positives = 133/254 (52%), Gaps = 24/254 (9%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I + ++Y +FSGGKRLRP+L ++ + + D+ + LACAIEFIHT +L+HDD+ Sbjct: 31 VIHEAMRYSVFSGGKRLRPVLLISAYELFDEHVDDCMPLACAIEFIHTYSLIHDDLPAMD 90 Query: 89 AL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-- 144 RRGK V+G +VL GD LL+ AF ++++ ++ + +A A G Sbjct: 91 DDDTRRGKATCHKVFGEGIAVLTGDALLNHAFEVMLDDIARNPHHIAAAIAIAKAAGIGG 150 Query: 145 ------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + L +K +D Y+H + KTA L AA++ +L AG +A++ YG Sbjct: 151 MIGGQVMDLLYENKPVDDGVLQYIH--QHKTAALICAAVKAGALAAGADEVYVRAIEQYG 208 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + LG+AFQ+ DD+LD V+E GK K T P + + K + F + I+ Sbjct: 209 LALGMAFQISDDILD----VDEGGK------EEVKATYPALYGIEASIKAAQEFTQHAID 258 Query: 259 DGKISVENLKKAFI 272 I+V K F+ Sbjct: 259 --AIAVFGQKGTFL 270 >gi|239637669|ref|ZP_04678641.1| geranyltranstransferase [Staphylococcus warneri L37603] gi|239596887|gb|EEQ79412.1| geranyltranstransferase [Staphylococcus warneri L37603] Length = 292 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/231 (32%), Positives = 123/231 (53%), Gaps = 14/231 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T ML + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 35 YSLNAGGKRIRPVLLLLTLDMLNEDYRQGMQSALALEMIHTYSLIHDDLPAMDNDDYRRG 94 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVACTLA--EGE- 144 K+ V+G ++L GD LL++AF +V + K + L+ L+ + L G+ Sbjct: 95 KLTNHKVYGEWKAILAGDALLTKAFELVSYDSALCDAKKVKVLQRLAYASGHLGMVGGQT 154 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L S K +D++ + +H ++KT L + A+ + IA L + +LG+ Sbjct: 155 LDMQSEDKKIDISTLESIH--RTKTGALLTFAIMSAVDIADTDEHTSAMLNEFSDHLGLM 212 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 FQ+ DD+LD G+ ++GK +G D N K T IL + G + + N+ ++ Sbjct: 213 FQIKDDLLDIYGDEQKLGKKVGSDLENDKSTYVSILN-KDGAENKLNYHRN 262 >gi|256114345|ref|ZP_05455078.1| Polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|265995644|ref|ZP_06108201.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|262766928|gb|EEZ12546.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] Length = 304 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 12/215 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L L +A + G + +A A+E IH +L+HDD+ L Sbjct: 45 AMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDL 104 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV-ACTLAEGELRQL 148 RRG+ + ++L GD LL+ AF ++ +++ +A + LV A T A G L + Sbjct: 105 RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIASDETELDATTRIKLVCALTRASG-LGGM 163 Query: 149 SLSKNLDVTEE----DYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ E D +I KT L A E ++IAG R+ + +G + Sbjct: 164 AGGQALDLMAETRKPDEAGIITLQAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAI 223 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + MGK G+D GK TL Sbjct: 224 GLAFQLADDLLDVTADAGTMGKATGKDAAAGKATL 258 >gi|325694101|gb|EGD36019.1| geranyltranstransferase [Streptococcus sanguinis SK150] Length = 291 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 80/261 (30%), Positives = 129/261 (49%), Gaps = 19/261 (7%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS---GGKRLRPMLTLA--TALMLEYRGDNHVL 66 +EK+ L ++ ++ PD+ + +++S GGKR+RP+L L A LE + H Sbjct: 7 LEKIG-LTIEDFYKSQQVSPDLTEVILYSVKAGGKRIRPLLLLGLIQAFGLELT-EAHYQ 64 Query: 67 LACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-- 122 +A A+E IHT +L+HDD+ RRG++ + +G ++L GD L + ++ Sbjct: 65 VAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARA 124 Query: 123 ETKSQ---EALEALSLVACTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALE 178 E SQ + + LSL A + + L + V ED + +KT L + Sbjct: 125 ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQVIRLEDLKTIHANKTGKLLTYPFV 184 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + LIA V+ SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T P Sbjct: 185 AAGLIAEVEQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAADKSTYPA 244 Query: 239 ILAFQRGTKREKNFWKSTIND 259 L G KNF+ T+++ Sbjct: 245 FL----GLDGAKNFFNQTLDE 261 >gi|125717531|ref|YP_001034664.1| farnesyl diphosphate synthase [Streptococcus sanguinis SK36] gi|125497448|gb|ABN44114.1| Farnesyl diphosphate synthase, putative [Streptococcus sanguinis SK36] Length = 291 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 83/271 (30%), Positives = 131/271 (48%), Gaps = 39/271 (14%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNH 64 LT++D K +++ SD + +V+ Y + +GGKR+RP+L L A LE + H Sbjct: 12 LTIEDFYKS-----QQVSSD---LAEVILYSVQAGGKRIRPLLLLELIQAFGLEL-AEAH 62 Query: 65 VLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +A A+E IHT +L+HDD+ RRG++ + +G ++L GD L + ++ Sbjct: 63 YQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLA 122 Query: 123 --ETKSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSK 168 E SQ + + LSL A + +GE + +SL ED + +K Sbjct: 123 RAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISL--------EDLKIIHANK 174 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 T L + + LI Q SV+ L+ G LG+AFQ+ DD+LD E+GK +D Sbjct: 175 TGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKD 234 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 K T P L G KNF+ T+++ Sbjct: 235 LAAAKSTYPAFL----GLDGAKNFFNQTLDE 261 >gi|295695407|ref|YP_003588645.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912] gi|295411009|gb|ADG05501.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912] Length = 295 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 116/240 (48%), Gaps = 18/240 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL- 90 + ++Y +F+GGKRLRP+L +A + ACA+E +HT +L+HDD+ Sbjct: 35 EAMRYSLFAGGKRLRPLLAMAACEGAGGSLREALPAACALELVHTYSLIHDDLPAMDDDD 94 Query: 91 -RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG+ V+G +VL GD LL+ AF V+ A + LV LAE + Sbjct: 95 YRRGRPTNHRVFGEAMAVLAGDALLTLAFG-VLAKAPLPATTRIRLVD-ELAEASGKDGM 152 Query: 150 LSK---NLDVTEEDY---------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + +++ T D LH + KT L A+L + L AG S+ L +Y Sbjct: 153 VGGQALDIEATGADGQPDPELLRDLH--RKKTGALIIASLRMGGLCAGADESLLDRLSAY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G +G+A+Q+VDD+LD G+ +GK +G D K T P + R + + K I Sbjct: 211 GQAVGLAYQIVDDLLDVGGDARRIGKAVGRDAALNKLTWPGVYGVDRSREDVRRLTKEAI 270 >gi|238760656|ref|ZP_04621781.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236] gi|238701121|gb|EEP93713.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236] Length = 306 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 85/277 (30%), Positives = 128/277 (46%), Gaps = 42/277 (15%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M N A AIE IH +L+HDD+ Sbjct: 41 EAMRYGAVLGGKRLRPYLVYATGQMFGLSPTNLDAPAAAIECIHAYSLIHDDLPAMDDDD 100 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLA------ 141 LRRG+ + +G ++L GD L + AF ++ + + + LS++A LA Sbjct: 101 LRRGQPTCHVKFGEANAILAGDALQTLAFSILAQAPMPDVADKDRLSMIA-ELAHASGVA 159 Query: 142 ----------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 E E RQ+SL ED + + KT L AA+ + + AG Q R Sbjct: 160 GMCGGQALDLEAEARQISL--------EDLERIHRHKTGALIRAAVRLGAFAAGEQG--R 209 Query: 192 QALK---SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +AL Y +G+AFQ+ DD+LD G+ +GK G D + GK T P +L + Sbjct: 210 KALTLLDRYSEAIGLAFQVQDDILDVIGDTATIGKRQGSDQQLGKSTYPALLGLDCAKTK 269 Query: 249 EKNFWKSTIND-GKISVENLKKA-------FIIMREN 277 ++ ++ I +S ++ A FII R+N Sbjct: 270 ARDLYQEAICALNALSEQSYNTAPLQALACFIIERDN 306 >gi|292898693|ref|YP_003538062.1| geranyltranstransferase [Erwinia amylovora ATCC 49946] gi|291198541|emb|CBJ45649.1| geranyltranstransferase [Erwinia amylovora ATCC 49946] gi|312171554|emb|CBX79812.1| geranyltranstransferase [Erwinia amylovora ATCC BAA-2158] Length = 299 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 16/225 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L AT ML A AIE IH +L+HDD+ +D+ + Sbjct: 34 NAMEYGALLGGKRLRPFLVYATGDMLRADDAALDAPAAAIECIHAYSLIHDDLPAMDNDS 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLVA-----CT 139 LRRG+ + +G ++++L GD L + AF ++ + ++ + LS +A Sbjct: 94 LRRGQPTCHIKFGEESAILAGDALQTLAFSILADAPMPGVMAESRIAMLSELAQASGVAG 153 Query: 140 LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSY 197 + G+ L+ K + + E + +H + KT L +A+ + +L AG + AL + Sbjct: 154 MCGGQALDLAAEGKKVTLNELEQIH--RHKTGALIRSAVRLGALTAGESGRAALPALDRF 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD G+ +GK G D + GK T P ++ Sbjct: 212 ANAIGLAFQVQDDILDVTGDTEVLGKQQGADQQLGKSTYPALMGL 256 >gi|283834262|ref|ZP_06354003.1| geranyltranstransferase [Citrobacter youngae ATCC 29220] gi|291069784|gb|EFE07893.1| geranyltranstransferase [Citrobacter youngae ATCC 29220] Length = 299 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 80/263 (30%), Positives = 121/263 (46%), Gaps = 16/263 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ +D+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGQMFGVSLSTLDAPAAAVECIHAYSLMHDDLPAMDNDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--------LEALSLVACTLA 141 LRRG + +G ++L GD L + AF ++ + E L L+ + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSIISDAPMPEVADRDRIAMLSELAQASGIAG 153 Query: 142 EGELRQLSLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQA-LKSYGM 199 + L L E D L I + KT L AA+ + +L AG + A L Y Sbjct: 154 MCGGQALDLEAEGHQVELDALERIHRHKTGALIRAAVRLGALSAGDKGRECLAILDKYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L G ++ +N + I D Sbjct: 214 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQARNKARDLIED 269 Query: 260 GKISVENLKKAFIIMRENRALVD 282 + S+ L + AL D Sbjct: 270 ARQSLSLLAAQSLDTSALEALAD 292 >gi|311030982|ref|ZP_07709072.1| Polyprenyl synthetase [Bacillus sp. m3-13] Length = 298 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 27/240 (11%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ + + Y + +GGKRLRP+L LAT + + +ACA+E IHT +L+HDD+ Sbjct: 33 EVLLESMNYSLKAGGKRLRPLLVLATLKSFGKPEELGMPVACAVEMIHTYSLVHDDLPSM 92 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF------------CMVIETKSQEALEA- 132 RRGK V+G ++L GD LL+ +F M + T +E +A Sbjct: 93 DDDDFRRGKPTNHKVFGEAMAILAGDALLTHSFEVMEDLLNFDVKPMKVVTLMKELAKAA 152 Query: 133 --LSLVACTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 +V +A EGE QLSL + +Y+H ++KT L ++ +++ Sbjct: 153 GPTGMVGGQVADMEGEGAQLSLQ------DLEYIH--RNKTGKLLGFSIVAGAILGDATE 204 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 L+ + +LG+AFQ+ DD+LD G+ ++GK +G D N K T P +L+ ++ Sbjct: 205 EQISKLEQFADHLGLAFQIRDDILDIEGDAAKIGKPVGSDTLNEKVTYPSLLSMNGAKEK 264 >gi|170781757|ref|YP_001710089.1| putative polyprenyl synthetase [Clavibacter michiganensis subsp. sepedonicus] gi|169156325|emb|CAQ01473.1| putative polyprenyl synthetase [Clavibacter michiganensis subsp. sepedonicus] Length = 373 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 104/348 (29%), Positives = 161/348 (46%), Gaps = 55/348 (15%) Query: 28 EMIPDVVKYLIFS-----GGKRLRP---------MLTLATALMLEYRGDNH------VLL 67 E+ PD+V FS GGKR R ++ L + +G+ V + Sbjct: 28 EISPDLVPIQEFSSDLLRGGKRFRAQFCYWGWRSVIDLEPSPAGRPQGEERPGYRAVVGV 87 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARL---------VWGNQTS-------VLVGD 111 A +E H A L+HDD++D S RRG+ AA WG ++ L+GD Sbjct: 88 AAGLEIFHAAALIHDDIIDRSDTRRGRPAAHRRFEALHAASGWGGSSAGFGEAGATLLGD 147 Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAE-GELR-QLSLSKNLDVTEE---------D 160 LL + ++I+ S AL S T AE +R Q++L + LDV EE D Sbjct: 148 LLLGWSDELLID--SLLALADGSAARATRAELATMRTQVTLGQYLDVLEEVAWPTVPEDD 205 Query: 161 YL----HVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 L +VI K+A A L V + +AG AL++ G+ LGIAFQL DDVL Sbjct: 206 TLARAHNVIVYKSAKYSIEAPLVVGASLAGATPEQVAALRAVGLPLGIAFQLRDDVLGVF 265 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 G+ GK G+D R GK T+ + LA +R + + + D + E ++ ++R Sbjct: 266 GDSAVTGKPSGDDLREGKRTVLIALARRRLPDGVRRTVDALLGDADLDDEQIRALQSVLR 325 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME-VVDFCLQRLN 322 E+ AL + E Y +++ +LR P + ++ +E +VD +R+ Sbjct: 326 ESGALDEVEGMIARYVRESLAALRDAPIGARARNQLELLVDSVTRRVT 373 >gi|262402761|ref|ZP_06079322.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] gi|262351543|gb|EEZ00676.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] Length = 294 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/236 (31%), Positives = 115/236 (48%), Gaps = 12/236 (5%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L RI + + ++Y + GGKR RP L T ML + A A+E IH +L Sbjct: 20 LNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELNELDTPASAVECIHAYSL 79 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 80 IHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDALQTLAFTILAEGALSAAGETQRVAM 139 Query: 138 C-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN 188 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG + Sbjct: 140 IQALAEASGAQGMCLGQALDLAAENRLVSLEELETIHRNKTGALMRCAIRLGALAAGEKG 199 Query: 189 -SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ L Y +G+AFQ+ DD+LD + +GK G D + K T P +L + Sbjct: 200 RAMLPHLDRYADAVGLAFQVQDDILDIISDTETLGKPQGSDQQLNKSTYPALLGLK 255 >gi|261212060|ref|ZP_05926346.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC341] gi|260838668|gb|EEX65319.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC341] Length = 294 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 118/243 (48%), Gaps = 12/243 (4%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L L RI + + ++Y + GGKR RP L T ML + A A+E IH Sbjct: 18 LWLNRIPFQSLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELNELDTPASAVECIHAY 77 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 +L+HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 78 SLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGALSAAGETQRV 137 Query: 136 VAC-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGV 186 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG Sbjct: 138 AMIQALAEASGAQGMCLGQALDLAAENRLVSLEELETIHRNKTGALMRCAIRLGALAAGE 197 Query: 187 QN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + ++ L Y +G+AFQ+ DD+LD + +GK G D + K T P +L + Sbjct: 198 KGRAMLPHLDRYADAVGLAFQVQDDILDIISDTETLGKPQGSDQQLNKSTYPALLGLKGA 257 Query: 246 TKR 248 ++ Sbjct: 258 QEK 260 >gi|48477920|ref|YP_023626.1| geranylgeranyl pyrophosphate synthase [Picrophilus torridus DSM 9790] gi|48430568|gb|AAT43433.1| geranylgeranyl pyrophosphate synthase [Picrophilus torridus DSM 9790] Length = 345 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 95/341 (27%), Positives = 159/341 (46%), Gaps = 50/341 (14%) Query: 16 NFLILKRICSDVEMIPDVVKYLI---FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 NF K D E I V+K L+ +GGKRLRP++ + + DN + + +IE Sbjct: 21 NFFEKKLDACDDENIRYVIKELMEFTMNGGKRLRPIMMITGYSLFNDIDDNIIKASISIE 80 Query: 73 FIHTATLLHDDVVDDSALRRGK------VAARLVWGNQT---SVLVGDFLLSQAFCMVIE 123 + L+HDD++D S +RRG+ V RL + +++ GD +I+ Sbjct: 81 LAQSYLLIHDDIMDQSDMRRGRPSFHRSVETRLNDPRNSMNIAIVAGD---------LID 131 Query: 124 TKSQEAL--------------EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169 + S EAL S V +G+L + S + + +E + + KT Sbjct: 132 SFSHEALLTSGFDIKNLISADYEFSKVIEDTGKGQLIDIFSSLDDEFSESRLMKLHYMKT 191 Query: 170 A-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 A L + +++AG + + L+ YG N+GIAFQ+ DD+L G+ + GK+I D Sbjct: 192 ARYTIEGPLVMGAMLAGNKKDI-DYLRIYGKNIGIAFQIKDDILGLFGDEKQTGKSIKSD 250 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288 GK TL +I A++R +++ K+ ++ G IS + KK I +V T Y Sbjct: 251 VNEGKKTLLMIKAYERSNNMIRDYIKTCLSSGDISDIDFKKLKDI------VVSTGSYDY 304 Query: 289 SYG------QKAKDSLRCLPDSSWKKSLMEVV-DFCLQRLN 322 S K K +L+ + + K+++E + D+ L R N Sbjct: 305 SLKIMEDLISKGKSALKMVSGNEESKAMLEYLSDYILNRSN 345 >gi|319406284|emb|CBI79921.1| geranyltranstransferase [Bartonella sp. AR 15-3] Length = 300 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 12/223 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S E++ + ++Y + +GGKR RP L + +A + + ++ + + A+E +H +L+HDD+ Sbjct: 33 SRPEILINAMRYGVLNGGKRFRPFLVIQSAALFDIPPEHSLDIGVALECLHCYSLIHDDL 92 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-------CMVIETKSQEALEALSL 135 +D+ LRRGK + T++L G+ LL+ AF C + + AL+ Sbjct: 93 PALDNDTLRRGKPTVHTAFDEGTAILAGNALLTFAFEIIAHKACSFSSKTKIDLITALTQ 152 Query: 136 VAC--TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 A + G++ L K E + + + KTA L A + +++ ++ Sbjct: 153 AAGLGGMIGGQMLDLEAEKKPQ-NESATITLQQMKTAALIRFACQAGAIMGQASKTLTDK 211 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 L S+G +G+AFQL DD+LD +GK +G+D K TL Sbjct: 212 LASFGTQIGLAFQLTDDLLDLTSHTKILGKTVGKDQIANKATL 254 >gi|147920444|ref|YP_001218859.1| polyprenyl synthetase [uncultured methanogenic archaeon RC-I] gi|116077941|emb|CAL59658.1| polyprenyl synthetase [uncultured methanogenic archaeon RC-I] Length = 289 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 117/211 (55%), Gaps = 13/211 (6%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFS---GGKRLRPMLTLATALMLEYRG---DN 63 K+M +N I ++ + VE+ P++ + + S GKRLRP+ L +M E G + Sbjct: 8 KEMRAINEGI-DQLLAGVEL-PEIRQGMAHSLKTSGKRLRPLTLL---IMAELNGGTVEK 62 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A IE IHTA+L+ DD++D+ RRG++ + +G + + D+L+S+A M+ Sbjct: 63 ALNAALGIECIHTASLIQDDILDEGLKRRGELTSHEKFGIFIATVSADYLISRA-VMLYS 121 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +++EA + LAEGE+ + ++ E YL ++ KTA F++ E+ + I Sbjct: 122 GYDAKSIEAFGRMGLELAEGEVLDIKTRRS-KTDEAYYLECVRRKTATAFASCFEIGARI 180 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 AGV + + + G GIA+Q+VDD++++ Sbjct: 181 AGVSDDKAELCRKMGEEFGIAYQIVDDLIEF 211 >gi|293392228|ref|ZP_06636562.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952762|gb|EFE02881.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 296 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 14/263 (5%) Query: 13 EKVNFLILKR---ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +++N + K+ I S + + +KY + GGKR+RP L AT ML + A Sbjct: 13 QRINQFLAKQFAHIDSASAPLAEAMKYGLLLGGKRIRPFLVYATGKMLGADMAHLDYAAA 72 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IH +L+HDD+ +DD LRRG + + T++L GD L + AF ++ + Sbjct: 73 AIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTLAFEILTDIPHL 132 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVS 180 A + L L+ A ++ + L ++LD+ E + + +KT L +AAL++ Sbjct: 133 SAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKTGALLTAALKMG 192 Query: 181 SLIAG--VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + ++ Q L+ Y +G+AFQ+ DD+LD G+ +GK G D K T P Sbjct: 193 FICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSATLGKTTGSDLTADKSTYPK 252 Query: 239 ILAFQRGTKREKNFWKSTINDGK 261 +L + ++ ++ + + K Sbjct: 253 LLGLEGAKQKALELYERALTELK 275 >gi|15837263|ref|NP_297951.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella fastidiosa 9a5c] gi|9105539|gb|AAF83471.1|AE003910_7 geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella fastidiosa 9a5c] Length = 291 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 16/223 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + S GKR+RP+L A + + A A+E IH +L+HDD+ +DD L Sbjct: 34 AMRYTVLSRGKRIRPLLVYAAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------- 143 RRG+ + + T++L GD L + AF + + S +L L T A G Sbjct: 94 RRGRPTVHIAFDEATAILTGDALQTLAFECLADAPSDTSLRIAWLQTLTHAAGVAGMCGG 153 Query: 144 ---ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 ++ S+ L E +H +KS T L AA+ + +L +L ++ Sbjct: 154 QAIDIDATGQSQTLKALEA--MHALKSGT--LMRAAVRMGALAGDPSAEDLHSLDTFAAT 209 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+AFQ+ DD+LD ++GK G+D K T P +L+ + Sbjct: 210 LGLAFQVRDDILDIESSSEQLGKTAGKDAIQQKSTFPALLSVE 252 >gi|309792042|ref|ZP_07686518.1| Polyprenyl synthetase [Oscillochloris trichoides DG6] gi|308225935|gb|EFO79687.1| Polyprenyl synthetase [Oscillochloris trichoides DG6] Length = 347 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 14/216 (6%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GK +RP L L L + G + L LA I+ +H TL+HDD+ DDS +RRG+ Sbjct: 55 GKLIRPQLVL---LACQAAGGDPALAMPLAAGIQLLHDFTLIHDDIEDDSDMRRGRPTLW 111 Query: 99 LVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSL---VACTLAEGELRQLSL 150 +WG + GD + A + + ++ L L V + EG+ +S Sbjct: 112 HLWGLAQGINAGDGMFVIAHLAIHQLSDLGVPAERVLPILRRFDEVILHVCEGQFLDISF 171 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 NL ++ EDYL +I KTA+L + + +++AG + AL ++G +LG+AFQ+ DD Sbjct: 172 EGNLGISTEDYLAMIGRKTAILIDGSAALGAMVAGADAATVAALSTFGRSLGLAFQIEDD 231 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +L G GK D K +LP++ A + Sbjct: 232 ILGIWGAPELTGKPRAADLYRRKVSLPIVHALRHAA 267 >gi|299132868|ref|ZP_07026063.1| Polyprenyl synthetase [Afipia sp. 1NLS2] gi|298593005|gb|EFI53205.1| Polyprenyl synthetase [Afipia sp. 1NLS2] Length = 312 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 106/237 (44%), Gaps = 12/237 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y +GGKRLRP L +A+A M + +L A+E IH +L+HDD+ +D+S Sbjct: 50 EAMRYSSLNGGKRLRPFLAVASAAMFDVPRQGALLAGAALECIHCYSLIHDDLPSMDNSD 109 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG+ + + + T++L GD LL+ AF ++ + L+ LA Sbjct: 110 LRRGRPTSHKKFDDATAILAGDSLLTLAFDIITRDEVHRDPTVRLLLTRALARAAGIGGM 169 Query: 150 LSKNL----------DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + D D + + KT L +L+ AL +YG Sbjct: 170 AGGQIMDLAGEGRFGDKEPPDVAKLQQMKTGALLKYGCIAGALLGQASKEQYAALDAYGH 229 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 G AFQ+ DD+LD G+ +GK G+D GK T L +R ++ K Sbjct: 230 AFGEAFQIADDLLDVEGDAAALGKPAGQDAALGKTTFVTQLGLDGARRRLQDLLKQA 286 >gi|170719766|ref|YP_001747454.1| polyprenyl synthetase [Pseudomonas putida W619] gi|169757769|gb|ACA71085.1| Polyprenyl synthetase [Pseudomonas putida W619] Length = 295 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 114/232 (49%), Gaps = 16/232 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 ++E + ++Y + +GGKR+RP+L A L + ACA+E IH +L+HDD+ Sbjct: 27 ELERLYAAMRYSVMNGGKRVRPLLAYAACQALGAPAEQANGAACAVELIHAYSLVHDDLP 86 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV---ACTL 140 LRRG+ + ++L GD L S AF +++ + +A+ L A Sbjct: 87 AMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPRLSPQPDAIRLAMVQALAK 146 Query: 141 AEGELRQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVR 191 A G + S+ LD +++H + KT L A++ + +L +G + + Sbjct: 147 AAGPAGMVAGQAIDLGSVGVKLDQQALEFMH--RHKTGALIEASVRLGALASGRAEQAQL 204 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AL++Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 205 DALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|120555348|ref|YP_959699.1| polyprenyl synthetase [Marinobacter aquaeolei VT8] gi|120325197|gb|ABM19512.1| farnesyl-diphosphate synthase [Marinobacter aquaeolei VT8] Length = 298 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 16/229 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVV 85 E + + ++Y + GGKR+RP L +A A + + ACA+E IH +L+H + Sbjct: 34 ERLQETMRYSVLGGGKRVRPALCMAAARAMGSDESTALAPACALELIHAYSLVHDDLPAM 93 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 DD LRRG+ A + + +++L GD L + AF ++ + + + +++++ LA Sbjct: 94 DDDDLRRGRPTAHIAFDEASAILAGDALQTLAFALLSDAPALSDRQRVTMIS-ELARASG 152 Query: 146 RQ----------LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA-L 194 Q S+ + L V + + +H + KT L A++ + +L + + + L Sbjct: 153 HQGMVGGQAIDLESVGQQLSVAQLETMH--RHKTGALIEASVRLGALTSETVTECQLSNL 210 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 Y LG+AFQ+ DD+LD G+ +GK G D KPT P +L + Sbjct: 211 TDYASALGLAFQVQDDLLDIEGDTEVIGKRQGSDAARAKPTYPALLGIE 259 >gi|254285563|ref|ZP_04960527.1| geranyltranstransferase [Vibrio cholerae AM-19226] gi|150424425|gb|EDN16362.1| geranyltranstransferase [Vibrio cholerae AM-19226] Length = 294 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 12/241 (4%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L RI + + ++Y + GGKR RP L T ML + A A+E IH +L Sbjct: 20 LNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSL 79 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 80 IHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGALSAAGETQRVAM 139 Query: 138 C-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN 188 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG + Sbjct: 140 IQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKG 199 Query: 189 -SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ L Y +G+AFQ+ DD+LD + +GK G D K T P +L + + Sbjct: 200 RAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQGLNKSTYPALLGLEGAQQ 259 Query: 248 R 248 + Sbjct: 260 K 260 >gi|329895161|ref|ZP_08270845.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088] gi|328922475|gb|EGG29816.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088] Length = 298 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 25/268 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV---------LLACAIEFIH 75 S+V++ D V Y + GGKRLRP L + A L R D + L A AIE IH Sbjct: 27 SEVQLA-DAVAYSLKVGGKRLRPALVYSAAASL--RADLTLFPPNLTPLDLAAAAIESIH 83 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 T +L+HDD+ +D+ LRRG+ + T++LVGD L + AF ++ + + A + + Sbjct: 84 TYSLVHDDLPAMDNDDLRRGQPTVHRQYDEATAILVGDALQAWAFELLTQIDTLPADKVV 143 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEE------DYLHVIKS-KTAVLFSAALEVSSLIAGV 186 ++V + + L + LD+ DYL + S KT L +AL + + Sbjct: 144 AMVKELAQASGPKGMVLGQALDMQATGASESVDYLKQLHSLKTGALIRSALRLGAYCMNA 203 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + R+ L +YG +G+ FQ+VDD+LD + +GK G+D K T +L + G Sbjct: 204 GSKERRVLSAYGDAIGLCFQVVDDILDVTTDSATLGKTAGKDQEADKLTYVKLLGLE-GA 262 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIM 274 K E + K SV +L +++ Sbjct: 263 KAEAQHLCA---QAKASVADLPNPQVLV 287 >gi|229530007|ref|ZP_04419397.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] gi|229333781|gb|EEN99267.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] Length = 294 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/235 (31%), Positives = 113/235 (48%), Gaps = 12/235 (5%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L RI + + ++Y + GGKR RP L T ML + A A+E IH +L Sbjct: 20 LNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSL 79 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +DD LRRGK + + T++L GD L + AF ++ E A E + Sbjct: 80 IHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGALSAAGETQRVAM 139 Query: 138 C-TLAEGELRQ-LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN 188 LAE Q + L + LD+ E+ L + ++KT L A+ + +L AG + Sbjct: 140 IQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKG 199 Query: 189 -SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++ L Y +G+AFQ+ DD+LD + +GK G D K T P +L Sbjct: 200 RAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGL 254 >gi|167573592|ref|ZP_02366466.1| geranyltranstransferase [Burkholderia oklahomensis C6786] Length = 294 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 12/222 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKR+RP+L A + A A+E IH +L+HDD+ +DD A Sbjct: 34 EAMRYAALGGGKRVRPLLCHAAGELTGASEAALNAAAAALEMIHVYSLVHDDMPCMDDDA 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-----QEAL-EALSLVACTLAEG 143 LRRGK + + T++LVGD L SQAF + + + Q AL L+L + ++ Sbjct: 94 LRRGKPTVHVEYDEATALLVGDALQSQAFVALTDAAALPLDRQPALVRELALASGSIGMA 153 Query: 144 ELRQLSLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNS--VRQALKSYGMN 200 + + L+ D L + + KT L A++ + +L AG S +AL +Y Sbjct: 154 GGQAIDLASVGHALSRDALETMHRMKTGALLRASVRMGAL-AGETPSEDAMRALDAYAAA 212 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+VDD+LD + +GK G+D N KPT I+ Sbjct: 213 VGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGL 254 >gi|253990912|ref|YP_003042268.1| Geranyltranstransferase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782362|emb|CAQ85526.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP synthase [Photorhabdus asymbiotica] Length = 305 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 16/231 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKRLRP L A M +N A A+E IH +L+HDD+ +D+ LRRG+ Sbjct: 49 GGKRLRPFLVYAVGEMFGLSANNLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCH 108 Query: 99 LVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVACT-----LAEGELRQL 148 + +G ++L GD L + AF ++ + + LE L+ +A + G+ L Sbjct: 109 IKFGEAHAILAGDALQALAFEILSKREMPDVTTANRLEMLAELATASGIAGMCGGQSLDL 168 Query: 149 SL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ-NSVRQALKSYGMNLGIAFQ 206 K++D+ + +H + KT L A+++ + AG + V L Y +G+AFQ Sbjct: 169 EAEGKHIDLQALEQIH--RHKTGALIRCAVKMGAYGAGQSGHDVLPELDQYAQAIGLAFQ 226 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 + DD+LD G +GK G D + GK T P +L ++ ++ ++ + Sbjct: 227 VQDDILDVIGSTEMIGKRQGSDQQLGKSTYPALLGLEQAQQKAHELYQEAL 277 >gi|330830903|ref|YP_004393855.1| Geranyltranstransferase [Aeromonas veronii B565] gi|328806039|gb|AEB51238.1| Geranyltranstransferase [Aeromonas veronii B565] Length = 296 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 116/232 (50%), Gaps = 28/232 (12%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D + Y + GGKR+RP L A ML + + A A+E IH +LLHDD+ +D+ Sbjct: 34 DAMSYGLLLGGKRVRPFLVYAVGEMLGVKSELLDGPAAAVECIHAYSLLHDDLPAMDNDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL-VACTLA------- 141 LRRG+ + T++L GD L + AF ++ + ++L A + + TLA Sbjct: 94 LRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPMPDSLMANRVRMLSTLARASGYLG 153 Query: 142 ---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI-AGVQNSVR 191 + E RQ+SL+ E + +H + KT L A+ + +L A V ++ Sbjct: 154 MCGGQALDLQAEGRQISLA------ELEQVH--RHKTGALIECAVALGALCKADVDDATL 205 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AL++Y +G+AFQ+ DD+LD G+ +GK G D K T P +L + Sbjct: 206 AALQTYAAAIGLAFQVQDDILDITGDTATLGKPQGSDLALEKSTYPALLGLE 257 >gi|90415578|ref|ZP_01223512.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207] gi|90332901|gb|EAS48071.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207] Length = 295 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 121/252 (48%), Gaps = 16/252 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L E + ++Y +F+GGKRLRP L A A + N +A A+E IH + Sbjct: 22 MLPAATGPAEPLFAAMRYSVFNGGKRLRPALCFAAADAVAGSDANTAKVAAALEMIHAYS 81 Query: 79 LLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEAL 133 L+H +DD LRRGK + + T++L GD L S AF C + E +E + Sbjct: 82 LIHDDLPAMDDDDLRRGKPTCHIQFDEATAILAGDGLQSLAFQQLCELSELDPTIVVELV 141 Query: 134 S----LVACT-LAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQ 187 S L C+ + G+ + L+ V E D L V+ + KT L A++ + +L G Q Sbjct: 142 STLSRLGGCSGMVAGQ--AIDLAATGSVLELDALKVMHAHKTGALIEASVLMGALATG-Q 198 Query: 188 NSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 S Q ALK + +G+AFQ+ DD+LD ++GK G D N K T IL +R Sbjct: 199 ASQEQLGALKDFARAIGLAFQIQDDILDVESSTEQLGKQQGSDATNLKSTYTSILGLERA 258 Query: 246 TKREKNFWKSTI 257 + ++ Sbjct: 259 RSEAAKLFDQSM 270 >gi|84624779|ref|YP_452151.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188577762|ref|YP_001914691.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|84368719|dbj|BAE69877.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522214|gb|ACD60159.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 291 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 8/218 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +++ + GGKR+RP+L A+ + D A A+E IH +L+HDD+ +DD AL Sbjct: 34 AMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTLAEGEL 145 RRG+ + + T++L GD L ++AF ++ + +++L+ A Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTRAFELLAAASASAELRVGWMQSLATAAGAAGMCGG 153 Query: 146 RQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L + + +D + KT L A++ + +L G + +Q L + LG+A Sbjct: 154 QALDIDATGQLQPLQDLQRMHALKTGALIRASVHMGALTGGAATADQQRLDEFADALGLA 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 FQ+ DD+LD ++GK G+D K T P +L Sbjct: 214 FQVRDDILDVESSSAQLGKTAGKDAAQSKSTYPALLGM 251 >gi|218132228|ref|ZP_03461032.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC 43243] gi|217992887|gb|EEC58887.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC 43243] Length = 307 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 132/258 (51%), Gaps = 33/258 (12%) Query: 7 LTLKDM-----EKVNFLILKRICSDVEMIPDVVK---YLIFSGGKRLRPMLTLATALMLE 58 + KDM E +N +I + ++ M +V K Y + +GGKR+RP++ ++ A L Sbjct: 8 MQFKDMLNNKAEAINDIIKGFLPAEDTMSCEVEKAMNYSVMAGGKRIRPLI-MSEAYKLC 66 Query: 59 YRGDN------HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVG 110 + H +A A+EFIHT +L+HDD+ +D+ RRG++ +G +L G Sbjct: 67 GGSEECAAQVLHPFMA-ALEFIHTYSLVHDDLPAMDNDMYRRGQLTTHAAFGEDMGILAG 125 Query: 111 DFLLSQAF-------CMVIETKSQEALEALSLVAC-----TLAEGELRQLSLSK-NLDVT 157 D LL+ A+ C + +T + ++ A S++A + G+ + L+ ++ Sbjct: 126 DALLNYAYETMLRAACDMTDTYRERSIRAASVIAGKAGIYGMVGGQTLDVKLTGMPMNAG 185 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + DY + + KT L AA +++AG + V L+ G +G+AFQ+ DD+LD G+ Sbjct: 186 QLDY--IFRLKTGALIEAAFMAGAILAGAPDEVTAKLEKAGDLVGVAFQIQDDILDVTGD 243 Query: 218 VNEMGKNIGEDFRNGKPT 235 +GK + D +N K T Sbjct: 244 AEVIGKPVLSDEKNNKTT 261 >gi|262375796|ref|ZP_06069028.1| geranyltranstransferase [Acinetobacter lwoffii SH145] gi|262309399|gb|EEY90530.1| geranyltranstransferase [Acinetobacter lwoffii SH145] Length = 302 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 78/281 (27%), Positives = 140/281 (49%), Gaps = 26/281 (9%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEM--IPD----VVKYLIFSGGKRLRPMLTLATA 54 M + D++ + + I + + + +E IP+ V + + GGKR+RP L ATA Sbjct: 1 MSSITDVSTHALTQAQHRIQQDLLTALEAFAIPEPLRSAVHHAVMLGGKRVRPALCYATA 60 Query: 55 -LMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGD 111 L A AIEFIH +L HDD+ +D+ LRRG+ + +G T++L GD Sbjct: 61 ALKPNQNSAAVRRAAVAIEFIHCYSLAHDDLPCMDNDLLRRGQPTCHVAYGEDTALLAGD 120 Query: 112 FLLSQAFCMV-----IETKSQEA------LEALSLVACTLAEGELRQL-SLSKNLDVTEE 159 L S AF ++ + + EA ++ L+ + + G++ L S K +D Sbjct: 121 ILQSMAFEILGSRLFDQGPAVEASIVLKQMQILATASSKMVNGQVLDLQSEGKKIDQQAL 180 Query: 160 DYLHVIKSKTAVLFSAALEVS--SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + +H ++KT L SAA+ ++ ++ G ++ + L+ +G +G+AFQ+ DD+LD + Sbjct: 181 ETIH--RNKTGALISAAIMMAAVTIFDGTDLAIPK-LREFGQAIGLAFQVQDDILDIISD 237 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + +GK G+D + K T P ++ ++ + IN Sbjct: 238 TDVLGKTAGKDEQVEKSTYPALMGLEQAKAYAQQLHDQAIN 278 >gi|330812001|ref|YP_004356463.1| geranyltranstransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380109|gb|AEA71459.1| geranyltranstransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 295 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 16/225 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L A L + + ACA+E IH +L+HDD+ Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGQAEQANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACT----- 139 LRRG+ + ++L GD L S AF +++ +Q L+ +S +A Sbjct: 93 LRRGQPTTHKQFDEACAILAGDGLQSLAFTALLDPALSDCPAQVRLDMVSALALAAGPAG 152 Query: 140 LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 + G+ L S+ LD + +Y+H + KT L A++ + +L +G + QAL++Y Sbjct: 153 MVGGQAIDLGSVGLKLDQSALEYMH--RHKTGALIEASVRLGALASGRATPAQLQALQTY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD + +GK G D KPT P +L Sbjct: 211 ARAIGLAFQVQDDILDVESDTQTLGKRQGADIARDKPTYPALLGL 255 >gi|257875398|ref|ZP_05655051.1| geranyltranstransferase [Enterococcus casseliflavus EC20] gi|257809564|gb|EEV38384.1| geranyltranstransferase [Enterococcus casseliflavus EC20] Length = 295 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 125/242 (51%), Gaps = 14/242 (5%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA- 70 +E+V +K SD + + ++Y I +GGKR+RP+L +AT ++ N + CA Sbjct: 12 IEEVMERFVKEHTSDQRLF-ESMQYSIQAGGKRIRPLLLVATVAAF-HKPINTAVYQCAA 69 Query: 71 -IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETK 125 +E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ AF +V E + Sbjct: 70 ALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAMAEIE 129 Query: 126 SQEA---LEALSLVACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + L+ LS A T + G+ + +N + E+ + + + KT L A+ Sbjct: 130 ANQKVLLLQQLSKAAGTQGMVAGQAADIQ-GENQALRLEELMSIHERKTGELIRFAVIAG 188 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A V L + ++G+AFQ+ DD+LD E+GK + D K T P +L Sbjct: 189 GVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGKVVRRDDELAKSTYPALL 248 Query: 241 AF 242 Sbjct: 249 GL 250 >gi|325267227|ref|ZP_08133890.1| geranyltranstransferase [Kingella denitrificans ATCC 33394] gi|324981288|gb|EGC16937.1| geranyltranstransferase [Kingella denitrificans ATCC 33394] Length = 295 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 14/252 (5%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L +I + ++ + ++Y GGKRLRP+L A + + + A+E IH +L Sbjct: 23 LPQISQEPVVLHEAMRYSALDGGKRLRPLLVWAASQLGDSVQAACEAAMAAVECIHVYSL 82 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALS 134 +HDD+ +D+ LRRGK + +G+ ++L GD L + AF E ++ L+ + Sbjct: 83 VHDDMPEMDNDQLRRGKPTCHVQFGDAVALLTGDALQTLAFDILSAATELPAERQLKMVQ 142 Query: 135 LVA-----CTLAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++A +A G+ L+ + K++ + +H +K T L AA+++ L Sbjct: 143 VLAKASGSLGMAGGQAIDLANVGKDMKQPALEQMHGLK--TGALIRAAVQLGGLSCPQIT 200 Query: 189 SVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + A L +Y LG+AFQ++DDVLD + +GK G+D N KPT ++ Q K Sbjct: 201 ADQLARLDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNNKPTYVKLMGLQAARK 260 Query: 248 REKNFWKSTIND 259 + + + + Sbjct: 261 YAEQLVREAVTE 272 >gi|81428294|ref|YP_395294.1| farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei 23K] gi|78609936|emb|CAI54983.1| Farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei 23K] Length = 290 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 31/228 (13%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDV--VDD 87 + Y + +GGKRLRP+L A +LE G + A A+E IH+ +L+HDD+ +D+ Sbjct: 35 MTYSVMAGGKRLRPLLLFA---VLESTGQSIDETAFRAAGALELIHSYSLIHDDLPAMDN 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVACTLA---- 141 LRRG+ V+G ++L GD LL+ AF + +++ +E + L+A Sbjct: 92 DDLRRGQPTNHKVFGEAEAILAGDGLLTLAFEWLATLNVTAEQRIELVRLLAQAAGANGM 151 Query: 142 --------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 EGE + L+L++ V KT L A+ + +++A + A Sbjct: 152 VAGQIEDIEGEHKTLTLAQ--------LQQVHHLKTGCLIEVAVAMGAVLAQLGEVETTA 203 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L+ + G+AFQ+ DD+LD EMGK + +D K T P++L Sbjct: 204 LRGFAQQFGLAFQIQDDILDVTSTTAEMGKAVHKDAAEQKNTFPILLG 251 >gi|170747046|ref|YP_001753306.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] gi|170653568|gb|ACB22623.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] Length = 323 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 18/221 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + +++ + GGKRLRP L + TA ML + +E +H +L+HDD+ Sbjct: 59 EAMRHAVLGGGKRLRPFLAIETARMLGGSEAAALAAGAGVELVHCYSLVHDDLPAMDDDD 118 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE------- 142 +RRGK + T++LVGD L + AF +V + Q + + LA Sbjct: 119 MRRGKPTVHKAYDEATAILVGDALQTLAFEIVADPAWQPDARVRADLVLGLARASGLGGM 178 Query: 143 --GELRQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G+L L+ + N+DV +D L + KT + + ++E +++ G R AL Sbjct: 179 VGGQLLDLTAEGRFGAANMDV--DDTLRMQAMKTGAILAFSVEAGAIVGGADKDQRAALL 236 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 YG+ LG AFQ+ DD+LD MGK G+D GK TL Sbjct: 237 RYGLALGQAFQIADDILDREASPEAMGKATGKDKDAGKATL 277 >gi|292487451|ref|YP_003530323.1| geranyltranstransferase [Erwinia amylovora CFBP1430] gi|291552870|emb|CBA19915.1| geranyltranstransferase [Erwinia amylovora CFBP1430] Length = 264 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 115/223 (51%), Gaps = 16/223 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y GGKRLRP L AT ML A AIE IH +L+HDD+ +D+ +LR Sbjct: 1 MEYGALLGGKRLRPFLVYATGDMLRADDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLR 60 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLVA-----CTLA 141 RG+ + +G ++++L GD L + AF ++ + ++ + LS +A + Sbjct: 61 RGQPTCHIKFGEESAILAGDALQTLAFSILADAPMPGVMAESRIAMLSELAQASGVAGMC 120 Query: 142 EGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 G+ L+ K + + E + +H + KT L +A+ + +L AG + AL + Sbjct: 121 GGQALDLAAEGKKVTLNELEQIH--RHKTGALIRSAVRLGALTAGESGRAALPALDRFAN 178 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD G+ +GK G D + GK T P ++ Sbjct: 179 AIGLAFQVQDDILDVTGDTEVLGKQQGADQQLGKSTYPALMGL 221 >gi|291294415|ref|YP_003505813.1| Polyprenyl synthetase [Meiothermus ruber DSM 1279] gi|290469374|gb|ADD26793.1| Polyprenyl synthetase [Meiothermus ruber DSM 1279] Length = 336 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 8/216 (3%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK LR L + T L + + +A A+E L+HDD+ D S RRGK A + Sbjct: 47 GGKMLRGTLLVYTGLAYGASLEGVLPVAAALELFQNWALIHDDIEDASDERRGKPALHKL 106 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQLSL--SKNLDV 156 +G ++ GD L ++ + +++E + A LE + +V T A+G+ ++S + D+ Sbjct: 107 YGVPLALNAGDALHARQWALLVEAGASRAVLLEFVRMVEQT-AQGQHLEMSWMEGQRFDL 165 Query: 157 TEEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 E DYL ++ K A + A L + +L AG + G+ LGI FQ+VDDVL+ Sbjct: 166 GEPDYLEMVGQKAAYYTAVAPLRLGALAAGAEPPA--IFSEAGLKLGIGFQIVDDVLNLM 223 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 G+ + GK I D GK TL ++ Q+ + E+ Sbjct: 224 GDPAKYGKEIAGDLWEGKRTLILLRFLQQASPEERR 259 >gi|323448786|gb|EGB04680.1| hypothetical protein AURANDRAFT_55083 [Aureococcus anophagefferens] Length = 341 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 6/194 (3%) Query: 45 LRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 +R + L TA L +G +++ LA IE +HTA+L HDDV+D + RRG + + Sbjct: 141 IRATMVLLTARALRKQGSSNMRQRKLAEIIEIVHTASLFHDDVIDGADTRRGCPSVSAKF 200 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE--- 158 G++ ++L GDFLL++A + + ++ +E +S+V L GE+ Q+ T Sbjct: 201 GDKVAILAGDFLLARACVALAKLENLAVVELISVVIEHLVRGEIIQMRPESGTSDTHALL 260 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 E YL KT L + A ++L+ + A +YG ++G+AFQLVDD+LD+ Sbjct: 261 EAYLQKTFYKTGSLMANACRAAALLEDETQANCDAAFAYGRHVGLAFQLVDDILDFEASD 320 Query: 219 NEMGKNIGEDFRNG 232 E+GK D + G Sbjct: 321 LELGKPALADLQMG 334 >gi|291298290|ref|YP_003509568.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728] gi|290567510|gb|ADD40475.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728] Length = 346 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 3/204 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L L A + + A A+E +H +L+HDDV+D RR + A V+ Sbjct: 62 GKAIRPALVLLCARAVGSSDIEALPAAVAVELVHNFSLVHDDVIDRDVTRRHRPTAWSVF 121 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLSLSKNLDVTE 158 G+ ++L GD + + A ++ ++ A++ + LV + E G+ +S + Sbjct: 122 GDGAAILAGDAMSTLACAVLADSGHPAAMDGIKLVNRAIQELIDGQHADVSFETREQIDP 181 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 ++ + +KT L A + + G + L+++G +LG+AFQ VDD+L G+ Sbjct: 182 QECRAMAAAKTGALLGCACAIGARFGGGSPHQVERLRAFGTDLGLAFQHVDDLLGIWGDP 241 Query: 219 NEMGKNIGEDFRNGKPTLPVILAF 242 GK + D R+ K +LPV+ A Sbjct: 242 QATGKPVYSDLRSRKKSLPVVAAL 265 >gi|284051541|ref|ZP_06381751.1| Polyprenyl synthetase [Arthrospira platensis str. Paraca] Length = 239 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 11/189 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E I + ++Y + +GGKRLRP L LAT +L + + ACA+E IHT +L+HDD+ + Sbjct: 51 EKIYESMRYSLMAGGKRLRPTLCLATCELLGGTVEMAMPTACALEMIHTMSLIHDDLPAM 110 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLV-------- 136 D+ RRGK+ V+G+ ++L GD LLS AF V +T+ L ++ Sbjct: 111 DNDDYRRGKLTNHKVYGDDIAILAGDGLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVG 170 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 A L G++ ++ DV+EE + KT L A + +++AG + + L Sbjct: 171 ATGLVGGQVVDIASEGLSDVSEETLTFIHTHKTGALLEACVVCGAILAGANETDLERLSR 230 Query: 197 YGMNLGIAF 205 Y N+G+AF Sbjct: 231 YAKNIGLAF 239 >gi|148273051|ref|YP_001222612.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830981|emb|CAN01926.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 373 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 105/348 (30%), Positives = 160/348 (45%), Gaps = 55/348 (15%) Query: 28 EMIPDVVKYLIFS-----GGKRLRP---------MLTLATALMLEYRGDNH------VLL 67 E+ PD+V FS GGKR R ++ L + +G+ V + Sbjct: 28 EISPDLVPIQEFSSDLLRGGKRFRAQFCYWGWRSVIDLEPSPAGRPQGEERPGYRAVVGV 87 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARL---------VWGNQTS-------VLVGD 111 A +E H A L+HDD++D S RRG+ AA WG ++ L+GD Sbjct: 88 AAGLEIFHAAALVHDDIIDRSDTRRGRPAAHRRFEALHAASGWGGSSASFGEAGATLLGD 147 Query: 112 FLLSQAFCMVIETKSQEALEALSLVACTLAEGEL--RQLSLSKNLDV---------TEED 160 LL + ++I+ S AL S T AE + Q++L + LDV EED Sbjct: 148 LLLGWSDELLID--SLLALADGSAARATRAELAMMRTQVTLGQYLDVLEEVAWPTVPEED 205 Query: 161 YL----HVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 L +VI K+A A L V + +AG AL++ G+ LGIAFQL DDVL Sbjct: 206 TLARAHNVIVYKSAKYSIEAPLVVGANLAGATPEQVTALRAVGLPLGIAFQLRDDVLGVF 265 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 G+ GK G+D R GK T+ + LA +R + + + D + E ++ I+R Sbjct: 266 GDSAMTGKPSGDDLREGKRTVLIALARRRLPDGVRRTVDALLGDPDLDDEQIRVLQSILR 325 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME-VVDFCLQRLN 322 E+ AL + E + +++ +LR P S K+ +E +VD +R+ Sbjct: 326 ESAALDEVEGMIARHVRESLAALRDAPIGSRAKNQLELLVDSVTRRVT 373 >gi|119474634|ref|ZP_01614987.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143] gi|119450837|gb|EAW32070.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143] Length = 309 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 22/260 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDD 87 + Y + +GGKR+RP+L ATA + V +AC+IE IH +L+HDD+ Sbjct: 46 AMHYSLINGGKRIRPVLVYATAAAITTDVSPVVTANLDRIACSIEMIHAYSLIHDDLPAM 105 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACTLAEGE 144 LRRG+ + T++L GD L ++AF ++ E T+ + L T A G+ Sbjct: 106 DDDDLRRGQPTCHRAFDEATAILAGDALQARAFELLTELTECPPHIHLNLLRILTQASGQ 165 Query: 145 LRQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + S+ K +DV + + +H + KT L A++ + + + G + L Sbjct: 166 RGMVGGQLIDLESVDKPIDVQQLETIH--RLKTGALIRASIAMGATLTGADRQQLEQLDC 223 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 YG +G+AFQ+ DD+LD + +GK G D KPT P +L + + + Sbjct: 224 YGDAIGLAFQVHDDILDIEADTATLGKTQGADIALNKPTYPSLLGIDGAKAKAAQLHQQS 283 Query: 257 INDGKISVENLKKAFIIMRE 276 + ++E+ +++RE Sbjct: 284 LT----AIEHFDANALLLRE 299 >gi|304407206|ref|ZP_07388859.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] gi|304343647|gb|EFM09488.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] Length = 794 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 72/228 (31%), Positives = 116/228 (50%), Gaps = 13/228 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEY--RGDNHVLLACAIEFIHTATLLHDDVV--DD 87 D Y + GGKRLRP+LT + +Y R ++ V L ++E++HTA+L+ DD+ D+ Sbjct: 536 DAANYSLTGGGKRLRPILTWVMGVQ-QYGMRPESLVPLLRSLEYMHTASLIFDDLPSQDN 594 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV------ACTLA 141 + RRG+ V + T+ L G L+ +A + L+L+ A L Sbjct: 595 APTRRGRATLHEVHDSATAELTGLLLIQRATQEQASLAQFDPRSVLALIRYSSQKAEDLC 654 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G+ L+ +K +T E + KT + F AAL + +++A LKS+ + Sbjct: 655 AGQAMDLN-AKGKPLTLEQLNAICFYKTGIAFEAALVMPAILAQAPEQEIGLLKSFAYHA 713 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 GIAFQ+ DD+LD G+ N +GK +G+D N + +L + G KRE Sbjct: 714 GIAFQIKDDLLDVEGDANLLGKPVGQDADNNTSSFVTVLGLE-GAKRE 760 >gi|89073140|ref|ZP_01159679.1| putative geranyltranstransferase [Photobacterium sp. SKA34] gi|89051093|gb|EAR56550.1| putative geranyltranstransferase [Photobacterium sp. SKA34] Length = 300 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 12/238 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y GGKR RP LT T ML D+ A A+E IH +L+HDD+ +DD A Sbjct: 39 AMQYGTLLGGKRARPFLTYVTGEMLGLTQDDLDTPAAAVECIHAYSLIHDDLPAMDDDAF 98 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEA-LEALSLVACTLAEGELRQL 148 RRG+ + + ++L GD L + AF ++ + SQ+ + +++V+ + Sbjct: 99 RRGQPTCHIAFDEAMAILAGDALQTLAFDILASGQLSQDGNTQRIAMVSELAKASGAAGM 158 Query: 149 SLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMN 200 L + LD+ E + L +I + KT L A+ + +L AG + ++ L Y Sbjct: 159 CLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAAGDKGVAILPQLDKYSEA 218 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L ++ + ++ + Sbjct: 219 IGLAFQVQDDILDVISDTETLGKPQGSDLALDKSTYPALLGLDGAQEKAQQLYQEALQ 276 >gi|325265404|ref|ZP_08132128.1| geranyltranstransferase [Clostridium sp. D5] gi|324029405|gb|EGB90696.1| geranyltranstransferase [Clostridium sp. D5] Length = 296 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 16/221 (7%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 +I + ++Y + +GGKRLRPML T + G AIE IHT +L+HDD+ +D Sbjct: 31 VIMEAMEYALMAGGKRLRPMLMQETYRLFGGCGTRIEPFMAAIEMIHTYSLVHDDLPAMD 90 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLL-------SQAFCMVIETKSQEALEALSLVACT 139 + RRG+ +++G +L GD LL ++AF M E KS + +AL ++A Sbjct: 91 NDDYRRGRKTTHVMYGEDIGILTGDALLNCAFETAAKAFDMEPE-KSLQTGKALQILAGK 149 Query: 140 -----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G++ + S ++ E + K KT L A++ + +++AG A+ Sbjct: 150 AGIYGMIGGQVVDVK-STGDQISGEKLNFIYKLKTGALIEASMMIGAVLAGAAREQVNAV 208 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + +G+AFQ+ DD+LD E+GK I D +N K T Sbjct: 209 EEIAGKVGLAFQIQDDILDVTSTAEELGKPIHSDEKNEKTT 249 >gi|154686692|ref|YP_001421853.1| YqiD [Bacillus amyloliquefaciens FZB42] gi|154352543|gb|ABS74622.1| YqiD [Bacillus amyloliquefaciens FZB42] Length = 296 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 17/230 (7%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DD 83 +P+ +K Y + +GGKRLRP++ LA + + + CA+E IHT +L+H Sbjct: 29 MPETLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLP 88 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-------SLV 136 +DD LRRGK V+G +VL GD LL+++F + I + EA+ A L+ Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKL-ITSHVSEAVSAEKRLRLVDELI 147 Query: 137 ACTLAEGELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + EG + + ++ +T E+ + + KTA L ++ +++A + Sbjct: 148 SAAGTEGMVGGQAADMEAEQKRITLEELESIHERKTAKLLGFSVTAGAILADAPEDEVEK 207 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 L+ + ++GI FQ+ DD+LD G ++GK +G D N K T P +L + Sbjct: 208 LRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVGSDSSNEKSTYPSLLTLE 257 >gi|77409329|ref|ZP_00786032.1| geranyltranstransferase [Streptococcus agalactiae COH1] gi|77172061|gb|EAO75227.1| geranyltranstransferase [Streptococcus agalactiae COH1] Length = 290 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 75/254 (29%), Positives = 123/254 (48%), Gaps = 22/254 (8%) Query: 31 PDVVKYLIFS---GGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 PD++K +++S GGKR+RP + L +LE G D H +A A+E IHT +L+HDD Sbjct: 24 PDLIKAILYSVDGGGKRIRPRILLE---ILEGFGVELIDGHYDVAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLV 136 + +D+ RRG++ + T+VL GD L F +V++ + +E LS+ Sbjct: 81 LPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKAGFKADVTVRLIELLSMS 140 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A + + L + V D L +I +KT L + + ++A V+ L Sbjct: 141 AGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLAYPFXAAGILAEKSEEVKGKLH 200 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 G+ +G AFQ+ DD+LD E+GK +D K T P +L G + + Sbjct: 201 QAGLLIGHAFQVRDDILDVTASFEELGKTPNKDIVAEKTTYPNLL----GLDKSQEILDD 256 Query: 256 TINDGKISVENLKK 269 T+ + +NL+K Sbjct: 257 TLKKAQAIFQNLEK 270 >gi|253761777|ref|XP_002489263.1| hypothetical protein SORBIDRAFT_0011s005450 [Sorghum bicolor] gi|241947012|gb|EES20157.1| hypothetical protein SORBIDRAFT_0011s005450 [Sorghum bicolor] Length = 325 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 5/182 (2%) Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A GE++Q S + D+T +DYL KTA L +A+ +++ +GV S+ + + YG Sbjct: 148 FASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAIFSGVSTSICEQMYEYGR 207 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 NLG++FQ+VDD+LD+ ++GK G D G T PVI A Q ++ + I+ Sbjct: 208 NLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALQ-----DEPELREIIDS 262 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 ++L A ++ + + A G A +L+CLP S ++ +L +V + L+ Sbjct: 263 EFSETDSLAAAIELVHRSGGIRRAHELAREKGDMAIQNLQCLPRSDFRSTLESMVKYNLE 322 Query: 320 RL 321 R+ Sbjct: 323 RI 324 >gi|310766823|gb|ADP11773.1| Geranyltranstransferase [Erwinia sp. Ejp617] Length = 299 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 16/241 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L AT ML A AIE IH +L+HDD+ +D+ + Sbjct: 34 NAMEYGALLGGKRLRPFLVYATGDMLRANDAALDAPAAAIECIHAYSLIHDDLPAMDNDS 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLVA-----CT 139 LRRG+ + +G + ++L GD L + AF ++ + ++ + LS +A Sbjct: 94 LRRGQPTCHIKFGEEAAILAGDALQTLAFSILADAPMPGVVAESRIAMLSELAQASGVAG 153 Query: 140 LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSY 197 + G+ L+ K + + E + +H + KT L +A+ + +L AG + + AL + Sbjct: 154 MCGGQALDLAAEGKQVTLNELEQIH--RHKTGALIRSAVRLGALTAGERGRAALPALDRF 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G +GK G D + GK T P ++ + + ++ Sbjct: 212 ANAIGLAFQVQDDILDVTGATEVLGKQQGADQQLGKSTYPALMGLDNARIKAWELCQESL 271 Query: 258 N 258 N Sbjct: 272 N 272 >gi|229823205|ref|ZP_04449274.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271] gi|229787371|gb|EEP23485.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271] Length = 297 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 12/223 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDS 88 + ++Y + +GGKRLRP++ LA A+ E + A A+E+IHT +L+HDD+ +D+ Sbjct: 32 EAMRYSLKNGGKRLRPVMLLAVLAIQSEDLVKCGLKTAIALEYIHTYSLIHDDLPAMDND 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTL 140 LRRG+ +G ++L GD LL+ AF ++ + L+L+ + + Sbjct: 92 DLRRGQATNHKRFGEGLAILAGDALLTDAFQFLVSDDLLDDRTKLALIDQLSQASGSWGM 151 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ + ++ V + + KT LF ALE ++I G S QAL+ +G + Sbjct: 152 VAGQVGDIE-AEQTPVDYQGLKQIHDQKTGALFRFALEAGAIIGGADASTCQALRQFGRH 210 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+A+Q+ +D++D G GK D K T P +L Q Sbjct: 211 FGLAYQIHNDLMDVLGSQEVTGKVTQADQALTKSTYPSLLGLQ 253 >gi|91201536|emb|CAJ74596.1| similar to geranylgeranyl pyrophosphate (GGPP) synthetase [Candidatus Kuenenia stuttgartiensis] Length = 327 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 83/330 (25%), Positives = 146/330 (44%), Gaps = 36/330 (10%) Query: 14 KVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 K++ ++ + I D E + + + Y + + GKR+RP + L T L +N + A AIE Sbjct: 13 KIDDMLRELIPVDEENYLSEPIWYHMNTKGKRVRPAICLITCEALGGNPENALSFALAIE 72 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQ 127 +H L+HDD+ D +RR + + +G ++ GD+LL+ A+ V K Sbjct: 73 VLHNMFLMHDDIEDGDTVRRDQPTVWVKYGTANAINAGDYLLACAYKSTLASPVAPEKRL 132 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + LEAL+L EG+ ++ T Y+ +++ KT + + +++AG Sbjct: 133 KLLEALTLTYGKTVEGQALDINARAAESFTVAAYMKMVELKTGYYLACGMVGGAIVAGAS 192 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 N V + + G N+G AFQ+ DD++D G IG D + GK + Q + Sbjct: 193 NEVVEKIWMLGKNMGPAFQIRDDLIDLT-HGKGRGGVIGSDIKEGKASFLYSYVLQIASG 251 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE-----YRAYSYGQKAKDSLRCLP 302 +K + L++ + RE D E YR Y + A+D L Sbjct: 252 EQK--------------KKLREIMLKPREETTADDIEWVLDVYRRYDAMKYAQDYAENLV 297 Query: 303 DSSWK---------KSLM-EVVDFCLQRLN 322 ++K K++ E+ F QR++ Sbjct: 298 QQAYKTINEIPVDDKTIFKEIASFMAQRMS 327 >gi|331018236|gb|EGH98292.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 295 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 16/225 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSA 89 + ++Y + +GGKR+RP+L A L ++ ACA+E IH +L+H +DD Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLVACTLAE----- 142 LRRG+ + ++L GD L S AF ++ S++A L +V+ A Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSSRDAATRLQMVSTLAAAAGPAG 152 Query: 143 ---GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 G+ L S+ LD +Y+H + KT L A++ + +L +G + R AL+ Y Sbjct: 153 MVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASGQADQARLDALQVY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD + +GK G D KPT P +L Sbjct: 211 ARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGL 255 >gi|329926952|ref|ZP_08281352.1| polyprenyl synthetase [Paenibacillus sp. HGF5] gi|328938782|gb|EGG35158.1| polyprenyl synthetase [Paenibacillus sp. HGF5] Length = 809 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 75/235 (31%), Positives = 122/235 (51%), Gaps = 19/235 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--RGDNHVLLACAIEFIHTATLLHDDVV 85 E + D Y + GKRLRP+LT A+ EY + V L ++E++HTA+L+ DD+ Sbjct: 547 ESLIDAANYSLEGDGKRLRPILTWVMAVK-EYGLQASAIVPLLRSLEYMHTASLIFDDLP 605 Query: 86 --DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV------- 136 D+++ RRG+ V + T+ + G FL+ +A + E S E + +++ Sbjct: 606 SQDNASTRRGRPTLHQVHDSATAEITGLFLIQKA---IEEQSSLEGFDPKTVLKLIRYSS 662 Query: 137 --ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 A + G+ L+ SK ++ E V KT + F A+L + +++A V+ + L Sbjct: 663 QRAGDMCSGQAMDLN-SKGKALSLEQLNTVCYYKTGIAFEASLVMPAILAQVKETEIAIL 721 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 K + + GIAFQ+ DD+LD +G V ++GK G+D N T IL Q G RE Sbjct: 722 KKFAYHAGIAFQIQDDLLDVQGNVEQLGKPGGQDAENNTSTFVSILG-QEGASRE 775 >gi|229816079|ref|ZP_04446400.1| hypothetical protein COLINT_03135 [Collinsella intestinalis DSM 13280] gi|229808393|gb|EEP44174.1| hypothetical protein COLINT_03135 [Collinsella intestinalis DSM 13280] Length = 355 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 13/229 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + + GGKR+RP+L L A + D + AIE +A L+HDD+ D S LRRG Sbjct: 53 LAHFTAGGGKRVRPVLALLGAEAVGGCADQALSCGVAIELFQSAALIHDDIADASELRRG 112 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA------LEALSLVACTLAEGELRQ 147 + G ++ GD L++ F +V+ S A LE L + EG+ Sbjct: 113 EPCLYRTEGLGLAINAGDLALTRVFEIVLADGSLPAERRVRVLEELVRMERHTLEGQALD 172 Query: 148 LSLSKN--LDVTEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 L +++ DVT +DYL++I KTA + S + ++VR L G+ G+ Sbjct: 173 LGWARDGRWDVTSDDYLYMIDGKTAWYTVASPLYAGALAAGAEPDAVR-GLIEVGLPAGL 231 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR--GTKREK 250 AFQL DD+L+ G+ + GK+ D GK TL V+ A + G +R + Sbjct: 232 AFQLQDDLLNLVGDADAQGKDFRSDITEGKRTLAVVWALEHLGGAERSE 280 >gi|297588519|ref|ZP_06947162.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516] gi|297573892|gb|EFH92613.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516] Length = 271 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 16/233 (6%) Query: 30 IPDVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 I + ++Y I KRLRP+L L T M + A AIE IH +L+HDD+ +D Sbjct: 26 IGEAMRYTIVDDSAKRLRPLLFLLTYQMFNESITESLNYALAIELIHNYSLVHDDLECMD 85 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALSLVACTLAEGE 144 + RRGK+ +G +VLVGD LL+ +F ++ E+ E A A +V + G Sbjct: 86 NDEYRRGKLTVHKKYGEDIAVLVGDALLNYSFEVLSESIKNEFDAKCANYIVKKSGCFGM 145 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 ++ L + +++E++ + + KT L A+ + +++ V ++ L+ Y NLG+A Sbjct: 146 IKGQLLDIDSEISEKNIIEIYDKKTCNLLKASTVSAGILSRVGDNTLLKLEDYAFNLGMA 205 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 FQ++DD++DY D + K T IL ++G + + I Sbjct: 206 FQIIDDIMDYEN-----------DLKINKNTYVTILGKEKGIDDANKYSQRAI 247 >gi|302185471|ref|ZP_07262144.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae 642] Length = 295 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 118/239 (49%), Gaps = 16/239 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 + + +++ + + ++Y + +GGKR+RP+L A L ++ ACA+E IH + Sbjct: 20 LFQAPAPELDRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYS 79 Query: 79 LLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALS 134 L+H +DD LRRG+ + ++L GD L S AF ++ S++A L Sbjct: 80 LVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQ 139 Query: 135 LV-ACTLAEGELRQL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +V A A G + S+ LD +Y+H + KT L A++ + +L +G Sbjct: 140 MVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASG 197 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + R AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 198 HADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|162147645|ref|YP_001602106.1| geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5] gi|209542274|ref|YP_002274503.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161786222|emb|CAP55804.1| Geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5] gi|209529951|gb|ACI49888.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 311 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 72/236 (30%), Positives = 109/236 (46%), Gaps = 27/236 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y GGKRLR LT A + +A ++E +H +L+HDD+ +D+ Sbjct: 51 DAMRYATLGGGKRLRGYLTAEVASLFGVEPARAYRVAASVEMLHAYSLVHDDLPAMDNDD 110 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA-------- 141 LRRG+ + + T++L GD L + AF ++ +T + + + LA Sbjct: 111 LRRGQPSTHRKFDEATAILAGDALQTMAFEILTDTATHPSATIRIGLVAALAAASGAAGM 170 Query: 142 --------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 +GE R LSL E + LH +K T L A E +++ R Sbjct: 171 VGGQMIDMDGEGRALSLP------EVERLHALK--TGCLIRYAAEAGAILGDADLPARAR 222 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + +YG +LG AFQ+ DDVLD E+GK G+D GK T +L G RE Sbjct: 223 IAAYGRDLGAAFQIADDVLDATASAEELGKTAGKDQAAGKSTYVALLGVD-GAARE 277 >gi|119472098|ref|ZP_01614329.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Alteromonadales bacterium TW-7] gi|119445118|gb|EAW26411.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Alteromonadales bacterium TW-7] Length = 295 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 114/236 (48%), Gaps = 15/236 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87 I + Y +F+GGKRLRP L A ML + + +LA AIE IH+ +L+H +DD Sbjct: 32 IKEATHYSLFNGGKRLRPFLVYAVGEMLGAKKSDLDVLAAAIECIHSYSLVHDDLPAMDD 91 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----------ETKSQEALEALSLVA 137 LRRG +V+G ++L GD L + AF ++ + K AL S + Sbjct: 92 DDLRRGYPTCHIVYGEAQAILAGDALQTLAFELIATHNFNCSAQSQVKMIAALAHASGIE 151 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA-GVQNSVRQALKS 196 +A L + K + V E + +H K KT L + A+ + +L + + L Sbjct: 152 GMVAGQGLDIAATDKVVSVQELERIH--KLKTGALINCAITLGALCSEKADEQTLENLSV 209 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +G +G+AFQ+ DD+LD G+ +GK G D K T P +L ++ +N Sbjct: 210 FGYAIGLAFQVHDDILDVEGDTFILGKPQGSDIEANKATYPALLGMLGAKEKAQNL 265 >gi|90579835|ref|ZP_01235643.1| putative geranyltranstransferase [Vibrio angustum S14] gi|90438720|gb|EAS63903.1| putative geranyltranstransferase [Vibrio angustum S14] Length = 300 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 12/238 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y GGKR RP LT T ML D+ A A+E IH +L+HDD+ +DD AL Sbjct: 39 AMQYGTLLGGKRARPFLTYVTGEMLGVTQDDLDTPAAAVECIHAYSLIHDDLPAMDDDAL 98 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEA-LEALSLVACTLAEGELRQL 148 RRG+ + + ++L GD L + AF ++ + SQ+ + +++V+ + Sbjct: 99 RRGQPTCHIAFDEAIAILAGDALQTLAFDILANGQLSQDGNTQRIAMVSELAKASGAAGM 158 Query: 149 SLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMN 200 L + LD+ E + L +I + KT L A+ + +L AG + ++ L Y Sbjct: 159 CLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAAGDKGVAILPQLDKYAEA 218 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L ++ + ++ + Sbjct: 219 IGLAFQVQDDILDVISDTETLGKPQGSDLALDKSTYPALLGLDGAQEKAQLLYQEALQ 276 >gi|241894940|ref|ZP_04782236.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313] gi|241871658|gb|EER75409.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313] Length = 290 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 47/221 (21%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 + V + + ++Y + +GGKRLRPML+LA + ++ +A AIE IHT +L+HDD Sbjct: 25 SASVAELQEAMRYAVMAGGKRLRPMLSLAVIQTYGLPVNEYLKVASAIELIHTYSLIHDD 84 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----------------CMVIETK 125 + +DD LRRGK +G T++L GD L AF +VI Sbjct: 85 LPAMDDDELRRGKPTTHRAFGEDTAILAGDALQPLAFEWLTDLDQPLNDAQRVQLVIAMA 144 Query: 126 SQEA-----------LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 +EA+ A TLAE T+ + H KT L + Sbjct: 145 QAAGGAGMVAGQVLDIEAMKTSAVTLAE--------------TQAIHYH----KTGALIA 186 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 AL+ +++A ++ L +GM G+AFQ+ DD+ DY+ Sbjct: 187 YALQAGAIMANANEDIQNILHDFGMAYGLAFQIKDDIDDYQ 227 >gi|295090870|emb|CBK76977.1| Geranylgeranyl pyrophosphate synthase [Clostridium cf. saccharolyticum K10] Length = 298 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 24/245 (9%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++ E++ + L + + I + + Y + +GGKRLRP+L + +G Sbjct: 12 RETEEIVYSYLPQETGHQKTIFEAMNYSVRAGGKRLRPLLMREVYRLFGGQGKEVEPFMA 71 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IHT++L+HDD+ +D+ RRGK + +G +VL GD LL A +ET S+ Sbjct: 72 AIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDALLIYA----VETASR 127 Query: 128 EALEALSLVAC--------TLAE---------GELRQLSLSKNLDVTEEDYLHVIKSKTA 170 L V L+E G+ + L+ N V E + + KT Sbjct: 128 AFLSGADAVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELT-NKPVPREKLDFIYRLKTG 186 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L A++ + +++AG ++ N+G+AFQ+ DD+LD G +GK +G D + Sbjct: 187 ALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTGNEEVIGKPVGSDEK 246 Query: 231 NGKPT 235 N K T Sbjct: 247 NHKTT 251 >gi|152991761|ref|YP_001357482.1| geranyltranstransferase [Sulfurovum sp. NBC37-1] gi|151423622|dbj|BAF71125.1| geranyltranstransferase [Sulfurovum sp. NBC37-1] Length = 284 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 15/201 (7%) Query: 40 SGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 +GGKR RPML L+ E D+ + +A A+E HT +L+HDD+ +DD+ LRRG Sbjct: 32 AGGKRFRPMLLLSIVDTYEPMLYDSALPVALALEMFHTYSLIHDDLPAMDDADLRRGHQT 91 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD- 155 + T++L GD L S AF ++ + +E ++ + LV +G R + L + +D Sbjct: 92 LHKRFDEVTAILAGDALNSDAFYLIAKAPLREDVK-IKLVELLARDGGSRGMVLGQAIDC 150 Query: 156 --------VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + E LH +KTA L + +L++ ++I + V++AL +G++LG+ FQ+ Sbjct: 151 YFENRPLTIDEVKVLHT--NKTAKLIAVSLQMGAVIVRLAPDVQKALYDFGIDLGLLFQI 208 Query: 208 VDDVLDYRGEVNEMGKNIGED 228 DD++D E GK G D Sbjct: 209 QDDIIDETQTEEEAGKTTGND 229 >gi|254994133|ref|ZP_05276323.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL J2-064] Length = 233 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 11/197 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEGEL 145 K V+G+ T++L GD LL+ AF ++ E ++ ++L+ A + G+L Sbjct: 98 KYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEGMVGGQL 157 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + ++N VT E+ + KT L A+ ++ IA + L+ + N+GI F Sbjct: 158 ADME-AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGF 216 Query: 206 QLVDDVLDYRGEVNEMG 222 Q+ DD+LD G+ ++G Sbjct: 217 QISDDILDVIGDETKIG 233 >gi|85711191|ref|ZP_01042251.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] gi|85695104|gb|EAQ33042.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] Length = 295 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 80/251 (31%), Positives = 129/251 (51%), Gaps = 22/251 (8%) Query: 14 KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 ++N LI I S + + + Y + GGKR+RP LT+A A + ++ + ACA+E Sbjct: 17 RLNQLIESHIAS--SSLKEAMAYGVLLGGKRIRPYLTMAVAELCGAETNDALDAACAVEL 74 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---IETK--S 126 IH +L+HDD+ +DD LRRG + +G T+VL GD L + AF ++ +ETK S Sbjct: 75 IHAYSLIHDDLPAMDDDELRRGHPTCHIKFGEATAVLAGDALQTLAFEVLSTNLETKLSS 134 Query: 127 QEALEALS-LVACTLAEGELRQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 Q + + L + + A+G +L + +D E + +H K+ + SAAL V Sbjct: 135 QRRIAMIQHLASASGAKGMCFGQALDLDATGRAIDELELEKIHRHKTGALIRASAALGV- 193 Query: 181 SLIAGVQNSVRQALKS---YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +AG S +Q L + +G+A+Q+ DD+LD G MGK G D + K T Sbjct: 194 --LAGNDES-QQYLDHFCDFASWIGLAYQVYDDILDVVGNTEVMGKPQGSDEAHHKATYV 250 Query: 238 VILAFQRGTKR 248 +L +++ Sbjct: 251 ALLGLDGASEK 261 >gi|295116024|emb|CBL36871.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium SM4/1] Length = 298 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 24/245 (9%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++ E++ + L + + I + + Y + +GGKRLRP+L + +G Sbjct: 12 RETEEIVYSYLPQETGHQKTIFEAMNYSVRAGGKRLRPLLMREVYRLFGGQGKEVEPFMA 71 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IHT++L+HDD+ +D+ RRGK + +G +VL GD LL A +ET S+ Sbjct: 72 AIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDALLIYA----VETASR 127 Query: 128 EALEALSLVAC--------TLAE---------GELRQLSLSKNLDVTEEDYLHVIKSKTA 170 L V L+E G+ + L+ N V E + + KT Sbjct: 128 AFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELT-NKPVPREKLDFIYRLKTG 186 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L A++ + +++AG ++ N+G+AFQ+ DD+LD G +GK +G D + Sbjct: 187 ALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTGNEEVIGKPVGSDEK 246 Query: 231 NGKPT 235 N K T Sbjct: 247 NHKTT 251 >gi|163781563|ref|ZP_02176563.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp. 128-5-R1-1] gi|159882783|gb|EDP76287.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp. 128-5-R1-1] Length = 266 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 11/200 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y +F GKR+RP+LT+A A L ++ + + CAIE IH +L+HDD+ +D+ Sbjct: 29 EAMAYYLFQPGKRVRPLLTVAVASSLGGDEEDAITVGCAIEMIHNYSLIHDDLPAMDNDD 88 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-----VIETKSQEALEALSLVACTLAEGE 144 RRG + +G +VL GD LL+ AF + V T S E E + L+ + Sbjct: 89 FRRGLPSCHRKFGEAMAVLAGDALLTYAFELMSKEGVFRTLSPE--EVVKLINTIAVKSG 146 Query: 145 LRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + + LD+ E+ L + KTA LF A +S I + + + L+ G G+ Sbjct: 147 IGGMVGGQALDIGGEENLEEVNLKKTAALFEACF-ISGGIVSHRGDLFKELEEVGREFGL 205 Query: 204 AFQLVDDVLDYRGEVNEMGK 223 FQLVDD+LD G + +G+ Sbjct: 206 LFQLVDDILDRDGFYDLLGE 225 >gi|282864692|ref|ZP_06273747.1| Polyprenyl synthetase [Streptomyces sp. ACTE] gi|282560631|gb|EFB66178.1| Polyprenyl synthetase [Streptomyces sp. ACTE] Length = 689 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 113/229 (49%), Gaps = 12/229 (5%) Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 HDDV+D + RRG+ +A +WG ++L GD ++ M+ E +E E ++ + Sbjct: 90 YHDDVMDHAYERRGRPSANALWGQHLAILAGDCVMLSGLGMLAELGRREVAEGVA-ASER 148 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA----GVQNSVR-QAL 194 + G +R+ + +EE YL + KTA LF+ A + ++ A G Q R +AL Sbjct: 149 MCAGMVRESADLHAASRSEESYLQAVGGKTAELFALACRLGAMQANGNGGRQEDGREEAL 208 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 +G LG A+QL DD+LD E+GK + D G TLPVI A R + K Sbjct: 209 AGFGWQLGHAYQLRDDILDLTSTAEELGKPVNTDLAEGVYTLPVIRAVSRDQGLARLLGK 268 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 +++ E +A ++ + A+ +T+ A +Y +A D L L D Sbjct: 269 ------ELTQEEAARARGLVLASGAVEETQAVADAYVVRAADRLSTLTD 311 >gi|148359869|ref|YP_001251076.1| geranyltranstransferase [Legionella pneumophila str. Corby] gi|296107919|ref|YP_003619620.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy] gi|148281642|gb|ABQ55730.1| geranyltranstransferase [Legionella pneumophila str. Corby] gi|295649821|gb|ADG25668.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy] Length = 298 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 76/245 (31%), Positives = 117/245 (47%), Gaps = 25/245 (10%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHT 76 +L I I + Y +FSGGKR+RP+L +++ D VL +A A+E H Sbjct: 20 LLNEIIIPAPKIRSALHYALFSGGKRIRPILVYLAGDLIDV--DQGVLDIIAAALELTHC 77 Query: 77 ATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 +L+HDD+ +D+ LRRGK + + T++LVGD + + A +V+ T+ L A Sbjct: 78 YSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVVL-TRLSPLLPAAQ 136 Query: 135 LVACT-----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +VA T + G+ LS L VTEE + KT L A E ++ Sbjct: 137 VVAITQVLVNASGISGMVSGQSLDLSELAKLSVTEEQLREIHLLKTGKLILACFE---MV 193 Query: 184 AGVQN----SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 QN ++ AL++YG ++G+ FQ+ DD LD +GK D N K T + Sbjct: 194 LAAQNEISEQIKSALRTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSSDQANQKTTFATL 253 Query: 240 LAFQR 244 Q+ Sbjct: 254 FNKQQ 258 >gi|148260202|ref|YP_001234329.1| polyprenyl synthetase [Acidiphilium cryptum JF-5] gi|326402853|ref|YP_004282934.1| geranyltranstransferase [Acidiphilium multivorum AIU301] gi|146401883|gb|ABQ30410.1| farnesyl-diphosphate synthase [Acidiphilium cryptum JF-5] gi|325049714|dbj|BAJ80052.1| geranyltranstransferase [Acidiphilium multivorum AIU301] Length = 301 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 14/225 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + GGKR+R L + TA + V +A A+E +H +L+HDD+ Sbjct: 41 EAMRYAVLGGGKRMRGFLVIETARLFSVNITCAVRVAAAVEMLHAYSLVHDDLPAMDDDD 100 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-----LSLVACTLAEGE 144 LRRGK + + T++L GD L ++AF ++ E + E L+L A + A G Sbjct: 101 LRRGKPSCHKAFDEATAILAGDALQTRAFEVLAEPDTHSDPEVRCELVLALAAASGARGM 160 Query: 145 LRQ-----LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + +S + L+ L +K+ + FSA E +++ R + YG Sbjct: 161 VGGQMIDIVSEGRQLEPPVITRLQALKTGRLIQFSA--EAGAILGRAPGPQRHHIAGYGR 218 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +LG AFQ+ DD+LD G +GK G+D GK T+ ++ +R Sbjct: 219 DLGAAFQIADDILDEEGSDASLGKTAGKDAAQGKATMVAVMGIER 263 >gi|330959939|gb|EGH60199.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 295 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 113/226 (50%), Gaps = 16/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L A L ++ ACA+E IH +L+HDD+ Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACTLAE----- 142 LRRG+ + ++L GD L S AF ++ S++A L +V+ A Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSSRDAETRLQMVSTLAAAAGPAG 152 Query: 143 ---GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 G+ L S+ LD +Y+H + KT L A++ + +L +G + R AL+ Y Sbjct: 153 MVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASGHADQPRLAALQVY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+ DD+LD + +GK G D KPT P ++ Q Sbjct: 211 ARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALIGLQ 256 >gi|167627431|ref|YP_001677931.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597432|gb|ABZ87430.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 293 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 78/268 (29%), Positives = 135/268 (50%), Gaps = 20/268 (7%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 I S + + + +KY FSGGKR+R A N +A AIE IHT +L Sbjct: 18 FSEIQSPSKKLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCHKIAFAIECIHTYSL 77 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSL 135 +HDD+ +D+ LRRGK + + T++L GD L S F ++ ++ L+ +++ Sbjct: 78 IHDDLPAMDNDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINTLDINDIYKLKKVNI 137 Query: 136 V--ACTLAEGEL--RQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 V C EG + +QL + ++NL + + + LH+ +KTA +F A++ + +++ N Sbjct: 138 VFAKCCGLEGMVGGQQLDIDGENQNLKLQDLEILHI--NKTAKMFRASIVLPYIVSKYNN 195 Query: 189 SVRQALKSYGMNL-GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + + +L G+ FQ+ DD+LD E+GK G+D K T ++ K Sbjct: 196 DEFETILTKVSDLIGLCFQIKDDILDVTRSTQELGKTSGKDINANKSTYVSLMGLDGANK 255 Query: 248 R---EKNFWK---STINDGKISVENLKK 269 +KN + S +N +S +NL+K Sbjct: 256 YLFDKKNEIRKLLSELNKKNLSTQNLEK 283 >gi|118595179|ref|ZP_01552526.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Methylophilales bacterium HTCC2181] gi|118440957|gb|EAV47584.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Methylophilales bacterium HTCC2181] Length = 296 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 123/238 (51%), Gaps = 21/238 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV- 84 D ++ +V +Y + +GGKRLR +L A + + + LA A+E IH +L+HDD+ Sbjct: 29 DQSLLKNVCEYAVLNGGKRLRSLLIYAISNYSDGYDTHFNCLALAVEMIHAYSLVHDDLP 88 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSLVACT 139 +DD LRRGK + + + ++L GD L S AF ++ + + ++ L++++ + Sbjct: 89 SMDDDELRRGKPSCHIKYDEAQAILGGDALQSLAFELLSSDKFNVQDKVKIKVLNMLSQS 148 Query: 140 LAEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L ++L +++D+ D+L + KT L A+ +S +I+ N Sbjct: 149 IG---LHGMALGQSIDIDSANKELNLKSLDHLQAL--KTGALIEASCVMSYVISDKYNQK 203 Query: 191 RQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + S G +G +Q+ DD+LD+ + N +GK IG+D ++ K T ++ K Sbjct: 204 HEKDIASIGKLIGSIYQITDDILDFESDTNTLGKTIGKDAKDKKATYITLMGVTEAKK 261 >gi|317455530|pdb|3Q1O|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter Pylori Complexed With Magnesium And Isoprenyl Diphosphate gi|317455531|pdb|3Q1O|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter Pylori Complexed With Magnesium And Isoprenyl Diphosphate gi|317455532|pdb|3Q1O|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter Pylori Complexed With Magnesium And Isoprenyl Diphosphate gi|317455533|pdb|3Q1O|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter Pylori Complexed With Magnesium And Isoprenyl Diphosphate Length = 310 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 78/273 (28%), Positives = 143/273 (52%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 50 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 109 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 110 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESHIIVELIKILSANGGI 165 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 166 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLIMGLVASGIKDEELFKWLQ 223 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D + K + +L +R + Sbjct: 224 AFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLERANNYAQTLKTE 281 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND ++ LK A+ +++EN AL++T ++ Sbjct: 282 VLND----LDALKPAYPLLQENLNALLNTLFKG 310 >gi|291009770|ref|ZP_06567743.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 274 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 3/179 (1%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H +LLHDDV+D RR + ++G ++L GD +L A ++ T S+ AL Sbjct: 24 ELLHNFSLLHDDVMDGDLTRRHRPTVWSLFGTSNAILAGDAILGLAPRILSATGSEHALT 83 Query: 132 ALSLVA-CT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A+ C L EG+ +S S+ +DV + + + ++KT L + + L AG Sbjct: 84 AIDWFGKCVVKLCEGQAADISFSERVDVGIDACVAMARAKTGELLGTSCALGGLFAGADR 143 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + AL+ +G +G+AFQLVDD+L G+ GK + D + K +LPV A GT+ Sbjct: 144 TQITALREFGSEIGLAFQLVDDLLGIWGDPAVTGKPVRSDLVDRKKSLPVTAALGSGTQ 202 >gi|292659743|pdb|3LLW|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter Pylori 26695 gi|292659744|pdb|3LLW|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter Pylori 26695 gi|292659745|pdb|3LLW|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter Pylori 26695 gi|292659746|pdb|3LLW|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter Pylori 26695 Length = 311 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 78/273 (28%), Positives = 143/273 (52%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 43 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 102 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 103 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESHIIVELIKILSANGGI 158 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 159 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLIMGLVASGIKDEELFKWLQ 216 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D + K + +L +R + Sbjct: 217 AFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLERANNYAQTLKTE 274 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND ++ LK A+ +++EN AL++T ++ Sbjct: 275 VLND----LDALKPAYPLLQENLNALLNTLFKG 303 >gi|226951627|ref|ZP_03822091.1| geranyltranstransferase (farnesyldiphosphate synthase) [Acinetobacter sp. ATCC 27244] gi|226837608|gb|EEH69991.1| geranyltranstransferase (farnesyldiphosphate synthase) [Acinetobacter sp. ATCC 27244] Length = 303 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 26/250 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA L + A A+E IH +L HDD+ Sbjct: 34 EPLKAAVHHAVMLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ--------EALEA 132 +D+ LRRG+ +V+G T++L GD L S AF + + + Q + ++ Sbjct: 94 MDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILGSRLFDEQGQGIDSQIVLKQMQI 153 Query: 133 LSLVACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNS 189 L+ + + G++ L K +D TE + +H ++KT L AA+ + ++ AG + Sbjct: 154 LATASSKMVAGQVLDLQAEGKQVDQTELENIH--RNKTGALIQAAIMMGAVTVFAGTDPA 211 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + + L+ +G +G+AFQ+ DD+LD +GK G+D + K T P ++ ++ Sbjct: 212 IPK-LRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAKT-- 268 Query: 250 KNFWKSTIND 259 + T++D Sbjct: 269 ---YAQTLHD 275 >gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5] gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5] Length = 295 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 16/225 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L A L + + ACA+E IH +L+HDD+ Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL-VACTLAE------ 142 LRRG+ + ++L GD L S AF +++ +A + L + TLA+ Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRMVTTLAQAAGPAG 152 Query: 143 ---GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSY 197 G+ L S+ LD +Y+H + KT L A++ + +L +G + +AL++Y Sbjct: 153 MVGGQAIDLGSVGLKLDQQALEYMH--RHKTGALIEASVILGALASGRAEKGELKALQTY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD + +GK G D KPT P +L Sbjct: 211 AQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGL 255 >gi|320536661|ref|ZP_08036676.1| polyprenyl synthetase [Treponema phagedenis F0421] gi|320146483|gb|EFW38084.1| polyprenyl synthetase [Treponema phagedenis F0421] Length = 399 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 21/222 (9%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 K L+ GGKR RP++ + +A + L IEFIHTA+L+HDD+ D + RRG Sbjct: 108 KDLVLRGGKRWRPLVAVLSAELACGDAYRAYALTPVIEFIHTASLIHDDIEDSAETRRGA 167 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A + +G T++ +L A ++ S L+ LSL L L L + + Sbjct: 168 PAIHIQYGTDTAINAASWLYFHAMSIINAYPSSSELK-LSLYRTV--NKNLTNLHLGQAM 224 Query: 155 DV----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM---NL 201 D+ + +Y+ +I KT L A E+ L G +A + YG ++ Sbjct: 225 DIDWHRNSNFIPSRAEYMAMIALKTGSLARLAAEIGFLAGGAG---EEATEQYGKTMESI 281 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 GI FQ++DD + G GKNIG+D GK + PVI + Sbjct: 282 GIGFQILDDAKNITG--GNKGKNIGDDIVEGKKSFPVIFHLE 321 >gi|76818772|ref|YP_335377.1| geranyltranstransferase [Burkholderia pseudomallei 1710b] gi|126458601|ref|YP_001075667.1| geranyltranstransferase [Burkholderia pseudomallei 1106a] gi|167725531|ref|ZP_02408767.1| polyprenyl synthetase [Burkholderia pseudomallei DM98] gi|167828246|ref|ZP_02459717.1| polyprenyl synthetase [Burkholderia pseudomallei 9] gi|167849704|ref|ZP_02475212.1| polyprenyl synthetase [Burkholderia pseudomallei B7210] gi|242313506|ref|ZP_04812523.1| geranyltranstransferase [Burkholderia pseudomallei 1106b] gi|254264895|ref|ZP_04955760.1| geranyltranstransferase [Burkholderia pseudomallei 1710a] gi|76583245|gb|ABA52719.1| geranyltranstransferase [Burkholderia pseudomallei 1710b] gi|126232369|gb|ABN95782.1| geranyltranstransferase [Burkholderia pseudomallei 1106a] gi|242136745|gb|EES23148.1| geranyltranstransferase [Burkholderia pseudomallei 1106b] gi|254215897|gb|EET05282.1| geranyltranstransferase [Burkholderia pseudomallei 1710a] Length = 322 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 20/241 (8%) Query: 20 LKRI--CSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L RI C+D + + ++Y +F GGKRLRP+L A +++ + ++ IE IH Sbjct: 44 LDRILPCADGRLTALHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIH 103 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-- 131 +L+ DD+ +D+ LR G++ + T++L D L+SQAF + E + Sbjct: 104 VFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAFLALSEAPLPLDVRVA 163 Query: 132 -----ALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 A S+ L G+ L S+ +LD TE + +H + KT L AA+ + L Sbjct: 164 LMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMH--RMKTGALIRAAVRMGVLCGT 221 Query: 186 VQNS----VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 V + +A+ YG LG+A+Q+VDD+LD + +GK G+D R K T +L Sbjct: 222 VPGAELGAAWRAVSEYGERLGLAYQVVDDILDSTAATSVLGKTAGKDARANKATYVTVLG 281 Query: 242 F 242 Sbjct: 282 L 282 >gi|327469005|gb|EGF14477.1| geranyltranstransferase [Streptococcus sanguinis SK330] Length = 291 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 34/272 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEF 73 +F +++ SD + +V+ Y + +GGKR+RP+L L A LE + H +A A+E Sbjct: 16 DFYRSQQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLEL-AEAHYQVAAALEM 71 Query: 74 IHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQ-- 127 IHT +L+HDD+ RRG++ + +G ++L GD L + ++ E SQ Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVK 131 Query: 128 -EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + LSL A + +GE + +SL ED ++ +KT L + Sbjct: 132 VDLISELSLAAGSFGMVAGQVLDMQGEGQAISL--------EDLKNIHANKTGKLLTYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LIA + V+ L+ G LG+AFQ+ DD+LD ++GK +D K T P Sbjct: 184 VAAGLIAEAEQPVQDKLRRIGELLGLAFQVRDDILDVTASFEKLGKTPRKDLAAAKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKK 269 L G KNF+ T+++ + + +L++ Sbjct: 244 AFL----GLDGAKNFFNQTLDEAVVILSDLEE 271 >gi|331091277|ref|ZP_08340118.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404724|gb|EGG84263.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium 2_1_46FAA] Length = 296 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 28/252 (11%) Query: 19 ILKRICSDV----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 IL++ D E I + ++Y + +GGKR+RPML T M G AIE I Sbjct: 17 ILRKYLPDSSGHQEKIMEAMEYNLMAGGKRIRPMLMKETYEMFGGTGKIIEPFMAAIEMI 76 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ----- 127 HT +L+HDD+ +D+ RRG+ +V+G +L GD LL+ AF ET S+ Sbjct: 77 HTYSLIHDDLPAMDNDDYRRGRKTTHIVYGEAMGILAGDALLNYAF----ETASEAFDMD 132 Query: 128 --------EALEALSLVACT--LAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAA 176 +AL+ L A + G++ ++ S K +D D+++ +K T L A+ Sbjct: 133 RDNGYLIGKALQILGRKAGIYGMIGGQVVDVAASGKAVDKDVLDFIYDLK--TGALIEAS 190 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + + +++AG + ++S +G+AFQ+ DD+LD +GK I D +N K T Sbjct: 191 MMIGAILAGATEQEVKIIESAAKKVGLAFQIQDDILDVTSTKEVLGKPIHSDEKNEKTTY 250 Query: 237 PVILAFQRGTKR 248 + F + ++ Sbjct: 251 VTLEGFDQAKEQ 262 >gi|42527045|ref|NP_972143.1| polyprenyl synthetase family protein [Treponema denticola ATCC 35405] gi|41817469|gb|AAS12054.1| polyprenyl synthetase family protein [Treponema denticola ATCC 35405] Length = 350 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 84/280 (30%), Positives = 142/280 (50%), Gaps = 29/280 (10%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 I + V+ L+ GGKR RP+L + + + E + L IEF HTA+L+HDD+ D S Sbjct: 53 IINPVRDLVKRGGKRWRPLLCVLSCELAEGDPEKAYPLTPLIEFCHTASLVHDDIEDKSD 112 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG AA + +G T++ +L +A +I + E++ A V +L LR+L Sbjct: 113 TRRGAPAAHIKYGLDTALNSASWLYFEALNPLINYEVSESVRA---VIYSLYSQNLRRLH 169 Query: 150 LSKNLDV----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG- 198 L +++D+ + ++Y+ +I KT L A E+ + AG + + L+ YG Sbjct: 170 LGQSMDIGWHSNSDIIPSVDEYITMISLKTGSLAKLAGELGFIAAG--KPINEVLE-YGK 226 Query: 199 --MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ---RGTKREKNFW 253 ++GI FQ++DDV + E N GK G+D GK +LP+I + G ++ K + Sbjct: 227 LMTDMGIGFQILDDVKNIT-EGN-AGKRRGDDIVEGKKSLPLIFYTEENPEGVEKIKLLF 284 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293 K +G I ++ + + ++A+ RA YG+K Sbjct: 285 KQAAKEG-IESPAVEASISAICSSKAV----KRAEDYGKK 319 >gi|15645545|ref|NP_207721.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695] gi|2314066|gb|AAD07974.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695] Length = 303 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 78/273 (28%), Positives = 143/273 (52%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLIMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D + K + +L +R + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLERANNYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND ++ LK A+ +++EN AL++T ++ Sbjct: 273 VLND----LDALKPAYPLLQENLNALLNTLFKG 301 >gi|325569748|ref|ZP_08145772.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755] gi|325157053|gb|EGC69219.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755] Length = 298 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 124/242 (51%), Gaps = 14/242 (5%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA- 70 +E+V +K SD + + +Y I +GGKR+RP+L AT ++ N + CA Sbjct: 15 IEEVMERFVKEHTSDQRLFKSM-QYSIQAGGKRIRPLLLAATVAAF-HKPVNTAVYQCAA 72 Query: 71 -IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETK 125 +E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ AF +V E + Sbjct: 73 ALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAMAEIE 132 Query: 126 SQEA---LEALSLVACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + L+ LS A T + G+ + +N ++ E+ + + + KT L A+ Sbjct: 133 ANQKVLLLQQLSKAAGTQGMVAGQAADIQ-GENQALSLEELMSIHERKTGELIRFAVIAG 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A V L + ++G+AFQ+ DD+LD E+GK + D K T P +L Sbjct: 192 GVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGKVVRRDDELAKSTYPALL 251 Query: 241 AF 242 Sbjct: 252 GL 253 >gi|226198039|ref|ZP_03793611.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9] gi|225929915|gb|EEH25930.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9] Length = 344 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 20/241 (8%) Query: 20 LKRI--CSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L RI C+D + + ++Y +F GGKRLRP+L A +++ + ++ IE IH Sbjct: 66 LDRILPCADGRLTALHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIH 125 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-- 131 +L+ DD+ +D+ LR G++ + T++L D L+SQAF + E + Sbjct: 126 VFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAFLALSEAPLPLDVRVA 185 Query: 132 -----ALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 A S+ L G+ L S+ +LD TE + +H + KT L AA+ + L Sbjct: 186 LMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMH--RMKTGALIRAAVRMGVLCGT 243 Query: 186 VQNS----VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 V + +A+ YG LG+A+Q+VDD+LD + +GK G+D R K T +L Sbjct: 244 VPGAELGAAWRAVSEYGERLGLAYQVVDDILDSTAATSVLGKTAGKDARANKATYVTVLG 303 Query: 242 F 242 Sbjct: 304 L 304 >gi|166030417|ref|ZP_02233246.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC 27755] gi|166029775|gb|EDR48532.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC 27755] Length = 300 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 16/233 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV-- 84 +I + + Y + +GGKRLRPML T + + G + V+ AIE +HT +L+HDD+ Sbjct: 35 IIMEAMGYSLLAGGKRLRPMLMKETYTL--FGGHSKVIEPFMAAIEMVHTYSLVHDDLPA 92 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D+ RRG+ +V+G ++L GD LL+ AF ++ E +++++ GE Sbjct: 93 MDNDEYRRGRKTTHVVYGEDMAILAGDALLNYAFETAVKAFVLEPEDSMTIGNAIRVLGE 152 Query: 145 ---LRQLSLSKNLDVTE------EDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQAL 194 + + + +DV E +D L I KT L AA+ + +++ G + + Sbjct: 153 KAGIYGMLGGQVIDVKETGHAVSKDVLDTIYELKTGALIEAAMMIGAILGGASQEEVKTV 212 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + +G+AFQ+ DD+LD E+GK I D +N K T +L K Sbjct: 213 ERIASLVGLAFQVQDDILDVISTQEELGKPIHSDEKNEKTTYVTLLGIDDAKK 265 >gi|261406506|ref|YP_003242747.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10] gi|261282969|gb|ACX64940.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10] Length = 794 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 75/235 (31%), Positives = 122/235 (51%), Gaps = 19/235 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--RGDNHVLLACAIEFIHTATLLHDDVV 85 E + D Y + GKRLRP+LT A+ EY + V L ++E++HTA+L+ DD+ Sbjct: 532 ESLIDAANYSLEGDGKRLRPILTWVMAVK-EYGLQATAIVPLLRSLEYMHTASLIFDDLP 590 Query: 86 --DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV------- 136 D+++ RRG+ V + T+ + G FL+ +A + E S E + +++ Sbjct: 591 SQDNASTRRGRPTLHQVHDSATAEITGLFLIQKA---IEEQSSLEGFDPKTVLKLIRYSS 647 Query: 137 --ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 A + G+ L+ SK ++ E V KT + F A+L + +++A V+ + L Sbjct: 648 QRAGDMCSGQAMDLN-SKGKALSLEQLNTVCYYKTGIAFEASLVMPAILAQVKETEIAIL 706 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 K + + GIAFQ+ DD+LD +G V ++GK G+D N T IL Q G RE Sbjct: 707 KKFAYHAGIAFQIQDDLLDVQGNVEQLGKPGGQDAENNTSTFVSILG-QEGASRE 760 >gi|327461660|gb|EGF07991.1| geranyltranstransferase [Streptococcus sanguinis SK1] gi|327489513|gb|EGF21306.1| geranyltranstransferase [Streptococcus sanguinis SK1058] Length = 291 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 34/272 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEF 73 +F +++ SD + +V+ Y + +GGKR+RP+L L A LE + H +A A+E Sbjct: 16 DFYRSQQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLEL-AEAHYQVASALEM 71 Query: 74 IHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQ-- 127 IHT +L+HDD+ RRG++ + +G ++L GD L + ++ E SQ Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVK 131 Query: 128 -EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + LSL A + +GE + +SL D + +KT L + Sbjct: 132 VDLISELSLAAGSFGMVAGQVLDMQGEGQAISLG--------DLKTIHANKTGKLLTYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LI Q SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T P Sbjct: 184 VAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKK 269 L G KNF+ T+++ + + +L++ Sbjct: 244 AFL----GLDGAKNFFNQTLDEAVLILSDLEE 271 >gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea] Length = 367 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 21/231 (9%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 MI + ++Y + +GGKR+RP+L +A ++ N V ACA+E IHT +L+HDD+ Sbjct: 100 MIHEAMRYSLLAGGKRVRPILCIAACELVGGEESNSVPAACAVEMIHTMSLIHDDLPCYG 159 Query: 87 DSALRRGKVAARLVWGNQ-TSVLVGDFLLSQAF-CMVIETKSQEALEALS---------- 134 LRRGK + +VL GD LL+ +F + TK+ + S Sbjct: 160 QRDLRRGKAHETTKSSCEDVAVLAGDSLLAFSFEYIATATKNVSPAKNFSRSRRISKSIG 219 Query: 135 ---LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LVA +A+ + + LD E ++H KTA L AA+ + +++ G Sbjct: 220 TEGLVAGQVADFVINGENQMFGLDQLEFIHIH----KTAALLEAAVVLGAILGGGNPEEV 275 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + L+ + +G+ FQ+VDD+LD E+GK G+ GK T P ++ Sbjct: 276 EKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKRSCGGKTTYPKLMGL 326 >gi|23099332|ref|NP_692798.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831] gi|22777561|dbj|BAC13833.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831] Length = 294 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 18/239 (7%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 IP+ +K Y + +GGKRLRP+L LA+ + D + A AIE IHT +L+HDD+ Sbjct: 29 IPNNLKESMLYSLNAGGKRLRPILILASYEVYGKTLDKVMSSAVAIEMIHTYSLIHDDLP 88 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET---KSQEALEALSLVA--- 137 RRGK+ + T++L GD LL+ +F ++ S E +E + +++ Sbjct: 89 AMDDDDYRRGKLTNHKQFNEATAILAGDALLTYSFQLISSDDLLTSDEKVELIRILSEAS 148 Query: 138 --CTLAEGELRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G++ + K EE + +H +K+ + F A+ + + G ++ + L Sbjct: 149 GPAGMVAGQILDMEAEKQAVTLEEMEEIHALKTGELIRF--AIIAGAYLGGATDNQLKHL 206 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 Y LG+ FQ+ DD+LD G+ +++GK +G D N K T P +L Q G +KN + Sbjct: 207 TDYAYYLGLIFQVQDDILDITGDASKIGKPVGSDELNEKSTYPKLLGLQ-GAIDQKNLY 264 >gi|313901601|ref|ZP_07835040.1| farnesyl-diphosphate synthase [Thermaerobacter subterraneus DSM 13965] gi|313468131|gb|EFR63606.1| farnesyl-diphosphate synthase [Thermaerobacter subterraneus DSM 13965] Length = 328 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 25/239 (10%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE------ 72 +L + + I + ++Y +GGK LRP+L +A A + G V+ Sbjct: 50 VLPPVTAPPSRIHEAMRYSTLAGGKALRPVLLMAAARCV---GGPQVVTPAVERAAAAVE 106 Query: 73 FIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA- 129 +HT +L+HDD+ +RRG+ A +V+G ++L GD LL+ AF ++ A Sbjct: 107 LVHTYSLIHDDLPAMDDDDMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGAD 166 Query: 130 -------LEALSLVACT--LAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +E L++ A T L G++ L + + LD+ +H + KT LF A + Sbjct: 167 PAVALAVVEELAVAAGTAGLIGGQVDDLAATTAAGLDLAGLQSIH--RRKTGALFRACVR 224 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + +AG + +AL ++ G AFQ+VDD+LD G+ E+GK +G D R GK T+P Sbjct: 225 MGARLAGATATELEALTAFATAFGEAFQIVDDILDVTGDEAELGKPVGSDARQGKVTVP 283 >gi|54308001|ref|YP_129021.1| putative geranyltranstransferase [Photobacterium profundum SS9] gi|46912427|emb|CAG19219.1| putative geranyltranstransferase [Photobacterium profundum SS9] Length = 300 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 16/240 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +KY GGKR RP LT T ML + A A+E IH +L+HDD+ +DD L Sbjct: 39 TMKYGTLLGGKRARPFLTYITGQMLGAECADLDTPAAAVECIHAYSLIHDDLPAMDDDEL 98 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK------SQEALEALSLVACTLAEGE 144 RRG + + ++L GD L + AF ++ + K +Q L + A G Sbjct: 99 RRGHPTCHIAFDEALAILAGDALQTLAFEILADGKLNDDGNTQRIAMIKELAQASGAAGM 158 Query: 145 LRQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYG 198 +L K++D+ + + +H K KT L A+ + +L AG + +V L + Sbjct: 159 CVGQALDLEAEGKHVDLQQLETIH--KHKTGALIRCAVRLGALAAGQKGVAVLPQLNQFA 216 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L + ++ + ++ + Sbjct: 217 DAIGLAFQVQDDILDVTSDTETLGKPQGSDLALDKSTYPALLGLEGAQQKTQQLYQEALQ 276 >gi|294139891|ref|YP_003555869.1| geranyltranstransferase [Shewanella violacea DSS12] gi|293326360|dbj|BAJ01091.1| geranyltranstransferase [Shewanella violacea DSS12] Length = 293 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 80/273 (29%), Positives = 126/273 (46%), Gaps = 21/273 (7%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPD-----VVKYLIFSGGKRLRPMLTLATALML 57 ML D + ++V+ + K I D + I D +K+ GGKR+RP L A ML Sbjct: 1 MLIDTITRYQQRVDSQLEKII--DAQTITDPKLLAAIKHGALLGGKRIRPFLVYAIGDML 58 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 A AIE +H +L+HDD+ +DD ALRRG+ + + T++L GD L + Sbjct: 59 NIPLKKLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEATAILAGDALQA 118 Query: 116 QAFCMVIET-KSQEALEALSLVAC--------TLAEGELRQLSLS-KNLDVTEEDYLHVI 165 F ++ E E + L++V + G+ L+ + K +D+ LH Sbjct: 119 LGFEIICEPIDGIEPSQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTKLH-- 176 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 K KT L A+E+ + A V + L + +G+AFQ+ DDVLD E+GK Sbjct: 177 KLKTGALIRCAVELPMIAAQVSPEEQTLLLEFADTIGLAFQVQDDVLDIISSTEELGKPQ 236 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 G D + K T P +L K+ + ++ Sbjct: 237 GSDCESNKSTYPRLLGLAGAQATAKSLIEDALS 269 >gi|254191045|ref|ZP_04897550.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237] gi|254301703|ref|ZP_04969146.1| geranyltranstransferase [Burkholderia pseudomallei 406e] gi|157811595|gb|EDO88765.1| geranyltranstransferase [Burkholderia pseudomallei 406e] gi|157938718|gb|EDO94388.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237] Length = 362 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 20/241 (8%) Query: 20 LKRI--CSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L RI C+D + + ++Y +F GGKRLRP+L A +++ + ++ IE IH Sbjct: 84 LDRILPCADGRLTALHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIH 143 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-- 131 +L+ DD+ +D+ LR G++ + T++L D L+SQAF + E + Sbjct: 144 VFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAFLALSEAPLPLDVRVA 203 Query: 132 -----ALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 A S+ L G+ L S+ +LD TE + +H + KT L AA+ + L Sbjct: 204 LMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMH--RMKTGALIRAAVRMGVLCGT 261 Query: 186 VQNS----VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 V + +A+ YG LG+A+Q+VDD+LD + +GK G+D R K T +L Sbjct: 262 VPGAELGAAWRAVSEYGERLGLAYQVVDDILDSTAATSVLGKTAGKDARANKATYVTVLG 321 Query: 242 F 242 Sbjct: 322 L 322 >gi|295425229|ref|ZP_06817932.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664] gi|295065005|gb|EFG55910.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664] Length = 289 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 127/255 (49%), Gaps = 10/255 (3%) Query: 15 VNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAI 71 +N + K + ++V + I ++ Y + +GGKRLRP+L LAT L ++ + +AC I Sbjct: 15 INEYLNKHLANEVDDQKISQIMAYSVMAGGKRLRPLLFLATLNTLGKEITEDEIRIACGI 74 Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQE 128 E IHT +L+HDD+ +D+ RRGK+ + WG S+L GD LL + E +KS E Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAESILAGDALLPMGIQWIAEGSKSAE 134 Query: 129 ALEALSLVACT--LAEGELRQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIA 184 ++ ++ + G+ + + N V + +++ ++ KT L A++++++++ Sbjct: 135 LVQIITQAVGPNGMVGGQYLDIDSTNNQSVAGDAKFINRMEWLKTGCLIEASVKMAAVLV 194 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G L + G ++Q+ DD++D E GK +D GK +L + Sbjct: 195 GASQIEEVKLVDFAKVFGRSYQIYDDLVDVVESSQEAGKATHKDQEKGKNNTLTLLGIDK 254 Query: 245 GTKREKNFWKSTIND 259 K + K +D Sbjct: 255 SRKELTDLIKQAKDD 269 >gi|145298029|ref|YP_001140870.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850801|gb|ABO89122.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida A449] Length = 296 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 31/262 (11%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYR 60 L+D + ++++ + ++ S M P D ++Y + GGKR+RP L A ML + Sbjct: 3 LDDFSRLHRQRIDDCLSAQLESLPAMAPRLRDAMRYGLLLGGKRVRPFLVYAVGEMLGVK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + A A+E IH +LLHDD+ +D+ LRRG+ + T++L GD L + AF Sbjct: 63 RELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLAF 122 Query: 119 CMVIETKSQEALEALSL-VACTLA----------------EGELRQLSLSKNLDVTEEDY 161 ++ + + L A + + TLA + E RQ+SL E + Sbjct: 123 SILADHPLPDRLLANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLP------ELEQ 176 Query: 162 LHVIKSKTAVLFSAALEVSSLI-AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 +H + KT L A+ + +L A V ++ AL++Y +G+AFQ+ DD+LD G+ Sbjct: 177 VH--RHKTGALIECAVALGALCKADVDDTTLAALQTYAAAIGLAFQVQDDILDITGDTVT 234 Query: 221 MGKNIGEDFRNGKPTLPVILAF 242 +GK G D K T P +L Sbjct: 235 LGKPQGSDLAQEKSTYPALLGL 256 >gi|330964913|gb|EGH65173.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 295 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 16/225 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSA 89 + ++Y + +GGKR+RP+L A L ++ ACA+E IH +L+H +DD Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLVACTLAE----- 142 LRRG+ + ++L GD L S AF ++ S++A L +V+ A Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSSRDAETRLQMVSTLAAAAGPAG 152 Query: 143 ---GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 G+ L S+ LD +Y+H + KT L A++ + +L +G + R AL+ Y Sbjct: 153 MVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASGQADQARLDALQVY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD + +GK G D KPT P +L Sbjct: 211 ARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGL 255 >gi|316931945|ref|YP_004106927.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1] gi|315599659|gb|ADU42194.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1] Length = 308 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 77/268 (28%), Positives = 120/268 (44%), Gaps = 25/268 (9%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDV---------VKYLIFSGGKRLRPMLTLATALM 56 D T +D E +L R+ SD M ++ ++Y GGKRLRP L + +A + Sbjct: 15 DSTAEDTEA----LLGRLLSDELMTDEIARPRRLMEAIRYSTLGGGKRLRPFLAVESAAV 70 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 D +L+ A+E IH +L+HDD+ +DDS LRRG+ + + T++L GD LL Sbjct: 71 FGIDRDAALLVGAALECIHCYSLIHDDLPAMDDSDLRRGRPTLHKAYDDATAILAGDALL 130 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAE-GELRQLSLSKNLDVTEE---------DYLHV 164 + AF +V + ++ LA L + + LD+ E D + Sbjct: 131 TFAFDIVTRDEVHTDPTVRLMLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVAKL 190 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KT L +++ +AL YG LG AFQ+ DD+LD + +GK Sbjct: 191 QQMKTGALLRYGCVAGAILGQANAEQYRALDDYGRALGEAFQIADDLLDVESDAEALGKP 250 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNF 252 G D GK T L +R ++ Sbjct: 251 AGADAALGKTTFVTQLGIDGAKQRLRDL 278 >gi|325697091|gb|EGD38978.1| geranyltranstransferase [Streptococcus sanguinis SK160] Length = 291 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 34/272 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEF 73 +F +++ SD + +V+ Y + +GGKR+RP+L L A LE + H +A A+E Sbjct: 16 DFYRSQQVSSD---LTEVILYSVQAGGKRIRPLLLLELIQAFGLEL-AEAHYQVAAALEM 71 Query: 74 IHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQ-- 127 IHT +L+HDD+ RRG++ + +G ++L GD L + ++ E SQ Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVK 131 Query: 128 -EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + LSL A + +GE + +SL D + +KT L + Sbjct: 132 VDLISELSLAAGSFGMVAGQVLDMQGEGQAISLG--------DLKTIHANKTGKLLTYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LI Q SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T P Sbjct: 184 VAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKK 269 L G KNF+ T+++ + + +L++ Sbjct: 244 AFL----GLDGAKNFFNHTLDEAVLILSDLEE 271 >gi|159041083|ref|YP_001540335.1| polyprenyl synthetase [Caldivirga maquilingensis IC-167] gi|157919918|gb|ABW01345.1| Polyprenyl synthetase [Caldivirga maquilingensis IC-167] Length = 299 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 3/198 (1%) Query: 20 LKRICSDVEMIPDV---VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 L + + V M P++ + I + GK +RP+LTL T L + V A A+E +H Sbjct: 22 LGNLLNGVNMPPNLRESAMHYIHNKGKMIRPLLTLITTHTLGGNLMDAVNPAIAVELVHV 81 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 ATLL DD++D +RRG +G + ++L D L+++A +++K++ L+ Sbjct: 82 ATLLQDDIIDGHLMRRGSETPFKRYGTEYTILASDLLIAKAIEYSLKSKTRRITMELTSA 141 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 A LA G+ +L N V Y+ +I++KTA L SAA+ + +A ++ L+S Sbjct: 142 ALRLAIGQSYELEYKLNGKVDMNIYMRIIENKTASLISAAIVLGGYVADADSNTINLLRS 201 Query: 197 YGMNLGIAFQLVDDVLDY 214 G LG A+Q+ DD++DY Sbjct: 202 LGEKLGAAYQIRDDIIDY 219 >gi|22536677|ref|NP_687528.1| geranyltranstransferase [Streptococcus agalactiae 2603V/R] gi|25010613|ref|NP_735008.1| hypothetical protein gbs0544 [Streptococcus agalactiae NEM316] gi|76787307|ref|YP_329231.1| geranyltranstransferase [Streptococcus agalactiae A909] gi|76799070|ref|ZP_00781262.1| geranyltranstransferase [Streptococcus agalactiae 18RS21] gi|77405325|ref|ZP_00782421.1| geranyltranstransferase [Streptococcus agalactiae H36B] gi|77412376|ref|ZP_00788686.1| geranyltranstransferase [Streptococcus agalactiae CJB111] gi|77414020|ref|ZP_00790192.1| geranyltranstransferase [Streptococcus agalactiae 515] gi|22533517|gb|AAM99400.1|AE014214_14 geranyltranstransferase, putative [Streptococcus agalactiae 2603V/R] gi|23094967|emb|CAD46188.1| Unknown [Streptococcus agalactiae NEM316] gi|76562364|gb|ABA44948.1| geranyltranstransferase [Streptococcus agalactiae A909] gi|76585585|gb|EAO62151.1| geranyltranstransferase [Streptococcus agalactiae 18RS21] gi|77159946|gb|EAO71085.1| geranyltranstransferase [Streptococcus agalactiae 515] gi|77161564|gb|EAO72565.1| geranyltranstransferase [Streptococcus agalactiae CJB111] gi|77176120|gb|EAO78893.1| geranyltranstransferase [Streptococcus agalactiae H36B] gi|319744560|gb|EFV96913.1| geranyltranstransferase [Streptococcus agalactiae ATCC 13813] Length = 290 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 75/254 (29%), Positives = 123/254 (48%), Gaps = 22/254 (8%) Query: 31 PDVVKYLIFS---GGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 PD++K +++S GGKR+RP + L +LE G D H +A A+E IHT +L+HDD Sbjct: 24 PDLIKAILYSVDGGGKRIRPRILLE---ILEGFGVELIDGHYDVAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLV 136 + +D+ RRG++ + T+VL GD L F +V++ + +E LS+ Sbjct: 81 LPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKAGFKADVTVRLIELLSMS 140 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A + + L + V D L +I +KT L + + ++A V+ L Sbjct: 141 AGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLAYPFVAAGILAEKSEEVKGKLH 200 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 G+ +G AFQ+ DD+LD E+GK +D K T P +L G + + Sbjct: 201 QAGLLIGHAFQVRDDILDVTASFEELGKTPNKDIVAEKTTYPNLL----GLDKSQEILDD 256 Query: 256 TINDGKISVENLKK 269 T+ + +NL+K Sbjct: 257 TLKKAQAIFQNLEK 270 >gi|325690177|gb|EGD32181.1| geranyltranstransferase [Streptococcus sanguinis SK115] Length = 291 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 82/271 (30%), Positives = 132/271 (48%), Gaps = 39/271 (14%) Query: 12 MEKVNFLIL-----KRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNH 64 +EK+ +I +++ SD + +V+ Y + +GGKR+RP+L L A LE + H Sbjct: 7 LEKIGLMIADFYKSQQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFDLELT-EAH 62 Query: 65 VLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +A A+E IHT +L+HDD+ RRG++ + +G ++L GD L + ++ Sbjct: 63 YQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLA 122 Query: 123 --ETKSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSK 168 E SQ + + LSL A + +GE + +SL ED + +K Sbjct: 123 RAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISL--------EDLKTIHANK 174 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 T L + + LIA V+ V+ L+ G LG+AFQ+ DD+LD E+GK +D Sbjct: 175 TGKLLTYPFVAAGLIAEVEYFVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKD 234 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 K T P L G KNF+ T+++ Sbjct: 235 LAAAKSTYPAFL----GLDGAKNFFNQTLDE 261 >gi|257865770|ref|ZP_05645423.1| geranyltranstransferase [Enterococcus casseliflavus EC30] gi|257872105|ref|ZP_05651758.1| geranyltranstransferase [Enterococcus casseliflavus EC10] gi|257799704|gb|EEV28756.1| geranyltranstransferase [Enterococcus casseliflavus EC30] gi|257806269|gb|EEV35091.1| geranyltranstransferase [Enterococcus casseliflavus EC10] Length = 295 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 124/242 (51%), Gaps = 14/242 (5%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA- 70 +E+V +K SD + + ++Y I +GGKR+RP+L AT ++ N + CA Sbjct: 12 IEEVMERFVKEHTSDRRLF-ESMQYSIQAGGKRIRPLLLAATVAAF-HKPINTAVYQCAA 69 Query: 71 -IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETK 125 +E +HT +L+HDD+ +D+ LRRGK V+G ++L GD LL+ AF +V E + Sbjct: 70 ALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAMAEIE 129 Query: 126 SQEA---LEALSLVACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + L+ LS A T + G+ + +N + E+ + + + KT L A+ Sbjct: 130 ANQKVLLLQQLSKAAGTQGMVAGQAADIQ-GENQALRLEELMSIHERKTGELIRFAVIAG 188 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A V L + ++G+AFQ+ DD+LD E+GK + D K T P +L Sbjct: 189 GVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGKVVRRDDELAKSTYPALL 248 Query: 241 AF 242 Sbjct: 249 GL 250 >gi|28867927|ref|NP_790546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str. DC3000] gi|213969291|ref|ZP_03397429.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1] gi|301381795|ref|ZP_07230213.1| geranyltranstransferase [Pseudomonas syringae pv. tomato Max13] gi|302061005|ref|ZP_07252546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato K40] gi|302130543|ref|ZP_07256533.1| geranyltranstransferase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851163|gb|AAO54241.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str. DC3000] gi|213925969|gb|EEB59526.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1] Length = 295 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 16/225 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSA 89 + ++Y + +GGKR+RP+L A L ++ ACA+E IH +L+H +DD Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLVACTLAE----- 142 LRRG+ + ++L GD L S AF ++ S+ A L +V+ A Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSSRNAATRLQMVSTLAAAAGPAG 152 Query: 143 ---GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 G+ L S+ LD +Y+H + KT L A++ + +L +G + R AL+ Y Sbjct: 153 MVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASGQADQARLDALQVY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD + +GK G D KPT P +L Sbjct: 211 ARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGL 255 >gi|217033116|ref|ZP_03438579.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128] gi|298736116|ref|YP_003728641.1| geranyltranstransferase IspA [Helicobacter pylori B8] gi|216945159|gb|EEC23852.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128] gi|298355305|emb|CBI66177.1| geranyltranstransferase (IspA) [Helicobacter pylori B8] Length = 303 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 79/273 (28%), Positives = 141/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + LV A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESHIIVELVKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G++N + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKNEELLKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ G+ FQ++DD++D + E GK D + K + +L ++ + Sbjct: 215 AFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLEKANDYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK A+ +++EN AL++T ++ Sbjct: 273 VLNDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|330686046|gb|EGG97669.1| geranyltranstransferase [Staphylococcus epidermidis VCU121] Length = 288 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 74/231 (32%), Positives = 123/231 (53%), Gaps = 14/231 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T ML + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 31 YSLNAGGKRIRPVLLLLTLDMLNEDYRQGMQSALALEMIHTYSLIHDDLPAMDNDDYRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVI------ETKSQEALEALSLVACTLA--EGE- 144 K+ V+G ++L GD LL +AF +V +TK + ++ L+ + L G+ Sbjct: 91 KLTNHKVYGEWKAILAGDALLPKAFELVSYDSALSDTKKVKVIQRLAFASGHLGMVGGQT 150 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L S K +D++ + +H ++KT L + A+ + IA L + +LG+ Sbjct: 151 LDMQSEDKAIDISTLESIH--RTKTGALLTFAIMSAVDIADTDEHTSAMLNEFSDHLGLM 208 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 FQ+ DD+LD G+ ++GK +G D N K T V L + G + + N+ ++ Sbjct: 209 FQIKDDLLDIYGDEQKLGKKVGSDLENDKSTY-VSLLNKGGAEDKLNYHRN 258 >gi|92112233|ref|YP_572161.1| farnesyl-diphosphate synthase [Chromohalobacter salexigens DSM 3043] gi|91795323|gb|ABE57462.1| farnesyl-diphosphate synthase [Chromohalobacter salexigens DSM 3043] Length = 285 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 11/255 (4%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 E+V I++R + ++Y + GGKRLRP+L A L A A+E Sbjct: 9 EQVLAGIVERAAPVSGELDAAMRYSVLGGGKRLRPILVYAAGHALGAEDKALDAPAAAVE 68 Query: 73 FIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE-- 128 IH +L+HDD+ +RRG+ + ++L GD L + AF ++ ET+ Sbjct: 69 LIHAYSLVHDDLPAMDDDDMRRGRPTVHRAYSEAMAILAGDALQTLAFEVLAETRHPRLG 128 Query: 129 -ALEALSLVAC--TLAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 + AL+ + +A G+ LS + LDV +H KT L AA+ + +L A Sbjct: 129 AMVRALANASGREGMAAGQALDLSAVGGRLDVDALATMH--GYKTGALIRAAVRLGALAA 186 Query: 185 GVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ R AL +Y +G+AFQ+ DD+LD G+ +GK G D KPT P +L Sbjct: 187 ADEDDPRVAALDTYAAAIGLAFQIQDDILDVAGDAATLGKATGADAARAKPTYPALLGLD 246 Query: 244 RGTKREKNFWKSTIN 258 + + ++ Sbjct: 247 GARAKARGLLDEALS 261 >gi|323352717|ref|ZP_08087687.1| geranyltranstransferase [Streptococcus sanguinis VMC66] gi|322121753|gb|EFX93499.1| geranyltranstransferase [Streptococcus sanguinis VMC66] Length = 291 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 79/262 (30%), Positives = 127/262 (48%), Gaps = 34/262 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEF 73 +F +++ SD + +V+ Y + +GGKR+RP+L L A LE + H +A A+E Sbjct: 16 DFYRSQQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLEL-AEAHYQVAAALEM 71 Query: 74 IHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQ-- 127 IHT +L+HDD+ RRG++ + +G ++L GD L + ++ E SQ Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVK 131 Query: 128 -EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + LSL + + +GE + +SL ED + +KT L + Sbjct: 132 VDLISELSLASGSFGMVAGQVLDMQGEGQAISL--------EDLKIIHANKTGKLLTYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LI Q SV+ L+ G LG+AFQ+ DD+LD E+GK +D K T P Sbjct: 184 VAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTIND 259 L G KNF+ T+++ Sbjct: 244 AFL----GLDGAKNFFNQTLDE 261 >gi|241663625|ref|YP_002981985.1| polyprenyl synthetase [Ralstonia pickettii 12D] gi|240865652|gb|ACS63313.1| Polyprenyl synthetase [Ralstonia pickettii 12D] Length = 303 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 21/227 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GKR+RP+L A + + ++CA+E IH +L+HDD+ L Sbjct: 36 AMRYATLGAGKRVRPLLAHAAGALGDASPAALDGVSCAVEMIHAYSLVHDDMPCMDDDDL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG+ + T++LVGD L +QAF ++ E + A LV GEL + S Sbjct: 96 RRGRPTVHRAYDEATALLVGDALQTQAFILLAELGAVSAPTRAQLV------GELARASG 149 Query: 151 S------KNLDVTE------EDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 S + +D+ +D L + + KT L A+L + +L AG+ + + + +Y Sbjct: 150 SLGMAGGQAIDLQSVGVALSQDALEAMHRMKTGALLRASLRMGALCAGLNAAALEHVDTY 209 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ+VDD+LD + +GK G+D N KPT IL + Sbjct: 210 AGAVGLAFQVVDDILDVTADTATLGKTAGKDEANDKPTYVSILGLDK 256 >gi|71041845|pdb|1WL1|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima H74a Mutant gi|71041846|pdb|1WL1|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima H74a Mutant Length = 299 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 96/164 (58%), Gaps = 5/164 (3%) Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D + RRGK ++G++ +V GD +L AF V E + + A V + Sbjct: 80 HDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVEEIGNNKLRRAFLNVIGKM 139 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +E EL + LS+ +T+E+YL +++ K+ LF AL++ +L+ G + + L + G+ Sbjct: 140 SEAELIE-QLSRYKPITKEEYLRIVEGKSGALFGLALQLPALLEG---ELGEDLYNLGVT 195 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G +Q+ DD++D+ G + ++GK+ D +NG + P++ A ++ Sbjct: 196 IGTIYQMFDDIMDFAG-MEKIGKDGFLDLKNGVASFPLVTAMEK 238 >gi|282916792|ref|ZP_06324550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139] gi|283770598|ref|ZP_06343490.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19] gi|282319279|gb|EFB49631.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139] gi|283460745|gb|EFC07835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19] Length = 293 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 123/217 (56%), Gaps = 13/217 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L L T L + + A A+E IHT +L+HDD+ +D+ RRG Sbjct: 36 YSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRG 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALSLVA--CTLAEGEL 145 K+ V+G T++L GD LL++AF ++ + + L+ LS+ + + G++ Sbjct: 96 KLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQM 155 Query: 146 RQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + S + +D+ + +H K+KT L + A+ ++ IA ++ ++ L+SY +LG+ Sbjct: 156 LDMQSEGQPIDLETLEMIH--KTKTGALLTFAVMSAADIANADDATKEHLESYSYHLGMM 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 214 FQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG 250 >gi|227488516|ref|ZP_03918832.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glucuronolyticum ATCC 51867] gi|227543121|ref|ZP_03973170.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091410|gb|EEI26722.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181109|gb|EEI62081.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glucuronolyticum ATCC 51866] Length = 358 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 77/243 (31%), Positives = 117/243 (48%), Gaps = 32/243 (13%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLACA-IEFIHTAT 78 I S V++ + + + SGGKR+RP+ A A + GD V AC+ +EFI Sbjct: 30 IGSHVDVASEALSDFVVSGGKRVRPLY--AWAGYVGGGGDESNTAVQRACSSLEFIQACA 87 Query: 79 LLHDDVVDDSALRRGK--VAARLV------------------WGNQTSVLVGDFLLSQAF 118 L+HDD++D S RRG V R+ +G ++L+GD L A Sbjct: 88 LIHDDIIDASDTRRGNPTVHRRMETYLRDYPGFSGPTERAAEFGTSVAILIGDLALVWAE 147 Query: 119 CMVIETKSQ-----EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VL 172 M +E+ + A A + + + G++ +S + +E+ V KTA Sbjct: 148 DMFMESGVELSDLMRARPAWNAMRAEVIGGQILDISAEAVGETSEDTARRVNIYKTASYT 207 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + L++ L+AGV +S +A YG NLGIAFQL DD+L G+ + GK G+D R G Sbjct: 208 ITRPLQIGGLLAGVDDSTLEAFAGYGRNLGIAFQLRDDLLGVFGDPSVTGKPAGDDLREG 267 Query: 233 KPT 235 K T Sbjct: 268 KRT 270 >gi|294651287|ref|ZP_06728611.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194] gi|292822816|gb|EFF81695.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194] Length = 303 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 26/250 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA L + A A+E IH +L HDD+ Sbjct: 34 EPLKAAVHHAVMLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ--------EALEA 132 +D+ LRRG+ +V+G T++L GD L S AF + + + Q + ++ Sbjct: 94 MDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILASRLFDEQGQGTDAAIVLKQVQI 153 Query: 133 LSLVACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNS 189 L+ + + G++ L K +D TE + +H ++KT L AA+ + ++ AG + Sbjct: 154 LATASSKMVAGQVLDLQAEGKQVDQTELENIH--RNKTGALIQAAIMMGAVTVFAGTDPA 211 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + + L+ +G +G+AFQ+ DD+LD +GK G+D + K T P ++ ++ Sbjct: 212 IPK-LRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAKT-- 268 Query: 250 KNFWKSTIND 259 + T++D Sbjct: 269 ---YAQTLHD 275 >gi|294085694|ref|YP_003552454.1| polyprenyl synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665269|gb|ADE40370.1| Polyprenyl synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 340 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 129/257 (50%), Gaps = 15/257 (5%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 ++++ I+ R+ D + D ++ GK LR + L+ A +L+ + + +IE Sbjct: 27 QRLHEFIVNRLPKDGTPLADAARHHFAKPGKMLRAKMALSAAKLLKIDQAAALHWSTSIE 86 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--- 129 +H A+L+HDD+ D +RRG+VA +G ++ +GD+L++ +F + E +Q A Sbjct: 87 VLHNASLIHDDICDGDKMRRGRVAVWAKYGRDVALTLGDWLIALSFELAAEA-AQRANTP 145 Query: 130 --LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ L+ T GE + S+ + + + YL + KTA L +A LE + +A + Sbjct: 146 MLVKILAKHMATTTAGEAAEFSIQSS--YSWDHYLRIAGDKTAPLLTAPLEGIAAMA-LH 202 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR--- 244 A+ SY +LG A+Q+ +D+L++R + + G D P ++L +R Sbjct: 203 GDAAGAIGSYFRHLGEAYQIANDILNFR--AGDGAADCGSDLARRAPNAVIVLYRERMEG 260 Query: 245 GTKREKNFW-KSTINDG 260 G + W K+ NDG Sbjct: 261 GEALAFDKWCKAGSNDG 277 >gi|149928102|ref|ZP_01916349.1| geranyltranstransferase [Limnobacter sp. MED105] gi|149823188|gb|EDM82425.1| geranyltranstransferase [Limnobacter sp. MED105] Length = 300 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 14/216 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKRLR ML A +E AC+IE +H +L+HDD+ +D+ L Sbjct: 40 AMEYALLDGGKRLRAMLVFAAGYAVETPTSQLNDAACSIEAMHAYSLVHDDLPSMDNDVL 99 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACT-----LAE 142 RRGK + +G ++L GD L + AF + E+ Q ++ ++ +A +A Sbjct: 100 RRGKPTCHVKFGEAFALLAGDALQTAAFQWLAESNQGSVQVRMQQIAALASAAGLQGMAA 159 Query: 143 GELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV-RQALKSYGMN 200 G+ L+ + K +D+ +H KT L +A++ + + ++V + L++Y Sbjct: 160 GQAIDLAHVGKPMDLQSLATMHA--RKTGDLITASVRMGYVSNATLSAVEKNGLEAYAHC 217 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 LG+A+Q++DD+LD + +GK G+D N KPT+ Sbjct: 218 LGLAYQVIDDILDVESTSDVLGKTSGKDALNNKPTM 253 >gi|331266229|ref|YP_004325859.1| farnesyl diphosphate synthase [Streptococcus oralis Uo5] gi|326682901|emb|CBZ00518.1| farnesyl diphosphate synthase [Streptococcus oralis Uo5] Length = 291 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 82/287 (28%), Positives = 135/287 (47%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + NF ++ S + + V Y I +GGKR+RP L L +L + Sbjct: 1 MKKQEKLALVESALENFYGDQQFASSLR---EAVLYSIHAGGKRIRPFLLLEVLESLHVT 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 R H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IR-PAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + ++ + SQ + + LSL + +L EGE + LSL E+ Sbjct: 117 PYALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L + +F T+N +E + + Sbjct: 229 KTPQKDLQAEKSTYPALLGLEEAI----DFCNETLNQAMAKLEEIAE 271 >gi|237797521|ref|ZP_04585982.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020371|gb|EGI00428.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 295 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 16/225 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D ++Y + +GGKR+RP+L A L + ACA+E IH +L+HDD+ Sbjct: 33 DAMRYSVMNGGKRVRPLLAYAACEALGGEARDADGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACTLAE----- 142 LRRG+ + ++L GD L S AF ++ S++A L +V+ A Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQMVSTLAAAAGPAG 152 Query: 143 ---GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 G+ L S+ LD +Y+H + KT L A++ + +L +G + R +L+ Y Sbjct: 153 MVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASGQADQPRLDSLQVY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD + +GK G D KPT P +L Sbjct: 211 ARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGL 255 >gi|299139494|ref|ZP_07032668.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8] gi|298598422|gb|EFI54586.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8] Length = 324 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 64/292 (21%) Query: 33 VVKYLIFSGGKRLRPMLTLATALML---------EYRGDNH----VLLACAIEFIHTATL 79 +++ F+GGKRLRP+L + A M+ E H LA A+E +HT +L Sbjct: 37 AMRHSTFAGGKRLRPILCMEAAKMVASTDFYPPEEAAPAGHPEGVANLAAALEMLHTYSL 96 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLV 136 +HDD+ +D+ LRRG+ +V+G T++L GD L + AF + EA+ A+ Sbjct: 97 IHDDLPALDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQTIASLPAPPEAVVAI--- 153 Query: 137 ACTLAEGELRQLSLS----------------------KNLDVTEE------DYLHVI-KS 167 LR++SLS + +D+ E D + I ++ Sbjct: 154 --------LRKISLSIGTGIGRWGDHDTGIAPGMIGGQVVDIESEGTKPTPDLVEAIHRA 205 Query: 168 KTAVLFSAALEVSSLIA----GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 KT L + ++ ++ G+ +S + ++++G G+AFQ+VDDVLD E+GK Sbjct: 206 KTGALITVSIVAGAIYGSSRHGLPSSYHERIRTFGEKAGLAFQIVDDVLDMTQSSEELGK 265 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 G+D K T P + G ++ K+ I D ++E A ++ Sbjct: 266 TAGKDTATDKATWPAVF----GIEQSKHDAAELIADAFAALEPFGDAATPLK 313 >gi|325123276|gb|ADY82799.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2] Length = 303 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 126/244 (51%), Gaps = 23/244 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA L A A+E IH +L HDD+ Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ--------EALEA 132 +D+ LRRG+ + +G T++L GD L S AF + + + Q + ++ Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQI 153 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSV 190 L+ + + G++ L ++ +T+++ ++ ++KT L AA+ + ++ +G ++ Sbjct: 154 LATASSKMVSGQVLDLQ-AEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAI 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ YG +G+AFQ++DD+LD +GK G+D + K T P ++ G ++ K Sbjct: 213 PK-LRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALM----GLEQAK 267 Query: 251 NFWK 254 ++ K Sbjct: 268 SYAK 271 >gi|317009586|gb|ADU80166.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Helicobacter pylori India7] Length = 303 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 143/273 (52%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + +++G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVVSGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ G+ FQ++DD++D + E GK D + K + +L ++ + + Sbjct: 215 AFGLKTGLCFQVLDDIIDVTQDEKESGKTTHLD--SAKNSFVNLLGLKKASGYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK A+ +++EN AL++T ++ Sbjct: 273 VLND----LNALKPAYPLLQENLNALLNTLFKG 301 >gi|146308855|ref|YP_001189320.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp] gi|145577056|gb|ABP86588.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp] Length = 295 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 71/232 (30%), Positives = 123/232 (53%), Gaps = 16/232 (6%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--D 82 ++++ + + ++Y + +GGKR+RP+L A L+ D ACA+E IH +L+H Sbjct: 26 AELQRLYEAMRYSVMNGGKRVRPLLVYAACEALDGNLDRADGAACAVELIHAYSLVHDDL 85 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEA------LEALS 134 +DD LRRG+ + +++L GD L S AF ++ + + Q+A ++ALS Sbjct: 86 PAMDDDDLRRGQPTTHKAFDEASAILAGDGLQSLAFEVLADRRRNPQDAEVRLQMIDALS 145 Query: 135 LVA--CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 A + G+ L S+ + LD + +H + KT L A++ + +L +G + + Sbjct: 146 SAAGPAGMVGGQAIDLGSVGQQLDQAALETMH--RHKTGALIEASVLLGALASGNADELS 203 Query: 192 -QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AL Y +G+AFQ+ DD+LD + +GK G+D N KPT P +L Sbjct: 204 LKALLQYARAVGLAFQVQDDILDVESDTATLGKTQGKDEANDKPTYPALLGL 255 >gi|324990647|gb|EGC22583.1| geranyltranstransferase [Streptococcus sanguinis SK353] Length = 291 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 82/271 (30%), Positives = 130/271 (47%), Gaps = 39/271 (14%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNH 64 LT++D K +++ SD + +V+ Y + +GGKR+RP+L L A LE + H Sbjct: 12 LTIEDFYKS-----QQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLEL-AEAH 62 Query: 65 VLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +A A+E IHT +L+HDD+ RRG++ + +G ++L GD L + ++ Sbjct: 63 YQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLA 122 Query: 123 --ETKSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSK 168 E SQ + + LSL A + +GE + +SL D + +K Sbjct: 123 RAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLG--------DLKTIHANK 174 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 T L + + LI Q SV+ L+ G LG+AFQ+ DD+LD E+GK +D Sbjct: 175 TGKLLTYPFVAAGLIVQAQQSVQDKLRRIGDLLGLAFQVRDDILDVTASFEELGKTPQKD 234 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 K T P L G KNF+ T+++ Sbjct: 235 LAAAKSTYPAFL----GLDGAKNFFNQTLDE 261 >gi|295693200|ref|YP_003601810.1| geranyltranstransferase [Lactobacillus crispatus ST1] gi|295031306|emb|CBL50785.1| Geranyltranstransferase [Lactobacillus crispatus ST1] Length = 289 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 10/255 (3%) Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAI 71 ++ + K + S+VE I ++ Y + +GGKRLRP+L LAT L + + + +AC I Sbjct: 15 IDDYLAKHLASEVEDQKISQIMAYSVMAGGKRLRPLLFLATLNALGRKIEEPEIRIACGI 74 Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQE 128 E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E +KS + Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSKSAK 134 Query: 129 ALEALSLVACT--LAEGELRQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIA 184 ++ ++ + G+ + + N V + +++ ++ KT L A++E++++ A Sbjct: 135 LVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTGCLIQASVEMAAVYA 194 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G + + L + G ++Q+ DD++D E GK +D GK +L + Sbjct: 195 GASDIEQVKLVDFAKIFGRSYQIYDDLVDVVETSAEAGKATHKDQAEGKNNTLTLLGIDQ 254 Query: 245 GTKREKNFWKSTIND 259 K + K +D Sbjct: 255 SRKELTDLIKQAQDD 269 >gi|269121046|ref|YP_003309223.1| polyprenyl synthetase [Sebaldella termitidis ATCC 33386] gi|268614924|gb|ACZ09292.1| Polyprenyl synthetase [Sebaldella termitidis ATCC 33386] Length = 290 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 17/254 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + + Y + +GGKRLRP+L A + A A+E IH+ +L+HDD+ + Sbjct: 28 ERLAESMIYSVMNGGKRLRPVLMYMIADIFNQDYSRIEDTAAALECIHSYSLVHDDLPAM 87 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 DD RRGK+ + T++L GD LL+ AF ++ ++ E ++++ + Sbjct: 88 DDDTYRRGKLTTHKKFDEATAILAGDALLTYAFYVISASEKIENSGKVNIIRILSDYSGI 147 Query: 146 RQLSLSKNLDVTEE------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + +D+ E D L I S KT L AA+E+ ++ ++ L Y Sbjct: 148 NGMVGGQYVDMESENKEISFDTLKYIHSHKTGKLLKAAVELPLEALAIEGKQKEVLLEYS 207 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-------TKREKN 251 +GIAFQ+ DD+LD G+ + GK D +N K T P + ++ T++ K Sbjct: 208 ELIGIAFQIKDDLLDIEGDFEKTGKE-SSDEKNNKTTYPKLFGLEKTKEILNDYTEKAKQ 266 Query: 252 FWKSTINDGKISVE 265 + + +I VE Sbjct: 267 LIRENFENAEILVE 280 >gi|319899404|ref|YP_004159501.1| geranyltranstransferase [Bartonella clarridgeiae 73] gi|319403372|emb|CBI76931.1| geranyltranstransferase [Bartonella clarridgeiae 73] Length = 301 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 113/220 (51%), Gaps = 11/220 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ + +++ + +GGKRLRP L + +A + + ++ + + A+E +H +L+HDD+ + Sbjct: 36 EILINAMRHGVLNGGKRLRPFLVIQSAAIFDIPPEHSLDIGVALECLHCYSLIHDDLPAL 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVACTLAEG 143 D+ LRRGK + + T++L G+ LL+ AF ++ E S + L+ Sbjct: 96 DNDTLRRGKPTVHVAFDEATAILAGNALLTFAFEIIAHKEAYSFSPKTKIDLITALTQAA 155 Query: 144 ELRQLSLSKNLDVTEED-------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L + + LD+ E + + + KTA L A + +++ ++ L S Sbjct: 156 GLGGMIGGQMLDLEAEKKPQDESATITLQQMKTAALMRFACQAGAIMGQASKTLTDKLAS 215 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +G +G+AFQL DD+LD + +GK G+D K TL Sbjct: 216 FGTQIGLAFQLTDDLLDLVSQTKILGKTAGKDQTANKATL 255 >gi|167645671|ref|YP_001683334.1| polyprenyl synthetase [Caulobacter sp. K31] gi|167348101|gb|ABZ70836.1| Polyprenyl synthetase [Caulobacter sp. K31] Length = 303 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 13/222 (5%) Query: 20 LKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L + V PD V+Y + + GKR RPM+TL A + + ACA E IH Sbjct: 28 LADLAPAVGSAPDRLVEAVRYCLLAPGKRFRPMVTLLAAAECGAPEGSALDAACAFEMIH 87 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 A+L+ DD+ +DD+ LRRG + T++L G LL+QA+ ++ + Sbjct: 88 AASLILDDLPAMDDAGLRRGLPTIHRAFDEATAILAGVGLLNQAYAVIAADQGLPGSLRA 147 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLH-------VIKSKTAVLFSAALEVSSLIAGV 186 L A L + D+ + D + + KT VL AA + +L+AG Sbjct: 148 ELTARAAHAVGFSGLIAGQARDLFDRDQIRDPAALERLNHEKTGVLIIAAAQGGALVAGA 207 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 + +A ++ ++G+AFQ+ DD++D +G GK++G+D Sbjct: 208 PEATVEAFGTFARHIGLAFQIRDDLIDAQGSAETAGKDVGKD 249 >gi|15790986|ref|NP_280810.1| putative isopentenyl pyrophosphate isomerase [Halobacterium sp. NRC-1] gi|169236734|ref|YP_001689934.1| multifunctional long-chain (E)-prenyl diphosphate synthase [Halobacterium salinarum R1] gi|10581569|gb|AAG20290.1| putative isopentenyl pyrophosphate isomerase [Halobacterium sp. NRC-1] gi|167727800|emb|CAP14588.1| putative multifunctional long-chain (E)-prenyl diphosphate synthase [Halobacterium salinarum R1] Length = 300 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 25/225 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTL----------------ATAL----MLEYRGDNHVLLACAI 71 D +++++ +GGKR+RP LT+ A A+ L G++ + A + Sbjct: 29 DQLEHVVLAGGKRVRPTLTVLVCEAAGGAVWTGAAEAAAVRENAALSAGGEDALDYAVGV 88 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H A+L+ DD++D S LRRG +A +G ++ D LL +AF + ++ A+E Sbjct: 89 ELVHNASLVVDDIIDRSELRRGSASAWAEYGYGPGIVASDGLLGEAFALF--SRDPRAME 146 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 ++ L EGE +L TE +Y+ + + KT LF AA E+ ++ A Sbjct: 147 CVTDSLVELGEGEAIELVARPE---TEREYMELARRKTGALFRAAAELGAIAADADGRAV 203 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + Y +G+AFQ+ DDVLD + + +GK G D +P++ Sbjct: 204 ERFGEYAERVGVAFQIRDDVLDATADSDALGKPAGVDEALDRPSI 248 >gi|146337687|ref|YP_001202735.1| putative geranyltranstransferase [Bradyrhizobium sp. ORS278] gi|146190493|emb|CAL74492.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Bradyrhizobium sp. ORS278] Length = 306 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 73/249 (29%), Positives = 117/249 (46%), Gaps = 18/249 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y GGKRLRP L + +A + ++ A+E IH +L+HDD+ +D+S LR Sbjct: 46 MRYSSLGGGKRLRPFLVVESAAVFGVPRRGALMAGAALECIHCYSLIHDDLPAMDNSDLR 105 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----------L 140 RG+ V+ + T++L GD LL+ AF ++ T+ + +A +A T + Sbjct: 106 RGRPTLHKVYDDATAILAGDALLTIAFDII--TRDEIHPDAGVRLALTRALARCAGVGGM 163 Query: 141 AEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A G++ L+ D D V + KT L +L+ + +AL YG Sbjct: 164 AGGQILDLAGEGRFGDRDPVDVARVQQMKTGALLRFGCIAGALLGQASAAEYKALDDYGR 223 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 LG AFQ+ DD+LD G+ +GK G D GK T L + +R ++ D Sbjct: 224 ALGEAFQIADDLLDVEGDAATLGKPAGADAELGKTTFVTQLGIEGAKQRVRDLLAR--GD 281 Query: 260 GKISVENLK 268 +S+ K Sbjct: 282 AALSIFGAK 290 >gi|42522155|ref|NP_967535.1| octaprenyl diphosphate synthase [Bdellovibrio bacteriovorus HD100] gi|39574686|emb|CAE78528.1| octaprenyl diphosphate synthase [Bdellovibrio bacteriovorus HD100] Length = 318 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 100/197 (50%), Gaps = 4/197 (2%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 +FSGGK R L + L +LL+ IEFIH A+LLHDD++D S LRRGK AA Sbjct: 30 LFSGGKGFRAKLIRMMSAHLGIEPKTELLLSQTIEFIHNASLLHDDLIDRSHLRRGKTAA 89 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 L + + +VL GD+LL++ + + + ++ + V L EGE Q S+ + VT Sbjct: 90 WLKYTPEYAVLAGDYLLARVMVNLSGHGNIKLVQYTAEVISDLLEGEWLQDSVVGDFFVT 149 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 E + KTA LF + + IA + L G LG FQ DD+LDY Sbjct: 150 MEQLDRIHNLKTASLFKWCIR-APFIAQERYDEELHNILSEMGTLLGQLFQRSDDLLDYD 208 Query: 216 GEVNEMGKNIGEDFRNG 232 N+ GK I D ++G Sbjct: 209 IR-NDEGKAILGDLKSG 224 >gi|256825427|ref|YP_003149387.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM 20547] gi|256688820|gb|ACV06622.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM 20547] Length = 362 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 78/231 (33%), Positives = 106/231 (45%), Gaps = 29/231 (12%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRGKVA 96 + GGKRLRP + D L A A+EF A LLHDDV+DDS RRG A Sbjct: 46 LMQGGKRLRPGFLTWGHVAAGGSADEATLQAATAMEFFQAAALLHDDVMDDSDTRRGTPA 105 Query: 97 ARLVW----------------GNQTSVLVGDFLL---SQAF--CMVIETKSQEALEALSL 135 A VW G ++L GD L AF C + A +L Sbjct: 106 AHRVWAQRHREHAFEGSPEDHGIAGAILAGDLCLVWADAAFTGCGWEPEQMLRARPTWNL 165 Query: 136 VACTLAEGE-LRQLSLSKNLDVTEEDYLH-----VIKSKTAVL-FSAALEVSSLIAGVQN 188 + L G+ L L+ ++ + + D H V++ K+A L + + AGV Sbjct: 166 MRTQLMAGQFLDILNAARPWETLDTDARHERVRRVMQYKSAKYSIEHPLLIGADAAGVDP 225 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + RQ L YG++LG+AFQL DDVL G+ + GK G+D R GK T V+ Sbjct: 226 TTRQHLSDYGLHLGLAFQLRDDVLGVYGDPSVTGKPAGDDLREGKRTALVV 276 >gi|323700415|ref|ZP_08112327.1| Polyprenyl synthetase [Desulfovibrio sp. ND132] gi|323460347|gb|EGB16212.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132] Length = 297 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 84/272 (30%), Positives = 139/272 (51%), Gaps = 29/272 (10%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y + +GGKRLRP+L LA +L D + A ++E IHT +L+HDD+ LR Sbjct: 35 MEYSLLAGGKRLRPVLVLAWNGLLGGDADKAMPFAASMECIHTYSLIHDDLPAMDDDDLR 94 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET------KSQEALEALSLVACTLAEGEL 145 RG+ + + T++L GD LL++AF ++ ET ++ L A++++A G + Sbjct: 95 RGRPSNHKQFDEATAILAGDGLLTEAFVLMTETCLVKGLPAERVLRAIAVLARAAGSGGM 154 Query: 146 -------RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 +L+ + + E +H +K T L +AA E +++AG S + +G Sbjct: 155 VGGQAVDMELTGRTGVPLDELKKMHAMK--TGALLTAACECGAILAGAAESDVDNARRFG 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+VDDVLD G+ +GK +G D GK T P +L G R K + ++ Sbjct: 213 RKIGVAFQIVDDVLDVVGDTATLGKPVGSDEAMGKTTYPSLL----GLDRSKTLAREYVD 268 Query: 259 DGKISVENLKKAFIIMRE-----NRALVDTEY 285 + ++ NL F +E R +VD Y Sbjct: 269 E---ALTNLSGYFGCEQEFLWQLARYIVDRVY 297 >gi|291401904|ref|XP_002717322.1| PREDICTED: COenzyme Q (ubiquinone) biosynthesis family member (coq-1)-like [Oryctolagus cuniculus] Length = 512 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 110/245 (44%), Gaps = 37/245 (15%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L +D++ + I K + + ++ +Y GK RP++ +A A + + Sbjct: 225 LGWRDLKGLYEDIRKELLISTAELKEMSEYYFDGKGKAFRPVIVVLMARACNIHHNNSRD 284 Query: 65 VL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD++ RRGK +WG + Sbjct: 285 VQASQRSIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKK-------------- 330 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 VIE L GE QL +N + YL KTA L + + + Sbjct: 331 -VIED---------------LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 374 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S++ V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ Sbjct: 375 VSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVL 434 Query: 240 LAFQR 244 A Q+ Sbjct: 435 FACQQ 439 >gi|331002440|ref|ZP_08325958.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410256|gb|EGG89690.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon 107 str. F0167] Length = 296 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 77/230 (33%), Positives = 112/230 (48%), Gaps = 21/230 (9%) Query: 38 IFSGGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRR 92 I +GGKRLRP++ + EYR + AIE IHT +L+HDD+ +D+ LRR Sbjct: 35 IKNGGKRLRPLIMFEIYRAVAGEEYREEIIAPFLAAIEMIHTFSLIHDDLPAMDNDRLRR 94 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTLAE--GEL 145 GK + +G ++L GD L QAF +I K Q+ L+ +S TLA G L Sbjct: 95 GKPTTWVSYGEDMAILAGDMLCVQAF-EIISKKMQDVDDINILKRMSKALYTLANATGAL 153 Query: 146 RQLSLSKNLDVT------EEDYL-HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + +DV ED L + + KT L A+ + ++AG + + LK G Sbjct: 154 GMIG-GQCVDVEYCGKRMSEDVLRYTYELKTGALLQASFVIGGILAGANDKETRLLKKAG 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +G AFQ+ DD LD + E+GK D +N K T I+ KR Sbjct: 213 SYIGEAFQIRDDYLDIVADEKELGKPTHSDEKNEKTTYVNIVGINESLKR 262 >gi|222110169|ref|YP_002552433.1| polyprenyl synthetase [Acidovorax ebreus TPSY] gi|221729613|gb|ACM32433.1| Polyprenyl synthetase [Acidovorax ebreus TPSY] Length = 306 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 113/223 (50%), Gaps = 10/223 (4%) Query: 23 ICSDVEM-IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 +C D + + ++Y + GGKRLRP+L LA + + ACA+E IH +L+H Sbjct: 36 VCPDAPAGLGEAMRYAVLDGGKRLRPLLVLAACEAVGGNAQAALRAACAVELIHAYSLVH 95 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEA-----L 133 DD+ +D+ +RRGK + +G ++L GD L + AF + E A++A L Sbjct: 96 DDMPCMDNDVMRRGKPTVHVPFGEARALLAGDALQALAFELLTPEDGVPPAMQARLCREL 155 Query: 134 SLVACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + A + + L S L ++E+ + + KT L A++ + ++ + Sbjct: 156 ARAAGADGMAGGQAIDLASVGLQLSEDQLRQMHRLKTGALLQASVVMGAVCGQTPEGTLR 215 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 AL YG +G+AFQ+VDDVLD + +GK G+D KPT Sbjct: 216 ALSDYGAAMGLAFQVVDDVLDVTQDSATLGKTAGKDAACDKPT 258 >gi|209551400|ref|YP_002283317.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537156|gb|ACI57091.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 304 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 14/236 (5%) Query: 15 VNFLILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++ L+L SD P+ ++ Y + +GGKRLRP L + +A +L + + A Sbjct: 23 LDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVESAALLGGDDEAARRVGAA 82 Query: 71 IEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E +H +L+HDD+ LRRGK + + T++L GD LL+ AF ++ ++ Sbjct: 83 LECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGDSLLTYAFDIIAAPETAL 142 Query: 129 A-LEALSLVACTLAEGELRQLSLSKNLDVTEE----DYLHVIK---SKTAVLFSAALEVS 180 A SLV L ++ + LD+ E D +I+ KT L A E Sbjct: 143 ADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAMKTGALIRFACEAG 202 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +LIA R+ L+++G +G+AFQL DD+LD + MGK G+D GK TL Sbjct: 203 ALIAASPPEDRRRLRAFGEKIGLAFQLADDILDLTSDTATMGKATGKDAARGKGTL 258 >gi|320197141|gb|EFW71758.1| geranyltranstransferase [Escherichia coli WV_060327] Length = 299 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 76/263 (28%), Positives = 129/263 (49%), Gaps = 16/263 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFDVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E D L I + KT L AA+ + +L AG + + L Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRNALPVLDKYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I+D Sbjct: 214 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----IDD 269 Query: 260 GKISVENLKKAFIIMRENRALVD 282 + S++ L + + AL D Sbjct: 270 ARQSLKQLTEQSLDTSALEALAD 292 >gi|325917351|ref|ZP_08179568.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325536438|gb|EGD08217.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937] Length = 287 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 28/228 (12%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +++ + GGKR+RP+L A+ + D A ++E IH +L+HDD+ +DD AL Sbjct: 30 AMRHAVLGGGKRMRPLLVYASGALFRAAEDLLDTPAVSVELIHAYSLVHDDLPAMDDDAL 89 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG+ + + T++L GD L ++AF ++ A + V+ L G L+ L+ Sbjct: 90 RRGQPTVHIAFDEATAILAGDALQTRAFELL----------ASAPVSAELRVGWLQHLAS 139 Query: 151 SK-----------NLDVTEE-DYLHVIKS----KTAVLFSAALEVSSLIAGVQNSVRQAL 194 + ++D T + LH ++ KT L AA+ + +L + +Q + Sbjct: 140 AAGAGGMCGGQALDIDATGQVQSLHALQRMHALKTGALIRAAVRMGALSGRAAPADQQRV 199 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + LG+AFQ+ DD+LD ++GK G+D K T P +L Sbjct: 200 DDFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSKSTYPALLGM 247 >gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 294 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 16/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L A L ++ ACA+E IH +L+HDD+ Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---------ETKSQ--EALEALSLVAC 138 LRRG+ + ++L GD L S AF ++ ET+ Q L A + A Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAG 152 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 + + S+ LD +Y+H + KT L A++ + +L +G + R AL+ Y Sbjct: 153 MVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASGQADQPRLDALQIY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 211 ARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|254502825|ref|ZP_05114976.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] gi|222438896|gb|EEE45575.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] Length = 301 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 21/271 (7%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S E + + +++ +GGKRLRP+L + A + D V CA+E IH +L+HDD+ Sbjct: 34 SRPERLINAMRHGALNGGKRLRPVLVMDAAGLFGRADDGVVQAGCALELIHCYSLVHDDL 93 Query: 85 VDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC---- 138 LRRG+ + + T++L GD LL+ AF VI ++ + L C Sbjct: 94 PAMDDDDLRRGQPTVHKAYDDATAILAGDALLTLAFD-VITDEAVHPEAGIRLRLCRELA 152 Query: 139 ------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +A G++ L S++ D +E + H+ KT L A +++ ++ + Sbjct: 153 RASGIGGMAGGQMLDLE-SEHRDRSEAEIRHLQSMKTGALLRYACRAGAILGDASDADVE 211 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L +G +G+AFQL DD+LD MGK G+D GK TL ++ R T+ E Sbjct: 212 RLTRFGEIIGLAFQLADDLLDVEASPEAMGKATGKDAEAGKATLVGLMGIDR-TRAELQA 270 Query: 253 WKSTIND------GKISVENLKKAFIIMREN 277 +D K + N +++ R N Sbjct: 271 LLEEAHDLMAPYGSKAAALNALADYVVTRSN 301 >gi|307325382|ref|ZP_07604584.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306888851|gb|EFN19835.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 365 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 3/208 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L +A V A A+E +H +LLHDD++D RR + V Sbjct: 72 GGKAVRPALALLSAEAAGAAPGAGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKV 131 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS-LVACT--LAEGELRQLSLSKNLDVT 157 G ++LVGD L + A +++E + +A A L A T L +G+ + +S VT Sbjct: 132 HGPAQAILVGDALFALANEILLELGTADAGRATRRLTAATRKLIDGQAQDISYEHRERVT 191 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E+ L + +KT L + A + +++ G + L+ YG +LG+AFQ VDD+L G+ Sbjct: 192 VEECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVDDLLGIWGD 251 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK D R K +LPV+ A G Sbjct: 252 PATTGKRTWSDLRQRKKSLPVVAALAAG 279 >gi|315425225|dbj|BAJ46894.1| polyprenyl synthetase [Candidatus Caldiarchaeum subterraneum] Length = 353 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 116/245 (47%), Gaps = 7/245 (2%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGKR RP LT+ L +LA E IH ATL+ DDV D S +RRG+ + Sbjct: 66 GGKRWRPALTVIVYEALGGGDPGIYILAAVPEIIHNATLIVDDVEDGSLMRRGEPCIHRI 125 Query: 101 WGNQTSVLVGD-FLLSQAFCMVIETKSQEA---LEALSLVACTLAEGELRQLSLSKNL-- 154 +G ++ G+ + A+ + A LE L+ G+ + + L Sbjct: 126 YGIDIAINAGNAYYYIPAYLAAKKLPKNMATLFLEKYVETMTRLSLGQTMDIVWHRGLVT 185 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 D+TEE YL + KT L A+E++++ AG + + + L +G +G AFQ+ DD L+ Sbjct: 186 DITEEHYLQMAAFKTGALSRFAVELAAIYAG-RGDLLEELGRFGEAVGTAFQIQDDYLNI 244 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274 G+ GK IG D GK TL + A + + + ++ + LK+A ++ Sbjct: 245 FGDEARYGKEIGGDITEGKYTLMTVYALTHLSSEKAKRLRQILHSHTSDKQELKEAINLI 304 Query: 275 RENRA 279 RE+ A Sbjct: 305 RESGA 309 >gi|308231691|ref|ZP_07413460.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu001] gi|308378784|ref|ZP_07483890.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu010] gi|308379930|ref|ZP_07488129.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu011] gi|308397859|ref|ZP_07492630.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu012] gi|308216330|gb|EFO75729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu001] gi|308359223|gb|EFP48074.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu010] gi|308363135|gb|EFP51986.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu011] gi|308366792|gb|EFP55643.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu012] Length = 333 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 28 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 87 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 88 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 146 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E YL V+ KT L +A+ ++ + ++G Sbjct: 147 AVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQ 206 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + G +G AF++ D++ G+ + G D TLP++ A RE+ Sbjct: 207 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYAL-----REQ 258 Query: 251 NFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 S + + G I +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 259 TPDTSRLRELLAGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 318 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 319 RALATLIDHAI 329 >gi|149184810|ref|ZP_01863128.1| Polyprenyl synthetase [Erythrobacter sp. SD-21] gi|148832130|gb|EDL50563.1| Polyprenyl synthetase [Erythrobacter sp. SD-21] Length = 296 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 116/221 (52%), Gaps = 12/221 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKR+RP+L ATA + D V CA+E IH +L+HDD+ Sbjct: 36 EAMRYAAIGGGKRVRPLLVCATAKLFGVDRDAAVAAGCAVEAIHAYSLIHDDLPCMDDDD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAEGELRQ- 147 LR GK V+ T+VL GD L + AF + + S + LVA TLA+ + Sbjct: 96 LRHGKPTLHKVYDEATAVLAGDCLHALAFDILTMPGISNDPFVRAELVA-TLAKASGHEG 154 Query: 148 LSLSKNLDVT--EEDY-----LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 ++ + +D+ EE+Y + + KT L +A++E+ +++ + R L++Y + Sbjct: 155 MAGGQMMDIVSDEEEYDIRQVTRLQQLKTGALLAASVEMGAVLGKLPPEGRTHLRAYARD 214 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +G+AFQ+ DD+LD G+ + GK + +D GK T ++ Sbjct: 215 IGLAFQIADDLLDVEGDETKAGKALRKDEGQGKQTFVTLMG 255 >gi|127513698|ref|YP_001094895.1| polyprenyl synthetase [Shewanella loihica PV-4] gi|126638993|gb|ABO24636.1| farnesyl-diphosphate synthase [Shewanella loihica PV-4] Length = 293 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 10/228 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKR+RP L A ML + A AIE IH +L+HDD+ +DD ALRRG+ Sbjct: 42 GGKRIRPFLVYAVGEMLGVPLERLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVH 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLVACTLAEGELRQLSLSKNLDVT 157 + + T++L GD L + AF ++ + + A + L++V + + +D+ Sbjct: 102 IAFNEATAILAGDALQTLAFEIISQEGGELSASQQLAMVRALAKASGYSGMCGGQAMDLN 161 Query: 158 EEDY---LHVIKS----KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 D L +K KT L A+E+ + A V + L ++ +G+AFQ+ DD Sbjct: 162 ATDRQIDLETLKRLHRLKTGALIRCAVELPIIAAKVTDEQASHLLTFADAIGLAFQVQDD 221 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 VLD E+GK G D + K T P +L K+ + ++ Sbjct: 222 VLDIIASTEELGKPQGSDCESNKSTYPKLLGLSGAQATAKSLIEDALS 269 >gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str. 2250] gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 295 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 16/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L A L ++ ACA+E IH +L+HDD+ Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---------ETKSQ--EALEALSLVAC 138 LRRG+ + ++L GD L S AF ++ ET+ Q L A + A Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAG 152 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 + + S+ LD +Y+H + KT L A++ + +L +G + R AL+ Y Sbjct: 153 MVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASGQADQPRLDALQIY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 211 ARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|254561671|ref|YP_003068766.1| geranyltranstransferase [Methylobacterium extorquens DM4] gi|254268949|emb|CAX24910.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Methylobacterium extorquens DM4] Length = 320 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 107/220 (48%), Gaps = 16/220 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + +++ + GGKRLRP L + TA ML D + +E +H +L+HDD+ Sbjct: 56 EAMRHAVLGGGKRLRPFLAIETARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDD 115 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALSLVACTLAEGELRQ 147 LRRGK + T++LVGD L + AF + + + Q A+ A ++ A G L Sbjct: 116 LRRGKPTVHKAYDEATAILVGDALQTLAFEVTADPRWQPDPAIRAELVLGLARASG-LGG 174 Query: 148 LSLSKNLDVTEE-----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + + LD++ E D L + KT + + ++E +L+ G R AL Sbjct: 175 MVGGQLLDLSAEGRFGPATMDIDDTLRMQAMKTGAILAFSVEAGALVGGANADERAALLR 234 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 YG LG AFQ+ DD+LD MGK G+D GK TL Sbjct: 235 YGKALGQAFQVADDILDREASPEAMGKATGKDKDAGKATL 274 >gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298484883|ref|ZP_07002982.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 295 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 16/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L A L ++ ACA+E IH +L+HDD+ Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---------ETKSQ--EALEALSLVAC 138 LRRG+ + ++L GD L S AF ++ ET+ Q L A + A Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAG 152 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 + + S+ LD +Y+H + KT L A++ + +L +G + R AL+ Y Sbjct: 153 MVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASGQADQPRLDALQIY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 211 ARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|229828869|ref|ZP_04454938.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM 14600] gi|229792032|gb|EEP28146.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM 14600] Length = 305 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 122/262 (46%), Gaps = 21/262 (8%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 LE+ TL + E + L R + I + + Y + S GKRLRP+L A + Sbjct: 15 LEERTL-EAEGIIRRFLPREEGYQKTIMEAMSYALMSPGKRLRPILMRECAACFDQTSPQ 73 Query: 64 HV-LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-- 118 + AIE IH +L+HDD+ +D+ LRRGK +G VL GD LL+ AF Sbjct: 74 ALPFFMAAIEMIHAYSLVHDDLPAMDNDLLRRGKPTTHARFGEAMGVLAGDALLNYAFET 133 Query: 119 -CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE----------DYLHVIKS 167 +ET SL+ G + + + +DV E D++H +K Sbjct: 134 ALQSLETDGTNPAVHKSLILLARKAG-IYGMIGGQVVDVESEHIQGMDKHRLDFIHELK- 191 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 T L AA+ + +L+ G S ++ +G+AFQ+ DD+LD G+ +GK +G Sbjct: 192 -TGALIEAAMCIGALLGGADESQLLTVEQAAAKIGLAFQIEDDILDITGDEKTIGKPVGS 250 Query: 228 DFRNGKPTLPVILAFQRGTKRE 249 D RN K T V A G +R+ Sbjct: 251 DERNHKVTY-VTFAGLEGARRD 271 >gi|311114488|ref|YP_003985709.1| putative bifunctional short chain isoprenyl diphosphate synthase [Gardnerella vaginalis ATCC 14019] gi|310945982|gb|ADP38686.1| probably bifunctional short chain isoprenyl diphosphate synthase [Gardnerella vaginalis ATCC 14019] Length = 366 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 156/331 (47%), Gaps = 29/331 (8%) Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFS--GGKRLRPMLTLAT--ALMLEYRGDNHVL- 66 ++ N L K + S + + DVVK I S GGKRLR L L A+ D Sbjct: 26 DQFNSLACKNLISSCDKTLKDVVKQAISSSEGGKRLRAYLALEAFDAVRGNCSKDTAYCA 85 Query: 67 ---LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDFLL 114 +ACA+E TA L+HDD++D+SALRRG+ +A G +++GD L Sbjct: 86 MLDVACALEVFQTAALVHDDIIDESALRRGRPSAYCALSKACNSKHIGIGLGLMLGDILA 145 Query: 115 SQAFCMVIET-----KSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEEDYLHVI 165 +Q+F + + QE L + + + G++ LS+ KN E ++V Sbjct: 146 TQSFDITRKACTNLRNPQEVLGEFANMQRNVGIGQVLDLSIEMMSLKNPKKLAESSINVF 205 Query: 166 KSKTAVLFS-AALEVSSLIAGV-QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 + KTA + A L + L AG+ +N + G LGIAFQ+ DD++D + GK Sbjct: 206 RWKTASYTTIAPLALGFLSAGLNKNYAIKLANDIGEPLGIAFQIADDLIDIVSDSAHTGK 265 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283 IG D R GK T+ + A + ++ F N + +++ + I ++ A+ + Sbjct: 266 PIGGDIREGKRTVLLADALDLSSSEDRLFLIDAYNSNNRNEDDVNRIINIFNQSGAISKS 325 Query: 284 EYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 + R ++ ++++ + S + KS++ V Sbjct: 326 KKRIHNLWVESQEKIDNSTLSEFGKSILNEV 356 >gi|15800151|ref|NP_286163.1| geranyltranstransferase [Escherichia coli O157:H7 EDL933] gi|15829729|ref|NP_308502.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai] gi|168749882|ref|ZP_02774904.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113] gi|168756962|ref|ZP_02781969.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401] gi|168761626|ref|ZP_02786633.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501] gi|168768371|ref|ZP_02793378.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486] gi|168776274|ref|ZP_02801281.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196] gi|168783286|ref|ZP_02808293.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076] gi|168786267|ref|ZP_02811274.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869] gi|168800303|ref|ZP_02825310.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508] gi|195938512|ref|ZP_03083894.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4024] gi|208807604|ref|ZP_03249941.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206] gi|208815942|ref|ZP_03257121.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045] gi|208822955|ref|ZP_03263273.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042] gi|209397720|ref|YP_002269066.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115] gi|217326244|ref|ZP_03442328.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588] gi|254791605|ref|YP_003076442.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359] gi|261223902|ref|ZP_05938183.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK2000] gi|261256384|ref|ZP_05948917.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK966] gi|291281328|ref|YP_003498146.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615] gi|12513277|gb|AAG54771.1|AE005221_8 geranyltranstransferase (farnesyldiphosphate synthase) [Escherichia coli O157:H7 str. EDL933] gi|13359932|dbj|BAB33898.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai] gi|187768276|gb|EDU32120.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196] gi|188015849|gb|EDU53971.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113] gi|188999339|gb|EDU68325.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076] gi|189356028|gb|EDU74447.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401] gi|189362401|gb|EDU80820.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486] gi|189367958|gb|EDU86374.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501] gi|189373540|gb|EDU91956.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869] gi|189377422|gb|EDU95838.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508] gi|208727405|gb|EDZ77006.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206] gi|208732590|gb|EDZ81278.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045] gi|208737148|gb|EDZ84832.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042] gi|209159120|gb|ACI36553.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115] gi|209744014|gb|ACI70314.1| geranyltranstransferase [Escherichia coli] gi|209744016|gb|ACI70315.1| geranyltranstransferase [Escherichia coli] gi|209744018|gb|ACI70316.1| geranyltranstransferase [Escherichia coli] gi|209744020|gb|ACI70317.1| geranyltranstransferase [Escherichia coli] gi|209744022|gb|ACI70318.1| geranyltranstransferase [Escherichia coli] gi|217322465|gb|EEC30889.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588] gi|254591005|gb|ACT70366.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359] gi|290761201|gb|ADD55162.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615] gi|320192835|gb|EFW67475.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC1212] gi|320638415|gb|EFX08129.1| geranyltranstransferase [Escherichia coli O157:H7 str. G5101] gi|320643795|gb|EFX12918.1| geranyltranstransferase [Escherichia coli O157:H- str. 493-89] gi|320649146|gb|EFX17724.1| geranyltranstransferase [Escherichia coli O157:H- str. H 2687] gi|320656039|gb|EFX23955.1| geranyltranstransferase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661189|gb|EFX28620.1| geranyltranstransferase [Escherichia coli O55:H7 str. USDA 5905] gi|320665165|gb|EFX32258.1| geranyltranstransferase [Escherichia coli O157:H7 str. LSU-61] gi|326341183|gb|EGD64975.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1044] gi|326346042|gb|EGD69781.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1125] Length = 299 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKAQDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + I AL D Sbjct: 268 DDARQSLKQLAEQSIDTSALEALAD 292 >gi|281204751|gb|EFA78946.1| trans-prenyltransferase [Polysphondylium pallidum PN500] Length = 902 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 113/215 (52%), Gaps = 18/215 (8%) Query: 42 GKRLRPMLTLATALMLE---YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GK+ RP + + +LE + ++ + LA E HTA+L+HDDV+D S RR + Sbjct: 76 GKKTRPTVIFLLSKILENEKTKSNSFLKLAMVAEMFHTASLIHDDVIDGSDTRRDEKTVN 135 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 ++ N+ ++ GDF+LS++ ++ ++ +++S V L +GEL QL + ++ Sbjct: 136 TLYSNRMAITGGDFILSKSMVILGSIRNVRVAKSMSNVLGDLVDGELLQL---QGNGLSF 192 Query: 159 EDYLHVIKSKTAVLFS------AALEVSSLIAGVQNSVRQALKS------YGMNLGIAFQ 206 E YL KT+ +FS A L + + +S++ K+ +G +GIAFQ Sbjct: 193 EKYLQKSYLKTSSMFSNCCKSVALLGIHDDDDDIGSSIKIDEKTVELCFQFGTYIGIAFQ 252 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++DD+LD+ + +GK D R G T PV+ A Sbjct: 253 IIDDLLDFTISSSSLGKPSLADLRLGIATAPVLFA 287 >gi|256843404|ref|ZP_05548892.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus 125-2-CHN] gi|293380304|ref|ZP_06626378.1| polyprenyl synthetase [Lactobacillus crispatus 214-1] gi|256614824|gb|EEU20025.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus 125-2-CHN] gi|290923119|gb|EFE00048.1| polyprenyl synthetase [Lactobacillus crispatus 214-1] Length = 289 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 128/255 (50%), Gaps = 10/255 (3%) Query: 15 VNFLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAI 71 ++ + K + S+VE I ++ Y + GGKRLRP+L LAT L + + + +AC I Sbjct: 15 IDDYLAKHLASEVEDQKISQIMAYSVMGGGKRLRPLLFLATLNALGRKIEEPEIRIACGI 74 Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQE 128 E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E +KS + Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSKSAK 134 Query: 129 ALEALSLVACT--LAEGELRQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIA 184 ++ ++ + G+ + + N V + +++ ++ KT L A++E++++ A Sbjct: 135 LVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTGCLIQASVEMAAVYA 194 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G + + L + G ++Q+ DD++D E GK +D GK +L + Sbjct: 195 GASDIEQVKLVDFAKIFGRSYQIYDDLVDVVETSAEAGKATHKDEAEGKNNTLTLLGIDQ 254 Query: 245 GTKREKNFWKSTIND 259 K + K +D Sbjct: 255 SRKELTDLIKQAQDD 269 >gi|170727812|ref|YP_001761838.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908] gi|169813159|gb|ACA87743.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908] Length = 293 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 75/240 (31%), Positives = 115/240 (47%), Gaps = 18/240 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +K+ GGKR+RP L A ML + A AIE IH +L+HDD+ +DD AL Sbjct: 34 AMKHGALIGGKRIRPFLVYAIGEMLNVPQEKLDAAAAAIECIHAYSLIHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFL-------LSQAFCMVIETKSQEALEALSLVA--CTLA 141 RRG+ + + T++L GD L LSQ + T++ + AL+ + + Sbjct: 94 RRGQPTVHVAFDEATAILAGDALQALAFDILSQPIDGLTPTQNLAMVRALAKASGYSGMC 153 Query: 142 EGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ L+ + K +D+ LH K KT L A+E+ + A + + L ++ Sbjct: 154 GGQAMDLNATDKQIDLATLTQLH--KLKTGALIRCAVELPMIAADLPKDEQALLMTFADA 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+AFQ+ DDV+D E+GK G D + K T P +L G K +S I D Sbjct: 212 VGLAFQVQDDVIDIISSTEELGKPQGSDCDSNKSTYPKLL----GLDGAKATAESLIQDA 267 >gi|146343288|ref|YP_001208336.1| geranylgeranyl pyrophosphate synthetase [Bradyrhizobium sp. ORS278] gi|8650415|gb|AAF78199.1|AF218415_1 geranylgeranyl synthase [Bradyrhizobium sp. ORS278] gi|146196094|emb|CAL80121.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (Farnesyltranstransferase) [Bradyrhizobium sp. ORS278] Length = 316 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 12/217 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 + + + +GGKR R ML LA L + + A AIE IH A+L+ DD+ +DD+ R Sbjct: 46 MSHAVLAGGKRYRGMLVLALGSDLGVPEEQLLSSAVAIETIHAASLVVDDLPCMDDARRR 105 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 R + A + +G T++L L+++A +V + Q + + S + TL+ Q Sbjct: 106 RSQPATHVAFGEATAILSSIALIARAMEVVARDR-QLSPASRSSIVDTLSHAIGPQALCG 164 Query: 152 KNLD-------VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 D TE+D +H + KT+ LF AA +L+A V + G LG+A Sbjct: 165 GQYDDLYPPYYATEQDLIHRYQRKTSALFVAAFRCPALLAEVDPETLLRIARAGQRLGVA 224 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ + +GK++G+D +G TL +L Sbjct: 225 FQIFDDLLDLTGDAHAIGKDVGQD--HGTVTLATLLG 259 >gi|308234849|ref|ZP_07665586.1| polyprenyl synthetase [Gardnerella vaginalis ATCC 14018] Length = 360 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 93/332 (28%), Positives = 156/332 (46%), Gaps = 31/332 (9%) Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFS--GGKRLRPMLTLAT--ALMLEYRGDNHVL- 66 ++ N L K + S + + DVVK I S GGKRLR L L A+ D Sbjct: 20 DQFNSLACKNLISSCDKTLKDVVKQAISSSEGGKRLRAYLALEAFDAVRGNCSKDTAYCA 79 Query: 67 ---LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDFLL 114 +ACA+E TA L+HDD++D+SALRRG+ +A G +++GD L Sbjct: 80 MLDVACALEVFQTAALVHDDIIDESALRRGRPSAYCALSKACNSKHIGIGLGLMLGDILA 139 Query: 115 SQAF------CMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDVTEEDYLHV 164 +Q+F C + QE L + + + G++ LS+ KN E ++V Sbjct: 140 TQSFDITRKACTNLRNP-QEVLGEFANMQRNVGIGQVLDLSIEMMSLKNPKKLAESSINV 198 Query: 165 IKSKTAVLFS-AALEVSSLIAGV-QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + KTA + A L + L AG+ +N + G LGIAFQ+ DD++D + G Sbjct: 199 FRWKTASYTTIAPLALGFLSAGLNKNYAIKLANDIGEPLGIAFQIADDLIDIVSDSAHTG 258 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282 K IG D R GK T+ + A + ++ F N + +++ + I ++ A+ Sbjct: 259 KPIGGDIREGKRTVLLADALDLSSSEDRLFLIDAYNSNNRNEDDVNRIINIFNQSGAISK 318 Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 ++ R ++ ++++ + S + KS++ V Sbjct: 319 SKKRIHNLWVESQEKIDNSTLSEFGKSILNEV 350 >gi|329908093|ref|ZP_08274828.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium IMCC9480] gi|327546763|gb|EGF31699.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium IMCC9480] Length = 294 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 121/221 (54%), Gaps = 11/221 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKR+RP+L A A + + N A A+E IH +L+HDD+ +DD AL Sbjct: 36 AMRYAVLDGGKRVRPLLVQAAAELFDAAPANVARAASAVEMIHAYSLVHDDMPCMDDDAL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLVA-----CTLAEG 143 RRGK + + T++LVGD L +QAF ++ ++ + A+ L L+A + G Sbjct: 96 RRGKPTVHVAYDEATALLVGDALQAQAFFVLAGMDIEPARAVAMLRLLADAAGSIGMCGG 155 Query: 144 ELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + L S+ +L + E + +H +K+ A+L ++ L + + AL++Y +G Sbjct: 156 QAIDLASVGMDLSLAELEQMHRLKTG-ALLRASVLLGAWCGTTPDAAATAALEAYAAAIG 214 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +AFQ++DDVLD + +GK G+D + KPT IL + Sbjct: 215 LAFQVIDDVLDATADSATLGKTAGKDAADHKPTYVSILGLE 255 >gi|158334022|ref|YP_001515194.1| polyprenyl synthetase [Acaryochloris marina MBIC11017] gi|158304263|gb|ABW25880.1| polyprenyl synthetase [Acaryochloris marina MBIC11017] Length = 298 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 10/220 (4%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK LRP L +AT + + A A+E IH A L+HDDV D+S R + Sbjct: 2 GKGLRPALCMATCQAFGGTEEQSLKSAVALEMIHNAFLVHDDVEDNSECRHRMPTLQAEQ 61 Query: 102 GNQTSVLVGDF-------LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN- 153 G +V +GD L+ + M+ +Q E + EG+ +L ++ Sbjct: 62 GVPIAVNIGDAMNALSLRLVRENIPMLGHQLTQRIYEEFEHLMLKSLEGQASELGWVRDN 121 Query: 154 -LDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 D+TE DYL +I +KT F + LIA +G +G AFQ+ DDV Sbjct: 122 RCDITEADYLQMILNKTCWYSFMHPCRIGGLIASKDTLDLDRFNKFGYFMGAAFQIQDDV 181 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L+ G+ ++ GK IG D GK TL ++ F++GT E++ Sbjct: 182 LNLVGDSHQYGKEIGGDIWEGKRTLMLVHLFKQGTPSERD 221 >gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str. B076] gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 295 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 16/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L A L ++ ACA+E IH +L+HDD+ Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---------ETKSQ--EALEALSLVAC 138 LRRG+ + ++L GD L S AF ++ ET+ Q L A + A Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAG 152 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 + + S+ LD +Y+H + KT L A++ + +L +G + R AL+ Y Sbjct: 153 MVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASGQADQPRLDALQIY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 211 ARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|163851951|ref|YP_001639994.1| polyprenyl synthetase [Methylobacterium extorquens PA1] gi|218530703|ref|YP_002421519.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4] gi|240139077|ref|YP_002963552.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Methylobacterium extorquens AM1] gi|163663556|gb|ABY30923.1| Polyprenyl synthetase [Methylobacterium extorquens PA1] gi|218523006|gb|ACK83591.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4] gi|240009049|gb|ACS40275.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Methylobacterium extorquens AM1] Length = 320 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 107/220 (48%), Gaps = 16/220 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + +++ + GGKRLRP L + TA ML D + +E +H +L+HDD+ Sbjct: 56 EAMRHAVLGGGKRLRPFLAIETARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDD 115 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALSLVACTLAEGELRQ 147 LRRGK + T++LVGD L + AF + + + Q A+ A ++ A G L Sbjct: 116 LRRGKPTVHKAYDEATAILVGDALQTLAFEVTADPRWQPDPAIRAELVLGLARASG-LGG 174 Query: 148 LSLSKNLDVTEE-----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + + LD++ E D L + KT + + ++E +L+ G R AL Sbjct: 175 MVGGQLLDLSAEGRFGPATMDIDDTLRMQAMKTGAILAFSVEAGALVGGANADERAALLR 234 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 YG LG AFQ+ DD+LD MGK G+D GK TL Sbjct: 235 YGKALGQAFQVADDILDREASPEAMGKATGKDKDAGKATL 274 >gi|123443361|ref|YP_001007335.1| geranyltranstransferase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090322|emb|CAL13188.1| geranyltranstransferase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 306 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 80/268 (29%), Positives = 128/268 (47%), Gaps = 24/268 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A AIE +H +L+HDD+ Sbjct: 41 EAMRYGAVLGGKRLRPYLVYATGQMFGLSLTSLDAPAAAIECVHAYSLIHDDLPAMDDDD 100 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG+ + +G ++L GD L + AF ++ E E + LS++A + Sbjct: 101 LRRGQPTCHVKFGEANAILAGDALQTLAFSILAEAPMPEVADKDRLSMIAELAYASGVAG 160 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG S R+AL Y Sbjct: 161 MCGGQALDLEAEARQITLDELERIHRHKTGALIRAAVRLGALAAGA--SGREALPLLDRY 218 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ +GK G D ++GK T P ++ + + ++ + Sbjct: 219 ANAIGLAFQVQDDILDVIGDTATIGKRQGSDQQHGKSTYPALMGLDCAKAKAIDLYQEAV 278 Query: 258 ND-GKISVENLKKA-------FIIMREN 277 + +S ++ A FII R+N Sbjct: 279 SALNALSAQSYNTAPLQALACFIIERDN 306 >gi|167968055|ref|ZP_02550332.1| polyprenyl synthetase [Mycobacterium tuberculosis H37Ra] Length = 331 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 26 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 85 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 86 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 144 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E YL V+ KT L +A+ ++ + ++G Sbjct: 145 AVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + G +G AF++ D++ G+ + G D TLP++ A RE+ Sbjct: 205 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYAL-----REQ 256 Query: 251 NFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 S + + G I +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 257 TPDTSRLRELLAGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 316 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 317 RALATLIDHAI 327 >gi|94986851|ref|YP_594784.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis PHE/MN1-00] gi|94731100|emb|CAJ54462.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis PHE/MN1-00] Length = 300 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 11/226 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 + Y + +GGKRLR +L +++A + + + + A IE IHT +L+HDD+ Sbjct: 39 AMNYSLLAGGKRLRAVLCISSAALFDLSPTSILPFAAGIEMIHTYSLIHDDLPAMDDDDF 98 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACT-----LA 141 RRGK + + ++L GD LL+ AF + S L A+ +A + Sbjct: 99 RRGKPSCHKAFNEALAILAGDALLTDAFTFMSTLNSIVPSNNILVAIHEIAQAAGSNGMV 158 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 +G+ + + DV+ + + KT LF A+ +++AG S ALK YG L Sbjct: 159 KGQSMDIEHTGVSDVSFNTLCIIHEYKTGALFRASCTTGAMLAGANESAIYALKCYGEAL 218 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 G AFQ+ DD+L+ + +GK D GK T P +L ++ K Sbjct: 219 GAAFQITDDILNVTADSITLGKPTRSDQEKGKITYPSLLGLEKSKK 264 >gi|325474098|gb|EGC77286.1| polyprenyl synthetase [Treponema denticola F0402] Length = 344 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 84/280 (30%), Positives = 142/280 (50%), Gaps = 29/280 (10%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 I + V+ L+ GGKR RP+L + + + E + L IEF HTA+L+HDD+ D S Sbjct: 47 IINPVRDLVKRGGKRWRPLLCVLSCELAEGDPEKAYPLTPLIEFCHTASLVHDDIEDKSD 106 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG AA + +G T++ +L +A +I + EA E++ +L LR+L Sbjct: 107 TRRGAPAAHIKYGLDTALNSASWLYFEALNPLI---NYEASESVRAEIYSLYSQNLRRLH 163 Query: 150 LSKNLDV----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG- 198 L +++D+ + ++Y+ +I KT L A E+ + AG + + L+ YG Sbjct: 164 LGQSMDIGWHSNPDIIPSVDEYITMISLKTGSLAKLAGELGFIAAG--KPINEVLE-YGK 220 Query: 199 --MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ---RGTKREKNFW 253 ++GI FQ++DDV + E N GK G+D GK +LP+I + G ++ K + Sbjct: 221 LMTDMGIGFQILDDVKNIT-EGN-AGKRRGDDIVEGKKSLPLIFYTEENPEGAEKIKLLF 278 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293 K +G I ++ + + ++A+ RA YG+K Sbjct: 279 KQAAKEG-IESPAVEASISAICSSKAV----KRAEDYGKK 313 >gi|194432565|ref|ZP_03064851.1| geranyltranstransferase [Shigella dysenteriae 1012] gi|194419126|gb|EDX35209.1| geranyltranstransferase [Shigella dysenteriae 1012] gi|332086043|gb|EGI91207.1| geranyltranstransferase [Shigella dysenteriae 155-74] gi|332094575|gb|EGI99621.1| geranyltranstransferase [Shigella boydii 5216-82] Length = 299 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 131/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ ++ E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDSDMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|26987266|ref|NP_742691.1| polyprenyl synthetase [Pseudomonas putida KT2440] gi|24981909|gb|AAN66155.1|AE016243_7 geranyltranstransferase [Pseudomonas putida KT2440] Length = 295 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 16/232 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 ++E + ++Y + +GGKR+RP+L A L + ACA+E IH +L+HDD+ Sbjct: 27 ELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLP 86 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV------- 136 LRRG+ + ++L GD L S AF +++ ++++ L Sbjct: 87 AMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLSPQIDSIRLAMVQVLAK 146 Query: 137 ---ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR- 191 + G+ L S+ + LD +++H + KT L A++ + +L + V+ Sbjct: 147 AAGPAGMVGGQAIDLGSVGQKLDQQALEFMH--RHKTGALIEASVRLGALASARAEPVQL 204 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AL++Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 205 DALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|15608129|ref|NP_215504.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv] gi|148660770|ref|YP_001282293.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis H37Ra] gi|2052123|emb|CAB08149.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis H37Rv] gi|148504922|gb|ABQ72731.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis H37Ra] Length = 325 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 20 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 79 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 80 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 138 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E YL V+ KT L +A+ ++ + ++G Sbjct: 139 AVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQ 198 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + G +G AF++ D++ G+ + G D TLP++ A RE+ Sbjct: 199 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYAL-----REQ 250 Query: 251 NFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 S + + G I +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 251 TPDTSRLRELLAGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 310 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 311 RALATLIDHAI 321 >gi|289744725|ref|ZP_06504103.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis 02_1987] gi|289685253|gb|EFD52741.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis 02_1987] Length = 325 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 20 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 79 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 80 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 138 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E YL V+ KT L +A+ ++ + ++G Sbjct: 139 AVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQ 198 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR---GTK 247 + + G +G AF++ D++ G+ + G D TLP++ A + T Sbjct: 199 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYALREQTPDTS 255 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 R + I+D +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 256 RMRELLAGPIHD-----DHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 310 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 311 RALATLIDHAV 321 >gi|215410588|ref|ZP_03419396.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis 94_M4241A] gi|298524483|ref|ZP_07011892.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494277|gb|EFI29571.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 325 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/308 (24%), Positives = 141/308 (45%), Gaps = 7/308 (2%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 20 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 79 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 80 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 138 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E YL V+ KT L +A+ ++ + ++G Sbjct: 139 AVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQ 198 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + G +G AF++ D++ G+ + G D TLP++ A + T Sbjct: 199 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYALREQTPDTS 255 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + G I +++ +A ++R + + + +Y +A++ L LPD +++L Sbjct: 256 RLRE--LLAGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDCQPRRAL 313 Query: 311 MEVVDFCL 318 ++D + Sbjct: 314 ATLIDHAV 321 >gi|163734437|ref|ZP_02141877.1| geranyltranstransferase [Roseobacter litoralis Och 149] gi|161392445|gb|EDQ16774.1| geranyltranstransferase [Roseobacter litoralis Och 149] Length = 289 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 119/245 (48%), Gaps = 26/245 (10%) Query: 22 RICSDVEMIPDVVKYLIF--SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 ++ ++ E +P +V+ + SGGKRLR L L TA + + + A AIE +H +L Sbjct: 19 KVLAEFEPLP-IVEAMAHATSGGKRLRGFLVLETARLHDIAAGEAIWSATAIEALHAYSL 77 Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----A 132 +HDD+ +RRG+ W + T+VL GD L + AF +V + + E A Sbjct: 78 VHDDLPCMDDDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASPSAEVRADLA 137 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLI 183 LSL + A+G + L + LD+ E + + + KT L + + + + Sbjct: 138 LSLARASGAQG----MVLGQALDIAAETAHTPLSLDEITRLQQGKTGALIGWSAQAGARL 193 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + ALK Y LG+AFQ+ DD+LD G+ ++GK +G+D GK T +L Sbjct: 194 AQADTA---ALKRYAQALGLAFQIADDILDVTGDSAQVGKAVGKDASAGKATFVSLLGLD 250 Query: 244 RGTKR 248 R Sbjct: 251 AARTR 255 >gi|215402805|ref|ZP_03414986.1| polyprenyl synthetase [Mycobacterium tuberculosis 02_1987] Length = 331 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 26 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 85 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 86 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 144 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E YL V+ KT L +A+ ++ + ++G Sbjct: 145 AVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR---GTK 247 + + G +G AF++ D++ G+ + G D TLP++ A + T Sbjct: 205 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYALREQTPDTS 261 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 R + I+D +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 262 RMRELLAGPIHD-----DHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 316 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 317 RALATLIDHAV 327 >gi|163749512|ref|ZP_02156760.1| geranyltranstransferase [Shewanella benthica KT99] gi|161330921|gb|EDQ01848.1| geranyltranstransferase [Shewanella benthica KT99] Length = 293 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 73/238 (30%), Positives = 112/238 (47%), Gaps = 14/238 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +K+ GGKR+RP L A ML A AIE +H +L+HDD+ +DD AL Sbjct: 34 AMKHGALLGGKRIRPFLVYAIGDMLSIPLKQLDSSAAAIECVHAYSLIHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVI-ETKSQEALEALSLVA-----CTLA 141 RRG+ + + ++L GD L + AF C I E ++ L + +A + Sbjct: 94 RRGQPTVHVAFDEAAAILAGDALQALAFEVMCEPIDEIAPRQNLAMVRALAKASGYSGMC 153 Query: 142 EGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ LS + K +D+ LH K KT L A+E+ + A V + L + Sbjct: 154 GGQAMDLSATNKPIDLATLSQLH--KLKTGALIRCAVELPMIAAQVSQEEQTLLMEFADA 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DDVLD +E+GK G D + K T P +L K+ + ++ Sbjct: 212 IGLAFQVQDDVLDIISSTDELGKPQGSDCESNKSTYPQLLGLMGAQATAKSLIEDALS 269 >gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 299 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 18/234 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKR+RP+L L + ACA+E IH +L+HDD+ +D+ Sbjct: 37 EAMRYSALGGGKRVRPVLVYGAGQALGVAPERLDGPACAVELIHVYSLIHDDLPAMDNDD 96 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--------ETKSQEALEALSLVACT-- 139 LRRGK + ++L GD + + AF ++ + +E L+ A + Sbjct: 97 LRRGKPTCHKAFDEAMAILAGDAMQALAFQILSMDPDMLDDPARRLRMMETLARAAGSRG 156 Query: 140 LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSY 197 +A G+ L S+ K LD+ + + +HV KT L A++ + +L A V + + L + Sbjct: 157 MAGGQAIDLGSVGKQLDIAQLEDMHV--HKTGALIRASVLLGALSAPEVDKAHLENLDRF 214 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--RGTKRE 249 +G+AFQ+ DD+LD G+ +GK G D KPT P ++ + R RE Sbjct: 215 AKCVGLAFQIRDDILDVEGDTATLGKTQGADQALNKPTYPALIGLEESRQAARE 268 >gi|332160732|ref|YP_004297309.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664962|gb|ADZ41606.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861141|emb|CBX71403.1| geranyltranstransferase [Yersinia enterocolitica W22703] Length = 306 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 24/268 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A AIE IH +L+HDD+ Sbjct: 41 EAMRYGAVLGGKRLRPYLVYATGQMFGLSLTSLDAPAAAIECIHAYSLIHDDLPAMDDDD 100 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG+ + +G ++L GD L + AF ++ E + + LS++A + Sbjct: 101 LRRGQPTCHVKFGEANAILAGDALQTLAFSILAEAPMPDVADKDRLSMIAELAHASGVAG 160 Query: 148 LSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D + + KT L AA+ + +L AG R+AL Y Sbjct: 161 MCGGQALDLAAESRQTTLDDLEKIHRHKTGALIRAAVRLGALAAGAPG--REALPLLDRY 218 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ +GK G D ++GK T P ++ + + ++ + Sbjct: 219 ANAIGLAFQVQDDILDVIGDTATIGKRQGSDQQHGKSTYPALMGLDCAKAKAIDLYQEAL 278 Query: 258 ND-GKISVENLKKA-------FIIMREN 277 + +S ++ A FII R+N Sbjct: 279 SALNALSAQSYNTAPLQALACFIIERDN 306 >gi|325661672|ref|ZP_08150295.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471925|gb|EGC75140.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium 4_1_37FAA] Length = 296 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 116/233 (49%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 ++I + ++Y + +GGKRLRPML T M AIE IHT +L+HDD+ Sbjct: 30 QVIMEAMEYSLMAGGKRLRPMLLWETFQMFGGAAKTVRPFMAAIEMIHTYSLVHDDLPAM 89 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEAL---EALSLVA-- 137 RRG+ +V+G +L GD LL+ AF C E +EA+ +AL ++A Sbjct: 90 DDDDYRRGRKTTHIVYGEDMGILAGDALLNYAFETACTAFEEAPEEAIRIGKALQVLAKK 149 Query: 138 ---CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G++ +S S ++TE+ + + KT L +A+ + +++AG + + Sbjct: 150 AGIYGMIGGQVVDVSASGK-NITEDILSFIYELKTGALLESAMMIGAILAGAEEEEVAVI 208 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + +GIAFQ+ DD+LD +GK + D +N K T + ++ K Sbjct: 209 EQVAKKIGIAFQIQDDILDVTSTEEVLGKPVFSDQKNEKTTYVTLFGLEKAKK 261 >gi|224437990|ref|ZP_03658929.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818] gi|313144436|ref|ZP_07806629.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818] gi|313129467|gb|EFR47084.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818] Length = 289 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 117/230 (50%), Gaps = 11/230 (4%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLL 67 L D E +I S + V ++ +GGKR RP L + L + N L Sbjct: 8 LHDFESFLLAQAPQIPSFHQHYEKAVWEMVQNGGKRFRPALVFSVLNALAPQLVKNAFLP 67 Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A +IE IHT +L+HDD+ +D+++LRRG +G ++LVGD L + AF ++ + + Sbjct: 68 ALSIECIHTYSLIHDDLPCMDNASLRRGHPTLHTKYGETLALLVGDGLNTYAFALLAQAR 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEE------DYLHVIKS-KTAVLFSAALE 178 L+ L+L+ + + L + LD E + L I + KTA L + +LE Sbjct: 128 LDSQLK-LALIESLAINAGIGGMVLGQMLDCEFENQALALEQLQTIHTNKTAKLIATSLE 186 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 ++IA + +R+AL +G+ LG+ FQL DD++D + ++ GK D Sbjct: 187 FGAIIANADSKLRKALYDFGLKLGVYFQLRDDIIDICQDSSQAGKTTQND 236 >gi|332531501|ref|ZP_08407403.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624] gi|332039053|gb|EGI75477.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624] Length = 313 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 17/233 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKRLRP+L LA + D + ACA E IH +L+HDD+ +D+ L Sbjct: 43 AMRYAVLDGGKRLRPLLVLAACEAVRGEADAALRAACATELIHAYSLVHDDMPCMDNDVL 102 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA--CTL-------- 140 RRGK + +G ++L GD L + AF ++ T E + + A C L Sbjct: 103 RRGKPTVHVQFGEAQALLAGDALQALAFELL--TPDDEVAVPVGMQARLCRLLARAAGSS 160 Query: 141 --AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 A G+ L+ S + + EE + + KT L A++ + + + + AL YG Sbjct: 161 GMAGGQAIDLA-SVGVKLDEERLRQMHRLKTGALLQASVMMGAACGHPTQAQQAALSDYG 219 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +G+AFQ+VDD+LD + +GK G+D KPT +L R + Sbjct: 220 AAIGLAFQVVDDILDVTADSATLGKTAGKDAVQDKPTYVSLLGLARAQAHARE 272 >gi|325957123|ref|YP_004292535.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC] gi|325333688|gb|ADZ07596.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC] gi|327183847|gb|AEA32294.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1118] Length = 289 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 121/242 (50%), Gaps = 8/242 (3%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV 84 D + I + Y + +GGKRLRP+L LAT L + + + +AC IE IHT +L+HDD+ Sbjct: 28 DSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRIACGIELIHTYSLIHDDL 87 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACT-- 139 +D+ RRGK+ + WG ++L GD LL + + + S E ++ ++ Sbjct: 88 PAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGSNSAELVKIITQAVGPNG 147 Query: 140 LAEGELRQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + G+ + + N V + D+++ ++ KT L A++E++++ A + + L Y Sbjct: 148 MVGGQYLDIDSTNNESVAGDADFINKMEWLKTGCLIQASVEMAAVYAKATDIEQVKLIDY 207 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G ++Q+ DD++D E GK +D GK +L + K ++ K Sbjct: 208 AKAFGRSYQIYDDLVDVVETSEEAGKATHKDQEEGKNNTLTLLGIDKSRKELRDLIKQAK 267 Query: 258 ND 259 +D Sbjct: 268 DD 269 >gi|257459231|ref|ZP_05624350.1| geranyltranstransferase [Campylobacter gracilis RM3268] gi|257443616|gb|EEV18740.1| geranyltranstransferase [Campylobacter gracilis RM3268] Length = 357 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 31/217 (14%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDV--VDDS 88 + + Y++ +GGK R L L + E R + + +A A+E IHT +L+HDD+ +DD+ Sbjct: 101 EALNYMLQAGGKHFRAQLLLGVVSTVDERRFEGALAIAMALEMIHTYSLIHDDLPAMDDA 160 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-------------IETKSQEALEALSL 135 LRRG+ + + T++LVGD L + AF + I+T ++ A + Sbjct: 161 DLRRGRPSLHKKYDEVTAILVGDALNTDAFLIAASANLSDEIKIKCIKTLARNAGSGGMV 220 Query: 136 VA----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + C L+Q +E ++LH+ KT L +AA E+ ++I G+++ + Sbjct: 221 LGQAIDCRFENSPLKQ---------SELEFLHL--HKTGALIAAAFELGAIIGGLKDELA 269 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 L G+ LG+ FQ+ DD++D G+ GK +G D Sbjct: 270 HELYKIGLKLGLIFQIEDDIIDATGDEASAGKPVGAD 306 >gi|170744677|ref|YP_001773332.1| polyprenyl synthetase [Methylobacterium sp. 4-46] gi|168198951|gb|ACA20898.1| Polyprenyl synthetase [Methylobacterium sp. 4-46] Length = 290 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 105/224 (46%), Gaps = 26/224 (11%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + GGKRLRP LT+ TA +L + IE +H +L+HDD+ L Sbjct: 27 AMRHAVLGGGKRLRPFLTIETARLLGGPYPGALAAGGGIELVHCYSLVHDDLPAMDDDDL 86 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--------------ALEALSLV 136 RRGK + T++L GD LL+ AF ++ + Q A +V Sbjct: 87 RRGKPTVHKAFDEATAILAGDALLTLAFELLADPAWQPDAGIRADLVLGLARAAGLGGMV 146 Query: 137 ACTL----AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L AEG + +L ++D T L + KT L + ++E +++ G R Sbjct: 147 GGQLLDLGAEGRFGEAAL--DVDAT----LQLQAMKTGALLAVSVEAGAIVGGADAEQRA 200 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 AL +YG LG AFQ+ DD+LD MGK G+D GK TL Sbjct: 201 ALLAYGRALGQAFQVADDILDREASAEAMGKRTGKDAAAGKATL 244 >gi|71066490|ref|YP_265217.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4] gi|71039475|gb|AAZ19783.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4] Length = 335 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 138/295 (46%), Gaps = 48/295 (16%) Query: 13 EKVNFLILKRICSDVEMI--------P--DVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 EK + + ++ D+E++ P D +Y++ GK +RP+L +A+A Y + Sbjct: 21 EKFHHDVRTQLAKDIEVLFSYAELPSPLLDACRYVMTGTGKLVRPLL-VASAFASTYSHN 79 Query: 63 NHVL---------------------LACAIEFIHTATLLHDDV--VDDSALRRGKVAARL 99 + + A A+E +HT +L+HDD+ +DD LRRG+ A + Sbjct: 80 DTIADKDNALATLLENDSDYDMSRRAALAVELLHTYSLVHDDLPCMDDDELRRGQPTAHI 139 Query: 100 VWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEA---------LSLVACTLAEGELRQLS 149 V+ T++L GD L + AF + E + ++ + A + G++ L+ Sbjct: 140 VFAEATALLAGDVLQTLAFEVLTAEMPTFAPFDSDIASQLFAIFAPRARRMVSGQMLDLN 199 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 +++ D + + KT L AA+ + + AG + R AL+ ++G+AFQ+ D Sbjct: 200 AEATTGISQSDLEAIHRDKTGALIEAAMLMGGICAGATATQRMALQECAQHIGLAFQVQD 259 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 D+LD + +GK G D + K T ++ G + ++ +S +DG+ ++ Sbjct: 260 DILDVTTSTDMLGKPAGSDEKLDKSTYVKLM----GVDKATSYAQSLFDDGRAAL 310 >gi|330505134|ref|YP_004382003.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01] gi|328919420|gb|AEB60251.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01] Length = 295 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 119/232 (51%), Gaps = 16/232 (6%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 +++E + ++Y + +GGKR+RP+L A LE + ACA+E IH +L+HDD+ Sbjct: 26 TELERLYQAMRYSVMNGGKRVRPLLVYAACEALEGDIERADGAACAVELIHAYSLVHDDL 85 Query: 85 VDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEALS 134 LRRG+ + +++L GD L S AF ++ + + + +E LS Sbjct: 86 PAMDDDDLRRGQPTTHKAFDEASAILAGDALQSLAFGVLADRRRNPQNTETRLQMVELLS 145 Query: 135 LVA--CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV- 190 A + G+ L S+ LD + +H + KT L A++ + +L +G + + Sbjct: 146 QAAGPAGMVGGQAIDLGSVGLQLDQQALEIMH--RHKTGALIEASVALGALASGNTDELA 203 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 R+AL Y +G+AFQ+ DD+LD + +GK G+D + KPT P +L Sbjct: 204 RKALLQYSRAIGLAFQVQDDILDVESDTATLGKTQGKDEAHDKPTYPALLGL 255 >gi|320181597|gb|EFW56512.1| geranyltranstransferase [Shigella boydii ATCC 9905] Length = 299 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 131/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPATAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ ++ E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDSDMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|31792180|ref|NP_854673.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97] gi|121636916|ref|YP_977139.1| putative polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822198|ref|YP_001286952.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis F11] gi|215429849|ref|ZP_03427768.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis EAS054] gi|215445137|ref|ZP_03431889.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T85] gi|218752659|ref|ZP_03531455.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis GM 1503] gi|224989388|ref|YP_002644075.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|253799983|ref|YP_003032984.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN 1435] gi|254363907|ref|ZP_04979953.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis str. Haarlem] gi|254549973|ref|ZP_05140420.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260200016|ref|ZP_05767507.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T46] gi|289442409|ref|ZP_06432153.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T46] gi|289555229|ref|ZP_06444439.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN 605] gi|289749517|ref|ZP_06508895.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T92] gi|289753047|ref|ZP_06512425.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis EAS054] gi|289757072|ref|ZP_06516450.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T85] gi|289761123|ref|ZP_06520501.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis GM 1503] gi|297633514|ref|ZP_06951294.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN 4207] gi|297730499|ref|ZP_06959617.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN R506] gi|313657828|ref|ZP_07814708.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN V2475] gi|31617768|emb|CAD93877.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL PYROPHOSPHATE SYNTHETASE) [Mycobacterium bovis AF2122/97] gi|121492563|emb|CAL71031.1| Probable polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134149421|gb|EBA41466.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis str. Haarlem] gi|148720725|gb|ABR05350.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis F11] gi|224772501|dbj|BAH25307.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321486|gb|ACT26089.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN 1435] gi|289415328|gb|EFD12568.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T46] gi|289439861|gb|EFD22354.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN 605] gi|289690104|gb|EFD57533.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T92] gi|289693634|gb|EFD61063.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis EAS054] gi|289708629|gb|EFD72645.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis GM 1503] gi|289712636|gb|EFD76648.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T85] gi|326904785|gb|EGE51718.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis W-148] gi|328459725|gb|AEB05148.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN 4207] Length = 325 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 20 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 79 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 80 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 138 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E YL V+ KT L +A+ ++ + ++G Sbjct: 139 AVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQ 198 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + G +G AF++ D++ G+ + G D TLP++ A RE+ Sbjct: 199 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYAL-----REQ 250 Query: 251 NFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 S + + G I +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 251 TPDTSRLRELLAGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 310 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 311 RALATLIDHAV 321 >gi|293610957|ref|ZP_06693256.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826609|gb|EFF84975.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 303 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 121/235 (51%), Gaps = 19/235 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA L A A+E IH +L HDD+ Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ--------EALEA 132 +D+ LRRG+ + +G T++L GD L S AF + + + Q + ++ Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQI 153 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSV 190 L+ + + G++ L ++ +T+++ ++ ++KT L AA+ + ++ +G ++ Sbjct: 154 LATASSKMVSGQVLDLQ-AEGKKITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAI 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + L+ YG +G+AFQ++DD+LD +GK G+D + K T P ++ ++ Sbjct: 213 PK-LRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQA 266 >gi|171742640|ref|ZP_02918447.1| hypothetical protein BIFDEN_01754 [Bifidobacterium dentium ATCC 27678] gi|171278254|gb|EDT45915.1| hypothetical protein BIFDEN_01754 [Bifidobacterium dentium ATCC 27678] Length = 391 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 26/222 (11%) Query: 41 GGKRLRPMLTL------ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 GGKRLR +LTL A E D + LACA+E TA L+HDD++DDS LRRG+ Sbjct: 83 GGKRLRALLTLDSFRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGR 142 Query: 95 VAARLVWGNQT---------SVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVACTL 140 +A + T +++GD L + + + ++S + + A + + Sbjct: 143 PSAHRALASGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREV 202 Query: 141 AEGELRQLSLSKN-LDVTEE---DYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQALK 195 G++ L++ N LD EE L+V + KTA + A LE L AG+ S + L Sbjct: 203 EIGQVLDLAVELNPLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLDASAARDLA 262 Query: 196 -SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 S G+ LG+AFQL DD+LD G GK +G D R GK T+ Sbjct: 263 MSIGLPLGLAFQLADDLLDVIGSSLNTGKPVGGDIREGKRTV 304 >gi|254231286|ref|ZP_04924613.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis C] gi|124600345|gb|EAY59355.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis C] Length = 333 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 28 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 87 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 88 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 146 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E YL V+ KT L +A+ ++ + ++G Sbjct: 147 AVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQ 206 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + G +G AF++ D++ G+ + G D TLP++ A RE+ Sbjct: 207 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYAL-----REQ 258 Query: 251 NFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 S + + G I +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 259 TPDTSRLRELLAGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 318 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 319 RALATLIDHAV 329 >gi|229592837|ref|YP_002874956.1| geranyltranstransferase [Pseudomonas fluorescens SBW25] gi|229364703|emb|CAY52662.1| geranyltranstransferase [Pseudomonas fluorescens SBW25] Length = 295 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 16/220 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L A L + ACA+E IH +L+HDD+ Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL---VACTLAEGELR 146 LRRG+ + ++L GD L S AF +++ L L A A G Sbjct: 93 LRRGQPTTHKAFDEAYAILAGDGLQSLAFSALLDPALSSVNAELRLRMVTALAHAAGPAG 152 Query: 147 QL--------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 + S+S LD +++H + KT L AA+ + +L +G + + ALK+Y Sbjct: 153 MVGGQAIDMGSVSLKLDQQALEHMH--RHKTGALIEAAVHLGALASGRAEAPQLAALKTY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +G+AFQ+ DD+LD + +GK G D KPT P Sbjct: 211 ALAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250 >gi|215426267|ref|ZP_03424186.1| polyprenyl synthetase [Mycobacterium tuberculosis T92] Length = 331 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 26 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 85 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 86 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 144 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E YL V+ KT L +A+ ++ + ++G Sbjct: 145 AVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQ 204 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + G +G AF++ D++ G+ + G D TLP++ A RE+ Sbjct: 205 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYAL-----REQ 256 Query: 251 NFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 S + + G I +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 257 TPDTSRLRELLAGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 316 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 317 RALATLIDHAV 327 >gi|21223617|ref|NP_629396.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)] gi|256785271|ref|ZP_05523702.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|289769163|ref|ZP_06528541.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|9968700|emb|CAC05969.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)] gi|289699362|gb|EFD66791.1| polyprenyl synthetase [Streptomyces lividans TK24] Length = 386 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 6/255 (2%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETKSQEAL 130 E +H TLLHDDV+D A RR + A V+G+ ++L GD L + A + + A Sbjct: 130 ELVHNFTLLHDDVMDRDATRRHRPTAWTVFGDADAILAGDALQALALRLFAADPHPASAA 189 Query: 131 EALSLVACT--LAEGELRQLSLSKNL--DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A L C L EG+ ++ + +VT ++ L + ++KT L A V +L AG Sbjct: 190 AATRLADCVMELCEGQHADTAMERRPPDEVTLDETLVMAEAKTGALLGCACAVGALYAGA 249 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +AL ++G G+AFQL+DDV+ G+ GK G D K +LPV+ A GT Sbjct: 250 ATEDVEALDAFGREAGMAFQLIDDVIGIWGDPRHTGKPAGADLAARKKSLPVVAALTSGT 309 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSS 305 + + E+L++ + + + +A +A L R +P+ Sbjct: 310 PAAAELAELYTGPYDENKEDLERTALAVERAGGRDWAQAQAADRMARAMQELARAVPEPE 369 Query: 306 WKKSLMEVVDFCLQR 320 L+ + +F +R Sbjct: 370 AAGGLLALAEFVTRR 384 >gi|290474684|ref|YP_003467564.1| geranyltranstransferase [Xenorhabdus bovienii SS-2004] gi|289173997|emb|CBJ80784.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Xenorhabdus bovienii SS-2004] Length = 305 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 12/229 (5%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKRLRP L + M ++ A A+E IH +L+HDD+ +D+ LRRG+ Sbjct: 49 GGKRLRPFLVYSVGEMFGLSRESLDAPALALECIHAYSLIHDDLPAMDNDDLRRGQPTCH 108 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQE-AL-EALSLVACTLAEGELRQLSLSKNLDV 156 + +G ++L GD L S AF ++ + AL + L++VA L + ++LD+ Sbjct: 109 IKFGESLAILAGDALQSLAFEILAKQDMPNIALSDRLAMVAELATASGLAGMCGGQSLDL 168 Query: 157 TEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLV 208 E + + KT L A+ + + AG + V L Y +G+AFQ+ Sbjct: 169 EAEGKQIDLATLEQIHRHKTGALICTAVRLGAYSAGQRGREVLPLLDQYSQAIGLAFQVH 228 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 DD+LD G + +GK G D + GK T P +L ++ K+ ++ ++ + Sbjct: 229 DDILDVIGNTDVIGKRQGNDQQLGKSTYPALLGLEQAKKKARDLYEEAL 277 >gi|271968156|ref|YP_003342352.1| geranylgeranyl pyrophosphate synthase-like protein [Streptosporangium roseum DSM 43021] gi|270511331|gb|ACZ89609.1| Geranylgeranyl pyrophosphate synthase-like protein [Streptosporangium roseum DSM 43021] Length = 346 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 3/215 (1%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +RP L L A ++ + A A+E H +LLHDDV+D RR + A V Sbjct: 61 GGKAIRPALVLLAAEVVGGGAAAALPAAVAVELAHNFSLLHDDVMDGDRTRRHRPTAWTV 120 Query: 101 WGNQTSVLVGDFLLSQAFCMVI---ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 +G ++L GD LL+ AF ++ + A S L EG+ ++ + DV Sbjct: 121 FGVSPAILAGDALLTLAFDVLAAGGHPATPRAARIFSAAIQELLEGQHTDVAFERRQDVE 180 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + L + KT L A + +L G + + L ++G +LG+AFQ VDD+L G+ Sbjct: 181 LAECLSMAAGKTGALLGCACALGALFGGGSLAQVEHLHAFGRDLGLAFQFVDDLLGIWGD 240 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 GK + D R+ K +LPV+ A T + Sbjct: 241 PEVTGKPVYSDLRSRKKSLPVVAALSSATPAGREL 275 >gi|315038641|ref|YP_004032209.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112] gi|312276774|gb|ADQ59414.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112] Length = 289 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 121/242 (50%), Gaps = 8/242 (3%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV 84 D + I + Y + +GGKRLRP+L LAT L + + + +AC IE IHT +L+HDD+ Sbjct: 28 DSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRIACGIELIHTYSLIHDDL 87 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACT-- 139 +D+ RRGK+ + WG ++L GD LL + + + S E ++ ++ Sbjct: 88 PAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGSNSAELVKIITQAVGPNG 147 Query: 140 LAEGELRQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + G+ + + N V + D+++ ++ KT L A++E++++ A + + L Y Sbjct: 148 MVGGQYLDIDSTNNESVAGDADFINKMEWLKTGCLIQASVEMAAVYAKATDIEQVKLIDY 207 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G ++Q+ DD++D E GK +D GK +L + K ++ K Sbjct: 208 AKAFGRSYQIYDDLVDVVETSEEAGKATHKDQEEGKNNTLTLLGIDKSRKELRDLIKQAK 267 Query: 258 ND 259 +D Sbjct: 268 DD 269 >gi|210135119|ref|YP_002301558.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12] gi|210133087|gb|ACJ08078.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12] Length = 303 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/273 (28%), Positives = 141/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ G+ FQ++DD++D + E GK D + K + +L +R + Sbjct: 215 AFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLERANDYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK A+ +++EN AL++T ++ Sbjct: 273 VLNDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|229552482|ref|ZP_04441207.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1] gi|258539852|ref|YP_003174351.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705] gi|229314219|gb|EEN80192.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1] gi|257151528|emb|CAR90500.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705] Length = 283 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 11/253 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y + +GGKRLRP+L L+ M + + A A+EF+HT +L+HDD+ +D+ L Sbjct: 31 AMAYSVDAGGKRLRPLLLLSIVAMYDGVVAEALPAATALEFVHTYSLIHDDLPAMDNDDL 90 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGELRQLS 149 RRG+ +G ++L GD LL+ AF ++ + ++ + ++A + G + Sbjct: 91 RRGQPTNHKQFGEALAILAGDALLTDAFAILSQHYPEKGAALVQILAEAAGSSGMVAGQV 150 Query: 150 LSKNLDVTEEDYL---HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 L + + T+ D + ++KT L A + + SL + + + AL + G+ FQ Sbjct: 151 LDMDGEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAIPEADQVALADFAAAFGLGFQ 210 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR--EKNFWKST--INDGKI 262 + DD+ D E+GK +D K T P +L G K+ F ++T +N + Sbjct: 211 IKDDINDVTKTTAELGKTADKDVAEHKNTFPELLGL-AGAKQALATQFQQATAALNSLTV 269 Query: 263 SVENLKKAFIIMR 275 +LK +++ Sbjct: 270 DAADLKSILAVLQ 282 >gi|218885233|ref|YP_002434554.1| polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756187|gb|ACL07086.1| Polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 313 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 25/236 (10%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y + +GGKR+RP+L L TA + + + A AIE IHT +L+HDD+ LR Sbjct: 39 MEYSLNAGGKRVRPVLCLTTAALFGLPTERVMPFAAAIEMIHTYSLIHDDLPAMDDDDLR 98 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVI------------ETKSQEALEALSLV--- 136 RGK + ++ T++L GD LL+ AF + E A+ A +++ Sbjct: 99 RGKPSNHKMFDEATAILAGDGLLTDAFDFMAGVGAGVGAAAGDENGGNAAIPAANVLAAL 158 Query: 137 --------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A + G+ + + VT E+ + KT L A+ +L+AG Sbjct: 159 RAVARAAGAPGMVGGQALDMEYTGRTGVTLEEMAAMHAMKTGALLRASCLSGALLAGADA 218 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + YG ++G AFQ+VDD+LD G+ E+GK +G D GK T P +L +R Sbjct: 219 DALARIADYGAHIGAAFQIVDDILDEVGDEAEIGKPVGSDAEQGKTTYPSLLGVER 274 >gi|297192159|ref|ZP_06909557.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC 25486] gi|197720196|gb|EDY64104.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC 25486] Length = 345 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 101/203 (49%), Gaps = 5/203 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L LA L V A A+E H TLLHDDV+D+ RR + A V+ Sbjct: 61 GKAVRPALVLAACQALGGDPRQAVRAAAAVELAHNFTLLHDDVIDEDPTRRHRPTAWSVF 120 Query: 102 GNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACT--LAEGELRQLSLSKN--LDV 156 G +++ GD + + A ++ E + A+ L AC L G+ + + L+V Sbjct: 121 GTADAIIAGDAMSALALRLLAEDRHPASGPAAVRLAACVIELCAGQQADCAFEERPPLEV 180 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T E+ L + +KT L A + +L AG A+ ++G G+AFQL+DD++ G Sbjct: 181 TLEECLAMATAKTGALLGCACALGALYAGADEEQAAAMDAFGREAGLAFQLIDDLIGIWG 240 Query: 217 EVNEMGKNIGEDFRNGKPTLPVI 239 + + GK G D K +LPV+ Sbjct: 241 DPEQTGKPAGADLAAHKKSLPVV 263 >gi|225024517|ref|ZP_03713709.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC 23834] gi|224942668|gb|EEG23877.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC 23834] Length = 295 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 18/234 (7%) Query: 18 LILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R+ +P ++Y + GGKRLRP+L LA A + + A+E Sbjct: 17 LVLERVLPAENSLPQRLHQAMRYAVLGGGKRLRPLLVLAAAELGQSEAAAAEAALAAVEL 76 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 +H +L+HDD+ +D+ +LRRGK + + T++LVGD L + AF ++ A Sbjct: 77 VHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTLAFDVLSRPNGLPAPR 136 Query: 132 ALSLV--------ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 L +V + +A G+ L S+ + + E + +H +K T L AA+ + +L Sbjct: 137 QLQMVHTLARASGSLGMAGGQAIDLQSVGQRIGQAELETMHRLK--TGALIRAAVALGAL 194 Query: 183 -IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + ++ L Y LG+AFQ++DDVLD + +GK G+D KPT Sbjct: 195 SCPDLDDAALARLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDQEADKPT 248 >gi|297380126|gb|ADI35013.1| Geranyltranstransferase [Helicobacter pylori v225d] Length = 303 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 142/273 (52%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D + K + +L ++ + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLEKANDYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK A+ +++EN AL++T ++ Sbjct: 273 VLNDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|283456281|ref|YP_003360845.1| polyprenyl synthase [Bifidobacterium dentium Bd1] gi|283102915|gb|ADB10021.1| idsA Polyprenyl synthase [Bifidobacterium dentium Bd1] Length = 359 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 26/222 (11%) Query: 41 GGKRLRPMLTL------ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 GGKRLR +LTL A E D + LACA+E TA L+HDD++DDS LRRG+ Sbjct: 51 GGKRLRALLTLDSFRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGR 110 Query: 95 VAARLVWGNQT---------SVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVACTL 140 +A + T +++GD L + + + ++S + + A + + Sbjct: 111 PSAHRALASGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREV 170 Query: 141 AEGELRQLSLSKN-LDVTEE---DYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQALK 195 G++ L++ N LD EE L+V + KTA + A LE L AG+ S + L Sbjct: 171 EIGQVLDLAVELNPLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLDASAARDLA 230 Query: 196 -SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 S G+ LG+AFQL DD+LD G GK +G D R GK T+ Sbjct: 231 MSIGLPLGLAFQLADDLLDVIGSSLNTGKPVGGDIREGKRTV 272 >gi|110640682|ref|YP_668410.1| geranyltranstransferase [Escherichia coli 536] gi|191173497|ref|ZP_03035024.1| geranyltranstransferase [Escherichia coli F11] gi|300997392|ref|ZP_07181732.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|110342274|gb|ABG68511.1| geranyltranstransferase [Escherichia coli 536] gi|190906206|gb|EDV65818.1| geranyltranstransferase [Escherichia coli F11] gi|300304211|gb|EFJ58731.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|324010681|gb|EGB79900.1| polyprenyl synthetase [Escherichia coli MS 60-1] Length = 299 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKRVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLTEQSLDTSALEALAD 292 >gi|291459864|ref|ZP_06599254.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417654|gb|EFE91373.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str. F0262] Length = 317 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 111/232 (47%), Gaps = 27/232 (11%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-------ACAIEFIHTATLLHD 82 + + + Y + SGGKRLRP+L L + + + + LL +E IH+ +L HD Sbjct: 34 VTEAMNYSLLSGGKRLRPILILESYELFSPKEERDRLLRPLLYAFMAGMEMIHSFSLCHD 93 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-ALSLVACT 139 D+ +D RRG+ + +G L GD L AF +V +T ++ L+ S A Sbjct: 94 DLPCMDGDRYRRGRKSTWYRYGEAMGTLAGDGLSLYAFQLVSKTAAEGFLKPGFSRYASD 153 Query: 140 LAEGELRQLSLSKNL----------------DVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E +R LS S + ++ EE+ L + + KTA L S AL + +L+ Sbjct: 154 VNEA-VRLLSSSAGIHGMLGGQAADVRKTGQEMGEEELLLIYERKTAALISGALSIGALL 212 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 AG L+ LG+AFQ+ DD+LD G E+GK I D N K T Sbjct: 213 AGASAESIALLREISKALGLAFQIRDDILDESGAEAELGKPIHSDRGNHKTT 264 >gi|119775569|ref|YP_928309.1| geranyltranstransferase [Shewanella amazonensis SB2B] gi|119768069|gb|ABM00640.1| farnesyl-diphosphate synthase [Shewanella amazonensis SB2B] Length = 293 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 111/214 (51%), Gaps = 14/214 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKR+RP L A +L LA A+E +H +L+HDD+ +DD LRRGK Sbjct: 42 GGKRIRPFLVYAVGELLGVDKAKLDRLAAAVECVHAYSLIHDDLPAMDDDNLRRGKPTVH 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGEL-----RQLSLS 151 + + T++L GD L + AF ++ E+ + A +A + A A G L + L L+ Sbjct: 102 IAFDEATAILAGDALQTLAFEIISESDAGLAPKAQVAMIAALARASGYLGMCGGQALDLA 161 Query: 152 ---KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 K++ + E LH +K T L AA+E++ + A ++ AL++Y +G+AFQ+ Sbjct: 162 GEGKSISLDELTRLHNLK--TGALIRAAVELALIAADASDADTAALRAYADAIGLAFQVQ 219 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 DD+LD E+GK G D K T P +L Sbjct: 220 DDILDITATTEEIGKPQGSDLDANKSTYPKLLGL 253 >gi|315652073|ref|ZP_07905074.1| geranyltranstransferase [Eubacterium saburreum DSM 3986] gi|315485720|gb|EFU76101.1| geranyltranstransferase [Eubacterium saburreum DSM 3986] Length = 297 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 82/259 (31%), Positives = 123/259 (47%), Gaps = 24/259 (9%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKY---LIFSGGKRLRPMLTLATALML---EYRGDNHV 65 + K+ LI ++ E+ +V+K I +GGKRLRP++ T + EY + Sbjct: 7 LSKIEKLIESFFYNEDELNKNVIKASNEAIRNGGKRLRPLIMFETYKAISGDEYSEEIIA 66 Query: 66 LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 AIE IHT +L+HDD+ +D+ LRRGK + +G ++L GD L QAF +I Sbjct: 67 PFLAAIEMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLSVQAF-EIIS 125 Query: 124 TKSQEA-----LEALSLVACTLAE---------GELRQLSLSKNLDVTEEDYLHVIKSKT 169 K QE L+ +S TLA G+ + S +TEE + KT Sbjct: 126 KKMQETDDFNILKRMSRAMYTLARATGAFGMIGGQCVDVEYSGK-KMTEEVMKYTYALKT 184 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 L +A+ V ++AG + + LK G +G AFQ+ DD LD + E+GK D Sbjct: 185 GALLAASFVVGGILAGASETEVRLLKKAGSYVGEAFQIRDDYLDIVADEKELGKPTHSDE 244 Query: 230 RNGKPTLPVILAFQRGTKR 248 +N K T I+ +R Sbjct: 245 KNLKITYVNIVGTDESLRR 263 >gi|330877558|gb|EGH11707.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 295 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 16/225 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSA 89 + ++Y + +GGKR+RP+L A L ++ ACA+E IH +L+H +DD Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLVACTLAE----- 142 LRRG+ + ++L GD L S AF ++ S++A L +V+ A Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLSSRDAETRLQMVSTLAAAAGPAG 152 Query: 143 ---GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 G+ L S+ LD +Y+H + KT L A++ + +L +G + R AL+ Y Sbjct: 153 MVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVWLGALASGQADQARLDALQVY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD + +GK G D KPT P +L Sbjct: 211 ARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGL 255 >gi|90420298|ref|ZP_01228206.1| putative geranyltranstransferase [Aurantimonas manganoxydans SI85-9A1] gi|90335632|gb|EAS49382.1| putative geranyltranstransferase [Aurantimonas manganoxydans SI85-9A1] Length = 300 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 113/217 (52%), Gaps = 11/217 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ GGKRLRP L + +A + + A A+E IH +L+HDD+ L Sbjct: 42 AMRHGALGGGKRLRPFLVIESARLFGADLQAAIGAATALECIHCYSLVHDDLPSMDDDDL 101 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEAL---SLVACTLAE 142 RRGK + T++L GD LL+ AF +V + K++ AL AL A + Sbjct: 102 RRGKPTVHRAYDEATAILAGDGLLTLAFGLVAGEEGLSPKARVALVALLARDAGAAGMVG 161 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G++ L+ ++N ++E++ + KT L + A E +++A + R L+ +G +G Sbjct: 162 GQVLDLA-AENAVLSEDEIARMQAMKTGALIAFACEAGAIVADAGAAERARLRRFGEIVG 220 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +AFQL DD+LD + +GK G+D GK TLP + Sbjct: 221 LAFQLADDLLDETADAAVLGKAAGKDRERGKKTLPAL 257 >gi|91209490|ref|YP_539476.1| geranyltranstransferase [Escherichia coli UTI89] gi|218557330|ref|YP_002390243.1| geranyltranstransferase [Escherichia coli S88] gi|237707585|ref|ZP_04538066.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA] gi|91071064|gb|ABE05945.1| geranyltranstransferase [Escherichia coli UTI89] gi|218364099|emb|CAR01764.1| geranyltranstransferase [Escherichia coli S88] gi|222032216|emb|CAP74955.1| Geranyltranstransferase [Escherichia coli LF82] gi|226898795|gb|EEH85054.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA] gi|294493422|gb|ADE92178.1| geranyltranstransferase [Escherichia coli IHE3034] gi|307628110|gb|ADN72414.1| geranyltranstransferase [Escherichia coli UM146] gi|312944998|gb|ADR25825.1| geranyltranstransferase [Escherichia coli O83:H1 str. NRG 857C] gi|315289864|gb|EFU49254.1| polyprenyl synthetase [Escherichia coli MS 110-3] gi|323952967|gb|EGB48835.1| polyprenyl synthetase [Escherichia coli H252] gi|323958614|gb|EGB54317.1| polyprenyl synthetase [Escherichia coli H263] Length = 299 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKRVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|7648574|gb|AAF65590.1|AF139916_11 GGPP synthase [Brevibacterium linens] Length = 385 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 27/228 (11%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGKV-- 95 +GGK +RP + L L R D H + ACA++ +H A ++HDDV+D+ +RRG+ Sbjct: 80 TGGKLIRPRMLLDAHAALGGR-DEHAAVDAACAMQLLHIALVIHDDVIDNDTIRRGEATI 138 Query: 96 ------------AARL---VWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSL 135 A R WG TS+L GD +L+ + ++ +TK + L+ Sbjct: 139 SGEFASEAMSRGALRRDANAWGIATSILGGDLILTLSHSLLARLDIEDTKRRAILDIFDD 198 Query: 136 VACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQA 193 A GE + LS +L+ D L ++ KTAV F A L +++++AG + + Sbjct: 199 TVVESAAGEHSDVWLSLHLEGANSPDVLAMVDQKTAVYSFQAPLLIAAVLAGADSGLIDD 258 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L + +G+ +QL DDVL G+ E GK+ D R GK TL + A Sbjct: 259 LANISRQIGVIYQLRDDVLGLFGDERETGKSNVSDLREGKETLLITFA 306 >gi|333008616|gb|EGK28084.1| geranyltranstransferase [Shigella flexneri VA-6] Length = 299 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii] Length = 360 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 122/229 (53%), Gaps = 15/229 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 MI + ++Y + +GGKR+RPML +A ++ + ACA+E IHT +L+HDD+ +D Sbjct: 95 MIHESMRYSLLAGGKRIRPMLCIAACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMD 154 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVA----CTLA 141 + LRRGK ++G +VL GD LL+ AF + TK + + ++ C A Sbjct: 155 NDDLRRGKPTNHKIYGEDVAVLAGDALLALAFEHIATHTKGVSSDRIVRVIGELAKCIGA 214 Query: 142 EGELRQLSLS------KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 EG + + ++D+ +++H+ KTA L ++ + +++ G + + L+ Sbjct: 215 EGLVAGQVVDIISEGISDVDLKHLEFIHL--HKTAALLEGSVVLGAILGGAPDEDVEKLR 272 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + +G+ FQ+VDD+LD ++GK G+D K T P ++ ++ Sbjct: 273 KFARCIGLLFQVVDDILDVTKSSQQLGKTAGKDLVADKVTYPKLIGIEK 321 >gi|284032149|ref|YP_003382080.1| polyprenyl synthetase [Kribbella flavida DSM 17836] gi|283811442|gb|ADB33281.1| Polyprenyl synthetase [Kribbella flavida DSM 17836] Length = 368 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 91/178 (51%), Gaps = 3/178 (1%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---ETKSQE 128 E +H +LLHDDV+D RR + A V+G ++L GD LLS AF +++ E + + Sbjct: 114 ELVHNFSLLHDDVMDCDTTRRHRATAWTVFGLGPAILAGDALLSLAFDVLVSSGEPAADD 173 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + L L EG+L DVT + L + + KT L + + ++ G ++ Sbjct: 174 GAKVLGQAVQELVEGQLADAHFEIRNDVTLSECLRMAQLKTGALLGCSTALGAMFGGGRS 233 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 L+ +G +LG+A+Q VDD+L G+ GK + D R K +LPVI A GT Sbjct: 234 EQVDHLRLFGEDLGLAYQYVDDLLGIWGDPRVTGKPVHSDLRRRKKSLPVIAALTSGT 291 >gi|46015525|pdb|1RQI|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Dimethylallyl S- Thiolodiphosphate gi|46015526|pdb|1RQI|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Dimethylallyl S- Thiolodiphosphate Length = 300 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 35 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 95 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 154 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 155 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 212 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 213 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 268 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 269 DDARQSLKQLAEQSLDTSALEALAD 293 >gi|319409361|emb|CBI83005.1| geranyltranstransferase [Bartonella schoenbuchensis R1] Length = 300 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 10/231 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ +++ +GGKRLRP L + +A + + + + + A+E +H +L+HDD+ + Sbjct: 36 EILIKAMRHGTLNGGKRLRPFLVIQSAALFDIPLEQSLDIGVALECVHCYSLIHDDLPAM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-------CMVIETKSQEALEALSLVAC 138 D+ LRRGK + T++L G+ LL+ AF C + + + AL+ A Sbjct: 96 DNDTLRRGKPTVHKAFNEATAILAGNALLTLAFEIIAHKACALSPQIRIDLITALAQAAG 155 Query: 139 TLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + L L ++N + + KTA L S A + ++I + L ++ Sbjct: 156 LGGMLGGQMLDLEAENKPQDHHAIITLQHMKTAALISFACQAGAIIGNASKTQIDQLSTF 215 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 G +LG+AFQL DD+LD +GK G+D K TL + ++ K+ Sbjct: 216 GTHLGLAFQLTDDLLDVTMSTKTLGKTAGKDKEANKATLVSLYGIEKTQKK 266 >gi|157155867|ref|YP_001461603.1| geranyltranstransferase [Escherichia coli E24377A] gi|157159942|ref|YP_001457260.1| geranyltranstransferase [Escherichia coli HS] gi|193065191|ref|ZP_03046264.1| geranyltranstransferase [Escherichia coli E22] gi|193068605|ref|ZP_03049566.1| geranyltranstransferase [Escherichia coli E110019] gi|194428795|ref|ZP_03061330.1| geranyltranstransferase [Escherichia coli B171] gi|218552984|ref|YP_002385897.1| geranyltranstransferase [Escherichia coli IAI1] gi|218693881|ref|YP_002401548.1| geranyltranstransferase [Escherichia coli 55989] gi|260842619|ref|YP_003220397.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009] gi|260853641|ref|YP_003227532.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368] gi|260866579|ref|YP_003232981.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128] gi|300818254|ref|ZP_07098465.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300820340|ref|ZP_07100492.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300903314|ref|ZP_07121242.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300924142|ref|ZP_07140134.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|301301569|ref|ZP_07207704.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|301330717|ref|ZP_07223319.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|307312204|ref|ZP_07591840.1| Polyprenyl synthetase [Escherichia coli W] gi|331666770|ref|ZP_08367644.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA271] gi|331676088|ref|ZP_08376800.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H591] gi|157065622|gb|ABV04877.1| geranyltranstransferase [Escherichia coli HS] gi|157077897|gb|ABV17605.1| geranyltranstransferase [Escherichia coli E24377A] gi|192927165|gb|EDV81786.1| geranyltranstransferase [Escherichia coli E22] gi|192957968|gb|EDV88410.1| geranyltranstransferase [Escherichia coli E110019] gi|194413098|gb|EDX29385.1| geranyltranstransferase [Escherichia coli B171] gi|218350613|emb|CAU96305.1| geranyltranstransferase [Escherichia coli 55989] gi|218359752|emb|CAQ97293.1| geranyltranstransferase [Escherichia coli IAI1] gi|257752290|dbj|BAI23792.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368] gi|257757766|dbj|BAI29263.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009] gi|257762935|dbj|BAI34430.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128] gi|300404609|gb|EFJ88147.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300419595|gb|EFK02906.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|300527125|gb|EFK48194.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300529145|gb|EFK50207.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300843066|gb|EFK70826.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|300843378|gb|EFK71138.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|306907706|gb|EFN38208.1| Polyprenyl synthetase [Escherichia coli W] gi|315059698|gb|ADT74025.1| geranyltranstransferase [Escherichia coli W] gi|315256246|gb|EFU36214.1| polyprenyl synthetase [Escherichia coli MS 85-1] gi|323152111|gb|EFZ38404.1| geranyltranstransferase [Escherichia coli EPECa14] gi|323160472|gb|EFZ46420.1| geranyltranstransferase [Escherichia coli E128010] gi|323178316|gb|EFZ63894.1| geranyltranstransferase [Escherichia coli 1180] gi|323379736|gb|ADX52004.1| Polyprenyl synthetase [Escherichia coli KO11] gi|323945322|gb|EGB41378.1| polyprenyl synthetase [Escherichia coli H120] gi|324116905|gb|EGC10818.1| polyprenyl synthetase [Escherichia coli E1167] gi|331065994|gb|EGI37878.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA271] gi|331076146|gb|EGI47428.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H591] gi|333010863|gb|EGK30289.1| geranyltranstransferase [Shigella flexneri K-272] gi|333021362|gb|EGK40615.1| geranyltranstransferase [Shigella flexneri K-227] Length = 299 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|308182415|ref|YP_003926542.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori PeCan4] gi|308064600|gb|ADO06492.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori PeCan4] Length = 307 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 97/169 (57%), Gaps = 7/169 (4%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + +K Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL--SKMG 120 Query: 128 EAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 E++ + LS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 121 ESIAQTLSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILL-- 178 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 N + +G+N G+AFQ++DD+LD + +GK DF+ GK T Sbjct: 179 -NKDAKIYADFGLNFGMAFQIIDDLLDITQDAKTLGKPNFSDFKEGKTT 226 >gi|294995177|ref|ZP_06800868.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis 210] Length = 325 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 142/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 20 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 79 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 80 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 138 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E YL V+ KT L A+ ++ + ++G Sbjct: 139 AVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIGASGQLGAALSGAAEEQ 198 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + G +G AF++ D++ G+ + G D TLP++ A RE+ Sbjct: 199 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYAL-----REQ 250 Query: 251 NFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 S + + G I +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 251 TPDTSRLRELLAGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 310 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 311 RALATLIDHAV 321 >gi|156932566|ref|YP_001436482.1| hypothetical protein ESA_00347 [Cronobacter sakazakii ATCC BAA-894] gi|112702897|emb|CAL34117.1| geranylgeranyl pyrophosphate synthase CRTE [Cronobacter sakazakii] gi|156530820|gb|ABU75646.1| hypothetical protein ESA_00347 [Cronobacter sakazakii ATCC BAA-894] Length = 301 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 18/215 (8%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV--VDDSALRRGK 94 + GKR+RP+L + A L L LACA+E +H A+L+ DD+ +D++ LRRGK Sbjct: 48 LTPGKRVRPLLLILAARDLGCDASQPALMDLACAVEMVHAASLMLDDIPCMDNALLRRGK 107 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIET-------KSQEALEALSLVACT-LAEGELR 146 +G ++L LLS+AF +V + K+Q E S V L +G+ R Sbjct: 108 PTIHRQYGESVAILAAVALLSRAFGVVAQANPLSDSCKTQAVSELSSAVGLQGLVQGQFR 167 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 LS N + E L KT+VLF A L+++++ AG SVR L+ + +LG AFQ Sbjct: 168 DLS-EGNQARSAEAILATNDLKTSVLFDATLQIAAIAAGASASVRHKLREFSRHLGQAFQ 226 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L+DD+ D +N GK+I +D GK TL +L Sbjct: 227 LLDDLADG---LNHTGKDINKD--AGKSTLVAMLG 256 >gi|40882370|dbj|BAD07374.1| farnesyl diphosphate synthase [Actinoplanes sp. A40644] Length = 362 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 114/253 (45%), Gaps = 32/253 (12%) Query: 16 NFLILKR-----ICSDVEMIPDVVKYLIFSGGKRLRPMLT----LATALMLEYRGDNHVL 66 NF I +R + D ++ ++ + GGKR+RP + E G VL Sbjct: 21 NFFIERRAEAAALGPDFAVMVGDLESFVLRGGKRIRPTFAWLGWIGAGGDPEGPGAEAVL 80 Query: 67 LACA-IEFIHTATLLHDDVVDDSALRRGKVAARL----------------VWGNQTSVLV 109 AC+ E +H A L+HDD++D S RRG AA + ++G T++L+ Sbjct: 81 SACSGFELLHAAGLIHDDIIDASRTRRGHPAAHITYAERHRASRFSGDSQIFGTGTAILI 140 Query: 110 GDFLLSQAFCMVIETKSQEALEA-----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164 GD L A +V ++ +A S V + G+L L D + L V Sbjct: 141 GDLALIWADVLVRGSRLPADAQARVSPVWSAVRSEVMYGQLLDLISQARDDEDVDAALRV 200 Query: 165 IKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 + KTA L+ + IAG + A +S+G LGIAFQL DD+L G+ GK Sbjct: 201 NRYKTASYTVERPLQFGAAIAGASPDLITAYRSFGAGLGIAFQLRDDLLGVFGDPEVTGK 260 Query: 224 NIGEDFRNGKPTL 236 G+D R GK T+ Sbjct: 261 PSGDDLREGKRTV 273 >gi|260776529|ref|ZP_05885424.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260607752|gb|EEX34017.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 294 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 12/224 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR RP L T ML + + A AIE IH +L+HDD+ +DD Sbjct: 32 EAMRYGLLLGGKRARPFLVYITGQMLGCKLEELDTPASAIECIHAYSLIHDDLPAMDDDE 91 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGE-LRQ 147 LRRG+ + + T++L GD L + AF ++ + + S EA + LAE Sbjct: 92 LRRGQPTCHIKFDEATAILTGDALQTLAFTILADGELSPEAETYRIKMVKALAEASGANG 151 Query: 148 LSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGM 199 + L + LD++ E + ++ ++KT L A+ + +L AG + S + L + Sbjct: 152 MCLGQALDLSAEGQKVSLAELENIHRNKTGALMKCAIRLGALAAGQKGSEILPQLDQFAD 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+ DD+LD + +GK G D K T P +L + Sbjct: 212 AIGLAFQVQDDILDIISDTETLGKPQGSDQDLDKSTYPALLGLE 255 >gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus] Length = 359 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 120/229 (52%), Gaps = 17/229 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP+L +A+ ++ + ACA E IHT +L+HDD+ +D+ Sbjct: 95 IHESMRYSLLAGGKRVRPLLCIASCELVGGDERTAMPAACATEMIHTMSLIHDDLPCMDN 154 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL-----AE 142 LRRGK V+G +VL GD LL+ AF V A E + +E Sbjct: 155 DDLRRGKPTNHKVYGENVAVLAGDALLALAFEHVAAATEGVAPERVVRAVVEFGRYIGSE 214 Query: 143 G-------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G ++ L++ + V + +Y+H+ KTA L AA+ + +++ G + + L+ Sbjct: 215 GLVGGQVVDIHSEGLAE-VGVEQLEYIHL--HKTAALLEAAVVMGAILGGADDEAVEKLR 271 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + +G+ FQ+VDD+LD E+GK G+D K T P +L ++ Sbjct: 272 KFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLLTDKTTYPKLLGLEK 320 >gi|16128406|ref|NP_414955.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655] gi|74310990|ref|YP_309409.1| geranyltranstransferase [Shigella sonnei Ss046] gi|82775670|ref|YP_402017.1| geranyltranstransferase [Shigella dysenteriae Sd197] gi|89107291|ref|AP_001071.1| geranyltranstransferase [Escherichia coli str. K-12 substr. W3110] gi|170080007|ref|YP_001729327.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B] gi|170683582|ref|YP_001742558.1| geranyltranstransferase [Escherichia coli SMS-3-5] gi|187730884|ref|YP_001879130.1| geranyltranstransferase [Shigella boydii CDC 3083-94] gi|188492835|ref|ZP_03000105.1| geranyltranstransferase [Escherichia coli 53638] gi|191166720|ref|ZP_03028547.1| geranyltranstransferase [Escherichia coli B7A] gi|194438870|ref|ZP_03070955.1| geranyltranstransferase [Escherichia coli 101-1] gi|209917634|ref|YP_002291718.1| geranyltranstransferase [Escherichia coli SE11] gi|218698670|ref|YP_002406299.1| geranyltranstransferase [Escherichia coli IAI39] gi|218703704|ref|YP_002411223.1| geranyltranstransferase [Escherichia coli UMN026] gi|238899709|ref|YP_002925505.1| geranyltranstransferase [Escherichia coli BW2952] gi|253774594|ref|YP_003037425.1| geranyltranstransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160487|ref|YP_003043595.1| geranyltranstransferase [Escherichia coli B str. REL606] gi|256020388|ref|ZP_05434253.1| geranyltranstransferase [Shigella sp. D9] gi|256023962|ref|ZP_05437827.1| geranyltranstransferase [Escherichia sp. 4_1_40B] gi|293403541|ref|ZP_06647632.1| geranyltranstransferase [Escherichia coli FVEC1412] gi|293413676|ref|ZP_06656325.1| geranyltranstransferase [Escherichia coli B185] gi|297518956|ref|ZP_06937342.1| geranyltranstransferase [Escherichia coli OP50] gi|298379153|ref|ZP_06989034.1| geranyltranstransferase [Escherichia coli FVEC1302] gi|300900489|ref|ZP_07118656.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300918198|ref|ZP_07134805.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300930283|ref|ZP_07145696.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|300947928|ref|ZP_07162076.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300957986|ref|ZP_07170151.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|301022588|ref|ZP_07186460.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|301025692|ref|ZP_07189208.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|301647344|ref|ZP_07247156.1| polyprenyl synthetase [Escherichia coli MS 146-1] gi|307137064|ref|ZP_07496420.1| geranyltranstransferase [Escherichia coli H736] gi|309787014|ref|ZP_07681626.1| geranyltranstransferase [Shigella dysenteriae 1617] gi|309794853|ref|ZP_07689274.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|312970516|ref|ZP_07784697.1| geranyltranstransferase [Escherichia coli 1827-70] gi|331640938|ref|ZP_08342073.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H736] gi|331651356|ref|ZP_08352381.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli M718] gi|331661799|ref|ZP_08362722.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA143] gi|331671966|ref|ZP_08372762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA280] gi|332281567|ref|ZP_08393980.1| geranyltranstransferase [Shigella sp. D9] gi|124931|sp|P22939|ISPA_ECOLI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|46015527|pdb|1RQJ|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Risedronate gi|46015528|pdb|1RQJ|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Risedronate gi|216584|dbj|BAA00599.1| farnesyl diphosphate synthase [Escherichia coli] gi|1773105|gb|AAB40177.1| geranyltransperase [Escherichia coli] gi|1786623|gb|AAC73524.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655] gi|73854467|gb|AAZ87174.1| geranyltranstransferase [Shigella sonnei Ss046] gi|81239818|gb|ABB60528.1| geranyltranstransferase [Shigella dysenteriae Sd197] gi|85674561|dbj|BAE76201.1| geranyltranstransferase [Escherichia coli str. K12 substr. W3110] gi|169887842|gb|ACB01549.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B] gi|170521300|gb|ACB19478.1| geranyltranstransferase [Escherichia coli SMS-3-5] gi|187427876|gb|ACD07150.1| geranyltranstransferase [Shigella boydii CDC 3083-94] gi|188488034|gb|EDU63137.1| geranyltranstransferase [Escherichia coli 53638] gi|190903231|gb|EDV62953.1| geranyltranstransferase [Escherichia coli B7A] gi|194422164|gb|EDX38166.1| geranyltranstransferase [Escherichia coli 101-1] gi|209910893|dbj|BAG75967.1| geranyltranstransferase [Escherichia coli SE11] gi|218368656|emb|CAR16395.1| geranyltranstransferase [Escherichia coli IAI39] gi|218430801|emb|CAR11675.1| geranyltranstransferase [Escherichia coli UMN026] gi|238861298|gb|ACR63296.1| geranyltranstransferase [Escherichia coli BW2952] gi|242376199|emb|CAQ30890.1| farnesyl diphosphate synthase / geranyl diphosphate synthase [Escherichia coli BL21(DE3)] gi|253325638|gb|ACT30240.1| Polyprenyl synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972388|gb|ACT38059.1| geranyltranstransferase [Escherichia coli B str. REL606] gi|253976598|gb|ACT42268.1| geranyltranstransferase [Escherichia coli BL21(DE3)] gi|260450392|gb|ACX40814.1| Polyprenyl synthetase [Escherichia coli DH1] gi|284920231|emb|CBG33290.1| geranyltranstransferase [Escherichia coli 042] gi|291429394|gb|EFF02414.1| geranyltranstransferase [Escherichia coli FVEC1412] gi|291433734|gb|EFF06707.1| geranyltranstransferase [Escherichia coli B185] gi|298280266|gb|EFI21770.1| geranyltranstransferase [Escherichia coli FVEC1302] gi|299880004|gb|EFI88215.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|300315322|gb|EFJ65106.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|300355970|gb|EFJ71840.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300397469|gb|EFJ81007.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|300414649|gb|EFJ97959.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300452528|gb|EFK16148.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300461855|gb|EFK25348.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|301074489|gb|EFK89295.1| polyprenyl synthetase [Escherichia coli MS 146-1] gi|308121506|gb|EFO58768.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|308924592|gb|EFP70087.1| geranyltranstransferase [Shigella dysenteriae 1617] gi|309700683|emb|CBI99979.1| geranyltranstransferase [Escherichia coli ETEC H10407] gi|310337165|gb|EFQ02303.1| geranyltranstransferase [Escherichia coli 1827-70] gi|315135103|dbj|BAJ42262.1| geranyltranstransferase [Escherichia coli DH1] gi|320201662|gb|EFW76238.1| geranyltranstransferase [Escherichia coli EC4100B] gi|323164212|gb|EFZ50019.1| geranyltranstransferase [Shigella sonnei 53G] gi|323170503|gb|EFZ56153.1| geranyltranstransferase [Escherichia coli LT-68] gi|323943227|gb|EGB39383.1| polyprenyl synthetase [Escherichia coli E482] gi|323963407|gb|EGB58969.1| polyprenyl synthetase [Escherichia coli H489] gi|323972271|gb|EGB67481.1| polyprenyl synthetase [Escherichia coli TA007] gi|324016723|gb|EGB85942.1| polyprenyl synthetase [Escherichia coli MS 117-3] gi|331037736|gb|EGI09956.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H736] gi|331051097|gb|EGI23149.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli M718] gi|331060221|gb|EGI32185.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA143] gi|331070955|gb|EGI42314.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA280] gi|332103919|gb|EGJ07265.1| geranyltranstransferase [Shigella sp. D9] gi|332341784|gb|AEE55118.1| geranyltranstransferase IspA [Escherichia coli UMNK88] Length = 299 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|315616639|gb|EFU97256.1| geranyltranstransferase [Escherichia coli 3431] Length = 299 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGKANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|227878890|ref|ZP_03996795.1| geranyltranstransferase [Lactobacillus crispatus JV-V01] gi|256849774|ref|ZP_05555205.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus MV-1A-US] gi|262046527|ref|ZP_06019488.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus MV-3A-US] gi|227861524|gb|EEJ69138.1| geranyltranstransferase [Lactobacillus crispatus JV-V01] gi|256713263|gb|EEU28253.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus MV-1A-US] gi|260572976|gb|EEX29535.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus MV-3A-US] Length = 289 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 10/249 (4%) Query: 21 KRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTA 77 K + S+V + I ++ Y + +GGKRLRP+L LAT L + + V +AC IE IHT Sbjct: 21 KHLASEVKDQKISQIMAYSVMAGGKRLRPLLFLATLNTLGKKIEEPEVRIACGIELIHTY 80 Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E + L L Sbjct: 81 SLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSNSAQLVELIT 140 Query: 136 VACT---LAEGELRQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSV 190 A + G+ + + N V+ + +++ ++ KT L A++E++++ A + Sbjct: 141 KAVGPNGMVGGQYLDIDSTNNASVSGDAKFINKMEWLKTGCLIQASVEMAAIFAKASDIE 200 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L + G ++Q+ DD++D E GK +D GK +L + K Sbjct: 201 KVKLIDFAKVFGRSYQIYDDLVDVVETSEEAGKATHKDEAEGKNNTLTLLGIDQSRKELT 260 Query: 251 NFWKSTIND 259 + K +D Sbjct: 261 DLIKQAQDD 269 >gi|192362196|ref|YP_001983789.1| geranyltranstransferase [Cellvibrio japonicus Ueda107] gi|190688361|gb|ACE86039.1| geranyltranstransferase [Cellvibrio japonicus Ueda107] Length = 295 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/245 (28%), Positives = 124/245 (50%), Gaps = 22/245 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL------ACAIEFIHTATL 79 D + ++Y +F+GGKR+RP+L A+AL + + H+ L A A+E +H +L Sbjct: 29 DPTQLRAAMRYSLFNGGKRVRPILAYASALAI----NPHISLKQVDPIAAAVECLHAYSL 84 Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSL 135 +HDD+ LRRGK + + T++L GD L + AF ++ IE + ++ + + Sbjct: 85 VHDDLPAMDDDDLRRGKPTCHIAFNEATAILAGDGLQTLAFELLGSIEAPADIRIQLIQV 144 Query: 136 VA-CTLAEG-----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +A + EG + ++ + L + + + +H + KT L A++ + +L AG N+ Sbjct: 145 LAKGSGVEGMVLGQAIDLAAVEQQLTLEQLETMH--RYKTGALIRASVTMGALFAGANNT 202 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL Y +G+AFQ+ DD+LD + +GK G D KPT +L + Sbjct: 203 QLAALDQYASAIGLAFQVQDDILDVISDTQTLGKQQGADIARNKPTYVSLLGLDAARTKA 262 Query: 250 KNFWK 254 + ++ Sbjct: 263 DDLYR 267 >gi|332361748|gb|EGJ39552.1| geranyltranstransferase [Streptococcus sanguinis SK1056] Length = 291 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 127/262 (48%), Gaps = 34/262 (12%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEF 73 +F +++ SD + +V+ Y + +GGKR+RP+L L A LE + H +A A+E Sbjct: 16 DFYRSQQVSSD---LSEVILYSVQAGGKRIRPLLLLELIQAFGLEL-AEAHYQVASALEM 71 Query: 74 IHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQ-- 127 IHT +L+HDD+ RRG++ + +G ++L GD L + ++ E SQ Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVK 131 Query: 128 -EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + LSL A + +GE + +SL ED + +KT L Sbjct: 132 VDLISELSLAAGSFGMVAGQVLDMQGEGQAISL--------EDLKTIHANKTGKLLMYPF 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LIA V+ V+ L+ G LG+AFQ+ DD+LD E+GK +D K T P Sbjct: 184 VAAGLIAEVEYFVQDKLRRIGELLGLAFQVRDDILDVTASFEELGKTPQKDLAAAKSTYP 243 Query: 238 VILAFQRGTKREKNFWKSTIND 259 L G KNF+ T+++ Sbjct: 244 AFL----GLDGAKNFFNQTLDE 261 >gi|306813113|ref|ZP_07447306.1| geranyltranstransferase [Escherichia coli NC101] gi|331645594|ref|ZP_08346698.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli M605] gi|331656475|ref|ZP_08357437.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA206] gi|331681814|ref|ZP_08382447.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H299] gi|305853876|gb|EFM54315.1| geranyltranstransferase [Escherichia coli NC101] gi|324010099|gb|EGB79318.1| polyprenyl synthetase [Escherichia coli MS 57-2] gi|331045756|gb|EGI17882.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli M605] gi|331054723|gb|EGI26732.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA206] gi|331081016|gb|EGI52181.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H299] Length = 299 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLTEQSLDTSALEALAD 292 >gi|258543735|ref|ZP_05703969.1| geranyltranstransferase [Cardiobacterium hominis ATCC 15826] gi|258521019|gb|EEV89878.1| geranyltranstransferase [Cardiobacterium hominis ATCC 15826] Length = 315 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 12/222 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D ++Y GGKRLR L ATA D+ ACA+E IH +L+HDD+ Sbjct: 57 DAMRYATLGGGKRLRAALLYATADDFGVPPDSVDAAACAVEAIHAYSLIHDDLPAMDDDD 116 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVA--CTLAE 142 LRRG+ + + T++L GD L + AF ++ + A ++ L+ A + Sbjct: 117 LRRGRPSTHRAFDEATAILAGDALNTLAFALLANSPLPPATRLAQIQTLADAAGWAGMIG 176 Query: 143 GELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G++ ++ + K L + + +H + KT L AAL + +L A + L G +L Sbjct: 177 GQMGDMAATGKTLTLPQLQAIH--RGKTGALIRAALHLGALPAADYAAHAATLDELGEHL 234 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 GIA+Q+ DD+LD +GK G+D GK T PV+L + Sbjct: 235 GIAYQIADDILDATANSATLGKTAGKDAAQGKNTYPVLLGLE 276 >gi|323498628|ref|ZP_08103620.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio sinaloensis DSM 21326] gi|323316326|gb|EGA69345.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio sinaloensis DSM 21326] Length = 294 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 113/239 (47%), Gaps = 12/239 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR RP L T ML + A A+E IH +L+HDD+ +DD Sbjct: 32 EAMRYGLLLGGKRARPFLVYITGQMLGCTLEELDTPAAAVECIHAYSLIHDDLPAMDDDE 91 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQEALEALSLVACTLAEG 143 LRRG+ + + T++L GD L + AF ++ + ++Q +L + A G Sbjct: 92 LRRGQPTCHIKFDEATAILTGDALQTLAFTILADGHLNPDAQAQRIKMVKALAEASGAAG 151 Query: 144 ELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 +L ++N DV+ ++ + ++KT L A+ + ++ AG + V L Y Sbjct: 152 MCMGQALDLAAENRDVSLQELEEIHRNKTGALMKCAIRLGAMAAGSKGVEVLPLLDKYAD 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L + + + Sbjct: 212 AIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAVNKAHTLLNEALQ 270 >gi|295096799|emb|CBK85889.1| farnesyl-diphosphate synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 299 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 123/251 (49%), Gaps = 22/251 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 EAMHYGALLGGKRLRPFLVYATGNMFGISDNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVA-----CT 139 LRRG+ + +G ++L GD L + AF ++ +E ++ L +S +A Sbjct: 94 LRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMVEVSDRDRLAMVSELAMASGVAG 153 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK---S 196 + G+ L ++ VT E + + KT L AA+ + +L AG + R+AL Sbjct: 154 MCGGQALDLE-AEGRQVTLEQLERIHRHKTGALIRAAVRLGALSAGERG--RKALPILDR 210 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L + ++ ++ Sbjct: 211 YAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEHAQRKARDL---- 266 Query: 257 INDGKISVENL 267 I+D + S+ L Sbjct: 267 IDDARRSLNEL 277 >gi|255284124|ref|ZP_05348679.1| geranyltranstransferase [Bryantella formatexigens DSM 14469] gi|255265298|gb|EET58503.1| geranyltranstransferase [Bryantella formatexigens DSM 14469] Length = 295 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 15/217 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y + +GGKRLRP+L T + G AIE IHT +L+HDD+ +D+ Sbjct: 34 EAMNYSMTAGGKRLRPLLMQETYRLFGGNGKVVEPFMAAIEMIHTHSLVHDDLPAMDNDE 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSL------VAC 138 RRGK +V+G ++L GD LL+ A+ +E + EA+++ V Sbjct: 94 YRRGKKTTHVVYGEAMAILAGDGLLNYAYETACRAFALEPGNPHIGEAMTVLTTKTGVYG 153 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L + S+ L + D+++ + KT+ L ++ +++AG + + Sbjct: 154 MLGGQAVDVQSVGGTLSREKLDFIY--RLKTSALIECSMMTGAILAGASEEEIRTIGQVA 211 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++G+AFQ+ DD+LD E+GK G D RN K T Sbjct: 212 SDVGLAFQIQDDILDVTSTSQELGKPTGSDERNHKTT 248 >gi|104779861|ref|YP_606359.1| geranyltranstransferase [Pseudomonas entomophila L48] gi|95108848|emb|CAK13544.1| geranyltranstransferase [Pseudomonas entomophila L48] Length = 295 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 117/232 (50%), Gaps = 16/232 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 ++E + ++Y + +GGKR+RP+L A L + ACA+E IH +L+HDD+ Sbjct: 27 ELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLP 86 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEA-------LEALSL 135 LRRG+ + ++L GD L S AF +++ + S +A ++AL+ Sbjct: 87 AMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPRLSPQADGIRLQMVQALAK 146 Query: 136 VA--CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI-AGVQNSVR 191 A + G+ L S+ LD +Y+H + KT L A++ + +L A + + Sbjct: 147 AAGPAGMVGGQAIDLGSVGVKLDQQALEYMH--RHKTGALIEASVRLGALASARAEQAQL 204 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AL+ Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 205 DALQVYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|238765452|ref|ZP_04626373.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638] gi|238696346|gb|EEP89142.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638] Length = 299 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/266 (29%), Positives = 125/266 (46%), Gaps = 20/266 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A AIE +H +L+HDD+ Sbjct: 34 EAMRYGAVLGGKRLRPYLVYATGQMFGLSLTSLDAPAAAIECVHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG+ + +G ++L GD L + AF ++ E E + LS++A + Sbjct: 94 LRRGQPTCHVKFGEANAILAGDALQTLAFSILAEAPMPEVADKDRLSMIAELAYASGVAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E D L I + KT L AA+ + +L AG V L Y Sbjct: 154 MCGGQALDLEAEARQITLDELERIHRHKTGALIRAAVRLGALAAGTPGREVLPLLDRYAN 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI-- 257 +G+AFQ+ DD+LD G+ +GK G D ++GK T P +L + + ++ + Sbjct: 214 AIGLAFQVQDDILDVIGDTATIGKRQGSDQQHGKSTYPALLGLDCAKAKAMDLYQEAVSA 273 Query: 258 ----NDGKISVENLK--KAFIIMREN 277 ++ ++ L+ FII R+N Sbjct: 274 LNALSEQSYNIAPLQALACFIIERDN 299 >gi|71483031|gb|AAZ32465.1| geranylgeranyl pyrophosphate synthase [uncultured euryarchaeote Alv-FOS1] Length = 352 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/313 (23%), Positives = 144/313 (46%), Gaps = 27/313 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++++ GGKR+R +L + M + D + A +E + + L+HDD++D+S LR Sbjct: 41 EIIEEYTLRGGKRVRALLMILGYRMYGGKDDEIIKAAATLELVQSYFLIHDDIMDESDLR 100 Query: 92 RGKVAARLVW----------------GNQTSVLVGDFLLSQAFCMVIET-----KSQEAL 130 RGK ++ G ++ GD AF + ET + + AL Sbjct: 101 RGKKTVHKIYEEEHLHRGFPGNPARFGENLGIIAGDLANVYAFEIFAETEFDSDRKERAL 160 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNS 189 + L + G+L + S + E+D L + + KTA L + +++AG + Sbjct: 161 QELERIMEYTGYGQLIDVYSSMLPEFGEKDLLLLHEYKTANYTIYGPLALGAILAGAEP- 219 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++L+ + + +GIAFQL DD+L G+ ++GK + D GK TL +I A + E Sbjct: 220 --ESLRDFAIPIGIAFQLQDDILGLFGDEKKIGKPVTSDLAEGKKTLLIIKALENANDEE 277 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR--CLPDSSWK 307 + + + +++E L + I+ +L + A + +L +P+ ++ Sbjct: 278 RKEILEALGNPAVTIEQLMRVREIVEHTGSLEYSRSMAEKLVNEGIAALEKIAVPNREYR 337 Query: 308 KSLMEVVDFCLQR 320 L+ + ++ ++R Sbjct: 338 DILVGMAEYMIRR 350 >gi|239832857|ref|ZP_04681186.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] gi|239825124|gb|EEQ96692.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] Length = 316 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 12/215 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L + +A + GD + +A A+E IH +L+HDD+ L Sbjct: 57 AMRHGVLNGGKRLRPFLVVESAALFGKGGDAVLRVAAALECIHCYSLVHDDLPAMDDDDL 116 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVACTLAEGELRQL 148 RRG+ + ++L GD LL+ AF +V ET A+ + A A G L + Sbjct: 117 RRGQPTVHKAFDEAAAILAGDSLLTYAFDIVSSDETDLDPAIRVRLVSALARASG-LGGM 175 Query: 149 SLSKNLDVTEE----DYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ E D +I KT L A E ++IA R+ + +G + Sbjct: 176 AGGQALDLMAETSKPDEAGIITLQAMKTGALIRFACEAGAIIANASTEDRERMAEFGSAI 235 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + MGK G+D GK TL Sbjct: 236 GLAFQLADDLLDVTADAEAMGKATGKDAAAGKATL 270 >gi|157736691|ref|YP_001489374.1| geranyltranstransferase [Arcobacter butzleri RM4018] gi|157698545|gb|ABV66705.1| geranyltranstransferase [Arcobacter butzleri RM4018] Length = 286 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 118/217 (54%), Gaps = 24/217 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLAT-----ALMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 D + ++ +GGKR RPML L+ +L++ N + +A +EF+HT +L+HDD+ Sbjct: 28 DALADMLKAGGKRFRPMLLLSVVKSNKSLLVP----NAMSVALGVEFLHTYSLIHDDLPA 83 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D+S LRRG + T++LVGD L ++AF ++ ++ + L+ C G Sbjct: 84 MDNSDLRRGFQTLHKKYDEVTAILVGDALNTEAFNLIANASLHNDIK-VELIKCLAHNGG 142 Query: 145 LRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + + + + +D E ++LH+ KTA L +A+L++ ++I+ ++ L Sbjct: 143 INGMIIGQAIDCHFEKQKIQLNQLEFLHI--HKTARLIAASLKMGAIISEYDLQTQEKLY 200 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED-FRN 231 ++G++LG+ FQ+ DD++D E GK D F+N Sbjct: 201 NFGIDLGLLFQIQDDIIDETCTEEEAGKTTQNDGFKN 237 >gi|315635861|ref|ZP_07891123.1| geranyltranstransferase [Arcobacter butzleri JV22] gi|315479840|gb|EFU70511.1| geranyltranstransferase [Arcobacter butzleri JV22] Length = 286 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 118/217 (54%), Gaps = 24/217 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLAT-----ALMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 D + ++ +GGKR RPML L+ +L++ N + +A +EF+HT +L+HDD+ Sbjct: 28 DALADMLKAGGKRFRPMLLLSVVKSNKSLLVS----NAMSVALGVEFLHTYSLIHDDLPA 83 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D+S LRRG + T++LVGD L ++AF ++ ++ + L+ C G Sbjct: 84 MDNSDLRRGFQTLHKKYDEVTAILVGDALNTEAFNLIANASLHNDIK-VELIKCLAHNGG 142 Query: 145 LRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + + + + +D E ++LH+ KTA L +A+L++ ++I+ ++ L Sbjct: 143 INGMIIGQAIDCHFEKQKIQLNQLEFLHI--HKTARLIAASLKMGAIISEYDLQTQEKLY 200 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED-FRN 231 ++G++LG+ FQ+ DD++D E GK D F+N Sbjct: 201 NFGIDLGLLFQIQDDIIDETCTEEEAGKTTQNDGFKN 237 >gi|134101792|ref|YP_001107453.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133914415|emb|CAM04528.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 249 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 3/177 (1%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H +LLHDDV+D RR + ++G ++L GD +L A ++ T S+ AL A+ Sbjct: 1 MHNFSLLHDDVMDGDLTRRHRPTVWSLFGTSNAILAGDAILGLAPRILSATGSEHALTAI 60 Query: 134 SLVA-CT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 C L EG+ +S S+ +DV + + + ++KT L + + L AG + Sbjct: 61 DWFGKCVVKLCEGQAADISFSERVDVGIDACVAMARAKTGELLGTSCALGGLFAGADRTQ 120 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 AL+ +G +G+AFQLVDD+L G+ GK + D + K +LPV A GT+ Sbjct: 121 ITALREFGSEIGLAFQLVDDLLGIWGDPAVTGKPVRSDLVDRKKSLPVTAALGSGTQ 177 >gi|294664721|ref|ZP_06730051.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605499|gb|EFF48820.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 291 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 8/218 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +++ + GGKR+RP+L A+ + D A A+E IH +L+HDD+ +DD AL Sbjct: 34 AMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGEL 145 RRG+ + + T++L GD L ++AF ++ + L ++L+ A Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTRAFELLATAPASAELRVGWMQSLANAAGAAGMCGG 153 Query: 146 RQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L + + +L + + KT L AA+ + +L G + +Q L + LG+A Sbjct: 154 QALDIDATGQLQSLQHLQRMHALKTGALIRAAVRMGALTGGAAAADQQRLDEFADALGLA 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 FQ+ DD+LD ++GK G+D K T P +L Sbjct: 214 FQVRDDILDVESSSAQLGKTAGKDAAQSKSTYPALLGM 251 >gi|331084735|ref|ZP_08333823.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410829|gb|EGG90251.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 296 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 115/233 (49%), Gaps = 14/233 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 ++I + ++Y + +GGKRLRPML T M AIE IHT +L+HDD+ Sbjct: 30 QVIMEAMEYSLMAGGKRLRPMLLWETFQMFGSAAKTVRPFMAAIEMIHTYSLVHDDLPAM 89 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEAL---EALSLVA-- 137 RRG+ +V+G +L GD LL+ AF C E +EA +AL ++A Sbjct: 90 DDDDYRRGRKTTHIVYGEDMGILAGDALLNYAFETACTAFEEAPEEATRIGKALQVLAKK 149 Query: 138 ---CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + G++ +S S ++TE+ + + KT L +A+ + +++AG + + Sbjct: 150 AGIYGMIGGQVVDVSASGK-NITEDILSFIYELKTGALLESAMMIGAILAGAEEEEVAVI 208 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + +GIAFQ+ DD+LD +GK + D +N K T + ++ K Sbjct: 209 EQVAKKIGIAFQIQDDILDVTSTEEVLGKPVFSDQKNEKTTYVTLFGLEKAKK 261 >gi|325969747|ref|YP_004245939.1| polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28] gi|323708950|gb|ADY02437.1| Polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28] Length = 296 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 6/197 (3%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + I + GK +RP L L A L + +L A ++E IHTA+LL DD++D +RRG Sbjct: 47 HYIRNRGKLIRPTLVLLMAYALGNGTGIERAILPAASVELIHTASLLQDDIMDQQRIRRG 106 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 ++G+ T++L D ++++A I + + + L + LA G+ + LS Sbjct: 107 VETPYSIYGSHTAMLASDLIIAKAVEFAIRSGDNDIVFELLNSSIKLAVGQSLESELSGR 166 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ-NSVRQALKSYGMNLGIAFQLVDDVL 212 + T +DYL +I KTA L +++ V + V+ N V ++ G +GIAFQ+ DDV+ Sbjct: 167 DNTTIDDYLKLIYYKTASLIESSMIVGAYSVNVKDNEVISRIRDIGRFVGIAFQVRDDVI 226 Query: 213 DYRGEVNEMGKNIGEDF 229 DY +N KN G ++ Sbjct: 227 DY---LNMDSKNPGVNY 240 >gi|218688284|ref|YP_002396496.1| geranyltranstransferase [Escherichia coli ED1a] gi|218425848|emb|CAR06654.1| geranyltranstransferase [Escherichia coli ED1a] Length = 299 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKAQDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLTEQSLDTSALEALAD 292 >gi|319957682|ref|YP_004168945.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511] gi|319420086|gb|ADV47196.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511] Length = 294 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/240 (31%), Positives = 120/240 (50%), Gaps = 31/240 (12%) Query: 9 LKDMEKVNFLILKRICSDVEMIPD---VVKYLIFSGGKRLRPMLTLA-----TALMLEYR 60 ++D E NFL D PD ++ ++ +GGKR RP L L L++E Sbjct: 1 MQDFE--NFLTQNLPVVDT-FHPDYNEALRAMVLAGGKRFRPRLLLGIVEAYAPLLVE-- 55 Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + + A A+E HT +L+HDD+ +DD+ LRRG+ + ++L GD L + AF Sbjct: 56 --SAMTPALALEIFHTYSLIHDDLPAMDDADLRRGEPTLHTRFDEALAILAGDALNTHAF 113 Query: 119 CMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKNLDV-------TEEDYLHVIKSK 168 M+ S+ A A + LV G + L + +D+ + E + + +K Sbjct: 114 EML----SRSAFRADVRIELVRILAENGGSGGMVLGQAIDLEFEKSPLSLEQVVELHTNK 169 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 TA L +AALE+ ++I + R+AL +G++LG+ FQ+ DD+LD E GK G D Sbjct: 170 TAKLIAAALEMGAVIVDLPKETRRALYRFGIDLGLLFQVQDDILDATQSAEEAGKPTGHD 229 >gi|110804443|ref|YP_687963.1| geranyltranstransferase [Shigella flexneri 5 str. 8401] gi|110613991|gb|ABF02658.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella flexneri 5 str. 8401] Length = 299 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 20/250 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENL 267 +D + S++ L Sbjct: 268 DDARQSLKQL 277 >gi|218282379|ref|ZP_03488661.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989] gi|218216665|gb|EEC90203.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989] Length = 280 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/254 (29%), Positives = 131/254 (51%), Gaps = 18/254 (7%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV--LLACAIEF 73 ++L+++ +D D + Y + +GGKR+RPML + ++ Y D HV ACAIE Sbjct: 7 DYLLVRVQENDDSRTKDAMAYSLMNGGKRVRPMLLFS--VLEGYGMDAHVGYPCACAIEM 64 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IHT +L+HDD+ +D+ LRRGK + + T++L GD LL++AF +V++++ A + Sbjct: 65 IHTYSLVHDDLPAMDNDDLRRGKPSCHKAYDEATAILAGDGLLTKAFEVVLDSECS-AKQ 123 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVSSLI 183 ++LV + + + LD+ E+ + + KT+ L + L ++ Sbjct: 124 KVALVKALSWYAGIDGMIYGQTLDLQAENDTNPTFALLQEIDHYKTSKLLTLPLVCGCIL 183 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + + + G+ LG+ FQ+ DD+LD G +GK++ D N K T +L + Sbjct: 184 ANKFDDIDH-FRKIGLVLGLEFQMQDDILDVVGSEEVVGKSL-SDEDNHKVTAVSLLGLE 241 Query: 244 RGTKREKNFWKSTI 257 G K + TI Sbjct: 242 -GAKDMVKSYDETI 254 >gi|215485502|ref|YP_002327933.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69] gi|312964557|ref|ZP_07778813.1| geranyltranstransferase [Escherichia coli 2362-75] gi|215263574|emb|CAS07904.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69] gi|312290791|gb|EFR18668.1| geranyltranstransferase [Escherichia coli 2362-75] gi|315299587|gb|EFU58835.1| polyprenyl synthetase [Escherichia coli MS 16-3] gi|323191339|gb|EFZ76602.1| geranyltranstransferase [Escherichia coli RN587/1] Length = 299 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 76/263 (28%), Positives = 128/263 (48%), Gaps = 16/263 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E D L I + KT L AA+ + +L AG + + L Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRNALPVLDKYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I+D Sbjct: 214 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----IDD 269 Query: 260 GKISVENLKKAFIIMRENRALVD 282 + S++ L + + AL D Sbjct: 270 ARQSLKQLTEQSLDTSALEALAD 292 >gi|322372793|ref|ZP_08047329.1| geranyltranstransferase [Streptococcus sp. C150] gi|321277835|gb|EFX54904.1| geranyltranstransferase [Streptococcus sp. C150] Length = 290 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 31/253 (12%) Query: 36 YLIFSGGKRLRPM--LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 Y + GGKR+RP+ L L LE D+H +A ++E IHT +L+HDD+ +D+ R Sbjct: 32 YSVDGGGKRIRPLIFLDLLEGFGLELT-DSHFDVAASLEMIHTGSLIHDDLPAMDNDDYR 90 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVACTLA----- 141 RG + + T++L GD L F ++ +T+ E ++ALS + T Sbjct: 91 RGCLTNHKKFDEATAILAGDSLFLDPFDLLAQTELSAEIRVELIQALSHASGTFGMVGGQ 150 Query: 142 ----EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 +GE ++L LS+ + E KT L + + ++A V L+ Sbjct: 151 MLDMKGEGQELDLSQLAQIHEH--------KTGKLLTFPFVAAGIVAQQGLEVLDNLQEA 202 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G +G+AFQ+ DD+LD + +GK G+D GK T P +L G + + + ++ Sbjct: 203 GQLIGLAFQVRDDILDVTADFEALGKTPGKDVVAGKSTYPALL----GLDKSYDILEESL 258 Query: 258 NDGKISVENLKKA 270 N + +NL ++ Sbjct: 259 NKAEAIFQNLAES 271 >gi|294625513|ref|ZP_06704141.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600182|gb|EFF44291.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 291 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 8/218 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +++ + GGKR+RP+L A+ + D A A+E IH +L+HDD+ +DD AL Sbjct: 34 AMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAMAVELIHAYSLVHDDLPAMDDDAL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGEL 145 RRG+ + + T++L GD L ++AF ++ + L ++L+ A Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTRAFELLATAPASAELRVGWMQSLANAAGAAGMCGG 153 Query: 146 RQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L + + +L + + KT L AA+ + +L G + +Q L + LG+A Sbjct: 154 QALDIDATGQLQSLQHLQRMHALKTGALIRAAVRMGALTGGAAAADQQRLDEFADALGLA 213 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 FQ+ DD+LD ++GK G+D K T P +L Sbjct: 214 FQVRDDILDVESSSAQLGKTAGKDAAQSKSTYPALLGM 251 >gi|324114640|gb|EGC08608.1| polyprenyl synthetase [Escherichia fergusonii B253] Length = 299 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIGG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPILDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKAQDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|293418488|ref|ZP_06660923.1| geranyltranstransferase [Escherichia coli B088] gi|291325016|gb|EFE64431.1| geranyltranstransferase [Escherichia coli B088] gi|323184753|gb|EFZ70124.1| geranyltranstransferase [Escherichia coli 1357] Length = 299 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTVTLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|218549919|ref|YP_002383710.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469] gi|218357460|emb|CAQ90099.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469] Length = 299 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIGG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKAQDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|119026031|ref|YP_909876.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium adolescentis ATCC 15703] gi|154488796|ref|ZP_02029645.1| hypothetical protein BIFADO_02103 [Bifidobacterium adolescentis L2-32] gi|118765615|dbj|BAF39794.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium adolescentis ATCC 15703] gi|154082933|gb|EDN81978.1| hypothetical protein BIFADO_02103 [Bifidobacterium adolescentis L2-32] Length = 362 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 91/303 (30%), Positives = 143/303 (47%), Gaps = 38/303 (12%) Query: 41 GGKRLRPMLTL------ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 GGKRLR +LTL A + E D + LACAIE T L+HDD++DDS LRRGK Sbjct: 51 GGKRLRALLTLDAFRAFAPQDVAERDMDAVLDLACAIEVFQTGALVHDDIIDDSDLRRGK 110 Query: 95 VAARLVWGNQT---------SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE--- 142 +A T +++GD L + + + I K+ L + S V Sbjct: 111 PSAHRALATDTHSDAIGHGLGIMLGDMLATAS--VDIANKAACRLGSGSSVVSAFLNMHR 168 Query: 143 ----GELRQLSLSKN-LDVTEE---DYLHVIKSKTAVLFS-AALEVSSLIAGVQNS-VRQ 192 G++ L++ N LD EE L+V + KTA + A LE L AG+ + R+ Sbjct: 169 EVEIGQVLDLAVELNTLDDPEELASASLNVFRWKTASYTTIAPLEFGMLAAGLAPADARR 228 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK-- 250 + G+ LG+AFQL DD+LD G GK +G D R GK T+ + A + E+ Sbjct: 229 LALAIGLPLGLAFQLADDLLDVIGSSRNTGKPVGGDIREGKRTVLLADAIEAAGDVERRE 288 Query: 251 --NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 + W++ D ++++A + A+ ++ R ++K ++ L S +K Sbjct: 289 LIDMWEAESRDEA----HVRRAIALFESTGAIARSKERIAGLWLESKAAIETLELSQDRK 344 Query: 309 SLM 311 ++ Sbjct: 345 DML 347 >gi|148560740|ref|YP_001259620.1| geranyltranstransferase [Brucella ovis ATCC 25840] gi|148371997|gb|ABQ61976.1| geranyltranstransferase [Brucella ovis ATCC 25840] Length = 304 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 12/215 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L L +A + G + +A A+E IH +L+HDD+ L Sbjct: 45 AMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDL 104 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLV-ACTLAEGELRQL 148 RRG+ + ++L GD LL+ AF ++ +++ +A + LV A T A G L + Sbjct: 105 RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIASDETELDATTRIKLVCALTRASG-LGGM 163 Query: 149 SLSKNLDVTEE----DYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ E D +I KT L A E ++IAG R+ + +G + Sbjct: 164 AGGQALDLMAETRKPDEAGIITLQAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAI 223 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + MGK G+D K TL Sbjct: 224 GLAFQLADDLLDVTADAGTMGKATGKDAAARKATL 258 >gi|323495108|ref|ZP_08100195.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio brasiliensis LMG 20546] gi|323310659|gb|EGA63836.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio brasiliensis LMG 20546] Length = 294 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 14/224 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR RP L T ML + ++ A A+E IH +L+HDD+ +DD Sbjct: 32 EAMRYGLLLGGKRARPFLVYITGQMLGCKLEDLDTPASAVECIHAYSLIHDDLPAMDDDE 91 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----------ALSLVACT 139 LRRG+ + + T++L GD L + AF ++ + + E A + A Sbjct: 92 LRRGQPTCHIKFDEATAILTGDALQTLAFTILADGQLNPEAENYRIKMVKVLADASGANG 151 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYG 198 + G+ L+ ++N +V+ ++ + ++KT L +A+ + +L AG + V L Y Sbjct: 152 MCMGQALDLA-AENRNVSLQELEEIHRNKTGALMKSAIRLGALAAGEKGERVLPLLDQYA 210 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD + +GK G D K T P +L Sbjct: 211 DAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGL 254 >gi|260599331|ref|YP_003211902.1| Geranylgeranyl pyrophosphate synthetase [Cronobacter turicensis z3032] gi|260218508|emb|CBA33693.1| Geranylgeranyl pyrophosphate synthetase [Cronobacter turicensis z3032] Length = 338 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 116/214 (54%), Gaps = 18/214 (8%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV--VDDSALRRGK 94 + GKR+RP+L + TA L L LACA+E +H A+L+ DD+ +D++ LRRGK Sbjct: 85 LTPGKRVRPLLLILTACDLGCDASQPALMDLACAVEMVHAASLMLDDIPCMDNALLRRGK 144 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIET-------KSQEALEALSLVACT-LAEGELR 146 +G ++L LLS+AF ++ + K+Q E S V L +G+ R Sbjct: 145 PTIHRQYGESVAILAAVALLSRAFGVIAQASPLSDSCKTQAVSELSSAVGLQGLVQGQFR 204 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 LS N + E L KT+VLF A L+++++ AG SVR L+ + +LG AFQ Sbjct: 205 DLS-EGNQARSAEAILATNDLKTSVLFDATLQIAAIAAGASASVRHKLREFSRHLGQAFQ 263 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+DD+ D ++ GK+I +D GK TL +L Sbjct: 264 LLDDLAD---GLSNTGKDINKD--AGKSTLVAML 292 >gi|320108147|ref|YP_004183737.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4] gi|319926668|gb|ADV83743.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4] Length = 309 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 24/248 (9%) Query: 20 LKRICSDVEMIPDVV----KYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFI 74 L+R+ E+ P + +Y +F+GGKRLRP+L + M+ + + L A+E + Sbjct: 23 LERLLPGSEIAPHSIHRSMRYSVFAGGKRLRPILCMEAGRMVAGKLPAGIADLGSALEML 82 Query: 75 HTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFL-------LSQAFC---MVI 122 HT +L+HDD+ LRRGK + +V+G ++L GD L LS+ C + Sbjct: 83 HTYSLIHDDLPSFDDDDLRRGKPTSHIVFGEAIAILTGDALQTFAYETLSRLSCPAEATV 142 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-------TEEDYLHVIKSKTAVLFSA 175 + + A+ + V T G + + LD+ T E + ++KT L + Sbjct: 143 QIIREIAIATGTGVGPTDGTGLPYGMIGGQVLDIEGEGTKPTAEQVDRIHRAKTGALITT 202 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++ + AG + L+ +G G+AFQ+VDDVLD ++GK G+D + K T Sbjct: 203 SIVTGGIFAGASAETVEHLRLFGQRAGLAFQIVDDVLDMTQSSEDLGKTAGKDTASDKVT 262 Query: 236 LPVILAFQ 243 P + + Sbjct: 263 WPAVFGIE 270 >gi|320546351|ref|ZP_08040668.1| geranyltranstransferase [Streptococcus equinus ATCC 9812] gi|320449005|gb|EFW89731.1| geranyltranstransferase [Streptococcus equinus ATCC 9812] Length = 289 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 34/237 (14%) Query: 31 PDVVKYLIFS---GGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 PD+++ +++S GGKR+RP++ L +LE G D H +A A+E IHT +L+HDD Sbjct: 23 PDLIEAILYSVDGGGKRVRPLIFLE---LLEGFGVALTDAHYDVAAALEMIHTGSLIHDD 79 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEAL------- 133 + +D+ RRG++ + T++L GD L + +V + S E AL Sbjct: 80 LPAMDNDDYRRGRLTNHKKFNEATAILAGDSLFLDPYDLVANAELSAEVKVALIAELAHA 139 Query: 134 ----SLVACTL--AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +V + EGE R+LSLS E +H +KT L + + + ++AG+ Sbjct: 140 SGTYGMVGGQMLDMEGEERKLSLS------ELQLIHA--NKTGKLLTFPVVAAGIVAGLA 191 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ G +G+AFQ+ DD+LD E+GK +D K T P +L ++ Sbjct: 192 GEDINNLRKAGSLIGLAFQVRDDILDVTASFEEIGKTPKKDLLADKATYPSLLGLEK 248 >gi|225677225|ref|ZP_03788218.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590749|gb|EEH11983.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 263 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 119/207 (57%), Gaps = 11/207 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y++ + K +R L +A++ + + +A AIEF+H +L+HDD+ +D+S R Sbjct: 30 MRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEFVHAYSLIHDDLPCMDNSDTR 89 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA-EGELRQLSL 150 R +++ + T+VL GD LL+ AF V+ + +++ E + +++ + G + +L Sbjct: 90 RSQLSCHKKFDEATAVLAGDALLTLAF-EVLSSLNEKRCEIIKVLSQAIGIRGMVGGQAL 148 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 D + +H++K TA LF+A+ E+ ++I + R+AL +YG+NLG+ FQ DD Sbjct: 149 DIGADFNKIKEIHLMK--TAKLFAASCEIGAIIGNAIDKQRKALYNYGINLGLIFQAKDD 206 Query: 211 VLDYRGE-----VNEMGKNIGEDFRNG 232 + DY + ++ +GK+ E++ +G Sbjct: 207 IEDYEQDKTNNLMSVLGKSEVENYIDG 233 >gi|225573687|ref|ZP_03782442.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM 10507] gi|225038980|gb|EEG49226.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM 10507] Length = 295 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 25/254 (9%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 M E+L LK E + LI + + + + + Y + +GGKRLRP++ M Sbjct: 1 MNFKEELNLKTQE-IEQLIRRYLPKEEGFASTLARAMNYSMLAGGKRLRPLMMQEVYRM- 58 Query: 58 EYRGDNHVL--LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFL 113 + G V+ A+E IHT +L+HDD+ +D+ RRG+ V+G V+ G L Sbjct: 59 -FGGTQRVIEPFMVAMEMIHTHSLIHDDLPALDNDEYRRGRETTWKVFGEDMGVISGAAL 117 Query: 114 LSQAFCMVIET-----KSQEALEALSLVAC-TLAEGELRQLSLS-----KNLDVTEEDYL 162 L+ A+ + + +++ + AL ++A T G L S+ K LD+ DY+ Sbjct: 118 LNYAYEVALSGFELTDRTERVVLALRVLAAKTGMYGMLGGQSVDVENDRKPLDLQLLDYI 177 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 + ++KT+ L A++ V +++AG +N+ +RQ K+ G +G+AFQ+ DD+LD E+ Sbjct: 178 Y--ENKTSALMEASMMVGAILAGAENTKIRQVEKAAGC-VGLAFQIEDDILDVTSTQEEL 234 Query: 222 GKNIGEDFRNGKPT 235 GK I D +N K T Sbjct: 235 GKPIHSDEKNHKTT 248 >gi|254779530|ref|YP_003057636.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Helicobacter pylori B38] gi|254001442|emb|CAX29437.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Helicobacter pylori B38] Length = 303 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 142/273 (52%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + LV A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELVKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L S +L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISTSLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D + K + +L ++ + + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLD--SAKNSFVNLLGLKKASDYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK A+ +++EN AL++T ++ Sbjct: 273 VLNDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|82542909|ref|YP_406856.1| geranyltranstransferase [Shigella boydii Sb227] gi|81244320|gb|ABB65028.1| geranyltranstransferase [Shigella boydii Sb227] gi|320186050|gb|EFW60795.1| geranyltranstransferase [Shigella flexneri CDC 796-83] gi|332098531|gb|EGJ03497.1| geranyltranstransferase [Shigella boydii 3594-74] Length = 299 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 126/252 (50%), Gaps = 20/252 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKK 269 +D + S++ L + Sbjct: 268 DDARQSLKQLAE 279 >gi|308370103|ref|ZP_07420299.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu002] gi|308370565|ref|ZP_07422005.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu003] gi|308371822|ref|ZP_07426360.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu004] gi|308372989|ref|ZP_07430673.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu005] gi|308374160|ref|ZP_07435075.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu006] gi|308375313|ref|ZP_07443508.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu007] gi|308376574|ref|ZP_07439328.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu008] gi|308377573|ref|ZP_07479700.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu009] gi|308325351|gb|EFP14202.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu002] gi|308331528|gb|EFP20379.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu003] gi|308335332|gb|EFP24183.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu004] gi|308339139|gb|EFP27990.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu005] gi|308342810|gb|EFP31661.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu006] gi|308346663|gb|EFP35514.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu007] gi|308350578|gb|EFP39429.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu008] gi|308355269|gb|EFP44120.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu009] Length = 333 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 142/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 28 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 87 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 88 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 146 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E YL V+ KT L +A+ ++ + ++G Sbjct: 147 AVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQ 206 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + G +G AF++ D++ G+ + G D TLP+ A RE+ Sbjct: 207 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMPYAL-----REQ 258 Query: 251 NFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 S + + G I +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 259 TPDTSRLRELLAGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 318 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 319 RALATLIDHAV 329 >gi|270292608|ref|ZP_06198819.1| geranyltranstransferase [Streptococcus sp. M143] gi|270278587|gb|EFA24433.1| geranyltranstransferase [Streptococcus sp. M143] Length = 291 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + NF ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALENFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALQVA 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + ++ + SQ + + LSL + +L EGE + LSL E + Sbjct: 117 PYALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLK------ELQTI 170 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 H +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 171 HA--NKTGKLLAYPFQAAAIIAELAPEMQAKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L G + K F T++ +E + + Sbjct: 229 KTPQKDLQAEKSTYPALL----GLEEAKAFCNQTLDQANEKLEEIAQ 271 >gi|325498296|gb|EGC96155.1| geranyltranstransferase [Escherichia fergusonii ECD227] Length = 299 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 129/265 (48%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAGASGIGG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKAQDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|281177591|dbj|BAI53921.1| geranyltranstransferase [Escherichia coli SE15] Length = 299 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 129/265 (48%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + AL D Sbjct: 268 DDARQSLKQLTEQSFDTSALEALAD 292 >gi|262281218|ref|ZP_06059000.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202] gi|262257449|gb|EEY76185.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202] Length = 303 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 121/235 (51%), Gaps = 19/235 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA L A A+E IH +L HDD+ Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQSNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ--------EALEA 132 +D+ LRRG+ + +G T++L GD L S AF + + + Q + ++ Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQI 153 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSV 190 L+ + + G++ L ++ +T+++ ++ ++KT L AA+ + ++ +G ++ Sbjct: 154 LATASSKMVSGQVLDLQ-AEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAI 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + L+ YG +G+AFQ++DD+LD +GK G+D + K T P ++ ++ Sbjct: 213 PK-LRQYGQTIGLAFQVLDDILDIISSTEALGKTAGKDEQVQKSTYPALMGLEQA 266 >gi|323938606|gb|EGB34855.1| polyprenyl synthetase [Escherichia coli E1520] Length = 299 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 76/263 (28%), Positives = 127/263 (48%), Gaps = 16/263 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGM 199 + + LD+ E D L I + KT L AA+ + +L AG + L Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGCRALPVLDKYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I+D Sbjct: 214 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----IDD 269 Query: 260 GKISVENLKKAFIIMRENRALVD 282 + S++ L + + AL D Sbjct: 270 ARQSLKQLAEQSLDTSALEALAD 292 >gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 295 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 16/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L A L ++ +CA+E IH +L+HDD+ Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGASCAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---------ETKSQ--EALEALSLVAC 138 LRRG+ + ++L GD L S AF ++ ET+ Q L A + A Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAG 152 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSY 197 + + S+ LD +Y+H + KT L A++ + +L +G + R AL+ Y Sbjct: 153 MVGGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASGQADQPRLDALQIY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 211 ARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|146321614|ref|YP_001201325.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33] gi|145692420|gb|ABP92925.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33] Length = 235 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 115/224 (51%), Gaps = 13/224 (5%) Query: 10 KDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLL 67 + +E+V +IL + + +V+Y + + GK LR L L A M E + + + Sbjct: 14 RGLEEVKSIILSEMMVLHPAVTAKIVEY-VEAPGKYLRAGLCLLFAQMTEGKISRSKLYF 72 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +E +H ATL+HDDV+D + RRG AA + N+ ++ GD+LL A+ + K Sbjct: 73 AAHLEVLHLATLIHDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLL--AYSSRLFGKGL 130 Query: 128 EALEA----LSL----VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 LE L L + T+ GEL QL + ++T + YL I+ KTA LF A ++ Sbjct: 131 RLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQL 190 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 S + G G LG+AFQL DD++DY+ +V E GK Sbjct: 191 GSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAESGK 234 >gi|91776484|ref|YP_546240.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT] gi|91710471|gb|ABE50399.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT] Length = 296 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 15/239 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + GGKR+R +L A + + + A A+E IH +L+HDD+ Sbjct: 35 EAMRYAVLGGGKRVRALLAHAAGELCGAAPEKVDIAAAAVELIHAYSLVHDDMPCMDDDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACT-----L 140 LRRGK + + + T++LVGD L + AF + T LE +SL+A + Sbjct: 95 LRRGKPSCHKQYDDATALLVGDALQTLAFQSLATPGLCTDPGRQLEMVSLLAIASGSRGM 154 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSYG 198 A G+ L S+ K L+ +E +Y+H+ KT L AA + + A + R A+ Y Sbjct: 155 AGGQAIDLDSVGKALEQSELEYMHI--HKTGALIRAAALLGAHCANDLDQERLHAIDHYA 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+VDD+LD + +GK G+D ++ KPT IL + K + Sbjct: 213 QAIGLAFQVVDDILDAEADSETLGKTAGKDAQSDKPTYVTILGIDHAKQLAKELLDGAL 271 >gi|292492812|ref|YP_003528251.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4] gi|291581407|gb|ADE15864.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4] Length = 296 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 121/240 (50%), Gaps = 27/240 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDV--VD 86 + ++Y + GGKRLRP+L +T + L G + +L A A+E IH +L+HDD+ +D Sbjct: 35 EAMRYAVLGGGKRLRPLLVYSTGMAL---GASEAVLDAPASAVELIHAYSLVHDDLPSMD 91 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVACT--- 139 + LRRG+ + T++LVGD L S AF ++ ++ S ++ L L+A Sbjct: 92 NDDLRRGRPTCHKAFDEATALLVGDALQSLAFRILADSTSGLPASNQIKMLMLLAEAASS 151 Query: 140 --LAEGELRQL-SLSKNLDVTEEDYLHVIKS----KTAVLFSAALEVSSLIAGVQNSVRQ 192 +A G+ L S+ + L + E + +H +K+ + +VL A + + + Sbjct: 152 RGMAGGQAIDLESVGQLLTLAELETMHRLKTGALIRASVLLGAWCHPT-----IDPHTLE 206 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L + +G+AFQ+ DDVLD + +GK G D KPT P +L + + ++ Sbjct: 207 NLDRFAQCIGLAFQIQDDVLDVESDTATLGKPQGSDRARDKPTYPSLLGLPQAKAKAQSL 266 >gi|114326884|ref|YP_744041.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1] gi|114315058|gb|ABI61118.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1] Length = 309 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/233 (31%), Positives = 119/233 (51%), Gaps = 16/233 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTATLLHDDVVDDSA- 89 + ++Y + +GGKRLR L L +A + + ++ V A ++E +H +L+HDD+ Sbjct: 48 EAMRYAVLNGGKRLRAFLVLESAALFDGAAAESGVRAAASVEMLHAYSLVHDDLPAMDDD 107 Query: 90 -LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-----LSLVACTLAEG 143 LRRGK +A + T++L GD L + AF ++ + + A L+L A+G Sbjct: 108 DLRRGKPSAHRAFDEATAILAGDALQTSAFELLADAATHPDPAARCALVLALARAVGADG 167 Query: 144 E-----LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + S + L + LH +K+ + +SA E ++ + ++AL SYG Sbjct: 168 MVGGQMIDMASEGRALTAEQVGRLHALKTGRLIQYSA--EAGGILGAATPAQQEALASYG 225 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +LG AFQ+VDD+LD G E+GK G+D GK T +L + G KRE Sbjct: 226 RDLGAAFQIVDDILDTEGTAEELGKTAGKDAAAGKATFVAVLGIE-GAKREAQ 277 >gi|307595824|ref|YP_003902141.1| polyprenyl synthetase [Vulcanisaeta distributa DSM 14429] gi|307551025|gb|ADN51090.1| Polyprenyl synthetase [Vulcanisaeta distributa DSM 14429] Length = 296 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 99/182 (54%), Gaps = 3/182 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + I + GK +RP L L A L + +L A ++E IHTA+LL DD++D +RRG Sbjct: 47 HYIRNRGKLIRPTLVLLMAYALGNGSGLERAILPAASVELIHTASLLQDDIMDQQRIRRG 106 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 ++G T++L D ++++A I + + + L + LA G+ + LS Sbjct: 107 VKTPYSIYGPHTAMLASDLIIAKAVEYAIRSGDNDIVFELLNSSIKLAIGQSFESELSSR 166 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ-NSVRQALKSYGMNLGIAFQLVDDVL 212 +VT +DYL +I KTA L +++ V + V+ + V ++ G +GIAFQ+ DDV+ Sbjct: 167 ANVTIDDYLRLIYYKTASLIESSMVVGAYSVNVKDDEVISKIRDVGRFVGIAFQVRDDVI 226 Query: 213 DY 214 DY Sbjct: 227 DY 228 >gi|255318787|ref|ZP_05360013.1| geranyltranstransferase [Acinetobacter radioresistens SK82] gi|262378949|ref|ZP_06072106.1| geranyltranstransferase [Acinetobacter radioresistens SH164] gi|255304043|gb|EET83234.1| geranyltranstransferase [Acinetobacter radioresistens SK82] gi|262300234|gb|EEY88146.1| geranyltranstransferase [Acinetobacter radioresistens SH164] Length = 302 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/235 (29%), Positives = 117/235 (49%), Gaps = 20/235 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA L A AIE IH +L HDD+ Sbjct: 34 EPLKSAVYHAVMLGGKRVRPALCYATAALQPNSNFAAVRRAAVAIEMIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----------CMVIETKSQEALEAL 133 +D+ LRRG+ + +G T++L GD L S AF V + ++ L Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDQGVAVDQAVVLRQMQIL 153 Query: 134 SLVACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSV 190 + + + G++ L K +D ++ + +H ++KT L AA+ ++ ++ G ++ Sbjct: 154 ATASSKMVCGQVMDLQAEGKQVDQSQLENIH--RNKTGALIQAAIMMAAVTIFNGTDQAI 211 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 Q L+ YG +G+AFQ+ DD+LD E +GK G+D + K T P ++ ++ Sbjct: 212 PQ-LRQYGQAIGLAFQVQDDILDIVSETEVLGKTAGKDEQVEKSTYPALMGLEQA 265 >gi|312112938|ref|YP_004010534.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311218067|gb|ADP69435.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 296 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 10/231 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y GGKR RP L + +A + + + A+E IH +L+HDD+ +D+ Sbjct: 36 DAMRYGTLGGGKRFRPFLVIESAALFGVPVEKALNAGSALECIHCYSLVHDDLPAMDNDD 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE--TKSQEALEA-----LSLVACTLAE 142 LRRG+ + + T++L GD LL+ AF ++ T A+ A L+ + Sbjct: 96 LRRGRPTVHKAFDDATAILAGDTLLTVAFEIIAHESTHPNPAVRAALGLELARASGGAGM 155 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + L L + E + +++ KT L + ++ + ALK+YG L Sbjct: 156 AGGQMLDLMAPGKMLGEADIRTLQAMKTGALITYGCVAGGILGEASKAELAALKTYGDAL 215 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 G AFQL DD+LD G+ +GK G+D GK TL +L + + +N Sbjct: 216 GAAFQLADDLLDAEGDAAVVGKATGKDQEAGKGTLVSLLGLEAAHAKLQNL 266 >gi|297153619|gb|ADI03331.1| hypothetical protein SBI_00210 [Streptomyces bingchenggensis BCW-1] Length = 466 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 116/222 (52%), Gaps = 18/222 (8%) Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 ++DD+ +RRG+ +G+ ++L GD+LL++ CM + + + +A TL + Sbjct: 1 MIDDAQVRRGRSTTNAKYGDAIALLTGDYLLAR--CM--QAAASLGASPMMSMAETLIDV 56 Query: 144 ELRQLSLSKNL-DV--TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + Q+ S L D TEEDYL + KTA L A + +L N V+ AL+S+G N Sbjct: 57 CVGQMLESSQLFDPLRTEEDYLTAVSGKTARLMRTATTMGALQCNASNDVQDALESFGHN 116 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 LG+AFQ+ DD+LD E E GK + +D NG TLPVI A + R T+ + Sbjct: 117 LGMAFQIWDDILDICSE--ETGKQVAKDLLNGVYTLPVIYAIEDFPDR----LLPTLCEQ 170 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQK-AKDSLRCL 301 +S + ++ ++ E+ A+ RA Q+ D+LR + Sbjct: 171 PLSADRCQEILSLIHESGAI----SRAADVAQRHVTDALRAV 208 >gi|332297374|ref|YP_004439296.1| Polyprenyl synthetase [Treponema brennaborense DSM 12168] gi|332180477|gb|AEE16165.1| Polyprenyl synthetase [Treponema brennaborense DSM 12168] Length = 348 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 22/229 (9%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDD 83 +E + L+ GGKR RP+L A E + + +EF+HTA+L+HDD Sbjct: 45 IEQLSSPCAALLKLGGKRWRPLLLTLCAAAAAGTEESPEAAYEITPLVEFVHTASLIHDD 104 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFL-LSQAFCMV-IETKSQEALEALSLVACTLA 141 + D + RRG AA + WG T++ G +L + A C+ + ++ L L A Sbjct: 105 IEDCADTRRGMPAAHITWGIDTAINAGSWLYFTAAACLTNVPLPAERKLALYRLYA---- 160 Query: 142 EGELRQLSLSKNLDV----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 ELR+L L + +D+ + ++Y +++ KT L + A + +L+ G Sbjct: 161 -EELRRLHLGQAMDIAWHKDNTALPSVQEYEAMVRMKTGTLAALAAKAGTLVGGGTAEQE 219 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + ++G+ FQ++DDVL+ +GK G+D GK +LPV++ Sbjct: 220 SVMGNAAADIGVGFQILDDVLNL--TTGNIGKKRGDDIVEGKKSLPVLI 266 >gi|320333936|ref|YP_004170647.1| Geranyltranstransferase [Deinococcus maricopensis DSM 21211] gi|319755225|gb|ADV66982.1| Geranyltranstransferase [Deinococcus maricopensis DSM 21211] Length = 329 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 11/248 (4%) Query: 12 MEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-----GDNHV 65 +++V+ L+ +++++ D+++ GGK +R L LA+A R + + Sbjct: 6 LDRVHTLLPAHHARPEIQLLYDMMRDYPARGGKGIRAELLLASARAHGVREGTPAWEQAL 65 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA +E L+HDD+ DDS RRG+ A G ++ GD L + + V Sbjct: 66 WLAATVELFQNWVLIHDDIEDDSEERRGQPALHRTHGVPLALNAGDALHAYMWAAVARAN 125 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKN--LDVTEEDYLHVIKSKTAVL-FSAALEVSSL 182 A E + + AEG+ L+ ++ D+T DYL +++ KTA L + +L Sbjct: 126 VPGAFEEVLQMIHRTAEGQHVDLAWVEHGRWDLTPADYLDMVRLKTAYYTVVVPLRLGAL 185 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AG S A ++ G+ LG AFQ+ DDVL+ + GK IG D + GK TL V+ Sbjct: 186 AAGATPSA--AFEAAGVALGAAFQIRDDVLNLTADAGVYGKEIGGDLQEGKRTLMVLDWL 243 Query: 243 QRGTKREK 250 +R E+ Sbjct: 244 ERAPASER 251 >gi|117509|sp|P21684|CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; AltName: Full=Farnesyltranstransferase gi|216682|dbj|BAA14124.1| crtE [Pantoea ananatis] gi|325559605|gb|ADZ30887.1| geranylgeranyl pyrophosphate synthase [MoClo level 2 destination vector pL2-1] gi|325559616|gb|ADZ30895.1| geranylgeranyl pyrophosphate synthase [MoClo end-linker vector pELR-1] Length = 302 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 119/226 (52%), Gaps = 22/226 (9%) Query: 27 VEMIPDVVKYLIFSG----GKRLRPMLTLATA--LMLEYRGDNHVLLACAIEFIHTATLL 80 VE DVV + G GKR+RPML L TA L D + LACA+E +H A+L+ Sbjct: 33 VEGERDVVGAAMREGALAPGKRIRPMLLLLTARDLGCAVSHDGLLDLACAVEMVHAASLI 92 Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSL 135 DD+ +DD+ LRRG+ +G ++L LLS+AF ++ + L A+S Sbjct: 93 LDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSKAFGVIADADGLTPLAKNRAVSE 152 Query: 136 VACT-----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L +G+ + LS + + E L KT+ LF A+++++S++A + Sbjct: 153 LSNAIGMQGLVQGQFKDLS-EGDKPRSAEAILMTNHFKTSTLFCASMQMASIVANASSEA 211 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 R L + ++LG AFQL+DD+ D + + GK+ +D GK TL Sbjct: 212 RDCLHRFSLDLGQAFQLLDDLTDG---MTDTGKDSNQD--AGKSTL 252 >gi|90410905|ref|ZP_01218919.1| putative geranyltranstransferase [Photobacterium profundum 3TCK] gi|90328118|gb|EAS44429.1| putative geranyltranstransferase [Photobacterium profundum 3TCK] Length = 300 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 16/240 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +KY GGKR RP LT T ML + A A+E IH +L+HDD+ +DD L Sbjct: 39 TMKYGTLLGGKRARPFLTYITGQMLGAECADLDTPAAAVECIHAYSLIHDDLPAMDDDEL 98 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK------SQEALEALSLVACTLAEGE 144 RRG + + ++L GD L + AF ++ + + +Q L + A G Sbjct: 99 RRGHPTCHIAFDEALAILAGDALQTLAFEILADGQLSDDGNTQRIAMIKELAQASGAAGM 158 Query: 145 LRQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYG 198 +L K +D+ + + +H K KT L A+ + +L AG + +V L + Sbjct: 159 CVGQALDLEAEGKRVDLQKLEAIH--KHKTGALIRCAVRLGALAAGQKGVAVLPQLNQFA 216 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L + ++ + ++ + Sbjct: 217 DAIGLAFQVQDDILDVTSDTETLGKPQGSDLALDKSTYPALLGLEGAQQKTQQLYQEALQ 276 >gi|85058635|ref|YP_454337.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans'] gi|84779155|dbj|BAE73932.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans'] Length = 300 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 116/235 (49%), Gaps = 24/235 (10%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKRLRP L T + + A AIE IH +L+HDD+ +D+ ALRRG Sbjct: 44 GGKRLRPFLVYQTGRLFGLTAASLDAPAAAIECIHAYSLIHDDLPAMDNDALRRGLPTCH 103 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALS-LVACTLAEGELRQLSLSK 152 + +G T++L GD L + AF ++ + + Q+ L+ +S L A + A+G + L + Sbjct: 104 VKFGETTAILAGDALQTLAFSILADVEMPKVSPQDRLQMISALAAASGADG----MCLGQ 159 Query: 153 NLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMNLG 202 LD+ E + +H + KT L +A+ + L AG + + L + +G Sbjct: 160 ALDLEAEGQQVSAARLETIH--RHKTGALIRSAVRMGVLAAGERGGPALRYLDRFAAAIG 217 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +AFQ+ DD+LD G+ GK G D GK T P +L + ++ + ++ Sbjct: 218 LAFQVQDDILDVVGDSQTTGKRQGADQALGKSTYPALLGLDMARAKAQDLYHESL 272 >gi|327396572|dbj|BAK13993.1| geranylgeranyl pyrophosphate synthetase CrtE [Pantoea ananatis AJ13355] Length = 302 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 119/226 (52%), Gaps = 22/226 (9%) Query: 27 VEMIPDVVKYLIFSG----GKRLRPMLTLATA--LMLEYRGDNHVLLACAIEFIHTATLL 80 VE DVV + G GKR+RPML L TA L D + LACA+E +H A+L+ Sbjct: 33 VEGERDVVGAAMREGALAPGKRIRPMLLLLTARDLGCAVSHDGLLDLACAVEMVHAASLI 92 Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSL 135 DD+ +DD+ LRRG+ +G ++L LLS+AF ++ + L A+S Sbjct: 93 LDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSKAFGVIADADGLTPLAKNRAVSE 152 Query: 136 VACT-----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L +G+ + LS + + E L KT+ LF A+++++S++A + Sbjct: 153 LSNAIGMQGLVQGQFKDLS-EGDKPRSAEAILMTNHFKTSTLFCASMQMASIVANASSEA 211 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 R L + ++LG AFQL+DD+ D + + GK+ +D GK TL Sbjct: 212 RDCLHRFSLDLGQAFQLLDDLTDG---MTDTGKDSNQD--AGKSTL 252 >gi|296101542|ref|YP_003611688.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056001|gb|ADF60739.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 299 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 32/243 (13%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMHYGALLGGKRLRPFLVYATGNMFGISDTTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVACTLA--- 141 LRRG+ + +G ++L GD L + AF ++ E ++ L +S +A Sbjct: 94 LRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMAEVSDRDRLAMVSELAMASGVAG 153 Query: 142 ---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 E E RQ+ NL+ E + H KT L AA+ + +L AGVQ R+ Sbjct: 154 MCGGQALDLEAEGRQV----NLEQLERIHRH----KTGALIRAAVRLGALSAGVQG--RK 203 Query: 193 ALK---SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ ++ Sbjct: 204 ALPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQAQRKA 263 Query: 250 KNF 252 ++ Sbjct: 264 RDL 266 >gi|291619711|ref|YP_003522453.1| CrtE [Pantoea ananatis LMG 20103] gi|291154741|gb|ADD79325.1| CrtE [Pantoea ananatis LMG 20103] Length = 311 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 119/226 (52%), Gaps = 22/226 (9%) Query: 27 VEMIPDVVKYLIFSG----GKRLRPMLTLATA--LMLEYRGDNHVLLACAIEFIHTATLL 80 VE DVV + G GKR+RPML L TA L D + LACA+E +H A+L+ Sbjct: 42 VEGERDVVGAAMREGALAPGKRIRPMLLLLTARDLGCAVSHDGLLDLACAVEMVHAASLI 101 Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSL 135 DD+ +DD+ LRRG+ +G ++L LLS+AF ++ + L A+S Sbjct: 102 LDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSKAFGVIADADGLTPLAKNRAVSE 161 Query: 136 VACT-----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L +G+ + LS + + E L KT+ LF A+++++S++A + Sbjct: 162 LSNAIGMQGLVQGQFKDLS-EGDKPRSAEAILMTNHFKTSTLFCASMQMASIVANASSEA 220 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 R L + ++LG AFQL+DD+ D + + GK+ +D GK TL Sbjct: 221 RDCLHRFSLDLGQAFQLLDDLTD---GMTDTGKDSNQD--AGKSTL 261 >gi|168700708|ref|ZP_02732985.1| polyprenyl synthetase [Gemmata obscuriglobus UQM 2246] Length = 599 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 71/232 (30%), Positives = 118/232 (50%), Gaps = 23/232 (9%) Query: 41 GGKRLRPMLTLATALMLE----------YRGDNHV-LLACAIEFIHTATLLHDDVVDDSA 89 GGKR RP +TLA L+ + +HV A AIE H A+L+HDD+ DD A Sbjct: 281 GGKRSRPFITLAAYDALKGAPATLADSGWELPDHVKRAAVAIEAFHKASLVHDDIEDDDA 340 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETK------SQEALEALSLVACTLAE 142 R G +G T++ VGD+L+ + C+ + K + + L+ L+ L+E Sbjct: 341 YRYGAETLHRTYGVGTAINVGDYLIGVGYKCVSRDRKALGAEVAADVLDKLADAHIKLSE 400 Query: 143 GELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ +L +K+ +T D L + KT+ F AAL +AG + + + + N Sbjct: 401 GQGAELLWREAKDKSLTTLDALKIYALKTSPAFEAALYTGVRLAGEATAYEKLIADFSRN 460 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNI-GEDFRNGKPTLPVILAFQRGTKREKN 251 +G+AFQ+++D+ D+ G +E K + G+D +PTL + LA + T ++ Sbjct: 461 VGVAFQILNDIKDWTG--DEDNKLVSGQDVLAARPTLLLALALEGSTPAQRE 510 >gi|146310549|ref|YP_001175623.1| geranyltranstransferase [Enterobacter sp. 638] gi|145317425|gb|ABP59572.1| farnesyl-diphosphate synthase [Enterobacter sp. 638] Length = 299 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 22/265 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 + Y GGKRLRP L AT M + A A+E IH +L+HDD+ L Sbjct: 35 AMHYGALLGGKRLRPFLVYATGNMFGISSNTLDAPAAAVECIHAYSLIHDDLPAMDDDDL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVACTLAEGEL 145 RRG+ + +G ++L GD L + AF ++ IE ++ L +S +A +A G + Sbjct: 95 RRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMIEVADRDRLAMVSELA--MASG-V 151 Query: 146 RQLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSY 197 + + LD+ E + + + KT L AA+ + +L AG + S L Y Sbjct: 152 AGMCGGQALDLEAEGHQVNLEQLERIHRHKTGALIRAAVRLGALSAGERGSKALPILDRY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ ++ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQAQQKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S+ L + AL D Sbjct: 268 DDARQSLNALAAQSLDTSALEALAD 292 >gi|308177142|ref|YP_003916548.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117] gi|307744605|emb|CBT75577.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117] Length = 369 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 79/259 (30%), Positives = 118/259 (45%), Gaps = 42/259 (16%) Query: 42 GKRLRPMLTLATALMLEYR---GDNH---VLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GK +RP L +ML YR G N + L CA E +H A L+HDDVVD +RRGK Sbjct: 69 GKLMRPSL-----VMLGYRAFGGGNEARAIDLGCAFELLHAALLIHDDVVDRDFMRRGKA 123 Query: 96 AARLVW-----------------GNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALS 134 ++ GN ++ GD L+S+A + + S+ +E Sbjct: 124 TISALYRDQASASGRSLADAEHAGNSVGIIAGDLLISEAIKLAARAAAGSDSEAGVEQAF 183 Query: 135 LVACTLA-EGELRQLSLS-KNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVR 191 A A GEL L S + T L + + KTA F L+ +L+AG Sbjct: 184 FEAIEQAGAGELEDLLYSLGSAAATTSQVLRMEQMKTAAYSFQLPLQAGALLAGAHPGQA 243 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A+ + G LG+A+Q++DDVL G+ + GK+I D R K T+ + LA +K Sbjct: 244 EAIGAVGCQLGVAYQIIDDVLGTFGDPAQTGKSIESDLREFKSTILLALA-----SEDKE 298 Query: 252 FWK--STINDGKISVENLK 268 F S +GK+ ++ Sbjct: 299 FAALLSGFREGKVDAGRIR 317 >gi|161830715|ref|YP_001597105.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331] gi|212212363|ref|YP_002303299.1| dimethylallyltransferase [Coxiella burnetii CbuG_Q212] gi|161762582|gb|ABX78224.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331] gi|212010773|gb|ACJ18154.1| dimethylallyltransferase [Coxiella burnetii CbuG_Q212] Length = 267 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 103/209 (49%), Gaps = 9/209 (4%) Query: 13 EKVNFLILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 E++N L I D+ P + + Y + SGGKR+RP+ T AT E A Sbjct: 9 ERINHK-LGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAA 67 Query: 69 CAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 CAIE +H +L+H +DD RRGK + + T++L GD L AF ++ K+ Sbjct: 68 CAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDKN 127 Query: 127 QEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + L+ +L +QL L KN + T E V + KT LFS A+E+ +L AG Sbjct: 128 TRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAG 187 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLD 213 + R Q L+ G +G+ FQ DD+ D Sbjct: 188 CLDEKRLQKLRKLGATVGLIFQWQDDLAD 216 >gi|325276613|ref|ZP_08142352.1| polyprenyl synthetase [Pseudomonas sp. TJI-51] gi|324098253|gb|EGB96360.1| polyprenyl synthetase [Pseudomonas sp. TJI-51] Length = 295 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 84/291 (28%), Positives = 137/291 (47%), Gaps = 46/291 (15%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 ++E + ++Y + +GGKR+RP+L A L + ACA+E IH +L+HDD+ Sbjct: 27 ELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLP 86 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEA-------LEALSL 135 LRRG+ + ++L GD L S AF +++ S +A ++AL+ Sbjct: 87 AMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPHLSPQADSVRLAMVQALAT 146 Query: 136 VA--CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 A + G+ L S+ LD ++H + KT L A++ + +L A + +Q Sbjct: 147 AAGPAGMVGGQAIDLGSVGLKLDQRALAFMH--RHKTGALIEASVRLGAL-ASARAGQQQ 203 Query: 193 --ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL++Y +G+AFQ+ DD+LD G+ +GK G D KPT P +L Sbjct: 204 LDALQTYAQAIGLAFQVQDDILDVEGDTATLGKRQGADIARDKPTYPALLGL-------- 255 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + KA+ I ++ALV E +G+KA + LR L Sbjct: 256 ---------------DAAKAYAIELRDQALVALE----GFGEKA-EPLRAL 286 >gi|320528396|ref|ZP_08029558.1| putative geranyltranstransferase [Solobacterium moorei F0204] gi|320131310|gb|EFW23878.1| putative geranyltranstransferase [Solobacterium moorei F0204] Length = 278 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 77/248 (31%), Positives = 124/248 (50%), Gaps = 19/248 (7%) Query: 27 VEMIPDVVK-----YLIFSGGKRLRPMLTLATALMLEYRGDNHV--LLACAIEFIHTATL 79 ++ +PD Y + +GGKR+RP L L T L Y D + ACA+E IHT +L Sbjct: 11 IKSLPDSTTKSAMLYSLTAGGKRIRPQL-LYTVLK-GYSVDPEIGNPFACALEMIHTYSL 68 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSL 135 +HDD+ +D+ LRRG + T++L GD LL+ AF + + S L+ +S+ Sbjct: 69 IHDDLPAMDNDDLRRGLPTCHKQFNEATAILAGDGLLTYAFEIAAGSNENSGTVLKCISI 128 Query: 136 VACTLAEGEL---RQLSLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVR 191 ++ + +QL L + D L I + KT L +A L ++ +A + + Sbjct: 129 LSKMAGPSGMVYGQQLDLEAEYKEIDWDMLQRIHEHKTGCLLTAPLLIACTLAKHEEDI- 187 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 A K G +LG+AFQ+ DD+LD E GK+ D +N K T IL +R + + Sbjct: 188 SAWKKIGFSLGLAFQIQDDILDIELTAKEFGKS-NSDQKNHKGTSVSILGIERAKEVMND 246 Query: 252 FWKSTIND 259 +++ I + Sbjct: 247 LYQTAIEE 254 >gi|170290882|ref|YP_001737698.1| polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174962|gb|ACB08015.1| Polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 289 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 85/285 (29%), Positives = 141/285 (49%), Gaps = 61/285 (21%) Query: 41 GGKRLRPMLTLATALMLEY--RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GGKR+RP + L+ E G + L A A+E IHTA+L+HDD++DDS RRG + Sbjct: 59 GGKRIRPAILF---LINEACGGGGSPELAAAAVELIHTASLIHDDIIDDSDSRRGIPSFH 115 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD-VT 157 + G + ++L+ DF+LS +V + + + LS ++ GE+ ++ L + D ++ Sbjct: 116 IKHGTEMAILIADFILSIVLEIVSKYEDKRIGRLLSEATKLMSIGEMMEVILLRRGDPIS 175 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY--R 215 EDYL+V+K KTA LF A + +LIAG ++ + + + YG+ LG+++Q+ DD+LD+ + Sbjct: 176 VEDYLNVLKYKTASLFQTASSLGALIAG-RDDLYEEMGLYGLYLGLSYQIRDDLLDWGEK 234 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 GE+ + K ND + +E+L Sbjct: 235 GEITYLLKG---------------------------------NDVREFLEDL-------- 253 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A Y KA D L +PDS K+ L E+ + ++R Sbjct: 254 -----------ALQYSMKAMDKLNFIPDSPQKRILREIAAYSIER 287 >gi|291520797|emb|CBK79090.1| Geranylgeranyl pyrophosphate synthase [Coprococcus catus GD/7] Length = 303 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 50/268 (18%) Query: 20 LKRICSDVE-----MIPD----------VVKYLIFSGGKRLRPMLTLATALMLEYR--GD 62 LK +D+E M+P+ ++Y + +GGKR+RP+L T YR G Sbjct: 7 LKEKTADIEKLLERMLPEEAGLQKTIFSAMRYSLMAGGKRIRPLLIAET-----YRFFGG 61 Query: 63 NHVLLA----CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + LA AIE IHT +L+HDD+ +D+ RRG++ + V+G ++L GD LL+ Sbjct: 62 TDMALAEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRLTSHKVYGEAMAILAGDALLNY 121 Query: 117 AFCMVIETKSQ------------EALEALSLVACT-----LAEGELRQLSLSKNLDVTEE 159 AF ET S+ ++A +++ + G++ + L+ + E+ Sbjct: 122 AF----ETASKAMDHARDDEELLRVMKAFRILSSKPGINGMIGGQVVDVELTGK-PIPEK 176 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 + + KT L AA+ + + +AG + A++ ++G+AFQ+ DDVLD G Sbjct: 177 TLRFIFELKTGALIEAAMMIGAQLAGASDEQIAAVEKAAGDIGMAFQIQDDVLDVIGNEA 236 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +GK + D +N K T + ++ K Sbjct: 237 LLGKPVHSDEKNEKTTWVTVYGLEQAKK 264 >gi|323359581|ref|YP_004225977.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum StLB037] gi|323275952|dbj|BAJ76097.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum StLB037] Length = 355 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 81/258 (31%), Positives = 122/258 (47%), Gaps = 27/258 (10%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDVVDDSALRRG---- 93 GGKR RP+L ++ L+ L A A E +HTA ++HDDV+D RRG Sbjct: 49 GGKRFRPLLVVSAFDTLDGPDIARPALYQVAAAFELLHTAFVVHDDVIDHDVERRGMPNV 108 Query: 94 -------------KVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSLV 136 A + G+ +L GD LL +A +V I T + L L Sbjct: 109 GGEFRSRGTERGADAAGAALLGDAAGILAGDLLLHEAARLVAMAEIPTDLRRELLLLVED 168 Query: 137 ACTL-AEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQA 193 A + A GEL + + + D+ + L KTAV FSA LE +++AG + VR A Sbjct: 169 AVLVSAAGELADVENAVSAGDIDADTILRTTHDKTAVYSFSAPLEAGAVLAGAEAPVRHA 228 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L+ +G LG+A+QLVDD++ G GK+ G D R K T ++LA + T E + Sbjct: 229 LQRFGQRLGLAYQLVDDLIGAFGSAATAGKDEGSDLREAKKTHLIVLARESETWPEVSDA 288 Query: 254 KSTINDGKISVENLKKAF 271 + + G +++ + A Sbjct: 289 LANAHTGPVAIRAAQTAL 306 >gi|306836504|ref|ZP_07469475.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726] gi|304567594|gb|EFM43188.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726] Length = 359 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 80/255 (31%), Positives = 117/255 (45%), Gaps = 27/255 (10%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH----VLLACAIEFIHTAT 78 I + V ++ + GGKR+RPM A + RG + A ++EFI Sbjct: 32 IGAPVSTAMSFLESFVLDGGKRVRPMYAWA-GYLAAGRGSESPEAMLRAASSLEFIQACA 90 Query: 79 LLHDDVVDDSALRRGKV-----AARL-----------VWGNQTSVLVGDFLLSQAFCMVI 122 L+HDD++D S RRGK A RL +G ++LVGDF L A M Sbjct: 91 LIHDDIIDASNTRRGKPTVHREAERLHRESDFLGDPEFFGTSVAILVGDFALVYAEDMFQ 150 Query: 123 ETK-SQEAL----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAA 176 ++ S EAL E + + G+L +SL + V + KTA Sbjct: 151 DSGLSPEALQRAREPWRGMRTEVLGGQLLDISLEAAGSESVALSNSVNRYKTAAYTIERP 210 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 L + + IAG + + A + YG ++GIA+QL DD L G+ GK G+D R GK T Sbjct: 211 LHLGAAIAGAREELISAFRGYGHDIGIAYQLRDDQLGVFGDPAITGKPAGDDLREGKRTE 270 Query: 237 PVILAFQRGTKREKN 251 + LA QR +R+ + Sbjct: 271 LLALALQRADERDPS 285 >gi|325128970|gb|EGC51821.1| geranyltranstransferase [Neisseria meningitidis N1568] Length = 249 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 14/230 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L+R IP + ++Y GGKRLRPML LA + + E + AIE Sbjct: 20 LLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEM 79 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + +G ++L GD L +QAF ++ A Sbjct: 80 IHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLSRPTELPAAR 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVT-------EEDYLHVIKSKTAVLFSAALEVSSL-I 183 L++++ G ++ + +D+ + D + KT L AA+ + ++ Sbjct: 140 QLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSC 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + L +Y LG+AFQ++DDVLD + +G G+D N K Sbjct: 200 PNLSEDSLAVLDAYAAKLGLAFQVIDDVLDCDADTATLGFTAGKDADNDK 249 >gi|323965104|gb|EGB60563.1| polyprenyl synthetase [Escherichia coli M863] gi|327254743|gb|EGE66359.1| geranyltranstransferase [Escherichia coli STEC_7v] Length = 299 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E +H +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECVHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIGG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPILDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKAQDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|302536833|ref|ZP_07289175.1| polyprenyl synthetase [Streptomyces sp. C] gi|302445728|gb|EFL17544.1| polyprenyl synthetase [Streptomyces sp. C] Length = 290 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 6/253 (2%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEAL 130 E H TLLHDD++D RRG+ A V+G ++L GD +++ A ++ E A Sbjct: 38 ELAHNFTLLHDDIIDRDVRRRGRPTAWTVFGTPHAILAGDAMMALALRLLAEDPHPASAR 97 Query: 131 EALSLVACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + L AC L EG+ + + V+ ++ L + +KT L A + +L AG Sbjct: 98 ASARLAACVVELCEGQQADCAFEERAHVSLDECLTMAAAKTGALLGCACALGALYAGAGP 157 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +A+ ++G G+AFQL+DD++ G+ GK G D K +LPV+ A GT+ Sbjct: 158 EEVEAVDAFGREAGLAFQLIDDLIGIWGDPGHTGKPAGADLLARKKSLPVVAALTSGTEA 217 Query: 249 EKNFWKSTINDGKISVENLKKAF-IIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + + G + +++ +A + R + A G+ ++ R +PD + Sbjct: 218 GEEL--ALLYAGPLKEDDVSRAARAVERAGGRDWAQAHAADRMGRAVQELSRAVPDLAAA 275 Query: 308 KSLMEVVDFCLQR 320 L+ + +F +R Sbjct: 276 GGLLALAEFVTRR 288 >gi|219684533|ref|ZP_03539476.1| octaprenyl-diphosphate synthase [Borrelia garinii PBr] gi|219671895|gb|EED28949.1| octaprenyl-diphosphate synthase [Borrelia garinii PBr] Length = 347 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 115/221 (52%), Gaps = 22/221 (9%) Query: 37 LIFSGGKRLRPMLT--LATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRG 93 +I GGKR+RPM+ LA AL L+ + D + L+ +E H+ +L+ DD+ D+S RRG Sbjct: 53 IINRGGKRIRPMIMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIEDNSLKRRG 112 Query: 94 KVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 A L++G S+ G+ + L K + L TL+ L L Sbjct: 113 GSAIHLIYGTDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLS-----NLHLG 167 Query: 152 KNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + +D+ + ++Y+ +++ KTA LF A ++++I ++ ++ ++ + LG Sbjct: 168 QGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKIYSTF-LKLG 226 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + FQ++DD+ + + ++N GK G+D GK +LP+I Q Sbjct: 227 VYFQIIDDIKNIKNKIN--GKEFGDDLIEGKKSLPIIYFLQ 265 >gi|24111799|ref|NP_706309.1| geranyltranstransferase [Shigella flexneri 2a str. 301] gi|30061915|ref|NP_836086.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T] gi|24050587|gb|AAN42016.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella flexneri 2a str. 301] gi|30040159|gb|AAP15892.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella flexneri 2a str. 2457T] gi|281599753|gb|ADA72737.1| Geranyltranstransferase [Shigella flexneri 2002017] gi|313646962|gb|EFS11419.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T] gi|332760701|gb|EGJ90989.1| geranyltranstransferase [Shigella flexneri 4343-70] gi|332761685|gb|EGJ91964.1| geranyltranstransferase [Shigella flexneri 2747-71] gi|332764298|gb|EGJ94534.1| geranyltranstransferase [Shigella flexneri K-671] gi|332768526|gb|EGJ98709.1| geranyltranstransferase [Shigella flexneri 2930-71] gi|333007813|gb|EGK27289.1| geranyltranstransferase [Shigella flexneri K-218] gi|333021995|gb|EGK41240.1| geranyltranstransferase [Shigella flexneri K-304] Length = 299 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + +++ L + + AL D Sbjct: 268 DDARQALKQLAEQSLDTSALEALAD 292 >gi|312884946|ref|ZP_07744636.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367423|gb|EFP94985.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122] Length = 294 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 115/239 (48%), Gaps = 16/239 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSAL 90 +KY + S GKR+RP L AT +L ++ A AIE IHT +L+H +DD L Sbjct: 33 AMKYSLLSEGKRVRPFLVYATGQILGSAVEDLDTAAAAIECIHTYSLIHDDLPAMDDDDL 92 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQL 148 RRG + + T++L GD L + AF ++ E K E + +V R + Sbjct: 93 RRGHPTCHMQFDEATAILAGDALQTLAFTILSEGKLSPKAEKNRIKMVQVLANASGARGM 152 Query: 149 SLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA-LKSYG 198 L + LD+ E + +HV +KT L AA+++ +L G + V L Y Sbjct: 153 CLGQALDLNAEGKSVSLNQLEAIHV--NKTGELIKAAVKLGALSCGSLDDVTATHLDRYA 210 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD + + +GK G D + K T P +L + + +N + + Sbjct: 211 EAIGLAFQVQDDILDLVSDTDTLGKPQGSDIKANKSTYPSLLGLKGSQTKAQNLLEDAL 269 >gi|88193100|pdb|2FOR|A Chain A, Crystal Structure Of The Shigella Flexneri Farnesyl Pyrophosphate Synthase Complex With An Isopentenyl Pyrophosphate gi|88193101|pdb|2FOR|B Chain B, Crystal Structure Of The Shigella Flexneri Farnesyl Pyrophosphate Synthase Complex With An Isopentenyl Pyrophosphate Length = 323 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 58 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 117 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 118 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELASASGIAG 177 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 178 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 235 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 236 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 291 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + +++ L + + AL D Sbjct: 292 DDARQALKQLAEQSLDTSALEALAD 316 >gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 369 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR+RP L LA ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 105 IHESMRYSLLAGGKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDN 164 Query: 88 SALRRGKVAARLVWGNQT--------------SVLVGDFLLSQAFCMVIETKSQEALEAL 133 LRRGK +V+G + + +S A + + +A+ A Sbjct: 165 DDLRRGKPTNHIVFGEDVAVLAGDALLALAFEHIAIATLNVSPARIVRAVGELAKAIGAE 224 Query: 134 SLVACTL----AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 LVA + +EG L ++ L K +++HV KTA L A+ + +++ G + Sbjct: 225 GLVAGQVVDICSEG-LSEVGLEK------LEFIHV--HKTAKLLEGAVVLGAIMGGGTDE 275 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + L+ Y ++G+ FQ+VDD+LD E+GK G+D K T P ++ + Sbjct: 276 EVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLMGIDK 330 >gi|26246427|ref|NP_752466.1| geranyltranstransferase [Escherichia coli CFT073] gi|227884571|ref|ZP_04002376.1| geranyltranstransferase [Escherichia coli 83972] gi|300988027|ref|ZP_07178507.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|301049622|ref|ZP_07196573.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|26106825|gb|AAN79010.1|AE016756_193 Geranyltranstransferase [Escherichia coli CFT073] gi|227838657|gb|EEJ49123.1| geranyltranstransferase [Escherichia coli 83972] gi|300298615|gb|EFJ55000.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|300407579|gb|EFJ91117.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|307552326|gb|ADN45101.1| geranyltranstransferase [Escherichia coli ABU 83972] gi|315294200|gb|EFU53551.1| polyprenyl synthetase [Escherichia coli MS 153-1] Length = 299 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 76/263 (28%), Positives = 128/263 (48%), Gaps = 16/263 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSINTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E D L I + KT L AA+ + +L AG + + L Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRNALPVLDKYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I+D Sbjct: 214 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----IDD 269 Query: 260 GKISVENLKKAFIIMRENRALVD 282 + S++ L + + AL D Sbjct: 270 ARQSLKQLTEQSLDTSALEALAD 292 >gi|121601917|ref|YP_988458.1| polyprenyl synthetase [Bartonella bacilliformis KC583] gi|120614094|gb|ABM44695.1| polyprenyl synthetase [Bartonella bacilliformis KC583] Length = 300 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 14/221 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ ++Y + +GGK LRP + +A + + ++ + + A+E IH +L+HDD+ + Sbjct: 36 ELLLQAMRYGVLNGGKCLRPFFVIQSAALFDVPPEHALDVGVALECIHCYSLIHDDLPAM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-------CMVIETKSQEALEALSLVAC 138 D+ LRRGK + T++L G+ LL+ AF C ++ + AL+ A Sbjct: 96 DNDILRRGKPTVHKAFDEATAILAGNALLTFAFEIIAHKACALLPQTRLNLITALAQAAG 155 Query: 139 --TLAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + G++ L K D T+ L + + KTA L S + + +++ S+ Q Sbjct: 156 LGGMIGGQILDLEAEKKPQDRTK--ILTLQRMKTAALISFSCQAGAIMGNASASITQQFA 213 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +G +G+AFQL DD+LD +GK G+D K TL Sbjct: 214 DFGTQIGLAFQLTDDLLDVTSSTEILGKTAGKDKAANKATL 254 >gi|313496894|gb|ADR58260.1| IspA [Pseudomonas putida BIRD-1] Length = 295 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 113/232 (48%), Gaps = 16/232 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 ++E + ++Y + +GGKR+RP+L A L + ACA+E IH +L+HDD+ Sbjct: 27 ELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLP 86 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV------- 136 LRRG+ + ++L GD L S AF +++ ++++ L Sbjct: 87 AMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLSPQIDSIRLAMVQVLAK 146 Query: 137 ---ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR- 191 + G+ L S+ + LD +++H + KT L A++ + +L + + Sbjct: 147 AAGPAGMVGGQAIDLGSVGQKLDQQALEFMH--RHKTGALIEASVRLGALASARAEPAQL 204 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AL++Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 205 DALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|310643237|ref|YP_003947995.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Paenibacillus polymyxa SC2] gi|309248187|gb|ADO57754.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) [Paenibacillus polymyxa SC2] Length = 795 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 117/229 (51%), Gaps = 10/229 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC--AIEFIHTATLLHDDVV 85 E + D Y + GKR+RP+LT + EY D ++ ++E++HTA+L+ DD+ Sbjct: 533 EQLIDAANYSLEGDGKRIRPILTWVMGVN-EYGLDALAIVPLLRSLEYMHTASLIFDDLP 591 Query: 86 --DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 D+++ RRG+ V + T+ L G +L+ +A A L+L+ + + Sbjct: 592 SQDNASTRRGRQTLHQVHNSATAELTGLYLIQKAIGEQASLSQFNAETVLALIQYSARKA 651 Query: 144 ELRQLSLSKNLD-----VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 E + + +LD +T E + KT V F A L + +++A + S AL+ + Sbjct: 652 EDMCMGQAMDLDSKGKALTLEQLNMMCFYKTGVAFEACLVMPAMLAQTEESEIAALQKFA 711 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++GIAFQ+ DD+LD G+ + +GK +G+D N IL ++ +K Sbjct: 712 YHMGIAFQIKDDLLDVEGDTHLLGKPVGQDSDNNNSNFVSILGYEGASK 760 >gi|261252274|ref|ZP_05944847.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] gi|260935665|gb|EEX91654.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] Length = 294 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 14/224 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR RP L T ML + A A+E IH +L+HDD+ +DD Sbjct: 32 EAMRYGLLLGGKRARPFLVYITGQMLGCDKSDLDTPASAVECIHAYSLIHDDLPAMDDDE 91 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----------ALSLVACT 139 LRRG+ + + T++L GD L + AF ++ + E A + A Sbjct: 92 LRRGQTTCHIKFDEATAILTGDALQTLAFTILADGDLHPNAEVNRIKMIKVLADASGANG 151 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYG 198 + G+ L+ ++N V+ E+ + ++KT L +A+ + +L AG + V L Y Sbjct: 152 MCLGQALDLA-AENRSVSLEELEEIHRNKTGALMKSAIRLGALAAGEKGLEVMPQLDKYA 210 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD + +GK G D K T P +L Sbjct: 211 DAVGLAFQVQDDILDIVSDTETLGKPQGSDQELNKSTYPALLGL 254 >gi|304407042|ref|ZP_07388696.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] gi|304344029|gb|EFM09869.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] Length = 304 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 19/252 (7%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE---YRGDNH 64 T D+E IL ++ + + Y + +GGKRLRP L LA A ++ Sbjct: 14 TASDVESALQTILPTSWDVPALLKESMMYSLQAGGKRLRPALVLAAAEAVKCDSRAAAAA 73 Query: 65 VLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + +ACAIE IHT +L+HDD+ +D+ RRGK+ V+G+ ++L GD LL+ AF ++ Sbjct: 74 MPVACAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDAMAILAGDALLTHAFHAIV 133 Query: 123 ETKSQEALEA---------LSLVACTLAEGELRQLSLSKNLDVTEED---YLHVIKSKTA 170 ++ Q + A LS++A + + VT D Y+H+ K+ Sbjct: 134 QSTRQHGVSAEVSLKIVEELSVMAGASGMVGGQAADMLGEQGVTSIDQLRYIHLHKTSDL 193 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 ++FS L ++I G + + +G +G+AFQ+ DD+LD G+ ++GK D Sbjct: 194 IVFS--LRAGAMIGGATEEQLEQITKFGTAIGLAFQIQDDILDLVGDEAKLGKKTNSDVE 251 Query: 231 NGKPTLPVILAF 242 K T P ++ Sbjct: 252 QQKVTYPFLIGL 263 >gi|187929506|ref|YP_001899993.1| Polyprenyl synthetase [Ralstonia pickettii 12J] gi|309781717|ref|ZP_07676450.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA] gi|187726396|gb|ACD27561.1| Polyprenyl synthetase [Ralstonia pickettii 12J] gi|308919358|gb|EFP65022.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA] Length = 303 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 17/225 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GKR+RP+L A + + + ++CA+E IH +L+HDD+ L Sbjct: 36 AMRYATLGAGKRVRPLLAHAAGALGDASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-QEALEALSLVACTLAEG------ 143 RRG+ + T++LVGD L +QAF ++ E + + A A+ + A G Sbjct: 96 RRGRPTVHRAYDEATALLVGDALQTQAFIVLAEQGAVRPATRAVLMGELARASGSQGMAG 155 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 +L+ + ++ + D E + +H + KT L A+L + +L A V + + + +Y Sbjct: 156 GQAIDLQSVGIALSQD--ELEAMH--RMKTGALLRASLRMGALCAEVNAAALEHVDAYAG 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ+VDD+LD + +GK G+D N KPT IL + Sbjct: 212 AVGLAFQVVDDILDVTADTATLGKTAGKDEANDKPTYVSILGLDK 256 >gi|294814941|ref|ZP_06773584.1| Putative polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294327540|gb|EFG09183.1| Putative polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 405 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 5/213 (2%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 S GK +RP L LA A L + V A A+E H +LLHDDV+D RR + A Sbjct: 119 SAGKAIRPALVLAAARALGGDPERAVPAAVAVELAHNFSLLHDDVIDRDPTRRHRPTAWT 178 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVAC--TLAEGELRQLSLSKN--L 154 V+G +++ GD L+S A ++ E A A L AC L G+ + Sbjct: 179 VFGTADAIIAGDALVSLALRILAEDGHPASAAAAGRLSACMIELCAGQQADCAFEGRGPQ 238 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +VT + + + +KT L + + +L A AL ++G G+AFQL+DD++ Sbjct: 239 EVTLAECVEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAFQLIDDLIGI 298 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 G+ GK G D + K +LPV+ A GT Sbjct: 299 WGDPGRTGKPAGADLVSHKKSLPVVAALMSGTP 331 >gi|148545812|ref|YP_001265914.1| polyprenyl synthetase [Pseudomonas putida F1] gi|148509870|gb|ABQ76730.1| farnesyl-diphosphate synthase [Pseudomonas putida F1] Length = 295 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 16/225 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y + +GGKR+RP+L A L + ACA+E IH +L+HDD+ L Sbjct: 34 AMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV----------ACTL 140 RRG+ + ++L GD L S AF +++ ++++ L + Sbjct: 94 RRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLSPQIDSIRLAMVQVLAKAAGPAGM 153 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI-AGVQNSVRQALKSYG 198 G+ L S+ + LD +++H + KT L A++ + +L A + + AL++Y Sbjct: 154 VGGQAIDLGSVGQKLDQQALEFMH--RHKTGALIEASVRLGALASARAEQAQLDALQTYA 211 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 212 QAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|285019214|ref|YP_003376925.1| geranylgeranyl pyrophosphate synthase [Xanthomonas albilineans GPE PC73] gi|283474432|emb|CBA16933.1| putative geranylgeranyl pyrophosphate synthase protein [Xanthomonas albilineans] Length = 293 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 115/253 (45%), Gaps = 18/253 (7%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L I + + +++ GGKR+RP+L A+ + A A+E IH +L Sbjct: 22 LPAIAQAPQRLHAAMRHATLGGGKRMRPLLVYASGALFGTDPARLDAPALAVELIHAYSL 81 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKSQEALE 131 +HDD+ +DD ALRRG+ + + T++L GD L S AF T + L+ Sbjct: 82 VHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQSLAFELLAKADAADATLRVQWLQ 141 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTE-----EDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +L T A G +L ++D T D + KT L A++ + +L G Sbjct: 142 --TLAEATGAAGMCGGQAL--DIDATGIVQPLADLQRMHALKTGALIRASVRLGALGGGA 197 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ L ++ LG+AFQ+ DD+LD ++GK G+D K T P +L G Sbjct: 198 DHAALNHLDAFASALGLAFQIRDDILDVEASSEQLGKTAGKDATQAKSTYPALLGMD-GA 256 Query: 247 KREKNFWKSTIND 259 K + T+ D Sbjct: 257 KAKLAELAHTMRD 269 >gi|300937031|ref|ZP_07151897.1| polyprenyl synthetase [Escherichia coli MS 21-1] gi|300457862|gb|EFK21355.1| polyprenyl synthetase [Escherichia coli MS 21-1] Length = 299 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 22/266 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEEDYLHVI--------KSKTAVLFSAALEVSSLIAGVQNSVRQALK---S 196 + + LD+ E HV + KT L AA+ + +L AG + R+AL Sbjct: 154 MCGGQALDLDAEGK-HVPLEALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDK 210 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ Sbjct: 211 YAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL---- 266 Query: 257 INDGKISVENLKKAFIIMRENRALVD 282 I+D + S++ L + + AL D Sbjct: 267 IDDARQSLKQLTEQSLDTSALEALAD 292 >gi|254472285|ref|ZP_05085685.1| geranyltranstransferase [Pseudovibrio sp. JE062] gi|211958568|gb|EEA93768.1| geranyltranstransferase [Pseudovibrio sp. JE062] Length = 301 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 116/235 (49%), Gaps = 16/235 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L + + E + + + Y SGGKRLRP+L + A + + + ++ A A+E IH + Sbjct: 28 VLPQEVARPERLLEAMNYAALSGGKRLRPVLMVEAARLFGHEDEGTLVAASALECIHCYS 87 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK----------- 125 L HDD+ LRRG+ + T++L GD LL+ AF + + + Sbjct: 88 LAHDDLPAMDDDDLRRGRPTTHKAFDEATAILAGDALLTIAFDFIADEQVHPDAAIRLRL 147 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 SQE A + +A G++ L+ S++ D TE + + KT L A +++A Sbjct: 148 SQELARASGIGG--MAGGQMLDLA-SEHRDRTEAEIRQLQAMKTGALIRYACRAGAILAN 204 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + L +G +G+AFQL DD+LD G+ +GK G+D GK TL +L Sbjct: 205 ASDDDIARLTRFGEIIGLAFQLADDLLDLTGDAEVVGKATGKDAEAGKATLVSLL 259 >gi|238791414|ref|ZP_04635052.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909] gi|238729030|gb|EEQ20546.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909] Length = 306 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 84/276 (30%), Positives = 130/276 (47%), Gaps = 42/276 (15%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GGKRLRP L AT M N A AIE IH +L+HDD+ L Sbjct: 42 AMRYGAVLGGKRLRPYLVYATGQMFGLSLTNLDAPAAAIECIHAYSLIHDDLPAMDDDDL 101 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVACTLA------- 141 RRG+ + +G ++L GD L + AF ++ E + + LS++A LA Sbjct: 102 RRGQPTCHVKFGEANAILAGDALQTLAFSILAEANMPDVANKDRLSMIA-ELAKASGVAG 160 Query: 142 ---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 E E RQ+SL+ NL+ + + KT L AA+ + +L AG R+ Sbjct: 161 MCGGQALDLEAEARQISLT-NLE-------QIHRYKTGALIRAAVRLGALAAGAPG--RR 210 Query: 193 ALK---SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL Y +G+AFQ+ DD+LD G+ +GK G D + GK T P +L + Sbjct: 211 ALPLLDRYSEAIGLAFQVQDDILDVIGDTATIGKRQGSDQQLGKSTYPALLGLDNAKAKA 270 Query: 250 KNFWK------STINDGKISVENLK--KAFIIMREN 277 + ++ + +++ ++ L+ FII R+N Sbjct: 271 LDLYQEALSALNALSEQSYNITPLQALACFIIERDN 306 >gi|261346381|ref|ZP_05974025.1| geranyltranstransferase [Providencia rustigianii DSM 4541] gi|282565699|gb|EFB71234.1| geranyltranstransferase [Providencia rustigianii DSM 4541] Length = 305 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 75/245 (30%), Positives = 118/245 (48%), Gaps = 20/245 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87 + +KY GGKRLRP LT A ML DN A A+E IH +L+H +DD Sbjct: 38 LAQAMKYGTLLGGKRLRPFLTYAVGEMLGVSQDNLDAPAAAVECIHAYSLIHDDLPAMDD 97 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVA----- 137 LRRG+ + +G +VL GD L + AF + E ++ + +S +A Sbjct: 98 DDLRRGQPTCHIKFGEGNAVLAGDALQTFAFQLLSSAAMPEVSDKDRIAMISELAYASGL 157 Query: 138 CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA--- 193 + G+ L + K +D+ + +H + KT L AA+ + + AG + RQ+ Sbjct: 158 AGMCGGQALDLDAEGKRVDLAALERIH--QHKTGALIRAAIRLGAYAAGEKG--RQSIAI 213 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L Y +G+AFQ+ DD+LD G+ GK G D ++ K T P +L + ++ K + Sbjct: 214 LDQYANAIGLAFQVQDDILDVIGDSEITGKRQGADEQHEKSTYPSLLGLEAAQEKAKELY 273 Query: 254 KSTIN 258 + I Sbjct: 274 QDAIT 278 >gi|307704839|ref|ZP_07641733.1| farnesyl diphosphate synthase [Streptococcus mitis SK597] gi|307621615|gb|EFO00658.1| farnesyl diphosphate synthase [Streptococcus mitis SK597] Length = 291 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 20/280 (7%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L ++ +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVELALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLGVLEALQVA 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT-EEDYLH------VIKSKT 169 + ++ + ++ + +LA G L ++ + LD+ E YL + +KT Sbjct: 117 PYALIAQADLPSQIKVDLIANLSLASGSLGMVA-GQVLDMEGEHQYLSLEELQTIHANKT 175 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+GK +D Sbjct: 176 GKLLAYPFQAAAIIAELAPEIQAKLKTVGALIGLAFQVRDDVLDVTASFEEIGKTPQKDL 235 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 + K T P +L + F T++ +E + + Sbjct: 236 QAEKSTYPALLGLEEAIA----FCNQTLDQANAKLEEIAQ 271 >gi|320173761|gb|EFW48944.1| geranyltranstransferase [Shigella dysenteriae CDC 74-1112] Length = 299 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 22/266 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEEDYLHVI--------KSKTAVLFSAALEVSSLIAGVQNSVRQALK---S 196 + + LD+ E HV + KT L AA+ + +L AG + R+AL Sbjct: 154 MCGGQALDLDAEGK-HVPLNALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDK 210 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ Sbjct: 211 YAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL---- 266 Query: 257 INDGKISVENLKKAFIIMRENRALVD 282 I+D + S++ L + + AL D Sbjct: 267 IDDARQSLKQLAEQSLDTSALEALAD 292 >gi|188527752|ref|YP_001910439.1| geranyltranstransferase [Helicobacter pylori Shi470] gi|188143992|gb|ACD48409.1| geranyltranstransferase [Helicobacter pylori Shi470] gi|308063758|gb|ADO05645.1| geranyltranstransferase [Helicobacter pylori Sat464] Length = 303 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 142/273 (52%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSSQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGFVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D K + +L ++ + + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--GAKNSFVNLLGLEKASGYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 ++D + LK A+ +++EN AL++T ++ Sbjct: 273 VLDDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|146329907|ref|YP_001209557.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A] gi|146233377|gb|ABQ14355.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A] Length = 280 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 117/232 (50%), Gaps = 15/232 (6%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA----LMLEYRGDNHVLLA 68 ++V + + + D ++ ++Y + GKRLR L A A L L DN A Sbjct: 8 DRVEHALERALPHDESLLTKAMRYSTLNAGKRLRAALIYAVAEDFSLPLSLV-DN---AA 63 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ET 124 CA+E IH +L+HDD+ +D+ LRRGK + + T++L GD L + AF ++ E Sbjct: 64 CALECIHAYSLIHDDLPAMDNDDLRRGKASCHKAFDEATAILAGDALNTLAFALLARDEK 123 Query: 125 KSQEALEALSLVACTLAEGE-LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + LS A + G+ L + +DV + +H + KT L +AAL + +L Sbjct: 124 NGLAQIRCLSAAAGAMVCGQSLDMIYTGTAIDVQKLQIIH--QKKTGALLTAALHLGALP 181 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + L + G ++GIA+Q++DD+LD + +GK G+D + K T Sbjct: 182 SPDYAHYQTQLTAIGEHIGIAYQIIDDMLDATSDSQTLGKTAGKDAQQLKNT 233 >gi|126465401|ref|YP_001040510.1| polyprenyl synthetase [Staphylothermus marinus F1] gi|126014224|gb|ABN69602.1| Polyprenyl synthetase [Staphylothermus marinus F1] Length = 365 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 88/318 (27%), Positives = 144/318 (45%), Gaps = 45/318 (14%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY---RGDNHVLLACAIEFIHTA 77 K + S V IP + + GGKRLR L L ++ D+ L IEF+ + Sbjct: 31 KGVSSKVVDIPFISRDYTLRGGKRLRAFLVLIGYWSRKWGYGNIDSIKYLMAGIEFLQSY 90 Query: 78 TLLHDDVVDDSALRRGKVAARLVW-----------------GNQTSVLVGDFLLSQAFCM 120 L+HDD++D+ +RRG VW G +++VGD+L S A M Sbjct: 91 LLVHDDIMDEDEIRRGGPTVH-VWFDRKCREEGLISRCKHYGVSQAIIVGDYLESLAVSM 149 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV----------TEEDYLHVIKSKTA 170 T+ AL + T G +R ++ + LDV +E+D ++ KTA Sbjct: 150 F--TRLNLPDYALKELIKTYTRG-VRLVAYGQFLDVLIANTPLKKVSEDDVYNIHMLKTA 206 Query: 171 VLFSAALEVSSLIAGV-----QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 S +E+ + + N + L Y + GIAFQL DD+L G+ GK + Sbjct: 207 ---SYTVELPLHLGAIASLMYNNELLMELSQYALPAGIAFQLQDDILGLYGDPKVTGKPV 263 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK---ISVENLKKAFIIMRENRALVD 282 G D R K TL ++ A+Q +K F + + K I+ E++++ I+RE +L Sbjct: 264 GSDVREKKKTLLIVKAYQFADADDKKFLEELYDKRKPEEITDEDIRRVQSIVRETGSLDY 323 Query: 283 TEYRAYSYGQKAKDSLRC 300 + + Y ++A+++LR Sbjct: 324 SVKKMNEYVERARNALRS 341 >gi|117622682|ref|YP_851595.1| geranyltranstransferase [Escherichia coli APEC O1] gi|115511806|gb|ABI99880.1| geranyltranstransferase [Escherichia coli APEC O1] Length = 299 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 77/265 (29%), Positives = 129/265 (48%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L A + + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKRVPLDALERIHRHKTGALIRATVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|326443312|ref|ZP_08218046.1| putative polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 343 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 5/213 (2%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 S GK +RP L LA A L + V A A+E H +LLHDDV+D RR + A Sbjct: 57 SAGKAIRPALVLAAARALGGDPERAVPAAVAVELAHNFSLLHDDVIDRDPTRRHRPTAWT 116 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVAC--TLAEGELRQLSLSKN--L 154 V+G +++ GD L+S A ++ E A A L AC L G+ + Sbjct: 117 VFGTADAIIAGDALVSLALRILAEDGHPASAAAAGRLSACMIELCAGQQADCAFEGRGPQ 176 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +VT + + + +KT L + + +L A AL ++G G+AFQL+DD++ Sbjct: 177 EVTLAECVEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAFQLIDDLIGI 236 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 G+ GK G D + K +LPV+ A GT Sbjct: 237 WGDPGRTGKPAGADLVSHKKSLPVVAALMSGTP 269 >gi|227503267|ref|ZP_03933316.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens ATCC 49725] gi|227075770|gb|EEI13733.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens ATCC 49725] Length = 359 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 79/255 (30%), Positives = 117/255 (45%), Gaps = 27/255 (10%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH----VLLACAIEFIHTAT 78 I + V ++ + GGKR+RPM A + RG + A ++EFI Sbjct: 32 IGAPVSTAMSFLESFVLDGGKRVRPMYAWA-GYLAAGRGSESPEAMLRAASSLEFIQACA 90 Query: 79 LLHDDVVDDSALRRGKV-----AARL-----------VWGNQTSVLVGDFLLSQAFCMVI 122 L+HDD++D S RRGK A RL +G ++LVGDF L A M Sbjct: 91 LIHDDIIDASNTRRGKPTVHREAERLHRESDFLGDPEFFGTSVAILVGDFALVYAEDMFQ 150 Query: 123 ETK-SQEALE----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAA 176 ++ S EAL+ + + G+L +SL + V + KTA Sbjct: 151 DSGLSPEALQRARDPWRGMRTEVLGGQLLDISLEAAGSESVALSNSVNRYKTAAYTIERP 210 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 L + + IAG + + A + YG ++GIA+QL DD L G+ GK G+D R GK T Sbjct: 211 LHLGAAIAGASDQLISAFRGYGHDIGIAYQLRDDQLGVFGDPEITGKPAGDDLREGKRTE 270 Query: 237 PVILAFQRGTKREKN 251 + LA QR +R+ + Sbjct: 271 LLALALQRADERDPS 285 >gi|261337603|ref|ZP_05965487.1| probably short chain isoprenyl diphosphate synthase [Bifidobacterium gallicum DSM 20093] gi|270278026|gb|EFA23880.1| probably short chain isoprenyl diphosphate synthase [Bifidobacterium gallicum DSM 20093] Length = 385 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 83/256 (32%), Positives = 127/256 (49%), Gaps = 45/256 (17%) Query: 23 ICSDVE-MIPDVVKYLIFS--GGKRLRPMLTLATALMLE---------------YRGDNH 64 I S +E M+ V + + S GGKRLR +L L T ++E R Sbjct: 45 IASSLEPMLNAVARQAVISSEGGKRLRALLLLETYRVMEPTQPTPASDQTPTNQARIKQS 104 Query: 65 VL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT---------SVLVGDFLL 114 VL LACAIE TA L+HDD++DD+ LRRGK AA N +++GD L Sbjct: 105 VLDLACAIELFQTAALVHDDIIDDADLRRGKPAAHRALANAGGTLSTGIGLGIMLGDLLA 164 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAE-------GELRQLSLSK-NLDVTE---EDYLH 163 + C V+ +++ AL + + G++ L++ + +LD + + L+ Sbjct: 165 TA--CSVVASEASHALPDPNAIERAFMRMQQEVEIGQVLDLAIERMSLDDAQALADASLN 222 Query: 164 VIKSKTAVLFS-AALEVSSLIAGVQ--NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 V + KTA + L ++ L AG+ ++R A+ G+ LGIAFQ+ DD++D G + Sbjct: 223 VFRWKTASYTTITPLLLAMLAAGMPEDEALRHAID-IGLPLGIAFQIADDLIDVTGSTSN 281 Query: 221 MGKNIGEDFRNGKPTL 236 GK IG D R GK T+ Sbjct: 282 TGKPIGGDIREGKRTV 297 >gi|110590588|pdb|2H8O|A Chain A, The 1.6a Crystal Structure Of The Geranyltransferase From Agrobacterium Tumefaciens Length = 335 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 110/215 (51%), Gaps = 10/215 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + +++ + +GGKRLRP L + + +L + + + A+E +H +L+HDD+ Sbjct: 75 EAMRHGVLNGGKRLRPFLVIESVALLGGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDD 134 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-- 147 LRRG+ + T++L GD LL+ AF ++ + A E + + +LA Sbjct: 135 LRRGQPTVHRKFDEATAILAGDSLLTLAFDIIASDDNPLAAERKAALVISLARAAGIGGM 194 Query: 148 -----LSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 L L+ +ED + +++ KT L A E ++IAG + RQ L+ +G + Sbjct: 195 AGGQALDLAAEKKAPDEDGIITLQAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKI 254 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G++FQL DD+LD + MGK G+D GK TL Sbjct: 255 GLSFQLADDLLDLTADAATMGKATGKDAARGKGTL 289 >gi|51598574|ref|YP_072762.1| octaprenyl-diphosphate synthase [Borrelia garinii PBi] gi|51573145|gb|AAU07170.1| octaprenyl-diphosphate synthase [Borrelia garinii PBi] Length = 347 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 79/307 (25%), Positives = 153/307 (49%), Gaps = 32/307 (10%) Query: 32 DVVKY----LIFSGGKRLRPMLT--LATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV 84 D +K+ +I GG R+RPML LA AL L+ + D + L+ +E H+ +L+ DD+ Sbjct: 44 DYIKFPAIEIINRGGDRIRPMLMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDI 103 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAE 142 D+S RRG+ A L++G S+ G+ + L K + L TL+ Sbjct: 104 EDNSLKRRGRSAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENYFTTLS- 162 Query: 143 GELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 L L + +D+ + ++Y+ +++ KTA LF A ++++I ++ ++ Sbjct: 163 ----NLHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKL 218 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 ++ + LG+ FQ++DD+ + + ++N GK G+D GK +LP+I Q K Sbjct: 219 YSTF-LKLGVYFQIIDDIKNIKNKIN--GKEFGDDLIEGKKSLPIIYFLQEKKFEPKIIA 275 Query: 254 K-STINDGKISVENLKKAFII---MRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKK 308 K + I + + + E K+ F + + ++++ ++ A Y + K L P + +K Sbjct: 276 KFNQIKNAQTTTER-KEIFKLTEMINSSKSIRNSTTIALKYLNEFKTELNLYPLKNRYKN 334 Query: 309 SLMEVVD 315 L+++V+ Sbjct: 335 ILIDIVE 341 >gi|116492587|ref|YP_804322.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745] gi|116102737|gb|ABJ67880.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745] Length = 296 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 72/240 (30%), Positives = 127/240 (52%), Gaps = 17/240 (7%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLH 81 + +D++M+ +KY I +GGKR+RP++ LA + +L +A A+E +HT +L+H Sbjct: 30 LNTDLKMM---MKYSIDAGGKRVRPLVLLAILKAFGKTPNYDILTVAAALEAVHTYSLIH 86 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLV 136 DD+ +D+ LRRG+ + +G ++L GD LL+ AF + T ++ +++ LSL Sbjct: 87 DDLPAMDNDDLRRGRPTSHKKFGEAEAILAGDALLTVAFQWISSTNLKDRIKSELVLSLA 146 Query: 137 ACTLAEGELRQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + A G + L ++ + E +LH +K+ +LF A E + ++ + V Sbjct: 147 SDAGASGMIAGQLLDIQGNQRHYSLAELKHLHHLKTGKMLLFPA--EAALIMKPSKLQVA 204 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + +K + N G+AFQ+ DD++D +GK G+D K T +L G K E N Sbjct: 205 ELVKDFMANFGLAFQIHDDIIDVTESTAILGKTAGKDVDLNKNTYVNLLGLS-GAKEELN 263 >gi|254389005|ref|ZP_05004236.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|197702723|gb|EDY48535.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 389 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 5/213 (2%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 S GK +RP L LA A L + V A A+E H +LLHDDV+D RR + A Sbjct: 103 SAGKAIRPALVLAAARALGGDPERAVPAAVAVELAHNFSLLHDDVIDRDPTRRHRPTAWT 162 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVAC--TLAEGELRQLSLSKN--L 154 V+G +++ GD L+S A ++ E A A L AC L G+ + Sbjct: 163 VFGTADAIIAGDALVSLALRILAEDGHPASAAAAGRLSACMIELCAGQQADCAFEGRGPQ 222 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +VT + + + +KT L + + +L A AL ++G G+AFQL+DD++ Sbjct: 223 EVTLAECVEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAFQLIDDLIGI 282 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 G+ GK G D + K +LPV+ A GT Sbjct: 283 WGDPGRTGKPAGADLVSHKKSLPVVAALMSGTP 315 >gi|54295170|ref|YP_127585.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens] gi|53755002|emb|CAH16490.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens] Length = 298 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 15/240 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L I I + Y +FSGGKR+RP+L +++ + ++A A+E H + Sbjct: 20 LLNEIVIPAPQIRSALHYALFSGGKRIRPILVYLAGDLIDVDQEVLDIIAAALELTHCYS 79 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +D+ LRRGK + + T++LVGD + + A +V+ + L A +V Sbjct: 80 LIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVVL-MRLSPLLPAAQVV 138 Query: 137 ACT-----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-VSSLIA 184 A T + G+ LS VTEE + KT L A E V + Sbjct: 139 AITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLILACFEMVLAAQH 198 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V ++ AL++YG ++G+ FQ+ DD LD +GK D N K T + Q+ Sbjct: 199 EVSEQIKSALRTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSSDQANQKTTFATLFNKQQ 258 >gi|307720223|ref|YP_003891363.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM 16294] gi|306978316|gb|ADN08351.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM 16294] Length = 283 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 23/241 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLA-----TALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 ++ ++ +GGKR RP L L LMLE H A A+EF+HT +L+HDD+ + Sbjct: 25 ALQNMLEAGGKRFRPALLLGVVKAYNPLMLE--SARHA--ALAVEFLHTYSLIHDDLPAM 80 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 DDS LRRGK + + T++LVGD L + +F ++ + + L+ + G L Sbjct: 81 DDSPLRRGKPTLHVSFDEVTAILVGDALNTYSFEVLANAPFSDETR-VKLIRELASNGGL 139 Query: 146 RQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + L + +D + ED + +KTA L +A+L++ +LI G ++ + L +G Sbjct: 140 NGMVLGQAIDCYFENKPLAVEDIKTLHTNKTAKLIAASLKMGALIVGRDDAADK-LYDFG 198 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + LG+ FQ+ DD+LD E GK D K + IL + T E N +N Sbjct: 199 IKLGLLFQIQDDILDVTQSSQEAGKLTNND--EDKNSFVTILGLEEATN-EANILADELN 255 Query: 259 D 259 + Sbjct: 256 N 256 >gi|167031589|ref|YP_001666820.1| polyprenyl synthetase [Pseudomonas putida GB-1] gi|166858077|gb|ABY96484.1| Polyprenyl synthetase [Pseudomonas putida GB-1] Length = 295 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 16/232 (6%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 ++E + ++Y + +GGKR+RP+L A L + ACA+E IH +L+HDD+ Sbjct: 27 ELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLP 86 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEA-------LEALSL 135 LRRG+ + ++L GD L S AF +++ S +A ++AL+ Sbjct: 87 AMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPHLSPQADNIRLAMVQALAK 146 Query: 136 VA--CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI-AGVQNSVR 191 A + G+ L S+ LD +++H + KT L A++ + +L A + + Sbjct: 147 AAGPAGMVGGQAIDLGSVGLKLDQQALEFMH--RHKTGALIEASVRLGALASARAEQAQL 204 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AL++Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 205 DALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256 >gi|170290692|ref|YP_001737508.1| polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174772|gb|ACB07825.1| Polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 352 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 81/295 (27%), Positives = 139/295 (47%), Gaps = 13/295 (4%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 L+ GGKR RP L L + L + + LA IE +H +L+ DD+ D + +RRG A Sbjct: 58 LLSRGGKRWRPWLFLVLSRNLGVDLERYKELALIIELLHNGSLIADDIEDGAEVRRGDKA 117 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE------GELRQLSL 150 + +G +V + + +++E E L+ LV L + G+ + Sbjct: 118 IHIKYGLDIAVNLSSAMYFLPLRILMEMNVDE-LKYRRLVNAYLEDMIRIHIGQATDIGW 176 Query: 151 SKNLDVTE----EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + L E E YL + +KT VL A +++ A + + + + ++G+AFQ Sbjct: 177 HRGLRDPETVGVEHYLEMCANKTGVLPRMAARFAAIAADLSEEEERRIGKFAESIGVAFQ 236 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 + DD+L+ R N +GK GED R GK TL VI+ R + E+ K ++ E Sbjct: 237 IQDDILNLRSAEN-LGKEFGEDIREGKITLMVIVTLSRAGEEERRRLKEILSMHTSDREL 295 Query: 267 LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-CLPDSSWKKSLMEVVDFCLQR 320 +K+A IM A+ A + + +R LP++ +K + E+ +F ++R Sbjct: 296 IKEAISIMERQGAIDYARDVARKIVMDSWEDIRDLLPENIYKDKIRELANFLIER 350 >gi|238783627|ref|ZP_04627648.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970] gi|238715505|gb|EEQ07496.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970] Length = 306 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 83/275 (30%), Positives = 131/275 (47%), Gaps = 38/275 (13%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L AT M A AIE IH +L+HDD+ +D+ Sbjct: 41 EAMRYGAVLGGKRLRPYLVYATGQMFGLSLTALDAPAAAIECIHAYSLIHDDLPAMDNDD 100 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLA------ 141 LRRG+ + +G ++L GD L + AF ++ E + + + L++VA LA Sbjct: 101 LRRGQPTCHIKFGEANAILAGDALQTLAFTILAEAEMPDVADKDRLAMVA-ELAHASGVA 159 Query: 142 ----------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 E E RQ+SL+ E + +H + KT L AA+ + +L AG + Sbjct: 160 GMCGGQALDLEAEARQISLA------ELEQIH--RHKTGALIRAAVRLGALAAGARGRAA 211 Query: 192 QAL-KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L Y +G+AFQ+ DD+LD G+ +GK G D + GK T P +L + Sbjct: 212 LPLLDRYAEAIGLAFQVQDDILDVIGDTATIGKRQGSDQQLGKSTYPALLGLDCAKAKAM 271 Query: 251 NFWKSTIND-GKISVENLKKA-------FIIMREN 277 + ++ ++ +S ++ A FII R+N Sbjct: 272 DLYQEALSALNALSAQSYNIAPLQALACFIIERDN 306 >gi|323976098|gb|EGB71191.1| polyprenyl synthetase [Escherichia coli TW10509] Length = 299 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 22/266 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIGG 153 Query: 148 LSLSKNLDVTEEDYLHVI--------KSKTAVLFSAALEVSSLIAGVQNSVRQALK---S 196 + + LD+ E HV + KT L AA+ + +L AG + R+AL Sbjct: 154 MCGGQALDLDAEGK-HVPLNALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPILDK 210 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ Sbjct: 211 YAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKAQDL---- 266 Query: 257 INDGKISVENLKKAFIIMRENRALVD 282 I+D + S++ L + + AL D Sbjct: 267 IDDARQSLKQLAEQSLDTSALEALAD 292 >gi|148654322|ref|YP_001274527.1| polyprenyl synthetase [Roseiflexus sp. RS-1] gi|148566432|gb|ABQ88577.1| Polyprenyl synthetase [Roseiflexus sp. RS-1] Length = 330 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 78/274 (28%), Positives = 126/274 (45%), Gaps = 12/274 (4%) Query: 44 RLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN 103 RLR L + A + Y V A A E IH+AT +HD +++++A RRGK W Sbjct: 62 RLRAALVMLAARLGRYDTRRVVHAAAAAELIHSATTVHDSLINEAARRRGKPVGDQHWNG 121 Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163 +++ GD+LL+ A + + S V EG+L +++ LD + Sbjct: 122 DVALMSGDYLLALAAAEMALAPDARIIGMYSRVVMAFCEGKLAPVTVINPLDQALAQHEF 181 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM-G 222 V +S+TA L AA V + +++ L +G LG+A + + DY EM G Sbjct: 182 VAESRTAALLEAAARVGVVCGSGDDALGDLLGPFGRALGMALHIAIEARDY-----EMGG 236 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR-ALV 281 + G D R G+ TLP+I A E +T+ D + ++ A +I R R + Sbjct: 237 SDAGRDLRAGRITLPLIYA----AHAEGGAGLATVID-QHPLDARHAAEVIARVRRDGVP 291 Query: 282 DTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 RA Y Q+A ++L LP + + +L + D Sbjct: 292 PARARAQQYVQQAIETLTALPPGATRDALAALAD 325 >gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 360 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 20/236 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV- 84 D I + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT++L+HDD+ Sbjct: 89 DPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLP 148 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAE 142 +DD+ LRRGK V+G +VL GD LL+ AF M + + A E + LA+ Sbjct: 149 CMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLVAPERMIRSVTELAK 208 Query: 143 ---------GELRQLSLSKNL---DVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 G++ L S+ L DV E +++H+ KTA L AA + ++I G Sbjct: 209 AIGTKGLVAGQVSDLC-SQGLNPYDVGLERLEFIHL--HKTAALLEAAAVLGAIIGGGTE 265 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Q L+ YG +G+ FQ+VDD++D E+GK G+D + K T P ++ +R Sbjct: 266 EEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVKARKLTYPRLIGLER 321 >gi|254236932|ref|ZP_04930255.1| geranyltranstransferase [Pseudomonas aeruginosa C3719] gi|126168863|gb|EAZ54374.1| geranyltranstransferase [Pseudomonas aeruginosa C3719] Length = 295 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 21/271 (7%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 +++ + + ++Y + +GGKR+RP+L A L ACA+E IH +L+HDD+ Sbjct: 27 ELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLP 86 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQE---ALEALSLVA- 137 LRRG+ + T++L D L + AF ++ +T+ QE LE L+ +A Sbjct: 87 AMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLAR 146 Query: 138 ----CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR- 191 + G+ L S+ LD + +H + KT L A++ + +L +G S Sbjct: 147 AAGSAGMVGGQAIDLGSVGVALDQAALEVMH--RHKTGALIEASVRLGALASGRAESASL 204 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--RGTKRE 249 AL+ Y +G+AFQ+ DD+LD + +GK G+D + KPT P +L + +G E Sbjct: 205 AALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALE 264 Query: 250 -KNFWKSTINDGKISVENLKK--AFIIMREN 277 ++ + ++ S + L++ +I+ R N Sbjct: 265 LRDLALAALDGFPPSADPLRQLARYIVERRN 295 >gi|331212927|ref|XP_003307733.1| prenyl transferase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309298136|gb|EFP74727.1| prenyl transferase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 452 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 39/217 (17%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IH ++LLHDDV+D + RRG+ +A +G++ SVL GDFLL++A + ++ Sbjct: 162 LAEIAELIHVSSLLHDDVIDQAETRRGQASAPRQFGSKLSVLAGDFLLARASLNLARLRN 221 Query: 127 QEALEALSLVACTLAEGELRQLS------------LSKNLDVTEEDYLHVIKSKTAV--- 171 E +E +S V L EGEL QL L+ + D + + S A Sbjct: 222 FEVIELISSVISNLVEGELIQLESILVPHLQNPPKLAPSSDPSNLQSTSLAHSPAAFDPR 281 Query: 172 LF-----SAALEVSSLIAGV------------------QNSVRQALKSYGMNLGIAFQLV 208 LF L+ +SLIA + +A +G +LG+AFQ+V Sbjct: 282 LFDFYMRKNYLKTASLIAKTCRAAVILSSSSSSPPSPQTQELIEASYQFGKHLGLAFQIV 341 Query: 209 DDVLDYRGEVNEMGKN-IGEDFRNGKPTLPVILAFQR 244 DD+LDY G +E+GK G D + G T P + A+++ Sbjct: 342 DDILDYTGSEDELGKTGNGSDLKAGLITGPGLFAWKQ 378 >gi|293408568|ref|ZP_06652407.1| geranyltranstransferase [Escherichia coli B354] gi|291471746|gb|EFF14229.1| geranyltranstransferase [Escherichia coli B354] Length = 299 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + + + +S+++ + + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPKVSDRDRISMISELASASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E D L I + KT L AA+ + +L AG + R+AL Y Sbjct: 154 MCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG--DKGRRALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL----I 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 +D + S++ L + + AL D Sbjct: 268 DDARQSLKQLAEQSLDTSALEALAD 292 >gi|256821709|ref|YP_003145672.1| polyprenyl synthetase [Kangiella koreensis DSM 16069] gi|256795248|gb|ACV25904.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069] Length = 296 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 79/251 (31%), Positives = 126/251 (50%), Gaps = 21/251 (8%) Query: 17 FLILK-RICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 F IL R+ SD + + ++Y +GGKR+RP L T L + A A+E Sbjct: 15 FKILNTRLPSDDTNPQSLHQAMRYGALNGGKRIRPTLVYMTGQALGAELIDLDSPALAVE 74 Query: 73 FIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKS 126 IH +L+HDD+ LRRGK + +G T++L GD L +QAF K+ Sbjct: 75 LIHCYSLVHDDLPAMDDDDLRRGKPTCHIQFGEATAILAGDALHTQAFEELASHPFSAKA 134 Query: 127 Q----EALEALSLVACTLAEGELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 Q + ++ L+ + +L G + + L SK +D+ + +H + KT L A++ + Sbjct: 135 QPQQLQMIQLLAQASGSLGMGGGQAIDLESTSKIIDLATLEQMH--RMKTGALIKASVLL 192 Query: 180 SSLIAGVQNSVRQ-ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 +L AG N + Q AL+ Y +G+AFQ+ DD+LD + +GK G D K T P Sbjct: 193 GALCAGKLNQLEQDALERYADAIGLAFQVKDDILDIESDTTTLGKPQGSDLAKDKNTYPA 252 Query: 239 ILAFQRGTKRE 249 +L G+K++ Sbjct: 253 LLGLD-GSKQK 262 >gi|207091726|ref|ZP_03239513.1| geranyltranstransferase [Helicobacter pylori HPKX_438_AG0C1] gi|207108226|ref|ZP_03242388.1| geranyltranstransferase [Helicobacter pylori HPKX_438_CA4C1] Length = 303 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 142/273 (52%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 +LRR + T+VL+GD L + +F E S LE+ + LV A G + Sbjct: 101 SLRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESHIIVELVKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ G+ FQ++DD++D + E GK D + K + +L ++ + + Sbjct: 215 AFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLKKASDYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK A+ +++EN AL++T ++ Sbjct: 273 VLNDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|300722008|ref|YP_003711288.1| geranyltranstransferase [Xenorhabdus nematophila ATCC 19061] gi|297628505|emb|CBJ89072.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Xenorhabdus nematophila ATCC 19061] Length = 315 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 12/230 (5%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKRLRP L + M + A A+E IH +L+HDD+ +D+ LRRG+ Sbjct: 59 GGKRLRPFLVYSVGEMFGLSRKSLDAAALALECIHAYSLIHDDLPAMDNDDLRRGQPTCH 118 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVACTLAEGELRQLSLSKNLDV 156 + +G ++L GD L S AF ++ + + L++VA + + ++LD+ Sbjct: 119 IKFGESQAILAGDALQSLAFELLAHYDMPDVALSDRLAMVAELASASGFAGMCGGQSLDL 178 Query: 157 TEE-------DYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLV 208 E + + KT L AA + + AG + V L Y +G+AFQ+ Sbjct: 179 EAEGKQIDLASLEQIHRHKTGALIRAAARLGAYSAGQRGREVIPLLDQYTQAIGLAFQVH 238 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 DD+LD G +GK G D + GK T P +L ++ ++ + ++ I Sbjct: 239 DDILDVIGNTEIIGKRQGNDQQIGKNTYPALLGLEQAQEKARELYEEAIT 288 >gi|224373694|ref|YP_002608066.1| geranyltranstransferase [Nautilia profundicola AmH] gi|223588370|gb|ACM92106.1| geranyltranstransferase [Nautilia profundicola AmH] Length = 281 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 112/203 (55%), Gaps = 13/203 (6%) Query: 37 LIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 ++ +GGKR RP L L+ E +N A AIE IHT +L+HDD+ +D++ LRRG Sbjct: 26 MLLAGGKRFRPKLLLSVVKAYEPLLVENAKYAAYAIELIHTYSLIHDDLPTMDNADLRRG 85 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACTLAEGELRQLSL- 150 + + T++L GD L + AF ++ ++ S +E + +++ G + Sbjct: 86 HPTLHVTYDEITALLAGDALNTYAFEVLSKSPFSSDVKIELIKILSENAGAGGMVLGQAI 145 Query: 151 -----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 +K L++ E +LH+ +KTA L +A+L++ ++I + +++ L ++G++LGI F Sbjct: 146 DCYFENKKLNLDELKFLHL--NKTAKLIAASLQMGAVIVNLDKKLQEKLYNFGIDLGILF 203 Query: 206 QLVDDVLDYRGEVNEMGKNIGED 228 Q+ DD+LD E GK G D Sbjct: 204 QVQDDILDVTMSSEEAGKTTGVD 226 >gi|29654557|ref|NP_820249.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493] gi|29541825|gb|AAO90763.1| dimethylallyltransferase [Coxiella burnetii RSA 493] Length = 267 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 103/209 (49%), Gaps = 9/209 (4%) Query: 13 EKVNFLILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 E++N L I D+ P + + Y + SGGKR+RP+ T AT E A Sbjct: 9 ERINHK-LGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAA 67 Query: 69 CAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 CAIE +H +L+H +DD RRGK + + T++L GD L AF ++ K+ Sbjct: 68 CAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDKN 127 Query: 127 QEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + L+ +L +QL L KN + T E V + KT LFS A+E+ +L AG Sbjct: 128 IRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAG 187 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLD 213 + R Q L+ G +G+ FQ DD+ D Sbjct: 188 CLDEKRLQKLRKLGATVGLIFQWQDDLAD 216 >gi|317182228|dbj|BAJ60012.1| geranyltranstransferase [Helicobacter pylori F57] Length = 303 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 142/273 (52%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALGIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D + K + +L ++ + + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLEKASGYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 ++D + LK A+ +++EN AL++T ++ Sbjct: 273 VLDDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|308062245|gb|ADO04133.1| geranyltranstransferase [Helicobacter pylori Cuz20] Length = 303 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 142/273 (52%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALML----EY--RGDNHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L +Y R + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNRQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 +G+ +G+ FQ++DD++D + E GK D K + +L ++ + + Sbjct: 215 DFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--GAKNSFVNLLGLEKASGYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 ++D + LK A+ +++EN AL++T ++ Sbjct: 273 VLDDLNL----LKSAYPLLQENLNALLNTLFKG 301 >gi|58584994|ref|YP_198567.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419310|gb|AAW71325.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 305 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 116/232 (50%), Gaps = 45/232 (19%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 V+Y++ + K +RP L +A++ + + + +A A+E IHT +L+HDD+ +D+S R Sbjct: 30 VRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCMDNSDTR 89 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF-------------CMVIETKSQEALEALSLVA- 137 RG+++ + T+VL GD LL+ AF C +I+ SQ A+ A +V Sbjct: 90 RGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNEGSNKRCEIIKALSQ-AIGAKGMVGG 148 Query: 138 ---------------------CTLAEGELRQL-----SLSKNLDVTEEDYLHVIK-SKTA 170 ++ RQL +L +T + + I KTA Sbjct: 149 QILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHLMKTA 208 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR-GEVNEM 221 LF+A+ E+ ++I + R+AL +YG+NLG+ FQ DD+ DY+ EVN + Sbjct: 209 KLFAASCEIGAIIGSATDKQRRALYNYGVNLGLIFQAKDDIRDYKQDEVNNL 260 >gi|259046628|ref|ZP_05737029.1| geranyltranstransferase [Granulicatella adiacens ATCC 49175] gi|259036793|gb|EEW38048.1| geranyltranstransferase [Granulicatella adiacens ATCC 49175] Length = 301 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 25/256 (9%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRG 93 Y + SGGKR+RP+LTLA + LACA+E IHT +L+HDD+ +RRG Sbjct: 45 YAVQSGGKRIRPLLTLAVGSAGTSTNKAALDLACALEMIHTYSLIHDDLPGMDDDDMRRG 104 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----------LAE 142 + + T++L GD LL+ AF E + LEA LV + Sbjct: 105 RPTVHKAFDEATAILAGDALLTLAF----EVAANANLEARQLVEAVKILSSASGMSGMIS 160 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+++ ++ S+ + +T E + + KT L AA+ + +L +++A SY + G Sbjct: 161 GQMKDIA-SEEVTITLERMKEIHREKTGELLLAAVRLGNLFVD-DAKMKEAFVSYATHFG 218 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR----EKNFWKSTIN 258 +AFQ+ +D+ D + GK G+D K T P +L + G K E F K+ ++ Sbjct: 219 LAFQIQNDLQDVCWTSEQTGKETGKDSELSKNTYPSLLGVE-GAKEALSTEIAFCKNALD 277 Query: 259 DGKISVENLK-KAFII 273 ++EN + KA +I Sbjct: 278 GVDFTLENEQTKALLI 293 >gi|217033990|ref|ZP_03439413.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10] gi|216943623|gb|EEC23071.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10] Length = 303 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 142/273 (52%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALMGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEGLFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D + K + +L + + + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLEEASGYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 ++D + LK A+ +++EN AL++T ++ Sbjct: 273 VLDDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|85000425|ref|XP_954931.1| prenyl transferase [Theileria annulata strain Ankara] gi|65303077|emb|CAI75455.1| prenyl transferase, putative [Theileria annulata] Length = 468 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 20/198 (10%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 L + E +H +L+HDD++D+S +RR +++ +G + SVL GDFLLS++ ++ ++ Sbjct: 157 LNISYELVHIGSLIHDDIIDESDVRRNLMSSHKKFGVKFSVLFGDFLLSKSAQIITSLQN 216 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS------------ 174 + ++ LS L GEL ++L+ N D+ YL+ I KTA L S Sbjct: 217 IKLVDKLSNTLDNLIHGELMYVNLNNN-DLYLS-YLYKIYLKTASLISNNISSISHFTNK 274 Query: 175 ------AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 + L + V + L G+++G++FQ+ DD+LDY + +GK I D Sbjct: 275 YTPRYDSQLGIGIFTFSVTTLYNELLYIIGVHIGLSFQMCDDLLDYNSNLEHLGKPILND 334 Query: 229 FRNGKPTLPVILAFQRGT 246 + G TLP+I G+ Sbjct: 335 IKLGLITLPLIYLLNNGS 352 >gi|260906389|ref|ZP_05914711.1| putative geranylgeranyl pyrophosphate synthase [Brevibacterium linens BL2] Length = 354 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 89/314 (28%), Positives = 145/314 (46%), Gaps = 41/314 (13%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDDSALRRGKV--- 95 +GGK +RP L L L R + A ++ +H A ++HDDV+D+ +RRG+ Sbjct: 49 TGGKLIRPRLLLDAHRGLGGRDQAAAVDAACAMQLLHIALVIHDDVIDNDTIRRGEANIS 108 Query: 96 -----------AAR---LVWGNQTSVLVGDFLLSQAFCM-----VIETKSQEALEALSLV 136 A R VWG+ T++L GD +L+ A + V ++K + L+ Sbjct: 109 GEFASDALCRGAGRREAQVWGDATALLGGDLMLTLAHSLLARLEVDDSKRRAILDIFDDT 168 Query: 137 ACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQAL 194 A GE + LS +L+ ++ L + KTAV F A L +++++AG ++ L Sbjct: 169 LFRSAAGEHSDVWLSLHLEEARSQEVLEMAGQKTAVYSFQAPLLIAAVLAGASSTQTAEL 228 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW- 253 + +GI +QL DDVL G+ E GK+ D R GK TL + A R W Sbjct: 229 AAIAAQIGIVYQLRDDVLGLFGDERETGKSNVSDLREGKETLLITFA------RSDPSWP 282 Query: 254 --KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD----SSWK 307 + DG +S + + I+ E+ ALV E Q+ +D R + D S+ Sbjct: 283 EVRPLFGDGTLSDADGDRLRTIIEESGALVFVE---SIITQRCEDLYRLISDAALPSALS 339 Query: 308 KSLMEVVDFCLQRL 321 + L+++ C R+ Sbjct: 340 RQLIQLTSDCSSRI 353 >gi|160901676|ref|YP_001567257.1| polyprenyl synthetase [Petrotoga mobilis SJ95] gi|160359320|gb|ABX30934.1| Polyprenyl synthetase [Petrotoga mobilis SJ95] Length = 288 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 127/257 (49%), Gaps = 14/257 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y I +GGKRLRP + ++ N + +A A+E +H+++L+HDD+ +D++ LRRG Sbjct: 36 YYIENGGKRLRPWIIYNFGQIISINKKNLIDIAIAVEILHSSSLIHDDLPALDNAKLRRG 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV------ACTLAEGELRQ 147 + L +G ++L GD+ + +V + + L LV L +GE+ Sbjct: 96 ALTTHLKFGEYKAILAGDYGFTLPLQIVAGLDNIKEGNKLLLVDYFIKTILKLFQGEMED 155 Query: 148 LSLSK-NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 L K + +V E++ L + KT +F L+AG + + + + G + G++FQ Sbjct: 156 LIFEKEDKNVGEKEILEMYSKKTGAVFGFCFASPFLMAG-EAELAKEMNKIGTDFGVSFQ 214 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 + DD+ D + ++GK +D K TL FQ N + + + K+ N Sbjct: 215 IFDDLKDIFTKEEDIGKETNKDVN--KKTLLNFYNFQETQIIADNIYINVLQ--KLEDLN 270 Query: 267 LKKAFIIMRENRALVDT 283 LK+ +++E R +++T Sbjct: 271 LKELSQLLKEVRKIIET 287 >gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In Complex With Ggpp gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In Complex With Ggpp Length = 293 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 22/202 (10%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + +Y + +GGKR+RP+L +A ++ ACA+E IHT +L+HDD+ D+ Sbjct: 40 IHEAXRYSLLAGGKRVRPVLCIAACELVGGEESLAXPAACAVEXIHTXSLIHDDLPCXDN 99 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRGK V+G +VL GD LLS AF + S E +S A GEL + Sbjct: 100 DDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSE----VSPARVVRAVGELAK 155 Query: 148 ------LSLSKNLDVTEE---------DYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVR 191 L + +D++ E ++L I KTA L A+ + +I G + Sbjct: 156 AIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEI 215 Query: 192 QALKSYGMNLGIAFQLVDDVLD 213 + L+ + +G+ FQ+VDD+LD Sbjct: 216 ERLRKFARCIGLLFQVVDDILD 237 >gi|262274770|ref|ZP_06052581.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] gi|262221333|gb|EEY72647.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] Length = 310 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 20/242 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +K+ GGKR+RP LT T + + A A+E IH +L+HDD+ +D+ L Sbjct: 49 AMKHGALLGGKRVRPFLTYMTGKLFGAPDEALDTPAAAVECIHAYSLIHDDLPAMDNDDL 108 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL------SLVACTLAEGE 144 RRG+ + + +++L GD L + AF ++ E EA L A + A G Sbjct: 109 RRGQPTCHVAFDEASAILAGDALQTLAFTILAEGDLSPEGEAYRIQMVKELAAASGAAG- 167 Query: 145 LRQLSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVR-QALKS 196 + L + LD++ E D L I ++KT L A+ + +L AG + + L + Sbjct: 168 ---MCLGQALDLSAEGKKVDVDTLETIHRNKTGALIRCAVRLGALAAGKKGATYLSQLDT 224 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 + +G+AFQ+ DD+LD + +GK G D K T P +L + ++ ++ Sbjct: 225 FSNAIGLAFQVQDDILDIISDTETLGKPQGSDIAAEKSTYPALLGLEGAQQKAMLLYQEA 284 Query: 257 IN 258 + Sbjct: 285 LQ 286 >gi|93007052|ref|YP_581489.1| polyprenyl synthetase [Psychrobacter cryohalolentis K5] gi|92394730|gb|ABE76005.1| farnesyl-diphosphate synthase [Psychrobacter cryohalolentis K5] Length = 360 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 38/266 (14%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL---------------------LACA 70 D +Y++ GK +RP+L +A+A Y ++ + A A Sbjct: 75 DACRYVMTGTGKLVRPLL-VASAFSSTYSHNDTIADKDNALASLLENDSDYDMCRRAALA 133 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI------ 122 +E +HT +L+HDD+ +DD LRRG+ A +V+ T++L GD L + AF ++ Sbjct: 134 VELLHTYSLVHDDLPCMDDDELRRGQPTAHIVFEESTALLAGDVLQTLAFEVLTADLPTF 193 Query: 123 ----ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 + + + A + G++ L+ +++ D + + KT L AA+ Sbjct: 194 APFDSAIASQLFAIFAPRARRMVSGQMLDLNAEATTGISQNDLEAIHRDKTGALIEAAML 253 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + AG R AL+ ++G+AFQ+ DD+LD + +GK G D + K T Sbjct: 254 MGGICAGATAPQRMALQECAQHIGLAFQVQDDILDVTTSTDTLGKPAGSDEKLDKSTYVK 313 Query: 239 ILAFQRGTKREKNFWKSTINDGKISV 264 ++ G ++ +S +DG+ ++ Sbjct: 314 LM----GVNNATSYAQSLFDDGRAAI 335 >gi|313606489|gb|EFR83338.1| polyprenyl synthetase [Listeria monocytogenes FSL F2-208] Length = 206 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 99/197 (50%), Gaps = 10/197 (5%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLA 68 KD+++V I K I + + VK LI +GGK LRP L +A +Y D V +A Sbjct: 15 KDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVSIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H ATL+HDDVVDDS LRRG +G +V GD+L C I + Sbjct: 75 AALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLF--CICFKILSAHAS 132 Query: 129 ALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++E + + + + GEL Q+ S +VT +YL I KTA LF AL S G Sbjct: 133 SVENIEFNSKNIEKILMGELDQMRTSYKTNVTVREYLTRISGKTAQLF--ALSCYSGATG 190 Query: 186 VQNSVRQALKSYGMNLG 202 + + K Y N+G Sbjct: 191 SKATRMTVAKCY--NIG 205 >gi|300780819|ref|ZP_07090673.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030] gi|300532526|gb|EFK53587.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030] Length = 368 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 84/284 (29%), Positives = 127/284 (44%), Gaps = 32/284 (11%) Query: 34 VKYLIFSGGKRLRPM---LTLATALMLEYRGDNHVLLACAI---EFIHTATLLHDDVVDD 87 ++ + GGKR+RP + A LE ++ + CA+ EFI L+HDD++D Sbjct: 49 LRTFVLGGGKRIRPTFGWVGFVGANGLENTEEDPAAVLCAVSSLEFIQACALIHDDIIDA 108 Query: 88 SALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQAFCMVIETK-SQEAL 130 SA RRG + W G ++LVGD L A M + S AL Sbjct: 109 SATRRGNPTVHVAAAHSHREHNWLGDSDKFGESLAILVGDLALVWADDMWHHSGLSHAAL 168 Query: 131 ----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAG 185 E + + G++ +SL +EE V + KTA L + + IAG Sbjct: 169 LRASEPWRGMRTEVIGGQILDISLEAAGCESEELANAVNRFKTAAYTIERPLHLGAAIAG 228 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + AL+ YG ++GIAFQL DD+L G+ GK G+D R GK T+ A Q Sbjct: 229 ADDDTIAALRRYGHDIGIAFQLRDDILGVFGDPEVTGKPAGDDLREGKRTVLYSRALQAA 288 Query: 246 TKREKNFWKSTINDG---KISVENLKKAFIIMRENRALVDTEYR 286 +R+ + DG ++ + + + I+RE A+ D E R Sbjct: 289 DERDPAA-AQRLRDGIGTALTPDEIAELSGIIRETGAVEDVEKR 331 >gi|303233683|ref|ZP_07320337.1| polyprenyl synthetase [Finegoldia magna BVS033A4] gi|302495117|gb|EFL54869.1| polyprenyl synthetase [Finegoldia magna BVS033A4] Length = 269 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 5/204 (2%) Query: 20 LKRICSDVEMIPDVVKY-LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 LK + + I + +KY L+ G KRLRP+L L T M + A +IE IH + Sbjct: 14 LKELSFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNESISEPMNYALSIELIHNYS 73 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALS 134 L+HDD+ RRGK+ +G +VLVGD LL+ +F ++ E+ E A+ A Sbjct: 74 LVHDDLECMDDDDYRRGKLTVHKKYGEDIAVLVGDALLNYSFEVLSESIKNEVDAMCANY 133 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 +V + G +R L + +++E++ + + KT L A+ + +++ V + L Sbjct: 134 IVKKSGCFGMIRGQLLDIDSEISEDNIIEIYDKKTCNLLKASTVSAGILSKVDDETLLKL 193 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEV 218 ++Y NLG+AFQ++DD++DY ++ Sbjct: 194 ENYAFNLGMAFQIIDDLMDYENDI 217 >gi|300711739|ref|YP_003737553.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3] gi|299125422|gb|ADJ15761.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3] Length = 354 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 79/306 (25%), Positives = 136/306 (44%), Gaps = 21/306 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDVVDDS 88 D + L+ GGKR R ++ L L+L+ G + ++ AC E +H T++ DDV D + Sbjct: 51 DPIWDLLDRGGKRWRAVVCL---LLLDGFGADPRAYLPYACIPEVLHNGTIIVDDVEDGA 107 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 +RRG+ A +G ++ G+ + VI + L + EL + Sbjct: 108 EIRRGEPALHHRFGPDIALNAGNAMYFLPL-KVIGKNPADLDPETQLATYEMLMDELNRT 166 Query: 149 SLSKNLD----------VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L + +D V E +YL + KT L ++++I V + + +Y Sbjct: 167 HLGQGMDIYWHRNRDATVAEAEYLEMCACKTGCLGRIVARLAAIITDQPPEVEREVAAYA 226 Query: 199 MNLGIAFQLVDDVLDYRGEV---NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++ IAFQ+ DD+LD + E GK G D R GK TL VI A + S Sbjct: 227 EDMSIAFQIGDDILDVESTIEGTTEFGKAFGNDIREGKRTLMVIHALSAADPVAADRLSS 286 Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVV 314 ++ + + E + +A I++ ++ A S+ Q A++ LR +P D L Sbjct: 287 ILHKPENTREEITEAIGILQSTDSIEYARECALSFSQSAREHLRDVPLDEERADQLASFT 346 Query: 315 DFCLQR 320 +F ++R Sbjct: 347 EFVIER 352 >gi|296117524|ref|ZP_06836108.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306] gi|295969255|gb|EFG82496.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306] Length = 366 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 82/270 (30%), Positives = 126/270 (46%), Gaps = 31/270 (11%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLA---TALMLEYRGDNHV 65 LK+ E I + + + +E + + I GGKR+RP+ A A L D Sbjct: 27 LKEREPQIAQIGRPVTNAIEHL----ERFILGGGKRIRPLYVWAGFVAADGLLGDEDPQA 82 Query: 66 LL--ACAIEFIHTATLLHDDVVDDSALRRGKVAA---------RLVW-------GNQTSV 107 +L A ++EFI + L+HDD+VD S RRG +L W G ++ Sbjct: 83 VLRAASSLEFIQSCALIHDDIVDASDTRRGNPTVHRAVEAEHRKLGWTGDPEAFGRSAAI 142 Query: 108 LVGDFLLSQAFCMVIETK-SQEAL----EALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162 L+GD L A M++++ SQ AL E + + G+L +SL + E Sbjct: 143 LIGDMSLVWAEDMLLDSGLSQAALQRTREPWRAMRTEVIGGQLLDVSLEAAAIESVELSD 202 Query: 163 HVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 V + KTA L + + IAG + A + YG ++GIAFQL DD L G+ Sbjct: 203 SVNRFKTAAYTIERPLHLGAAIAGAPQKLIDAFRGYGRDIGIAFQLRDDQLGVFGDPKVT 262 Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 GK G+D R GK T+ + +A QR +++ + Sbjct: 263 GKPAGDDLREGKRTVLMAIALQRADEQDPS 292 >gi|261341013|ref|ZP_05968871.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316] gi|288316878|gb|EFC55816.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316] Length = 299 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 79/258 (30%), Positives = 121/258 (46%), Gaps = 36/258 (13%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMHYGALLGGKRLRPFLVYATGNMFGISDATLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVACTLA--- 141 LRRG+ + +G ++L GD L + AF ++ +E + L +S +A Sbjct: 94 LRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMVEVSDRYRLAMVSELAMASGVAG 153 Query: 142 ---------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 E E RQ+ NL+ E + H KT L AA+ + +L AG Q R+ Sbjct: 154 MCGGQALDLEAEGRQV----NLEQLERIHRH----KTGALIRAAVRLGALSAGEQG--RK 203 Query: 193 ALK---SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ ++ Sbjct: 204 ALPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQAQRKA 263 Query: 250 KNFWKSTINDGKISVENL 267 ++ I D + S+ L Sbjct: 264 RDL----IEDARQSLSQL 277 >gi|15889973|ref|NP_355654.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58] gi|15157936|gb|AAK88439.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58] Length = 304 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 110/215 (51%), Gaps = 10/215 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + +++ + +GGKRLRP L + + +L + + + A+E +H +L+HDD+ Sbjct: 44 EAMRHGVLNGGKRLRPFLVIESVALLGGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDD 103 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-- 147 LRRG+ + T++L GD LL+ AF ++ + A E + + +LA Sbjct: 104 LRRGQPTVHRKFDEATAILAGDSLLTLAFDIIASDDNPLAAERKAALVISLARAAGIGGM 163 Query: 148 -----LSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 L L+ +ED + +++ KT L A E ++IAG + RQ L+ +G + Sbjct: 164 AGGQALDLAAEKKAPDEDGIITLQAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKI 223 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G++FQL DD+LD + MGK G+D GK TL Sbjct: 224 GLSFQLADDLLDLTADAATMGKATGKDAARGKGTL 258 >gi|331701507|ref|YP_004398466.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929] gi|329128850|gb|AEB73403.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929] Length = 297 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 37/283 (13%) Query: 12 MEKVNFLILKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LA 68 + K+N ++ I D + + + Y + +GGKRLRP+LTLA L D VL + Sbjct: 13 VPKINQILENDIKPDTDQTTLEAAMIYSVNAGGKRLRPLLTLAVLASLGDPIDQTVLKTS 72 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 CA+E +H+ +L+HDD+ +D+ LRRGK + +G + L GD L AF +++ Sbjct: 73 CALELMHSYSLIHDDLPAMDNDDLRRGKPTNHVKFGAGMATLAGDGLQPLAFQWLVDNDL 132 Query: 127 QEALEALSLVACTLAEG--------------ELRQLSLS--KNLDVTEEDYLHVIKSKTA 170 +A +A A G E +LSLS + LD ++KT Sbjct: 133 DSQTQAELTLALAKAAGPHGMVSGQADDIEFEGTRLSLSGLQKLD----------RNKTG 182 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L A+E ++ V R++L ++ G A+Q+ DD+LD G E+GK + +D Sbjct: 183 ALIRYAVEAGLIMGRVIPEKRKSLLTFAEKFGEAYQIYDDILDVVGTEAEIGKPVHQDAN 242 Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 K T P +L G + T+ D + ++ ++A I Sbjct: 243 --KNTYPNLL----GLAKSYEMLNQTVADAQQALATAREALSI 279 >gi|203284235|ref|YP_002221975.1| octaprenyl-diphosphate synthase [Borrelia duttonii Ly] gi|201083678|gb|ACH93269.1| octaprenyl-diphosphate synthase [Borrelia duttonii Ly] Length = 348 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 27/237 (11%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRG---DNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +I GGKR+RPML + A L Y +N ++ +E H+ +L+ DD+ D + RRG Sbjct: 53 IINRGGKRIRPMLMILLAHALGYNNSDTENLYKISMLLELPHSGSLIIDDIEDGALKRRG 112 Query: 94 KVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 K + L++G S+ + + L K+ + L TL+ L L Sbjct: 113 KPSIHLIYGLDNSINTANLIYFLPAKLIQTSNLKTSQKLIIYENFFTTLS-----NLHLG 167 Query: 152 KNLDVTE---------EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + +D+T E+Y+ +++ KT+ LF A ++ ++ +N + ++ +N+G Sbjct: 168 QGIDITLHNGTYIPSIEEYISLVEHKTSSLFGMAGFLAGILTNNENKAKNLYNTF-LNIG 226 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 FQ++DD+ + + V GK+ G+D GK +LP+I REKNF I++ Sbjct: 227 TYFQMIDDIKNIKDGVK--GKDFGDDLIEGKKSLPIIYFL-----REKNFDNKIIHE 276 >gi|256832658|ref|YP_003161385.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603] gi|256686189|gb|ACV09082.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603] Length = 368 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 86/324 (26%), Positives = 147/324 (45%), Gaps = 50/324 (15%) Query: 38 IFSGGKRLRPMLTLATALMLEYRG----------DNHVLLACAIEFIHTATLLHDDVVDD 87 + SGGKR+R +L + +RG ++ + A+E A L HDDV+D Sbjct: 52 LTSGGKRVRALL-----MYHVFRGIESGRSGLSDEDLYGVGAALELFQAAALFHDDVMDR 106 Query: 88 SALRRGKVAARLV----------------WGNQTSVLVGDFLL---SQAFCMVI-----E 123 S RRG+ V +G ++L+GD L Q F Sbjct: 107 SDTRRGEPTVHRVFAQRHRTSQWVGDPDLYGQSAAILLGDLSLVASEQLFRSATAPGQHR 166 Query: 124 TKSQEALEALSLVACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS--AALEV 179 +++++ +A+ ++ + + + LS + D + L VI +KT +S A L + Sbjct: 167 SRARDHFDAMRMIVTVGQFMDTHAQVVPLSDDDDAMQR-ALDVIATKT-THYSVVAPLLI 224 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + +AG V + L+++G LG AFQL+DD L G+ + GK G+D R GK T+ +I Sbjct: 225 GAALAGAPTRVDEQLRAFGQPLGTAFQLIDDDLGLYGDPAQTGKPSGDDLREGKRTVVLI 284 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN---RALVDTEYRAYSYGQKAKD 296 A +R + E++ S I + + +A I+ + +A +D A+ +A D Sbjct: 285 EALRRASHAEQHTLGSVIVGDHHDEDTIAQALDIIESSGARQATLDRARAAHDKALRALD 344 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 + DS ++ L + DF LQR Sbjct: 345 KVELSADS--RQHLRTMTDFILQR 366 >gi|153870661|ref|ZP_02000013.1| Polyprenyl synthetase [Beggiatoa sp. PS] gi|152072868|gb|EDN69982.1| Polyprenyl synthetase [Beggiatoa sp. PS] Length = 296 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 126/252 (50%), Gaps = 20/252 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSA 89 + ++Y +F+GGKR+RP+L T L + A A+E IH +L+H +DD Sbjct: 34 EAMRYSVFNGGKRVRPLLVYLTGAALNVNPISLDAPASAVELIHAYSLVHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--------IETKSQEALEALSLVACT-- 139 LRRGK + T++L GD L + AF ++ + + E +E L+L + + Sbjct: 94 LRRGKPTCHKAFDEATAILAGDALQTLAFYVLSHDNNLQNSDKRRLEMIETLALASGSRG 153 Query: 140 LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV-QNSVRQALKSY 197 +A G+ + S+ ++L+V E + +H+ KT L A++++ +L V + + + L Y Sbjct: 154 MAGGQAIDMESVGRSLNVAELENMHI--HKTGALIRASVKMGALACNVIEVNQLEKLDHY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD +GK G D + K T P +L G + K + I Sbjct: 212 AKCIGLAFQIQDDILDVESSTTVLGKAQGADIAHNKVTYPSLL----GLNQAKQMAQELI 267 Query: 258 NDGKISVENLKK 269 D S+ N + Sbjct: 268 TDAITSLTNFDQ 279 >gi|146319308|ref|YP_001199020.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] gi|146321511|ref|YP_001201222.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33] gi|253752341|ref|YP_003025482.1| geranyltranstransferase [Streptococcus suis SC84] gi|253754167|ref|YP_003027308.1| geranyltranstransferase [Streptococcus suis P1/7] gi|253756101|ref|YP_003029241.1| geranyltranstransferase [Streptococcus suis BM407] gi|145690114|gb|ABP90620.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] gi|145692317|gb|ABP92822.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33] gi|251816630|emb|CAZ52270.1| putative geranyltranstransferase [Streptococcus suis SC84] gi|251818565|emb|CAZ56398.1| putative geranyltranstransferase [Streptococcus suis BM407] gi|251820413|emb|CAR47048.1| putative geranyltranstransferase [Streptococcus suis P1/7] gi|292558940|gb|ADE31941.1| Polyprenyl synthetase [Streptococcus suis GZ1] gi|319758742|gb|ADV70684.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14] Length = 289 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 122/236 (51%), Gaps = 17/236 (7%) Query: 34 VKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 V Y + +GGKR+RP+L T+ + +E + ++ + AC +E IHT +L+HDD+ +D+ Sbjct: 29 VLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC-VELIHTGSLIHDDLPAMDNDD 87 Query: 90 LRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEAL---EALSLVACT--LAE 142 RRG++ V+ T++L GD FL F ++ ++ L LS + T + Sbjct: 88 YRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQVDLPAETILALVRELSQASGTFGMVA 147 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G++ ++ + ++T E + +KT L + + LIAG + V L+ G +G Sbjct: 148 GQVLDMA-GEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQSDVVINHLRQAGQLIG 206 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +AFQ+ DD+LD E+GK +D K T P ++ G + K F + ++N Sbjct: 207 LAFQVRDDILDVTATFEEIGKTPQKDVLAEKSTYPALM----GLEASKVFLEDSLN 258 >gi|317012738|gb|ADU83346.1| geranyltranstransferase IspA [Helicobacter pylori Lithuania75] Length = 303 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 139/273 (50%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCSLVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 LRR + T+VL+GD L + +F E S LE+ + LV G + Sbjct: 101 TLRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESPIIVELVKILSTNGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G++N + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKNEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ G+ FQ++DD++D + E GK D + K + +L ++ + Sbjct: 215 AFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLEKANDYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK A+ +++EN AL++T ++ Sbjct: 273 VLNDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|255513726|gb|EET89991.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 383 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 13/217 (5%) Query: 46 RPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT 105 RPML + TALM + + +LLA A++ L+HDD+ D S +RRG ++G+ Sbjct: 88 RPMLLMLTALMYDNQDPATLLLAAAVQLSQEWILIHDDIEDKSEMRRGMPTLHKLYGSSA 147 Query: 106 SVLVGDFLLSQAFCMVIE---TKSQEALEALS----LVACTLAEGELRQLSLSKNLD--- 155 ++ +GD L S + M I+ + E E L VA + A G+ ++L+ D Sbjct: 148 ALHIGDVLHSVMWNMFIDYLGVANPEIRERLYNKFIEVAYSTASGQFQELNFMYGKDGLR 207 Query: 156 -VTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 E Y + KT+ L++ ++ AG ++ + L + G N GIAFQ+ DD++D Sbjct: 208 SAKESTYFEIASGKTSSYSMRGPLQLGAISAGQDENIVEKLGAIGENAGIAFQINDDIID 267 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + N GK D R GK TL + F + EK Sbjct: 268 MQKGYNS-GKGEFNDIREGKLTLIIKHTFDLASDDEK 303 >gi|203287773|ref|YP_002222788.1| octaprenyl-diphosphate synthase [Borrelia recurrentis A1] gi|201084993|gb|ACH94567.1| octaprenyl-diphosphate synthase [Borrelia recurrentis A1] Length = 348 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 27/249 (10%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---DNHVLLACAIEFIHTATLLH 81 S + I V +I GGK++RPML + A L Y +N L+ +E H+ +L+ Sbjct: 41 STINAIQAPVIEIINRGGKKIRPMLMILLAHALGYNNSDTENLYKLSMLLELPHSGSLII 100 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACT 139 DD+ D + RRGK + L++G S+ + + L K+ + L T Sbjct: 101 DDIEDGALKRRGKPSIHLIYGLDNSINTANLIYFLPAKLIQTSNLKTSQKLIIYENFFTT 160 Query: 140 LAEGELRQLSLSKNLDVTE---------EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 L+ L L + +D+T E+Y+ +++ KT+ LF A ++ ++ +N Sbjct: 161 LS-----NLHLGQGIDITLHNGTYIPSIEEYISLVEHKTSSLFGMAGFLAGILTNNENKA 215 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + ++ +N+G FQ++DD+ + + V GK+ G+D GK +LP+I REK Sbjct: 216 KNLYNTF-LNIGTYFQMIDDIKNIKDGVK--GKDFGDDLIEGKKSLPIIYFL-----REK 267 Query: 251 NFWKSTIND 259 NF I++ Sbjct: 268 NFDNKIIHE 276 >gi|307708727|ref|ZP_07645190.1| geranyltranstransferase [Streptococcus mitis NCTC 12261] gi|307615301|gb|EFN94511.1| geranyltranstransferase [Streptococcus mitis NCTC 12261] Length = 291 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 82/287 (28%), Positives = 135/287 (47%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALQVA 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + ++ + SQ + + LSL + +L EGE + LSL E+ Sbjct: 117 PYALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELSPEMQAKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L G K F T++ +E + + Sbjct: 229 KTPQKDLQAEKSTYPALL----GLKEAIAFCNQTLDQANAKLEEIAQ 271 >gi|219685642|ref|ZP_03540457.1| octaprenyl-diphosphate synthase [Borrelia garinii Far04] gi|219672830|gb|EED29854.1| octaprenyl-diphosphate synthase [Borrelia garinii Far04] Length = 347 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 115/221 (52%), Gaps = 22/221 (9%) Query: 37 LIFSGGKRLRPMLT--LATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRG 93 +I GGKR+RPM+ LA AL L+ + D + L+ +E H+ +L+ DD+ D+S RRG Sbjct: 53 IINRGGKRIRPMIMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIEDNSLKRRG 112 Query: 94 KVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 A L++G S+ G+ + L K + L TL+ L L Sbjct: 113 GSAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLS-----NLHLG 167 Query: 152 KNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + +D+ + ++Y+ +++ KTA LF A ++++I ++ ++ ++ + LG Sbjct: 168 QGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKIYSTF-LKLG 226 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + FQ++DD+ + + ++N GK G+D GK +LP+I Q Sbjct: 227 VYFQIIDDIKNIKNKIN--GKEFGDDLIEGKKSLPIIYFLQ 265 >gi|239814577|ref|YP_002943487.1| polyprenyl synthetase [Variovorax paradoxus S110] gi|239801154|gb|ACS18221.1| Polyprenyl synthetase [Variovorax paradoxus S110] Length = 305 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 114/219 (52%), Gaps = 13/219 (5%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 ++ D ++Y + GGKRLRP+L LA + + + ACA E IH +L+HDD+ +D Sbjct: 40 LLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNAAAALRAACATELIHAYSLVHDDLPSMD 99 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEAL-EALSLVACT 139 + LRRGK + +G ++L GD L + AF ++ I Q AL L+ A + Sbjct: 100 NDVLRRGKPTVHVKFGEADALLAGDALQALAFELLTPEGDEIPASIQAALCRLLARAAGS 159 Query: 140 --LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKS 196 +A G+ L+ S L + E + + KT L ++E+ + AG AL+ Sbjct: 160 QGMAGGQAIDLA-SVGLALDEAQLREMHRLKTGALLQGSVEMGAACAGAVAPAALSALRD 218 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 YG +G+AFQ+VDD+LD + +GK G+D KPT Sbjct: 219 YGAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPT 257 >gi|223932932|ref|ZP_03624927.1| Polyprenyl synthetase [Streptococcus suis 89/1591] gi|223898378|gb|EEF64744.1| Polyprenyl synthetase [Streptococcus suis 89/1591] Length = 289 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 122/236 (51%), Gaps = 17/236 (7%) Query: 34 VKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 V Y + +GGKR+RP+L T+ + +E + ++ + AC +E IHT +L+HDD+ +D+ Sbjct: 29 VLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC-VELIHTGSLIHDDLPAMDNDD 87 Query: 90 LRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEAL---EALSLVACT--LAE 142 RRG++ V+ T++L GD FL F ++ ++ L LS + T + Sbjct: 88 YRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQVDLPAETILALVRELSQASGTFGMVA 147 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G++ ++ + ++T E + +KT L + + LIAG + V L+ G +G Sbjct: 148 GQVLDMA-GEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQSDVVINHLRQAGQLIG 206 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +AFQ+ DD+LD E+GK +D K T P ++ G + K F + ++N Sbjct: 207 LAFQVRDDILDVTATFEEIGKTPQKDVLAEKSTYPALM----GLEASKVFLEDSLN 258 >gi|325294094|ref|YP_004279958.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium sp. H13-3] gi|325061947|gb|ADY65638.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium sp. H13-3] Length = 324 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 14/217 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D +++ + +GGKRLRP L + + +L + + A+E +H +L+HDD+ Sbjct: 64 DAMRHGVLNGGKRLRPFLVIESTALLGGNAEAAHHVGAALECLHCYSLVHDDLPAMDDDD 123 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA-------- 141 LRRG+ + T++L GD LL+ AF ++ + LEA A L+ Sbjct: 124 LRRGQPTVHRKFDEATAILAGDSLLTLAFDII--ASDENPLEADRKAALVLSLARAAGIG 181 Query: 142 -EGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + L L+ + +E + +++ KT L A E ++IAG S RQ L+ +G Sbjct: 182 GMAGGQALDLAAEKNAPDEAGIITLQAMKTGALLRFACEAGAIIAGSDVSERQRLRLFGE 241 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +G+AFQL DD+LD + MGK G+D GK TL Sbjct: 242 KIGLAFQLADDLLDLTADAATMGKATGKDAARGKGTL 278 >gi|307611173|emb|CBX00817.1| hypothetical protein LPW_25211 [Legionella pneumophila 130b] Length = 298 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 15/240 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L I I + Y +FSGGKR+RP+L +++ + ++A A+E H + Sbjct: 20 LLNEIVIPAPQIRSALHYALFSGGKRIRPILVYLAGDLIDVDQEVLDIIAAALELTHCYS 79 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +D+ LRRGK + + T++LVGD + + A +V+ + L A +V Sbjct: 80 LIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVVL-MRLSPLLPAAQVV 138 Query: 137 ACT-----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-VSSLIA 184 A T + G+ LS VTEE + KT L A E V + Sbjct: 139 AITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLRGIHLLKTGKLILACFEMVLAAQH 198 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V ++ AL++YG ++G+ FQ+ DD LD +GK D N K T + Q+ Sbjct: 199 EVSEQIKSALRTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSSDQANQKTTFATLFNKQQ 258 >gi|260185898|ref|ZP_05763372.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis CPHL_A] gi|289446570|ref|ZP_06436314.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis CPHL_A] gi|289419528|gb|EFD16729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis CPHL_A] Length = 325 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 20 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 79 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L G + + A + EA Sbjct: 80 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGGYRFATA-SQLASRLDPEAF 138 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E YL V+ KT L +A+ ++ + ++G Sbjct: 139 AVVAEAFAELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQ 198 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + G +G AF++ D++ G+ + G D TLP++ A RE+ Sbjct: 199 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYAL-----REQ 250 Query: 251 NFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 S + + G I +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 251 TPDTSRLRELLAGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 310 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 311 RALATLIDHAV 321 >gi|209883275|ref|YP_002287132.1| geranyltranstransferase [Oligotropha carboxidovorans OM5] gi|209871471|gb|ACI91267.1| geranyltranstransferase [Oligotropha carboxidovorans OM5] Length = 312 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 13/229 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y +GGKRLRP L +A+A + + ++ A+E IH +L+HDD+ +D+S Sbjct: 50 EAMRYSSLNGGKRLRPFLVVASAAIFNVPREGALMAGAALECIHCYSLIHDDLPSMDNSD 109 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGELRQL 148 LRRG+ + + T++L GD LL+ AF ++ + ++ L L + + Sbjct: 110 LRRGRPTSHKKFDEATAILAGDSLLTLAFDIITRDEVHRDPTVRLLLTRALARAAGIGGM 169 Query: 149 SLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + +D+ E D + + KT L +L+ AL +YG Sbjct: 170 AGGQIMDLAGEGRFGDKEPPDVAKLQQMKTGALLKYGCIAGALLGQASKDQYAALDAYGH 229 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 G AFQ+ DD+LD G+ +GK G+D GK T L G KR Sbjct: 230 AFGEAFQIADDLLDVEGDAAALGKPAGQDAALGKTTFVTQLGID-GAKR 277 >gi|317178721|dbj|BAJ56509.1| geranyltranstransferase [Helicobacter pylori F30] Length = 303 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 141/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMVLGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D K + +L + + + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--GVKNSFVNLLGLEEASGYAQALKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK A+ +++EN AL++T ++ Sbjct: 273 VLNDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|89099928|ref|ZP_01172799.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. NRRL B-14911] gi|89085320|gb|EAR64450.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. NRRL B-14911] Length = 788 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 128/258 (49%), Gaps = 18/258 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC--AIEFIHTATLLHDDVV 85 E + + Y + +GGKRLRP++ + Y + L+ ++E++HTA+L+ DD+ Sbjct: 526 EPVREAANYSLAAGGKRLRPVIAWFVGVEA-YGMEETALMPLLRSLEYMHTASLIFDDLP 584 Query: 86 --DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLVACTL 140 D++ RRGK A V+G + L G +L +A + + LE + A + Sbjct: 585 AQDNAPSRRGKAAVHEVYGTAAAELSGLYLTQKAMEDQASLTSSTPDAVLELIRYTARST 644 Query: 141 AE---GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 AE G+ L + K L E D L K T + F A++ + +++AG + LK Sbjct: 645 AEMCRGQAMDLEAKGKALTAGELDALCFYK--TGIAFEASIIMPAILAGAEQDEIDVLKK 702 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 + + GIAFQ+ DD+LD G+ +GK +G D RN K T L + G KR + W+ Sbjct: 703 FARHAGIAFQIRDDLLDVEGDPMLLGKPVGTDRRNQKETYVSALG-KDGAKR--SMWEHY 759 Query: 257 INDGKISVENLKKAFIIM 274 + ++ ++ L+ F + Sbjct: 760 CSAAEL-LQELRAEFAFL 776 >gi|212709179|ref|ZP_03317307.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM 30120] gi|212688091|gb|EEB47619.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM 30120] Length = 305 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 78/242 (32%), Positives = 119/242 (49%), Gaps = 20/242 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSAL 90 +KY GGKRLRP LT A ML DN A A+E IH +L+H +DD L Sbjct: 41 AMKYGTLLGGKRLRPFLTYAVGEMLGVSLDNLDAPAAAVECIHAYSLIHDDLPAMDDDDL 100 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-------IETKSQEALEALSLVACTLA-- 141 RRG+ + +G +VL GD L + AF ++ + K + A+ A A LA Sbjct: 101 RRGQPTCHIKFGEGNAVLAGDALQTFAFQLLSSASMPDVSDKDRIAMIAELAYASGLAGM 160 Query: 142 -EGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS--- 196 G+ L + K +D+ + +H + KT L AA+ + + AG + QAL + Sbjct: 161 CGGQALDLDAEGKRVDLVSLERIH--QHKTGALIRAAIRLGAYAAGHKG--YQALTNLDK 216 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y ++G+AFQ+ DD+LD G+ GK G D ++ K T P +L + ++ K ++ Sbjct: 217 YAESIGLAFQVQDDILDVIGDSAVTGKRQGADEQHEKSTYPSLLGLEAAQEKAKELYQDA 276 Query: 257 IN 258 I Sbjct: 277 IT 278 >gi|27228290|gb|AAN85596.1| Geranylgeranyl Pyrophosphate Synthase [Pantoea stewartii] Length = 303 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 28/212 (13%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDDSALRRGKVAA 97 GKR+RPML L TA L + LL ACA+E +H A+L+ DD+ +DD+ +RRG+ Sbjct: 52 GKRIRPMLLLLTARDLGCAISHGGLLDLACAVEMVHAASLILDDMPCMDDAQMRRGRPTI 111 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL------RQLSLS 151 +G ++L LLS+AF ++ E E L+ +A T A EL + L Sbjct: 112 HTQYGEHVAILAAVALLSKAFGVIAEA------EGLTPIAKTRAVSELSTAIGMQGLVQG 165 Query: 152 KNLDVTEED-------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + D++E D L + KT+ LF A+ +++S+ A R+ L + ++LG A Sbjct: 166 QFKDLSEGDKPRSADAILLTNQFKTSTLFCASTQMASIAANASCEARENLHRFSLDLGQA 225 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 FQL+DD+ D + + GK+I +D GK TL Sbjct: 226 FQLLDDLTDG---MTDTGKDINQD--AGKSTL 252 >gi|160945195|ref|ZP_02092421.1| hypothetical protein FAEPRAM212_02714 [Faecalibacterium prausnitzii M21/2] gi|158442926|gb|EDP19931.1| hypothetical protein FAEPRAM212_02714 [Faecalibacterium prausnitzii M21/2] gi|295105573|emb|CBL03117.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii SL3/3] Length = 293 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 10/213 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +Y + GGKR+R +LTL+ ML A A+E +H +L+HDD+ +D+ L Sbjct: 35 AARYSLLGGGKRIRAILTLSVCDMLGGEMQVAAQFAAAVEMLHCYSLIHDDLPCMDNDDL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG+ + + T++L GD LL++AF VI S ++ A R + Sbjct: 95 RRGRPSCHKAFSESTAMLAGDVLLTEAF-EVIANASATPQICVAAARALGAGAGSRGMVY 153 Query: 151 SKNLDV-------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + LD+ TEE + ++KT L +AA+++ + AG + L SY LG+ Sbjct: 154 GQELDLKYEALAATEEQLRLIHRNKTGALINAAVQMGAAAAGATPQQCKILASYAYGLGL 213 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 FQ+VDDVLD ++GK IG D NGK T Sbjct: 214 VFQIVDDVLDVTSTPEQLGKPIGSDSENGKTTF 246 >gi|166709970|ref|ZP_02241177.1| farnesyl diphosphate synthase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 332 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 73/249 (29%), Positives = 123/249 (49%), Gaps = 21/249 (8%) Query: 13 EKVNFLILKRICSDVEMIPDVV---KYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--L 67 ++V ++ +R+C+ E +++ +Y GGKR R +L LA + + HVL + Sbjct: 34 QRVEQVLARRLCAGNEESTELMTAMRYATLQGGKRTRALLCLAAGALADTPA--HVLDDI 91 Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 AIE +H TL+HDD+ +D+ LRRG + +G T++LVGD L + AF + Sbjct: 92 GAAIEMMHACTLVHDDLPAMDNDVLRRGLPTVHVKFGEATAILVGDALQAHAFLTLAGVD 151 Query: 126 SQEALE-------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 + + A ++ A A G+ ++L V + + + + K+ L A++ Sbjct: 152 ASGEIRIALVRELAHAVSADGAAGGQAMDMALVGQ-SVGLDTIMAMHRMKSGALVRASVR 210 Query: 179 VSSLIA----GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + +L A GV + AL Y G+A Q+VDD+LD +V +GK G+D KP Sbjct: 211 MGTLCALPEGGVHAELAAALDRYSACFGLALQVVDDILDATADVATLGKTPGKDAATDKP 270 Query: 235 TLPVILAFQ 243 T I+ Q Sbjct: 271 TCASIMGLQ 279 >gi|317053956|ref|YP_004117981.1| Polyprenyl synthetase [Pantoea sp. At-9b] gi|316951951|gb|ADU71425.1| Polyprenyl synthetase [Pantoea sp. At-9b] Length = 301 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 139/261 (53%), Gaps = 28/261 (10%) Query: 18 LILKRICSDVE-MIP-----DVVKYLIFSG----GKRLRPMLTLATA--LMLEYRGDNHV 65 L+ +R+ S +E ++P D V+ + +G GKR+RP+L L A + + + + Sbjct: 17 LLHQRLQSHLEQLLPCGQQADQVRAAMRAGTLAPGKRIRPLLLLLAAHDMGCDSQQPGLL 76 Query: 66 LLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI- 122 LACA+E +H A+L+ DD+ +D++ +RRG+ +G ++L LLS+AF ++ Sbjct: 77 DLACAVEMVHAASLILDDIPSMDNAQMRRGRPTVHREFGANVAILAAIALLSRAFEVIAL 136 Query: 123 -----ETKSQEALEALSLVAC--TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 + +A+ LS L +G+ + L + E L + KT+VLF A Sbjct: 137 APGLAAQRKSDAIAELSAAVGLQGLVQGQFQDLHDGAHARSAEAIEL-TNELKTSVLFRA 195 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L+++++ A +VRQ L ++ +LG+AFQL+DD+ D G+ + GK+ +D GK T Sbjct: 196 TLQMAAIAANASPTVRQNLSAFAQDLGLAFQLLDDLTD--GDTH-TGKDRHQD--QGKST 250 Query: 236 LPVILAFQRGTKREKNFWKST 256 L +L + +R ++ +S Sbjct: 251 LVTMLGTEGAERRLRDHLRSA 271 >gi|210631749|ref|ZP_03296991.1| hypothetical protein COLSTE_00876 [Collinsella stercoris DSM 13279] gi|210159869|gb|EEA90840.1| hypothetical protein COLSTE_00876 [Collinsella stercoris DSM 13279] Length = 346 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 9/221 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + + + GGKR+RP+L L A + + + AIE +A L+HDD+ D S LR Sbjct: 51 EPLAHFTAGGGKRVRPVLALLGAEAVGGCAEQALSSGVAIELFQSAALIHDDIADASELR 110 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA------LEALSLVACTLAEGEL 145 RG+ G ++ GD L++ F +V+ S L+ L + EG+ Sbjct: 111 RGEPCLYRTHGEGLAINAGDLALTRVFEVVLNDASLPGDRRLRVLDELVRMERHTLEGQA 170 Query: 146 RQLSLSKN--LDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 L +++ DVT DYL++I+ KTA ++ L + +L AG + L G G Sbjct: 171 LDLGWARDGRWDVTSSDYLYMIEGKTAWYTVASPLRIGALAAGAADEAACELVELGRPAG 230 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +AFQL DD+L+ G+ + GK+ D GK TL V+ A + Sbjct: 231 LAFQLQDDLLNLVGDASAQGKDFRSDITEGKRTLAVVWALE 271 >gi|261856267|ref|YP_003263550.1| polyprenyl synthetase [Halothiobacillus neapolitanus c2] gi|261836736|gb|ACX96503.1| Polyprenyl synthetase [Halothiobacillus neapolitanus c2] Length = 309 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 19/219 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGD----NHVLL------ACAIEFIHTATLLH 81 D + + + GGKRLRP+L + A + G N L A AIE IH +L+H Sbjct: 44 DAIGHAVIDGGKRLRPILVVLGASLDSTPGSLPDPNDPRLEQLWNAAVAIELIHGYSLIH 103 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 DD+ +D+ LRRGK V+ T++L GD L S AF ++ + + L+ V+ Sbjct: 104 DDLPSMDNDDLRRGKPTVHRVFDEATAILAGDALQSLAFSLLADAPQTDVKTRLNWVSL- 162 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV--LFSAALEVSSLIAGVQNSV---RQAL 194 L+ G R + + LD+ + + T + L + AL ++L+ G S R AL Sbjct: 163 LSTGANR-MVFGQQLDLNPPAQIPALAELTRMHELKTGALLYAALMMGANQSSAEDRAAL 221 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 +++ LG+AFQ+ DD+LD G ++GK G+D + K Sbjct: 222 EAFIRPLGLAFQIQDDILDATGTAEQLGKTPGKDAADHK 260 >gi|108563335|ref|YP_627651.1| geranyltranstransferase [Helicobacter pylori HPAG1] gi|107837108|gb|ABF84977.1| geranyltranstransferase [Helicobacter pylori HPAG1] Length = 303 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 141/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 +LRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 SLRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ G+ FQ++DD++D + E GK D + K + +L ++ + Sbjct: 215 AFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLEKANDYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK A+ +++EN AL++T ++ Sbjct: 273 ILNDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|291544838|emb|CBL17947.1| farnesyl-diphosphate synthase [Ruminococcus sp. 18P13] Length = 297 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 15/232 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA 89 + ++Y + +GGKR+RP+L LA GD L A AIE IHT +L+HDD+ Sbjct: 38 EAMRYSLEAGGKRIRPLLVLA--FCRACGGDVQKALKPALAIEMIHTYSLIHDDLPAMDD 95 Query: 90 L--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA----CTLAEG 143 RRG+++ + T++L GD L F ++ + A +SL+A AEG Sbjct: 96 DDYRRGRLSCHKAFDEATAILAGDALNVLPFELLSTDTTLPAETRVSLIAELANAAGAEG 155 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 ++ ++ DV + + +++ KT L A + ++AG + + A Y Sbjct: 156 MIGGQVIDIANETRTDVDQNNLVNMYAHKTGALIRVACTMGCMVAGANDKMLTAATEYAQ 215 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 LG+AFQ+VDD+LD G +GK IG D + K T +L + G K E + Sbjct: 216 RLGLAFQIVDDILDVTGTPELLGKPIGSDAAHHKTTFVTLLGLE-GAKAEAS 266 >gi|157369322|ref|YP_001477311.1| geranyltranstransferase [Serratia proteamaculans 568] gi|157321086|gb|ABV40183.1| Polyprenyl synthetase [Serratia proteamaculans 568] Length = 306 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 16/228 (7%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGKRLRP L T M +N A A+E IH +L+HDD+ LRRG+ Sbjct: 50 GGKRLRPFLVYTTGQMFGVSLNNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCH 109 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQLSLSKNLDV 156 + +G ++L GD L + AF ++ + + + + L++V+ + + ++LD+ Sbjct: 110 IKFGEANAILAGDALQTLAFSILADAEMPDVALCDRLAMVSELATASGVAGMCGGQSLDL 169 Query: 157 TEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL---KSYGMNLGIAFQ 206 ED + + KT L AA+ + +L AG R AL Y +G+AFQ Sbjct: 170 EAEDRQIGLEALEQIHRHKTGALIRAAVRLGALAAG--EPGRAALVQLDRYAAAIGLAFQ 227 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + DD+LD GE ++GK G D ++GK T P +L + + ++ Sbjct: 228 VQDDILDVVGETEKIGKRQGADQQHGKSTYPALLGLDSAKAKAWDLYQ 275 >gi|15599238|ref|NP_252732.1| geranyltranstransferase [Pseudomonas aeruginosa PAO1] gi|107103557|ref|ZP_01367475.1| hypothetical protein PaerPA_01004627 [Pseudomonas aeruginosa PACS2] gi|218889676|ref|YP_002438540.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58] gi|9950239|gb|AAG07430.1|AE004821_3 geranyltranstransferase [Pseudomonas aeruginosa PAO1] gi|218769899|emb|CAW25660.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58] Length = 295 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 137/271 (50%), Gaps = 21/271 (7%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 +++ + + ++Y + +GGKR+RP+L A L ACA+E IH +L+HDD+ Sbjct: 27 ELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLP 86 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQE---ALEALSLVA- 137 LRRG+ + T++L D L + AF ++ +T+ QE LE L+ +A Sbjct: 87 AMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLAR 146 Query: 138 ----CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVR 191 + G+ L S+ LD + +H + KT L A++ + +L +G + + Sbjct: 147 AAGSAGMVGGQAIDLGSVGVALDQAALEVMH--RHKTGALIEASVRLGALASGRAEPASL 204 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--RGTKRE 249 AL+ Y +G+AFQ+ DD+LD + +GK G+D + KPT P +L + +G E Sbjct: 205 AALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALE 264 Query: 250 -KNFWKSTINDGKISVENLKK--AFIIMREN 277 ++ + ++ S + L++ +I+ R N Sbjct: 265 LRDLALAALDGFPPSADPLRQLARYIVERRN 295 >gi|226356385|ref|YP_002786125.1| polyprenyl synthetase [Deinococcus deserti VCD115] Length = 341 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 20/254 (7%) Query: 41 GGKRLRPMLTLATALMLEYRG--------DNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 GGK +R L LA+A + G D LA +E L+HDD+ DDS RR Sbjct: 48 GGKGIRSELLLASA---QAHGVAHDTDAWDQAQWLAAGLELFQNWVLIHDDIQDDSEERR 104 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL-- 150 G+ A ++G ++ VGD L + + V A+E + AEG+ LS Sbjct: 105 GQPALHRLYGVPLAINVGDALHAYMWAAVHRAGVPGAMEEFLTMIHRTAEGQHLDLSWVE 164 Query: 151 SKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E DYL +++ KTA L + +L AGVQ + A + G+ LG AFQ+ D Sbjct: 165 HREWKLREADYLEMVQLKTAHYTVIVPLRLGALAAGVQPA--SAFTNAGLALGSAFQIRD 222 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 DVL+ G+ + GK IG D GK TL V+ + ++ + + + + K Sbjct: 223 DVLNLLGDPLKYGKEIGGDLLEGKRTLIVLRWLAQAPAEQREVFLDQMRRDRAA----KD 278 Query: 270 AFIIMRENRALVDT 283 +I + +R L+D+ Sbjct: 279 PAVIAQIHRWLLDS 292 >gi|154707047|ref|YP_001424692.1| dimethylallyltransferase [Coxiella burnetii Dugway 5J108-111] gi|154356333|gb|ABS77795.1| dimethylallyltransferase [Coxiella burnetii Dugway 5J108-111] Length = 267 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 102/209 (48%), Gaps = 9/209 (4%) Query: 13 EKVNFLILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 E++N L I D+ P + + Y + SGGKR+RP+ T AT E A Sbjct: 9 ERINHK-LGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAA 67 Query: 69 CAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 CAIE +H +L+H +DD RRGK + + T++L GD L AF ++ + Sbjct: 68 CAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDNN 127 Query: 127 QEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + L+ +L +QL L KN + T E V + KT LFS A+E+ +L AG Sbjct: 128 TRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAG 187 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLD 213 + R Q L+ G +G+ FQ DD+ D Sbjct: 188 CLDEKRLQKLRKLGATVGLIFQWQDDLAD 216 >gi|315271285|gb|ACO46371.2| putative Polyprenyl synthetase [Deinococcus deserti VCD115] Length = 329 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 20/254 (7%) Query: 41 GGKRLRPMLTLATALMLEYRG--------DNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 GGK +R L LA+A + G D LA +E L+HDD+ DDS RR Sbjct: 36 GGKGIRSELLLASA---QAHGVAHDTDAWDQAQWLAAGLELFQNWVLIHDDIQDDSEERR 92 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL-- 150 G+ A ++G ++ VGD L + + V A+E + AEG+ LS Sbjct: 93 GQPALHRLYGVPLAINVGDALHAYMWAAVHRAGVPGAMEEFLTMIHRTAEGQHLDLSWVE 152 Query: 151 SKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E DYL +++ KTA L + +L AGVQ + A + G+ LG AFQ+ D Sbjct: 153 HREWKLREADYLEMVQLKTAHYTVIVPLRLGALAAGVQPA--SAFTNAGLALGSAFQIRD 210 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 DVL+ G+ + GK IG D GK TL V+ + ++ + + + + K Sbjct: 211 DVLNLLGDPLKYGKEIGGDLLEGKRTLIVLRWLAQAPAEQREVFLDQMRRDRAA----KD 266 Query: 270 AFIIMRENRALVDT 283 +I + +R L+D+ Sbjct: 267 PAVIAQIHRWLLDS 280 >gi|388220|emb|CAA48735.1| unnamed protein product [Escherichia coli] Length = 131 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 1/127 (0%) Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ A GT + Sbjct: 4 LQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMI 63 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 ++ I G L+ M +L T RA KA +L+ LPD+ W+++L+ + Sbjct: 64 RTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGL 122 Query: 314 VDFCLQR 320 +QR Sbjct: 123 AHIAVQR 129 >gi|198283751|ref|YP_002220072.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665395|ref|YP_002426382.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248272|gb|ACH83865.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517608|gb|ACK78194.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 306 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 25/245 (10%) Query: 19 ILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +L+ + ++P D ++Y GGKR+RP+L A L + A A+E I Sbjct: 26 VLETLLPPAHLLPARLHDAMRYSTLGGGKRVRPLLVYAAGACLGVPLELLDRPAAALEMI 85 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 H +L+HDD+ +D+ LRRG + T++LVGD L +QAF ++ E A E Sbjct: 86 HAYSLVHDDLPAMDNDDLRRGLPTCHRAYDEATAILVGDGLQAQAFLVLAEPGWGMAAER 145 Query: 133 LSLVACTLAEG------------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +LA+ +L + L E+ +LH KT +L A++++ Sbjct: 146 QVQMLASLAQAAGSRGMVGGQAIDLAAVGHELALPALEQMHLH----KTGMLMRCAIQLA 201 Query: 181 SLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK-NIGEDFRNGKPTLP 237 AG+ Q + AL Y +G+AFQ+ DD+LD G++ + GK G D KP+ Sbjct: 202 LCAAGIDAQEARGAALLRYADRVGLAFQVQDDILDEIGDLQQTGKAQQGADRSRNKPSFI 261 Query: 238 VILAF 242 +L Sbjct: 262 TLLGL 266 >gi|148244594|ref|YP_001219288.1| geranyltranstransferase [Candidatus Vesicomyosocius okutanii HA] gi|146326421|dbj|BAF61564.1| geranyltranstransferase [Candidatus Vesicomyosocius okutanii HA] Length = 284 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 125/237 (52%), Gaps = 14/237 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALR 91 ++Y + GKR RP+LT + A + D +CAIEFIH +L+H +DD +R Sbjct: 28 MRYSTLTNGKRFRPILTYSVANIFSTHLDLVDSSSCAIEFIHAYSLIHDDLPAMDDDDIR 87 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSLVACTLAEGE 144 + ++G ++LVGD L + AF +++ +TK E +++L+ + +AEG+ Sbjct: 88 HNQPTCHKLFGEAQAILVGDGLQTLAFKVLVNDNLIGSDTKI-ELIKSLTHASFEMAEGQ 146 Query: 145 LRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA-LKSYGMNLG 202 LS ++K +++T + +H + KT L + A+ + ++++ N+ Q L + ++G Sbjct: 147 AIDLSIIAKQVNITTLETMH--RKKTGALLNCAVNLGAIVSKNCNNKDQTILNIFSKDIG 204 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 +A+Q+ DDVLD +GK D KPT P +L + K+ ++ I++ Sbjct: 205 LAYQIQDDVLDIETPDELLGKKQYSDEYKNKPTYPSLLGLDKSRLVYKDLYEKAIDE 261 >gi|330886861|gb|EGH20296.1| geranyltranstransferase [Pseudomonas syringae pv. mori str. 301020] Length = 296 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 17/227 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L A L ++ ACA+E IH +L+HDD+ Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACTLAEGELRQ 147 LRRG+ + ++L GD L S AF ++ S++A L +V A Sbjct: 93 LRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQMVNPLAAAAGPAG 152 Query: 148 L----------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKS 196 S+ LD +Y+H + KT L A++ + +L +G + R AL+ Sbjct: 153 YGGAGQAIDLGSVGLKLDQAALEYMH--RHKTGALIEASVRLGALASGQADQPRLDALQI 210 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 211 YARAVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 257 >gi|315613297|ref|ZP_07888206.1| geranyltranstransferase [Streptococcus sanguinis ATCC 49296] gi|315314532|gb|EFU62575.1| geranyltranstransferase [Streptococcus sanguinis ATCC 49296] Length = 291 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 78/287 (27%), Positives = 134/287 (46%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALQVA 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIETKSQEALEA-----LSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + ++ + ++ LSL + +L EGE + LSL E+ Sbjct: 117 PYSLIAQADLPSQIKVNLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L + +F T++ + +E + + Sbjct: 229 KTPQKDLQAEKSTYPALLGLEEAI----SFCNQTLDQAEAKLEEIAQ 271 >gi|291060049|gb|ADD72784.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum str. Chicago] Length = 377 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/245 (31%), Positives = 118/245 (48%), Gaps = 38/245 (15%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATA------LMLEYRG-DNH----------VLLA 68 D ++ V + GGKR RP+L + +A + +R H L+ Sbjct: 53 DTRVLRTVCNACVSCGGKRWRPLLLILSAELAHACVQCTHRKLQGHKRKKISEREWYTLS 112 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E IHTA+LLHDD+ D S+ RRGK A L +G + +L A ++ + Sbjct: 113 AVVELIHTASLLHDDIEDHSSTRRGKPCAYLRYGTDCVLNAASWLYFHAHALIDTLSIEP 172 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDV----------TEEDYLHVIKSKTAVLFSAALE 178 AL+A +L + T++ R L + + LD+ + YL ++ KT L + + E Sbjct: 173 ALKA-ALFSATIS--ATRALHMGQALDIAWHRSPELIPSRAQYLRMVALKTGALIALSGE 229 Query: 179 VSSLIAGVQNSVRQALKSYG---MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L AG S R+A +S+G M +GI FQ++DDV G V+ GK +D GK + Sbjct: 230 LGFLCAGY--SAREA-RSFGAQVMPIGIGFQILDDVQGIDGGVS--GKAHADDIVEGKKS 284 Query: 236 LPVIL 240 PVIL Sbjct: 285 FPVIL 289 >gi|168818966|ref|ZP_02830966.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344074|gb|EDZ30838.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084699|emb|CBY94490.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 299 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 16/248 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + ++++A + Sbjct: 94 LRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E D L I + KT L AA+ + +L AG + + L Y Sbjct: 154 MCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDHYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L G ++ +N + I D Sbjct: 214 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQARNKARDLIED 269 Query: 260 GKISVENL 267 + S+ L Sbjct: 270 ARQSLHQL 277 >gi|224532172|ref|ZP_03672804.1| octaprenyl-diphosphate synthase [Borrelia valaisiana VS116] gi|224511637|gb|EEF82043.1| octaprenyl-diphosphate synthase [Borrelia valaisiana VS116] Length = 347 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 26/223 (11%) Query: 37 LIFSGGKRLRPMLT--LATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRG 93 +I GGKR+RPM+ LA AL L+ + D + L+ +E H+ +L+ DD+ D+S RRG Sbjct: 53 IINRGGKRIRPMIMILLAYALGLKEKNDKLIYKLSLLLELPHSGSLIIDDIEDNSLKRRG 112 Query: 94 KVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 A L++G S+ G+ + L K + L TL+ L L Sbjct: 113 TSAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLS-----NLHLG 167 Query: 152 KNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG--MN 200 + +D+ + ++Y+ +++ KTA LF A S L A + N+ +A K Y + Sbjct: 168 QGIDIKFHNESYIPSIKEYISLVELKTASLFGMA---SFLAAILTNNEDKAKKIYSTFLK 224 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+ FQ++DD+ + + ++N GK G+D GK +LP+I Q Sbjct: 225 LGVYFQIIDDIKNIKNKIN--GKEFGDDLFEGKKSLPIIYFLQ 265 >gi|49086036|gb|AAT51323.1| PA4043 [synthetic construct] Length = 296 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 137/271 (50%), Gaps = 21/271 (7%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 +++ + + ++Y + +GGKR+RP+L A L ACA+E IH +L+HDD+ Sbjct: 27 ELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLP 86 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQE---ALEALSLVA- 137 LRRG+ + T++L D L + AF ++ +T+ QE LE L+ +A Sbjct: 87 AMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLAR 146 Query: 138 ----CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVR 191 + G+ L S+ LD + +H + KT L A++ + +L +G + + Sbjct: 147 AAGSAGMVGGQAIDLGSVGVALDQAALEVMH--RHKTGALIEASVRLGALASGRAEPASL 204 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--RGTKRE 249 AL+ Y +G+AFQ+ DD+LD + +GK G+D + KPT P +L + +G E Sbjct: 205 AALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALE 264 Query: 250 -KNFWKSTINDGKISVENLKK--AFIIMREN 277 ++ + ++ S + L++ +I+ R N Sbjct: 265 LRDLALAALDGFPPSADPLRQLARYIVERRN 295 >gi|168240246|ref|ZP_02665178.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194445849|ref|YP_002039665.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450485|ref|YP_002044458.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|200390075|ref|ZP_03216686.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194404512|gb|ACF64734.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408789|gb|ACF69008.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|199602520|gb|EDZ01066.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205339956|gb|EDZ26720.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 299 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 16/248 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + ++++A + Sbjct: 94 LRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVTDRDRIAMIAELANASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E D L I + KT L AA+ + +L AG + + L Y Sbjct: 154 MCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L G ++ +N + I D Sbjct: 214 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQARNKARDLIED 269 Query: 260 GKISVENL 267 + S+ L Sbjct: 270 ARQSLHQL 277 >gi|208434832|ref|YP_002266498.1| geranyltrans transferase [Helicobacter pylori G27] gi|208432761|gb|ACI27632.1| geranyltrans transferase [Helicobacter pylori G27] Length = 303 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 141/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G++N + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKNEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ G+ FQ++DD++D + E GK D + K + +L ++ + + Sbjct: 215 AFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLKKASDYAQALKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + L+ + +++EN AL++T ++ Sbjct: 273 VLND----LNALEPTYPLLQENLNALLNTLFKG 301 >gi|165921444|ref|ZP_02219632.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334] gi|165916759|gb|EDR35363.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334] Length = 267 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 102/209 (48%), Gaps = 9/209 (4%) Query: 13 EKVNFLILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 E++N L I D+ P + + Y + SGGKR+RP+ T AT E A Sbjct: 9 ERINHK-LGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAA 67 Query: 69 CAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 CAIE +H +L+H +DD RRGK + + T++L GD L AF ++ + Sbjct: 68 CAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDNN 127 Query: 127 QEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + L+ +L +QL L KN + T E V + KT LFS A+E+ +L AG Sbjct: 128 TRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAG 187 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLD 213 + R Q L+ G +G+ FQ DD+ D Sbjct: 188 CLDEKRLQKLRKLGATVGLIFQWQDDLAD 216 >gi|268592056|ref|ZP_06126277.1| geranyltranstransferase [Providencia rettgeri DSM 1131] gi|291312449|gb|EFE52902.1| geranyltranstransferase [Providencia rettgeri DSM 1131] Length = 305 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 16/240 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GGKRLRP LT A M +N A A+E IH +L+HDD+ L Sbjct: 41 AMRYGTLLGGKRLRPFLTYAIGSMFGVSQENLDAPAAAVECIHAYSLIHDDLPAMDDDDL 100 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-------IETKSQEALEALSLVACTLAE- 142 RRG+ + +G +VL GD L + AF ++ + K + A+ A A LA Sbjct: 101 RRGQPTCHIKYGEGNAVLAGDALQTLAFQLLSSAPMPDVTDKDRIAMIAELSYASGLAGM 160 Query: 143 --GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYG 198 G+ L + K +D+ + +H + KT L AA+ + + AG + + L Y Sbjct: 161 CGGQALDLDAEGKQVDLESLERIH--QHKTGALIRAAIRLGAFAAGEKGQQLLPVLDKYA 218 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 ++G+AFQ+ DD+LD G+ GK G D + K T P +L + K+ + + I+ Sbjct: 219 QSIGLAFQVQDDILDVIGDSEVTGKRQGTDAEHEKSTYPSLLGLEAAQKKARELYHDAID 278 >gi|156086492|ref|XP_001610655.1| polyprenyl synthetase superfamily protein [Babesia bovis T2Bo] gi|154797908|gb|EDO07087.1| polyprenyl synthetase superfamily protein [Babesia bovis] Length = 457 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 82/293 (27%), Positives = 132/293 (45%), Gaps = 44/293 (15%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR--- 60 LE L K E++ +L +D I DVVKY++ K RP L L A +L R Sbjct: 110 LERLVNKFQERIQSQVL----TDNTEINDVVKYVLTGQSKLFRPKLGLMVARLLSMRNTH 165 Query: 61 GDNH-------------------------VLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 G+N + L + E +H +L+HDDV+D + LRR Sbjct: 166 GENTTSADEGSTLGYMNYGNLSTELMDKVLRLLQSYEIVHIGSLMHDDVLDSANLRRRMP 225 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A + G + +VLVGD +L++A V SQ +S L +GE+ + + N++ Sbjct: 226 AVHVKAGVKIAVLVGDLMLTRACSTVANLGSQVLTVRMSKALENLIKGEITTVEGTDNVE 285 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ----ALKSY--GMNLGIAFQLVD 209 +YL KTA L ++ A + + +RQ K Y G+++G+AFQ+ D Sbjct: 286 SMMCNYLKKTFLKTASL------IAECCASIASLLRQDEITCHKCYLLGLHVGMAFQIYD 339 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 D+LDY +++GK D +G T+P+++A T+ G + Sbjct: 340 DLLDYECGSSDLGKPTLNDLSSGLITMPLLMALPESPGLGVLVTNGTVQSGNV 392 >gi|111115139|ref|YP_709757.1| octaprenyl-diphosphate synthase [Borrelia afzelii PKo] gi|216263882|ref|ZP_03435876.1| octaprenyl-diphosphate synthase [Borrelia afzelii ACA-1] gi|110890413|gb|ABH01581.1| octaprenyl-diphosphate synthase [Borrelia afzelii PKo] gi|215979926|gb|EEC20748.1| octaprenyl-diphosphate synthase [Borrelia afzelii ACA-1] Length = 347 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 80/294 (27%), Positives = 142/294 (48%), Gaps = 29/294 (9%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDVVDDSALRRG 93 +I GGKR+RPM+ + A L + N+ L L+ +E H+ +L+ DD+ D+S RRG Sbjct: 53 IINRGGKRIRPMIMILLAYALGLKEKNNKLIYKLSLLLELPHSGSLIIDDIEDNSLKRRG 112 Query: 94 KVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 A L++G S+ G+ + L K + L TL+ L L Sbjct: 113 ASAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLS-----NLHLG 167 Query: 152 KNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG--MN 200 + +D+ + ++Y+ +++ KTA LF A S L A + N+ +A K Y + Sbjct: 168 QGIDIKFHNESYIPSIKEYISLVELKTASLFGMA---SFLAAILTNNEDKAKKIYSTFLK 224 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK-STIND 259 LG+ FQ++DD+ + + ++N GK G+D GK +LP+I Q K K + I + Sbjct: 225 LGVYFQIIDDIKNIKNKIN--GKEFGDDLLEGKKSLPIIYFLQEKKDEPKIISKFNQIKN 282 Query: 260 GKISV--ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 K S + + K ++ ++++ ++ A Y + K L P ++ K+L+ Sbjct: 283 AKTSTARKEILKLTKMINSSKSIKNSTIIALKYLNEFKAELNLYPLTNRYKNLL 336 >gi|319941604|ref|ZP_08015928.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B] gi|319804834|gb|EFW01688.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B] Length = 296 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 11/231 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKR+RP+L A + + A A+E IH+ +L+HDD+ +D+ L Sbjct: 29 AMRYSLLGGGKRIRPLLCYAAGAVSGAPEEVLDRAALALEMIHSYSLVHDDMPSMDNDTL 88 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCM-----VIETKSQEALEALSLVACT--LAEG 143 RRG+ + +G ++L GD L ++AF + V +Q ++ L+ A + G Sbjct: 89 RRGRATTHVRYGEAMAMLAGDALQTEAFTVLSSPSVPPEAAQRLVQTLARAAGVWGMCGG 148 Query: 144 ELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI-AGVQNSVRQALKSYGMNL 201 + L + + E + +K+ ++ + + S I + + + L +Y L Sbjct: 149 QALDLEMVGQKPGAAELSRMQAMKTGAMIMAAVLMGAQSGIWTALGDQAKAGLAAYADAL 208 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 G+AFQ+VDD+LD + +GK G+D ++ KPT +L R K Sbjct: 209 GVAFQVVDDILDCTQDTMTLGKTAGKDAKDDKPTWVSLLGLDGAKARAKAL 259 >gi|260101429|ref|ZP_05751666.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM 20075] gi|260084769|gb|EEW68889.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM 20075] gi|328465627|gb|EGF36850.1| Geranyltranstransferase [Lactobacillus helveticus MTCC 5463] Length = 289 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 10/248 (4%) Query: 15 VNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-HVLLACAI 71 ++ + K + S+V + I ++ Y + +GGKRLRP+L LAT L + D + + C I Sbjct: 15 IDDYLAKHLASEVDNQKISQIMAYSVMAGGKRLRPLLFLATLNTLGRKIDEPEIRIVCGI 74 Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEGSQSAQ 134 Query: 130 LEALSLVACT---LAEGELRQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIA 184 L + A + G+ + + N V + +++ ++ KT L A++E++++ A Sbjct: 135 LVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKFINQMEWLKTGCLIQASVEMAAVYA 194 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + + L + G ++Q+ DD++D E GK +D GK +L + Sbjct: 195 KASDIEQVKLIDFAKAFGRSYQIYDDLVDVVETSEEAGKATHKDKEEGKNNTLTLLGIDQ 254 Query: 245 GTKREKNF 252 K+ K Sbjct: 255 SRKKLKEL 262 >gi|62179034|ref|YP_215451.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62126667|gb|AAX64370.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713495|gb|EFZ05066.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 299 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 16/248 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + ++++A + Sbjct: 94 LRRGLPTCHIKFGEANAILAGDALQALAFAIISDAPMPEVADRDRIAMIAELANASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E D L I + KT L AA+ + +L AG + + L Y Sbjct: 154 MCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L G ++ +N + I D Sbjct: 214 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQARNKARDLIED 269 Query: 260 GKISVENL 267 + S+ L Sbjct: 270 ARQSLHQL 277 >gi|307637619|gb|ADN80069.1| Octa prenyl-diphosphate synthase/Dimethyl allyl transferase/Geranyl trans transferase /farnesyl diphosphate synthase/Geranyl geranyl pyrophosphate synthetase [Helicobacter pylori 908] gi|325996213|gb|ADZ51618.1| Octaprenyl-diphosphate synthase/Dimethylallyltransferase/Geranyltranstransferas e/farnesyldiphosphate synthase/Geranylgeranyl pyrophosphate synthetase [Helicobacter pylori 2018] gi|325997807|gb|ADZ50015.1| Geranyltranstransferase [Helicobacter pylori 2017] Length = 303 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 139/273 (50%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 +LRR + T+VL+GD L + +F E S LE+ + LV A G + Sbjct: 101 SLRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESRIIVELVKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+ + + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLIMGLVASGINDEELLKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D K + +L ++ + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLD--GAKNSFVNLLGLEKASGYAHTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK + +++EN AL++T ++ Sbjct: 273 VLNDLNL----LKPPYPLLQENLNALLNTLFKG 301 >gi|16763803|ref|NP_459418.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414422|ref|YP_151497.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161615389|ref|YP_001589354.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551766|ref|ZP_02345519.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992273|ref|ZP_02573371.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232396|ref|ZP_02657454.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237536|ref|ZP_02662594.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168261144|ref|ZP_02683117.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465513|ref|ZP_02699395.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194471326|ref|ZP_03077310.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737792|ref|YP_002113456.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248755|ref|YP_002145405.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264786|ref|ZP_03164860.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363342|ref|YP_002142979.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198246235|ref|YP_002214377.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204927283|ref|ZP_03218485.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|224582261|ref|YP_002636059.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911444|ref|ZP_04655281.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16418928|gb|AAL19377.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128679|gb|AAV78185.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161364753|gb|ABX68521.1| hypothetical protein SPAB_03160 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194457690|gb|EDX46529.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713294|gb|ACF92515.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631861|gb|EDX50381.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094819|emb|CAR60352.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212458|gb|ACH49855.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243041|gb|EDY25661.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289586|gb|EDY28949.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940751|gb|ACH78084.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204323948|gb|EDZ09143.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323424|gb|EDZ11263.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329490|gb|EDZ16254.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333490|gb|EDZ20254.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205349921|gb|EDZ36552.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224466788|gb|ACN44618.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245706|emb|CBG23502.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992135|gb|ACY87020.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157034|emb|CBW16517.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911456|dbj|BAJ35430.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225151|gb|EFX50212.1| Geranyltranstransferase farnesyldiphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322614703|gb|EFY11632.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618809|gb|EFY15697.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623516|gb|EFY20355.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629186|gb|EFY25965.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631906|gb|EFY28660.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637357|gb|EFY34059.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642042|gb|EFY38652.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647861|gb|EFY44336.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652539|gb|EFY48893.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653299|gb|EFY49632.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660552|gb|EFY56788.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664704|gb|EFY60897.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669243|gb|EFY65393.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670788|gb|EFY66921.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678973|gb|EFY75028.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682001|gb|EFY78026.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685170|gb|EFY81167.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323128742|gb|ADX16172.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194482|gb|EFZ79677.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196981|gb|EFZ82123.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203966|gb|EFZ88983.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206949|gb|EFZ91902.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210833|gb|EFZ95705.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214524|gb|EFZ99275.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223081|gb|EGA07424.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227030|gb|EGA11211.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230152|gb|EGA14272.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233890|gb|EGA17979.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238416|gb|EGA22474.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244104|gb|EGA28113.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246264|gb|EGA30247.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251890|gb|EGA35753.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257887|gb|EGA41566.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261100|gb|EGA44692.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264970|gb|EGA48469.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272533|gb|EGA55940.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622125|gb|EGE28470.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332987371|gb|AEF06354.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 299 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 16/248 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + ++++A + Sbjct: 94 LRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E D L I + KT L AA+ + +L AG + + L Y Sbjct: 154 MCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L G ++ +N + I D Sbjct: 214 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQARNKARDLIED 269 Query: 260 GKISVENL 267 + S+ L Sbjct: 270 ARQSLHQL 277 >gi|323466278|gb|ADX69965.1| Geranyltranstransferase [Lactobacillus helveticus H10] Length = 289 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 10/248 (4%) Query: 15 VNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-HVLLACAI 71 ++ + K + S+V + I ++ Y + +GGKRLRP+L LAT L + D + +AC I Sbjct: 15 IDDYLAKHLASEVDNQKISQIMAYSVMAGGKRLRPLLFLATLNTLGRKIDEPEIRIACGI 74 Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E IHT +L+HDD+ +D+ RRGK+ + WG ++L GD LL + E Sbjct: 75 ELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEGSQSAQ 134 Query: 130 LEALSLVACT---LAEGELRQLSLSKNLDVT-EEDYLHVIKS-KTAVLFSAALEVSSLIA 184 L + A + G+ + + N V + +++ ++ KT L A++E++++ A Sbjct: 135 LVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKFINQMEWLKTGCLIQASVEMAAVYA 194 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + + L + G ++Q+ DD++D + GK +D GK +L + Sbjct: 195 KASDIEQVKLIDFAKAFGRSYQIYDDLVDVVETSEKAGKATHKDKEEGKNNTLTLLGIDQ 254 Query: 245 GTKREKNF 252 K K+ Sbjct: 255 SRKELKDL 262 >gi|294789125|ref|ZP_06754364.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453] gi|294482866|gb|EFG30554.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453] Length = 297 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 136/280 (48%), Gaps = 21/280 (7%) Query: 18 LILKRICSDVEMIPDVV----KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 ++L+R + P+ + +Y+ GGKRLRP+L A A + + A A+E Sbjct: 19 ILLERALPSINQAPETLHEAMRYVTLGGGKRLRPLLVWAAAELGDSVQAACEAAAVAVEC 78 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 IH +L+HDD+ +D+ +LRRGK + + T++LVGD L + AF ++ + Sbjct: 79 IHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEPTALLVGDALQTLAFDVLSTATALSPAR 138 Query: 132 ALSLV--------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL- 182 + ++ + +A G+ L+ + +D+++ + KT L AA+ + +L Sbjct: 139 QIRMINVLAKASGSMGMAGGQAIDLA-NVGVDLSQIQLEQMHGWKTGALIRAAVALGALS 197 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + ++ AL +Y LG+AFQ++DDVLD + +GK G+D KPT ++ Sbjct: 198 CPDLDDNALAALDNYATKLGLAFQVIDDVLDCEADTATLGKTAGKDAEANKPTYVKLMGL 257 Query: 243 QRGTKREKNFWKSTINDGKISVENLKK-----AFIIMREN 277 + + I+ ++ E + F+++R+N Sbjct: 258 TAAREYANTLIQQAIDALQLFDERADRLRQLAEFVVIRKN 297 >gi|307293392|ref|ZP_07573238.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1] gi|306881458|gb|EFN12674.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1] Length = 302 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 119/231 (51%), Gaps = 14/231 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + +++ GGKRLRP+L A + + D+ + + A+E IH +L+HDD+ Sbjct: 42 EAMRHAAMGGGKRLRPLLVQAASDLFNISRDSALRVGVAVECIHVYSLVHDDLPAMDDDD 101 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACT--L 140 +RRGK + T++L GD L AF ++ + ++ E ++AL++ + T + Sbjct: 102 MRRGKPTVHKAFDEATAILAGDCLHDLAFEILADEETHPDPFVRVELVKALAVASGTSGM 161 Query: 141 AEGELRQLSLSK-NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A G++ L K + D+ L +K T L + ++ ++++A + R L Y Sbjct: 162 AGGQMMDLEAEKASFDLPTVTRLQQLK--TGALIAFCVDAAAIMARIPPDARPRLHGYAR 219 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++G+AFQ+ DD+LD G+ + GK +G+D GK T +L R ++ + Sbjct: 220 DIGLAFQIADDLLDVEGDADLAGKALGKDAAAGKETFVSLLGTDRARQQAR 270 >gi|206576602|ref|YP_002240111.1| geranyltranstransferase [Klebsiella pneumoniae 342] gi|288936860|ref|YP_003440919.1| polyprenyl synthetase [Klebsiella variicola At-22] gi|290510084|ref|ZP_06549454.1| geranyltranstransferase [Klebsiella sp. 1_1_55] gi|206565660|gb|ACI07436.1| geranyltranstransferase [Klebsiella pneumoniae 342] gi|288891569|gb|ADC59887.1| Polyprenyl synthetase [Klebsiella variicola At-22] gi|289776800|gb|EFD84798.1| geranyltranstransferase [Klebsiella sp. 1_1_55] Length = 299 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/250 (29%), Positives = 116/250 (46%), Gaps = 20/250 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMHYGALLGGKRLRPFLVYATGAMFGVSRTTLDAPAAAVECIHAYSLMHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----------LEALSLVAC 138 LRRG + +G ++L GD L + AF ++ + + L S VA Sbjct: 94 LRRGLPTCHIKFGEANAILAGDALQTLAFSILSDAPMADVSDRDRLAMVSELAQASGVAG 153 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSY 197 L + + +D+ + +H + KT L AA+ + +L AG + + AL Y Sbjct: 154 MCGGQALDLEAEGQQVDLQALERIH--RHKTGALIRAAVRMGALSAGERGRAALPALDRY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 N+G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ + I Sbjct: 212 AENIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKAHDL----I 267 Query: 258 NDGKISVENL 267 D + S++ L Sbjct: 268 ADARRSLDEL 277 >gi|15639670|ref|NP_219120.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum str. Nichols] gi|189025908|ref|YP_001933680.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum SS14] gi|2072008|gb|AAB53642.1| octaprenyl-diphosphate synthase [Treponema pallidum] gi|3322980|gb|AAC65646.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum str. Nichols] gi|189018483|gb|ACD71101.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum SS14] Length = 364 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/245 (31%), Positives = 118/245 (48%), Gaps = 38/245 (15%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATA------LMLEYRG-DNH----------VLLA 68 D ++ V + GGKR RP+L + +A + +R H L+ Sbjct: 40 DTRVLRTVCNACVSCGGKRWRPLLLILSAELAHACVQCTHRKLQGHKRKKISEREWYTLS 99 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E IHTA+LLHDD+ D S+ RRGK A L +G + +L A ++ + Sbjct: 100 AVVELIHTASLLHDDIEDHSSTRRGKPCAYLRYGTDCVLNAASWLYFHAHALIDTLSIEP 159 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDV----------TEEDYLHVIKSKTAVLFSAALE 178 AL+A +L + T++ R L + + LD+ + YL ++ KT L + + E Sbjct: 160 ALKA-ALFSATIS--ATRALHMGQALDIAWHRSPELIPSRAQYLRMVALKTGALIALSGE 216 Query: 179 VSSLIAGVQNSVRQALKSYG---MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + L AG S R+A +S+G M +GI FQ++DDV G V+ GK +D GK + Sbjct: 217 LGFLCAGY--SAREA-RSFGAQVMPIGIGFQILDDVQGIDGGVS--GKAHADDIVEGKKS 271 Query: 236 LPVIL 240 PVIL Sbjct: 272 FPVIL 276 >gi|271966484|ref|YP_003340680.1| octaprenyl-diphosphate synthase [Streptosporangium roseum DSM 43021] gi|270509659|gb|ACZ87937.1| octaprenyl-diphosphate synthase [Streptosporangium roseum DSM 43021] Length = 322 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 14/210 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V+ L GK +RP L A A D V L +E IH A+LLHDDV+D++ RRG Sbjct: 40 VRTLAAGPGKFVRPRLLAAGAGFGTADHDRLVRLGALVELIHLASLLHDDVIDEAETRRG 99 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----ALSLVACTLAEGELRQLS 149 AA G + ++L G A ++ T++ + E A+S+ LA GEL + Sbjct: 100 APAAHTAVGTEQAMLAG-----LACFALVGTEAADLGEGVAGAVSMAVAKLAYGELLDVE 154 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + YL +++SKTA LF + + A + AL +G LG+ FQ++D Sbjct: 155 RAFDTAFPLPAYLELVQSKTAELFRLCCLLGAAEARSGHGEADALVRFGTALGVTFQILD 214 Query: 210 DVLDYRGEVNEMGKNIGEDFR---NGKPTL 236 D LD R N GK +G D G PTL Sbjct: 215 DCLDLR--PNHSGKPVGTDHALGLFGAPTL 242 >gi|302024292|ref|ZP_07249503.1| geranyltranstransferase [Streptococcus suis 05HAS68] gi|330833278|ref|YP_004402103.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3] gi|329307501|gb|AEB81917.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3] Length = 289 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 122/236 (51%), Gaps = 17/236 (7%) Query: 34 VKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 V Y + +GGKR+RP+L T+ + +E + ++ + AC +E IHT +L+HDD+ +D+ Sbjct: 29 VLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC-VELIHTGSLIHDDLPAMDNDD 87 Query: 90 LRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEAL---EALSLVACT--LAE 142 RRG++ V+ T++L GD FL F ++ ++ L LS + T + Sbjct: 88 YRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQVDLPAETILALVRELSQASGTFGMVA 147 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G++ ++ + ++T E + +KT L + + LIAG + V L+ G +G Sbjct: 148 GQVLDMA-GEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQSDVVINHLRQAGQLIG 206 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +AFQ+ DD+LD E+GK +D K T P ++ G + K F + ++N Sbjct: 207 LAFQVRDDILDVTTTFEEIGKTPQKDVLAEKSTYPALM----GLEASKVFLEDSLN 258 >gi|332673768|gb|AEE70585.1| geranyltranstransferase [Helicobacter pylori 83] Length = 303 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 140/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALGIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 +LRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 SLRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMVLGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D K + +L + + + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDKEESGKTTHLD--GVKNSFVNLLGLEEASGYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK A+ +++EN AL++T ++ Sbjct: 273 VLNDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|16759400|ref|NP_455017.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142828|ref|NP_806170.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052895|ref|ZP_03345773.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427858|ref|ZP_03360608.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213586122|ref|ZP_03367948.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213613222|ref|ZP_03371048.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647259|ref|ZP_03377312.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855375|ref|ZP_03383615.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825066|ref|ZP_06544418.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25315864|pir||AG0554 geranyltranstransferase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501691|emb|CAD08879.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi] gi|29138460|gb|AAO70030.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 299 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 16/248 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + ++++A + Sbjct: 94 LRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E D L I + KT L AA+ + +L AG + + L Y Sbjct: 154 MCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L G ++ +N + I D Sbjct: 214 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQARNKARDLIED 269 Query: 260 GKISVENL 267 + S+ L Sbjct: 270 ARQSLHQL 277 >gi|322834065|ref|YP_004214092.1| Polyprenyl synthetase [Rahnella sp. Y9602] gi|321169266|gb|ADW74965.1| Polyprenyl synthetase [Rahnella sp. Y9602] Length = 309 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 21/250 (8%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 +D+ ++ + ++Y GGKRLRP L A+ + N A A+E IH +L+HDD+ Sbjct: 38 ADLPLV-EAMRYGALLGGKRLRPYLVYASGQLFSLDLKNLDAPAAAVECIHAYSLIHDDL 96 Query: 85 VDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-------------SQEA 129 LRRG+ + +G ++L GD L + AF ++ +++ S+ A Sbjct: 97 PAMDDDDLRRGQPTCHIKFGEANAILSGDALQTLAFSILADSEMPDVAVKDRLAMISELA 156 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQN 188 L + S C +L LD E+ + H KT L AA+ + +L AG Sbjct: 157 LASGSSGMCGGQALDLAAEGQQVGLDALEQIHRH----KTGALIRAAVRMGALAAGETGR 212 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +V L +Y +G+AFQ+ DD+LD G+ +GK G D + GK T P +L + Sbjct: 213 AVLPILDNYAQAIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLDGAKAK 272 Query: 249 EKNFWKSTIN 258 + ++ ++ Sbjct: 273 AMDLYQEAVS 282 >gi|319745656|gb|EFV97955.1| trans-hexaprenyltranstransferase [Streptococcus agalactiae ATCC 13813] Length = 226 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 6/222 (2%) Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-TLAEGELRQLSLSKNLDVTEE 159 +G +V GD L + F +++E+ + ++ + + GEL Q+ L N Sbjct: 7 FGKDIAVYTGDLLFTVFFDLILESMADTPFMRINAKSMRKILMGELDQMHLRYNQQQGIH 66 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 YL I KTA LF A + + G + V + G N+G+ FQ++DD+LDY + Sbjct: 67 HYLRAISGKTAELFKLASKEGAYFGGAEKEVVRLAGHIGFNIGMTFQILDDILDYTADKK 126 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK-ISVENLKKAFIIMRENR 278 K + ED G LP++LA + + +K ++ ++ E+++K ++ +R Sbjct: 127 TFNKPVLEDLAQGVYGLPLLLAIEENP----DIFKPILDKKTDMTTEDMEKIAYLVVSHR 182 Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + + A + +KA + LP SS KK L+++ ++ L+R Sbjct: 183 GVDKARHLARKFTEKAISDINKLPQSSPKKQLLQLTNYLLKR 224 >gi|307709372|ref|ZP_07645830.1| putative geranyltranstransferase [Streptococcus mitis SK564] gi|307619955|gb|EFN99073.1| putative geranyltranstransferase [Streptococcus mitis SK564] Length = 291 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALHVA 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IQ-PAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + M+ + SQ + + LS + +L EGE + LSL E+ Sbjct: 117 PYVMIAQADLPSQIKVDLIANLSFASGSLGMVAGQVLDMEGEHQHLSL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + V+ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELAPEVQAKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L + F T++ +E + + Sbjct: 229 KTPQKDLQAEKSTYPALLGLEEAIA----FCNQTLDQANAKLEEIAQ 271 >gi|317180223|dbj|BAJ58009.1| geranyltranstransferase [Helicobacter pylori F32] Length = 303 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 141/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESRIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 +G+ +G+ FQ++DD++D + E GK D + K + +L + + + Sbjct: 215 DFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLEEASGYAQTLKAE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 ++D + LK A+ +++EN AL++T ++ Sbjct: 273 VLDDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|239996638|ref|ZP_04717162.1| geranyltranstransferase [Alteromonas macleodii ATCC 27126] Length = 296 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 117/232 (50%), Gaps = 17/232 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D +++ + +GGKR+RP+L L+ + + ++ AIE +H +L+HDD+ Sbjct: 34 DAMRHALLAGGKRMRPLLVQVVGNTLDVPKKDQMAISMAIECVHAYSLVHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--------ETKSQEALEALSLVA--CT 139 LRRG + + T++L GD L + AF ++ ETK + L L+ A Sbjct: 94 LRRGMPTCHIAFDEATAILAGDALQALAFTVLADAPLSTYAETKRSQLLSVLAKSAGYIG 153 Query: 140 LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA-GVQNSVRQALKSY 197 + G+ L S K + + E LH + KT L A +E+ ++++ G+ + L +Y Sbjct: 154 MCGGQAIDLASTGKTISLEELKQLH--RLKTGALLKACVEMVAIVSEGLLPQTKIDLMAY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++G+AFQ+ DD+LD G ++GK G D GK T P L G K+E Sbjct: 212 AADIGLAFQVQDDILDVEGSSEKLGKPAGSDEALGKNTFPAKLGI-TGAKQE 262 >gi|126348100|emb|CAJ89821.1| putative polyprenyl diphosphate synthase [Streptomyces ambofaciens ATCC 23877] Length = 354 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 94/209 (44%), Gaps = 6/209 (2%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK +R L + A G V A A+E +H +LLHDD++D RR + A Sbjct: 65 GGKGVRQALAVLGAEAAGASGRAGVPAAVAVELVHAFSLLHDDIMDGDPDRRRRPAVWKA 124 Query: 101 WGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL----- 154 +G +VL GD L + A + + + LS L G+ L ++ Sbjct: 125 YGTGPAVLAGDALFALAVETLAVAPAGPRTVRLLSTALNDLVRGQADDLLFAERPWTGPE 184 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 V +Y + + KT L A + +++ G + AL G LG+AFQ+VDDVL Sbjct: 185 RVRPHEYRAMAEHKTGSLLGCAAAMGAVLGGAPRTTVTALDRAGRQLGVAFQVVDDVLGI 244 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+ GK + D R K T PV+ A + Sbjct: 245 WGDPAITGKPVHGDLRERKKTFPVLAALE 273 >gi|306829639|ref|ZP_07462829.1| geranyltranstransferase [Streptococcus mitis ATCC 6249] gi|304428725|gb|EFM31815.1| geranyltranstransferase [Streptococcus mitis ATCC 6249] Length = 291 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 29/253 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSAL-- 90 V Y I +GGKR+RP L L L+ H +A A+E IHT +L+HDD+ Sbjct: 31 VLYSIHAGGKRIRPFLLLEVLESLQVVIQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDY 90 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ---EALEALSLVACTLA---- 141 RRG++ +G ++L GD L + ++ + SQ + + LSL + +L Sbjct: 91 RRGRLTNHKKFGEAMAILAGDALFLDPYALIAQADLPSQIKVDLIANLSLASGSLGMVAG 150 Query: 142 -----EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 EGE + LSL E+ + +KT L + + +++I + ++ LK+ Sbjct: 151 QVLDMEGEHQHLSL--------EELQTIHANKTGKLLAYPFQAAAIITELAPEIQAKLKT 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 G +G+AFQ+ DDVLD E+GK +D + K T P +L + F T Sbjct: 203 VGELIGLAFQVRDDVLDVSASFEEIGKTPQKDLQAEKSTYPALLGLEEAI----TFCNQT 258 Query: 257 INDGKISVENLKK 269 ++ K+ ++ + + Sbjct: 259 LDQAKVKLDEISQ 271 >gi|313200383|ref|YP_004039041.1| polyprenyl synthetase [Methylovorus sp. MP688] gi|312439699|gb|ADQ83805.1| Polyprenyl synthetase [Methylovorus sp. MP688] Length = 295 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/279 (27%), Positives = 132/279 (47%), Gaps = 24/279 (8%) Query: 19 ILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +L I +IP ++Y + GGKR+R +L A + A A+E I Sbjct: 17 VLDDILPAANIIPSRLHGAMRYAVLGGGKRVRALLAHAAGEFCQAPISAVEQSAAAVELI 76 Query: 75 HTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-------TK 125 H +L+HDD+ LRRGK + + + T++LVGD L + AF ++ E + Sbjct: 77 HAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQALAFKVLAEPGLLRDAAR 136 Query: 126 SQEALEALSLVACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + L++ + + +A G+ L+ S LD+T+ + + KT L AA + + Sbjct: 137 QMHMVHILAVASGSRGMAGGQAIDLA-SVGLDLTQTELEQMHIHKTGALIRAAALLGAES 195 Query: 184 AGVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 A ++ R +A+ Y +G+AFQ+VDD+LD + +GK G+D + KPT IL Sbjct: 196 ADTVDADRIKAVDHYAQAIGLAFQVVDDILDSEADTTTLGKTAGKDADSNKPTYVTILGL 255 Query: 243 QRGTKREKNFWKSTI------NDGKISVENLKKAFIIMR 275 +R + + + + D I ++ L K FI R Sbjct: 256 ERAKQLAQELYDEALAPLAAYGDSAIRLQQLAK-FITQR 293 >gi|322375371|ref|ZP_08049884.1| geranyltranstransferase [Streptococcus sp. C300] gi|321279634|gb|EFX56674.1| geranyltranstransferase [Streptococcus sp. C300] Length = 291 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 80/287 (27%), Positives = 134/287 (46%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALQVA 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + ++ + SQ + + LSL + +L EGE + LSL E+ Sbjct: 117 PYALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTANFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L + F T++ +E + + Sbjct: 229 KTPQKDLQAEKSTYPALLGLEEAIA----FCNQTLDQANAKLEEIAQ 271 >gi|254458755|ref|ZP_05072179.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales bacterium GD 1] gi|207084521|gb|EDZ61809.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales bacterium GD 1] Length = 282 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 118/231 (51%), Gaps = 27/231 (11%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYL---IFSGGKRLRPMLTLA-----TALMLEYRGDN 63 M+ +L+ + + + P K L + +GGKR RP L L +LML+ G Sbjct: 1 MQNFETFLLENLPTSKSIHPTYEKALQQMLIAGGKRFRPALLLGVVAAYNSLMLD--GAR 58 Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 H A A+E +HT +L+HDD+ +DDS LRRG+ +++ T++LVGD L + +F V Sbjct: 59 HA--AYAVELLHTYSLIHDDLPAMDDSPLRRGEPTLHVLYDEVTAILVGDALNTYSF-EV 115 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSL---------SKNLDVTEEDYLHVIKSKTAVL 172 + + L+ G L + L +K L+V + LH +KTA L Sbjct: 116 LSNAPFSDYTRVKLIQELAKNGGLNGMVLGQAIDCYFENKPLNVADIKILHT--NKTAKL 173 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 +A+L++ ++I G Q + L ++G+ LG+ FQ+ DD+LD E GK Sbjct: 174 IAASLKMGAIIVG-QEELGDKLYAFGIKLGLLFQIQDDILDVTQSSEEAGK 223 >gi|187918188|ref|YP_001883751.1| dimethylallyltransferase [Borrelia hermsii DAH] gi|119861036|gb|AAX16831.1| dimethylallyltransferase [Borrelia hermsii DAH] Length = 348 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 27/237 (11%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSALRRG 93 +I GGKR+RPML + A L Y N L+ +E H+ +L+ DD+ D + RRG Sbjct: 53 IINRGGKRIRPMLMILLAYALGYNNSNTKNLYKLSMLLELPHSGSLIIDDIEDGAIKRRG 112 Query: 94 KVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 K A L++G S+ + + L K+ + L TL+ L L Sbjct: 113 KPAIHLIYGLDNSINTANLIYFLPAKLIQTANLKTSQQLLIYENFFTTLS-----NLHLG 167 Query: 152 KNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + +D+ E+Y+ +++ KT+ LF A ++ ++ +N + ++ M LG Sbjct: 168 QGIDIAFHNGTYIPNVEEYISLVELKTSSLFGMAGFLAGILTNNENKAKNLYNTF-MKLG 226 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 FQ++DD+ + + +N GK G+D GK +LP+I +EK F + I + Sbjct: 227 TCFQIIDDIKNIKDGIN--GKEFGDDLIEGKKSLPIIYFL-----KEKQFDRQIIQE 276 >gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma] Length = 338 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 12/225 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + SGGKR+RP++ +A ++ + ACA E IH+ +++ DD+ +D+ Sbjct: 75 EAMRYTLLSGGKRVRPIVCIAACELVGGHESTVMPTACAQEMIHSMSVMLDDLPCMDNDD 134 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVAC-----TL 140 RRGK++ V+G + ++L L + A V+ + + AL+ +A Sbjct: 135 FRRGKLSNHRVYGEKITLLAVRSLQALAVDHVVTATRGVPPERLVRALTEMAILTGSKGA 194 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A G++ L S ++ +V+ E H+ KT L ++ ++I G + L+ + Sbjct: 195 AAGQIADLCSSGEDFNVSIEQLEHIHMQKTGTLCEGSVVSGAIIGGASEEEIEKLRKFSK 254 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+ FQ+VDDVLD E+GK G+D K T P ++ ++ Sbjct: 255 CIGLMFQIVDDVLDVTKSSMELGKPAGKDVVAAKATYPRLIGIEK 299 >gi|118399458|ref|XP_001032054.1| Polyprenyl synthetase family protein [Tetrahymena thermophila] gi|89286391|gb|EAR84391.1| Polyprenyl synthetase family protein [Tetrahymena thermophila SB210] Length = 438 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 19/252 (7%) Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG------------DNH 64 F I ++ SD + + + + GK +RP L + +L + G + Sbjct: 113 FNIKIQLKSDHDYVNKISGHYYSKEGKLVRPSLNFLLSQIL-FDGTTQEFFEKKDLVEKQ 171 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 L A IE IH ++L+HDD++D++ RRG A + +G++ +V GD+++ ++ + Sbjct: 172 RLWAAVIENIHVSSLVHDDIIDNAFTRRGLETAHVKFGHREAVFSGDYIIGRSGQQISRF 231 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSK----NLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + L GE+ Q + + +LD Y+ KTA L + + + Sbjct: 232 NDIRMYQIYSHIMENLTHGEINQANSKRTYKYDLDEIINQYILKTYYKTASLMAFSAQGV 291 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +I ++ L + +LGI+FQL DD+LDY + ++GK D + G T PV+ Sbjct: 292 GIILNQDFHNQECLFKFAQHLGISFQLADDMLDYTSDSAQLGKAALADLKEGNVTGPVLF 351 Query: 241 AFQR--GTKREK 250 A + GT+ + Sbjct: 352 ALEEIDGTEEHR 363 >gi|85713667|ref|ZP_01044657.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] gi|85699571|gb|EAQ37438.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] Length = 308 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 12/233 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y GGKRLRP L + ++ + + +L A+E IH +L+HDD+ +D+S Sbjct: 46 DAMRYSSLGGGKRLRPFLVVESSAVFGVAREAALLAGAALECIHCYSLIHDDLPAMDNSD 105 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE------- 142 LRRG+ + T++L GD LL+ AF ++ + + L+ LA Sbjct: 106 LRRGRPTLHKTTDDATAILAGDGLLTLAFDIITRDEVHQDPTVRLLLTRALARAAGIGGM 165 Query: 143 --GELRQLSLSKNL-DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+L L+ D D V + KT L +L+ QAL +YG Sbjct: 166 VGGQLLDLAGEGRFGDRGPVDVARVQQMKTGALLRFGCIAGALLGQASQEDYQALDTYGR 225 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 LG AFQ+ DD+LD G+ +GK G D GK T L KR ++ Sbjct: 226 ALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKKRVRDL 278 >gi|152968946|ref|YP_001334055.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893358|ref|YP_002918092.1| geranyltranstransferase [Klebsiella pneumoniae NTUH-K2044] gi|262042444|ref|ZP_06015604.1| geranyltranstransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150953795|gb|ABR75825.1| geranyltranstransferase (farnesyldiphosphate synthase) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545674|dbj|BAH62025.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040219|gb|EEW41330.1| geranyltranstransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 299 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 20/250 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMHYGALLGGKRLRPFLVYATGEMFGVCRTTLDAPAAAVECIHAYSLMHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVA-----CT 139 LRRG + +G ++L GD L + AF ++ ++ ++ L +S +A Sbjct: 94 LRRGLPTCHIKFGEANAILAGDALQTLAFSILSDAPMVDVPDRDRLAMVSELAQASGVAG 153 Query: 140 LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSY 197 + G+ L + +D+ + +H + KT L AA+ + +L AG + + AL Y Sbjct: 154 MCGGQALDLQAEGQQVDLQALERIH--RHKTGALIRAAVRMGALSAGERGRAALPALDRY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 N+G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ + I Sbjct: 212 AENIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKAHDL----I 267 Query: 258 NDGKISVENL 267 D + S++ L Sbjct: 268 ADARRSLDEL 277 >gi|288220|emb|CAA79955.1| geranylgeranyl pyrophosphate synthetase [Myxococcus xanthus] Length = 361 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 24/292 (8%) Query: 43 KRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRG---- 93 KRLRP L +A + RG V A +E +HT L+HDDV D + LRRG Sbjct: 65 KRLRPALVMAGHCL--ARGSAVVPSGLWRFAAGLELLHTFLLIHDDVADQAELRRGAPPL 122 Query: 94 -KVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACTLAEGELRQLS 149 ++ A G +V+VGD L ++A +++ T ++ V+ A G+ L Sbjct: 123 HRMLAPGRAGEDLAVVVGDHLFARALEVMLGSGLTCVAGVVQYYLGVSGHTAAGQYLDLD 182 Query: 150 LSKN--LDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 L + +VT L V KTA F A L ++++ G + + + L+ G ++G+A+Q Sbjct: 183 LGRAPLAEVTLFQTLRVAHLKTARYGFCAPLVCAAMLGGASSGLVEELERVGRHVGLAYQ 242 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN----FWKSTINDGKI 262 L DD+L G+ N GK DF GK T PV+ AF R T+ E+ W + Sbjct: 243 LRDDLLGLFGDSNVAGKAADGDFLQGKRTFPVLAAFARATEAERTELEALWALPVEQKDA 302 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 + +A + RA E + A+ SL+ LP+ + + L++ + Sbjct: 303 AALARARALVESCGGRA--ACERMVVRASRAARRSLQSLPNPNGVRELLDAL 352 >gi|325846498|ref|ZP_08169413.1| putative geranyltranstransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481256|gb|EGC84297.1| putative geranyltranstransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 279 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 106/192 (55%), Gaps = 17/192 (8%) Query: 40 SGGKRLRPMLTLATALMLEYRGD----NHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 GKR+RP++ L T ML GD N + A ++E +H +L+HDD+ +D+ RRG Sbjct: 43 DSGKRIRPIVFLETCRML--LGDKLDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRG 100 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVA--CT---LAEGELR 146 K +G ++LVGD LLS AF + + + Q L+ +A C + +G++ Sbjct: 101 KFTVHKKFGEDQAILVGDSLLSFAFENILNLSIEDQRFLKPARYLARACGKDGMIKGQIF 160 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + +KN +++ L V K+KT+ LF AAL ++ L + + + L++Y LG+AFQ Sbjct: 161 DIKANKNENLSY--ILDVYKNKTSRLFMAALMMAGLYCQLDDEKLEKLENYAYYLGMAFQ 218 Query: 207 LVDDVLDYRGEV 218 L DD+LD E+ Sbjct: 219 LQDDILDKYDEI 230 >gi|307703537|ref|ZP_07640479.1| geranyltranstransferase [Streptococcus oralis ATCC 35037] gi|307622944|gb|EFO01939.1| geranyltranstransferase [Streptococcus oralis ATCC 35037] Length = 291 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 32/286 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MK E L L + +F ++ S + + V Y I +GGKR+RP L L L+ Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLESLKVV 57 Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQA 117 H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKEFGEAMAILAGDALFLDP 117 Query: 118 FCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLH 163 + ++ + SQ + + LSL + +L EGE + LSL E+ Sbjct: 118 YALIAQADLSSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQA 169 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 + +KT L + + +++IA ++ ++ LK+ G +G+AFQ+ DDVLD E+GK Sbjct: 170 IHANKTGKLLAYPFQAAAIIAELEPEIQAKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 +D + K T P +L + F T++ + +E + + Sbjct: 230 TPQKDLQAEKSTYPALLGLEEAIA----FCNQTLDQAEAKLEEIAQ 271 >gi|309320748|pdb|3P41|A Chain A, Crystal Structure Of Polyprenyl Synthetase From Pseudomonas Fluorescens Pf-5 Complexed With Magnesium And Isoprenyl Pyrophosphate Length = 303 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 16/225 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL- 90 + +Y + +GGKR+RP+L A L + + ACA+E IH +L+HDD+ Sbjct: 41 EAXRYSVXNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAXDDDD 100 Query: 91 -RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL-VACTLAEGELRQL 148 RRG+ + ++L GD L S AF +++ +A + L TLA+ Sbjct: 101 LRRGQPTTHKAFDEAXAILAGDGLQSLAFSALLDPALSDASAEIRLRXVTTLAQAAGPAG 160 Query: 149 ----------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSY 197 S+ LD +Y H + KT L A++ + +L +G + +AL++Y Sbjct: 161 XVGGQAIDLGSVGLKLDQQALEYXH--RHKTGALIEASVILGALASGRAEKGELKALQTY 218 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD + +GK G D KPT P +L Sbjct: 219 AQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGL 263 >gi|323720556|gb|EGB29637.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis CDC1551A] Length = 325 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 20 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 79 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 80 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 138 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E L V+ KT L +A+ ++ + ++G Sbjct: 139 AVVAEAFAELITGQMRATRGPASHIDTIEHCLRVVHEKTGSLIAASGQLGAALSGAAEEQ 198 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + G +G AF++ D++ G+ + G D TLP++ A RE+ Sbjct: 199 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYAL-----REQ 250 Query: 251 NFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 S + + G I +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 251 TPDTSRLRELLAGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 310 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 311 RALATLIDHAV 321 >gi|307543672|ref|YP_003896151.1| polyprenyl synthetase [Halomonas elongata DSM 2581] gi|307215696|emb|CBV40966.1| polyprenyl synthetase [Halomonas elongata DSM 2581] Length = 292 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 117/240 (48%), Gaps = 11/240 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + +++ + GGKRLRP+L AT L + A A+E +H +L+HDD+ Sbjct: 31 EQLDAAMRHGVLVGGKRLRPVLLYATGRALGASDEALDGPAMAVELVHAYSLVHDDLPAM 90 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----L 140 +RRG+ + T++L GD L + AF ++ +T + +A + Sbjct: 91 DDDDVRRGRPTVHRAYDEATAILAGDALQTLAFEVLADTGHPRLAAMVGTLARAAGRDGM 150 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ-ALKSYG 198 A G+ L ++ + D+T +H + KT L AA+ + L+A ++ R AL+ Y Sbjct: 151 AAGQALDLDAVGGHPDLTALATMH--RHKTGALIHAAVRLGGLVAVPEDDERLLALERYA 208 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DDVLD G+ +GK G D KPT P +L + + ++ ++ Sbjct: 209 AAIGLAFQIRDDVLDVTGDTAVLGKTSGADAARDKPTYPTLLGLKGADDKARSLVDEAVS 268 >gi|300113550|ref|YP_003760125.1| polyprenyl synthetase [Nitrosococcus watsonii C-113] gi|299539487|gb|ADJ27804.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113] Length = 339 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 17/229 (7%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GKR+R L E + ++ + A AIE I A+L+HDD +D+ +RR + A + Sbjct: 51 GKRIRGCLVFLMNQTQEGKPEDSLPRAVAIECIQAASLIHDDYLDEDVIRRKRPATWTIE 110 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL------SLSKNLD 155 G + +VL+GD + + A + E ++ +A T+A G ++L S+ Sbjct: 111 GPRRAVLLGDIMFATAIQSMAELSKEDGATVAHAIA-TVANGAYQELFWQTKTGKSRAHK 169 Query: 156 VTEED-YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 + E+D Y H+I KT LF AA ++ ++ AG V ++G G A+Q+ DD+ D+ Sbjct: 170 LLEKDLYEHIIYLKTGALFGAACQLGAIAAGAHQEVSALAYAFGARTGEAYQIADDLEDF 229 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT-----KREKNFWKSTIN 258 + E+ P LP + F R T ++ ++W+ T+ Sbjct: 230 IA----WWRQPQENPEKLSPLLPALSYFCRQTGLTLPQQPASYWQKTLQ 274 >gi|299768927|ref|YP_003730953.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter sp. DR1] gi|298699015|gb|ADI89580.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter sp. DR1] Length = 303 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 116/234 (49%), Gaps = 17/234 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA L A A+E IH +L HDD+ Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLVACTL 140 +D+ LRRG+ + +G T++L GD L S AF + + + Q A+ L + Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153 Query: 141 AEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSVR 191 ++ + LD + +++ ++ ++KT L AA+ + ++ +G ++ Sbjct: 154 LATATSKMVCGQVLDLQAEAKQIAQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIP 213 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + L+ YG +G+AFQ++DD+LD +GK G+D + K T P ++ ++ Sbjct: 214 K-LRQYGQTIGLAFQVLDDILDITSSTEALGKTAGKDEQVQKSTYPALMGLEQA 266 >gi|270263554|ref|ZP_06191823.1| geranyltranstransferase [Serratia odorifera 4Rx13] gi|270042438|gb|EFA15533.1| geranyltranstransferase [Serratia odorifera 4Rx13] Length = 306 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 113/228 (49%), Gaps = 16/228 (7%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGKRLRP L T M +N + A A+E IH +L+HDD+ LRRG+ Sbjct: 50 GGKRLRPFLVYTTGQMFGVSLNNLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCH 109 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVA----CTLAEGELRQLSL-- 150 + +G +++L GD L + AF ++ + + + L++V+ + A G SL Sbjct: 110 IKFGEASAILAGDALQTLAFSILADADMPDVALRDRLAMVSELATASGAAGMCGGQSLDL 169 Query: 151 ---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQ 206 + +D+ + +H + KT L AA+ + +L AG + L Y +G+AFQ Sbjct: 170 EAEGRQIDLPALELIH--RHKTGALIRAAVRLGALAAGEPGRAALPQLDRYAAAIGLAFQ 227 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + DD+LD GE ++GK G D ++GK T P +L + + ++ Sbjct: 228 VQDDILDVVGETEKIGKRQGADQQHGKSTYPALLGLDSAKAKAWDLYQ 275 >gi|293365584|ref|ZP_06612293.1| geranyltranstransferase [Streptococcus oralis ATCC 35037] gi|291315952|gb|EFE56396.1| geranyltranstransferase [Streptococcus oralis ATCC 35037] Length = 291 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 32/286 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MK E L L + +F ++ S + + V Y I +GGKR+RP L L L+ Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLESLKVV 57 Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQA 117 H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKEFGEAMAILAGDALFLDP 117 Query: 118 FCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLH 163 + ++ + SQ + + LSL + +L EGE + LSL E+ Sbjct: 118 YALIAQADLSSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQT 169 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 + +KT L + + +++IA ++ ++ LK+ G +G+AFQ+ DDVLD E+GK Sbjct: 170 IHANKTGKLLAYPFQAAAIIAELEPEIQAKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 +D + K T P +L + F T++ + +E + + Sbjct: 230 TPQKDLQAEKSTYPALLGLEEAIA----FCNQTLDQAEAKLEEIAQ 271 >gi|330006916|ref|ZP_08305788.1| polyprenyl synthetase [Klebsiella sp. MS 92-3] gi|328535670|gb|EGF62119.1| polyprenyl synthetase [Klebsiella sp. MS 92-3] Length = 299 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 20/250 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMHYGALLGGKRLRPFLVYATGEMFGVCRTTLDAPAAAVECIHAYSLMHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVA-----CT 139 LRRG + +G ++L GD L + AF ++ ++ ++ L +S +A Sbjct: 94 LRRGLPTCHIKFGEANAILAGDALQTLAFSILSDAPMVDVPDRDRLAMVSELAQASGVAG 153 Query: 140 LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSY 197 + G+ L + +D+ + +H + KT L AA+ + +L AG + + AL Y Sbjct: 154 MCGGQALDLQAEGQQVDLQALERIH--RHKTGALIRAAVRLGALSAGERGRAALPALDRY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 N+G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ + I Sbjct: 212 AENIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKAHDL----I 267 Query: 258 NDGKISVENL 267 D + S++ L Sbjct: 268 ADARRSLDEL 277 >gi|288965921|pdb|3LOM|A Chain A, Crystal Structure Of Geranyltransferase From Legionella Pneumophila gi|288965922|pdb|3LOM|B Chain B, Crystal Structure Of Geranyltransferase From Legionella Pneumophila Length = 313 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 114/243 (46%), Gaps = 21/243 (8%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHT 76 +L I I + Y +FSGGKR+RP+L +++ D VL +A A+E H Sbjct: 27 LLNEIIIPAPQIRSALHYALFSGGKRIRPILVYLAGDLIDV--DQGVLDIIAAALELTHC 84 Query: 77 ATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETKSQEALEAL 133 +L+HDD+ +D+ LRRGK + + T++LVGD + QA + V+ + L A Sbjct: 85 YSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGM--QALAIEVLLMRLSPLLPAA 142 Query: 134 SLVACT-----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-VSS 181 +VA T + G+ LS VTEE + KT L A E V + Sbjct: 143 QVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLILACFEMVLA 202 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 V ++ AL++YG ++G+ FQ+ DD LD +GK D N K T + Sbjct: 203 AQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSSDQANQKTTFATLFN 262 Query: 242 FQR 244 Q+ Sbjct: 263 KQQ 265 >gi|254419553|ref|ZP_05033277.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3] gi|196185730|gb|EDX80706.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3] Length = 301 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 17/243 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L R + + ++Y GKRLRP L A + + + ACA+E +H + Sbjct: 29 LLPRADGPEARLTEAMRYAALGPGKRLRPFFALEAARLFNIDERSVLRAACALECVHAYS 88 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +RRG+ + T+VL GD L + AF +++ + E ++V Sbjct: 89 LVHDDLPCMDDDDMRRGRPTVHRAYDEATAVLAGDALQTAAFDIILHEDTHED----AVV 144 Query: 137 ACTLAE-----GELRQLSLSKNLDV--TEEDYLHVIKS---KTAVLFSAALEVSSLIAGV 186 C LA R ++ + +D+ +D V + KT LF+ A E+ +IA Sbjct: 145 RCELAARLSMASGARGMAGGQMIDLLGVRDDLGGVARMQRLKTGALFAYAFEIPLIIAEA 204 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI-GEDFRNGKPTLPVILAFQRG 245 + AL S+ ++G+A+Q+VDD+LD G EMGK G+D GK +L + Sbjct: 205 SAQHQHALISFAHDVGLAYQIVDDLLDAEGSAEEMGKAAGGKDAALGKTNFVTLLGLEAA 264 Query: 246 TKR 248 +R Sbjct: 265 RQR 267 >gi|163760432|ref|ZP_02167514.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43] gi|162282383|gb|EDQ32672.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43] Length = 289 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 108/220 (49%), Gaps = 26/220 (11%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV----LLACAIEFIHTATLLHDDV 84 +I D ++Y +F GG R+RP L LA AL GD A AIE +H A+L+HDD+ Sbjct: 26 IICDALRYSVFPGGARIRPRLCLAVALA---EGDEAPSASNAAATAIELLHCASLVHDDL 82 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL-- 140 DD+A RRGK + +G T+VL GD L+ AF ET ++E L +A + Sbjct: 83 PCFDDAATRRGKPSVHTAFGETTAVLAGDALIVLAF----ETIARECLATPDRIAPLIGV 138 Query: 141 ---AEGELRQLSLSKNLDVTEEDYLHVI-KSKTAVLF--SAALEVSSLIAGVQNSVRQAL 194 A G + + + + L V ++KT+ LF S + A QN R Sbjct: 139 IGRAVGMPHGIIAGQAWESEKSIDLKVYHRAKTSSLFIGSTTAGAIAAGADPQNWYR--- 195 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 G LG AFQ+ DD+ D+ E+GK G+D + +P Sbjct: 196 --LGEALGDAFQVADDLRDFASSPEEIGKPCGQDAAHDRP 233 >gi|125624487|ref|YP_001032970.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363] gi|124493295|emb|CAL98263.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363] Length = 301 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 23/222 (10%) Query: 30 IPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 + + KY + +GGKR+RP+L L A LE H +A A+E IHT +L+HDD+ + Sbjct: 41 LAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVT-TAHYQVAAALEMIHTGSLIHDDLPAM 99 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT------ 139 D+ RRGK+ + T++L GD L F ++ S L A ++V+ T Sbjct: 100 DNDDYRRGKLTNHKKFDEATAILAGDTLFFDPFYVL----SSSDLSAQTIVSLTRELAYA 155 Query: 140 -----LAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G++ ++ K+L +T+ + +H + KT L + + ++A N + Sbjct: 156 SGSYGMVAGQILDMAGEGKDLTLTQIEQIH--RLKTGRLLTFPFVAAGIVAQKTNQEIEK 213 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L+ G LG+AFQ+ DD+LD E+GK G+D K T Sbjct: 214 LRVVGQILGLAFQIRDDILDVTATFAELGKTPGKDVLEEKST 255 >gi|319947470|ref|ZP_08021702.1| geranyltranstransferase [Streptococcus australis ATCC 700641] gi|319746410|gb|EFV98671.1| geranyltranstransferase [Streptococcus australis ATCC 700641] Length = 295 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 119/232 (51%), Gaps = 22/232 (9%) Query: 28 EMIPDVVKYLIFS---GGKRLRPMLTLAT-----ALMLEYRGDNHVLLACAIEFIHTATL 79 ++ P +V+ +++S GGKR+RP+L L A +LE H +A A+E IHT +L Sbjct: 22 QIAPRLVESILYSVRAGGKRIRPLLLLELLEAFHAPILE----AHFQVAAALEMIHTGSL 77 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +HDD+ +D+ RRG++ +G ++L GD L AF V E +++ + Sbjct: 78 IHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDSLFLDAFGCVAEADLPASIQVQLIAL 137 Query: 138 CTLAEGELRQLSLSKNLDVTEE------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSV 190 + A G ++ + LD+ E D L VI + KT L + + + ++ ++ +V Sbjct: 138 LSDASGTAGMVA-GQVLDMEGEGASLTLDQLQVIHANKTGRLLAYPFQAAGILLELEPAV 196 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 L+ G++LG+AFQ+ DD+LD + +GK +D K T P +L Sbjct: 197 ATLLEEIGIHLGLAFQIRDDILDVTADFASLGKTPQKDLHAEKSTYPALLGL 248 >gi|15232010|ref|NP_189747.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75263903|sp|Q9LHR4|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12, chloroplastic; Short=GGPP synthase 12; Short=GGPS12; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12; AltName: Full=Dimethylallyltranstransferase 12; AltName: Full=Farnesyl diphosphate synthase 12; AltName: Full=Farnesyltranstransferase 12; AltName: Full=Geranyltranstransferase 12; Flags: Precursor gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana] gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana] Length = 360 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 81/236 (34%), Positives = 126/236 (53%), Gaps = 20/236 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV- 84 D I + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT++L+HDD+ Sbjct: 89 DPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLP 148 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAE 142 +DD+ LRRGK V+G +VL GD LL+ AF M + + A E + LA+ Sbjct: 149 CMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLVAPERMIRSVTELAK 208 Query: 143 ---------GELRQLSLSKNL---DVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 G++ L S+ L DV E +++H+ KTA L AA + ++I G Sbjct: 209 AIGTKGLVAGQVSDLC-SQGLNPYDVGLERLEFIHL--HKTAALLEAAAVLGAIIGGGTE 265 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Q L+ YG +G+ FQ+VDD++D E+GK G+D K T P ++ +R Sbjct: 266 EEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLTYPRLIGLER 321 >gi|224825912|ref|ZP_03699016.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] gi|224602136|gb|EEG08315.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] Length = 298 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 129/254 (50%), Gaps = 27/254 (10%) Query: 20 LKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L R+ + E P + ++Y GGKR+RP+L A ++ ++ + A+E IH Sbjct: 21 LARLLPNPESAPQRLHEAMRYSTLDGGKRVRPLLVHAAGELVSANPEHLARIGAAVEMIH 80 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEA 129 +L+HDD+ +DD LRRGK + + + T++LVGD L + AF ++ + Sbjct: 81 AYSLVHDDMPCMDDDVLRRGKPTCHVAFDDATALLVGDALQTLAFDVLATPLDGVAAAAQ 140 Query: 130 LEALSLVA-----CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 LE + +A +A G+ L S+ + L + E +Y+H +K T L AA+ + +L Sbjct: 141 LEMVRTLARASGHGGMAGGQAIDLASVGQTLSLPELEYMHCLK--TGALIRAAVLLGAL- 197 Query: 184 AGVQNSVRQA--LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT------ 235 AG S + L + +G+AFQ+VDDVLD + +GK G+D N KPT Sbjct: 198 AGTPLSAEETERLDHFAKRIGLAFQVVDDVLDVDADTATLGKTAGKDAANDKPTYVSLMG 257 Query: 236 LPVILAFQRGTKRE 249 LP AF R + E Sbjct: 258 LPEARAFARELRDE 271 >gi|222153401|ref|YP_002562578.1| geranyltranstransferase [Streptococcus uberis 0140J] gi|222114214|emb|CAR42776.1| putative geranyltranstransferase [Streptococcus uberis 0140J] Length = 289 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 13/226 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV-- 84 E + + V Y I +GGKR+RP+L L L+ ++H A A+E IHT +L+HDD+ Sbjct: 23 EKLNEAVLYSINAGGKRIRPILFLEVIEALQIPLTESHFKAAAALEMIHTGSLIHDDLPA 82 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLVACT 139 +D+ RRG++ + T++L GD L AF M+ ET + + + +LS + T Sbjct: 83 MDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAFGMLAETDFPTDVTVDLVRSLSSASGT 142 Query: 140 --LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + G++ ++ K L++ +H + KT L + ++ +A + ++ Sbjct: 143 FGMVGGQMLDMAAEGKKLNLKNLQLIH--RHKTGQLLAYPFWAAARVAQLDENLLATFLE 200 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 GM +G+AFQ+ DD+LD E+GK +D K T P +L Sbjct: 201 IGMIIGLAFQVRDDILDITANFEEIGKTPKKDVMAEKMTYPHLLGL 246 >gi|311086191|gb|ADP66273.1| geranyltranstransferase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311087854|gb|ADP67933.1| geranyltranstransferase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 301 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 132/254 (51%), Gaps = 28/254 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 +KY +FSG KRLR L +T + + +++ AIEFIH+ +L+HDD+ +D+ R Sbjct: 36 MKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDNDNFR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELR 146 RGK++ + +G TS+L GD L S AF ++ + + + ++ +S ++ ++ Sbjct: 96 RGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGSS--- 152 Query: 147 QLSLSKNLDVTEE------DYLHVIK-SKTAVLFSAALEVSSLIA-GVQNSVRQALKSYG 198 + + +NLD+ E L +I KT+ L +A+ + + S+ L + Sbjct: 153 GMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLMRSAVRLVYFSSNNFSKSILSILDLFS 212 Query: 199 MNLGIAFQLVDDVLDYRGE-VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +++G+AFQ+ DD+LD++ + V K I + K T P+I+ K+ K K + Sbjct: 213 ISIGLAFQIQDDILDFKKDSVKTDNKKIIK-----KHTYPLIIGLDESRKKIKQLHKKSF 267 Query: 258 NDGKISVENLKKAF 271 +++ +LKK F Sbjct: 268 ----LALNSLKKKF 277 >gi|213417843|ref|ZP_03350948.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 268 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 16/248 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 3 EAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDD 62 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + ++++A + Sbjct: 63 LRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANASGIAG 122 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E D L I + KT L AA+ + +L AG + + L Y Sbjct: 123 MCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAE 182 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L G ++ +N + I D Sbjct: 183 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQARNKARDLIED 238 Query: 260 GKISVENL 267 + S+ L Sbjct: 239 ARQSLHQL 246 >gi|288563197|pdb|3LJI|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 gi|290560563|pdb|3LSN|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed With Magnesium Length = 304 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 16/225 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL- 90 + +Y + +GGKR+RP+L A L + + ACA+E IH +L+HDD+ Sbjct: 34 EAXRYSVXNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAXDDDD 93 Query: 91 -RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL-VACTLAEGELRQL 148 RRG+ + ++L GD L S AF +++ +A + L TLA+ Sbjct: 94 LRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRXVTTLAQAAGPAG 153 Query: 149 ----------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSY 197 S+ LD +Y H + KT L A++ + +L +G + +AL++Y Sbjct: 154 XVGGQAIDLGSVGLKLDQQALEYXH--RHKTGALIEASVILGALASGRAEKGELKALQTY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD + +GK G D KPT P +L Sbjct: 212 AQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGL 256 >gi|116511680|ref|YP_808896.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris SK11] gi|116107334|gb|ABJ72474.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris SK11] Length = 301 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 23/222 (10%) Query: 30 IPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 + + KY + +GGKR+RP+L L A LE H +A A+E IHT +L+HDD+ + Sbjct: 41 LAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVT-TAHYQVAAALEMIHTGSLIHDDLPAM 99 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT------ 139 D+ RRGK+ + T++L GD L F ++ S L A ++V+ T Sbjct: 100 DNDDYRRGKLTNHKKFDEATAILAGDTLFFDPFYVL----SSSDLSAQTIVSLTRELAYA 155 Query: 140 -----LAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G++ ++ K+L +T+ + +H + KT L + + ++A N + Sbjct: 156 SGSYGMVAGQILDMAGEGKDLTLTQIEQIH--RLKTGRLLTFPFVAAGIVAQKTNQEIEK 213 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L+ G LG+AFQ+ DD+LD E+GK G+D K T Sbjct: 214 LRVVGQILGLAFQIRDDILDVTATFAELGKTPGKDVLEEKST 255 >gi|15840414|ref|NP_335451.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|13880584|gb|AAK45265.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] Length = 333 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 13/311 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 28 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 87 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + EA Sbjct: 88 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATA-SQLASRLDPEAF 146 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 ++ L G++R + T E L V+ KT L +A+ ++ + ++G Sbjct: 147 AVVAEAFAELITGQMRATRGPASHIDTIEHCLRVVHEKTGSLIAASGQLGAALSGAAEEQ 206 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + + G +G AF++ D++ G+ + G D TLP++ A RE+ Sbjct: 207 IRRVARLGRMIGAAFEISRDIIAISGDSATLS---GADLGQAVHTLPMLYAL-----REQ 258 Query: 251 NFWKSTIND---GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 S + + G I +++ +A ++R + + + +Y +A++ L LPD + Sbjct: 259 TPDTSRLRELLAGPIHDDHVAEALTLLRCSPGIGKAKNVVAAYAAQAREELPYLPDRQPR 318 Query: 308 KSLMEVVDFCL 318 ++L ++D + Sbjct: 319 RALATLIDHAV 329 >gi|50085991|ref|YP_047501.1| geranyltranstransferase [Acinetobacter sp. ADP1] gi|49531967|emb|CAG69679.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter sp. ADP1] Length = 302 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 122/249 (48%), Gaps = 24/249 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI---EFIHTATLLHDDV 84 E + V + + GGKR+RP L A A M + N+ A E IH +L HDD+ Sbjct: 34 EPLKSAVYHTVMLGGKRVRPALCYAVASM--EKNPNYAAARRAAVAVELIHCYSLAHDDL 91 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---SQEALEA------- 132 +D+ LRRG+ + +G T++L GD L S AF V+ ++ Q +++A Sbjct: 92 PCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAF-EVLGSRLFDQQNSVDASIVLRQM 150 Query: 133 --LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQN 188 L+ + + G++ L ++ ++ +E ++ ++KT L AAL + +L +G+ Sbjct: 151 QILATASSKMVCGQVLDLQ-AEGKEIDQEQLENIHRNKTGALIQAALMMGAVTLFSGMDQ 209 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 ++ L+ +G +G+AFQ+ DD+LD +GK G+D + K T P ++ Sbjct: 210 AIPH-LRQFGQRIGLAFQVQDDILDIISSTETLGKTAGKDQQVQKSTYPALMGLDAAQNY 268 Query: 249 EKNFWKSTI 257 KN + Sbjct: 269 AKNLHDQAL 277 >gi|205351734|ref|YP_002225535.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855904|ref|YP_002242555.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205271515|emb|CAR36333.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707707|emb|CAR31991.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326626769|gb|EGE33112.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 299 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 16/248 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + ++++A + Sbjct: 94 LRRGLPTCHIKFGEANAILAGDALQTLAFAILSDAPMPEVTDRDRIAMIAELANASGIAG 153 Query: 148 LSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E D L I + KT L AA+ + +L AG + + L Y Sbjct: 154 MCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L G ++ +N + I D Sbjct: 214 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQARNKARDLIED 269 Query: 260 GKISVENL 267 + S+ L Sbjct: 270 ARQSLHQL 277 >gi|330994690|ref|ZP_08318613.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1] gi|329758331|gb|EGG74852.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1] Length = 311 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 114/258 (44%), Gaps = 26/258 (10%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L R+ + D ++Y GGKRLR L A + + +A ++E +H + Sbjct: 38 LLPRVEGGEARLIDAMRYATLGGGKRLRGYLVAEVASLFNVAAEGADRVAASVEMLHAYS 97 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----- 131 L+HDD+ LRRG+ + + T++L GD L + AF ++ + E Sbjct: 98 LVHDDLPAMDDDDLRRGQPSTHRKFDEATAILAGDALQTMAFDILANPLTHAGAEVRINL 157 Query: 132 ---------ALSLVACTL--AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 A +V + EGE R LSL E LH +K+ + +SA E Sbjct: 158 VRALADASGAAGMVGGQMIDMEGEGRALSLE------EVARLHALKTGCLIRYSA--EAG 209 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ R + +YG +LG AFQ+ DDVLD E+GK G+D GK T +L Sbjct: 210 AILGQAGEDARLRISAYGRDLGAAFQIADDVLDATASAEELGKTAGKDEAAGKSTYVALL 269 Query: 241 AFQRGTKREKNFWKSTIN 258 + K + + ++ Sbjct: 270 GVEGAAKEARRVAEQALS 287 >gi|296116237|ref|ZP_06834855.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295977343|gb|EFG84103.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 295 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 26/230 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D ++Y GGKRLR L A M + A ++E +H +L+HDD+ Sbjct: 35 DAMRYATLGGGKRLRGYLVAEVASMFKVEEAGAYRAAASVEMLHAYSLVHDDLPAMDDDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE----------ALEALSLVACT 139 LRRG+ + + T++L GD L + AF ++ + + L A S A Sbjct: 95 LRRGQPSTHRKFDEATAILAGDALQTMAFGILADPATHRDAGVRIDLVTTLAAASGAAGM 154 Query: 140 LA------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + EGE R LSL E LH +K+ + +SA E +++ +R+ Sbjct: 155 VGGQMIDMEGEGRSLSLE------EVARLHALKTGCLIRYSA--EAGAILGQAAPDLRER 206 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + +YG +LG AFQ+ DDVLD E+GK G+D GK T +L + Sbjct: 207 IAAYGRDLGAAFQVADDVLDATASAEELGKTAGKDEAAGKSTYVALLGVE 256 >gi|145511654|ref|XP_001441749.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409010|emb|CAK74352.1| unnamed protein product [Paramecium tetraurelia] Length = 346 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 15/264 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 + I D + LI GGKR RP A + + + +A +E IH ATL+ DD+ DD Sbjct: 43 QSISDPIYDLIDRGGKRWRPAFCFLIADLFKRAHEELYEVAALVELIHNATLVVDDIEDD 102 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S++RR + +G +V ++L + + + + + ++ +L+ ++ Sbjct: 103 SSVRRNDKCVHIKYGLDVAVNAANYLYFAPLHYFLNSANYSNDQKMKMLEVSLSNMKIVH 162 Query: 148 LSLSKNL-------DV--TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + ++ D+ TEE YL + KT L A ++S ++ + +AL + Sbjct: 163 FGQAWDIFWHKQVCDIIPTEEQYLKMASYKTGALARMAAQLSCIVLEKDEKIGKALAEFA 222 Query: 199 MNLGIAFQLVDDVLDYRG--EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 + +GIAFQ+ DD+L+ G + + +GED GK +L VI + ++ R KS Sbjct: 223 VQIGIAFQIQDDILNLNGGDKYKQTKGYLGEDIHEGKFSLIVIHSLKQQKGRLLEILKSR 282 Query: 257 INDGKISVENLKKAFIIMRENRAL 280 D E + +A I+++ +L Sbjct: 283 TQDQ----ETINEAISIIKQTGSL 302 >gi|52842540|ref|YP_096339.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629651|gb|AAU28392.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 309 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 114/243 (46%), Gaps = 21/243 (8%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHT 76 +L I I + Y +FSGGKR+RP+L +++ D VL +A A+E H Sbjct: 31 LLNEIIIPAPQIRSALHYALFSGGKRIRPILVYLAGDLIDV--DQGVLDIIAAALELTHC 88 Query: 77 ATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETKSQEALEAL 133 +L+HDD+ +D+ LRRGK + + T++LVGD + QA + V+ + L A Sbjct: 89 YSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGM--QALAIEVLLMRLSPLLPAA 146 Query: 134 SLVACT-----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-VSS 181 +VA T + G+ LS VTEE + KT L A E V + Sbjct: 147 QVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLILACFEMVLA 206 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 V ++ AL++YG ++G+ FQ+ DD LD +GK D N K T + Sbjct: 207 AQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSSDQANQKTTFATLFN 266 Query: 242 FQR 244 Q+ Sbjct: 267 KQQ 269 >gi|153208848|ref|ZP_01947072.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212218667|ref|YP_002305454.1| dimethylallyltransferase [Coxiella burnetii CbuK_Q154] gi|120575699|gb|EAX32323.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012929|gb|ACJ20309.1| dimethylallyltransferase [Coxiella burnetii CbuK_Q154] Length = 267 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 102/209 (48%), Gaps = 9/209 (4%) Query: 13 EKVNFLILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 E++N L I D+ P + + Y + SGGKR+RP+ T AT E A Sbjct: 9 ERINHK-LGSILPDIRQTPQRLHEAMTYAVRSGGKRIRPLFTYATGFSFEVDPAQIDNAA 67 Query: 69 CAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 CAIE +H +L+H +DD RRGK + + T++L GD L AF ++ + Sbjct: 68 CAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDNN 127 Query: 127 QEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + L+ +L +QL L KN + T E V + KT LFS A+E+ +L AG Sbjct: 128 TRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAG 187 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLD 213 + R Q L+ G +G+ FQ DD+ D Sbjct: 188 CLDEKRLQKLRKLGATVGLIFQWQDDLAD 216 >gi|109947621|ref|YP_664849.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba] gi|109714842|emb|CAJ99850.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba] Length = 303 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 139/270 (51%), Gaps = 28/270 (10%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGKKDYLNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 ALRR + ++VL+GD L + +F ++ S E+ + LV A G ++ + Sbjct: 101 ALRRNHPTLHAKYNETSAVLIGDALNTYSF-ELLSNASLESHIIVELVKILSANGGIKGM 159 Query: 149 SLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYG 198 L + LD E+ +LH + KTA L SA+L + + +G ++ + + L+ +G Sbjct: 160 ILGQALDCYFENTPLNLEQLTFLH--EHKTAKLVSASLIMGLVASGNKDEELSKWLQDFG 217 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + +G+ FQ++DD++D + E GK D + K + +L ++ + + +N Sbjct: 218 LKIGLCFQVLDDIIDVTQDEKESGKTTHLD--SAKNSFVNLLGLEKASDYAQTLKTEILN 275 Query: 259 DGKISVENLKKAFIIMREN-RALVDTEYRA 287 D + LK I+++EN L++T ++ Sbjct: 276 D----LNALKPTHILLKENLNILLNTLFKG 301 >gi|288940506|ref|YP_003442746.1| polyprenyl synthetase [Allochromatium vinosum DSM 180] gi|288895878|gb|ADC61714.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180] Length = 297 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 24/261 (9%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIH 75 IL + + + ++Y + +GGKR+RP+L A E G + LL ACA+E IH Sbjct: 24 ILPPVSVQPSRLHEAMRYTVLAGGKRIRPLLAYAAG---EALGLDAALLDHPACAVEMIH 80 Query: 76 TATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +L+HDD+ LRRG+ + T++L GD L + AF + E A + Sbjct: 81 AYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAGDALQTLAFQALAEAPGLSAESRV 140 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLI- 183 ++V+ R + + +D+ E + +H+ KT L ++++ L Sbjct: 141 AMVSALARASGARGMVGGQAMDLEAEGTPLDLVQLENIHI--HKTGALIRVSVQMGVLAH 198 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+ + L Y LG+AFQ+ DDVLD G+ ++GK G D K T P ++ Sbjct: 199 GGLDADKAERLDHYAKCLGLAFQIQDDVLDVEGDTAQIGKTAGRDQELNKATYPALV--- 255 Query: 244 RGTKREKNFWKSTINDGKISV 264 G K IN+ SV Sbjct: 256 -GLAEAKAMANQLINEAIESV 275 >gi|300071276|gb|ADJ60676.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris NZ9000] Length = 285 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 23/222 (10%) Query: 30 IPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 + + KY + +GGKR+RP+L L A LE H +A A+E IHT +L+HDD+ + Sbjct: 25 LAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVT-TAHYQVAAALEMIHTGSLIHDDLPAM 83 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT------ 139 D+ RRGK+ + T++L GD L F ++ S L A ++V+ T Sbjct: 84 DNDDYRRGKLTNHKKFDEATAILAGDTLFFDPFYVL----SSSDLSAQTIVSLTRELAYA 139 Query: 140 -----LAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G++ ++ K+L +T+ + +H + KT L + + ++A N + Sbjct: 140 SGSYGMVAGQILDMAGEGKDLTLTQIEQIH--RLKTGRLLTFPFVAAGIVAQKTNQEIEK 197 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L+ G LG+AFQ+ DD+LD E+GK G+D K T Sbjct: 198 LRVVGQILGLAFQIRDDILDVTATFAELGKTPGKDVLEEKST 239 >gi|302024379|ref|ZP_07249590.1| polyprenyl synthetase [Streptococcus suis 05HAS68] Length = 235 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 111/224 (49%), Gaps = 11/224 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLA 68 + +E+V +IL + + + + + GK LR L L A M E + + + A Sbjct: 14 RGLEEVKSIILSEMMVLHPAVTSKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKLYFA 73 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E +H ATL+HDDV+D + RRG AA + N+ ++ GD+LL A+ + K Sbjct: 74 AHLEVLHLATLIHDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLL--AYSSRLFGKGLR 131 Query: 129 ALEA----LSL----VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 LE L L + T+ GEL QL + ++T + YL I+ KTA LF A ++ Sbjct: 132 LLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQLG 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 S + G G LG+AFQL DD++DY+ +V E K Sbjct: 192 SFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAESRKT 235 >gi|29829548|ref|NP_824182.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] gi|29606656|dbj|BAC70717.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] Length = 394 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 105/203 (51%), Gaps = 5/203 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L LA L + V A A+E IH TLLHDDV+D RR + A V+ Sbjct: 110 GKAIRPALVLAAVRALGGPQSSAVRAAAAVELIHNFTLLHDDVMDRDTTRRHRPTAWTVF 169 Query: 102 GNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACT--LAEGELRQLSLSKNL--DV 156 G+ ++L GD L + A ++ E A A L AC L G+ ++ + +V Sbjct: 170 GDADAILAGDALQALAHRLLAEDPHPASAAAAARLAACVIELCAGQHADTAMERRGPGEV 229 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T ++ L + ++KT L A + +L AG + +AL ++G G+AFQL+DDV+ G Sbjct: 230 TLDECLAMAEAKTGALLGCACALGALYAGAEEEDVEALDAFGREAGLAFQLIDDVIGIWG 289 Query: 217 EVNEMGKNIGEDFRNGKPTLPVI 239 + + GK G D K +LPV+ Sbjct: 290 DPSRTGKPAGADLMARKKSLPVV 312 >gi|13475328|ref|NP_106892.1| geranyltranstransferase [Mesorhizobium loti MAFF303099] gi|14026080|dbj|BAB52678.1| geranyltranstransferase [Mesorhizobium loti MAFF303099] Length = 321 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 16/225 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y GGKR R +L LAT + + + AIE +H TL+HDD+ +DD L Sbjct: 54 AMRYATLHGGKRTRALLCLATGALADTPAPMLDDVGAAIEMMHACTLVHDDLPAMDDDVL 113 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALE-----ALSLVACTLAEG 143 RRG + +G T++LVGD L + AF + ++ S + A ++ A A G Sbjct: 114 RRGLPTVHVKFGEATAILVGDALQAHAFLTLASLDAPSDNRIALVRELAQAVSAEGAAGG 173 Query: 144 ELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ----ALKSYG 198 + LSL K++++ +H +KS L A++ + +L A +++ AL Y Sbjct: 174 QAMDLSLVGKHVELDRIVAMHRMKS--GALVRASVRMGALCAIAEDAAHAALYCALDRYS 231 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+A Q+VDD+LD + +GK G+D KPT I+ Q Sbjct: 232 ACFGLALQVVDDILDATADTATLGKTPGKDAAAQKPTCASIMGLQ 276 >gi|83945403|ref|ZP_00957751.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633] gi|83851237|gb|EAP89094.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633] Length = 296 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 15/229 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA- 89 ++Y GKRLRP L + ++ D LL ACA+E +H +L+HDD+ Sbjct: 36 AMRYAALGPGKRLRPFLLIEAGFLVG--ADERALLRAACAVECVHAYSLVHDDLPCMDDD 93 Query: 90 -LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEA---LSLVACTLAEG 143 LRRG+ + T+VL GD L SQAF ++ ET S A+ A L L + G Sbjct: 94 DLRRGRPTVHKEYDEATAVLAGDALQSQAFELLADPETHSNPAVRAELVLRLSKASGPRG 153 Query: 144 ELRQLSLSKNLDVTEEDYLHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + ++ E + +I + KT L S E +IA + R AL+ + Sbjct: 154 MVGGQMIDMAVEAGELSDIGIITRCQRMKTGALISFCAEAGGVIANADRAQRIALEGFAH 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +LG+ +Q+VDD+LD G+ + GK G+D GK IL + R Sbjct: 214 DLGLCYQIVDDLLDAEGDESLTGKRTGKDAGQGKANFVSILGVKDARDR 262 >gi|242373821|ref|ZP_04819395.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1] gi|242348375|gb|EES39977.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1] Length = 288 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 118/217 (54%), Gaps = 13/217 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRG 93 Y + +GGKR+RP+L L T ML+ D V A A+E IHT +L+HDD+ RRG Sbjct: 31 YSLQAGGKRIRPVLLLLTLNMLKGDYDKGVQSALALEMIHTYSLIHDDLPAMDDDDYRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEAL-EALSLVACTLA--EGE- 144 K+ V+G ++L GD LL++AF +V IE K + L + LS + L G+ Sbjct: 91 KLTNHKVYGEWKAILAGDALLTKAFELVSNDELIEDKVKVKLVQRLSKASGHLGMVGGQT 150 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L S +K +D+T + +H K+KT L + A+ + IA V L+ + +LG+ Sbjct: 151 LDMQSENKTVDLTTLEAIH--KAKTGALLTFAVMAAVDIAQVDQETSDHLEKFSQHLGLM 208 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQ+ DD+LD G+ ++GK +G D N K T +L Sbjct: 209 FQIKDDLLDVYGDEEKLGKAVGSDETNHKSTYVSLLG 245 >gi|308183081|ref|YP_003927208.1| geranyltranstransferase [Helicobacter pylori PeCan4] gi|308065266|gb|ADO07158.1| geranyltranstransferase [Helicobacter pylori PeCan4] Length = 303 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 140/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + LV A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELVKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMVLGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEGLFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 +G+ +G+ FQ++DD++D + E GK D K + +L + + + Sbjct: 215 DFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--GVKNSFVNLLGLEEASGYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 ++D + LK A+ +++EN AL++T ++ Sbjct: 273 VLDDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|326794293|ref|YP_004312113.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1] gi|326545057|gb|ADZ90277.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1] Length = 301 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 23/248 (9%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 + + + ++Y +F+GGKR+RPML ATA + A AIE IH +L+HDD+ Sbjct: 28 ADYLHEAMRYSLFNGGKRVRPMLVYATAELFSESNRLTDASAAAIESIHAYSLIHDDLPA 87 Query: 87 DSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 LRRGK + + T++L GD L Q F + + S ++ +L C + Sbjct: 88 MDDDDLRRGKPTCHIQFDEATAILTGDAL--QTFAFELLSASYNEIDTDNLADCKTRQLR 145 Query: 145 L-RQLSLS--------------KNLD--VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L R LS + N+D +T E + + KT L A++ + + G++ Sbjct: 146 LIRSLSRASGRFGMVTGQMIDLNNVDRSITLETLEKMHQHKTGALIRASVLMGAQSVGIE 205 Query: 188 NS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + L Y +G+AFQ+ DD++D + +GKN D KPT P +L + G Sbjct: 206 DQKILSQLDKYASAIGLAFQVQDDIIDITSDTQTLGKNQFSDSEANKPTYPKLLGLE-GA 264 Query: 247 KREKNFWK 254 + + N K Sbjct: 265 REKANTLK 272 >gi|241889564|ref|ZP_04776862.1| geranyltranstransferase [Gemella haemolysans ATCC 10379] gi|241863186|gb|EER67570.1| geranyltranstransferase [Gemella haemolysans ATCC 10379] Length = 286 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 21/210 (10%) Query: 30 IPDVVK----YLIFSGGKRLRPM--LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 +PD++K Y + + GK++RP+ L L +EY + +A AIE +HT +L+HDD Sbjct: 28 MPDILKESITYSLVNDGKKIRPLSFLYLLKFYGIEYS--KYFDIALAIELVHTYSLVHDD 85 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-------ALS 134 + +D+ R GK V+G +VL GD +L+ AF ++ + + L+ A Sbjct: 86 LPEMDNDDYRWGKYTNHKVYGQDVAVLTGDAMLTLAFEVLSDADVKPDLKVRLIKQFANY 145 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQA 193 A + G++ + KN DV + DYL + S KT L L+ + L+A Sbjct: 146 SGAMGMIAGQIYDVK-QKNYDV-DADYLRKMHSLKTGRLIELPLDFACLVANKLEDYDD- 202 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 +K +G LGIA+Q+ DD+LDY G+ ++GK Sbjct: 203 VKEFGQQLGIAYQIKDDILDYYGDFEKIGK 232 >gi|237832673|ref|XP_002365634.1| hexaprenyl pyrophosphate synthetase protein, putative [Toxoplasma gondii ME49] gi|211963298|gb|EEA98493.1| hexaprenyl pyrophosphate synthetase protein, putative [Toxoplasma gondii ME49] Length = 536 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 19/189 (10%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTA+L+HDDV+D + RRG+ A + N+T++L GDFLLS+ +V S E + Sbjct: 243 ELIHTASLMHDDVIDGADTRRGQPATHRRFCNKTAILGGDFLLSRGNGIVAMCGSTEVMM 302 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEED-------------------YLHVIKSKTAVL 172 +S V +L +GEL Q D+ E YL KTA L Sbjct: 303 RMSSVIESLVKGELIQALSDSRGDLGERQAESTEPLREHLKRKSALRTYLTKTYHKTASL 362 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + + +++ G+ + +G +G+AFQL DD LD+ +GK D R+G Sbjct: 363 IAESCACLAILMGLPSRWVTWSADFGACVGMAFQLYDDELDFTASSENLGKPALNDLRSG 422 Query: 233 KPTLPVILA 241 T P+++A Sbjct: 423 LVTAPLLMA 431 >gi|73540584|ref|YP_295104.1| farnesyl-diphosphate synthase [Ralstonia eutropha JMP134] gi|72117997|gb|AAZ60260.1| farnesyl-diphosphate synthase [Ralstonia eutropha JMP134] Length = 294 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 13/229 (5%) Query: 20 LKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L + + + +P + ++Y + GGKR+RP+L A + + ACA+E IH Sbjct: 19 LDQTLPNADTVPHTLHEAMRYAVLGGGKRVRPLLVHAAGEVTGASAEACDAAACAVEMIH 78 Query: 76 TATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +L+HDD+ LRRG+ + T++LVGD L +QAF ++ + +S +A L Sbjct: 79 AYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQTQAFIVLAQAQSVQAEARL 138 Query: 134 SLVA-CTLAEGEL-----RQLSLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGV 186 LVA +A G + + + L D L + + KT L A++ + +L + Sbjct: 139 KLVAELAVASGSVGMAGGQAIDLQNVGKAMSRDALEAMHRMKTGALLRASVRMGALCGEI 198 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 AL Y +G+AFQ+VDD+LD + +GK G+D + KPT Sbjct: 199 DAQGLSALDRYAAAVGLAFQVVDDILDVTADTATLGKTAGKDAAHDKPT 247 >gi|20803894|emb|CAD31472.1| PROBABLE FARNESYL-DIPHOSPHATE SYNTHASE PROTEIN [Mesorhizobium loti R7A] Length = 324 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 20/227 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y GGKR R +L LAT + + + AIE +H TL+HDD+ +DD L Sbjct: 57 AMRYATLHGGKRTRALLCLATGALADTPAPMLDDVGAAIEMMHACTLVHDDLPAMDDDVL 116 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---------QEALEALSLVACTLA 141 RRG + +G T++LVGD L + AF + + +E +A+S A A Sbjct: 117 RRGLPTVHVKFGEATAILVGDALQAHAFLTLASLDAPGDNRIALVRELAQAVS--AEGAA 174 Query: 142 EGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ----ALKS 196 G+ LSL K++++ +H +KS L A++ + +L A +++ AL Sbjct: 175 GGQAMDLSLVGKHVELDRIVAMHRMKS--GALVRASVRMGALCAIAEDAAHAALYCALDR 232 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 Y G+A Q+VDD+LD + +GK G+D KPT I+ Q Sbjct: 233 YSACFGLALQVVDDILDATADTATLGKTPGKDAAAQKPTCASIMGLQ 279 >gi|108759001|ref|YP_629155.1| putative farnesyltranstransferase [Myxococcus xanthus DK 1622] gi|108462881|gb|ABF88066.1| putative farnesyltranstransferase [Myxococcus xanthus DK 1622] Length = 361 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 38/299 (12%) Query: 43 KRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRG---- 93 KRLRP L +A + RG V A +E +HT L+HDDV D + LRRG Sbjct: 65 KRLRPALVMAGHCL--ARGSAVVPSGLWRFAAGLELLHTFLLIHDDVADQAELRRGAAPL 122 Query: 94 -KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL----------AE 142 ++ A G +V+VGD L ++A +++ + L+ VA + A Sbjct: 123 HRMLAPGRAGEDLAVVVGDHLFARALEVMLGS-------GLTCVAGVVQYYLGVCRHTAA 175 Query: 143 GELRQLSLSKN--LDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ L L + +VT L V KTA F A L +++ G + + + L+ G Sbjct: 176 GQYLDLDLGRAPLAEVTLFQTLRVAHLKTARYGFCAPLVCGAMLGGASSGLVEELERVGR 235 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN----FWKS 255 ++G+A+QL DD+L G+ N GK DF GK T PV+ AF R T+ E+ W Sbjct: 236 HVGLAYQLRDDLLGLFGDSNVAGKAADGDFLQGKRTFPVLAAFARATEAERTELEALWAL 295 Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 + + +A + RA E + A+ SL+ LP+ + + L++ + Sbjct: 296 PVEQKDAAALARARALVESCGGRA--ACERMVVRASRAARRSLQSLPNPNGVRELLDAL 352 >gi|323144187|ref|ZP_08078822.1| geranyltranstransferase [Succinatimonas hippei YIT 12066] gi|322416028|gb|EFY06727.1| geranyltranstransferase [Succinatimonas hippei YIT 12066] Length = 294 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 70/243 (28%), Positives = 112/243 (46%), Gaps = 13/243 (5%) Query: 14 KVNFLILKRICS---DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 +VN + R+ + D + + + Y + GGKR RP+L AT L + A A Sbjct: 13 RVNSFMQARLDAFDADAPALKEAMSYGLILGGKRSRPLLVYATGKALGASDASLDYAAAA 72 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +E IH +L+HDD+ +D+ LRRG +G T++L GD L + F + S Sbjct: 73 VECIHAYSLIHDDMPEMDNDELRRGHPTVHKKFGQATALLAGDALQTLGFEFASDKNSGL 132 Query: 129 ALEALSLVACTLAEGE-LRQLSLSKNLDVTEE------DYLHVIKSK-TAVLFSAALEVS 180 + E + LA+G + + +D+ E + L V+ SK T L A+ + Sbjct: 133 SGELRGELCAVLAKGAGFSGMCGGQAMDLDAEGKHIPLERLRVLHSKKTGALIRVAVAMG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ A + L Y G+AFQ+ DDVLD G+ +GK G D K T P ++ Sbjct: 193 AVCADADEKTKAVLDEYAALTGLAFQVWDDVLDVIGDTAVIGKPAGSDEGLDKSTYPALM 252 Query: 241 AFQ 243 + Sbjct: 253 GLE 255 >gi|297562051|ref|YP_003681025.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846499|gb|ADH68519.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 360 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 91/322 (28%), Positives = 143/322 (44%), Gaps = 44/322 (13%) Query: 28 EMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRG------DNHVLLACA-IEFIHTAT 78 E+ P D ++ +I SGGKRLRP T +RG D V+ A A +EF+ Sbjct: 40 ELAPAMDALEAMI-SGGKRLRP-----TFCYWGWRGAGGAAEDERVVRAAASLEFLQACA 93 Query: 79 LLHDDVVDDSALRRG---------KVAARLVW-------GNQTSVLVGDFLLS------- 115 L+HDDV+D+S RRG K+ A W G ++L+GD L+ Sbjct: 94 LVHDDVIDNSDTRRGLPATHKRLAKLHADQGWSGDSEGFGQGAAILIGDLCLAWSDEMYQ 153 Query: 116 -QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLF 173 F + + + +A+ +A L L + T E L V++ K+A Sbjct: 154 ASGFPTEVLGRGRPPFDAMRTE--VMAGQYLDTLEQVRGTG-TREAALRVMRYKSAKYTV 210 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 L + + +AG + YG+ LGIAFQL DDVL G+ + GK G+D R GK Sbjct: 211 ERPLHLGAALAGRHGELAGVYTDYGIPLGIAFQLRDDVLGVFGDPSTTGKPAGDDLREGK 270 Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293 TL V R + ++S + +SV +++ ++ + AL E Y + Sbjct: 271 RTLVVAETLARAGAADAERFRSLLGAPDLSVASVEWMCSLIEGSGALAACEEMIAEYADR 330 Query: 294 AKDSLRCLP-DSSWKKSLMEVV 314 A +L D+S ++ L ++V Sbjct: 331 AVAALESPELDASAREPLRQLV 352 >gi|52550292|gb|AAU84141.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon GZfos37B2] Length = 361 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 85/327 (25%), Positives = 141/327 (43%), Gaps = 35/327 (10%) Query: 28 EMIPDVVKYLIFSG--GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 E+I D V YL G GK LRP + L + + + A A E HT TL+HDDV+ Sbjct: 34 EVIHDSV-YLYLDGRRGKSLRPAVLLFSCGAAGGDEEIAIPAAAATEVFHTWTLVHDDVI 92 Query: 86 DDSALRRGKVAAR-----------------LVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 D +RRG +G ++L GD + ++ E + Sbjct: 93 DRDCMRRGGYTVHEEFRRRGVDLGYDGDKAAHYGTSLAILAGDVQQGWSVSLLSELAERG 152 Query: 129 ALEALSL---------VACTLAEGELRQLSLSKNL--DVTEEDYLHVIKSKTAVLFSAAL 177 A+ L V L G++ + SK ++E L ++ KT L+ A Sbjct: 153 VDPAVVLHLIRMMETDVVIMLLSGQIFDVQYSKAPIESLSEAKILGMLWRKTGALYEFAG 212 Query: 178 EVSSLIA----GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 ++I +N + +++ + G AFQL DD+L G+ ++GK +G D R GK Sbjct: 213 AAGAMIGLSTTNRENELVRSISQFTGRCGTAFQLQDDILGVVGDTKKLGKTVGSDIREGK 272 Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293 TL V AF + +K + + S E + + I+ E ++ T A SY ++ Sbjct: 273 RTLIVYHAFTHADEAQKRCMSRILGNKNASDEEISEVVDILSELGSIEYTRALADSYIEE 332 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320 AK+ + +P S +K L+ ++ + R Sbjct: 333 AKEQIETIPGSRYKDLLLAWAEYMVSR 359 >gi|327398343|ref|YP_004339212.1| Farnesyltranstransferase [Hippea maritima DSM 10411] gi|327180972|gb|AEA33153.1| Farnesyltranstransferase [Hippea maritima DSM 10411] Length = 291 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 78/277 (28%), Positives = 133/277 (48%), Gaps = 28/277 (10%) Query: 25 SDVEMIPDVVKYLIF----SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 + ++ P + + +F SGGKR+R ML + A M + +A AIE +H +L+ Sbjct: 20 AQIKRFPPIFQEALFYTPKSGGKRIRAMLVMCAADMFGADETKSLHIASAIELMHAYSLI 79 Query: 81 HDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 HDD V+D+ RRGK A V+G ++LVGD L + F ++ + +A + +V Sbjct: 80 HDDLPVMDNDDFRRGKPANHKVYGEDLALLVGDGLNTYTFNVIADAPIDDA-RKVKIVKW 138 Query: 139 TLAEGELRQLSLSKNLDVTEE-------------DYLHVIKSKTAVLFSAALEVSSLIAG 185 + + + + +DV +++H K KTA L A++ V I G Sbjct: 139 LSNNAGIGGMVVGQVVDVLSSRDRLKGHSHKKLVNFIH--KHKTAKLIQASV-VCGAICG 195 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + V+ L YG+ G+AFQ++DD LD G+ ++GK ++ N T P + +R Sbjct: 196 NPDDVQLDRLAKYGLYAGVAFQIIDDYLDVVGDEEKLGKKKVDEINN-TLTYPKVYGLKR 254 Query: 245 G---TKREKNFWKSTINDGKISVENLKKAFIIMRENR 278 ++ K+ I D K S E + A +I+ +R Sbjct: 255 SYDIAQKLKDMAILQIKDIKGSKELIDIAKLIVERDR 291 >gi|221508609|gb|EEE34178.1| polyprenyl synthetase domain-containing protein, putative [Toxoplasma gondii VEG] Length = 536 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 19/189 (10%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTA+L+HDDV+D + RRG+ A + N+T++L GDFLLS+ +V S E + Sbjct: 243 ELIHTASLMHDDVIDGADTRRGQPATHRRFCNKTAILGGDFLLSRGNGIVAMCGSTEVMM 302 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEED-------------------YLHVIKSKTAVL 172 +S V +L +GEL Q D+ E YL KTA L Sbjct: 303 RMSSVIESLVKGELIQALSDSRGDLGERQAESREPLREHLKRKSALRTYLTKTYHKTASL 362 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + + +++ G+ + +G +G+AFQL DD LD+ +GK D R+G Sbjct: 363 IAESCACLAILMGLPSRWVTWSADFGACVGMAFQLYDDELDFTASSENLGKPALNDLRSG 422 Query: 233 KPTLPVILA 241 T P+++A Sbjct: 423 LVTAPLLMA 431 >gi|221488090|gb|EEE26304.1| polyprenyl synthetase domain-containing protein, putative [Toxoplasma gondii GT1] Length = 536 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 19/189 (10%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTA+L+HDDV+D + RRG+ A + N+T++L GDFLLS+ +V S E + Sbjct: 243 ELIHTASLMHDDVIDGADTRRGQPATHRRFCNKTAILGGDFLLSRGNGIVAMCGSTEVMM 302 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEED-------------------YLHVIKSKTAVL 172 +S V +L +GEL Q D+ E YL KTA L Sbjct: 303 RMSSVIESLVKGELIQALSDSRGDLGERQAESREPLREHLKRKSALRTYLTKTYHKTASL 362 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + + +++ G+ + +G +G+AFQL DD LD+ +GK D R+G Sbjct: 363 IAESCACLAILMGLPSRWVTWSADFGACVGMAFQLYDDELDFTASSENLGKPALNDLRSG 422 Query: 233 KPTLPVILA 241 T P+++A Sbjct: 423 LVTAPLLMA 431 >gi|225552210|ref|ZP_03773150.1| octaprenyl-diphosphate synthase [Borrelia sp. SV1] gi|225371208|gb|EEH00638.1| octaprenyl-diphosphate synthase [Borrelia sp. SV1] Length = 347 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GGKR+RPM+ + A L + N L L+ +E H+ +L+ DD+ D+S RRG+ A Sbjct: 57 GGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIEDNSLKRRGESAI 116 Query: 98 RLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 L++G S+ G+ + L K + L TL+ L L + +D Sbjct: 117 HLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLS-----NLHLGQGID 171 Query: 156 V---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG--MNLGIA 204 + + ++Y+ +++ KTA LF A S L A + N+ +A K Y + LG+ Sbjct: 172 IKFHNESYIPSIKEYISLVELKTASLFGMA---SFLAAILTNNEDKAKKIYSTFLKLGVY 228 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 FQ++DD+ + + ++N GK G+D GK +LP+I Q Sbjct: 229 FQIIDDIKNIKNKIN--GKEFGDDLLEGKKSLPIIYFLQ 265 >gi|184159332|ref|YP_001847671.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii ACICU] gi|332874228|ref|ZP_08442150.1| polyprenyl synthetase [Acinetobacter baumannii 6014059] gi|183210926|gb|ACC58324.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii ACICU] gi|322509243|gb|ADX04697.1| Geranyltranstransferase [Acinetobacter baumannii 1656-2] gi|323519272|gb|ADX93653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii TCDC-AB0715] gi|332737587|gb|EGJ68492.1| polyprenyl synthetase [Acinetobacter baumannii 6014059] Length = 303 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 132/272 (48%), Gaps = 24/272 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA + + A A+E IH +L HDD+ Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ--------EALEA 132 +D+ LRRG+ + +G T++L GD L S AF + + + Q + ++ Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSV 190 L+ + + G++ L ++ +++++ ++ ++KT L AA+ + ++ +G ++ Sbjct: 154 LATASSKMVCGQVLDLQ-AEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAI 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ YG +G+AFQ+ DD+LD +GK G+D + K T P ++ ++ K Sbjct: 213 PK-LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAK 271 Query: 251 NFWKSTINDGKISVENLKK-----AFIIMREN 277 + EN K+ F++ R N Sbjct: 272 ELHDQAFDALAHFGENAKELVEISQFLLARTN 303 >gi|75274213|sp|Q9LUD9|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3, chloroplastic; Short=GGPP synthase 3; Short=GGPS3; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3; AltName: Full=Dimethylallyltranstransferase 3; AltName: Full=Farnesyl diphosphate synthase 3; AltName: Full=Farnesyltranstransferase 3; AltName: Full=Geranyltranstransferase 3; Flags: Precursor gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 360 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 121/229 (52%), Gaps = 14/229 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT++L+HDD+ +D+ Sbjct: 93 VQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDN 152 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALE---------ALSLVA 137 + LRRGK V+G +VL GD LL+ AF M + + A E A ++ Sbjct: 153 ADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGT 212 Query: 138 CTLAEGELRQLSLSK-NLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L+ + N D ++L I KTA L AA + ++ G + L+ Sbjct: 213 TGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLR 272 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y +G+ FQ+VDD+LD E+GK G+D GK T P ++ +R Sbjct: 273 KYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLER 321 >gi|308184713|ref|YP_003928846.1| geranyltranstransferase [Helicobacter pylori SJM180] gi|308060633|gb|ADO02529.1| geranyltranstransferase [Helicobacter pylori SJM180] Length = 303 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 141/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 +LRR + T+VL+GD L + +F E S LE+ + L+ G + Sbjct: 101 SLRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESHIIVELIKILSVNGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLIMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D K + +L ++ + + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--GTKNSFVNLLGLEKASGYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK A+ +++EN AL++T ++ Sbjct: 273 VLNDLNL----LKTAYPLLQENLNALLNTLFKG 301 >gi|91793921|ref|YP_563572.1| polyprenyl synthetase [Shewanella denitrificans OS217] gi|91715923|gb|ABE55849.1| farnesyl-diphosphate synthase [Shewanella denitrificans OS217] Length = 293 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 14/223 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D + Y GGKR+RP L A ML+ + A AIE IH +L+HDD+ Sbjct: 33 DAMTYGALMGGKRIRPFLVYAIGQMLKVPLEKLDNAAAAIECIHAYSLIHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACT-----L 140 LRRGK + + ++L GD L S AF ++ E T + L + ++A + Sbjct: 93 LRRGKPTVHIAFNEAQAILAGDALQSLAFELMTESQADTSPTQQLHMVKVLAKAAGYQGM 152 Query: 141 AEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ L+ + K +D+ + LH KT L S A+E++ ++A R L + Sbjct: 153 CGGQAIDLAATNKAIDLAQLTQLH--NKKTGALISCAVELAIILADASPVERAHLAQFSH 210 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 LG+AFQ+ DD+LD E+GK G D + K T P +L Sbjct: 211 ALGLAFQVQDDILDVTVSTQELGKPQGSDEQANKSTFPKLLGL 253 >gi|224534236|ref|ZP_03674814.1| octaprenyl-diphosphate synthase [Borrelia spielmanii A14S] gi|224514338|gb|EEF84654.1| octaprenyl-diphosphate synthase [Borrelia spielmanii A14S] Length = 347 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 26/223 (11%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDVVDDSALRRG 93 +I GGKR+RPM+ + A L + N L L+ +E H+ +L+ DD+ D+S RRG Sbjct: 53 IISRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIEDNSLKRRG 112 Query: 94 KVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 A L++G S+ G+ + L K + L TL+ L L Sbjct: 113 ASAIHLIYGIDNSINTGNLIYFLPAKLIERSNLKENQKLMIYENFFTTLS-----NLHLG 167 Query: 152 KNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG--MN 200 + +D+ + ++Y+ +++ KTA LF A S L A + N+ +A K Y + Sbjct: 168 QGIDIKFHNESYIPSIKEYISLVELKTASLFGMA---SFLAAILTNNEDKAKKIYSTFLK 224 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+ FQ++DD+ + + ++N GK G+D GK +LP+I Q Sbjct: 225 LGVYFQIIDDIKNIKNKIN--GKEFGDDLLEGKKSLPIIYFLQ 265 >gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis thaliana] Length = 360 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 121/229 (52%), Gaps = 14/229 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT++L+HDD+ +D+ Sbjct: 93 VQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDN 152 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALE---------ALSLVA 137 + LRRGK V+G +VL GD LL+ AF M + + A E A ++ Sbjct: 153 ADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRAVVELARTIGT 212 Query: 138 CTLAEGELRQLSLSK-NLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L+ + N D ++L I KTA L AA + ++ G + L+ Sbjct: 213 TGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLR 272 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y +G+ FQ+VDD+LD E+GK G+D GK T P ++ +R Sbjct: 273 KYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLER 321 >gi|212696081|ref|ZP_03304209.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM 7454] gi|212676710|gb|EEB36317.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM 7454] Length = 279 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 17/192 (8%) Query: 40 SGGKRLRPMLTLATALMLEYRGD----NHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 GKR+RP++ L T ML GD N + A ++E +H +L+HDD+ +D+ RRG Sbjct: 43 DSGKRIRPIVFLETCRML--LGDKLDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRG 100 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVA--CT---LAEGELR 146 K +G ++LVGD LLS AF + + + Q L+ +A C + +G++ Sbjct: 101 KFTVHKKFGEDQAILVGDSLLSFAFENILNLSIEDQRFLKPARYLARACGKDGMIKGQIF 160 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + +KN +++ L V K+KT+ LF AAL ++ L + + L++Y LG+AFQ Sbjct: 161 DIKANKNENLSY--ILDVYKNKTSRLFMAALMMAGLYCQLDDEKLTKLENYAYYLGMAFQ 218 Query: 207 LVDDVLDYRGEV 218 L DD+LD E+ Sbjct: 219 LQDDILDKYDEI 230 >gi|322392008|ref|ZP_08065471.1| geranyltranstransferase [Streptococcus peroris ATCC 700780] gi|321145106|gb|EFX40504.1| geranyltranstransferase [Streptococcus peroris ATCC 700780] Length = 291 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M E LTL + F K++ S + + V Y + +GGKR+RP L L L+ Sbjct: 1 MNKQEKLTLVESAIEKFYGDKQVSSSLR---EAVLYSVHAGGKRIRPYLLLEVLESLQVP 57 Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQA 117 H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 ITIAHAQVAAALEMIHTGSLIHDDLPAMDDDDFRRGRLTNHKKFGEALAILAGDALFFDP 117 Query: 118 FCMVIETKSQEALEALSLVACTLA---------------EGELRQLSLSKNLDVTEEDYL 162 + ++ + ++ + L+A EGE K+L++ E + Sbjct: 118 YALIAQADLPNEIK-IDLIASLSLSSGSMGMVAGQVLDMEGE------GKHLNLEELQTI 170 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 H +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 171 HA--NKTGKLLAYPFQAAAIIAELTPELQAKLKTVGELVGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L G K F T++ I +E + + Sbjct: 229 KTPQKDLKAEKSTYPALL----GLDEAKEFCNQTLDQANIKLEEIAQ 271 >gi|89255952|ref|YP_513314.1| geranyltranstransferase [Francisella tularensis subsp. holarctica LVS] gi|115314435|ref|YP_763158.1| geranyltranstransferase [Francisella tularensis subsp. holarctica OSU18] gi|167009142|ref|ZP_02274073.1| geranyltranstransferase [Francisella tularensis subsp. holarctica FSC200] gi|169656540|ref|YP_001428011.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367309|ref|ZP_04983335.1| geranyltranstransferase [Francisella tularensis subsp. holarctica 257] gi|254368783|ref|ZP_04984796.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp. holarctica FSC022] gi|290954603|ref|ZP_06559224.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica URFT1] gi|295311946|ref|ZP_06802770.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica URFT1] gi|89143783|emb|CAJ78986.1| Geranyltranstransferase [Francisella tularensis subsp. holarctica LVS] gi|115129334|gb|ABI82521.1| geranyltranstransferase [Francisella tularensis subsp. holarctica OSU18] gi|134253125|gb|EBA52219.1| geranyltranstransferase [Francisella tularensis subsp. holarctica 257] gi|157121704|gb|EDO65874.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp. holarctica FSC022] gi|164551608|gb|ABU61055.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 293 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 + Y FSGGKR+R A L N +A A+E IHT +L+HDD+ +D+ LR Sbjct: 32 MHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKIAFAVESIHTYSLIHDDLPAMDNDTLR 91 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCM--------VIETKSQEALEALSLVACTLAEG 143 RGK + + T++L GD L + AF + + + K L A A + G Sbjct: 92 RGKPTCHIKFNEATAILAGDALQALAFEILQDINYSDIDKLKKINKLFAQYCGASGMVGG 151 Query: 144 ELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGM 199 + QL + +K L + E LH+ +KTA +F A + + +++ QNS + L Sbjct: 152 Q--QLDIEGENKKLKIEELQILHI--NKTAKMFRACIVLPYILSQNQNSQIEDLLVRLSD 207 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +G+ FQ+ DD+LD NE+GK +D K T ++ + K Sbjct: 208 LIGLCFQIKDDILDVTKTTNELGKTSAKDIDANKSTYVSLMGLKDANK 255 >gi|317177716|dbj|BAJ55505.1| geranyltranstransferase [Helicobacter pylori F16] Length = 303 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 141/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMVLGQVLDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D + K + +L + + + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLEEASGYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 ++D + LK A+ ++EN AL++T ++ Sbjct: 273 VLDDLNL----LKPAYPSLQENLNALLNTLFKG 301 >gi|320100357|ref|YP_004175949.1| polyprenyl synthetase [Desulfurococcus mucosus DSM 2162] gi|319752709|gb|ADV64467.1| Polyprenyl synthetase [Desulfurococcus mucosus DSM 2162] Length = 367 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 86/280 (30%), Positives = 136/280 (48%), Gaps = 42/280 (15%) Query: 41 GGKRLRPMLTLATALMLEY-RGDNHVL--LACAIEFIHTATLLHDDVVDDSALRRG---- 93 GGKRLR LTL E+ GD ++ L IE + + L+HDDV+D +RRG Sbjct: 54 GGKRLRAFLTLVGYWSKEWGSGDPSLITSLMTGIELLQSYLLVHDDVMDRDEIRRGGPTV 113 Query: 94 ------------KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVACT 139 K +G+ ++ VGDFL + A +E S+ + E LS + T Sbjct: 114 HSWFRDKCIREFKTGDCTHYGDSQAITVGDFLEATA----VEYVSRAGINGEVLSKLLGT 169 Query: 140 LAEGELRQLSLSKNLDV----------TEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQN 188 A G LR+++ + LDV +E D L V + KTA L + ++ +G N Sbjct: 170 YAAG-LRKVAYGQYLDVLFSYRSLHEVSERDVLLVHRLKTASYTIELPLHMGAIASGKYN 228 Query: 189 S-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + L SY + GIAFQL DD++ G+ + GK +G D + K TL V+ A++ G++ Sbjct: 229 ERLLGELSSYAIPAGIAFQLRDDIIGLYGDPRQTGKPVGSDVKERKKTLLVVKAYELGSE 288 Query: 248 REKNFWKSTINDGK---ISVENLKKAFIIMRENRALVDTE 284 K S I D ++++++K ++RE +L +E Sbjct: 289 EVKRRL-SEIYDAPGTDVTLDHVKYVQDVVRETGSLEYSE 327 >gi|72536066|gb|AAZ73133.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium DC404] Length = 301 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 119/217 (54%), Gaps = 20/217 (9%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDDSALRRG 93 + + GKR+RP+L + A L D+ LL ACA+E +H ++L+ DD+ +D++ALRRG Sbjct: 47 VLAPGKRIRPLLLILAARDLGCDRDHPGLLDMACAVEMVHASSLILDDIPCMDNAALRRG 106 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSLVACT--LAEGE 144 + +G ++L LLS AF +++ E +SQ A+ LS+ T L +G+ Sbjct: 107 RPTIHRQYGEDVAILAAVALLSSAFGVMVAAQGLSPECRSQ-AVAELSMAVGTQGLVQGQ 165 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L + E+ + KT+VLF A L++++L AG + RQ ++ + +LG A Sbjct: 166 YKDLR-EGTAPRSAEEIATTNELKTSVLFGATLQIAALAAGASPAARQKMRCFAQDLGQA 224 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 FQL+DD+ D GK+I +D GK TL +L Sbjct: 225 FQLLDDLADGHAGT---GKDINKD--AGKSTLVAMLG 256 >gi|153008460|ref|YP_001369675.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] gi|151560348|gb|ABS13846.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] Length = 304 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 10/214 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L + +A + D + +A A+E IH +L+HDD+ L Sbjct: 45 AMRHGVLNGGKRLRPFLVVESAALFGKGSDAVLRVAAALECIHCYSLVHDDLPAMDDDDL 104 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLVACTLAEGELRQLS 149 RRG+ + ++L GD LL+ AF ++ ++ +A L LV+ L + Sbjct: 105 RRGQPTVHKAFDEAAAILAGDGLLTYAFDIISSDETDLDAAIRLQLVSALARASGLGGMV 164 Query: 150 LSKNLDVTEE----DYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + LD+ E D +I KT L A E ++IA + R+ + +G +G Sbjct: 165 GGQALDLMAETSKPDEAGIITLQAMKTGALIRFACEAGAIIANASSEDRERMAEFGSAIG 224 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +AFQL DD+LD + MGK G+D GK TL Sbjct: 225 LAFQLADDLLDVTADAEAMGKATGKDAAAGKATL 258 >gi|328952416|ref|YP_004369750.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109] gi|328452740|gb|AEB08569.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109] Length = 296 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 18/243 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKRLRP+L LA A + + + +A A+E IHT +L+HDD+ Sbjct: 34 EAMRYSLLAGGKRLRPILCLAAAEAVAGNVEQVMPVAGALEMIHTYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAE----- 142 RRG+ + T++L GD LL+ AF ++ + +A V T+A Sbjct: 94 FRRGRPTCHKKFDEATAILAGDGLLTAAFEVLAAAATNHPAQASVYHEVVQTIARAAGYQ 153 Query: 143 ----GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--ALKS 196 G++ L L++ T E + + KT L +A++ +L+ G S R AL Sbjct: 154 GMVGGQMADL-LAEGQPSTLEQVEAIHRLKTGALLTASVRSGALLGG--GSARDILALTH 210 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 YG G+ FQ+ DD+LD GE EMGK G D K T P ++ + ++ + Sbjct: 211 YGEKFGLIFQITDDLLDVEGESAEMGKPTGMDAIRQKATYPAVMGVAAAKNQARDLVAAA 270 Query: 257 IND 259 + D Sbjct: 271 LVD 273 >gi|328949593|ref|YP_004366928.1| Polyprenyl synthetase [Marinithermus hydrothermalis DSM 14884] gi|328449917|gb|AEB10818.1| Polyprenyl synthetase [Marinithermus hydrothermalis DSM 14884] Length = 327 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 111/206 (53%), Gaps = 7/206 (3%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK LR L LATA + + A A+E L+HDD+ D S +RRG+ + Sbjct: 38 GGKLLRGQLLLATAQAHGAPPERALPAAAALELFQNWVLIHDDIEDASEMRRGRPTLHRL 97 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGELRQLSL--SKNLDVT 157 + ++ GD L + + +++E L+ + + T A G+ L+ ++ D++ Sbjct: 98 YSVPLALNAGDALHAVMWRVLLEAAYPTPVLQEFARLVETTARGQHLDLAWIEAERFDLS 157 Query: 158 EEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 EDYL +++ K A + A L++ +L+AG ++ A + G+ LG+AFQ++DDVL+ G Sbjct: 158 PEDYLEMVRQKAAYYTAVAPLKLGALVAG--HTPHPAFEPAGLQLGVAFQIIDDVLNLEG 215 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAF 242 ++ GK I D R GK TL ++L F Sbjct: 216 NPDKYGKEIAGDLREGKRTL-ILLRF 240 >gi|268680553|ref|YP_003304984.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268618584|gb|ACZ12949.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 286 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 21/203 (10%) Query: 41 GGKRLRPMLTL----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGK 94 GGKR RP+L L A+A +L +N + ++ +E +HT +L+HDD+ +D++ALRRG Sbjct: 39 GGKRFRPLLLLSVVEASAPLL---FENALHVSLGLEMMHTYSLIHDDLPCMDNAALRRGH 95 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS--- 151 + + T+VL+GD L + AF + ++ + LV+ + + + L Sbjct: 96 PTLHVTYDETTAVLIGDALNTHAFYRIANAPLSAEIK-VRLVSILAGDAGIYGMVLGQAL 154 Query: 152 ------KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 K LDV + +LHV KTA L +A+L + ++I + + ++ + ++G+ LG+ F Sbjct: 155 DCFFEDKRLDVEQLSFLHV--HKTAKLIAASLLMGAVICELDKATQETVYAFGLRLGLLF 212 Query: 206 QLVDDVLDYRGEVNEMGKNIGED 228 Q+ DD++D E GK D Sbjct: 213 QIQDDIIDATLSAEEAGKPTQND 235 >gi|160871987|ref|ZP_02062119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Rickettsiella grylli] gi|159120786|gb|EDP46124.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Rickettsiella grylli] Length = 294 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 22/198 (11%) Query: 32 DVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 D + Y + +GGKRLRP+ TL L L + +H+ ACAIEFIH +L+HDD+ +D+ Sbjct: 32 DAMIYAVLNGGKRLRPLYVYTLGNVLGLSLQDLDHI--ACAIEFIHAYSLIHDDLPCMDN 89 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ------------EALEALSL 135 RRGK + +G ++L GD L + AF +++ Q EA+ A + Sbjct: 90 DDWRRGKPSCHKQFGEAMALLAGDALQALAFDTLLKAPFQSLKVIKMLSVLTEAVGAQGM 149 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 VA + + + D + + +H +K T LF AA ++ ++ A + LK Sbjct: 150 VAGQAMD--FKDFNALGRSDRSNAENIHALK--TGSLFGAAFQLPAIAADLPQDHSLTLK 205 Query: 196 SYGMNLGIAFQLVDDVLD 213 + G +G+ FQ+ DD+ D Sbjct: 206 NVGHQVGLVFQIQDDICD 223 >gi|323693774|ref|ZP_08107969.1| geranyltranstransferase [Clostridium symbiosum WAL-14673] gi|323502160|gb|EGB18027.1| geranyltranstransferase [Clostridium symbiosum WAL-14673] Length = 294 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 69/250 (27%), Positives = 124/250 (49%), Gaps = 20/250 (8%) Query: 3 MLEDLTLKDMEKVNFLILKRICSD---VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 M+ + L+ E+V +I + ++ + I + + Y + +GGKRLRP+L + Sbjct: 1 MMNEQLLQSTEEVEQVIYSYLPAEEGHQKTIFEAMNYSVKAGGKRLRPLLMREVYRLFGG 60 Query: 60 RGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLL--- 114 G AIE IHT++L+HDD+ +D+ RRGK +V+G +VL GD LL Sbjct: 61 TGKEIEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVVYGYDMAVLAGDALLIYA 120 Query: 115 ----SQAFCMVIETKSQEALEALSLVA-----CTLAEGELRQLSLSKNLDVTEEDYLHVI 165 ++AF M SQ + + ++A + G+ + L+ L + ++ + Sbjct: 121 IETAARAFQMT--DNSQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKL-IPKDKLDFIY 177 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 + KT L AA+ + +++AG + + ++ +G+AFQ+ DD+LD +GK + Sbjct: 178 RLKTGALLEAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTSSQEVLGKPV 237 Query: 226 GEDFRNGKPT 235 D +N K T Sbjct: 238 LSDEKNNKTT 247 >gi|253998309|ref|YP_003050372.1| polyprenyl synthetase [Methylovorus sp. SIP3-4] gi|253984988|gb|ACT49845.1| Polyprenyl synthetase [Methylovorus sp. SIP3-4] Length = 295 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 24/279 (8%) Query: 19 ILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +L I +IP ++Y + GGKR+R +L A + A A+E I Sbjct: 17 VLDDILPAANIIPSRLHGAMRYAVLGGGKRVRALLAHAAGEFCQAPISAVEQSAAAVELI 76 Query: 75 HTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQE 128 H +L+HDD+ LRRGK + + + T++LVGD L + AF ++ E + Sbjct: 77 HAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQTLAFKVLAEPGLLRDAAR 136 Query: 129 ALEALSLVACT-----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 L + ++A +A G+ L+ S LD+T+ + + KT L AA + + Sbjct: 137 QLHMVHILAMASGSRGMAGGQAIDLA-SVGLDLTQTELEQMHIHKTGALIRAAALLGAES 195 Query: 184 AGVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 A ++ R +A+ Y +G+AFQ+VDD+LD + +GK G+D + KPT IL Sbjct: 196 ADTVDADRIKAVDHYAQAIGLAFQVVDDILDSEADTTTLGKTAGKDADSNKPTYVTILGL 255 Query: 243 QRGTKREKNFWKSTI------NDGKISVENLKKAFIIMR 275 +R + + + + D + ++ L K FI R Sbjct: 256 ERAKQLAQELYDEALAPLAAYGDSALRLQQLAK-FITQR 293 >gi|281354894|ref|ZP_06241388.1| Polyprenyl synthetase [Victivallis vadensis ATCC BAA-548] gi|281317774|gb|EFB01794.1| Polyprenyl synthetase [Victivallis vadensis ATCC BAA-548] Length = 355 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 86/323 (26%), Positives = 141/323 (43%), Gaps = 35/323 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D V+ GGKRLRP + + + +L + A A+E H TL+HDD++D R Sbjct: 32 DAVRDYPVRGGKRLRPAMLIWSCGLLGGSESAALYPAAAVEVFHNWTLVHDDIIDQDDTR 91 Query: 92 RG------KVAARLVW------------GNQTSVLVGDFLLSQAFCMVIETKSQ----EA 129 RG K+AA L G ++L GD A +++ + E Sbjct: 92 RGAPTSHVKLAAELGGRFSLAADDAERTGRDFAILAGDLQQGWANDLLLRSAEHGVPPEV 151 Query: 130 LEALS-----LVACTLAEGELR--QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 AL L L GE + SL + + ++ ++ KT L E ++ Sbjct: 152 TVALGRRFQKLANSDLISGEALDVEFSLRELTGLKSQEVRTMLGLKTGALLQFCTEAGAM 211 Query: 183 IA-----GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 IA VR+ L + + GIAFQL DD L G + +GK +G D R GK T+ Sbjct: 212 IALNTADAEHPDVRK-LSEFALAAGIAFQLRDDYLGIFGVYDSLGKALGNDLREGKATVM 270 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 ++ + + ++ I S +L IMR++ A E A ++A++ Sbjct: 271 LLDTLRLASAADREKLLGYIGRETYSDADLDDVRRIMRDSGAAASNEAEAARLAEQARNI 330 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 LR PD+ +++ L+++V+F + R Sbjct: 331 LRSFPDNPYRQHLLDLVNFLIDR 353 >gi|94985718|ref|YP_605082.1| polyprenyl synthetase [Deinococcus geothermalis DSM 11300] gi|94555999|gb|ABF45913.1| Polyprenyl synthetase [Deinococcus geothermalis DSM 11300] Length = 329 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 102/207 (49%), Gaps = 10/207 (4%) Query: 41 GGKRLRPMLTLATA-----LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGK +R L LA+A L + + LA +E L+HDD+ DDS RRG+ Sbjct: 36 GGKGIRSELLLASARAHGALPSTSAWEGALWLAAGLELFQNWVLIHDDIEDDSEERRGRP 95 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL--SKN 153 A ++G ++ VGD L + + V LE + AEG+ L+ ++ Sbjct: 96 ALHRLYGVPVAINVGDALHASMWAAVHRAGVPGGLEEFLNMVWRTAEGQHLDLTWVQERS 155 Query: 154 LDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 ++ E DYL +++ KTA+ L + +L AGV R + G LG AFQ+ DDVL Sbjct: 156 WNLGEADYLAMVRLKTALYTVVVPLRLGALAAGVLPDER--FTAAGEALGAAFQIRDDVL 213 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + G+ + GK IG D GK TL V+ Sbjct: 214 NLAGDPAKYGKEIGGDLWEGKRTLIVL 240 >gi|260548951|ref|ZP_05823173.1| polyprenyl synthetase [Acinetobacter sp. RUH2624] gi|260557259|ref|ZP_05829475.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606] gi|260408119|gb|EEX01590.1| polyprenyl synthetase [Acinetobacter sp. RUH2624] gi|260409365|gb|EEX02667.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606] Length = 303 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 131/272 (48%), Gaps = 24/272 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA + + A A+E IH +L HDD+ Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ--------EALEA 132 +D+ LRRG+ + +G T++L GD L S AF + + + Q + ++ Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSV 190 L+ + + G++ L ++ +++++ ++ ++KT L AA+ + ++ +G ++ Sbjct: 154 LATASSKMVCGQVLDLQ-AEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAI 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ YG +G+AFQ+ DD+LD +GK G+D + K T P ++ ++ K Sbjct: 213 PK-LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQVYAK 271 Query: 251 NFWKSTINDGKISVENLKK-----AFIIMREN 277 EN K+ F++ R N Sbjct: 272 ELHDQAFEALAHFGENAKELVEISQFLLARTN 303 >gi|317011137|gb|ADU84884.1| geranyltranstransferase [Helicobacter pylori SouthAfrica7] Length = 303 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 140/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALAGKKDYLNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + LV A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESHIIVELVKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G ++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGNKDEELFRWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 +G+ +G+ FQ++DD++D + E GK D + K + +L ++ + + Sbjct: 215 DFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLD--SAKNSFVNLLGLEKASAYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + L+ ++ ++EN AL++T ++ Sbjct: 273 VLND----LNALEPTYLSLQENLNALLNTLFKG 301 >gi|255022132|ref|ZP_05294135.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756] gi|254968396|gb|EET25955.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756] Length = 304 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 121/259 (46%), Gaps = 21/259 (8%) Query: 19 ILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +L + +++P + ++Y GGKR+RP+L A L + A A+E I Sbjct: 24 VLDELLPPADILPGRLHEAMRYSTLGGGKRVRPLLVYAGGQCLGLADELLDRAAAALEMI 83 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQ 127 H +L+HDD+ +D+ +RRG+ + T++LVGD LL+ AF ++ E +Q Sbjct: 84 HAYSLVHDDLPAMDNDDMRRGRPTCHKAFDEATAILVGDALLTHAFQVLAEPVPGLAPAQ 143 Query: 128 EALEALSLVACTLAEG-----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + AL L + G + ++ L + +H+ KT +L AL++ Sbjct: 144 QLAMALDLARAAGSRGMVGGQAIDLAAVGHELAQPALEQMHL--QKTGMLIRCALQLPLQ 201 Query: 183 IAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK-NIGEDFRNGKPTLPVI 239 A + SV AL Y +G+AFQ+ DD+LD G++ E GK G D KP+ + Sbjct: 202 AAAIAPDASVASALLRYADRIGLAFQVQDDILDEIGDIRETGKARQGADRSRQKPSFVSL 261 Query: 240 LAFQRGTKREKNFWKSTIN 258 L + + + ++ Sbjct: 262 LGLTEAQRYAQRLLEDALD 280 >gi|161504393|ref|YP_001571505.1| geranyltranstransferase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865740|gb|ABX22363.1| hypothetical protein SARI_02504 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 299 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 16/248 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A A+E IH +L+HDD+ Sbjct: 34 EAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDVPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + ++++A + Sbjct: 94 LRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAG 153 Query: 148 LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 + + LD+ E + + + KT L AA+ + +L AG + + L Y Sbjct: 154 MCGGQALDLAAEGHQISLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAE 213 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L G ++ +N I D Sbjct: 214 SIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQARNKAWDLIED 269 Query: 260 GKISVENL 267 + S+ L Sbjct: 270 ARQSLHQL 277 >gi|322376511|ref|ZP_08051004.1| geranyltranstransferase [Streptococcus sp. M334] gi|321282318|gb|EFX59325.1| geranyltranstransferase [Streptococcus sp. M334] Length = 291 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 27/230 (11%) Query: 34 VKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL- 90 V Y I +GGKR+RP L L AL + + H +A A+E IHT +L+HDD+ Sbjct: 31 VLYSIHAGGKRIRPFLLLEVLEALQVAIK-PAHAQVAAALEMIHTGSLIHDDLPAMDDDD 89 Query: 91 -RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ---EALEALSLVACTLA--- 141 RRG++ +G ++L GD L + ++ + SQ + + LSL + +L Sbjct: 90 YRRGRLTNHKKFGEAMAILAGDALFLDPYALIAQADLPSQIKVDLIANLSLASGSLGMVA 149 Query: 142 ------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 EGE + LSL E+ + +KT L + + +++IA + +++ LK Sbjct: 150 GQVLDMEGEHQHLSL--------EELQTIHANKTGKLLAYPFQAAAIIAELAPEMQEKLK 201 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + G +G+AFQ+ DDVLD E+GK +D K T P +L + Sbjct: 202 TVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLHAEKSTYPALLGLEEA 251 >gi|330962412|gb|EGH62672.1| CrtE [Pseudomonas syringae pv. maculicola str. ES4326] Length = 304 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 112/232 (48%), Gaps = 20/232 (8%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARL 99 GKR+RPML + A L + + L CA+E IH A+L+ DD+ +DD+ LRRG L Sbjct: 57 GKRVRPMLLMLAADGLGHDSSAALELGCAVEMIHAASLVLDDMPCMDDARLRRGLPTVHL 116 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 +G ++L LLS+AF +V LV ++ L + D+ Sbjct: 117 KFGQDVAILAAVALLSRAFGVVAGISEVPPAVRTQLVGVLANAVGMQGLVRGQFQDL--H 174 Query: 160 DYLH---------VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 D LH + KT VLFSA ++++SL++G R L+ + LG AFQL DD Sbjct: 175 DGLHSRDAEQIATTNRLKTGVLFSAIMDMASLVSGADEGTRAGLQDFATELGQAFQLYDD 234 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 + D + + K+ G+D GK T + Q+ T++ + K DG + Sbjct: 235 LQD---KSADNAKDQGKD--EGKSTFVALYGEQKVTEQLRAHLKKA--DGHL 279 >gi|261838303|gb|ACX98069.1| geranyltranstransferase [Helicobacter pylori 51] Length = 303 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 139/273 (50%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESPIIVELIKILSVNGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMVLGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ G+ FQ++DD++D + E GK D K + +L ++ + Sbjct: 215 AFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLD--GVKNSFVNLLGLEKANDYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + LK A+ +++EN AL++T ++ Sbjct: 273 VLNDLNL----LKPAYSLLQENLNALLNTLFKG 301 >gi|254468449|ref|ZP_05081855.1| geranyltranstransferase [beta proteobacterium KB13] gi|207087259|gb|EDZ64542.1| geranyltranstransferase [beta proteobacterium KB13] Length = 290 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 20/217 (9%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 +KY I +GGKR+R L + +L +IE IH +L+HDD+ LR Sbjct: 33 IKYAISNGGKRIRAYLLFTLGKHFGISKNVLNILGASIEMIHAYSLVHDDLPCMDDDDLR 92 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK----SQEALEALSLVACTLAEGELRQ 147 RGK+ + ++LVGD L S AF ++ K + LE ++L+A ++ + Sbjct: 93 RGKLTCHKKFDEAQALLVGDALQSLAFELLSSNKLKIDPELKLECINLLASSIGS---KG 149 Query: 148 LSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + L ++LD+ E + +H ++KT +L S + + S+I+ +NS + LK Sbjct: 150 MVLGQSLDMIYEKKKPTKKIIEKIH--RNKTGMLISTCILIPSIISRQRNSTHKNLKILS 207 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 NLG+ +Q+VDD LD +V ++GKN G+D + K T Sbjct: 208 ENLGLLYQMVDDYLDATSDVEKLGKNPGKDHQREKVT 244 >gi|148993815|ref|ZP_01823217.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae SP9-BS68] gi|168489033|ref|ZP_02713232.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae SP195] gi|147927640|gb|EDK78665.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae SP9-BS68] gi|183572405|gb|EDT92933.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae SP195] gi|332073546|gb|EGI84025.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA17570] Length = 291 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 27/229 (11%) Query: 34 VKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL- 90 V Y I +GGKR+RP L L AL + + H +A A+E IHT +L+HDD+ Sbjct: 31 VLYSIHAGGKRIRPFLLLEVLEALQVAIK-PAHAQVATALEMIHTGSLIHDDLPAMDDDD 89 Query: 91 -RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ---EALEALSLVACTLA--- 141 RRG++ +G ++L GD L + ++ + SQ + + +LSL + +L Sbjct: 90 YRRGRLTNHKKFGEAMAILAGDALFLDPYALIAQADLPSQIKVDLIASLSLASGSLGMVA 149 Query: 142 ------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 EGE + LSL E+ + +KT L + + +++IA + ++ LK Sbjct: 150 GQVLDMEGEHQHLSL--------EELQTIHANKTGKLLAYPFQAAAIIAELSPEMQVKLK 201 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + G +G+AFQ+ DDVLD E+GK +D + K T P +L + Sbjct: 202 TVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALLGLEE 250 >gi|260596789|ref|YP_003209360.1| geranyltranstransferase [Cronobacter turicensis z3032] gi|260215966|emb|CBA28595.1| Geranyltranstransferase [Cronobacter turicensis z3032] Length = 299 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 22/234 (9%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDVVDDSA--L 90 Y GGKRLRP L AT M G N L A AIE IH +L+HDD+ L Sbjct: 38 YGTLLGGKRLRPFLVYATGEMF---GVNPTALDAPAAAIECIHAYSLMHDDLPAMDDDDL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVACTLAEGELRQL 148 RRG+ + +G +++L GD L + AF ++ + + + L++V+ + + Sbjct: 95 RRGQPTCHIRFGEASAILAGDALQTLAFSILSDAPMENVALRDRLAMVSELAKASGVAGM 154 Query: 149 SLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQAL---KSYG 198 + LD+ E D L I + KT L AA+ + +L AG + R AL SY Sbjct: 155 CGGQALDLEAEGQQVDLDALERIHRHKTGALIRAAVRMGALCAG--DKGRDALVYLDSYA 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ + ++ Sbjct: 213 ESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQAQAKARSL 266 >gi|75674693|ref|YP_317114.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255] gi|74419563|gb|ABA03762.1| farnesyl-diphosphate synthase [Nitrobacter winogradskyi Nb-255] Length = 308 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 23/256 (8%) Query: 19 ILKRICSDVEM---------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 +L+++ SD + + D ++Y GGKRLRP L + ++ + + +L Sbjct: 24 VLEKLLSDAPLPDEIARPRRLTDAMRYSSLGGGKRLRPFLVVESSAVFGVPREAALLAGA 83 Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETK 125 A+E IH +L+HDD+ +D+S LRRG+ + T++L GD LL+ AF ++ E Sbjct: 84 ALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDATAILAGDGLLTLAFDIITRDEVH 143 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAA 176 A+ L A A G + + + LD+ E D V + KT L Sbjct: 144 DDPAVRLLLTRALARAAG-IGGMVGGQLLDLAGEGRFGDRGPVDVARVQQMKTGALLRFG 202 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +L+ QAL +YG LG AFQ+ DD+LD + +GK G D GK T Sbjct: 203 CIAGALLGQASQKDYQALDAYGRALGEAFQIADDLLDVESDAAALGKPTGADAALGKTTF 262 Query: 237 PVILAFQRGTKREKNF 252 L KR ++ Sbjct: 263 VTQLGIDGAKKRVRDL 278 >gi|15594659|ref|NP_212448.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi B31] gi|2688215|gb|AAC66696.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi B31] Length = 347 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 26/219 (11%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GGKR+RPM+ + A L + N L L+ +E H+ +L+ DD+ D+S RRG A Sbjct: 57 GGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIEDNSLKRRGASAI 116 Query: 98 RLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 L++G S+ G+ + L K + L TL+ L L + +D Sbjct: 117 HLIYGIDNSINAGNLIYFLPAKLIEKSNLKENQKLLIYENFFTTLS-----NLHLGQGID 171 Query: 156 V---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG--MNLGIA 204 + + ++Y+ +++ KTA LF A S L A + N+ +A K Y + LG+ Sbjct: 172 IKFHNESYIPSIKEYISLVELKTASLFGMA---SFLAAILTNNEDKAKKIYSTFLKLGVY 228 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 FQ++DD+ + + ++N GK G+D GK +LP+I Q Sbjct: 229 FQIIDDIKNIKNKIN--GKEFGDDLLEGKKSLPIIYFLQ 265 >gi|332992374|gb|AEF02429.1| geranyltranstransferase [Alteromonas sp. SN2] Length = 296 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 19/239 (7%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D + + +++ + GGKR+RP+L L+ + + ++ AIE +H +L+HDD+ Sbjct: 28 DAPRLKEAMRHALLVGGKRMRPLLVQVIGNTLDVPKGDQMAISMAIECVHAYSLVHDDLP 87 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLVAC 138 LRRG+ + + T++L GD L + AF + + + + E LS++A Sbjct: 88 AMDDDDLRRGQPTCHIAFDEATAILAGDALQALAFSTLADAPLSDFATNKRGELLSVLA- 146 Query: 139 TLAEGELRQLSLSKNLDVT---EEDYLHVIKS----KTAVLFSAALEVSSLIAGVQNSVR 191 A G R + + +D+T EE L +K KT L A +E+ S+++ +S Sbjct: 147 -RAAG-YRGMCGGQAIDLTSTGEEISLEQLKRLHNLKTGALLRACVEMVSIVSQDLDSNS 204 Query: 192 QA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +A L +Y ++G+AFQ+ DD+LD G ++GK G D GK T P L + G KRE Sbjct: 205 KADLLAYADDIGLAFQVQDDILDVEGNSEQLGKPAGSDIALGKNTFPAKLGIE-GAKRE 262 >gi|32490894|ref|NP_871148.1| hypothetical protein WGLp145 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166100|dbj|BAC24291.1| ispA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 300 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 132/266 (49%), Gaps = 26/266 (9%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 +KY + +GGKRLR L ML +N +A +IE IH +L+HDD+ +D+ R Sbjct: 37 MKYALLNGGKRLRAFLVYCIGKMLNVSSNNLDCIAASIECIHAYSLIHDDLPSMDNDRFR 96 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVACTLAEGELR 146 RG+ + + + ++L GD L S AF ++ + ++ +S++ + A G + Sbjct: 97 RGRESCHVKFNEYIAILAGDSLQSLAFNILSTVNMPDVSVNNRMKMISIL--SYASGA-K 153 Query: 147 QLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYG 198 + L ++LD+ + L + K KT+ L AA ++ L + ++N + L Y Sbjct: 154 GMCLGQSLDLENQGSLISIKQLEEIYKYKTSFLIYAATRMTILSSNIKNKKILINLIKYS 213 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST-- 256 ++G+AFQ+ DD+L+ G GK G D + K T ++ + ++ N +K + Sbjct: 214 KSIGLAFQIQDDILNVIGSKKITGKCQGSDKKLNKNTYSSLIGIKLSKEKAFNLYKKSLS 273 Query: 257 ----INDGKISVENLKK--AFIIMRE 276 IN+ + E+L K +II+R Sbjct: 274 YLEYINELGYNTESLIKLAHYIIIRN 299 >gi|256962594|ref|ZP_05566765.1| polyprenyl synthetase [Enterococcus faecalis HIP11704] gi|257086340|ref|ZP_05580701.1| polyprenyl synthetase [Enterococcus faecalis D6] gi|307271992|ref|ZP_07553259.1| geranyltranstransferase [Enterococcus faecalis TX0855] gi|256953090|gb|EEU69722.1| polyprenyl synthetase [Enterococcus faecalis HIP11704] gi|256994370|gb|EEU81672.1| polyprenyl synthetase [Enterococcus faecalis D6] gi|306511339|gb|EFM80342.1| geranyltranstransferase [Enterococcus faecalis TX0855] gi|315026958|gb|EFT38890.1| geranyltranstransferase [Enterococcus faecalis TX2137] Length = 293 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 122/259 (47%), Gaps = 25/259 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC------------MVIETKSQEA 129 + LRRGK V+G T++L GD LL+ AF +++ K +A Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQKLAKA 143 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +VA + + E ++SL T E+ V + KT L AL ++A Sbjct: 144 AGNQGMVAGQMGDIEGEKVSL------TLEELAAVHEKKTGALIEFALIAGGVLANQTEE 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L + + G+AFQ+ DD+LD ++GK +G D K T P +L G Sbjct: 198 VIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGA 253 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + +G +E +K Sbjct: 254 KDALTHQLAEGSAVLEKIK 272 >gi|291562669|emb|CBL41485.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium SS3/4] Length = 297 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 121/253 (47%), Gaps = 17/253 (6%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +K+ E V + L + I + + Y + +GGKRLRP+L + G Sbjct: 13 VKETETVVYSYLPEETGHQKTIFEAMNYSVKAGGKRLRPLLMREVYRLFGGNGPEIKPFM 72 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLL-------SQAFC 119 A+E IHT++L+HDD+ +D+ RRGK+ +G +VL GD L+ S+AF Sbjct: 73 AAMEMIHTSSLIHDDLPCMDNDEYRRGKLTTWKAYGYDMAVLAGDALMIYAFETASKAFS 132 Query: 120 MVIETKSQEALEALSLVA-----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 M + +A A+ ++A + G+ + L+ V E + + KT L Sbjct: 133 MGAD--PAKAGRAIGILAEKTGIYGMIGGQTVDVELTGKA-VPREKLDFIYRLKTGALLE 189 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A++ + +++AG + +++ +G+AFQ+ DD+LD E+GK + D +N K Sbjct: 190 ASMMIGAVLAGATVEEIKEVETMASEVGLAFQIQDDILDVTSTQEELGKPVLSDEKNEKT 249 Query: 235 TLPVILAFQRGTK 247 T + ++ + Sbjct: 250 TYVTLEGLEKAKR 262 >gi|256847381|ref|ZP_05552827.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256716045|gb|EEU31020.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 287 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 16/231 (6%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA-CAIEFIHTATLLHD 82 C++ + + Y + +GGKRLRP LTLA + + VL A CA+E +HT +L+HD Sbjct: 21 CAEPTLATSTI-YSLMAGGKRLRPALTLAICDAFQQSINQDVLRASCAVELLHTYSLIHD 79 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 D+ +D+ LRRG +G + L GD LL+ AF + + LSLV Sbjct: 80 DLPAMDNDDLRRGLPTNHRRFGAGMATLAGDGLLTLAFQWLSDNNLATTTR-LSLVRELA 138 Query: 141 AEGELRQLSLSKNLDVTEEDY---------LHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + + +D+ E + LH + KT L A+ +I + Sbjct: 139 TAAGPAGMVAGQAMDIHNEGHHLALPDLQLLH--EKKTGALIRYAVLAGGIITNQAPETK 196 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 L +G G+AFQ+ DD++D G +MGK + +D K T P +L Sbjct: 197 HLLARFGEYYGLAFQIYDDLMDVVGSEAQMGKAVHKDQVEAKNTYPGLLGL 247 >gi|332686260|ref|YP_004456034.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/ geranyltranstransferase [Melissococcus plutonius ATCC 35311] gi|332370269|dbj|BAK21225.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/ geranyltranstransferase (farnesyldiphosphate synthase)/ geranylgeranyl pyrophosphate synthetase [Melissococcus plutonius ATCC 35311] Length = 296 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 13/220 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDSALRR 92 Y I +GGKRLRP+L LAT + A A+E +HT +L+HDD+ +D+ LRR Sbjct: 38 YSIQAGGKRLRPLLLLATINSFNCPIEQGAYQTAAALEMLHTYSLIHDDLPAMDNDDLRR 97 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEAL-EALSLVACT--LAEGEL 145 GK ++G ++L GD LL+ AF ++ IE + L + L A T + G+ Sbjct: 98 GKPTNHKIFGEALAILAGDGLLTGAFQLLALSTIEAGKKILLTQLLGQTAGTEGMVAGQS 157 Query: 146 RQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L K L++ E +H + KT L + ++A + LK G+A Sbjct: 158 GDLQGEKKALNLQELSEVH--RKKTGALIEFSFMAGGILANQSEEIIYLLKQLANAFGLA 215 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 FQ+ DD+LD G + GK IG D K T P +L ++ Sbjct: 216 FQIRDDLLDVIGSEEKQGKKIGRDQCLNKSTYPALLGIEK 255 >gi|307706648|ref|ZP_07643455.1| geranyltranstransferase [Streptococcus mitis SK321] gi|307618103|gb|EFN97263.1| geranyltranstransferase [Streptococcus mitis SK321] Length = 291 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 79/287 (27%), Positives = 135/287 (47%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALQVA 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + ++ + SQ + + LSL + +L EGE + L+L E+ Sbjct: 117 PYALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLAL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELAPEMQAKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L + F T++ +E++ + Sbjct: 229 KTPQKDLQAEKSTYPALLGLEEAIA----FCNQTLDQANAKLEDIAQ 271 >gi|27376057|ref|NP_767586.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110] gi|27349196|dbj|BAC46211.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110] Length = 307 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 12/233 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y +GGKRLRP L + +A + + +L A+E IH +L+HDD+ +D+S Sbjct: 45 DAMRYSSLNGGKRLRPFLVVESAAVFGVPREAALLAGAALECIHCYSLIHDDLPAMDNSD 104 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE------- 142 LRRG+ + T++L GD LL+ AF +V + L+ LA Sbjct: 105 LRRGRPTLHKKTDDATAILAGDGLLTLAFDIVTRDEIHRDANVRLLLTRALARCAGIGGM 164 Query: 143 --GELRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G++ L+ E D + + KT L +++ QAL YG Sbjct: 165 VGGQILDLAGEGRFGGNEPIDVARIQQMKTGALLRYGCIAGAILGQATAKEYQALDDYGR 224 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 LG AFQ+ DD+LD G+ +GK G+D GK T L + +R ++ Sbjct: 225 ALGEAFQIADDLLDVEGDAAALGKPSGQDAALGKTTFVTQLGIEGAKQRVRDL 277 >gi|169794893|ref|YP_001712686.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii AYE] gi|213157703|ref|YP_002320501.1| polyprenyl synthetase [Acinetobacter baumannii AB0057] gi|215482441|ref|YP_002324625.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB307-0294] gi|301347512|ref|ZP_07228253.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB056] gi|301512686|ref|ZP_07237923.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB058] gi|301597254|ref|ZP_07242262.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB059] gi|332855972|ref|ZP_08436103.1| polyprenyl synthetase [Acinetobacter baumannii 6013150] gi|332870742|ref|ZP_08439424.1| polyprenyl synthetase [Acinetobacter baumannii 6013113] gi|169147820|emb|CAM85683.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii AYE] gi|193078216|gb|ABO13173.2| geranyltranstransferase [Acinetobacter baumannii ATCC 17978] gi|213056863|gb|ACJ41765.1| polyprenyl synthetase [Acinetobacter baumannii AB0057] gi|213985840|gb|ACJ56139.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB307-0294] gi|332727208|gb|EGJ58659.1| polyprenyl synthetase [Acinetobacter baumannii 6013150] gi|332732037|gb|EGJ63312.1| polyprenyl synthetase [Acinetobacter baumannii 6013113] Length = 303 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 131/272 (48%), Gaps = 24/272 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA + + A A+E IH +L HDD+ Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ--------EALEA 132 +D+ LRRG+ + +G T++L GD L S AF + + + Q + ++ Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSV 190 L+ + + G++ L ++ +++++ ++ ++KT L AA+ + ++ +G ++ Sbjct: 154 LATASSKMVCGQVLDLQ-AEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAI 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ YG +G+AFQ+ DD+LD +GK G+D + K T P ++ ++ K Sbjct: 213 PK-LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAK 271 Query: 251 NFWKSTINDGKISVENLKK-----AFIIMREN 277 EN K+ F++ R N Sbjct: 272 ELHDQAFEALAHFGENAKELVEISQFLLARTN 303 >gi|156935030|ref|YP_001438946.1| geranyltranstransferase [Cronobacter sakazakii ATCC BAA-894] gi|156533284|gb|ABU78110.1| hypothetical protein ESA_02881 [Cronobacter sakazakii ATCC BAA-894] Length = 299 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 22/234 (9%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDVVDDSA--L 90 Y GGKRLRP L AT M G N L A AIE IH +L+HDD+ L Sbjct: 38 YGTLLGGKRLRPFLVYATGEMF---GVNPTALDAPAAAIECIHAYSLMHDDLPAMDDDDL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVACTLAEGELRQL 148 RRG+ + +G +++L GD L + AF ++ + + + L++V+ + + Sbjct: 95 RRGQPTCHIRFGEASAILAGDALQTLAFSILSDAPMENVALRDRLAMVSELAKASGVAGM 154 Query: 149 SLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQAL---KSYG 198 + LD+ E D L I + KT L AA+ + +L AG + R AL SY Sbjct: 155 CGGQALDLEAEGQQVDLDALERIHRHKTGALIRAAVRMGALCAG--DKGRDALVYLDSYA 212 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ + ++ Sbjct: 213 DSIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQAQAKARSL 266 >gi|119502847|ref|ZP_01624932.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080] gi|119461193|gb|EAW42283.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080] Length = 280 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 11/242 (4%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACA 70 M VN C D + ++Y++ + GK+LR L +A+ ML E D A A Sbjct: 1 MSDVNQPEAPLHCDDPRLAA-ALQYVLENSGKKLRARLVMASYHMLCEGADDAAASAATA 59 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--- 125 IE++HT +L+HDD+ +DD ALRRGK V+ T++L+GD L + AF ++ E + Sbjct: 60 IEWLHTYSLVHDDLPAMDDDALRRGKPTVHTVYDEATAILIGDGLQAAAFSLISEDERLA 119 Query: 126 SQEALEALSLVACTLAEGEL---RQLSLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSS 181 S L+ ++L+A + + + L ++ + + L +I + KT LF AA+ + Sbjct: 120 SGTRLKLITLIANAVGFNGMVGGQALDMAAQGKASTFEQLRLIHEQKTGALFRAAVLSGA 179 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + A Q L + +G+AFQ+ DD+LD +GK G+D K T L Sbjct: 180 VCANATEQDIQRLDQFASTIGLAFQVADDILDVTENSATLGKTAGKDIAVEKSTYVSCLG 239 Query: 242 FQ 243 + Sbjct: 240 LE 241 >gi|261839715|gb|ACX99480.1| geranyltranstransferase (ispA) [Helicobacter pylori 52] Length = 303 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 140/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ A G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELIKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMILGQALDCYFENTPLSLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEGLFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ G+ FQ++DD++D + E GK D + K + +L + + + Sbjct: 215 AFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLD--SAKNSFVNLLGLEEASGYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 ++D + LK + +++EN AL++T ++ Sbjct: 273 VLDDLNL----LKPTYPLLQENLNALLNTLFKG 301 >gi|209559666|ref|YP_002286138.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Streptococcus pyogenes NZ131] gi|209540867|gb|ACI61443.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Streptococcus pyogenes NZ131] Length = 221 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 106/199 (53%), Gaps = 17/199 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 E + D + Y + SGGKR+RP++ L M+E G + H LA A+E IHT +L+HDD Sbjct: 24 EELIDAILYSVDSGGKRIRPLILLE---MIEGFGVSLQNAHFDLAAALEMIHTGSLIHDD 80 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + +D+ RRG++ +G T++L GD L F ++ + + ++ + +LA Sbjct: 81 LPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQAELNSEVKVALIQELSLA 140 Query: 142 EGELRQLSLSKNLDVTEEDY------LHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQAL 194 G + + LD+ E+ L +I +KT L + + ++L+ +VRQ L Sbjct: 141 SGTFGMVG-GQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQL 199 Query: 195 KSYGMNLGIAFQLVDDVLD 213 + GM +G AFQ+ DD+LD Sbjct: 200 EQAGMLIGHAFQIRDDILD 218 >gi|289178875|gb|ADC86121.1| Dimethylallyltransferase [Bifidobacterium animalis subsp. lactis BB-12] Length = 376 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 117/240 (48%), Gaps = 31/240 (12%) Query: 41 GGKRLRPMLTLATALMLEYRGDN--------HVL-LACAIEFIHTATLLHDDVVDDSALR 91 GGKRLR +LTL +L D+ VL ACAIE TA L+HDD++DDS LR Sbjct: 62 GGKRLRALLTLDAYDVLAGAPDSTQSRSVRTKVLDFACAIEVFQTAALVHDDLIDDSDLR 121 Query: 92 RGKVAARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 RGK +A G +++GD +L+ A +++E S +E LV L+ Sbjct: 122 RGKPSAHCALTSFAGARSIGRGLGLMLGD-MLATACTLIMEDASTGMVEHRRLVEAFLSM 180 Query: 143 ------GELRQLSLSK-NLDVTE---EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 G++ L++ + LD + E L V + KTA + A + + +A S Sbjct: 181 QHDVEVGQVLDLAIERMPLDDPQALAEASLDVFRWKTASYTTIAPLMLAFLASGMTSEAA 240 Query: 193 ALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L + G+ LG AFQL DD+LD G GK +G D R GK T+ + A GT ++ Sbjct: 241 NLHCHAIGLPLGQAFQLADDLLDVTGSSRSTGKPVGGDIREGKRTVLLADAMMLGTAAQR 300 >gi|332074819|gb|EGI85291.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA41301] Length = 291 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 80/287 (27%), Positives = 134/287 (46%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALQVA 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + ++ + SQ + + LSL + +L EGE + LSL E+ Sbjct: 117 PYALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L + F T++ +E + + Sbjct: 229 KTPQKDLQAEKSTYPALLGLEEAIA----FCNQTLDQANAKLEEIAQ 271 >gi|94497294|ref|ZP_01303865.1| Polyprenyl synthetase [Sphingomonas sp. SKA58] gi|94423157|gb|EAT08187.1| Polyprenyl synthetase [Sphingomonas sp. SKA58] Length = 302 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 14/229 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D +++ GGKRLRP+L A + ++ + + AIE IH +L+HDD+ Sbjct: 42 DAMRHAAIGGGKRLRPLLVQAACDLFHISRESALRVGLAIECIHVYSLIHDDLPAMDDDD 101 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVA--CTL 140 +RRGK + T++L GD L AF ++ + ++ E ++AL+ + + Sbjct: 102 MRRGKPTVHKAFDEATAILAGDCLHDLAFEVLADAETHPDPFVRIELVKALATCSGPAGM 161 Query: 141 AEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A G++ L + D+ L +K+ + F +E ++++A + R L Y Sbjct: 162 AGGQMMDLEAERTRFDLATVTRLQNLKTGALICFC--VEAAAIMARLPQEARTGLHGYAR 219 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 ++G+AFQ+ DD+LD G+V GK +G+D GK T +L + +R Sbjct: 220 DIGLAFQIADDLLDVEGDVALAGKALGKDAAAGKETFVSLLGVEAARER 268 >gi|61653218|gb|AAX48172.1| geranylgeranyl pyrophosphate synthase [uncultured proteobacterium DelRiverFos13D03] Length = 293 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 20/236 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--D 86 + Y + GG R+RP + L+ A+ GD+ L A A+E IH A+L+HDD+ D Sbjct: 30 ALHYAVTPGGARIRPTILLSVAMAC---GDDRPALSDAGAVALEMIHCASLVHDDLPCFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-----ACTLA 141 D+ RRGK + +VL GD L+ AF ++ E +A AL ++ + Sbjct: 87 DADTRRGKATVHKAFSEPLAVLTGDSLIVLAFDILAEAAGDDAKRALQMIRVLSRRTGMP 146 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 +G +V Y H ++KT LF AA ++ +L AG Q+ + + G + Sbjct: 147 DGICAGQGWESEAEVNLSAY-H--RAKTGALFIAATQMGALAAG-QDC--EPWEELGARI 200 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 G AFQ+ DD+ D + +GK G+D +G+P Q + K+ I Sbjct: 201 GEAFQVADDLRDALYDAEALGKPAGQDEAHGRPNAVSAYGVQGAIRHLKDILGGAI 256 >gi|110635757|ref|YP_675965.1| farnesyl-diphosphate synthase [Mesorhizobium sp. BNC1] gi|110286741|gb|ABG64800.1| farnesyl-diphosphate synthase [Chelativorans sp. BNC1] Length = 305 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 12/207 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L L +A + E +G + +A A+E +H +L+HDD+ L Sbjct: 46 AMRHGVLNGGKRLRPFLVLESAALFEAQGMASLRVAAALECVHCYSLIHDDLPAMDDDDL 105 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVACTLAEGELRQL 148 RRG+ + T++L GD LL+ AF ++ ET + + A LV + + Sbjct: 106 RRGQPTVHRAFDEATAILAGDSLLTYAFDIIADAETDLRPEIRA-DLVVKLATAAGMGGM 164 Query: 149 SLSKNLDVTEE----DYLHVIK---SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ E D + +++ KT LF A E +++A ++ R+ + S+G + Sbjct: 165 AGGQALDLLAEKVPPDEVGIVQLQAMKTGALFRFACEAGAIVADASSADRERMSSFGAAI 224 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGED 228 G+AFQL DD+LD + +GK G+D Sbjct: 225 GLAFQLADDLLDLTASADAVGKATGKD 251 >gi|152990006|ref|YP_001355728.1| geranyltranstransferase [Nitratiruptor sp. SB155-2] gi|151421867|dbj|BAF69371.1| geranyltranstransferase [Nitratiruptor sp. SB155-2] Length = 290 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 23/225 (10%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL------ACAIEF 73 L + S D + Y++ +GGKR RP+L L+ + N +L+ A AIE Sbjct: 15 LPHVQSFHPFYTDALGYMLQAGGKRFRPLLLLSIV-----QAKNPLLIPSALDVAMAIEI 69 Query: 74 IHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEAL 130 HT +L+HDD V+DD+ LRRGK + T+VLVGD L + AF C+ S + Sbjct: 70 FHTYSLIHDDLPVMDDADLRRGKETLHKKYDELTAVLVGDALNTYAFYCIAKSALSSDTR 129 Query: 131 EALSLVACT------LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 L+ + + G++ ++ L + + LH+ +KTA L +A+L++ ++I Sbjct: 130 AKLTEILAQNGGIEGMVHGQILDCYFENQKLSLEQLQQLHI--NKTAKLIAASLQMGAVI 187 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 + + L ++G++LG+ FQ+ DD++D E GK D Sbjct: 188 VDLPFIEQNRLYNFGIDLGLLFQIQDDIIDKVATSEEAGKTTQND 232 >gi|170025469|ref|YP_001721974.1| geranyltranstransferase [Yersinia pseudotuberculosis YPIII] gi|169752003|gb|ACA69521.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII] Length = 306 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 16/240 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M N A AIE IH +L+HDD+ Sbjct: 41 EAMRYGAVIGGKRLRPYLVYATGQMFGLSFANLDAPAAAIECIHAYSLIHDDLPAMDDDD 100 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG+ + +G ++L GD L + AF ++ E + + LS++ Sbjct: 101 LRRGQPTCHVKFGEAHAILAGDALQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAG 160 Query: 148 LSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS---Y 197 + + LD+ E D + + KT L AA+ + +L AG + R+ L S Y Sbjct: 161 MCAGQALDLEAETRPVLLGDLEQIHRHKTGALIRAAVRLGALAAG--EAGRKTLLSLDRY 218 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ +GK G D + GK T P +L + + ++ + Sbjct: 219 AEAIGLAFQVQDDILDVIGDTATIGKRQGSDQQLGKSTYPALLGLDCAQTKAMDLYQEAL 278 >gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp. lyrata] gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp. lyrata] Length = 360 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 125/232 (53%), Gaps = 20/232 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + V+Y + +GGKR+RPML +A+ ++ + ACA+E IHT++L+HDD+ +D+ Sbjct: 93 VQEAVRYSLLAGGKRVRPMLCIASCELVGGNEATAMPAACAVEMIHTSSLIHDDLPCMDN 152 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF--------CMVIETKSQEALEALSLVACT 139 + LRRGK V+G +VL GD LL+ AF +V + A+ L+ T Sbjct: 153 ADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVPPERMIRAVAELARAIGT 212 Query: 140 --LAEGELRQLSLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L G++ L+ S+ L+ + +++H+ KTA L AA + ++ G + Sbjct: 213 TGLVAGQMIDLA-SERLNPHDAGLERLEFIHL--HKTAALLEAAAVLGVIMGGGTEEEIE 269 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P ++ +R Sbjct: 270 KLRKYARCIGLLFQVVDDILDVTESTEELGKTAGKDLMAGKLTYPRLIGLER 321 >gi|326693827|ref|ZP_08230832.1| geranylgeranyl pyrophosphate synthase [Leuconostoc argentinum KCTC 3773] Length = 299 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 116/215 (53%), Gaps = 31/215 (14%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTAT 78 LK+I +D + +++ Y + +GGKRLRP+LTLA + L LA A+E++H+ + Sbjct: 23 LKQITTDAQ-FSEMMAYAVLNGGKRLRPLLTLAVISSFQQATTPQALKLATAVEWVHSYS 81 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--------ETKSQE 128 L+HDD+ +D+ LRRG+ + +G ++LVGD LL+ AF +V ETK + Sbjct: 82 LVHDDLPAMDNDLLRRGQPSVHAKFGEAAAILVGDALLTGAFEVVTTANALAPDETKIPD 141 Query: 129 ALEALSLVACTLAE---------GELRQL-SLSKNLDVTEEDYL--HVIKSKTAVLFSAA 176 + + + LA G++ + + +NL TE D+L + KTA L A Sbjct: 142 --QTIVTIVQDLAHFSGAAGMVIGQMHDMGNHGQNLQ-TETDWLLQEIYTPKTAALIQFA 198 Query: 177 LEVSSLIAGVQNS----VRQALKSYGMNLGIAFQL 207 ++ + +A +Q + QA+ +G++ G+AFQ+ Sbjct: 199 AKLGAQLATLQQTQVPEATQAMTQFGLDFGLAFQI 233 >gi|183601372|ref|ZP_02962742.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium animalis subsp. lactis HN019] gi|219683427|ref|YP_002469810.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium animalis subsp. lactis AD011] gi|241191129|ref|YP_002968523.1| bifunctional short chain isoprenyl diphosphatesynthase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196535|ref|YP_002970090.1| bifunctional short chain isoprenyl diphosphatesynthase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218978|gb|EDT89619.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium animalis subsp. lactis HN019] gi|219621077|gb|ACL29234.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium animalis subsp. lactis AD011] gi|240249521|gb|ACS46461.1| bifunctional short chain isoprenyl diphosphatesynthase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251089|gb|ACS48028.1| bifunctional short chain isoprenyl diphosphatesynthase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794118|gb|ADG33653.1| bifunctional short chain isoprenyl diphosphatesynthase [Bifidobacterium animalis subsp. lactis V9] Length = 366 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 117/240 (48%), Gaps = 31/240 (12%) Query: 41 GGKRLRPMLTLATALMLEYRGDN--------HVL-LACAIEFIHTATLLHDDVVDDSALR 91 GGKRLR +LTL +L D+ VL ACAIE TA L+HDD++DDS LR Sbjct: 52 GGKRLRALLTLDAYDVLAGAPDSTQSRSVRTKVLDFACAIEVFQTAALVHDDLIDDSDLR 111 Query: 92 RGKVAARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 RGK +A G +++GD +L+ A +++E S +E LV L+ Sbjct: 112 RGKPSAHCALTSFAGARSIGRGLGLMLGD-MLATACTLIMEDASTGMVEHRRLVEAFLSM 170 Query: 143 ------GELRQLSLSK-NLDVTE---EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 G++ L++ + LD + E L V + KTA + A + + +A S Sbjct: 171 QHDVEVGQVLDLAIERMPLDDPQALAEASLDVFRWKTASYTTIAPLMLAFLASGMTSEAA 230 Query: 193 ALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L + G+ LG AFQL DD+LD G GK +G D R GK T+ + A GT ++ Sbjct: 231 NLHCHAIGLPLGQAFQLADDLLDVTGSSRSTGKPVGGDIREGKRTVLLADAMMLGTAAQR 290 >gi|120602763|ref|YP_967163.1| polyprenyl synthetase [Desulfovibrio vulgaris DP4] gi|120562992|gb|ABM28736.1| farnesyl-diphosphate synthase [Desulfovibrio vulgaris DP4] gi|311233551|gb|ADP86405.1| Farnesyltranstransferase [Desulfovibrio vulgaris RCH1] Length = 299 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 115/225 (51%), Gaps = 15/225 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y + +GGKRLRP+L L+TA M + + A AIE IHT +L+HDD+ L Sbjct: 38 AMEYSLLAGGKRLRPVLCLSTAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPAMDDDDL 97 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT-----LA 141 RRG+ + + T++L GD LL+ AF ++ + L AL V+ + Sbjct: 98 RRGRPSNHRQFDEATAILAGDGLLTDAFDLMASVGGGIPAGHVLAALREVSSAAGSSGMV 157 Query: 142 EGELRQLSLSK--NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ + + ++D+ +H +K T L + +L+ G S + + YG Sbjct: 158 GGQALDMDYTGRDDIDLAALRTMHAMK--TGALIRCSCVAGALLGGAPASAVEQVAGYGA 215 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G AFQ+VDD+LD G+ ++GK +G D GK T P +L +R Sbjct: 216 AIGAAFQIVDDILDETGDEAQLGKPVGSDVEQGKVTYPSLLGIER 260 >gi|306822517|ref|ZP_07455895.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium dentium ATCC 27679] gi|304554062|gb|EFM41971.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium dentium ATCC 27679] Length = 391 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 115/222 (51%), Gaps = 26/222 (11%) Query: 41 GGKRLRPMLTLAT-----ALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRGK 94 GGKRLR +LTL + A + + VL LACA+E TA L+HDD++DDS LRRG+ Sbjct: 83 GGKRLRALLTLDSFRAFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGR 142 Query: 95 VAARLVWGNQT---------SVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVACTL 140 +A + T +++GD L + + + ++S + + A + + Sbjct: 143 PSAHRALASGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREV 202 Query: 141 AEGELRQLSLSKN-LDVTEE---DYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQALK 195 G++ L++ N LD EE L+V + KTA + A L+ L AG+ S + L Sbjct: 203 EIGQVLDLAVELNPLDDPEELVRASLNVFRWKTASYTTIAPLKFGMLAAGLDASAARDLA 262 Query: 196 -SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 S G+ LG+AFQL DD+LD G GK +G D R GK T+ Sbjct: 263 MSIGLPLGLAFQLADDLLDVIGSSLNTGKPVGGDIREGKRTV 304 >gi|223888948|ref|ZP_03623539.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 64b] gi|224533104|ref|ZP_03673704.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi WI91-23] gi|226320615|ref|ZP_03796175.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 29805] gi|223885764|gb|EEF56863.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 64b] gi|224511831|gb|EEF82232.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi WI91-23] gi|226234034|gb|EEH32755.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 29805] Length = 347 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 26/219 (11%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GGKR+RPM+ + A L + N L L+ +E H+ +L+ DD+ D+S RRG A Sbjct: 57 GGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIEDNSLKRRGASAI 116 Query: 98 RLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 L++G S+ G+ + L K + L TL+ L L + +D Sbjct: 117 HLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLS-----NLHLGQGID 171 Query: 156 V---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG--MNLGIA 204 + + ++Y+ +++ KTA LF A S L A + N+ +A K Y + LG+ Sbjct: 172 IKFHNESYIPSIKEYISLVELKTASLFGMA---SFLAAILTNNEDKAKKIYSTFLKLGVY 228 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 FQ++DD+ + + ++N GK G+D GK +LP+I Q Sbjct: 229 FQIIDDIKNIKNKIN--GKEFGDDLLEGKKSLPIIYFLQ 265 >gi|46579760|ref|YP_010568.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str. Hildenborough] gi|46449175|gb|AAS95827.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str. Hildenborough] Length = 287 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 115/225 (51%), Gaps = 15/225 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y + +GGKRLRP+L L+TA M + + A AIE IHT +L+HDD+ L Sbjct: 26 AMEYSLLAGGKRLRPVLCLSTAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPAMDDDDL 85 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEALEALSLVACT-----LA 141 RRG+ + + T++L GD LL+ AF ++ + L AL V+ + Sbjct: 86 RRGRPSNHRQFDEATAILAGDGLLTDAFDLMASVGGGIPAGHVLAALREVSSAAGSSGMV 145 Query: 142 EGELRQLSLSK--NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ + + ++D+ +H +K T L + +L+ G S + + YG Sbjct: 146 GGQALDMDYTGRDDIDLAALRTMHAMK--TGALIRCSCVAGALLGGAPASAVEQVAGYGA 203 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G AFQ+VDD+LD G+ ++GK +G D GK T P +L +R Sbjct: 204 AIGAAFQIVDDILDETGDEAQLGKPVGSDVEQGKVTYPSLLGIER 248 >gi|308388535|gb|ADO30855.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha710] Length = 127 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 82/135 (60%), Gaps = 14/135 (10%) Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 +K YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I ++G+++ Sbjct: 1 MKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQ----- 55 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ--KAKD----SLRCLPDSSWK 307 ND + ++EN +++ + + +V ++ AYS G+ KA D +L LPDS K Sbjct: 56 --VANDVRTALENADRSY-FEKIHDYVVRSDALAYSIGEARKAVDCAVTALDALPDSEVK 112 Query: 308 KSLMEVVDFCLQRLN 322 +++++ L R++ Sbjct: 113 DAMIQLAKESLVRVS 127 >gi|315658203|ref|ZP_07911075.1| geranyltranstransferase [Staphylococcus lugdunensis M23590] gi|315496532|gb|EFU84855.1| geranyltranstransferase [Staphylococcus lugdunensis M23590] Length = 293 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 118/219 (53%), Gaps = 13/219 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y I +GGKR+RP+L L T ML + A A+E IHT +L+HDD+ R Sbjct: 34 MQYSINAGGKRVRPLLLLLTLDMLNKDYQLGLATAAALEMIHTYSLIHDDLPAMDDDDYR 93 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVACTLAEGELRQL-- 148 RGK+ V+G +VL GD LL++AF ++ +T+ ++ + A G L + Sbjct: 94 RGKLTNHKVFGEWKAVLAGDALLTKAFDVISNDTQLDNDIKVKLIQRLAFASGHLGMVGG 153 Query: 149 ------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 S ++ +D++ + +H ++KT L + A+ ++ IA V V + L + +LG Sbjct: 154 QALDMQSETQAVDISTLEQIH--RAKTGALLTFAVMAATDIAQVNEHVAEHLNLFSQHLG 211 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + FQ+ DD+LD GE +++GK IG D N K T +L Sbjct: 212 LMFQIKDDLLDVYGEESKLGKKIGSDIDNHKSTYVSLLG 250 >gi|15611931|ref|NP_223582.1| geranyltranstransferase [Helicobacter pylori J99] gi|4155442|gb|AAD06447.1| GERANYLTRANSTRANSFERASE [Helicobacter pylori J99] Length = 303 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 140/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 LRR + T+VL+GD L + +F E S LE+ + LV A G + Sbjct: 101 ILRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESRIIVELVKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+ + + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLIMGLVASGINDEELLKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D + K + +L ++ + + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLD--SAKNSFVNLLGLKKASGYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + L+ ++ ++EN AL++T ++ Sbjct: 273 ILND----LNALEPTYLSLQENLNALLNTLFKG 301 >gi|322434675|ref|YP_004216887.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9] gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9] Length = 320 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 48/267 (17%) Query: 20 LKRICSDVEMIPDVV----KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE--- 72 L+R+ + +P + ++ F+GGKRLRP+L L A M+ L A+E Sbjct: 22 LERLLPAPDTLPHSIHRAMRHSTFAGGKRLRPILALEAARMVSGG-----TLTPALETAA 76 Query: 73 --------FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 IHT +L+HDD+ +D+ LRRG+ +V+G T++L GD L + AF + Sbjct: 77 AELGAALEMIHTYSLIHDDLPALDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQTIA 136 Query: 123 ETKSQEAL------EALSLVACTLAE-GELRQLSL-------------SKNLDVTEEDYL 162 + A E + VA + G+L SL S+ + T E Sbjct: 137 NLHAPAATVVSILREVSAAVATGVGSVGDL-HTSLPPGMIGGQVMDIESEGVKPTAELVE 195 Query: 163 HVIKSKTAVLFSAALEVSSLIA-GVQNSVRQ----ALKSYGMNLGIAFQLVDDVLDYRGE 217 + ++KT L + ++ L+ G Q S L+++G G+AFQ+VDDVLD + Sbjct: 196 AIHRAKTGALITVSVVAGGLLGLGDQPSTTHDTIARLRTFGQKAGLAFQIVDDVLDMTQD 255 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQR 244 ++GK G+D K T P + + Sbjct: 256 SAQLGKTAGKDTATDKATWPAVFGIPQ 282 >gi|283850298|ref|ZP_06367587.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B] gi|283574324|gb|EFC22295.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B] Length = 299 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 104/221 (47%), Gaps = 11/221 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y + +GGKRLRP L L+ A + + A E IHT +L+HDD+ L Sbjct: 38 AMEYSLLAGGKRLRPALCLSFAELFGAARARAMPFAAGFEIIHTYSLIHDDLPAMDDDDL 97 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG+ + V+G ++L GD LL++AF CM A L +A + Sbjct: 98 RRGRPSNHKVFGEAAAILAGDGLLTEAFGCMGRAWPGIAADLVLPALAEAARAAGAAGMG 157 Query: 150 LSKNLD--------VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + LD VT + + KT L +A+ +++AG + YG + Sbjct: 158 GGQALDMDYTARQGVTLAELARMQALKTGALITASCVCGAILAGAGEEGVARAREYGEAV 217 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G AFQ+VDD+LD G+ +GK +G D GK T P ++ Sbjct: 218 GAAFQIVDDILDEIGDAATLGKPVGSDREQGKNTYPSMVGL 258 >gi|258405879|ref|YP_003198621.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692] gi|257798106|gb|ACV69043.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692] Length = 292 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 116/240 (48%), Gaps = 25/240 (10%) Query: 24 CSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTA 77 C D +P + ++Y + +GGKR+RP+L L A +L GD +L A +E IHT Sbjct: 20 CLDARRMPATLYESMRYSLLAGGKRVRPVLCLVWAELLG--GDRQAVLPFASGLECIHTY 77 Query: 78 TLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 +L+HDD+ LRRGK + +G ++L GD LL+ AF +++ L A L Sbjct: 78 SLVHDDLPAMDDDDLRRGKPSNHKQFGEAMAILAGDGLLTHAFELMLHAD----LPAERL 133 Query: 136 V-----------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 V A + G++ + L+ + ED + KT L A +++A Sbjct: 134 VRAAGLVAGAAGASGMIGGQVTDIQLTGSGATNVEDLRAMHGMKTGALLQVACTSGAVLA 193 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G Q +YG LG+AFQ+ DD+LD G+ +GK +G D K T P ++ + Sbjct: 194 GAIEEDIQRAATYGGALGLAFQVADDILDVVGDEAALGKPVGSDQGADKVTYPALMGLDK 253 >gi|315646907|ref|ZP_07900022.1| Polyprenyl synthetase [Paenibacillus vortex V453] gi|315277837|gb|EFU41161.1| Polyprenyl synthetase [Paenibacillus vortex V453] Length = 794 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 116/231 (50%), Gaps = 19/231 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC--AIEFIHTATLLHDDVV--DD 87 D Y + GKRLRP+LT + EY + ++ ++E++HTA+L+ DD+ D+ Sbjct: 536 DTANYTLEGDGKRLRPILTWVMGVN-EYGLEPSAIVPLLRSLEYMHTASLIFDDLPSQDN 594 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV---------AC 138 ++ RRG+ V + T+ + G +L+ +A + E S +A S+V A Sbjct: 595 ASTRRGRPTLHQVHNSATAEITGLYLIQKA---IEEQSSLVGFDASSVVSLIQYSSKRAG 651 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + G+ L SK +T E + KT + F A+L + +++A V + LK + Sbjct: 652 EMCMGQAMDLD-SKGKKLTLEQLNMICFYKTGIAFEASLVMPAILAQVNEAEIALLKKFA 710 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + GIAFQ+ DD+LD +G++ +GK G+D N IL Q G +E Sbjct: 711 YHAGIAFQIKDDLLDVQGDLERLGKPTGQDAENNTSNFVTILG-QEGASQE 760 >gi|313114145|ref|ZP_07799697.1| putative geranyltranstransferase [Faecalibacterium cf. prausnitzii KLE1255] gi|310623554|gb|EFQ06957.1| putative geranyltranstransferase [Faecalibacterium cf. prausnitzii KLE1255] Length = 293 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 115/236 (48%), Gaps = 10/236 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +Y + GGKR+R +L L+ ML A A+E +H +L+HDD+ +D+ L Sbjct: 35 AARYSLMGGGKRIRAVLVLSVCDMLGGSMQAAQQFAAAVEMLHCYSLIHDDLPCMDNDDL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG+ + + T++L GD LL++AF V + ++ + A R + Sbjct: 95 RRGRPSCHKAFSEATAMLAGDVLLTEAFETVANAPADASV-CVQAARALGAGAGSRGMVY 153 Query: 151 SKNLDV------TEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + LD+ ED L +I ++KT L +AA+++ + A + + L+ Y LG+ Sbjct: 154 GQELDLKYEALAATEDQLRLIHRNKTGALINAAIQMGAAAAKADEAQCRVLEQYAYGLGL 213 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 FQ+VDDVLD ++GK IG D NGK T + + K + + T + Sbjct: 214 VFQIVDDVLDVTSTPEQLGKPIGSDSENGKTTFVTLYGAEGAMKLAHDLNQETCTE 269 >gi|193084129|gb|ACF09795.1| octaprenyl-diphosphate synthase [uncultured marine group III euryarchaeote SAT1000-53-B3] Length = 325 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 100/199 (50%), Gaps = 11/199 (5%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLAC--AIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GK+LRP+L + L GD H+ C A+E IH TL+HDD +D RR A Sbjct: 54 GKQLRPVLCRLVSDSL--GGDAHLAFECGMALELIHCGTLIHDDWLDGDKFRREAPALWK 111 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 G +T+VLV D ++ A + S ++L+ A L EG + + +N +E Sbjct: 112 ELGPRTAVLVADLMI--ATGSLHGAISLATGKSLARCARNLTEGAIADFTDKEN--YSES 167 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 YLH IK KT L+S A E+ +LI+ + + + +G +GI +Q+ DD LD + Sbjct: 168 VYLHRIKKKTGALYSTAAELGALIS-PRTDLALPMHKFGETVGIIYQITDDYLDLMNSL- 225 Query: 220 EMGKNIGEDFRNGKPTLPV 238 + K D G PTLPV Sbjct: 226 -ITKTPVGDLALGIPTLPV 243 >gi|148274072|ref|YP_001223633.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147832002|emb|CAN02974.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 340 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 31/225 (13%) Query: 40 SGGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 +GGKR RP + +A L + + HV A E +HTA ++HDDV+D RRG Sbjct: 35 AGGKRFRPRMVMAAYDGLGGQDVQAAAHV--GAAFEMLHTALIVHDDVIDRDFTRRGGPN 92 Query: 97 ARLVW-----------------GNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALS 134 + G +V+ GD L A+ ++ + ++ +E L Sbjct: 93 VSGAYRDIATTQGLPQPLAEHRGMSAAVIAGDLALVNAYRLIDASGVRDLTRSHLMEILD 152 Query: 135 LVACTLAEGELRQLSLSKNLDVTEED-YLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQ 192 A GEL + S DV D L + + KTAV F A L+ +++AG ++ Sbjct: 153 DAVFASAAGELIDVEFSLTADVPSVDEILRMERLKTAVYSFEAPLQAGAVLAGASPAIVS 212 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK-NIGEDFRNGKPTL 236 AL +G ++GIA+Q+VDDVL G+ E GK N+G D R GK T+ Sbjct: 213 ALGDFGRDIGIAYQVVDDVLGVFGDEQETGKTNLG-DLREGKRTV 256 >gi|310287739|ref|YP_003938997.1| Polyprenyl synthetase [Bifidobacterium bifidum S17] gi|311064626|ref|YP_003971351.1| polyprenyl synthase IdsA [Bifidobacterium bifidum PRL2010] gi|309251675|gb|ADO53423.1| Polyprenyl synthetase [Bifidobacterium bifidum S17] gi|310866945|gb|ADP36314.1| IdsA Polyprenyl synthase [Bifidobacterium bifidum PRL2010] Length = 365 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 84/243 (34%), Positives = 117/243 (48%), Gaps = 33/243 (13%) Query: 41 GGKRLRPMLTL----ATALM------LEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSA 89 GGKRLR +L L AT RG + VL LACAIE TA L+HDD++DDS Sbjct: 51 GGKRLRALLALHAFDATDPQGHDDDDAHARGRDAVLDLACAIEVFQTAALVHDDIIDDSD 110 Query: 90 LRRGKVAARLVWGNQT---------SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 LRRGK AA G + +++GD LL+ A + +Q +V+ L Sbjct: 111 LRRGKPAAHKALGTTSHSASLGRGLGIMLGD-LLATASVDIAHAAAQRMPRPDMIVSTFL 169 Query: 141 ---AEGELRQ-LSLSKNLDVTEE------DYLHVIKSKTAVLFS-AALEVSSLIAGVQNS 189 E E+ Q L L+ L +E + ++V + KTA + A LE + L +G Sbjct: 170 RMHREVEIGQVLDLAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPR 229 Query: 190 VRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 A + G+ LG AFQL DD+LD G GK +G D R GK T+ + A +R Sbjct: 230 RAHADAMAIGLPLGQAFQLADDLLDVIGSSRSTGKPVGGDIREGKRTVLLADAISGADQR 289 Query: 249 EKN 251 ++ Sbjct: 290 QRR 292 >gi|291545449|emb|CBL18557.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus sp. SR1/5] Length = 301 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 15/241 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + + Y + +GGKRLRP+L T + + A+E IHT +L+HDD+ +D+ Sbjct: 38 MAEAMNYSMTAGGKRLRPILIRETYELFGGKDKLCEPFMAAMEMIHTHSLIHDDLPALDN 97 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVA-CTLA 141 RRG++ V+G VL G LL++A+ +++ + A+ ++A T Sbjct: 98 DDYRRGRLTTHKVYGEAMGVLSGVALLNRAYEVMLSAFDLTGDKDRVIAAMRIIADKTGI 157 Query: 142 EGELRQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 G L S+ K L+ DY++ K+KT+ L A++ +++AG + ++ Sbjct: 158 NGMLGGQSVDVENDGKPLEHKMLDYIY--KNKTSALIEASMMTGAVLAGASEKELKVVEQ 215 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 N+G+AFQ+ DD+LD E+GK I D +N K T ++ R K Sbjct: 216 AAENIGLAFQIQDDILDVTSTQEELGKPIHSDEKNNKVTYVSLVGAPAAASRVKELSDHA 275 Query: 257 I 257 + Sbjct: 276 V 276 >gi|167758090|ref|ZP_02430217.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704] gi|167663987|gb|EDS08117.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704] Length = 314 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 16/227 (7%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV-- 84 +I + + Y + +GGKRLRPML T + + G++ ++ AIE IHT +L+HDD+ Sbjct: 49 IIMEAMNYSLLAGGKRLRPMLMNETYRL--FGGESPLIRPFMAAIEMIHTYSLVHDDLPA 106 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D+ RRG+ +V+G +L GD LL+ AF + E E+L + GE Sbjct: 107 MDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETAFKAFVMEPEESLLIGRALGVLGE 166 Query: 145 ---LRQLSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + + + +DV E + + + KT+ L A++ V +++ G + + Sbjct: 167 KAGIYGMIGGQVIDVKETGHSIPKEVLDTIYELKTSALIEASMMVGAILGGASEEEVKII 226 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +GIAFQ+ DD+LD +GK D +N K T ++ Sbjct: 227 EKIARYVGIAFQIQDDILDVTSTKEVLGKPTHSDEKNEKTTYVTLMG 273 >gi|332200654|gb|EGJ14726.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA41317] Length = 291 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 81/287 (28%), Positives = 136/287 (47%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALQVT 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 ++ ++ + SQ + + LSL + +L EGE + LSL E+ Sbjct: 117 SYALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L G + F T++ +E + + Sbjct: 229 KTPQKDLQAEKSTYPALL----GLEESIAFCNQTLDQANEKLEEIAQ 271 >gi|118602494|ref|YP_903709.1| farnesyl-diphosphate synthase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567433|gb|ABL02238.1| farnesyl-diphosphate synthase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 284 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 123/243 (50%), Gaps = 13/243 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y + GKR RP+L A + + +CA+EFIHT +L+HDD+ +R Sbjct: 28 IRYSTLANGKRFRPILAYCVANIFNTNLNLVDSSSCAVEFIHTYSLIHDDLPAMDDDDIR 87 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK------SQEALEALSLVACTLAEGEL 145 + +G ++L GD L + AF +++ E L++L+ + + EG+ Sbjct: 88 HNQPVCHKRFGEAQAILAGDGLQALAFEVLVNDDLISADIKIELLKSLTHASFEMVEGQA 147 Query: 146 RQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA-LKSYGMNLGI 203 LS+ +K +++ + +H + KT L S A+ + ++++ + N+ L ++ ++G+ Sbjct: 148 IDLSIIAKQVNIATLETMH--RKKTGALLSCAVNLGAIVSKMCNNKDSVILNTFSKDIGL 205 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND-GKI 262 A+Q+ DDVLD +GKN D KPT P +L + KN +K +D G + Sbjct: 206 AYQIQDDVLDIETPDALLGKNQYSDECKDKPTYPSLLGLDKSKLTYKNLYKKASDDLGLL 265 Query: 263 SVE 265 SV+ Sbjct: 266 SVD 268 >gi|195941332|ref|ZP_03086714.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi 80a] gi|216264524|ref|ZP_03436516.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 156a] gi|218249896|ref|YP_002374836.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi ZS7] gi|221217647|ref|ZP_03589115.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 72a] gi|224533848|ref|ZP_03674436.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi CA-11.2a] gi|225548998|ref|ZP_03769973.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 94a] gi|225550179|ref|ZP_03771139.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 118a] gi|226321631|ref|ZP_03797157.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi Bol26] gi|215980997|gb|EEC21804.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 156a] gi|218165084|gb|ACK75145.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi ZS7] gi|221192324|gb|EEE18543.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 72a] gi|224513141|gb|EEF83504.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi CA-11.2a] gi|225369291|gb|EEG98744.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 118a] gi|225370224|gb|EEG99662.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 94a] gi|226232820|gb|EEH31573.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi Bol26] gi|312148376|gb|ADQ31035.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi JD1] gi|312149235|gb|ADQ29306.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi N40] Length = 347 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 26/219 (11%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GGKR+RPM+ + A L + N L L+ +E H+ +L+ DD+ D+S RRG A Sbjct: 57 GGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIEDNSLKRRGASAI 116 Query: 98 RLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 L++G S+ G+ + L K + L TL+ L L + +D Sbjct: 117 HLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLS-----NLHLGQGID 171 Query: 156 V---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG--MNLGIA 204 + + ++Y+ +++ KTA LF A S L A + N+ +A K Y + LG+ Sbjct: 172 IKFHNESYIPSIKEYISLVELKTASLFGMA---SFLAAILTNNEDKAKKIYSTFLKLGVY 228 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 FQ++DD+ + + ++N GK G+D GK +LP+I Q Sbjct: 229 FQIIDDIKNIKNKIN--GKEFGDDLLEGKKSLPIIYFLQ 265 >gi|115522205|ref|YP_779116.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53] gi|115516152|gb|ABJ04136.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53] Length = 308 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 12/233 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y GGKRLRP L + +A + +L+ A+E IH +L+HDD+ +D+S Sbjct: 46 EAIRYSTLGGGKRLRPFLVVESAAVFGVPRAAALLVGAALECIHCYSLIHDDLPSMDNSD 105 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQL 148 LRRG+ + + T++L GD LL+ AF ++ + + L+ LA + + Sbjct: 106 LRRGRPTLHKAYDDATAILAGDALLTLAFDIISRDEIHPDAKVRLLLTRALARASGIGGM 165 Query: 149 SLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + LD+ E D + + KT L +L+ QAL YG Sbjct: 166 VGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRFGCIAGALLGQASPQQYQALDDYGR 225 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 LG AFQ+ DD+LD G+ +GK G D GK T L +R ++ Sbjct: 226 ALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKRRVRDL 278 >gi|309801449|ref|ZP_07695576.1| polyprenyl synthetase [Bifidobacterium dentium JCVIHMP022] gi|308221964|gb|EFO78249.1| polyprenyl synthetase [Bifidobacterium dentium JCVIHMP022] Length = 359 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 115/222 (51%), Gaps = 26/222 (11%) Query: 41 GGKRLRPMLTLAT-----ALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRGK 94 GGKRLR +LTL + A + + VL LACA+E TA L+HDD++DDS LRRG+ Sbjct: 51 GGKRLRALLTLDSFRAFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGR 110 Query: 95 VAARLVWGNQT---------SVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVACTL 140 +A + T +++GD L + + + ++S + + A + + Sbjct: 111 PSAHRALASGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREV 170 Query: 141 AEGELRQLSLSKN-LDVTEE---DYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQALK 195 G++ L++ N LD EE L+V + KTA + A L+ L AG+ S + L Sbjct: 171 EIGQVLDLAVELNPLDDPEELVRASLNVFRWKTASYTTIAPLKFGMLAAGLDASAARDLA 230 Query: 196 -SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 S G+ LG+AFQL DD+LD G GK +G D R GK T+ Sbjct: 231 MSIGLPLGLAFQLADDLLDVIGSSLNTGKPVGGDIREGKRTV 272 >gi|311087355|gb|ADP67435.1| geranyltranstransferase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 282 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 133/257 (51%), Gaps = 28/257 (10%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 +KY +FSG KRLR L +T + + +++ AIEFIH+ +L+HDD+ +D+ R Sbjct: 36 MKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDNDNFR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELR 146 RGK++ + +G TS+L GD L S AF ++ + + + ++ +S ++ ++ Sbjct: 96 RGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGSS--- 152 Query: 147 QLSLSKNLDVTEE------DYLHVIK-SKTAVLFSAALEVSSLIA-GVQNSVRQALKSYG 198 + + +NLD+ E L +I KT+ L +A+ + + S+ L + Sbjct: 153 GMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLMRSAVRLVYFSSNNFSKSILSILDLFS 212 Query: 199 MNLGIAFQLVDDVLDYRGE-VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +++G+AFQ+ DD+LD++ + V K I + K T P+I+ K+ K K + Sbjct: 213 ISIGLAFQIQDDILDFKKDSVKTDNKKIIK-----KHTYPLIIGLDESRKKIKQLHKKSF 267 Query: 258 NDGKISVENLKKAFIIM 274 +++ +LKK I+ Sbjct: 268 ----LALNSLKKKISIL 280 >gi|149008192|ref|ZP_01831697.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74] gi|225858990|ref|YP_002740500.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae 70585] gi|307127203|ref|YP_003879234.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B] gi|147760373|gb|EDK67353.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74] gi|225720031|gb|ACO15885.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae 70585] gi|306484265|gb|ADM91134.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B] gi|332074540|gb|EGI85014.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA17545] Length = 291 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 31/254 (12%) Query: 34 VKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL- 90 V Y I +GGKR+RP L L AL + + H +A A+E IHT +L+HDD+ Sbjct: 31 VLYSIHAGGKRIRPFLLLEVLEALQVTIK-PAHAQVATALEMIHTGSLIHDDLPAMDDDD 89 Query: 91 -RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ---EALEALSLVACTLA--- 141 RRG++ +G ++L GD L ++ ++ + SQ + + LSL + +L Sbjct: 90 YRRGRLTNHKKFGEAMAILAGDALFLDSYALIAQADLPSQIKVDLIANLSLASGSLGMVA 149 Query: 142 ------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 EGE + LSL E+ + +KT L + + +++IA + ++ LK Sbjct: 150 GQVLDMEGEHQHLSL--------EELQTIHANKTGKLLAYPFQAAAIIAELSPEMQVKLK 201 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + G +G+AFQ+ DDVLD E+GK +D + K T P +L G + F Sbjct: 202 TVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALL----GLEESIAFCNQ 257 Query: 256 TINDGKISVENLKK 269 T++ +E + + Sbjct: 258 TLDQANEKLEEIAQ 271 >gi|306825094|ref|ZP_07458436.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432530|gb|EFM35504.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 291 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 22/281 (7%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L +L + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---EAVLYSIHAGGKRIRPFLLLEVLESLQVV 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 R + +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IR-PAYAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLS--------LSKNLDVTEEDYLHVIKSK 168 + ++ + ++ +V +LA G L ++ ++L + E +H +K Sbjct: 117 PYALIAQADLPNQIKVDLIVNLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHA--NK 174 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 T L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+GK +D Sbjct: 175 TGKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTASFEEIGKTPQKD 234 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 + K T P +L + F T++ + +E + + Sbjct: 235 LQAEKSTYPALLGLEEAIA----FCNQTLDQAEAKLEEIAQ 271 >gi|87311122|ref|ZP_01093246.1| polyprenyl synthetase [Blastopirellula marina DSM 3645] gi|87286213|gb|EAQ78123.1| polyprenyl synthetase [Blastopirellula marina DSM 3645] Length = 616 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 26/227 (11%) Query: 41 GGKRLRPMLTLA---------------TALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 GGK RP TLA A + EY D+ A AIE H A+L+HDD+ Sbjct: 292 GGKYSRPFTTLAVYDALTGGEGTSAGGAARVGEY-SDSVKRTALAIETFHKASLVHDDIE 350 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-ALSLVAC------ 138 DD A R G V +G T++ +GD+++ + +V +Q E A ++ C Sbjct: 351 DDDAYRYGDVTIHRKYGVPTAINLGDYMIGLGYRLVSRDMAQLGGETAGRIIDCLADAHM 410 Query: 139 TLAEGELRQLSLSKNLD--VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L+EG+ +L D + D L + KT+ F AAL+ L++G + +++ Sbjct: 411 RLSEGQGAELLWRDAADKSLKPVDALKIYALKTSPAFEAALQCGVLLSGTEEDYSNSMRQ 470 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + ++G+AFQ+++D+ D+RG+ + + G D G+PT+ LA + Sbjct: 471 FARHVGVAFQILNDLKDWRGDSDNK-LSAGGDVLGGRPTVLWALALE 516 >gi|254787182|ref|YP_003074611.1| geranyltranstransferase [Teredinibacter turnerae T7901] gi|237687258|gb|ACR14522.1| geranyltranstransferase [Teredinibacter turnerae T7901] Length = 295 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 15/241 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + ++Y + +GGKR+RP L A A + + + A A+E IH +L+HDD+ +D+ Sbjct: 34 VTEAMRYSLMNGGKRIRPTLVYAAARAVSVPNEATLAGAGAVECIHAYSLIHDDLPAMDN 93 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE--- 144 LRRGK + + T++L GD L + AF + T A + LA G+ Sbjct: 94 DDLRRGKPTCHIAFDEATAILAGDGLQTLAF-EKLSTIEDPATAVAMIRTLALASGDKGM 152 Query: 145 -------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + L + ++ + +H + KT L AA+ + + Q+L Y Sbjct: 153 VAGQMIDMESEGLQQAFTISHLEKIH--RHKTGALIRAAVLMGARSVQASQEQTQSLIRY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD + +GK G D + K T +L + ++ ++ + + Sbjct: 211 ADAIGLAFQVQDDILDVISDTATLGKRQGADLEHEKATYVSLLGLREAREKARDLHATAL 270 Query: 258 N 258 + Sbjct: 271 S 271 >gi|239502342|ref|ZP_04661652.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii AB900] Length = 303 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 24/272 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA + + A A+E IH +L HDD+ Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ--------EALEA 132 +D+ LRRG+ + +G T++L GD L S AF + + + Q + ++ Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSV 190 L+ + + G++ L ++ +++++ ++ ++KT L AA+ + ++ G ++ Sbjct: 154 LATASSKMVCGQVLDLQ-AEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQAI 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ YG +G+AFQ+ DD+LD +GK G+D + K T P ++ ++ K Sbjct: 213 PK-LRQYGQAIGLAFQVQDDILDITSNTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAK 271 Query: 251 NFWKSTINDGKISVENLKK-----AFIIMREN 277 EN K+ F++ R N Sbjct: 272 ELHDQAFEALAHFGENAKELVEISQFLLARTN 303 >gi|68171692|ref|ZP_00545051.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa] gi|88657808|ref|YP_507273.1| putative geranyltranstransferase [Ehrlichia chaffeensis str. Arkansas] gi|67998884|gb|EAM85577.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa] gi|88599265|gb|ABD44734.1| putative geranyltranstransferase [Ehrlichia chaffeensis str. Arkansas] Length = 267 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 104/195 (53%), Gaps = 24/195 (12%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y +F+ GK +RP L A+A + D + ++ A+E IH +L+HDD+ +D+ +R Sbjct: 28 MRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAVEIIHVYSLIHDDLPGIDNENIR 87 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF-------------CMVIETKSQEALEALSLVAC 138 RG+ ++ + ++L GD LL+ AF C +I+ ++ AL ++ Sbjct: 88 RGQASSHKKFNEAIAILTGDALLTLAFEILSTIDESPFIRCCMIKALAK-ALGYQGMIQG 146 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + E +++K D + +HV+K TA FS A E+ ++ N AL +YG Sbjct: 147 QILDTE----TIAK--DTNDIQAIHVLK--TAQFFSVACELGGILGNASNIELNALANYG 198 Query: 199 MNLGIAFQLVDDVLD 213 +NLG AFQ+ DD+ D Sbjct: 199 LNLGHAFQVKDDIAD 213 >gi|169632576|ref|YP_001706312.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii SDF] gi|169151368|emb|CAP00088.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii] Length = 303 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 24/272 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA + + A A+E IH +L HDD+ Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ--------EALEA 132 +D+ LRRG+ + +G T++L GD L S AF + + + Q + ++ Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSV 190 L+ + + G++ L ++ +++++ ++ ++KT L AA+ + ++ G ++ Sbjct: 154 LATASSKMVCGQVLDLQ-AEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQAI 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ YG +G+AFQ+ DD+LD +GK G+D + K T P ++ ++ K Sbjct: 213 PK-LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAK 271 Query: 251 NFWKSTINDGKISVENLKK-----AFIIMREN 277 EN K+ F++ R N Sbjct: 272 ELHDQAFEALAHFGENAKELVEISQFLLARTN 303 >gi|150398316|ref|YP_001328783.1| polyprenyl synthetase [Sinorhizobium medicae WSM419] gi|150029831|gb|ABR61948.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419] Length = 304 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +++ + +GGKRLRP L TA +L + + A+E IH +L+HDD+ +D+ Sbjct: 44 EAMRHAVLNGGKRLRPFLVSETAALLGGDVQAALRIGAALECIHCYSLVHDDLPAMDNDD 103 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTLAE 142 +RRGK + + T++L GD LL+ +F ++ ++ + AL+ A Sbjct: 104 MRRGKPTVHVAFDEATAILAGDSLLTFSFDIIAAPETALSDRQKTALVLALARAAGHGGM 163 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + L L+ +E + +++S KT L A E ++IA RQ L+++G + Sbjct: 164 AGGQALDLAAEKSAPDETGIVLLQSMKTGALLRFACEAGAIIADAAAEDRQRLRAFGEKI 223 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + +GK G+D GK TL Sbjct: 224 GLAFQLADDLLDLTADAAHIGKATGKDAARGKGTL 258 >gi|15901068|ref|NP_345672.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4] gi|111657819|ref|ZP_01408536.1| hypothetical protein SpneT_02001001 [Streptococcus pneumoniae TIGR4] gi|148998635|ref|ZP_01826074.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70] gi|168577215|ref|ZP_02723024.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae MLV-016] gi|182684065|ref|YP_001835812.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14] gi|225860956|ref|YP_002742465.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae Taiwan19F-14] gi|298230892|ref|ZP_06964573.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254303|ref|ZP_06977889.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502796|ref|YP_003724736.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A] gi|303254296|ref|ZP_07340405.1| geranyltranstransferase [Streptococcus pneumoniae BS455] gi|303258839|ref|ZP_07344818.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293] gi|303261523|ref|ZP_07347470.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292] gi|303264193|ref|ZP_07350113.1| geranyltranstransferase [Streptococcus pneumoniae BS397] gi|303266176|ref|ZP_07352069.1| geranyltranstransferase [Streptococcus pneumoniae BS457] gi|303268097|ref|ZP_07353897.1| geranyltranstransferase [Streptococcus pneumoniae BS458] gi|307067855|ref|YP_003876821.1| geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae AP200] gi|14972686|gb|AAK75312.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4] gi|147755472|gb|EDK62520.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70] gi|182629399|gb|ACB90347.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14] gi|183577213|gb|EDT97741.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae MLV-016] gi|225727927|gb|ACO23778.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae Taiwan19F-14] gi|298238391|gb|ADI69522.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A] gi|301801934|emb|CBW34659.1| putative geranyltranstransferase [Streptococcus pneumoniae INV200] gi|302598790|gb|EFL65827.1| geranyltranstransferase [Streptococcus pneumoniae BS455] gi|302637103|gb|EFL67591.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292] gi|302639782|gb|EFL70238.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293] gi|302642314|gb|EFL72661.1| geranyltranstransferase [Streptococcus pneumoniae BS458] gi|302644346|gb|EFL74600.1| geranyltranstransferase [Streptococcus pneumoniae BS457] gi|302646005|gb|EFL76232.1| geranyltranstransferase [Streptococcus pneumoniae BS397] gi|306409392|gb|ADM84819.1| Geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae AP200] gi|327389445|gb|EGE87790.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA04375] Length = 291 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 31/254 (12%) Query: 34 VKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL- 90 V Y I +GGKR+RP L L AL + + H +A A+E IHT +L+HDD+ Sbjct: 31 VLYSIHAGGKRIRPFLLLEVLEALQVTIK-PAHAQVATALEMIHTGSLIHDDLPAMDDDD 89 Query: 91 -RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ---EALEALSLVACTLA--- 141 RRG++ +G ++L GD L ++ ++ + SQ + + LSL + +L Sbjct: 90 YRRGRLTNHKKFGEAMAILAGDALFLDSYALIAQADLPSQIKVDLIANLSLASGSLGMVA 149 Query: 142 ------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 EGE + LSL E+ + +KT L + + +++IA + ++ LK Sbjct: 150 GQVLDMEGEHQHLSL--------EELQTIHANKTGKLLAYPFQAAAIIAELSPEMQVKLK 201 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + G +G+AFQ+ DDVLD E+GK +D + K T P +L G + F Sbjct: 202 TVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALL----GLEESIAFCNQ 257 Query: 256 TINDGKISVENLKK 269 T++ +E + + Sbjct: 258 TLDQANEKLEEIAQ 271 >gi|269467946|gb|EEZ79681.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster bacterium] Length = 288 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 18/233 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEY---RGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 ++Y + SGGKR RP+LT A A R D+ ACA+E IH +L+HDD+ Sbjct: 32 MRYSVLSGGKRFRPILTYAVANTFSTDLNRADSS---ACAVELIHAYSLIHDDLPAMDDD 88 Query: 91 --RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA------LEALSLVACTLAE 142 R + A +G ++L GD L + AF ++ + + L+AL+ + +AE Sbjct: 89 DTRHNQPACHRKFGEAQAILTGDGLQALAFETLVNDHNISSEMRIKLLQALTHASFEMAE 148 Query: 143 GELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSYGMN 200 G+ LS+ S+ +D+ +H + KT L + ++++ +L++ N + L + + Sbjct: 149 GQSIDLSVVSQVIDIKTLKNMH--RKKTGALLNCSIKLGALLSDQCNKKDFEILDDFSAD 206 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 +G+A+Q+ DDVLD + +GK D KPT P +L + K + + Sbjct: 207 IGLAYQIQDDVLDVLTPQSILGKKQNSDVDKNKPTYPALLGLKESQKTFQKLY 259 >gi|257056769|ref|YP_003134601.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] gi|256586641|gb|ACU97774.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] Length = 361 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 93/331 (28%), Positives = 148/331 (44%), Gaps = 50/331 (15%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNH---------VLLACA-IEFIHTATLLHD 82 ++ + GGKRLRP +RG VL A A +E I L+HD Sbjct: 40 TLRDFVLGGGKRLRPTFA-----WWAWRGAGGTPDSDEAEGVLRAVASLELIQACALIHD 94 Query: 83 DVVDDSALRRGK------VAARLV---W-------GNQTSVLVGDFLLSQAFCMVIETKS 126 DV+D S RRG AAR W G +VL+GD L+ A M E Sbjct: 95 DVIDSSDSRRGSPTVHVAFAARHTRERWLGSAEAFGQAAAVLIGDLALAWAEDMFAECGL 154 Query: 127 QEALEALSLVA-----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVS 180 A A + A + G+ + D + E L V + KTA L + Sbjct: 155 PPATIAAARPAWRAMRTEVLAGQYLDVHTQATGDTSVEAALRVDRLKTAAYTVQRPLHLG 214 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + +AG + + AL +G LG+AFQL DD+L G+ + GK G+D R GK TL V L Sbjct: 215 AALAGADDELIDALLDFGGELGVAFQLRDDLLGVFGDPSVTGKPAGDDLREGKRTLLVAL 274 Query: 241 ----AFQRGTKREKNFWKSTINDGKIS---VENLKKAFIIMRENRALVDTEYRAYSYGQK 293 A ++G+ +E+ + D ++ V+++++A + + A+ + E R + + Sbjct: 275 GLDYAERQGSTKERKMIAEAVGDPDLTDAEVDDVRQALVSV---GAVAEVERRIEAMTEN 331 Query: 294 AKDSLR--CLPDSSWKKSLMEVVDFCLQRLN 322 A +LR L + + ++ L+E+ D +R + Sbjct: 332 ALAALRKASLAEPAAQR-LVELADRATRRTS 361 >gi|15903130|ref|NP_358680.1| geranyltranstransferase [Streptococcus pneumoniae R6] gi|116516004|ref|YP_816536.1| geranyltranstransferase [Streptococcus pneumoniae D39] gi|169833983|ref|YP_001694642.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae Hungary19A-6] gi|225856878|ref|YP_002738389.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae P1031] gi|15458710|gb|AAK99890.1| Farnesyl diphosphate synthase [Streptococcus pneumoniae R6] gi|116076580|gb|ABJ54300.1| geranyltranstransferase [Streptococcus pneumoniae D39] gi|168996485|gb|ACA37097.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae Hungary19A-6] gi|225724667|gb|ACO20519.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae P1031] Length = 291 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALQVA 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + ++ + SQ + + LSL + +L EGE + LSL E+ Sbjct: 117 PYALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L G + F T++ +E + + Sbjct: 229 KTPQKDLQAEKSTYPALL----GLEESIAFCNQTLDQANEKLEEIAQ 271 >gi|15606136|ref|NP_213513.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5] gi|6225572|sp|O66952|ISPA_AQUAE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|2983323|gb|AAC06913.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5] Length = 262 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 107/210 (50%), Gaps = 7/210 (3%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E + + +KY GKR+RP+ T+A A L D+ + + IE IH +L+HDD+ + Sbjct: 25 EELIEAMKYYPLQKGKRIRPLFTVAVASALGGNEDDAITVGSGIELIHNYSLIHDDLPCM 84 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAE 142 D+ RRG + +G ++L GD LL+ F ++ + ++ + L E L + + Sbjct: 85 DNDVWRRGLPTCHIKFGEAMALLAGDALLTYTFEVLSQRENYKTLSCEEILEINKIIAQK 144 Query: 143 GELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + LD+ ED V KT LF A +++A + +++ ++S G + Sbjct: 145 AGSNGMVGGQVLDIKGYEDLYEVSVKKTGALFEACFMCGAVVAKRREKLKE-MESIGRKV 203 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 G+ FQ+VDD LD G ++G+ + E+ + Sbjct: 204 GLLFQMVDDYLDKDGFYEKLGECLKEEIKK 233 >gi|313140540|ref|ZP_07802733.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium bifidum NCIMB 41171] gi|313133050|gb|EFR50667.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium bifidum NCIMB 41171] Length = 365 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 81/243 (33%), Positives = 115/243 (47%), Gaps = 33/243 (13%) Query: 41 GGKRLRPMLTLATALMLEYRG----DNHVL-------LACAIEFIHTATLLHDDVVDDSA 89 GGKRLR +L L + +G D H LACAIE TA L+HDD++DDS Sbjct: 51 GGKRLRALLALHAFDATDPQGHDDDDAHARRRDAVLDLACAIEVFQTAALVHDDIIDDSD 110 Query: 90 LRRGKVAARLVWGNQT---------SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 LRRGK AA G + +++GD LL+ A + +Q +V+ L Sbjct: 111 LRRGKPAAHKALGTTSHSASLGRGLGIMLGD-LLATASVDIAHAAAQRMPRPDMIVSTFL 169 Query: 141 ---AEGELRQ-LSLSKNLDVTEE------DYLHVIKSKTAVLFS-AALEVSSLIAGVQNS 189 E E+ Q L L+ L +E + ++V + KTA + A LE + L +G Sbjct: 170 RMHREVEIGQVLDLAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPR 229 Query: 190 VRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 A + G+ LG AFQL DD+LD G GK +G D R GK T+ + A +R Sbjct: 230 RAHADAMAIGLPLGQAFQLADDLLDVIGSSRSTGKPVGGDIREGKRTVLLADAISGADQR 289 Query: 249 EKN 251 ++ Sbjct: 290 QRR 292 >gi|186510058|ref|NP_188073.2| GGPS3 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 3); farnesyltranstransferase [Arabidopsis thaliana] gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana] Length = 360 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 74/229 (32%), Positives = 120/229 (52%), Gaps = 14/229 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT++L+HDD+ +D+ Sbjct: 93 VQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDN 152 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF---------CMVIETKSQEALEALSLVAC 138 + LRRGK V+G +VL GD LL+ AF + E + +E + Sbjct: 153 ADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFVSSGLVAPERMIRAVVELARAIGT 212 Query: 139 T-LAEGELRQLSLSK-NLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALK 195 T L G++ L+ + N D ++L I KTA L AA + ++ G + L+ Sbjct: 213 TGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLR 272 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y +G+ FQ+VDD+LD E+GK G+D GK T P ++ +R Sbjct: 273 KYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLER 321 >gi|77461227|ref|YP_350734.1| farnesyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1] gi|77385230|gb|ABA76743.1| geranyltranstransferase [Pseudomonas fluorescens Pf0-1] Length = 295 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 16/225 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L A L + + ACA+E IH +L+HDD+ Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGGKAEQANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEALSLVA--CT 139 LRRG+ + ++L GD L S AF +++ + + + AL+ A Sbjct: 93 LRRGQPTTHKKFDEACAILAGDGLQSLAFSALLDPRLSDLSADIRLQQVTALAHAAGPAG 152 Query: 140 LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSY 197 + G+ L S+ LD + +H + KT L ++++ +L +G + ++L++Y Sbjct: 153 MVGGQAIDLGSVGLKLDQKALEQMH--RHKTGALIEVSVKLGALASGCAEKDELKSLQTY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ+ DD+LD + +GK G D KPT P +L Sbjct: 211 AQAIGLAFQVQDDILDVESDTETLGKRQGADIARDKPTYPALLGL 255 >gi|227833507|ref|YP_002835214.1| putative polyprenyl diphosphate synthase [Corynebacterium aurimucosum ATCC 700975] gi|262184496|ref|ZP_06043917.1| putative polyprenyl diphosphate synthase [Corynebacterium aurimucosum ATCC 700975] gi|227454523|gb|ACP33276.1| putative polyprenyl diphosphate synthase [Corynebacterium aurimucosum ATCC 700975] Length = 363 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 118/262 (45%), Gaps = 50/262 (19%) Query: 23 ICSDVEMIPDVVKYL---IFSGGKRLRPMLTLAT---ALMLEYRGDNHVLL--ACAIEFI 74 I S + + + YL + GGKR+RP+ A A LE +L A ++EFI Sbjct: 31 IASIGAPVTNAISYLESFVLDGGKRIRPLYAWAGFIGARGLEGTESPQAMLRAATSLEFI 90 Query: 75 HTATLLHDDVVDDSALRRGK------VAARL----------VWGNQTSVLVGDFLLSQAF 118 L+HDD+VD S RRG VAAR +G ++LVGD L A Sbjct: 91 QACALIHDDIVDASDTRRGNPTVHRGVAARHRELGFHGDADFFGQSLAILVGDMALVWAE 150 Query: 119 CMVIETK-SQEAL------------EALS---LVACTLAEGELRQLSLSKNLDVTEEDYL 162 M+ ++ S EAL E + L C AEG + D T D + Sbjct: 151 DMLQDSGLSPEALARARAPWRAMRREVIGGQMLDICLEAEG---------SEDATLADSV 201 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + K+ A L + + IAG + A + YG ++G+AFQL DD+L G+ G Sbjct: 202 NRFKT-AAYTIERPLHLGAAIAGAPEKLVAAFRGYGQDIGVAFQLRDDLLGVFGDPAVTG 260 Query: 223 KNIGEDFRNGKPTLPVILAFQR 244 K G+D R GK T+ + LA QR Sbjct: 261 KPAGDDLREGKRTVLLSLALQR 282 >gi|51595290|ref|YP_069481.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 32953] gi|153948033|ref|YP_001402071.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758] gi|186894307|ref|YP_001871419.1| geranyltranstransferase [Yersinia pseudotuberculosis PB1/+] gi|51588572|emb|CAH20180.1| geranyltranstransferase (farnesyldiphosphate synthase) [Yersinia pseudotuberculosis IP 32953] gi|152959528|gb|ABS46989.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758] gi|186697333|gb|ACC87962.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+] Length = 306 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 16/240 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M N A AIE IH +L+HDD+ Sbjct: 41 EAMRYGAVIGGKRLRPYLVYATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDD 100 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG+ + +G ++L GD L + AF ++ E + + LS++ Sbjct: 101 LRRGQPTCHVKFGEAHAILAGDALQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAG 160 Query: 148 LSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS---Y 197 + + LD+ E D + + KT L AA+ + +L AG + R+ L S Y Sbjct: 161 MCAGQALDLEAETRPVLLGDLEQIHRHKTGALIRAAVRLGALAAG--EAGRKTLLSLDRY 218 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ +GK G D + GK T P +L + + ++ + Sbjct: 219 AEAIGLAFQVQDDILDVIGDTATIGKRQGSDQQLGKSTYPALLGLDCAQTKAMDLYQEAL 278 >gi|311280690|ref|YP_003942921.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] gi|308749885|gb|ADO49637.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] Length = 299 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 20/250 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMHYGALLGGKRLRPFLVYATGTMFGVSLTTLDAPAAAVECIHAYSLMHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----------LEALSLVAC 138 LRRG+ + +G ++L GD L + AF ++ + E L S VA Sbjct: 94 LRRGQPTCHVKFGEANAILAGDALQTLAFSILSDAPMPEVADRDRIAMISELAQASGVAG 153 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSY 197 L + + +D+ + +H + KT L AA+ + +L AG + + L Y Sbjct: 154 MCGGQALDLQAEGQQVDLAALERIH--RHKTGALIRAAVRLGALSAGEKGRAALPVLDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ + ++ I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARMKARDL----I 267 Query: 258 NDGKISVENL 267 D + S+ L Sbjct: 268 EDARRSLSEL 277 >gi|56708589|ref|YP_170485.1| geranyltranstransferase [Francisella tularensis subsp. tularensis SCHU S4] gi|110671060|ref|YP_667617.1| geranyltranstransferase [Francisella tularensis subsp. tularensis FSC198] gi|134301456|ref|YP_001121424.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|224457771|ref|ZP_03666244.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|254371220|ref|ZP_04987222.1| geranyltranstransferase [Francisella tularensis subsp. tularensis FSC033] gi|254875451|ref|ZP_05248161.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|56605081|emb|CAG46195.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321393|emb|CAL09578.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis FSC198] gi|134049233|gb|ABO46304.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|151569460|gb|EDN35114.1| geranyltranstransferase [Francisella tularensis subsp. tularensis FSC033] gi|254841450|gb|EET19886.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159817|gb|ADA79208.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 293 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 109/228 (47%), Gaps = 18/228 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 + Y FSGGKR+R A L N +A A+E IHT +L+HDD+ +D+ LR Sbjct: 32 MHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKIAFAVESIHTYSLIHDDLPAMDNDTLR 91 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCM--------VIETKSQEALEALSLVACTLAEG 143 RGK + + T++L GD L + AF + + + K L A A + G Sbjct: 92 RGKPTCHIKFNEATAILAGDALQALAFEILQDINYSDIDKLKKINKLFAQYCGASGMVGG 151 Query: 144 ELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGM 199 + QL + +K L + E LH +KTA +F A + + +++ QNS + L Sbjct: 152 Q--QLDIEGENKKLKIEELQILHT--NKTAKMFRACIVLPYILSQNQNSQIEDLLVRLSD 207 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +G+ FQ+ DD+LD NE+GK +D K T ++ + K Sbjct: 208 LIGLCFQIKDDILDVTKTTNELGKTSAKDIDANKSTYVSLMGLKDANK 255 >gi|289550707|ref|YP_003471611.1| Geranyltranstransferase (farnesyldiphosphate synthase) [Staphylococcus lugdunensis HKU09-01] gi|289180239|gb|ADC87484.1| Geranyltranstransferase (farnesyldiphosphate synthase) [Staphylococcus lugdunensis HKU09-01] Length = 260 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 118/219 (53%), Gaps = 13/219 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y I +GGKR+RP+L L T ML + A A+E IHT +L+HDD+ R Sbjct: 1 MQYSINAGGKRVRPLLLLLTLDMLNKDYQLGLATAAALEMIHTYSLIHDDLPAMDDDDYR 60 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVACTLAEGELRQL-- 148 RGK+ V+G +VL GD LL++AF ++ +T+ ++ + A G L + Sbjct: 61 RGKLTNHKVFGEWKAVLAGDALLTKAFDVISNDTQLDNDIKVKLIQRLAFASGHLGMVGG 120 Query: 149 ------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 S ++ +D++ + +H ++KT L + A+ ++ IA V V + L + +LG Sbjct: 121 QALDMQSETQAVDISTLEQIH--RAKTGALLTFAVMAATDIAQVNEHVAEHLNLFSQHLG 178 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + FQ+ DD+LD GE +++GK IG D N K T +L Sbjct: 179 LMFQIKDDLLDVYGEESKLGKKIGSDIDNHKSTYVSLLG 217 >gi|268608471|ref|ZP_06142198.1| Polyprenyl synthetase [Ruminococcus flavefaciens FD-1] Length = 297 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 11/224 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y + +GGKR+RP+L A L N A AIE IHT +L+HDD+ Sbjct: 37 EAMNYSLEAGGKRIRPVLVYAFCNALGGDTGNAAAPAAAIEMIHTFSLIHDDLPAMDDDD 96 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---SQEALEALSLVACTLAE---- 142 RRG+++ G ++L GD L F ++ + + ++ + +S +A + + Sbjct: 97 YRRGRLSCHKAHGEAMAILAGDALSVLPFGLIADDEKLSPEQKIRIISELARAVGKNGMI 156 Query: 143 -GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGMN 200 G++ + + DV E + ++ + KT L S + + + AG +S + +A K YG Sbjct: 157 GGQVIDMQNEQRNDVDEANLRNMYRHKTGELISVSCIMGCICAGCTDSTIIEAAKEYGYK 216 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+AFQ++DD+LD E+GK +G D K T + ++ Sbjct: 217 LGLAFQIIDDILDVTSTTEELGKPVGSDEEENKTTFVTLYGVEK 260 >gi|239907069|ref|YP_002953810.1| geranyltranstransferase [Desulfovibrio magneticus RS-1] gi|239796935|dbj|BAH75924.1| geranyltranstransferase [Desulfovibrio magneticus RS-1] Length = 299 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 11/220 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y + +GGKRLRP+L L A + + + A E IHT +L+HDD+ LR Sbjct: 39 MEYSLLAGGKRLRPVLCLVFAELFDADRARVMPFAAGFEIIHTYSLIHDDLPAMDDDDLR 98 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RG+ + V+G ++L GD LL++AF CM A L +A + Sbjct: 99 RGRPSNHKVFGEAGAILAGDALLTEAFGCMGRVWPGVAAELVLPALAEAAKAAGAAGMVG 158 Query: 151 SKNLD--------VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + LD VT + + KT L +A+ +++AG + YG +G Sbjct: 159 GQVLDMDYTAREGVTLAELARMQALKTGALLTASCVCGAILAGAGEEGVARAREYGEAVG 218 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AFQ+VDD+LD G+ +GK +G D GK T P ++ Sbjct: 219 AAFQIVDDILDEIGDAATLGKPVGSDREQGKNTYPSMIGL 258 >gi|29375563|ref|NP_814717.1| geranyltranstransferase [Enterococcus faecalis V583] gi|227555091|ref|ZP_03985138.1| geranyltranstransferase [Enterococcus faecalis HH22] gi|257418572|ref|ZP_05595566.1| polyprenyl synthetase [Enterococcus faecalis T11] gi|29343024|gb|AAO80787.1| geranyltranstransferase [Enterococcus faecalis V583] gi|227175759|gb|EEI56731.1| geranyltranstransferase [Enterococcus faecalis HH22] gi|257160400|gb|EEU90360.1| polyprenyl synthetase [Enterococcus faecalis T11] gi|315168053|gb|EFU12070.1| geranyltranstransferase [Enterococcus faecalis TX1341] Length = 293 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 13/253 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + LRRGK V+G T++L GD LL+ AF ++ ++ + + L + A Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKA 143 Query: 142 EGELRQLS------LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G +S + + +T E+ V + KT L AL ++A V L Sbjct: 144 AGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + + G+AFQ+ DD+LD ++GK +G D K T P +L G K+ Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGAKDALTH 259 Query: 256 TINDGKISVENLK 268 + +G +E +K Sbjct: 260 QLAEGSAVLEKIK 272 >gi|302876186|ref|YP_003844819.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] gi|307686918|ref|ZP_07629364.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] gi|302579043|gb|ADL53055.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] Length = 795 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 12/230 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--RGDNHVLLACAIEFIHTATLLHDDVV 85 + I + Y + GKRLRP++ + EY + + L ++E++HTA+L+ DD+ Sbjct: 533 DFISNAANYSLRGDGKRLRPIMAWVMGVK-EYGLKESEMLPLLRSLEYMHTASLIFDDLP 591 Query: 86 --DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV------A 137 D++ +RRG+ V+ + L G FL +A + + L L+ Sbjct: 592 AQDNADIRRGRPTVHKVYNVAIAELTGLFLTQKAIEEQTFLQQFDLRNVLKLIRYSTETT 651 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L +G+ L +K +T E + KT F AAL + +++A +ALK + Sbjct: 652 ADLCKGQTMDLE-AKGKQLTLEQLNMMCFYKTGKGFEAALMMPAILAARDQVEMEALKKF 710 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + GIAFQ+ DD+LD GEV GKNIG+D N T IL + K Sbjct: 711 SYHAGIAFQIKDDLLDVEGEVRLTGKNIGKDAENNSSTFVSILGLEEAKK 760 >gi|148989224|ref|ZP_01820604.1| GTP-binding protein LepA [Streptococcus pneumoniae SP6-BS73] gi|147925202|gb|EDK76281.1| GTP-binding protein LepA [Streptococcus pneumoniae SP6-BS73] Length = 291 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALQVT 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + ++ + SQ + + LSL + +L EGE + LSL E+ Sbjct: 117 PYALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L G + F T++ +E + + Sbjct: 229 KTPQKDLQAEKSTYPALL----GLEESIAFCNQTLDQANEKLEEIAQ 271 >gi|315173304|gb|EFU17321.1| geranyltranstransferase [Enterococcus faecalis TX1346] Length = 293 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 122/259 (47%), Gaps = 25/259 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC------------MVIETKSQEA 129 + LRRGK V+G T++L GD LL+ AF +++ + +A Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKA 143 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +VA + + E ++SL T E+ V + KT L AL ++A Sbjct: 144 AGNQGMVAGQMGDIEGEKVSL------TLEELAAVHEKKTGALIEFALIAGGVLANQTEE 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L + + G+AFQ+ DD+LD ++GK IG D K T P +L G Sbjct: 198 VIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKIGRDEALNKSTYPALL----GIAGA 253 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + +G +E +K Sbjct: 254 KDALTHQLAEGSAVLEKIK 272 >gi|67906634|gb|AAY82729.1| predicted geranyltranstransferase [uncultured bacterium eBACmed86H08] Length = 287 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 13/192 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y +F GGK++R + + + + + + A+E IH +L+HDD+ +D+ LRRG Sbjct: 34 YGLFPGGKKIRSKIIIDVGKIFSVPYHHLIRVGAAVECIHAYSLIHDDLPCMDNDDLRRG 93 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCM-------VIETKSQEALEALSLVACTL--AEGE 144 K++ +G T+VL G+ LL+ AF + + ETK + + +LS + L A G+ Sbjct: 94 KLSTHKKFGESTAVLAGNSLLTLAFEILSEKNFKINETKKNKLINSLSNTSGHLGIAGGQ 153 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L+ K V+++ + + +KT LFS + +IA + Q K G+++G+ Sbjct: 154 YLDLNFEKK-RVSKKKIIDMQLNKTGKLFSFSTIAPLIIANKSAKINQ-FKRIGLDIGLL 211 Query: 205 FQLVDDVLDYRG 216 FQ+VDD LDY G Sbjct: 212 FQIVDDFLDYSG 223 >gi|226942935|ref|YP_002798008.1| geranyltranstransferase [Azotobacter vinelandii DJ] gi|226944165|ref|YP_002799238.1| geranyltranstransferase [Azotobacter vinelandii DJ] gi|226717862|gb|ACO77033.1| geranyltranstransferase [Azotobacter vinelandii DJ] gi|226719092|gb|ACO78263.1| geranyltranstransferase [Azotobacter vinelandii DJ] Length = 295 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 16/239 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+ ++++ + ++Y + +GGKR+RP+L A L + ACA+E IH + Sbjct: 20 LLQPPRAELQRLYQAMRYSVVNGGKRVRPLLVYAACEALGGTPERAEGAACAVELIHAYS 79 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL- 135 L+HDD+ LRRG+ + ++L GD L + AF ++ + + L L Sbjct: 80 LVHDDLPAMDDDDLRRGQPTTHRAFDEACAILAGDGLQALAFEVLTDPRRNPRDAGLRLE 139 Query: 136 VACTLAE---------GELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++ TLA G+ L ++ + LD + +H + KT L A++ + +L +G Sbjct: 140 MSRTLARAAGPAGMVGGQAIDLEAVGRRLDRDALETMH--RHKTGALIEASVRLGALASG 197 Query: 186 VQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + AL Y +G+AFQ+ DD+LD + +GK G+D N KPT P +L + Sbjct: 198 RADETDLAALAVYARAIGLAFQVQDDILDVESDTATLGKTQGKDQANDKPTYPALLGLE 256 >gi|149012256|ref|ZP_01833325.1| GTP-binding protein LepA [Streptococcus pneumoniae SP19-BS75] gi|149019197|ref|ZP_01834559.1| GTP-binding protein LepA [Streptococcus pneumoniae SP23-BS72] gi|168486528|ref|ZP_02711036.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC1087-00] gi|168491126|ref|ZP_02715269.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC0288-04] gi|147763582|gb|EDK70517.1| GTP-binding protein LepA [Streptococcus pneumoniae SP19-BS75] gi|147931067|gb|EDK82046.1| GTP-binding protein LepA [Streptococcus pneumoniae SP23-BS72] gi|183570476|gb|EDT91004.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC1087-00] gi|183574440|gb|EDT94968.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC0288-04] Length = 291 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALQVA 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + ++ + SQ + + LSL + +L EGE + LSL E+ Sbjct: 117 PYALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L G + F T++ +E + + Sbjct: 229 KTPQKDLQAEKSTYPALL----GLEESIAFCNQTLDQANEKLEEIAQ 271 >gi|242278215|ref|YP_002990344.1| polyprenyl synthetase [Desulfovibrio salexigens DSM 2638] gi|242121109|gb|ACS78805.1| Polyprenyl synthetase [Desulfovibrio salexigens DSM 2638] Length = 296 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 130/233 (55%), Gaps = 16/233 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y + +GGKRLRP+L L A ML + + + A ++E IHT +L+HDD+ LR Sbjct: 35 MEYSLMAGGKRLRPVLVLVWAQMLGVKKEAVMPFAASLEMIHTYSLIHDDLPAMDDDDLR 94 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVACT-----LAEGE 144 RGK + + T++L GD LL++AF + + ++ +EA+SL+A + + G+ Sbjct: 95 RGKPSNHKKFDEATAILAGDGLLTEAFGFMAKADAPAEYVVEAISLMAKSAGSPGMVGGQ 154 Query: 145 LRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIA----GVQNSVRQALKSYGM 199 + +S + VT D L V+ S KT L +A + +++A ++ VR+A + YG Sbjct: 155 VVDMSYTGRDGVTL-DELKVMHSMKTGALILSACKSGAILAKGAGASEDDVRRA-EEYGR 212 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +G+AFQ+VDDVLD G+ +GK +G D GK T P ++ + + + Sbjct: 213 LIGVAFQIVDDVLDVVGDEATLGKPVGSDIEQGKSTYPSLIGLDESKELARKY 265 >gi|149002571|ref|ZP_01827503.1| GTP-binding protein LepA [Streptococcus pneumoniae SP14-BS69] gi|237649510|ref|ZP_04523762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CCRI 1974] gi|237822542|ref|ZP_04598387.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CCRI 1974M2] gi|147759182|gb|EDK66175.1| GTP-binding protein LepA [Streptococcus pneumoniae SP14-BS69] Length = 291 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALQVA 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIET--KSQ---EALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + ++ + SQ + + LSL + +L EGE + LSL E+ Sbjct: 117 PYALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELSPKMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L G + F T++ +E + + Sbjct: 229 KTPQKDLQAEKSTYPALL----GLEESIAFCNQTLDQANEKLEEIAQ 271 >gi|224283386|ref|ZP_03646708.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium bifidum NCIMB 41171] Length = 359 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 81/243 (33%), Positives = 115/243 (47%), Gaps = 33/243 (13%) Query: 41 GGKRLRPMLTLATALMLEYRG----DNHVL-------LACAIEFIHTATLLHDDVVDDSA 89 GGKRLR +L L + +G D H LACAIE TA L+HDD++DDS Sbjct: 45 GGKRLRALLALHAFDATDPQGHDDDDAHARRRDAVLDLACAIEVFQTAALVHDDIIDDSD 104 Query: 90 LRRGKVAARLVWGNQT---------SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 LRRGK AA G + +++GD LL+ A + +Q +V+ L Sbjct: 105 LRRGKPAAHKALGTTSHSASLGRGLGIMLGD-LLATASVDIAHAAAQRMPRPDMIVSTFL 163 Query: 141 ---AEGELRQ-LSLSKNLDVTEE------DYLHVIKSKTAVLFS-AALEVSSLIAGVQNS 189 E E+ Q L L+ L +E + ++V + KTA + A LE + L +G Sbjct: 164 RMHREVEIGQVLDLAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPR 223 Query: 190 VRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 A + G+ LG AFQL DD+LD G GK +G D R GK T+ + A +R Sbjct: 224 RAHADAMAIGLPLGQAFQLADDLLDVIGSSRSTGKPVGGDIREGKRTVLLADAISGADQR 283 Query: 249 EKN 251 ++ Sbjct: 284 QRR 286 >gi|146278076|ref|YP_001168235.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145556317|gb|ABP70930.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025] Length = 288 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 14/230 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--DDSA 89 Y + GG R+RP L L+ A GD+ L A A+E IH A+L+HDD+ DD+ Sbjct: 33 YAVTPGGARIRPTLLLSVATAC---GDDRPALSDAAAVALELIHCASLVHDDLPCFDDAE 89 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-ACTLAEGELRQL 148 +RRGK + ++L GD L+ F ++ + AL LV A + G + Sbjct: 90 IRRGKPTTHRAYSEPLAILTGDSLIVMGFEVLARAAGDQPQRALQLVTALAVRTGMPMGI 149 Query: 149 SLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + + + L ++KT LF AA ++ ++ AG + + + G +G AFQ+ Sbjct: 150 CAGQGWESESQINLSAYHRAKTGALFIAATQMGAIAAGYEA---EPWEELGARIGEAFQV 206 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 DD+ D + + +GK G+D + +P + TKR K+ I Sbjct: 207 ADDLRDALCDADTLGKPAGQDEIHHRPNAVREYGVEGATKRLKDILGGAI 256 >gi|168484957|ref|ZP_02709902.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC1873-00] gi|168493127|ref|ZP_02717270.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC3059-06] gi|221231906|ref|YP_002511058.1| geranyltranstransferase [Streptococcus pneumoniae ATCC 700669] gi|225854677|ref|YP_002736189.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae JJA] gi|172041911|gb|EDT49957.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC1873-00] gi|183576658|gb|EDT97186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC3059-06] gi|220674366|emb|CAR68915.1| putative geranyltranstransferase [Streptococcus pneumoniae ATCC 700669] gi|225722931|gb|ACO18784.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae JJA] Length = 291 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 75/255 (29%), Positives = 123/255 (48%), Gaps = 33/255 (12%) Query: 34 VKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL- 90 V Y I +GGKR+RP L L AL + + H +A A+E IHT +L+HDD+ Sbjct: 31 VLYSIHAGGKRIRPFLLLEVLEALQVTIK-PAHAQVATALEMIHTGSLIHDDLPAMDDDD 89 Query: 91 -RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ---EALEALSLVACTLA--- 141 RRG++ +G ++L GD L + ++ + SQ + + LSL + +L Sbjct: 90 YRRGRLTNHKKFGEAMAILAGDALFLDPYALIAQADLPSQIKVDLIANLSLASGSLGMVA 149 Query: 142 ------EGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQAL 194 EGE + LSL + L +I + KT L + + +++IA + ++ L Sbjct: 150 GQVLDMEGEHQHLSLEE---------LQIIHANKTGKLLAYPFQAAAIIAELSPEMQVKL 200 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 K+ G +G+AFQ+ DDVLD E+GK +D + K T P +L G + F Sbjct: 201 KTVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALL----GLEESIAFCN 256 Query: 255 STINDGKISVENLKK 269 T++ +E + + Sbjct: 257 QTLDQANEKLEEIAQ 271 >gi|310943001|pdb|3P8L|A Chain A, Crystal Structure Of Polyprenyl Synthase From Enterococcus Faecalis V583 gi|310943002|pdb|3P8L|B Chain B, Crystal Structure Of Polyprenyl Synthase From Enterococcus Faecalis V583 Length = 302 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 13/253 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 33 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 92 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + LRRGK V+G T++L GD LL+ AF ++ ++ + + L + A Sbjct: 93 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKA 152 Query: 142 EGELRQLS------LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G +S + + +T E+ V + KT L AL ++A V L Sbjct: 153 AGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 212 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + + G+AFQ+ DD+LD ++GK +G D K T P +L G K+ Sbjct: 213 QFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGAKDALTH 268 Query: 256 TINDGKISVENLK 268 + +G +E +K Sbjct: 269 QLAEGSAVLEKIK 281 >gi|315162955|gb|EFU06972.1| geranyltranstransferase [Enterococcus faecalis TX0645] Length = 293 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 25/259 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I++GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIYAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC------------MVIETKSQEA 129 + LRRGK V+G T++L GD LL+ AF +++ + +A Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKA 143 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +VA + + E ++SL T E+ V + KT L AL ++A Sbjct: 144 AGNQGMVAGQMGDIEGEKVSL------TLEELAAVHEKKTGALIEFALIAGGVLANQTEE 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L + + G+AFQ+ DD+LD ++GK +G D K T P +L G Sbjct: 198 VIGLLTLFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGA 253 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + +G +E +K Sbjct: 254 KDALTHQLAEGSAVLEKIK 272 >gi|219682370|ref|YP_002468754.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219622103|gb|ACL30259.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086767|gb|ADP66848.1| geranyltranstransferase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 282 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 132/256 (51%), Gaps = 28/256 (10%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 +KY +FSG KRLR L +T + + +++ AIEFIH+ +L+HDD+ +D+ R Sbjct: 36 MKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDNDNFR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELR 146 RGK++ + +G TS+L GD L S AF ++ + + + ++ +S ++ ++ Sbjct: 96 RGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGSS--- 152 Query: 147 QLSLSKNLDVTEE------DYLHVIK-SKTAVLFSAALEVSSLIA-GVQNSVRQALKSYG 198 + + +NLD+ E L +I KT+ L +A+ + + S+ L + Sbjct: 153 GMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLMRSAVRLVYFSSNNFSKSILSILDLFS 212 Query: 199 MNLGIAFQLVDDVLDYRGE-VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +++G+AFQ+ DD+LD++ + V K I + K T P+I+ K+ K K + Sbjct: 213 ISIGLAFQIQDDILDFKKDSVKTDNKKIIK-----KHTYPLIIGLDESRKKIKQLHKKSF 267 Query: 258 NDGKISVENLKKAFII 273 +++ +LKK I Sbjct: 268 ----LALNSLKKKISI 279 >gi|39933601|ref|NP_945877.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009] gi|39647447|emb|CAE25968.1| putative geranyltranstransferase (farnesyl-diphosphate synthase) [Rhodopseudomonas palustris CGA009] Length = 308 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 107/233 (45%), Gaps = 12/233 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y GGKRLRP L + +A + +L+ A+E IH +L+HDD+ +D+S Sbjct: 46 DAIRYSTLGGGKRLRPFLAVESAAVFGIDRAAALLVGAALECIHCYSLIHDDLPSMDNSD 105 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE-GELRQL 148 LRRG+ + + T++L GD LL+ AF +V + L+ LA L + Sbjct: 106 LRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHNDPTVRLLLTRVLARCAGLGGM 165 Query: 149 SLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + LD+ E D + + KT L +++ +AL YG Sbjct: 166 VGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQASPDQYRALDDYGR 225 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 LG AFQ+ DD+LD G+ +GK G D GK T L +R ++ Sbjct: 226 ALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKQRLRDL 278 >gi|254262303|emb|CAZ90627.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter pulveris] Length = 312 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 124/234 (52%), Gaps = 20/234 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV- 84 +++ ++ + GKR+RP+L L A L + LL ACA+E IH A+L DD+ Sbjct: 37 DLVTQAMRDATLAPGKRIRPLLMLLAARDLGCAPAHPGLLDLACAVEMIHAASLTLDDIP 96 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS------QEALEALSLVA 137 +D++A+RRG+ +G ++L LLS+AF +V + +A+ LS Sbjct: 97 CMDNAAMRRGRPTIHRKFGENVAILAAVALLSKAFGVVSSAEGLSDAGRAQAVSELSAAV 156 Query: 138 CT--LAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQAL 194 T L +G+ + L + + + +H KT VLFSA+L+++++ A + R L Sbjct: 157 GTQGLVKGQYQ--DLREGCEPRSTEAIHTTNDLKTGVLFSASLQLAAIAANASVAARNRL 214 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +S+ ++ G AFQL+DD++D + GK++ +D GK TL +L R +R Sbjct: 215 RSFALDFGQAFQLLDDLIDG---LATTGKDMNKD--AGKSTLVSVLGNDRVHQR 263 >gi|239617815|ref|YP_002941137.1| Polyprenyl synthetase [Kosmotoga olearia TBF 19.5.1] gi|239506646|gb|ACR80133.1| Polyprenyl synthetase [Kosmotoga olearia TBF 19.5.1] Length = 285 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 13/221 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 +CS I + Y +GGKRLRP L + + + ++ L A+E H+ +L+HD Sbjct: 28 VCSSFSSI---INYTPLTGGKRLRPYLIALFSQAIGLPSELYMKLGVAVELFHSGSLIHD 84 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL----- 135 D+ +D+ RRGK + + +++L GDFL+ ++ E E L+ L + Sbjct: 85 DLPAIDNDDFRRGKPSLHKAFDEASAILAGDFLMLYPVKVLQELTINEHLKFLLINEWIR 144 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 A ++ EGE ++ + + + + +H + KTA LF S I + + +K Sbjct: 145 TALSIIEGEYLDVTYEPSSNTKDVNRIHRL--KTAELFGFCFS-SPFICADRMEEAKKMK 201 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+ G FQ++DD+ D + +GK G+D + +P++ Sbjct: 202 ETGLRFGHIFQVLDDIKDKLQPIEILGKTPGKDEKLNRPSI 242 >gi|118591313|ref|ZP_01548711.1| geranyltranstransferase [Stappia aggregata IAM 12614] gi|118435985|gb|EAV42628.1| geranyltranstransferase [Stappia aggregata IAM 12614] Length = 301 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ +GGKRLRP+L + TA + D + ACA+E +H +L+HDD+ L Sbjct: 42 AMRHGALNGGKRLRPVLVMETANLFGRADDGVLQAACALELVHCYSLVHDDLPAMDDDDL 101 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL---------- 140 RRG+ + T++L GD LL+ AF ++ + EA+ A + V L Sbjct: 102 RRGQPTVHKAYDEATAILAGDALLTLAFDVI----TGEAVHADAAVRLRLSRELARASGF 157 Query: 141 ---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 A G++ L S++ + TE + + KT L A +++A + L + Sbjct: 158 GGMAGGQMLDLE-SEHRERTEAEIRQLQSMKTGALLRYACRAGAILADAPEADIDRLTRF 216 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G +G+AFQL DD+LD MGK G+D GK TL Sbjct: 217 GEVIGLAFQLADDLLDVEASAETMGKATGKDAEAGKATL 255 >gi|62391012|ref|YP_226414.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] gi|41326351|emb|CAF20513.1| PUTATIVE GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Corynebacterium glutamicum ATCC 13032] Length = 366 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 80/250 (32%), Positives = 119/250 (47%), Gaps = 31/250 (12%) Query: 30 IPDVVKYL---IFSGGKRLRPMLTLATALMLEYRGDNHVLL------ACAIEFIHTATLL 80 + D V +L + +GGKR+RP+ A L + ++ L A ++EFI L+ Sbjct: 40 VTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALI 99 Query: 81 HDDVVDDSALRRG-KVAARLV---------------WGNQTSVLVGDFLLSQAFCMVIET 124 HDD++D S RRG R V +G S+L GD L A M+ ++ Sbjct: 100 HDDIIDSSDTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDMLQDS 159 Query: 125 K-SQEAL----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA-ALE 178 S EAL +A + + G+L + L + + + E V + KTA A L Sbjct: 160 GLSAEALARTRDAWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLH 219 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + IAG + AL YG ++GIAFQL DD+L G+ GK G+D R GK T+ + Sbjct: 220 LGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGDPAITGKPAGDDIREGKRTVLL 279 Query: 239 ILAFQRGTKR 248 LA QR K+ Sbjct: 280 ALALQRADKQ 289 >gi|222150203|ref|YP_002551160.1| geranyltranstransferase [Agrobacterium vitis S4] gi|221737185|gb|ACM38148.1| geranyltranstransferase [Agrobacterium vitis S4] Length = 283 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 108/214 (50%), Gaps = 10/214 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L + +A + + D + + A+E +H +L+HDD+ L Sbjct: 24 AMRHAVLNGGKRLRPFLVVESARLFHGQDDAALRVGAALECLHCYSLVHDDLPAMDDDDL 83 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACTLAEG 143 RRG+ + + T++L GD LL+ AF ++ ++ + AL+ A Sbjct: 84 RRGQPTVHIAFDEATAILAGDSLLTFAFEIIASPQTTLPDAAKTALVLALARAAGLGGMA 143 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + L L+ +E + +++ KT L A E +IAG N R+ L+ +G +G Sbjct: 144 GGQALDLAAEKHAPDEVGIVTLQAMKTGALLRFACEAGPVIAGASNEDRERLRQFGELIG 203 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 AFQL DD+LD + MGK G+D GK TL Sbjct: 204 RAFQLADDLLDLTADAATMGKATGKDAGRGKGTL 237 >gi|329116734|ref|ZP_08245451.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020] gi|326907139|gb|EGE54053.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020] Length = 289 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 11/223 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDS 88 D + Y + SGGKR+RP+ L + ++H +A A+E +HT +L+HDD+ +D+ Sbjct: 27 DSIIYSVDSGGKRIRPLFLLESLEAFNITLTEDHFKVAAALEMVHTGSLIHDDLPAMDND 86 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG++ + T++L GD L F ++ ET ++ + + A G + Sbjct: 87 EYRRGRLTNHKQFDEATAILAGDSLFIDPFSLIAETNFLPQVKVDLIAQLSNAAGTFGMV 146 Query: 149 SLSKNLDVTEEDY------LHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + LD+ ED L I S KT L + +++IA + + L G + Sbjct: 147 G-GQMLDMRAEDQKLGIEELQGIHSHKTGKLLAYPFMAAAIIAQLPADMISDLTRAGELI 205 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G AFQ+ DD+LD + ++GK +D K T P +L ++ Sbjct: 206 GHAFQVRDDILDITAKFEDLGKTPNKDITAHKSTYPGLLGLEK 248 >gi|332187832|ref|ZP_08389566.1| polyprenyl synthetase family protein [Sphingomonas sp. S17] gi|332012182|gb|EGI54253.1| polyprenyl synthetase family protein [Sphingomonas sp. S17] Length = 296 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 14/228 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ GGKRLRP+L ATA + + D +A A+E IH +L+HDD+ + Sbjct: 37 AMRHAAIGGGKRLRPLLVFATARLFDVDRDCAGWVATALEAIHVYSLIHDDLPAMDDDDM 96 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--------KSQEALE-ALSLVACTLA 141 RRGK + T++L GD L + AF ++ + +S+ L+ A + +A Sbjct: 97 RRGKPTVHKAFDEATAILAGDCLHALAFEILADPSTHPDPFVRSELILDLARASGPSGMA 156 Query: 142 EGELRQLSLSKNL-DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ L + + D+ L + KT L AA+E +++ V R L+ Y + Sbjct: 157 GGQMMDLEAERQIFDLPTVTRLQ--QMKTGALICAAVEAGAILGRVPPEGRTHLRGYAHD 214 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 LG+AFQ+ DD+LD G+ GK + +D GK T +L +R ++ Sbjct: 215 LGLAFQIADDLLDAEGDEAVAGKKLRKDEDAGKATFLSLLGVERAREQ 262 >gi|329574366|gb|EGG55938.1| geranyltranstransferase [Enterococcus faecalis TX1467] Length = 286 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 25/259 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC------------MVIETKSQEA 129 + LRRGK V+G T++L GD LL+ AF +++ + +A Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKA 143 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +VA + + E ++SL T E+ V + KT L AL ++A Sbjct: 144 AGNQGMVAGQMGDIEGEKVSL------TLEELAAVHEKKTGALIEFALIAGGILANQTEE 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L + + G+AFQ+ DD+LD ++GK +G D K T P +L G Sbjct: 198 VIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGA 253 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + +G +E +K Sbjct: 254 KDALTHQLAEGSAVLEKIK 272 >gi|262371871|ref|ZP_06065150.1| geranyltranstransferase [Acinetobacter junii SH205] gi|262311896|gb|EEY92981.1| geranyltranstransferase [Acinetobacter junii SH205] Length = 303 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 132/272 (48%), Gaps = 24/272 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L A A L A A+E IH +L HDD+ Sbjct: 34 EPLKAAVHHAVMLGGKRVRPALCYAAASLQANQNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ--------EALEA 132 +D+ LRRG+ + +G T++L GD L S AF + + ++Q + ++ Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEILGSRLFDDQAQGTDAAIVLKQMQI 153 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSV 190 L+ + + G++ L ++ V +++ ++ ++KT L AA+ + ++ +G ++ Sbjct: 154 LATASSKMVCGQVLDLQ-AEGKHVAQDELENIHRNKTGALIQAAIMMGAVTIYSGTDQAI 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ +G ++G+AFQ+ DD+LD +GK G+D + K T P ++ ++ + Sbjct: 213 PK-LRQFGQSIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAQTYAQ 271 Query: 251 NFWKSTINDGKISVENLKK-----AFIIMREN 277 + EN K+ F++ R+N Sbjct: 272 TLHDQAFEALEYFGENAKELIEISKFLLDRKN 303 >gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var. chinensis] Length = 207 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 16/190 (8%) Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---- 122 CA+E IHT +L+HDD+ +D+ RRGK V+G T+VL GD LLS AF + Sbjct: 1 CAMEMIHTMSLIHDDLPRMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATS 60 Query: 123 -ETKSQEALEALSLVACTLAE-----GELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFS 174 S L +S + T+ G++ ++ N+D+ +++H+ KTAVL Sbjct: 61 KTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHI--HKTAVLLE 118 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 ++ ++ G ++ Y +G+ FQ++DD+LD E+GK G+D K Sbjct: 119 CSVVSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDVTKSSEELGKTAGKDLLTDKA 178 Query: 235 TLPVILAFQR 244 T P ++ ++ Sbjct: 179 TYPKLMGLEK 188 >gi|194396799|ref|YP_002037809.1| geranyltranstransferase [Streptococcus pneumoniae G54] gi|194356466|gb|ACF54914.1| geranyltranstransferase [Streptococcus pneumoniae G54] Length = 291 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 31/254 (12%) Query: 34 VKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL- 90 V Y I +GGKR+RP L L AL + + H +A A+E IHT +L+HDD+ Sbjct: 31 VLYSIHAGGKRIRPFLLLEVLEALQVTIK-PAHAQVATALEMIHTGSLIHDDLPAMDDDD 89 Query: 91 -RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ---EALEALSLVACTLA--- 141 RRG++ +G ++L GD L ++ ++ + SQ + + LSL + +L Sbjct: 90 YRRGRLTNHKKFGEAMAILAGDALFLDSYALIAQADLPSQIKVDLIANLSLASGSLGMVA 149 Query: 142 ------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 EGE + LSL E+ + +KT L + + +++IA + ++ LK Sbjct: 150 GQVLDMEGEHQXLSL--------EELQTIHANKTGKLLAYPFQAAAIIAELSPEMQVKLK 201 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + G +G+AFQ+ DDVLD E+GK +D + K T P +L G + F Sbjct: 202 TVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALL----GLEESIAFCNQ 257 Query: 256 TINDGKISVENLKK 269 T++ +E + + Sbjct: 258 TLDQANEKLEEIAQ 271 >gi|58038726|ref|YP_190690.1| dimethylallyltransferase [Gluconobacter oxydans 621H] gi|58001140|gb|AAW60034.1| Dimethylallyltransferase [Gluconobacter oxydans 621H] Length = 301 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 117/244 (47%), Gaps = 31/244 (12%) Query: 20 LKRICSDVE--------MIP-------DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 L R CS++E M+P + ++Y GGKRLR L + A + Sbjct: 14 LARACSEIESTIDTLLPMVPGDESVLIEAMRYAALGGGKRLRGFLAVEVATLFGADRKAA 73 Query: 65 VLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + +A ++E +H +L+HDD+ LRRG+ + + ++L GD L ++AF +++ Sbjct: 74 LRVAASVELLHAYSLVHDDLPSMDDDDLRRGQPSTHKQFDEAIAILAGDALQTRAFEILV 133 Query: 123 E--TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY---------LHVIKSKTAV 171 E T + A +A A G + + +D+ E LH +K T Sbjct: 134 EPETSPNATVRANLALALAQASGSAGMVG-GQVIDIRGEGRALPLDQVRRLHALK--TGA 190 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L A E +++A V ++ R A+ +YG +LG AFQ+ DDVLD E+GK G+D + Sbjct: 191 LIRYAAESGAILADVDDARRAAIVAYGRDLGTAFQVADDVLDSTATAEELGKTAGKDEAS 250 Query: 232 GKPT 235 GK T Sbjct: 251 GKST 254 >gi|90422021|ref|YP_530391.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18] gi|90104035|gb|ABD86072.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18] Length = 308 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 121/269 (44%), Gaps = 27/269 (10%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPD----------VVKYLIFSGGKRLRPMLTLATAL 55 D T D E +L R+ SD +++PD ++Y +GGKRLRP L + +A Sbjct: 15 DQTADDTEA----LLARLLSD-QLLPDEIARPRRLMEAIRYSSLAGGKRLRPFLVVESAA 69 Query: 56 MLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFL 113 + +L A+E IH +L+HDD+ +D+S LRRG+ + + T++L GD L Sbjct: 70 VFGVPRGAALLAGAALECIHCYSLIHDDLPAMDNSELRRGRPTLHRAYDDATAILAGDAL 129 Query: 114 LSQAFCMVIETK-SQEALEALSLVACTLAEGELRQLSLSKNLDVTEE---------DYLH 163 L+ AF ++ + +A L+L + + + LD+ E D Sbjct: 130 LTLAFDIITRDEIHSDAGVRLALTRALARASGIGGMVGGQMLDLAGEGRFGDREPVDVAR 189 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 + + KT L +++ +AL YG LG AFQ+ DD+LD G+ +GK Sbjct: 190 LQQMKTGALLRFGCIAGAILGQATKEQTKALDDYGRALGEAFQIADDLLDVEGDAAALGK 249 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNF 252 G D K T L KR ++ Sbjct: 250 PAGADAALNKTTFVTQLGIDGAKKRVRDL 278 >gi|256394108|ref|YP_003115672.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928] gi|256360334|gb|ACU73831.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928] Length = 346 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 102/208 (49%), Gaps = 3/208 (1%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP LTL TA + + V +A A+E +H +LLHDDV+D RR + A V+ Sbjct: 62 GKAIRPALTLLTARAVGGSAEAAVPVAVAVELVHNFSLLHDDVMDADLTRRHRPTAWSVF 121 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAEGELRQLSLSKNLDVTE 158 G ++L GD LL+ A ++ + + E + L G+ + + DV+ Sbjct: 122 GISQAILAGDALLAVANRLLAQEPAPVCDRGAEWIGTCCVELCAGQWSDMDFEQRADVSV 181 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + L + KT L A + +L G + L ++G LG+AFQ VDD+L G+ Sbjct: 182 SEVLAMAAGKTGALLGCACALGALAGGGTPAAAGRLDAFGRKLGLAFQYVDDLLGIWGDP 241 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGT 246 GK + D GK +LPV+ A GT Sbjct: 242 AVTGKPVFADLERGKKSLPVVAALTSGT 269 >gi|229546828|ref|ZP_04435553.1| geranyltranstransferase [Enterococcus faecalis TX1322] gi|256852634|ref|ZP_05558005.1| geranyltranstransferase [Enterococcus faecalis T8] gi|257077869|ref|ZP_05572230.1| polyprenyl synthetase [Enterococcus faecalis JH1] gi|294780571|ref|ZP_06745934.1| geranyltranstransferase [Enterococcus faecalis PC1.1] gi|307268062|ref|ZP_07549450.1| geranyltranstransferase [Enterococcus faecalis TX4248] gi|307289416|ref|ZP_07569370.1| geranyltranstransferase [Enterococcus faecalis TX0109] gi|307290056|ref|ZP_07569980.1| geranyltranstransferase [Enterococcus faecalis TX0411] gi|229307993|gb|EEN73980.1| geranyltranstransferase [Enterococcus faecalis TX1322] gi|256711979|gb|EEU27016.1| geranyltranstransferase [Enterococcus faecalis T8] gi|256985899|gb|EEU73201.1| polyprenyl synthetase [Enterococcus faecalis JH1] gi|294452398|gb|EFG20837.1| geranyltranstransferase [Enterococcus faecalis PC1.1] gi|306498898|gb|EFM68392.1| geranyltranstransferase [Enterococcus faecalis TX0411] gi|306499671|gb|EFM69034.1| geranyltranstransferase [Enterococcus faecalis TX0109] gi|306515703|gb|EFM84230.1| geranyltranstransferase [Enterococcus faecalis TX4248] gi|315029671|gb|EFT41603.1| geranyltranstransferase [Enterococcus faecalis TX4000] gi|315031732|gb|EFT43664.1| geranyltranstransferase [Enterococcus faecalis TX0017] gi|315147933|gb|EFT91949.1| geranyltranstransferase [Enterococcus faecalis TX4244] gi|315165153|gb|EFU09170.1| geranyltranstransferase [Enterococcus faecalis TX1302] gi|323480221|gb|ADX79660.1| Farnesyl-diphosphate synthase [Enterococcus faecalis 62] gi|327534568|gb|AEA93402.1| geranyltranstransferase [Enterococcus faecalis OG1RF] Length = 293 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 25/259 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC------------MVIETKSQEA 129 + LRRGK V+G T++L GD LL+ AF +++ + +A Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKA 143 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +VA + + E ++SL T E+ V + KT L AL ++A Sbjct: 144 AGNQGMVAGQMGDIEGEKVSL------TLEELAAVHEKKTGALIEFALIAGGILANQTEE 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L + + G+AFQ+ DD+LD ++GK +G D K T P +L G Sbjct: 198 VIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGA 253 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + +G +E +K Sbjct: 254 KDALTHQLAEGSAVLEKIK 272 >gi|23308904|ref|NP_601376.2| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] gi|21324942|dbj|BAB99565.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] Length = 371 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 80/250 (32%), Positives = 119/250 (47%), Gaps = 31/250 (12%) Query: 30 IPDVVKYL---IFSGGKRLRPMLTLATALMLEYRGDNHVLL------ACAIEFIHTATLL 80 + D V +L + +GGKR+RP+ A L + ++ L A ++EFI L+ Sbjct: 45 VTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALI 104 Query: 81 HDDVVDDSALRRG-KVAARLV---------------WGNQTSVLVGDFLLSQAFCMVIET 124 HDD++D S RRG R V +G S+L GD L A M+ ++ Sbjct: 105 HDDIIDSSDTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDMLQDS 164 Query: 125 K-SQEAL----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA-ALE 178 S EAL +A + + G+L + L + + + E V + KTA A L Sbjct: 165 GLSAEALARTRDAWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLH 224 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + IAG + AL YG ++GIAFQL DD+L G+ GK G+D R GK T+ + Sbjct: 225 LGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGDPAITGKPAGDDIREGKRTVLL 284 Query: 239 ILAFQRGTKR 248 LA QR K+ Sbjct: 285 ALALQRADKQ 294 >gi|192288955|ref|YP_001989560.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] gi|192282704|gb|ACE99084.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] Length = 308 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 107/233 (45%), Gaps = 12/233 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y GGKRLRP L + +A + +L+ A+E IH +L+HDD+ +D+S Sbjct: 46 DAIRYSTLGGGKRLRPFLAVESAAVFGIDRAAALLVGAALECIHCYSLIHDDLPSMDNSD 105 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE-GELRQL 148 LRRG+ + + T++L GD LL+ AF +V + L+ LA L + Sbjct: 106 LRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHNDPTVRLLLTRVLARCAGLGGM 165 Query: 149 SLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + LD+ E D + + KT L +++ +AL YG Sbjct: 166 VGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQASPDQYRALDDYGR 225 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 LG AFQ+ DD+LD G+ +GK G D GK T L +R ++ Sbjct: 226 ALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKQRLRDL 278 >gi|327543259|gb|EGF29692.1| polyprenyl synthetase [Rhodopirellula baltica WH47] Length = 616 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 28/229 (12%) Query: 41 GGKRLRPMLTLAT--ALM------------LEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 GGK RP +TLA A+M L D A +IE H A+L+HDD+ D Sbjct: 285 GGKHSRPFITLAAYDAMMGGDGTGADGEDVLNRVPDAVRRAALSIETFHKASLVHDDIED 344 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--------IETKSQ-EALEALSLVA 137 A R G+ A +G T++ VGD+L+ + ++ ++ +++ + L++L+ Sbjct: 345 GDAFRYGQPAVHQRFGTATAINVGDYLIGLGYRLLSRNMMGDDVDAETRVDLLDSLAAAH 404 Query: 138 CTLAEGELRQLSL--SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L+EG+ +L +K+ +T D L + KT+ F AAL +AG +++ ++ Sbjct: 405 VRLSEGQGAELLWRDAKDRRLTPLDALKIYALKTSPAFEAALYSGVRMAGDASALIDPIR 464 Query: 196 SYGMNLGIAFQLVDDVLDYRG-EVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + NLG+AFQ+++D+ D+ G + N++ G D G+PTL LA Q Sbjct: 465 KFSRNLGVAFQIINDLNDWAGDDSNKL--TAGADVIGGRPTLLWALALQ 511 >gi|15617063|ref|NP_240276.1| geranyltranstransferase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681815|ref|YP_002468201.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471517|ref|ZP_05635516.1| geranyltranstransferase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11386920|sp|P57537|ISPA_BUCAI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|25403631|pir||B84984 geranyltranstransferase (EC 2.5.1.10) [imported] - Buchnera sp. (strain APS) gi|10039128|dbj|BAB13162.1| geranyltranstransferase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624658|gb|ACL30813.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 282 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 70/252 (27%), Positives = 131/252 (51%), Gaps = 28/252 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 +KY +FSG KRLR L +T + + +++ AIEFIH+ +L+HDD+ +D+ R Sbjct: 36 MKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDNDNFR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELR 146 RGK++ + +G TS+L GD L S AF ++ + + + ++ +S ++ ++ Sbjct: 96 RGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGSS--- 152 Query: 147 QLSLSKNLDVTEE------DYLHVIK-SKTAVLFSAALEVSSLIA-GVQNSVRQALKSYG 198 + + +NLD+ E L +I KT+ L +A+ + + S+ L + Sbjct: 153 GMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLMRSAVRLVYFSSNNFSKSILSILDLFS 212 Query: 199 MNLGIAFQLVDDVLDYRGE-VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +++G+AFQ+ DD+LD++ + V K I + K T P+I+ K+ K K + Sbjct: 213 ISIGLAFQIQDDILDFKKDSVKTDNKKIIK-----KHTYPLIIGLDESRKKIKQLHKKSF 267 Query: 258 NDGKISVENLKK 269 +++ +LKK Sbjct: 268 ----LALNSLKK 275 >gi|15231877|ref|NP_188071.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75274215|sp|Q9LUE1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9, chloroplastic; Short=GGPP synthase 9; Short=GGPS9; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9; AltName: Full=Dimethylallyltranstransferase 9; AltName: Full=Farnesyl diphosphate synthase 9; AltName: Full=Farnesyltranstransferase 9; AltName: Full=Geranyltranstransferase 9; Flags: Precursor gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana] gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana] Length = 360 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 120/228 (52%), Gaps = 14/228 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT++L+HDD+ +D+ Sbjct: 93 IQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDN 152 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALE---------ALSLVA 137 + LRRGK V+G +VL GD LL+ AF M + + A E A ++ Sbjct: 153 ADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPEKMIRAVVELARAIGT 212 Query: 138 CTLAEGELRQLSLSK-NLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L+ + N D ++L I KTA L AA + ++ G + L+ Sbjct: 213 TGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLR 272 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 Y +G+ FQ+VDD+LD E+GK G+D GK T P ++ + Sbjct: 273 KYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLE 320 >gi|227823787|ref|YP_002827760.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii NGR234] gi|227342789|gb|ACP27007.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii NGR234] Length = 360 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 10/215 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D +++ + +GGKRLRP L + +L D + + A+E +H +L+HDD+ Sbjct: 100 DAMRHGVLNGGKRLRPFLVAESTALLGGSADAALRIGAALECVHCYSLVHDDLPAMDDDD 159 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-----QEALEALSLVACTLAEGE 144 LRRG+ + + T++L GD LL+ AF +V ++ Q+ L+L G Sbjct: 160 LRRGQPTVHIAFDEATAILAGDSLLTFAFDIVAAPETPLSDGQKTALVLALARAAGLGGM 219 Query: 145 LRQLSLSKNLDVTEEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 +L + T D ++ KT L A E ++IA R+ L+++G + Sbjct: 220 AGGQALDLAAEKTAPDEAAIVTLQAMKTGALIRFACEAGAIIADAGLEDRRRLRAFGEKI 279 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G+AFQL DD+LD + MGK G+D GK TL Sbjct: 280 GLAFQLADDLLDLTADAEAMGKATGKDAARGKGTL 314 >gi|258652703|ref|YP_003201859.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233] gi|258555928|gb|ACV78870.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233] Length = 385 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 25/225 (11%) Query: 43 KRLRPMLTL---ATALMLEYRGDNH--VLLACAIEFIHTATLLHDDVVDDSALRRG---- 93 KR+RP +T A + G+ V ++ A+E +H L+HDDV+D+S RRG Sbjct: 84 KRIRPTMTYLGWAACAGPDRTGERRQIVTVSAALELLHLFALVHDDVMDESDSRRGVPTV 143 Query: 94 -KVAARL-----------VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + A R ++G ++L GD L++A M+ ET LV L Sbjct: 144 HRQAGRRHAATGAVGDPELFGTSIAILAGDLALAEAEGMIAETPPATRRLWRHLV-VELV 202 Query: 142 EGELRQLS--LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ + L+ ++ D+ + ++KS + LE+ ++IAG +S R AL +YG Sbjct: 203 VGQRQDLTGTAARRRDLPFAHSVAILKSGRYTV-QRPLELGAVIAGAPDSTRLALSNYGQ 261 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +LG AF L DDVL G+ GK G+D +GKPT+ + +A R Sbjct: 262 HLGEAFALRDDVLGVWGDPARTGKPAGDDLISGKPTVLLSIAVDR 306 >gi|284051507|ref|ZP_06381717.1| polyprenyl synthetase [Arthrospira platensis str. Paraca] Length = 537 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 120/254 (47%), Gaps = 20/254 (7%) Query: 2 KMLEDLTLKDMEKVNFLILKR--ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 + LED + K+ I +R I E + D++ F GGK LRP + ++ A + Sbjct: 181 QALEDSRIAIGAKIQEFIGRRREIIGSYEPLYDLLLDYPFRGGKMLRPTMCISAARAMGG 240 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G + A A+E H A L+HDD+ D S RRGK G ++ VGD A Sbjct: 241 MGQVALSTAAALELYHNAFLIHDDIEDGSESRRGKGTLHHNIGIPRAINVGDATNVLAVG 300 Query: 120 MVIE-------TKSQEALEALSLVACTLAEGELRQLS-LSKNL-DVTEEDYLHVIKSKTA 170 +++E TK+ L + +A EG+ +L +++N ++++ DY + KT Sbjct: 301 LLLENLSAIGVTKTLNVLHEIEFMARQSVEGQAMELDWVAENTQNLSDRDYFKMCVKKTC 360 Query: 171 VL-FSAALEVSSLIAGVQNSVRQAL-------KSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 F + LI G ++ Q L +GM LGIAFQ+ DD+L+ G++ G Sbjct: 361 WYSFMTPCRI-GLIVGNSSANPQDLVEPLAGVTRFGMILGIAFQIQDDLLNLVGDMKAYG 419 Query: 223 KNIGEDFRNGKPTL 236 K IG D GK TL Sbjct: 420 KEIGGDIYEGKRTL 433 >gi|291569742|dbj|BAI92014.1| polyprenyl synthetase family protein [Arthrospira platensis NIES-39] Length = 537 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 120/254 (47%), Gaps = 20/254 (7%) Query: 2 KMLEDLTLKDMEKVNFLILKR--ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 + LED + K+ I +R I E + D++ F GGK LRP + ++ A + Sbjct: 181 QALEDSRIAIGAKIQEFIGRRREIIGSYEPLYDLLLDYPFRGGKMLRPTMCISAARAMGG 240 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G + A A+E H A L+HDD+ D S RRGK G ++ VGD A Sbjct: 241 MGQVALSTAAALELYHNAFLIHDDIEDGSESRRGKGTLHHNIGIPRAINVGDATNVLAVG 300 Query: 120 MVIE-------TKSQEALEALSLVACTLAEGELRQLS-LSKNL-DVTEEDYLHVIKSKTA 170 +++E TK+ L + +A EG+ +L +++N ++++ DY + KT Sbjct: 301 LLLENLSAIGVTKTLNVLHEIEFMARQSVEGQAMELDWVAENTQNLSDRDYFKMCVKKTC 360 Query: 171 VL-FSAALEVSSLIAGVQNSVRQAL-------KSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 F + LI G ++ Q L +GM LGIAFQ+ DD+L+ G++ G Sbjct: 361 WYSFMTPCRI-GLIVGNSSANPQDLVEPLAGVTRFGMILGIAFQIQDDLLNLVGDMKAYG 419 Query: 223 KNIGEDFRNGKPTL 236 K IG D GK TL Sbjct: 420 KEIGGDIYEGKRTL 433 >gi|238917015|ref|YP_002930532.1| geranyltranstransferase [Eubacterium eligens ATCC 27750] gi|238872375|gb|ACR72085.1| geranyltranstransferase [Eubacterium eligens ATCC 27750] Length = 297 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/251 (27%), Positives = 124/251 (49%), Gaps = 26/251 (10%) Query: 15 VNFLILKRICSDVEM---IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA--- 68 +N +IL+ + + + I + + Y + +GGKR+RPML L + G N + Sbjct: 15 INDIILRYLPEETGLDKKIRESMNYSVNAGGKRVRPMLMLEVYKLC---GGNDCQVVYPF 71 Query: 69 -CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---- 121 A+E IH+ +L+HDD+ +D+ RRG++ V+G +L GD LL+ A+ ++ Sbjct: 72 MAALECIHSYSLVHDDLPAMDNDDYRRGRLTTHKVFGEDFGILAGDGLLNLAYEIMAEAL 131 Query: 122 ------IETKSQEALEALSLVACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173 IETK++ A+E ++ A + G+ + L+ ++EE + + KT L Sbjct: 132 VSGEGDIETKAK-AMEVIARKAGIKGMVGGQAVDVELTGRT-LSEEQLDFIFRLKTGALI 189 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 AA + +AG + L +G AFQ+ DD+LD + E+GK + D +N K Sbjct: 190 EAAFLAGAYLAGCDDETADKLCRAASLIGFAFQIRDDILDVTSSLEELGKPVFSDEKNNK 249 Query: 234 PTLPVILAFQR 244 T + ++ Sbjct: 250 TTYVTLYGMEK 260 >gi|297526316|ref|YP_003668340.1| Polyprenyl synthetase [Staphylothermus hellenicus DSM 12710] gi|297255232|gb|ADI31441.1| Polyprenyl synthetase [Staphylothermus hellenicus DSM 12710] Length = 365 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/338 (26%), Positives = 155/338 (45%), Gaps = 47/338 (13%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---DNHVLLACAIEFIHTATL 79 + S V IP + + GGKRLR L L ++ D+ L IEF+ + L Sbjct: 33 VSSKVVDIPFISRDYTLRGGKRLRAFLVLIGYWSRKWGYGSIDSVKYLMAGIEFLQSYLL 92 Query: 80 LHDDVVDDSALRRGKVAARLVW-----------------GNQTSVLVGDFLLSQAFCMVI 122 +HDD++D+ +RRG VW G +++VGD+L S A M Sbjct: 93 VHDDIMDEDEIRRGGPTVH-VWFDKKCREGGLIGRCKHYGVSQAIIVGDYLESLAVSMF- 150 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDV----------TEEDYLHVIKSKTAVL 172 T+ AL + T G +R ++ + LDV +E+D ++ KTA Sbjct: 151 -TRLNLPDYALKELIKTYTRG-IRLVAYGQFLDVLIANTPLQKVSEDDVYNIHLLKTA-- 206 Query: 173 FSAALEVSSLIAGVQN-----SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 S +E+ + + + + L Y + GIAFQL DD+L G+ GK +G Sbjct: 207 -SYTVELPLHLGAIASLMYDKELLTELSQYALPAGIAFQLQDDILGLYGDPKVTGKPVGS 265 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK---ISVENLKKAFIIMRENRALVDTE 284 D R K TL ++ A+Q +K F + + K I+ E++++ I+RE +L + Sbjct: 266 DVREKKKTLLIVKAYQLADTGDKKFLEELYDKKKPEEITDEDVRRVQSIVRETGSLDYSV 325 Query: 285 YRAYSYGQKAKDSLRC--LPDSSWKKSLMEVVDFCLQR 320 + Y ++A+++L+ + + S KK L +++ ++R Sbjct: 326 KKMNEYVERARNALKSSIIINESAKKVLDWLLELFVRR 363 >gi|227517904|ref|ZP_03947953.1| geranyltranstransferase [Enterococcus faecalis TX0104] gi|229548922|ref|ZP_04437647.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200] gi|255971435|ref|ZP_05422021.1| polyprenyl synthetase [Enterococcus faecalis T1] gi|255974048|ref|ZP_05424634.1| polyprenyl synthetase [Enterococcus faecalis T2] gi|256617904|ref|ZP_05474750.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200] gi|256761737|ref|ZP_05502317.1| polyprenyl synthetase [Enterococcus faecalis T3] gi|256960163|ref|ZP_05564334.1| polyprenyl synthetase [Enterococcus faecalis Merz96] gi|257089390|ref|ZP_05583751.1| polyprenyl synthetase [Enterococcus faecalis CH188] gi|257415599|ref|ZP_05592593.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG] gi|257421230|ref|ZP_05598220.1| geranyltranstransferase [Enterococcus faecalis X98] gi|293382531|ref|ZP_06628465.1| geranyltranstransferase [Enterococcus faecalis R712] gi|293387869|ref|ZP_06632408.1| geranyltranstransferase [Enterococcus faecalis S613] gi|307275463|ref|ZP_07556605.1| geranyltranstransferase [Enterococcus faecalis TX2134] gi|307278969|ref|ZP_07560028.1| geranyltranstransferase [Enterococcus faecalis TX0860] gi|312900452|ref|ZP_07759759.1| geranyltranstransferase [Enterococcus faecalis TX0470] gi|312904544|ref|ZP_07763702.1| geranyltranstransferase [Enterococcus faecalis TX0635] gi|312906866|ref|ZP_07765863.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512] gi|312952746|ref|ZP_07771608.1| geranyltranstransferase [Enterococcus faecalis TX0102] gi|312978879|ref|ZP_07790605.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516] gi|227074658|gb|EEI12621.1| geranyltranstransferase [Enterococcus faecalis TX0104] gi|229305943|gb|EEN71939.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200] gi|255962453|gb|EET94929.1| polyprenyl synthetase [Enterococcus faecalis T1] gi|255966920|gb|EET97542.1| polyprenyl synthetase [Enterococcus faecalis T2] gi|256597431|gb|EEU16607.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200] gi|256682988|gb|EEU22683.1| polyprenyl synthetase [Enterococcus faecalis T3] gi|256950659|gb|EEU67291.1| polyprenyl synthetase [Enterococcus faecalis Merz96] gi|256998202|gb|EEU84722.1| polyprenyl synthetase [Enterococcus faecalis CH188] gi|257157427|gb|EEU87387.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG] gi|257163054|gb|EEU93014.1| geranyltranstransferase [Enterococcus faecalis X98] gi|291080079|gb|EFE17443.1| geranyltranstransferase [Enterococcus faecalis R712] gi|291082716|gb|EFE19679.1| geranyltranstransferase [Enterococcus faecalis S613] gi|295113841|emb|CBL32478.1| farnesyl-diphosphate synthase [Enterococcus sp. 7L76] gi|306504356|gb|EFM73567.1| geranyltranstransferase [Enterococcus faecalis TX0860] gi|306507851|gb|EFM76979.1| geranyltranstransferase [Enterococcus faecalis TX2134] gi|310627120|gb|EFQ10403.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512] gi|310629262|gb|EFQ12545.1| geranyltranstransferase [Enterococcus faecalis TX0102] gi|310632057|gb|EFQ15340.1| geranyltranstransferase [Enterococcus faecalis TX0635] gi|311288316|gb|EFQ66872.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516] gi|311292428|gb|EFQ70984.1| geranyltranstransferase [Enterococcus faecalis TX0470] gi|315153058|gb|EFT97074.1| geranyltranstransferase [Enterococcus faecalis TX0031] gi|315156830|gb|EFU00847.1| geranyltranstransferase [Enterococcus faecalis TX0043] gi|315157617|gb|EFU01634.1| geranyltranstransferase [Enterococcus faecalis TX0312] gi|315171919|gb|EFU15936.1| geranyltranstransferase [Enterococcus faecalis TX1342] gi|315577402|gb|EFU89593.1| geranyltranstransferase [Enterococcus faecalis TX0630] Length = 293 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 25/259 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC------------MVIETKSQEA 129 + LRRGK V+G T++L GD LL+ AF +++ + +A Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKA 143 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +VA + + E ++SL T E+ V + KT L AL ++A Sbjct: 144 AGNQGMVAGQMGDIEGEKVSL------TLEELAAVHEKKTGALIEFALIAGGVLANQTEE 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L + + G+AFQ+ DD+LD ++GK +G D K T P +L G Sbjct: 198 VIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGA 253 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + +G +E +K Sbjct: 254 KDALTHQLAEGSAVLEKIK 272 >gi|256957073|ref|ZP_05561244.1| polyprenyl synthetase [Enterococcus faecalis DS5] gi|256947569|gb|EEU64201.1| polyprenyl synthetase [Enterococcus faecalis DS5] gi|315034211|gb|EFT46143.1| geranyltranstransferase [Enterococcus faecalis TX0027] Length = 293 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 25/259 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-------- 133 + LRRGK V+G T++L GD LL+ AF ++ ++ + + L Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKT 143 Query: 134 ----SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +VA + + E ++SL T E+ V + KT L AL ++A Sbjct: 144 AGNQGMVAGQMGDIEGEKVSL------TLEELAAVHEKKTGALIEFALIAGGILANQTEE 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L + + G+AFQ+ DD+LD ++GK +G D K T P +L G Sbjct: 198 VIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGA 253 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + +G +E +K Sbjct: 254 KDALTHQLAEGSAVLEKIK 272 >gi|257081234|ref|ZP_05575595.1| polyprenyl synthetase [Enterococcus faecalis E1Sol] gi|256989264|gb|EEU76566.1| polyprenyl synthetase [Enterococcus faecalis E1Sol] Length = 293 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 25/259 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC------------MVIETKSQEA 129 + LRRGK V+G T++L GD LL+ AF +++ + +A Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKA 143 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +VA + + E ++SL T E+ V + KT L AL ++A Sbjct: 144 AGNQGMVAGQMGDIEGEKVSL------TLEELAAVHEKKTGALIEFALIAGGVLANQTEE 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L + + G+AFQ+ DD+LD ++GK +G D K T P +L G Sbjct: 198 VIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGA 253 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + +G +E +K Sbjct: 254 KDALTHQLAEGSAVLEKIK 272 >gi|153004002|ref|YP_001378327.1| polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5] gi|152027575|gb|ABS25343.1| Polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5] Length = 299 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 18/256 (7%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L +T + ++ L +R E + + ++Y + GGKRLRP L LA E G + Sbjct: 17 LRSVTERLEPRLAALADERRGQGPERLVEAIRYALLGGGKRLRPALVLAAC---EAHGGD 73 Query: 64 H------VLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLS 115 + A A+E +HT +L+HDD+ LRRG+ + T+VLVGD L S Sbjct: 74 ASDGSLAMRFAVALEAVHTYSLVHDDLPAMDDDDLRRGRPTVHKAYDEATAVLVGDALQS 133 Query: 116 QAFCMVIETKSQEALEALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 AF ++ A L+ A + EG+ R + ++ + E + L ++++KT L Sbjct: 134 LAFRHLLAAPQPTAAALARLLAENAYLMVEGQARDIQ-GEHARLAEAEVLELMRTKTGAL 192 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 ++A+ + AG + G+ LG+AFQ+ DD+LD + +GK G+D G Sbjct: 193 LASAVAGGAACAGAAVEAVYPI---GLKLGLAFQIADDLLDLTADTQTLGKRAGKDADAG 249 Query: 233 KPTLPVILAFQRGTKR 248 K TLP ++ + +R Sbjct: 250 KSTLPALVGIEEARRR 265 >gi|317495197|ref|ZP_07953567.1| polyprenyl synthetase [Gemella moribillum M424] gi|316914619|gb|EFV36095.1| polyprenyl synthetase [Gemella moribillum M424] Length = 286 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 113/214 (52%), Gaps = 29/214 (13%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDV 84 E++ + Y + + GK++RP L+ +L+Y G++ + +A AIE +HT +L+HDD+ Sbjct: 30 ELLKKSISYSLVNDGKKIRP---LSFLYLLKYYGEDFAEYFDVALAIELVHTYSLVHDDL 86 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----------- 131 +D+ R GK+ V+G +VL GD +L+ AF ++ + + L+ Sbjct: 87 PEMDNDDYRWGKLTNHKVFGQDVAVLTGDAMLTLAFEVLSNSNIKPDLKVKLISQFANYS 146 Query: 132 -ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNS 189 A+ ++A + + + ++ ++ DYL + S KT L L+ + IAG Sbjct: 147 GAMGMIAGQIYDIKQKEYEVNA-------DYLRRMHSLKTGKLIELPLDFACQIAGKVEE 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 + + S+G LGIA+Q+ DD+LDY G+ +GK Sbjct: 200 LSD-INSFGKELGIAYQIKDDILDYYGDFENIGK 232 >gi|121998392|ref|YP_001003179.1| polyprenyl synthetase [Halorhodospira halophila SL1] gi|121589797|gb|ABM62377.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1] Length = 291 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 12/207 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA----CAIEFIHTATLLHDDVV--DD 87 V++ +F+GG R+RP L L A GD+H LA AIE +H A+L+HDD+ DD Sbjct: 31 VRHAVFAGGARVRPRLCLTVAAAC---GDDHPELADAAATAIELMHCASLVHDDLPCFDD 87 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-TLAEGELR 146 +A RRG+ + +G + +VL GD L+ A + T Q A +L+ T A G Sbjct: 88 AATRRGQPSVHAAYGERLAVLAGDALIVHALETLALTVPQAPQRAGALLTTVTRATGMPY 147 Query: 147 QLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 ++ + + E ++KT LF+AA ++ AG ++ + + G LG A+ Sbjct: 148 GITAGQAWESEPEIPVAEYHQAKTGSLFAAATVAGAIAAGAEDQADR-WRIVGERLGEAY 206 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNG 232 Q+ DD+ D G +E+GK G+D +G Sbjct: 207 QVADDLRDAVGAEDELGKPTGQDSSHG 233 >gi|317014338|gb|ADU81774.1| geranyltranstransferase [Helicobacter pylori Gambia94/24] Length = 303 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 138/273 (50%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGKKDYLNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 LRR + T+VL+GD L + +F E S LE+ + LV A G + Sbjct: 101 ILRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNALLESRIIVELVKILSANGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+ + + + L+ Sbjct: 157 KGMILGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGINDEELLKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D K + +L ++ + + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLD--GAKNSFVNLLGLEKASGYAQTLKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 +ND + L+ + ++EN AL++T ++ Sbjct: 273 VLND----LNALEPTYPSLQENLNALLNTLFKG 301 >gi|6690726|gb|AAF24294.1| CrtE [Rhodobacter sphaeroides] Length = 288 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 14/230 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--DDSA 89 Y + GG R+RP L L+ A GD+ +L A A+E IH A+L+HDD+ DD+ Sbjct: 33 YAVTPGGARIRPTLLLSVATAC---GDDRPVLSDAAAVALELIHCASLVHDDLPCFDDAE 89 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-ACTLAEGELRQL 148 +RRGK + ++L GD L+ F ++ + + AL LV A + G + Sbjct: 90 IRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTALAVRTGMPMGI 149 Query: 149 SLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + + + L ++KT LF AA ++ ++ AG + + + G +G AFQ+ Sbjct: 150 CAGQGWESESQINLSAYHRAKTGALFIAATQMGAIAAGYEA---EPWEELGARIGEAFQV 206 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 DD+ D + +GK G+D + +P + KR K+ I Sbjct: 207 ADDLRDALCDAETLGKPAGQDEIHARPNAVREYGVEGAAKRLKDILGGAI 256 >gi|301794294|emb|CBW36718.1| putative geranyltranstransferase [Streptococcus pneumoniae INV104] Length = 291 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 120/253 (47%), Gaps = 29/253 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSAL-- 90 V Y I +GGKR+RP L L L+ H +A A+E IHT +L+HDD+ Sbjct: 31 VLYSIHAGGKRIRPFLLLEVLESLQVTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDY 90 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ---EALEALSLVACTLA---- 141 RRG++ +G ++L GD L + ++ + SQ + + LSL + +L Sbjct: 91 RRGRLTNHKKFGEAMAILAGDALFLDPYALIAQADLPSQIKVDLIANLSLASGSLGMVAG 150 Query: 142 -----EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 EGE + LSL E+ + +KT L + + +++IA + ++ LK+ Sbjct: 151 QVLDMEGEHQHLSL--------EELQTIHANKTGKLLAYPFQAAAIIAELSPEMQVKLKT 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 G +G+AFQ+ DDVLD E+GK +D + K T P +L G + F T Sbjct: 203 VGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALL----GLEESIAFCNQT 258 Query: 257 INDGKISVENLKK 269 ++ +E + + Sbjct: 259 LDQANEKLEEIAQ 271 >gi|256395788|ref|YP_003117352.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928] gi|256362014|gb|ACU75511.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928] Length = 338 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 113/211 (53%), Gaps = 3/211 (1%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 SGGK LRP + L + V A A+EF+H +LLHDDV+D+ +RR + AA Sbjct: 52 SGGKALRPAMALLSGRAAGADMARVVPAAVAVEFVHAFSLLHDDVMDNDRMRRHRPAAWT 111 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDV 156 V+G ++L GD LL+ A ++++ + A A +A T L G+ L DV Sbjct: 112 VFGVPAAILAGDALLALAEEVLLDRGTTGAHRAARHIAATTRKLIAGQALDLGFETRTDV 171 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + ++ + KTA LF+ + + +++A N + AL +G +LG+AFQLVDD+L G Sbjct: 172 SLDECTVMSMDKTAALFACSCSIGAVLAEAPNRLALALSGFGEDLGLAFQLVDDLLGIWG 231 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + GK + D R+ K +LPV A GT Sbjct: 232 QPEVTGKPVLNDLRSRKKSLPVTAALGAGTP 262 >gi|91228844|ref|ZP_01262750.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 12G01] gi|91187615|gb|EAS73941.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 12G01] Length = 128 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 1/127 (0%) Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 +++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A + T Sbjct: 1 MQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHAMRNTTPENSIMI 60 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + I ++ L++ +M+E +L T +A KA L LP+S +K++L+ + Sbjct: 61 REAIEKAN-GMDRLEEILAVMKEAGSLEYTTQKALEEADKAIAELSVLPESEYKQALVTL 119 Query: 314 VDFCLQR 320 +QR Sbjct: 120 AHVAVQR 126 >gi|332203057|gb|EGJ17125.1| ispA protein [Streptococcus pneumoniae GA47901] Length = 291 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 120/253 (47%), Gaps = 29/253 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSAL-- 90 V Y I +GGKR+RP L L L+ H +A A+E IHT +L+HDD+ Sbjct: 31 VLYSIHAGGKRIRPFLLLEVLESLQVAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDY 90 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ---EALEALSLVACTLA---- 141 RRG++ +G ++L GD L + ++ + SQ + + LSL + +L Sbjct: 91 RRGRLTNHKKFGEAMAILAGDALFLDPYALIAQADLPSQIKVDLIANLSLASGSLGMVAG 150 Query: 142 -----EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 EGE + LSL E+ + +KT L + + +++IA + ++ LK+ Sbjct: 151 QVLDMEGEHQHLSL--------EELQTIHANKTGKLLAYPFQAAAIIAELSPEMQVKLKT 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 G +G+AFQ+ DDVLD E+GK +D + K T P +L G + F T Sbjct: 203 VGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALL----GLEESIAFCNQT 258 Query: 257 INDGKISVENLKK 269 ++ +E + + Sbjct: 259 LDQANEKLEEIAQ 271 >gi|315586874|gb|ADU41255.1| geranyltranstransferase [Helicobacter pylori 35A] Length = 303 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 140/273 (51%), Gaps = 34/273 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACAIEFIHTATLLHDDV--VDDS 88 ++ +GGKR RP L LA L + D + +A +IE +HT +L+HDD+ +D++ Sbjct: 41 MVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNA 100 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGEL 145 ALRR + T+VL+GD L + +F E S LE+ + L+ G + Sbjct: 101 ALRRNHPTLHAKYDETTAVLIGDALNTYSF----ELLSNSLLESHIIVELIKILSTNGGI 156 Query: 146 RQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALK 195 + + L + LD E+ +LH + KTA L SA+L + + +G+++ + + L+ Sbjct: 157 KGMVLGQALDCYFENTPLNLEQLTFLH--EHKTAKLISASLMMGLVASGIKDEELFKWLQ 214 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 ++G+ +G+ FQ++DD++D + E GK D K + +L + + + Sbjct: 215 AFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD--GVKNSFVNLLGLEEASGYAQALKTE 272 Query: 256 TINDGKISVENLKKAFIIMREN-RALVDTEYRA 287 ++D + LK A+ +++EN AL++T ++ Sbjct: 273 ILDDLNL----LKPAYPLLQENLNALLNTLFKG 301 >gi|257083890|ref|ZP_05578251.1| geranyltranstransferase [Enterococcus faecalis Fly1] gi|256991920|gb|EEU79222.1| geranyltranstransferase [Enterococcus faecalis Fly1] Length = 293 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 25/259 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC------------MVIETKSQEA 129 + LRRGK V+G T++L GD LL+ AF +++ + +A Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKA 143 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +VA + + E ++SL T E+ V + KT L AL ++A Sbjct: 144 AGNQGMVAGQMGDIEGEKVSL------TLEELAAVHEKKTGALIEFALIAGGVLANQTEE 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L + + G+AFQ+ DD+LD ++GK +G D K T P +L G Sbjct: 198 VIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGA 253 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + +G +E +K Sbjct: 254 KDALTHQLAEGSAVLEKIK 272 >gi|291531063|emb|CBK96648.1| farnesyl-diphosphate synthase [Eubacterium siraeum 70/3] Length = 302 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 6/229 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D Y + +GGKR+RP+L + ++ V A A+E IHT +L+HDD+ Sbjct: 49 DAASYSLEAGGKRIRPVLAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDDDD 108 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEAL--SLVACTLAEGELR 146 +RRG+ + G ++L GD L + A + ++ S E A+ L TL E + Sbjct: 109 MRRGRPSCHKAHGEAVALLAGDALSAYAGKYICDSNLSAEKKTAMIKELYDRTLGMIEGQ 168 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + D T + L + + KT+ L +AA + + AG A ++Y ++G+AFQ Sbjct: 169 TIDTDGKFD-TLDGLLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQ 227 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 +VDD+LD V E+GK IG D + K T +L + + K + + Sbjct: 228 IVDDILDVTSTVEELGKPIGSDAQQEKTTSVTLLGIDKARELAKQYTEG 276 >gi|149925097|ref|ZP_01913408.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1] gi|149814025|gb|EDM73658.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1] Length = 294 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 19/197 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP+LT+A + + ACA+E IH +L+HDD+ +D+ Sbjct: 44 EAMRYAVLQGGKRMRPVLTIAACQAAGGDTAHALPAACALEMIHAYSLVHDDLPAMDNDL 103 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL------EALSLVA-CTLAE 142 RRGK + +G+ ++LVGD LL+ AF ++ + E + +A++++A C Sbjct: 104 ERRGKPTVHVEFGHANAILVGDALLTDAFEVL--ARGTEGVPRANIADAVTILARCAGIN 161 Query: 143 GEL--RQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALE---VSSLIAGVQNSVRQALKS 196 G + + L L D+ + + L + + KT L++AA +SS A + + + L+ Sbjct: 162 GMVGGQALDLIAGQDIADLETLERVHALKTGGLYAAAGALGGLSSPTAAPEAATQ--LER 219 Query: 197 YGMNLGIAFQLVDDVLD 213 YG+ GIAFQ DDVLD Sbjct: 220 YGLAFGIAFQHADDVLD 236 >gi|148985099|ref|ZP_01818338.1| GTP-binding protein LepA [Streptococcus pneumoniae SP3-BS71] gi|147922544|gb|EDK73662.1| GTP-binding protein LepA [Streptococcus pneumoniae SP3-BS71] gi|301800132|emb|CBW32736.1| putative geranyltranstransferase [Streptococcus pneumoniae OXC141] Length = 291 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 34/287 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLE 58 MK E L L + +F ++ S + + V Y I +GGKR+RP L L AL + Sbjct: 1 MKKQEKLALVESALEDFYGDQQFASSLR---ESVLYSIHAGGKRIRPFLLLEVLEALQVT 57 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQ 116 + H +A A+E IHT +L+HDD+ RRG++ +G ++L GD L Sbjct: 58 IK-PAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLD 116 Query: 117 AFCMVIETKSQEALEA-----LSLVACTLA---------EGELRQLSLSKNLDVTEEDYL 162 + ++ + ++ LSL + +L EGE + LSL E+ Sbjct: 117 PYALIAQADLPSQIKVGLIANLSLASGSLGMVAGQVLDMEGEHQHLSL--------EELQ 168 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + +KT L + + +++IA + ++ LK+ G +G+AFQ+ DDVLD E+G Sbjct: 169 TIHANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIG 228 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 K +D + K T P +L G + F T++ +E + + Sbjct: 229 KTPQKDLQAEKSTYPALL----GLEESIAFCNQTLDQANEKLEEIAQ 271 >gi|315574274|gb|EFU86465.1| geranyltranstransferase [Enterococcus faecalis TX0309B] gi|315581571|gb|EFU93762.1| geranyltranstransferase [Enterococcus faecalis TX0309A] Length = 293 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 13/253 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + LRRGK V+G T++L GD LL+ AF ++ ++ + + L + A Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKA 143 Query: 142 EGELRQLS------LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G +S + + +T E+ V + KT L AL ++A V L Sbjct: 144 AGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + + G+AFQ+ DD+LD ++GK +G D K T P +L G K+ Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGAKDALIH 259 Query: 256 TINDGKISVENLK 268 + +G +E +K Sbjct: 260 QLAEGSAVLEKIK 272 >gi|118498042|ref|YP_899092.1| geranyl diphosphate synthase/farnesyl diphosphate synthase [Francisella tularensis subsp. novicida U112] gi|194323267|ref|ZP_03057051.1| geranyltranstransferase [Francisella tularensis subsp. novicida FTE] gi|208779548|ref|ZP_03246893.1| geranyltranstransferase [Francisella novicida FTG] gi|254373397|ref|ZP_04988885.1| geranyltranstransferase [Francisella tularensis subsp. novicida GA99-3549] gi|254374860|ref|ZP_04990341.1| geranyltranstransferase [Francisella novicida GA99-3548] gi|118423948|gb|ABK90338.1| geranyl diphosphate synthase/farnesyl diphosphate synthase [Francisella novicida U112] gi|151571123|gb|EDN36777.1| geranyltranstransferase [Francisella novicida GA99-3549] gi|151572579|gb|EDN38233.1| geranyltranstransferase [Francisella novicida GA99-3548] gi|194322631|gb|EDX20111.1| geranyltranstransferase [Francisella tularensis subsp. novicida FTE] gi|208744509|gb|EDZ90808.1| geranyltranstransferase [Francisella novicida FTG] gi|332678764|gb|AEE87893.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida Fx1] Length = 293 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 109/228 (47%), Gaps = 18/228 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 + Y FSGGKR+R A L N +A A+E IHT +L+HDD+ +D+ LR Sbjct: 32 MHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKIAFAVESIHTYSLIHDDLPAMDNDTLR 91 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCM--------VIETKSQEALEALSLVACTLAEG 143 RGK + + T++L GD L + AF + + + K L A A + G Sbjct: 92 RGKPTCHIKFNEATAILAGDALQALAFEILQDINYSDIDKLKKINKLFAQYCGASGMVGG 151 Query: 144 ELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGM 199 + QL + +K L + E LH +KTA +F A + + +++ QNS + L Sbjct: 152 Q--QLDIEGENKKLKLEELQILHT--NKTAKMFRACIVLPYILSQNQNSQIEDLLVRLSD 207 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +G+ FQ+ DD+LD NE+GK +D K T ++ + K Sbjct: 208 LIGLCFQIKDDILDVTKTTNELGKTSAKDIDANKSTYVSLMGLKDANK 255 >gi|283784240|ref|YP_003364105.1| geranyltranstransferase [Citrobacter rodentium ICC168] gi|282947694|emb|CBG87249.1| geranyltranstransferase [Citrobacter rodentium ICC168] Length = 299 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMQYGALLGGKRLRPFLVYATGKMFGVSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +++++ + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFTIISDAPMPEVTDRDRIAMISELANASGIAG 153 Query: 148 LSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSY 197 + + LD+ E + +H + KT L AA+ + +L AG + +V L Y Sbjct: 154 MCGGQALDLDAEGRQVPLAALEKIH--RHKTGALIRAAVRLGALSAGEKGRNVLPILDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L G ++ +N + I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQARNKARDLI 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 + + S++ L + AL D Sbjct: 268 EEARQSLQQLAAQSLDTSALEALAD 292 >gi|291166548|gb|EFE28594.1| geranyltranstransferase [Filifactor alocis ATCC 35896] Length = 296 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 16/231 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + + Y + +GGKR+RP+L L +A + + + A A+E IHT +L+HDD+ Sbjct: 38 ESMNYSLLAGGKRIRPILCLQSADLYHISNEAILPYASALEMIHTYSLIHDDLPAMDDDD 97 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----VIETKSQEALEALSLVACT-----L 140 LRRGK V+G ++L GD LL+ A+ + ++ + L+A+ +A + Sbjct: 98 LRRGKPTNHKVYGEAIAILAGDGLLNLAYEIMLNDLLHGYTDGKLKAVHYIAKAAGIHGM 157 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G++ L + + D L I ++KT L A++ +L+ G + Y Sbjct: 158 VAGQVLDLQMENQ--RCDADLLKKIHRNKTGELLKASILAGALVGGASEEDCYYWEQYAD 215 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +LG+ FQ+ DD+LD G V MGKN G D + K T P + ++ + K Sbjct: 216 HLGLVFQITDDMLDVIGNVELMGKNTGMDSK--KNTYPQLFGLEKSVELAK 264 >gi|313681119|ref|YP_004058858.1| polyprenyl synthetase [Oceanithermus profundus DSM 14977] gi|313153834|gb|ADR37685.1| Polyprenyl synthetase [Oceanithermus profundus DSM 14977] Length = 329 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 101/202 (50%), Gaps = 11/202 (5%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGK LR L + TA Y D L +A A+E L+HDD+ DDS RRG+ A Sbjct: 41 GGKMLRGRLVVLTARA--YGDDTAALGVAAALELFQNWVLVHDDIEDDSDERRGRPALHR 98 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQLS--LSKNLD 155 + ++ GD L + + ++ E ++ LE LV T A G+ LS L D Sbjct: 99 LVPMPLALNAGDALHAAMWRLLAEAGARRKVLLEFAELVETT-ASGQHLDLSWTLEGRFD 157 Query: 156 VTEEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +T +DYL +++ K A + A L + +L+AG A G+ LG+AFQ+VDDVL+ Sbjct: 158 LTPDDYLEMVRRKAAYYTAVAPLRLGALVAGRMPD--PAFARAGLELGVAFQIVDDVLNL 215 Query: 215 RGEVNEMGKNIGEDFRNGKPTL 236 G+ GK D GK TL Sbjct: 216 EGDPAAYGKEAAGDLWEGKRTL 237 >gi|297190113|ref|ZP_06907511.1| polyprenyl synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|197721176|gb|EDY65084.1| polyprenyl synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 354 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 104/243 (42%), Gaps = 22/243 (9%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW-------------GNQTSVL 108 D V A A+E +H A ++HDD++DDS LR G A + ++L Sbjct: 75 DALVRAAAAMELVHAAAVVHDDLIDDSPLRHGLPTAHVALRAAVVASPRPGAAARSLAML 134 Query: 109 VGDFLLSQA-----FCMVIETKSQEALEALSLVACTLAEGE-LRQLSLSKNLDVTEEDYL 162 VGD L+S A C + A +++A L GE L L + D L Sbjct: 135 VGDLLMSWAGQLFTACGLPAAYLSRARPLWAVLARELVAGECLEILRTGAHPDTAAS--L 192 Query: 163 HVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 VI+ KTA L + + G +R+AL YG+ LG AFQL DD+L G+ Sbjct: 193 KVIRYKTAKYTVEHPLHIGGALGGACEELREALSDYGLPLGEAFQLRDDLLGLFGDPART 252 Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281 GK +D +PT + +Q T E+ + +G E+L + IM RA Sbjct: 253 GKANTDDIAVHRPTALLAWTWQEATATERAELGGLLGNGTTDAESLARVREIMHRTRAPA 312 Query: 282 DTE 284 E Sbjct: 313 RIE 315 >gi|32473980|ref|NP_866974.1| polyprenyl synthetase [Rhodopirellula baltica SH 1] gi|32444517|emb|CAD74516.1| polyprenyl synthetase [Rhodopirellula baltica SH 1] Length = 659 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 117/229 (51%), Gaps = 28/229 (12%) Query: 41 GGKRLRPMLTLAT--ALM------------LEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 GGK RP +TLA A+M L D A +IE H A+L+HDD+ D Sbjct: 328 GGKHSRPFITLAAYDAMMGGDGTGADGEDVLNRVPDAVRRAALSIETFHKASLVHDDIED 387 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--------IETKSQ-EALEALSLVA 137 A R G+ A +G T++ VGD+L+ + ++ ++ ++ + L++L+ Sbjct: 388 GDAFRYGQPAVHQRFGTATAINVGDYLIGLGYRLLSRNMMGDDVDAGTRVDLLDSLAAAH 447 Query: 138 CTLAEGELRQLSL--SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L+EG+ +L +K+ +T D L + KT+ F AAL +AG +++ ++ Sbjct: 448 VRLSEGQGAELLWRDAKDRRLTPLDALKIYALKTSPAFEAALYSGVRMAGDASALIDPIR 507 Query: 196 SYGMNLGIAFQLVDDVLDYRG-EVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + NLG+AFQ+++D+ D+ G + N++ G D G+PTL LA Q Sbjct: 508 KFSRNLGVAFQIINDLNDWAGDDSNKL--TAGADVIGGRPTLLWALALQ 554 >gi|154147947|ref|YP_001405809.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP synthase) [Campylobacter hominis ATCC BAA-381] gi|153803956|gb|ABS50963.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Campylobacter hominis ATCC BAA-381] Length = 284 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 14/212 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDS 88 + + Y++F+GGK R L L M + + +A AIE IHT +L+HDD+ VD++ Sbjct: 30 EALNYMLFAGGKHFRAQLCLGVVETMAPKKLSKAMPIALAIEMIHTYSLIHDDLPSVDNA 89 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--------IETKSQEALEALSLVACTL 140 RRG + +++LVGD L ++AF + I+ K E L + A + Sbjct: 90 DFRRGIATIHKKYDEVSAILVGDALNTEAFYRISRADLNDNIKIKCVEILSKNAGSAGMV 149 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + K L++++ ++LH + KT L A+L + + I+ + + G+ Sbjct: 150 LGQAIDCFFEKKQLEISQVEFLH--RLKTGALIGASLALGATISEIPKEKTDKIYEIGLK 207 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGED-FRN 231 LG+AFQ+ DD++D GK +G D F+N Sbjct: 208 LGLAFQINDDLIDATSSDKIAGKPVGHDEFKN 239 >gi|302387567|ref|YP_003823389.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1] gi|302198195|gb|ADL05766.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1] Length = 298 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 107/213 (50%), Gaps = 15/213 (7%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKRLRPML T + G A+E IHT++L+HDD+ +D+ LRRG Sbjct: 41 YSVRAGGKRLRPMLMEETYRLFGGNGKEIEPFMAAMEMIHTSSLIHDDLPCMDNDTLRRG 100 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-C--TLAEGE-LRQLS 149 A + +G +VL GD LL + M K+ + LVA C LAE + + Sbjct: 101 LPTAWVKFGYDMAVLAGDGLL--IYSMETAAKALSMTDRPDLVARCMGILAEKTGIHGMI 158 Query: 150 LSKNLDV------TEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + +DV ++ LH I + KT L A++ + +L+ G + +++ LG Sbjct: 159 GGQTVDVELAGKPIPKEKLHFIYRLKTGALLEASMMIGALLGGADERQLKLVENMASCLG 218 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +AFQ+ DD+LD +GK + D +N K T Sbjct: 219 MAFQIQDDILDLTSSAEVLGKPVHSDEKNHKTT 251 >gi|218960663|ref|YP_001740438.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase) (Farnesyltranstransferase) [Candidatus Cloacamonas acidaminovorans] gi|167729320|emb|CAO80231.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase) (Farnesyltranstransferase) [Candidatus Cloacamonas acidaminovorans] Length = 296 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 14/253 (5%) Query: 9 LKDMEKVNFLILKRICSDVEMIPD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 +K+ +++ +IL R + P ++Y +F+GGKRLRP LT+ M + Sbjct: 11 MKEKQELVNIILDRFLPRKDEYPKDLHKAMRYSVFAGGKRLRPYLTMTAFEMFNSNIELI 70 Query: 65 VLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +A IE IHT +L+HDD+ D RRGK + ++G ++L GD LL AF ++ Sbjct: 71 TPVAAGIEMIHTYSLIHDDLPDIDNDDFRRGKKSCHTIFGEGVALLAGDALLLSAFELIT 130 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE------DYLHVI-KSKTAVLFSA 175 + L + V E ++ L + +D+ E LH I ++KTA L + Sbjct: 131 LAELDAKLR-VQFVHELAKEVGIKGLIAGQMVDIESEGKKVDKKTLHYIHENKTARLINL 189 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +L +L + + L YG +G+ FQ+VDD+LD G E+GK IG+D + K T Sbjct: 190 SLRFGALAGEAKEEELKILDEYGKLIGLVFQIVDDLLDIEGTQEELGKTIGKDAESAKAT 249 Query: 236 LPVILAFQRGTKR 248 P + K+ Sbjct: 250 FPAVYGIAESHKK 262 >gi|296123158|ref|YP_003630936.1| hypothetical protein Plim_2915 [Planctomyces limnophilus DSM 3776] gi|296015498|gb|ADG68737.1| protein of unknown function DUF116 [Planctomyces limnophilus DSM 3776] Length = 634 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 26/220 (11%) Query: 41 GGKRLRPMLTLAT------ALMLEYRGDNHVL--------LACAIEFIHTATLLHDDVVD 86 GGKRLRP +TLA A L + L +A AIE H A+L+HDD+ D Sbjct: 304 GGKRLRPFITLAAYDALTGAAGLTADHQDQALEYPPAVNRVAMAIEAFHKASLIHDDIQD 363 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACT 139 + R GK +G ++ +GD L+ + +V ++ + + L+A S Sbjct: 364 NDQFRYGKETLHRQYGVGPAINLGDHLIGAGYRLVSASRKELGAEVAADILDAFSAAHMK 423 Query: 140 LAEGELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L EG+ +L S++ D+T + + + KT+ F AAL +AG + + + + Sbjct: 424 LCEGQGAELQWSRSGRHDLTPAEAMKIYALKTSPAFEAALYAGIRMAGPVDDYAEMITQF 483 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNI-GEDFRNGKPTL 236 +LG+AFQ+++D+ D+ G ++ K + G+D ++ +PTL Sbjct: 484 SRHLGVAFQILNDLSDWLG--DDHNKLVAGQDAQSMRPTL 521 >gi|313884672|ref|ZP_07818428.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8] gi|312620040|gb|EFR31473.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8] Length = 300 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 118/232 (50%), Gaps = 15/232 (6%) Query: 24 CSDVEMIPDVVKYLIFS---GGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATL 79 C +E ++VK +++S GGKRLRP++ L + E + + A A+E+IHT +L Sbjct: 21 CLSIEAPLEMVKPMLYSLKNGGKRLRPLMVLLVIDIFEQANLKDGLSTAFALEYIHTYSL 80 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV- 136 +HDD+ +D+ LRRG+ + + T++L GD LL+ AF ++ + + + L L+ Sbjct: 81 IHDDLPAMDNDDLRRGQPTNHVQFDEATAILAGDALLTDAFALIAQEAKLKPRQRLKLIE 140 Query: 137 -------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + + G+L + ++N +T E ++ + KT LFS A + ++I+ + Sbjct: 141 LLSRSAGSTGMVAGQLFDIR-AENQTLTIEALKNIHRLKTGRLFSYACQAGAIISDASDK 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + + G+A+Q+ +D+ D + GK D K T P +L Sbjct: 200 ELKLIDEFAQAFGLAYQIHNDLQDVLLDSQSTGKEEHGDESLHKATYPSLLG 251 >gi|254521204|ref|ZP_05133259.1| geranyltranstransferase [Stenotrophomonas sp. SKA14] gi|219718795|gb|EED37320.1| geranyltranstransferase [Stenotrophomonas sp. SKA14] Length = 292 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 16/222 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y + GGKR+RP+L A+ + + ++ A A+E IH +L+HDD+ L Sbjct: 35 AMRYSVLGGGKRMRPLLVYASGHLFGAQLEHLDAAAMAVELIHAYSLVHDDLPAMDDDDL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--TLAEGE-LRQ 147 RRGK + + T++L GD L ++AF ++ + L A VAC TLA Sbjct: 95 RRGKPTTHIAFDEATAILAGDALQARAFGLLADAP----LPATLRVACLQTLAHASGAAG 150 Query: 148 LSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + + LD+ + + KT L AA+ + +L L S+ Sbjct: 151 MCGGQALDIDATGQQQTLAALTRMHALKTGALIRAAVRMGALCGQAHEPQLAQLDSFADA 210 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 LG+AFQ+ DD+LD ++GK G+D K T P +L Sbjct: 211 LGLAFQVRDDILDVEASSEQLGKTAGKDQAQDKSTFPALLGM 252 >gi|237752529|ref|ZP_04583009.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis ATCC BAA-430] gi|229376018|gb|EEO26109.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis ATCC BAA-430] Length = 287 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 15/204 (7%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDV--VDDSALR 91 ++ +GGKR RP L L+ ++ Y+ +N L A A+E +HT +L+HDD+ +D++ R Sbjct: 36 IVLNGGKRFRPKLLLS--IVASYKVENVKLAFAPALALEILHTYSLIHDDLPAMDNAPFR 93 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG V + ++L GD L +QAF + I T + + L+ G + + L Sbjct: 94 RGCVTLHKKYDEALAILAGDGLNTQAFYL-IATSKLKPKIKIKLIESLSYNGGIYGMVLG 152 Query: 152 KNLDVTEE------DYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + LD E + L VI +KTA L +A+ E+ ++IA R++L G++LG+ Sbjct: 153 QALDCHFEGEKLPLEQLRVIHLNKTAKLIAASFEMGAMIAECDKKTRRSLYQLGLDLGLF 212 Query: 205 FQLVDDVLDYRGEVNEMGKNIGED 228 FQ+ DDV+D E GK D Sbjct: 213 FQIRDDVIDSTQSTQEAGKPTHND 236 >gi|254384667|ref|ZP_05000006.1| polyprenyl synthetase [Streptomyces sp. Mg1] gi|194343551|gb|EDX24517.1| polyprenyl synthetase [Streptomyces sp. Mg1] Length = 357 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 3/184 (1%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E H TLLHDDV+D RRG+ A V+G +++ GD +L+ A ++ + + Sbjct: 105 ELAHNFTLLHDDVIDKDVRRRGRATAWTVFGTPDAIITGDAMLALALRLLAQDGHPASAA 164 Query: 132 ALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A + +A + E G+ + + DV+ ++ L + +KT L A + +L AG Sbjct: 165 ASARLATCIIELCAGQQADCAFEQRPDVSLDECLTMAMAKTGALLGCACALGALYAGAGP 224 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 A+ ++G G+AFQL+DD++ G+ GK G D K +LPV+ A GT Sbjct: 225 DEVDAMDAFGREAGLAFQLIDDLIGIWGDPGHTGKPAGADLIARKKSLPVVAALTSGTTA 284 Query: 249 EKNF 252 K Sbjct: 285 GKEL 288 >gi|90109651|pdb|2FTZ|A Chain A, Crystal Structure Of Geranyltranstransferase (Ec 2.5.1.10) (Tm0161) From Thermotoga Maritima At 1.90 A Resolution Length = 284 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 10/245 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GG R+RP+L L L + + +A A+E HTA+L+HDD+ +D++ RRG + Sbjct: 45 GGXRIRPLLVLTLGEDLGVEEEXLLDVAVAVELFHTASLIHDDLPPIDNADFRRGXPSCH 104 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN-LDVT 157 +G ++L GD L AF + + E S A L GE + + ++V+ Sbjct: 105 RTYGEDIALLAGDGLFFLAFSQISXIGNSXIFEEFSETAYXLLLGEAMDVEFERRXMEVS 164 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 +E + T LF+ ++ G ++ L G G+AFQ+ DD+ D G Sbjct: 165 QEMVERMYAFXTGALFAFCFSAPFILXGXDHTXMXLL---GEXFGVAFQIYDDLXDILGS 221 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 ++GK++G+D TL + Q + +++ + I E L + ++ E Sbjct: 222 FEKVGKDLGKD--TEXVTLVXXVGIQXAREMADXYYEEVLX--GIESEGLFRTLFLLXEL 277 Query: 278 RALVD 282 +V+ Sbjct: 278 XQMVE 282 >gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis thaliana] Length = 360 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/229 (32%), Positives = 120/229 (52%), Gaps = 14/229 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT++L+HDD+ +D+ Sbjct: 93 VQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDN 152 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALE---------ALSLVA 137 + LRRGK V+G +VL GD LL+ AF M + + A E A ++ Sbjct: 153 ADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGT 212 Query: 138 CTLAEGELRQLSLSK-NLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L G++ L+ + N D ++L I KTA L AA + ++ G + L+ Sbjct: 213 TGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLR 272 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y +G+ FQ+VDD+ D E+GK G+D GK T P ++ +R Sbjct: 273 KYARCIGLLFQVVDDIPDVTKSTEELGKTAGKDVMAGKLTYPRLIGLER 321 >gi|254262249|emb|CAZ90576.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter helveticus] Length = 313 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 124/238 (52%), Gaps = 28/238 (11%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA--LMLEYRGDNHVLLACAIEFIHTATLLHDDV- 84 +++ ++ + GKR+RP+L L TA L E + LACA+E IH A+L DD+ Sbjct: 38 DLVTQAMRDATLAPGKRIRPLLMLLTARDLGCEPSHPGLLDLACAVEMIHAASLTLDDIP 97 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 +D++A+RRG +G ++L LLS+AF +V A E L+ +A G Sbjct: 98 CMDNAAMRRGLPTIHRKFGENVAILAAVALLSKAFGVV------SAAEGLTDAGRAIAVG 151 Query: 144 ELRQLSLSKNL------DVTE------EDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSV 190 EL ++ L D+ E + +H KT VLFSA+L+++++ A + Sbjct: 152 ELSAAVGTQGLVKGQYQDLREGCEPRSTEAIHTTNDLKTGVLFSASLQMAAIAANASGAA 211 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 R L+S+ ++ G AFQL+DD++D + GK+I +D GK TL L +R +R Sbjct: 212 RARLRSFALDFGQAFQLLDDLIDG---LATTGKDINKD--AGKSTLVAALGNERVHQR 264 >gi|254460310|ref|ZP_05073726.1| geranyltranstransferase [Rhodobacterales bacterium HTCC2083] gi|206676899|gb|EDZ41386.1| geranyltranstransferase [Rhodobacteraceae bacterium HTCC2083] Length = 284 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/253 (29%), Positives = 116/253 (45%), Gaps = 18/253 (7%) Query: 20 LKRICSDVEMIPDVVKYLIF--SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 R+ S +P +V+ + + +GGKRLR L +A + + ACAIE +H Sbjct: 12 FTRVLSSFADVP-IVQAMRYATTGGKRLRAFLVRESARVCGVDVARSIAPACAIEALHAY 70 Query: 78 TLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 +L+HDD+ LRRG+ + W + T+VL GD L + AF +V E E S Sbjct: 71 SLVHDDLPCMDDDDLRRGQPTVHVKWDDATAVLCGDALQTLAFELVSEPSCHEDPLVRST 130 Query: 136 VACTLAEGE-LRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 +A TLA + + LD+ T E + KT L + + +++A Sbjct: 131 LALTLARASGAAGMVYGQALDIEAESAANPLTIEQITELQNGKTGALITWSATAGAVLAK 190 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + ALK+YG LG+AFQ+ DD+LD + +GK +D GK T +L Sbjct: 191 ADTN---ALKTYGDALGLAFQIADDILDVTSDAETLGKAAQKDAEAGKATFVSLLGLDGA 247 Query: 246 TKREKNFWKSTIN 258 R + +S + Sbjct: 248 KSRAEMLVESACD 260 >gi|313890735|ref|ZP_07824360.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026] gi|313120836|gb|EFR43950.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026] Length = 289 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 11/220 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 ++Y +GGKR+RP+L L D+H +A A+E IHT +L+HDD+ +D+ Sbjct: 28 AIRYSAEAGGKRIRPLLLLELLEAFSVTLTDSHYDVAAALEMIHTGSLIHDDLPAMDNDD 87 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG++ + T++L GD L AF ++ ET ++ + L+ C + Sbjct: 88 YRRGRLTNHKKFDEATAILAGDSLFLDAFALIAETNLSANIK-VDLMHCLSHSSGTFGMV 146 Query: 150 LSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + LD+ E D + + KT L + ++ IA V + L G+ +G Sbjct: 147 GGQMLDMKAEGQELALTDLQEIHRHKTGCLLAYPFWAAAKIADVDEEILLDLYQAGLKVG 206 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AFQ+ DD+LD + +GK +D K T P +L Sbjct: 207 HAFQVRDDILDVTADFTNLGKTPQKDLTAEKMTYPRLLGL 246 >gi|297537809|ref|YP_003673578.1| polyprenyl synthetase [Methylotenera sp. 301] gi|297257156|gb|ADI29001.1| Polyprenyl synthetase [Methylotenera sp. 301] Length = 304 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 125/245 (51%), Gaps = 20/245 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 + + ++Y GGKR+R +L A + + + ACA+E IH +L+HDD+ Sbjct: 42 QRLHSAMRYSALEGGKRVRALLCYAASELCKTDAKVADAAACAVELIHAYSLVHDDMPCM 101 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVA---- 137 LRRGK + + + T++LVGD L S AF ++ + T++ + L+++A Sbjct: 102 DDDDLRRGKPSCHKQYDDATALLVGDALQSLAFEVLSQANLCTQTNHQVSMLNILAKASG 161 Query: 138 -CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--A 193 +A G+ L S+ K L T+ + +H +K T L AA+ L+ G+ + + A Sbjct: 162 STGMAGGQAIDLASVGKMLSQTDLEQMHQLK--TGALIQAAV----LLGGINGEIEKTAA 215 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 + +Y N+G+AFQ++DD+LD + + +GK G+D KPT IL + + Sbjct: 216 ISTYAKNIGLAFQVIDDILDVEADSSTLGKTAGKDADTNKPTYVSILGLAEAKLHAQQLY 275 Query: 254 KSTIN 258 + I+ Sbjct: 276 DNAID 280 >gi|328793440|ref|XP_396188.3| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Apis mellifera] Length = 210 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 5/213 (2%) Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 + GD++L+ M+ + ++ + LS V L +GE QL + + YL Sbjct: 1 MTGDYILAVTTNMLAKLRNDDITLTLSQVVTDLVQGEFMQLGSKETENERFAHYLTKTYR 60 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KTA L + L+ +++A + + + YG N+G+AFQLVDD+LD+ + MGK Sbjct: 61 KTASLIANTLKAEAMLADADDQLAELAFQYGRNIGLAFQLVDDLLDFVSTLPTMGKPTAA 120 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287 D + G T PV+ A +R + + G + +KAF ++ +++ L T + A Sbjct: 121 DLKLGLATAPVLFACERYPELNAMIMRRFQEPGDV-----EKAFELVHKSQGLEHTRFLA 175 Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + +A + L +S ++K L V D L R Sbjct: 176 RKHCVEAMKLAQSLAESPYQKGLQVVCDLVLNR 208 >gi|157146963|ref|YP_001454282.1| geranyltranstransferase [Citrobacter koseri ATCC BAA-895] gi|157084168|gb|ABV13846.1| hypothetical protein CKO_02740 [Citrobacter koseri ATCC BAA-895] Length = 299 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 120/252 (47%), Gaps = 24/252 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGRMFGVSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +++++ + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSIISDAPMPEVADRDRIAMISELANASGIAG 153 Query: 148 LSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK--- 195 + + LD+ E + +H + KT L AA+ + +L AG + R AL Sbjct: 154 MCGGQALDLAAEGKQVPLEALERIH--RHKTGALIRAAVRLGALSAG--ENGRNALPILD 209 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L G ++ +N + Sbjct: 210 KYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQARNKARD 265 Query: 256 TINDGKISVENL 267 I D + S+ L Sbjct: 266 LIEDARQSLTQL 277 >gi|329770468|ref|ZP_08261847.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325] gi|328836323|gb|EGF85989.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325] Length = 286 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 118/209 (56%), Gaps = 19/209 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPM--LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV- 84 E++ + + Y + + GK++RP+ L L ++Y+ + +A AIE +HT +L+HDD+ Sbjct: 30 ELLKESIIYSLVNDGKKIRPLSFLYLLKFYNIDYK--EYFDVALAIELVHTYSLVHDDLP 87 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV------- 136 +D+ R GK V+G +VL GD +L+ AF ++ ++ + L+ ++L+ Sbjct: 88 EMDNDDYRWGKPTNHRVYGQDIAVLTGDSMLTLAFEVLSKSNINDTLK-VNLIQQFANYS 146 Query: 137 -ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQAL 194 A + G++ + KN V + +YL ++ S KT L L+ + IA ++ + + Sbjct: 147 GAMGMIAGQVYDVK-QKNYQV-DANYLKLMHSLKTGRLIELPLDFACKIARKESDL-DYI 203 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 +S+G LGIA+Q+ DD+LDY GE ++GK Sbjct: 204 RSFGKELGIAYQIKDDILDYYGEFEKIGK 232 >gi|169629079|ref|YP_001702728.1| polyprenyl synthetase [Mycobacterium abscessus ATCC 19977] gi|169241046|emb|CAM62074.1| Probable polyprenyl synthetase [Mycobacterium abscessus] Length = 314 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 112/239 (46%), Gaps = 26/239 (10%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDN---HVLLACA-IEFIHTATLLHDDVVDDSALRRG 93 + GGKRLRP + D VL CA +E +HT L+HDDV+D SA RRG Sbjct: 1 MLRGGKRLRPAFAYWGWRAITDDPDPWNPEVLRVCAALELLHTCALIHDDVIDSSATRRG 60 Query: 94 KVAARL---------VW-------GNQTSVLVGDFLLSQAFCMVIETK-SQEA----LEA 132 + + W G ++L+GD L+ A MV+ + S EA Sbjct: 61 EPTIHVEFAALHRENGWSGSPEQFGISAAILLGDLALTWADDMVVGAQLSPEAHVRARGV 120 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVR 191 S++ + G+ + + D + E L VI+ KTA L++ IAG + Sbjct: 121 WSILRSEVLGGQYLDILSESSGDESVETALRVIRFKTAGYTVQRPLQLGVAIAGENAEIS 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L G+++GIAFQL DDVL G+ GK G+D R+GK T+ + A + +R+ Sbjct: 181 RLLGDVGLDIGIAFQLRDDVLGVFGDPKVTGKPAGDDLRSGKRTVLLAEALRLARQRDS 239 >gi|146166126|ref|XP_001015938.2| Polyprenyl synthetase family protein [Tetrahymena thermophila] gi|146145326|gb|EAR95693.2| Polyprenyl synthetase family protein [Tetrahymena thermophila SB210] Length = 424 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 20/301 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 I + V L+ GGKR RP+L + A ++ +A E +H TL+ DD+ D+S Sbjct: 119 ISEPVWDLLDRGGKRWRPILCIILAEAFNLGQEDVKEIASLCEIVHNGTLVVDDIEDNST 178 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 +RR K L++G S+ G+ + +++ KS + + L + E+ QL Sbjct: 179 VRRDKKCVHLIYGVDISINAGNMMYFAPLHILL--KSNKYTDQQKLRFAKIYAEEMTQLH 236 Query: 150 LSKNLDV-------------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--AL 194 L + D+ TE+ YL + KT VL A L + A V SV + Sbjct: 237 LGQGWDILWHNTDKLEGRIPTEQQYLQMTAHKTGVL--ARLSSRLICAAVNTSVEDEMTI 294 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGK-NIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 + +G+AFQ+ DD+L+ GE + K GED GK +L V+ + Q +K+ Sbjct: 295 SRFSERIGVAFQIQDDILNLEGEEYKKTKGQSGEDIHEGKMSLIVLHSLQNSQPEDKDRL 354 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 ++ + + + +A ++++ ++ + A Q A + + L +S K L+++ Sbjct: 355 FKILSSHTDNQDEIDEAIALVKKTDSISYSRKVAQELVQTAWNDIENLLPASRSKQLLKL 414 Query: 314 V 314 + Sbjct: 415 L 415 >gi|85703528|ref|ZP_01034632.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. 217] gi|85672456|gb|EAQ27313.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. 217] Length = 289 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 8/232 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVV--DDS 88 D + Y GG R+RP + ++ A+ + R D A A+E +H A+L+HDD+ DD+ Sbjct: 29 DALDYATSPGGARIRPTILMSVAMACGDDRPDLSDAAAAALEIMHCASLVHDDLPCFDDA 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-ACTLAEGELRQ 147 LRRGK + + +VL GD L+ +F ++ +A A +L+ A G Sbjct: 89 DLRRGKASVHRAYSEPLAVLTGDALIIMSFEILARVAHHDAGRATALILALARRSGMPNG 148 Query: 148 LSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + + + D +SKT LF AA ++ ++ AG + + G +G AFQ Sbjct: 149 ICAGQGWESEPKVDLEAYHRSKTGALFIAATQMGAIAAGHEP---EPWYELGARIGAAFQ 205 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + DD+ D + +GK +G+D +G+P L R K+ I+ Sbjct: 206 VADDLRDALLDAETLGKPVGQDDLHGRPNAVAELGVPGAVTRLKDILAGAIS 257 >gi|304440276|ref|ZP_07400166.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371325|gb|EFM24941.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 289 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 109/207 (52%), Gaps = 17/207 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDV-- 84 I + +KY + +GGKR+RP+L L + + N + A A+E+IHT +L+HDD+ Sbjct: 31 IYESMKYSLSTGGKRVRPILALVSYSIFNDDSKNFSEIIPFAVALEYIHTYSLIHDDLPA 90 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE--------TKSQEALEALSLV 136 +D+ +RRGK V+ ++L GD LL+ A +V + K + A+++ + Sbjct: 91 MDNDDIRRGKPTNHKVYNEAIAILAGDGLLNLAAEVVAKELEGITDPIKLKRAIKSFRYI 150 Query: 137 -ACTLAEGELRQLSLSKNLDVTE---EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + + +G + ++ +L V E E+ + K KT L A L V +++ G Sbjct: 151 FSSSGIQGMVGGQTIDIDLSVDEMSLEEVETMYKLKTGALIKAPLAVGAIMGGATPEELI 210 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVN 219 +++ Y LG+ +Q+ DD+LDY ++N Sbjct: 211 SIEGYAEQLGLQYQIKDDILDYEDDLN 237 >gi|308070091|ref|YP_003871696.1| geranyltranstransferase [Paenibacillus polymyxa E681] gi|305859370|gb|ADM71158.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Paenibacillus polymyxa E681] Length = 792 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 115/229 (50%), Gaps = 10/229 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC--AIEFIHTATLLHDDVV 85 E + D Y + GKR+RP+LT + EY D ++ ++E++HTA+L+ DD+ Sbjct: 530 EQLIDAANYSLEGDGKRIRPILTWVMGVN-EYGLDASAIVPLLRSLEYMHTASLIFDDLP 588 Query: 86 --DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 D+++ RRG+ V + T+ L G +L+ +A A L+L+ + + Sbjct: 589 SQDNASTRRGRQTLHKVHNSATAELTGLYLIQKAIGEQSSLSQFNAETVLALIQYSAQKA 648 Query: 144 ELRQLSLSKNLD-----VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 E + + +LD +T E + KT V F A L + +++A + AL+ + Sbjct: 649 EDMCMGQAMDLDSKGKALTLEQLNMMCFYKTGVAFEACLVMPAMLAQAEEPEIAALQKFA 708 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++GIAFQ+ DD+LD G++ +GK +G+D N IL + ++ Sbjct: 709 YHMGIAFQIKDDLLDVEGDMLLLGKPVGQDSDNNNSNFVSILGLEGASQ 757 >gi|149202083|ref|ZP_01879056.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. TM1035] gi|149144181|gb|EDM32212.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. TM1035] Length = 304 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 14/235 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV-- 85 D + Y GG R+RP + ++ AL GD+ L A A+E +H A+L+HDD+ Sbjct: 44 DALDYSTSPGGARIRPTILMSVALAC---GDDRPELSDAAAAALEIMHCASLVHDDLPCF 100 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-ACTLAEGE 144 DD+ LRRGK + + +VL GD L+ +F ++ +A A +L+ A G Sbjct: 101 DDADLRRGKPSVHRAYSEPLAVLAGDALIIMSFEILARVAECDAARANALILALARRSGM 160 Query: 145 LRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + + D +SKT LF AA ++ ++ AG + + G +G Sbjct: 161 PNGICAGQGWESEPTVDLEAYHRSKTGALFIAATQMGAIAAGHEP---EPWYELGARIGA 217 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 AFQ+ DD+ D + +GK +G+D +G+P L R K+ I+ Sbjct: 218 AFQVADDLRDALLDAETLGKPVGQDDLHGRPNAVSELGVAGAVTRLKDILAGAIS 272 >gi|332141878|ref|YP_004427616.1| geranyltranstransferase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551900|gb|AEA98618.1| geranyltranstransferase [Alteromonas macleodii str. 'Deep ecotype'] Length = 296 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 119/232 (51%), Gaps = 17/232 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSA 89 D +++ + +GGKR+RP+L L+ + + ++ AIE +H +L+H +DD Sbjct: 34 DAMRHALLAGGKRMRPLLVQVVGNTLDVPKTDQMAISMAIECVHAYSLVHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-----LSLVACT----- 139 LRRG + + T++L GD L + AF ++ + EA LS++A + Sbjct: 94 LRRGMPTCHIAFDEATAILAGDALQALAFTVLADAPLSTYAEAKRPQLLSVLAKSAGYVG 153 Query: 140 LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA-GVQNSVRQALKSY 197 + G+ L S +++ + E LH K KT L A +E+ ++++ + + L +Y Sbjct: 154 MCGGQAIDLASTGESISLDELKRLH--KLKTGALLRACVEMVAIVSEDLLPEAKVDLMAY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++G+AFQ+ DD+LD G ++GK G D GK T P L + G KRE Sbjct: 212 AADIGLAFQVQDDILDVVGSSEKLGKPAGSDEALGKNTFPAKLGME-GAKRE 262 >gi|239627502|ref|ZP_04670533.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239517648|gb|EEQ57514.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 303 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 113/238 (47%), Gaps = 25/238 (10%) Query: 30 IPDVVKYLIFSGGKRLRPMLT-----LATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 I + + Y + +GGKRLRPML L T +LE + + A+E IHT++L+HDD+ Sbjct: 36 ILEAMNYSMMTGGKRLRPMLMQEMCRLFTGCLLE----SVIPFMAAVEMIHTSSLVHDDL 91 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETK-SQEALEALSLVAC 138 +DD +RRGK + +G VL GD L+ AF ET + L + Sbjct: 92 PCMDDDMMRRGKPSTWAEFGEDIGVLTGDALMMYAFETAASAFETSIDPDELSRIGKAMG 151 Query: 139 TLAE---------GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 LA G+ + L+ + ++ + + KT L A++ + +++ G + Sbjct: 152 ILARKTGVYGMIGGQTVDVELAGG-PIPKDKLDFIYRLKTGALIEASMLIGAVLGGAADE 210 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + ++S +G+AFQ+ DD+LD G +GK + D +N K T + + K Sbjct: 211 DCKIVESLARKIGMAFQIQDDILDVTGSEEVIGKPVNSDEKNKKTTYVTLEGLDKAKK 268 >gi|291557469|emb|CBL34586.1| farnesyl-diphosphate synthase [Eubacterium siraeum V10Sc8a] Length = 302 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 6/232 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 D Y + +GGKR+RP+L + ++ V A A+E IHT +L+HDD+ Sbjct: 49 DAASYSLEAGGKRIRPVLAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDDDD 108 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEAL--SLVACTLAEGELR 146 +RRG+ + G ++L GD L + A + ++ E A+ L TL E + Sbjct: 109 MRRGRPSCHKAHGEAVALLAGDALSAYAGKYICDSDLPAEKKTAMIKELYDRTLGMIEGQ 168 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + D T + L + + KT+ L +AA + + AG A ++Y ++G+AFQ Sbjct: 169 TIDTDGKFD-TLDGLLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQ 227 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +VDD+LD V E+GK IG D + K T +L + + K + + N Sbjct: 228 IVDDILDVTSTVEELGKPIGSDAQQEKTTSVTLLGLDKARELAKKYTEGAEN 279 >gi|298245028|ref|ZP_06968834.1| Polyprenyl synthetase [Ktedonobacter racemifer DSM 44963] gi|297552509|gb|EFH86374.1| Polyprenyl synthetase [Ktedonobacter racemifer DSM 44963] Length = 367 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 12/207 (5%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQE 128 +E H TL+HDD+VD RR + VWG + GD F LS+ + + E Sbjct: 101 VELTHNFTLIHDDIVDGDTERRHRPTLWTVWGMPNGINSGDGMFALSRLALWGVLDEGVE 160 Query: 129 ALEALSLVAC------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 A A L AC +AEG+ +S D++ Y+ +I+ KTA L + + E+ + Sbjct: 161 ADIAARLGACLDKACLVVAEGQYLDMSFEGRQDISVAMYIDMIRRKTAELMACSAEMGAR 220 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + L+S+G +GIAFQ+ DD+L E+GK D K +LP++ A Sbjct: 221 LGTRDAEAIARLRSFGEAIGIAFQVRDDLLGVWASSEELGKTEAGDIYRRKQSLPILHAR 280 Query: 243 QRGTKREKNFWKSTINDGKISVENLKK 269 ++ T E ++T+ VE L+K Sbjct: 281 EQATPEE----QATLTRIYQQVEPLEK 303 >gi|332184586|gb|AEE26840.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida 3523] Length = 293 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 14/224 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y FSGGKR+R A L + +A AIE IHT +L+HDD+ +D+ LRRG Sbjct: 34 YSFFSGGKRIRAQFVYAIGEALAIDKADCDKVAFAIESIHTYSLIHDDLPAMDNDTLRRG 93 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALS--LVACTLAEGEL--RQ 147 K + + T++L GD L S AF ++ I L+ ++ C A+G + +Q Sbjct: 94 KPTCHIKFNEATAILAGDALQSLAFEILQDINCSDIARLKKINKFFAQCCGADGMVGGQQ 153 Query: 148 LSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMNLGI 203 L + +K L++ E LH +KTA +F A + + +++ QN + L +G+ Sbjct: 154 LDIEGENKKLNLEELQILHT--NKTAKMFRACIVLPYILSQNQNDEIENLLVKLADLIGL 211 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 FQ+ DD+LD E+GK +D K T ++ + K Sbjct: 212 CFQIKDDILDVTKTTIELGKTSAKDIHANKSTYVSLMGLEVANK 255 >gi|295688780|ref|YP_003592473.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756] gi|295430683|gb|ADG09855.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756] Length = 299 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 14/273 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L R + + ++Y GKRLRP L T M + + ACA+E IH + Sbjct: 27 LLPRADGPESRLTEAMRYAALGPGKRLRPFFALETGKMFDLAERPVLRAACALECIHAYS 86 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +RRG+ + T++L GD L + AF ++ + + S + Sbjct: 87 LVHDDLPAMDDDDVRRGRPTVHKQYDEATAILAGDALQTAAFEIMAHPDTHDDAHIRSEL 146 Query: 137 ACTLA-EGELRQLSLSKNLDV--TEEDYLHVIKS---KTAVLFSAALEVSSLIAGVQNSV 190 LA R + + +D+ +D V + KT L + A E+ +IA + S Sbjct: 147 VRKLAIASGARGMVGGQMIDILGVRDDLGAVARMQRLKTGALIAFAFEIPLIIARAKESE 206 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI-GEDFRNGKPTLPVILAFQRGTKRE 249 R AL ++ +LG+A+Q+VDD+LD G+ +GK G+D GK +L +R Sbjct: 207 RHALMAFAQDLGLAYQIVDDILDAEGDEKTLGKAAGGKDAAKGKANYVTLLGLDAAKERV 266 Query: 250 KNFWKSTINDGKI---SVENLKKA--FIIMREN 277 + T + +I E+L+++ F++ R N Sbjct: 267 TLLAEQTRSHLEIFGERAEHLRESVDFVLDRRN 299 >gi|77463836|ref|YP_353340.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1] gi|85683255|sp|P54976|CRTE_RHOS4 RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; AltName: Full=Farnesyltranstransferase gi|77388254|gb|ABA79439.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1] Length = 288 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 14/230 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--DDSA 89 Y + GG R+RP L L+ A GD+ L A A+E IH A+L+HDD+ DD+ Sbjct: 33 YAVTPGGARIRPTLLLSVATAC---GDDRPALSDAAAVALELIHCASLVHDDLPCFDDAE 89 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-ACTLAEGELRQL 148 +RRGK + ++L GD L+ F ++ + + AL LV A + G + Sbjct: 90 IRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTALAVRTGMPMGI 149 Query: 149 SLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + + + L ++KT LF AA ++ ++ AG + + + G +G AFQ+ Sbjct: 150 CAGQGWESESQINLSAYHRAKTGALFIAATQMGAIAAGYEA---EPWEELGARIGEAFQV 206 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 DD+ D + +GK G+D + +P + KR K+ I Sbjct: 207 ADDLRDALCDAETLGKPAGQDEIHARPNAVREYGVEGAAKRLKDILGGAI 256 >gi|323484856|ref|ZP_08090212.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum WAL-14163] gi|323401852|gb|EGA94194.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum WAL-14163] Length = 294 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 120/242 (49%), Gaps = 17/242 (7%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 + +++E+V + L + I + + Y + +GGKRLRP+L + G Sbjct: 9 STEEVEQVVYSYLPAEEGHQKTIFEAMNYSVKAGGKRLRPLLMREVYRLFGGTGIEIEPF 68 Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLL-------SQAF 118 AIE IHT++L+HDD+ +D+ RRGK +V+G +VL GD LL ++AF Sbjct: 69 MAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVVYGYDMAVLAGDALLIYAIETAARAF 128 Query: 119 CMVIETKSQEALEALSLVA-----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173 M +Q + + ++A + G+ + L+ L + ++ + + KT L Sbjct: 129 QMT--DNAQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKL-IPKDKLDFIYRLKTGALL 185 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 AA+ + +++AG + + ++ +G+AFQ+ DD+LD +GK + D +N K Sbjct: 186 EAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTSSQEVLGKPVLSDEKNNK 245 Query: 234 PT 235 T Sbjct: 246 TT 247 >gi|294676241|ref|YP_003576856.1| farnesyltranstransferase [Rhodobacter capsulatus SB 1003] gi|117510|sp|P17060|CRTE_RHOCA RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; AltName: Full=Farnesyltranstransferase gi|46003|emb|CAA36538.1| unnamed protein product [Rhodobacter capsulatus SB 1003] gi|46128|emb|CAA77545.1| 289 aa (30 kD) phytoene synthase [Rhodobacter capsulatus] gi|294475061|gb|ADE84449.1| farnesyltranstransferase [Rhodobacter capsulatus SB 1003] gi|227044|prf||1613414G crtE gene Length = 289 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--D 86 + Y +F GG R+RP + ++ AL GD+ + A A+E +H A+L+HDD+ D Sbjct: 30 ALPYGVFPGGARIRPTILVSVALAC---GDDCPAVTDAAAVALELMHCASLVHDDLPAFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 ++ +RRGK + + +VL GD LL + F ++ + + AL L++ +L Sbjct: 87 NADIRRGKPSLHKAYNEPLAVLAGDSLLIRGFEVLADVGAVNPDRALKLIS------KLG 140 Query: 147 QLSLSKNLDVTEE--------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 QLS ++ + D ++KT LF AA ++ ++ AG + + G Sbjct: 141 QLSGARGGICAGQAWESESKVDLAAYHQAKTGALFIAATQMGAIAAGYEA---EPWFDLG 197 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 M +G AFQ+ DD+ D MGK G+D N +P Sbjct: 198 MRIGSAFQIADDLKDALMSAEAMGKPAGQDIANERPN 234 >gi|149195157|ref|ZP_01872248.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2] gi|149134709|gb|EDM23194.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2] Length = 278 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 25/227 (11%) Query: 37 LIFSGGKRLRPMLTLA-----TALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 ++ +GGKR RP L ++ L++ DN A AIE IHT +L+HDD+ +DD+ Sbjct: 26 MLLAGGKRFRPKLLISVVKAYNPLLI----DNAKYAAFAIELIHTYSLIHDDLPAMDDAT 81 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVA--CTLAE 142 LRRG + T++LVGD L + AF ++ + E ++ LS A + Sbjct: 82 LRRGHPTLHTTYDEATAILVGDGLNTYAFEVLSKAPIHNDIKIELIKILSENAGVSGMVL 141 Query: 143 GELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G+ L +K L++ E LH+ +KTA L +A+L++ ++I + + + L +G+ L Sbjct: 142 GQAIDLYFENKKLNLDELKELHI--NKTAKLIAASLKMGAIIVN-KIDLAEKLYDFGIKL 198 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 G+ FQ+ DD+LD E ++GK G D K T IL + K+ Sbjct: 199 GLLFQIQDDLLDLEDET-KIGKTTGVD--ENKNTFVTILGKEESIKK 242 >gi|89093477|ref|ZP_01166425.1| dimethylallyltransferase [Oceanospirillum sp. MED92] gi|89082167|gb|EAR61391.1| dimethylallyltransferase [Oceanospirillum sp. MED92] Length = 293 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 77/269 (28%), Positives = 123/269 (45%), Gaps = 25/269 (9%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ + ++Y +F+GGKR+RP L +L + A AIE IH+ +L+HDD+ Sbjct: 30 LLQESMRYSLFNGGKRVRPALVYLVNQILGGTDEAADNAAAAIECIHSYSLVHDDLPAMD 89 Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-TLAEG-- 143 LRRGK + + T++L GD L AF ++ + Q A + L+ + A G Sbjct: 90 DDDLRRGKPTCHIAYDEATAILAGDALQCLAFELLANDQQQSADSKIKLIQLLSQASGHG 149 Query: 144 --------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--A 193 +LR + L+ E + H KT L A+ + + G + S Q A Sbjct: 150 GMVVGQSFDLRHVGKPLTLEQLEAMHQH----KTGALLLCAVHMGA-ACGPRVSKEQLDA 204 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L Y + +G+AFQ+ DD+LD G+ +GK G D KPT P +L + + Sbjct: 205 LTRYALAIGLAFQVQDDILDIEGDSETIGKPQGSDLELNKPTYPALLGLEGAKLKLTKLH 264 Query: 254 KSTINDGKISVENLKKA-----FIIMREN 277 I I EN + FI+ R++ Sbjct: 265 HEAIEALTIFNENAEPLRALADFIVRRDH 293 >gi|145296134|ref|YP_001138955.1| hypothetical protein cgR_2054 [Corynebacterium glutamicum R] gi|140846054|dbj|BAF55053.1| hypothetical protein [Corynebacterium glutamicum R] Length = 366 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 31/250 (12%) Query: 30 IPDVVKYL---IFSGGKRLRPMLTLATALMLE------YRGDNHVLLACAIEFIHTATLL 80 + D V +L + +GGKR+RP+ A L + R ++ + A ++EFI L+ Sbjct: 40 VTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGLKNSSERLESVLDAAASLEFIQACALI 99 Query: 81 HDDVVDDSALRRG-KVAARLV---------------WGNQTSVLVGDFLLSQAFCMVIET 124 HDD++D S RRG R V +G S+L GD L A M+ ++ Sbjct: 100 HDDIIDSSDTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDMLQDS 159 Query: 125 K-SQEAL----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA-ALE 178 S EAL +A + + G+L + L + + + E V + KTA A L Sbjct: 160 GLSAEALARTRDAWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLH 219 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + IAG + AL YG ++GIAFQL DD+L G+ GK G+D R GK T+ + Sbjct: 220 LGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGDPAITGKPAGDDIREGKRTVLL 279 Query: 239 ILAFQRGTKR 248 LA QR K+ Sbjct: 280 ALALQRADKQ 289 >gi|315122480|ref|YP_004062969.1| geranyltranstransferase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495882|gb|ADR52481.1| geranyltranstransferase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 297 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 101/190 (53%), Gaps = 9/190 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y I GGK +R L A + + + AIE +H +L+HDD+ +D+ + Sbjct: 38 AIRYAIL-GGKNIRSFLVAECASLFGLSNPTVLRVGAAIECVHCYSLIHDDLPSMDNGYI 96 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEA---LSLVACTLAEGEL 145 RRGK L + T++L G+ LL+ AF ++ ET+ ++++ + LSL +G L Sbjct: 97 RRGKPTLHLQYDEATAILAGNSLLTYAFEIICSPETQLKDSIRSELTLSLARNAGIQGML 156 Query: 146 R-QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 Q+ +N + E+ L + + KT L A E ++IA + L+ YG NLGI Sbjct: 157 GGQMLDIQNECLDEKQLLTIQEMKTGSLMRFACEAGAIIAHTNQEEKARLRYYGENLGIV 216 Query: 205 FQLVDDVLDY 214 FQLVDD+LD+ Sbjct: 217 FQLVDDLLDF 226 >gi|149914252|ref|ZP_01902783.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. AzwK-3b] gi|149811771|gb|EDM71604.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. AzwK-3b] Length = 260 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 10/228 (4%) Query: 36 YLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALRR 92 Y GG R+RP + L+ A+ + R D A A+E IH A+L+HDD+ DD+ +RR Sbjct: 3 YATAPGGARIRPTILLSVAMACGDDRPDVSDAAASALELIHCASLVHDDLPCFDDADIRR 62 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE--GELRQLSL 150 GK + + +VL GD L+ AF ++ + A L+ +LAE G + Sbjct: 63 GKPSVHRAFSEPLAVLAGDSLIVLAFEVLARQAITDPARAARLM-TSLAERTGMPGGICA 121 Query: 151 SKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E D +SKT LF AA E+ ++ AG + G +G AFQ+ D Sbjct: 122 GQGWESEPEVDLAAYHRSKTGALFIAATEMGAIAAGHDP---DNWRDLGALIGEAFQVAD 178 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 D+ D + +GK +G+D +G+P L +KR + I Sbjct: 179 DLRDALLDETTLGKPVGQDALHGRPNAVAKLGVDGASKRLSDILAGAI 226 >gi|237730397|ref|ZP_04560878.1| geranyltranstransferase [Citrobacter sp. 30_2] gi|226905936|gb|EEH91854.1| geranyltranstransferase [Citrobacter sp. 30_2] Length = 299 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/265 (27%), Positives = 123/265 (46%), Gaps = 20/265 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYATGQMFGVSLSTLDAPAAAVECIHAYSLMHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG + +G ++L GD L + AF ++ + E + +++++ + Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSIISDAPMPEVTDRDRIAMISELAQASGIAG 153 Query: 148 LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK---SY 197 + + LD+ E + + + KT L AA+ + +L AG + R+ L Y Sbjct: 154 MCGGQALDLEAEGHQVELDALERIHRHKTGALIRAAVRLGALSAG--DKGRECLPILDKY 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L G ++ +N + I Sbjct: 212 AESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQAQNKARDLI 267 Query: 258 NDGKISVENLKKAFIIMRENRALVD 282 D + S+ L + AL D Sbjct: 268 EDARQSLSLLAAQSLDTSALEALAD 292 >gi|315149503|gb|EFT93519.1| geranyltranstransferase [Enterococcus faecalis TX0012] Length = 293 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 25/259 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC------------MVIETKSQEA 129 + LRRGK V+G T++L GD LL+ AF +++ + +A Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKA 143 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +VA + + E ++SL T E+ V + KT L AL ++A Sbjct: 144 AGNQGMVAGQMGDIEGEKVSL------TLEELAAVHEKKTGALIEFALIAGGVLANQTEE 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L + + G+AFQ+ DD+LD ++GK +G D K T P +L G Sbjct: 198 VIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGA 253 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + G +E +K Sbjct: 254 KDALTHQLAKGSAVLEKIK 272 >gi|289167859|ref|YP_003446128.1| farnesyl diphosphate synthase [Streptococcus mitis B6] gi|288907426|emb|CBJ22263.1| farnesyl diphosphate synthase [Streptococcus mitis B6] Length = 291 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 31/254 (12%) Query: 34 VKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL- 90 V Y I +GGKR+RP L L AL + + H +A A+E IHT +L+HDD+ Sbjct: 31 VLYSIHAGGKRIRPFLLLEVLEALHIAIK-PAHAQVAAALEMIHTGSLIHDDLPAMDDDD 89 Query: 91 -RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ---EALEALSLVACTLA--- 141 RRG++ +G ++L GD L + ++ + SQ + + LSL + +L Sbjct: 90 YRRGRLTNHKKFGEAMAILAGDALFLDPYVLIAQADLPSQIKVDLISNLSLASGSLGMVA 149 Query: 142 ------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 EGE + LSL E+ + +KT L + + +++IA + ++ LK Sbjct: 150 GQVLDMEGEHQHLSL--------EELQTIHANKTGKLLAYPFQAAAIIAELAPEMQVKLK 201 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 G +G+AFQ+ DDVLD E+GK +D + K T P +L + F Sbjct: 202 IVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALLGLEEAIA----FCNQ 257 Query: 256 TINDGKISVENLKK 269 T++ +E + + Sbjct: 258 TLDQSNAKLEEIAQ 271 >gi|18143445|dbj|BAB79600.1| crtE [Pantoea agglomerans pv. milletiae] Length = 303 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 125/242 (51%), Gaps = 18/242 (7%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHD 82 S+ +++ ++ + GKR+RP+L L A L LL ACA+E +H A+L+ D Sbjct: 36 SERDLVGAAMRDGALAPGKRIRPLLLLLAARDLGCNATPAGLLDLACAVEMVHAASLILD 95 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALS 134 D+ +DD+ LRRG+ +G ++L LLS+AF +V T +A+ LS Sbjct: 96 DMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSKAFGVVAAAEGLTATARADAVAELS 155 Query: 135 LVACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L +G+ + LS + + + L KT+ LF A+++++S++A R+ Sbjct: 156 HAVGMQGLVQGQFKDLS-EGDKPRSADAILMTNHYKTSTLFCASMQMASIVAEASGEARE 214 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L + +NLG AFQL+DD+ D + + GK+ +D +GK TL +L Q R ++ Sbjct: 215 QLHRFSLNLGQAFQLLDDLTD---GMADTGKDAHQD--DGKSTLVNLLGPQAVETRLRDH 269 Query: 253 WK 254 + Sbjct: 270 LR 271 >gi|116627949|ref|YP_820568.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus LMD-9] gi|116101226|gb|ABJ66372.1| farnesyl-diphosphate synthase [Streptococcus thermophilus LMD-9] gi|312278537|gb|ADQ63194.1| Geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus ND03] Length = 290 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 113/229 (49%), Gaps = 31/229 (13%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 Y + SGGKR+RP++ L +LE G +H +A ++E IHT +L+HDD+ Sbjct: 32 YSVDSGGKRIRPLIFLD---LLEGFGLELTPSHFDIAASLEMIHTGSLIHDDLPAMDDDD 88 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVACTLA--- 141 RRG++ + T++L GD L F +V +T+ + + ALS + T Sbjct: 89 YRRGRLTNHKKFDEATAILAGDSLFLDPFALVAQTELSAEIRVQLIHALSHASGTFGMVG 148 Query: 142 ------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 +GE +L LS+ + E +KT L + + ++A ++ V + L+ Sbjct: 149 GQMLDMKGEGLELDLSQLAKIHE--------NKTGKLLTFPFVAAGIVAQQEDRVMENLQ 200 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G +G+AFQ+ DD+LD + +GK G+D GK T P +L ++ Sbjct: 201 EAGRLIGLAFQVRDDILDVTADFESLGKTPGKDVVAGKSTYPALLGLEK 249 >gi|312864464|ref|ZP_07724695.1| geranyltranstransferase [Streptococcus downei F0415] gi|311099591|gb|EFQ57804.1| geranyltranstransferase [Streptococcus downei F0415] Length = 288 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 23/250 (9%) Query: 12 MEKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNH 64 +EK++ LK ++ P + + Y + +GGKR+RP+L L T LE G H Sbjct: 4 LEKID-AALKEFYEQSQVSPRLMEAILYSVHAGGKRIRPLLLLET---LEGFGIELTKAH 59 Query: 65 VLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +A A+E IHT +L+HDD+ RRG++ + T++L GD L + ++ Sbjct: 60 YQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKQFDEATAILAGDSLFLDPYGLIA 119 Query: 123 ETKSQEALEALSLVA-CTLAEGELRQLSLSKNLDVTEE------DYLHVIKS-KTAVLFS 174 +T ++ AL+L+A + A G ++ + LD+ E D ++ I S KT L + Sbjct: 120 QTDLHPSI-ALALIADLSQASGSFGMVA-GQMLDIEGEEQTLTLDQVYTIHSHKTGKLLA 177 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + L+A +++ L+ G+ +G AFQ+ DD+LD E+GK +D K Sbjct: 178 FPFKAAGLLAQQDSAILAQLEEVGLLVGTAFQVRDDILDVTASFEELGKTPQKDVAAQKA 237 Query: 235 TLPVILAFQR 244 T P +L ++ Sbjct: 238 TYPSLLGLEQ 247 >gi|188590181|ref|YP_001921548.1| geranyltranstransferase [Clostridium botulinum E3 str. Alaska E43] gi|188500462|gb|ACD53598.1| putative geranyltranstransferase [Clostridium botulinum E3 str. Alaska E43] Length = 289 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 13/220 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRG 93 Y + GGKR+RP L + T + + + + +A AIE IHT +L+HDD+ LRRG Sbjct: 34 YSVNIGGKRIRPTLLILTYSLYKDNIEKIMPIAAAIEMIHTYSLIHDDLPCMDDDDLRRG 93 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---SQEALEA-LSLVACTLAEGELRQ-- 147 K V+G +VL GD LL++A +++++ + AL+A + EG + Sbjct: 94 KPTNHKVFGENIAVLAGDALLNEAMTLLMKSSLELGESALKASYEISKAAGPEGMIGGQV 153 Query: 148 ---LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 LS + + E +Y+H + KT L ++ ++A V + +AL YG LG+A Sbjct: 154 VDVLSEVREISKEELEYMH--EKKTGELIRVSIVAGGILANVPSGDIEALNEYGKKLGLA 211 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 FQ+ DD+LD G +GK D K + ++ Sbjct: 212 FQIKDDILDVIGTEETLGKATHRDKELNKTNFITVYGLEK 251 >gi|187931182|ref|YP_001891166.1| geranyl diphosphate synthase/farnesyl diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712091|gb|ACD30388.1| geranyl diphosphate synthase/farnesyl diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] Length = 293 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 18/228 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 + Y FSGGKR+R A L N +A A+E IHT +L+HDD+ +D+ LR Sbjct: 32 MHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKIAFAVESIHTYSLIHDDLPAMDNDTLR 91 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCM--------VIETKSQEALEALSLVACTLAEG 143 RGK + + T++L GD L + AF + + + K L A A + G Sbjct: 92 RGKPTCHIKFNEATAILAGDALQALAFEILQDINYSDIDKLKKINKLFAQYCGASGMVGG 151 Query: 144 ELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS-VRQALKSYGM 199 + QL + +K L + E LH +KTA +F + + +++ QNS + L Sbjct: 152 Q--QLDIEGENKKLKIEELQILHT--NKTAKMFRVCIVLPYILSQNQNSQIEDLLVRLSD 207 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +G+ FQ+ DD+LD NE+GK +D K T ++ + K Sbjct: 208 LIGLCFQIKDDILDVTKTTNELGKTSAKDIDANKSTYVSLMGLKDANK 255 >gi|294013329|ref|YP_003546789.1| geranyltranstransferase [Sphingobium japonicum UT26S] gi|292676659|dbj|BAI98177.1| geranyltranstransferase [Sphingobium japonicum UT26S] Length = 305 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 14/231 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + +++ GGKRLRP+L A + + ++ + + A+E IH +L+HDD+ Sbjct: 45 EAMRHAAMDGGKRLRPLLVQAASDLFNISRESALRVGVAVECIHVYSLVHDDLPAMDDDD 104 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EALEALSLVACT--L 140 +RRGK + T++L GD L AF ++ + ++ E ++AL++ + T + Sbjct: 105 MRRGKPTVHRAFDEATAILAGDCLHDLAFEILADEETHPDPFVRIELVKALAVASGTSGM 164 Query: 141 AEGELRQLSLSK-NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A G++ L K + D+ L +K T L + ++ ++++A + R L Y Sbjct: 165 AGGQMMDLEAEKASFDLPTVTRLQQLK--TGALIAVCVDAAAIMALIPPEGRMRLHGYAR 222 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++G+AFQ+ DD+LD G+ GK +G+D GK T +L +R ++ + Sbjct: 223 DIGLAFQIADDLLDVEGDAVLAGKALGKDAAAGKETFVSLLGVERAREQAR 273 >gi|255262881|ref|ZP_05342223.1| geranylgeranyl pyrophosphate synthetase [Thalassiobium sp. R2A62] gi|255105216|gb|EET47890.1| geranylgeranyl pyrophosphate synthetase [Thalassiobium sp. R2A62] Length = 295 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 16/234 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA----IEFIHTATLLHDDVV--D 86 + Y + GG R+RP + L+ A GD+ LA A +E IH A+L+HDD+ D Sbjct: 30 ALHYAVTPGGARIRPTILLSVASAC---GDDMPKLADAAAAALELIHCASLVHDDLPCFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 D+ RRGK A +G +VL GD L+ AF ++ ++ A+ L+ LAE Sbjct: 87 DADTRRGKPAVHRAFGEPLAVLTGDSLIVMAFTVLTQSAHLHPTRAIELMK-VLAERTGM 145 Query: 147 QLSLSKNLDVTEEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + ED + + ++KT LF AA ++ ++ AG + L G +G Sbjct: 146 PNGICAGQGWESEDQIDLSAYHRAKTGALFIAATQMGAIAAGQDGAPWDEL---GARIGE 202 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 AFQ+ DD+ D + +GK +G+D +G+P L + R K+ I Sbjct: 203 AFQVADDLRDALYDQATLGKPVGQDDLHGRPNAVAELGVEGAIARMKDILSGAI 256 >gi|254490429|ref|ZP_05103615.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010] gi|224464173|gb|EEF80436.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010] Length = 288 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/231 (33%), Positives = 114/231 (49%), Gaps = 19/231 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDVVDDS 88 + ++Y GGKRLR +L AT E G N V L A A+E IH +L+HDD+ Sbjct: 29 EAMRYATLGGGKRLRALLVYATG---EAMGANPVALDAAAAAVEMIHAYSLVHDDMPIMD 85 Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETKSQEALEALSLV----ACT 139 LRRG+ + T++LVGD L + AF C T +Q+ L L A Sbjct: 86 DDDLRRGRPTCHKAFDEATALLVGDALQTMAFETLCDNSLTAAQQVLMIKRLAQASGAFG 145 Query: 140 LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSY 197 +A G+ L S+ K LD+ +H K KT L A++ + +L A + Q L+ Y Sbjct: 146 MAGGQAVDLESVGKKLDLNALQSMH--KLKTGALIRASVLLGALAASDYDDETLQRLERY 203 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +G+AFQ+ DDVLD + +GK G D KPT P +L ++ ++ Sbjct: 204 ADCIGLAFQVQDDVLDVIADTETLGKAQGADIALNKPTYPALLGLEKAQQK 254 >gi|22296798|gb|AAM94362.1| geranylgeranyl pyrophosphate synthase [Agromyces mediolanus] Length = 369 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 113/245 (46%), Gaps = 41/245 (16%) Query: 40 SGGKRLRPMLTLATALMLEYRG----------------DNHVLLACAIEFIHTATLLHDD 83 SGGKR+RP L L L +G V LA A E +HTA L+HDD Sbjct: 50 SGGKRIRPRLVLGAYDALAAQGAPASGRERADAEPAAAAEAVALAAAFELLHTAFLVHDD 109 Query: 84 VVDDSALRRGK--VAARLV---------------WGNQTSVLVGDFLLSQAFCMVIETKS 126 V+D +RRG+ VA R +G +++L GD L++ A + + Sbjct: 110 VIDRDLVRRGEPNVAGRFALDAALRGLERERADAYGQASAILAGDLLIAAAHSVAAASTC 169 Query: 127 QEAL---EALSLVACTLAE--GELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVS 180 + + + SL C A GE + + + E D L +I+ KTA FSA L Sbjct: 170 RSSAGEPSSPSLTKCVFAAAAGEHADVRHAAGVRPGEADILAMIEDKTACYSFSAPLRAG 229 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+AG + + L G LG+AFQL DDVL G+ GK D R GK TL ++ Sbjct: 230 ALLAGAPRATVERLGEIGRRLGVAFQLQDDVLGVYGDERVTGKTALGDLREGKETL--LI 287 Query: 241 AFQRG 245 A+ RG Sbjct: 288 AYARG 292 >gi|270157822|ref|ZP_06186479.1| geranyltranstransferase [Legionella longbeachae D-4968] gi|289163911|ref|YP_003454049.1| geranyltranstransferase [Legionella longbeachae NSW150] gi|269989847|gb|EEZ96101.1| geranyltranstransferase [Legionella longbeachae D-4968] gi|288857084|emb|CBJ10899.1| geranyltranstransferase [Legionella longbeachae NSW150] Length = 293 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 115/240 (47%), Gaps = 24/240 (10%) Query: 20 LKRICSDVE----MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEF 73 LK++ +D +I + Y +F GGKR+RP+L T +L+ D ++L +A A+E Sbjct: 13 LKQVIADSSVPAVIIRSAIDYSLFPGGKRIRPILVYLTGSLLDV--DLNILDAIAAAVEL 70 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETKSQEAL 130 H +L+HDD+ +D+ LRRG+ + + T++L GD + QA + V+ T + Sbjct: 71 THCYSLIHDDLPAMDNDDLRRGRPSCHKAFDEATAILAGDGM--QALAIDVLLTYLPHLV 128 Query: 131 EALSLVACT-----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + +++ T + G+ LS + +E + KT L A +E+ Sbjct: 129 QPDRIISITRELVQATGISGMVSGQSLDLSELAKSSIDDERLKEIHHLKTGRLILACIEM 188 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 I + + AL++Y ++G+ FQ+ DD LDY +GK D N K T + Sbjct: 189 VLRIQSTPEAYQSALRTYANHIGLVFQMQDDYLDYHAPAEFLGKGRSSDLANKKTTFATL 248 >gi|313683408|ref|YP_004061146.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994] gi|313156268|gb|ADR34946.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994] Length = 282 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 33/279 (11%) Query: 12 MEKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL- 67 ME+ + + S P + ++ ++ GGKR RP L L R N +L+ Sbjct: 1 MEQFETFLGSHLPSAPSFHPHYENSLRQMLIGGGKRFRPALLLGVV-----RAYNPLLIQ 55 Query: 68 -----ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 A AIE +HT +L+HDD+ +D++ LRRG + +++L GD L + AF + Sbjct: 56 SAYHAALAIELLHTYSLIHDDLPAMDNADLRRGIPTLHKTYDEVSAILAGDALNTYAFEV 115 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY---------LHVIKSKTAV 171 + + + + L+ G + L + +D E++ LH+ KT Sbjct: 116 LSNAPFADRV-IVKLIRSLAHNGGAEGMVLGQAIDCHFENFRLELDQVKMLHI--HKTGK 172 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L +AAL++ + I G ++ + Q L +G++LG+ FQ+ DD+LD + GK D Sbjct: 173 LIAAALQMGAFIVG-RDDMAQELYDFGIDLGLLFQIQDDILDVTQNEIQAGKTTNND--Q 229 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISV-ENLKK 269 K + +L F+R + E N IN S ENL++ Sbjct: 230 AKNSFVTLLGFERAME-EANILADKINRQMTSFDENLQR 267 >gi|296136077|ref|YP_003643319.1| Polyprenyl synthetase [Thiomonas intermedia K12] gi|295796199|gb|ADG30989.1| Polyprenyl synthetase [Thiomonas intermedia K12] Length = 324 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 22/241 (9%) Query: 14 KVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LA 68 + LI + + + ++P + + Y GGKR+RP+L A ++ D+ L A Sbjct: 36 RAQQLIERFVPPEHPLVPQLHEAMHYAAAMGGKRVRPLLVWAAGECVQ--ADDQALDRAA 93 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETK 125 CA+E +H +L+HDD+ +DD LRRG+ + +G ++L GD L + A+ + E Sbjct: 94 CAVELVHAYSLVHDDLPCMDDDVLRRGQPTTHVQFGEALALLAGDALQALAYEVLTPEAD 153 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALE 178 AL+A A G ++ + LD V+ +D +H+ KT L A++ Sbjct: 154 IAPALQARLCALLARASGA-DGMAGGQTLDILATGGAVSGDDLMHMHSRKTGALLKASVL 212 Query: 179 VSSLIAGVQNS----VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + G + AL++YG +G+AFQ+VDD+LD + + +GK G+D + K Sbjct: 213 MGAACGGFDTARPAQTYTALETYGDAVGLAFQVVDDILDVTADSHTLGKTAGKDAQQNKS 272 Query: 235 T 235 T Sbjct: 273 T 273 >gi|170767787|ref|ZP_02902240.1| geranyltranstransferase [Escherichia albertii TW07627] gi|170123275|gb|EDS92206.1| geranyltranstransferase [Escherichia albertii TW07627] Length = 299 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 22/266 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L A M A A+E IH +L+HDD+ Sbjct: 34 ETMQYGALLGGKRLRPFLVYAIGQMFGVSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVA-----CT 139 LRRG + +G ++L GD L + AF ++ E ++ L +S +A Sbjct: 94 LRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRLAMISELANASGIAG 153 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK---S 196 + G+ L ++ V E + + KT L AA+ + +L AG + R AL Sbjct: 154 MCGGQALDLD-AEGKQVPLEALERIHRHKTGALIRAAVRLGALSAGEKG--RNALPILDK 210 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y ++G+AFQ+ DD+LD G+ +GK G D + GK T P +L ++ K+ ++ Sbjct: 211 YAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL---- 266 Query: 257 INDGKISVENLKKAFIIMRENRALVD 282 I+D + S+ L + + AL D Sbjct: 267 IDDARQSLSQLAEQSLDTSALEALAD 292 >gi|253578524|ref|ZP_04855796.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850842|gb|EES78800.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 295 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 120/242 (49%), Gaps = 15/242 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + + Y + +GGKRLRPML T + + + + +E IHT +L+HDD+ Sbjct: 32 MAQAMNYSMLAGGKRLRPMLIRETYRLFDGKEEVVKPFMAGMEMIHTHSLIHDDLPALDD 91 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQE-ALEALSLVAC-TLA 141 RRG++ V+G VL G LL+ A+ + + TK Q+ + AL +V+ T Sbjct: 92 DDYRRGRLTTHKVYGEAMGVLSGVALLNYAYETMFQAFALTKEQDRVIHALRVVSQKTGI 151 Query: 142 EGELRQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 G L S+ K L+ DY++ ++KT+ L A++ +++AG A++ Sbjct: 152 HGMLGGQSVDVENDGKPLEKEMLDYIY--RNKTSALIEASMMTGAILAGANEQEVSAVEK 209 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 N+G+AFQ+ DD+LD E+GK + D +N K T + ++ ++ + + Sbjct: 210 AAGNIGLAFQIQDDILDVTSTAEELGKPVHSDEKNNKVTYVTLFGTEKAAEQVEELSEKA 269 Query: 257 IN 258 I+ Sbjct: 270 ID 271 >gi|92430262|gb|ABE77350.1| CrtE [Pantoea sp. C1B1Y] Length = 303 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 125/242 (51%), Gaps = 18/242 (7%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHD 82 S+ +++ ++ + GKR+RP+L L A L LL ACA+E +H A+L+ D Sbjct: 36 SERDLVGAAMRDGALATGKRIRPLLLLLAARDLGCNATPAGLLDLACAVEMVHAASLILD 95 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKSQEALEALS 134 D+ +DD+ LRRG+ +G ++L LLS+AF +V T +A+ LS Sbjct: 96 DMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSKAFGVVAAAEGLTATTRADAVAELS 155 Query: 135 LVACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L +G+ + LS + + + L KT+ LF A+++++S++A R+ Sbjct: 156 HAVGMQGLVQGQFKDLS-EGDKPRSADAILMTNHYKTSTLFCASMQMASIVAEASGEARE 214 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L + +NLG AFQL+DD+ D + + GK+ +D +GK TL +L Q R ++ Sbjct: 215 QLHRFSLNLGQAFQLLDDLTD---GMADTGKDAHQD--DGKSTLVNLLGPQAVETRLRDH 269 Query: 253 WK 254 + Sbjct: 270 LR 271 >gi|300859805|ref|ZP_07105893.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11] gi|300850623|gb|EFK78372.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11] gi|315144365|gb|EFT88381.1| geranyltranstransferase [Enterococcus faecalis TX2141] Length = 293 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 25/259 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VLLACAIEFIHTATLLHDD 83 ++ E + + + Y I +GGKRLRP+L L T + + +A ++E IHT +L+HDD Sbjct: 24 TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDD 83 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFC------------MVIETKSQEA 129 + LRRGK V+G T++L GD LL+ AF +++ + +A Sbjct: 84 LPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKA 143 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +VA + + E ++SL T E+ V + KT L AL ++A Sbjct: 144 AGNQGMVAGQMGDIEGEKVSL------TLEELAAVHEKKTGALIEFALIAGGVLANQTEE 197 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V L + + G+AFQ+ DD+LD ++GK +G D K T P +L G Sbjct: 198 VIGLLTLFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALNKSTYPALL----GIAGA 253 Query: 250 KNFWKSTINDGKISVENLK 268 K+ + +G +E +K Sbjct: 254 KDALTHQLAEGSAVLEKIK 272 >gi|156973484|ref|YP_001444391.1| geranyltranstransferase [Vibrio harveyi ATCC BAA-1116] gi|156525078|gb|ABU70164.1| hypothetical protein VIBHAR_01174 [Vibrio harveyi ATCC BAA-1116] Length = 294 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 20/255 (7%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L+++ + + +KY + GGKR+RP L T ML + ++ A AIE IH +L Sbjct: 20 LEQLPHQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAIECIHAYSL 79 Query: 80 LH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQEALE 131 +H +DD LRRG+ + + T++L GD L + AF ++ E ++Q Sbjct: 80 IHDDLPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAFTILAEGALNPNAENQRIKM 139 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIA 184 +L + A G + L + LD+ E D + ++KT L + A+++ +L A Sbjct: 140 VQALAQASGAGG----MCLGQALDLGAENRRVSLADLEEIHRNKTGALINCAVKLGALAA 195 Query: 185 GVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G + V L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L + Sbjct: 196 GEKGLEVLPHLERYSKAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLLGLE 255 Query: 244 RGTKREKNFWKSTIN 258 ++ + + Sbjct: 256 GAMEKAHTLLQEALQ 270 >gi|281491351|ref|YP_003353331.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus lactis subsp. lactis KF147] gi|281375092|gb|ADA64610.1| Dimethylallyltransferase/geranyltranstransferase [Lactococcus lactis subsp. lactis KF147] Length = 285 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 108/234 (46%), Gaps = 23/234 (9%) Query: 30 IPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 + + KY + +GGKR+RP+L L A LE H +A A+E IHT +L+HDD+ + Sbjct: 25 LAESAKYSLLAGGKRIRPLLFLNLLEAFDLELS-KAHYHVAAALEMIHTGSLIHDDLPAM 83 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT----LA 141 D+ RRG++ + T++L GD L F ++ S L A +VA T A Sbjct: 84 DNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFIL----STADLSAEIIVALTRELAFA 139 Query: 142 EGE--------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 G L K L + E + +H + KT L + + ++A + Sbjct: 140 SGSYGMVAGQILDMAGEGKELTLAEIEQIH--RLKTGRLLTFPFVAAGIVAQKSTDEVEK 197 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 L+ G LG+AFQ+ DD+LD E+GK G+D K T L + K Sbjct: 198 LRQVGQILGLAFQIRDDILDVTATFAELGKTPGKDILEEKSTYVAHLGLEEAKK 251 >gi|262368900|ref|ZP_06062229.1| polyprenyl synthetase [Acinetobacter johnsonii SH046] gi|262316578|gb|EEY97616.1| polyprenyl synthetase [Acinetobacter johnsonii SH046] Length = 303 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 20/243 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 E + V + + GGKR+RP L ATA L A A+E IH +L HDD+ Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATAHLNPNNNAAAVRRAAVAVELIHCYSLAHDDLPC 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----------CMVIETKSQEALEAL 133 +D+ LRRG+ + +G T++L GD L S AF +V + + ++ L Sbjct: 94 MDNDLLRRGQPTCHVAYGEDTALLAGDILQSMAFEILGSRLFDAGPVVDQGIVLKQMQIL 153 Query: 134 SLVACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA--GVQNSV 190 + + + G++ L K +D T + +H ++KT L SAA+ ++++ G ++ Sbjct: 154 ATASSKMVCGQVLDLQAEGKRVDQTALENIH--RNKTGALISAAVMMAAVTVFDGCDQAI 211 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ Y +G+AFQ+ DD+LD + +GK G+D + K T P ++ + K Sbjct: 212 PK-LREYAQAIGLAFQVQDDILDIISNTDVLGKTAGKDEQVEKSTYPALMGLESAQDYAK 270 Query: 251 NFW 253 Sbjct: 271 TLH 273 >gi|290790316|pdb|3LVS|A Chain A, Crystal Structure Of Farnesyl Diphosphate Synthase From Rhodobacter Capsulatus Sb1003 gi|290790317|pdb|3LVS|B Chain B, Crystal Structure Of Farnesyl Diphosphate Synthase From Rhodobacter Capsulatus Sb1003 Length = 298 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D + Y GGKRLR L + +A + + A A+E +H +L+HDD+ +D+ Sbjct: 33 DAMAYAA-QGGKRLRAFLAIESAAIHGISMAQAMPAALAVEALHAYSLVHDDMPCMDNDD 91 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CM--VIETKSQEALEALSLVACTLAEGEL 145 LRRG W + T+VL GD L + AF C V+ + +L + AEG + Sbjct: 92 LRRGLPTVHKKWDDATAVLAGDALQTLAFELCTDPVLGSAENRVALVAALAQASGAEGMV 151 Query: 146 RQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +L + + +T ++ + + KT L S A + +++AG R L +Y Sbjct: 152 YGQALDIAAETAAVPLTLDEIIRLQAGKTGALISFAAQAGAILAGAD---RGPLTAYATA 208 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 LG+AFQ+ DD+LD G GK +G+D K T +L R + Sbjct: 209 LGLAFQIADDILDVEGNEEAAGKRLGKDAEAHKATFVSLLGLAGAKSRAAD 259 >gi|251777602|ref|ZP_04820522.1| putative geranyltranstransferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243081917|gb|EES47807.1| putative geranyltranstransferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 289 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 13/220 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRG 93 Y + GGKR+RP L + T + + + + +A AIE IHT +L+HDD+ LRRG Sbjct: 34 YSVNIGGKRIRPTLLILTYSLYKDNIEKIMPMAAAIEMIHTYSLIHDDLPCMDDDDLRRG 93 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---SQEALEA-LSLVACTLAEGELRQ-- 147 K V+G +VL GD LL++A +++++ + AL A + EG + Sbjct: 94 KPTNHKVFGENIAVLAGDALLNEAMTLLMKSSLELGESALRASYEISKAAGPEGMIGGQI 153 Query: 148 ---LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 LS + + E +Y+H + KT L ++ ++A V + +AL YG LG+A Sbjct: 154 VDVLSEVREISKEELEYMH--EKKTGELIRVSIVAGGILANVPSGDIEALNEYGKKLGLA 211 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 FQ+ DD+LD G +GK D K + ++ Sbjct: 212 FQIKDDILDVIGTEETLGKATHRDKELNKTNFITVYGLEK 251 >gi|115373108|ref|ZP_01460410.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca DW4/3-1] gi|115369864|gb|EAU68797.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca DW4/3-1] Length = 401 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 106/220 (48%), Gaps = 18/220 (8%) Query: 43 KRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVA- 96 KRLRP+L +A + RG V A +E +HT L+HDDV D + LRRG A Sbjct: 105 KRLRPVLVVAGYHLT--RGGAGVPPGLWQFAAGLELLHTFLLIHDDVADRADLRRGGAAL 162 Query: 97 ----ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS--LVAC-TLAEGELRQLS 149 A G +V+VGD L ++A ++ + + A +A L C A G+ L Sbjct: 163 HHLLAPGRAGEDLAVVVGDHLFARAMEAMLGSGLRGAAKACQYYLAVCRHTAAGQYLDLD 222 Query: 150 LSKNL--DVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 LS+ DV L V KTA F A L +++A ++ Q L+ G G+A+Q Sbjct: 223 LSRAALADVGLFQALRVAHLKTARYGFCAPLVCGAILAEADEALCQGLERVGRYGGLAYQ 282 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 L DDVL G+ GK DF GK T PV+ A+ R + Sbjct: 283 LRDDVLGLFGDARMSGKAGDSDFSQGKRTFPVLAAYARAS 322 >gi|187932330|ref|YP_001886591.1| geranyltranstransferase [Clostridium botulinum B str. Eklund 17B] gi|187720483|gb|ACD21704.1| putative geranyltranstransferase [Clostridium botulinum B str. Eklund 17B] Length = 289 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 11/219 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRG 93 Y + GGKR+RP+L + T + + + + +A AIE IHT +L+HDD+ LRRG Sbjct: 34 YSVNIGGKRIRPILLILTYSLYKDNIEKIMPMAAAIEMIHTYSLIHDDLPCMDDDDLRRG 93 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETK---SQEALEA---LSLVACT--LAEGEL 145 K V+G +VL GD LL++A +++++ + AL+A +S A + G++ Sbjct: 94 KPTNHKVFGENIAVLAGDALLNEAMTLLMKSSLELGESALKASYEISKAAGPEGMIGGQV 153 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + LS+ ++++E+ ++ + KT L ++ ++A V + +AL YG LG+AF Sbjct: 154 VDV-LSEVSEISKEELEYMHEKKTGELIRVSIVAGGILARVPSGDIEALNEYGKKLGLAF 212 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Q+ DD+LD G +GK D K + ++ Sbjct: 213 QIKDDILDVIGTKETLGKATNRDKELNKTNFITVYGLEK 251 >gi|318604611|emb|CBY26109.1| octaprenyl-diphosphate synthase; Dimethylallyltransferase; Geranyltranstransferase (farnesyldiphosphate synthase); Geranylgeranyl pyrophosphate synthetase [Yersinia enterocolitica subsp. palearctica Y11] Length = 306 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 26/269 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M + A AIE IH +L+HDD+ Sbjct: 41 EAMRYGAVLGGKRLRPYLVYATGQMFGLSLTSLDAPAAAIECIHAYSLIHDDLPAMDDDD 100 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVA--------CT 139 LRRG+ + +G ++L GD L + AF ++ E + + LS++A Sbjct: 101 LRRGQPTCHVKFGEANAILAGDALQTLAFSILAEAPMPDVADKDRLSMIAELAHASGVAG 160 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK---S 196 + G+ L+ +++ +T +D + + KT L AA V R+AL Sbjct: 161 MCGGQALDLA-AESRQITLDDLEKIHRHKTGALIRAA--VRLGALAAGALGREALPLLDR 217 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y +G+AFQ+ DD+LD G+ +GK G D ++GK T P ++ + + ++ Sbjct: 218 YANAIGLAFQVQDDILDVIGDTATIGKRQGSDQQHGKSTYPALMGLDCAKAKAIDLYQEA 277 Query: 257 IND-GKISVENLKKA-------FIIMREN 277 ++ +S ++ A FII R+N Sbjct: 278 LSALNALSAQSYNTAPLQALACFIIERDN 306 >gi|154251236|ref|YP_001412060.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1] gi|154155186|gb|ABS62403.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1] Length = 302 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 19/276 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L R+ I + ++Y GGKR RP L +A + + + A A E +H + Sbjct: 29 LLPRVEGPEARIAEAMRYAALGGGKRFRPFLVAQSAALFGVASEAALRAAAAAECVHIYS 88 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----- 131 L+HDD+ LR G A + T+VL GD LL+ AF ++ + ++ E Sbjct: 89 LVHDDLPCMDDDDLRHGLPAVHRQFDEATAVLAGDALLTLAFEILADPETHERARVRIEL 148 Query: 132 ----ALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A++ A + G++ L S + LD+ L +K T L S + E +++ Sbjct: 149 VRRLAIASGAHGMVGGQIIDLTSEGRELDMGGITRLQQLK--TGALISFSCEAGAILGRA 206 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-- 244 AL +Y ++G+A+Q+ DD+LD G+ MGK G+D GK T IL R Sbjct: 207 SPDALHALHAYAHDMGLAYQIADDILDAEGDAAAMGKATGKDAAAGKATFVSILGLDRAR 266 Query: 245 ---GTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 G E+ + D + + F+I R N Sbjct: 267 AQAGMLAEQAVQHLDLFDERADLLRHAAHFVITRRN 302 >gi|253573826|ref|ZP_04851169.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251847354|gb|EES75359.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 799 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 12/235 (5%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLL 80 + ++ ++ D Y + GKRLRP+L + + Y D L L A+E++HTA+L+ Sbjct: 532 LITEDPLLVDTANYSLEGSGKRLRPILAWVMGVQV-YGLDPAALSPLFRALEYMHTASLI 590 Query: 81 HDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLS-----QAFCMVIETKSQEAL-EA 132 DD+ D+S RRGK V + + L G FL+ QA + +S AL + Sbjct: 591 FDDLPSQDNSPSRRGKPTLHEVHNSAIAELTGIFLIQKAVEEQASLKGFDNESVLALLQY 650 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 LS A + G+ L+ +K +T E+ + KT + F A L +++A + Sbjct: 651 LSRKAGEICMGQAMDLN-AKGKVLTVEELDRICFYKTGIAFEACLVAPAILARANETEIA 709 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 LK++ + GIAFQ+ DD+LD G+ +GK G+D NG T +L K Sbjct: 710 VLKNFAYHTGIAFQIKDDLLDGEGDPRLLGKPTGKDIENGSSTYVTVLGTAEANK 764 >gi|78776538|ref|YP_392853.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251] gi|78497078|gb|ABB43618.1| farnesyl-diphosphate synthase [Sulfurimonas denitrificans DSM 1251] Length = 282 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 115/225 (51%), Gaps = 24/225 (10%) Query: 16 NFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLA-----TALMLEYRGDNHVLL 67 NFL L + + + P + V+ ++ +GGKR RP L L LM+ G H Sbjct: 6 NFL-LNHLPASKSIHPTYEEAVQKMLIAGGKRFRPALLLGVVNAYNPLMI--GGAYHA-- 60 Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A AIE +HT +L+HDD+ +D+S LRRG+ +++ T++L GD L + AF V+ Sbjct: 61 AYAIELLHTYSLIHDDLPAMDNSPLRRGEPTLHVLFDEVTAILAGDALNTYAF-EVLSNA 119 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI-------KSKTAVLFSAALE 178 + L+ G L + L + +D E+ + I +KTA L +A+L+ Sbjct: 120 PFSDFTRVELIRELATNGGLNGMVLGQAIDCYFENRVLSIDDVKILHTNKTAKLIAASLK 179 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 + ++I G + + + L +G+ LG+ FQ+ DD+LD E GK Sbjct: 180 MGAIIVG-EEKLAETLYDFGIKLGLLFQIQDDILDVTQSSQEAGK 223 >gi|310824306|ref|YP_003956664.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca DW4/3-1] gi|309397378|gb|ADO74837.1| Geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca DW4/3-1] Length = 366 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 106/220 (48%), Gaps = 18/220 (8%) Query: 43 KRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVA- 96 KRLRP+L +A + RG V A +E +HT L+HDDV D + LRRG A Sbjct: 70 KRLRPVLVVAGYHLT--RGGAGVPPGLWQFAAGLELLHTFLLIHDDVADRADLRRGGAAL 127 Query: 97 ----ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS--LVAC-TLAEGELRQLS 149 A G +V+VGD L ++A ++ + + A +A L C A G+ L Sbjct: 128 HHLLAPGRAGEDLAVVVGDHLFARAMEAMLGSGLRGAAKACQYYLAVCRHTAAGQYLDLD 187 Query: 150 LSKNL--DVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 LS+ DV L V KTA F A L +++A ++ Q L+ G G+A+Q Sbjct: 188 LSRAALADVGLFQALRVAHLKTARYGFCAPLVCGAILAEADEALCQGLERVGRYGGLAYQ 247 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 L DDVL G+ GK DF GK T PV+ A+ R + Sbjct: 248 LRDDVLGLFGDARMSGKAGDSDFSQGKRTFPVLAAYARAS 287 >gi|325000136|ref|ZP_08121248.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1] Length = 382 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/304 (27%), Positives = 125/304 (41%), Gaps = 45/304 (14%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRG------DNH---VLLACA-IEFIHTATLLHDDVVD 86 + GGKRLRP +RG +H VL A A +E I L+HDD++D Sbjct: 65 FVLGGGKRLRPTFA-----WWGWRGAGGDPGSDHAQAVLTAVASLELIQACALVHDDLMD 119 Query: 87 DSALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQAFC-------MVIE 123 S+ RRG+ + W G ++LVGD L+Q + + + Sbjct: 120 ASSTRRGRPTVHVEFARTHAANDWSGPPARFGAAVAILVGD--LAQVWADDMFHSAALPD 177 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSL 182 A E + + G+ + + D E L + + KTA L + + Sbjct: 178 GAHGRAAEPWRAMRTEVLAGQYLDVLAQASGDTAESTALQIDRFKTAAYTVERPLHLGAA 237 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 IAG + V A + YG ++G+AFQL DD+L G+ GK G+D R GK TL V Sbjct: 238 IAGAEPQVVNAYRRYGADIGVAFQLRDDLLGVFGDPRVTGKPAGDDLREGKRTLLVAAGL 297 Query: 243 QRGTKREKNFWKSTI----NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 QR +R I D + + L +A + E A+ E R + A D+L Sbjct: 298 QRAEQRGDPAAHEAITAALGDPGLPDDALDRARSALAELGAVQAVEQRIAALTGSALDAL 357 Query: 299 RCLP 302 P Sbjct: 358 DAAP 361 >gi|121534498|ref|ZP_01666321.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1] gi|121306991|gb|EAX47910.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1] Length = 221 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 104/189 (55%), Gaps = 13/189 (6%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 ++ R +E + + ++Y +F+GGKRLRP+L +A A + RG ++ +AC +E IHT + Sbjct: 22 LVPRQAGYLETVYEAMRYSLFAGGKRLRPILLMAAADAVGGRGSQYLHVACGLEMIHTYS 81 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +D+ RRGK + V+G ++L GD LL+ AF +++ E L +V Sbjct: 82 LIHDDLPAMDNDDFRRGKPTSHRVFGEGMAILAGDGLLTAAFEVMLSQPGVEPGVLLKVV 141 Query: 137 --------ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + G+ L+ K LD ++H ++KT LF AAL +L+AG Sbjct: 142 REIAQAAGPAGMVGGQAVDLAAEGKVLDADALKFMH--QAKTGALFRAALRAGALLAGGS 199 Query: 188 NSVRQALKS 196 NS +AL + Sbjct: 200 NSQIEALTA 208 >gi|148552951|ref|YP_001260533.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1] gi|148498141|gb|ABQ66395.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1] Length = 297 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 11/237 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ GGKRLRP+L A+A + + + AIE IH +L+HDD+ L Sbjct: 37 AMRHAAIGGGKRLRPLLACASARLFAVDPECALRAGLAIEAIHVYSLIHDDLPAMDDDDL 96 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVACTLAEGELRQLS 149 RRG+ + T++L GD + AF + E + LVA A + Sbjct: 97 RRGRPTVHRAYDEATAILAGDGFQALAFEIAASEATHPDPFVRSELVAALAAAAGPAGMV 156 Query: 150 LSKNLDVTEE-------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + +D+ E D + ++ KT L ++E +++ V R L++Y +L Sbjct: 157 GGQAMDMAAEAGGEHDLDAISRLQQLKTGALIGFSIEAGAILGRVPPEGRTKLRAYAHDL 216 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 G+AFQ+ DD+LD G+ MGK G+D GK T +L R + + + I+ Sbjct: 217 GLAFQIADDLLDAEGDPAAMGKAAGKDHAAGKATFVGLLGVDRARAQARLLSQQAID 273 >gi|148394|gb|AAA21260.1| CrtE [Pantoea agglomerans] Length = 302 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 18/212 (8%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDDSALRRGKVAA 97 GKR+RPML L TA L + LL ACA+E +H A+L+ DD+ +DD+ + G+ Sbjct: 52 GKRIRPMLLLLTARDLGCAVSHEGLLDIACAVEMVHAASLILDDMPCMDDAQIVGGRPTV 111 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACT-----LAEGELRQLS 149 +G ++L LLS+AF ++ + AL A+S ++ L +G+ + LS Sbjct: 112 HCQYGEHVAILAAVALLSKAFGVIADADGLTALAKNRAVSELSNAIGMQGLVQGQFKDLS 171 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E L KT+ LF A+++++S++A + R L + ++LG AFQL+D Sbjct: 172 -EGDKRRSAEAILMTNHFKTSTLFCASMQMASIVANASSERRDYLHRFSLDLGQAFQLLD 230 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 D+ D + + GK+I +D GK TL +L Sbjct: 231 DLTDG---MADTGKDINQD--EGKSTLVNLLG 257 >gi|327482340|gb|AEA85650.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166] Length = 295 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 16/230 (6%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 +E + ++Y + +GGKR+RP+L A L + ACA+E IH +L+HDD+ Sbjct: 28 LERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKTDADGAACAVELIHAYSLVHDDLPA 87 Query: 87 DSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVA----- 137 LRRG+ + ++L GD L S AF + E Q+A L + A Sbjct: 88 MDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQAEHNPQDAALRLRMFAVLARA 147 Query: 138 ---CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G+ L S+ LD + +H + KT L A++++ +L +G ++ A Sbjct: 148 AGPAGMVGGQAIDLGSVGLKLDRDALELMH--RHKTGALIEASVQLGALASGRADADNLA 205 Query: 194 -LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 L Y +G+AFQ+ DD+LD + +GK+ G D KPT P +L Sbjct: 206 SLSQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGM 255 >gi|22124916|ref|NP_668339.1| geranyltranstransferase [Yersinia pestis KIM 10] gi|45440604|ref|NP_992143.1| geranyltranstransferase [Yersinia pestis biovar Microtus str. 91001] gi|108808661|ref|YP_652577.1| geranyltranstransferase [Yersinia pestis Antiqua] gi|108811077|ref|YP_646844.1| geranyltranstransferase [Yersinia pestis Nepal516] gi|145600070|ref|YP_001164146.1| geranyltranstransferase [Yersinia pestis Pestoides F] gi|149364978|ref|ZP_01887013.1| geranyltranstransferase [Yersinia pestis CA88-4125] gi|162421705|ref|YP_001607439.1| geranyltranstransferase [Yersinia pestis Angola] gi|165926609|ref|ZP_02222441.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. F1991016] gi|165935882|ref|ZP_02224452.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. IP275] gi|166011123|ref|ZP_02232021.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213125|ref|ZP_02239160.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. B42003004] gi|167398812|ref|ZP_02304336.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421520|ref|ZP_02313273.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423513|ref|ZP_02315266.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470229|ref|ZP_02334933.1| geranyltranstransferase [Yersinia pestis FV-1] gi|218930206|ref|YP_002348081.1| geranyltranstransferase [Yersinia pestis CO92] gi|229838781|ref|ZP_04458940.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896065|ref|ZP_04511235.1| geranyltranstransferase [Yersinia pestis Pestoides A] gi|229899349|ref|ZP_04514492.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229901304|ref|ZP_04516426.1| geranyltranstransferase [Yersinia pestis Nepal516] gi|270489496|ref|ZP_06206570.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294504904|ref|YP_003568966.1| geranyltranstransferase [Yersinia pestis Z176003] gi|21957753|gb|AAM84590.1|AE013704_7 geranyltranstransferase [Yersinia pestis KIM 10] gi|45435461|gb|AAS61020.1| geranyltranstransferase [Yersinia pestis biovar Microtus str. 91001] gi|108774725|gb|ABG17244.1| farnesyl-diphosphate synthase [Yersinia pestis Nepal516] gi|108780574|gb|ABG14632.1| farnesyl-diphosphate synthase [Yersinia pestis Antiqua] gi|115348817|emb|CAL21771.1| geranyltranstransferase [Yersinia pestis CO92] gi|145211766|gb|ABP41173.1| farnesyl-diphosphate synthase [Yersinia pestis Pestoides F] gi|149291391|gb|EDM41465.1| geranyltranstransferase [Yersinia pestis CA88-4125] gi|162354520|gb|ABX88468.1| geranyltranstransferase [Yersinia pestis Angola] gi|165916027|gb|EDR34634.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. IP275] gi|165921537|gb|EDR38734.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990123|gb|EDR42424.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205912|gb|EDR50392.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960439|gb|EDR56460.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051316|gb|EDR62724.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057683|gb|EDR67429.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681233|gb|EEO77327.1| geranyltranstransferase [Yersinia pestis Nepal516] gi|229687751|gb|EEO79824.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229695147|gb|EEO85194.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700988|gb|EEO89017.1| geranyltranstransferase [Yersinia pestis Pestoides A] gi|262362970|gb|ACY59691.1| geranyltranstransferase [Yersinia pestis D106004] gi|262366890|gb|ACY63447.1| geranyltranstransferase [Yersinia pestis D182038] gi|270338000|gb|EFA48777.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294355363|gb|ADE65704.1| geranyltranstransferase [Yersinia pestis Z176003] gi|320016363|gb|ADV99934.1| geranyltranstransferase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 306 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 16/240 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M N A AIE IH +L+HDD+ Sbjct: 41 EAMRYGAVIGGKRLRPYLVYATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDD 100 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--LSLVACTLAEGELRQ 147 LRRG+ + +G ++L GD L + AF ++ E + + LS++ Sbjct: 101 LRRGQPTCHVKFGEAHAILAGDALQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAG 160 Query: 148 LSLSKNLDVTEE-------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS---Y 197 + + LD+ E D + + KT L AA+ + + AG + R+ L S Y Sbjct: 161 MCAGQALDLEAETRPVLLGDLEQIHRHKTGALIRAAVRLGAQAAG--EAGRKTLLSLDRY 218 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ +GK G D + GK T P +L + + ++ + Sbjct: 219 AEAIGLAFQVQDDILDVIGDTATIGKRQGSDQQLGKSTYPALLGLDCAQTKAMDLYQEAL 278 >gi|145589885|ref|YP_001156482.1| polyprenyl synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048291|gb|ABP34918.1| farnesyl-diphosphate synthase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 304 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 26/260 (10%) Query: 20 LKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALM---LEYRGDNH-----VLL 67 L R+ + IP + ++Y GGKR+RP+L A + + + D Sbjct: 22 LDRLLDSEKTIPHRLHEAMRYAAQGGGKRIRPLLVYAAGQLGNSINEQADQEKNAALDAA 81 Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A AIE IH +L+HDD+ LRRG+ + T++LVGD L ++AF ++ K Sbjct: 82 AVAIECIHAYSLVHDDLPCMDDDDLRRGRPTVHKAFDEATALLVGDALQTRAFEILANAK 141 Query: 126 SQEALEALSLVACTLAEGELRQL---------SLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 + L++++ A R + S+ K LD+ +H +K T L S A Sbjct: 142 CDANIR-LAMISALAAASGSRGMAGGQAIDLESVGKKLDLDGLKQMHAMK--TGALLSCA 198 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + + AG+ + L Y LG+AFQ+VDDVLD + +GK G+D KPT Sbjct: 199 TALGGIAAGLSPAQMTQLLVYSEALGLAFQVVDDVLDATADSQTLGKTAGKDAAANKPTY 258 Query: 237 PVILAFQRGTKREKNFWKST 256 ++ K+ K ++ Sbjct: 259 VTLMGLDYAQKQAKTLQETA 278 >gi|257076714|ref|ZP_05571075.1| geranylgeranyl pyrophosphate synthase [Ferroplasma acidarmanus fer1] Length = 352 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 82/321 (25%), Positives = 150/321 (46%), Gaps = 30/321 (9%) Query: 24 CSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 C D + ++K F+ GGKRLRP+L + M + + + + +IE + L+H Sbjct: 34 CDDTRIKDIIIKLRDFTLNGGKRLRPILMIMGYNMFSGQDERIIKASISIELAQSFLLIH 93 Query: 82 DDVVDDSALRRGKVAARLVW-----GNQTSVLVGDFLLSQAFCMVIETKSQEAL------ 130 DD++D S +RRGK + GN + + + +S +I+T S EAL Sbjct: 94 DDIMDQSDMRRGKPSFHKAVEGSLDGNDATRIAENLAISAG--DLIDTFSHEALLRSGFE 151 Query: 131 -EAL-------SLVACTLAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVS 180 E L S + +G++ + S +EE LH +K+ + L + Sbjct: 152 LENLLDADFEFSRIIEDTGKGQILDIYSSIENLYSEERLTKLHFLKTARYTV-QGPLLMG 210 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + ++G + + Q +K +G GIAFQL DD+L G + GK + D GK TL +I Sbjct: 211 AYLSGNKKYI-QEIKDFGKYAGIAFQLYDDMLGIFGVEEKTGKPVKGDVNEGKKTLLIIK 269 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++ K ++ F +S + G +S + + +++ + T+ + Y A+ +L Sbjct: 270 AYENSGKEDREFIESCLKCGDVSDSDFNRLRELIKSTGSYDYTKQKIDEYNNIARSALEK 329 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 + K +++++DF L+ L Sbjct: 330 I---DGDKEVIKMLDFLLEYL 347 >gi|294340091|emb|CAZ88459.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Thiomonas sp. 3As] Length = 326 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 22/241 (9%) Query: 14 KVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LA 68 + LI + + + ++P + + Y GGKR+RP+L A ++ D+ L A Sbjct: 38 RAQQLIERFVPPEHPLVPQLHEAMHYAAAMGGKRVRPLLVWAAGECVQ--ADDQALDRAA 95 Query: 69 CAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETK 125 CA+E +H +L+HDD+ +DD LRRG+ + +G ++L GD L + A+ + E Sbjct: 96 CAVELVHAYSLVHDDLPCMDDDVLRRGQPTTHVRFGEALALLAGDALQALAYEVLTPEAD 155 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVLFSAALE 178 AL+A A G ++ + LD V+ +D +H+ KT L A++ Sbjct: 156 IAPALQARLCALLARASGA-DGMAGGQTLDILATGGAVSGDDLMHMHSRKTGALLKASVL 214 Query: 179 VSSLIAGVQNS----VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + G + AL++YG +G+AFQ+VDD+LD + + +GK G+D + K Sbjct: 215 MGAACGGFDTAHPAQTYTALETYGDAVGLAFQVVDDILDVTADSHTLGKTAGKDAQQNKS 274 Query: 235 T 235 T Sbjct: 275 T 275 >gi|221639691|ref|YP_002525953.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter sphaeroides KD131] gi|332558710|ref|ZP_08413032.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter sphaeroides WS8N] gi|221160472|gb|ACM01452.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter sphaeroides KD131] gi|332276422|gb|EGJ21737.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter sphaeroides WS8N] Length = 278 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 14/230 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--DDSA 89 Y + GG R+RP L L+ A GD+ L A A+E IH A+L+HDD+ DD+ Sbjct: 23 YAVTPGGARIRPTLLLSVATAC---GDDRPALSDAAAVALELIHCASLVHDDLPCFDDAE 79 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-ACTLAEGELRQL 148 +RRGK + ++L GD L+ F ++ + + AL LV A + G + Sbjct: 80 IRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTALAVRTGMPMGI 139 Query: 149 SLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + + + L ++KT LF AA ++ ++ AG + + + G +G AFQ+ Sbjct: 140 CAGQGWESESQINLSAYHRAKTGALFIAATQMGAIAAGYEA---EPWEELGARIGEAFQV 196 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 DD+ D + +GK G+D + +P + KR K+ I Sbjct: 197 ADDLRDALCDAATLGKPAGQDEIHARPNAVREYGVEGAAKRLKDILGGAI 246 >gi|13541093|ref|NP_110781.1| geranylgeranyl pyrophosphate synthase [Thermoplasma volcanium GSS1] gi|14324478|dbj|BAB59406.1| farnesyl pyrophosphate synthase [Thermoplasma volcanium GSS1] Length = 354 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 51/265 (19%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGKRLRP+ + + + +IE + L+HDDV+D S +RRGK + + Sbjct: 52 GGGKRLRPIFMILGYRLFSPEEKGIFDASISIELAQSYLLIHDDVIDKSDVRRGKPSMHI 111 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ------------ 147 L AF +S+ E L++VA LAE + Sbjct: 112 -------------RLEDAFVAGC-PQSRSTAEGLAIVAGDLAESYAHEALLRSGFYSENL 157 Query: 148 ----LSLSKNLDVTE------------EDY-------LHVIKSKTAVLFSAALEVSSLIA 184 L LSK +++T +D+ LH+ K+ L L + ++++ Sbjct: 158 VKADLELSKTIEMTGYGQFLDILSTTMDDFNEGDLIRLHLWKTAKYTL-EGPLAMGAILS 216 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G + + AL+ YG LGIAFQL DD+L G+ +GK++ D GK TL +I A + Sbjct: 217 GTEYDI-TALREYGRVLGIAFQLKDDILGLFGDEKTIGKSVYSDVNEGKKTLLMIKAMEW 275 Query: 245 GTKREKNFWKSTINDGKISVENLKK 269 G + + NF + + G ++ E ++ Sbjct: 276 GDRDDANFIRKMLRKGNVTNEEFER 300 >gi|15228704|ref|NP_189589.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75335025|sp|Q9LIA0|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11, chloroplastic; Short=GGPP synthase 11; Short=GGPS11; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11; AltName: Full=Dimethylallyltranstransferase 11; AltName: Full=Farnesyl diphosphate synthase 11; AltName: Full=Farnesyltranstransferase 11; AltName: Full=Geranyltranstransferase 11; Flags: Precursor gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana] Length = 357 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 78/232 (33%), Positives = 124/232 (53%), Gaps = 20/232 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + V+Y + +GGKR+RP+L +A ++ + ACA+E IHT++L+HDD+ +DD Sbjct: 90 IQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDD 149 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF--------CMVIETKSQEALEALSLVACT 139 + LRRGK +G +VL GD LL+ AF +V + A+ L+ T Sbjct: 150 ADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFVSNGLVAPERMIRAVMELAKAIGT 209 Query: 140 --LAEGELRQLSLSKNL---DVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L G++ L S+ L DV E +++H+ KTA L AA + +++ G + Sbjct: 210 KGLVAGQVTDLC-SQGLNPDDVGLERLEFIHL--HKTAALLEAAAVLGAIMGGGTEEEIE 266 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P ++ +R Sbjct: 267 KLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYPRLIGLER 318 >gi|294678977|ref|YP_003579592.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003] gi|293372070|gb|ADE44162.1| farnesyl diphosphate synthase [Rhodobacter capsulatus] gi|294477797|gb|ADE87185.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003] Length = 288 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D + Y GGKRLR L + +A + + A A+E +H +L+HDD+ +D+ Sbjct: 31 DAMAYAA-QGGKRLRAFLAIESAAIHGISMAQAMPAALAVEALHAYSLVHDDMPCMDNDD 89 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CM--VIETKSQEALEALSLVACTLAEGEL 145 LRRG W + T+VL GD L + AF C V+ + +L + AEG + Sbjct: 90 LRRGLPTVHKKWDDATAVLAGDALQTLAFELCTDPVLGSAENRVALVAALAQASGAEGMV 149 Query: 146 RQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +L + + +T ++ + + KT L S A + +++AG R L +Y Sbjct: 150 YGQALDIAAETAAVPLTLDEIIRLQAGKTGALISFAAQAGAILAGAD---RGPLTAYATA 206 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 LG+AFQ+ DD+LD G GK +G+D K T +L R + Sbjct: 207 LGLAFQIADDILDVEGNEEAAGKRLGKDAEAHKATFVSLLGLAGAKSRAAD 257 >gi|1842242|gb|AAC44848.1| geranylgeranyl synthase [Flavobacterium sp. ATCC 21588] Length = 295 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 S GKR R +L L A D V ACA+E +H A+L+ DD+ +DD+ RRG+ A Sbjct: 40 LSPGKRFRAVLMLMVAESSGGVCDAMVDAACAVEMVHAASLIFDDMPCMDDARTRRGQPA 99 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-TLAEGELRQLSLSKNLD 155 + G +VL G L+++A ++ E + + LVA + A G + L ++LD Sbjct: 100 THVAHGEGRAVLAGIALITEAMRILGEARGATPDQRARLVASMSRAMGPV-GLCAGQDLD 158 Query: 156 V-TEEDYLHVIKS---KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +D + + KT VLF A LE+ S+I G+ + + L ++G LG FQ DD+ Sbjct: 159 LHAPKDAAGIEREQDLKTGVLFVAGLEMLSIIKGLDKAETEQLMAFGRQLGRVFQSYDDL 218 Query: 212 LDYRGEVNEMGKNIGEDFRNGKP 234 LD G+ GK+ D P Sbjct: 219 LDVIGDKASTGKDTARDTAAPGP 241 >gi|126462671|ref|YP_001043785.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17029] gi|126104335|gb|ABN77013.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17029] Length = 292 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 14/230 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--DDSA 89 Y + GG R+RP L L+ A GD+ L A A+E IH A+L+HDD+ DD+ Sbjct: 37 YAVTPGGARIRPTLLLSVATAC---GDDRPALSDAAAVALELIHCASLVHDDLPCFDDAE 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-ACTLAEGELRQL 148 +RRGK + ++L GD L+ F ++ + + AL LV A + G + Sbjct: 94 IRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTALAVRTGMPMGI 153 Query: 149 SLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + + + L ++KT LF AA ++ ++ AG + + + G +G AFQ+ Sbjct: 154 CAGQGWESESQINLSAYHRAKTGALFIAATQMGAIAAGYEA---EPWEELGARIGEAFQV 210 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 DD+ D + +GK G+D + +P KR K+ I Sbjct: 211 ADDLRDALCDAETLGKPAGQDEIHARPNAVREYGVDGAAKRLKDILGGAI 260 >gi|126642791|ref|YP_001085775.1| geranyltranstransferase [Acinetobacter baumannii ATCC 17978] Length = 259 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 24/259 (9%) Query: 41 GGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAA 97 GGKR+RP L ATA + + A A+E IH +L HDD+ +D+ LRRG+ Sbjct: 3 GGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTC 62 Query: 98 RLVWGNQTSVLVGDFLLSQAF----CMVIETKSQ--------EALEALSLVACTLAEGEL 145 + +G T++L GD L S AF + + + Q + ++ L+ + + G++ Sbjct: 63 HVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQV 122 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQNSVRQALKSYGMNLGI 203 L ++ +++++ ++ ++KT L AA+ + ++ +G ++ + L+ YG +G+ Sbjct: 123 LDLQ-AEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK-LRQYGQAIGL 180 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQ+ DD+LD +GK G+D + K T P ++ ++ K Sbjct: 181 AFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELHDQAFEALAHF 240 Query: 264 VENLKK-----AFIIMREN 277 EN K+ F++ R N Sbjct: 241 GENAKELVEISQFLLARTN 259 >gi|315223294|ref|ZP_07865155.1| putative geranyltranstransferase [Streptococcus anginosus F0211] gi|315187726|gb|EFU21480.1| putative geranyltranstransferase [Streptococcus anginosus F0211] Length = 300 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 17/244 (6%) Query: 16 NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFI 74 F K + +D + + + Y + +GGKR+RP+L L L + H +A A+E I Sbjct: 16 TFYAQKAVSAD---LIEAILYSVNAGGKRIRPLLLLELLEGLGMELTEAHFQVAAALEMI 72 Query: 75 HTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 HT +L+HDD+ RRG++ + +G ++L GD L ++ ++ E ++ Sbjct: 73 HTGSLIHDDLPAMDDDDYRRGRLPSHKKFGEAMAILAGDSLFLDSYALIAEAALPSQIKV 132 Query: 133 -----LSLVACT--LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 LSL A T + G++ + K++ + E +H +KT L + + LIA Sbjct: 133 NLIAELSLAAGTFGMVGGQVLDMQGEGKDISLAELQTIHA--NKTGKLLTYPFIAAGLIA 190 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V S ++ LK+ G LG+AFQ+ DD+LD ++GK +D K T P IL Sbjct: 191 EVGESQQEKLKAIGQLLGLAFQVRDDILDITANFEDLGKTPQKDVAAEKATYPAILGL-N 249 Query: 245 GTKR 248 G KR Sbjct: 250 GAKR 253 >gi|254447158|ref|ZP_05060625.1| geranyltranstransferase [gamma proteobacterium HTCC5015] gi|198263297|gb|EDY87575.1| geranyltranstransferase [gamma proteobacterium HTCC5015] Length = 297 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 19/254 (7%) Query: 13 EKVNFLILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 E+VN I +R D + P+ + Y GGKR+RP+L ATA L + A Sbjct: 12 ERVNATI-ERYLPDPQQAPEALHSAMHYSATGGGKRVRPLLCYATAEALGQSAEQVDGAA 70 Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK- 125 A+E IH +L+HDD+ LRRG+ + + T++L GD L + AF ++ + Sbjct: 71 AALELIHAYSLVHDDLPAMDDDDLRRGQATCHIAFDEATAILAGDALQTLAFDILASDQA 130 Query: 126 -SQEALEALSLVACTLAEGELRQLSLSKNLDVTEE------DYLHVIKS-KTAVLFSAAL 177 + + L V + + + + +D+ E D L + + KT L A++ Sbjct: 131 LTDDPARRLRAVKVLASASGVDGMVGGQAIDIAAEGQQLTLDQLKRMHALKTGALIRASV 190 Query: 178 EVSSLIAG-VQNS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++S+ +AG +N Q L Y +G+AFQ+ DD+LD + +GK G D + KPT Sbjct: 191 QISAALAGEAENGDTYQRLSRYAECIGLAFQIRDDILDVISDTQTLGKTQGADEAHNKPT 250 Query: 236 LPVILAFQRGTKRE 249 +L + G K+ Sbjct: 251 YTSLLGLE-GAKQH 263 >gi|88607928|ref|YP_504938.1| geranyltranstransferase [Anaplasma phagocytophilum HZ] gi|88598991|gb|ABD44461.1| geranyltranstransferase [Anaplasma phagocytophilum HZ] Length = 280 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 97/197 (49%), Gaps = 24/197 (12%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D + Y I GK LR L + A + + L AIE +H+ +L+HDD+ +D++ Sbjct: 39 DAIGYCILPPGKCLRAFLASSVAQTFGVSIERTLPLCLAIEVLHSYSLVHDDLPSMDNAP 98 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-------------CMVIETKSQEALEALSLV 136 RRGK + + G ++L GD LL+ F C +I S +A +V Sbjct: 99 TRRGKNSCHIEHGEALALLTGDALLTLTFELLSSMDESCTVKCAIIRVIS-DACGHRGMV 157 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 A G+ + NL+ + E + K KTA LFSAA E +++A V + +QAL S Sbjct: 158 A-----GQALDMG---NLEPSLEAVKQIHKLKTARLFSAACESGAILAEVSTANQQALAS 209 Query: 197 YGMNLGIAFQLVDDVLD 213 YG LG AFQ DD+ D Sbjct: 210 YGETLGCAFQAKDDLCD 226 >gi|114707337|ref|ZP_01440234.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Fulvimarina pelagi HTCC2506] gi|114537218|gb|EAU40345.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Fulvimarina pelagi HTCC2506] Length = 296 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 114/216 (52%), Gaps = 9/216 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ GGKRLRP L + +A + + D + +ACA+E IH +L+HDD+ L Sbjct: 38 AMRHGTLGGGKRLRPFLLIESARIFGIQDDAVLDIACALEAIHCYSLVHDDLPAMDDDDL 97 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEAL-SLVACTLAEGE 144 RRG+ + + T++L GD LL+ AF +V I +++ + AL S A Sbjct: 98 RRGRPTVHKAYDDATAILAGDSLLTLAFGLVAGASKIPPEARVRIAALLSADAGAGGMAG 157 Query: 145 LRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + L L+ ED + +++ KT L + A E ++ A + ++ L+ +G +G+ Sbjct: 158 GQALDLAAEQSALSEDEIARMQAMKTGALIAFACEGGAIAAAASSEDQRRLRRFGEIIGL 217 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 AFQL DD+LD + ++GK G+D GK TLP + Sbjct: 218 AFQLADDLLDETADAAQLGKAAGKDRARGKKTLPAL 253 >gi|302554072|ref|ZP_07306414.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] gi|302471690|gb|EFL34783.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] Length = 389 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 5/181 (2%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD-FLLSQAFCMVIETKSQEAL 130 E +H TLLHDDV+D A RR + A V+G++ ++L GD + + Sbjct: 135 ELVHNFTLLHDDVMDRDATRRHRPTAWTVFGDEGAILAGDTLQALALRLLAQDPHPAAPA 194 Query: 131 EALSLVACT--LAEGELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A L C L G+ +L + DVT ++ L + ++KT L +A + L AG Sbjct: 195 AAALLADCVVELCAGQYADTALERRGPADVTLDEVLAMAEAKTGALLGSACAIGGLYAGA 254 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ AL ++G G+AFQL+DDV+ G+ GK +G D K +LPV+ AF GT Sbjct: 255 GDADVAALDAFGREAGLAFQLIDDVIGIWGDPRRTGKPVGADLAARKKSLPVVAAFASGT 314 Query: 247 K 247 Sbjct: 315 P 315 >gi|56416957|ref|YP_154031.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma marginale str. St. Maries] gi|222475323|ref|YP_002563740.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Florida] gi|56388189|gb|AAV86776.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma marginale str. St. Maries] gi|222419461|gb|ACM49484.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Florida] Length = 291 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 101/192 (52%), Gaps = 13/192 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y+I + GK +R L +A + + + L+ AIE +H +L+HDD+ +D+S Sbjct: 45 EALGYVISNPGKCIRSFLASTSAQVFGVSTERTLRLSAAIEVVHAYSLVHDDLPSMDNSP 104 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ------EALEALSLVA--CTLA 141 +RRGK + + +G +VL G+ LL+ F ++ T ++ E +E LS C + Sbjct: 105 IRRGKESCHIKFGEAVAVLTGNALLTLTF-ELLSTMNEGCAVRCEIIELLSKACGRCGMI 163 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G++ L + + + E + + KTA LFSAA E +++ G R AL YG L Sbjct: 164 AGQM--LDMEAHSSTSFEGVRRIHELKTARLFSAACEAGAVLGGASAEERAALAKYGAAL 221 Query: 202 GIAFQLVDDVLD 213 G AFQ DD+ D Sbjct: 222 GCAFQAKDDLSD 233 >gi|16082302|ref|NP_394768.1| geranylgeranyl pyrophosphate synthase related protein [Thermoplasma acidophilum DSM 1728] gi|10640656|emb|CAC12434.1| geranylgeranyl pyrophosphate synthase related protein [Thermoplasma acidophilum] Length = 354 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 41/285 (14%) Query: 40 SGGKRLRPMLTLATALMLEYR---GDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGK 94 GGKRLRP+ L+L YR +N+ + + +IE + L+HDDV+DDS LRRGK Sbjct: 52 GGGKRLRPIF-----LVLGYRLFADENNAIFDASISIELAQSYLLIHDDVIDDSDLRRGK 106 Query: 95 VAARL-VW-------------GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT- 139 + + +W G +++ GD + A +I + +L L+ + T Sbjct: 107 PSMHIRLWRSFFPESEKGKKMGEGLAIVAGDLAETYAHESLINSDFDPSLLLLADMELTK 166 Query: 140 ----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQAL 194 G+ + D E D + + KTA L + +L++G + + L Sbjct: 167 TIEMTGYGQFLDVVSGTLNDFRENDLIRLHLWKTARYTLEGPLAMGALLSGRHDQI-MDL 225 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + +G LGIAFQL DD+L G+ GK+I D GK TL +I A + +++ F Sbjct: 226 RLFGRTLGIAFQLKDDILGLFGDEATTGKSIYSDVNEGKRTLLMIKAMEFSDRQDAEFID 285 Query: 255 STINDGKISVENLKKAF-IIMRENRALVDTEYRAYSYGQKAKDSL 298 + G ++ E ++ I+M+ +Y Y K DSL Sbjct: 286 RILRRGNVTQEEFERIRNIVMKSG---------SYDYSVKLMDSL 321 >gi|148257671|ref|YP_001242256.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1] gi|146409844|gb|ABQ38350.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1] Length = 289 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 12/209 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--D 86 ++ +F G R+RP L A A GD+ AIE +H A+L+HDD+ D Sbjct: 30 AMQAAVFPKGARVRPRLCHAVAAAC---GDDEPAATDAAGSAIELLHCASLVHDDLPCFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 ++ LRRG+ + +G +VL GD L+ AF + +++ A + A G Sbjct: 87 NAKLRRGRPSVHAAFGEPLAVLAGDALIVLAFQTLAKSRCSPLRLAQLIATIGDAVGVPH 146 Query: 147 QLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 ++ + + E D H +SKT LF+AA + AG N +A +S G +G A+ Sbjct: 147 GIAAGQAWECEPEIDLSHYHRSKTGALFAAATVSGAAAAGHANP--EAWRSLGEKIGEAY 204 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 Q+ DD+ D + E GK +G+D G+P Sbjct: 205 QVADDIRDAASDEEEAGKPVGQDAALGRP 233 >gi|296272236|ref|YP_003654867.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299] gi|296096411|gb|ADG92361.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299] Length = 286 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 124/240 (51%), Gaps = 32/240 (13%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 T ++ K N + K E D + ++ +GGKR RPML L+ N +L+ Sbjct: 7 TFENYLKSNLPVSKTFHPHFE---DALSLMLDAGGKRFRPMLLLSVV-----NSKNSLLI 58 Query: 68 ------ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 A +E +HT +L+HDD+ +DD+ LRRG + T++LVGD L ++AF Sbjct: 59 KSALPVALGLEMLHTYSLVHDDLPAMDDATLRRGFETLHKKYDEVTAILVGDALNTEAFN 118 Query: 120 MVIET--KSQEALEALSLVACTLAEGELRQLSLSKNLD---------VTEEDYLHVIKSK 168 + S +E + +++ ++G + + + + +D +++ ++LH+ K Sbjct: 119 KIANAPLSSDVKIECIKVLS---SDGGIDGMIIGQAIDCFFENQKLELSQLEFLHI--HK 173 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 TA L + +L++ ++IA ++++ L ++G+++G+ FQ+ DD+LD E GK D Sbjct: 174 TAKLIAGSLKMGAIIANYDLAIQEKLYNFGIDIGLLFQIQDDILDETQSSLEAGKTTHND 233 >gi|289582888|ref|YP_003481354.1| polyprenyl synthetase [Natrialba magadii ATCC 43099] gi|289532441|gb|ADD06792.1| Polyprenyl synthetase [Natrialba magadii ATCC 43099] Length = 354 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 21/301 (6%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDN---HVLLACAIEFIHTATLLHDDVVDDSALRRG 93 L+ GGKR R +L L + +E G++ ++ AC E +H T++ DDV D +A RRG Sbjct: 56 LLDRGGKRWRAVLFL---VFIEGFGEDPTEYMPYACIPEILHNGTIIVDDVEDQAAKRRG 112 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 + A ++G ++ G+ L ++ E E L A + EL + L + Sbjct: 113 EPALHHIYGRDVALNAGNALYFLPLKLLRENPGDLPAEQ-QLAAYEMLMDELNRTHLGQG 171 Query: 154 LD----------VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 +D +T YL + KT L ++++I V +A+ +Y + Sbjct: 172 MDICWHNEREVRITPAQYLEMCACKTGCLGRIVARLAAIITDQPAHVEEAVATYAELTAV 231 Query: 204 AFQLVDDVLDYR---GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 AFQ+ DD+LD G E GK G D R GK TL VI A + + + + Sbjct: 232 AFQIGDDILDVENSLGRAGEFGKEFGNDVREGKKTLLVIHAIEESEPAKAARLQEILEAE 291 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQ 319 + E + +A I+ E ++ RA +A+ + L ++ + L +F + Sbjct: 292 TNTDEEVLEALSILEEAGSIEYARERALDLAAEARAEIAGLELNAETTEQLHTFTEFVVD 351 Query: 320 R 320 R Sbjct: 352 R 352 >gi|183601043|ref|ZP_02962536.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827] gi|188019381|gb|EDU57421.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827] Length = 305 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 21/263 (7%) Query: 13 EKVNFLILKRI----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 E+VN +L + SD+ + +K+ GGKRLRP LT ML N A Sbjct: 18 ERVNQYLLNALDALPFSDLPLAA-AMKHGALLGGKRLRPFLTYTVGSMLGVDSVNLDAPA 76 Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----- 121 A+E IH +L+HDD+ LRRG+ + +G ++L GD L + AF ++ Sbjct: 77 AAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAILAGDALQTLAFQLLSSAEM 136 Query: 122 IETKSQEALEALSLVA-----CTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSA 175 + ++ + LS +A + G+ L K +D+ + +H + KT L A Sbjct: 137 PDVTDKDRIAMLSELAYASGLAGMCGGQALDLEAEGKRVDLAALERIH--QHKTGALIRA 194 Query: 176 ALEVSSLIAGVQ-NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A+ + + AG++ + AL Y ++G+AFQ+ DD+LD G+ GK G D + K Sbjct: 195 AIRMGAYAAGIKGHKALPALDKYAESIGLAFQVQDDILDVIGDSEVTGKRQGADAEHEKS 254 Query: 235 TLPVILAFQRGTKREKNFWKSTI 257 T P +L + ++ + + + + Sbjct: 255 TYPSLLGLEAAQEKARELYYNAL 277 >gi|67476710|ref|XP_653910.1| geranylgeranyl pyrophosphate synthase [Entamoeba histolytica HM-1:IMSS] gi|56470952|gb|EAL48563.1| geranylgeranyl pyrophosphate synthase, putative [Entamoeba histolytica HM-1:IMSS] Length = 349 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 82/311 (26%), Positives = 145/311 (46%), Gaps = 55/311 (17%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG--------DNHVLLACAIEFIHTATLLHDD 83 D+++ + GKRLRP+ +L+L + G N + ACA+E +H +TL HDD Sbjct: 34 DIMEKFVMGPGKRLRPL-----SLLLFFIGGGGKIEEQKNIIRTACAMELLHDSTLAHDD 88 Query: 84 VVDDSALRRGK--------------------------VAARLVWGNQTSVLVGDFLLSQA 117 ++D+ +RR ++ + + +++ G+ L S A Sbjct: 89 IMDEDEMRRNAPTIVKTFYDKYIERNKEDVKTEKFLFMSRGTTYASSLAIMTGNILYSMA 148 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + +E+ + A L L + L G++ +S L+ EE L++I KTA+ F Sbjct: 149 QRLCLESGTNIAEMVLELFSV-LNYGQILDMS---GLNTVEEYNLNII-MKTAIFFKTTA 203 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +AG + K +G + GIAFQ+ DD+LD +N + +G D + GK T Sbjct: 204 SIGLTLAGRSEHDIELGKEWGEHFGIAFQMRDDLLDI-DPLNGKLRKMGSDIKEGKKTAV 262 Query: 238 VILAFQRG--TKREKNFWKSTINDGKISVENLKKAF-----IIMRENRALVDTEYRAYSY 290 V A + G +K EK F + + + + +N ++AF I+ + +V E + + Sbjct: 263 VWTALKEGVLSKEEKEFVEGILKLNEKAFDN-QEAFTKFLNILRGKPSEVVRQEIKEHH- 320 Query: 291 GQKAKDSLRCL 301 QKA D+L+ L Sbjct: 321 -QKALDALKQL 330 >gi|116052080|ref|YP_789076.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14] gi|254242726|ref|ZP_04936048.1| geranyltranstransferase [Pseudomonas aeruginosa 2192] gi|313109486|ref|ZP_07795442.1| geranyltranstransferase [Pseudomonas aeruginosa 39016] gi|115587301|gb|ABJ13316.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14] gi|126196104|gb|EAZ60167.1| geranyltranstransferase [Pseudomonas aeruginosa 2192] gi|310881944|gb|EFQ40538.1| geranyltranstransferase [Pseudomonas aeruginosa 39016] Length = 295 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 137/271 (50%), Gaps = 21/271 (7%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 +++ + + ++Y + +GGKR+RP+L A L ACA+E IH +L+HDD+ Sbjct: 27 ELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLP 86 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQE---ALEALSLVA- 137 LRRG+ + T++L D L + AF ++ +T+ QE LE L+ +A Sbjct: 87 AMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLAR 146 Query: 138 ----CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVR 191 + G+ L S+ LD + +H + KT L A++ + +L +G + + Sbjct: 147 AAGSAGMVGGQAIDLGSVGVALDQAALEVMH--RHKTGALIEASVRLGALASGRAEPAAL 204 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--RGTKRE 249 AL+ Y +G+AFQ+ DD+LD + +GK G+D + KPT P +L + +G E Sbjct: 205 AALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALE 264 Query: 250 -KNFWKSTINDGKISVENLKK--AFIIMREN 277 ++ + ++ S + L++ +I+ R N Sbjct: 265 LRDLALAALDGFPPSADPLRQLARYIVERRN 295 >gi|146284017|ref|YP_001174170.1| geranyltranstransferase [Pseudomonas stutzeri A1501] gi|145572222|gb|ABP81328.1| geranyltranstransferase [Pseudomonas stutzeri A1501] Length = 295 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 16/230 (6%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 +E + ++Y + +GGKR+RP+L A L + ACA+E IH +L+HDD+ Sbjct: 28 LERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPA 87 Query: 87 DSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVA----- 137 LRRG+ + ++L GD L S AF + + + Q+A L + A Sbjct: 88 MDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAVLARA 147 Query: 138 ---CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G+ L S+ LD + +H + KT L A++++ +L +G ++ A Sbjct: 148 AGPAGMVGGQAIDLGSVGLKLDRDALELMH--RHKTGALIEASVQLGALASGRADADNLA 205 Query: 194 -LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 L Y +G+AFQ+ DD+LD + +GK+ G D KPT P +L Sbjct: 206 SLSQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGM 255 >gi|114797210|ref|YP_760540.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444] gi|114737384|gb|ABI75509.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444] Length = 295 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 12/227 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + GKR+RP L T M + + A A+E IH +L+HDD+ Sbjct: 36 AMRHAALANGKRMRPFFVLETGAMFGASEKSLLRTAAALECIHCYSLVHDDLPCMDDDDF 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVACTLAEGELRQL 148 RRG+ + T+VL GD LL+ AF ++ ET A+ L + A G R + Sbjct: 96 RRGQPTVHKAFDEATAVLAGDALLTLAFKILASSETHDDPAVRVLLIERLADAAGA-RGM 154 Query: 149 SLSKNLDVTEEDY---LHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + +D+ EE+ L+ I + KT L S ALE +I + + R AL + +L Sbjct: 155 VGGQMIDMLEEESPRDLNTITRMQRLKTGALISYALEAGGIIGHAREAERNALAGFANDL 214 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 G+A+Q+ DD+LD G+ + +GK + +D GK +L +R Sbjct: 215 GLAYQIADDILDAEGDESIVGKAVSKDKDAGKANFVTLLGVDGARQR 261 >gi|15672839|ref|NP_267013.1| farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis Il1403] gi|12723785|gb|AAK04955.1|AE006320_4 farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis Il1403] gi|326406404|gb|ADZ63475.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus lactis subsp. lactis CV56] Length = 285 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 108/234 (46%), Gaps = 23/234 (9%) Query: 30 IPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 + + KY + +GGKR+RP+L L A LE H +A A+E IHT +L+HDD+ + Sbjct: 25 LAESAKYSLLAGGKRIRPLLFLNLLEAFDLELS-KAHYHVAAALEMIHTGSLIHDDLPAM 83 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT----LA 141 D+ RRG++ + T++L GD L F ++ S L A +VA T A Sbjct: 84 DNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFIL----STADLSAEIIVALTRELAFA 139 Query: 142 EGE--------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 G L K L + E + +H + KT L + + ++A + Sbjct: 140 SGSYGMVAGQILDMAGEGKELTLAEIEQIH--RLKTGRLLTFPFVAAGIVAQKSTDEVEK 197 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 L+ G LG+AFQ+ DD+LD E+GK G+D K T L + K Sbjct: 198 LRQVGQILGLAFQIRDDILDVTATFAELGKTPGKDILEEKSTYVAHLGLEGAKK 251 >gi|188581709|ref|YP_001925154.1| polyprenyl synthetase [Methylobacterium populi BJ001] gi|179345207|gb|ACB80619.1| Polyprenyl synthetase [Methylobacterium populi BJ001] Length = 320 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 105/219 (47%), Gaps = 14/219 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + +++ + GGKRLRP L + TA ML D + +E +H +L+HDD+ Sbjct: 56 EAMRHAVLGGGKRLRPFLAIETARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDD 115 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE-----ALEALSLVACT----L 140 LRRGK + T++LVGD L + AF + + + Q A L L + + Sbjct: 116 LRRGKPTVHKAYDEATAILVGDALQTLAFEVTADPRWQPDPMIRAELVLGLARASGLGGM 175 Query: 141 AEGELRQLSLSKNL---DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G+L LS D+ +D L + KT + + ++E +L+ G R AL Y Sbjct: 176 VGGQLLDLSAEGRFGPADMDIDDTLRMQAMKTGAILAFSVEAGALVGGAGAEERAALLRY 235 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G LG AFQ+ DD+LD MGK G+D GK TL Sbjct: 236 GKALGQAFQVADDILDREASPEAMGKATGKDKDAGKATL 274 >gi|254995136|ref|ZP_05277326.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Mississippi] gi|255003306|ref|ZP_05278270.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Puerto Rico] gi|255004432|ref|ZP_05279233.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Virginia] Length = 286 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 13/194 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + + + Y+I + GK +R L +A + + + L+ AIE +H +L+HDD+ +D+ Sbjct: 38 LHEALGYVISNPGKCIRSFLASTSAQVFGVSTERTLRLSAAIEVVHAYSLVHDDLPSMDN 97 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ------EALEALSLVA--CT 139 S +RRGK + + +G +VL G+ LL+ F ++ T ++ E +E LS C Sbjct: 98 SPIRRGKESCHIKFGEAVAVLTGNALLTLTF-ELLSTMNEGCAVRCEIIELLSKACGRCG 156 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + G++ L + + + E + + KTA LFSAA E +++ G R AL YG Sbjct: 157 MIAGQM--LDMEAHSSTSFEGVRRIHELKTARLFSAACEAGAVLGGASAEERAALAKYGA 214 Query: 200 NLGIAFQLVDDVLD 213 LG AFQ DD+ D Sbjct: 215 ALGCAFQAKDDLSD 228 >gi|118475576|ref|YP_891278.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40] gi|118414802|gb|ABK83222.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40] Length = 277 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 126/231 (54%), Gaps = 24/231 (10%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIH 75 L L ++ S D + +++ +GGK R L L AL + + ++ + A A+E +H Sbjct: 9 LNLPKVDSFHPHFNDSLSWVLKAGGKHFRAKLLLGVVDALKPDLKSASYPV-AAAVEMLH 67 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 T +L+HDD+ +D++ LRRG + + ++VL GD L + AF M+ S L A Sbjct: 68 TYSLIHDDLPCMDNADLRRGVATLHVKYDEVSAVLAGDALNTHAFYML----SSANLPAE 123 Query: 134 SLVAC--TLAE-GELRQLSL---------SKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++V C TLAE G + + + +K+L++ E +LH+ KT L +A++++ + Sbjct: 124 AVVKCVQTLAENGGIYGMVIGQAIDCYFENKHLNLDELKFLHL--HKTGALIAASMKMGA 181 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED-FRN 231 +I+ + + + + G+ LG+AFQ+ DD++D + + GK + D F+N Sbjct: 182 IISAQSDKQCEKIYNIGLKLGLAFQIHDDIIDATSDEMKAGKTVNNDLFKN 232 >gi|115375696|ref|ZP_01462950.1| IdsA [Stigmatella aurantiaca DW4/3-1] gi|310825166|ref|YP_003957524.1| polyprenyl synthetase [Stigmatella aurantiaca DW4/3-1] gi|115367259|gb|EAU66240.1| IdsA [Stigmatella aurantiaca DW4/3-1] gi|309398238|gb|ADO75697.1| Polyprenyl synthetase [Stigmatella aurantiaca DW4/3-1] Length = 391 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 12/219 (5%) Query: 43 KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102 K LRP L +A + + A A+E H A L+HDD+ D+S LRRG+ + G Sbjct: 52 KGLRPALCIAACRASGGTLEAALRPAVALELYHNAFLIHDDIEDESHLRRGRPTLHQLHG 111 Query: 103 NQTSVLVGDFLLSQAFCMVIET-------KSQEALEALSLVACTLAEGELRQLSLSK--N 153 ++ VGD +L+ + +++ S L+ ++ +A AEG+ +L + + Sbjct: 112 VPVAINVGDAMLALSLQPLLDNIGFIGLGPSLRILQEVARMARESAEGQALELDWIRRGH 171 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVS-SLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDV 211 + + DY+ +++ KT +S V+ +A QN A L + LGIAFQ+ DD+ Sbjct: 172 WALEDADYVRMVEQKT-CWYSFITPVTLGALAARQNPAHTAQLAEFARCLGIAFQIQDDL 230 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L+ GEV GK IG D GK TL ++ +R + E+ Sbjct: 231 LNLSGEVGAYGKEIGGDLWEGKRTLMLLHMMRRASPPER 269 >gi|254488785|ref|ZP_05101990.1| geranyltranstransferase [Roseobacter sp. GAI101] gi|214045654|gb|EEB86292.1| geranyltranstransferase [Roseobacter sp. GAI101] Length = 301 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 75/264 (28%), Positives = 129/264 (48%), Gaps = 21/264 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGK LR L + +A + A AIE +H +L+HDD+ +D+ Sbjct: 43 IAEAMRYAV-TGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDN 101 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRG+ + W T+VL GD L + AF + +T +A ++LVA +R Sbjct: 102 DDLRRGQPTVHVKWDEVTAVLAGDALQALAFELAAQTGCSDAGR-VALVAGLAHASGVRG 160 Query: 148 LSLSKNLDVTEE--------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + LD+ E D + +++ KT L A ++A ++ R L+ Y Sbjct: 161 MVGGQALDIAAESASVPLTLDQITTLQAGKTGALIEWAATAGPVMA--RDDPRP-LQRYA 217 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +LG+AFQ+ DD+LD G+ +GK +G+D GK T +L +R + ++ Sbjct: 218 RDLGLAFQIADDILDIEGDAETVGKAVGKDAGAGKATFVSLLGLAPAKQRAQALIETACE 277 Query: 259 DGKI---SVENLKKA--FIIMREN 277 + E L+ A F+I R++ Sbjct: 278 ALAVYGDDAETLRDAARFVIARKS 301 >gi|237749809|ref|ZP_04580289.1| octaprenyl-diphosphate synthase [Helicobacter bilis ATCC 43879] gi|229374559|gb|EEO24950.1| octaprenyl-diphosphate synthase [Helicobacter bilis ATCC 43879] Length = 421 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 12/163 (7%) Query: 27 VEMIPDVVK------YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 EMI D+ Y GK LR L L+ D L IE I +A+LL Sbjct: 11 TEMIADINSDEALTLYKHLESGKMLRSKLVLSVV-----DSDEAYRLCAVIELIQSASLL 65 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 HDDV+D S LRRGK + +GN+ ++++GD L S+AF + A ++LS L Sbjct: 66 HDDVIDSSDLRRGKPSLNAQFGNKNAIMLGDILYSRAFFELSHFPKSIA-QSLSKSVVEL 124 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + GEL ++L ++ + EE YL +I K+A L +A+ E ++L+ Sbjct: 125 SVGELEDVNLEQSFNEYEEKYLSMIGHKSASLIAASAECAALL 167 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 6/152 (3%) Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE L +S+ D T+ + IK++ + F + S + + YG NLG Sbjct: 252 GEGSYLKVSERADTTKS--VKSIKTRQSCSFFSKETTQS--PDSSKDIHKLYYDYGFNLG 307 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQ++DD+LD + ++GK DF++GK TLP I + +EK W ++ + Sbjct: 308 MAFQIIDDILDITQDSTKLGKPALSDFKSGKTTLPYIYLYH-ALPKEKQVWLKSLFKQDL 366 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 + ++ +K ++ ++ L +A YG KA Sbjct: 367 NAKDAQKLKDLLLDS-PLQKAREKALEYGNKA 397 >gi|160938274|ref|ZP_02085629.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC BAA-613] gi|158438647|gb|EDP16404.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC BAA-613] Length = 305 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 110/238 (46%), Gaps = 25/238 (10%) Query: 30 IPDVVKYLIFSGGKRLRPMLT-----LATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 I + + Y + +GGKRLRPML L T +LE + A+E IHT++L+HDD+ Sbjct: 38 IFEAMNYSMKAGGKRLRPMLMQEMCRLFTGTLLEAV----IPFMAAVEMIHTSSLVHDDL 93 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIETK-SQEALEALSLVAC 138 +DD +RRGK + +G VL GD L+ AF ET + L + Sbjct: 94 PCMDDDMMRRGKASTWAEYGEDIGVLTGDALMMYAFETAANAFETSIDPDELSRIGRAMG 153 Query: 139 TLAE---------GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 LA G+ + L+ + + + + KT L A++ + +++ G Sbjct: 154 ILARKTGVYGMIGGQTVDVELAGG-PIPGDKLEFIYRLKTGALIEASMLIGAVLGGAAEE 212 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + ++S +G+AFQ+ DD+LD G + GK G D +N K T + + K Sbjct: 213 DCKIVESLAAKIGMAFQIQDDILDVTGSQDVTGKPSGSDEKNKKTTYVTLEGLDKAKK 270 >gi|299756412|ref|XP_001829313.2| trans-hexaprenyltranstransferase [Coprinopsis cinerea okayama7#130] gi|298411665|gb|EAU92273.2| trans-hexaprenyltranstransferase [Coprinopsis cinerea okayama7#130] Length = 479 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 74/267 (27%), Positives = 125/267 (46%), Gaps = 28/267 (10%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IH A LLH ++ D S + ++ +GN+ S+L GDFLL +A ++ Sbjct: 226 LAQIVEMIHVALLLHQNISDAS--KSPSSDSQNPFGNKLSILGGDFLLGRASTVLSHLGG 283 Query: 127 QEALEALSLVACTLAEGELRQLS--LSKNLDVTEED---------YLHVIKSKTAVLFSA 175 E +E ++ V L EGE + + L V E YL K+A L + Sbjct: 284 GEVVELIASVISNLVEGEFLGMDKVQTPGLGVMEGPRTREEAWDLYLRKTYLKSASLMAK 343 Query: 176 ALEVSSLIAGV-QNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 S ++ G +N V ++ +YG +LGIA+QL++D LDY + G Sbjct: 344 GARASVVLGGCGENEVWKEVAYAYGRSLGIAYQLIEDTLDY--------DACSPGLQPGL 395 Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293 T PV+ A + E K I +++ A ++++ + T A++Y +K Sbjct: 396 ATAPVLYALE-----EHPELKHLIARNLTGTGDIEAAIQCVQQSSGVERTRLLAHAYAEK 450 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A+++L+ LPDS K +L + + + R Sbjct: 451 ARETLQRLPDSDTKLALEGLTETVITR 477 >gi|330469324|ref|YP_004407067.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] gi|328812295|gb|AEB46467.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] Length = 342 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 87/318 (27%), Positives = 133/318 (41%), Gaps = 66/318 (20%) Query: 16 NFLILKRICS---DVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRG------DNH 64 +FL +R+ D ++P + ++ + GGKRLRP YRG D Sbjct: 7 DFLAGRRLWMTDLDDALVPVAEAIEAFVLGGGKRLRPAFA-----YWGYRGAGGVDTDAV 61 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV---------WG-------NQTSVL 108 V A+EF+ + L+HDD++D S RRG+ A WG + ++L Sbjct: 62 VTALAALEFVQASALIHDDLMDRSDTRRGEPAVHRRFAARHRAAGWGGNPDGFGDAAAIL 121 Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168 +GD C+V S E L + L T+A R +VT YL V+ Sbjct: 122 LGDL------CLVW---SDELLHSAGLDPRTVARA--RPDFDEMRTEVTVGQYLDVVTQA 170 Query: 169 TAVLFSAALEVSSLIAGVQNS--------------------VRQALKSYGMNLGIAFQLV 208 T A+LE +S IA +++ +R A +YG+ LG AFQL Sbjct: 171 TG---DASLERASKIARYKSAKYTVERPLLLGAALADAPADIRVAYSAYGLPLGEAFQLR 227 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DDVL G+ + GK G+D R GK T V A + + + + + D + + Sbjct: 228 DDVLGVFGDPAQTGKPAGDDLREGKRTYLVAAALEVADEAGREVVLAGLGDPTLDAAGVA 287 Query: 269 KAFIIMRENRALVDTEYR 286 + ++ AL TE R Sbjct: 288 RLRDVITSTGALARTEQR 305 >gi|170782926|ref|YP_001711260.1| geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis subsp. sepedonicus] gi|169157496|emb|CAQ02687.1| geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis subsp. sepedonicus] Length = 340 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 107/225 (47%), Gaps = 31/225 (13%) Query: 40 SGGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 +GGKR RP + +A L + + HV A E +HTA ++HDDV+D RRG Sbjct: 35 AGGKRFRPRMVMAAYDGLGGQDVQAAAHV--GAAFEMLHTALIVHDDVIDRDFTRRGGPN 92 Query: 97 ARLVW-----------------GNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALS 134 + G +V+ GD L A+ ++ + ++ +E L Sbjct: 93 VSGAYRDIATTQGLPQPLAEHRGMSAAVIAGDLALVNAYRLIDASGVRDLTRSHLMEILD 152 Query: 135 LVACTLAEGELRQLSLSKNLDVTEED-YLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQ 192 A GEL + S DV D L + + KTAV F A L+ +++AG + V Sbjct: 153 DAVFASAAGELIDVEFSLTADVPSVDEILRMERLKTAVYSFEAPLQAGAVLAGARPEVVA 212 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK-NIGEDFRNGKPTL 236 AL + ++GIA+Q+VDDVL G+ E GK N+G D R GK T+ Sbjct: 213 ALGDFDRDIGIAYQVVDDVLGVFGDEQETGKTNLG-DLREGKRTV 256 >gi|325680723|ref|ZP_08160261.1| polyprenyl synthetase [Ruminococcus albus 8] gi|324107503|gb|EGC01781.1| polyprenyl synthetase [Ruminococcus albus 8] Length = 297 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 16/227 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSAL 90 + ++Y + +GGKRLRPML L M D + LAC++E IHT +L+HDD+ Sbjct: 36 EAMEYSLTAGGKRLRPMLMLEFYRMCGGEDLDKMLKLACSVELIHTYSLIHDDLPCMDDD 95 Query: 91 --RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA------LSLVACTLAE 142 RRGK + + ++L GD L + AF ++ E + + A +S+++ + Sbjct: 96 DYRRGKPSCHKAFPENIALLAGDALNTLAFEVISECAMEGTISADKAVMLISVLSKAIGT 155 Query: 143 -----GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G++ L ++N +++ E + KT L AA V +IA + + A Y Sbjct: 156 DGMIGGQVIDLQ-TENEEISIETLNTLQSCKTGALIEAAC-VMGVIAAGRLDLIPAAADY 213 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G AFQ+VDD+LD G E+GK IG D K T +L +R Sbjct: 214 AQAMGRAFQIVDDILDVTGTFEELGKPIGSDSEQHKNTYVSLLGLER 260 >gi|223038350|ref|ZP_03608644.1| geranyltranstransferase [Campylobacter rectus RM3267] gi|222880207|gb|EEF15294.1| geranyltranstransferase [Campylobacter rectus RM3267] Length = 659 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 21/212 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDS 88 + + Y + SGGK R ML A + R + +A A E +H+ +L+HDD+ +DDS Sbjct: 404 EALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAAFHVALAFETMHSYSLIHDDLPAMDDS 463 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT--------- 139 LRRG+ + + + T++L GD L + AF + ++ L+A + + C Sbjct: 464 DLRRGQPSLHVKFDEVTAILAGDALNTHAFYQI----ARAPLDADARIKCVEILSRNAGI 519 Query: 140 --LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 +A G+ ++ L + E +LH+ KTA L +A+L+ ++AG+ + + Sbjct: 520 YGMALGQAVDCYFENQKLGLEELKFLHI--HKTARLIAASLQAGCVVAGLDETEAARIYD 577 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 G++LG+AFQ+ DD++D GK D Sbjct: 578 IGLDLGLAFQIADDIIDATQSAETAGKPTHND 609 >gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays] gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays] Length = 363 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 128/233 (54%), Gaps = 19/233 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 E++ + ++Y + +GGKRLRP+L +A ++ V +ACA+E IHTA+L+HDD+ + Sbjct: 93 EVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCM 152 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---------LSLV 136 DD ALRRG+ + + +G T++L GD LL+ AF V + + A L V Sbjct: 153 DDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSV 212 Query: 137 ACT--LAEGELRQL----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A +A G++ + + S ++ + +Y+HV KTA L AA +++ G + Sbjct: 213 AGVGGIAAGQVADMASEGAPSGSVSLGALEYIHV--HKTARLVEAAAVSGAVVGGGGDGE 270 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + ++ Y LG+ Q+VDDVLD G ++GK G+D GK T P ++ + Sbjct: 271 VERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLK 323 >gi|242240309|ref|YP_002988490.1| geranyltranstransferase [Dickeya dadantii Ech703] gi|242132366|gb|ACS86668.1| Polyprenyl synthetase [Dickeya dadantii Ech703] Length = 303 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 21/263 (7%) Query: 13 EKVNFLILKRICSDV--EMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +++N L+R S + + IP + + Y GGKRLRP L +T + ++ + A Sbjct: 13 QRIN-TTLRRFISALPFQQIPLIEAMAYGSLLGGKRLRPFLVYSTGRLFNLPLESLDVPA 71 Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 A+E IH +L+HDD+ LRRG+ + +G ++L GD L + AF ++ T+ Sbjct: 72 AAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAGTEM 131 Query: 127 QEA--LEALSLVACTLAEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSA 175 + LS++A + + + + LD+ E + +H + KT L A Sbjct: 132 PRVSDRDRLSMIAELASASGVGGMCGGQALDLEAEGRQVDLAALEQIH--RHKTGALIRA 189 Query: 176 ALEVSSLIAG-VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 ++ + +L AG V +L Y +G+AFQ+ DD+LD G+ GK G D + GK Sbjct: 190 SVRLGALAAGEAGRQVMPSLDRYANAIGLAFQVQDDILDVIGDSATTGKRQGADQQLGKS 249 Query: 235 TLPVILAFQRGTKREKNFWKSTI 257 T P +L + + ++ ++ Sbjct: 250 TYPALLGLAQAKAKALELYQESL 272 >gi|16126308|ref|NP_420872.1| geranyltranstransferase [Caulobacter crescentus CB15] gi|221235087|ref|YP_002517523.1| dimethylallyltransferase/geranyltranstransferase [Caulobacter crescentus NA1000] gi|13423548|gb|AAK24040.1| geranyltranstransferase [Caulobacter crescentus CB15] gi|220964259|gb|ACL95615.1| dimethylallyltransferase/Geranyltranstransferase [Caulobacter crescentus NA1000] Length = 294 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 14/273 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L R + + ++Y GKRLRP L T M + + ACA+E IH + Sbjct: 22 LLPRADGPESRLTEAMRYAALGPGKRLRPFFALETGKMFDLPERPVLRAACALECIHAYS 81 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +RRG+ + T++L GD L + AF ++ + + S + Sbjct: 82 LVHDDLPAMDDDDVRRGRPTVHKQYDEATAILAGDALQTAAFEIMAHPDTHDDGHVRSEL 141 Query: 137 ACTLA-EGELRQLSLSKNLDV--TEEDYLHVIKS---KTAVLFSAALEVSSLIAGVQNSV 190 LA R + + +D+ +D V + KT L + A E+ +IA + S Sbjct: 142 VRKLAIASGARGMCGGQMIDLLGVRDDLGAVARMQRLKTGALIAFAFEIPLIIARAKESE 201 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI-GEDFRNGKPTLPVILAFQRGTKRE 249 R AL ++ +LG+A+Q+VDD+LD G+ +GK G+D GK +L +R Sbjct: 202 RSALMAFAQDLGLAYQIVDDILDAEGDEETLGKAAGGKDAAKGKANYVTLLGLDAAKERV 261 Query: 250 KNFWKSTINDGKI---SVENLKKA--FIIMREN 277 + T + +I E+L+ + F++ R N Sbjct: 262 TLLAEQTRSHLEIFGERAEHLRASVDFVLDRRN 294 >gi|113971065|ref|YP_734858.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4] gi|113885749|gb|ABI39801.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4] Length = 293 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 10/213 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGKR+RP L + M + A AIE IH +L+HDD+ LRRG+ Sbjct: 42 GGKRIRPFLVYSVGQMFGVPLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVH 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLAEGELRQLSLSKNLDVT 157 + + T++L GD L + AF +V E + + E +++V R + + +D+ Sbjct: 102 IAFDEATAILAGDALQTLAFEIVTEAVTGISSEQHIAMVRALAKASGYRGMCGGQAIDLA 161 Query: 158 EEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 D L +K+ KT L S A+E++ + A Q + + +G+AFQ+ DD Sbjct: 162 STDKLIDLKALTQLHNMKTGALISCAVELALIAANAPKDEYQTMIEFAHAVGLAFQVQDD 221 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +LD E+GK G D + K T P +L Q Sbjct: 222 ILDIIATTEELGKPQGSDAESNKSTFPQLLGLQ 254 >gi|260654971|ref|ZP_05860459.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1] gi|260630286|gb|EEX48480.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1] Length = 280 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 13/229 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP+L A + + ++ +A A+E +HTA+L+HDD+ +D+ +LRRG Sbjct: 22 YSLEAGGKRIRPVLCQEGARLAGVKAEDTFPMALALEMVHTASLIHDDLPCMDNDSLRRG 81 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIET------KSQEALEALSLVACTLA-EGELR 146 K V+G ++L GD LL F +E +++ + A+ L A L +G Sbjct: 82 KPTNHSVFGESLALLAGDALLCFGFQTALEGLKARKIETKRVVRAMELFASALGPQGMCG 141 Query: 147 QLSLSKNLDVTEEDYLHVIKS----KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 +L +L L ++S KT L ++ + +++ + L YG LG Sbjct: 142 GQTLDTDLQSRASCDLPFVQSMASGKTMALIRCSVLCGLCLGERGDALTERLDEYGRRLG 201 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +AFQ+ DD+LD E GK G+D K T +L R K Sbjct: 202 LAFQIADDLLDATATTEEAGKTTGKDEEQDKATFVCVLGVDGAKARLKE 250 >gi|271499581|ref|YP_003332606.1| polyprenyl synthetase [Dickeya dadantii Ech586] gi|270343136|gb|ACZ75901.1| Polyprenyl synthetase [Dickeya dadantii Ech586] Length = 303 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 12/230 (5%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGKRLRP L T + D+ A A+E IH +L+HDD+ LRRG+ Sbjct: 44 GGKRLRPFLVYTTGQLFAVSPDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCH 103 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQLSLSKNLDV 156 + +G ++L GD L + AF ++ + + L++++ + + + + LD+ Sbjct: 104 VRFGEDKAILAGDALQTLAFSILADAPMPHVSDRDRLAMISELASASGVAGMCGGQALDL 163 Query: 157 TEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLV 208 E + + + KT L A++ + +L AG + + L Y +G+AFQ+ Sbjct: 164 AAEGHQVDLQTLERIHRHKTGALIRASVRLGALAAGERGRLALPYLDRYANAVGLAFQVQ 223 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 DD+LD G+ GK G D + GK T P +L ++ ++ + K +++ Sbjct: 224 DDILDVIGDSATTGKRQGADQQLGKSTYPALLGLEQAKQKARELCKESLS 273 >gi|50120071|ref|YP_049238.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043] gi|49610597|emb|CAG74042.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043] Length = 303 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 115/244 (47%), Gaps = 24/244 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L T + + ++ A A+E IH +L+HDD+ Sbjct: 35 NAMEYGSLLGGKRLRPFLVYTTGELFDMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVA------- 137 LRRG+ + +G T++L GD L + AF ++ + ++ L +S +A Sbjct: 95 LRRGQPTCHIKFGEATAILAGDALQTLAFSILADAPMTQVSDRDRLAMISELAQASGVAG 154 Query: 138 -CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK- 195 C +L NL E + H KT L AA+ + +L AG ++ R AL Sbjct: 155 MCGGQAFDLEAEGHQVNLAALERIHRH----KTGALIRAAVRLGALAAG--DAGRDALPY 208 Query: 196 --SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 Y +G+AFQ+ DD+LD G+ GK G D + GK T P +L K+ + + Sbjct: 209 LDRYANAIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLLGLDNARKKAQELY 268 Query: 254 KSTI 257 + ++ Sbjct: 269 QESL 272 >gi|114048295|ref|YP_738845.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7] gi|113889737|gb|ABI43788.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7] Length = 293 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 10/213 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGKR+RP L + M + A AIE IH +L+HDD+ LRRG+ Sbjct: 42 GGKRIRPFLVYSVGQMFGVSLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVH 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 + + T++L GD L + AF +V E + + +++V R + + +D+ Sbjct: 102 IAFDEATAILAGDALQTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLA 161 Query: 158 EEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 D L +K+ KT L S A+E++ + A Q + + +G+AFQ+ DD Sbjct: 162 STDKLIDLKALTQLHNMKTGALISCAVELALIAANAPKDEYQTMMEFAHAVGLAFQVQDD 221 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +LD E+GK G D + K T P +L Q Sbjct: 222 ILDIIATTEELGKPQGSDAESNKSTFPQLLGLQ 254 >gi|119953112|ref|YP_945322.1| dimethylallyltransferase [Borrelia turicatae 91E135] gi|119861883|gb|AAX17651.1| dimethylallyltransferase [Borrelia turicatae 91E135] Length = 348 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 109/212 (51%), Gaps = 12/212 (5%) Query: 37 LIFSGGKRLRPMLTLATALMLEYR---GDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +I GGKR+RPML + A L Y +N L+ +E H+ +L+ DD+ D + RRG Sbjct: 53 IINRGGKRIRPMLMILLAYALGYNKKNTENLYKLSMLLELPHSGSLIIDDIEDGAIKRRG 112 Query: 94 KVAARLVWGNQTSVLVGD---FLLSQAFCMVIETKSQEAL--EALSLVACTLAEGELRQL 148 K A L++G S+ + FL ++ KSQ+ L E L G+ + Sbjct: 113 KPAIHLIYGLDNSINTANLIYFLPAKLIQTSKLKKSQKLLIYENFFTTLSNLHLGQGIDI 172 Query: 149 SLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 +L + ++Y+ +++ KT+ LF A ++ ++ ++ + ++ + LG FQ+ Sbjct: 173 ALHNGTYIPNLDEYISLVELKTSCLFGMAGFLAGILTNNESKAKNLYNTF-LKLGTCFQI 231 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +DD+ + + +N GK+ G+D GK +LP+I Sbjct: 232 IDDIKNIKDGIN--GKDFGDDLIEGKKSLPII 261 >gi|152995175|ref|YP_001340010.1| polyprenyl synthetase [Marinomonas sp. MWYL1] gi|150836099|gb|ABR70075.1| Polyprenyl synthetase [Marinomonas sp. MWYL1] Length = 293 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 14/238 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSA 89 + + Y +F+GGKR+RPMLT A A + + A AIE IH +L+H +DD Sbjct: 33 NAMAYSLFNGGKRVRPMLTYAAASLFGEANNLTDASAAAIESIHAYSLIHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA--------CTLA 141 LRRGK + + T++L GD L + AF ++ K Q L L+ + Sbjct: 93 LRRGKPTCHIQYDEATAILAGDALQTFAFELLSNPKHQSTKVQLQLIQELVHASGRHGMV 152 Query: 142 EGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 G++ L+ + ++++ E + +H + KT L A++ + ++ G ++ + AL +Y Sbjct: 153 TGQMIDLANVGNSINIDELEQMH--QHKTGALIRASIRMGAISTGAKSEADFAALDAYAA 210 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD++D + +GK D KPT P +L +N I Sbjct: 211 AIGLAFQVQDDIIDITSDTTTLGKTQFSDEEANKPTYPKLLGLAGAQVLAQNLHSQAI 268 >gi|312963291|ref|ZP_07777774.1| geranyltranstransferase [Pseudomonas fluorescens WH6] gi|311282371|gb|EFQ60969.1| geranyltranstransferase [Pseudomonas fluorescens WH6] Length = 295 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 16/220 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP+L A L + ACA+E IH +L+HDD+ Sbjct: 33 EAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---------- 139 LRRG+ + ++L GD L S AF +++ + L T Sbjct: 93 LRRGQPTTHKAFDEAYAILAGDGLQSLAFSALLDPGLSSVNAEIRLRMVTALALAAGPAG 152 Query: 140 LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSY 197 + G+ + S+S LD +++H + KT L AA+++ +L +G + + AL++Y Sbjct: 153 MVGGQAIDMGSVSLKLDQQALEHMH--RHKTGALIEAAVQLGALASGRAEAAQLAALQTY 210 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +G+AFQ+ DD+LD + +GK G D KPT P Sbjct: 211 ARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250 >gi|86740094|ref|YP_480494.1| polyprenyl synthetase [Frankia sp. CcI3] gi|86566956|gb|ABD10765.1| Polyprenyl synthetase [Frankia sp. CcI3] Length = 634 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 82/288 (28%), Positives = 125/288 (43%), Gaps = 56/288 (19%) Query: 4 LEDLTLKDMEKVNFLILKRICS---------DVEMIP--DVVKYLIFSGGKRLRPMLTLA 52 + D T D+ + +L+R D ++IP + + + GKRLRP Sbjct: 243 VPDHTTVDVRRRVSAVLRRFAGSRGALLRGIDDDLIPFVRIATEFLLAEGKRLRPAF--- 299 Query: 53 TALMLEYRG------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-------- 98 +RG D V A AIE +H L+HDDV+D S RRG+ AA Sbjct: 300 --CYWGWRGAGGPDCDEIVTAAAAIELLHACALIHDDVMDASDTRRGRPAAHRRFSRVHR 357 Query: 99 -LVW-------GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR-QLS 149 W G ++L+GD L+ A ++ ++ + +LV G +R +L Sbjct: 358 TAGWRGDPADFGRSAAILLGDLFLAWADELLAASR----MPPEALVRAWPTYGRMRSELM 413 Query: 150 LSKNLDVT--EEDYLH----------VIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKS 196 + LD+ E H + + KTA L++ L+AG + A + Sbjct: 414 AGQYLDLVGQAEAGPHGGLDPGRAVRIARYKTAGYTVVRPLQLGGLLAGAPPDLLAAYAA 473 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+ LG AFQL DD+L G+ GK GED R+G+PT + LA R Sbjct: 474 FGLPLGEAFQLRDDLLGVFGDPAVTGKPTGEDLRDGRPTGLLALALTR 521 >gi|167647277|ref|YP_001684940.1| polyprenyl synthetase [Caulobacter sp. K31] gi|167349707|gb|ABZ72442.1| Polyprenyl synthetase [Caulobacter sp. K31] Length = 294 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 14/273 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L R + + ++Y GKRLRP L T M + + ACA+E IH + Sbjct: 22 LLPRADGPESRLTEAMRYAALGPGKRLRPFFALETGKMFDLPERPVLRAACALECIHAYS 81 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +RRG+ + + T++L GD L + AF ++ + + S + Sbjct: 82 LVHDDLPAMDDDDVRRGRPTVHIQYDEATAILAGDALQTAAFEIMAHPDTHDDGHVRSEL 141 Query: 137 ACTLA-EGELRQLSLSKNLDV--TEEDYLHVIKS---KTAVLFSAALEVSSLIAGVQNSV 190 LA + ++ + +D+ +D V + KT L + A E+ +IA ++S Sbjct: 142 VRKLAIASGAKGMAGGQMIDLLGVRDDLGAVARMQRLKTGALIAFAFEIPLIIARAKDSE 201 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI-GEDFRNGKPTLPVILAFQRGTKRE 249 R AL + +LG+A+Q+VDD+LD G+ +GK G+D GK +L +R Sbjct: 202 RSALMGFAQDLGLAYQIVDDILDEEGDEAVLGKAAGGKDAAKGKTNYVTLLGLDAAKERV 261 Query: 250 KNFWKSTINDGKI---SVENLKKA--FIIMREN 277 T + I E+L+++ F++ R N Sbjct: 262 NLLAAQTKSHLDIFGERAEHLRRSVDFVLDRRN 294 >gi|322691366|ref|YP_004220936.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456222|dbj|BAJ66844.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp. longum JCM 1217] Length = 360 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 105/224 (46%), Gaps = 31/224 (13%) Query: 41 GGKRLRPMLTL------ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 GGKRLR +L L A + ++R D + LACAIE TA L+HDD++D+S LRRGK Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDWR-DAMIDLACAIEVFQTAALVHDDIIDESDLRRGK 110 Query: 95 VAARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAE 142 +A G +++GD L + C+ I +S L +AL+ T+ Sbjct: 111 PSAHHALEQAVHSGAIGRGLGLMLGDILATA--CIEITRRSASRLPNTDALNEAFLTMQR 168 Query: 143 ----GELRQLSLS----KNLDVTEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQ 192 G++ L++ N + L+V + KTA + L + R Sbjct: 169 EVEIGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARH 228 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG+AFQL DD+LD G GK IG D R GK T+ Sbjct: 229 CALAVGRPLGLAFQLADDLLDVVGSSRNTGKPIGGDIREGKRTV 272 >gi|113868691|ref|YP_727180.1| geranylgeranyl pyrophosphate synthase [Ralstonia eutropha H16] gi|113527467|emb|CAJ93812.1| geranylgeranyl pyrophosphate synthase [Ralstonia eutropha H16] Length = 294 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 15/222 (6%) Query: 28 EMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 E +P + ++Y SGGKR+RP+L A + ACA+E IH +L+HDD Sbjct: 27 ETVPHTLHEAMRYAALSGGKRVRPLLVHAAGEVSGAAPAACDAAACAVEMIHAYSLVHDD 86 Query: 84 VVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTL 140 + LRRG+ + T++LVGD L +QAF ++ + L LVA L Sbjct: 87 MPCMDDDDLRRGRPTVHKAYDEATALLVGDALQTQAFIVLAGAGAIAPAARLQLVAELAL 146 Query: 141 AEGELRQLSLSKNLDV-------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 A G ++ + +D+ T E + + KT L A++ + +L + A Sbjct: 147 ASGST-GMAGGQAIDLQNVGRAMTREALEAMHRMKTGALLRASVRMGALCGEIDAEGLAA 205 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L Y +G+AFQ+VDD+LD + +GK G+D + KPT Sbjct: 206 LDRYAAAVGLAFQVVDDILDVTADTATLGKTAGKDAAHDKPT 247 >gi|266620367|ref|ZP_06113302.1| geranyltranstransferase [Clostridium hathewayi DSM 13479] gi|288868039|gb|EFD00338.1| geranyltranstransferase [Clostridium hathewayi DSM 13479] Length = 295 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 21/220 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D + Y + +GGKRLRPML T + G AIE IHT++L+HDD+ +D+ Sbjct: 34 DAMNYSVRAGGKRLRPMLMEETYRLFGGSGTVVEPFMAAIEMIHTSSLIHDDLPCMDNDE 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVACTLAE-- 142 LRRG + +G +VL GD LL A +ET ++ E + LA+ Sbjct: 94 LRRGLPTTWVKYGYDMAVLAGDSLLIYA----VETAAKAFALTEDAAVVGRCIGILAQKT 149 Query: 143 -------GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 G+ + L+ N V E + KT L +++ + +L+AG + ++ Sbjct: 150 GIYGMIGGQTVDVELT-NKPVPHEKLDFIYHLKTGALLESSMMIGALLAGADEEETRLVE 208 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +G+AFQ+ DD+LD + +GK + D +N K T Sbjct: 209 QMAAAIGLAFQIQDDILDVTSSMEVLGKPVLSDEKNNKTT 248 >gi|320449550|ref|YP_004201646.1| geranylgeranyl diphosphate synthetase [Thermus scotoductus SA-01] gi|320149719|gb|ADW21097.1| geranylgeranyl diphosphate synthetase [Thermus scotoductus SA-01] Length = 330 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 11/219 (5%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK LR +L + L + + A+E L+HDD+ D S RRG+ A + Sbjct: 38 GGKMLRGLLVVYAGLAHGATLEASLWAGTALELFQNWVLIHDDIEDGSEERRGRPALHRL 97 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVACTLAEGELRQL--SLSKN 153 + ++ GD L + + ++I ++ E L V A G+ L +LS Sbjct: 98 YPMPLALNAGDALHGEMWGLLIRGLNEGLFGPEVLAEFHQVVHRTAYGQHLDLLWTLSGR 157 Query: 154 LDVTEEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 LD+ EDYLH++ K A + A L + +L++G + + G+ LGIAFQ++DDVL Sbjct: 158 LDLAPEDYLHMVAHKAAYYTAVAPLRLGALLSG--KTPPALYEEAGLKLGIAFQIMDDVL 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + G+ GK + D GK TL +I Q K ++ Sbjct: 216 NLEGD-QAYGKELAGDLYEGKRTLILIRYLQEAPKEDRT 253 >gi|329888094|ref|ZP_08266692.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC 11568] gi|328846650|gb|EGF96212.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC 11568] Length = 303 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 117/247 (47%), Gaps = 25/247 (10%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L R + + ++Y GKRLRP + MLE + ACA+E +H + Sbjct: 31 LLPRADGPEARLTEAMRYAALGPGKRLRPFFAIEAGRMLEVEERAALRAACALECVHAYS 90 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +RRG+ + + T++L GD L + AF ++++ + + ++V Sbjct: 91 LVHDDLPAMDDDDVRRGRPTLHIAYDEATAILAGDALQTAAFDIILDEDTHDD----AVV 146 Query: 137 ACTLAEGELRQLSLSK-----------NLDVTEEDYLHVIKS---KTAVLFSAALEVSSL 182 C LA R+LS + +L +D V + KT LF+ A E+ + Sbjct: 147 RCELA----RRLSFASGARGMAGGQMIDLMGVRDDLGGVARMQRLKTGALFAYAFEIPLI 202 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI-GEDFRNGKPTLPVILA 241 IA + AL S+ ++G+A+Q+VDDVLD G EMGK G+D GK +L Sbjct: 203 IADANEAAWHALTSFAHDIGLAYQIVDDVLDAEGSAEEMGKAAGGKDAALGKTNFVTLLG 262 Query: 242 FQRGTKR 248 +R Sbjct: 263 VDAARQR 269 >gi|149176626|ref|ZP_01855238.1| polyprenyl synthetase [Planctomyces maris DSM 8797] gi|148844505|gb|EDL58856.1| polyprenyl synthetase [Planctomyces maris DSM 8797] Length = 611 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 20/199 (10%) Query: 41 GGKRLRPMLTLAT--ALMLEYRGDNHV---------LLACAIEFIHTATLLHDDVVDDSA 89 GGKR RP +TLA AL+ + D+ A AIE H A+L+HDD+ DD Sbjct: 297 GGKRFRPFITLAAYDALIKAQQADDTAETTYPLGVQKAAMAIEVFHKASLIHDDIEDDDQ 356 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-------SQEALEALSLVACTLAE 142 R G+ G ++ +GD+L+ + ++ E + + + +E +S L E Sbjct: 357 YRYGRETLHRQHGTGMAINIGDYLIGVGYRLLNEARADIGAEAASDLIEKMSAAHIRLCE 416 Query: 143 GELRQLSL--SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ +++ S+ ++ D L + KT+ F AAL + G + + S+ + Sbjct: 417 GQGAEMAWQESETFELAPLDALQIYALKTSPAFEAALYAGIRMTGSVGEYEELISSFSRH 476 Query: 201 LGIAFQLVDDVLDYRGEVN 219 +G+ FQ+++D+ D++G+ N Sbjct: 477 IGVGFQILNDLKDWQGDDN 495 >gi|308095603|ref|ZP_05907188.2| geranyltranstransferase [Vibrio parahaemolyticus Peru-466] gi|308125727|ref|ZP_05776964.2| geranyltranstransferase [Vibrio parahaemolyticus K5030] gi|308086887|gb|EFO36582.1| geranyltranstransferase [Vibrio parahaemolyticus Peru-466] gi|308113754|gb|EFO51294.1| geranyltranstransferase [Vibrio parahaemolyticus K5030] Length = 295 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 14/239 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSAL 90 +KY + GGKR+RP L T ML + ++ A AIE IH +L+H +DD L Sbjct: 34 AMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----------ALSLVACTL 140 RRG+ + + T++L GD L + AF ++ + + E A S A + Sbjct: 94 RRGQPTCHIKFDEATAILTGDALQTLAFTIIADGPLSPSAENQRVNMIKALAHSSGANGM 153 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 G+ L ++N V+ + + + KT L A+++ +L AG + V L+ Y Sbjct: 154 CVGQALDLG-AENRQVSLAEMEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSK 212 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L + ++ + + Sbjct: 213 AIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLLGLEGAIEKAHTLLQEALQ 271 >gi|227547664|ref|ZP_03977713.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227211919|gb|EEI79815.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 360 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 105/224 (46%), Gaps = 31/224 (13%) Query: 41 GGKRLRPMLTL------ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 GGKRLR +L L A + ++R D + LACAIE TA L+HDD++D+S LRRGK Sbjct: 52 GGKRLRALLALDAFDVLAGDVTPDWR-DAMIDLACAIEVFQTAALVHDDIIDESDLRRGK 110 Query: 95 VAARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAE 142 +A G +++GD L + C+ I +S L +AL+ T+ Sbjct: 111 PSAHHALEQAVHSGAIGRGLGLMLGDILATA--CIEITRRSASRLPNTDALNEAFLTMQR 168 Query: 143 ----GELRQLSLS----KNLDVTEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQ 192 G++ L++ N + L+V + KTA + L + R Sbjct: 169 EVEIGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARH 228 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG+AFQL DD+LD G GK IG D R GK T+ Sbjct: 229 CALAVGRPLGLAFQLADDLLDVVGSSRNTGKPIGGDIREGKRTV 272 >gi|56461237|ref|YP_156518.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] gi|56180247|gb|AAV82969.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] Length = 295 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 18/271 (6%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + LT E+V+ LK+ + + + P +++ + GGKR+RP L + A + Sbjct: 3 INSLTAATREQVDSF-LKQALAQLTLNPRLNQAMQHGVLMGGKRIRPYLLVTVADICGAN 61 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 ++ + A A+E IH +L+HDD+ LRRG+ + + T++L GD L + AF Sbjct: 62 KNDALQAAAAVELIHAYSLIHDDLPAMDDDDLRRGQPTCHIAYDEATAILAGDALQTLAF 121 Query: 119 CMVIETKSQE--ALEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKT 169 ++ E + ++ + L LV R + + +D VTE+ + SKT Sbjct: 122 EVLTENRMEQLPSERQLQLVQVLAKASGARGMCAGQAIDLQATAKIVTEDALEQMHLSKT 181 Query: 170 AVLFSAALEVSSLIAGVQNSV--RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 L +AA + ++ G N+ R+ + + LG+AFQ+ DD+LD G +GK G Sbjct: 182 GALITAAATMG-VLCGNDNAQQWREKFEQFAHYLGLAFQVQDDILDVTGNTEALGKPQGS 240 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 D + K T +L + +R +N + Sbjct: 241 DTASEKSTYVRLLGIEGAQQRLQNLHHKALQ 271 >gi|27377259|ref|NP_768788.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110] gi|27350402|dbj|BAC47413.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110] Length = 335 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/313 (27%), Positives = 148/313 (47%), Gaps = 37/313 (11%) Query: 2 KMLEDLTLKD-MEKVNFLILKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 ++L ++ ++D ++V + + +C++ E++ ++Y GGKR R +L LA + Sbjct: 33 RLLPEIWMQDGAKRVEEALARLLCAEDDGETELMA-AMRYATLHGGKRTRALLCLAAGAL 91 Query: 57 LEYRGDNHVL--LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDF 112 + H+L + AIE +H TL+HDD+ +DD LRRG + +G T++LVGD Sbjct: 92 ADTPA--HMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDA 149 Query: 113 LLSQAFCMVIETKSQEALEALSLV--------ACTLAEGELRQLSL-SKNLDVTEEDYLH 163 L + AF + + + + ++LV A A G+ LSL K++++ +H Sbjct: 150 LQAHAF-LTLASLNAPGDSPIALVRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMH 208 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQAL----KSYGMNLGIAFQLVDDVLDYRGEVN 219 +KS L A++ + +L A N+ AL Y G+A Q++DD+LD + Sbjct: 209 RMKS--GALVRASVRMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTADTA 266 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK-----AFIIM 274 +GK G+D KPT I+ Q + F + D ++ L A +I Sbjct: 267 ALGKTPGKDAAAQKPTCASIMGLQEA----RQFALDLLRDAGEAIAPLGPRAERLAQLIQ 322 Query: 275 RENRALVDTEYRA 287 R N L RA Sbjct: 323 RANAYLFKHAPRA 335 >gi|317482452|ref|ZP_07941469.1| polyprenyl synthetase [Bifidobacterium sp. 12_1_47BFAA] gi|316916112|gb|EFV37517.1| polyprenyl synthetase [Bifidobacterium sp. 12_1_47BFAA] Length = 360 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 103/223 (46%), Gaps = 29/223 (13%) Query: 41 GGKRLRPMLTLATALML-----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGKRLR +L L +L R D + LACAIE TA L+HDD++D+S LRRGK Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 111 Query: 96 AARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAE- 142 +A G +++GD L + C+ I +S L +AL+ T+ Sbjct: 112 SAHHALEQAVHSGAIGRGLGLMLGDILATA--CIEITRRSASRLPNTDALNEAFLTMQRE 169 Query: 143 ---GELRQLSLS----KNLDVTEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQA 193 G++ L++ N + L+V + KTA + L + R Sbjct: 170 VEIGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHC 229 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG+AFQL DD+LD G GK IG D R GK T+ Sbjct: 230 ALAVGRPLGLAFQLADDLLDVVGSSRNTGKPIGGDIRKGKRTV 272 >gi|134101439|ref|YP_001107100.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291008114|ref|ZP_06566087.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133914062|emb|CAM04175.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 345 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 5/205 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +RP L L + + V A A+E +H +LLHDDV+D RR + A V+ Sbjct: 62 GKAIRPALALLASEAVGGSATAAVPAAVAVELVHNFSLLHDDVMDGDRTRRHRPTAWTVF 121 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDVTE 158 G +VLVGD LLS A ++ ++ A +A+ L+ L G+ ++ V Sbjct: 122 GIGNAVLVGDVLLSLACDVLAASEHPSATKAIRLLTDAVQRLVAGQFVDIAFQDRRAVQL 181 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIA-GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 ++ + + ++KT L AA + ++ G V +++G +G+AFQ VDD+L G+ Sbjct: 182 DECVSMAENKTGALLGAACALGTIFGDGTAQQVDHQ-RAFGEGVGLAFQHVDDLLGIWGD 240 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAF 242 GK+ D R K +LPV+ A Sbjct: 241 PARTGKSAFSDLRTRKKSLPVVAAL 265 >gi|260773301|ref|ZP_05882217.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio metschnikovii CIP 69.14] gi|260612440|gb|EEX37643.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio metschnikovii CIP 69.14] Length = 261 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 12/222 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y + GGKR RP L T ML + + ACA+E +H +L+HDD+ LR Sbjct: 1 MRYGLLLGGKRARPYLVYITGQMLGCQLTDLDTPACAVECVHAYSLIHDDLPAMDDDDLR 60 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL-VACTLAEGELRQ-LS 149 RGK + + T++L GD L + AF ++ E + E + + LAE Q + Sbjct: 61 RGKPTCHIKFDEATAILTGDALQTLAFTILAEGQLSTHGETNRIKMVQALAEASGAQGMC 120 Query: 150 LSKNLDVTEE------DYLHVIK-SKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMNL 201 L + LD+ E D L I +KT L A+ + ++ AG + ++ L Y + Sbjct: 121 LGQALDLAAENRRITLDELETIHHNKTGALMRCAIRMGAMAAGQKGLAILPQLDRYAAAV 180 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+AFQ+ DD+LD + +GK G D + K T P +L + Sbjct: 181 GLAFQVQDDILDIISDTETLGKPQGSDQQLHKSTYPALLGLE 222 >gi|218294741|ref|ZP_03495595.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23] gi|218244649|gb|EED11173.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23] Length = 330 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 105/219 (47%), Gaps = 11/219 (5%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK LR +LT +AL + +L +E L+HDD+ D S RRG+ A + Sbjct: 38 GGKMLRGLLTYYSALAHGAPEEAALLAGEGLELFQNWVLIHDDIEDGSEERRGRPALHRL 97 Query: 101 WGNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVACTLAEGELRQL--SLSKN 153 ++ GD L + + ++ E + S E L V A G+ L +L+ Sbjct: 98 HPMPLALNAGDALHGEMWGLLAEGVARGSLSPEVLLEFHQVVRRTAYGQHLDLLWTLTGR 157 Query: 154 LDVTEEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 LD+T EDYL ++ K A + A L + +L+AG N+ + G+ LG AFQ+VDDVL Sbjct: 158 LDLTPEDYLRMVAHKAAYYTAVAPLRLGALLAG--NTPHPLYEEAGLKLGTAFQIVDDVL 215 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + G+ GK D GK TL +I + T E+ Sbjct: 216 NLEGD-EAYGKERAGDLYEGKRTLILIRFLEEATLEERQ 253 >gi|117921341|ref|YP_870533.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3] gi|117613673|gb|ABK49127.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3] Length = 293 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 10/213 (4%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGKR+RP L + M + A AIE IH +L+HDD+ LRRG+ Sbjct: 42 GGKRIRPFLVYSVGQMFGVPLEKLDASAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVH 101 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 + + T++L GD L + AF +V E + + +++V R + + +D+ Sbjct: 102 IAFDEATAILAGDALQTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLA 161 Query: 158 EEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 D L +K+ KT L S A+E++ + A Q + + +G+AFQ+ DD Sbjct: 162 STDKLIDLKALTQLHNMKTGALISCAVELALIAANAPKDEYQTMMEFAHAVGLAFQVQDD 221 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +LD E+GK G D + K T P +L Q Sbjct: 222 ILDIIATTEELGKPQGSDAESNKSTFPQLLGLQ 254 >gi|218682196|ref|ZP_03529797.1| Polyprenyl synthetase [Rhizobium etli CIAT 894] Length = 304 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 10/219 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + Y + +GGKR+RP L + +A + + + A+E +H +L+HDD+ Sbjct: 40 ETLRSAMHYAVLNGGKRMRPFLVVESAALFGGDAGAALRVGAALECVHCYSLVHDDLPAM 99 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSLVAC 138 LRRGK + + T++L GD LL+ AF ++ +T + AL+ A Sbjct: 100 DDDDLRRGKPTVHIKFDEATAILAGDSLLTYAFDIIAAPETALPDTSKAALVLALARAAG 159 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + L L+ +E + +++ KT L A E ++I+ R L+++ Sbjct: 160 LGGMAGGQALDLAAERQAPDEAGIIRLQAMKTGALIRFACEAGAIISAGSPDDRLRLRAF 219 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 G +G+AFQL DD+LD + MGK G+D GK TL Sbjct: 220 GEKIGLAFQLADDILDLTSDTATMGKATGKDAARGKGTL 258 >gi|162448856|ref|YP_001611223.1| farnesyltranstransferase [Sorangium cellulosum 'So ce 56'] gi|161159438|emb|CAN90743.1| Farnesyltranstransferase [Sorangium cellulosum 'So ce 56'] Length = 303 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 22/231 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 ++ +F GG R+RP L LA A + + A A+E IH A+L+HDD+ DD+ Sbjct: 30 ATQHAVFPGGARIRPRLCLAVASAYGDPAPEAADAAAAAVELIHCASLVHDDLPCFDDAP 89 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----------TKSQEALEALSLVA-- 137 +RRG+ + +G +VL GD L+ AF + T ++ A+ ++ Sbjct: 90 IRRGRPSVHRAFGEPIAVLAGDQLIVLAFEALARGAFHAMASGVTDARRAVRFFEVLGGG 149 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + +G + + V Y ++KT LF AA + +L AG + A Sbjct: 150 VGMPQGIIAGQAWESEAKVPLSAYR---RAKTGALFEAAATLGALSAGQDGA---AWGDL 203 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 G +G A+Q+ DDVLD G +MGK G D G+P + L GT R Sbjct: 204 GQRIGEAYQVADDVLDLVGRPEDMGKPAGRDGALGRPNTALELGLS-GTTR 253 >gi|2497459|sp|Q45220|ISPA_BRAJA RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|529967|gb|AAC28894.1| putative dimethylallyltranstransferase; ORF6; similar to E. coli dimethylallyltranstransferase, Swiss-Prot Accession Number P22939 (Fujisaki et al., J. Biochem. 108:995-1000(1990) [Bradyrhizobium japonicum USDA 110] Length = 332 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/313 (27%), Positives = 148/313 (47%), Gaps = 37/313 (11%) Query: 2 KMLEDLTLKD-MEKVNFLILKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 ++L ++ ++D ++V + + +C++ E++ ++Y GGKR R +L LA + Sbjct: 30 RLLPEIWMQDGAKRVEEALARLLCAEDDGETELMA-AMRYATLHGGKRTRALLCLAAGAL 88 Query: 57 LEYRGDNHVL--LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDF 112 + H+L + AIE +H TL+HDD+ +DD LRRG + +G T++LVGD Sbjct: 89 ADT--PAHMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDA 146 Query: 113 LLSQAFCMVIETKSQEALEALSLV--------ACTLAEGELRQLSL-SKNLDVTEEDYLH 163 L + AF + + + + ++LV A A G+ LSL K++++ +H Sbjct: 147 LQAHAF-LTLASLNAPGDSPIALVRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMH 205 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQAL----KSYGMNLGIAFQLVDDVLDYRGEVN 219 +KS L A++ + +L A N+ AL Y G+A Q++DD+LD + Sbjct: 206 RMKS--GALVRASVRMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTADTA 263 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK-----AFIIM 274 +GK G+D KPT I+ Q + F + D ++ L A +I Sbjct: 264 ALGKTPGKDAAAQKPTCASIMGLQEA----RQFALDLLRDAGEAIAPLGPRAERLAQLIQ 319 Query: 275 RENRALVDTEYRA 287 R N L RA Sbjct: 320 RANAYLFKHAPRA 332 >gi|167566511|ref|ZP_02359427.1| geranyltranstransferase [Burkholderia oklahomensis EO147] Length = 248 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 12/181 (6%) Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---- 126 IH +L+HDD+ +DD ALRRGK + + T++LVGD L SQAF + + + Sbjct: 29 MIHVYSLVHDDMPCMDDDALRRGKPTVHVEYDEATALLVGDALQSQAFVALTDAAALPLD 88 Query: 127 -QEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLI 183 Q AL L+L + ++ + + L+ D L + + KT L A++ + +L Sbjct: 89 RQPALVRELALASGSIGMAGGQAIDLASVGHALSRDALETMHRMKTGALLRASVRMGAL- 147 Query: 184 AGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 AG S +AL +Y +G+AFQ+VDD+LD + +GK G+D N KPT I+ Sbjct: 148 AGETPSEDAMRALDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIG 207 Query: 242 F 242 Sbjct: 208 L 208 >gi|329851866|ref|ZP_08266547.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] gi|328839715|gb|EGF89288.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] Length = 303 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 19/233 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSA 89 + ++Y GKRLRP L TA + + + + ACA+E IH +L+H +DD Sbjct: 44 EAMRYAALGPGKRLRPFFALETARLFDADENAVLRAACALECIHAYSLVHDDLPCMDDDD 103 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 +RRG++ + T+VLVGD L S AF E + E LV C L L Q S Sbjct: 104 IRRGRLTVHRAYDEATAVLVGDALQSVAF----EILASEDTHDDPLVRCELVR-MLAQAS 158 Query: 150 LSKNLD-------VTEEDYLHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 ++ + + D L + + KT L A ++ ++A V + + Sbjct: 159 GAQGMAGGQMIDLIGVHDDLGGVARMQRLKTGALIVYAFQIPLVVADVGEREGMVMTHFA 218 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNI-GEDFRNGKPTLPVILAFQRGTKREK 250 +LG+A+Q+ DDVLD G+ EMGK G+D GK +L R K Sbjct: 219 QDLGLAYQIADDVLDIEGDPEEMGKAASGKDAAKGKTNFVTLLGLDEAKSRVK 271 >gi|299143832|ref|ZP_07036912.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518317|gb|EFI42056.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 290 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 32/225 (14%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--V 85 + + + Y + SGGKR+RP+L+L + D +L A AIE IHT +L+HDD+ + Sbjct: 34 VYESMSYSLSSGGKRVRPLLSLLAYKSVSGSEDFTKILPFATAIELIHTYSLIHDDLPAM 93 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------------ALEAL 133 D+ LRRGK V+ ++L GD LL+ M E S+E A++A+ Sbjct: 94 DNDDLRRGKPTNHKVYSEAIAILAGDGLLN----MSAEVMSRELDKYDEMDELKRAIKAM 149 Query: 134 SLVACT-----LAEGEL--RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + + G++ + + NLD+ E Y K KTA L AA+ ++IAG Sbjct: 150 KYIFTASGVHGMIGGQVIDMEYGYNMNLDICESMY----KLKTAALIKAAIVSGAIIAGA 205 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + + Y +GIA+Q+ DD+LD + ++ KN +FR+ Sbjct: 206 SDEEIATFEEYANCIGIAYQIRDDILDLEAD-SKKEKNTMVNFRS 249 >gi|290790227|pdb|3LK5|A Chain A, Crystal Structure Of Putative Geranylgeranyl Pyrophosphate Synthase From Corynebacterium Glutamicum gi|325054159|pdb|3QQV|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Corynebacterium Glutamicum Complexed With Isoprenyl Diphosphate And Magnesium Length = 380 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 79/250 (31%), Positives = 117/250 (46%), Gaps = 31/250 (12%) Query: 30 IPDVVKYL---IFSGGKRLRPMLTLATALMLEYRGDNHVLL------ACAIEFIHTATLL 80 + D V +L + +GGKR+RP+ A L + ++ L A ++EFI L+ Sbjct: 47 VTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALI 106 Query: 81 HDDVVDDSALRRG-KVAARLV---------------WGNQTSVLVGDFLLSQAFCMVIET 124 HDD++D S RRG R V +G S+L GD L A + ++ Sbjct: 107 HDDIIDSSDTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDXALVWAEDXLQDS 166 Query: 125 K-SQEAL----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA-ALE 178 S EAL +A + G+L + L + + + E V + KTA A L Sbjct: 167 GLSAEALARTRDAWRGXRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLH 226 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + IAG + AL YG ++GIAFQL DD+L G+ GK G+D R GK T+ + Sbjct: 227 LGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGDPAITGKPAGDDIREGKRTVLL 286 Query: 239 ILAFQRGTKR 248 LA QR K+ Sbjct: 287 ALALQRADKQ 296 >gi|88799582|ref|ZP_01115158.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Reinekea sp. MED297] gi|88777667|gb|EAR08866.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Reinekea sp. MED297] Length = 293 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 107/218 (49%), Gaps = 14/218 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDD 87 + + Y + +GGKRLRP L A + ++ ++ A A+E IH +L+H +DD Sbjct: 30 LTSAIHYSLLNGGKRLRPSLVRAASDLVRAPDGLWLIPAQALEMIHVYSLVHDDLPAMDD 89 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--------LEALSLVACT 139 LRRGK + T++L GD L S+AF ++ ++ L A S A Sbjct: 90 DDLRRGKPTCHRQFSEATAILAGDALQSEAFALIAGAEALSPRQIRDMVRLLAQSAGARG 149 Query: 140 LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA-GVQNSVRQALKSY 197 + G++ L S K L + E LH + KT L SA+L++ +L V + L Y Sbjct: 150 MVGGQMIDLASEQKTLTLNELSDLHRL--KTGALISASLQLGALCHDSVDVEILARLARY 207 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 G +G+AFQ+ DD+LD G ++GK G D K T Sbjct: 208 GDAIGLAFQIADDILDVTGTTEKLGKPQGSDLAAEKST 245 >gi|290580921|ref|YP_003485313.1| putative farnesyl diphosphate synthase [Streptococcus mutans NN2025] gi|254997820|dbj|BAH88421.1| putative farnesyl diphosphate synthase [Streptococcus mutans NN2025] Length = 289 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 17/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDV--V 85 + V Y + +GGKR+RP+L L +L+ G + H +A ++E IHT +L+HDD+ + Sbjct: 27 EAVLYSVAAGGKRIRPLLLLE---ILQGFGLVLTEAHYQVAASLEMIHTGSLVHDDLPAM 83 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D+ RRG++ +G T++L GD L F ++ + + ++ + + A G Sbjct: 84 DNDDYRRGQLTNHKKFGETTAILAGDSLFLDPFGLLAKADLRADIKIKLVAELSDAAGSY 143 Query: 146 RQLSLSKNLDVTEE------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + LD+ E D L I + KT L + + +IA + L+ G Sbjct: 144 GMVG-GQMLDIKGEHVQLNLDQLAQIHANKTGKLLTFPFVAAGIIAELSEKALARLRQVG 202 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ+ DD+LD +E+GK +D K T P +L + Sbjct: 203 ELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKSTYPSLLGLDK 248 >gi|120610694|ref|YP_970372.1| farnesyl-diphosphate synthase [Acidovorax citrulli AAC00-1] gi|120589158|gb|ABM32598.1| farnesyl-diphosphate synthase [Acidovorax citrulli AAC00-1] Length = 306 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y + GKRLRP+L LA A + + AC++E IH +L+HDD+ +D+ Sbjct: 46 DAMRYAVLGAGKRLRPLLVLAAAEAVSGHAGAALRAACSVELIHAYSLVHDDMPCMDNDV 105 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRGK + +G ++L GD L QA + T + EA+ C L Sbjct: 106 LRRGKPTVHVQFGQAQALLAGDAL--QALAFELLTPEDDVPEAMQARLCRLLARAAGADG 163 Query: 150 L---------SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + S + ++E++ + + KT L +++ + + V + AL YG Sbjct: 164 MAGGQAIDLASVGVALSEDELRRMHRLKTGALLQSSVLMGAACGAVAPAAWDALSRYGAA 223 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 LG+AFQ+VDDVLD + +GK G+D + KPT Sbjct: 224 LGLAFQVVDDVLDVVADSATLGKTAGKDAASDKPT 258 >gi|21328644|gb|AAM48650.1| geranylgeranyl pyrophosphate synthetase [uncultured marine proteobacterium] Length = 295 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 16/235 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--D 86 ++Y + GG R+RP + ++ A GD+ L A A+E IH A+L+HDD+ D Sbjct: 30 ALRYAVSPGGARIRPTILMSVAAAC---GDDRPELTNAAAAALECIHCASLVHDDLPCFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE--GE 144 D+ RRGK + + +VL GD L+ AF ++ S + A+ L+ LAE G Sbjct: 87 DAETRRGKPSLHRAYSEPLAVLAGDSLIVMAFQILTRHASIDPQRAIGLMN-ILAEQTGM 145 Query: 145 LRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + + ++ D ++KT LF AA ++ ++ AG + L G +G Sbjct: 146 PNGICAGQGWESEQKIDLRAYHRAKTGALFVAATQMGAIAAGQDGAQWDEL---GSRIGE 202 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 AFQ+ DD+ D E+GK G+D +G+P + KN I+ Sbjct: 203 AFQVADDLRDALYNEAELGKPAGQDDLHGRPNAVAEYGIEGAISHMKNILGGAIS 257 >gi|302383899|ref|YP_003819722.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302194527|gb|ADL02099.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 301 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 15/262 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + + ++Y GKRLRP + + + + + ACA+E +H +L+HDD+ Sbjct: 41 LTEAMRYAALGPGKRLRPYFAMEASRLFDIEERPVLRAACALECVHAYSLVHDDLPCMDD 100 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--TLAEGEL 145 +RRG+ + T+VL GD L + AF +++ + E +A +LA G Sbjct: 101 DDMRRGRPTLHRAYDEATAVLAGDALQTAAFDILLHEDTHEDANIRCALAARLSLASGA- 159 Query: 146 RQLSLSKNLDVTE-----EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 R ++ + +D+ E + + KT LF+ A E+ ++A QAL + + Sbjct: 160 RGMAGGQMVDLLGVRDDLEGVARMQRLKTGALFTYAFEIPLIVARANERHCQALTDFAHD 219 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF---WKSTI 257 +G+A+Q+VDD+LD+ G+ +GK +D GK +L + R + + Sbjct: 220 IGLAYQIVDDLLDFDGDEAVLGKAAQKDAAQGKTNFVTLLGVDQARHRVAQLADQARGHL 279 Query: 258 NDGKISVENLKKA--FIIMREN 277 + ENLK + F++ R + Sbjct: 280 DVFGPDAENLKASVDFVLNRRS 301 >gi|319778271|ref|YP_004129184.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9] gi|317108295|gb|ADU91041.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9] Length = 303 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 37/299 (12%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 D L+++ K + L+ I S + +P +V++Y GKRLR L LAT + + Sbjct: 11 DSWLEEVVKFSNRHLEEIFSSLHDVPPKLLEVMRYATLGPGKRLRAALVLATYEVFQTTS 70 Query: 62 ----DNHV-LLACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSV------- 107 D+++ + C+IE IH +L+HDD+ LRRG+ + +G ++ Sbjct: 71 PDSYDDYISRVVCSIELIHAYSLVHDDLPCMDDDDLRRGRPTCHVKYGEAMALLAADALQ 130 Query: 108 -LVGDFLL-SQAFCMVIETKSQEALEALSLVACTLAEGELRQ-LSLSKNLDVTEEDYLHV 164 L + LL S ++ + ++E L A A + G++ L++S ++D+ +H Sbjct: 131 PLSYEHLLGSHIDSKLLVSSTKELLRATG--ATGMVGGQVIDILNISNHMDLEALKDMH- 187 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 KT L A +EV S++ + + LK Y +GIA+Q+VDD+LD + + +GK Sbjct: 188 -SRKTGALIQACVEVVSILFKDSSLYYEELKRYSEYIGIAYQVVDDILDATQDSDTLGKT 246 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA--------FIIMR 275 G+D +N KPT IL G +N KS + S+E++ + +IIMR Sbjct: 247 AGKDQQNNKPTYVTIL----GLDEARNLAKSLYENALKSLESVPNSNRLKELAHYIIMR 301 >gi|119504024|ref|ZP_01626105.1| IdsA [marine gamma proteobacterium HTCC2080] gi|119460027|gb|EAW41121.1| IdsA [marine gamma proteobacterium HTCC2080] Length = 346 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 79/300 (26%), Positives = 136/300 (45%), Gaps = 24/300 (8%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GG+ RP L +ATA + + + A +IE +H A L+HDD+ D+S RRGK Sbjct: 50 GGRMFRPSLCIATAKVFGASLEQVIPAAVSIELLHNALLIHDDIEDESDERRGKPTLHKK 109 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEA-------LEALSLVACTLAEGELRQLSLSKN 153 G ++ GD L + +I + LE +A AEG+ L ++ Sbjct: 110 IGTPLALNAGDSLAFLSLRPIIRGSASMGSDSIVRILEEFDQMAQQTAEGQALDLGWRRD 169 Query: 154 --LDVTEEDYLHVIKSKTAVLFSA-ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 +++ E DYL ++ KT L + + + +LI + +L ++ LG AFQ+ DD Sbjct: 170 NHIELCEADYLKMVLKKTCWLTTLFPIRLGALIGSGGRANLDSLFNFAFFLGAAFQIQDD 229 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK-----ISVE 265 VL+ G GK +G D GK TL ++ + + E+ K+ ++ + SV Sbjct: 230 VLNLIGNHERYGKELGGDLLEGKRTLMLVNLLELSSSSERVRIKAILDTPRDARSDASVS 289 Query: 266 NLKKAFIIMRENRALVDTEYR-----AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 L+ A I R ++ A + + + + LP+SS K L ++ + ++R Sbjct: 290 WLRSAMI----ERGCIEYAKELAHGLAGAASHEFDKTFKELPESSDKAFLSKLPSWVIER 345 >gi|47531118|gb|AAT35222.1| fusion of carotene synthesis proteins [synthetic construct] Length = 1798 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 95/201 (47%), Gaps = 16/201 (7%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 S GKR R ML L A D V ACA+E +H A+L+ DD+ +DD+ LRRG+ A Sbjct: 362 LSSGKRFRGMLMLLAAEASGGVCDTIVDAACAVEMVHAASLIFDDLPCMDDAGLRRGQPA 421 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT--------LAEGELRQL 148 + G +VL G L+++A ++ + LV L G+ L Sbjct: 422 THVAHGESRAVLGGIALITEAMALLAGARGASGTVRAQLVRILSRSLGPQGLCAGQDLDL 481 Query: 149 SLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 +KN V +E L KT VLF A LE+ ++I + + +G LG FQ Sbjct: 482 HAAKNGAGVEQEQDL-----KTGVLFIAGLEMLAVIKEFDAEEQTQMIDFGRQLGRVFQS 536 Query: 208 VDDVLDYRGEVNEMGKNIGED 228 DD+L+ G+ +GK+ G D Sbjct: 537 YDDLLEVVGDQAALGKDTGRD 557 >gi|28897461|ref|NP_797066.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633] gi|260876421|ref|ZP_05888776.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034] gi|28805673|dbj|BAC58950.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633] gi|308092915|gb|EFO42610.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034] Length = 294 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 14/239 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSAL 90 +KY + GGKR+RP L T ML + ++ A AIE IH +L+H +DD L Sbjct: 33 AMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDL 92 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----------ALSLVACTL 140 RRG+ + + T++L GD L + AF ++ + + E A S A + Sbjct: 93 RRGQPTCHIKFDEATAILTGDALQTLAFTIIADGPLSPSAENQRVNMIKALAHSSGANGM 152 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 G+ L ++N V+ + + + KT L A+++ +L AG + V L+ Y Sbjct: 153 CVGQALDLG-AENRQVSLAEMEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSK 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L + ++ + + Sbjct: 212 AIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLLGLEGAIEKAHTLLQEALQ 270 >gi|228476852|ref|ZP_04061497.1| geranyltranstransferase [Streptococcus salivarius SK126] gi|228251426|gb|EEK10571.1| geranyltranstransferase [Streptococcus salivarius SK126] Length = 290 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/252 (27%), Positives = 120/252 (47%), Gaps = 35/252 (13%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDVVDDSAL- 90 Y + SGGKR+RP++ L +LE G +H +A ++E IHT +L+HDD+ Sbjct: 32 YSVDSGGKRIRPLIFLD---LLEGFGLELTPSHFDVAASLEMIHTGSLIHDDLPAMDDDD 88 Query: 91 -RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVACTLA--- 141 RRG++ + T++L GD L F ++ +T + ++ LS + T Sbjct: 89 YRRGRLTNHKKFDEATAILAGDSLFLDPFDLLAQTDLSAEIRVQLIQVLSHSSGTFGMVG 148 Query: 142 ------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 +GE ++L LS+ + E KT L + + ++A V + L+ Sbjct: 149 GQMLDMKGEGQELDLSQLAKIHEH--------KTGKLLTFPFVAAGIVAQKDQQVLENLQ 200 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 G +G+AFQ+ DD+LD + E+GK G+D GK T P +L G ++ + Sbjct: 201 EAGHLIGLAFQVRDDILDVTADFEELGKTPGKDVVAGKSTYPALL----GLEKSHAILEE 256 Query: 256 TINDGKISVENL 267 ++N + +NL Sbjct: 257 SLNKAEAIFQNL 268 >gi|283783163|ref|YP_003373917.1| polyprenyl synthetase [Gardnerella vaginalis 409-05] gi|298253930|ref|ZP_06977517.1| geranylgeranyl pyrophosphate synthase [Gardnerella vaginalis 5-1] gi|283441784|gb|ADB14250.1| polyprenyl synthetase [Gardnerella vaginalis 409-05] gi|297532073|gb|EFH71048.1| geranylgeranyl pyrophosphate synthase [Gardnerella vaginalis 5-1] Length = 368 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 39/284 (13%) Query: 6 DLTLKDME-KVNFLILKRICSDVE---------MIPDVVKYLIFS--GGKRLRPMLTLAT 53 + +L D+E ++ FLI ++ + +E ++ V+K I S GGKRLR +LT++ Sbjct: 8 NYSLNDIESRITFLISQQFNTGLENNLSSTCAQILQQVIKQAIVSSEGGKRLRALLTISA 67 Query: 54 ALMLEYRGDNHVL-------LACAIEFIHTATLLHDDVVDDSALRRGKVAARL----VWG 102 + + +ACA+E TA L+HDD++D+S LRRGK +A V Sbjct: 68 FYAASKETNIQKIHEQSVFDIACALEVFQTAALIHDDIIDESYLRRGKPSAYCALSKVCN 127 Query: 103 NQ-----TSVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVACTLAEGELRQLSLS- 151 N+ +++GD L +++F + T +E L A + + + G++ LS+ Sbjct: 128 NKHIGTGLGLMLGDLLATESFDIARNRAKNFTYGEELLAAFASMQRNVGIGQVLDLSIEM 187 Query: 152 ---KNLDVTEEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQAL-KSYGMNLGIAFQ 206 N E L+V + KTA + A L + L A +Q + L S G +LG+AFQ Sbjct: 188 MQLDNPIQLAESSLNVFRWKTASYTTVAPLTLGFLAANMQPTEAYNLANSIGNSLGVAFQ 247 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD+LD + GK IG D R GK + + A Q G E+ Sbjct: 248 IADDLLDIVSDSKITGKPIGGDIREGKRAVLLADALQYGNDNER 291 >gi|269958629|ref|YP_003328416.1| geranyltranstransferase [Anaplasma centrale str. Israel] gi|269848458|gb|ACZ49102.1| geranyltranstransferase [Anaplasma centrale str. Israel] Length = 290 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 24/204 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + + Y I + GK +R L +A + + + L AIE +H +L+HDD+ +D+S Sbjct: 44 EALSYTISNPGKCIRSFLASTSARVFGVSAERTLRLGAAIEAVHAYSLVHDDLPSMDNSP 103 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-------------CMVIETKSQEALEALSLV 136 RRG+ + +G +VL GD LL+ F C +IE S+ + Sbjct: 104 TRRGRESCHTKFGEAVAVLTGDALLTLTFELLSTMDEGCAVRCKIIELLSK------ACG 157 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 C + G+ L + + + E + + KTA LFSAA E +++ G R AL Sbjct: 158 RCGMVAGQ--ALDIEAHSSTSFEGVRRIHELKTARLFSAACEAGAVLGGASTKERAALAE 215 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNE 220 YG LG AFQ DD+ D GE +E Sbjct: 216 YGSALGCAFQAKDDLND-AGEDSE 238 >gi|4490594|emb|CAB38744.1| geranylgeranyl pyrophosphate synthase [Rhodobacter sphaeroides] Length = 288 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 14/208 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--DDSA 89 Y + GG R+RP L L+ A GD+ L A A+E IH A+L+HDD+ DD+ Sbjct: 33 YAVTPGGARIRPTLLLSVATRC---GDSRPALSDAAAVALELIHCASLVHDDLPCFDDAE 89 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-ACTLAEGELRQL 148 +RRGK + ++L GD L+ F ++ + AL LV A + G + Sbjct: 90 IRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLAGAAADRPQRALQLVTALAVRTGMPMGI 149 Query: 149 SLSKNLDVTEEDYLHVI-KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + + + L ++KT LF AA ++ ++ AG + + + G +G AFQ+ Sbjct: 150 CAGQGWESESQINLSAYHRAKTGALFIAATQMGAIAAGYEA---EPWEELGARIGEAFQV 206 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 DD+ D + +GK G+D + +P+ Sbjct: 207 ADDLRDALCDAETLGKPAGQDEIHARPS 234 >gi|319938731|ref|ZP_08013095.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV] gi|319811781|gb|EFW08047.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV] Length = 300 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 14/228 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSAL 90 + + Y + +GGKR+RP+L L L + H +A A+E IHT +L+HDD+ Sbjct: 29 EAILYSVNAGGKRIRPLLLLELLEGLGLELTEAHFQVAAALEMIHTGSLIHDDLPAMDDD 88 Query: 91 --RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-----LSLVACT--LA 141 RRG++ + +G ++L GD L ++ ++ E ++ LSL A T + Sbjct: 89 DYRRGRLTSHKKFGEAMAILAGDSLFLDSYALIAEAALPSQIKVNLIAELSLAAGTFGMV 148 Query: 142 EGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G++ + K++ + E +H +KT L + + LIA V ++ L+ G Sbjct: 149 GGQVLDMQGEGKDISLAELQNIHA--NKTGKLLTYPFIAAGLIAEVAQPQQEKLRKIGQL 206 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 LG+AFQ+ DD+LD E+GK +D K T P IL G KR Sbjct: 207 LGLAFQVRDDILDITANFEELGKTPQKDVAAEKATYPAILGL-NGAKR 253 >gi|313887972|ref|ZP_07821650.1| putative geranyltranstransferase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845927|gb|EFR33310.1| putative geranyltranstransferase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 285 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 114/220 (51%), Gaps = 20/220 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSA- 89 D +KY +FSGGKR+RP+L+L T + +L A AIE IHT +L+HDD+ Sbjct: 31 DSMKYSLFSGGKRIRPLLSLITFCEFSEDSLDKILPFAAAIEMIHTYSLIHDDLPAMDDD 90 Query: 90 -LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV------IETKS--QEALEALSLV-ACT 139 RR K V+ ++L GD LL+ + ++ IE + A+ A+ + T Sbjct: 91 DFRREKPTNHKVYSEGIAILAGDGLLNMSMEILLRHIENIEDPEDLKRAMRAMKYIYNAT 150 Query: 140 LAEGEL--RQLSLSKNL-DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 G + + + +S+++ D TE+D ++ K KT L A++ V +IAG+ L Sbjct: 151 GVNGMIGGQTIDISRDVSDYTEDDCENMYKLKTGALIKASVVVGGIIAGLDPDNITKLAR 210 Query: 197 YGMNLGIAFQLVDDVLDYR-----GEVNEMGKNIGEDFRN 231 +G ++GIA+Q DD+LD GE+N + ED +N Sbjct: 211 FGESIGIAYQFEDDLLDEEKDPDSGEINMLLFKDKEDLQN 250 >gi|72536080|gb|AAZ73145.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium DC413] Length = 302 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 125/226 (55%), Gaps = 20/226 (8%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDDSALRRGKVAA 97 GKR+RP+L + A L YR + LL ACA+E +H A+L+ DD+ +DD+ LRRG+ Sbjct: 52 GKRIRPVLLMLAAHDLGYRDELSGLLDFACAVEMVHAASLILDDIPCMDDAELRRGRPTI 111 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALE-ALSLVACTLAEGELRQLS 149 +G ++L LLS+AF ++ + K+Q E + S+ L +G+ L Sbjct: 112 HRQFGEPVAILAAVALLSRAFGVIALADGISSQAKTQAVAELSHSVGIQGLVQGQF--LD 169 Query: 150 LSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 L++ D + + KT+ LFSAA++++++IAG + R+ L + +LG AFQL+ Sbjct: 170 LTEGGQPRSADAIQLTNHFKTSALFSAAMQMAAIIAGAPLASREKLHRFARDLGQAFQLL 229 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 DD+ D + ++ GK+ +D GK TL +L + KR ++ + Sbjct: 230 DDLTDGQ---SDTGKDAHQDV--GKSTLVNMLGSKAVEKRLRDHLR 270 >gi|301310937|ref|ZP_07216866.1| putative polyprenyl synthetase [Bacteroides sp. 20_3] gi|300831000|gb|EFK61641.1| putative polyprenyl synthetase [Bacteroides sp. 20_3] Length = 518 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 35/291 (12%) Query: 42 GKRLRPMLTLATALMLEYRG---DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GKR RP L AT L L D+ A A+E H A+L+HDD+ D+ R GK Sbjct: 250 GKRWRPYLLAATYLALTGGAEVPDDVQRAAIAVECFHKASLVHDDIQDNDKERYGKPTIN 309 Query: 99 LVWGNQTSVLVGDFLLSQAFCM--VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 ++G ++ VGD LL + + + + + ++ A+ A + +A +G + S+S + Sbjct: 310 ALYGVPIAINVGDILLGEGYRLLSLCDARALTAVAADAHIALCKGQGMELEWSVSPR-PL 368 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T + L + +KT F +L + + AG +R+ Y LGIA+QL+DD+ Sbjct: 369 TLDWVLEIFCNKTVPAFEVSLVLGLICAGDDEVLRRIFHQYSRALGIAYQLLDDI----- 423 Query: 217 EVNEMGKNIGEDFRNGKPTL---PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 EDF++ +P +LA E F +S + ENL KAF+ Sbjct: 424 ----------EDFKDDRPVALRPSAVLAVLCEQNPEPVFTRSLLE-----CENL-KAFLG 467 Query: 274 MRENRALVDTEYR-----AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 EN+ L+ T A +Y Q A +L + + K+ L V + L+ Sbjct: 468 RSENKPLLRTTLERVGQMADTYHQAALTALHEIKNVELKRLLFRVTERILK 518 >gi|328472529|gb|EGF43392.1| geranyltranstransferase [Vibrio parahaemolyticus 10329] Length = 294 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 14/239 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSAL 90 +KY + GGKR+RP L T ML + ++ A AIE IH +L+H +DD L Sbjct: 33 AMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDL 92 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----------ALSLVACTL 140 RRG+ + + T++L GD L + AF ++ + + E A S A + Sbjct: 93 RRGQPTCHIKFDEATAILTGDALQTLAFTIIADGTLSPSAENQRVNMIKALAHSSGANGM 152 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGM 199 G+ L ++N V+ + + + KT L A+++ +L AG + V L+ Y Sbjct: 153 CVGQALDLG-AENRQVSLAEMEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSK 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 +G+AFQ+ DD+LD + +GK G D K T P +L + ++ + + Sbjct: 212 AIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLLGLEGAIEKAHTLLQEALQ 270 >gi|3128225|gb|AAC26705.1| putative trans-prenyltransferase [Arabidopsis thaliana] Length = 297 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 24/177 (13%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A E IH A+LLHDDV+DD+ RRG + +V GN+ L Sbjct: 65 IAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKVVAL------------------ 106 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ L GE +++ S + + Y+ KTA L S + + +++ G Sbjct: 107 ------LATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQ 160 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 V YG NLG+AFQL+DD+LD+ G +GK D R+G T P++ A + Sbjct: 161 TAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAME 217 >gi|323342013|ref|ZP_08082246.1| geranyltranstransferase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464438|gb|EFY09631.1| geranyltranstransferase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 279 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 79/253 (31%), Positives = 130/253 (51%), Gaps = 24/253 (9%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDVV 85 ++ + + Y + SGGKRLRP L LA MLE G ++ L ACA+E +HT +L+HDD+ Sbjct: 21 VVREAMTYSLMSGGKRLRPRLLLA---MLEDFGCDYKLGLNPACALEMVHTYSLVHDDLP 77 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--TLA 141 LRR K V+G ++L GD LL+ AF + SQ +L++ + C LA Sbjct: 78 AMDDDDLRRFKPTNHKVFGEGVAILAGDALLTGAFTAL----SQSSLDSDVVGKCLEILA 133 Query: 142 EGE------LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L Q + +D + KT LF+ A E++ +IAG ++S ++ Sbjct: 134 RNAGNNGMILGQELDIDDHIDHIDDLVACYNLKTGCLFAGAFEMAVVIAG-KDSYQKLAH 192 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 G+ LG+AFQ DD+L+ ++GK+ D K T+ +L ++ ++++ S Sbjct: 193 DLGLTLGVAFQFQDDLLEVTKTSEQIGKSNQSDADRDKTTVVSLLGVEQAHTLTESYF-S 251 Query: 256 TIND--GKISVEN 266 I D ++++EN Sbjct: 252 NIKDLLKQMNIEN 264 >gi|298717274|ref|YP_003729916.1| geranyltranstransferase [Pantoea vagans C9-1] gi|298361463|gb|ADI78244.1| geranyltranstransferase [Pantoea vagans C9-1] Length = 303 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 124/244 (50%), Gaps = 22/244 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHD 82 S+ +++ ++ + GKR+RP+L L A L LL ACA+E +H A+L+ D Sbjct: 36 SERDLVGAAMREGALAPGKRIRPLLLLLAARDLGCSATPAGLLDLACAVEMVHAASLILD 95 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----------QEAL 130 D+ +DD+ LRRG+ +G ++L LLS+AF +V + E Sbjct: 96 DMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSKAFGVVAMAEGLTAAARADAVAELS 155 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A+ + L +G+ + LS + + + L KT+ LF A+++++S++A Sbjct: 156 HAVGMQG--LVQGQFKDLS-EGDKPRSADAILMTNHYKTSTLFCASMQMASIVAETPKEA 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+ L + +NLG AFQL+DD+ D + + GK+ +D +GK TL +L Q R + Sbjct: 213 REQLHRFSLNLGQAFQLLDDLTD---GMADTGKDAHQD--DGKSTLVNLLGPQAVETRLR 267 Query: 251 NFWK 254 + + Sbjct: 268 DHLR 271 >gi|197104377|ref|YP_002129754.1| geranyltranstransferase [Phenylobacterium zucineum HLK1] gi|196477797|gb|ACG77325.1| geranyltranstransferase [Phenylobacterium zucineum HLK1] Length = 292 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 14/230 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDD 87 + + ++Y GKRLR L T M + D+ +L ACA+E IH +L+HDD+ Sbjct: 32 LTEAMRYAALGPGKRLRTFFALETGRMFDL--DDRPVLRSACALECIHAYSLVHDDLPCM 89 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVACTLAEG 143 +RRG+ + T+VL GD L + AF ++ +T + A LVA Sbjct: 90 DDDDVRRGRPTVHKAYDEATAVLAGDALQTAAFEILAHPDTHPDGGIRA-ELVARLAHAS 148 Query: 144 ELRQLSLSKNLDV--TEEDYLHVIKS---KTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 R ++ + +D+ ED V + KT L + A E+ ++A + R AL ++ Sbjct: 149 GARGMAGGQMIDILGVREDLGGVARMQRLKTGALIACAFELPLVLARAMDGERHALMNFA 208 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +LG+A+Q+VDD+LD G+ MGK +D GK +L +R Sbjct: 209 HDLGLAYQIVDDLLDAEGDEAAMGKAARKDVEKGKANFVTLLGVDAARER 258 >gi|312132590|ref|YP_003999929.1| ispa [Bifidobacterium longum subsp. longum BBMN68] gi|311773533|gb|ADQ03021.1| IspA [Bifidobacterium longum subsp. longum BBMN68] Length = 360 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 103/223 (46%), Gaps = 29/223 (13%) Query: 41 GGKRLRPMLTLATALML-----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGKRLR +L L +L R D + LACAIE TA L+HDD++D+S LRRGK Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 111 Query: 96 AARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAE- 142 +A G +++GD L + C+ I +S L +AL+ T+ Sbjct: 112 SAHHALEQAVHSGAIGRGLGLMLGDILATA--CIEITRRSASRLPNTDALNEAFLTMQRE 169 Query: 143 ---GELRQLSLS----KNLDVTEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQA 193 G++ L++ N + L+V + KTA + L + R Sbjct: 170 VEIGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHC 229 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG+AFQL DD+LD G GK +G D R GK T+ Sbjct: 230 ALAVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTV 272 >gi|23465984|ref|NP_696587.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium longum NCC2705] gi|23326700|gb|AAN25223.1| probably bifunctional short chain isoprenyl diphosphate synthase [includes: farnesyl pyrophosphate synthetase (Fpp synthetase) (dimethylallyltransferase); geranyltranstransferase ] [Bifidobacterium longum NCC2705] Length = 372 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 103/223 (46%), Gaps = 29/223 (13%) Query: 41 GGKRLRPMLTLATALML-----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGKRLR +L L +L R D + LACAIE TA L+HDD++D+S LRRGK Sbjct: 64 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 123 Query: 96 AARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAE- 142 +A G +++GD L + C+ I +S L +AL+ T+ Sbjct: 124 SAHHALEQAVHSGAIGRGLGLMLGDILATA--CIEITRRSASRLPNTDALNEAFLTMQRE 181 Query: 143 ---GELRQLSLS----KNLDVTEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQA 193 G++ L++ N + L+V + KTA + L + R Sbjct: 182 VEIGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHC 241 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG+AFQL DD+LD G GK +G D R GK T+ Sbjct: 242 ALAVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTV 284 >gi|307943552|ref|ZP_07658896.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp. TrichSKD4] gi|307773182|gb|EFO32399.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp. TrichSKD4] Length = 310 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 11/227 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSAL 90 +++ +GGKR+RP+L L T + + + +ACA+EFIH +L+H +DD L Sbjct: 51 AMRHGALNGGKRIRPVLLLETVRLFDQDDTQALDIACALEFIHCYSLVHDDLPAMDDDDL 110 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLV------ACTLAEG 143 RRG+ + + T++L GD LL+ AF +V Q+A L LV A Sbjct: 111 RRGQPTVHIAYDEATAILAGDALLTLAFDVVANPGLHQDARIQLRLVRELAQAAGLGGMA 170 Query: 144 ELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + L L S++ D +E + + KT L ++ + + + + +G +G Sbjct: 171 GGQMLDLESEHRDRSEAEIRKLQSMKTGALLRFGCRGGAIFSNAREEDVERVTHFGEIIG 230 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +AFQL DD+LD ++GK G+D GK TL +L ++ TK E Sbjct: 231 LAFQLADDLLDVEASPEQLGKASGKDADAGKATLVGVLGIEQ-TKAE 276 >gi|16519830|ref|NP_443950.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii NGR234] gi|2497460|sp|P55539|ISPA_RHISN RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|2182498|gb|AAB91752.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii NGR234] Length = 332 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 24/229 (10%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV--VDDS 88 ++Y GGKR R +L LA + + H+L + AIE +H TL+HDD+ +DD Sbjct: 65 AMRYATLHGGKRTRALLCLAAGALADT--PAHILDDVGAAIEMMHACTLVHDDLPAMDDD 122 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---------QEALEALSLVACT 139 LRRG + +G T++LVGD L + AF + + +E +A+S A Sbjct: 123 VLRRGLPTVHVKFGEATAILVGDALQAHAFLTLASLDAPGDNRIALVRELAQAVS--AEG 180 Query: 140 LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ----AL 194 A G+ LSL K++++ +H + K L A++ + +L A +++ AL Sbjct: 181 AAGGQAMDLSLVGKHVELDRIVAMH--RMKCGALVRASVRMGALCAIAEDAADATLYCAL 238 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 Y G+A Q+VDD+LD + +GK G+D KPT I+ Q Sbjct: 239 DHYSACFGLALQVVDDILDATADTATLGKTPGKDAAAQKPTCASIMGLQ 287 >gi|262282720|ref|ZP_06060488.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA] gi|262262011|gb|EEY80709.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA] Length = 291 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 78/261 (29%), Positives = 116/261 (44%), Gaps = 38/261 (14%) Query: 36 YLIFSGGKRLRPMLTL----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL- 90 Y + +GGKR+RP+L L A L L+ H +A A+E IHT +L+HDD+ Sbjct: 33 YSVQAGGKRIRPLLLLELVEAFGLPLQ---SAHFQVASALEMIHTGSLIHDDLPAMDDDD 89 Query: 91 -RRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQ---EALEALSLVACTLA--- 141 RRG++ +G ++L GD FL V E SQ + LS A T Sbjct: 90 YRRGRLTNHKKFGEAMAILAGDSLFLDPYGLIAVAELPSQVKVNLIMELSQAAGTFGMVG 149 Query: 142 ------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 EGE QL D+ E +H KT L + + L+ V+ V+ L+ Sbjct: 150 GQALDMEGEGCQL------DLKELQAIHA--HKTGKLLAFPFVAAGLLVQVEEGVQAKLR 201 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK-------R 248 G +G+AFQ+ DD+LD E+GK +D K T P +L ++ + + Sbjct: 202 KIGELIGLAFQVRDDILDVTASFEELGKTPQKDLVAAKSTYPALLGLEKAKETLDQVLDQ 261 Query: 249 EKNFWKSTINDGKISVENLKK 269 +N K + S E+L K Sbjct: 262 AQNLLKEIAQNRPFSGESLTK 282 >gi|283777976|ref|YP_003368731.1| hypothetical protein Psta_0175 [Pirellula staleyi DSM 6068] gi|283436429|gb|ADB14871.1| protein of unknown function DUF116 [Pirellula staleyi DSM 6068] Length = 673 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 30/231 (12%) Query: 41 GGKRLRPMLTLAT---------ALMLEYRGDNHVLL---------ACAIEFIHTATLLHD 82 GGK RP +T+A L G V L A +IE H A+L+HD Sbjct: 339 GGKYSRPFITMAVHDALTGGHGTLPKMPAGGGEVQLDIPDTVKRAALSIETFHKASLVHD 398 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-------SQEALEALSL 135 D+ DD A R G+ +G T++ VGD+L+ + +V + + + L+ L+ Sbjct: 399 DIEDDDAFRYGEETVHRRFGTPTAINVGDYLIGMGYRLVSKQSRAMGPDTAADILDILAD 458 Query: 136 VACTLAEGELRQLSLSKNLD--VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 L+EG+ +L D ++ D L + KT+ F AAL + +AG + Sbjct: 459 AHIRLSEGQGAELLWRDARDKRLSPLDALKIYALKTSPAFEAALLSGARLAGDVTQYLEP 518 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEV-NEMGKNIGEDFRNGKPTLPVILAFQ 243 L+ + NLG+AFQ+++D+ D++G+ N+M + G D G+PT+ LA + Sbjct: 519 LRQFARNLGVAFQILNDLGDWQGDSHNKM--SAGGDTLAGRPTVLWALALE 567 >gi|194290326|ref|YP_002006233.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Cupriavidus taiwanensis LMG 19424] gi|193224161|emb|CAQ70170.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Cupriavidus taiwanensis LMG 19424] Length = 294 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 111/233 (47%), Gaps = 21/233 (9%) Query: 20 LKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L+ D +P + ++Y SGGKR+RP+L A + ACA+E IH Sbjct: 19 LQAALPDAGTVPHTLHEAMRYAALSGGKRVRPLLVHAAGEVSGAAPAACDAAACAVEMIH 78 Query: 76 TATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +L+HDD+ LRRG+ + T++LVGD L +QAF ++ + L Sbjct: 79 AYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQTQAFIVLAGAEPIAPAVRL 138 Query: 134 SLVA--------CTLAEGE---LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 LVA +A G+ L+ + + D E +H + KT L A++ + +L Sbjct: 139 QLVAELARASGSAGMAGGQAIDLQNVGRAMTRDALEA--MH--RMKTGALLRASVRMGAL 194 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + AL Y +G+AFQ+VDD+LD + +GK G+D + KPT Sbjct: 195 CGEIDAAGLAALDRYAAAVGLAFQVVDDILDVTADTATLGKTAGKDAAHDKPT 247 >gi|288818510|ref|YP_003432858.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus TK-6] gi|288787910|dbj|BAI69657.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus TK-6] gi|308752100|gb|ADO45583.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6] Length = 264 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 7/191 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D + Y +F GKR+RP+ A + L + + + CAIEFIH +L+HDD+ +D+ Sbjct: 27 DAMSYYVFQEGKRIRPLFLCAVSNALGGNLQDAITVGCAIEFIHNYSLVHDDLPALDNDD 86 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE---LR 146 RRGK + +++G ++L GD LL+ AF + ++ +L L+ E + Sbjct: 87 FRRGKPSCHVLFGEDMAILAGDALLNLAFETLSNRENFISLSEKDLIYIIRLVSESSGFQ 146 Query: 147 QLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + + +DV + D + KTA +FSA +I+ V + L G +G+ F Sbjct: 147 GMVGGQVMDVKKLGDPWSISLKKTASMFSAVFACGGIISKKYERV-EYLSKAGTQVGLLF 205 Query: 206 QLVDDVLDYRG 216 QL+DD D G Sbjct: 206 QLIDDYKDKDG 216 >gi|15967020|ref|NP_387373.1| geranyltranstransferase protein [Sinorhizobium meliloti 1021] gi|307302488|ref|ZP_07582245.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C] gi|307316182|ref|ZP_07595626.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83] gi|15076293|emb|CAC47846.1| Probable geranyltranstransferase [Sinorhizobium meliloti 1021] gi|306898022|gb|EFN28764.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83] gi|306903158|gb|EFN33748.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C] Length = 304 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 10/214 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L + +L + + A+E IH +L+HDD+ + Sbjct: 45 AMRHGVLNGGKRLRPFLVAESTALLGGDAEAALRTGAALECIHCYSLVHDDLPAMDDDDM 104 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-------LEALSLVACTLAEG 143 RRGK + + T++L GD LL+ AF +V ++ + + AL+ A Sbjct: 105 RRGKPTVHVAFDEATAILAGDSLLTFAFDIVAAPETALSDRQKTTLVLALARAAGHGGMA 164 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + L L+ +E + +++S KT L A E ++IA R+ L+++G +G Sbjct: 165 GGQALDLAAEKSAPDEAGIVLLQSMKTGALIRFACEAGAIIADAPAEDRRRLRAFGDKIG 224 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +AFQL DD+LD + +GK G+D GK TL Sbjct: 225 LAFQLADDLLDLTADAAIVGKATGKDAARGKGTL 258 >gi|153810474|ref|ZP_01963142.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174] gi|149833653|gb|EDM88734.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174] Length = 263 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 15/217 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDV--VDDS 88 + Y + +GGKRLRP+L L T + + GD + IE IHT +L+HDD+ +D+ Sbjct: 39 AMNYSMCAGGKRLRPILLLETLRL--FGGDEKLAEPFMAGIEMIHTHSLIHDDLPAIDND 96 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVA-CTLAE 142 RRG++ V+G VL G LL+ A+ + + A+ ++A T Sbjct: 97 DYRRGRLTTHKVYGEAMGVLSGVTLLNYAYETMFRAFELTDDKDRVIRAVRIMAEKTGIY 156 Query: 143 GEL--RQLSLSKNLDVTEEDYL-HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G L + + + + E+D L ++ + KT+ L A++ +++AG ++ Sbjct: 157 GMLGGQSVDVENDGKPLEKDLLDYIYEHKTSALIEASMMAGAVLAGADEEQTSMIEQAAS 216 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++G+AFQ+ DD+LD E+GK + D +N + L Sbjct: 217 DIGLAFQIQDDILDVTSTSQELGKPVHSDEKNKQSYL 253 >gi|307129906|ref|YP_003881922.1| geranyltranstransferase [Dickeya dadantii 3937] gi|306527435|gb|ADM97365.1| geranyltranstransferase [Dickeya dadantii 3937] Length = 303 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 12/230 (5%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGKRLRP L T + +N A A+E IH +L+HDD+ LRRG+ Sbjct: 44 GGKRLRPFLVYTTGQLFGISQNNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCH 103 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQLSLSKNLDV 156 + +G ++L GD L + AF ++ + E + L++++ + + + + LD+ Sbjct: 104 VRFGEDKAILAGDALQTLAFSILADAPMPEVSDRDRLAMISELASASGVAGMCGGQALDL 163 Query: 157 TEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLV 208 E + + + KT L A++ + +L AG + + L Y +G+AFQ+ Sbjct: 164 EAEGHQVDLLALERIHRHKTGALIRASVRLGALAAGERGRLALPCLDRYANAVGLAFQVQ 223 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 DD+LD G+ GK G D + GK T P +L ++ + + + +++ Sbjct: 224 DDILDVIGDSATTGKRQGADQQLGKSTYPALLGLEQAKIKARELCQESLS 273 >gi|171778673|ref|ZP_02919769.1| hypothetical protein STRINF_00621 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282630|gb|EDT48054.1| hypothetical protein STRINF_00621 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 289 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 118/242 (48%), Gaps = 44/242 (18%) Query: 31 PDVVKYLIFS---GGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDD 83 PD+++ +++S GGKR+RP++ L +LE G D H +A A+E IHT +L+HDD Sbjct: 23 PDLIESILYSVDAGGKRIRPLIFLE---LLEGFGISLTDAHYDVAAALEMIHTGSLIHDD 79 Query: 84 VVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA--------- 132 + RRG++ + T++L GD L F ++ + AL A Sbjct: 80 LPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFDLL----ANAALTADIKIRLIAE 135 Query: 133 LSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSL 182 LS + T +GE R+LSLS+ L +I S KT L + + + + Sbjct: 136 LSHASGTYGMVGGQMLDMKGEERKLSLSE---------LQLIHSNKTGKLLTFPVVAAGI 186 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AGV++ L+ G +G+AFQ+ DD+LD E+GK +D K T P +L Sbjct: 187 VAGVEDEELANLRKTGSLIGLAFQVRDDILDVTASFEEIGKTPKKDLLADKATYPSLLGL 246 Query: 243 QR 244 + Sbjct: 247 DK 248 >gi|294817076|ref|ZP_06775718.1| Polyprenyl synthase [Streptomyces clavuligerus ATCC 27064] gi|326446035|ref|ZP_08220769.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|294321891|gb|EFG04026.1| Polyprenyl synthase [Streptomyces clavuligerus ATCC 27064] Length = 385 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 80/297 (26%), Positives = 124/297 (41%), Gaps = 45/297 (15%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V++LI GG+R RP L T +L + L A+E HT +L+ DDV D SA+RRG Sbjct: 58 VRHLIDHGGRRWRPALVAHTIELLGGAPERFGPLVAALELAHTGSLVVDDVEDGSAVRRG 117 Query: 94 KVAARLVWGNQTSVLVGD---FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-LS 149 + A +G ++ G F +A + + S A E +L L + Q L Sbjct: 118 RPTAHAAFGTAVALNAGTAAYFAFDRAIDLTLPDDSDLAGELRALFLAALRAAHMGQALD 177 Query: 150 LSKNLDVTEE--------DYLHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L + E LH + + K+ L +A +++L+ ++ AL + Sbjct: 178 LQGHHPELEHALTSGESAPVLHSVRLTHRLKSGTLVAAGFTMAALVTCAPPALVGALTDF 237 Query: 198 GMNLGIAFQLVDDVLDYRGEVNE--MGKNIGEDFRNGKPTLPVILAFQR----------- 244 GM LG A+Q+ DD D G ++ K + ED R K TLP+ A R Sbjct: 238 GMALGTAYQITDDTADLEGVTHDGRPTKTVAEDLRGAKVTLPLAHATARVPADRLMALWG 297 Query: 245 ----GTKREKNFWKSTINDGKI-----SVENLKKAF-------IIMRENRALVDTEY 285 G + + DG+ +VE L++A + E R LVD + Sbjct: 298 RVRDGARADDGRAAGNGGDGRAATDGRAVEELRRALLSCGAAAVCEEEARLLVDGAW 354 >gi|93278760|pdb|2AZK|A Chain A, Crystal Structure For The Mutant W136e Of Sulfolobus Solfataricus Hexaprenyl Pyrophosphate Synthase gi|93278761|pdb|2AZK|B Chain B, Crystal Structure For The Mutant W136e Of Sulfolobus Solfataricus Hexaprenyl Pyrophosphate Synthase Length = 289 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 13/206 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D+ Y I GKR R L + + L + A AIE +H+A+L DD+VD A R Sbjct: 40 DISSY-ILKDGKRFRGTLNMFFTVALGGDIKDSYGGALAIEILHSASLALDDIVDLDATR 98 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG AA +V+GN+ + + ++L+ A ++ + +AL + + G LR + Sbjct: 99 RGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGDDALNTSIELEKDTSVGALRDM--- 155 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 DY+ I+ KT LF + +S+ + N+ +Q L G LGI +Q++DD Sbjct: 156 ----YDNSDYIRTIELKTGSLFKLSTVLSAYASKHYNTKQQML-DVGKYLGIIYQVIDDF 210 Query: 212 LDYRG----EVNEMGKNIGEDFRNGK 233 +DY+ E++ K + + +R GK Sbjct: 211 VDYKTKKVEEIDGSAKQLFKYYREGK 236 >gi|24379060|ref|NP_721015.1| putative farnesyl diphosphate synthase [Streptococcus mutans UA159] gi|24376957|gb|AAN58321.1|AE014902_9 putative farnesyl diphosphate synthase [Streptococcus mutans UA159] Length = 289 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 17/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDV--V 85 + V Y + +GGKR+RP+L L +L+ G + H +A ++E IHT +L+HDD+ + Sbjct: 27 EAVLYSVDAGGKRIRPLLLLE---ILQGFGLVLTEAHYQVAASLEMIHTGSLVHDDLPAM 83 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D+ RRG++ +G T++L GD L F ++ + + ++ + + A G Sbjct: 84 DNDDYRRGQLTNHKKFGEATAILAGDSLFLDPFGLLAKADLRADIKIKLVAELSDAAGSY 143 Query: 146 RQLSLSKNLDVTEE------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + LD+ E D L I + KT L + + +IA + L+ G Sbjct: 144 GMVG-GQMLDIKGEHVQLNLDQLAQIHANKTGKLLTFPFVAAGIIAELSEKALARLRQVG 202 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+AFQ+ DD+LD +E+GK +D K T P +L + Sbjct: 203 ELVGLAFQVRDDILDVTASFSELGKTPQKDIEADKSTYPSLLGLDK 248 >gi|146338683|ref|YP_001203731.1| geranylgeranyl pyrophosphate synthetase [Bradyrhizobium sp. ORS278] gi|41018904|gb|AAR98495.1| geranyl geranyl synthase [Bradyrhizobium sp. ORS278] gi|146191489|emb|CAL75494.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (Farnesyltranstransferase) [Bradyrhizobium sp. ORS278] Length = 289 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 20/261 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--D 86 ++ +F G R+RP L A A GD+ AIE +H A+L+HDD+ D Sbjct: 30 AMQAAVFPKGARVRPRLCHAVAAAC---GDDEPAATDAAGSAIELLHCASLVHDDLPCFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 ++ LRRG+ + +G +VL GD L+ AF + +++ A + A G Sbjct: 87 NAKLRRGRPSVHAAFGEPLAVLAGDALIVLAFQTLAKSRCSPLRLARLIETIGDAVGVPH 146 Query: 147 QLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 ++ + + E D H +SKT LF+AA + AG + +A +S G +G A+ Sbjct: 147 GIAAGQAWECEPEIDLSHYHRSKTGALFAAATISGAAAAGHADP--EAWRSLGEKIGEAY 204 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 Q+ DD+ D + E GK +G+D G+P +L + G ++ + DG ++ Sbjct: 205 QVADDIRDAASDEEEAGKPVGQDAALGRPN--AVLRY--GLAGAVSYLHDLVADGIRTMP 260 Query: 266 NLKKAFIIMRENRALVDTEYR 286 A E RAL++ E + Sbjct: 261 PCAHAH----ELRALMEQEAK 277 >gi|251790664|ref|YP_003005385.1| geranyltranstransferase [Dickeya zeae Ech1591] gi|247539285|gb|ACT07906.1| Polyprenyl synthetase [Dickeya zeae Ech1591] Length = 303 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 20/234 (8%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGKRLRP L +T + D+ A A+E IH +L+HDD+ LRRG+ Sbjct: 44 GGKRLRPFLVYSTGRLFAIAQDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCH 103 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLVA--------CTLAEGEL 145 + +G ++L GD L + AF ++ + ++ L +S +A C +L Sbjct: 104 VRFGEDKAILAGDALQTLAFSILADAPMPGVSDRDRLAMISELARASGVAGMCGGQALDL 163 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSYGMNLGIA 204 L +L E + H KT L A++ + +L AG + + L Y +G+A Sbjct: 164 EAEGLQVDLQTLERIHRH----KTGALIRASVRLGALAAGERGRLALPCLDRYADAIGLA 219 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 FQ+ DD+LD G+ GK G D + GK T P +L ++ ++ + + +++ Sbjct: 220 FQVQDDILDVIGDSATTGKRQGADQQLGKSTYPALLGLEQAQRKARELCQESLS 273 >gi|15899101|ref|NP_343706.1| geranylgeranyl pyrophosphate synthetase, putative (gdS-2) [Sulfolobus solfataricus P2] gi|284173784|ref|ZP_06387753.1| geranylgeranyl pyrophosphate synthetase, putative (gdS-2) [Sulfolobus solfataricus 98/2] gi|13815644|gb|AAK42496.1| Geranylgeranyl pyrophosphate synthetase, putative (gdS-2) [Sulfolobus solfataricus P2] gi|261600850|gb|ACX90453.1| Polyprenyl synthetase [Sulfolobus solfataricus 98/2] Length = 281 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 13/206 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D+ Y I GKR R L + + L + A AIE +H+A+L DD+VD A R Sbjct: 32 DISSY-ILKDGKRFRGTLNMFFTVALGGDIKDSYGGALAIEILHSASLALDDIVDLDATR 90 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG AA +V+GN+ + + ++L+ A ++ + +AL + + G LR + Sbjct: 91 RGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGDDALNTSIELWKDTSVGALRDM--- 147 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 DY+ I+ KT LF + +S+ + N+ +Q L G LGI +Q++DD Sbjct: 148 ----YDNSDYIRTIELKTGSLFKLSTVLSAYASKHYNTKQQML-DVGKYLGIIYQVIDDF 202 Query: 212 LDYRG----EVNEMGKNIGEDFRNGK 233 +DY+ E++ K + + +R GK Sbjct: 203 VDYKTKKVEEIDGSAKQLFKYYREGK 228 >gi|304384740|ref|ZP_07367086.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284] gi|304328934|gb|EFL96154.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284] Length = 297 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 20/214 (9%) Query: 31 PDVVKYLIFS---GGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV-- 84 P + + + +S GGKR+RP++ LA +L + VL +A A+E +HT +L+HDD+ Sbjct: 35 PQLARMMAYSFNAGGKRVRPLILLAILEVLGEPINPDVLTVAVALEAVHTYSLIHDDLPA 94 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D+ LRRG+ + +G ++L GD LL+ AF + T ++A V LA+ Sbjct: 95 MDNDDLRRGRPTSHKQFGEAEAILTGDALLTIAFQWLAATGFTAEVKAT--VIGDLAQAA 152 Query: 145 LRQLSLSKNLDVTEEDY----------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + ++ L E ++ LH +K+ ++F A + + IA + +V A+ Sbjct: 153 GPEGMIAGQLQDIEGNHQRYTIEQLKKLHELKTGQMLIFPA--KAALHIAKCETTVATAI 210 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 + N G+AFQ+ DD++D E+GK G+D Sbjct: 211 LRFVQNFGLAFQIHDDIIDVTESSVELGKTAGKD 244 >gi|254283313|ref|ZP_04958281.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium NOR51-B] gi|219679516|gb|EED35865.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium NOR51-B] Length = 292 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 33/257 (12%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDVV--D 86 + + Y +F GG R+RP L +A A G + L ACAIE +H A+L+HDD+ D Sbjct: 30 NALHYAVFPGGARVRPQLCMAVAAA--NTGKDPSLAKSAACAIELLHCASLVHDDLPCFD 87 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVA---- 137 D+ +RRGK + +G + +VL GD L+ AF M + VA Sbjct: 88 DATVRRGKPSVHSAFGERIAVLTGDALIVMAFQVLAKGMATARYPDRGPAVMGYVADGVA 147 Query: 138 --CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 C +A G+ + +L + + SKT LF AA + AGV + + Sbjct: 148 APCGIAAGQAWECEQRVDLALYHQ-------SKTGALFIAATCAGAAAAGVDPT---PWR 197 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + G ++G A+Q+ DD+ D ++ +GK G D +P+ L +R + ++ Sbjct: 198 NLGASIGEAYQVADDIKDATSDIETIGKPTGIDIALDRPSAVRELGVDGAVQRLRQCMEA 257 Query: 256 TIN-----DGKISVENL 267 ++ DG+ ++ L Sbjct: 258 GLDAIPQCDGRAQLQQL 274 >gi|270290381|ref|ZP_06196606.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4] gi|270281162|gb|EFA26995.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4] Length = 294 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 20/214 (9%) Query: 31 PDVVKYLIFS---GGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV-- 84 P + + + +S GGKR+RP++ LA +L + VL +A A+E +HT +L+HDD+ Sbjct: 32 PQLARMMAYSFNAGGKRVRPLILLAILEVLGEPINPDVLTVAVALEAVHTYSLIHDDLPA 91 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D+ LRRG+ + +G ++L GD LL+ AF + T ++A V LA+ Sbjct: 92 MDNDDLRRGRPTSHKQFGEAEAILTGDALLTIAFQWLAATGFTAEVKAT--VIGDLAQAA 149 Query: 145 LRQLSLSKNLDVTEEDY----------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + ++ L E ++ LH +K+ ++F A + + IA + +V A+ Sbjct: 150 GPEGMIAGQLQDIEGNHQRYTIEQLKKLHELKTGQMLIFPA--KAALHIAKCETTVATAI 207 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 + N G+AFQ+ DD++D E+GK G+D Sbjct: 208 LRFVQNFGLAFQIHDDIIDVTESSVELGKTAGKD 241 >gi|32265833|ref|NP_859865.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449] gi|32261882|gb|AAP76931.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449] Length = 288 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 17/204 (8%) Query: 40 SGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 +GGKR RP L L + N L A +IE IHT +L+HDD+ +D++ LRRG Sbjct: 38 NGGKRFRPALVFCVVNALAPQLIKNAFLPALSIECIHTYSLIHDDLPCMDNAPLRRGHAT 97 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLSLSKN 153 + ++LVGD L + AF ++ SQ L+A L L+ + + L + Sbjct: 98 LHTKYDETLALLVGDGLNTYAFALL----SQARLDAQVRLELIHSLALNAGIGGMVLGQM 153 Query: 154 LDVTEEDY------LHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 LD ED L +I + KTA L + +L+ ++I+ + ++ +G+ LGI FQ Sbjct: 154 LDCAFEDKKLSLQELQIIHTNKTAKLIATSLQFGAIISNAKAHFASSIYEFGLKLGIYFQ 213 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFR 230 L DD++D + + GK D Sbjct: 214 LRDDLIDACFDAQQAGKTTHNDIH 237 >gi|291516753|emb|CBK70369.1| Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum subsp. longum F8] Length = 360 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/223 (31%), Positives = 103/223 (46%), Gaps = 29/223 (13%) Query: 41 GGKRLRPMLTLATALML-----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGKRLR +L L +L R D + LACAIE TA L+HDD++D+S LRRG+ Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRP 111 Query: 96 AARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAE- 142 +A G +++GD L + C+ I +S L +AL+ T+ Sbjct: 112 SAHRALEQAVHSGAIGRGLGLMLGDILATA--CIEITCRSASRLPNTDALNEAFLTMQRE 169 Query: 143 ---GELRQLSLS----KNLDVTEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQA 193 G++ L++ N + L+V + KTA + L + R Sbjct: 170 VEIGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHC 229 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG+AFQL DD+LD G GK +G D R GK T+ Sbjct: 230 ALAVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTV 272 >gi|326317942|ref|YP_004235614.1| geranyltranstransferase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374778|gb|ADX47047.1| Geranyltranstransferase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 306 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 13/215 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y + GKRLRP+L LA A + + AC++E IH +L+HDD+ +D+ Sbjct: 46 DAMRYAVLGAGKRLRPLLVLAAAEAVSGHAGAALRAACSVELIHAYSLVHDDMPCMDNDV 105 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRGK + +G ++L GD L QA + T + EA+ C L Sbjct: 106 LRRGKPTVHVQFGQAQALLAGDAL--QALAFELLTPEDDVPEAMQARLCRLLARAAGADG 163 Query: 150 L---------SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + S + ++E++ + + KT L +++ + + + AL YG Sbjct: 164 MAGGQAIDLASVGIALSEDELRRMHRLKTGALLQSSVLMGAACGAAAPAAWDALSRYGAA 223 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 LG+AFQ+VDDVLD + +GK G+D + KPT Sbjct: 224 LGLAFQVVDDVLDVVADSATLGKTAGKDAASDKPT 258 >gi|88704428|ref|ZP_01102142.1| Geranyltranstransferase [Congregibacter litoralis KT71] gi|88701479|gb|EAQ98584.1| Geranyltranstransferase [Congregibacter litoralis KT71] Length = 269 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 17/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-----ACAIEFIHTATLLHDDVVD 86 D Y + GKRLRP L A+A G++ A AIE IHT +L+HDD+ Sbjct: 8 DARSYSLNIPGKRLRPQLLEASA---RATGNDRAEALAGPSAEAIELIHTYSLIHDDLPA 64 Query: 87 DSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---ETKSQEALEALSLVACTLA 141 LRRG+ + + T++LVGD L ++AF ++ E +++ + ++ +A Sbjct: 65 MDDDDLRRGRPTLHVAFDEATAILVGDGLQAKAFELIANDDELSTEQRVRLIARLAKAAG 124 Query: 142 -EGELRQLSL---SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 +G + L + N D++ +D ++ KT L +AAL + ++ ++ L++ Sbjct: 125 FDGMVGGQGLDIEATNKDLSLDDLKNIHALKTGALITAALVMGGIVGNATDAQLATLETV 184 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G +G+AFQ++DDV+D R + + +GK G+D GK T ++ + Sbjct: 185 GEKIGLAFQIIDDVIDVRSDSSTLGKTAGKDAAAGKTTYVALMGVE 230 >gi|294631343|ref|ZP_06709903.1| polyprenyl synthetase [Streptomyces sp. e14] gi|292834676|gb|EFF93025.1| polyprenyl synthetase [Streptomyces sp. e14] Length = 383 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 103/213 (48%), Gaps = 7/213 (3%) Query: 42 GKRLRPMLTLATA--LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GK +RP L LA A + V A A+E +H TLLHDDV+D RR + Sbjct: 97 GKAIRPALVLAAAHAIGGARGRAAAVRAAAAVELVHNFTLLHDDVMDRDTTRRHRPTVWT 156 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GELRQLSLSKN--L 154 V+G+ ++L GD L + A ++ E A A + +A + E G+ +L Sbjct: 157 VFGDADAILAGDALQALALRLLAEDPHPAAPAAAARLAACVVELCAGQHADTALESRAPT 216 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +VT + L + ++KT L A V L AG +AL ++G G+AFQL+DDV+ Sbjct: 217 EVTLAEVLAMAEAKTGALLGCACAVGGLYAGAAEEEVRALDAFGRQAGLAFQLIDDVIGI 276 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 G+ GK G D K +LPV+ A GT Sbjct: 277 WGDPERTGKPAGADLAARKKSLPVVAALTSGTP 309 >gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii] gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii] Length = 261 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 110/224 (49%), Gaps = 14/224 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D ++Y + GG+R P+ +A ++ D+ + ACA+E I + + DD+ +DDS Sbjct: 3 DAMRYAV-GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDSE 61 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVACT-LAEG 143 LR GK +G T++ G LL+ F + +T ++ E + T L G Sbjct: 62 LRHGKPTVHRAFGIPTALFAGTALLALGFEHLAARYSGDTAARMVAEVGRAIGSTGLLAG 121 Query: 144 ELRQLSLS---KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + L + + +++ +++H+ KT+ L A+L ++ G +AL++YG Sbjct: 122 QAVDLGIENPDRGVELETLEFVHL--HKTSALLEASLVAGAIAGGASEQEIEALRAYGRV 179 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G+ +Q+VDDV D + E+GK G+D GK T IL + Sbjct: 180 TGLLYQIVDDVADATKTMEELGKIPGQDAMAGKSTYSTILGVDK 223 >gi|238752774|ref|ZP_04614243.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380] gi|238709032|gb|EEQ01281.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380] Length = 306 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 88/297 (29%), Positives = 134/297 (45%), Gaps = 41/297 (13%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFS---GGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++VN IL I D+VK + + GGKRLRP L AT M N A Sbjct: 19 QRVNQAILDFIAPLPFGNSDLVKAMRYGAVLGGKRLRPYLVYATGQMFGLSLANLDAPAA 78 Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 AIE IH +L+HDD+ LRRG+ + +G ++L GD L + AF ++ E Sbjct: 79 AIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILSEAAMP 138 Query: 128 EALEA--LSLVACTLA----------------EGELRQLSLSKNLDVTEEDYLHVIKSKT 169 + + LS++A LA E E RQ+SL+ D + + KT Sbjct: 139 DVADKDRLSMIA-ELAHASGVAGMCGGQALDLEAEARQISLT--------DLEQIHRHKT 189 Query: 170 AVLFSAALEVSSLIAGVQNSVRQAL-KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 L AA+ + +L AG L Y +G+AFQ+ DD+LD G+ +GK G D Sbjct: 190 GALIRAAVRLGALAAGAAGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIGKRQGSD 249 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWK------STINDGKISVENLK--KAFIIMREN 277 + GK T P +L + + ++ + +++ + L+ FII R+N Sbjct: 250 QQLGKSTYPALLGLDCAKTKALDLYQEAMSALNALSEQSYDIAPLQALACFIIERDN 306 >gi|50955185|ref|YP_062473.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951667|gb|AAT89368.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 371 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 79/233 (33%), Positives = 108/233 (46%), Gaps = 29/233 (12%) Query: 41 GGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK--V 95 GGKRLRP L+ L + R ++ + A A E +HTA LLHDD++D +RRG+ V Sbjct: 65 GGKRLRPRFLLSAFHGLGAPDDRREDAIRTAVAFELLHTAFLLHDDLIDGDTVRRGRPNV 124 Query: 96 AARL---------------VWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSL 135 A VWG ++L GD LL A + + L+AL Sbjct: 125 AGEFSADALFRGADAPLATVWGESAALLAGDLLLHAASDQLARLDAPAGVRSRLLDALDR 184 Query: 136 VACTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQA 193 A GEL + L+ + D L + + KTA S L +L+AG + + Sbjct: 185 AVFVTAAGELADVGLATGMTARGIPDVLAMTEHKTAAYSVSGPLTAGALLAGASDGLLDV 244 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 L YG +G AFQL DD+L G GK+I D R GK T ++AF RGT Sbjct: 245 LAHYGRLVGAAFQLGDDLLGVFGRPAVTGKSIVSDLREGKET--SLIAFARGT 295 >gi|332638330|ref|ZP_08417193.1| farnesyl-diphosphate synthase [Weissella cibaria KACC 11862] Length = 287 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 10/186 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D + Y + +GGKRLRP+LTLA A + + A A+E IHT +L+HDD+ +D+ Sbjct: 33 DAMTYAVMAGGKRLRPLLTLAVAQSYGLGINGLLRAASALELIHTYSLIHDDLPAMDNDD 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-------CMVIETKSQEALE-ALSLVACTLA 141 +RRGK +G ++L GD L A+ + K++ L+ AL+ A + Sbjct: 93 MRRGKPTTHKAFGEDVAILAGDALQPLAYQWLASDPLLTTPQKAELTLQLALASGADGMV 152 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G++ ++ + ++ + + KT L + A ++A + V++ L ++GM Sbjct: 153 AGQVMDMAATNAATISLDQVKAIHYRKTGALIAYAAIAGGIMAHASDEVKETLWNFGMAY 212 Query: 202 GIAFQL 207 G+AFQ+ Sbjct: 213 GLAFQI 218 >gi|325111161|ref|YP_004272229.1| hypothetical protein Plabr_4636 [Planctomyces brasiliensis DSM 5305] gi|324971429|gb|ADY62207.1| protein of unknown function DUF116 [Planctomyces brasiliensis DSM 5305] Length = 623 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 27/236 (11%) Query: 40 SGGKRLRPMLTLATALMLEYRGD--------NHVL--------LACAIEFIHTATLLHDD 83 +GGKR RP +TLA A GD N L A AIE H A+L+HDD Sbjct: 296 NGGKRFRPFITLA-AWDARNGGDATRKDPSSNEPLEVPDAVKKAAIAIEAFHKASLVHDD 354 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-------SQEALEALSLV 136 + DD R G+ G ++ VGD+L+ + ++ E + ++ +SL Sbjct: 355 IQDDDEYRYGEETLHRQHGVGIAINVGDYLIGMGYRLLAECHVADDPMAVSDIVQRMSLA 414 Query: 137 ACTLAEGELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L EG+ ++ + N L++T D + + KT+ F AAL + G + + + Sbjct: 415 HIKLCEGQGAEMEWTANPSLNLTPLDAMQIYALKTSPAFEAALYSGLRLGGDVSEYDEMV 474 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++ +LG+ FQ+++D+ D+RG+ ++ G+D +PTL + +A Q +K Sbjct: 475 STFCRHLGVGFQILNDLKDWRGD-SQNKVVTGQDAIALRPTLLLAMAIQAANDEQK 529 >gi|56695165|ref|YP_165512.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3] gi|56676902|gb|AAV93568.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3] Length = 288 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 82/271 (30%), Positives = 130/271 (47%), Gaps = 35/271 (12%) Query: 32 DVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 D+ + + ++ GGKRLR L L +A + + + A AIE +H +L+HDD+ Sbjct: 28 DITRAMAWTTEGGKRLRGFLVLESARLHDVDEARAIWPATAIEALHAYSLVHDDLPCMDD 87 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVACTLAEGE- 144 LRRG+ A + W T+VL GD L S AF C E + E L+L TLA+ Sbjct: 88 DDLRRGRPTAHVKWDEGTAVLAGDALHSLAFELCTRPEVGTAETRATLAL---TLAQAAG 144 Query: 145 LRQLSLSKNLDVTEE--------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALK 195 R + L + LD+ E D + +++ KT L A +++AG L+ Sbjct: 145 ARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTGALIEWAAAAGAVLAGADPD---PLR 201 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y LG+AFQ+ DD+LD G+ + GK + +D GK T +L R ++ Sbjct: 202 QYARALGLAFQIADDILDVEGDAEKAGKRLQKDAGAGKATFVSLLGLDAAKARARDL--- 258 Query: 256 TINDGKISVEN-------LKKA--FIIMREN 277 ++ G +++ LK+A F+I R+N Sbjct: 259 -VDQGCAALDGYGERAGTLKEAARFVIARDN 288 >gi|296454314|ref|YP_003661457.1| polyprenyl synthetase [Bifidobacterium longum subsp. longum JDM301] gi|296183745|gb|ADH00627.1| Polyprenyl synthetase [Bifidobacterium longum subsp. longum JDM301] Length = 360 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 103/227 (45%), Gaps = 37/227 (16%) Query: 41 GGKRLRPMLTLATALML-----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGKRLR +L L +L R D + LACAIE TA L+HDD++D+S LRRGK Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 111 Query: 96 AARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEALE---ALSLVACTLAEG 143 +A G +++GD L + C+ I +S L AL+ T+ Sbjct: 112 SAHRALEQAVHSGAIGRGLGLMLGDILATA--CIEITRRSASRLPNTNALNEAFLTMQ-- 167 Query: 144 ELRQLSLSKNLDVTEE------------DYLHVIKSKTA--VLFSAALEVSSLIAGVQNS 189 R++ + + LD+ E L+V + KTA + L + Sbjct: 168 --REVEIGQILDLAVEMTPLSDPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQ 225 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 R + G LG+AFQL DD+LD G GK +G D R GK T+ Sbjct: 226 ARHCALAVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTV 272 >gi|46191324|ref|ZP_00206770.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum DJO10A] gi|189439158|ref|YP_001954239.1| geranylgeranyl pyrophosphate synthase [Bifidobacterium longum DJO10A] gi|322689400|ref|YP_004209134.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis 157F] gi|189427593|gb|ACD97741.1| Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum DJO10A] gi|320460736|dbj|BAJ71356.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis 157F] Length = 360 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/223 (31%), Positives = 103/223 (46%), Gaps = 29/223 (13%) Query: 41 GGKRLRPMLTLATALML-----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGKRLR +L L +L R D + LACAIE TA L+HDD++D+S LRRG+ Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRP 111 Query: 96 AARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAE- 142 +A G +++GD L + C+ I +S L +AL+ T+ Sbjct: 112 SAHRALEQAVHSGAIGRGLGLMLGDILATA--CIEITRRSASRLPNTDALNEAFLTMQRE 169 Query: 143 ---GELRQLSLS----KNLDVTEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQA 193 G++ L++ N + L+V + KTA + L + R Sbjct: 170 VEIGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHC 229 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG+AFQL DD+LD G GK +G D R GK T+ Sbjct: 230 ALAVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTV 272 >gi|110677528|ref|YP_680535.1| geranylgeranyl pyrophosphate synthetase [Roseobacter denitrificans OCh 114] gi|109453644|gb|ABG29849.1| geranylgeranyl pyrophosphate synthetase [Roseobacter denitrificans OCh 114] Length = 294 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 16/234 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--D 86 + Y GG R+RP + + AL GD+ L A A+E IH A+L+HDD+ D Sbjct: 31 ALGYATAPGGARIRPTILTSVALAC---GDDQPKLTDAAASALELIHCASLVHDDLPCFD 87 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE--GE 144 D+ RRGK + + +VL GD L+ AF ++ +S A + ++ + L++ G Sbjct: 88 DADTRRGKPSVHKAYSEPLAVLTGDSLIVLAF-EILARQSGLAPDRVAQMILILSQRTGM 146 Query: 145 LRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + + E D ++KT LF AA ++ ++ AG + + G +G Sbjct: 147 PGGICAGQGWESEAEIDLSAYHQAKTGALFIAATQMGAVAAGQEA---EPWFELGARIGE 203 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 AFQ+ DD+ D + + +GK +G+D +G+P +L Q R K+ I Sbjct: 204 AFQVADDLRDALYDADTLGKPVGQDDLHGRPNAVTLLGVQGAISRLKDILGGAI 257 >gi|239621275|ref|ZP_04664306.1| probable bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515736|gb|EEQ55603.1| probable bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 366 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/223 (31%), Positives = 103/223 (46%), Gaps = 29/223 (13%) Query: 41 GGKRLRPMLTLATALML-----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGKRLR +L L +L R D + LACAIE TA L+HDD++D+S LRRG+ Sbjct: 58 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRP 117 Query: 96 AARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAE- 142 +A G +++GD L + C+ I +S L +AL+ T+ Sbjct: 118 SAHRALEQAVHSGAIGRGLGLMLGDILATA--CIEITRRSASRLPNTDALNEAFLTMQRE 175 Query: 143 ---GELRQLSLS----KNLDVTEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQA 193 G++ L++ N + L+V + KTA + L + R Sbjct: 176 VEIGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHC 235 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG+AFQL DD+LD G GK +G D R GK T+ Sbjct: 236 ALAVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTV 278 >gi|157150564|ref|YP_001449997.1| geranyltranstransferase [Streptococcus gordonii str. Challis substr. CH1] gi|157075358|gb|ABV10041.1| geranyltranstransferase [Streptococcus gordonii str. Challis substr. CH1] Length = 291 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 115/259 (44%), Gaps = 34/259 (13%) Query: 36 YLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--R 91 Y + +GGKR+RP+L L A L + H +A A+E IHT +L+HDD+ R Sbjct: 33 YSVQAGGKRIRPLLLLELVEAFDLPLQ-PAHFQVAAALEMIHTGSLIHDDLPAMDDDDYR 91 Query: 92 RGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALE---ALSLVACTLA----- 141 RG++ +G ++L GD FL V E SQ + LS A T Sbjct: 92 RGRLTNHKKFGEAMAILAGDSLFLDPCGLIAVAELPSQAKVNLIMELSQAAGTFGMVGGQ 151 Query: 142 ----EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 EGE QL D+ E +H KT L + + L+A V V+ L+ Sbjct: 152 ALDMEGEGCQL------DLKELKAIHA--HKTGKLLAFPFVAAGLLAQVDEGVQAKLRRI 203 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK-------REK 250 G +G+AFQ+ DD+LD E+GK +D K T P +L ++ + + + Sbjct: 204 GELIGLAFQVRDDILDVTASFEELGKTPQKDLVAAKSTYPALLGLEKAKETLDQVLDQAQ 263 Query: 251 NFWKSTINDGKISVENLKK 269 N K + S E+L K Sbjct: 264 NLLKEIAKNRPFSGESLTK 282 >gi|167391930|ref|XP_001739954.1| geranylgeranyl pyrophosphate synthetase [Entamoeba dispar SAW760] gi|165896168|gb|EDR23665.1| geranylgeranyl pyrophosphate synthetase, putative [Entamoeba dispar SAW760] Length = 349 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 57/312 (18%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH--------VLLACAIEFIHTATLLHDD 83 DV++ + GKRLRP+ +L+L + G + ACA+E +H +TL HDD Sbjct: 34 DVMEKFVMGPGKRLRPL-----SLLLFFIGGGGKIEERKGVIRTACAMELLHDSTLAHDD 88 Query: 84 VVDDSALRRGK--------------------------VAARLVWGNQTSVLVGDFLLSQA 117 ++D+ LRR ++ + + +++VG+ L S A Sbjct: 89 IMDEDELRRNAPTVVKTFYDKYVERNKEDVKTEKFLFISRGTTYASSIAIMVGNILYSMA 148 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLS-LSKNLDVTEEDYLHVIKSKTAVLFSAA 176 + +E+ S A L L L G++ +S LS T EDY + KTA+ F Sbjct: 149 QRLCLESGSNIAEMLLELFD-VLNYGQILDMSCLS-----TVEDYKLNVIMKTAIFFKTT 202 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + +AG + K +G + GIAFQ+ DD+LD +N + +G D + GK T Sbjct: 203 ACIGLTLAGRSEHDIEIGKEWGEHFGIAFQMRDDLLDI-DPLNGKLRKMGSDIKEGKKTA 261 Query: 237 PVILAFQRG--TKREKNFWKSTINDGKISVENLKKAF-----IIMRENRALVDTEYRAYS 289 V A + G +K +K F + + + + +N ++AF I+ + +V E + + Sbjct: 262 VVWTALKEGVLSKEDKEFVEGILKLNEKAFDN-QEAFTKFLNILRGKPSEIVRQEIKEHH 320 Query: 290 YGQKAKDSLRCL 301 QKA D+L+ L Sbjct: 321 --QKAIDALKQL 330 >gi|213691849|ref|YP_002322435.1| Polyprenyl synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523310|gb|ACJ52057.1| Polyprenyl synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457944|dbj|BAJ68565.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 360 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 71/223 (31%), Positives = 103/223 (46%), Gaps = 29/223 (13%) Query: 41 GGKRLRPMLTLATALML-----EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGKRLR +L L +L R D + LACAIE TA L+HDD++D+S LRRG+ Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRP 111 Query: 96 AARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAE- 142 +A G +++GD L + C+ I +S L +AL+ T+ Sbjct: 112 SAHRALEQAVHSGAIGRGLGLMLGDILATA--CIEITRRSASRLPNTDALNEAFLTMQRE 169 Query: 143 ---GELRQLSLS----KNLDVTEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQA 193 G++ L++ N + L+V + KTA + L + R Sbjct: 170 VEIGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHC 229 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG+AFQL DD+LD G GK +G D R GK T+ Sbjct: 230 ALAVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTV 272 >gi|298346921|ref|YP_003719608.1| geranylgeranyl pyrophosphate synthase [Mobiluncus curtisii ATCC 43063] gi|298236982|gb|ADI68114.1| geranylgeranyl pyrophosphate synthase [Mobiluncus curtisii ATCC 43063] Length = 361 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 115/247 (46%), Gaps = 42/247 (17%) Query: 42 GKRLRPM------LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GKR R + ++ A L D + L ++E T+ L+HDD++D++ RRG Sbjct: 50 GKRFRAIAAYMGWISAAGPLRTGEIPDQLLDLGASLELFQTSALVHDDIIDNAIKRRGLP 109 Query: 96 AARLVW-----------GNQTSVLVGDFLLSQA---FCMVIETKSQEALEALSLVACTL- 140 AA++ + G+ ++L GD L + A F I T S E S T+ Sbjct: 110 AAQIAFMTSFPMGGPRFGDSAAILWGDLLYAAANSYFSQAISTLSVENAHRASNFFVTMQ 169 Query: 141 ---AEGELRQLS-----LSKNLDVTEEDYLHVIKSKTA-------VLFSAALEVSSLIAG 185 A G+ LS LS ++ + E + +IK KTA +L AAL G Sbjct: 170 AEVAYGQFLDLSAETRELSPDMPPSREAAMEIIKHKTARYSVVIPLLLGAALR------G 223 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 +S+ + L+ + LG+A+QL DD L G+ GK G+D R+GK T + LA++ Sbjct: 224 ANDSLIEQLEGFATPLGVAYQLRDDDLGIFGDQELTGKPSGDDIRSGKRTAQLALAWEMT 283 Query: 246 TKREKNF 252 R +++ Sbjct: 284 DDRGRDY 290 >gi|224418966|ref|ZP_03656972.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT 98-5491] gi|253827914|ref|ZP_04870799.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491] gi|313142478|ref|ZP_07804671.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT 98-5491] gi|253511320|gb|EES89979.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491] gi|313131509|gb|EFR49126.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT 98-5491] Length = 288 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 11/202 (5%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLL-ACAIEFIHTATLLHDDV--VDDSALRRG 93 ++ SGGKR RP L L+ + + + A A+E +HT +L+HDD+ +D++ LRRG Sbjct: 37 MVLSGGKRFRPKLLLSVVYANKAKFASKAFAPALALEILHTYSLIHDDLPAMDNALLRRG 96 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 + ++LVGD L + +F + ++K + ++ L+ G + + L + Sbjct: 97 VPTLHHKYDECGAILVGDGLNTHSFYCIAKSKLKPKIKN-KLIEILSYNGGIHGMVLGQA 155 Query: 154 LDVTEE------DYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 LD E + L I +KTA L +AAL++ +IA Q L G++LG+ FQ Sbjct: 156 LDCYFEKQTLPLEKLRTIHLNKTAKLIAAALQMGGIIAKCDKKFCQKLYKIGLDLGLFFQ 215 Query: 207 LVDDVLDYRGEVNEMGKNIGED 228 + DD++D E GK D Sbjct: 216 IRDDIIDATQSSQEAGKTTQND 237 >gi|164690689|dbj|BAF98639.1| geranylgeranyl diphosphate synthase [Streptomyces argenteolus] Length = 360 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 41/278 (14%) Query: 23 ICSDVEMIPDV--VKYLIFSGGKRLRPMLTLATALMLEYRG--------DNHVLLACAIE 72 I DV++ P V + + GGKR+R L +RG + A A+E Sbjct: 34 IPPDVDIGPAVRALGDFVLHGGKRIRAALC-----YWGWRGAGGGDEDLTSAYRAAAALE 88 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARL----------------VWGNQTSVLVGDFLLSQ 116 H L+HDD++D +A RRG+ + +G +++L+GD L Sbjct: 89 VCHCFGLIHDDIIDGTATRRGRPSLHCQLASLHEQAGWHGDAAAFGRSSALLMGDLCLFW 148 Query: 117 AFCMVIETKSQEALEALSL--VACTLAE--GELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 A ++ S+E L + L +AE G++ ++ + + D + V KTA Sbjct: 149 ADELLTTACSEERLVEVRLEYSGMRVAEVCGQMLEMIVQASRDFDVSSGMTVAHYKTAKY 208 Query: 173 FSA-ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + L++ +AG +R++ ++G+ LG AFQL DD+L G+ GK I +D R Sbjct: 209 ATERPLQIGGRLAGSSAELRKSYAAFGLPLGEAFQLRDDILGVFGDPAVTGKPITDDLRE 268 Query: 232 GKPTLPVILAFQRGTKREKN-----FWKSTINDGKISV 264 GKPT+ + A+ T +++ + K+ +++ + +V Sbjct: 269 GKPTVLIAHAYTNATPAQRSRMDELYGKADLDEAQAAV 306 >gi|322378507|ref|ZP_08052957.1| geranyltranstransferase [Helicobacter suis HS1] gi|321149068|gb|EFX43518.1| geranyltranstransferase [Helicobacter suis HS1] Length = 296 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 30/218 (13%) Query: 37 LIFSGGKRLRPMLTLA-------TALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 ++ +GGKR RP L LA + LM++ N +A A+E +HT +L+HDD+ +D+ Sbjct: 41 MLLNGGKRFRPKLLLAVLSSFMRSHLMIK----NAFPIALALEVLHTYSLIHDDLPCMDN 96 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 + LRR + +G + LVGD L + AF ++ + AL+ +SL++ G + Sbjct: 97 APLRRYHPTLHVSYGVTVATLVGDGLNTYAFELLSSARLPNALK-VSLISTLAHCGGVFG 155 Query: 148 LSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAG----VQNSVRQAL 194 + L + +D E + LH +K TA L +A+L++ +LIA ++ L Sbjct: 156 MVLGQAIDCYFEHKPLLREQLEILHTLK--TAKLIAASLKMGALIAKKYARTPTNLPTTL 213 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED-FRN 231 ++G+ LG+ FQ+ DD++D E GK+ D F+N Sbjct: 214 FNFGLKLGLFFQVRDDIIDRTKSPEESGKSTQLDTFKN 251 >gi|72161455|ref|YP_289112.1| polyprenyl synthase / dimethylallyltranstransferase [Thermobifida fusca YX] gi|71915187|gb|AAZ55089.1| putative polyprenyl synthase / dimethylallyltranstransferase [Thermobifida fusca YX] Length = 356 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 93/326 (28%), Positives = 142/326 (43%), Gaps = 43/326 (13%) Query: 8 TLKDMEKVNFLILKR-----ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG- 61 L D E F+ +R I ++ E + ++ +I SGGKRLRP +RG Sbjct: 14 PLVDAELAAFVASRRPLLLEIGAEWEPVLAALEAMI-SGGKRLRPAFC-----YWGWRGA 67 Query: 62 -----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA--RLV-------W------ 101 A A+E + L+HDDV+D+S RRG+ A RL W Sbjct: 68 GGGEEPGLYTAAAALELLQACALIHDDVIDNSDTRRGQPAVHRRLAALHRESGWHGDPDE 127 Query: 102 -GNQTSVLVGDFLLSQAFCMVIETKSQEALEALS-------LVACTLAEGELRQLSLSKN 153 G ++L+GD L A+C + S EAL+ L+ + G+ L Sbjct: 128 FGRGAAILLGDLCL--AWCEDMYQSSALPAEALAAGRGPFDLMRTEVVAGQYLDLVEQAR 185 Query: 154 LDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 T E L V++ K+A L + + +AG + A +YG+ LGIAFQL DDVL Sbjct: 186 GADTVEAALRVMRFKSAKYTIEQPLHLGAALAGRYAELAPAYTAYGIPLGIAFQLRDDVL 245 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 G+ E GK G+D R GK T+ V +R + ++ + D ++ E + Sbjct: 246 GVFGDPEETGKPAGDDLREGKRTVLVAETLRRAAADDAEQFRRLLGDPELGAEEIAWMRS 305 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSL 298 ++ ++ AL E R Y A +L Sbjct: 306 VIVDSGALEACEARIADYVADATQAL 331 >gi|332526065|ref|ZP_08402203.1| geranyltranstransferase [Rubrivivax benzoatilyticus JA2] gi|332109908|gb|EGJ10536.1| geranyltranstransferase [Rubrivivax benzoatilyticus JA2] Length = 306 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 10/209 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA----CAIEFIHTATLLHDDVV--D 86 +++ +F GG R+RP L +A A+ GD LA AIE IH A+L+HDD+ D Sbjct: 30 AIRHAVFPGGARIRPQLCIAVAMA---NGDTDPELADAAASAIELIHCASLVHDDLPCFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 D+ RRG+ + +G + +VL GD L+ AF + E ++ V T+A G Sbjct: 87 DAPTRRGQPSVHKAYGERLAVLAGDALIVTAF-QTLGAAGARHPERMARVLQTVARGVGT 145 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 L + E + + + A + ++ A + ++ G LG A+Q Sbjct: 146 PLGIIAGQAWECEPRVALSDYQRAKTGALFAAATAAGAQASGGDGETWRALGDWLGEAYQ 205 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + DDV D + ++GK +G D G+P+ Sbjct: 206 VADDVRDALADPEQLGKPVGRDVALGRPS 234 >gi|304389368|ref|ZP_07371333.1| possible dimethylallyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656626|ref|ZP_07909513.1| polyprenyl synthetase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304327486|gb|EFL94719.1| possible dimethylallyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492581|gb|EFU82185.1| polyprenyl synthetase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 361 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 115/247 (46%), Gaps = 42/247 (17%) Query: 42 GKRLRPM------LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GKR R + ++ A L D + L ++E T+ L+HDD++D++ RRG Sbjct: 50 GKRFRAIAAYMGWISAAGPLRTGEIPDQLLDLGASLELFQTSALVHDDIIDNAIKRRGLP 109 Query: 96 AARLVW-----------GNQTSVLVGDFLLSQA---FCMVIETKSQEALEALSLVACTL- 140 AA++ + G+ ++L GD L + A F I T S E S T+ Sbjct: 110 AAQIAFMTSFPMGGPRFGDSAAILWGDLLYAAANSYFSQAISTLSVENAHRASNFFVTMQ 169 Query: 141 ---AEGELRQLS-----LSKNLDVTEEDYLHVIKSKTA-------VLFSAALEVSSLIAG 185 A G+ LS LS ++ + E + +IK KTA +L AAL G Sbjct: 170 AEVAYGQFLDLSAETRELSPDMPPSREAAMEIIKHKTARYSVVIPLLLGAALR------G 223 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 +S+ + L+ + LG+A+QL DD L G+ GK G+D R+GK T + LA++ Sbjct: 224 ASDSLIEQLEGFATPLGVAYQLRDDDLGIFGDQELTGKPSGDDIRSGKRTAQLALAWEMT 283 Query: 246 TKREKNF 252 R +++ Sbjct: 284 DDRGRDY 290 >gi|291277196|ref|YP_003516968.1| geranyltranstransferase [Helicobacter mustelae 12198] gi|290964390|emb|CBG40240.1| geranyltranstransferase [Helicobacter mustelae 12198] Length = 287 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 13/201 (6%) Query: 40 SGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 +GGKR RP L A + N L A A+E +HT +L+HDD+ +DD++LRRG Sbjct: 38 NGGKRFRPALLFAVVCSQNFSLAKNAFLPALALECLHTYSLIHDDLPCMDDASLRRGYPT 97 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLVACTLAEGELRQLSLSKNLD 155 + T+ LVGD L F + TK+ + L L+ G + + + + +D Sbjct: 98 LHRSYDEVTATLVGDGL--NTFSFYLLTKAHLDPSTRLRLIEMLSHYGGIGGMVIGQAMD 155 Query: 156 VT-EEDYLHVIK------SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 E +L + K +KTA L + +L + +IA + + + L +GM+LGI FQ+ Sbjct: 156 CYFENQHLEIEKLYAIHLNKTAKLIATSLCMGGVIANLPDGELRNLWDFGMDLGIFFQVR 215 Query: 209 DDVLDYRGEVNEMGKNIGEDF 229 DD++D +GK D+ Sbjct: 216 DDIIDRVENAQSVGKTTNNDY 236 >gi|306833003|ref|ZP_07466135.1| geranyltranstransferase [Streptococcus bovis ATCC 700338] gi|304424902|gb|EFM28036.1| geranyltranstransferase [Streptococcus bovis ATCC 700338] Length = 289 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 129/253 (50%), Gaps = 25/253 (9%) Query: 12 MEKVNFL--ILKRICSDVEMI-PDVVKYLIFS---GGKRLRPMLTLATALMLEYRG---- 61 M+K+N + ++R + +++ PD+++ +++S GGKR+RP++ L +LE G Sbjct: 1 MDKLNEINQAIRRYYAQSDVVSPDLIEAILYSVEAGGKRIRPLIFLE---ILEGFGIELT 57 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 + H +A A+E IHT +L+HDD+ RRG++ + + T++L GD L F Sbjct: 58 EGHFDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFDEATAILAGDSLFLDPFG 117 Query: 120 MVIETKSQEALEALSLVACTLAEGE--------LRQLSLSKNLDVTEEDYLHVIKSKTAV 171 +V +T ++ + + A G L + L+++E +H +KT Sbjct: 118 LVADTALSADIKVRLIAELSQASGTYGMVGGQMLDMKGEERKLNLSELQLIHT--NKTGK 175 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L + + + ++A + + ++L+ G +G+AFQ+ DD+LD E+GK +D Sbjct: 176 LLTFPVVAAGIVANLAANDLKSLREAGSLVGLAFQVRDDILDVTATFEEIGKTPKKDLLA 235 Query: 232 GKPTLPVILAFQR 244 K T P +L ++ Sbjct: 236 DKATYPSLLGLEK 248 >gi|256395056|ref|YP_003116620.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928] gi|256361282|gb|ACU74779.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928] Length = 340 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 4/165 (2%) Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 H TLLHDDV+D RR + A V+G + ++L GD +L+ A +V EA L+ Sbjct: 95 HNFTLLHDDVIDRDQTRRHRPTAWTVFGAENAILAGDAMLALALRLV----GGEAASRLA 150 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + +G+ + DVT ++ L + KT L A + L AL Sbjct: 151 ECVIEICDGQYEDCAFELRDDVTLDECLAMAGKKTGALLGCACALGGLAVRADPLTVAAL 210 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +G LG+AFQL DD+L G+ GK +G D K +LPV+ Sbjct: 211 DLFGRELGMAFQLTDDLLGIWGDPAVTGKPVGADLSARKKSLPVV 255 >gi|72536059|gb|AAZ73127.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium DC260] Length = 301 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 116/226 (51%), Gaps = 16/226 (7%) Query: 42 GKRLRPMLTLATA--LMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAA 97 GKR+RP+L L A + E + + LACA+E +H A+L+ DD+ +D++ +RRG+ Sbjct: 51 GKRIRPLLLLLAARDMGCELTQNGVLDLACAVEMVHAASLILDDIPSMDNAQMRRGRPTV 110 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAEGELRQLSLSKNL 154 +G ++L LLS+AF ++ A+ EA++ ++ + L Q Sbjct: 111 HREFGENVAILAAIALLSRAFEVIAIAPGLPAIHKSEAIAELSAAVGLQGLVQGQFQDLH 170 Query: 155 DVTEEDYLHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 D T+ I + KT+VLF A L+++++ A VRQ L + +LG AFQL+DD Sbjct: 171 DGTQSRSPEAIAMTNELKTSVLFRATLQMAAIAADASPQVRQRLSFFAQDLGQAFQLLDD 230 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 + D GK++ +D GK TL +L +R ++ +S Sbjct: 231 LADG---CKHTGKDVHQD--QGKSTLVQMLGADGAERRLRDHLRSA 271 >gi|218884766|ref|YP_002429148.1| Polyprenyl synthetase [Desulfurococcus kamchatkensis 1221n] gi|218766382|gb|ACL11781.1| Polyprenyl synthetase [Desulfurococcus kamchatkensis 1221n] Length = 353 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 137/298 (45%), Gaps = 41/298 (13%) Query: 41 GGKRLRPMLTLATALMLEY-RGDNHVL--LACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GGKRLR L L E+ GD + + IE + + L+HDDV+D LRRG Sbjct: 40 GGKRLRAFLALVGYWSREWGSGDLATITNVMSGIELLQSYLLIHDDVMDRDELRRGGPTV 99 Query: 98 R---------------LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 + +G+ ++ VGD+L + A + +++ E L + T + Sbjct: 100 HAWFRDKCLKEMKGDCVHYGDSQAITVGDYLEATAVEYI--SRANLPGETLRRLLETYSR 157 Query: 143 GELRQLSLSKNLDV----------TEEDYLHVIKSKTA-VLFSAALEVSSLIAG-VQNSV 190 G LR ++ + LDV +E D L V KTA L + + +G + Sbjct: 158 G-LRMVAYGQYLDVLLSNKPLGNVSERDVLLVHTLKTASYTIELPLHLGVIASGKYSEKI 216 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L SY + GIAFQL DD++ G+ + GK +G D R K TL V+ A++ G RE Sbjct: 217 LRELTSYAIPAGIAFQLRDDIIGLYGDPRQTGKPVGSDVRGKKKTLLVVKAYELG-DREV 275 Query: 251 NFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 S I D +++ E++K I+RE +L EY + +++L+ L +S Sbjct: 276 RRRLSEIYDVLRTNEVTQEHVKFVQEIVRETGSL---EYNEELIKKYVENALKALEES 330 >gi|71278749|ref|YP_267833.1| geranyltranstransferase [Colwellia psychrerythraea 34H] gi|71144489|gb|AAZ24962.1| geranyltranstransferase [Colwellia psychrerythraea 34H] Length = 300 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 25/268 (9%) Query: 13 EKVNFLILKRI----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 E++N + ++ +D ++I + ++Y + GGKR+RP L T + ++ +A Sbjct: 12 ERINDFLAAKLEGLTINDPKLI-EAMRYGLLIGGKRMRPYLAYITGEAVSADLNDIDAVA 70 Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF-------- 118 A+E IH +LLHDD+ LRRGK + T++L GD L + AF Sbjct: 71 GALECIHAYSLLHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFDILANHTF 130 Query: 119 -------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171 M I+ K + L S L + KN+ + E + LH +K T Sbjct: 131 SMNQSTAGMPIQVKLIQQLVKASGYQGMCGGQALDLAATGKNISLGELEVLHSLK--TGA 188 Query: 172 LFSAALEVSSLIAG-VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L A++ + ++ +G V + L Y +G+A+Q+ DD++D E+GK +G D Sbjct: 189 LLEASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGKPVGSDIA 248 Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTIN 258 K T P +L Q + +N + + Sbjct: 249 ANKSTYPALLGLQGAQDKAENLLQQALQ 276 >gi|282861732|ref|ZP_06270796.1| Polyprenyl synthetase [Streptomyces sp. ACTE] gi|282563548|gb|EFB69086.1| Polyprenyl synthetase [Streptomyces sp. ACTE] Length = 350 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 96/216 (44%), Gaps = 21/216 (9%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA------------RLVWGNQTSVLV 109 D V A A+E +H A ++HDD++D SALR G A R ++LV Sbjct: 73 DALVRAAAAMELVHAAAVVHDDLIDGSALRHGLPTAQFALRAAVSGRRRPAAARSLALLV 132 Query: 110 GDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGE-LRQLSLSKNLDVTEEDYLH 163 GD L+S A + + + A + +A L GE L L DV D L Sbjct: 133 GDLLMSWAGQLFVSSGLPAAYLSRARPLWAALARELIAGECLEILRTGAVPDV--RDSLK 190 Query: 164 VIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 VI+ KTA L + +AG +R+A YG+ LG AFQL DD+L GE G Sbjct: 191 VIRYKTAKYTVEQPLLIGGALAGASPDLREAFSDYGLPLGEAFQLRDDLLGLFGETARTG 250 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 K +D +PT+ + + R T E+ K + Sbjct: 251 KANADDITGRRPTVLLAETWSRATPAERKHLKGLLG 286 >gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 358 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 129/259 (49%), Gaps = 27/259 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y + +GGKR+RP L LA ++ R + A A+E +HT +L+HDD+ Sbjct: 88 EAMRYALLAGGKRVRPALCLAACVVSGGREAWAMAPAAAVEMVHTMSLVHDDLPCMDDDD 147 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----------LEALS-LVA 137 LRRGK +++G +VL GD LL+ AF + S + A+ L Sbjct: 148 LRRGKPTCHVMFGEPIAVLAGDALLALAFQHMASVDSYPPDVDPAKHTARVVRAIGELAR 207 Query: 138 CTLAEG-------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 C +EG +L ++ + + +Y+H+ KTA L A++ + ++I G Sbjct: 208 CIGSEGLVAGQVVDLEMTGSTEPVPLDRLEYIHL--HKTAALLEASVVIGAIIGGGSEEQ 265 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + L+ Y ++G+ FQ+VDD+LD E+GK G+D + K T P +L G ++ + Sbjct: 266 IERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLL----GLEKSR 321 Query: 251 NFWKSTINDGKISVENLKK 269 F + ++D K + +K Sbjct: 322 EFAEKLLSDAKEQLAYFEK 340 >gi|260461502|ref|ZP_05809749.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] gi|259032572|gb|EEW33836.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] Length = 305 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 19/238 (7%) Query: 18 LILKRICSDVEMIPDV---------VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 ++L+R+ D + ++ +++ + +GGKRLRP L + +A + G+ + +A Sbjct: 22 VLLRRLLDDRPLTGEIARPGRLMAAMRHGVLNGGKRLRPFLVMESAALFSADGEAALRVA 81 Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETK 125 A+E +H +L+HDD+ +RRG+ + T++L GD LL+ AF ++ E Sbjct: 82 AALECVHCYSLIHDDLPAMDDDDMRRGQPTVHRAFDEATAILAGDALLTLAFDIIAGEAT 141 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDV----TEEDYLHVIK---SKTAVLFSAALE 178 A +LV + + LD+ T D +I+ KT L A E Sbjct: 142 VLPAERRAALVLALARAAGAGGMVGGQTLDLEAERTPPDEAGIIRLQAMKTGALIRFACE 201 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++IAG R+ L +G +G+AFQL DD+LD + ++MGK G+D GK TL Sbjct: 202 AGAIIAGAPAEDRERLAEFGSAVGLAFQLADDLLDLTADASQMGKATGKDAAAGKATL 259 >gi|111221595|ref|YP_712389.1| geranylgeranyl pyrophosphate synthase [Frankia alni ACN14a] gi|111149127|emb|CAJ60810.1| Geranylgeranyl pyrophosphate synthase (Farnesyl diphosphate synthase, Bifunctional short chain isoprenyl diphosphate synthase) [Frankia alni ACN14a] Length = 358 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 43/253 (16%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG------DNHVLLACAIEF 73 L+ I +D++ V + ++ SGGK++RP +RG D V A A+E Sbjct: 23 LRDIDADLDPFVRVAEDVLLSGGKQVRPAFC-----YWGWRGAGGPDCDEIVTAAAALEV 77 Query: 74 IHTATLLHDDVVDDSALRRGKVAA-----------RL-----VWGNQTSVLVGDFLLSQA 117 +H L+HDDV+D S LRRG +A RL +G ++L+GD L+ A Sbjct: 78 LHACALVHDDVMDGSQLRRGAPSAQRRLTLVHRRARLGGDPDTFGRSAAILLGDLFLTWA 137 Query: 118 FCMVIETKSQEALEALSLVACTLAEGEL---RQLSLSKNLD------------VTEEDYL 162 +++ + A + GEL + L L+ + V Sbjct: 138 DDLLMASGLTPGALARAWPTYARMRGELVAGQYLDLASQVGPGASQGGAGGGQVDPARVA 197 Query: 163 HVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 + + KTA L++ +L+AG + + + ++G LG AFQL DDVL G+ Sbjct: 198 RIARYKTAGYTVVRPLQLGALLAGSRPGLLETYAAFGHPLGEAFQLRDDVLGVFGDPAVT 257 Query: 222 GKNIGEDFRNGKP 234 GK GED R+G+P Sbjct: 258 GKPAGEDLRDGRP 270 >gi|254293553|ref|YP_003059576.1| polyprenyl synthetase [Hirschia baltica ATCC 49814] gi|254042084|gb|ACT58879.1| Polyprenyl synthetase [Hirschia baltica ATCC 49814] Length = 303 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 116/232 (50%), Gaps = 21/232 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ +GGKRLRP +T+ + + + + A A+E +H +L+HDD+ L Sbjct: 43 AMRHGALAGGKRLRPFITIEVGRLFDAPEKSLLRAASALECVHAYSLVHDDLPCMDDDDL 102 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ----------EALEALSLVACTL 140 RRG + T+VL GD L + AF ++ T++ E L ALS A + Sbjct: 103 RRGLPTVHKAFDEATAVLAGDALQALAFEILANTETHGDAGVRCKLIEVL-ALSSGARGM 161 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 G++ + ++ + D ++D L+++ + KT L S A E ++I G QAL Sbjct: 162 VGGQM--IDMAPSFD--DKDALNILARMQRMKTGALISCAAEFGAIIGGANEHEHQALAG 217 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + +LG+A+Q+ DD+LD +G+ +GK + +D GK +L + R Sbjct: 218 FTTDLGLAYQIKDDLLDVQGDEAVLGKAVSKDKDAGKQNFVSLLGEESAISR 269 >gi|296140358|ref|YP_003647601.1| polyprenyl synthetase [Tsukamurella paurometabola DSM 20162] gi|296028492|gb|ADG79262.1| Polyprenyl synthetase [Tsukamurella paurometabola DSM 20162] Length = 362 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 27/229 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHV----LLAC-AIEFIHTATLLHDDVVDDS 88 ++ + GGKR+RP L D V L AC A+EF+ L+HDD++D S Sbjct: 48 LERFVLRGGKRIRPAFAWTGWLAGGGATDGDVARAALRACSALEFVQACALIHDDIIDAS 107 Query: 89 ALRRG---------KVAARLVW-------GNQTSVLVGDFLLSQAFCMVIET--KSQEAL 130 RRG ++ A+ W G T++L+GD L+ A M + + L Sbjct: 108 QTRRGYPTTHREFAELHAQRGWSGSSEKFGEATAILLGDLALAWADDMFLGAGLSPERYL 167 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGV 186 A A E G+L + + D ++ V++ KTA L V + +AG Sbjct: 168 RAARAWAAMRTEVLGGQLLDIVSEASRDESQAAAERVVRFKTAGYTVERPLHVGAALAGA 227 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + AL++ G++LG+AFQL DD+L G+ GK G+D R+GK T Sbjct: 228 SDQAITALRAIGVDLGVAFQLRDDLLGAFGDPAVTGKPSGDDLRSGKHT 276 >gi|304395256|ref|ZP_07377140.1| Polyprenyl synthetase [Pantoea sp. aB] gi|304357509|gb|EFM21872.1| Polyprenyl synthetase [Pantoea sp. aB] Length = 303 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/244 (28%), Positives = 124/244 (50%), Gaps = 22/244 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATA--LMLEYRGDNHVLLACAIEFIHTATLLHD 82 S+ +++ ++ + GKR+RP+L L A L + + LACA+E +H A+L+ D Sbjct: 36 SERDLVGAAMRDGALAPGKRIRPLLLLLAARDLGCDVTPTGLLDLACAVEMVHAASLILD 95 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----------QEAL 130 D+ +DD+ LRRG+ +G ++L LLS+AF +V + E Sbjct: 96 DMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSKAFGVVAMAEGLTAAARADAVAELS 155 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A+ + L +G+ + LS + + + L KT+ LF A+++++S++A Sbjct: 156 HAVGMQG--LVQGQFKDLS-EGDKPRSADAILMTNHYKTSTLFCASMQMASIVAEASAET 212 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 R+ L + +NLG AFQL+DD+ D + + GK+ +D GK TL +L Q R + Sbjct: 213 REQLHRFSLNLGQAFQLLDDLTD---GMADTGKDTHQD--EGKSTLVNLLGPQAVETRLR 267 Query: 251 NFWK 254 + + Sbjct: 268 DHLR 271 >gi|20429115|emb|CAD24425.1| geranyl-diphosphate synthase [Paracoccus zeaxanthinifaciens] Length = 287 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 21/254 (8%) Query: 12 MEKVNFLILKRICSDVEMIP-----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 + ++ L+ + + ++ +P D ++Y + GGKRLR L + +A + D + Sbjct: 5 LAEIRPLVEAELNAAIDALPAGDLSDAMRYAV-QGGKRLRAFLVMESARLHGLDDDASLP 63 Query: 67 LACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +A A+E +H +L+HDD+ LRRG+ + W T++L GD L + AF ++ + Sbjct: 64 VAAAVEALHAYSLVHDDLPAMDDDDLRRGQPTVHVKWTEATAILAGDALQTLAFQLLADP 123 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE------DYLHVIK---SKTAVLFSA 175 + + + LV + + LD+ E D +I+ KT L Sbjct: 124 RVGDDAARMRLVGSLAQASGAAGMVWGQALDIAAETSGVPLDLDAIIRLQGGKTGALIRF 183 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A L+AG + AL Y +G+AFQ+ DD+LD G GK +G+D K T Sbjct: 184 AATAGPLMAGADPA---ALDDYAQAVGLAFQIADDILDVEGCEAATGKRVGKDADANKAT 240 Query: 236 LPVILAFQRGTKRE 249 +L + G + E Sbjct: 241 FVSLLGLE-GARSE 253 >gi|308177871|ref|YP_003917277.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117] gi|307745334|emb|CBT76306.1| putative farnesyltranstransferase [Arthrobacter arilaitensis Re117] Length = 368 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 81/306 (26%), Positives = 133/306 (43%), Gaps = 46/306 (15%) Query: 17 FLILKRI------CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH--VLLA 68 FL K I S VE++ + + GGKRLRP+ L + ++ V L Sbjct: 32 FLAAKSIEVGQITTSAVEIVNAITS--LTRGGKRLRPLFAFWGYLGAGGQAEDRDIVRLG 89 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGK----------------VAARLVWGNQTSVLVGDF 112 A+E A L+HDD++D+S RRG+ + +G +++L GD Sbjct: 90 VALELFQAAALIHDDIIDNSDTRRGQPSVHKRFEAQHQELELAGSARNYGMASAILTGDL 149 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE------DYLHVIK 166 C+ + + + +L+ A T+ Q+ + LDV EE D +K Sbjct: 150 ------CLSLSEEVFSEISSLTAQARTIFNQMRTQVMAGQYLDVLEESAGPAYDPKEAVK 203 Query: 167 -SKTAVLFSAA-------LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 ++T V F +A + +AG S+ + ++ + LG AFQL DDVL G+ Sbjct: 204 RARTIVRFKSAKYSTENPFLLGGALAGASESLMEHYSAFALPLGEAFQLRDDVLGVFGDP 263 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278 GK G D GK T + A + E++F ++ + + E + + I+RE+ Sbjct: 264 EITGKPTGGDLLEGKRTELIAHALLLSSPEEQDFIQTRLGAVDLGKEEVLRLSSILRESG 323 Query: 279 ALVDTE 284 AL TE Sbjct: 324 ALAATE 329 >gi|126736181|ref|ZP_01751924.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2] gi|126714347|gb|EBA11215.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2] Length = 302 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 108/229 (47%), Gaps = 15/229 (6%) Query: 32 DVVKYLIF--SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 DV +++ SGGK LR L L TA ML A AIE IH +L+HDD+ Sbjct: 43 DVPAAMLYAASGGKALRAFLALETARMLGINPVAAAGAAAAIECIHAYSLVHDDLPCMDD 102 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG---- 143 LRRG+ W T+VL GD L + AF ++I+ + + L++ + A G Sbjct: 103 DDLRRGQPTVHQKWDQATAVLAGDGLQALAFELLIQAECAPRAKLNLLMSLSNAAGVRGM 162 Query: 144 ----ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + + + E + + SKT L S + V +A + R+ L YG Sbjct: 163 VGGQAADIAAETAAVPLDLEQIMDLQASKTGALISWSALVGPRMA---ETEREPLSIYGA 219 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 NLG+AFQ+ DDVLD G+ +GK +G+D GK T ++ R Sbjct: 220 NLGLAFQIADDVLDATGDAATVGKAVGKDAAAGKATFVSLMGLDGAKSR 268 >gi|67906783|gb|AAY82846.1| predicted geranylgeranyl pyrophosphate synthase CrtE [uncultured bacterium MedeBAC46A06] Length = 344 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 9/226 (3%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 E ++ I++R+ + + + + S GK LR + L+ A +L+ + A AIE Sbjct: 30 EIIHDFIIERMPQAGQPLAEAAAHHFASPGKMLRAKMALSAADLLKVDRPAALHWAAAIE 89 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 +H A+L+HDD+ D LRRG+ A +G ++ +GD+L++ +F + E + Sbjct: 90 VLHNASLIHDDICDGDRLRRGRPAVWSQFGRDVALTLGDWLVALSFELAAEAAQRAQTPM 149 Query: 133 LSLVACTLAE----GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L + T + GE R+ L D + YL KTA L +A +E + +A + Sbjct: 150 LVKILATHMKTTTLGEAREFDLQPVTDW--QHYLQGAGDKTAPLLTAPIEGVATMA-LHG 206 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNG 232 + + LG A+Q+ +D+L++ G + G ++G NG Sbjct: 207 GAAPTIGACFRALGNAYQIGNDILNFSGRDGADTCGSDLGRRAPNG 252 >gi|223043139|ref|ZP_03613186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Staphylococcus capitis SK14] gi|222443350|gb|EEE49448.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Staphylococcus capitis SK14] Length = 288 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 75/244 (30%), Positives = 122/244 (50%), Gaps = 17/244 (6%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS---GGKRLRPMLTLATALMLEYRGDNHVLLA 68 +E+VN LK+ + + D+ + +++S GGKR+RP+L L T ML A Sbjct: 5 IEEVN-TNLKQAIPESHLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLNEDYHKGFQSA 63 Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----- 121 A+E IHT +L+HDD+ RRGK+ V+G ++L GD LL++AF +V Sbjct: 64 LALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDDL 123 Query: 122 ----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 ++ K + L S + L S ++ +D+ + +H K+KT L + A+ Sbjct: 124 IEDNVKVKVLQRLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIH--KAKTGALLTFAV 181 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + IA V L + +LG+ FQ+ DD+LD G+ ++GK +G D N K T Sbjct: 182 MAAVDIAQVDQKTSHNLNEFSKHLGLMFQIKDDLLDVYGDEKKIGKAVGSDESNNKSTYV 241 Query: 238 VILA 241 +L Sbjct: 242 SLLG 245 >gi|183233246|ref|XP_001913825.1| geranylgeranyl pyrophosphate synthetase [Entamoeba histolytica HM-1:IMSS] gi|169801661|gb|EDS89395.1| geranylgeranyl pyrophosphate synthetase, putative [Entamoeba histolytica HM-1:IMSS] Length = 314 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 55/306 (17%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRG--------DNHVLLACAIEFIHTATLLHDDVVDDS 88 + GKRLRP+ +L+L + G N + ACA+E +H +TL HDD++D+ Sbjct: 4 FVMGPGKRLRPL-----SLLLFFIGGGGKIEEQKNIIRTACAMELLHDSTLAHDDIMDED 58 Query: 89 ALRRGK--------------------------VAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +RR ++ + + +++ G+ L S A + + Sbjct: 59 EMRRNAPTIVKTFYDKYIERNKEDVKTEKFLFMSRGTTYASSLAIMTGNILYSMAQRLCL 118 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E+ + A L L + L G++ +S L+ EE L++I KTA+ F + Sbjct: 119 ESGTNIAEMVLELFSV-LNYGQILDMS---GLNTVEEYNLNII-MKTAIFFKTTASIGLT 173 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AG + K +G + GIAFQ+ DD+LD +N + +G D + GK T V A Sbjct: 174 LAGRSEHDIELGKEWGEHFGIAFQMRDDLLDI-DPLNGKLRKMGSDIKEGKKTAVVWTAL 232 Query: 243 QRG--TKREKNFWKSTINDGKISVENLKKAF-----IIMRENRALVDTEYRAYSYGQKAK 295 + G +K EK F + + + + +N ++AF I+ + +V E + + QKA Sbjct: 233 KEGVLSKEEKEFVEGILKLNEKAFDN-QEAFTKFLNILRGKPSEVVRQEIKEHH--QKAL 289 Query: 296 DSLRCL 301 D+L+ L Sbjct: 290 DALKQL 295 >gi|119094186|gb|ABL61008.1| geranylgeranyl pyrophosphate synthase CrtE [uncultured marine bacterium HF10_25F10] Length = 341 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 17/230 (7%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 E ++ IL+R+ + + + D + + GK LR + L A +L+ + A AIE Sbjct: 27 EIIHDFILERMPAPGQTLADAAMHHFAAPGKMLRAKMALRAADLLKVDRPAALHWAAAIE 86 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--- 129 +H A+L+HDD+ D LRRG+ A +G ++ +GD+L++ +F + E + Sbjct: 87 VLHNASLVHDDICDGDQLRRGRPAVWSKFGRDVALTLGDWLIALSFELAAEAAQRAQTPM 146 Query: 130 -LEALSLVACTLAEGELRQLSLSKNLDVTEED-YLHVIKSKTAVLFSAALE---VSSLIA 184 L+ L+ T GE + + VT+ D YL KTA L +A LE +L Sbjct: 147 LLKILATHMKTTTVGEAHEFDPAP---VTDWDHYLQGAGDKTAPLLTAPLEGIAAMALHG 203 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNG 232 G ++ +S LG A+Q+ +D+L++ G N G ++ NG Sbjct: 204 GAAPTIGACFRS----LGNAYQIGNDILNFSGSDGANTCGSDMARRAPNG 249 >gi|226360248|ref|YP_002778026.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4] gi|226238733|dbj|BAH49081.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4] Length = 385 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 105/235 (44%), Gaps = 27/235 (11%) Query: 37 LIFSGGKRLRPMLT----LATALMLEYRGDNHVLLAC-AIEFIHTATLLHDDVVDDSALR 91 + GGKR+RP L G VL AC A+E + L+HDD++D S R Sbjct: 70 FVLRGGKRVRPAFAWTGWLGAGGDPRGPGAGPVLRACSALELVQACALVHDDIIDASTTR 129 Query: 92 RG-----------KVAARLV-----WGNQTSVLVGDFLLSQAFCMVIET-----KSQEAL 130 RG A R +G ++L+GD L+ A M+ E+ +S Sbjct: 130 RGFPTVHVEFEEQHRAGRWSGDSAHFGEGVAILLGDLALAWADDMIRESGITPDQSARIS 189 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNS 189 S + + G+ +S D + + + V + KTA L + + +AG +S Sbjct: 190 PVWSAMRTEVLGGQFLDISNEVRADESIDAAMKVNRYKTAAYTIERPLHLGAALAGADDS 249 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + A + +G ++GIAFQL DD+L G+ GK G+D R GK T ++ QR Sbjct: 250 LVSAYRRFGTDIGIAFQLRDDLLGVFGDPAVTGKPSGDDLRAGKRTALFAMSLQR 304 >gi|21672714|ref|NP_660781.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008653|sp|Q8K9A0|ISPA_BUCAP RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|21623357|gb|AAM67992.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 294 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 68/283 (24%), Positives = 137/283 (48%), Gaps = 26/283 (9%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L D+ + K F I++ + ++ +KY SGGKRLR L AT + Sbjct: 6 LYDIYYNRINKKLFEIIQELPFQDSVLFRAMKYSTLSGGKRLRACLIYATGETFQVNIAA 65 Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +++ A+E +H+ +L+HDD+ +D+ RRGK++ + +G ++L GD L AF ++ Sbjct: 66 LDVISAAVELVHSYSLIHDDLPCIDNDYFRRGKISCHIKYGENFALLAGDALQGLAFNIL 125 Query: 122 IETKSQEALEALSLVACT----------LAEGELRQLSLS-KNLDVTEEDYLHVIKSKTA 170 + +++ L + G++ L K ++++E + +++ K TA Sbjct: 126 SNSNMPGVHDSIRLKMIAEFSNAIGYSGMCIGQMLDLEKERKKINISELEKINLYK--TA 183 Query: 171 VLFSAALEVSSLIAG-VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 L ++ ++ + V L + +++G+AFQ+ DD+LD + ++ ++ E Sbjct: 184 FLIRCSIRLAYFASNNFSKEVLFILDKFSVSIGLAFQIQDDILDLKNDIKKL-----ESK 238 Query: 230 RN-GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 RN K T P+++ ++ + K +K ++E LKK F Sbjct: 239 RNKTKNTYPLLIGLKKSKIKIKELYKEAF----FTLEILKKNF 277 >gi|124026920|ref|YP_001012240.1| geranylgeranyl pyrophosphate synthase, IspA [Hyperthermus butylicus DSM 5456] gi|123977614|gb|ABM79895.1| Geranylgeranyl pyrophosphate synthase, IspA [Hyperthermus butylicus DSM 5456] Length = 312 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 2/178 (1%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 I GGKR R L L A L R ++ + A A+E IH ++L DD++D+ RRG+ AA Sbjct: 45 IARGGKRFRGFLVLEIARSLGGRIEDALDAAVAVELIHASSLALDDIIDEDVERRGQKAA 104 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 + +G + +V+ L++ A +V E A ++ GE+ + + + Sbjct: 105 WVEYGVKKTVMTVYLLVTFAHKIVEERYGFRATSRTITATLNISRGEVLD-AFTDPDSLP 163 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 E YL +K KTA LF A E+ +++AG ++ +A YG LG+ +Q+ DD++D R Sbjct: 164 PEYYLETVKLKTASLFRLAGELGAIVAGREDLYGEA-GLYGEYLGLMYQVADDIVDSR 220 >gi|6706999|gb|AAF25540.1|AF104994_10 geranyl transferase [Streptomyces coelicolor A3(2)] Length = 386 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 6/255 (2%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIETKSQEAL 130 E +H TLLHDDV+D A RR + A V+G+ ++L GD L + A + + A Sbjct: 130 ELVHNFTLLHDDVMDRDATRRHRPTAWTVFGDADAILAGDALQALALRLFAADPHPASAA 189 Query: 131 EALSLVACT--LAEGELRQLSLSKNL--DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A L C L EG+ ++ + +VT ++ L + ++KT L A V +L AG Sbjct: 190 AATRLADCVMELCEGQHADTAMERPPPDEVTLDETLVMAEAKTGALLGCACAVGALYAGA 249 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +AL ++G G+AFQL+DDV+ G+ + D K +LPV+ A GT Sbjct: 250 ATEDVEALDAFGREPGMAFQLIDDVIGIWGDPAPHRQAGRCDLAARKKSLPVVAALTSGT 309 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSS 305 + + E+L++ + + + +A +A L R +P+ Sbjct: 310 PAAAELAELYTGPYDENKEDLERTALAVERAGGRDWAQAQAADRMARAMQELARAVPEPE 369 Query: 306 WKKSLMEVVDFCLQR 320 L+ + +F +R Sbjct: 370 AAGGLLALAEFVTRR 384 >gi|227113448|ref|ZP_03827104.1| geranyltranstransferase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 303 Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 115/242 (47%), Gaps = 20/242 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L T + ++ A A+E IH +L+HDD+ Sbjct: 35 NAMEYGSLLGGKRLRPFLVYTTGELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLVA-----CT 139 LRRG+ + +G ++L GD L + AF ++ + ++ L LS +A Sbjct: 95 LRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPQVSDRDRLAMLSELAHASGVAG 154 Query: 140 LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS-- 196 + G+ L +D+ + +H + KT L AA+ + +L AG + R AL Sbjct: 155 MCGGQAFDLEAEGHQVDLAALERIH--RHKTGALIRAAVRLGALAAG--ETGRDALPHLD 210 Query: 197 -YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y +G+AFQ+ DD+LD G+ GK G D + GK T P +L K+ + ++ Sbjct: 211 RYANAIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLLGLDNARKKAQELYQE 270 Query: 256 TI 257 ++ Sbjct: 271 SL 272 >gi|159901006|ref|YP_001547253.1| polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|159894045|gb|ABX07125.1| Polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 339 Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 8/209 (3%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK LRP L + LA AI+ +H +L+HDD+ D S RRG+ +W Sbjct: 50 GKLLRPRFCLLACAAVGGDPQQAEPLAAAIQLLHDFSLIHDDIEDHSPTRRGRETVWKLW 109 Query: 102 GNQTSVLVGD--FLLSQ------AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 ++ VGD F L+Q A V + E + L EG+ +S + Sbjct: 110 EVPQAINVGDGMFTLAQLSLFRLAEVGVESSVVVEIARRFNQTIIRLCEGQYLDMSFEQR 169 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 LD++E DYL +I KTA L +AA + +++ AL ++G LG+AFQ+ DD+L Sbjct: 170 LDISEGDYLAMISRKTAALIAAAAGLGAILGNANREQAAALYNWGEALGLAFQIEDDMLG 229 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G GK D K +LP+I A Sbjct: 230 IWGAEAVTGKPDAHDIWGRKKSLPIIHAL 258 >gi|254516865|ref|ZP_05128923.1| polyprenyl synthetase [gamma proteobacterium NOR5-3] gi|219674370|gb|EED30738.1| polyprenyl synthetase [gamma proteobacterium NOR5-3] Length = 269 Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 11/205 (5%) Query: 42 GKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAA 97 GKRLRP L A A A AIE IHT +L+HDD+ +RRG+ Sbjct: 18 GKRLRPQLLQAAARATGNPVSEALAAAPAEAIELIHTYSLIHDDLPAMDDDDMRRGRPTL 77 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV- 156 + + T++LVGD L ++AF ++ + A + + LVAC + + LD+ Sbjct: 78 HVAFDEATAILVGDGLQAKAFELIASEEQLSAQQRIDLVACLAKAAGFEGMVGGQGLDIE 137 Query: 157 -TE-----EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 TE E ++ KT L +AAL + ++ + LK+ G +G+AFQ++DD Sbjct: 138 ATERTLSVEQLKNIHALKTGALITAALVMGGIVGQANPDQKHILKAVGDKIGLAFQIIDD 197 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPT 235 V+D R + +GK G+D GK T Sbjct: 198 VIDVRSDSTTLGKTAGKDAAAGKST 222 >gi|78483936|dbj|BAE47470.1| GGPP synthase [Paracoccus sp. N81106] Length = 293 Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 100/213 (46%), Gaps = 16/213 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + + S GKR R ML L A D V ACA+E +H A+L+ DD+ +DD+ L Sbjct: 34 AMSHGALSSGKRFRGMLMLLAAEASGGVCDTIVDAACAVEMVHAASLIFDDLPCMDDAGL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--------LEALSLVACTLAE 142 RRG+ A + G +VL G L+++A ++ + + + SL L Sbjct: 94 RRGQSATHVAHGESRAVLGGIALITEAMALLAGARGASGTVRAQLVRILSRSLGPQGLCA 153 Query: 143 GELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G+ L +KN V +E L KT VLF A LE+ ++I + + +G L Sbjct: 154 GQDLDLHAAKNGAGVEQEQDL-----KTGVLFIAGLEMLAVIKEFDAEEQTQMIDFGRQL 208 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 G FQ DD+LD G+ +GK+ G D P Sbjct: 209 GRVFQSYDDLLDVVGDQAALGKDTGRDAAAPGP 241 >gi|314933695|ref|ZP_07841060.1| geranyltranstransferase [Staphylococcus caprae C87] gi|313653845|gb|EFS17602.1| geranyltranstransferase [Staphylococcus caprae C87] Length = 288 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 17/238 (7%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS---GGKRLRPMLTLATALMLEYRGDNHVLLA 68 +E+VN LK+ + + D+ + +++S GGKR+RP+L L T ML + A Sbjct: 5 IEEVN-TNLKQAIPESHLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLNEDYHKGLQSA 63 Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----- 121 A+E IHT +L+HDD+ RRGK+ V+G ++L GD LL++AF +V Sbjct: 64 LALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDDL 123 Query: 122 ----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 ++ K + L S + L S ++ +D+ + +H K+KT L + A+ Sbjct: 124 IEDNVKVKVLQRLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIH--KAKTGALLTFAV 181 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + IA V L + +LG+ FQ+ DD+LD G+ ++GK +G D N K T Sbjct: 182 MAAVDIAQVDQKTSHNLNEFSEHLGLMFQIKDDLLDVYGDEKKIGKAVGSDESNNKST 239 >gi|237750142|ref|ZP_04580622.1| geranyltranstransferase [Helicobacter bilis ATCC 43879] gi|229374329|gb|EEO24720.1| geranyltranstransferase [Helicobacter bilis ATCC 43879] Length = 293 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 108/202 (53%), Gaps = 11/202 (5%) Query: 37 LIFSGGKRLRPMLTLATALM-LEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 ++ +GGKR RP L L+ + + N + +IE +HT +L+HDD+ +D++ALRR Sbjct: 36 MVLNGGKRFRPNLLLSVVCAEAKEQAKNAFDVCLSIECLHTYSLIHDDLPAMDNAALRRN 95 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 + +++L+GD L + +F ++ ++ A L++C G + + L + Sbjct: 96 HPTLHCKYDEVSAILIGDGLNTYSFYLLANAHFAPSVVA-ELISCLAENGGIGGMVLGQA 154 Query: 154 LDVTEE------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 LD E D L I + KTA L +A+L++ ++IA + +++ L +G+ LG+ FQ Sbjct: 155 LDCYFEHTTLPLDKLQFIHTHKTAKLIAASLKMGAIIANLSLDMQKFLYDFGLVLGLYFQ 214 Query: 207 LVDDVLDYRGEVNEMGKNIGED 228 + DD++D + + GK D Sbjct: 215 IRDDIIDSIQDESISGKTANND 236 >gi|119962314|ref|YP_946137.1| geranylgeranyl pyrophosphate synthase [Arthrobacter aurescens TC1] gi|119949173|gb|ABM08084.1| putative geranylgeranyl pyrophosphate synthase [Arthrobacter aurescens TC1] Length = 369 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 77/245 (31%), Positives = 110/245 (44%), Gaps = 42/245 (17%) Query: 41 GGKRLRPMLTLATALMLEYRG-------DNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK +RP+L + T L G + + +A AIE +H A LLHDDV+D +RRG Sbjct: 53 GGKFVRPLLLMETYDALHKHGPAEPHQRETAISIAAAIELLHYAFLLHDDVIDGDLVRRG 112 Query: 94 ------------------------KVAARLVWGNQTSVLVGDFLLS---QAFCMVIETKS 126 + + L W +L+GD LL+ QAF E Sbjct: 113 HPNLIGSLLAEAGETARTDGADGARAGSGLHWAQTGGILMGDMLLAATHQAFARA-ELPH 171 Query: 127 QEALEALSLVACTLAE---GELRQLSLSKNLDVTE-EDYLHVIKSKTAVL-FSAALEVSS 181 + L L L+ T+ E GE + L + + + L + KTA F L ++ Sbjct: 172 ELRLRLLDLLEHTINETVAGEQLDVGLGDGIIAPDLQTILMMCGYKTATYTFELPLRAAA 231 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AG +V AL + G +LG+AFQL DD+L G+ GK+ D R GK T I+A Sbjct: 232 TLAGADFAVENALATAGRHLGLAFQLQDDLLSTFGDPRRHGKDPFSDLREGKET--AIIA 289 Query: 242 FQRGT 246 R T Sbjct: 290 HARTT 294 >gi|296876934|ref|ZP_06900979.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 15912] gi|296432065|gb|EFH17867.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 15912] Length = 291 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 25/227 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 V Y I +GGKRLRP+L L + H +A A+E IHT +L+HDD+ +D+ Sbjct: 31 VLYSIQAGGKRLRPLLLLELLEAFGLELTEAHFQVAGALEMIHTGSLIHDDLPAMDNDDY 90 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA--------- 141 RRG++ +G ++L GD L F M++ + +A++ ++ + A Sbjct: 91 RRGQLTNHKKFGEALAILAGDALFLDPFGMIVASALPDAVKVSLILELSDASGSRGMVAG 150 Query: 142 -----EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 EGE +QL+L+ E +H +KT L + + LI +Q + Q L+ Sbjct: 151 QVLDMEGEHKQLTLA------ELQTIHA--NKTGRLLAYPFIAAGLILELQADIGQLLEK 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G LG+AFQ+ DD+LD + +GK +D K T P +L + Sbjct: 203 IGKKLGLAFQVRDDILDLVADFEALGKTPQKDLVAEKSTYPALLGLE 249 >gi|332523011|ref|ZP_08399263.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176] gi|332314275|gb|EGJ27260.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176] Length = 289 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 11/227 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV-- 84 E + ++Y SGGKR+RP+L L D+H +A A+E IHT +L+HDD+ Sbjct: 23 EQLIAAIRYSAESGGKRIRPLLLLELLEAFSVTLTDSHYDIAAALEMIHTGSLIHDDLPA 82 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLVACT 139 +D+ RRG + + T++L GD L AF ++ T + +E+LS + T Sbjct: 83 MDNDDYRRGCLTNHKKFDEATAILAGDSLFLDAFALIAGTNLSANIKVDLIESLSNSSGT 142 Query: 140 --LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + G++ + ++ ++T + + KT L + ++ IA V + + Sbjct: 143 FGMVGGQMLDMK-AEGQELTLAELQEIHSHKTGCLLAYPFWAAAKIAEVDEQILLEIYQA 201 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G +G AFQ+ DD+LD + ++GK +D K T P +L + Sbjct: 202 GQKVGHAFQVRDDILDVTADFADLGKTPHKDLVAEKMTYPRLLGLEE 248 >gi|291449452|ref|ZP_06588842.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] gi|291352399|gb|EFE79303.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] Length = 348 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 15/227 (6%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 +D E +P S GK +R LT+ A G++ VL A A+E IHT +L+HDD+ Sbjct: 49 ADGEPVPG-------SQGKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDI 101 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE-- 142 +D RR + +G +VL GD L + A + + A+ +A L + Sbjct: 102 MDGDETRRRRPTLWKAYGTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQLAGALGDLV 161 Query: 143 -GELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 G+ + L S V +Y + KT L A + + +AG S +AL Sbjct: 162 HGQAQDLLFESRPWSGPGAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDL 221 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G ++G+AFQ VDD+L G+ GK + D R K T PV+ A Sbjct: 222 AGRHVGVAFQAVDDLLGIWGDPQVTGKPVHSDLRRLKKTFPVLAALS 268 >gi|227495997|ref|ZP_03926308.1| geranylgeranyl pyrophosphate synthase [Actinomyces urogenitalis DSM 15434] gi|226834485|gb|EEH66868.1| geranylgeranyl pyrophosphate synthase [Actinomyces urogenitalis DSM 15434] Length = 405 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 70/299 (23%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLL---------ACAIEFIHTATLLHDDVVDD 87 ++ GGKR+R +L + L+ G L A+E + L+HDDV+D Sbjct: 68 VLLKGGKRMRALLA-GLGIALDSHGPARTALLSSPLVASAGAALELYQASALVHDDVIDA 126 Query: 88 SALRRGKVAAR----------------LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 + RRG+ AA L +G ++L+GD LLS C +E Sbjct: 127 ALTRRGEPAAHRRLAQVHRDHGWLTEPLTFGTSGAILLGDLLLSA--C------GEEMGH 178 Query: 132 ALSLVACTLAEGEL---------RQLSLSKNLDVTEE--------------------DYL 162 A++ V + A ++++ + LD+ E + L Sbjct: 179 AVTEVGVSPAAATAARQAFDRMTSEVAVGQYLDLRSEVVPLPGPEENPVEAGQTMHRNAL 238 Query: 163 HVIKSKTA---VLFSAALEVSSLIAGVQNSVRQA--LKSYGMNLGIAFQLVDDVLDYRGE 217 V++ K+A V++ L + +L+AGV A L +G +GIAFQL DD+L G+ Sbjct: 239 GVVRRKSARYSVMYP--LLIGALLAGVDPDCALAARLAQFGEEVGIAFQLRDDLLGVLGD 296 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 GK +G+D R GK T+ + L +QR + + +S + + + S +++ +A +MR+ Sbjct: 297 PQVTGKPVGDDLREGKRTVLLALTWQRAGQEGRELLRSVLANREASSQDIAQACSLMRQ 355 >gi|254497873|ref|ZP_05110638.1| geranyltranstransferase [Legionella drancourtii LLAP12] gi|254352871|gb|EET11641.1| geranyltranstransferase [Legionella drancourtii LLAP12] Length = 294 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 21/248 (8%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-- 66 +K E V I+ + I + Y +F GGKR+RP+L T +++ D VL Sbjct: 6 IKRHEHVLEQIINESSVPAQQIHLAMNYSLFPGGKRIRPILVYLTGHLIDV--DPQVLDV 63 Query: 67 LACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-VIE 123 +A A+E H +L+H +DD LRRGK + + T++LVGD + QA + V+ Sbjct: 64 IAAAVELTHCYSLIHDDLPAMDDDDLRRGKPSCHKAFDEATAILVGDGM--QALAIEVLL 121 Query: 124 TKSQEALEALSLVACT-----------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 T + + ++A T + G+ LS +TEE + KT L Sbjct: 122 THLSPLVHPVQVIAITQELVKASGISGMVSGQSLDLSELAKSSITEEQLREIHHLKTGRL 181 Query: 173 FSAALE-VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 SA +E V + V + AL++Y ++G+ FQ+ DD LD+ +GK D N Sbjct: 182 ISACIEMVLAAKDTVSEQTKAALRTYASHIGLVFQMQDDYLDHYAPTELLGKGRSSDLAN 241 Query: 232 GKPTLPVI 239 K T + Sbjct: 242 QKTTFATL 249 >gi|255321733|ref|ZP_05362888.1| geranyltranstransferase [Campylobacter showae RM3277] gi|255301213|gb|EET80475.1| geranyltranstransferase [Campylobacter showae RM3277] Length = 388 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 106/212 (50%), Gaps = 21/212 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDS 88 + + Y + SGGK R ML A + R + +A A E +H+ +L+HDD+ +DDS Sbjct: 133 EALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAAFHVALAFETMHSYSLIHDDLPAMDDS 192 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT--------- 139 LRRG+ + + + T++L GD L + AF + ++ L+A + C Sbjct: 193 DLRRGQPSLHVKFDEVTAILAGDALNTHAFYQI----AKAPLDADVRIKCVEILSRNAGI 248 Query: 140 --LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 +A G+ ++ L + E +LH+ KTA L +A+L+ ++AG+ + + Sbjct: 249 YGMALGQAVDCYFENQKLGLEELKFLHI--HKTARLIAASLQAGCVVAGLDEAEAARIYD 306 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 G++LG+AFQ+ DD++D GK D Sbjct: 307 IGLDLGLAFQIADDIIDATQSAETAGKPTHND 338 >gi|322387923|ref|ZP_08061530.1| geranyltranstransferase [Streptococcus infantis ATCC 700779] gi|321141196|gb|EFX36694.1| geranyltranstransferase [Streptococcus infantis ATCC 700779] Length = 291 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 31/245 (12%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDVVDDSA- 89 + V Y I +GGKR+RP L L L+ H +A A+E IHT +L+HDD+ Sbjct: 29 EAVLYSIHAGGKRIRPYLLLEVLESLQVPITIAHAQVAAALEMIHTGSLIHDDLPAMDDD 88 Query: 90 -LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA------- 141 RRG + +G ++L GD L + ++ + ++ + L+A Sbjct: 89 DFRRGSLTNHKKFGEALAILAGDALFLDPYALIAQANLPNEIK-VDLIASLSLSSGSMGM 147 Query: 142 --------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 EGE K+L++ E +H +KT L + + + +IA + +++ Sbjct: 148 VAGQVLDMEGE------GKHLNLEELQTIHA--NKTGKLLAFPFQAAGVIAELDENLQIQ 199 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 LK+ G +G+AFQ+ DD+LD E+GK +D + K T P +L G K F Sbjct: 200 LKTVGELIGLAFQVRDDILDVTASFEEIGKTPQKDLQAEKSTYPALL----GLDEAKVFC 255 Query: 254 KSTIN 258 T+N Sbjct: 256 NRTLN 260 >gi|154174645|ref|YP_001409121.1| geranyltranstransferase [Campylobacter curvus 525.92] gi|153793122|gb|EAU00317.2| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Campylobacter curvus 525.92] Length = 300 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 38/245 (15%) Query: 37 LIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 ++ +GGK R L L L + N + +A +E +HT +L+HDD+ +DD+ LRRG Sbjct: 32 MLKAGGKHFRAQLLLGVVDALRPQLTQNAMRVALGLEMMHTYSLIHDDLPAMDDAPLRRG 91 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-------TLAEGEL- 145 + T++L GD L +QAF + S+ LEA +V C A G + Sbjct: 92 VPTLHTRYDEVTAILAGDALNTQAFYEI----SRADLEAPVVVKCVEILSANAGASGMVL 147 Query: 146 --------------------RQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 +L L+ K L++ E ++LH+ KTA L +A+LE+ ++IA Sbjct: 148 GQALDCFFENSDKADVKNAKNRLGLAQKRLNLDELEFLHI--HKTAKLIAASLEMGAVIA 205 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + + + + G++LG+AFQ+ DD++D + +E GK + D T + + R Sbjct: 206 ALDAAQCERIYGIGLDLGLAFQIEDDLIDATSDESEAGKPVHNDVTKNSFTNLLGIDGAR 265 Query: 245 GTKRE 249 +K E Sbjct: 266 ASKNE 270 >gi|126734161|ref|ZP_01749908.1| Geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2] gi|126717027|gb|EBA13891.1| Geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2] Length = 283 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 20/270 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--D 86 ++Y + GG R+RP + + A+ GD+ L A+E IH A+L+HDD+ D Sbjct: 20 ALEYAVTPGGARIRPTILTSVAMAC---GDDRPELTNAAGVALEVIHCASLVHDDLPCFD 76 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 D+ +RRGK A + +VL GD L+ F ++ S AL L+ L Sbjct: 77 DADMRRGKPAVHRAYSEPLAVLAGDSLIIMGFQILARAASDMPDRALRLID-ILGTRTGM 135 Query: 147 QLSLSKNLDVTEEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + ED + + ++KT LF AA ++ ++ AG + + L G +G Sbjct: 136 PFGICAGQGWESEDQIDLSAYHQAKTGALFIAATQMGAVAAGQEAEPWEEL---GARIGE 192 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQ+ DD+ D + +GK G+D +G+P Q +R + I+ S Sbjct: 193 AFQVADDLRDALCDEQTLGKPAGQDDLHGRPNAVASYGVQGAIQRFDDILGGAIS----S 248 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQK 293 + + + + RA D A + G+ Sbjct: 249 IPSCPGEAALAQMVRAYADKLVPAGARGRP 278 >gi|13473247|ref|NP_104814.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Mesorhizobium loti MAFF303099] gi|14023995|dbj|BAB50600.1| geranyltranstransferase; farnesyl-diphosphate synthase [Mesorhizobium loti MAFF303099] Length = 305 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 116/238 (48%), Gaps = 19/238 (7%) Query: 18 LILKRICSDVEMI-----PD----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 ++L+R+ D + PD +++ + +GGKRLRP L + +A + G+ + +A Sbjct: 22 VLLRRLLDDRPLSGEIARPDRLMAAMRHGVLNGGKRLRPFLVMESAALFSADGEAALRVA 81 Query: 69 CAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETK 125 A+E +H +L+HDD+ LRRG+ + T++L GD LL+ AF +V E Sbjct: 82 AALECVHCYSLIHDDLPAMDDDDLRRGQPTVHKAFDEATAILAGDALLTLAFDIVASEAT 141 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDV----TEEDYLHVI---KSKTAVLFSAALE 178 A +LV + + LD+ T D +I KT L A E Sbjct: 142 VLPADRRAALVLALARAAGAGGMVGGQKLDLEAEQTPPDEAGIITLQAMKTGALIRFACE 201 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++IAG R+ L +G +G+AFQL DD+LD + +MGK G+D GK TL Sbjct: 202 AGAIIAGAPAEDRERLAEFGSAIGLAFQLADDLLDLTADAGQMGKATGKDAAAGKGTL 259 >gi|328541834|ref|YP_004301943.1| Geranyltranstransferase protein [polymorphum gilvum SL003B-26A1] gi|326411586|gb|ADZ68649.1| Geranyltranstransferase protein [Polymorphum gilvum SL003B-26A1] Length = 303 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 22/229 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + +++ GGKRLRP+L + TA + D A A+E IH +L+HDD+ Sbjct: 43 EAMRHAALGGGKRLRPVLMVETARLFGRADDGVYRAAAALECIHCYSLVHDDLPAMDDDD 102 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----------SQEALEALSLVAC 138 LRRG+ + T++L GD LL+ AF ++ E SQE L+ A Sbjct: 103 LRRGRPTVHKAFDEATAILAGDALLTLAFDLIAEAPVHPDPAVRLRLSQE----LARAAG 158 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIA--GVQNSVRQALK 195 + L L V E + +++ KT L A +++A G ++ R + Sbjct: 159 VGGMAGGQMLDLEAEHRVRSETEIRTLQAMKTGALLRYACRAGAILADAGAEDVAR--MT 216 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G +G+AFQL DD+LD + + +GK G+D GK TL + Q+ Sbjct: 217 RFGEVVGLAFQLADDLLDLEAQADAVGKATGKDAAAGKATLVALYGPQQ 265 >gi|291457724|ref|ZP_06597114.1| short chain isoprenyl diphosphate synthase [Bifidobacterium breve DSM 20213] gi|291380777|gb|EFE88295.1| short chain isoprenyl diphosphate synthase [Bifidobacterium breve DSM 20213] Length = 363 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 112/227 (49%), Gaps = 34/227 (14%) Query: 41 GGKRLRPMLTLAT--ALMLEYRG------DNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 GGKRLR +LTL ALM + D LACAIE TA L+HDD++D+S LRR Sbjct: 52 GGKRLRALLTLDAFDALMAQTGSSTPDMRDAMTDLACAIEVFQTAALVHDDIIDESDLRR 111 Query: 93 GKVAARLVW---------GNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTL 140 GK +A G+ +++GD L + C+ I ++ L +A++ T+ Sbjct: 112 GKPSAHRALEQAVHSGAIGHGLGLMLGDILATA--CIEIARRAARRLDNTDAINEAFLTM 169 Query: 141 A-EGELRQ-------LSLSKNLDVTEEDYLHVIKSKTA---VLFSAALEVSSLIAGVQNS 189 E E+ Q L+ ++ D + L+V + KTA + + + A + Sbjct: 170 QREVEIGQVLDLAVELTPLEDPDALVDASLNVFRWKTASYTTIAPLLFALLAAGADPAEA 229 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +QAL + G LG+AFQL DD+LD G GK +G D R GK T+ Sbjct: 230 WQQAL-AVGRPLGLAFQLADDLLDVVGSSRNTGKPVGGDIREGKRTV 275 >gi|296392961|ref|YP_003657845.1| polyprenyl synthetase [Segniliparus rotundus DSM 44985] gi|296180108|gb|ADG97014.1| Polyprenyl synthetase [Segniliparus rotundus DSM 44985] Length = 340 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 5/180 (2%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + A AIE IH L+HDD++D RRG+ A + +G ++L+GD LL+ A + Sbjct: 81 ITAATAIEMIHNFGLIHDDIMDQDEERRGRKAVWVAYGTGMAILLGDILLATAVKIAASV 140 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS-AALEVSSLI 183 + + + L EG+L L + N+ T E+ + + KTA LF AA+ ++ L Sbjct: 141 GNTRIADIFNQAIGKLIEGQL--LDMGSNIGTTLEELWGIAEKKTASLFELAAMSIAEL- 197 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A V +A++S+ + G+AFQ ++D + N D +N + TLP +L Q Sbjct: 198 ACVTQRQGEAMESFSRHYGVAFQYMNDAASFFAG-NSHDPRALSDIKNRRATLPAVLLVQ 256 >gi|239992468|ref|ZP_04713132.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 11379] Length = 349 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 104/226 (46%), Gaps = 15/226 (6%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 +D E +P S GK +R LT+ A G++ VL A A+E IHT +L+HDD+ Sbjct: 50 ADGEPVPG-------SQGKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDI 102 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE-- 142 +D RR + +G +VL GD L + A + + A+ +A L + Sbjct: 103 MDGDETRRRRPTLWKAYGTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQLAGALGDLV 162 Query: 143 -GELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 G+ + L S V +Y + KT L A + + +AG S +AL Sbjct: 163 HGQAQDLLFESRPWSGPGAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDL 222 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G ++G+AFQ VDD+L G+ GK + D R K T PV+ A Sbjct: 223 AGRHVGVAFQAVDDLLGIWGDPQVTGKPVHSDLRRLKKTFPVLAAL 268 >gi|315655468|ref|ZP_07908367.1| polyprenyl synthetase [Mobiluncus curtisii ATCC 51333] gi|315490123|gb|EFU79749.1| polyprenyl synthetase [Mobiluncus curtisii ATCC 51333] Length = 361 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 42/247 (17%) Query: 42 GKRLRPM------LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GKR R + ++ A L D + L ++E T+ L+HDD++D++ RRG Sbjct: 50 GKRFRAIAAYMGWVSAAGPLRTGEIPDQLLDLGASLELFQTSALVHDDIIDNAIKRRGLP 109 Query: 96 AARLVW-----------GNQTSVLVGDFLLSQA---FCMVIETKSQE-ALEALSLVACTL 140 AA++ + G+ ++L GD L + A F I T S E A A +L Sbjct: 110 AAQIAFMTSFPMGGPRFGDSAAILWGDLLYAAANSYFSQAISTLSMENAHRASNLFVTMQ 169 Query: 141 AE---GELRQLS-----LSKNLDVTEEDYLHVIKSKTA-------VLFSAALEVSSLIAG 185 AE G+ LS LS ++ + E + +IK KTA +L AAL G Sbjct: 170 AEVAYGQFLDLSAETRELSPDMPPSREAAMEIIKHKTARYSVVIPLLLGAALR------G 223 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 +S+ + L+ + LG+A+QL DD L G+ GK G+D R GK T + LA++ Sbjct: 224 ASDSLIEQLEGFATPLGVAYQLRDDDLGIFGDQELTGKPSGDDIRLGKRTAQLALAWEMT 283 Query: 246 TKREKNF 252 R +++ Sbjct: 284 DDRGRDY 290 >gi|289157786|gb|ADC84423.1| geranylgeranyl diphosphate synthase [Vibrio campbellii] Length = 287 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 100/182 (54%), Gaps = 7/182 (3%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y + +GG R+R + L +L L ++ + LA A+E +H A+L+HDD+ D +LRRG+ Sbjct: 35 YHLMTGGSRIRMRVCLDMSLCLGLNDEDAMRLASAVELLHNASLIHDDIQDGDSLRRGQS 94 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVACTLAEGELRQLSLS 151 A + +G ++ GD+L+++AF ++ S + LEA EG+ L+ Sbjct: 95 AVWVKFGTNVAICTGDYLIARAFGILANISSPNVLPQLLEATQNAVSVTVEGQNADLTAK 154 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 ++ ++ ++Y + + K L + +LE+ + +G N + A + +L IA+Q++DD+ Sbjct: 155 EH--ISPQNYESIAEKKAGPLLALSLELPLISSGRLNEIPTA-RHAASSLAIAYQILDDI 211 Query: 212 LD 213 D Sbjct: 212 KD 213 >gi|239946000|ref|ZP_04697937.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] Length = 323 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 104/226 (46%), Gaps = 15/226 (6%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 +D E +P S GK +R LT+ A G++ VL A A+E IHT +L+HDD+ Sbjct: 24 ADGEPVPG-------SQGKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDI 76 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE-- 142 +D RR + +G +VL GD L + A + + A+ +A L + Sbjct: 77 MDGDETRRRRPTLWKAYGTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQLAGALGDLV 136 Query: 143 -GELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 G+ + L S V +Y + KT L A + + +AG S +AL Sbjct: 137 HGQAQDLLFESRPWSGPGAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDL 196 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G ++G+AFQ VDD+L G+ GK + D R K T PV+ A Sbjct: 197 AGRHVGVAFQAVDDLLGIWGDPQVTGKPVHSDLRRLKKTFPVLAAL 242 >gi|328478740|gb|EGF48346.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus MTCC 5462] Length = 176 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 5/180 (2%) Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GE+ Q S L T YL I KTA LF+ A + I + + ++A +G LG Sbjct: 2 GEVDQNGPSAPLIPTVNAYLSAISGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLG 61 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQ++DD+LDY + K ED NG TLP+I A+Q + K K+ + Sbjct: 62 MAFQMIDDLLDYTQTAKTLNKPALEDLNNGIVTLPLIYAYQTVPDQLKPLTKT----AEQ 117 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 N + I+R++ L A++Y +A +L LP S K +L ++ L+R + Sbjct: 118 IAANADEIAAIVRKH-GLPQAHQLAFTYTHRAITALDPLPSSPTKVALTKLTQQLLKRTH 176 >gi|294786992|ref|ZP_06752246.1| putative geranylgeranyl pyrophosphate synthase [Parascardovia denticolens F0305] gi|315226633|ref|ZP_07868421.1| bifunctional short chain isoprenyl diphosphate synthase [Parascardovia denticolens DSM 10105] gi|294485825|gb|EFG33459.1| putative geranylgeranyl pyrophosphate synthase [Parascardovia denticolens F0305] gi|315120765|gb|EFT83897.1| bifunctional short chain isoprenyl diphosphate synthase [Parascardovia denticolens DSM 10105] Length = 371 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 90/298 (30%), Positives = 142/298 (47%), Gaps = 41/298 (13%) Query: 41 GGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GGKRLR +L T L E D + LACAIE T L+HDD++DDS LRRG +A Sbjct: 54 GGKRLRALLLCRTCQALRLPEEDWDAAIDLACAIEIFQTGALVHDDIIDDSDLRRGAPSA 113 Query: 98 RLVWGNQ--------------TSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAE 142 + + +++GD L +++ ++ E S+ ++ E+L V T Sbjct: 114 HKAFASHLLKRSSTARQDGLGLGLMLGDLLATESVDLIQEASSRLSVPESLKSVIMTAFL 173 Query: 143 GELRQLSLSKNLDVTEEDY-LHVIKS-----------KTAVLFS-AALEVSSLIAGV-QN 188 RQ+ + + LD++ E LH S KTA + A L ++ L G+ Q Sbjct: 174 TMHRQVEIGQVLDLSMETVDLHDPASIEGGALATYVWKTASYTTIAPLRIAFLACGLDQE 233 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + + ++ G+ LG+AFQL DD++D G GK +G D GK T+ + A + Sbjct: 234 TSHEVSQAVGLPLGVAFQLKDDLIDVTG--LHTGKPVGGDIIEGKRTVLLADALSCANEE 291 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRAL------VDTEYRAYSYG-QKAKDSLR 299 EK + + K + N++ A I R+ AL +D+ YR G +KA D ++ Sbjct: 292 EKETLLTLYSARKRNQSNVRTAVEIFRKTGALERNQKRIDSLYRQARSGLEKALDHMQ 349 >gi|289706465|ref|ZP_06502819.1| polyprenyl synthetase [Micrococcus luteus SK58] gi|289556784|gb|EFD50121.1| polyprenyl synthetase [Micrococcus luteus SK58] Length = 358 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 78/234 (33%), Positives = 109/234 (46%), Gaps = 33/234 (14%) Query: 36 YLIFSGGKRLRPMLT-----LATALMLEYRGDNHV-LLACAIEFIHTATLLHDDVVDDSA 89 ++ GK +RP L LATA + G V L A E +HTA L+HDDV+D Sbjct: 44 HVHVGAGKLIRPRLVELGWRLATADPVPPSGRAAVDRLGAAFELLHTALLVHDDVIDRDT 103 Query: 90 LRRGKVA----------ARLV-------WGNQTSVLVGDFLLSQAF-----CMVIETKSQ 127 LRRG+ A AR V G +++ GD LL+QAF C ++ Sbjct: 104 LRRGQPAVHASARHRLEARGVPAADAAHAGVAVALIAGDVLLTQAFRLAATCAADIARAA 163 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEED----YLHVIKSKTA-VLFSAALEVSSL 182 EA + A A GEL + L + EE L + + KTA A L +L Sbjct: 164 EAAAVVFDAAAVTAAGELEDVLLGLSRHTGEEPDPDRILAMQRLKTAHYTVGAPLRAGAL 223 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +AG + +A+ G +LG A+Q++DDVL G+ E GK+ D R GK T+ Sbjct: 224 LAGADPGLARAMGEAGADLGAAYQVIDDVLGVFGDPGETGKSADGDLREGKATV 277 >gi|114765815|ref|ZP_01444908.1| geranylgeranyl pyrophosphate synthetase [Pelagibaca bermudensis HTCC2601] gi|114541814|gb|EAU44851.1| geranylgeranyl pyrophosphate synthetase [Roseovarius sp. HTCC2601] Length = 289 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 18/244 (7%) Query: 23 ICSDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 + SD +P ++Y +GGK LR L L A + + + + ACAIE IH +L+ Sbjct: 20 VLSDAADLPVLHAMRYAT-TGGKGLRGWLVLEGARLHDVAPERALWPACAIEAIHAYSLV 78 Query: 81 HDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 HDD+ LRRG W T+VL GD L + F MV + + + + Sbjct: 79 HDDLPCMDDDDLRRGLPTVHRKWDEATAVLAGDALQALGFEMVADPRCHPDPLVRADLTL 138 Query: 139 TLAEGE-LRQLSLSKNLDVTEE------DYLHVIK---SKTAVLFSAALEVSSLIAGVQN 188 +LA R + L + LD+ E D + KT L + + E + +A + Sbjct: 139 SLARAAGARGMVLGQALDMAAERADAPLDLQQITALQAGKTGALIAWSAEAGARLA---H 195 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + L +Y LG+AFQ+ DD+LD G+ +GK +G+D GK T +L + R Sbjct: 196 ADLAPLTAYAERLGLAFQIADDILDVEGDAETVGKAVGKDAGRGKATFVSLLGLEGAKAR 255 Query: 249 EKNF 252 + Sbjct: 256 ATSL 259 >gi|227504679|ref|ZP_03934728.1| geranylgeranyl pyrophosphate synthase [Corynebacterium striatum ATCC 6940] gi|227198689|gb|EEI78737.1| geranylgeranyl pyrophosphate synthase [Corynebacterium striatum ATCC 6940] Length = 363 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 41/269 (15%) Query: 13 EKVNFLILKRICSDVEMIPDVV------KYLIFSGGKRLRPMLTLAT---ALMLEYRGDN 63 EK++ + +R E+ VV + + GGKR+RP A A LE D Sbjct: 18 EKLSEFLAQRRPEVAEIGEPVVNATNFLESFVLDGGKRIRPTYAWAGFLGAHGLESGEDA 77 Query: 64 HVLL--ACAIEFIHTATLLHDDVVDDSALRRGK------VAARL----------VWGNQT 105 + A ++EFI L+HDD++D S RRG VAA+ +G Sbjct: 78 QAMATAASSLEFIQACALIHDDIIDSSDTRRGNPTVHRAVAAQHRAKGYHGDADFFGQSV 137 Query: 106 SVLVGDFLLSQAFCMVIETK-SQEALE----ALSLVACTLAEGELRQLSL----SKNLDV 156 ++LVGD L+ A M+ + S AL S + + G++ +SL S++L + Sbjct: 138 AILVGDLALAWAEDMLQGSGLSGAALHRARGPWSGMRTEVIGGQILDISLEAAGSEDLAL 197 Query: 157 TEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 V + KTA L + + +AG + ++ A + YG ++GIAFQL DD L Sbjct: 198 ANS----VNRYKTAAYTIERPLHLGAAVAGAEPALIDAFRGYGRDIGIAFQLRDDQLGVF 253 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G+ GK G+D R GK T+ + LA Q Sbjct: 254 GDPAITGKPAGDDLREGKRTVLLSLALQH 282 >gi|260431854|ref|ZP_05785825.1| geranyltranstransferase [Silicibacter lacuscaerulensis ITI-1157] gi|260415682|gb|EEX08941.1| geranyltranstransferase [Silicibacter lacuscaerulensis ITI-1157] Length = 288 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 80/267 (29%), Positives = 120/267 (44%), Gaps = 27/267 (10%) Query: 32 DVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 DV + + ++ GGKRLR L L +A + + A IE +H +L+HDD+ Sbjct: 28 DVTRAMAYATQGGKRLRGFLVLESARLHGMDETCAIWPATGIEALHAYSLVHDDLPCMDD 87 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVACTLAEGE- 144 LRRG+ W +VL GD L + AF C E E L+L TLA+ Sbjct: 88 DDLRRGRPTVHKQWNEGIAVLAGDALQALAFELCARPEVGPAEIRADLAL---TLAQAAG 144 Query: 145 LRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 R + L + LD+ E D + KT L + + +AG +N R ++ Sbjct: 145 ARGMVLGQALDIAAETAQQPLSLEDITRLQAGKTGALIEWSGCAGARLAG-ENPER--MR 201 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK- 254 Y LG+AFQ+ DD+LD G+V + GK + +D GK T +L R Sbjct: 202 LYSRALGLAFQIADDILDVEGDVQKAGKRLQKDAEAGKATFVSLLGLDAAKARAAELVDE 261 Query: 255 --STINDGKISVENLKKA--FIIMREN 277 + ++ E LK+A F+I RE+ Sbjct: 262 ACAALDSYGERAETLKEAARFVIARES 288 >gi|302525469|ref|ZP_07277811.1| geranylgeranyl pyrophosphate synthase [Streptomyces sp. AA4] gi|302434364|gb|EFL06180.1| geranylgeranyl pyrophosphate synthase [Streptomyces sp. AA4] Length = 375 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 77/277 (27%), Positives = 117/277 (42%), Gaps = 46/277 (16%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG----------DNHVLLACAIEFIHTATLLH 81 + + + GGKR+RP +RG + + ++E I L+H Sbjct: 53 EALSGFVLGGGKRIRPTFA-----WWGWRGAGGAASGPLAEGALQAVASLELIQACALIH 107 Query: 82 DDVVDDSALRRGK----VAAR------------LVWGNQTSVLVGDFLLSQAFCMVIETK 125 DD++D S RRG+ VAA V+G ++VLVGD L+ A M E Sbjct: 108 DDLIDSSDSRRGRPTVHVAAEKLHAGRGWLGSPSVFGLASAVLVGDLALAWADDMFAEAP 167 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNL---------DVTEEDYLHVIKSKTAV-LFSA 175 L A ++ A A +R L+ D + E L + + KTA Sbjct: 168 ----LPAETIAAARPAWRAMRTEVLAGQYLDVRTQAVGDASPEAALRIDRLKTAAYTVQR 223 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L + + +AG + L +G ++G+AFQL DD+L G+ + GK G+D R GK T Sbjct: 224 PLHLGASLAGADEQLIATLLEFGGDVGVAFQLRDDLLGVFGDPSVTGKPAGDDLREGKRT 283 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 L V L Q +R + I D I +L A + Sbjct: 284 LLVALGLQLAAERGDHAAAKVIAD-AIGAADLAGATV 319 >gi|297243593|ref|ZP_06927524.1| bifunctional short chain isoprenyl diphosphate synthase [Gardnerella vaginalis AMD] gi|296888344|gb|EFH27085.1| bifunctional short chain isoprenyl diphosphate synthase [Gardnerella vaginalis AMD] Length = 368 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 39/284 (13%) Query: 6 DLTLKDME-KVNFLILKRICSDVE---------MIPDVVKYLIFS--GGKRLRPMLTLAT 53 + +L D+E ++ FLI ++ + +E + V+K I S GGK LR +LT++ Sbjct: 8 NYSLNDIESRITFLISQQFNTGLEDNLSSTCAQTLQQVIKQAIVSSEGGKLLRALLTISA 67 Query: 54 ALMLEYRGDNHVL-------LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106 + + +ACA+E TA L+HDD++D+S LRRGK +A + Sbjct: 68 FYAASKETNIQKIHEQSVFDIACALEVFQTAALIHDDIIDESYLRRGKPSAYCALSKACN 127 Query: 107 ---------VLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAEGELRQLSLS- 151 +++GD L +++F C T +E L A + + + G++ LS+ Sbjct: 128 NKHIGTGLGLMLGDLLATESFDIARNCAKNFTYGEELLAAFASMQRNVGIGQVLDLSIEM 187 Query: 152 ---KNLDVTEEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSVRQAL-KSYGMNLGIAFQ 206 N E L+V + KTA + A L + L A +Q + L S G +LG+AFQ Sbjct: 188 MQLDNPIQLAESSLNVFRWKTASYTTVAPLTLGFLAANMQPTEAYNLANSIGNSLGVAFQ 247 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD+LD + GK IG D R GK + + A Q G E+ Sbjct: 248 IADDLLDIVSDSKITGKPIGGDIREGKRAVLLADALQYGNDNER 291 >gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii] gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii] Length = 261 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 10/222 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GG+R P+ +A ++ D+ + ACA+E I + + DD+ +DDS Sbjct: 3 EAMRYAV-GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDSE 61 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVACT-LAEG 143 LR GK +G T++ G LL+ F + +T ++ E + T L G Sbjct: 62 LRHGKPTVHRAFGIPTALFAGTALLALGFEHLAARYSGDTAARMVAEVSRAIGSTGLLAG 121 Query: 144 ELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + L + E + L + KT+ L A+L ++ G +AL++YG G Sbjct: 122 QAVDLGIENPDRAVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYGRVTG 181 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + +Q+VDDV D + E+GK G+D GK T IL + Sbjct: 182 LLYQIVDDVADATKTMEELGKIPGQDAMAGKSTYSTILGVDK 223 >gi|63034220|gb|AAY28422.1| geranylgeranyl diphosphate synthase [Paracoccus haeundaensis] Length = 293 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 14/212 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + + S G+R R ML L A D V ACA+E +H A+L+ DD+ +DD+ L Sbjct: 34 AMSHGALSSGRRFRGMLMLLAAEASGGVCDTIVDAACAVEMVHAASLIFDDLPCMDDAGL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--------LEALSLVACTLAE 142 RRG+ A + G +VL G L+++A ++ + + + SL L Sbjct: 94 RRGRPATHVAHGESRAVLGGIALITEAMALLAGARGASGTVRAQLVRILSRSLGPQGLCA 153 Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 G+ L +KN E++ KT VLF A LE+ ++I + + +G LG Sbjct: 154 GQDLDLHAAKNGAGVEQEQ----DLKTGVLFIAGLEMLAVIKEFDAEEQTQMIDFGRQLG 209 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 FQ DD+LD G+ +GK+ G D P Sbjct: 210 RVFQSYDDLLDVVGDQAALGKDTGRDAAAPGP 241 >gi|227327511|ref|ZP_03831535.1| geranyltranstransferase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 303 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 12/238 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L T + ++ A A+E IH +L+HDD+ Sbjct: 35 NAMEYGSLLGGKRLRPFLVYTTGELFGMSLESLDAPAAAVECIHAYSLIHDDLPAMDDDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG+ + +G ++L GD L + AF ++ + + + L++++ + Sbjct: 95 LRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPQVSDRDRLAMISELAHASGVAG 154 Query: 148 LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSYGM 199 + + D+ E + + + KT L AA+ + +L AG + L Y Sbjct: 155 MCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGALAAGETGRAALPHLDRYAN 214 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ GK G D + GK T P +L K+ + ++ ++ Sbjct: 215 AIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLLGLDNARKKAQELYQESL 272 >gi|292493567|ref|YP_003529006.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4] gi|291582162|gb|ADE16619.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4] Length = 329 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 15/222 (6%) Query: 29 MIPDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 + P +K + I GKR+R L L + ++ + A AIE I A+L+HDD VD Sbjct: 29 LPPPQIKTIQQIIRDGKRVRGCLVCLINNALGGKTEDALPRAIAIECIQAASLIHDDYVD 88 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 + +RR + A V G + +VL+GD + + A ++E +++ +A T+A G + Sbjct: 89 EDIIRRKRPATWTVEGPRRAVLLGDVIFATAIQSMVELGNEDGATVARAIA-TVANGAYQ 147 Query: 147 QLSLSKNLDVTEED------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +LS +D E + Y +I KT LF AA ++ ++ G + ++G Sbjct: 148 ELSW--QMDGGEANLLEAGIYDRIIYLKTGALFGAACQLGAIATGAPQETSASAYAFGTR 205 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G A+Q+ DD+ D+ + ++ E + P LP + F Sbjct: 206 TGEAYQIADDLQDF----ITLWEHPQEGLKKLSPLLPALNYF 243 >gi|271964292|ref|YP_003338488.1| farnesyltranstransferase [Streptosporangium roseum DSM 43021] gi|270507467|gb|ACZ85745.1| putative farnesyltranstransferase [Streptosporangium roseum DSM 43021] Length = 355 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 83/303 (27%), Positives = 125/303 (41%), Gaps = 51/303 (16%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGKV 95 +GGKRLRP GD+ L A ++E + + L+HDDV+D S LRRG Sbjct: 45 FLAGGKRLRPAFCY-WGWRGAGGGDDPALFTAAASLELLQASALVHDDVMDASDLRRGMP 103 Query: 96 AA---------RLVW-------GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 AA + W G ++L+G+ +L E L SL A Sbjct: 104 AAHRRFQTLHEKAGWHGSAEQFGEGAAILLGNLML----IWSGEMWRGSGLPPASLAAAQ 159 Query: 140 LAEGELR-QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK--- 195 +R +L + LD+ E+ + F +AL V+ +G + SV Q L+ Sbjct: 160 QVHDHMRTELMCGQYLDLLEQAHGENT-------FDSALRVALFKSG-KYSVEQPLRLGL 211 Query: 196 ----------------SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 YG ++GIAFQL DD+L G+ E GK G+D R GK T+ + Sbjct: 212 VLAARGRAPWIDRLCEEYGRSVGIAFQLRDDILGVFGDPAETGKPAGDDLREGKRTMLIA 271 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + + + T+ D + + + I+ E ALV E +Y + A SL Sbjct: 272 RTLSVASPAQAEAVRGTLGDPALDAAGIDRLRQIIAETGALVACEEMIKNYLEDALTSLD 331 Query: 300 CLP 302 P Sbjct: 332 DAP 334 >gi|227548900|ref|ZP_03978949.1| geranylgeranyl pyrophosphate synthase [Corynebacterium lipophiloflavum DSM 44291] gi|227079028|gb|EEI16991.1| geranylgeranyl pyrophosphate synthase [Corynebacterium lipophiloflavum DSM 44291] Length = 380 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 29/240 (12%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRG-----DNHVLL--ACAIEFIHTATLLHDDVVD 86 ++ I GGKR+RP+ G D +L ++E I L+HDD++D Sbjct: 60 LRDFILGGGKRIRPLYAWTGFFGARAAGGVGSEDPEAVLRAVSSLELIQACALIHDDIID 119 Query: 87 DSALRRGK------VAARLV----------WGNQTSVLVGDFLLSQA-----FCMVIETK 125 S RRG V AR +G ++L+GDF L A + + E Sbjct: 120 ASDTRRGNPTVHRAVEARHSKDDLFGDSADYGRNEAILIGDFALIWAEDMWRYSGLSEAA 179 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIA 184 A E + + G+L ++L + + E +V + KTA L + + IA Sbjct: 180 LTRAAEPWRGMRTEVIGGQLLDIALEAAANESVEMANNVNRYKTAAYTIERPLHLGAAIA 239 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G +A + YG ++GIAFQL DD+L G+ GK G+D R GK T+ + A R Sbjct: 240 GAPADTIEAFRGYGRDIGIAFQLRDDLLGVFGDEAVTGKPAGDDLREGKRTVLLAAALNR 299 >gi|218460669|ref|ZP_03500760.1| farnesyltranstransferase protein [Rhizobium etli Kim 5] Length = 297 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 27/233 (11%) Query: 22 RICSDVEMIPDVVKYL-------IFSGGKRLRPMLTLATALMLEYRGDNHVLLA----CA 70 R D + P +L +F GG R+RP L L + + G+ H LA A Sbjct: 22 RAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVC---GEKHPELATRAAAA 78 Query: 71 IEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQ 127 IE +H A+L+HDD+ D++ALRRG+ ++G +VL GD L+ AF + ++ Sbjct: 79 IELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLAGDALIVMAFKYLSLQAALT 138 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLD----VTEEDYLHVIKSKTAVLFSAALEVSSLI 183 L + A G L ++++ V + Y H KT LF AA +L+ Sbjct: 139 PELGGRMIEVVAEAVGPSHGLIAGQSMEAMTHVAIDRYHHY---KTGSLFVAAATCGALV 195 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +G + G LG A+Q+ DD+ D G V +GK D + +P++ Sbjct: 196 SGADPA---PWSKVGELLGHAYQIADDIADTVGRVEVLGKLPAVDTQLNRPSI 245 >gi|255262547|ref|ZP_05341889.1| geranyltranstransferase [Thalassiobium sp. R2A62] gi|255104882|gb|EET47556.1| geranyltranstransferase [Thalassiobium sp. R2A62] Length = 281 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 16/248 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSA--LRRGKVA 96 GGK R L L + + + D V L A AIE IH +L+HDD+ LRRG+ Sbjct: 39 GGKMFRAFLVLEGSRL--HGVDEAVALDAAMAIECIHAYSLVHDDLPCMDDDDLRRGQPT 96 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLSL-SKNL 154 W T+VLVGD L S AF ++ A+ + L++ A T+ +G++ ++ + Sbjct: 97 VHKKWDEATAVLVGDNLQSLAFQLITGPGLGGAIAQRLAVDARTMVKGQMLDIAAETAAT 156 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +T + + + + KT L A L+AG + Y LG+AFQ+ DD+LD Sbjct: 157 PLTLDQIIELQQHKTGALIKWAAVAGPLMAGADIG---PMSRYADALGLAFQIADDLLDV 213 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF---WKSTINDGKISVENLKK-- 269 G+V +GK +G+D GK T +L +R + + T+N+ + L++ Sbjct: 214 EGDVATVGKAVGKDNNAGKATFVSLLGLDEAKRRATDLVQEAQDTLNEYGTEADVLREAA 273 Query: 270 AFIIMREN 277 AF++ R+ Sbjct: 274 AFVVSRKK 281 >gi|229583172|ref|YP_002841571.1| Polyprenyl synthetase [Sulfolobus islandicus Y.N.15.51] gi|228013888|gb|ACP49649.1| Polyprenyl synthetase [Sulfolobus islandicus Y.N.15.51] Length = 281 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 13/206 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D+ Y I GKR R L + + L + A AIE +H+A+L DD+VD R Sbjct: 32 DISTY-ILKDGKRFRGTLNMFFTVALGGDIKDSYGGALAIEILHSASLALDDIVDLDVTR 90 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG AA +++GN+ + + ++L+ A ++ + +AL + + G LR + Sbjct: 91 RGDKAAWVIYGNRKVIFITNYLIPTALRIIQTSYGDDALNTSIELWKDTSVGALRDM--- 147 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 DY+ I+ KT LF + +S+ + N+ +Q L G LGI +Q++DD Sbjct: 148 ----YDNNDYIRTIELKTGSLFKLSTVLSAYASKHYNTKQQML-DVGKYLGIIYQIIDDF 202 Query: 212 LDYRG----EVNEMGKNIGEDFRNGK 233 +DY+ E++ K + + +R GK Sbjct: 203 VDYKTKKLEEIDGSAKQLFKYYREGK 228 >gi|160947156|ref|ZP_02094323.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270] gi|158446290|gb|EDP23285.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270] Length = 282 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 12/211 (5%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L ++ +D + Y GGKR+R +L L + D + + A+E IH +L Sbjct: 19 LNKVYADNNEFEKMCAYSFSVGGKRIRAILLLEAFKICRDISDIAIDFSVALELIHNYSL 78 Query: 80 LHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEA 132 +HDD+ +DD RRG ++ +G +VLVGD LL+ A ++ + Q E A Sbjct: 79 VHDDLPEMDDDKFRRGVLSVYGKYGQSNAVLVGDELLNNANLIMFKAIKQLENIDEIKNA 138 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +S L + + + LD+ D + KT LF AA+ + + G Sbjct: 139 ISASEIILNSSGINGMVYGQFLDLENNVENLSDIEKINSLKTGELFKAAILAGAKLGGAS 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 ++ L+ Y NLG+ FQL DD+ DY +V Sbjct: 199 DNDLAHLEIYAKNLGLVFQLQDDLFDYDEDV 229 >gi|307103628|gb|EFN51886.1| hypothetical protein CHLNCDRAFT_49140 [Chlorella variabilis] Length = 312 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/299 (26%), Positives = 130/299 (43%), Gaps = 39/299 (13%) Query: 38 IFS-GGKRLRPMLTLATALM------LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 IFS GGKRLRP++ L A L + H LA E +HTA+L+HDDV+D+ + Sbjct: 37 IFSAGGKRLRPLIVLLVARATFPLTGLSDITERHRRLAEISEMLHTASLVHDDVLDECDV 96 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRGK ++G + +VL GDFL +Q+ + + E ++ +S V A+GE+ Q + Sbjct: 97 RRGKETVNSLYGTRVAVLAGDFLFAQSSWFLANLDNMEVIKLISQVIADFADGEISQAAS 156 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + + YL KTA L +A+ +++ + R +S + + Sbjct: 157 LFDAYIDLRRYLDKSFWKTASLIAASCRSAAVFSDCDTEARPPNRSCSLPPRLPPPRRVA 216 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV------ 264 + + G+ P +L + + DG + + Sbjct: 217 LPAHLA---------------GRCPWPPLL---------RRVQDEMVGDGLLQLIQGRFK 252 Query: 265 --ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +L++A ++ + A G A SL CLPD+ K+SL +VD L+RL Sbjct: 253 EEGSLQRALELVSLGGGIDKARTLAREQGDLALASLACLPDTPAKRSLELMVDLVLERL 311 >gi|240171992|ref|ZP_04750651.1| polyprenyl synthase [Mycobacterium kansasii ATCC 12478] Length = 385 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 110/252 (43%), Gaps = 31/252 (12%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD----NHVLLACAIEFIHTATLLHDDVVDDS 88 + ++++ + GKR+R L LA + + LACAIE H ++L+HDD+ D S Sbjct: 92 IYRHVLATPGKRIRAGLGLACFRLQPSAATVSPAEAIDLACAIEMFHESSLIHDDICDGS 151 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQA--------------FCMVIETKSQEALEALS 134 LRRG + +G + + G L A F V E + L+ LS Sbjct: 152 LLRRGARSVPAAFGVRIAARAGFHLAGTALQILARVVADNPAVFARVGEDPAITYLDQLS 211 Query: 135 LVACTLAEGELRQLSLSKNLD--VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L+ G+L + +L +D V Y V +KT LF A GV + Sbjct: 212 ----ELSFGQLIE-TLPPAIDDSVLRRHYERVAGAKTGTLFRLACSYGGTAGGVDADGLR 266 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRGTKREK 250 AL Y L +AFQ++DDV D G + +GK D PT PVI LA + G+ + Sbjct: 267 ALMRYADQLALAFQIMDDVCDVEGGPS-LGKKSCGDLDRRVPTWPVIEWLAMRPGS---R 322 Query: 251 NFWKSTINDGKI 262 W S + + Sbjct: 323 ELWLSELTPSGV 334 >gi|238060277|ref|ZP_04604986.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149] gi|237882088|gb|EEP70916.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149] Length = 360 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 84/323 (26%), Positives = 132/323 (40%), Gaps = 66/323 (20%) Query: 11 DMEKVNFLILKRI---CSDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRG---- 61 D FL +R D ++P + ++ + GGKRLRP +RG Sbjct: 20 DKALAGFLAGQRTWLTAVDTALVPVAEAIEAFVLGGGKRLRPAFA-----YWGFRGAGGA 74 Query: 62 --DNHVLLACAIEFIHTATLLHDDVVDDSALRRG------KVAAR----------LVWGN 103 D V A+EF+ + L+HDD++D S RRG + AAR +G+ Sbjct: 75 DADQVVTALAALEFVQASALIHDDLMDRSDTRRGEPAVHRRFAARHRGAGWGGDADGFGD 134 Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163 ++L+GD C+V S E L + L +A R + +VT YL Sbjct: 135 AAAILLGDL------CLVW---SDELLHSAGLDPRVVARA--RPVFDEMRTEVTVGQYLD 183 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNS--------------------VRQALKSYGMNLGI 203 V+ T ++E + +A +++ VR A +YG+ LG Sbjct: 184 VLTQATG---DTSVERAGKVARYKSAKYTVERPLLLGAALADAPAHVRAAYSAYGLPLGE 240 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQL DDVL G+ + GK G+D R GK T V A + + + D ++ Sbjct: 241 AFQLRDDVLGVFGDPAQTGKPAGDDLREGKRTYLVAAAVEASDDAGRALLLDRLGDPELD 300 Query: 264 VENLKKAFIIMRENRALVDTEYR 286 + + + ++ AL TE R Sbjct: 301 ADGVARLRELITSTGALARTEER 323 >gi|256375538|ref|YP_003099198.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827] gi|255919841|gb|ACU35352.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827] Length = 356 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 28/261 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTL----ATALMLEYRGDNHVLLA-CAIEFIHTATLLHDDVVD 86 D + + SGGKR+RP A + VL A ++E I L+HDD++D Sbjct: 41 DGLTDFVLSGGKRVRPTFAWWGWRAAGGDPDQESAGRVLTAVSSLELIQACALIHDDLMD 100 Query: 87 DSALRRGKVAARL---------VW-------GNQTSVLVGDFLLSQAFCMVIETK-SQEA 129 S RRG+ + W G +VL+GD L+ A M+ +A Sbjct: 101 ASETRRGRPTIHVQFARRHRENSWLSSPEQFGLAAAVLIGDVALAWADDMLFAAGLPTDA 160 Query: 130 LEALSL----VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIA 184 L+ LSL + + G+ + D + + L + + KTA L + + I Sbjct: 161 LQRLSLPWRDMRTEMLAGQYLDVLTQARGDASADAALRIDRLKTAAYTVERPLHMGAAIG 220 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G + + L+++G ++G+AFQL DD+L G+ GK G+D R GK TL V L + Sbjct: 221 GGSAELIEGLRAFGRDIGVAFQLRDDLLGVFGDPAVTGKPAGDDLREGKRTLLVALGVEH 280 Query: 245 GTKR-EKNFWKSTINDGKISV 264 G E + + D ++ V Sbjct: 281 GADALEGALGRPDLGDAEVDV 301 >gi|307324885|ref|ZP_07604090.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306889383|gb|EFN20364.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 355 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 90/194 (46%), Gaps = 22/194 (11%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT-------------SVL 108 D V A ++E +H A ++HDD++DDS LR G+ A + ++L Sbjct: 76 DALVRAAASMELVHAAAVVHDDLIDDSPLRHGRPTAHIALRAAVRRRPRAVAAARSLAML 135 Query: 109 VGDFLLSQAFCMVIETKSQEALEA-----LSLVACTLAEGE-LRQLSLSKNLDVTEEDYL 162 VGD L+S A M + A A SL+A L GE L L + D T L Sbjct: 136 VGDLLMSLAGQMFATSGLPAAYLARARPLWSLLARELIAGECLEILRTGADPDTTAS--L 193 Query: 163 HVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 VI+ KTA L + +AG +R+ +YG+ LG AFQL DD+L G+ Sbjct: 194 KVIRYKTAKYTVEQPLLIGGALAGAGQRLREGYSAYGLPLGEAFQLRDDLLGLFGDPERT 253 Query: 222 GKNIGEDFRNGKPT 235 GK +D R +PT Sbjct: 254 GKANADDVRGHRPT 267 >gi|307297796|ref|ZP_07577602.1| Polyprenyl synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306917056|gb|EFN47438.1| Polyprenyl synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 279 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 15/219 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 DVV Y +GGKRLR L + + +N + A+E H+ +L+HDD+ +D+ Sbjct: 29 DVVSYTPLAGGKRLRAYLIWELSRYTGFGEENALKAGIAVELFHSGSLIHDDLPAIDNDT 88 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLL---SQAFCMV-IETKS-QEALEALSLVACTLAEGE 144 +RRG ++ + +G ++L GDFL+ + F + +ET+ LE + + EGE Sbjct: 89 IRRGLPSSHIKFGESKAILAGDFLMLFPGRVFSSLDLETRYIHPILELWQETSLKVVEGE 148 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + D + E + +KT LF + I + + + K G+ G Sbjct: 149 FDDVFPE---DESREQMERIHAAKTGALFGFCF-AAPFIREKREKIDEMYK-LGVRFGKL 203 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +Q++DD+ D +E+GK G+D + K T IL+F+ Sbjct: 204 YQMMDDIKDVISTESELGKTPGKDGKQNKLT---ILSFE 239 >gi|229583716|ref|YP_002842217.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.27] gi|228018765|gb|ACP54172.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.27] Length = 281 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 13/206 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D+ Y I GKR R L + + L + A AIE +H+A+L DD+VD R Sbjct: 32 DISTY-ILKDGKRFRGTLNMFFTVALGGDIKDSYGGALAIEILHSASLALDDIVDLDVTR 90 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG AA +++GN+ + + ++L+ A ++ + +AL + + G LR + Sbjct: 91 RGDKAAWVIYGNRKVIFITNYLIPTALRIIQTSYGDDALNTSIELWKDTSVGALRDM--- 147 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 DY+ I+ KT LF + +S+ + N+ +Q L G LGI +Q++DD Sbjct: 148 ----YDNNDYIRTIELKTGSLFKLSTVLSAYASKHYNTKQQML-DVGKYLGIIYQVIDDF 202 Query: 212 LDYRG----EVNEMGKNIGEDFRNGK 233 +DY+ E++ K + + +R GK Sbjct: 203 VDYKTKKLEEIDGSAKQLFKYYREGK 228 >gi|163735452|ref|ZP_02142885.1| geranylgeranyl pyrophosphate synthetase [Roseobacter litoralis Och 149] gi|161391265|gb|EDQ15601.1| geranylgeranyl pyrophosphate synthetase [Roseobacter litoralis Och 149] Length = 294 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 16/234 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--D 86 + Y GG R+RP + + A+ GD+ L A A+E IH A+L+HDD+ D Sbjct: 31 ALGYATAPGGARIRPTILTSVAMAC---GDDQPKLTDAAAAALELIHCASLVHDDLPCFD 87 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE--GE 144 D+ +RRGK + + +VL GD L+ AF ++ +S A + ++ + L++ G Sbjct: 88 DADMRRGKPSVHKAYSEPLAVLAGDSLIVLAF-EILARESGLAPDRVAQMILILSQRTGM 146 Query: 145 LRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + + E D ++KT LF AA ++ ++ AG Q++ + G +G Sbjct: 147 PGGICAGQGWESEAEIDLSAYHQAKTGALFIAATQMGAVAAG-QDA--EPWFELGARIGE 203 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 AFQ+ DD+ D + +GK G+D +G+P +L Q R K+ I Sbjct: 204 AFQVADDLRDALYDAETLGKPAGQDDLHGRPNAVTLLGVQGAISRLKDILGGAI 257 >gi|227826552|ref|YP_002828331.1| polyprenyl synthetase [Sulfolobus islandicus M.14.25] gi|227829194|ref|YP_002830973.1| Polyprenyl synthetase [Sulfolobus islandicus L.S.2.15] gi|229577963|ref|YP_002836361.1| Polyprenyl synthetase [Sulfolobus islandicus Y.G.57.14] gi|238618638|ref|YP_002913463.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.4] gi|284996549|ref|YP_003418316.1| Polyprenyl synthetase [Sulfolobus islandicus L.D.8.5] gi|227455641|gb|ACP34328.1| Polyprenyl synthetase [Sulfolobus islandicus L.S.2.15] gi|227458347|gb|ACP37033.1| Polyprenyl synthetase [Sulfolobus islandicus M.14.25] gi|228008677|gb|ACP44439.1| Polyprenyl synthetase [Sulfolobus islandicus Y.G.57.14] gi|238379707|gb|ACR40795.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.4] gi|284444444|gb|ADB85946.1| Polyprenyl synthetase [Sulfolobus islandicus L.D.8.5] gi|323473631|gb|ADX84237.1| polyprenyl synthetase [Sulfolobus islandicus REY15A] gi|323476280|gb|ADX81518.1| Polyprenyl synthetase [Sulfolobus islandicus HVE10/4] Length = 281 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 13/206 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D+ Y I GKR R L + + L + A AIE +H+A+L DD+VD R Sbjct: 32 DISTY-ILKDGKRFRGTLNMFFTVALGGDIKDSYGGALAIEILHSASLALDDIVDLDVTR 90 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG AA +++GN+ + + ++L+ A ++ + +AL + + G LR + Sbjct: 91 RGDKAAWVIYGNRKVIFITNYLIPTALRIIQTSYGDDALNTSIELWKDTSVGALRDM--- 147 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 DY+ I+ KT LF + +S+ + N+ +Q L G LGI +Q++DD Sbjct: 148 ----YDNNDYIRTIELKTGSLFKLSTVLSAYASKHYNTKQQML-DVGKYLGIIYQVIDDF 202 Query: 212 LDYRG----EVNEMGKNIGEDFRNGK 233 +DY+ E++ K + + +R GK Sbjct: 203 VDYKTKKLEEIDGSAKQLFKYYREGK 228 >gi|271965184|ref|YP_003339380.1| geranylgeranyl pyrophosphate synthase-like protein [Streptosporangium roseum DSM 43021] gi|270508359|gb|ACZ86637.1| Geranylgeranyl pyrophosphate synthase-like protein [Streptosporangium roseum DSM 43021] Length = 350 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 101/214 (47%), Gaps = 11/214 (5%) Query: 40 SGGKRLRPMLTLATALMLEYRGDN------HVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK +RP L LA+A G++ V A A+E +H +LLHDD++D RR Sbjct: 66 GGGKAVRPALVLASAWAAG--GEDAETVRAAVPAAVAVELVHDFSLLHDDIMDGDLTRRH 123 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 + AA V+G ++L GD LL+ A ++ + L L C+ G+ L+ Sbjct: 124 RPAAWSVFGVGEAILAGDVLLTLALDLLAGSPGLRVLTGSLLRLCS---GQSADLAFETR 180 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 DVT + + KT L A E+ +L G +G +LG+AFQL DD+L Sbjct: 181 TDVTLAQCVEMAAGKTGALLGCACEIGALAGGAGQDRAGLFGRFGHHLGLAFQLTDDLLG 240 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 G+ GK + D K +LPV+ A GT Sbjct: 241 IWGDPAVTGKPVFSDLAARKKSLPVVAALTSGTP 274 >gi|319949926|ref|ZP_08023925.1| putative polyprenyl synthase [Dietzia cinnamea P4] gi|319436405|gb|EFV91526.1| putative polyprenyl synthase [Dietzia cinnamea P4] Length = 359 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 82/313 (26%), Positives = 132/313 (42%), Gaps = 41/313 (13%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD-----NHVLLACA-IE 72 ++ I V+ + ++ + GGKR+RP LA R D V+ ACA +E Sbjct: 30 VVAAIDERVDRLAGLLSDFVLDGGKRMRPRFALAG--WAASRPDAGPAPEEVVTACAALE 87 Query: 73 FIHTATLLHDDVVDDSALRRGKV------------------AARLVWGNQTSVLVGDFLL 114 I L+HDD+VD S RRG+ AAR +G ++LVGD L Sbjct: 88 LIQACALVHDDIVDASDTRRGRPTVHRAIESAHRRDGWDGDAAR--YGVSQAILVGDLAL 145 Query: 115 SQAFCMVIETKSQEA-----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169 S A M + + A L + + G++ + + E+ V + KT Sbjct: 146 SWADEMFVTSGVDPAALGRALGPWHAMKTEVLSGQMLDILAEASGATDEQTPARVNRFKT 205 Query: 170 AV-LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 A L + + +AG + AL+ +G+ +G AFQL DD+L G+ GK G+D Sbjct: 206 AAYTVERPLHIGAELAGATDETVAALREFGVAVGQAFQLRDDLLGVFGDPEVTGKPSGDD 265 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEY 285 R GK TL + A + F + DG L++A ++ ++ A+ E Sbjct: 266 LREGKRTLLLARAMTLAPGEDARFLAGVLGTEPDGP----TLERARAVLVDSGAVASVET 321 Query: 286 RAYSYGQKAKDSL 298 +A D++ Sbjct: 322 EIEELTARALDAI 334 >gi|183219510|ref|YP_001837506.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909652|ref|YP_001961207.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774328|gb|ABZ92629.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777932|gb|ABZ96230.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 307 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 20/243 (8%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTL-----ATALMLEYRGDNH---VLLACAIEF 73 ++ S I + Y + +GGKR+RP+ + L D H L A A+E Sbjct: 26 KLFSPKTRITEACLYSLHAGGKRVRPIFVINSFFEPNDLFSSEPFDTHQSVFLAALAVEC 85 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----- 126 IHT +L+HDD+ +D+ RRGK + T++L GD L S +F ++ + Sbjct: 86 IHTYSLIHDDLPAMDNDDTRRGKPTCHKQFDEATAILAGDTLNSLSFQLLSMMDANDPNL 145 Query: 127 -QEALEALSLVA--CTLAEGELRQLSLSKNL--DVTEEDYLHVIKSKTAVLFSAALEVSS 181 +++++ L A + G++ + KN + E + + KT L +++ + + Sbjct: 146 LRDSIQILHQGAGMTGMILGQMEDIEEEKNPSSNARESKLESIHEKKTGALITSSFLLGN 205 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + L Y +G+ FQ+ DD+LD G + E+GK G+D + GK T P + Sbjct: 206 RLRADWKEREFVLTRYAKEIGLLFQITDDILDVEGNLAELGKTPGKDAKAGKLTYPSLYG 265 Query: 242 FQR 244 ++ Sbjct: 266 LEK 268 >gi|239918588|ref|YP_002958146.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] gi|281415197|ref|ZP_06246939.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] gi|239839795|gb|ACS31592.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] Length = 358 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/234 (33%), Positives = 109/234 (46%), Gaps = 33/234 (14%) Query: 36 YLIFSGGKRLRPMLT-----LATALMLEYRGDNHV-LLACAIEFIHTATLLHDDVVDDSA 89 ++ GK +RP L LATA + G V L A E +HTA L+HDDV+D Sbjct: 44 HVHVGAGKLIRPRLVELGWRLATADPVPPSGRAAVDRLGAAFELLHTALLVHDDVIDRDV 103 Query: 90 LRRGKVA----------ARLV-------WGNQTSVLVGDFLLSQAF-----CMVIETKSQ 127 LRRG+ A AR V G +++ GD LL+QAF C ++ Sbjct: 104 LRRGQPAVHASARHRLEARGVPAADAAHAGVAVALIAGDVLLTQAFRLAATCAADTARAA 163 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEED----YLHVIKSKTA-VLFSAALEVSSL 182 EA + A A GEL + L + EE L + + KTA A L +L Sbjct: 164 EAAAVVFDAAAVTAAGELEDVLLGLSRHTGEEPDPDRILAMQRLKTAHYTVGAPLRAGAL 223 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +AG + +A+ G +LG A+Q++DDVL G+ E GK+ D R GK T+ Sbjct: 224 LAGADPDLARAMGEAGADLGAAYQVIDDVLGVFGDPGETGKSADGDLREGKATV 277 >gi|145591919|ref|YP_001153921.1| polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514] gi|145283687|gb|ABP51269.1| Polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 263 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 115/224 (51%), Gaps = 24/224 (10%) Query: 20 LKRICSDV---------EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLA 68 L+R+ +D+ E + D +Y I GK LRP+L L + L+ R D VL A Sbjct: 12 LERVVADLQEVGRDIKPESLRDAARYYIEKPGKMLRPILLLTFSYSLDRRSLMDPRVLQA 71 Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 I E +H +LL DDV+D RRG R+++G++ +VL D+L++++ ++ + Sbjct: 72 ATIVELLHIVSLLQDDVMDKHDERRGAKTPRVIYGDERTVLASDWLIAESIKRAVKL-GE 130 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 E +E L+ VA ++LS+ + LD+ E + + KTA L A L + +L+ + Sbjct: 131 EVVEYLADVA--------QRLSMGQALDL-EGEREKAAELKTAPLIEATLVLPALLLK-R 180 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 V + K G +LG+ +Q DD+ D GE + + + +N Sbjct: 181 RDVLELAKRLGASLGVLYQYSDDLSD-EGERRDKTAEVTAEVKN 223 >gi|329295597|ref|ZP_08252933.1| Polyprenyl synthetase [Plautia stali symbiont] Length = 259 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 18/227 (7%) Query: 42 GKRLRPMLTLATA--LMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAA 97 GKR+RP+L L A + + + LACA+E +H A+L+ DD+ +D++ +RRG+ A Sbjct: 9 GKRIRPLLLLLAARDMGCDVAQQGILDLACAVEMVHAASLILDDIPSMDNARMRRGRPAI 68 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVI------ETKSQEALEALSLVAC--TLAEGELRQLS 149 +G ++L LLS+AF ++ T EA+ LS L +G+ + L Sbjct: 69 HCEYGENVAILAAVALLSRAFEVIALAPGLPATHKAEAIAELSSAVGLQGLVQGQFQDLH 128 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + E L + KT+VLF A L+++++ A VRQ L + +LG AFQL+D Sbjct: 129 DGAHSRSPEAITL-TNELKTSVLFRATLQMAAIAADASVQVRQRLSYFAQDLGQAFQLLD 187 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 D+ D GK+ +D GK TL +L + +R ++ S Sbjct: 188 DLAD---GSKHTGKDCHQD--QGKSTLVQMLGPEGAERRLRDHLSSA 229 >gi|34499409|ref|NP_903624.1| bifunctional short chain isoprenyl diphosphate [Chromobacterium violaceum ATCC 12472] gi|34105261|gb|AAQ61616.1| Bifunctional short chain isoprenyl diphosphate [Chromobacterium violaceum ATCC 12472] Length = 338 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 10/213 (4%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK LRP L + E ++ E IH A+L+ DDV DDS LRRG A Sbjct: 46 GKMLRPFLVCSVMQAFERDPRRTPVVVAIAEIIHAASLVLDDVADDSPLRRGGPTAHRQV 105 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA-EGELRQLSLS--------K 152 G + + G L+ F ++ S E +A +A E + + + Sbjct: 106 GVRVAGAAGSAWLNACFQLLAADDSGLEPEQAQRLADEIAWEHWVTGVGTTIDTTWPWMG 165 Query: 153 NLDVTEEDYLH-VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 LD T YL V+ T+ + L++ ++ AG + G LGIAFQ++DD+ Sbjct: 166 RLDGTPAQYLQSVVHRSTSYTYRLPLKLGAIAAGASPQQTAQFAALGEELGIAFQIIDDI 225 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ + ++ GK + ED GK L V+LA +R Sbjct: 226 LNVQPGDDKWGKALAEDITQGKINLQVLLALER 258 >gi|88811177|ref|ZP_01126433.1| Polyprenyl synthetase [Nitrococcus mobilis Nb-231] gi|88791716|gb|EAR22827.1| Polyprenyl synthetase [Nitrococcus mobilis Nb-231] Length = 328 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 9/189 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V+Y+I + GKR+R L L + + + A AIE I A+L+HDD VD+ +RR Sbjct: 36 TVQYII-NNGKRIRGCLVCLVNHALGGQIADALPRAVAIECIQAASLIHDDYVDNDTIRR 94 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE------LR 146 + A V G + +VL+GD + + A ++E + + + +A T+A G L Sbjct: 95 KRPATWTVEGPRRAVLLGDMMFATAIQSMVELSNADGIAVTRAIA-TVANGAYQEPLLLA 153 Query: 147 QLSLSKNLDVTEED-YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + + + LD+ E+ Y +I KT LF AA ++ ++ AG ++G G A+ Sbjct: 154 KPAAGRALDLNEQTIYERIIYLKTGALFGAACQLGAIAAGAPEERCAHAYAFGARTGEAY 213 Query: 206 QLVDDVLDY 214 Q+ DD++++ Sbjct: 214 QIADDLVEF 222 >gi|84496184|ref|ZP_00995038.1| putative polyprenyl synthase / dimethylallyltranstransferase [Janibacter sp. HTCC2649] gi|84382952|gb|EAP98833.1| putative polyprenyl synthase / dimethylallyltranstransferase [Janibacter sp. HTCC2649] Length = 366 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/251 (31%), Positives = 108/251 (43%), Gaps = 50/251 (19%) Query: 28 EMIPDVVKYL-----IFSGGKRLRPMLTLATALMLEYRG------DNHVLLACAIEFIHT 76 E+ PDV L + +GGKRLR A L +R D V LA A+EF Sbjct: 36 ELGPDVTDLLDRVGSLLAGGKRLR-----AAFLYWGHRAAGRADSDELVRLATAMEFFQA 90 Query: 77 ATLLHDDVVDDSALRRGKVAARLV---------WGNQTSVL-VGDFLLSQAFCMVIETKS 126 A L+HDDV+DDS RRG AA WG + V +L+ C+ T + Sbjct: 91 AALIHDDVMDDSDTRRGMPAAHRALAAVHTERGWGGDDARFGVAGAILAGNLCL---TWT 147 Query: 127 QEALEALSLVACTLAEGEL------RQLSLSKNLDVTE--------------EDYLHVIK 166 E + L LA G + QL + LDV + E VI+ Sbjct: 148 DELVATSGLGVEDLARGRVVFDRMRTQLMAGQFLDVVDSVRPWDGLPASERIERAQRVIR 207 Query: 167 SKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 K+A L + + G+ + L SYG++LG AFQL DD+L G+ GK Sbjct: 208 YKSAKYTVEHPLLIGATAGGLGEADLAHLSSYGLDLGHAFQLRDDLLGVFGDPEATGKPA 267 Query: 226 GEDFRNGKPTL 236 G+D R GK T+ Sbjct: 268 GDDLREGKRTV 278 >gi|237809244|ref|YP_002893684.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187] gi|237501505|gb|ACQ94098.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187] Length = 296 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 29/267 (10%) Query: 13 EKVNFLILKRICSDVEMIPDV-------VKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 ++++ L+L++I E +PD+ +++ + GGKR+RP L AT ML+ + Sbjct: 12 QRIDDLLLQKI----ETLPDLSPRLKAAMRHGLVLGGKRVRPFLVYATGSMLDI---DEA 64 Query: 66 LL---ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 LL A AIE IH +L+HDD+ LRRG + T+VL GD L + AF + Sbjct: 65 LLDGPAAAIECIHAYSLIHDDLPAMDDDDLRRGHPTVHKAFDEATAVLAGDALQTLAFSI 124 Query: 121 VIETKSQEALEALSL-VACTLAEGE-LRQLSLSKNLDVTEE------DYLHVI-KSKTAV 171 + + +AL + + TLA+ + + LD+ E + L +I + KT Sbjct: 125 LADHPFPDALRTQQVKMLSTLAQASGYAGMCGGQALDLAAEGQHVGLEALELIHRHKTGA 184 Query: 172 LFSAALEVSSLIA-GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L A+ + +L V ALK Y +G+AFQ+ DD+LD + +GK G D Sbjct: 185 LIECAVMLGALCQQDVAAETVSALKKYAAAIGLAFQVQDDILDVVSDTETLGKPQGSDQA 244 Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTI 257 K T P +L + ++ + + Sbjct: 245 LDKSTYPALLGLDAAREMAQDLHRQAL 271 >gi|72536073|gb|AAZ73139.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium DC416] Length = 301 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 18/230 (7%) Query: 39 FSGGKRLRPMLTLATA--LMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGK 94 + GKR+RP+L L A + + + LACA+E +H A+L+ DD+ +D++ +RRG+ Sbjct: 48 LAPGKRIRPLLLLLAARDMGCDVAQQGILDLACAVEMVHAASLILDDIPSMDNARMRRGR 107 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVI------ETKSQEALEALSLVAC--TLAEGELR 146 A +G ++L LLS+AF ++ T EA+ LS L +G+ + Sbjct: 108 PAIHCEYGENVAILAAVALLSRAFEVIALAPGLPATHKAEAIAELSSAVGLQGLVQGQFQ 167 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 L + E L + KT+VLF A L+++++ A VRQ L + +LG AFQ Sbjct: 168 DLHDGAHSRSPEAITL-TNELKTSVLFRATLQMAAIAADASVQVRQRLSYFAQDLGQAFQ 226 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 L+DD+ D GK+ +D GK TL +L + +R ++ S Sbjct: 227 LLDDLADGS---KHTGKDCHQD--QGKSTLVQMLGPEGAERRLRDHLSSA 271 >gi|312867098|ref|ZP_07727308.1| geranyltranstransferase [Streptococcus parasanguinis F0405] gi|311097227|gb|EFQ55461.1| geranyltranstransferase [Streptococcus parasanguinis F0405] Length = 291 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 110/227 (48%), Gaps = 25/227 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 V Y I +GGKRLRP+L L + H +A A+E IHT +L+HDD+ +D+ Sbjct: 31 VLYSIQAGGKRLRPLLLLELLEAFGLELTEAHFQVAGALEMIHTGSLIHDDLPAMDNDDY 90 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET------------KSQEALEALSLVAC 138 RRG++ +G ++L GD L F M+ + + +A + +VA Sbjct: 91 RRGQLTNHKKFGEDLAILAGDALFLDPFGMIAASALPDVVKVSLILELSDASGSRGMVAG 150 Query: 139 TL--AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + EGE +QL+L+ E +H +KT L + + LI +Q + Q LK Sbjct: 151 QVLDMEGEHKQLTLA------ELQTIHA--NKTGRLLAYPFIAAGLILELQADIAQLLKK 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G LG+AFQ+ DD+LD + +GK +D K T P +L + Sbjct: 203 IGKKLGLAFQVRDDILDLVADFEALGKTPQKDLVAEKSTYPALLGLE 249 >gi|119383153|ref|YP_914209.1| polyprenyl synthetase [Paracoccus denitrificans PD1222] gi|119372920|gb|ABL68513.1| farnesyl-diphosphate synthase [Paracoccus denitrificans PD1222] Length = 287 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 119/264 (45%), Gaps = 22/264 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + D ++Y GGKR+R L + +A + R + +A A+E +H +L+HDD+ Sbjct: 28 LTDAMRYACI-GGKRIRAFLVMESARLFGLRDRESLPVAAAVEALHAYSLVHDDLPSMDD 86 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRG + W T++L GD L S AF ++ + + L+LV+ R Sbjct: 87 DDLRRGLPTVHVRWSEATAILAGDALQSLAFGLLTDAQIGAPEIRLALVSGFSEAVGGRG 146 Query: 148 LSLSKNLDVTEEDYLHVI---------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + LD+ E + + ++KT L + +++AG L Y Sbjct: 147 MVWGQALDIAAETAVEPLDLMAIKRLQQAKTGALIQFSATAGAVMAGQDTG---PLAEYA 203 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST-- 256 NLG+AFQ+ DDVLD G + GK G+D K T +L + + + ++ Sbjct: 204 RNLGLAFQIHDDVLDVTGNEADTGKRTGKDGAANKATFVSLLGLEGARDKARTLVRNAET 263 Query: 257 ----INDGKISVENLKKAFIIMRE 276 +G ++ L + F+I R+ Sbjct: 264 ALEPYGEGAGNLRQLAR-FVIERD 286 >gi|309812865|ref|ZP_07706597.1| polyprenyl synthetase [Dermacoccus sp. Ellin185] gi|308433143|gb|EFP57043.1| polyprenyl synthetase [Dermacoccus sp. Ellin185] Length = 364 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 94/325 (28%), Positives = 138/325 (42%), Gaps = 60/325 (18%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACA--IE 72 +L + +++ D V L+ GGKR+R A+ L YR D+ L+ CA +E Sbjct: 28 VLAPLGGQTDLMLDAVATLL-RGGKRVR-----ASFLYWGYRAAGGADSDALVRCAASME 81 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLV----------------WGNQTSVLVGDFLLSQ 116 A LLHDDV+D S RRG AA +G ++L GD L+ Sbjct: 82 LFQAAALLHDDVMDASDTRRGMPAAHRAMAAAHRSRGLDGDADRFGEAGAILAGDLCLTW 141 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGEL------RQLSLSKNLDVTE------------ 158 A M + L A +A G QL + LDV E Sbjct: 142 ADEMYATS---------GLPADEVARGRAVFDLMRTQLMGGQFLDVLEASTPWATMGTPE 192 Query: 159 --EDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 E L VI+ K+A L + + AG V QAL YG+ LG A+QL DD+L Sbjct: 193 RIERALRVIRFKSAKYTMEHPLLIGAASAGASPHVTQALSQYGLALGEAYQLRDDLLGVF 252 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVI-LAFQRGTKRE-KNFWKSTINDGKISVENLKKAFII 273 G+ + GK G+D R GK T+ V L G + E F+ + + +++ ++ Sbjct: 253 GDPAQTGKPAGDDLREGKRTVLVAHLLDAAGDEPEVGTFFAERFGHDDLREDEVERIRVL 312 Query: 274 MRENRALVDTEYRAYSYGQKAKDSL 298 RE+ A+ E R Q+A+ +L Sbjct: 313 ARESGAVDAVEARIAEGAQRARAAL 337 >gi|110835026|ref|YP_693885.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis SK2] gi|110648137|emb|CAL17613.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis SK2] Length = 302 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 14/240 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S + ++Y SGGKR+RP+L A + + A A+E IH +L+HDD+ Sbjct: 35 SAASRLSHAMRYAALSGGKRIRPLLVYGAAQLAGAPLAKADVPAVAVELIHAYSLVHDDL 94 Query: 85 VDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA--CT- 139 LRRG+ + T++L GD L ++AF ++ +SL+ C Sbjct: 95 PAMDDDDLRRGQPTCHKAFDEATAILAGDTLHTRAFELLACHGDYRDGSRISLIQHLCQA 154 Query: 140 -----LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQ 192 +A G+++ L+ + V + +H +K T L +A+L++ +A + S+ Sbjct: 155 AGVDGMAAGQMQDMLAQGQQQTVAALEEMHYLK--TGRLITASLQLGYFVAEKDDPSLLA 212 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L +G +G+AFQ+ DD+LD ++GK G D + K T P +L ++ +R + Sbjct: 213 NLTEFGDAIGLAFQIQDDILDVTAATEQLGKPSGSDEKLQKSTFPSLLGLEQSQQRARQL 272 >gi|76802911|ref|YP_331006.1| multifunctional short/ long-chain (E)-prenyl diphosphate synthase [Natronomonas pharaonis DSM 2160] gi|76558776|emb|CAI50369.1| probable multifunctional short/ long-chain (E)-prenyl diphosphate synthase [Natronomonas pharaonis DSM 2160] Length = 353 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/310 (28%), Positives = 133/310 (42%), Gaps = 26/310 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + D V L+ GGKR R +L L L+ D ++ A E +H T++ DDV D + Sbjct: 49 LSDPVWELLDRGGKRWRAVLFLLLVEALDDDPDAYLEYAAIPEILHNGTIIVDDVEDGAT 108 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS-LVACTLAEGELRQL 148 RRG A G ++ G+ + + I T + L+A + L A + EL + Sbjct: 109 HRRGDPALHHTHGTDIALNAGNAMYF--LPLKIITHNPADLDADTRLAAYEMLMYELNRT 166 Query: 149 SLSKNL----------DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN--SVRQALKS 196 L + + D+TE+ YL + KT L A V+ L A V N + L + Sbjct: 167 HLGQGMDIHWHNQQEIDITEDQYLEMCACKTGCL---ARIVARLAAIVTNNEAAESDLAA 223 Query: 197 YGMNLGIAFQLVDDVLDYR---GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 Y + IAFQ+ DDVLD E + GK +G D R GK TL I A + + Sbjct: 224 YAEEMAIAFQIADDVLDVEYALEEGGDFGKGVGNDIREGKKTLLTIHAARNASPEAAARL 283 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK---DSLRCLPDSSWKKSL 310 +S + + + E + +A I+ ++ A AK D L PD K L Sbjct: 284 ESILWAAENTDEEVAEAIEILESTGSVEYARETAEELSTSAKAHLDDLGLQPDPEAK--L 341 Query: 311 MEVVDFCLQR 320 DF ++R Sbjct: 342 RGFADFVVER 351 >gi|328884962|emb|CCA58201.1| Octaprenyl-diphosphate synthase or Dimethylallyltransferase or Geranyltranstransferase (farnesyldiphosphate synthase) or Geranylgeranyl pyrophosphate synthetase [Streptomyces venezuelae ATCC 10712] Length = 349 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 5/177 (2%) Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 H TLLHDD+VD+ RR + A V+G +++ GD + + A M+ E + A + Sbjct: 97 HNFTLLHDDIVDEDVTRRHRATAWTVFGVPDALIAGDAMSALALRMLAEDPHPASAAASA 156 Query: 135 LVACTLAE---GELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +A + E G+ + + +V+ ++ L + +KT L A+ + +L AG Sbjct: 157 RLAACIIELCAGQQADCAFEQRGPREVSLDECLAMATAKTGALLGASCAIGALYAGAGEE 216 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 A+ ++G G+AFQL+DD++ G+ + GK G D K +LPV+ A GT Sbjct: 217 EVAAMDAFGREAGLAFQLIDDLIGIWGDPDRTGKPAGADLVAHKKSLPVVAALASGT 273 >gi|261822523|ref|YP_003260629.1| geranyltranstransferase [Pectobacterium wasabiae WPP163] gi|261606536|gb|ACX89022.1| Polyprenyl synthetase [Pectobacterium wasabiae WPP163] Length = 303 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 16/240 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L T + ++ A A+E IH +L+HDD+ Sbjct: 35 NAMEYGSLLGGKRLRPFLVYTTGELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG+ + +G ++L GD L + AF ++ + + + L++++ + Sbjct: 95 LRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPQVSDRDRLAMLSELAHASGVAG 154 Query: 148 LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS---Y 197 + ++ D+ E + + + KT L AA+ + + AG ++ R AL Y Sbjct: 155 MCGGQSFDLEAEGHQVDLVALERIHRHKTGALIRAAVRLGAFAAG--DAGRAALPHLDRY 212 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ GK G D + GK T P +L K+ + ++ ++ Sbjct: 213 ANAIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLLGLDNARKKAQELYQESL 272 >gi|160880644|ref|YP_001559612.1| polyprenyl synthetase [Clostridium phytofermentans ISDg] gi|160429310|gb|ABX42873.1| Polyprenyl synthetase [Clostridium phytofermentans ISDg] Length = 335 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 48/285 (16%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRG------------------------DN 63 I D + Y + +GGKR+RP++ L T AL + +G D Sbjct: 36 IFDALSYSLLAGGKRIRPIILLETYQALKEQEKGGALRASQLDIINENADFSWFKTLDDI 95 Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + A+E IHT +L+HDD+ +D+ RRGK+ +G +L GD LL+ AF +V Sbjct: 96 VTKFSVALEMIHTYSLVHDDLPAMDNDEYRRGKLTTHAKYGEDMGILAGDALLNGAFELV 155 Query: 122 IETKSQEALEALSLVACTLAEGELR--QLSLSKN----------LDV-------TEEDYL 162 E + S A TL + R Q+ S++ +DV ++E+ L Sbjct: 156 AEAFANIKDIENSTDAITLYDRVSRAYQMLSSRSGMYGMIGGQVVDVERTGSVLSKEELL 215 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 + + KT L A+ + ++++G +G+AFQ+ DD+LD + +G Sbjct: 216 FIYELKTGALLEASFLIGAILSGANQEELIRFTKIAKKVGLAFQIQDDILDVTSTMEVLG 275 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK-ISVEN 266 K I D +N K T + + K + K + + K + +EN Sbjct: 276 KPINSDEKNQKTTYVTLYGIEDSKKEVERLSKEAMEELKALKLEN 320 >gi|149923736|ref|ZP_01912130.1| geranylgeranyl pyrophosphate synthetase [Plesiocystis pacifica SIR-1] gi|149815420|gb|EDM74960.1| geranylgeranyl pyrophosphate synthetase [Plesiocystis pacifica SIR-1] Length = 262 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 14/204 (6%) Query: 62 DNHVLLACAIEFIHTATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 D +A A+E +H A+L+HDD+ DD+ LRRG+ + +G + +VL GD L+ A+ Sbjct: 14 DAQADVAAAMELMHCASLVHDDLPCFDDAPLRRGRPSVHAAFGEELAVLAGDGLIILAYE 73 Query: 120 MVIETKSQEA-----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 ++ ET + + +S Q S+ V + Y ++KT LF Sbjct: 74 VIAETNLPPSAVPKLIRCISRGVGAGGGLVAGQAWESER-SVGLQTYH---QAKTGALFE 129 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A +++AG + ++ +G +LG A+Q+ DD+ D G+ E+GK +G+D + +P Sbjct: 130 AGARAGAILAG---APQEPWAKFGAHLGEAYQVADDLRDALGDARELGKPVGQDIAHNRP 186 Query: 235 TLPVILAFQRGTKREKNFWKSTIN 258 + L R + I+ Sbjct: 187 NACISLGVDGAVNRLRALLDRAID 210 >gi|290955089|ref|YP_003486271.1| polyprenyl synthatase [Streptomyces scabiei 87.22] gi|260644615|emb|CBG67700.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22] Length = 345 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 98/223 (43%), Gaps = 14/223 (6%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 SGGK +R L + A ++ V A A+E +H +LLHDD++D RR + Sbjct: 61 SGGKGVRQALAVLGAEVVGAPARAGVPAAVAVELVHVFSLLHDDIMDGDVERRRRPTVWK 120 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELRQL-----S 149 +G +VL GD L F + +ET AL LS L G+ L Sbjct: 121 AYGTGPAVLAGDAL----FALAVETLATAEPGASALRTLSAALGELVRGQADDLLFAARP 176 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + V +Y + + KT L A + +L+ G + AL G LG+AFQ+VD Sbjct: 177 WAGPERVRPAEYRAMAERKTGALLGCAAALGALLGGGPPAAVAALDRAGRRLGLAFQIVD 236 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 DVL G+ GK + D R K T PV+ A G+ + Sbjct: 237 DVLGIWGDPEITGKPVHGDLRERKKTFPVLAALDAGSPEARRL 279 >gi|240139478|ref|YP_002963953.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens AM1] gi|240009450|gb|ACS40676.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens AM1] Length = 288 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 16/240 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA----CAIEFIHTATLLHDD 83 ++ + ++Y +F GG R+RP L LA AL GD+ + AIE +H A+L+HDD Sbjct: 25 PLLAEAIRYAVFPGGHRIRPRLCLAVALAC---GDDDPATSEAAAAAIELLHCASLVHDD 81 Query: 84 VV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + DD+ +RR K + +G +VL GD L+ AF + ++ LV +A Sbjct: 82 LPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAFETLARGVTRSPTRLAGLVG-LIA 140 Query: 142 EGELRQLSLSKNLDVTEEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + E Y+ ++ ++KT LF+AA + AG + L G Sbjct: 141 RAAGSPAGIVAGQAWESEPYVDLVEYQQAKTGALFAAATVAGAAAAGAPPLPWRLL---G 197 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 LG A+Q+ DD+ D E+GK G D G+P +L +R K+ + I+ Sbjct: 198 ECLGAAYQVADDLRDVACRQEEIGKPAGRDATLGRPNAAALLGMGGALERLKHLTQEAID 257 >gi|134100861|ref|YP_001106522.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291003525|ref|ZP_06561498.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133913484|emb|CAM03597.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 337 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/285 (29%), Positives = 141/285 (49%), Gaps = 4/285 (1%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGK LRP L L +A + G V A A+E +H +LLHDD++D RR + A Sbjct: 51 GGGKALRPALVLLSAQAVAPNGAQAVPAAAAVELVHNFSLLHDDLLDGDTSRRHRPTAWT 110 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLVACTLAEGELRQLSLSKNLDV 156 V+G ++L GD LL A +++++ S +A+ AL +L G+ L DV Sbjct: 111 VFGRPAALLAGDALLGLATEVLLDSTSGDAIASARALCAAVRSLIAGQNADLDFEHRADV 170 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 T ++ LH+ KT+ L + + + +L G + L ++G LG+AFQLVDD+L G Sbjct: 171 TLDECLHMADEKTSALLACSTSIGALHVGAPRETVERLHAFGSELGMAFQLVDDLLGLWG 230 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + GK + D R K T+P++ A GT+ + + + ++ L++A ++R Sbjct: 231 DPEVTGKPVLSDLRARKKTVPIVHALTSGTEAGRRLGELYGKEEPLTEAELREAADMVRR 290 Query: 277 NRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320 + T+ A L R ++ +SL E+ +F ++R Sbjct: 291 AGSQQWTQDECERRLAAAHQHLPRATGNAEAIESLTELAEFIVRR 335 >gi|89052580|ref|YP_508031.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1] gi|88862129|gb|ABD53006.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1] Length = 288 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 17/253 (6%) Query: 9 LKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L+D + L R +D+ + I ++Y GGKRLR L L +A + + + Sbjct: 6 LRDAQTRIGDFLTRQLADLGDDTIAQGMRYAT-GGGKRLRGFLALESAALFDVPPGQALY 64 Query: 67 LACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 A A+E +H +L+HDD+ LRRG+ W + T+VLVGD L + AF ++ Sbjct: 65 AAGAVECLHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDDATAVLVGDALQTFAFELISRE 124 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI---------KSKTAVLFSA 175 + A E ++L A + + L + D+ E + +KT L Sbjct: 125 DAGTAEERVALTASLAKASGAQGMVLGQAQDIAAETAGRALTLQEITGLQANKTGRLIEW 184 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +++ G + L+ Y +G+AFQ+ DD+LD G+ + GK + +D GK T Sbjct: 185 PAHAGAVLGGADPA---PLQRYARAIGLAFQIADDILDVEGDAAKAGKALRKDADAGKAT 241 Query: 236 LPVILAFQRGTKR 248 +L + R Sbjct: 242 FVSLLGMEAAKAR 254 >gi|197121567|ref|YP_002133518.1| polyprenyl synthetase [Anaeromyxobacter sp. K] gi|196171416|gb|ACG72389.1| Polyprenyl synthetase [Anaeromyxobacter sp. K] Length = 293 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 113/216 (52%), Gaps = 18/216 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH------VLLACAIEFIHTATLLHDDVV 85 + ++Y + GGKR+RP L LA E G + + A A+E IHT +L+HDD+ Sbjct: 39 EAMRYALLGGGKRMRPALVLAA---CEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLP 95 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV---ACTL 140 LRRG+ + T+VLVGD L S AF ++ + A L+ A + Sbjct: 96 AMDDDDLRRGRPTVHKAYDEPTAVLVGDGLQSLAFAHLLASPDPAAAPLARLLAENAQLM 155 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 EG+ R ++ ++ + E + + ++++KT L +AA+ + AGV +A+ G+ Sbjct: 156 VEGQARDMA-GEHARLGEAEVMELMRTKTGALLAAAVAGGARCAGVPV---EAVYPVGLK 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 LG+AFQ+ DD+LD + +GK G+D GK TL Sbjct: 212 LGLAFQIADDLLDLTADAATLGKRAGKDAAAGKSTL 247 >gi|328954813|ref|YP_004372146.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase [Coriobacterium glomerans PW2] gi|328455137|gb|AEB06331.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Coriobacterium glomerans PW2] Length = 363 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 78/296 (26%), Positives = 139/296 (46%), Gaps = 19/296 (6%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGKR RP++ + A + + +A AIE +A L+HDD+ D RRG + Sbjct: 74 NGGKRHRPLICMLAARAVGGDAAAALDVATAIEHFQSAALIHDDIADRGNTRRGAPCLHV 133 Query: 100 VWGNQTSVLVGDFLLSQAFCMVI-------ETKSQEALEALSLVACTLAEGELRQLSLSK 152 G ++ GD L V+ E K + E + + T+ EG+ L ++ Sbjct: 134 TEGEGIAINCGDLELISMTAAVLDDANLGDELKIRLLRELVEMTRRTI-EGQALDLGWAR 192 Query: 153 N--LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLVD 209 + D+T EDYL + KTA A IAG V+ + L+S+G+ G+AFQ+ D Sbjct: 193 DARYDLTVEDYLDMATRKTAWYSGAVPLACGAIAGGGCEVQVEGLRSFGLACGLAFQIQD 252 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTINDGKISVENL 267 D+++ + ++ GK++ D GK TL + A ++ + +S D + L Sbjct: 253 DLINLQ-PLDGGGKDVRSDITQGKRTLICVHALLDDAYHDELVDILESASTDPAV----L 307 Query: 268 KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322 ++A I R+ ++ RA AK +L + D+ ++ + + DF ++R++ Sbjct: 308 ERAVEIFRQTNSIAFASERAVELIAHAKRALAGIELDAECRRLFISMADFFIERVS 363 >gi|5912297|emb|CAB56064.1| geranylgeranyl pyrophosphate synthase [Paracoccus marcusii] Length = 291 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 14/206 (6%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 S GKR R ML L A D V ACA+E +H A+L+ DD+ +DD+ LRRG+ A Sbjct: 38 LSSGKRFRGMLMLLAAEASGGVCDTIVDAACAVEMVHAASLIFDDLPCMDDAGLRRGQPA 97 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--------LEALSLVACTLAEGELRQL 148 + G +VL G L+++A ++ + + + SL L G+ L Sbjct: 98 THVAHGESRAVLGGIALITEAMALLAGARGASGTVRAQLVRILSRSLGPQGLCAGQDLDL 157 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 +KN E++ KT VLF A LE+ ++I + + +G LG FQ Sbjct: 158 HAAKNGAGVEQEQ----DLKTGVLFIAGLEMLAVIKEFDAEEQTQMIDFGRQLGRVFQSY 213 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKP 234 DD+L+ G+ +GK+ G D P Sbjct: 214 DDLLEVVGDQAALGKDTGRDAAAPGP 239 >gi|296269323|ref|YP_003651955.1| polyprenyl synthetase [Thermobispora bispora DSM 43833] gi|296092110|gb|ADG88062.1| Polyprenyl synthetase [Thermobispora bispora DSM 43833] Length = 358 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 48/302 (15%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGKV 95 SGGKRLRP D+ L A ++E + + L+HDDV+D S +RRG Sbjct: 46 FLSGGKRLRPAFCYWGWRAAGGGSDDARLYNAAASLELLQASALIHDDVMDASDVRRGMP 105 Query: 96 AAR----------------LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 +A +G +VL+G+ LL A M S EAL+ VA Sbjct: 106 SAHRRFERMHLESRWHGSAAQFGENAAVLLGNLLLVWAGEMW--RTSGLPAEALA-VAQP 162 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK---- 195 + + L +L + LD+ E+ ++ F +AL V+ +G + SV Q L+ Sbjct: 163 VHDHMLTELMCGQYLDLLEQ-------AQGEGTFDSALRVALYKSG-KYSVEQPLRLGLL 214 Query: 196 ---------------SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 YG +GIAFQL DD+L G+ E GK G+D R GK T+ + Sbjct: 215 LAAQSRLPWIDTLCAQYGQRVGIAFQLRDDILGVFGDPAETGKPAGDDLREGKRTMLIAR 274 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + T + + + + + E + I+ E AL E Y +A +L+ Sbjct: 275 TLAQATPEQAEVVRKLLGNPDLDAEGVATLRTIIEETGALAACEEMIKRYLDEALHALQE 334 Query: 301 LP 302 P Sbjct: 335 AP 336 >gi|121613596|ref|YP_001001287.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176] gi|167006181|ref|ZP_02271939.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176] gi|87249601|gb|EAQ72560.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176] Length = 281 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 25/286 (8%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L++L + +EK L ++ S + + ++ +GGK R L L+ + N Sbjct: 3 LKELFIHHLEKN----LPKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLN 58 Query: 64 HVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 L +A A+EFIHT +L+HDD+ +D++ RRG + T++LVGD L ++AF + Sbjct: 59 QALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLV 118 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAV 171 + ++ ++ + L+ L + + + +D ED +LH KTA Sbjct: 119 LSHAHLKDEIK-IKLIKTLAFNAGLNGMVIGQAIDCFFEDKKLSLNELEFLHT--HKTAR 175 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L +AAL++ I + N + G+ LG+ FQ+ DD++D + GK D Sbjct: 176 LIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDIH- 234 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 K + +L ++ K ++N D +E L K M +N Sbjct: 235 -KNSFVNLLGLEQAIKTKENLLSECEQD----LEKLNKKLAQMIQN 275 >gi|159045835|ref|YP_001534629.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12] gi|157913595|gb|ABV95028.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12] Length = 291 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 15/212 (7%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGKRLR +L L TA + + V A AIE +H +L+HDD+ LRRG+ Sbjct: 41 GGKRLRGVLVLETAWLHGVAPERAVYAAAAIECLHAYSLVHDDLPAMDDDDLRRGQPTVH 100 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 + W +++LVGD L + AF + + + + + AL+LV + L + LD+ Sbjct: 101 VKWDEASAILVGDALQTLAFEALSDPRMTDDPAVALALVRSLAQASGAAGMVLGQALDIA 160 Query: 158 EE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 E + + KT L + E +L+A + L+ Y +G+AFQ+ Sbjct: 161 AETAAAPLSLDEITRLQAGKTGALIRWSAEAGALLARADPA---PLRRYAEAIGLAFQIA 217 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 DD+LD G+ + GK + +D GK T +L Sbjct: 218 DDILDVTGDAEKAGKRLQKDAEAGKATFVSLL 249 >gi|322389034|ref|ZP_08062602.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 903] gi|321144257|gb|EFX39667.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 903] Length = 291 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 25/227 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 V Y I +GGKRLRP+L L + H +A A+E IHT +L+HDD+ +D+ Sbjct: 31 VLYSIQAGGKRLRPLLLLELLEAFGLELTEPHFQVAGALEMIHTGSLIHDDLPAMDNDDY 90 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE------------ALSLVAC 138 RRG++ +G ++L GD L F M+ + +A++ + +VA Sbjct: 91 RRGQLTNHKKFGEDLAILAGDALFLDPFGMIAASALPDAVKVSLIFELSDASGSRGMVAG 150 Query: 139 TL--AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + EGE +QL+L+ E +H +KT L + + LI +Q + Q L+ Sbjct: 151 QVLDMEGEHKQLTLA------ELQTIHA--NKTGRLLAYPFIAAGLILELQADIGQLLEK 202 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G LG+AFQ+ DD+LD + +GK +D K T P +L + Sbjct: 203 IGKKLGLAFQVRDDILDLVADFEVLGKTPQKDLVAEKSTYPALLGLE 249 >gi|294635305|ref|ZP_06713803.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685] gi|291091314|gb|EFE23875.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685] Length = 301 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 29/270 (10%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GGKRLRP L AT + A AIE IH +LLHDD+ L Sbjct: 36 AMRYGALLGGKRLRPYLVYATGRLFGCDLSALDAPAAAIECIHAYSLLHDDLPAMDDDDL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE-------- 142 RRG+ + +G ++L GD L + AF ++ ++ + L C L+E Sbjct: 96 RRGQPTCHIKFGEAHAILAGDALQTLAFTLLTDSPMPGVADRDRL--CMLSELAHASGVA 153 Query: 143 ----GELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKS 196 G+ L+ + +D+ + +H + KT L A+ + +L G ++ L Sbjct: 154 GMCGGQALDLAAEGQRVDLAALEQIH--RHKTGALIRCAVRLGALAGGNAGHAALTLLDR 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y +G+AFQ+ DD+LD G+ ++ GK G D + K T P +L + ++ + + Sbjct: 212 YANAIGLAFQVQDDILDVVGDSSKTGKRQGADQQLDKSTYPALLGLDQARQKAADLQQEA 271 Query: 257 I-------NDGKISVENLKK--AFIIMREN 277 + ++ + LK +FII R+N Sbjct: 272 LRALTELEQQHNLNTQALKSLASFIIERDN 301 >gi|218530905|ref|YP_002421721.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4] gi|218523208|gb|ACK83793.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4] Length = 288 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 16/240 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA----CAIEFIHTATLLHDD 83 ++ + ++Y +F GG R+RP L LA AL GD+ + AIE +H A+L+HDD Sbjct: 25 PLLAEAIRYAVFPGGHRIRPRLCLAVALAC---GDDDPATSEAAAAAIELLHCASLVHDD 81 Query: 84 VV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + DD+A+RR K + +G +VL GD L+ AF + + LV +A Sbjct: 82 LPCFDDAAMRRQKPSVHAAFGVPLAVLTGDALIVAAFETLARGVTCSPTRLAGLVG-LIA 140 Query: 142 EGELRQLSLSKNLDVTEEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + E Y+ ++ ++KT LF+AA + AG + L G Sbjct: 141 RAAGSPSGIVAGQAWESEPYVDLVEYQQAKTGALFAAATVAGAAAAGAPPLPWRLL---G 197 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 LG A+Q+ DD+ D E+GK G D G+P +L +R K+ + I+ Sbjct: 198 ECLGAAYQVADDLRDVACRQEEIGKPAGRDATLGRPNAAALLGMGGALERLKHLTQEAID 257 >gi|145294798|ref|YP_001137619.1| hypothetical protein cgR_0745 [Corynebacterium glutamicum R] gi|14517651|gb|AAK64296.1|AF159510_1 GGPP synthase [Corynebacterium glutamicum] gi|140844718|dbj|BAF53717.1| hypothetical protein [Corynebacterium glutamicum R] Length = 382 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 43/245 (17%) Query: 41 GGKRLRP--MLTLATALM---LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGK +RP +L L AL+ +E + + + +A A+E +H + L+HDDV+D RRGK+ Sbjct: 68 GGKLIRPRMLLGLYDALVDDDIEVKLNTVLQVAAALELLHFSLLVHDDVIDGDLYRRGKL 127 Query: 96 ---------------------AARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEA 132 L W +L+G+ L+ + ++ + + Sbjct: 128 NFIGQILIHRTPESFAQTQRDPEHLDWAQSNGLLMGNLFLAATHQIFARLDLPHPQRVRL 187 Query: 133 LSLVACTLAE---GE-----LRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLI 183 L L+ T+ + GE L ++S N+D+ L + + KTA F + ++++ Sbjct: 188 LDLLNHTMNDTIVGEFLDVGLSSKAISPNMDIA----LEMSRLKTATYSFELPMRAAAIL 243 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + + + G NLGIA+QL DD L G+ E GK+ D R GK T I+A+ Sbjct: 244 AELPQEIETQIGEIGTNLGIAYQLQDDYLSTFGDAAEHGKDAFSDLREGKET--TIIAYA 301 Query: 244 RGTKR 248 R T + Sbjct: 302 RNTAK 306 >gi|302549101|ref|ZP_07301443.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] gi|302466719|gb|EFL29812.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] Length = 350 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 6/209 (2%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGK +R L + A + V A A+E +HT +LLHDD++D A RR + A Sbjct: 68 PGGKGVRQALAVLGAEVAGAPARAGVAAAVAVELVHTFSLLHDDIMDGDADRRRRPAVWK 127 Query: 100 VWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL---- 154 +G +VL GD L + A + + EA+ LS L G+ L ++ Sbjct: 128 AYGTGPAVLAGDALFALAVETLAAQPGGAEAVRTLSAALGDLVRGQADDLLFTERPWTGP 187 Query: 155 -DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 V ++Y V + KT L A + + + G AL G +LGIAFQ+VDDVL Sbjct: 188 ERVRPDEYRAVAEHKTGALLGCAAALGAALGGAAPETVAALDRVGRHLGIAFQIVDDVLG 247 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G+ GK + D R K T PV++A Sbjct: 248 IWGDPRVTGKPVHGDLRERKKTFPVLVAL 276 >gi|222823159|ref|YP_002574732.1| geranyltranstransferase [Campylobacter lari RM2100] gi|222538380|gb|ACM63481.1| geranyltranstransferase [Campylobacter lari RM2100] Length = 282 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 25/216 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL------ACAIEFIHTATLLHDDV- 84 + +K+++ +GGK R L L N L A A+EFIHT +L+HDD+ Sbjct: 26 EALKWMLEAGGKHFRAQLLLGIV-----NTKNPALFEKALNAALALEFIHTYSLIHDDLP 80 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 +D+++LRRGK + T++LVGD L ++AF ++ + +E + L L+ Sbjct: 81 AMDNASLRRGKQTLHKKYDETTAILVGDALNTEAFLLLSKLDLKENIR-LKLIETLAFNA 139 Query: 144 ELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L + + + +D ED +LH+ KTA L +AAL++ I + + + Sbjct: 140 GLGGMIIGQAIDCYFEDIPLNLEQVEFLHI--HKTARLIAAALKMGCEICELDEKECEQI 197 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 G+ +G+ FQ+ DD++D + E GK D Sbjct: 198 YDIGLLIGLIFQIKDDIIDATLDTQEAGKPTHNDLH 233 >gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya] Length = 214 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 97/186 (52%), Gaps = 15/186 (8%) Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-------CMVI 122 E +HT +L+HDD+ +D+ LRRGK V+G +VL GD LLS +F V Sbjct: 1 EMMHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLAVATVGVD 60 Query: 123 ETKSQEALEALSLVACT--LAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALE 178 ++ A++ L+ T L G++ + DV E +++HV KTA L AA+ Sbjct: 61 PSRIVRAIKELAKSIGTEGLVAGQVVDICSEGMTDVGLEHLEFIHV--HKTAALLEAAVV 118 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + +++ G + + L+ + +G+ FQ+VDD+LD E+GK G+D K T P Sbjct: 119 LGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVAEKVTYPK 178 Query: 239 ILAFQR 244 ++ ++ Sbjct: 179 LMGIEK 184 >gi|297158616|gb|ADI08328.1| putative polyprenyl diphosphate synthase [Streptomyces bingchenggensis BCW-1] Length = 379 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 94/209 (44%), Gaps = 8/209 (3%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +R L + A G V A A+E IH +LLHDD++D RR + + + Sbjct: 83 GKGVRQALAVLGAEAAGAPGTTAVAGAVAVELIHAFSLLHDDIMDGDETRRRRASVWKAY 142 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAEGELRQL-----SLSKN 153 G +VL GD L + A + E+ A+ LS L G+ L + Sbjct: 143 GTGPAVLAGDALFALAVQTLAESPGPHGGAAIRQLSGALGDLVRGQAEDLLFESRPWTGP 202 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 V +Y + + KT L A + + +AG V AL G ++G+AFQ VDD+L Sbjct: 203 DAVRTAEYRAMAEGKTGALLGCAAALGAQLAGAPEPVVAALDRAGRHVGVAFQAVDDLLG 262 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G+ GK + D R K TLPV+ A Sbjct: 263 IWGDPRVTGKPVHGDLRRKKKTLPVLAAL 291 >gi|253687426|ref|YP_003016616.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754004|gb|ACT12080.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 303 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 111/238 (46%), Gaps = 12/238 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L T + ++ A A+E IH +L+HDD+ Sbjct: 35 NAMEYGSLLGGKRLRPFLVYTTGELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDD 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQ 147 LRRG+ + +G ++L GD L + AF ++ + + + L++++ + Sbjct: 95 LRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPQVSDRDRLAMISELAQASGVAG 154 Query: 148 LSLSKNLDVTEEDYL-------HVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSYGM 199 + + D+ E + + + KT L AA+ + +L +G + L Y Sbjct: 155 MCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGALASGETGRAALPHLDRYAN 214 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ GK G D + GK T P +L K+ + ++ ++ Sbjct: 215 AIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLLGLDNARKKAQELYQESL 272 >gi|328479791|gb|EGF48907.1| Geranyltranstransferase [Lactobacillus rhamnosus MTCC 5462] Length = 252 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 11/250 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKRLRP+L L+ M + + A A+EF+HT +L+HDD+ +D+ LRRG Sbjct: 3 YSVDAGGKRLRPLLLLSVVAMYDGVVAEALPAAAALEFVHTYSLIHDDLPAMDNDDLRRG 62 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGELRQLSLSK 152 + +G ++L GD LL+ AF ++ + ++ + ++A + G + L Sbjct: 63 QPTNHKQFGEALAILAGDALLTDAFAILSQHYPEKGAALVQILAEAAGSSGMVAGQVLDM 122 Query: 153 NLDVTEEDYL---HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + T+ D + ++KT L A + + SL + + + AL + G+ FQ+ D Sbjct: 123 DGEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAIPEADQAALADFAAAFGLGFQIKD 182 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR--EKNFWKST--INDGKISVE 265 D+ D E+GK +D K T P +L G K+ F ++T +N + Sbjct: 183 DINDVTKTTAELGKTADKDVAEHKNTFPELLGL-AGAKQALATQFQQATAALNSLTVDAA 241 Query: 266 NLKKAFIIMR 275 +LK +++ Sbjct: 242 DLKSILAVLQ 251 >gi|320006988|gb|ADW01838.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331] Length = 351 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 20/229 (8%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRG--------KVAAR-----LVWGNQTSVLVGD 111 V A ++E +H A ++HDD++DDS LR G + AAR + G ++LVGD Sbjct: 75 VRAAASMELVHAAAVVHDDLIDDSPLRHGLPTAHMALRGAARGRPRSVSAGRSLAMLVGD 134 Query: 112 FLLSQAFCMVIETKSQEALEA-----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166 L+ A + + A A S +A L GE ++ L D L VI+ Sbjct: 135 LLMGLAGQLFATSGLPAAYLARARPLWSALARDLIAGECLEI-LRTGAAPDTADSLKVIR 193 Query: 167 SKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA L + +AG VR +YG+ LG AFQL DD++ G + GK Sbjct: 194 YKTAKYTVEQPLLIGGALAGAGERVRSGYSAYGLPLGEAFQLRDDLVGLFGSPQDTGKAA 253 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274 +D R +PT + ++ E+ ++ + G + L+ A +M Sbjct: 254 TDDLRGNRPTALLAETWRVADDGERRQLRALLGRGDPGPDGLRAARELM 302 >gi|254416180|ref|ZP_05029935.1| polyprenyl synthetase family [Microcoleus chthonoplastes PCC 7420] gi|196177113|gb|EDX72122.1| polyprenyl synthetase family [Microcoleus chthonoplastes PCC 7420] Length = 452 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 16/214 (7%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 F GK LRP + ++ A + G + + A A+E H A L+HDD+ D+S RRGK Sbjct: 136 FRVGKMLRPTMCISVARAVGGMGHSALTAAAALELYHNAFLIHDDIEDESESRRGKGTLH 195 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIE-------TKSQEALEALSLVACTLAEGELRQLSL- 150 + G ++ VGD A +++E +K+ L + +A EG+ +L Sbjct: 196 QMIGIPRAINVGDATNVLAVGLLLENLSVLGVSKALNILHEIEFMARQSVEGQAMELDWV 255 Query: 151 -SKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQ------ALKSYGMNLG 202 + ++++DY + KT F + ++ +SV+ L +GM LG Sbjct: 256 ATNPSHLSDQDYFTMCVKKTCWYSFITPCRIGLIVGHPASSVQDLIEPLAGLTRFGMILG 315 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 IAFQ+ DD+L+ +GE+ GK IG D GK TL Sbjct: 316 IAFQIQDDLLNLQGEMESYGKEIGGDIYEGKRTL 349 >gi|163760025|ref|ZP_02167109.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43] gi|162282983|gb|EDQ33270.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43] Length = 305 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 10/214 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ + +GGKRLRP L + TA ML D + +A A+E IH +L+HDD+ L Sbjct: 46 AMRHGVLNGGKRLRPFLVIETARMLGAPEDAALRVAAALECIHCYSLVHDDLPAMDDDDL 105 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLAEGELRQLS 149 RRG+ + + T++L GD LL+ AF ++ ++ +A L LV + + Sbjct: 106 RRGQPTVHIAFDEATAILAGDALLTLAFDVISAPETDLPADARLRLVNALSRAAGVGGMV 165 Query: 150 LSKNLDVTEE----DYLHVIK---SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + LD+ E D ++K KT L A ++ AG +++ + +G +G Sbjct: 166 GGQALDLAAERVSPDEAGIVKLQAMKTGALLRFACAAGAIAAGCDDAIVARVTRFGEIIG 225 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +AFQL DD+LD + +GK G+D GK TL Sbjct: 226 LAFQLADDLLDVTSDAATLGKAAGKDAARGKGTL 259 >gi|254439146|ref|ZP_05052640.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] gi|198254592|gb|EDY78906.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] Length = 286 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 13/222 (5%) Query: 7 LTLKDME-KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +TL+D++ +++ L+L + + D +Y +GG R+R L L A L + Sbjct: 13 ITLRDVDAQIDRLLLP----NSSRVADAARYHFSAGGARVRARLGLDAAAALNLSPQASL 68 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A A E +H A+L+HDD+ D A+RRGK + +G ++ GD L+S A+ M I Sbjct: 69 ACAIAPELLHNASLVHDDLQDGDAMRRGKPSVWSRFGKDIAISTGDLLISAAY-MAIAAH 127 Query: 126 SQE--ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 AL A+ +G+ + ++ T E Y+++ +K+ L AL + + Sbjct: 128 PYPALALRAMHDAVLYTIDGQTQD---CRSTQPTPEAYVNIAANKSGPLL--ALPIRLAL 182 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 Q ++ + G L +A+Q +DD++D ++ + NI Sbjct: 183 IAAQAPGQETVVHAGRALAVAYQTLDDIMDRADDLAKGSTNI 224 >gi|111018119|ref|YP_701091.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1] gi|110817649|gb|ABG92933.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1] Length = 330 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 27/235 (11%) Query: 37 LIFSGGKRLRPML--TLATALMLEYRGDN--HVLLAC-AIEFIHTATLLHDDVVDDSALR 91 + GGKR+RP T + RG + VL AC A+E + L+HDD++D S R Sbjct: 15 FVLRGGKRVRPAFAWTGWVGAGGDARGPDAGPVLRACSALELVQACALVHDDIIDASTTR 74 Query: 92 RGKVAARL---------VW-------GNQTSVLVGDFLLSQAFCMVIETK-SQEALEALS 134 RG + W G ++L+GD L+ A M+ E+ + +A +S Sbjct: 75 RGFPTVHVEFAEQHRAGAWSGDSAHFGEGVAILLGDLALAWADDMIRESGITPDASARIS 134 Query: 135 LVACTLAE----GELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNS 189 V + G+ +S D + + V + KTA L + + +AG ++ Sbjct: 135 PVWSAMRTEVLGGQFLDISNEARADESIVAAMKVNRYKTAAYTIERPLHLGAALAGADDT 194 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + A + +G ++GIAFQL DD+L G+ GK G+D R GK T+ ++ QR Sbjct: 195 LVSAYRRFGTDIGIAFQLRDDLLGVFGDPAVTGKPSGDDLRAGKRTVLFAMSLQR 249 >gi|23308797|ref|NP_599861.2| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] gi|21323391|dbj|BAB98019.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] Length = 382 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 43/245 (17%) Query: 41 GGKRLRP--MLTLATALM---LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGK +RP +L L L+ +E + + + +A A+E +H + L+HDDV+D RRGK+ Sbjct: 68 GGKLIRPRMLLGLYNTLVDDDIEVKLNTVLQVAVALELLHFSLLVHDDVIDGDLYRRGKL 127 Query: 96 ---------------------AARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEA 132 L W +L+G+ L+ + ++ + + Sbjct: 128 NFIGQILMHRTPESFAQIQRDPEHLDWAQSNGLLMGNLFLAATHQIFARLDLPHHQRVRL 187 Query: 133 LSLVACTLAE---GE-----LRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLI 183 L L+ T+ + GE L ++S N+D+ L + + KTA F + ++++ Sbjct: 188 LDLLNHTINDTIVGEFLDVGLSSKAISPNMDIA----LEMSRLKTATYTFELPMRAAAIL 243 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + + + G NLGIA+QL DD L G+ E GK+ D R GK T I+AF Sbjct: 244 AELPQEIETKIGEIGTNLGIAYQLQDDYLSTFGDAAEHGKDAFSDLREGKET--TIIAFA 301 Query: 244 RGTKR 248 R T + Sbjct: 302 RDTAK 306 >gi|84043358|gb|ABC50110.1| geranylgeranyl pyrophosphate synthase [Brevundimonas vesicularis] Length = 298 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 12/197 (6%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARL 99 GKR+RP+L + A + ++ + ACA+E +H A+L+ DD+ +DD++LRRG+ Sbjct: 53 GKRVRPVLAMLAAAHVGGDPEDALEYACALEMVHAASLVLDDLPCMDDASLRRGQPTLHH 112 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLVACT-----LAEGELRQLSLSK 152 G T+VL LL+QA +V++T ++ L AL L+ L+EG++R L Sbjct: 113 RHGEDTAVLAAVALLNQATRLVLQTAAPAETRLAALDLLTQAIGFDGLSEGQMRDLRDDA 172 Query: 153 NLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 +E L I KT LF A + L+ G L +G +G AFQL DD+ Sbjct: 173 R--DRDESALRQINDLKTGALFVATVRGGGLLGGGDAQDLARLSIFGEAIGFAFQLCDDL 230 Query: 212 LDYRGEVNEMGKNIGED 228 LD V+ GK++G+D Sbjct: 231 LDVCSTVDAAGKDVGQD 247 >gi|242078453|ref|XP_002443995.1| hypothetical protein SORBIDRAFT_07g005530 [Sorghum bicolor] gi|241940345|gb|EES13490.1| hypothetical protein SORBIDRAFT_07g005530 [Sorghum bicolor] Length = 365 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 14/195 (7%) Query: 23 ICSDVEMIPDVVKYLIFSG--GKRLRP--MLTLATALMLEYRGD----------NHVLLA 68 + ++V + Y +G GKR P +L +A+A+ + H+ +A Sbjct: 81 VVAEVPELTSAAGYFFRAGAEGKRTCPTVLLLMASAISTDMSDPIVGSENKPRARHMRVA 140 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 E IH ++L+HDDV+D++ RRG + G + +VL GDFLL +AF + + E Sbjct: 141 EITEMIHISSLIHDDVLDNADTRRGMDSLNFTVGKKLAVLAGDFLLFRAFSAAVALDNTE 200 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + L+ L GEL QL+++ + + YL KTA L S + + ++++G Sbjct: 201 VVSLLATAVNNLVTGELMQLTITPAQRCSMDYYLQKTYYKTAALISNSCKAIAVLSGQTT 260 Query: 189 SVRQALKSYGMNLGI 203 V+ YG +LGI Sbjct: 261 EVQALAYQYGRHLGI 275 >gi|209965378|ref|YP_002298293.1| geranyltranstransferase [Rhodospirillum centenum SW] gi|209958844|gb|ACI99480.1| geranyltranstransferase [Rhodospirillum centenum SW] Length = 289 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 24/240 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV-- 85 + ++Y +F GG RLRP L +A A GD+ L A +IE +H A+L+HDD+ Sbjct: 29 EAMRYSVFPGGHRLRPRLCVAVARAC---GDDAPELTDAAAASIELLHCASLVHDDLPCF 85 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 DD+++RR K + +G +VL GD L+ AF ++ +Q + L+ Sbjct: 86 DDASIRRSKPSVHKAFGEPLAVLAGDGLIVLAFDLLARAAAQRPDRLIPLMGVVS----- 140 Query: 146 RQLSLSKNLDV-------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 R + + + E D ++KT LF+ A + AG + + L G Sbjct: 141 RSVGVPSGIIAGQAWECEPEADLSEYHRAKTGALFAGATMAGAAAAGADPTPWRFL---G 197 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 LG A+Q+ DD+ D + E+GK +G D G+ + L KR +S I+ Sbjct: 198 ERLGEAYQVADDLRDVAADPEEIGKPVGRDAALGRSSAVRELGIAGSLKRLDELAESAID 257 >gi|54026371|ref|YP_120613.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152] gi|54017879|dbj|BAD59249.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica IFM 10152] Length = 369 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/235 (31%), Positives = 106/235 (45%), Gaps = 25/235 (10%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGK LR L LA + G + A + E +H L+ DDV+D+SA RRG+ AA + Sbjct: 66 AGGKYLRSALHLAGWSTVAPVGAAAIRAAASAELLHCFALMQDDVMDESARRRGRPAAHV 125 Query: 100 ---VW-------------GNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVAC 138 W G + L D L A ++ E+ AL + Sbjct: 126 RFAQWHARQGFSGSSDRFGESAATLAADLCLVWAEQLLRESGVDAAALARALPRYDAMRS 185 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSY 197 LA G+ R L D L V ++K+ LE+ + +AG +V AL Y Sbjct: 186 ELAVGQFRDLVNDARRRPALADVLAVARAKSGHYTVRRPLELGAELAGAPPAVLAALGRY 245 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG---TKRE 249 G+ +G AFQ+ DD+L G+ GK +G D RNGK T V+LA + T+RE Sbjct: 246 GVAIGEAFQVRDDLLGVFGDPGATGKPVGADLRNGKATTVVVLAREYADGVTRRE 300 >gi|237785329|ref|YP_002906034.1| putative polyprenyl diphosphate synthase [Corynebacterium kroppenstedtii DSM 44385] gi|237758241|gb|ACR17491.1| putative polyprenyl diphosphate synthase [Corynebacterium kroppenstedtii DSM 44385] Length = 361 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 32/231 (13%) Query: 37 LIFSGGKRLRPM---------LTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVD 86 +GGKR+RP L L + E+ + V+ A ++E + + L+HDD++D Sbjct: 44 FTINGGKRIRPTFAWLGWMGSLQLTFSDAAEHPDADAVMHAASSLELLQSCALIHDDIID 103 Query: 87 DSALRRG---------KVAARLVW-------GNQTSVLVGDFLLSQAFCMVIET-----K 125 SA RRG + + W GN ++L+GD LS A M +E + Sbjct: 104 SSATRRGMPTVHEHFKQSHSAQAWHGRGESYGNAVAILIGDLALSWADDMFMEAALPPAQ 163 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIA 184 A + + + G++ ++ D + V + KTA L + + +A Sbjct: 164 RDRAWQPWQDMRTEVVCGQIMDVTAEAQGDGSLRTAERVNRYKTAAYTVERPLHIGAALA 223 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 G AL+++G ++G+AFQL DD L G+ GK G+D R GK T Sbjct: 224 GAPQDTVTALRTFGRDIGVAFQLRDDQLGVFGDPEVTGKPSGDDLREGKRT 274 >gi|313127585|ref|YP_004037855.1| farnesyl-diphosphate synthase [Halogeometricum borinquense DSM 11551] gi|312293950|gb|ADQ68410.1| farnesyl-diphosphate synthase [Halogeometricum borinquense DSM 11551] Length = 280 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D + D + ++ +GGKR+RP +T+ + D V A AIE +H A+L+ DD++ Sbjct: 23 DPPELSDELAHVALAGGKRVRPAVTILSCEACGGDADAAVDFAVAIELVHNASLVIDDII 82 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D S +RRG +A +G S++ D LL +AF ++ + A++ ++ L EGE Sbjct: 83 DRSDIRRGTPSAWAEYGYGPSIIASDGLLGEAFALL--SVDDHAMQIVAESMVELGEGEA 140 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 +L E +Y+ + + KT LF AA E+ ++ A +A Y +G+AF Sbjct: 141 TELVARPT---NEAEYMELARRKTGALFRAAAELGAVAADADPFTVEAFGEYAERVGVAF 197 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 Q+ DDVLD + +E+GK G+D + +P++ Sbjct: 198 QIRDDVLDATADADELGKPTGQDEQMDRPSV 228 >gi|325962936|ref|YP_004240842.1| geranylgeranyl pyrophosphate synthase [Arthrobacter phenanthrenivorans Sphe3] gi|323469023|gb|ADX72708.1| geranylgeranyl pyrophosphate synthase [Arthrobacter phenanthrenivorans Sphe3] Length = 364 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 151/347 (43%), Gaps = 57/347 (16%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-------VLLACAI 71 ++ I D+E + + L+ +GGKRLR ++ +RG V A+ Sbjct: 32 VMSAISPDIEPLMGSISNLV-TGGKRLRALMC-----YWGWRGAGGEPAAQQIVAAGAAL 85 Query: 72 EFIHTATLLHDDVVDDSALRRG--KVAARLV--------------WGNQTSVLVGDFLLS 115 E A L+HDD++D S RRG V R +G ++L GD LS Sbjct: 86 ELFQAAALIHDDIIDRSDTRRGGPSVHRRFTELHGSRGWALDSERFGQAAAILTGDLCLS 145 Query: 116 ---QAFCMVIETKSQEALEAL--SLVACTLAEGELRQLSLSKNLDVTEE------DYLHV 164 +AF + E + + L +L+ + G+ LD+ EE D Sbjct: 146 FSEEAFTDIGERAAAGSRARLIFNLMRAEVMAGQY--------LDILEEVAGPVRDRAGA 197 Query: 165 I-KSKTAVLFSAA-------LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + ++++ + F +A L + +AG + + + ++ + LG AFQL DDVL G Sbjct: 198 VSRAQSIIRFKSAKYSTEHPLALGGALAGASDELLRGYSAFALPLGEAFQLRDDVLGVFG 257 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + GK G+D R GK T+ V LA + + E F + + +S E++ + I+ E Sbjct: 258 DPLTTGKPAGDDLREGKRTVLVALALDQASPAESAFIDARLGSPDLSAEDIHELRRIIEE 317 Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRLN 322 + AL TE +G A +L LP D K +L + + + R + Sbjct: 318 SGALAATEVLINEFGAAAFVALEALPLDELPKTALRRLAEATVSRAS 364 >gi|196228124|ref|ZP_03126991.1| protein of unknown function DUF116 [Chthoniobacter flavus Ellin428] gi|196227527|gb|EDY22030.1| protein of unknown function DUF116 [Chthoniobacter flavus Ellin428] Length = 590 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 21/219 (9%) Query: 41 GGKRLRPMLTLATALMLEYRG-----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GKR RP LT+A L D+ +A A+E H A+L+HDD+ D+ A R G+ Sbjct: 271 AGKRWRPFLTVAAYQALRTTPGAPIPDDLRKVAVAVECFHKASLIHDDIEDNDAQRYGEP 330 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACT----LAEGELRQLSL 150 G ++ VGD L+ + + ++ S E A+ +A L G+ +L Sbjct: 331 TLHEEHGIAVALNVGDLLIGEGYRLLAACNASPEQKVAMLRIAAEGQRELCRGQGAELVW 390 Query: 151 SKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 ++ +T + L + + KTA F AL++ ++ AG + L++Y LGIA+Q+ D Sbjct: 391 ARQPQPLTSTEVLDIFRKKTAPAFGVALQLGTVYAGQLEEHEEVLQAYSEALGIAYQIRD 450 Query: 210 DVLDY--RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 D+ D GE N D +P+L + +AF+R Sbjct: 451 DLSDLGASGETN--------DIAGLRPSLLLAVAFERAN 481 >gi|199597161|ref|ZP_03210593.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus HN001] gi|258508675|ref|YP_003171426.1| geranyltranstransferase [Lactobacillus rhamnosus GG] gi|199591965|gb|EDZ00040.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus HN001] gi|257148602|emb|CAR87575.1| Geranyltranstransferase [Lactobacillus rhamnosus GG] gi|259649981|dbj|BAI42143.1| geranyltranstransferase [Lactobacillus rhamnosus GG] Length = 283 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 122/253 (48%), Gaps = 11/253 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y + +GGKRLRP+L L+ M + + A A+EF+HT +L+HDD+ +D+ L Sbjct: 31 AMAYSVDAGGKRLRPLLLLSVVAMYDGVVAEALPAAAALEFVHTYSLIHDDLPAMDNDDL 90 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGELRQLS 149 RRG+ +G ++L GD LL+ AF ++ + + E + ++A + G + Sbjct: 91 RRGQPTNHKQFGEALAILAGDALLTDAFAILSQHYPGKGAELVQILAEAAGSSGMVAGQV 150 Query: 150 LSKNLDVTEEDYL---HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 L + + T+ D + ++KT L A + + SL + + + AL + G+ FQ Sbjct: 151 LDMDGEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAIPEADQAALADFAAAFGLGFQ 210 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR----EKNFWKSTINDGKI 262 + DD+ D E+GK +D K T P +L G K+ + + +N + Sbjct: 211 IKDDINDVTKTTAELGKTADKDVAEHKNTFPELLGL-AGAKQALATQFQLATAALNSLTV 269 Query: 263 SVENLKKAFIIMR 275 +LK +++ Sbjct: 270 DAADLKSILAVLQ 282 >gi|282882106|ref|ZP_06290747.1| geranyltranstransferase [Peptoniphilus lacrimalis 315-B] gi|281298136|gb|EFA90591.1| geranyltranstransferase [Peptoniphilus lacrimalis 315-B] Length = 289 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 44/279 (15%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLACAIEFIHTATLLHDDVVDD 87 I + +KY +FSGGKR+RP+L + T L D + A +E IHT +L+HDD+ Sbjct: 32 IYESMKYSLFSGGKRIRPLLCMITYNELAENPTLDKILPFAATLEMIHTYSLIHDDLPAM 91 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE----------ALSL 135 LRR K V+ ++L GD LL+ + M + +K E+L+ AL Sbjct: 92 DDDDLRRDKPTNHKVYSEAVAILAGDGLLNMS--MEVISKYMESLDDIDELKKCIKALKF 149 Query: 136 VA-CTLAEG-------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + C+ G ++ L+ N ++ E+ Y KTA L A++ +++AG + Sbjct: 150 IYNCSGVLGMIGGQLLDIDYLNEQYNEELCEDMY----SLKTAALLKASIVTGAIMAGCE 205 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + LK +G +G+A+Q DD+LD + +D +NG+ T+ L F + Sbjct: 206 GEIITKLKEFGQYIGLAYQYKDDLLD-----------MNKDLKNGQKTM---LDFYSAEE 251 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEY 285 E N KS N G S+++++ I+++ AL+ EY Sbjct: 252 VE-NKIKSLTNKGLESIKDIEFKDDILKDFCLALIKREY 289 >gi|254451056|ref|ZP_05064493.1| polyprenyl synthetase [Octadecabacter antarcticus 238] gi|198265462|gb|EDY89732.1| polyprenyl synthetase [Octadecabacter antarcticus 238] Length = 286 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 10/199 (5%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + D +Y +GG R+R L L A L + A A E +H A+L+HDD+ D A Sbjct: 33 VADAARYHFSAGGARVRARLGLDAAATLNLSPQASLACAIAPELLHNASLVHDDLQDGDA 92 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL---VACTLAEGELR 146 +RRGK + +G ++ GD L+S A+ M I AL ++ V+ T+ +G+ + Sbjct: 93 MRRGKPSVWSRFGKNIAISTGDLLISAAY-MAIAVHPYPALALCAMHDAVSYTI-DGQTQ 150 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 ++ T E Y+++ +K+ L AL + + Q ++ + G L IA+Q Sbjct: 151 DC---RSTQPTPEAYVNIAANKSGPLL--ALPIRLALIAAQAPGQETVVHAGRALAIAYQ 205 Query: 207 LVDDVLDYRGEVNEMGKNI 225 +DD++D ++ + NI Sbjct: 206 TLDDIMDRADDLAKGSTNI 224 >gi|57753869|dbj|BAD86799.1| geranylgeranyl diphosphate synthase [Streptomyces sp. KO-3988] Length = 388 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 74/301 (24%), Positives = 130/301 (43%), Gaps = 24/301 (7%) Query: 25 SDVEMIPDVVKYL---IFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATL 79 +DV ++ ++++L + +GGKR+RP+L + G+ ++ A ++E H TL Sbjct: 68 TDVHLV-SLIEHLRDFLAAGGKRIRPLLCMVGWHAAGGYGETEPIIGAAASLELFHAFTL 126 Query: 80 LHDDVVDDSALRRGKVAARLV------------WGNQTSVLVGDFLL--SQAFCMVIETK 125 +HDDV+D S RRG+ +G +++L+GD ++ S Sbjct: 127 IHDDVMDASDTRRGRPTLHRTLETGANGTTAERFGTNSAILLGDLVMVWSDELLYSSGLD 186 Query: 126 SQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSS 181 Q+ + L+ E G+ R L + E L VI+ KTA L + + Sbjct: 187 QQQLVAVRPLLDAMRTEVMIGQYRDLLSTGQPTADVERSLAVIRYKTAKYTVERPLHIGA 246 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AG S+ +Y + +G AFQL DD+L G+ ++ GK+ +D R GK T + A Sbjct: 247 ALAGADQSLLDVCTAYALPIGEAFQLRDDLLGVFGDPSKTGKSTLDDLREGKATALMAHA 306 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + +S + D + + ++R A E Q+A+ L Sbjct: 307 LHTAGTEQARVLRSLVGDPDLDEAGAETVRGVLRATGAADKVEQMITDRVQRARRVLDEA 366 Query: 302 P 302 P Sbjct: 367 P 367 >gi|254781111|ref|YP_003065524.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040788|gb|ACT57584.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 237 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 100/190 (52%), Gaps = 11/190 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGK++R L A + + + AIE IH +L+HDD+ +D+ + Sbjct: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--EALEALSLVACTLAEGELRQL 148 RRGK + + T+++ G+ LL+ AF ++ K+Q + + + +++ T G L+ + Sbjct: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGM 159 Query: 149 SLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + LD+ +E + K KT L A E +++A + ++ L+ +G NLGI Sbjct: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 Query: 204 AFQLVDDVLD 213 FQL DD+LD Sbjct: 220 IFQLADDLLD 229 >gi|57238655|ref|YP_179786.1| geranyltranstransferase [Campylobacter jejuni RM1221] gi|57167459|gb|AAW36238.1| geranyltranstransferase [Campylobacter jejuni RM1221] gi|315059094|gb|ADT73423.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Campylobacter jejuni subsp. jejuni S3] Length = 281 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 135/286 (47%), Gaps = 25/286 (8%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L++L + +EK L ++ S + + ++ +GGK R L L+ + N Sbjct: 3 LKELFIHHLEKN----LPKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLN 58 Query: 64 HVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 L +A A+EFIHT +L+HDD+ +D++ RRG + T++LVGD L ++AF + Sbjct: 59 QALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLV 118 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAV 171 + ++ ++ + L+ L + + + +D ED +LH KTA Sbjct: 119 LSHAHLKDEIK-IKLIKTLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHT--HKTAR 175 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L +AAL++ I + N + G+ LG+ FQ+ DD++D + GK D Sbjct: 176 LIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDIH- 234 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMREN 277 K + +L ++ K ++N +N+ + +E L + M +N Sbjct: 235 -KNSFVNLLGLEQAIKTKENL----LNECEQDLEKLNEKLAQMIQN 275 >gi|148653898|ref|YP_001280991.1| polyprenyl synthetase [Psychrobacter sp. PRwf-1] gi|148572982|gb|ABQ95041.1| farnesyl-diphosphate synthase [Psychrobacter sp. PRwf-1] Length = 311 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 25/246 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALM------------LEYRGDNHVLLACAIEFIHTATL 79 + Y + GK++RP+L ++ L L DN A+EF+HT +L Sbjct: 38 EACHYAMTGQGKKVRPLLVASSYLTVLASSQAATIDTLPLFDDNCRRAMLAVEFLHTYSL 97 Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127 +HDD+ LRRG+ + +G T++L GD L + AF + K+ Sbjct: 98 IHDDLPCMDDDDLRRGRPTCHIKFGEATALLAGDVLQTLAFEALSADLPGFAPISNDKAA 157 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L + A + G++ L+ ++N V++ + + KT L AA+ + + A Sbjct: 158 SLLTLFAPRARRMVSGQMLDLN-AENKQVSQPQLEAIHRDKTGALIEAAVLMGAACADAN 216 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ QA+ S+ N+G+AFQ+ DD+LD + +GK G D K T ++ + T Sbjct: 217 DTQYQAITSFASNVGLAFQVQDDILDVTSSTDTLGKPTGSDEGLNKSTYVKLMGVEAATD 276 Query: 248 REKNFW 253 K+ + Sbjct: 277 YAKSLF 282 >gi|62389517|ref|YP_224919.1| geranylgeranyl-pyrophosphate sythase [Corynebacterium glutamicum ATCC 13032] gi|41324851|emb|CAF19333.1| geranylgeranyl-pyrophosphate sythase [Corynebacterium glutamicum ATCC 13032] Length = 372 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 43/245 (17%) Query: 41 GGKRLRP--MLTLATALM---LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGK +RP +L L L+ +E + + + +A A+E +H + L+HDDV+D RRGK+ Sbjct: 58 GGKLIRPRMLLGLYNTLVDDDIEVKLNTVLQVAVALELLHFSLLVHDDVIDGDLYRRGKL 117 Query: 96 ---------------------AARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEA 132 L W +L+G+ L+ + ++ + + Sbjct: 118 NFIGQILMHRTPESFAQIQRDPEHLDWAQSNGLLMGNLFLAATHQIFARLDLPHHQRVRL 177 Query: 133 LSLVACTLAE---GE-----LRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLI 183 L L+ T+ + GE L ++S N+D+ L + + KTA F + ++++ Sbjct: 178 LDLLNHTINDTIVGEFLDVGLSSKAISPNMDIA----LEMSRLKTATYTFELPMRAAAIL 233 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + + + G NLGIA+QL DD L G+ E GK+ D R GK T I+AF Sbjct: 234 AELPQEIETKIGEIGTNLGIAYQLQDDYLSTFGDAAEHGKDAFSDLREGKET--TIIAFA 291 Query: 244 RGTKR 248 R T + Sbjct: 292 RDTAK 296 >gi|238060507|ref|ZP_04605216.1| type I phosphodiesterase, nucleotide pyrophosphatase [Micromonospora sp. ATCC 39149] gi|237882318|gb|EEP71146.1| type I phosphodiesterase, nucleotide pyrophosphatase [Micromonospora sp. ATCC 39149] Length = 658 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 28/234 (11%) Query: 37 LIFSGGKRLRPMLTL----ATALMLEYRGDNHVLLA-CAIEFIHTATLLHDDVVDDSALR 91 + +GGKRLRP + +L+A A+E H L+HDD++D S R Sbjct: 346 FVLAGGKRLRPQFCYWGWRGAGGEDGGEDGSPILVASAALELFHAFALIHDDILDRSDRR 405 Query: 92 RGKVA---------ARLVW-------GNQTSVLVGDFLLSQAFCMVIET--KSQEALEAL 133 RG + AR W G T++L GD + A M E + E L Sbjct: 406 RGAPSVHRLFADLHARSAWRGDPEAYGRNTALLCGDLCAAWADQMFHECGLRRDELLRGY 465 Query: 134 SLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNS 189 ++ A E GE L +S D + L VI+ K A + L++ + +AG Sbjct: 466 AVFALMRTEVIAGEYLDL-VSGVGDGSVASALTVIRLKAARYTVTRPLQIGAALAGGPPE 524 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + AL +G LG AFQL DDVL G+ GK+I +D R GKPT+ + LA Q Sbjct: 525 LAAALAEFGDPLGDAFQLRDDVLGVFGDPQITGKSILDDLREGKPTVMMALARQ 578 >gi|330469543|ref|YP_004407286.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] gi|328812514|gb|AEB46686.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] Length = 355 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 34/233 (14%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNH------VLLACAIEFIHTATLLHDDVVDDSAL 90 + +GGKRLRP+ +R V A A+E H L+HDD++D S Sbjct: 47 FVLAGGKRLRPLF-----CYWGWRAAGGPDSTPIVTAAAALELFHAFALIHDDILDGSDR 101 Query: 91 RRGKVA---------ARLVW-------GNQTSVLVGDFLLS---QAF--CMVIETKSQEA 129 RRG+ + R W G T++L GD + Q F C + Sbjct: 102 RRGEPSVHRIFADLHTRSSWRGDPEAYGRNTALLCGDLCAAWSDQMFHECGLDAESVHRG 161 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQN 188 SL+ + GE L +S + L VI+ K A + L++ + +AG + Sbjct: 162 YAVFSLMRTEVIAGEYLDL-VSGVGGGSVASALTVIRMKAARYTVTRPLQIGATLAGASS 220 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + AL +G LG AFQL DDVL G+ GK+I +D R GKPT+ + LA Sbjct: 221 ELVDALAEFGDPLGDAFQLRDDVLGVFGDPAVTGKSILDDLREGKPTVMMALA 273 >gi|260425613|ref|ZP_05779593.1| geranyltranstransferase [Citreicella sp. SE45] gi|260423553|gb|EEX16803.1| geranyltranstransferase [Citreicella sp. SE45] Length = 289 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 73/254 (28%), Positives = 113/254 (44%), Gaps = 20/254 (7%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGK LR L L A + + ACAIE IH +L+HDD+ LRRG Sbjct: 39 GGKGLRGWLVLEGARLHGVPQAQALWPACAIEAIHAYSLVHDDLPCMDDDDLRRGLPTVH 98 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQLSLSKNLDVT 157 W T+VL GD L + F +V + + + + +LA R + L + LD+ Sbjct: 99 RKWDEATAVLAGDALQALGFELVADPRCHPDAGVRADLTLSLARAAGARGMVLGQALDMA 158 Query: 158 EE--------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 E D + +++ KT L + + E + +A L SY LG+AFQ+ Sbjct: 159 AETADTPLTLDEITALQAGKTGALITWSAEAGARLAQADPG---PLTSYADRLGLAFQIA 215 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS---TINDGKISVE 265 DD+LD G+ +GK +G+D GK T +L + R + ++ + Sbjct: 216 DDILDVEGDAETVGKAVGKDAGRGKATFVSLLGLDQAKTRAETLVTEACDALSPYGERAD 275 Query: 266 NLKKA--FIIMREN 277 L++A F+I R N Sbjct: 276 TLREAARFVISRRN 289 >gi|220916330|ref|YP_002491634.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|219954184|gb|ACL64568.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 293 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 18/216 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH------VLLACAIEFIHTATLLHDDVV 85 + ++Y + GGKR+RP L LA E G + + A A+E IHT +L+HDD+ Sbjct: 39 EAMRYALLGGGKRMRPALVLAA---CEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLP 95 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV---ACTL 140 LRRG+ + T+VLVGD L S AF ++ + A L+ A + Sbjct: 96 AMDDDDLRRGRPTVHKAYDEPTAVLVGDGLQSLAFAHLLASPDPAAAPLARLLAENAQLM 155 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 EG+ R ++ ++ + E + + ++++KT L +AA+ + AGV +A G+ Sbjct: 156 VEGQARDMA-GEHARLGEAEVMELMRTKTGALLAAAVAGGARCAGVPV---EAAYPVGLK 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 LG+AFQ+ DD+LD + +GK G+D GK TL Sbjct: 212 LGLAFQIADDLLDLTADAATLGKRAGKDAAAGKSTL 247 >gi|225868943|ref|YP_002744891.1| geranyltranstransferase [Streptococcus equi subsp. zooepidemicus] gi|225702219|emb|CAW99956.1| putative geranyltranstransferase [Streptococcus equi subsp. zooepidemicus] Length = 289 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 12/193 (6%) Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 D H +A AIE IHT +L+HDD+ +D+ RRG++ + + T++L GD L F Sbjct: 58 DAHYAIAAAIEMIHTGSLIHDDLPAMDNDDYRRGRLTSHKQFDEATAILAGDSLFLDPFA 117 Query: 120 MVIETKSQ-----EALEALSLVACT--LAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAV 171 ++ + ++ SL + T + G+L + + L D+ E +H +KT Sbjct: 118 LIAGADLPADLLVQLIQQFSLASGTFGMVGGQLLDMKGEQQLLDIQELSDIHA--NKTGK 175 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L + + +IA V L G +G AFQ+ DD+LD +E+GK +D Sbjct: 176 LLTLPFVAAGIIAEQSADVLSCLWEAGRLVGQAFQIRDDILDVTASFDELGKTPQKDLAA 235 Query: 232 GKPTLPVILAFQR 244 K T P +L +R Sbjct: 236 DKSTYPSLLGLER 248 >gi|254439465|ref|ZP_05052959.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] gi|198254911|gb|EDY79225.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] Length = 299 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 108/233 (46%), Gaps = 21/233 (9%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++PD + Y + GGK LR L L A + +A AIE +H +L+HDD+ Sbjct: 40 VVPDAMMYAV-RGGKALRGFLVLEGARLHGVEERIAAPIAGAIEAMHAYSLIHDDLPCMD 98 Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA--EGE 144 +RRGK W T+VL GD L + AF +++ + EA ++A LA GE Sbjct: 99 DDDVRRGKPTVHRKWDAATAVLTGDALQALAFELIMSADIKP--EAKVVLAHMLAIDAGE 156 Query: 145 LRQLSLSKNLDVTEEDY-----LHVIKS----KTAVLFSAALEVSSLIAGVQNSVRQALK 195 R + + D+ E L I+S KT L A IAG ++ Sbjct: 157 -RGMVGGQAADIAAETADAPLTLREIESLQAKKTGALIEWACAAGPRIAGADE---MPMR 212 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 YG LG AFQ+ DD+LD G+ N +GK + +D GK T +L G KR Sbjct: 213 HYGQALGRAFQIADDILDVTGDANTVGKAVCKDDAAGKATFVSLLGLD-GAKR 264 >gi|71422877|ref|XP_812265.1| polyprenyl synthase [Trypanosoma cruzi strain CL Brener] gi|70877026|gb|EAN90414.1| polyprenyl synthase, putative [Trypanosoma cruzi] Length = 747 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 28/251 (11%) Query: 19 ILKRICSDVEMIPD--------VVKYLIFSGGKRLRPMLTLA--TALMLEYRGDNHVLLA 68 +L R C+ ++P V++LI GGK R A AL +Y + ++ Sbjct: 421 VLGRFCTCKGVLPQHICDTLFLPVRFLIDRGGKYWRTFFFFACSNALSRDYADTSKCIII 480 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKS 126 E H +L+ DD+ D S++RRG AA + +G T++ G F +S F V + Sbjct: 481 --TELGHVGSLIIDDIEDGSSVRRGGKAAHVEFGTPTAINAGTACFFMSVPFAGVNSLPA 538 Query: 127 QEALEALSLV-----ACTLAEG-ELRQLS--LSKNLDVTE----EDYLHVIKS-KTAVLF 173 ++A L A +G ++R L + + E ED + I + KT + Sbjct: 539 EKAKRFYELYFEMMKAAHAGQGLDIRGLGYLMPDVVRTGETKALEDAVKAIHTCKTGAIC 598 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 A + ++ V QA++ +G +G+A+Q++DDVL +G + K GED R+GK Sbjct: 599 GAICSFACVLTDTSEEVTQAMEEFGKAIGLAYQIIDDVLGVKGFEGNL-KEAGEDIRDGK 657 Query: 234 PTLPVILAFQR 244 T PV A + Sbjct: 658 ITYPVAKAMGK 668 >gi|159039018|ref|YP_001538271.1| polyprenyl synthetase [Salinispora arenicola CNS-205] gi|157917853|gb|ABV99280.1| Polyprenyl synthetase [Salinispora arenicola CNS-205] Length = 360 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 78/280 (27%), Positives = 117/280 (41%), Gaps = 66/280 (23%) Query: 11 DMEKVNFLILKRIC-SDVE----MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D +FL +R +DV+ + D V+ + GGKRLRP YRG + Sbjct: 20 DKALADFLAARRTWMTDVDGSLAPVADAVEAFVLGGGKRLRPAFA-----YWGYRGAGGI 74 Query: 66 ------LLACAIEFIHTATLLHDDVVDDSALRRGKVAARL---------VW-------GN 103 A+EF+ + L+HDD++D S RRG+ A L W G+ Sbjct: 75 DTEQVATALAALEFVQASALIHDDLMDRSDTRRGEPAVHLRFAAQHRSAGWDGDADGFGD 134 Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163 ++L+GD C+V S E L + L T+A R + +VT YL Sbjct: 135 AAAILLGDL------CLVW---SDELLHSAGLDPRTVARA--RPIFDQMRSEVTVGQYLD 183 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNS--------------------VRQALKSYGMNLGI 203 V+ T ++E + +A +++ + A +YG+ LG Sbjct: 184 VLTQATG---DTSVEWAGKVARYKSAKYTVERPLLLGAALADATPEIHAAYSTYGLPLGE 240 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AFQL DDVL G+ + GK G+D R GK T V A + Sbjct: 241 AFQLRDDVLGVFGDPAQTGKPAGDDLREGKRTYLVAAALE 280 >gi|254513023|ref|ZP_05125089.1| farnesyl diphosphate synthase [Rhodobacteraceae bacterium KLH11] gi|221533022|gb|EEE36017.1| farnesyl diphosphate synthase [Rhodobacteraceae bacterium KLH11] Length = 288 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 23/265 (8%) Query: 32 DVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 D+ + + ++ GGKRLR L L +A + E + A IE +H +L+HDD+ Sbjct: 28 DITRAMAYATAGGKRLRGFLVLESARLHEIDLARAIWPATGIEALHAYSLVHDDLPCMDD 87 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 LRRG+ + W T+VL GD L + AF + + +A + +A TLA+ Q Sbjct: 88 DDLRRGRPTVHVKWDEGTAVLAGDALQTLAFELCTRPEVGDA-GVRAELALTLAQASGAQ 146 Query: 148 -LSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + L + LD+ E + + KT L + + +A + L+ Y Sbjct: 147 GMVLGQALDIAAETAATPLTLPEITRLQSGKTGALIEWSACAGARMA---QADPDPLRQY 203 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS-- 255 LG+AFQ+ DD+LD G+ ++ GK + +D + GK T +L R Sbjct: 204 ARALGLAFQIADDILDVEGDADKAGKRLQKDAQAGKATFVSLLGLDAAKARAAELVDQAC 263 Query: 256 -TINDGKISVENLKKA--FIIMREN 277 ++ E LK A F+I R++ Sbjct: 264 VALDSYGAQAETLKDAARFVIARDS 288 >gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis] Length = 369 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 92/184 (50%), Gaps = 15/184 (8%) Query: 43 KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLV 100 KR PM+ +A + + ACA+E +HTA+L+HDD+ +DD +RRG+ + V Sbjct: 121 KRGPPMMCIAACEAVGGSKQQALPTACALEMVHTASLIHDDLPCMDDDPIRRGQPSNHTV 180 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---------GELRQLSLS 151 +G +VL GD L F ++ + S + + V +A+ G+ L + Sbjct: 181 FGVDMAVLAGDALFPLGFEYIVSSTSDVPPDRIVKVIAQIAKTVGSQGMVVGQYMDLGST 240 Query: 152 KN--LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 N D + +++H + K ++ + +I G + + L++YG ++G+ +Q+ D Sbjct: 241 GNNKFDPSLVEFIH--ERKFGIMAECSAVTGGIIGGATDEEVERLRNYGRSVGVLYQIAD 298 Query: 210 DVLD 213 D+L+ Sbjct: 299 DILE 302 >gi|57168796|ref|ZP_00367927.1| geranyltranstransferase (ispA) [Campylobacter coli RM2228] gi|305432462|ref|ZP_07401624.1| geranyltranstransferase [Campylobacter coli JV20] gi|57019843|gb|EAL56526.1| geranyltranstransferase (ispA) [Campylobacter coli RM2228] gi|304444501|gb|EFM37152.1| geranyltranstransferase [Campylobacter coli JV20] Length = 279 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 17/252 (6%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-MLEYRGDNHVLLACAIEFIHTAT 78 L ++ S + + ++ +GGK R L L + N + A A+EFIHT + Sbjct: 13 LPKVQSFHPFFNEALAKMLKAGGKHFRAQLLLGVVQNKAPHLIPNALNAALALEFIHTYS 72 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +D++ LRRG + T++LVGD L ++AF ++ +E+++ ++L+ Sbjct: 73 LIHDDLPAMDNADLRRGTPTLHKSYDETTAILVGDALNTEAFLLLSNLNLKESIK-INLI 131 Query: 137 ACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + + L + +D ED +LH KTA L +AAL++ I + Sbjct: 132 RTLAFNAGINGMILGQAIDCYFEDKKLNLEELEFLHT--HKTAKLIAAALKMGCEICELD 189 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + G+ LG+ FQ+ DD++D E GK D K + +L ++ + Sbjct: 190 EKESEKIYQIGLKLGLIFQINDDIIDETMSEEESGKPSKHD--EHKNSFVNLLGLEKAIQ 247 Query: 248 REKNFWKSTIND 259 ++N ND Sbjct: 248 SKENLINECKND 259 >gi|146278824|ref|YP_001168983.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145557065|gb|ABP71678.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025] Length = 289 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 17/241 (7%) Query: 25 SDVEMIPDV--VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 +D E +P V ++Y + GGKRLR L L +A + + V A +IE +H +L+HD Sbjct: 23 ADREELPVVHAMRYAV-QGGKRLRGFLVLESARLHGIVPEAAVSAAASIEALHAYSLVHD 81 Query: 83 DVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 D+ LRRG W T+VL GD L + AF ++ + A + LV Sbjct: 82 DMPCMDDDDLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALGPAEVRIRLVETLA 141 Query: 141 AEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + L + LD+ T E H+ KT L + E +++ Sbjct: 142 KASGAEGMVLGQALDIAAETAAVPLTLEQITHLQAGKTGALICWSAEAGAILGQADTG-- 199 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L+ Y LG+AFQ+ DD+LD G+ ++ GK + +D GK T +L + R + Sbjct: 200 -PLRRYATALGLAFQIADDILDVEGDADKAGKRLQKDAEAGKATFVSLLGLEGAKARARA 258 Query: 252 F 252 Sbjct: 259 L 259 >gi|163801010|ref|ZP_02194910.1| polyprenyl synthetase family protein [Vibrio sp. AND4] gi|159175359|gb|EDP60156.1| polyprenyl synthetase family protein [Vibrio sp. AND4] Length = 242 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 20/190 (10%) Query: 49 LTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108 L ++ +L + Y D+ V LA IE +H A+L+HDD+ D ++RRG +A +G+ ++ Sbjct: 5 LEISLSLGIHY--DDAVRLAVTIELLHNASLIHDDIQDKDSVRRGAMAVWAKFGSSIAIC 62 Query: 109 VGDFLLSQAFCMVIETKSQEA----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164 GD+L+++AF ++ E ++ LEA T EG++ L+ +++ D Sbjct: 63 TGDYLIAKAFGVLAEVSCSKSVPKLLEATQKAVTTTIEGQIADLTAKEDI---HRDEYED 119 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 I +K A A LI ++S Q + NL +A+Q++DD+ D Sbjct: 120 IAAKKAGPLLALSLELPLIVTEKHSDIQTARHAAFNLAVAYQILDDINDS---------- 169 Query: 225 IGEDFRNGKP 234 +DF+ G+P Sbjct: 170 -AKDFKRGRP 178 >gi|86152300|ref|ZP_01070511.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94] gi|85840789|gb|EAQ58040.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94] Length = 281 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 21/268 (7%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L++L + +EK L ++ S + + ++ +GGK R L L+ + N Sbjct: 3 LKELFIHHLEKN----LPKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLN 58 Query: 64 HVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 L +A A+EFIHT +L+HDD+ +D++ RRG + T++LVGD L ++AF + Sbjct: 59 QALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLV 118 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAV 171 + ++ ++ + L+ L + + + +D ED +LH KTA Sbjct: 119 LSHAHLKDEIK-IKLIKTLAFNAGLNGMVIGQAIDCFFEDKKLSLNELEFLHT--HKTAR 175 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L +AAL++ I + N + G+ LG+ FQ+ DD++D + GK D Sbjct: 176 LIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDIH- 234 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTIND 259 K + +L ++ K ++N D Sbjct: 235 -KNSFVNLLGLEQAIKTKENLLSECEQD 261 >gi|326382545|ref|ZP_08204236.1| polyprenyl synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326198664|gb|EGD55847.1| polyprenyl synthetase [Gordonia neofelifaecis NRRL B-59395] Length = 360 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 84/314 (26%), Positives = 134/314 (42%), Gaps = 33/314 (10%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDNHVLL--ACAIEFIHT 76 L I V DV+ + +GGKR+RP A + GD+ + L AIE I Sbjct: 26 LDAIYPAVAEAGDVLADFVLAGGKRVRPSFVYAGWRCGPDTAGDDTMALRVGAAIELIQA 85 Query: 77 ATLLHDDVVDDSALRRGK-----------VAARLV-----WGNQTSVLVGDFLLSQAFCM 120 L+HDD++D S RRG RL +G ++L+GD L+ A + Sbjct: 86 CALIHDDILDRSDTRRGNPTVHRRFEGLHAGRRLTGDSAHYGVSAAILLGDLALAWADDL 145 Query: 121 V----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED--------YLHVIKSK 168 V T L L ++ + LD+T E V++ K Sbjct: 146 VHGIGPATDGWADPRPLPRSVGVLWSRMRTEVLGGQLLDITNESSRDESVTAAYRVMEYK 205 Query: 169 TAVLFSA-ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 TA A L++ + ++G ++ +L G++LGIAFQL DDVL G+ + GK G+ Sbjct: 206 TAAYTVARPLQLGAALSGADAALSGSLHRIGLDLGIAFQLRDDVLGVFGDPEQTGKPSGD 265 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287 D GK T + QR ++ + ++++ +S L A ++ + AL + E + Sbjct: 266 DLIEGKRTALLAEGLQRASRTDGEVLRNSVGR-DLSDAELTAARAVLTGSGALAEIERQI 324 Query: 288 YSYGQKAKDSLRCL 301 Q A D + L Sbjct: 325 DDRLQAALDGIVAL 338 >gi|114769799|ref|ZP_01447409.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [alpha proteobacterium HTCC2255] gi|114549504|gb|EAU52386.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [alpha proteobacterium HTCC2255] Length = 335 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 111/214 (51%), Gaps = 11/214 (5%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L + V+ LIL R+ + + + + + GK LR + + +A + E +L A Sbjct: 23 LPSVNHVHELILNRLENVDASLSEAAFFHFKTPGKMLRAKMAIQSASLAEIDISTSLLWA 82 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----T 124 A+E +H A+L+HDD+ D RRG+ + + +G T++ +GD+L++ +F + E + Sbjct: 83 AAVEVLHNASLIHDDICDGDKQRRGRESIWVKFGRDTALTLGDWLIALSFELASEAAEMS 142 Query: 125 KSQEALEALSLVACTLAEGELRQLSL--SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + + L+ T G+ + +++ DV YL + KTA L +A + +L Sbjct: 143 NTPRLVGVLARHMATTTAGQAMEFGWNSTQSWDV----YLKIAADKTAPLLTAPIHGVTL 198 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 ++G + + A+ Y +LG A+Q+ +D+ +++G Sbjct: 199 MSGT-SGLGFAISGYFCDLGKAYQIANDIQNFKG 231 >gi|93278758|pdb|2AZJ|A Chain A, Crystal Structure For The Mutant D81c Of Sulfolobus Solfataricus Hexaprenyl Pyrophosphate Synthase gi|93278759|pdb|2AZJ|B Chain B, Crystal Structure For The Mutant D81c Of Sulfolobus Solfataricus Hexaprenyl Pyrophosphate Synthase Length = 289 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 13/206 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D+ Y I GKR R L + + L + A AIE +H+A+L D+VD A R Sbjct: 40 DISSY-ILKDGKRFRGTLNMFFTVALGGDIKDSYGGALAIEILHSASLALCDIVDLDATR 98 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG AA +V+GN+ + + ++L+ A ++ + +AL + + G LR + Sbjct: 99 RGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGDDALNTSIELWKDTSVGALRDM--- 155 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 DY+ I+ KT LF + +S+ + N+ +Q L G LGI +Q++DD Sbjct: 156 ----YDNSDYIRTIELKTGSLFKLSTVLSAYASKHYNTKQQML-DVGKYLGIIYQVIDDF 210 Query: 212 LDYRG----EVNEMGKNIGEDFRNGK 233 +DY+ E++ K + + +R GK Sbjct: 211 VDYKTKKVEEIDGSAKQLFKYYREGK 236 >gi|254262158|emb|CAZ90487.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter turicensis] Length = 224 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 62/186 (33%), Positives = 102/186 (54%), Gaps = 18/186 (9%) Query: 67 LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-- 122 +ACA+E +H ++L+ DD+ +D++ALRRG+ +G ++L LLS AF +++ Sbjct: 1 MACAVEMVHASSLILDDIPCMDNAALRRGRPTIHRQYGEDVAILAAVALLSSAFGVMVAA 60 Query: 123 -----ETKSQEALEALSLVACT--LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 E +SQ E LS+ T L +G+ + L + E+ + KT+VLF A Sbjct: 61 QGLSPECRSQAVAE-LSMAVGTQGLVQGQYKDLR-EGTAPRSAEEIATTNELKTSVLFGA 118 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L++++L AG + RQ ++ + +LG AFQL+DD+ D GK+I +D GK T Sbjct: 119 TLQIAALAAGASPAARQKMRCFAQDLGQAFQLLDDLADGHAGT---GKDINKD--AGKST 173 Query: 236 LPVILA 241 L +L Sbjct: 174 LVAMLG 179 >gi|86149392|ref|ZP_01067623.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6] gi|86153173|ref|ZP_01071378.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596676|ref|ZP_01099913.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25] gi|148925783|ref|ZP_01809471.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486] gi|218563233|ref|YP_002345013.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840174|gb|EAQ57432.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85844058|gb|EAQ61268.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni HB93-13] gi|88191517|gb|EAQ95489.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25] gi|112360940|emb|CAL35741.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845793|gb|EDK22884.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486] gi|284926838|gb|ADC29190.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni IA3902] gi|315927606|gb|EFV06937.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929482|gb|EFV08678.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni 305] Length = 281 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 21/268 (7%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L++L + +EK L ++ S + + ++ +GGK R L L+ + N Sbjct: 3 LKELFIHHLEKN----LPKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLN 58 Query: 64 HVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 L +A A+EFIHT +L+HDD+ +D++ RRG + T++LVGD L ++AF + Sbjct: 59 QALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLV 118 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAV 171 + ++ ++ + L+ L + + + +D ED +LH KTA Sbjct: 119 LSHAHLKDEIK-IKLIKTLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHT--HKTAR 175 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L +AAL++ I + N + G+ LG+ FQ+ DD++D + GK D Sbjct: 176 LIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDIH- 234 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTIND 259 K + +L ++ K ++N D Sbjct: 235 -KNSFVNLLGLEQAIKTKENLLSECEQD 261 >gi|229817447|ref|ZP_04447729.1| hypothetical protein BIFANG_02710 [Bifidobacterium angulatum DSM 20098] gi|229785236|gb|EEP21350.1| hypothetical protein BIFANG_02710 [Bifidobacterium angulatum DSM 20098] Length = 359 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 107/221 (48%), Gaps = 27/221 (12%) Query: 41 GGKRLRPMLTLATALMLEYRGD--NHVL-LACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GGKRLR +L LA + D N +L +ACA+E TA L+HDD++DDS LRRGK +A Sbjct: 52 GGKRLRALLMLAAYDAFDGHADTRNAMLDVACALEVFQTAALVHDDIIDDSDLRRGKPSA 111 Query: 98 RLVWGNQTS-------VLVGDFLLSQAFCMVIETKSQEAL-EALSLVACTLAEGELRQLS 149 T + + L C+ I ++ L A +L + L R++ Sbjct: 112 HRALETDTGSPAIGRGLGLMLGDLLATVCIDIVNEAAALLPHATALTSAFL--NMQREVE 169 Query: 150 LSKNLDVTEEDY------------LHVIKSKTAVLFS-AALEVSSLIAG-VQNSVRQALK 195 + + LD+ E L+V + KTA + A +E++ L +G R+ Sbjct: 170 IGQILDLAVEQAPLQDAEALANASLNVFRWKTASYTTIAPIELALLGSGAAPGQARERAL 229 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG+AFQL DD++D G GK +G D R GK T+ Sbjct: 230 AIGKPLGLAFQLEDDLIDVIGSSRATGKPVGGDIREGKRTV 270 >gi|294811347|ref|ZP_06769990.1| Putative geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|326439921|ref|ZP_08214655.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|294323946|gb|EFG05589.1| Putative geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 395 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 121/258 (46%), Gaps = 28/258 (10%) Query: 31 PDVVKYL---IFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVV 85 P+VV+ L + SGGKRLRP+L + D +L A ++E T L+HDD++ Sbjct: 79 PEVVRILRDFLASGGKRLRPLLCVVGWHAAGGDEDPAAVLPVAASLELYQTFVLIHDDII 138 Query: 86 DDSALRRGK------VAARLVWGNQTSVL-VGDFLLSQAFCMV----------IETKSQE 128 DDSALRRG+ +AAR V + + L G+ LL+ ++ ++T + Sbjct: 139 DDSALRRGRPAVHRALAARHVGHDSAARLGAGEALLAGNLALIWCQELLHTAELDTPRRA 198 Query: 129 ALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSSLIA 184 A+ ++ LAE G+ R L ++ LD E L +I+ KTA L++ Sbjct: 199 AVHRVN--DTMLAEVMFGQYRDLLGTERLDDDIEAALGIIRYKTAAGTIQRPLQLGVAAG 256 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G + +G+ LG AFQL DD+LD G + D R GK T+ + LA Sbjct: 257 GGDEETHRFCTEFGVPLGEAFQLRDDLLDVFGSPDGRSAPGLNDLREGKHTVLLALAMAG 316 Query: 245 GTKREKNFWKSTINDGKI 262 ++ +S + ++ Sbjct: 317 AGPGQRVRLRSLVGRARL 334 >gi|262199070|ref|YP_003270279.1| polyprenyl synthetase [Haliangium ochraceum DSM 14365] gi|262082417|gb|ACY18386.1| Polyprenyl synthetase [Haliangium ochraceum DSM 14365] Length = 291 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 7/191 (3%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 E + + ++Y GKRLRP LTLA + + + A A+E +HT TL+HDD+ Sbjct: 52 TERLLEAMRYAALGPGKRLRPALTLAACEAVGGDRASALPAAAAVELLHTYTLVHDDLPC 111 Query: 87 DSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLVACT--L 140 RRG+ + + +VL GD LLS+AF ++ + ++ +A+ L+ A T L Sbjct: 112 MDDDDERRGRPTVHVAYDEALAVLAGDALLSEAFGVLAKLGPRAGDAVAVLARRAGTAEL 171 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G++ L + + + L + + KT LF+AA+E+ ++ G R L YG+ Sbjct: 172 LAGQVHDLVIEAREEAPSFEELEALHAAKTGALFAAAVELGAIAGGASAEDRANLARYGL 231 Query: 200 NLGIAFQLVDD 210 +G+AFQ DD Sbjct: 232 AIGVAFQHADD 242 >gi|25028623|ref|NP_738677.1| putative polyprenyl synthase [Corynebacterium efficiens YS-314] gi|259507682|ref|ZP_05750582.1| polyprenyl synthetase [Corynebacterium efficiens YS-314] gi|23493909|dbj|BAC18877.1| putative polyprenyl synthase [Corynebacterium efficiens YS-314] gi|259164729|gb|EEW49283.1| polyprenyl synthetase [Corynebacterium efficiens YS-314] Length = 366 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 111/239 (46%), Gaps = 28/239 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGD-----NHVLLACA-IEFIHTATLLHDDVVDD 87 ++ + +GGKR+RP+ A + + G N VL A A +EFI L+HDD++D Sbjct: 47 LRDFVLNGGKRIRPLYVWAGFVAAQGPGRSSEDINAVLDAAASLEFIQACALIHDDIIDS 106 Query: 88 SALRRG-KVAARLV---------------WGNQTSVLVGDFLLSQAFCMVIETK-----S 126 S RRG R V +G ++L GD L A M+ ++ Sbjct: 107 SDTRRGAPTVHRAVESMHGAVGLEGDAAHFGESVAILAGDMALVWAEDMLQDSGLSAAAL 166 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAG 185 A +A + + G+L + L + E V + KTA L + + +AG Sbjct: 167 ARARDAWRGMRTEVIGGQLLDIYLEAQASESVELANSVNRFKTAAYTIERPLHLGASLAG 226 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + AL++YG ++GIAFQL DD+L G+ GK G+D R GK T+ + LA QR Sbjct: 227 GAPELIDALRNYGRDIGIAFQLRDDLLGVFGDPAVTGKPAGDDIREGKRTVLLALALQR 285 >gi|304394308|ref|ZP_07376231.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130] gi|303293748|gb|EFL88125.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130] Length = 300 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 9/218 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + +++ + +GGKR+RP L + +A + D+ + ACA+E +H+ +L+HDD+ Sbjct: 37 ERLVAAMRHGVLNGGKRVRPFLVVESAALFGVSLDDALPTACALECLHSFSLVHDDLPAM 96 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 LRRG+ + ++L GD L + AF ++ S +A L Sbjct: 97 DDDDLRRGQPTVHKAFDEALAILAGDALSTLAFDILASRSSADAAVRCELTTMLARASGW 156 Query: 146 RQLSLSKNLDVTEED------YLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + LD+ ED + +++ KT L A E +++ G ++ R AL+SYG Sbjct: 157 GGMIGGQVLDIEAEDGAPTDAEIRTLQAMKTGALIRFACEAGAVLGGADDAARAALRSYG 216 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +G+AFQL DD+LD + +GK G+D K TL Sbjct: 217 ETVGLAFQLADDILDVTADTATLGKTAGKDLDADKGTL 254 >gi|78485732|ref|YP_391657.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2] gi|78364018|gb|ABB41983.1| farnesyl-diphosphate synthase [Thiomicrospira crunogena XCL-2] Length = 291 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 19/224 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSA 89 + +KY + GKRLRP L A + D ACA+E IH+ +L+H +DD Sbjct: 32 EAIKYATLNNGKRLRPALVYAVGESMNISLDKLDAAACAVELIHSYSLVHDDLPAMDDDD 91 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS-----LVACTLAEGE 144 LRRG+ + + T++LVGD + AF E SQ+A A S + + A G Sbjct: 92 LRRGQPTCHIQFDEATAILVGDAQQTLAF----EALSQDAFLADSDKVKLITLLSHASGG 147 Query: 145 LRQLSLSKNLDVTEEDYLHVIK--SKTAVLFSAALEVSSLIAGVQNSV-----RQALKSY 197 + + +D+ +L + K + + AL +SL+ G S + L Sbjct: 148 AGMIG-GQIIDIQSNGHLPELSQLQKMHEMKTGALITASLLMGAAQSTHYPEKQPGLAKL 206 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 G +G+AFQ+ DD+LD G +GK G D K T P +L Sbjct: 207 GQKIGLAFQIHDDILDIEGSTEVLGKPQGSDEAADKSTYPKLLG 250 >gi|153952306|ref|YP_001398921.1| geranyltranstransferase [Campylobacter jejuni subsp. doylei 269.97] gi|152939752|gb|ABS44493.1| geranyltranstransferase [Campylobacter jejuni subsp. doylei 269.97] Length = 281 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 21/268 (7%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L++L + +EK L ++ S + + ++ +GGK R L L+ + N Sbjct: 3 LKELFIHHLEKN----LPKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLN 58 Query: 64 HVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 L +A A+EFIHT +L+HDD+ +D++ RRG + T++LVGD L ++AF + Sbjct: 59 QALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLV 118 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAV 171 + ++ ++ + L+ L + + + +D ED +LH KTA Sbjct: 119 LSHAHLKDEIK-IKLIKTLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHT--HKTAR 175 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L +AAL++ I + N + G+ LG+ FQ+ DD++D + GK D Sbjct: 176 LIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPANNDIH- 234 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTIND 259 K + +L ++ K ++N D Sbjct: 235 -KNSFVNLLGLEQAIKTKENLLSECEQD 261 >gi|291302480|ref|YP_003513758.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728] gi|290571700|gb|ADD44665.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728] Length = 357 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 35/243 (14%) Query: 26 DVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLAC--AIEFIHTA 77 D E+ P + + I GGKR+RP +RG D ++AC A+E + + Sbjct: 33 DSELAPVCEAAEIFILGGGKRIRPAFA-----YWGFRGAGGEDGDAVVACVSALELLQAS 87 Query: 78 TLLHDDVVDDSALRRGK--VAARLV-------W-------GNQTSVLVGDFLLSQAFCM- 120 L+HDD++D S RRG+ V R W G ++L+GD ++ + M Sbjct: 88 ALMHDDLMDGSDTRRGEPSVHRRFALRHTSSGWSGGADDFGACAAILLGDLCMTWSDEMF 147 Query: 121 ----VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSA 175 + + A + ++ G+ + D T L V + K A Sbjct: 148 TGAGMPDAAVAAARADFDWMRTEVSAGQYLDVLTQAQRDTTSARALKVARYKAAKYTIER 207 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L + + +AG +R A ++G+ LG AFQL DDVL G+ + GK G+D R GK T Sbjct: 208 PLLIGAALAGGSPELRSAYSAFGLPLGEAFQLRDDVLGVFGDPTQTGKPAGDDLREGKHT 267 Query: 236 LPV 238 V Sbjct: 268 FLV 270 >gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba Length = 268 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 31/194 (15%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 I + ++Y + +GGKR+RP+L +A ++ + ACA+E IHT +L+HDD Sbjct: 40 IHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPAACAVEMIHTMSLIHDD------ 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC----------T 139 V+G +VL GD LLS AF + S E A + A Sbjct: 94 ----------VYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEG 143 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 L G++ +S N+ + ++H+ KTA L A+ + +I G + + L+ + Sbjct: 144 LVAGQVVDIS---NVGLEHLKFIHL--HKTAALLEASAVLGGIIGGGSDEEIERLRKFAR 198 Query: 200 NLGIAFQLVDDVLD 213 +G+ FQ+VDD+LD Sbjct: 199 CIGLLFQVVDDILD 212 >gi|86157523|ref|YP_464308.1| farnesyl-diphosphate synthase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774034|gb|ABC80871.1| farnesyl-diphosphate synthase [Anaeromyxobacter dehalogenans 2CP-C] Length = 293 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 112/220 (50%), Gaps = 18/220 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH------VLLACAIEFIHTATLLHDDVV 85 + +Y + GGKR+RP L LA E G + + A A+E IHT +L+HDD+ Sbjct: 39 EATRYALLGGGKRMRPALVLAA---CEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLP 95 Query: 86 DDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV---ACTL 140 LRRG+ + T+VLVGD L S AF ++ + A L+ A + Sbjct: 96 AMDDDDLRRGRPTVHRAFDEATAVLVGDGLQSLAFAHLLASPDPAAAPLARLLAENAQLM 155 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 EG+ R ++ ++ + E + + ++++KT L +AA+ + + +A+ G+ Sbjct: 156 VEGQARDMA-GEHARLGEAEVMELMRTKTGALLAAAVAGGAR---CAGASAEAVYPVGLK 211 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 LG+AFQ+ DD+LD + +GK G+D GK TL ++ Sbjct: 212 LGLAFQIADDLLDLTADAATLGKRAGKDAAAGKSTLHAVV 251 >gi|254434422|ref|ZP_05047930.1| polyprenyl synthetase family [Nitrosococcus oceani AFC27] gi|207090755|gb|EDZ68026.1| polyprenyl synthetase family [Nitrosococcus oceani AFC27] Length = 346 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 20/197 (10%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GKR+R L E + ++ + A AIE I A+L+HDD +D+ +RR + A V Sbjct: 59 GKRIRGCLVFLMNQTQEGKLEDALPRAVAIECIQAASLIHDDYLDEDVIRRKRPATWTVE 118 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS------------ 149 G + +VL+GD + + A + E + +A T+A G ++L Sbjct: 119 GPRRAVLLGDIMFATAIQSMAELSKDDGATVARAIA-TVANGAYQELFWQTKTRERRLHK 177 Query: 150 -LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 L KNL Y H+I KT LF AA ++ ++ AG + ++G G A+Q+ Sbjct: 178 LLEKNL------YDHIIYLKTGALFGAACQLGAIAAGALREIPTLAYAFGARTGEAYQIA 231 Query: 209 DDVLDYRGEVNEMGKNI 225 DD+ D+ + KN+ Sbjct: 232 DDLEDFIAWWTQPQKNL 248 >gi|294817027|ref|ZP_06775669.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|326445912|ref|ZP_08220646.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|294321842|gb|EFG03977.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 297 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 21/211 (9%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGK------VAARL----------VWGNQT 105 D V A A+E H L+HDD++DDSA RRG +A RL G T Sbjct: 15 DEVVSTAAALEMFHAFALIHDDIMDDSATRRGSPTVHRALADRLGAALDPDQAGQLGVST 74 Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLAE---GELRQLSLSKNLDVTEEDY 161 ++LVGD L+ + ++ + L A L LV AE G+ ++ ++ Sbjct: 75 AILVGDLALTWSDELLYAPLTPHRLAAVLPLVTAMRAETVHGQYLDITSARRPGTDTSLA 134 Query: 162 LHVIKSKTAV-LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 L + + KTA L + + +AG + + L +Y + G AFQL DD+L G+ Sbjct: 135 LRIARYKTAAYTMERPLHIGAALAGARPELLAGLSAYALPAGEAFQLADDLLGVFGDPRR 194 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 GK +D R GK T+ V LA + T +++ Sbjct: 195 TGKPDLDDLRGGKHTVLVALAREHATPEQRH 225 >gi|225432262|ref|XP_002275812.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 361 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 113/224 (50%), Gaps = 13/224 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + GGKR+ P++ ++ ++ + + + CA+E +H +L+ DD+ +D+ +R Sbjct: 99 MRYSLLDGGKRIHPIVCISACELVGGQESTAMPVVCAVEMLHVVSLMQDDLPCMDNDDIR 158 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF---------CMVIETKSQEALEAL--SLVACTL 140 RGK + +G ++L D LL+ AF +V + A++ L S+ + L Sbjct: 159 RGKPSNHKAFGESVTILAVDALLALAFEHVATMSTVGVVPPMVTVHAIQELARSIGSQGL 218 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ LS + ++ E + +K L A+ + +++ G + + L+ +G Sbjct: 219 VAGQFLDLSSEGSPEIGLEGLESIHINKAGPLLEASAVIGAMLGGGSSEQMEILRKFGRC 278 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G+ +Q+VDD+LD E+GK G+D K T P ++ ++ Sbjct: 279 VGLLYQVVDDILDITKSTQELGKTAGKDLVADKVTYPKLVGIEK 322 >gi|205355656|ref|ZP_03222426.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346433|gb|EDZ33066.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8421] Length = 250 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 17/232 (7%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 +GGK R L L+ + N L +A A+EFIHT +L+HDD+ +D++ RRG Sbjct: 4 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 63 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 + T++LVGD L ++AF ++ ++ ++ + L+ L + + + +D Sbjct: 64 LHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIK-IKLIKTLAFNAGLNGMVIGQAIDC 122 Query: 157 TEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 ED +LH KTA L +AAL++ I + N + G+ LG+ FQ+ Sbjct: 123 FFEDKRLSLNELEFLHT--HKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQI 180 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 DD++D + GK D K + +L ++ K ++N D Sbjct: 181 NDDIIDVTTSQEQSGKPTNNDIH--KNSFVNLLGLEQAIKTKENLLSECEQD 230 >gi|302206535|gb|ADL10877.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis C231] Length = 372 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 30/246 (12%) Query: 28 EMIPDVVKYL---IFSGGKRLRPMLTLATALM---LEYRGDNHVLLAC--AIEFIHTATL 79 E + VV YL + GGKR+RP A L LE D +LA ++E I L Sbjct: 44 EPVSRVVTYLEDFVLGGGKRIRPSYAWAGFLAGNGLEGTEDPEAVLASISSLELIQACAL 103 Query: 80 LHDDVVDDSALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQAFCMVIE 123 +HDD++D S RRG+ W G ++L+GD + A M Sbjct: 104 IHDDIIDASDSRRGQPTVHRSAEACHRDNSWNGDSAHFGESIAILLGDLAFAWADDMFRT 163 Query: 124 TKSQEALEALSLVA-----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAAL 177 + +A A + A + G+L + L + E +V + KTA L Sbjct: 164 SGLSDAAIARTSNAWRGMRTEVIGGQLLDVFLESAGSESIELAENVNRFKTAAYTIERPL 223 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + IAG + AL+ YG ++G+A+QL DD+L G+ GK G+D R GK T+ Sbjct: 224 HIGAAIAGADERIVHALRDYGRDIGVAYQLRDDLLGVFGDPAVTGKPAGDDLREGKRTVL 283 Query: 238 VILAFQ 243 V A + Sbjct: 284 VAKALE 289 >gi|103487675|ref|YP_617236.1| polyprenyl synthetase [Sphingopyxis alaskensis RB2256] gi|98977752|gb|ABF53903.1| farnesyl-diphosphate synthase [Sphingopyxis alaskensis RB2256] Length = 306 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 14/225 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y +GGKRLRP+L A + + + A+E +H +L+HDD+ Sbjct: 46 EAMRYAAIAGGKRLRPLLVRAAGDLFHVDRALTLRVGAAVEAMHVYSLIHDDLPCMDDDD 105 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG------ 143 +RRGK +G T+VL GD L + AF + + + + + C LA Sbjct: 106 MRRGKPTTHKAFGEATAVLAGDSLHALAFEWLCDPATSADPFVRAELCCELARAAGPAGM 165 Query: 144 ---ELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 ++ L+ + + D+ L +K+ + FS +E +++A + R+ L+ Y Sbjct: 166 AGGQMMDLAAETSDFDLPTVTRLQQLKTGALIAFS--VEAGAILARIPAEGRRPLRGYAR 223 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 ++G+AFQ+ DD++D G+ GK + +D GK T ++ R Sbjct: 224 DIGLAFQIADDIMDVEGDEALAGKALHKDEAAGKATFVTLMGLDR 268 >gi|256377875|ref|YP_003101535.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827] gi|255922178|gb|ACU37689.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827] Length = 361 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 109/236 (46%), Gaps = 37/236 (15%) Query: 42 GKRLRPMLTL-----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 GKR+RP+ A D V A+E + L+HDDV+D S RRG+ A Sbjct: 52 GKRVRPIFAWCGWLAAGGAETGPESDAVVRALVALELLQVCALVHDDVMDRSTTRRGRAA 111 Query: 97 A---------RLVW-------GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 A RL W G+ +VLVGD L+ + ++ LE +L + Sbjct: 112 AHVAFAARHRRLRWSGDPKHYGDCAAVLVGDLALAWSDDAIVTA----GLEPAALSRAWV 167 Query: 141 AEGELR-QLSLSKNLDV--------TEEDYLHVIKSKTAV-LFSAALEVSSLIAGVQNSV 190 A +R ++ ++LD+ + E L V KTA L + + +AG + Sbjct: 168 AWQAMRVEMMAGQHLDLLAGARREESLEQALRVAALKTAAYTVERPLHLGAAMAGAGPEL 227 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK--PTLPVILAFQR 244 +AL+S+G ++G+AFQL DD+L G+ GK +G+D R GK P + + L R Sbjct: 228 VEALRSFGRDIGVAFQLRDDLLGVFGDPGVTGKPVGDDLREGKRTPLMSIALGLAR 283 >gi|77165696|ref|YP_344221.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707] gi|76884010|gb|ABA58691.1| Polyprenyl synthetase [Nitrosococcus oceani ATCC 19707] Length = 341 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 20/197 (10%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GKR+R L E + ++ + A AIE I A+L+HDD +D+ +RR + A V Sbjct: 54 GKRIRGCLVFLMNQTQEGKLEDALPRAVAIECIQAASLIHDDYLDEDVIRRKRPATWTVE 113 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS------------ 149 G + +VL+GD + + A + E + +A T+A G ++L Sbjct: 114 GPRRAVLLGDIMFATAIQSMAELSKDDGATVARAIA-TVANGAYQELFWQTKTRERRLHK 172 Query: 150 -LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 L KNL Y H+I KT LF AA ++ ++ AG + ++G G A+Q+ Sbjct: 173 LLEKNL------YDHIIYLKTGALFGAACQLGAIAAGALREIPTLAYAFGARTGEAYQIA 226 Query: 209 DDVLDYRGEVNEMGKNI 225 DD+ D+ + KN+ Sbjct: 227 DDLEDFIAWWTQPQKNL 243 >gi|283957030|ref|ZP_06374502.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336] gi|283791531|gb|EFC30328.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336] Length = 281 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 21/268 (7%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L++L + +EK L ++ S + + ++ +GGK R L L+ + N Sbjct: 3 LKELFIHHLEKN----LPKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLN 58 Query: 64 HVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 L +A A+EFIHT +L+HDD+ +D++ RRG + T++LVGD L ++AF + Sbjct: 59 QALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDEPTAILVGDALNTEAFLV 118 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAV 171 + ++ ++ + L+ L + + + +D ED +LH KTA Sbjct: 119 LSHAHLKDEIK-IKLIKTLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHT--HKTAR 175 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L +AAL++ I + N + G+ LG+ FQ+ DD++D + GK D Sbjct: 176 LIAAALKMGCEICELNNEENNQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDTH- 234 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTIND 259 K + +L ++ K ++N D Sbjct: 235 -KNSFVNLLGLEQAIKTKENLLSECEQD 261 >gi|119606491|gb|EAW86085.1| prenyl (decaprenyl) diphosphate synthase, subunit 1, isoform CRA_b [Homo sapiens] Length = 306 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 7/175 (4%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L +D++ + I K + + ++ +Y GK RP++ +A A + + H Sbjct: 98 LGWRDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRH 157 Query: 65 V-----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 158 VQASQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 217 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 + + + L+ V L GE QL +N + YL KTA L + Sbjct: 218 ALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIA 272 >gi|242310626|ref|ZP_04809781.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT 98-5489] gi|239523024|gb|EEQ62890.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT 98-5489] Length = 288 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 11/204 (5%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLL-ACAIEFIHTATLLHDDV--VDDSALRRG 93 ++ +GGKR RP L L+ + + A A+E +HT +L+HDD+ +D++ LRRG Sbjct: 37 MVENGGKRFRPKLLLSIVDAYKPKSIQKAFSSALALEILHTYSLIHDDLPAMDNADLRRG 96 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 + ++L+GD L + +F + +K + ++ L+ G + + L + Sbjct: 97 AQTLHCKYDECGAILIGDALNTHSFYCIATSKLKPKIKN-KLIKILSYNGGIYGMVLGQA 155 Query: 154 LDVTEEDYLHVIK-------SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 LD E +K +KTA L +A+L++ +IA + + L G++LG+ FQ Sbjct: 156 LDCYFEKQTLPLKDLRTIHLNKTAKLIAASLQMGGIIAKCDKTTCKTLYKIGLDLGLFFQ 215 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFR 230 + DD++D E GK D + Sbjct: 216 IRDDIIDATQSSKEAGKTTHNDLQ 239 >gi|300858828|ref|YP_003783811.1| geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis FRC41] gi|300686282|gb|ADK29204.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis FRC41] gi|302331089|gb|ADL21283.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis 1002] gi|308276777|gb|ADO26676.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis I19] Length = 393 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 30/246 (12%) Query: 28 EMIPDVVKYL---IFSGGKRLRPMLTLATALM---LEYRGDNHVLLAC--AIEFIHTATL 79 E + VV YL + GGKR+RP A L LE D +LA ++E I L Sbjct: 65 EPVSRVVTYLEDFVLGGGKRIRPSYAWAGFLAGNGLEGTEDPEAVLASISSLELIQACAL 124 Query: 80 LHDDVVDDSALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQAFCMVIE 123 +HDD++D S RRG+ W G ++L+GD + A M Sbjct: 125 IHDDIIDASDSRRGQPTVHRSAEACHRDNSWNGDSAHFGESIAILLGDLAFAWADDMFRT 184 Query: 124 TKSQEALEALSLVA-----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAAL 177 + +A A + A + G+L + L + E +V + KTA L Sbjct: 185 SGLSDAAIARTSNAWRGMRTEVIGGQLLDVFLESAGSESIELAENVNRFKTAAYTIERPL 244 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + IAG + AL+ YG ++G+A+QL DD+L G+ GK G+D R GK T+ Sbjct: 245 HIGAAIAGADERIVHALRDYGRDIGVAYQLRDDLLGVFGDPAVTGKPAGDDLREGKRTVL 304 Query: 238 VILAFQ 243 V A + Sbjct: 305 VAKALE 310 >gi|282865685|ref|ZP_06274735.1| Polyprenyl synthetase [Streptomyces sp. ACTE] gi|282559329|gb|EFB64881.1| Polyprenyl synthetase [Streptomyces sp. ACTE] Length = 363 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 21/237 (8%) Query: 33 VVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 +++ L GGKR+R +L A L+ + A +IE +HT L+HDD++DDS R Sbjct: 52 LLRELSMRGGKRMRVVLLHEAAGLVSAEPAEGLDAAALSIELLHTHGLVHDDLIDDSPTR 111 Query: 92 RGKVAARLVWGNQ----------TSVLVGDFLLSQAFCMVIETKSQEAL-----EALSLV 136 RG + + + +VL GD L + +++E + AL EA + Sbjct: 112 RGGPSTYYAYRERFPRLPQAALGLTVLAGDLALGLSLRVLLEARLPVALRQAMAEAQTRA 171 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS--AALEVSSLIAGVQ-NSVRQA 193 A G++ L V ED LH + + +S A + + L AG Q + Q Sbjct: 172 AADTFVGQIVDLERDFTGAVPGEDVLHSVADFKSARYSVLAPMRLGLLAAGGQPEAFDQE 231 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP--TLPVILAFQRGTKR 248 L+ Y +GI Q+ DD LD G+ GK G D R+G+ T+ +L+ G +R Sbjct: 232 LRRYARLVGICGQMRDDYLDLYGDAEVTGKPTGTDLRDGRRSYTVSALLSVTEGAER 288 >gi|229490364|ref|ZP_04384205.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis SK121] gi|229322654|gb|EEN88434.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis SK121] Length = 379 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 118/265 (44%), Gaps = 31/265 (11%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L + L+D ++ I E ++ + GGKR+RP + A L Sbjct: 28 LPGLFEAALRDFFDSRRELVSNIGGGYEEAVSTLEAFVLRGGKRVRP--SFAWTGWLGAG 85 Query: 61 GD------NHVLLACA-IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ--------- 104 GD + V+ ACA +E + L+HDD++D S RRG + + NQ Sbjct: 86 GDPNGKNADAVIRACAALELVQACALVHDDIIDASTTRRGFPTVHVEFENQHRDEEWSGD 145 Query: 105 -------TSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAE----GELRQLSLSK 152 ++L+GD L+ A M+ E+ S EA +S V + G+ +S Sbjct: 146 SAHFGEAVAILLGDLALAWADDMIRESGISPEAAARVSPVWSAMRTEVLGGQFLDISNEA 205 Query: 153 NLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 D T E + V + KTA L + + + G + A +++G ++GIAFQL DD+ Sbjct: 206 RGDETVEAAMRVNRYKTAAYTIERPLHLGAALFGADAELVDAYRTFGTDIGIAFQLRDDL 265 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTL 236 L G+ + GK G+D GK T+ Sbjct: 266 LGVFGDPSVTGKPSGDDLIAGKRTV 290 >gi|39645583|gb|AAH63635.1| PDSS1 protein [Homo sapiens] Length = 306 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 7/175 (4%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L +D++ + I K + + ++ +Y GK RP++ +A A + + H Sbjct: 98 LGWRDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRH 157 Query: 65 V-----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 158 VQASQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 217 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 + + + L+ V L GE QL +N + YL KTA L + Sbjct: 218 ALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIA 272 >gi|255325357|ref|ZP_05366463.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141] gi|255297922|gb|EET77233.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141] Length = 359 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 111/266 (41%), Gaps = 38/266 (14%) Query: 13 EKVNFLILKR-----ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 E FL +R I + V ++ + GGKR+RP A L ++ V + Sbjct: 17 ELATFLDQRREQVAAIGAPVTKAVSFLESFVLDGGKRVRPTYAWAGYLAAGRGEEDPVAM 76 Query: 68 ---ACAIEFIHTATLLHDDVVDDSALRRGKVAARL----------------VWGNQTSVL 108 A ++EFI L+HDD++D S RRG +G ++L Sbjct: 77 LRAAASLEFIQACALIHDDIIDASNTRRGNPTVHRGVEKLHRESEYLGDPEFFGTSVAIL 136 Query: 109 VGDFLLSQAFCMVIETKSQEALEALSL---------VACTLAEGELRQLSLSKNLDVTEE 159 VGD L A M ++ L A +L + + G+L +SL + E Sbjct: 137 VGDLALVYAEDMFQDS----GLSAAALHRARSPWRGMRTEVIGGQLLDISLEAAGSESVE 192 Query: 160 DYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 V + KTA L + + AG + A + YG ++GIA+QL DD L G+ Sbjct: 193 LANSVNRYKTAAYTIERPLHLGAATAGASEELIAAFRGYGHDIGIAYQLRDDQLGVFGDP 252 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQR 244 GK G+D R GK T + LA QR Sbjct: 253 AVTGKPAGDDLREGKRTELLALALQR 278 >gi|326468439|gb|EGD92448.1| geranylgeranyl pyrophosphate synthetase [Trichophyton tonsurans CBS 112818] gi|326482590|gb|EGE06600.1| geranylgeranyl pyrophosphate synthetase [Trichophyton equinum CBS 127.97] Length = 382 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 7/230 (3%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y + GK +R L A L+ ++ ++ + +HTA+LL DDV D S LRRG Sbjct: 75 YTVNQPGKDIRGQLIAAYNRWLQVPEESLAVITKVVVMLHTASLLIDDVEDSSHLRRGAP 134 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ QA + + KS EA+ L G+ L L Sbjct: 135 VAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMNLHRGQGMDLYWRDTLT 194 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEEDYL ++ +KT LF A++ + ++SV +G+ FQ+ DD L+ Sbjct: 195 CPTEEDYLEMVGNKTGGLFRLAIK----LMQAESSVPIDCVPLVDLMGLMFQVCDDYLNL 250 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTINDGKI 262 K + ED GK + PVI + + + + N K ND ++ Sbjct: 251 SNPTYSKNKGLCEDLTEGKFSFPVIHSIRAQPENRQLINILKQKTNDNEV 300 >gi|300814962|ref|ZP_07095190.1| geranyltranstransferase family protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300510932|gb|EFK38204.1| geranyltranstransferase family protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 289 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 83/279 (29%), Positives = 135/279 (48%), Gaps = 44/279 (15%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLACAIEFIHTATLLHDDVVDD 87 I + +KY +FSGGKR+RP+L + T L D + A +E IHT +L+HDD+ Sbjct: 32 IYESMKYSLFSGGKRIRPLLCMITYNELAENPTLDKILPFAATLEMIHTYSLIHDDLPAM 91 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-SLVACTLA--- 141 LRR K V+ ++L GD LL+ + M + +K E+L+ + L C A Sbjct: 92 DDDDLRRDKPTNHKVYSEAVAILAGDGLLNMS--MEVISKYMESLDDIDELKKCIKALKF 149 Query: 142 ----EGELRQLSLSKNLDVTEEDYLH----------VIKSKTAVLFSAALEVSSLIAGVQ 187 G L + + LD+ DYL+ + KTA L A++ +++AG Sbjct: 150 IYNSSGVLGMIG-GQLLDI---DYLNEQYNEELCEDMYSLKTAALLKASIVTGAIMAGCD 205 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + LK +G +G+A+Q DD+LD + +D +NG+ T+ L F + Sbjct: 206 GEIITKLKEFGQYIGLAYQYKDDLLD-----------MNKDLKNGQKTM---LDFYSAEE 251 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEY 285 E N KS N G S+++++ I+++ AL+ EY Sbjct: 252 IE-NEIKSLTNKGLESIKDIEFKDDILKDFCLALIKREY 289 >gi|254561892|ref|YP_003068987.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens DM4] gi|254269170|emb|CAX25136.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens DM4] Length = 288 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 16/240 (6%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA----CAIEFIHTATLLHDD 83 ++ + ++Y +F GG R+RP L LA AL GD+ + AIE +H A+L+HDD Sbjct: 25 PLLAEAIRYAVFPGGHRIRPRLCLAVALAC---GDDDPATSEAAAAAIELLHCASLVHDD 81 Query: 84 VV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + DD+ +RR K + +G +VL GD L+ AF + + LV +A Sbjct: 82 LPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAFETLARGVVRSPTRLAGLVG-LIA 140 Query: 142 EGELRQLSLSKNLDVTEEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + E Y+ ++ ++KT LF+AA + AG + L G Sbjct: 141 RAAGSPSGIVAGQAWESEPYVDLVEYQQAKTGALFAAATVAGAAAAGAPPLPWRLL---G 197 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 LG A+Q+ DD+ D E+GK G D G+P +L +R K+ + I+ Sbjct: 198 ECLGAAYQVADDLRDVACRQEEIGKPAGRDATLGRPNAAALLGMGGALERLKHLTQEAID 257 >gi|332307431|ref|YP_004435282.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174760|gb|AEE24014.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 296 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 17/247 (6%) Query: 13 EKVNFLILKRICSDVEMIP---DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 ++V+ L+ +I E P ++Y + GGKR+RP L A L + A Sbjct: 12 QRVDALLQAQISDLDEHAPRLKKAMQYALLMGGKRMRPFLVYAVGEALGVSESDLDAPAL 71 Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----- 122 AIE IH +L+HDD+ LRRG + + ++L GD L + AF +V+ Sbjct: 72 AIECIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTLAFDIVVNYPLS 131 Query: 123 ETKSQEALEALSLVACT-----LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + +Q+ +E + +++ + G+ L S N +++ + KT L AA+ Sbjct: 132 DFANQQRIELVRILSRASGYDGMCGGQGIDLQ-STNTLISQRQLEQLHSKKTGALIIAAV 190 Query: 178 EVS-SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +++ +L V + + L Y +G+AFQ+ DD+LD G+ +GK G D K T Sbjct: 191 KMAATLSTSVSDESKALLSQYAKTIGLAFQVQDDILDVVGDSKTLGKPQGSDQEQNKSTY 250 Query: 237 PVILAFQ 243 P +L + Sbjct: 251 PALLGLE 257 >gi|83951988|ref|ZP_00960720.1| farnesyl diphosphate synthase [Roseovarius nubinhibens ISM] gi|83836994|gb|EAP76291.1| farnesyl diphosphate synthase [Roseovarius nubinhibens ISM] Length = 287 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 99/209 (47%), Gaps = 18/209 (8%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGKRLR L + A + + + A AIE +H +L+HDD+ LRRG+ Sbjct: 38 GGKRLRAYLVIEGARLHGVPAEQAIWPATAIEALHAYSLVHDDMPCMDDDDLRRGRPTVH 97 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACTLAEGELRQLSLSKNLDV 156 W T+VLVGD L S AF V + + S E L L A G+ + L + LD+ Sbjct: 98 RKWDEATAVLVGDALQSLAFECVADPRAGSGEVRAELCLGLARAAGGQ--GMVLGQALDI 155 Query: 157 TEE--------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 E D + +++ KT L + +++AG + L Y +G+AFQ+ Sbjct: 156 AAETAGTPLSLDEITTLQAGKTGALIIWSGIAGAVMAGADPA---PLTRYAQAVGLAFQI 212 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 DD+LD G E GK +G+D GK T Sbjct: 213 ADDILDVEGCAEETGKAVGKDAAAGKATF 241 >gi|327300343|ref|XP_003234864.1| geranylgeranyl pyrophosphate synthetase [Trichophyton rubrum CBS 118892] gi|326462216|gb|EGD87669.1| geranylgeranyl pyrophosphate synthetase [Trichophyton rubrum CBS 118892] Length = 382 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 7/230 (3%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y + GK +R L A L+ ++ ++ + +HTA+LL DDV D S LRRG Sbjct: 75 YTVNQPGKDVRGQLIAAYNRWLQVPEESLAVITKVVVMLHTASLLIDDVEDSSHLRRGAP 134 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ QA + + KS EA+ L G+ L L Sbjct: 135 VAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMNLHRGQGMDLYWRDTLT 194 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEEDYL ++ +KT LF A+++ ++SV +G+ FQ+ DD L+ Sbjct: 195 CPTEEDYLEMVGNKTGGLFRLAIKLMQ----AESSVPIDCVPLVDLMGLMFQVCDDYLNL 250 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTINDGKI 262 K + ED GK + PVI + + + + N K ND ++ Sbjct: 251 SNPTYSKNKGLCEDLTEGKFSFPVIHSIRAQPENRQLINILKQKTNDNEV 300 >gi|119713545|gb|ABL97597.1| crtE geranylgeranyl diphosphate synthase [uncultured marine bacterium EB0_39F01] gi|161170296|gb|ABX59266.1| short chain isoprenyl diphosphate synthase IdsA [uncultured marine bacterium EB000_55B11] gi|297183824|gb|ADI19947.1| hypothetical protein [uncultured marine bacterium EB000_55B11] Length = 335 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 111/214 (51%), Gaps = 11/214 (5%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L + V+ LIL R+ + + + + + GK LR + + +A + E +L A Sbjct: 23 LPSVNHVHELILNRLENVDASLSEAAFFHFKTPGKMLRAKMAIQSASLAEIDISTSLLWA 82 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----T 124 A+E +H A+L+HDD+ D RRG+ + + +G T++ +GD+L++ +F + E + Sbjct: 83 GAVEVLHNASLIHDDICDGDKQRRGRESIWVKFGRDTALTLGDWLIALSFELASEAAEMS 142 Query: 125 KSQEALEALSLVACTLAEGELRQLSL--SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + + L+ T G+ + +++ DV YL + KTA L +A + +L Sbjct: 143 NTPRLVGVLARHMATTTAGQAMEFGWNSTQSWDV----YLKIAADKTAPLLTAPIHGVTL 198 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 ++G + + A+ Y +LG A+Q+ +D+ +++G Sbjct: 199 MSGT-SGLGFAISGYFCDLGKAYQIANDIQNFKG 231 >gi|302869226|ref|YP_003837863.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] gi|302572085|gb|ADL48287.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] Length = 355 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 36/242 (14%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNH------VLLACAIEFIHTATLLHDDVVD 86 V++ + +GGKR+RP+ +RG V+ A ++E H L+HDD+VD Sbjct: 43 AVRWFVLAGGKRMRPLFC-----YWGWRGFGGPDAAPIVVAAASLELFHAFALIHDDIVD 97 Query: 87 DSALRRGKV----------------AARLVWGNQTSVLVGDFLLS---QAF--CMVIETK 125 S RRG + +G Q +VL GD + Q F C + + Sbjct: 98 RSDRRRGAPTLHRFFAELHAASGWPGDPVAYGRQAAVLCGDLCATWSAQMFHGCGLPPER 157 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIA 184 + L+ + + GE + + D + + L V++ KTA + +++ + +A Sbjct: 158 LRRGHVLLARMRSEVIAGEYLDV-VGAAGDGSVANALTVVRLKTARYTVTRPVQIGAALA 216 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G AL +G LG AFQL DD+L G+ + GK+ +D R GKPT V+LA R Sbjct: 217 GAAPEEVAALAGFGDPLGDAFQLRDDLLGVFGDPSVTGKSNLDDLREGKPT--VLLALAR 274 Query: 245 GT 246 + Sbjct: 275 AS 276 >gi|184201140|ref|YP_001855347.1| polyprenyl synthase [Kocuria rhizophila DC2201] gi|183581370|dbj|BAG29841.1| polyprenyl synthase [Kocuria rhizophila DC2201] Length = 370 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 92/353 (26%), Positives = 141/353 (39%), Gaps = 41/353 (11%) Query: 5 EDLTLKDMEKVNFLILKR-----ICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALML 57 EDL D F ++R I D + D V L GGKRLR L A Sbjct: 20 EDL---DARIRGFFAVEREHVTAISPDATRLVDAVGQLT-EGGKRLRARLCHWGWRAAGG 75 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV---------W------- 101 E D V A ++E TA L+HDD++D S RRG+ + V W Sbjct: 76 EAGSDVVVAAAASLELFQTAALIHDDILDRSDTRRGRPSVHRVFEALHRESGWAADPAHF 135 Query: 102 GNQTSVLVGDFLLS-------QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 G +VL GD LS A V A E S + + G+ + Sbjct: 136 GVSAAVLTGDMSLSFAEQLFADAAARVAPQAGARAREIFSTMRTEVMAGQYLDIHAEVAP 195 Query: 155 DVTE-----EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 E E + V++ K+A + + + +AG + +A ++ + LG AFQL Sbjct: 196 PAAEPARQLERAMTVLRYKSAKYSVEHPVAIGAALAGADEAFLRACAAFTLPLGEAFQLR 255 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DDVL G+ GK G+D R GK T V L +R T ++ + +S + ++ ++ Sbjct: 256 DDVLGVFGDPETTGKPAGDDVREGKRTALVALCEERATPSQRAWLESVLGRADLAGTDVA 315 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS-LMEVVDFCLQR 320 + +M A +E + A L LP ++ L + D ++R Sbjct: 316 RVRELMHSTGAHERSEQLIAQLVRDADAGLAALPTGPVPRAGLQALADAAVRR 368 >gi|89074633|ref|ZP_01161098.1| Dimethylallyltransferase; Geranyltranstransferase [Photobacterium sp. SKA34] gi|89049571|gb|EAR55131.1| Dimethylallyltransferase; Geranyltranstransferase [Photobacterium sp. SKA34] Length = 298 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 11/202 (5%) Query: 31 PDVVKYLIF---SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 P + YL + SGG + R + TA+ L + LLA +E +H A+L+HDDV D Sbjct: 36 PVTLSYLRYHQQSGGSQRRAKICYITAVSLGLNTNTAKLLAVTVELLHNASLIHDDVQDK 95 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLVACTLAEGEL 145 RRG+ A + + ++ +GD L+ A+ + I T + L+A C + Sbjct: 96 DRQRRGQDALWVKASVEEAICLGDTLIIAAYHALSKINTPANSHLQA---TVCRRVMETI 152 Query: 146 R-QLS-LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 R Q+ LS L +TE+ Y + +K A L S ++E+ +L+AG + S+ +AL + + + Sbjct: 153 RGQMEDLSPQLPLTEQSYTLIATNKAAPLLSLSVELPALLAG-EPSLAKALSNAASSFAL 211 Query: 204 AFQLVDDVLDYRGEVNEMGKNI 225 A+Q DD+ D + NI Sbjct: 212 AYQFYDDLCDQAQDAINQEPNI 233 >gi|302868959|ref|YP_003837596.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] gi|302571818|gb|ADL48020.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] Length = 360 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 74/256 (28%), Positives = 109/256 (42%), Gaps = 61/256 (23%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG------DNHVLLACAIEFIHTATLLHDD 83 + + ++ + GGKRLRP YRG D V A+EF+ + L+HDD Sbjct: 44 VAEAIEAFVLGGGKRLRPAFG-----YWGYRGAGGVDSDQVVATLAALEFVQASALIHDD 98 Query: 84 VVDDSALRRG------KVAAR---LVWG-------NQTSVLVGDFLLSQAFCMVIETKSQ 127 ++D S RRG + AAR WG + ++L+GD C+V S Sbjct: 99 LMDRSDTRRGEPAMHRRFAARHRTAGWGGDADSFGDAAAILLGDL------CLVW---SD 149 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 E L + L T+A R + +VT YL V+ T +L+ ++ +A + Sbjct: 150 ELLHSSGLPPATVARA--RPVFDEMRTEVTVGQYLDVLTQATG---DTSLDRAAKVARYK 204 Query: 188 NS--------------------VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 ++ V A +YG+ LG AFQL DDVL G+ GK G+ Sbjct: 205 SAKYTVERPLLLGAALAGAPPEVHAAYSAYGLPLGEAFQLRDDVLGVFGDPERTGKPAGD 264 Query: 228 DFRNGKPTLPVILAFQ 243 D R GK T V A + Sbjct: 265 DLREGKRTYLVAAALE 280 >gi|157415864|ref|YP_001483120.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116] gi|157386828|gb|ABV53143.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116] gi|307748501|gb|ADN91771.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni M1] Length = 281 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 21/268 (7%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L++L + +EK L ++ S + + ++ +GGK R L L+ + N Sbjct: 3 LKELFIHHLEKN----LPKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLN 58 Query: 64 HVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 L +A A+EFIHT +L+HDD+ +D++ RRG + T++LVGD L ++AF + Sbjct: 59 QALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLV 118 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAV 171 + ++ ++ + L+ L + + + +D ED +LH KTA Sbjct: 119 LSHAHLKDEIK-IKLIKTLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHT--HKTAR 175 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L +AAL++ I + N + G+ LG+ FQ+ DD++D + GK D Sbjct: 176 LIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDTH- 234 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTIND 259 K + +L ++ K ++N D Sbjct: 235 -KNSFVNLLGLEQAIKTKENLLSECEQD 261 >gi|315504571|ref|YP_004083458.1| polyprenyl synthetase [Micromonospora sp. L5] gi|315411190|gb|ADU09307.1| Polyprenyl synthetase [Micromonospora sp. L5] Length = 360 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 74/256 (28%), Positives = 109/256 (42%), Gaps = 61/256 (23%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG------DNHVLLACAIEFIHTATLLHDD 83 + + ++ + GGKRLRP YRG D V A+EF+ + L+HDD Sbjct: 44 VAEAIEAFVLGGGKRLRPAFG-----YWGYRGAGGVDSDQVVATLAALEFVQASALIHDD 98 Query: 84 VVDDSALRRG------KVAAR---LVWG-------NQTSVLVGDFLLSQAFCMVIETKSQ 127 ++D S RRG + AAR WG + ++L+GD C+V S Sbjct: 99 LMDRSDTRRGEPAMHRRFAARHRTAGWGGDADSFGDAAAILLGDL------CLVW---SD 149 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 E L + L T+A R + +VT YL V+ T +L+ ++ +A + Sbjct: 150 ELLHSSGLPPATVARA--RPVFDEMRTEVTVGQYLDVLTQATG---DTSLDRAAKVARYK 204 Query: 188 NS--------------------VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 ++ V A +YG+ LG AFQL DDVL G+ GK G+ Sbjct: 205 SAKYTVERPLLLGAALAGAPPEVHAAYSAYGLPLGEAFQLRDDVLGVFGDPERTGKPAGD 264 Query: 228 DFRNGKPTLPVILAFQ 243 D R GK T V A + Sbjct: 265 DLREGKRTYLVAAALE 280 >gi|152967171|ref|YP_001362955.1| polyprenyl synthetase [Kineococcus radiotolerans SRS30216] gi|151361688|gb|ABS04691.1| Polyprenyl synthetase [Kineococcus radiotolerans SRS30216] Length = 365 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 82/300 (27%), Positives = 130/300 (43%), Gaps = 40/300 (13%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALMLEYRGDNHVLLACAIEFI 74 +L+ + D + D + L+ SGGKRLRP T L G V A ++E Sbjct: 33 VLREVSEDCAPVLDAISALL-SGGKRLRPAFCYWGFHGTGGELPDEG--IVTAAASLELF 89 Query: 75 HTATLLHDDVVDDSALRRGKVAA---------RLVW-------GNQTSVLVGDFLLSQAF 118 A L+HDDV+DDS RRG+ AA R W G +VL GD L + Sbjct: 90 QAAALIHDDVMDDSDTRRGQPAAHRRFEALHARSGWDGSRERFGLAGAVLAGDLCL--GW 147 Query: 119 CMVIETKSQEALEAL-------SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171 + ++++ A +AL +++ L G+ + + D D V +++ V Sbjct: 148 SDELFSRARLAPDALDRGRRIFNVMRTQLMGGQYLDMLEQASSDQRGTDGA-VDRARRVV 206 Query: 172 LFSAA-------LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 F +A L + +AG + +G+ LG AFQL DDVL G+ E GK Sbjct: 207 TFKSAKYSIEHPLLLGGSLAGASTDLLADYSRFGLALGEAFQLRDDVLGVFGDPAETGKP 266 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284 G+D R GK T+ + LA Q + + + ++ E ++ ++ + AL E Sbjct: 267 AGDDLREGKRTVLIGLAVQAADPTQAAEVRRLLGSPELDAEGVETLRQVLVDTGALSGVE 326 >gi|109897645|ref|YP_660900.1| polyprenyl synthetase [Pseudoalteromonas atlantica T6c] gi|109699926|gb|ABG39846.1| farnesyl-diphosphate synthase [Pseudoalteromonas atlantica T6c] Length = 296 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 16/238 (6%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 + ++ + + ++Y + GGKR+RP L A L + A A+E IH +L Sbjct: 22 IGKLGDHAPTLKNAMQYALLMGGKRMRPFLVYAVGEALGIEQSDLDAPALALECIHAYSL 81 Query: 80 LHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEA 132 +HDD+ LRRG + + ++L GD L + AF +++ + + + +E Sbjct: 82 VHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTLAFEIIVNYPLSDFANAQRIEL 141 Query: 133 LSLVACT-----LAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS-LIAG 185 + ++ + G+ L S +K + T+ + LH KT L +AA++++S L Sbjct: 142 VRILGQASGYDGMCGGQGIDLASTNKLITQTQLELLH--SKKTGALITAAVKMASVLCPS 199 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 V + + L+ Y +G+AFQ+ DD+LD G+ +GK G D K T P +L + Sbjct: 200 VSDESKSLLQQYASTIGLAFQVQDDILDVVGDSQTLGKPQGSDQEQNKSTYPALLGLE 257 >gi|85708529|ref|ZP_01039595.1| geranyltranstransferase [Erythrobacter sp. NAP1] gi|85690063|gb|EAQ30066.1| geranyltranstransferase [Erythrobacter sp. NAP1] Length = 304 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 12/238 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKR+RP+L ++TA + + A A+E IH +L+HDD+ Sbjct: 42 EAMRYAAMGGGKRVRPLLLVSTAELYGVDRTAALCAAAAVEAIHVYSLIHDDLPCMDDDD 101 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LR GK V+ + T+VL GD L + AF ++ ++++ S + TL + Sbjct: 102 LRHGKPTVHKVYDDATAVLAGDALHALAFEILADSQTSADPFVRSELIATLGKASGMGGM 161 Query: 150 LSKNLD---VTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + EE + +++ KT L +A++E+ +++ V R L++Y Sbjct: 162 AGGQMMDMVADEEGVEYDLRTITRLQQLKTGALLAASVEMGAILGKVAPEGRAHLRAYSR 221 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 ++G+AFQ+ DD+LD G+ ++ GK + +D GK T ++ + ++ + + Sbjct: 222 DIGLAFQIADDLLDVEGDADKAGKALRKDDEQGKQTFVTLMGVDKAREQARALVDQAV 279 >gi|315498417|ref|YP_004087221.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48] gi|315416429|gb|ADU13070.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48] Length = 303 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 17/230 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSA 89 + ++Y GKRLRP L T + + + ACA+E IH +L+H +DD Sbjct: 44 EAMRYAALGPGKRLRPFFALETGRLFDADSQAVLRAACALECIHAYSLVHDDLPCMDDDD 103 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE---------ALSLVACTL 140 +RRG++ + T+VL GD L + AF ++ + E AL+ A + Sbjct: 104 IRRGQLTVHRAYDEATAVLAGDALQTVAFEILASEDTHEDPRVRVELISRLALASGAQGM 163 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 A G++ L +S +L + + KT L A E+ +IA +L + Sbjct: 164 AGGQMIDLIGVSDDLG----GVARMQRMKTGALIVHAFEIPIIIADAPEKEANSLIHFAQ 219 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNI-GEDFRNGKPTLPVILAFQRGTKR 248 +LG+A+Q+ DD+LD G+ + +GK G+D GK +L R Sbjct: 220 DLGLAYQIADDLLDVEGDPDLLGKAAGGKDAAKGKTNFVTLLGLDEAKAR 269 >gi|269138336|ref|YP_003295036.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202] gi|267983996|gb|ACY83825.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202] gi|304558368|gb|ADM41032.1| Geranyltranstransferase [Edwardsiella tarda FL6-60] Length = 301 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 29/270 (10%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GGKRLRP L AT + A A+E IH +LLHDD+ L Sbjct: 36 AMRYGALLGGKRLRPYLVYATGGLFGCSPTALDAPAAAVECIHAYSLLHDDLPAMDDDDL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLVA-----CTL 140 RRG+ + +G ++L GD L + AF ++ + ++ L+ LS +A + Sbjct: 96 RRGQPTCHIKFGEAHAILAGDALQTLAFSILADGPMPGVADRDRLQMLSELAHASGVAGM 155 Query: 141 AEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS--- 196 G+ L +++ + + +H + KT L A+ + +L G ++ R+AL + Sbjct: 156 CGGQALDLEAEGRHVALAALEQIH--RHKTGALIRCAVRMGALAGG--DAGRRALPALDR 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y +G+AFQ+ DD+LD G+ ++ GK G D + K T P +L + ++ Sbjct: 212 YAAAIGLAFQVQDDILDVVGDSSKTGKRQGADQQLDKSTYPALLGLDQARQKAATLLDEA 271 Query: 257 IND-------GKISVENLKK--AFIIMREN 277 + + + LK +FI+ R+N Sbjct: 272 LQALAELEQRHNLDTQALKSLASFIVERDN 301 >gi|315504299|ref|YP_004083186.1| polyprenyl synthetase [Micromonospora sp. L5] gi|315410918|gb|ADU09035.1| Polyprenyl synthetase [Micromonospora sp. L5] Length = 355 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 36/242 (14%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNH------VLLACAIEFIHTATLLHDDVVD 86 V++ + +GGKR+RP+ +RG V+ A ++E H L+HDD+VD Sbjct: 43 AVRWFVLAGGKRMRPLFC-----YWGWRGFGGPDASPIVVAAASLELFHAFALIHDDIVD 97 Query: 87 DSALRRG---------KVAARLVW-------GNQTSVLVGDFLLS---QAF--CMVIETK 125 S RRG ++ A W G Q +VL GD + Q F C + + Sbjct: 98 RSDRRRGAPTLHRFFAELHAASGWPGDPAAYGRQAAVLCGDLCATWSAQMFHGCGLPPER 157 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIA 184 + L+ + + GE + + D + + L V++ KTA + +++ + +A Sbjct: 158 LRRGHVLLARMRSEVIAGEYLDV-VGAAGDGSVANALTVVRLKTARYTVTRPVQIGAALA 216 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G AL +G LG AFQL DD+L G+ + GK+ +D R GKPT V+LA R Sbjct: 217 GAAPEEVAALAGFGDPLGDAFQLRDDLLGVFGDPSVTGKSNLDDLREGKPT--VLLALAR 274 Query: 245 GT 246 + Sbjct: 275 AS 276 >gi|256752864|ref|ZP_05493702.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256748241|gb|EEU61307.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 168 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 63/99 (63%), Gaps = 6/99 (6%) Query: 26 DVEMIPDVV----KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 D+E P+++ +Y +F+GGKRLRP+L L++ +L + +ACAIE IHT +L+H Sbjct: 22 DIEEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIH 81 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 DD+ +D+ LRRGK V+G ++L GD LL+ + Sbjct: 82 DDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGY 120 >gi|288942267|ref|YP_003444507.1| polyprenyl synthetase [Allochromatium vinosum DSM 180] gi|288897639|gb|ADC63475.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180] Length = 289 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 76/255 (29%), Positives = 115/255 (45%), Gaps = 14/255 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVV--DDS 88 + V++ +F GG R+RP L LA A R AIE +H A+L+HDD+ DDS Sbjct: 29 EAVRHAVFPGGARVRPRLCLAVAAACGSRDYAAADAAGVAIELLHCASLVHDDLPCFDDS 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLV---ACTLAEG 143 LRRG + +G +VL GD L+ AF + + S E L L L + + G Sbjct: 89 PLRRGVPSVHRAFGEPLAVLAGDALIILAFEHLARVLADSPERLAPLLLTISRSVGMPHG 148 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + VT E+Y H ++KT LF+AA +L V + +A G +G Sbjct: 149 ITAGQAWECEPQVTVEEY-H--RAKTGSLFTAATAAGAL---VAGADAEAWSVVGDKIGE 202 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 A+Q+ DD+ D E+GK +G D +P+ L R + I+ Sbjct: 203 AYQVADDLRDVAASAQEVGKPVGRDAVLNRPSAAGELGIDGAIARLRGLVTGAIDAIPAC 262 Query: 264 VENLKKAFIIMRENR 278 + A ++M E+R Sbjct: 263 PGRDQFAEVLMAESR 277 >gi|86136864|ref|ZP_01055442.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. MED193] gi|85826188|gb|EAQ46385.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. MED193] Length = 287 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 17/251 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGK LR L L +A + + + A AIE IH +L+HDD+ LRRG Sbjct: 40 GGKMLRGFLVLESARLHGVDAEAALDAAVAIECIHAYSLVHDDLPCMDDDDLRRGLPTIH 99 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVA-----CTLAEGELRQLSL-S 151 W T+VL GD L + AF ++ ++K ALE + L+A + +G++ + + Sbjct: 100 KKWDEATAVLTGDALQTLAFDLLADSKFGPNALELIRLLARAAGRSGMVQGQMLDIDAET 159 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +T E + KT L + + V +IAG + +AL Y LG+AFQ+ DD+ Sbjct: 160 ASTPLTLEQITRLQDRKTGCLINWSATVGPVIAGDDS---RALWQYATALGLAFQIADDI 216 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK---STINDGKISVENLK 268 LD G+ ++GK + +D GK T +L + +R ++ + + + E LK Sbjct: 217 LDIEGDAEKVGKALRKDADAGKATFVSLLGLEPAKQRARDLIDEACAALAPYGEAGETLK 276 Query: 269 KA--FIIMREN 277 +A F+I R++ Sbjct: 277 QAAHFVIARDS 287 >gi|254394001|ref|ZP_05009090.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294810895|ref|ZP_06769538.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|326439472|ref|ZP_08214206.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|197707577|gb|EDY53389.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294323494|gb|EFG05137.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 368 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 118/286 (41%), Gaps = 29/286 (10%) Query: 28 EMIPDVVKYL---IFSGGKRLRPMLTLATALMLEYRGDNH--VLLACAIEFIHTATLLHD 82 +M P+V+ L + GGKRLRP+L GD V + A+E H L+HD Sbjct: 46 DMPPEVIGTLRDFVLRGGKRLRPLLCACGWYAAGGTGDPTAVVRVGAALELFHAFALVHD 105 Query: 83 DVVDDSALRRGKVAARLVWGNQ----------------TSVLVGDFLLSQAFCMVIETKS 126 D++D SA RRG+ A ++ +++L+GD + C ++ T Sbjct: 106 DLMDRSATRRGRPAVHRALADRYRSTRDHATAERLGVGSAILLGDLACVWS-CELLHTAP 164 Query: 127 QEALEALSLVACTLA------EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA-ALEV 179 + +L+ A G+ L + L V + KTA L Sbjct: 165 LTPRQFSALLPVVHAMRTEVMYGQYLDLLATGEPTADVRGPLRVARYKTATYTCERPLHA 224 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + +AG +V A +Y + LG AFQL DD+L G+ GK+ +D R GK T V Sbjct: 225 GAALAGGPEAVLDACTAYALPLGEAFQLRDDLLGVFGDPRATGKSRLDDLREGKHTALVA 284 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 LA +G ++ + D ++ + ++ A E+ Sbjct: 285 LALDQGDPGQRAELLRLVGDSELDERGAARVRALLTGTGARAGVEH 330 >gi|254389342|ref|ZP_05004570.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|197703057|gb|EDY48869.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 355 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 21/211 (9%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGK------VAARL----------VWGNQT 105 D V A A+E H L+HDD++DDSA RRG +A RL G T Sbjct: 73 DEVVSTAAALEMFHAFALIHDDIMDDSATRRGSPTVHRALADRLGAALDPDQAGQLGVST 132 Query: 106 SVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLAE---GELRQLSLSKNLDVTEEDY 161 ++LVGD L+ + ++ + L A L LV AE G+ ++ ++ Sbjct: 133 AILVGDLALTWSDELLYAPLTPHRLAAVLPLVTAMRAETVHGQYLDITSARRPGTDTSLA 192 Query: 162 LHVIKSKTAV-LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 L + + KTA L + + +AG + + L +Y + G AFQL DD+L G+ Sbjct: 193 LRIARYKTAAYTMERPLHIGAALAGARPELLAGLSAYALPAGEAFQLADDLLGVFGDPRR 252 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 GK +D R GK T+ V LA + T +++ Sbjct: 253 TGKPDLDDLRGGKHTVLVALAREHATPEQRH 283 >gi|68164585|gb|AAY87314.1| predicted geranylgeranyl diphosphate synthase [uncultured bacterium BAC17H8] Length = 341 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 9/226 (3%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 E ++ I++R+ E + + + S GK LR + L A L + A AIE Sbjct: 27 EIIHGFIIERMPKIGEPLSEAALHHFASPGKMLRAKMALRAADHLNVDRYAALHWAAAIE 86 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEAL 130 +H A+L+HDD+ D LRR + A V+G ++ +GD+L++ +F + E ++Q + Sbjct: 87 VLHNASLIHDDICDGDRLRRERPAVWSVYGRDVALTLGDWLVALSFELAAEAAQRAQTPM 146 Query: 131 --EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + L+ T +GE R+ + D + YL KTA L +A LE + +A + Sbjct: 147 LVKILATHMKTTTDGEAREFDVQPVRDW--DHYLKGAGDKTAPLLTAPLEGVAAMA-LHG 203 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRG--EVNEMGKNIGEDFRNG 232 + LG A+Q+ +D+L++ G N G ++G NG Sbjct: 204 GSAPIIGDCFRALGNAYQIANDILNFSGGDGANTCGSDLGRRAPNG 249 >gi|289547882|ref|YP_003472870.1| Geranyltranstransferase [Thermocrinis albus DSM 14484] gi|289181499|gb|ADC88743.1| Geranyltranstransferase [Thermocrinis albus DSM 14484] Length = 264 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 108/212 (50%), Gaps = 13/212 (6%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+ ++ + + Y GGKR+RP+L L ++ V++ CAIE IH +L+HDD+ Sbjct: 22 SEPLLLYEAMSYYPLQGGKRIRPLLLCGVCDALGGNVEDAVVVGCAIELIHNYSLIHDDL 81 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE 142 +D+ RRG + + +G ++L GD LL+ AF ++ + +E L+ L Sbjct: 82 PALDNDPQRRGLPSCHIAFGEDIALLAGDALLTLAFQVLSDVSQFNQVEPSDLL---LII 138 Query: 143 GELRQLSLSKN------LDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 E+ + + S+ +D+ D + KTA LF+A VS+ I + S+ + L+ Sbjct: 139 HEISRRAGSEGMVGGQVMDIRGIGDRREINLKKTAQLFAACF-VSAGIIAKKKSMLKDLE 197 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 G+ G+ FQ+ DD D G +G+++ + Sbjct: 198 KVGIRTGLLFQMCDDWKDKDGYFKLLGEDLAK 229 >gi|302557478|ref|ZP_07309820.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000] gi|302475096|gb|EFL38189.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000] Length = 360 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 126/269 (46%), Gaps = 35/269 (13%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNH------VLLACA-IEFIHTATLLHDDVVDDSAL 90 + GGKR+RP T A + GD VL ACA E +H + L+HDD++D S Sbjct: 46 VLRGGKRVRP--TFAWLGWIGAGGDPDDPVAPAVLRACAGFELLHASGLIHDDIIDASRT 103 Query: 91 RRGKVAARLVW----------------GNQTSVLVGDFLLSQAFCMV----IETKSQEAL 130 RRG AA +V+ G ++LVGD L + MV + +Q L Sbjct: 104 RRGHPAAHVVFAERHRMRRFSGDPGAFGAGAAILVGDLALVWSDVMVRASGLPADAQTRL 163 Query: 131 EAL-SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQN 188 + S V + G+L L + + + L V + KTA L+ + IAG Sbjct: 164 GPVWSAVRYEVMYGQLLDLISQASDEEGVDAALLVDQYKTASYTVERPLQFGAAIAGADA 223 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG--- 245 + A +++G ++GIAFQL DD+L G+ GK G+D R GK T+ + A +R Sbjct: 224 GLVDAYRAFGADIGIAFQLRDDLLGVFGDPAVTGKPSGDDLREGKRTVLLATALKRADAC 283 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIM 274 R F ++TI ++ ++L +A ++ Sbjct: 284 DPRAAAFLRATIGT-DLTGDDLARARAVL 311 >gi|170749228|ref|YP_001755488.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] gi|170655750|gb|ACB24805.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] Length = 289 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 20/223 (8%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN----HVLLACAIEFIHTATLLHDDV 84 ++ + ++Y +F GG R+RP L L+ A GD+ V A AIEF+H A+L+HDD+ Sbjct: 26 LLAEALRYAVFPGGHRIRPRLCLSVARAC---GDDDPAGSVAAAAAIEFLHCASLVHDDL 82 Query: 85 V--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-----A 137 DD+ +RR K + + +G +VL GD L+ AF + + + LV A Sbjct: 83 PCFDDAPMRRQKPSVHVAFGEPIAVLTGDALIVLAFETLARSVGRHPARLGRLVGLLGRA 142 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G + ++ DY ++KT LF+AA + AG + + + Sbjct: 143 AGSPSGIAAGQAWESEAHISLSDYQ---QAKTGALFAAATVAGAAAAGAEP---EPWRRL 196 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 G LG A+Q+ DD+ D E+GK G D G+P +L Sbjct: 197 GECLGEAYQVADDLRDVACRQEEIGKPAGRDATLGRPNAAALL 239 >gi|260574939|ref|ZP_05842941.1| Polyprenyl synthetase [Rhodobacter sp. SW2] gi|259022944|gb|EEW26238.1| Polyprenyl synthetase [Rhodobacter sp. SW2] Length = 295 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 16/234 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--D 86 + Y + GG R+RP + L+ A+ GD+ L A A+E IH A+L+HDD+ D Sbjct: 30 ALPYAVTPGGARIRPTILLSVAIAC---GDDRPGLSNAAAAALELIHCASLVHDDLPSFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 D+ +RRGK + +VL GD L+ AF ++ L L+ TLA+ Sbjct: 87 DADIRRGKPTIHKAFNEPLAVLTGDSLIILAFDVLARAAEDAPGRGLGLIR-TLAKRSGM 145 Query: 147 QLSLSKNLDVTEEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + E +++ +SKT LF AA + + AG + + G +G Sbjct: 146 PDGICAGQGWESEPTVNLSAYHRSKTGALFIAATCMGAQAAGQEP---EPWVELGSRIGE 202 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 AFQ+ DD+ D + +GK G+D + +P+ L +R ++ I Sbjct: 203 AFQVADDLRDALYDAETLGKPAGQDTVHARPSAVTELGVPGAIRRLRDILSGAI 256 >gi|61653256|gb|AAX48209.1| geranylgeranyl pyrophosphate synthase [uncultured proteobacterium DelRiverFos06H03] Length = 304 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 14/211 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDV--VD 86 +++ +FSGG R+RP L +A A GDN L A A+E +H A+L+HDD+ D Sbjct: 30 AMRHAVFSGGARIRPQLCMAVATAC---GDNAPHLTDAAAVALELMHCASLVHDDMPAFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-ACTLAEGEL 145 ++ RRG + ++L GD L+ A+ ++++ Q+ ++L+ T G Sbjct: 87 NADTRRGLPTVHKAFSEPLALLAGDGLIVMAYRVLLQAGVQQPDRLVALMDNLTAGVGLP 146 Query: 146 RQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + + + T D ++KT LF +A +L GV L Y LG A Sbjct: 147 HGIVAGQAWECETSADLGQYQRAKTGALFVSATCAGALSCGVAPEPWAFLGQY---LGEA 203 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +Q+ DD+ D + +GK G+D + +P+ Sbjct: 204 YQVADDIRDVIADAATLGKPAGQDTLHARPS 234 >gi|149924264|ref|ZP_01912637.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1] gi|149814889|gb|EDM74454.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1] Length = 394 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 10/219 (4%) Query: 43 KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102 K LRP L +AT L + + A +E H A L+HDDV D S +RRG G Sbjct: 60 KGLRPALCIATCRALGGNLEAALPTASVLELYHNAFLVHDDVEDRSHVRRGGPTLHAAHG 119 Query: 103 NQTSVLVGDFLLS---QAFCMVIE----TKSQEALEALSLVACTLAEGELRQLSLSK--N 153 +V VGD +L+ + IE + LEA++ ++ EG+ +L + Sbjct: 120 QAIAVNVGDGMLALTLRPLLANIERVGLGPALRILEAMAEMSERTVEGQAMELDWIRRNT 179 Query: 154 LDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 +++++DY+ ++ KT F +L A V + L+ + +L +AFQ+ DDVL Sbjct: 180 WELSDDDYIEMVVRKTGWYSFIIPTRCGALCARSDPKVCEQLERFARDLSVAFQIQDDVL 239 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + G +E+GK+ D GK TL ++ A + +++ Sbjct: 240 NLVGGADEIGKDARGDLWEGKRTLVLLHALRTAAPADRD 278 >gi|254427009|ref|ZP_05040716.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881] gi|196193178|gb|EDX88137.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881] Length = 307 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 14/240 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S + ++Y SGGKR+RP+L A + + A A+E IH +L+HDD+ Sbjct: 40 SAASRLSQAMRYAALSGGKRIRPLLVYGAAQLAGASAAQADVPAVAVELIHAYSLVHDDL 99 Query: 85 VDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA--CT- 139 LRRG+ + T++L GD L ++AF ++ + ++L+ C Sbjct: 100 PAMDDDDLRRGQATCHKAFDEATAILAGDTLHTRAFELLACHGDYRSDSRIALIQHLCQA 159 Query: 140 -----LAEGELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQ 192 +A G+++ L+ + V + +H +K T L +A+L++ A + ++ Sbjct: 160 AGVDGMAAGQMQDMLAQGQQQTVAALEEMHYLK--TGRLITASLQLGYFAAENDDPALLS 217 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L +G +G+AFQ+ DD+LD ++GK G D + K T P +L ++ +R + Sbjct: 218 NLTDFGDAIGLAFQIQDDILDITAATEQLGKPSGSDEKLQKSTFPSLLGLEQSQQRARQL 277 >gi|15920702|ref|NP_376371.1| isoprenyl diphosphate synthase [Sulfolobus tokodaii str. 7] gi|15621485|dbj|BAB65480.1| 283aa long hypothetical isoprenyl diphosphate synthase [Sulfolobus tokodaii str. 7] Length = 283 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 13/194 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 +V KY I GKR R LT L N A A E +H+A+L DD+VD +R Sbjct: 32 EVSKY-ILKDGKRFRGTLTFLFTEALNGDIKNAYKAALASEILHSASLALDDIVDYDIIR 90 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG +A ++ N+ + + ++L+ A +I T +EAL+ + A G L+ + S Sbjct: 91 RGGSSAWAIYTNRKVIFITNYLIPSALN-IISTYGEEALKISIQLWKDTAVGALKDIFGS 149 Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 + +YL I+ KT+ LF + ++S + ++ V + L G +GIA+QLVDD Sbjct: 150 PS------EYLSTIELKTSSLFKLSTMLASFASHREDLVEETL-DIGKYIGIAYQLVDDY 202 Query: 212 LD----YRGEVNEM 221 +D RGE+ E+ Sbjct: 203 IDCVKYERGELKEL 216 >gi|311741515|ref|ZP_07715339.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303685|gb|EFQ79764.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035] Length = 359 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 77/267 (28%), Positives = 112/267 (41%), Gaps = 40/267 (14%) Query: 13 EKVNFLILKR-----ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHV 65 E FL +R I + V ++ + GGKR+RP A + RG D Sbjct: 17 ELATFLDQRREQVAAIGAPVTKAVSFLESFVLDGGKRVRPTYAWA-GYLAAGRGEEDPAA 75 Query: 66 LL--ACAIEFIHTATLLHDDVVDDSALRRGKVAARL----------------VWGNQTSV 107 +L A ++EFI L+HDD++D S RRG +G ++ Sbjct: 76 MLRAAASLEFIQACALIHDDIIDASNTRRGNPTVHRGVEKLHRESEYLGDPEFFGTSVAI 135 Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSL---------VACTLAEGELRQLSLSKNLDVTE 158 LVGD L A M ++ L A +L + + G+L +SL + Sbjct: 136 LVGDLALVYAEDMFQDS----GLSAAALHRARSPWRGMRTEVIGGQLLDISLEAAGSESV 191 Query: 159 EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 E V + KTA L + + IAG + A + YG ++GIA+QL DD L G+ Sbjct: 192 ELANSVNRYKTAAYTIERPLHLGAAIAGASEELIAAFRGYGHDIGIAYQLRDDQLGVFGD 251 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQR 244 GK G+D R GK T + LA R Sbjct: 252 PAVTGKPAGDDLREGKRTELLALALHR 278 >gi|145223562|ref|YP_001134240.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK] gi|315443909|ref|YP_004076788.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] gi|145216048|gb|ABP45452.1| geranylgeranyl-diphosphate synthase [Mycobacterium gilvum PYR-GCK] gi|315262212|gb|ADT98953.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] Length = 359 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 82/326 (25%), Positives = 139/326 (42%), Gaps = 29/326 (8%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVL-LACAIEFIHTATLL 80 I +D ++ + ++ + GGKRLRP + + H++ L A+E +H L+ Sbjct: 33 IGTDYAVLTEALEEFVLRGGKRLRPAFAYWGFRAVAGTEPEPHIMRLFSALELLHACALV 92 Query: 81 HDDVVDDSALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQAFCMVIET 124 HDD++D SA RRG + W G ++L+GD L A ++ E Sbjct: 93 HDDLIDASATRRGLPTVHRIFSERHRSNNWLGSSDQFGLSAAILLGDLSLVWADDIIAEA 152 Query: 125 KSQEALE-----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALE 178 +A + + + G+ + + T L V KTA S L+ Sbjct: 153 PIDDAAHRRVQRVWAAIRTEVLGGQYLDIVNEASGSETVASALTVNIYKTASYTISRPLQ 212 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + AG + + +A G +LG+AFQL DDVL G+ GK G+D R+GK T+ + Sbjct: 213 LGAAAAGDRPEILEAFHELGTSLGVAFQLRDDVLGVYGDPAVTGKPSGDDLRSGKRTVLL 272 Query: 239 ILAFQ---RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 A + R +++I +S +K+ +++ AL E R + ++A Sbjct: 273 AEAVELADRHDPPAAQLLRTSIGT-DLSDAQVKELCLVIEAVGALAAVESRIDTLTRRAL 331 Query: 296 DSLRCLP-DSSWKKSLMEVVDFCLQR 320 D + P D K L E+ R Sbjct: 332 DIMNSAPIDVRAKAGLAELARLAANR 357 >gi|7416783|dbj|BAA94032.1| phytoene synthase [Rubrivivax gelatinosus] Length = 310 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 10/209 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDN----HVLLACAIEFIHTATLLHDDVV--D 86 +++ +F GG R+RP L +A A+ GD A AIE IH A+L+HDD+ D Sbjct: 30 AIRHAVFPGGARIRPQLCIAVAMA---NGDTDPALADAAASAIELIHCASLVHDDLPCFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 D+ RRG+ + +G + +VL GD L+ AF + E ++ V T+A G Sbjct: 87 DAPTRRGQPSVHKAYGERLAVLAGDALIVTAF-QTLGAAGGRHPERMAHVLQTVARGVGT 145 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 L + E + + + A + ++ A + ++ G LG A+Q Sbjct: 146 PLGIIAGQAWECEPRVALSDYQRAKTGALFAAATAAGAQASGGDGETWRALGDWLGEAYQ 205 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + DDV D + ++GK +G D G+P+ Sbjct: 206 VADDVRDALADPEQLGKPVGRDVALGRPS 234 >gi|21219102|ref|NP_624881.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)] gi|14716951|emb|CAC44181.1| putative polyprenyl synthetase [Streptomyces coelicolor A3(2)] Length = 357 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 77/289 (26%), Positives = 123/289 (42%), Gaps = 26/289 (8%) Query: 31 PDVV---KYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVD 86 PD V + L GGKR+R +L A ++ D A +IE + T L+HDD++D Sbjct: 41 PDCVGLLRDLSLRGGKRMRVVLLHEAARLVTAEPVDGLDAAALSIELLQTHGLVHDDLID 100 Query: 87 DSALRRG----------KVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALE 131 DSA RRG + R +VL GD L+ + +++E + Q +E Sbjct: 101 DSATRRGGPTTYYAYRERFPGRPRAALGLTVLAGDLALALSLRVLLEAELPVAVRQAMVE 160 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS--AALEVSSLIAGVQNS 189 + A G++ L V + + LH + +S A + + L AG + Sbjct: 161 VQTRAATDTFVGQIADLERDFTAAVPDAEMLHDVADHKTARYSVLAPMRLGLLAAGAEPG 220 Query: 190 VRQ-ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + L+ Y +GI Q+ DD LD G+ GK G D R G+ T V+ + Sbjct: 221 AHEDELRRYARLVGICGQMRDDWLDLFGDEGTTGKPTGGDIREGRHTYTVVRLLSAVSGS 280 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA--YSYGQKAK 295 E++F + D + E + + I RA V RA Y ++A+ Sbjct: 281 ERDFVDRALGDPACTPETIAEIRAI--GERAGVADRMRADMRQYAERAR 327 >gi|182434309|ref|YP_001822028.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462825|dbj|BAG17345.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 349 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 8/187 (4%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 VL A A+E IHT +L+HDD++D RR + +G +VL GD L + A + E Sbjct: 83 VLGAVAVELIHTFSLIHDDIMDGDETRRRRPTLWKAYGTGPAVLAGDALFALAVSTLAEA 142 Query: 125 KSQEALEALSLVACTLAE---GELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 A+ +A L + G+ + L + V +Y + KT L A Sbjct: 143 PGPGGAAAVRQLAGALGDLVHGQAQDLLFESRPWTGPGAVLPHEYRSMATHKTGSLLGCA 202 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + +++AG S +AL G ++G+AFQ VDD+L G+ GK + D R K T Sbjct: 203 AALGAVLAGAPASTVEALDLAGRHVGVAFQAVDDLLGIWGDPQVTGKPVHSDLRRLKKTY 262 Query: 237 PVILAFQ 243 PV+ A Sbjct: 263 PVLAALS 269 >gi|159046054|ref|YP_001534848.1| geranylgeranyl pyrophosphate synthetase [Dinoroseobacter shibae DFL 12] gi|157913814|gb|ABV95247.1| geranylgeranyl pyrophosphate synthetase [Dinoroseobacter shibae DFL 12] Length = 292 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 108/247 (43%), Gaps = 10/247 (4%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHT 76 LI R S + ++Y + GG R+RP + L A ACA IE IH Sbjct: 15 LIRSRAGSCPPKLASALEYAVKPGGARIRPTICLNVARACGDDAPGLTDAACAAIELIHC 74 Query: 77 ATLLHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 +L+HDD+ D++ +RRGK W +VL GD L+ AF + +AL A + Sbjct: 75 GSLVHDDLPAFDNADVRRGKPTVHKAWSEPLAVLTGDTLIIMAFEQIALAARSDALRAAT 134 Query: 135 LVACTLA--EGELRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L LA G + + + + D ++KT LF+AA + + AG Sbjct: 135 LT-LELARYSGMPHGICAGQAWESEAQVDLSAYHRAKTGALFTAATRMGAAAAGADP--- 190 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A G +G AFQ+ DD+ D + +GK G+D N +P L Q KR + Sbjct: 191 EAWTELGARIGEAFQVADDLRDALYDEETLGKPAGQDVVNARPNAVSELGVQGAIKRLDD 250 Query: 252 FWKSTIN 258 I+ Sbjct: 251 ILSGAIS 257 >gi|295397723|ref|ZP_06807795.1| geranyltranstransferase [Aerococcus viridans ATCC 11563] gi|294974052|gb|EFG49807.1| geranyltranstransferase [Aerococcus viridans ATCC 11563] Length = 297 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 10/216 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML LAT L + A A+E+IHT +L+HDD+ +D+ RRG Sbjct: 39 YSLNTGGKRIRPMLLLATLKALNVDIQIGLNTAVALEYIHTYSLIHDDLPAMDNDDYRRG 98 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEALSLVACTLAEGELRQLSLSK 152 K+ + T++L GD LL+ +F ++ ++K Q ++L+A + + Sbjct: 99 KLTNHKAFDEATAILAGDSLLTDSFALIANDSKIQNMQTKVNLIAELSKAAGSNGMIAGQ 158 Query: 153 NLDVTEED-------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 LDV E + K KT L A+ IA + V L + GIA+ Sbjct: 159 ILDVDSEGKQINLRTLQDIHKHKTGELIRYAVFAGGQIAQASSEVATLLDDFAWAYGIAY 218 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 Q+ +D+ + GK D K T P I+ Sbjct: 219 QIQNDLQEVMWTDEARGKLNHSDAELDKNTYPSIMG 254 >gi|326774821|ref|ZP_08234086.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1] gi|326655154|gb|EGE40000.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1] Length = 349 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 8/187 (4%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 VL A A+E IHT +L+HDD++D RR + +G +VL GD L + A + E Sbjct: 83 VLGAVAVELIHTFSLIHDDIMDGDETRRRRPTLWKAYGTGPAVLAGDALFALAVSTLAEA 142 Query: 125 KSQEALEALSLVACTLAE---GELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 A+ +A L + G+ + L + V +Y + KT L A Sbjct: 143 PGPGGAAAVRQLAGALGDLVHGQAQDLLFESRPWTGPGAVLPHEYRSMATHKTGSLLGCA 202 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + +++AG S +AL G ++G+AFQ VDD+L G+ GK + D R K T Sbjct: 203 AALGAVLAGAPASTVEALDLAGRHVGVAFQAVDDLLGIWGDPQVTGKPVHSDLRRLKKTY 262 Query: 237 PVILAFQ 243 PV+ A Sbjct: 263 PVLAALS 269 >gi|84515006|ref|ZP_01002369.1| Geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis SKA53] gi|84511165|gb|EAQ07619.1| Geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis SKA53] Length = 293 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 19/252 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIEFIHTATLLHDDVV--D 86 + Y + GG R+RP + ++ A+ GD+ L A A+E +H A+L+HDD+ D Sbjct: 30 ALNYAVTPGGARIRPTILMSVAMAC---GDDRPALTNAAAAALELVHCASLVHDDLPCFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-TLAEGEL 145 D+ +RRGK A + +VL GD L+ F ++ A++L+ G Sbjct: 87 DADMRRGKPALHRAFSEPLAVLAGDSLIIMGFHLLARAAGDAPARAITLLDILGTRTGMP 146 Query: 146 RQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + + + + D ++KT LF AA ++ ++ AG + + G +G A Sbjct: 147 FGICAGQGWESESQIDLSAYHQAKTGALFIAATQMGAVAAGQEA---EPWAELGARIGEA 203 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-----D 259 FQ+ DD+ D + +GK G+D +G+P Q KR + I+ Sbjct: 204 FQVADDLRDALCDDATLGKPAGQDDLHGRPNAVAAYGVQGAVKRFDDILGGAISSIPACP 263 Query: 260 GKISVENLKKAF 271 G+ ++ + +A+ Sbjct: 264 GEAALAQMVRAY 275 >gi|29893480|gb|AAO93113.1| geranylgeranyl pyrophosphate synthetase [Rubrivivax gelatinosus] Length = 310 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 10/209 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDN----HVLLACAIEFIHTATLLHDDVV--D 86 +++ +F GG R+RP L +A A+ GD A AIE IH A+L+HDD+ D Sbjct: 30 AIRHAVFPGGARIRPQLCIAVAMA---NGDTDPALADAAASAIELIHCASLVHDDLPCFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 D+ RRG+ + +G + +VL GD L+ AF + E ++ V T+A G Sbjct: 87 DAPTRRGQPSVHKAYGERLAVLAGDALIVTAF-QTLGAAGGRHPERMAHVLQTVARGVGT 145 Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 L + E + + + A + ++ A + ++ G LG A+Q Sbjct: 146 PLGIIAGQAWECEPRVALSDYQRAKTGALFAAATAAGAQASGGDGETWRALGDWLGEAYQ 205 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + DDV D + ++GK +G D G+P+ Sbjct: 206 VADDVRDALADPEQLGKPVGRDVALGRPS 234 >gi|317125086|ref|YP_004099198.1| polyprenyl synthetase [Intrasporangium calvum DSM 43043] gi|315589174|gb|ADU48471.1| Polyprenyl synthetase [Intrasporangium calvum DSM 43043] Length = 368 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 79/273 (28%), Positives = 115/273 (42%), Gaps = 40/273 (14%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG------DNHVLLACAIEF 73 L I D+ + D V L+ SGGK LR A+ L YR D V L+ ++EF Sbjct: 29 LAEIGDDIAPLVDSVSRLL-SGGKGLR-----ASFLYWGYRAAGAADSDALVRLSASMEF 82 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQ- 116 A LLHDDV+D S RRG +A W G ++L GD L+ Sbjct: 83 FQAAALLHDDVMDRSDTRRGMPSAHRAVADLHRSRGWAGDDARFGEGAAILAGDLCLTWC 142 Query: 117 ----AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK------NLDVTEEDYLHVIK 166 + C + A L+ L G+ L S +L+ +VI+ Sbjct: 143 DELFSTCGLPAEDLARGRGAFDLMRTQLMGGQFLDLLESARGWDGLDLEARIASARNVIR 202 Query: 167 SKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 K+A L + + + G + L +YG+ LG AFQL DD+L G+ GK Sbjct: 203 YKSAKYTIEHPLLIGARVGGAPEAALGDLSAYGLALGEAFQLRDDLLGVYGDPEATGKPA 262 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 G+D R GK T+ V LA +++ +S + Sbjct: 263 GDDLREGKRTVLVALALDLAGDADRDVVESLLG 295 >gi|134101716|ref|YP_001107377.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] gi|291003113|ref|ZP_06561086.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] gi|133914339|emb|CAM04452.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] Length = 368 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 34/242 (14%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGKV 95 +GGKR+RP D+ ++ A A+E +H+ L+HDD++D S RRG Sbjct: 59 FLAGGKRIRPAFCYWGWRGAGGGADDEGVIGAAAALELLHSFALVHDDIIDASDTRRGAP 118 Query: 96 A----------------ARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEALEALSLVA 137 + + ++G ++L+GD L+ M+ + ++ EA LVA Sbjct: 119 SLHRQHAELHRRSGGRGSSELFGTSIALLLGDLCLAWFHDMLATSGLPAERIREARPLVA 178 Query: 138 CTLAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAA-------LEVSSLIAGVQN 188 +L E L L + LDV E+ V +S T + + A L + ++AG Sbjct: 179 HSLTE-----LVLGQYLDVAEQACSRHSVSRSYTVIHYKTAKYTIERPLHLGGVLAGASP 233 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 ++ + +Y M LG AFQL DDVL G+ GK + +D R K T+ + A +R + Sbjct: 234 ALLGSYTAYAMPLGEAFQLRDDVLGAFGDPAVTGKPVADDLRTRKATVLLATARERASAA 293 Query: 249 EK 250 ++ Sbjct: 294 QE 295 >gi|238918995|ref|YP_002932509.1| polyprenyl synthetase, [Edwardsiella ictaluri 93-146] gi|238868563|gb|ACR68274.1| polyprenyl synthetase, putative [Edwardsiella ictaluri 93-146] Length = 301 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 29/270 (10%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y GGKRLRP L AT + A A+E IH +LLHDD+ L Sbjct: 36 AMRYGALLGGKRLRPYLVYATGSLFGCSPTALDAPAAAVECIHAYSLLHDDLPAMDDDDL 95 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLVACTLAEGEL 145 RRG+ + +G ++L GD L + AF ++ + + ++ L+ LS +A A G + Sbjct: 96 RRGQPTCHIKFGEAHAILAGDALQTLAFSILADGQMPGVTDRDRLQMLSELA--HASG-V 152 Query: 146 RQLSLSKNLDVTEEDYLHVI--------KSKTAVLFSAALEVSSLIAGVQN-SVRQALKS 196 + + LD+ E + HV + KT L A+ + +L G + L Sbjct: 153 AGMCGGQALDL-EAEGRHVALAALEQIHRHKTGALIRCAVRMGALAGGAPGRNALPVLDR 211 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 Y +G+AFQ+ DD+LD G+ ++ GK G D + K T P +L + ++ Sbjct: 212 YAAAIGLAFQVQDDILDVVGDSSKTGKRQGADQQLDKSTYPALLGLDQARQKAATLLDEA 271 Query: 257 IND-------GKISVENLKK--AFIIMREN 277 + + + LK +FI+ R+N Sbjct: 272 LQALAELEQCHNLDTQALKSLASFIVERDN 301 >gi|209525923|ref|ZP_03274457.1| Polyprenyl synthetase [Arthrospira maxima CS-328] gi|209493600|gb|EDZ93921.1| Polyprenyl synthetase [Arthrospira maxima CS-328] Length = 177 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 3/116 (2%) Query: 35 KYLIFSGGKRLRP--MLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVDDSALR 91 ++L GKR+RP +L ++ A M ++ H LA E IHTA+L+HDDVVD+S LR Sbjct: 38 EHLFSVQGKRVRPAIVLLISRATMPDHEIIPKHRRLAEITEMIHTASLVHDDVVDESELR 97 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 RG ++ N+ +VL GDFL +Q+ + + E ++ LS V LAEGE++Q Sbjct: 98 RGVPTVHSLFNNRVAVLAGDFLFAQSSWYLANLDNLEVVKLLSQVIMDLAEGEIQQ 153 >gi|153799383|gb|ABS50454.1| NapT7 [Streptomyces aculeolatus] Length = 357 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 74/253 (29%), Positives = 110/253 (43%), Gaps = 57/253 (22%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACA-IEFIHTATLLHDDVVDDSA 89 D + L+ SGGKR+RP + L GD ++ A A +E +H + L+HDD++D+SA Sbjct: 57 DALTDLVTSGGKRVRPTFCITGYLAAGGDAGDPGIVAAAAGLEMLHVSALIHDDILDNSA 116 Query: 90 LRRGKVAARLVWGN----------------QTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 RRGK ++G+ +L+G+ L + +V + E Sbjct: 117 QRRGKPTIHTLYGDLHDSHGWRGESRRFGEGIGILIGNLALVYSQELVCQAPPAVLAEWH 176 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA--------- 184 L C+ ++++ + LDV A FSA E+S L+A Sbjct: 177 RL--CS-------EVNIGQCLDVC-----------AAAEFSADPELSRLVALIKSGRYTI 216 Query: 185 ------GVQNSVRQALKS----YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 G + R L + YG +G AFQL DD+LD G+ E GK G DF K Sbjct: 217 HRPLVMGANAASRPDLAAAYVEYGEAVGEAFQLRDDLLDAFGDSTETGKPTGLDFTQHKM 276 Query: 235 TLPVILAFQRGTK 247 TL + A QR T Sbjct: 277 TLLLGWAMQRDTH 289 >gi|195977755|ref|YP_002122999.1| geranyltranstransferase LepA [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974460|gb|ACG61986.1| geranyltranstransferase LepA [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 289 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 12/193 (6%) Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 D H +A AIE IHT +L+HDD+ +D+ RRG++ + + T++L GD L F Sbjct: 58 DAHYAIAAAIEMIHTGSLIHDDLPAMDNDDYRRGRLTSHKQFDEATAILAGDSLFLDPFA 117 Query: 120 MVIETKSQ-----EALEALSLVACT--LAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAV 171 ++ + ++ SL + T + G+L + + L ++ E +H +KT Sbjct: 118 LIAGADLPADLLVQLIQQFSLASGTFGMVGGQLLDMKGEQQLLNIQELSDIHA--NKTGK 175 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L + + +IA V L G +G AFQ+ DD+LD +E+GK +D Sbjct: 176 LLTLPFVAAGIIAEQSADVLSCLWEAGRLVGQAFQIRDDILDVTASFDELGKTPQKDLAA 235 Query: 232 GKPTLPVILAFQR 244 K T P +L +R Sbjct: 236 DKSTYPSLLGLER 248 >gi|296211695|ref|XP_002752610.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Callithrix jacchus] Length = 261 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 8/174 (4%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNHV 65 TL M L + + S E+ ++ +Y GK RP++ +A A + + HV Sbjct: 75 TLGSMSHRETLFQELLISTSEL-KEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHV 133 Query: 66 -----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 134 QASQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIA 193 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 + + + L+ V L GE QL +N + YL KTA L + Sbjct: 194 LARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIA 247 >gi|145595766|ref|YP_001160063.1| polyprenyl synthetase [Salinispora tropica CNB-440] gi|145305103|gb|ABP55685.1| Polyprenyl synthetase [Salinispora tropica CNB-440] Length = 360 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 115/280 (41%), Gaps = 66/280 (23%) Query: 11 DMEKVNFLILKRIC---SDVEMIP--DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D +FL+ +R D + P D V+ + GGKRLRP YRG + Sbjct: 20 DKALADFLVTRRAWMTDVDASLAPLADAVEAFVLGGGKRLRPAFA-----YWGYRGAGGI 74 Query: 66 ------LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ--------------- 104 A+EF+ + L+HDD++D S RRG+ A L + + Sbjct: 75 DTEQVATALAALEFVQASALIHDDLIDRSDTRRGEPAVHLRFTARHRSAGWDGDAAGFGD 134 Query: 105 -TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163 ++L+GD C+V S E L + L T+A R + +VT YL Sbjct: 135 AAAILLGDL------CLVW---SDELLHSAGLDPHTVARA--RPIFDQMRTEVTVGQYLD 183 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNS--------------------VRQALKSYGMNLGI 203 V+ T ++E + +A +++ + A +YG+ LG Sbjct: 184 VLTQATG---DTSVERAGKVARYKSAKYTVERPLLLGAALADATPEIHAAYSAYGLPLGE 240 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AFQL DDVL G+ + GK G+D R GK T V A + Sbjct: 241 AFQLRDDVLGIFGDPAQTGKPAGDDLREGKRTYLVAAALE 280 >gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii] gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii] Length = 328 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 21/221 (9%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 S G+ + ++ +A ++ D+ + ACA+E I T+T + DD+ +D++ LR GK Sbjct: 72 LSQGRLMCAIVCIAACELVGGSQDDAMPGACAVEMIKTSTCVQDDLPSIDNAELRDGKPT 131 Query: 97 ARLVWGNQTSVLVGDFLLSQAF-------------CMVIETKSQEALEALSLVACTLAEG 143 +G T++ G LL F MV E A+ + L+A + Sbjct: 132 VHCAFGIPTALFAGTALLVLGFEHLAAHYRGDTAARMVGEVS--RAVGSTGLLAGQAVDM 189 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 ++ + L+ E +LH KT+ L A+L + ++ G + +AL++YG G+ Sbjct: 190 GIQNAGRAVELETLEFVHLH----KTSALLEASLVIGAIAGGASDQDIEALRAYGRVTGL 245 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +Q+VDD+ D E+GK G+D GK T IL + Sbjct: 246 LYQIVDDIADATKTTEELGKVAGQDAMTGKSTYSTILGVDK 286 >gi|315452919|ref|YP_004073189.1| geranyltranstransferase [Helicobacter felis ATCC 49179] gi|315131971|emb|CBY82599.1| geranyltranstransferase [Helicobacter felis ATCC 49179] Length = 296 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 22/210 (10%) Query: 40 SGGKRLRPMLTLATALMLEYRGDN-HVL--LACAIEFIHTATLLHDDV--VDDSALRRGK 94 +GGKR RP L LA E + + H +A A+E +HT +L+HDD+ +D++ RR Sbjct: 46 NGGKRFRPKLFLAVLCAFEEKIETIHACFPIALALEVLHTYSLIHDDLPCMDNADTRRYH 105 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE-GELRQLSLSKN 153 + T+ LVGD L + AF ++ + L+ +SL+ TLA+ G + + L + Sbjct: 106 PTLHKSYDETTATLVGDGLNTYAFELLATNSLPDRLK-ISLIT-TLAQCGGIGGMVLGQA 163 Query: 154 LDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIA--GVQNSVRQALKSYGMNLG 202 LD E + LH +K TA L +A+L++ +LI ++ + +L ++G+ LG Sbjct: 164 LDCHFEHQTLNLQQLETLHTLK--TAKLIAASLKMGALIVCDSLETDISHSLFTFGLKLG 221 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGED-FRN 231 + FQ+ DD++D E GK+ D F+N Sbjct: 222 LFFQVRDDIIDRTQSPEESGKSTQLDTFKN 251 >gi|90415703|ref|ZP_01223637.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [marine gamma proteobacterium HTCC2207] gi|90333026|gb|EAS48196.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [marine gamma proteobacterium HTCC2207] Length = 339 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 134/280 (47%), Gaps = 28/280 (10%) Query: 18 LILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 L+ KR D + + +Y + GK R L L + + L +++ A A E +H Sbjct: 25 LLYKREMPDAQSTLAPAARYHFKNPGKSFRAQLALTSGVSLGLNTQDNLHWAAACELLHN 84 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 A+L+HDD+ D S RRG+ + +G ++ +GD+++++AF E ++ AL LV Sbjct: 85 ASLIHDDISDASTHRRGQESIHQHFGADMALCLGDWMVAKAF----ELGARNALYGGKLV 140 Query: 137 ACTLAEGELRQLSLSKNLDVTE------EDYLHVIKSKTAVLFSAALEVSSLIAGVQ--- 187 TL +++ + D+T+ +D+ + K KTA L A ++ +++ AG+ Sbjct: 141 --TLLAQAMQETCSGQISDITQRECANLDDWQRIAKGKTAPLLIAPIKGAAIAAGLNAEQ 198 Query: 188 ----NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 N+ Q+L+ G+A+Q +D+ D D KP L V L Q Sbjct: 199 NEKLNAELQSLEKLVGYCGLAYQGRNDIDDIIPSSRR-----SSDLDGRKPNLVVSLFAQ 253 Query: 244 RG-TKREKNFWKSTINDGKIS--VENLKKAFIIMRENRAL 280 +G + E N W + + K+S + + + +I++ N+++ Sbjct: 254 QGPSADEFNLWYQSDDLSKLSQWQKRIASSDVILQANQSV 293 >gi|315931387|gb|EFV10356.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 327] Length = 281 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 17/232 (7%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 +GGK R L L+ + N L +A A+EFIHT +L+HDD+ +D++ RRG Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 + T++LVGD L ++AF ++ ++ ++ + L+ L + + + +D Sbjct: 95 LHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIK-IKLIKTLAFNTGLNGMVIGQAIDC 153 Query: 157 TEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 ED +LH KTA L +AAL++ I + N + G+ LG+ FQ+ Sbjct: 154 FFEDKRLSLNELEFLHT--HKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQI 211 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 DD++D + GK D K + +L ++ K ++N D Sbjct: 212 NDDIIDVTTSQEQSGKPTNNDTH--KNSFVNLLGLEQAIKTKENLLSECEQD 261 >gi|302336784|ref|YP_003801990.1| polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293] gi|301633969|gb|ADK79396.1| Polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293] Length = 356 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 74/307 (24%), Positives = 123/307 (40%), Gaps = 28/307 (9%) Query: 42 GKRLR-PMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GK +R +++L L+ + L A+E +A L+HDD++D +RRG+ Sbjct: 48 GKMIRGSLVSLGAGLVAGEAPPAALPLGAAMELFQSALLIHDDIMDRDTMRRGQSTVHHY 107 Query: 101 W---------------GNQTSVLVGDFLLSQAFCMV-----IETKSQEALEALSLVACTL 140 + G + GD + AF +V I E + S + Sbjct: 108 YALEAAKYGTDDAAHLGESLGICAGDVAIFLAFSLVNEAGLIAGNHHELVGLFSREMSIV 167 Query: 141 AEGELRQLSLSKNL-DVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYG 198 ++ ++ S D + + + + KT FS L +LIAG R L+ YG Sbjct: 168 GTAQMSDVAWSDGWGDPNLAEVISLYRYKTGRYTFSLPLSAGALIAGADRRFRDLLEEYG 227 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 LGI FQ+ DD L GE E+GK IG D GK TL ++ + + + Sbjct: 228 ELLGILFQIRDDELGLFGESEEVGKPIGSDIAEGKKTLFYLMLKKAAEGEALSVLERIYG 287 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-----CLPDSSWKKSLMEV 313 GK ++ +++ I L E Y +KA+ L + W L ++ Sbjct: 288 KGKAGIDEVRQIRKIAVSTGVLSSVETMMDDYKRKAEAVLDQILSFGIGREPWSGYLRQL 347 Query: 314 VDFCLQR 320 +D+ +R Sbjct: 348 LDYVCRR 354 >gi|260653869|dbj|BAI44337.1| geranylgeranyl diphosphate synthase [Streptomyces melanosporofaciens] Length = 359 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 113/270 (41%), Gaps = 26/270 (9%) Query: 16 NFLILKRICSDVEMIPDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAI 71 +FL K + +P + L SGGKR+RP+L + + D + +A + Sbjct: 26 DFLTAKAHTTPQHHLPYLSGLLKDFLSGGKRIRPLLCVTGWQAVGGGEDTEPVFRVAACL 85 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLV----------------WGNQTSVLVGDFLLS 115 E H L+HDDV+DDS RRG+ +G +VL+GD L+ Sbjct: 86 EMFHAFALIHDDVMDDSDTRRGRPTIHRTLAALCATDRRPEQIERFGVSGAVLLGDLALT 145 Query: 116 QA-----FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170 + + + L LS + + G+ L + L E L V + KTA Sbjct: 146 WSDELLHSAGLTPVQFDAVLPLLSEMRTEVMLGQYLDLQATGELTDDVEATLTVNRYKTA 205 Query: 171 -VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 L V + IAG +A +Y + LG AFQL DD+L G+ GK+ +D Sbjct: 206 KYTIERPLHVGAAIAGAGPEAMEAFTAYALPLGEAFQLRDDLLGVYGDPESTGKSQLDDL 265 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTIND 259 R GK T + LA + + +S I + Sbjct: 266 RAGKNTTLIALALRGSDSTQAARLRSLIGN 295 >gi|163852146|ref|YP_001640189.1| polyprenyl synthetase [Methylobacterium extorquens PA1] gi|163663751|gb|ABY31118.1| Polyprenyl synthetase [Methylobacterium extorquens PA1] Length = 288 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 26/245 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN----HVLLACAIEFIHTATLLHDD 83 ++ + ++Y +F GG R+RP L LA AL GD+ A AIE +H A+L+HDD Sbjct: 25 PLLAEAIRYAVFPGGHRIRPRLCLAVALAC---GDDDPAASEAAAAAIELLHCASLVHDD 81 Query: 84 VV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 + DD+ RR K + +G +VL GD L+ AF ET ++ + + + +A + Sbjct: 82 LPCFDDAPTRRQKPSVHAAFGVPLAVLTGDALIVAAF----ETLARGVIRSPARLAGLV- 136 Query: 142 EGELRQLSLSKNLDVT-----EEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQA 193 G + + + S + V E Y+ ++ ++KT LF+AA + AG + Sbjct: 137 -GLIARAAGSPSGIVAGQAWESEPYVDLVEYQQAKTGALFAAATVAGAGAAGAPPLPWRL 195 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L G LG A+Q+ DD+ D E+GK G D G+P +L +R K+ Sbjct: 196 L---GECLGAAYQVADDLRDVACRQEEIGKPAGRDATLGRPNAAALLGMGGALERLKHLT 252 Query: 254 KSTIN 258 + I+ Sbjct: 253 QEAID 257 >gi|149202564|ref|ZP_01879536.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035] gi|149143846|gb|EDM31880.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035] Length = 287 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 107/227 (47%), Gaps = 22/227 (9%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKR+R L + +A + + + A AIE +H +L+HDD+ +D+ LRRG+ Sbjct: 38 GGKRIRGFLVMESARLHDVPETAAIWPATAIEALHAYSLVHDDLPAMDNDDLRRGQPTVH 97 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 + W T++LVGD L S AF +V + E L+L A G+ + L + LD+ Sbjct: 98 IKWDEATAILVGDALQSLAFELVAHPDCGPAEVRAGLTLSLARAAGGQ--GMVLGQALDI 155 Query: 157 TEEDY-----------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 E L K+ +L+SA + A + ++ L +Y LG+AF Sbjct: 156 AAETATSPLSLDEITTLQAGKTGALILWSA-----TAGACMAHADMTPLSTYARALGLAF 210 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 Q+ DDV+D G+ GK +G+D GK T +L R + Sbjct: 211 QIQDDVIDVTGDAAAAGKAVGKDAAAGKATFVSLLGLDGARARAASL 257 >gi|62089112|dbj|BAD93000.1| trans-prenyltransferase variant [Homo sapiens] Length = 297 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 7/185 (3%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNH 64 L +D++ + I K + + ++ +Y GK RP++ +A A + + H Sbjct: 105 LGWRDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRH 164 Query: 65 V-----LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 V +A E IHTA+L+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 165 VQASQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASI 224 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + L+ V L GE QL +N + YL KTA L + + + Sbjct: 225 ALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKA 284 Query: 180 SSLIA 184 L + Sbjct: 285 VCLCS 289 >gi|152986216|ref|YP_001346444.1| geranyltranstransferase [Pseudomonas aeruginosa PA7] gi|150961374|gb|ABR83399.1| geranyltranstransferase [Pseudomonas aeruginosa PA7] Length = 295 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 16/225 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSAL 90 ++Y + +GGKR+RP+L A L+ ACA+E IH +L+H +DD L Sbjct: 34 AMRYSVMNGGKRVRPLLAYAACEALQGEAQRADAAACAVELIHAYSLVHDDLPAMDDDDL 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEA---LEALSLVA-----CTL 140 RRG+ + T++L D L + AF ++ + + QE LE L+ +A + Sbjct: 94 RRGQPTTHRAFDEATAILAADGLQALAFEVLADGRRNPQEPTVCLEMLTHLARAAGSAGM 153 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSYG 198 G+ L S+ LD + +H + KT L A++ + +L +G + + AL+ Y Sbjct: 154 VGGQAIDLGSVGVALDQAALEVMH--RHKTGALIEASVRLGALASGRAEAATLAALERYA 211 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+AFQ+ DD+LD + +GK G+D + KPT P +L + Sbjct: 212 QAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLE 256 >gi|68535811|ref|YP_250516.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium K411] gi|260578102|ref|ZP_05846023.1| polyprenyl diphosphate synthase [Corynebacterium jeikeium ATCC 43734] gi|68263410|emb|CAI36898.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium K411] gi|258603741|gb|EEW16997.1| polyprenyl diphosphate synthase [Corynebacterium jeikeium ATCC 43734] Length = 389 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 79/315 (25%), Positives = 125/315 (39%), Gaps = 47/315 (14%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC----------------------- 69 V+ I +GGKR+RP A G C Sbjct: 52 VLSDFIVNGGKRVRPTFAWAGIRAAIEGGGGSPDALCGKGGDATSSSSADFNQGAILNAL 111 Query: 70 -AIEFIHTATLLHDDVVDDSALRRGKVAARLV----------------WGNQTSVLVGDF 112 A EFI L+HDD++D S RRG A +G ++L+GD Sbjct: 112 SAFEFIQACALIHDDIIDRSDTRRGFSTAHRTFESKHRERGWLGSSEHYGVSQAILIGDL 171 Query: 113 LLSQA-----FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 + A + T Q A A + + G++ ++L N D VIK Sbjct: 172 AFAWADDLYNGSGLSATALQRARPAWRAMRTEVIAGQILDIALEANGSEDVADSFAVIKY 231 Query: 168 KTAVLFSA-ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KTA A L + + +AG + L++ G ++G AFQL DD L G+ GK G Sbjct: 232 KTASYTVARPLHIGAALAGANEQTQSMLRNVGQDIGEAFQLRDDQLGVFGDPEVTGKPSG 291 Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEY 285 +D R GK T + A + G + + ++ + G+ S E ++++ I+ + A E Sbjct: 292 DDLRTGKRTTLINEALRSGGEPQVAALRAGLGKGEDSTEADIERLRDIIYDTGAQAKVEK 351 Query: 286 RAYSYGQKAKDSLRC 300 + Q+A +SL+ Sbjct: 352 LIEARTQRAIESLQA 366 >gi|153799412|gb|ABS50482.1| NapT7 [Streptomyces sp. CNQ525] Length = 357 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 108/253 (42%), Gaps = 57/253 (22%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 D + L+ SGGKR+RP + L + R V A +E +H + L+HDD++D+SA Sbjct: 57 DALTDLVTSGGKRVRPTFCITGYLAAGGDPRDPGIVAAAAGLEMLHVSALIHDDILDNSA 116 Query: 90 LRRGKVAARLVWGN----------------QTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 RRGK ++G+ +L+G+ L + +V + E Sbjct: 117 QRRGKPTIHTLYGDLHDSHGWRGESRRFGEGIGILIGNLALVYSQELVCQAPPAVLAEWH 176 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA--------- 184 L C+ ++++ + LDV A FSA ++S L+A Sbjct: 177 RL--CS-------EVNIGQCLDVC-----------AAAEFSADPQLSRLVALIKSGRYTI 216 Query: 185 ------GVQNSVRQALKS----YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 G + R L + YG +G AFQL DD+LD G+ E GK G DF K Sbjct: 217 HRPLVMGANAASRPDLAAAYVEYGEAVGEAFQLRDDLLDAFGDSTETGKPTGLDFTQHKM 276 Query: 235 TLPVILAFQRGTK 247 TL + A QR T Sbjct: 277 TLLLGWAMQRDTH 289 >gi|172040899|ref|YP_001800613.1| putative polyprenyl diphosphate synthase [Corynebacterium urealyticum DSM 7109] gi|171852203|emb|CAQ05179.1| putative polyprenyl diphosphate synthase [Corynebacterium urealyticum DSM 7109] Length = 394 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 104/244 (42%), Gaps = 34/244 (13%) Query: 33 VVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDN----------HVLLA-CAIEFIHTATLL 80 V++ + GGKR+RP A LE G + VLLA A+EF+ L+ Sbjct: 66 VLRGFVMGGGKRVRPTFAWAGFRAGLEGGGADGSSIQDVDPASVLLALSALEFVQACALI 125 Query: 81 HDDVVDDSALRRGKVAARLV----------------WGNQTSVLVGDFLLSQAFCMVIET 124 HDD++D+S RRG V +G ++L GD LS A ++ Sbjct: 126 HDDIIDESDTRRGNPTTHRVFESQHRERGWFGSSEHYGISQAILAGDLALSWADDLLATA 185 Query: 125 KSQEAL-----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA-ALE 178 ++ + + G+ ++L N + D + VI KTA A L Sbjct: 186 GLSPSIVDRVRGPWRAMRTEVLAGQQLDIALENNGSESIADAMQVINFKTASYTVARPLH 245 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + +AG + L YG +G AFQL DD L G+ GK G+D R GK T+ V Sbjct: 246 IGAALAGADERTIELLLEYGTLVGQAFQLRDDQLGVFGDPAVTGKPSGDDLRTGKRTVLV 305 Query: 239 ILAF 242 AF Sbjct: 306 NTAF 309 >gi|297197031|ref|ZP_06914428.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083] gi|197715682|gb|EDY59716.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083] Length = 351 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 91/193 (47%), Gaps = 20/193 (10%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL-----VWGNQTSV--------L 108 D V A ++E +H A ++HDD++DDS LR G+ A + V G +V L Sbjct: 72 DALVRAAASMELVHAAAVVHDDLIDDSPLRHGRPTAHVALRGAVHGRPRAVSAARSLAML 131 Query: 109 VGDFLLSQAFCMVIETKSQEALEA-----LSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163 VGD L+S A M + A A S++A L GE ++ + + T L Sbjct: 132 VGDLLMSLAGQMFATSGLPAAYLARARPLWSVLARELIAGECLEILRTGTVPDTATS-LK 190 Query: 164 VIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 VI+ KTA L + +AG +R+ +YG+ LG AFQL DD+L G+ G Sbjct: 191 VIRYKTAKYTVEQPLLIGGTLAGAGERLREGYSAYGLPLGEAFQLRDDLLGLFGDPEHTG 250 Query: 223 KNIGEDFRNGKPT 235 K +D +PT Sbjct: 251 KANADDVSGHRPT 263 >gi|297736851|emb|CBI26052.3| unnamed protein product [Vitis vinifera] Length = 254 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/217 (22%), Positives = 103/217 (47%), Gaps = 27/217 (12%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I ++Y + GGKR+ P++ ++ ++ + + + CA+E +H +L+ DD+ +D+ Sbjct: 24 IHKAMRYSLLDGGKRIHPIVCISACELVGGQESTAMPVVCAVEMLHVVSLMQDDLPCMDN 83 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 +RRGK + +G E++ ++ + LVA G+ Sbjct: 84 DDIRRGKPSNHKAFG--------------------ESELARSIGSQGLVA-----GQFLD 118 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 LS + ++ E + +K L A+ + +++ G + + L+ +G +G+ +Q+ Sbjct: 119 LSSEGSPEIGLEGLESIHINKAGPLLEASAVIGAMLGGGSSEQMEILRKFGRCVGLLYQV 178 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 VDD+LD E+GK G+D K T P ++ ++ Sbjct: 179 VDDILDITKSTQELGKTAGKDLVADKVTYPKLVGIEK 215 >gi|282865630|ref|ZP_06274681.1| Polyprenyl synthetase [Streptomyces sp. ACTE] gi|282559674|gb|EFB65225.1| Polyprenyl synthetase [Streptomyces sp. ACTE] Length = 358 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 106/234 (45%), Gaps = 14/234 (5%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D PD S GK +R L + A + G + V A A+E +H +L+HDD++ Sbjct: 56 DTAGTPDPAA----SEGKGVRQALAVLGAELCGAPGVSAVPGAVAVELVHAFSLVHDDIM 111 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ---EALEALSLVACTLAE 142 D LRR + A +G +VL GD LL+ A + + A+ LS +L Sbjct: 112 DGDELRRQRPAVWKSYGTGPAVLAGDGLLAAAVQTLAQAPGALGGPAVLRLSGALTSLVR 171 Query: 143 GELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G+ L + V + Y + + KT L A + +L+ G ++ AL Sbjct: 172 GQADDLLFADRPWTGPEAVRPDAYRSMAEHKTGALLGCAAALGALLGGAPDTTVTALDRA 231 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRGTKRE 249 G +LG+AFQ VDD+L G+ GK + D R K T PV+ LA T RE Sbjct: 232 GRHLGVAFQAVDDLLGIWGDPARTGKPVHGDLRQRKKTYPVLAALASDGPTARE 285 >gi|67633340|gb|AAY78591.1| predicted geranyltranstransferase [uncultured bacterium MedeBAC82F10] Length = 299 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 12/203 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RP L ++ + A A+E +H +L+HDD+ +D+ RRG Sbjct: 43 YFVKTGGKRIRPFLITTMGSLIGIKSQILNDFALAVECVHLHSLIHDDLPAMDNDDYRRG 102 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVACT-----LAEGEL 145 K+ + T+VL GD + ++++KS + +EA+ +++ L G+ Sbjct: 103 KLTVHKKFDEATAVLAGDMFQVLSVKTLVDSKSLSANQKVEAIQMLSKANGLEGLIAGQS 162 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + + K V + + ++++K T LFS + + + + LK G +G F Sbjct: 163 LDIYMKKKSSVKDIETMYLLK--TGALFSLCFNLLLTVKKLNAQKAKDLKIIGDTIGKIF 220 Query: 206 QLVDDVLDYRGEVNEMGKNIGED 228 Q+ DD+LD G+ ++GK I +D Sbjct: 221 QVTDDMLDRWGDEKKVGKKINKD 243 >gi|306830872|ref|ZP_07464034.1| geranyltranstransferase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426895|gb|EFM30005.1| geranyltranstransferase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 289 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 131/260 (50%), Gaps = 39/260 (15%) Query: 12 MEKVNFL--ILKRICSDVEMI-PDVVKYLIFS---GGKRLRPMLTLATALMLEYRG---- 61 M+K+N + ++R + +++ P++++ +++S GGKR+RP++ L +LE G Sbjct: 1 MDKLNEINQAIRRYYAQSDVVSPELIEAILYSVEAGGKRIRPLIFLE---ILEGFGIELT 57 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 + H +A A+E IHT +L+HDD+ RRG++ + T++L GD L F Sbjct: 58 EGHFDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFG 117 Query: 120 MVI------ETKSQEALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHV 164 +V +TK + E LS + T +GE R+L+LS E +H Sbjct: 118 LVANAALSADTKVRLIAE-LSQASGTYGMVGGQMLDMKGEERKLNLS------ELQMIHA 170 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 +KT L + + + ++A + ++L+ G +G+AFQ+ DD+LD E+GK Sbjct: 171 --NKTGKLLTFPVVAAGIVANLAADDLKSLREAGSLVGLAFQVRDDILDVTATFEEIGKT 228 Query: 225 IGEDFRNGKPTLPVILAFQR 244 +D K T P +L ++ Sbjct: 229 PKKDLLADKATYPSLLGLEK 248 >gi|315427283|dbj|BAJ48895.1| octaprenyl-diphosphate synthase [Candidatus Caldiarchaeum subterraneum] Length = 312 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 112/212 (52%), Gaps = 20/212 (9%) Query: 22 RICSDVEMIPDVVKYLI---FSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTA 77 R+ +E PD +LI GGKRLRP+L L L L +A A+E H+A Sbjct: 24 RLREKIEGRPD--SFLIERAVRGGKRLRPILLLTVFKTLGGTDYTKALDVAVALELAHSA 81 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---ETKSQEALEALS 134 +L+HDD+VD +RRGKV+ G +++ G +++ AF +V+ E ++ +EA Sbjct: 82 SLVHDDIVDFDKVRRGKVSLWYQIGAGKAIIQGHRIINLAFNIVLDIGEEMTRIFVEAWD 141 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + + + + + +L++ L YL +I+ KTA LF AA + +++AG + Q + Sbjct: 142 RASKGILDEVVNKAALTERL------YLLMIREKTASLFEAAAQAGAVLAGASPEMVQHM 195 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 + YG +G +QL DD+ + N KN+G Sbjct: 196 RRYGSEVGTVYQLADDLTE-----NIKRKNLG 222 >gi|149918648|ref|ZP_01907136.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1] gi|149820489|gb|EDM79903.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1] Length = 388 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 105/209 (50%), Gaps = 15/209 (7%) Query: 43 KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102 K LRP L +A A L + A A+E +H A L+HDDV D+S RRG+ + +G Sbjct: 52 KGLRPALCVAAARALGASRSAALPSAAALELLHNAFLIHDDVEDESLARRGEPTLQRRYG 111 Query: 103 NQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVACTL---AEGELRQLSLSKN-- 153 T++ +GD +L+ A +++ ALE L LV T+ A G+ R+L + Sbjct: 112 QATAMNMGDAMLALALGPLLDNTGVIGLGPALEVLDLVRETVVVTAAGQARELEWIRQGR 171 Query: 154 LDVTEE---DYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 D + Y ++ +KTA F + V + IA V+ R L +Y ++G+AFQ+ D Sbjct: 172 WDFGSDYAAAYEALVVAKTAHYSFITPVVVGATIAEVRGDARAQLAAYARHVGVAFQITD 231 Query: 210 DVLDYR--GEVNEMGKNIGEDFRNGKPTL 236 D+L+ R GE GK D GK TL Sbjct: 232 DLLNLRAAGEPGAYGKESAGDLWEGKRTL 260 >gi|325977772|ref|YP_004287488.1| putative geranyltranstransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177700|emb|CBZ47744.1| putative geranyltranstransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 289 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 125/257 (48%), Gaps = 36/257 (14%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFS---GGKRLRPMLTLATALMLEYRG----DNH 64 + ++N I + + P++++ +++S GGKR+RP++ L +LE G + H Sbjct: 4 LNEINQAIRRYYAQSDAVSPELIEAILYSVEAGGKRIRPLIFLE---ILEGFGIELTEGH 60 Query: 65 VLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +A A+E IHT +L+HDD+ RRG++ + T++L GD L F +V Sbjct: 61 FDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFGLVA 120 Query: 123 ------ETKSQEALEALSLVACTLA---------EGELRQLSLSKNLDVTEEDYLHVIKS 167 +TK + E LS + T +GE R+L+LS E +H + Sbjct: 121 NAALSADTKVRLIAE-LSQASGTYGMVGGQMLDMKGEERKLNLS------ELQLIHA--N 171 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KT L + + + ++A + ++L+ G +G+AFQ+ DD+LD E+GK + Sbjct: 172 KTGKLLTFPVVAAGIVANLAADDLKSLREAGSLVGLAFQVRDDILDVTATFEEIGKTPKK 231 Query: 228 DFRNGKPTLPVILAFQR 244 D K T P +L ++ Sbjct: 232 DLLADKATYPSLLGLEK 248 >gi|260103264|ref|ZP_05753501.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM 20075] gi|260082925|gb|EEW67045.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM 20075] Length = 164 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GEL Q++ NL+ T DYL+ IK KTA LF A E + AG AL ++G NLG Sbjct: 15 GELGQMAERFNLEQTFTDYLNDIKGKTAALFRLAAEEGAHFAGGNAEQSTALANFGENLG 74 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 IAFQ+VDD+LDY G ++ K ED G +LP++ A + + K Sbjct: 75 IAFQIVDDLLDYTGSA-KLNKPTLEDLATGVYSLPLLFALDQPKLKTK 121 >gi|255671648|gb|ACU26409.1| geranylgeranyl pyrophosphate synthase CrtE [uncultured bacterium HF186_25m_30B18] gi|255671718|gb|ACU26476.1| geranylgeranyl pyrophosphate synthase [uncultured bacterium HF186_25m_13D19] Length = 356 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 8/206 (3%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 VV++L +GGK++R + L A L V +A A E +H ATL+HDD+ D +RR Sbjct: 60 VVQHL-QTGGKQVRARIVLEAARALGEEPMTLVPIAAACELLHNATLVHDDLQDGDTVRR 118 Query: 93 GKVAARLVWGNQTSVLVGDFL-----LSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 G+ A + G ++ VGD + L+ +++ + A + A A G+ + Sbjct: 119 GEPAVWVRHGEAQAINVGDAMLMLPTLALEQMLLMPSVRWYIATAFTRRATETACGQALE 178 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 L L + YL K+ FS +E ++L AG Q + +A+ + LG FQ+ Sbjct: 179 LELLGRGWLGRGPYLRAALGKSGPFFSLPIETAALAAGRQPTRARAIGDALLALGALFQI 238 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGK 233 DDVLD G+ + G D R GK Sbjct: 239 RDDVLDLFGDKGRGQR--GNDLREGK 262 >gi|283953738|ref|ZP_06371269.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 414] gi|283794779|gb|EFC33517.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 414] Length = 279 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 17/232 (7%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 +GGK R L L+ + N L A A+EFIHT +L+HDD+ +D++ RRG Sbjct: 33 AGGKHFRAQLLLSVVQSNKPELINQALDAALALEFIHTYSLIHDDLPSMDNADFRRGIPT 92 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 + T++LVGD L ++AF ++ ++ ++ + L+ L + + + +D Sbjct: 93 LHKSYDETTAILVGDALNTEAFLVLSHANLKDEIK-IKLIKTLAFNAGLNGMVIGQAIDC 151 Query: 157 TEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 ED +LH KTA L +AAL++ I + N + G+ LG+ FQ+ Sbjct: 152 FFEDKRLSLNELEFLHT--HKTARLIAAALKMGCEICQLSNEESNQIYKLGLKLGLIFQI 209 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 DD++D + GK D K + +L ++ K ++N D Sbjct: 210 NDDIIDTTMSEEQSGKPTNNDTH--KNSFVNLLGLEQAIKTKENLLSECEQD 259 >gi|149184238|ref|ZP_01862556.1| Polyprenyl synthetase [Erythrobacter sp. SD-21] gi|148831558|gb|EDL49991.1| Polyprenyl synthetase [Erythrobacter sp. SD-21] Length = 350 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 15/211 (7%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 GGK LRP + +A AL+ A A+E +H A L+HDDV D+S LRRG Sbjct: 55 GGKMLRPGICIANALIFGGELTQAARCAAAVELLHNALLIHDDVQDESDLRRGLPTLHAQ 114 Query: 101 WGNQTSVLVGDFLLSQAFCMVIET-------KSQEALEALSLVACTLAEGELRQLSL-SK 152 G ++ GD LL AF +++ +Q +E +A AEG+ +L + Sbjct: 115 HGVALAINAGDALLFTAFQPLLDAIRPLGADLAQRVIEVTIAMARQTAEGQALELGWRDR 174 Query: 153 NL-DVTEEDYLHVIKSKTA---VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 N+ ++TE DYL + KTA +++ A L V L+ G + +G LG+AFQ+ Sbjct: 175 NVTELTEADYLRMALKKTAWMGMIWPAQLGV--LMGGRGRIDPARVVRFGHFLGLAFQIE 232 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 DD+ + GK D GK TL +I Sbjct: 233 DDLRNLTDNPG-YGKERNGDLYEGKRTLMLI 262 >gi|294816499|ref|ZP_06775142.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294329098|gb|EFG10741.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 397 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 79/275 (28%), Positives = 116/275 (42%), Gaps = 50/275 (18%) Query: 16 NFLILK-RICSDVEMIPDVVKYL---IFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLAC 69 FL+ K R ++ M +VV+ L +F+GGKRLRP+L + A V A Sbjct: 62 GFLVGKQRAAAEHCMPAEVVQTLRNFVFAGGKRLRPLLCICGWYAGGGAGDMAAVVQAAA 121 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVA----------------ARLVWGNQTSVLVGDFL 113 ++E H L+HDD++D S RRGK A G ++LVGD Sbjct: 122 SLEMFHAFALIHDDLMDHSDTRRGKPTVHRSLAAHHSALRGQEAASHLGTGGAILVGDLA 181 Query: 114 LS----------------QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 L+ A VI+ E + L C + L +LD Sbjct: 182 LAWSDELLHTAGLTPDRLAAVLPVIDGMRTEVMYGQYLDLCAAGDPTL-------DLDAA 234 Query: 158 EEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 L V + KTA L + + +AG +V +A +Y + LG AFQL DD+L G Sbjct: 235 ----LTVARYKTAKYTCERPLHIGASLAGAGLAVLEACTAYALPLGEAFQLRDDLLGVYG 290 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + GK + +D R K T+ + LA QR ++ Sbjct: 291 APEQTGKPVLDDLRGAKHTVLLALALQRADAAQRK 325 >gi|295698395|ref|YP_003603050.1| geranyltranstransferase [Candidatus Riesia pediculicola USDA] gi|291157112|gb|ADD79557.1| geranyltranstransferase [Candidatus Riesia pediculicola USDA] Length = 302 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/242 (22%), Positives = 119/242 (49%), Gaps = 20/242 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 +V++Y+IF G K++R + ML+ +A ++E +H +L+HDD+ +D+ Sbjct: 40 NVIRYIIFEG-KKIRSCFIYSVGSMLKVSCKQISKIAASVECMHAYSLIHDDLPSMDNDD 98 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVACTLAEGELRQ 147 +RR K + +V+G ++L G+ L + AF + + K+ + L ++ G ++ Sbjct: 99 IRRNKKSCHIVFGEANAILAGNALQALAFELLLSLNRKNLDHKSHLQIIRELTIAGGIKG 158 Query: 148 LSLSKNLDVTEEDYLH--------VIKSKTAVLFSAALEVSSLIAGV--QNSVRQALKSY 197 + ++LD++++ H + KT L A++ + + + + L Y Sbjct: 159 ICGGQSLDISKKKRCHMNIELLNIIYFYKTVSLIRASIRMIFYASRYRYEKKLILILDDY 218 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 N+G+ FQ+ DD++D++ + K ++ K T P+++ + K KN +K +I Sbjct: 219 SENIGLLFQIADDLIDFKKD-----KLKSQNQNKNKITYPILIGIDQSKKSIKNLYKKSI 273 Query: 258 ND 259 + Sbjct: 274 RN 275 >gi|190894247|ref|YP_001984541.1| farnesyltranstransferase protein [Rhizobium etli CIAT 652] gi|190699908|gb|ACE93991.1| farnesyltranstransferase protein [Rhizobium etli CIAT 652] Length = 328 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 21/230 (9%) Query: 22 RICSDVEMIPDVVKYL-------IFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEF 73 R D + P +L +F GG R+RP L L + + E + A AIE Sbjct: 41 RAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPELATRAAAAIEL 100 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEAL 130 +H A+L+HDD+ D++ALRRG+ ++G +VL GD L+ AF + ++ L Sbjct: 101 LHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYLSLQAALTPEL 160 Query: 131 EALSLVACTLAEGELRQLSLSKNLD----VTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A + A G L ++++ V + Y H KT LF AA +L +G Sbjct: 161 GARMIEVVAEAVGPSHGLIAGQSMEAMTHVPIDRYHHY---KTGSLFVAAATCGALASGA 217 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG A+Q+ DD+ D G +GK D + +P++ Sbjct: 218 DPA---PWSKVGELLGHAYQIADDIADTVGRAEVLGKLPAVDTQLNRPSI 264 >gi|119945899|ref|YP_943579.1| geranyltranstransferase [Psychromonas ingrahamii 37] gi|119864503|gb|ABM03980.1| farnesyl-diphosphate synthase [Psychromonas ingrahamii 37] Length = 296 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 65/250 (26%), Positives = 120/250 (48%), Gaps = 15/250 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 ++ + + Y GGKR+RP L A ML + LA A+E IH +L+HDD+ Sbjct: 32 LLNEAMGYGALLGGKRVRPFLVYAVGDMLGCSLQSLDPLAAAVECIHAYSLIHDDLPAMD 91 Query: 89 A--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLVACTLAEGEL 145 LRRG++ + T++L GD L + AF ++ + K+ A L +V Sbjct: 92 DDDLRRGQMTCHKKFDEATAILAGDALQTLAFDIISMPNKAITAQAQLKMVNFLAKAAGD 151 Query: 146 RQLSLSKNLDVTEED-------YLHVIKSKTAVLFSAALEVSSLI-AGVQNSVRQALKSY 197 + + LD+ E+ + ++KT L A++++++ + + Q L ++ Sbjct: 152 HGMCAGQALDLVAENQSVNLVTLQKIHQAKTGALIKVAIQLAAMTKSDLHEDHFQLLNTF 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD G+ +GK G D K T P +L G + +N ++ Sbjct: 212 ADAIGLAFQVQDDILDIIGDTQTLGKPQGSDLALHKSTYPALL----GLEEAQNKAQALC 267 Query: 258 NDGKISVENL 267 ++ ++++ L Sbjct: 268 HEAQLALSQL 277 >gi|71664964|ref|XP_819457.1| polyprenyl synthase [Trypanosoma cruzi strain CL Brener] gi|70884759|gb|EAN97606.1| polyprenyl synthase, putative [Trypanosoma cruzi] Length = 747 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 28/251 (11%) Query: 19 ILKRICSDVEMIPD--------VVKYLIFSGGKRLRPMLTLA--TALMLEYRGDNHVLLA 68 +L R C+ ++P V++LI GGK R A AL +Y + ++ Sbjct: 421 VLGRFCTCKGVLPQHICDTLFLPVRFLIDRGGKCWRTFFLFACSNALSRDYADTSRCVII 480 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKS 126 E H +L+ DD+ D S++RRG AA + +G T++ G F +S F V + Sbjct: 481 --TELGHVGSLIIDDIEDGSSVRRGGKAAHVEFGTPTAINAGTACFFMSVPFADVSSLPA 538 Query: 127 QEALEALSLV-----ACTLAEG-ELRQLS--LSKNLDVTE----EDYLHVIKS-KTAVLF 173 ++A L A +G ++R L + + E ED L I + KT + Sbjct: 539 EKAKRFYELYFEMMKAAHAGQGLDIRGLGYLMPDVVRTGETKALEDALKAIHTCKTGAIC 598 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 A + ++ V A++ +G +G+A+Q++DDVL +G + K GED R+GK Sbjct: 599 GAICSFACVLTDTSEEVTLAMEEFGKAIGLAYQIIDDVLGVKGFEGNL-KEAGEDIRDGK 657 Query: 234 PTLPVILAFQR 244 T PV A + Sbjct: 658 ITYPVAKAMGK 668 >gi|254392179|ref|ZP_05007366.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|326444821|ref|ZP_08219555.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|197705853|gb|EDY51665.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 362 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 79/275 (28%), Positives = 116/275 (42%), Gaps = 50/275 (18%) Query: 16 NFLILK-RICSDVEMIPDVVKYL---IFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLAC 69 FL+ K R ++ M +VV+ L +F+GGKRLRP+L + A V A Sbjct: 27 GFLVGKQRAAAEHCMPAEVVQTLRNFVFAGGKRLRPLLCICGWYAGGGAGDMAAVVQAAA 86 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVA----------------ARLVWGNQTSVLVGDFL 113 ++E H L+HDD++D S RRGK A G ++LVGD Sbjct: 87 SLEMFHAFALIHDDLMDHSDTRRGKPTVHRSLAAHHSALRGQEAASHLGTGGAILVGDLA 146 Query: 114 LS----------------QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 L+ A VI+ E + L C + L +LD Sbjct: 147 LAWSDELLHTAGLTPDRLAAVLPVIDGMRTEVMYGQYLDLCAAGDPTL-------DLDAA 199 Query: 158 EEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 L V + KTA L + + +AG +V +A +Y + LG AFQL DD+L G Sbjct: 200 ----LTVARYKTAKYTCERPLHIGASLAGAGLAVLEACTAYALPLGEAFQLRDDLLGVYG 255 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + GK + +D R K T+ + LA QR ++ Sbjct: 256 APEQTGKPVLDDLRGAKHTVLLALALQRADAAQRK 290 >gi|156360985|ref|XP_001625302.1| predicted protein [Nematostella vectensis] gi|156212129|gb|EDO33202.1| predicted protein [Nematostella vectensis] Length = 303 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 21/221 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ + KY++ GK++R L A + L+ D ++A ++ +H ++LL DD+ D+ Sbjct: 14 EILLEPYKYILQVPGKQVRETLIQAFNVWLKIPEDKLKIIADVVKMLHNSSLLIDDIEDN 73 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G ++ +++ +A V+ E + + EL + Sbjct: 74 SKLRRGIPVAHTIYGVAQTINSANYIYFKALEKVLSLNHPECIHVFT--------EELLE 125 Query: 148 LSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L + +D+ TEE+Y +++ KT LF A+ + L + ++ L Sbjct: 126 LHRGQGMDIYWRDSYTCPTEEEYRDMVRKKTGGLFRVAVRLMQLFSENKSDFLPLLDM-- 183 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 LG+ FQ+ DD + E + K+ ED GK + P+I Sbjct: 184 --LGLYFQIRDDYANLLSEEYKENKSFCEDLTEGKFSFPII 222 >gi|26376318|dbj|BAB28153.2| unnamed protein product [Mus musculus] gi|220941794|emb|CAX15883.1| prenyl (solanesyl) diphosphate synthase subunit 1 [Mus musculus] Length = 280 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 7/175 (4%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN--- 63 L +D++ + I K + + D+ +Y GK RP++ + A +N Sbjct: 92 LGWRDLKGLYEDIRKELHISTRELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNARE 151 Query: 64 ----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +A E IHTATL+HDDV+DD++ RRGK +WG + +VL GD +LS A Sbjct: 152 MQASQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASV 211 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 + + + L+ V L GE QL +N + YL KTA L + Sbjct: 212 ALARIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIA 266 >gi|255023840|ref|ZP_05295826.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-208] Length = 145 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 5/121 (4%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGDNHVLLA 68 KD+++V I K I + + VK LI +GGK LRP L +A +Y D V +A Sbjct: 15 KDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAFALLSAQAGPDYDKDRAVSIA 74 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 A+E +H ATL+HDDVVDDS LRRG +G +V GD+L FC+ + S Sbjct: 75 AALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYL----FCICFKILSAH 130 Query: 129 A 129 A Sbjct: 131 A 131 >gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa] Length = 314 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 32/223 (14%) Query: 30 IPDVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV-- 84 I + ++Y + + G KR P++ +A + + G+ H ACA+E +H+A+L+HDD+ Sbjct: 48 IYEAMRYSVLAKGAKRAPPVMCVAACEL--FGGNRHAAFPTACALEMVHSASLIHDDLPC 105 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALEA--LSLVA---- 137 +DD RRG+ + ++G ++L GD L F ++ T S E LS++A Sbjct: 106 MDDDPSRRGQPSNHKIYGVDMAILAGDALFPLGFRHIVSHTPSDLVPEPRLLSVIAEIAR 165 Query: 138 ----CTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 +A G+ L N ++ +E + +AV L+AG ++ Q Sbjct: 166 AVGSTGMAAGQFLDLEGGPNSVEFVQEKKFGEMGECSAV-------CGGLLAGAKDDEIQ 218 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED--FRNGK 233 L+ YG +G+ +Q+VDD+L E M + ED R GK Sbjct: 219 RLRRYGRAVGVLYQVVDDIL----EAKTMKSKVDEDKKKRKGK 257 >gi|284030790|ref|YP_003380721.1| polyprenyl synthetase [Kribbella flavida DSM 17836] gi|283810083|gb|ADB31922.1| Polyprenyl synthetase [Kribbella flavida DSM 17836] Length = 357 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 37/273 (13%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDDSALRRGKVAAR 98 SGGKRLRP + +L A A +E +H + L+HDDV+D S +RRG AA Sbjct: 46 SGGKRLRPSFCYWGFRAAGGDPERPILTAAASLEMLHVSALVHDDVMDSSDVRRGAPAAH 105 Query: 99 --------------------LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-----L 133 + +G ++L+GD L A M+ + A A Sbjct: 106 KRFEALQRARTEASGTGGDPVGFGIGAAILLGDLCLIWADEMMHTSGFDAAALARASKFF 165 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQ 192 V + G+ L + + + L V++ K+A L + + + G + Sbjct: 166 DAVRVEVTAGQYLDLVAQASGEADMDRALRVLRYKSATYTVERPLHIGAALGGGDQYLID 225 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG-----TK 247 AL +YG+ LG AFQL DD+L G+ GK G+D R GK T+ V A + T+ Sbjct: 226 ALSAYGLPLGEAFQLRDDLLGVFGDPGVTGKPAGDDLREGKRTVLVAYAAEHMSPVQLTE 285 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRAL 280 ++ F ++ ++D +I + L++ I++++RA+ Sbjct: 286 FDRLFGRAELDDDEIQL--LRE---ILQDSRAV 313 >gi|327193306|gb|EGE60211.1| farnesyltranstransferase protein [Rhizobium etli CNPAF512] Length = 309 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 21/230 (9%) Query: 22 RICSDVEMIPDVVKYL-------IFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEF 73 R D + P +L +F GG R+RP L L + + E + A AIE Sbjct: 22 RAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPELATRAAAAIEL 81 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEAL 130 +H A+L+HDD+ D++ALRRG+ ++G +VL GD L+ AF + ++ L Sbjct: 82 LHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYLSLQAALTPEL 141 Query: 131 EALSLVACTLAEGELRQLSLSKNLD----VTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A + A G L ++++ V + Y H KT LF AA +L +G Sbjct: 142 GARMIEVVAEAVGPSHGLIAGQSMEAMTHVPIDRYHHY---KTGSLFVAAATCGALASGA 198 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG A+Q+ DD+ D G +GK D + +P++ Sbjct: 199 DPA---PWSKVGELLGHAYQIADDIADTVGRAEVLGKLPAVDTQLNRPSI 245 >gi|256789881|ref|ZP_05528312.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|289773764|ref|ZP_06533142.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|289703963|gb|EFD71392.1| polyprenyl synthetase [Streptomyces lividans TK24] Length = 357 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 76/289 (26%), Positives = 123/289 (42%), Gaps = 26/289 (8%) Query: 31 PDVV---KYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVVD 86 PD V + L GGKR+R +L A ++ D A +IE + T L+HDD++D Sbjct: 41 PDCVGLLRDLSLRGGKRMRVVLLHEAARLVTAEPVDGLDAAALSIELLQTHGLVHDDLID 100 Query: 87 DSALRRG----------KVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALE 131 DSA RRG + R +VL GD L+ + ++++ + Q +E Sbjct: 101 DSATRRGGPTTYYAYRERFPGRPRAALGLTVLAGDLALALSLRVLLDAELPVAVRQAMVE 160 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS--AALEVSSLIAGVQNS 189 + A G++ L V + + LH + +S A + + L AG + Sbjct: 161 VQTRAATDTFVGQIADLERDFTAAVPDAEMLHDVADHKTARYSVLAPMRLGLLAAGAEPG 220 Query: 190 VRQ-ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + L+ Y +GI Q+ DD LD G+ GK G D R G+ T V+ + Sbjct: 221 AHEDELRRYARLVGICGQMRDDWLDLFGDEGTTGKPTGGDIREGRHTYTVVRLLSAVSGS 280 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA--YSYGQKAK 295 E++F + D + E + + I RA V RA Y ++A+ Sbjct: 281 ERDFVDRALGDPACTPETIAEIRAI--GERAGVADRMRADMRQYAERAR 327 >gi|324513413|gb|ADY45511.1| Geranylgeranyl pyrophosphate synthase [Ascaris suum] Length = 307 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 7/218 (3%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 M P V Y+ GK +R L A L L+ + L+ C +E +H A+LL DD+ D S Sbjct: 9 MAPFV--YISKVPGKHVRSRLATAFNLWLKINDNPLELIMCTVEMLHNASLLIDDIEDSS 66 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG A V+G ++ G+++ A ++ +A+E L G+ ++L Sbjct: 67 ILRRGIPVAHSVYGVARTINTGNYVYFVALSKCLQLAKPKAIEIFCEKMLELHRGQGKEL 126 Query: 149 SLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + TE Y ++ KT LFS + + L + Q + + NL + Q+ Sbjct: 127 YWRDTMQCPTESQYEEMVIEKTGGLFSLTVRLMELFSVHQYNFTPLIN----NLALYCQI 182 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 DD ++ K+ ED +GK + P++ A + G Sbjct: 183 RDDYINLCSRDYAELKSFAEDLTDGKFSFPIVAAVRHG 220 >gi|256392496|ref|YP_003114060.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928] gi|256358722|gb|ACU72219.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928] Length = 347 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 22/241 (9%) Query: 60 RGDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS----------- 106 +GD ++ A A+E +H A L+HDD++DDS LRRG + T+ Sbjct: 64 QGDTPAMVRAAAAMELVHAAALVHDDLIDDSLLRRGVPTPHVALREATAKAPDPDGAARS 123 Query: 107 --VLVGDFLLSQAFCMVIETKSQ-----EALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 +LVGD L++ A + + A S++A L GE ++ L + + Sbjct: 124 LALLVGDLLMAWAGQLFTGSGLPAVYLARARPMWSVLARELIAGECLEV-LRTGTETDPQ 182 Query: 160 DYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + L +I+ KTA L++ + G YG+ LG AFQL DD+L G+ Sbjct: 183 ESLTIIRYKTAKYTVEHPLQIGGRLGGASARTLGVFSDYGLPLGEAFQLRDDLLAVFGDP 242 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278 GKN +D +PT V A Q T R++ + I +L + I++ + Sbjct: 243 AITGKNNLDDLVAARPTALVAFARQGATPRDRAVLDRLLGREDIGSADLAEVRAILQRSG 302 Query: 279 A 279 A Sbjct: 303 A 303 >gi|21492720|ref|NP_659794.1| farnesyltranstransferase protein [Rhizobium etli CFN 42] gi|218515967|ref|ZP_03512807.1| farnesyltranstransferase protein [Rhizobium etli 8C-3] gi|21467145|gb|AAM54808.1| farnesyltranstransferase protein [Rhizobium etli CFN 42] Length = 309 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 21/230 (9%) Query: 22 RICSDVEMIPDVVKYL-------IFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEF 73 R D + P +L +F GG R+RP L L + + E + A AIE Sbjct: 22 RAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPELATRAAAAIEL 81 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEAL 130 +H A+L+HDD+ D++ALRRG+ ++G +VL GD L+ AF + ++ L Sbjct: 82 LHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYLSLQAALTPEL 141 Query: 131 EALSLVACTLAEGELRQLSLSKNLD----VTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A + A G L ++++ V + Y H KT LF AA +L +G Sbjct: 142 GARMIEVVAEAVGPSHGLIAGQSMEAMTHVPIDRYHHY---KTGSLFVAAATCGALASGA 198 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G LG A+Q+ DD+ D G +GK D + +P++ Sbjct: 199 DPA---PWSKVGELLGHAYQIADDIADTVGRAEVLGKLPAVDTQLNRPSI 245 >gi|330465077|ref|YP_004402820.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] gi|328808048|gb|AEB42220.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] Length = 372 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 117/262 (44%), Gaps = 58/262 (22%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGD-------NHVLLACA-IEFIHTATLLHDDVVDDSA 89 + +GGKR+RP +RG + VL A A +E +HT L+HDDV+D SA Sbjct: 61 VLAGGKRVRPTFG-----YWGWRGAASGDEPLHRVLPALATLELLHTFALVHDDVMDHSA 115 Query: 90 LRRGKVAARLV----------------WGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 RRG+ A + +G +VL+GD L A ++ ++ AL A Sbjct: 116 TRRGRPTAHVAMAAQHAAAGRCGDSGRFGEAVAVLIGDLCLVWADQLL----ARAALPAS 171 Query: 134 SLVACTLAEGELRQLSLSKN-LDVTEED---------YLHVIKSKTA-------VLFSAA 176 L+ +R +++ LD+ E L V + KTA +LF A+ Sbjct: 172 RLLDVRRGYDRMRVETIAGQYLDILGEADPENWSVDRALRVARYKTASYTVQRPLLFGAS 231 Query: 177 LEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 L AGV + A YG+ +G AFQL DD+L G+ GK G+D R GKP Sbjct: 232 L------AGVDGGTPLTDAYTRYGLAVGEAFQLRDDLLGVYGDPTATGKPAGDDLRTGKP 285 Query: 235 TLPVILAFQRGTKREKNFWKST 256 T ++LA + + ++ T Sbjct: 286 TALLMLARELASPAQRQALDGT 307 >gi|149909332|ref|ZP_01897988.1| geranyltranstransferase [Moritella sp. PE36] gi|149807649|gb|EDM67597.1| geranyltranstransferase [Moritella sp. PE36] Length = 296 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 18/240 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y + GGKR+RP++ A ML + A AIE IH +L+HDD+ L Sbjct: 35 AMEYGLLQGGKRIRPVIVYAVGEMLGVNLRDLDGPAAAIESIHAYSLIHDDLPAMDDDDL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEA-------LEALSLVA--CTL 140 RRG+ + + + T++L GD L AF M+++ + EA L++L+ + + Sbjct: 95 RRGQPTCHIKFDHATAILAGDALQPFAFEMLLDCALAPEAEKNRFAMLKSLTQASGYSGM 154 Query: 141 AEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR--QALKSY 197 G+ L+ + K + +T+ + +H +KT L + A ++ L A S+ AL + Sbjct: 155 CGGQAMDLAATDKQISLTQLEAIH--NNKTGALINCAAKLGCL-ASPHCSIELLAALDKW 211 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +G+AFQ+ DD+LD + +GK G D K T P +L ++ + ++ I Sbjct: 212 SNAIGLAFQVQDDILDIISDTETLGKPQGSDVELNKSTYPALLGLAGAQEKAQALYQQAI 271 >gi|56698924|gb|AAW23160.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis] Length = 379 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 27/255 (10%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT----LATALMLEYRGDNH 64 L+D ++ I E ++ + GGKR+RP L G + Sbjct: 36 LRDFFDSRRELVSNIGGGYEKAVSTLEAFVLRGGKRVRPSFAWTGWLGAGGDPNGSGADA 95 Query: 65 VLLACA-IEFIHTATLLHDDVVDDSALRRGKVAARLV---------W-------GNQTSV 107 V+ ACA +E + L+HDD++D S RRG + W G ++ Sbjct: 96 VIRACAALELVQACALVHDDIIDASTTRRGFPTVHVEFEDQHRGEEWSGDSAHFGEAVAI 155 Query: 108 LVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAE----GELRQLSLSKNLDVTEEDYL 162 L+GD L+ A M+ E+ S +A +S V + G+ +S D T E + Sbjct: 156 LLGDLALAWADDMIRESGISPDAAARVSPVWSAMRTEVLGGQFLDISNEARGDETVEAAM 215 Query: 163 HVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 V + KTA L + + + G + A +++G ++GIAFQL DD+L G+ + Sbjct: 216 RVNRYKTAAYTIERPLHLGAALFGADAELIDAYRTFGTDIGIAFQLRDDLLGVFGDPSVT 275 Query: 222 GKNIGEDFRNGKPTL 236 GK G+D GK T+ Sbjct: 276 GKPSGDDLIAGKRTV 290 >gi|300508789|pdb|3NPK|A Chain A, The Crystal Structure Of Geranyltranstransferase From Campylobacter Jejuni gi|300508790|pdb|3NPK|B Chain B, The Crystal Structure Of Geranyltranstransferase From Campylobacter Jejuni Length = 291 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 17/232 (7%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 +GGK R L L+ + N L +A A+EFIHT +L+HDD+ D++ RRG Sbjct: 37 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAXDNADFRRGIPT 96 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 + T++LVGD L ++AF ++ ++ ++ + L+ L + + +D Sbjct: 97 LHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIK-IKLIKTLAFNAGLNGXVIGQAIDC 155 Query: 157 TEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 ED +LH KTA L +AAL+ I + N + G+ LG+ FQ+ Sbjct: 156 FFEDKRLSLNELEFLHT--HKTARLIAAALKXGCEICELNNEESNQIYKLGLKLGLIFQI 213 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 DD++D + GK D K + +L ++ K ++N D Sbjct: 214 NDDIIDVTTSQEQSGKPTNNDIH--KNSFVNLLGLEQAIKTKENLLNECEQD 263 >gi|255513478|gb|EET89744.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 340 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 84/324 (25%), Positives = 137/324 (42%), Gaps = 54/324 (16%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 +V+ I G RP+L + T M + V LA A + L+ DD +DDS RR Sbjct: 33 IVREYIDRQGNYRRPILLMLTGEMFGAPIEKLVQLAAAQQLSEEWLLIQDDAMDDSEFRR 92 Query: 93 GKVAARLVWGNQTSVLVGDFL------LSQAFCMVIETKSQEAL--EALSLVACTLAEG- 143 G ++G ++ D + + + + M + K+ A+ + ++ T+ EG Sbjct: 93 GGPTLHKMYGWIHAINASDTINVTMWKILKDYIMKFDPKNGNAIYDKFYDMIKYTI-EGQ 151 Query: 144 --ELRQLSLSKNLD-VTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGM 199 E + ++ +K+L +E Y + KT +++ ++ AG A K G Sbjct: 152 YIENKFINNTKDLSKASESMYFRIADGKTCYYTIYGPMQIGAMAAGAPEKAISAFKEIGT 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 N GIAFQ++DD+LD G+ GK D GK TL V+ A+ Sbjct: 212 NTGIAFQIMDDILDMAGDEKTFGKKRYGDLYEGKLTLIVLHAY----------------- 254 Query: 260 GKISVENLKKAFIIMRENRA---------LVD-------TEYR---AYSYGQKA----KD 296 GK S E KK I R++R+ LV+ EY A YG+ A +D Sbjct: 255 GKASPEERKKIDAIYRKSRSDKTEEEINWLVEIIKKYGGIEYAMKVADHYGELAEKALQD 314 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 ++ PD+ +K L + +R Sbjct: 315 NMDLFPDNEYKNILKSAIQAQYKR 338 >gi|328880104|emb|CCA53343.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl pyrophosphate synthetase [Streptomyces venezuelae ATCC 10712] Length = 350 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 107/247 (43%), Gaps = 38/247 (15%) Query: 62 DNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT-------------S 106 D+ LL A ++E +H A ++HDD++DDS LR G+ A + G + Sbjct: 69 DSDALLRAAASMELVHAAAVVHDDLIDDSPLRHGRPTAHVALGAAVRHHPRAADAARSLA 128 Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE-------- 158 +LVGD L+S A + + L A L +L+++L E Sbjct: 129 MLVGDLLMSLAGQLFATS---------GLPAAYLGRARPLWAALARDLIAGECLEILHTG 179 Query: 159 -----EDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 L VI+ KTA L + +AG +R+ +YG+ LG AFQL DD+L Sbjct: 180 GAPDTAASLKVIRYKTAKYTVEQPLLIGGALAGAGERLREGFSAYGLPLGEAFQLRDDLL 239 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 G+ + GK +D R +PT + ++ E+ ++ + + + L+ Sbjct: 240 GLFGDPHRTGKANADDVRGHRPTALLAETWRIAGPDERERLRALLGRDDLGEDGLEDVRE 299 Query: 273 IMRENRA 279 +MR +A Sbjct: 300 VMRRLKA 306 >gi|269794596|ref|YP_003314051.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM 10542] gi|269096781|gb|ACZ21217.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM 10542] Length = 361 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 38/257 (14%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLA---CAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GGKRLRP+L T + + G + L A A+E +HTA ++HDDV+D +RRG++ Sbjct: 57 GGKRLRPLLL--TGVYDQLGGTDTALAATIGAAVELLHTAFVVHDDVIDHDVVRRGRLNV 114 Query: 98 RLVW-----------------GNQTSVLVGDFLLSQA-----FCMVIETKSQEALEALSL 135 + G +L GD L+ A F + ++ + Sbjct: 115 SGTFAQRARAEGADDERAENLGAAAGILAGDLALTGAHRLVAFSDAPASTRRDLVHLFDH 174 Query: 136 VACTLAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQA 193 A GEL + S +L V D + + KTAV F L+ +++AG + Sbjct: 175 AVYVTAAGELSDVRYSLDLAPVGLADIVAMAAHKTAVYSFELPLQAGAVLAGADPRTVEW 234 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L G +G AFQL+DD+ G+ GK++ D R GK T P++ R+ + W Sbjct: 235 LSHVGRLVGTAFQLLDDIDGVFGDEQTTGKSVLTDLREGKLT-PLM-----AHARQTDAW 288 Query: 254 KST---INDGKISVENL 267 + + D ++ E + Sbjct: 289 PTISRFVGDASLTHEGV 305 >gi|126730373|ref|ZP_01746184.1| geranylgeranyl pyrophosphate synthetase [Sagittula stellata E-37] gi|126709106|gb|EBA08161.1| geranylgeranyl pyrophosphate synthetase [Sagittula stellata E-37] Length = 302 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 16/234 (6%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + ++Y + GGK LR + + A + + + A AIE +H +L+HDD+ Sbjct: 44 VAAAMRYAV-EGGKALRAFMVIEGARLFDIDRQHAAPAAGAIEALHAYSLVHDDLPCMDD 102 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 +RRGK W T+VL GD L + AF +V T A L LVA LR Sbjct: 103 DDMRRGKPTVHRKWDETTAVLAGDALQALAFQLVTHTAC-PADRRLELVAGLATAAGLRG 161 Query: 148 LSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 + + D+ T E+ + KT L S + +++AG L+ YG Sbjct: 162 MVGGQARDIAAESAQTPLTLEEITALQAGKTGALISWSCGAGAVMAGQSTG---PLRRYG 218 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 LG+AFQ+ DDVLD G+ +GK +G+D GK T +L + R + Sbjct: 219 DCLGLAFQIWDDVLDVEGDAATVGKAVGKDADRGKATFVSLLGMEGAKARAQEL 272 >gi|120402584|ref|YP_952413.1| polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1] gi|119955402|gb|ABM12407.1| Polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1] Length = 1155 Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 28/267 (10%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDDSALRRGKVAA 97 GGK +R L E R D L A A +E +HT L+ DDV+D S +RR + +A Sbjct: 849 LDGGKYVRSTYMYLGWLCGE-REDTAALRASASLELLHTFALIQDDVMDSSPMRRARPSA 907 Query: 98 RLV----------------WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV----- 136 + +G ++L+GD L A M+ +S +AL+ V Sbjct: 908 HVALGRWHRDRALSGSASRFGESAAILLGDLCLVWAEEML--RRSGVDADALARVWPRYD 965 Query: 137 --ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQA 193 LA G+L L S T + L V++ K+ LE+ + +AG V A Sbjct: 966 AMRTELAIGQLSDLLNSCQTFPTLPEVLDVLRRKSGNYTVRRPLELGAAMAGCSADVADA 1025 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L YG +G AFQL DD+L G + GK++ D +GK T V+ A++ R + Sbjct: 1026 LSGYGAAIGEAFQLRDDILGVFGSPSLTGKSVRSDLEDGKATSIVVAAYELAGPRLRRQL 1085 Query: 254 KSTINDGKISVENLKKAFIIMRENRAL 280 + +I ++ + ++R + A+ Sbjct: 1086 AELMQSPEIGAADVDRWRTLIRASGAV 1112 >gi|220912326|ref|YP_002487635.1| polyprenyl synthetase [Arthrobacter chlorophenolicus A6] gi|219859204|gb|ACL39546.1| Polyprenyl synthetase [Arthrobacter chlorophenolicus A6] Length = 364 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 89/340 (26%), Positives = 148/340 (43%), Gaps = 47/340 (13%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHT 76 I+ I D++ I + L+ +GGKRLR ++ + V A+E Sbjct: 32 IMSGISPDIDPIMGSISNLV-TGGKRLRALMCYWGWRGAGGDAGAAEVVTAGAALELFQA 90 Query: 77 ATLLHDDVVDDSALRRG--KVAARLV--------------WGNQTSVLVGDFLLS---QA 117 A L+HDD++D S RRG V R +G ++L GD LS +A Sbjct: 91 AALIHDDIIDRSDTRRGGPSVHRRFSQLHEAQGWALDSGRFGQAAAILAGDLCLSFSEEA 150 Query: 118 FCMVIETKSQEALEAL--SLVACTLAEGELRQLSLSKNLDVTEE------DYLHVI-KSK 168 F + E + + L +L+ + G+ LD+ EE D + +++ Sbjct: 151 FTDIGERAASGSRARLIFNLMRAEVMAGQY--------LDILEEVAGPVRDRAGAVSRAQ 202 Query: 169 TAVLFSAA-------LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 + + F +A L + +AG N + + ++ + LG AFQL DDVL G+ Sbjct: 203 SIIRFKSAKYSTEHPLALGGALAGATNDLLRGYSAFALPLGEAFQLRDDVLGVFGDPLTT 262 Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALV 281 GK G+D R GK T+ V LA + + E F S + ++ ++++ I+ ++ AL Sbjct: 263 GKPAGDDLREGKRTVLVALALDQASPAESAFIDSRLGSPELDDGDVQEIRRIIEDSGALQ 322 Query: 282 DTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320 TE YG A +L LP D K +L + + + R Sbjct: 323 ATEVLIGEYGNAAYGALEALPLDELPKTALRRLAEATVSR 362 >gi|227432104|ref|ZP_03914116.1| possible geranyltranstransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352131|gb|EEJ42345.1| possible geranyltranstransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 304 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 74/122 (60%), Gaps = 9/122 (7%) Query: 19 ILKRICSDVEMI-PD-----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAI 71 I +++ +D+ M PD ++KY + +GGKRLRP+LTLA +L +A AI Sbjct: 15 INQQLENDLSMASPDTDLVAMMKYAVLNGGKRLRPLLTLAVVTSFGESITPSILKVATAI 74 Query: 72 EFIHTATLLHDD--VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E++H+ +L+HDD V+D+ RRGK + ++G ++LVGD LL+ AF ++ S + Sbjct: 75 EWVHSYSLVHDDLPVMDNDMFRRGKPSVHALYGEANAILVGDALLTGAFGVIATANSSCS 134 Query: 130 LE 131 +E Sbjct: 135 VE 136 >gi|119504128|ref|ZP_01626209.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080] gi|119460131|gb|EAW41225.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080] Length = 297 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 16/223 (7%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA----IEFIHTATLLHDDV--VDDSA 89 Y +F GG R+RP L LA AL G++ LA A IE +H A+L+HDD+ DD+ Sbjct: 39 YAVFPGGARVRPRLCLAVALA---NGNSEPRLASAAAAAIELLHCASLVHDDLPCFDDAI 95 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLAEGELRQL 148 RRGK + +G + +VL GD L+ AF + E S ++ V +A G + Sbjct: 96 ERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVRMAQVTAIVAAGVGGPM 155 Query: 149 SLSKNLDVTEEDYL---HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + E + H ++KT LF AA + AGV + + + G ++G A+ Sbjct: 156 GICAGQAWECEPRVELEHYHQAKTGALFVAATCAGAAAAGVPS---EPWRELGNSIGEAY 212 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 Q+ DD+ D + +GK G D +P+ L Q KR Sbjct: 213 QVADDIQDAIADTATIGKPTGIDVALDRPSAVRELGLQGAVKR 255 >gi|225870049|ref|YP_002745996.1| geranyltranstransferase [Streptococcus equi subsp. equi 4047] gi|225699453|emb|CAW92957.1| putative geranyltranstransferase [Streptococcus equi subsp. equi 4047] Length = 289 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 12/193 (6%) Query: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 D H +A A+E IHT +L+HDD+ +D+ RRG++ + + T++L GD L F Sbjct: 58 DAHYAVAAAVEMIHTGSLIHDDLPAMDNDDYRRGRLTSHKQFNEATAILAGDSLFLDPFA 117 Query: 120 MVIETKSQ-----EALEALSLVACT--LAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAV 171 ++ + ++ SL + T + G+L + L D+ E +H +KT Sbjct: 118 LIAGADLPADLLVQLIQQFSLASGTFGMVGGQLLDMKGEHQLLDIQELSDIHA--NKTGK 175 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L + + +IA V L G +G AFQ+ DD+LD ++GK +D Sbjct: 176 LLTLPFVAAGIIAEQSADVLSCLWEAGRLVGQAFQIRDDILDLTASFADLGKTPQKDLAA 235 Query: 232 GKPTLPVILAFQR 244 K T P +L +R Sbjct: 236 AKSTYPSLLGLER 248 >gi|306841490|ref|ZP_07474190.1| geranyltranstransferase [Brucella sp. BO2] gi|306288454|gb|EFM59810.1| geranyltranstransferase [Brucella sp. BO2] Length = 229 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 12/181 (6%) Query: 67 LACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +A A+E IH +L+HDD+ LRRG+ + ++L GD LL+ AF ++ Sbjct: 4 VAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYAFDIIASD 63 Query: 125 KSQ-EALEALSLV-ACTLAEGELRQLSLSKNLDVTEE----DYLHVI---KSKTAVLFSA 175 +++ +A + LV A T A G L ++ + LD+ E D +I KT L Sbjct: 64 ETELDATTRIKLVCALTRASG-LGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 122 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A E ++IAG R+ + +G +G+AFQL DD+LD + MGK G+D GK T Sbjct: 123 ACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAGTMGKATGKDAAAGKAT 182 Query: 236 L 236 L Sbjct: 183 L 183 >gi|239631997|ref|ZP_04675028.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066682|ref|YP_003788705.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str. Zhang] gi|239526462|gb|EEQ65463.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439089|gb|ADK18855.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str. Zhang] Length = 283 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 10/215 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRG 93 Y + +GGKRLRP+L L+ M + + + A A+E++HT +L+HDD+ LRRG Sbjct: 34 YSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALEYVHTYSLIHDDLPAMDDDDLRRG 93 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGELRQLSLSK 152 K +G ++L GD LL+ AF ++ ++ + ++A + G + L Sbjct: 94 KPTNHKQFGEALAILAGDALLTDAFAILSRQYPEKGAACVQILAEAAGSNGMVGGQVL-- 151 Query: 153 NLDVTEEDY-LHVIK----SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 ++D E Y L +K +KT L AA+ + L+ + + + AL + G+ FQ+ Sbjct: 152 DMDGENEQYHLETLKRMHEAKTGALIQAAIAMGGLLVTIPETDQTALADFSAAFGLGFQI 211 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 DD+ D E+GK +D K T P +L Sbjct: 212 KDDINDVTKTTAELGKTADKDVIEHKNTFPELLGL 246 >gi|90580459|ref|ZP_01236265.1| Dimethylallyltransferase [Vibrio angustum S14] gi|90438368|gb|EAS63553.1| Dimethylallyltransferase [Vibrio angustum S14] Length = 298 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 11/202 (5%) Query: 31 PDVVKYLIF---SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 P + YL + S G + R + TA+ L + LLA +E +H A+L+HDDV D Sbjct: 36 PVTLSYLRYHQQSDGSQRRAKICYITAVSLGLNTNTAKLLAVTVELLHNASLIHDDVQDK 95 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLVACTLAEGEL 145 RRG+ A + + ++ +GD L+ A+ + I T + L+A C + Sbjct: 96 DQKRRGQDALWVKASVEEAICLGDTLIVAAYHALSKINTPANSHLQA---TVCRRVMETI 152 Query: 146 R-QL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 R Q+ LS L +TE+ Y + +K A L S ++E+ +L+AG + S+ +AL + + + Sbjct: 153 RGQMDDLSPQLPLTEQSYTLIATNKAAPLLSLSVELPALLAG-EPSLAKALSNAASSFAL 211 Query: 204 AFQLVDDVLDYRGEVNEMGKNI 225 A+Q DD+ D + NI Sbjct: 212 AYQFYDDLCDQAQDAINQEPNI 233 >gi|116495118|ref|YP_806852.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC 334] gi|227534867|ref|ZP_03964916.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|116105268|gb|ABJ70410.1| farnesyl-diphosphate synthase [Lactobacillus casei ATCC 334] gi|227187623|gb|EEI67690.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 283 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 14/217 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRG 93 Y + +GGKRLRP+L L+ M + + + A A+E++HT +L+HDD+ LRRG Sbjct: 34 YSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALEYVHTYSLIHDDLPAMDDDDLRRG 93 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK- 152 K +G ++L GD LL+ AF ++ S+E E + LAE + Sbjct: 94 KPTNHKQFGEALAILAGDALLTDAFAIL----SREYPEKGAACVQILAEAAGSNGMVGGQ 149 Query: 153 --NLDVTEEDY-LHVIK----SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 ++D E Y L +K +KT L AA+ + L + + + AL + G+ F Sbjct: 150 VLDMDGENEQYHLETLKRMHEAKTGALIQAAIAMGGLFVTIPETDQTALADFSAAFGLGF 209 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 Q+ DD+ D E+GK +D K T P +L Sbjct: 210 QIKDDINDVTKTTAELGKTADKDVIEHKNTFPELLGL 246 >gi|119872063|ref|YP_930070.1| polyprenyl synthetase [Pyrobaculum islandicum DSM 4184] gi|119673471|gb|ABL87727.1| Polyprenyl synthetase [Pyrobaculum islandicum DSM 4184] Length = 262 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 14/193 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLACAI-EFIHTATLLHDDVVDDS 88 DV++Y I + GK LRP+L L + L+ + + ++ A AI E +H +LL DDV+D Sbjct: 32 DVIRYYIETPGKLLRPILLLTFSYSLDRKSIFETKIIQAAAIVELLHIVSLLQDDVMDKH 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG R ++G+ S++ D++++++ ++ E +E L+ VA ++L Sbjct: 92 DERRGVKTPRALYGDGRSIVASDWIIAESIKRALQL-GPEVVEYLADVA--------QRL 142 Query: 149 SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 S+ + LD+ E Y + KTA L A L + ++ G + A K G LGI +Q Sbjct: 143 SIGQALDLDGE-YKKAAEFKTAPLIEATLVLPIILLGRRELFDTATK-LGRLLGILYQYS 200 Query: 209 DDVLDYRGEVNEM 221 DD D + E ++M Sbjct: 201 DDYSDEKREKDDM 213 >gi|312196601|ref|YP_004016662.1| polyprenyl synthetase [Frankia sp. EuI1c] gi|311227937|gb|ADP80792.1| Polyprenyl synthetase [Frankia sp. EuI1c] Length = 372 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 87/291 (29%), Positives = 128/291 (43%), Gaps = 53/291 (18%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------HVLLAC-AIEFIHTAT 78 +E++ V + ++ GGKRLR + +RG VL A A+E +H Sbjct: 50 LEVLVAVARQMVLGGGKRLRSVFAF-----WGWRGAAGPDRPVAPVLPALGALELLHACA 104 Query: 79 LLHDDVVDDSALRRG------KVAARLV---W-------GNQTSVLVGDFLLSQAFCMVI 122 L+HDDV+DDSA RRG VAAR V W G+ ++L+GD CMV Sbjct: 105 LVHDDVMDDSATRRGLPTAHRAVAARHVALGWPGDPDEFGHHAAILIGDL------CMVW 158 Query: 123 ETKSQEALEALSLVACTLAEGELRQ---------LSLSKNL--DVTE-EDYLHVIKSKTA 170 + E + T EG R L L N D + E L V + KTA Sbjct: 159 ADRLAGNAELPAATLLTAREGYDRMRLEAIAGQFLDLLGNAARDPSPVEHALRVARLKTA 218 Query: 171 -VLFSAALEVSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 L +++ G ++ + YG+ +G AFQL DD+L G+ + GK +GE Sbjct: 219 SYTVVRPLVYGAMLGGATGDGTLARVYTRYGLAVGEAFQLRDDLLGVYGDPHVTGKPVGE 278 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK-AFIIMREN 277 D G+ T+ V LA T E ++ + + S E+L + A +I R Sbjct: 279 DLLRGRSTVLVELARSSATGTEAAELRALL--ARRSPEDLPRLAALITRTG 327 >gi|18645048|gb|AAL76349.1| geranyltranstransferase [uncultured marine proteobacterium] Length = 313 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 16/223 (7%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA----IEFIHTATLLHDDV--VDDSA 89 Y +F GG R+RP L LA AL G++ LA A IE +H A+L+HDD+ DD+ Sbjct: 55 YAVFPGGARVRPRLCLAVALA---NGNSEPRLASAAAAAIELLHCASLVHDDLPCFDDAI 111 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLAEGELRQL 148 RRGK + +G + +VL GD L+ AF + E S ++ V +A G + Sbjct: 112 ERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVRMAQVTAIVAAGVGGPM 171 Query: 149 SLSKNLDVTEEDYL---HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + E + H ++KT LF AA + AGV + + + G ++G A+ Sbjct: 172 GICAGQAWECEPRVELEHYHQAKTGALFVAATCAGAAAAGVPS---EPWRELGNSIGEAY 228 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 Q+ DD+ D + +GK G D +P+ L Q KR Sbjct: 229 QVADDIQDAIADTATIGKPTGIDVALDRPSAVRELGLQGAVKR 271 >gi|239928994|ref|ZP_04685947.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672] Length = 308 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 5/181 (2%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H TLLHDDV+D RR + A V+G+ ++L GD L + A ++ E A Sbjct: 99 ELVHNFTLLHDDVMDRDTTRRHRPTAWTVFGDADAILAGDALQALALGLLAEDPHPAAPA 158 Query: 132 ALSLVACTLAE---GELRQLSLSKNL--DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A + +A + E G+ ++ + +VT + L + ++KT L A + +L A Sbjct: 159 AAARLAHCVVELCAGQHTDTAMERRGPGEVTLAETLTMAEAKTGALLGCACAIGALYADA 218 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +++ AL ++G G+AFQL+DDV+ G+ GK G D K +LPV+ A GT Sbjct: 219 EDADVAALDAFGREAGLAFQLIDDVIGIWGDPRRTGKPAGADLAARKKSLPVVAALTSGT 278 Query: 247 K 247 Sbjct: 279 P 279 >gi|149247108|ref|XP_001527979.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146447933|gb|EDK42321.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 504 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 3/99 (3%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + + N+ +VL GDFLL +A + ++ Sbjct: 187 LAEIVEMIHTASLLHDDVIDLSDSRRGRPSGNVAFTNKMAVLAGDFLLGRASVAIARLRN 246 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 E +E LS L EGE QL KN ++ ++ L++I Sbjct: 247 PEVIELLSTTIANLVEGEFMQL---KNTVMSSKEELNMI 282 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 5/162 (3%) Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 E YLH KTA L S + +++++G Q+ + + +G NLG+ FQ+VDD+LDY Sbjct: 346 EYYLHKTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLDYTSSD 405 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278 GK D + G T P++ A+++ + + + G + + A +++ + Sbjct: 406 ATFGKPSQADLKLGLATAPILFAWKKEPQLGELIARKFNQPGDVEI-----ARDAVQKYK 460 Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 L T A Y A ++LR LP+S + +L + + L R Sbjct: 461 GLEQTREMATKYCMSALENLRQLPESDARSALELLTNSVLTR 502 >gi|300934189|ref|ZP_07149445.1| putative polyprenyl diphosphate synthase [Corynebacterium resistens DSM 45100] Length = 389 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 122/281 (43%), Gaps = 49/281 (17%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM-LEYRGD---- 62 +L++ +N L + I +V+ I GGKR+RP A LE G Sbjct: 42 SLQEFWGINPLFTQAI--------EVMGDFIVGGGKRVRPTFAWAGIRAGLESSGTSTAK 93 Query: 63 -------------NHVLLA-CAIEFIHTATLLHDDVVDDSALRRGK-------------- 94 N L A A EFI L+HDD+VD S RRG Sbjct: 94 ASSRSQEEPTELANGFLSAISAFEFIQACALIHDDIVDQSDTRRGHPTVHREFERHHRDR 153 Query: 95 --VAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELRQ 147 + + +G ++L+GD L+ A +++++ + + A + + G++ Sbjct: 154 KWLGSSEHYGISQAILIGDLALAWADDLLLDSGLSTQRLHQCRHAWRAMRTEVIGGQILD 213 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSA-ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 +++ + + VIK KTA A L V + +AG + + L++ G ++G+AFQ Sbjct: 214 IAVEASGTENVDHAWDVIKYKTASYTVARPLHVGAALAGASEELIEFLRTIGEDIGVAFQ 273 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 L DD L G+ GK G+D R GK T+ + A + GT+ Sbjct: 274 LRDDQLGVFGDPAVTGKPSGDDLRTGKRTVLIDSALEMGTE 314 >gi|40062934|gb|AAR37805.1| polyprenyl synthetase [uncultured marine bacterium 442] Length = 292 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 16/223 (7%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA----IEFIHTATLLHDDV--VDDSA 89 Y +F GG R+RP L LA AL G++ LA A IE +H A+L+HDD+ DD+ Sbjct: 34 YAVFPGGARVRPRLCLAVALA---NGNSEPRLASAAAAAIELLHCASLVHDDLPCFDDAI 90 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLAEGELRQL 148 RRGK + +G + +VL GD L+ AF + E S ++ V +A G + Sbjct: 91 ERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVRMAQVTAIVAAGVGGPM 150 Query: 149 SLSKNLDVTEEDYL---HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + E + H ++KT LF AA + AGV + + + G ++G A+ Sbjct: 151 GICAGQAWECEPRVELEHYHQAKTGALFVAATCAGAAAAGVPS---EPWRELGNSIGEAY 207 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 Q+ DD+ D + +GK G D +P+ L Q KR Sbjct: 208 QVADDIQDAIADTATIGKPTGIDVALDRPSAVRELGLQGAVKR 250 >gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis] Length = 304 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 30/209 (14%) Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDS------ALRRGKVAARLVWGNQTSVLVGD 111 +Y + L+ A++ + L + +++++S A RRGK V+G + ++L GD Sbjct: 65 QYMKERATLIDAALD--KSVPLQYPEIINESMRYSLLAGRRGKPTNHKVYGEEIAILAGD 122 Query: 112 FLLSQAFCMVI-ETKSQEALEALSLVA----CTLAEGELRQLSLSKNLDVTEE------- 159 LLS +F + ET+ A L ++ +EG L + +D+ E Sbjct: 123 ALLSLSFEYIARETRGVAADRVLQVIVEVGKAVGSEG----LVAGQAVDIKSEGAGESVG 178 Query: 160 ----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 Y+H + KTAVL AA+ +++ G L+ Y ++G+AFQ+VDD+LD Sbjct: 179 LDTLQYIH--EHKTAVLLEAAVVSGAILGGATEVDVDRLRKYSRSIGLAFQVVDDILDIT 236 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 E+GK G+D + K T P ++ +R Sbjct: 237 ATTEELGKTAGKDLASAKTTYPSLVGLER 265 >gi|296242804|ref|YP_003650291.1| polyprenyl synthetase [Thermosphaera aggregans DSM 11486] gi|296095388|gb|ADG91339.1| Polyprenyl synthetase [Thermosphaera aggregans DSM 11486] Length = 365 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 116/264 (43%), Gaps = 40/264 (15%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVL--LACAIEFIHTATL 79 + + IP + + GGKR+R L L + GD + L +E + + L Sbjct: 33 VSPHLSSIPYIARDYTLRGGKRIRAFLALVGYWSKAWGTGDVDRVSKLMATLELLQSYLL 92 Query: 80 LHDDVVDDSALRRGKVAARLVW-----------------GNQTSVLVGDFLLSQAFCMVI 122 +HDD++D LRRG VW G ++ VGD+L + A + Sbjct: 93 VHDDIMDMDELRRGGPTVH-VWFKEECLKTRVSSNCAHYGVSQAITVGDYLEATAVENLA 151 Query: 123 ETK-SQEALEALSLVACTLAEGELRQLSLSKNLDV----------TEEDYLHVIKSKTAV 171 K EA E L T + G LR+++ + LDV E D L V K KTA Sbjct: 152 MLKLPGEAFEKL---ITTYSRG-LRKVAYGQYLDVLYSSLPLARVGENDILVVHKLKTAS 207 Query: 172 LFSAALEVS-SLIAGVQNSVR--QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 ++ L + IA ++ + R L SY + GIAFQL DD++ G+ GK G D Sbjct: 208 -YTVELPLHLGAIASLKYTDRLLNELSSYAIPAGIAFQLRDDIIGLFGDPRTTGKPSGSD 266 Query: 229 FRNGKPTLPVILAFQRGTKREKNF 252 R K TL +I A+Q + ++ F Sbjct: 267 VRGKKKTLLIIKAYQLASSSDREF 290 >gi|332295830|ref|YP_004437753.1| Polyprenyl synthetase [Thermodesulfobium narugense DSM 14796] gi|332178933|gb|AEE14622.1| Polyprenyl synthetase [Thermodesulfobium narugense DSM 14796] Length = 276 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 109/222 (49%), Gaps = 26/222 (11%) Query: 19 ILKRICSDVEMIPDVVK----YLIFSGGKRLRPMLTLATALMLEYR---GDNHVLLACAI 71 ++ + +E IPD K Y + SGGKR+RP+ + Y G +LA + Sbjct: 12 VISNFLAKLESIPDKTKELIIYSVLSGGKRIRPIFLINVVSESNYDTMLGLKEAILA--L 69 Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E +H A+L+HDD+ +D+ RRGK+ +G ++L GD L F ++ + ++ Sbjct: 70 ELMHCASLIHDDLPAIDNDDFRRGKLTLHKKYGEGPAILAGDALQIMPFNIL--SNIEDT 127 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTE----EDYLHVIKSKTAVLFSAALEVSSLIAG 185 A+ L+ + ++ + + LD++ E +++ KT LF A+L + ++ Sbjct: 128 NLAVKLIKILSDKAGVKGMIGGQILDISNIENFEQIYNIMALKTGALFEASLMMGGVVGR 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 +++ + L+ G ++G+ FQ++DD E KN GE Sbjct: 188 LEDKQIKNLEEIGKSIGLLFQILDD---------EKDKNSGE 220 >gi|313891715|ref|ZP_07825320.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E] gi|313119709|gb|EFR42896.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E] Length = 284 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 115/213 (53%), Gaps = 12/213 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +LK + +++ D + Y + S GKR+R L L M + ++ +A ++E +HT + Sbjct: 20 LLKTQRPEHKILFDSMNYSLLSNGKRIRGCLFLFILEMFKVDYLQYLDIAASVECVHTYS 79 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALE 131 L+HDD+ +D+ RRG + +G ++ GD LL+ AF ++ + K + +E Sbjct: 80 LIHDDLPCMDNDDYRRGILTNHKKYGEGVALQAGDALLTFAFQLISQAKFSAKDRCKLIE 139 Query: 132 ALSLVACT--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 LS+ A + G++ + + ++++++ E L K KT + A ++++ + + Sbjct: 140 ILSIAAGAEGMVAGQVHDIQIENRSIELDELKLLD--KFKTGRMIKAPVDMAIQLTHMSI 197 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 S + L+ + +LG+ FQ+ DD+LDY+ + NE+ Sbjct: 198 SDAEQLRKFAKHLGLLFQITDDILDYKEDNNEI 230 >gi|118464723|ref|YP_881525.1| polyprenyl synthetase [Mycobacterium avium 104] gi|254774993|ref|ZP_05216509.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291] gi|118166010|gb|ABK66907.1| polyprenyl synthetase [Mycobacterium avium 104] Length = 349 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 142/326 (43%), Gaps = 29/326 (8%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLL 80 I D + ++ + +GGKRLRP A+ E D +LL A+E +H L+ Sbjct: 23 IGDDYSGLIAALEEFVLNGGKRLRPAFAYWGWRAVATEAPDDQALLLFSALELLHACALV 82 Query: 81 HDDVVDDSALRRGKVAARL---------VW-------GNQTSVLVGDFLLSQAFCMV--I 122 HDDV+DDSA RRG+ + W G ++L+GD L+ A +V + Sbjct: 83 HDDVIDDSATRRGRPTTHVRFASLHRDRQWQGSPERFGMSAAILLGDLALAWADDIVLGV 142 Query: 123 ETKSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALE 178 + Q A + A E G+ + + + ++V KTA S L+ Sbjct: 143 DLTPQAARRVRRVWANIRTEVLGGQYLDIVAEASAAASIASAMNVDTFKTACYTVSRPLQ 202 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + A + V +G +LG+AFQL DDVL G+ GK G+D R+GK T+ + Sbjct: 203 LGAAAAADRPDVHDLFSQFGTDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTVLL 262 Query: 239 ILAFQRGTKREK---NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 A + K + + +I ++S + + ++ AL E R + Q+A Sbjct: 263 AEAVELAEKSDPLAAKLLRDSIG-AQLSDAEVDRLRDVIESVGALAAAEQRIATLTQRAL 321 Query: 296 DSLRCLP-DSSWKKSLMEVVDFCLQR 320 +L P +++ K L E+ R Sbjct: 322 ATLAAAPINTAAKAGLSELAKLATNR 347 >gi|291437332|ref|ZP_06576722.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC 14672] gi|291340227|gb|EFE67183.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC 14672] Length = 384 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 5/181 (2%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H TLLHDDV+D RR + A V+G+ ++L GD L + A ++ E A Sbjct: 175 ELVHNFTLLHDDVMDRDTTRRHRPTAWTVFGDADAILAGDALQALALGLLAEDPHPAAPA 234 Query: 132 ALSLVACTLAE---GELRQLSLSKNL--DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A + +A + E G+ ++ + +VT + L + ++KT L A + +L A Sbjct: 235 AAARLAHCVVELCAGQHTDTAMERRGPGEVTLAETLTMAEAKTGALLGCACAIGALYADA 294 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +++ AL ++G G+AFQL+DDV+ G+ GK G D K +LPV+ A GT Sbjct: 295 EDADVAALDAFGREAGLAFQLIDDVIGIWGDPRRTGKPAGADLAARKKSLPVVAALTSGT 354 Query: 247 K 247 Sbjct: 355 P 355 >gi|183983198|ref|YP_001851489.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium marinum M] gi|183176524|gb|ACC41634.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium marinum M] Length = 340 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 31/229 (13%) Query: 37 LIFSGGKRLRPMLTLA--TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 + SGGKRLRP+ A+ E + +LL A+E +H L+HDDV+D S+ RRG+ Sbjct: 25 FVLSGGKRLRPIFAYRGWQAVTTEDPDPDLLLLFSALELLHAWALIHDDVIDASSTRRGR 84 Query: 95 VAARLV---------W-------GNQTSVLVGDFLLSQAFCM-VIETKSQEALEALSLVA 137 A + W G ++L+GD ++QA+ +I SQ +L + Sbjct: 85 PTAHMHFAALHRDRNWLGPAQQFGISAAILIGD--VAQAWADDIISRVSQSSLSPDAQRR 142 Query: 138 CTLAEGELRQLSLS-KNLDVTEE--------DYLHVIKSKTAVL-FSAALEVSSLIAGVQ 187 ++R L + LD+ E + V KTA S L++ + A + Sbjct: 143 VQRVWSDIRTEVLGGQYLDIVAEASAADSITSAMTVATFKTACYTVSRPLQLGAAAAADR 202 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 V++A +G +LG+AFQL DDVL G+ GK G+D R+GK T+ Sbjct: 203 PDVQEAFHQFGTDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTV 251 >gi|240168232|ref|ZP_04746891.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium kansasii ATCC 12478] Length = 352 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 67/241 (27%), Positives = 105/241 (43%), Gaps = 27/241 (11%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLL 80 I SD + + ++ GGKRLRP+ A+ E G + L A+E +H L+ Sbjct: 23 IGSDYDALTAWLEDFALRGGKRLRPVFAYWGWHAVTTEEPGPEILQLFSALELLHAWALI 82 Query: 81 HDDVVDDSALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQAFCMVIET 124 HDDV+D S+ RRG+ A + W G ++L+GD + A +V E Sbjct: 83 HDDVIDASSTRRGRPTAHVHFAALHRERNWLGPAHQFGISAAILLGDVAQAWADDIVSEV 142 Query: 125 --------KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSA 175 ++ S + + G+ + + + + V KTA S Sbjct: 143 GQTSLPPDAARRVRRVWSGIRTEVLGGQYLDIVAEASAASSIASAMTVATFKTACYTVSR 202 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L++ A + V A +G +LG+AFQL DDVL G+ GK G+D R+GK T Sbjct: 203 PLQLGVAAAADRPDVAAAFHQFGTDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRT 262 Query: 236 L 236 + Sbjct: 263 V 263 >gi|226307057|ref|YP_002767017.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis PR4] gi|226186174|dbj|BAH34278.1| probable geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis PR4] Length = 379 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 31/257 (12%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH---- 64 L+D ++ I E ++ + GGKR+RP + A L GD + Sbjct: 36 LRDFFDSRRELVSNIGGGYEKAVSTLEAFVLRGGKRVRP--SFAWTGWLGAGGDPNGSDA 93 Query: 65 --VLLACA-IEFIHTATLLHDDVVDDSALRRGKVAARLV---------W-------GNQT 105 V+ ACA +E + L+HDD++D S RRG + W G Sbjct: 94 EAVIRACAALELVQACALVHDDIIDASTTRRGFPTVHVEFEDQHRGEEWSGDSAHFGEAV 153 Query: 106 SVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAE----GELRQLSLSKNLDVTEED 160 ++L+GD L+ A M+ E+ S +A +S V + G+ +S D T E Sbjct: 154 AILLGDLALAWADDMIRESGISPDAAARVSPVWSAMRTEVLGGQFLDISNEARGDETVEA 213 Query: 161 YLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 + V + KTA L + + + G + A +++G ++GIAFQL DD+L G+ + Sbjct: 214 AMRVNRYKTAAYTIERPLHLGAALFGADAELIDAYRTFGTDIGIAFQLRDDLLGVFGDPS 273 Query: 220 EMGKNIGEDFRNGKPTL 236 GK G+D GK T+ Sbjct: 274 VTGKPSGDDLIAGKRTV 290 >gi|85703102|ref|ZP_01034206.1| farnesyl diphosphate synthase [Roseovarius sp. 217] gi|85672030|gb|EAQ26887.1| farnesyl diphosphate synthase [Roseovarius sp. 217] Length = 287 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 26/229 (11%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAAR 98 GGKR+R L + +A + + + A AIE +H +L+HDD+ +D+ LRRG+ Sbjct: 38 GGKRIRGFLLMESARLHAVPETSALWPATAIEALHAYSLVHDDLPAMDNDDLRRGQPTVH 97 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEA-LSLVACTLAEGELRQLSLSKNLDV 156 + W T++LVGD L S AF +V A+ A L+L A G+ + L + LD+ Sbjct: 98 VKWDEATAILVGDALQSLAFELVAHPDCGPAAVRADLTLTLARAAGGQ--GMVLGQALDI 155 Query: 157 TEED-----------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA--LKSYGMNLGI 203 E L K+ +L+SA AG + ++ + L +Y LG+ Sbjct: 156 AAETATTPLSLDEITTLQAGKTGALILWSA-------TAGARMAMADSAPLSTYARALGL 208 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 AFQ+ DDV+D G+ GK +G+D GK T +L + R + Sbjct: 209 AFQIQDDVIDVTGDAAAAGKAVGKDAAAGKATFVSLLGLEGARTRATSL 257 >gi|300784232|ref|YP_003764523.1| geranylgeranyl pyrophosphate synthase [Amycolatopsis mediterranei U32] gi|299793746|gb|ADJ44121.1| geranylgeranyl pyrophosphate synthase [Amycolatopsis mediterranei U32] Length = 363 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 83/295 (28%), Positives = 124/295 (42%), Gaps = 49/295 (16%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH---------VLLACA-IEFIHTATLLH 81 D ++ + GGKRLRP +RG VL A A +E I L+H Sbjct: 41 DALRGFVLGGGKRLRPTFA-----WWGWRGAGGDPAGPDAEGVLQAVASLELIQACALIH 95 Query: 82 DDVVDDSALRRG---------KVAARLVW-------GNQTSVLVGDFLLSQAFCMVIETK 125 DD++D S RRG K+ A W G T+VLVGD L+ A M + Sbjct: 96 DDLIDSSDSRRGNPTVHIAGAKLHADRGWLGSPATFGLATAVLVGDLALAWADDMFADAD 155 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNL---------DVTEEDYLHVIKSKTAV-LFSA 175 L A +L A A +R L+ D + E L + + KTA Sbjct: 156 ----LPAETLAAARPAWRAMRTEVLAGQYLDVRTQATGDASVEAALKIDRLKTAAYTVQR 211 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L + + + G + L +G +G+AFQL DD+L G+ + GK G+D R GK T Sbjct: 212 PLHLGAALGGAAPELIATLLEFGGEVGVAFQLRDDLLGVFGDPSVTGKPAGDDLREGKRT 271 Query: 236 ----LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286 L + LA ++G + I D +S E ++ + +++ A+ E R Sbjct: 272 LLAALGLQLAAEKGEQAAATVIADAIGDADLSDEGVETVRMALQQVGAVEAVERR 326 >gi|315047945|ref|XP_003173347.1| geranylgeranyl pyrophosphate synthetase [Arthroderma gypseum CBS 118893] gi|311341314|gb|EFR00517.1| geranylgeranyl pyrophosphate synthetase [Arthroderma gypseum CBS 118893] Length = 368 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 7/230 (3%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK +R L A L+ ++ ++ + +HTA+LL DDV D S LRRG Sbjct: 67 YMVNQPGKDIRGQLIAAYNRWLQVPEESLTVITKVVVMLHTASLLIDDVEDSSHLRRGAP 126 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A + + K+ EA+ L G+ L L Sbjct: 127 VAHNIFGIPQTINSANYVYFLALEEIQKLKNPEAINIFVNELMNLHRGQGLDLYWRDTLT 186 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEEDYL ++ +KT LF A++ + ++SV +G+ FQ+ DD L+ Sbjct: 187 CPTEEDYLEMVGNKTGGLFRLAIK----LMQAESSVPIDCVPLVDLMGLMFQVCDDYLNL 242 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTINDGKI 262 K + ED GK + PVI + + + + N K ND ++ Sbjct: 243 SNPTYSKNKGLCEDLTEGKFSFPVIHSIRSQPENRQLINILKQKTNDNEV 292 >gi|221134021|ref|ZP_03560326.1| hypothetical protein GHTCC_03754 [Glaciecola sp. HTCC2999] Length = 292 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 4/192 (2%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D ++ +++Y S G R +++L + L R + V A +E +HTA+L+HDD+ Sbjct: 30 DDRLLSQMIQYHGTSQGNATRALISLYASDALHLRQQDAVAAASIVETLHTASLIHDDIQ 89 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-SLVACTLAEGE 144 D RRGK + +G ++ GDF LS+A+ + ++ L LV ++ + Sbjct: 90 DREPHRRGKPSLWHQFGEGPALCAGDFYLSKAYSHCADISQPTQIQRLIQLVHQSITQTI 149 Query: 145 LRQLS--LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA-LKSYGMNL 201 Q S S ++ T +DY + +K+ L AL + L+AG + Q +K Sbjct: 150 SGQTSDITSTDIRTTSQDYETIAINKSGPLLGLALRIPLLLAGYDDDETQVWMKQCIEPF 209 Query: 202 GIAFQLVDDVLD 213 +++Q+VDD+ D Sbjct: 210 ALSYQIVDDLFD 221 >gi|118618810|ref|YP_907142.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium ulcerans Agy99] gi|118570920|gb|ABL05671.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium ulcerans Agy99] Length = 340 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 31/229 (13%) Query: 37 LIFSGGKRLRPMLTLA--TALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 + SGGKRLRP+ A+ E + +LL A+E +H L+HDDV+D S+ RRG+ Sbjct: 25 FVLSGGKRLRPIFAYRGWPAVTTEDPDPDLLLLFSALELLHAWALIHDDVIDASSTRRGR 84 Query: 95 VAARLV---------W-------GNQTSVLVGDFLLSQAFCM-VIETKSQEALEALSLVA 137 A + W G ++L+GD ++QA+ +I SQ +L + Sbjct: 85 PMAHIHFAALHRDRNWLGPAQQFGISAAILIGD--VAQAWADDIISRVSQSSLSPDAQRR 142 Query: 138 CTLAEGELRQLSLS-KNLDVTEE--------DYLHVIKSKTAVL-FSAALEVSSLIAGVQ 187 ++R L + LD+ E + V KTA S L++ + A + Sbjct: 143 VQRVWSDIRTEVLGGQYLDIVAEASAADSITSAMTVATFKTACYTVSRPLQLGAAAAADR 202 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 V++A +G +LG+AFQL DDVL G+ GK G+D R+GK T+ Sbjct: 203 PDVQEAFHQFGTDLGVAFQLRDDVLGVFGDPAMTGKPSGDDLRSGKRTV 251 >gi|262411038|gb|ACY66885.1| geranyl geranyl pyrophosphate synthase [Linum usitatissimum] Length = 215 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 15/184 (8%) Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEAL 130 IHT +L+HDD+ +D+ LRRGK V+G +VL GD LL+ AF M + T A Sbjct: 1 IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHMAVSTVGVPAA 60 Query: 131 E--------ALSLVACTLAEGELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + A S+ + L G++ + N+ + + +++H+ KT L A++ + Sbjct: 61 KIVRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHL--HKTGALLEASVVLG 118 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G + + L+S+ +G+ FQ+V D+LD E+GK G+D K T P ++ Sbjct: 119 AILGGGTDEEVEKLRSFARCIGLLFQVVGDILDVTKSSQELGKTAGKDLVADKVTYPRLM 178 Query: 241 AFQR 244 + Sbjct: 179 GIDK 182 >gi|115753941|ref|XP_001195950.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115932639|ref|XP_001187762.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 165 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 7/161 (4%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-------MLEYRGDNHVLLACAIEFIH 75 +C + +V +Y GK RPM+ L + + E D+ +A E IH Sbjct: 2 LCGSCPELTEVAQYYFDGKGKSFRPMIVLLMSRVCNLHNSLTESIKDSQKKIAMITEMIH 61 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 TA+L+HDDV+D + RRGK + ++G + S+L GDF+LS + + + + LS Sbjct: 62 TASLMHDDVIDAADTRRGKTSINELFGQRKSILAGDFVLSISSQALARIGDPDVVIVLST 121 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 V L +GE QL N + YL KTA L + + Sbjct: 122 VIEDLVKGEFMQLGSKDNENERFSHYLMKTYKKTASLMAHS 162 >gi|288904840|ref|YP_003430062.1| farnesyl diphosphate synthase [Streptococcus gallolyticus UCN34] gi|288731566|emb|CBI13121.1| putative farnesyl diphosphate synthase [Streptococcus gallolyticus UCN34] Length = 289 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 73/264 (27%), Positives = 130/264 (49%), Gaps = 47/264 (17%) Query: 12 MEKVNFL--ILKRICSDVEMI-PDVVKYLIFS---GGKRLRPMLTLATALMLEYRG---- 61 M+K+N + ++R + +++ P++++ +++S GGK +RP++ L +LE G Sbjct: 1 MDKLNEINQAIRRYYAQSDVVSPELIEAILYSVEAGGKLIRPLIFLE---ILEGFGIELT 57 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 + H +A A+E IHT +L+HDD+ RRG++ + T++L GD L F Sbjct: 58 EGHFDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFG 117 Query: 120 MVIETKSQEALEALSLVACTLAE-------------------GELRQLSLSKNLDVTEED 160 +V + AL A + V C +AE GE R+L+LS E Sbjct: 118 LV----ANAALSADTKV-CLIAELSQASGTYGMVGGQMLDMKGEERKLNLS------ELQ 166 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 +H +KT L + + + ++A + ++L+ G +G+AFQ+ DD+LD E Sbjct: 167 LIHA--NKTGKLLTFPVVAAGIVANLAPDDLKSLREAGSLVGLAFQVRDDILDVTATFEE 224 Query: 221 MGKNIGEDFRNGKPTLPVILAFQR 244 +GK +D K T P +L ++ Sbjct: 225 IGKTPKKDLLADKTTYPSLLGLEK 248 >gi|68474524|ref|XP_718635.1| hypothetical protein CaO19.7478 [Candida albicans SC5314] gi|46440414|gb|EAK99720.1| hypothetical protein CaO19.7478 [Candida albicans SC5314] Length = 510 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 51/82 (62%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + + N+ +VL GDFLL +A + ++ Sbjct: 200 LAEIVEMIHTASLLHDDVIDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIARLRN 259 Query: 127 QEALEALSLVACTLAEGELRQL 148 E +E LS L EGE QL Sbjct: 260 PEVIELLSTTIANLVEGEFMQL 281 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 5/170 (2%) Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N++ E YLH KTA L S + +++++G Q+ + + +G NLG+ FQ+VDD+L Sbjct: 346 NVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDML 405 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 DY +GK D + G T P++ A+++ K + G + + A Sbjct: 406 DYTSSDKTIGKPSQADLKLGLATAPILFAWKQEPKLGDLIARKFNQPGDVEI-----ARR 460 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 + + + T+ A Y +A +LR LP+S + +L + + L R N Sbjct: 461 AVEKYDGVAQTKEMATMYCHQALKNLRVLPESEARSALELLTNSVLTRTN 510 >gi|57505616|ref|ZP_00371543.1| geranyltranstransferase (ispA) [Campylobacter upsaliensis RM3195] gi|57016163|gb|EAL52950.1| geranyltranstransferase (ispA) [Campylobacter upsaliensis RM3195] Length = 268 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 15/221 (6%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTAT 78 L +I S + + ++ +GGK R L L + L A A+EFIHT + Sbjct: 4 LPQIPSFHPFFNEALAVMLKAGGKYFRAQLLLNVVYFYKKERFKEALDAALALEFIHTYS 63 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +D++ RR + T++LVGD L ++AF +++ + A +L LV Sbjct: 64 LIHDDLPAMDNADFRRSTPTLHKSYDETTAILVGDALNTEAF-LLLSRLNLSATISLKLV 122 Query: 137 ACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L + + + +D ED +LH KTA L +A+L++ I + Sbjct: 123 ETLAFNAGLNGMIIGQAIDCYFEDQKLNLKELEFLHT--HKTAKLIAASLKMGCQICELD 180 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 ++ + L G+ LG+ FQ+ DD++D E GK D Sbjct: 181 ETITKQLYELGLKLGLIFQINDDIIDATLSEKESGKPTNAD 221 >gi|315639120|ref|ZP_07894287.1| geranyltranstransferase [Campylobacter upsaliensis JV21] gi|315480824|gb|EFU71461.1| geranyltranstransferase [Campylobacter upsaliensis JV21] Length = 277 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 15/221 (6%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTAT 78 L +I S + + ++ +GGK R L L + L A A+EFIHT + Sbjct: 13 LPQIPSFHPFFNEALAVMLKAGGKYFRAQLLLNVVYFYKKERFKEALDAALALEFIHTYS 72 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 L+HDD+ +D++ RR + T++LVGD L ++AF +++ + A +L LV Sbjct: 73 LIHDDLPAMDNADFRRSTPTLHKSYDETTAILVGDALNTEAF-LLLSRLNLSATISLKLV 131 Query: 137 ACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L + + + +D ED +LH KTA L +A+L++ I + Sbjct: 132 ETLAFNAGLNGMIIGQAIDCYFEDQKLNLKELEFLHT--HKTAKLIAASLKMGCQICELD 189 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 ++ + L G+ LG+ FQ+ DD++D E GK D Sbjct: 190 ETITKQLYELGLKLGLIFQINDDIIDATLSEKESGKPTNAD 230 >gi|209525924|ref|ZP_03274458.1| solanesyl diphosphate synthase [Arthrospira maxima CS-328] gi|209493601|gb|EDZ93922.1| solanesyl diphosphate synthase [Arthrospira maxima CS-328] Length = 132 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 5/128 (3%) Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L YG N+G+AFQ+VDD+LD+ G +GK D ++G T P + A EK F Sbjct: 9 LYKYGRNIGLAFQIVDDILDFTGSTESLGKPAASDLKSGNLTAPTLFALA-----EKPFL 63 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 ++ I+ +L++A +++E+ + + A + Q A + ++ LP S +++L+E+ Sbjct: 64 ETLIDREFAQDGDLEQAIALIQESSGIEKSRELAIHHAQVAVEHIKQLPPSESRQALVEL 123 Query: 314 VDFCLQRL 321 D+ + R+ Sbjct: 124 GDYVVSRI 131 >gi|297563839|ref|YP_003682812.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848288|gb|ADH70306.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 768 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 78/302 (25%), Positives = 130/302 (43%), Gaps = 25/302 (8%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V++ G+ R +++A + + + L A E +HT +L+ DDV D S LRRG Sbjct: 455 VRHTTAGLGRSWRSYVSMAAIELFGVDSEPYRPLVAAAELLHTGSLIVDDVEDRSPLRRG 514 Query: 94 KVAARLVWGNQTSVLVGD---FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ--- 147 + AA +V+G +V G F L + V+ + L + L G Q Sbjct: 515 RPAAHVVFGEAVAVNAGTAAYFALDRVLNRVLPDDAALRLRVYQVYLRVLRAGHGGQAID 574 Query: 148 -----LSLSKNLDVTE-EDYLHVIKS----KTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 ++ + ++ + E L ++S KTA E+ +L+AG + +AL Y Sbjct: 575 IAGHRAAMDEAVETGDAEALLRRVRSGHWLKTAAPVRGLAEIGALVAGAREEQFRALGEY 634 Query: 198 GMNLGIAFQLVDDVLDYRG--EVNEMG-----KNIGEDFRNGKPTLPVILAFQ-RGTKRE 249 +G+A+Q+ DDV+D RG E G K+ ED R GK T+P+ A +R Sbjct: 635 FDAVGLAYQISDDVMDLRGLTAPAEGGGRSATKHTAEDLRAGKVTMPLAHAVALLPPRRV 694 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + W + + DG + A + E A+ A ++ LR L +W Sbjct: 695 RELWYA-VRDGDADEATVAAAAASLEECGAVAACTGEARDLVERTWKPLRDLVPCTWASV 753 Query: 310 LM 311 +M Sbjct: 754 MM 755 >gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media] Length = 180 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 ++Y + +GGKR+RP L +A ++ D + ACA+E IHT +L+HDD+ +D+ R Sbjct: 1 MRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFR 60 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVACTLAE---- 142 RGK V+G T+VL GD LLS AF + S L +S + T++ Sbjct: 61 RGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELGKTISSQGLV 120 Query: 143 -GELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 G++ ++ N+D+ +++H+ KTAVL ++ ++ G ++ Y Sbjct: 121 GGQVVDITSEGDANVDLKTLEWIHI--HKTAVLLECSVVNGGILGGATEDEIARIRRY 176 >gi|289573627|ref|ZP_06453854.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis K85] gi|289538058|gb|EFD42636.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis K85] Length = 282 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 3/218 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-LATALMLEYRGDNHVLLACA 70 + ++ LI + E++ D V +L+ +GG RP+ T LA L + G + A Sbjct: 20 IARITELINSELSQADEVMRDTVAHLVDAGGTPFRPLFTVLAAQLGSDPDGWEVTVAGAA 79 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE +H TL HD VVD+S + R + W N ++L GD+ + A + + Sbjct: 80 IELMHLGTLCHDRVVDESDMSRKTPSDNTRWTNNFAILAGDYRFATASQLASRLDPEAFA 139 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A L G++R + T E YL V+ KT L +A+ ++ + ++G Sbjct: 140 VVAEAFA-ELITGQMRATRGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQ 198 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEM-GKNIGE 227 + + G +G AF++ D++ G+ + G ++G+ Sbjct: 199 IRRVARLGRMIGAAFEISRDIIAISGDSATLSGADLGK 236 >gi|323306067|gb|EGA59801.1| Coq1p [Saccharomyces cerevisiae FostersB] Length = 285 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 4/108 (3%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + N+ +VL GDFLL +A + + Sbjct: 178 LAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNXAFTNKMAVLAGDFLLGRATVSISRLHN 237 Query: 127 QEALEALSLVACTLAEGELRQL---SLSKNLDVTEEDY-LHVIKSKTA 170 E +E +S L EGE QL S+ ++D E + L + SK A Sbjct: 238 PEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKA 285 >gi|163841244|ref|YP_001625649.1| dimethylallyltransferase [Renibacterium salmoninarum ATCC 33209] gi|162954720|gb|ABY24235.1| dimethylallyltransferase [Renibacterium salmoninarum ATCC 33209] Length = 362 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 149/353 (42%), Gaps = 55/353 (15%) Query: 12 MEKVNFLILKR-----ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-- 64 +E FL +KR I D + D + L+ +GGKR+R +L +RG Sbjct: 19 LELQEFLAVKRNELAEISVDAPALIDTISGLV-TGGKRMRALLC-----YWGWRGAGGNP 72 Query: 65 ------VLLACAIEFIHTATLLHDDVVDDSALRRG---------KVAARLVW-------G 102 A+E A L+HDD++D S +RRG ++ R W G Sbjct: 73 ETSSPITTAGAALELFQAAALIHDDIIDRSDIRRGAPSVHRQFSQLHQRQRWALDPERFG 132 Query: 103 NQTSVLVGDFLLS---QAFCMVIETKSQEALEALSLVACTLAEGELRQL-----SLSKNL 154 + ++L GD LS + F + Q+A + + + G+ + S+ Sbjct: 133 HAAAILAGDLCLSFSEEVFSSINVPAPQKARSVFNTMRAEVMAGQYLDILEEVAGPSRGP 192 Query: 155 DVTEEDYLHVIKSKTAVLFSA-ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 + E +I+ K+A S L + +AG ++ ++ + LG AFQL DD+L Sbjct: 193 ENAVERAQSIIRYKSAKYSSEHPLVLGGALAGADANLLSGYSAFALPLGEAFQLRDDMLG 252 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI- 272 G+ GK G+D R GK T V++ + T R + ++ D ++ + +L +A I Sbjct: 253 VFGDPATTGKPAGDDLREGKRT--VLIGY---TLRLADSDQADFVDQRLGIPDLGEADIE 307 Query: 273 ----IMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320 IM A+ TE Y A ++L LP D + +L + +QR Sbjct: 308 QIRSIMVGCGAVAATEDLIGRYSDTAFEALDSLPIDENTMLALRSMAQAAVQR 360 >gi|31621279|gb|AAP59037.1| CrtE [Thiocapsa roseopersicina] Length = 288 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 108/255 (42%), Gaps = 14/255 (5%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVV--DDS 88 + V++ +F GG R+RP L LA A R A A IE +H A+L+HDD+ DDS Sbjct: 29 EAVRHAVFPGGARVRPRLCLAVAAACGSRDVEAADAAGASIELLHCASLVHDDLPCFDDS 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLV---ACTLAEG 143 LRRG + +G +VL GD L+ AF + S E L L + A + G Sbjct: 89 PLRRGLPSVHRAYGEPLAVLAGDALIVLAFENLARVLGNSPERLAPLLMTVSRAVGMPSG 148 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + V+ DY H K+ + A + A + G +G Sbjct: 149 IVAGQAWECEPKVSVADY-HRAKTGALFAAATAAGAQV-----AGADADAWRVVGDKIGE 202 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 A+Q+ DD+ D E+GK +G D +P+ L + K I+ Sbjct: 203 AYQVADDLRDVAASAQEVGKPVGRDAVLNRPSAAGELGVDGAVALLRGLVKGAIDAIPPC 262 Query: 264 VENLKKAFIIMRENR 278 + + A ++M E+R Sbjct: 263 PGSAQLAEVLMSESR 277 >gi|191638624|ref|YP_001987790.1| Farnesyl-diphosphate synthase [Lactobacillus casei BL23] gi|190712926|emb|CAQ66932.1| Farnesyl-diphosphate synthase [Lactobacillus casei BL23] Length = 280 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 10/215 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRG 93 Y + +GGKRLRP+L L+ M + + + A A+E++HT +L+HDD+ LRRG Sbjct: 31 YSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALEYVHTYSLIHDDLPAMDDDDLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGELRQLSLSK 152 K +G ++L GD LL+ AF ++ ++ + ++A + G + L Sbjct: 91 KPTNHKQFGEALAILAGDALLTDAFAILSRQYREKGAACVQILAEAAGSNGMVGGQVL-- 148 Query: 153 NLDVTEEDY-LHVIK----SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 ++D E Y L +K +KT L AA+ + L + + + AL + G+ FQ+ Sbjct: 149 DMDGENEQYHLETLKRMHEAKTGALIQAAIAMGGLFVTIPETDQTALADFSAAFGLGFQI 208 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 DD+ D E+GK +D K T P +L Sbjct: 209 KDDINDVTKTTAELGKTADKDVIEHKNTFPELLGL 243 >gi|297599729|ref|NP_001047684.2| Os02g0668100 [Oryza sativa Japonica Group] gi|255671156|dbj|BAF09598.2| Os02g0668100 [Oryza sativa Japonica Group] Length = 349 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 22/209 (10%) Query: 28 EMIPDVVKYLIFSGG------KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 E I ++Y + G KR P+L +A +L + + A A+E +H A+L+H Sbjct: 74 ERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPREAALPAAVALEMLHAASLVH 133 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALE------- 131 DD+ D + RRG+ + +G +VL GD L A+ VI T S + + Sbjct: 134 DDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRV 193 Query: 132 ----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A ++ + +A G+ L L+ + E + + V+ K + + +++ G Sbjct: 194 LGELARAVGSTGMAAGQF--LDLAGATALGEAEVMKVLTKKFGEMAECSAACGAMLGGAG 251 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 AL+ YG +G+ +QLVDD+ G Sbjct: 252 PDEEAALRRYGRTIGVLYQLVDDIRSASG 280 >gi|323356561|ref|YP_004222957.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum StLB037] gi|323272932|dbj|BAJ73077.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum StLB037] Length = 363 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 47/244 (19%) Query: 41 GGKRLRPMLTL--------ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 GGKRLR L +TA + +A A+E A L+HDD++D+S RR Sbjct: 46 GGKRLRARFCLTGWRAVAESTAARTVAPAAAAISVAAALEIFQAAALVHDDIIDNSDTRR 105 Query: 93 GK----------------VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 G+ ++G +VL+GD L++ + ++ ++AL Sbjct: 106 GQPAAHRALEAAHAAAHWAGDAAMFGRSGAVLLGDLLVAWSDDLL-----EDALADQPTA 160 Query: 137 ACT--LAEGELRQLSLSKNLDVTEE-------DYLHVIKSKTAVLFSAA-------LEVS 180 + T L R +++ + LDV EE D H ++ + +A LE+ Sbjct: 161 SATRRLYAHMRRDVTIGQFLDVAEESAYAVYPDDQHAERALRVASYKSARYSIQKPLEIG 220 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + +AG + AL +G ++G+AFQL DDVL G+ GK +G+D R GK T V++ Sbjct: 221 AALAGADDDQLDALARFGHDVGMAFQLRDDVLGVFGDTAATGKPVGDDLREGKRT--VLV 278 Query: 241 AFQR 244 AF R Sbjct: 279 AFAR 282 >gi|327382666|gb|AEA54142.1| Geranylgeranyl diphosphate synthase [Lactobacillus casei LC2W] gi|327385860|gb|AEA57334.1| Geranylgeranyl diphosphate synthase [Lactobacillus casei BD-II] Length = 283 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 10/215 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRG 93 Y + +GGKRLRP+L L+ M + + + A A+E++HT +L+HDD+ LRRG Sbjct: 34 YSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALEYVHTYSLIHDDLPAMDDDDLRRG 93 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGELRQLSLSK 152 K +G ++L GD LL+ AF ++ ++ + ++A + G + L Sbjct: 94 KPTNHKQFGEALAILAGDALLTDAFAILSRQYREKGAACVQILAEAAGSNGMVGGQVL-- 151 Query: 153 NLDVTEEDY-LHVIK----SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 ++D E Y L +K +KT L AA+ + L + + + AL + G+ FQ+ Sbjct: 152 DMDGENEQYHLETLKRMHEAKTGALIQAAIAMGGLFVTIPETDQTALADFSAAFGLGFQI 211 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 DD+ D E+GK +D K T P +L Sbjct: 212 KDDINDVTKTTAELGKTADKDVIEHKNTFPELLGL 246 >gi|84514696|ref|ZP_01002060.1| geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis SKA53] gi|84511747|gb|EAQ08200.1| geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis SKA53] Length = 294 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 78/263 (29%), Positives = 119/263 (45%), Gaps = 19/263 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 +PD + Y GGK LR L + TA + A AIE IH +L+HDD+ Sbjct: 36 VPDAMIY-AARGGKALRAFLAIETARLHGVPPQVAAHAAAAIECIHAYSLIHDDLPCMDD 94 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE---ALSLVACT----L 140 LRRG+ W T+VL GD L + AF ++ +A + LSL + Sbjct: 95 DDLRRGQPTVHKRWDEATAVLAGDALQALAFELLGRLDCADAAKLDLTLSLAQAAGVRGM 154 Query: 141 AEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ ++ + ++ +T + + + KT L S A V +A + AL+ YG Sbjct: 155 VGGQAADIAAETADVPLTLDQIIALQAGKTGALMSWAALVGPRMALADQA---ALRLYGD 211 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS---T 256 LG+AFQ+ DDVLD G+ +GK +G+D GK T +L +R + Sbjct: 212 CLGLAFQIADDVLDVTGDAALVGKALGKDAAAGKATFVSLLGLDGAKRRAVDLVTQACDA 271 Query: 257 INDGKISVENLKKA--FIIMREN 277 ++D E LK A F+ R + Sbjct: 272 LSDYGDDAETLKDAARFVTARTH 294 >gi|217978204|ref|YP_002362351.1| Polyprenyl synthetase [Methylocella silvestris BL2] gi|217503580|gb|ACK50989.1| Polyprenyl synthetase [Methylocella silvestris BL2] Length = 289 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 10/232 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATLLHDDVV--DDSA 89 ++Y IF GG R+RP L LA + + A AIE +H A+L HDD+ DD+ Sbjct: 30 AIRYAIFPGGARIRPRLCLAVSAACGAQNLGASAAAAGAIELLHCASLAHDDLPCFDDAP 89 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRGK + +G +VL GD ++ AF I + L + T+A Sbjct: 90 TRRGKPSVHAAFGEALAVLAGDAMIVMAF-EAIARAFMDRPHLLPPLVQTIARAAGMPSG 148 Query: 150 LSKNLDVTEEDYL---HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 ++ E L ++KT LF + + A + + G LG A+Q Sbjct: 149 IAAGQGYESEPQLARSQYQRAKTGSLF---VAATVAGALAAGADGAPWRMLGEGLGEAYQ 205 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + DD+ D +GK +G D G+P+ + L R K + ++ Sbjct: 206 IADDIRDVASSPEAIGKPVGRDAALGRPSAALELGVDRAVALLKRLTREAVD 257 >gi|125540612|gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indica Group] Length = 344 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 22/209 (10%) Query: 28 EMIPDVVKYLIFSGG------KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 E I ++Y + G KR P+L +A +L + + A A+E +H A+L+H Sbjct: 69 ERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPREAALPAAVALEMLHAASLVH 128 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALE------- 131 DD+ D + RRG+ + +G +VL GD L A+ VI T S + + Sbjct: 129 DDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRV 188 Query: 132 ----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A ++ + +A G+ L L+ + E + + V+ K + + +++ G Sbjct: 189 LGELARAVGSTGMAAGQF--LDLAGATALGEAEVMKVLTKKFGEMAECSAACGAMLGGAG 246 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 AL+ YG +G+ +QLVDD+ G Sbjct: 247 PDEEAALRRYGRTIGVLYQLVDDIRSASG 275 >gi|50252136|dbj|BAD28132.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica Group] gi|215713481|dbj|BAG94618.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740753|dbj|BAG97409.1| unnamed protein product [Oryza sativa Japonica Group] gi|215767016|dbj|BAG99244.1| unnamed protein product [Oryza sativa Japonica Group] Length = 342 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 22/209 (10%) Query: 28 EMIPDVVKYLIFSGG------KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 E I ++Y + G KR P+L +A +L + + A A+E +H A+L+H Sbjct: 67 ERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPREAALPAAVALEMLHAASLVH 126 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALE------- 131 DD+ D + RRG+ + +G +VL GD L A+ VI T S + + Sbjct: 127 DDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRV 186 Query: 132 ----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A ++ + +A G+ L L+ + E + + V+ K + + +++ G Sbjct: 187 LGELARAVGSTGMAAGQF--LDLAGATALGEAEVMKVLTKKFGEMAECSAACGAMLGGAG 244 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 AL+ YG +G+ +QLVDD+ G Sbjct: 245 PDEEAALRRYGRTIGVLYQLVDDIRSASG 273 >gi|94676522|ref|YP_588724.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219672|gb|ABF13831.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 304 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 24/211 (11%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 +GGKRLRP L T + + + A AIE IH +L+HDD+ +D+ LRRGK Sbjct: 48 LTGGKRLRPFLIYQTGKLFGIKKHSLNAAAAAIECIHAYSLIHDDLPAMDNHKLRRGKPT 107 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTLAEGEL---RQL 148 + +G + ++L GD L + AF ++ + L+ + ++A + + L Sbjct: 108 CHIQFGEKIAILAGDALHTLAFTILANAQMPAIPIKVRLKMIEILANASGANGMCLGQAL 167 Query: 149 SLSKNLDVTEEDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQ 206 L + I S KT L AA+ + ++ AG ++ + L Y +G+AFQ Sbjct: 168 ELESQFKKMSAKAVETIYSYKTGALIRAAVHIGAIAAGNKSKLAINYLDRYATAIGLAFQ 227 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRN-GKPTL 236 + DD+ D I ED +N G+P L Sbjct: 228 VQDDLWD-----------ISEDNQNTGQPDL 247 >gi|120404508|ref|YP_954337.1| polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1] gi|119957326|gb|ABM14331.1| geranylgeranyl-diphosphate synthase [Mycobacterium vanbaalenii PYR-1] Length = 359 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 89/329 (27%), Positives = 138/329 (41%), Gaps = 35/329 (10%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLL 80 I + ++ + V+ + GGKRLRP A+ G + L A+E +H L+ Sbjct: 33 IGAGYAVLTEAVEEFVLRGGKRLRPAFAYWGWRAVAGTEPGPEALRLFSALELLHACALV 92 Query: 81 HDDVVDDSALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQAFCMVIET 124 HDDV+D SA RRG + W G ++L+GD L A +V Sbjct: 93 HDDVIDASATRRGLPTVHRIFAERHRSNNWLGSSEQFGLSAAILLGDVALVWADDIV--A 150 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE--------DYLHVIKSKTA-VLFSA 175 ++ +EA V A L + LD+ E L V KTA S Sbjct: 151 SAEIGVEAHRRVQRVWAAIRTEVLG-GQYLDIVNEATGAETVASALTVNIYKTASYTISR 209 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L++ + A V A G +LG+AFQL DDVL G+ GK G+D R+GK T Sbjct: 210 PLQLGAAAAADCPEVLSAFHELGTSLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRT 269 Query: 236 LPVILAFQRGTKREK---NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292 + + A + K ++ +++I ++ +K+ +++ AL E R + + Sbjct: 270 VLLAEAVELAEKHDQIAAKLLRTSIGT-DLTDAQVKEVCLVIESVGALAAVESRIDTLTR 328 Query: 293 KAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320 +A D L P D K L E+ R Sbjct: 329 RALDILNSAPIDVQAKAGLAELARMAANR 357 >gi|54023707|ref|YP_117949.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152] gi|54015215|dbj|BAD56585.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica IFM 10152] Length = 383 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 105/244 (43%), Gaps = 27/244 (11%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLT----LATALMLEYRGDNHVLLACA-IEFIHTATLLHD 82 E D ++ + GGKR RP L + VL ACA +E + L+HD Sbjct: 59 EEAADALEAFVLRGGKRTRPAFAWTGWLGAGGSPTAPEADAVLTACAALELVQACALVHD 118 Query: 83 DVVDDSALRR----------------GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 D++D S RR G +G ++L+GD L+ A MV + Sbjct: 119 DIIDSSRTRRRFPTVHVDFEQRHRERGWTGDPAHFGVSVAILIGDLALAWADDMVHASGL 178 Query: 127 QEAL-----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVS 180 A +L+ + G+L ++ D + E L + + KTA L + Sbjct: 179 DAAAIGRFAPVWALMRTEVLGGQLLDINGEAGRDDSVEAALRINRYKTAAYTVERPLHLG 238 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + IA + A +++G ++G+AFQL DD+L G+ GK G+D R GK T+ + Sbjct: 239 AAIADADAELVAAYRTFGTDIGVAFQLRDDLLGVFGDPEVTGKPSGDDLREGKRTVLLAE 298 Query: 241 AFQR 244 A +R Sbjct: 299 ALRR 302 >gi|116618696|ref|YP_819067.1| farnesyl-diphosphate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097543|gb|ABJ62694.1| farnesyl-diphosphate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 304 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 74/122 (60%), Gaps = 9/122 (7%) Query: 19 ILKRICSDVEMI-PD-----VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAI 71 I +++ +D+ M PD ++KY + +GGKRLRP+LTLA +L +A AI Sbjct: 15 INQQLENDLSMASPDADLVAMMKYAVLNGGKRLRPLLTLAVVTSFGESITPSILKVATAI 74 Query: 72 EFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 E++H+ +L+HDD+ +D+ RRGK + ++G ++LVGD LL+ AF ++ S + Sbjct: 75 EWVHSYSLVHDDLPAMDNDMFRRGKPSVHALYGEANAILVGDALLTGAFGVIATANSSCS 134 Query: 130 LE 131 +E Sbjct: 135 VE 136 >gi|262202475|ref|YP_003273683.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247] gi|262085822|gb|ACY21790.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247] Length = 377 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 143/330 (43%), Gaps = 40/330 (12%) Query: 27 VEMIPDVVK---YLI--FSGGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTAT 78 ++ PD+ YL+ SGGKRLR L A GD V A AIE H Sbjct: 50 ADIDPDIAPLADYLVRALSGGKRLRAAFCLWGARGAAG-GDLPAGAVDAAAAIELFHLGA 108 Query: 79 LLHDDVVDDSALRRG------KVAARLV----------WGNQTSVLVGDF-------LLS 115 L+HDDV+D S RRG + A R +G ++L GD +L+ Sbjct: 109 LIHDDVMDHSDRRRGMPTVHRRFADRHTADGLAGDPEAFGQAVAILAGDLCLMWSDEVLA 168 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGE----LRQLSLSKNLDVTEEDYLHVIKSKTAV 171 A Q A SL+ G+ L Q + + +L T LH +K V Sbjct: 169 DAVSAASPEIGQRARAVWSLMRDETVGGQYLDMLAQATPTTSLTRTRL-VLHYKSAKYTV 227 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + L + +AG + + A +S G+ G AFQL DD+L G+V GK + +D R Sbjct: 228 --AQPLRLGGALAGADDDLLDAYESLGLIAGEAFQLRDDLLGVFGDVATTGKPVIDDIRE 285 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 GK TL V +A +R ++ + ++ + ++ ++L ++ + A+ E R Sbjct: 286 GKRTLLVAVASERADPAQRLLLERSLGNPHLTDDDLVAVGRVLHDTGAVRHVEDRIDDLA 345 Query: 292 QKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320 +A ++ LP D + +L +V C+ R Sbjct: 346 AEALAAVETLPVDDVCRNALARLVSRCIWR 375 >gi|170574826|ref|XP_001892983.1| geranylgeranyl pyrophosphate synthetase [Brugia malayi] gi|158601230|gb|EDP38192.1| geranylgeranyl pyrophosphate synthetase, putative [Brugia malayi] Length = 306 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 9/222 (4%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLL 80 + DV + +Y++ GK+LR L A L+ D VL + +E +H A+L+ Sbjct: 1 MADDVAQLLAPYQYILKLPGKQLRSQLAKAFNFWLQV--DVEVLDSIMTVVEMLHNASLM 58 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 DD+ D S LRRG ++G ++ +++ A I EA+E + L Sbjct: 59 IDDIEDSSLLRRGLPVTHSIYGIARTINTANYVYFAALSRCILLGKFEAVEIFTEQLLEL 118 Query: 141 AEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ ++L + TEE+Y + KT LF+ +++ L Q + +K Sbjct: 119 HRGQGKELYWRDIVQCPTEEEYEQMAMQKTGGLFALTVQLMELFGKKQYDFKSLIK---- 174 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 NL I FQ+ DD ++ K ED GK + P+I+A Sbjct: 175 NLAIYFQIRDDYINLCSRTYAEQKTFAEDLTEGKFSFPIIVA 216 >gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 345 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 32/224 (14%) Query: 28 EMIPDVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDD 83 E I + ++Y + G KR P++ +A E G N + ACA+E +HTA+L+HDD Sbjct: 79 EQIYEAMRYSALAKGAKRAPPVMCVAAC---ELFGGNRLAAFPTACALEMVHTASLIHDD 135 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE---------- 131 + +DD RRG+ + ++G ++L GD L + ++ + Sbjct: 136 LPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHTPTGLVPEPRLLRVIAE 195 Query: 132 -ALSLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 A ++ + +A G+ L + ++ +E + +AV L+AG ++ Sbjct: 196 IARAVGSTGMAAGQFLDLEGGPSFVEFAQEKKYGEMSECSAV-------CGGLLAGAEDD 248 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 Q L+ YG +G+ +Q++DDVL E M K E RNGK Sbjct: 249 EIQRLRRYGRAVGVLYQVIDDVL----EAKAMNKENEEKRRNGK 288 >gi|34557991|ref|NP_907806.1| geranylgeranyl pyrophosphate synthase [Wolinella succinogenes DSM 1740] gi|34483709|emb|CAE10706.1| GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Wolinella succinogenes] Length = 286 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 18/213 (8%) Query: 31 PDVVKYL---IFSGGKRLRPMLTLAT-ALMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 P +YL + +GGKR RP L L + + + A A+E +HT +L+HDD+ Sbjct: 26 PHYNEYLWEMVRNGGKRFRPRLLLGVVSALAPLLVKSAYAPALALEILHTYSLIHDDLPA 85 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D++A RRG + + ++VL GD L + AF ++ + + ++LV + G Sbjct: 86 MDNAATRRGHPTLHVKYDEASAVLAGDALNTHAFYLLAQAPLGSDTK-VALVRELASAGG 144 Query: 145 LRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + L + LD E ++H+ KT L +A+L++ ++IA + + L+ Sbjct: 145 AGGMVLGQALDCYFEHQKLEIEKLRFIHL--HKTGRLIAASLKMGAIIAALSKEEQARLE 202 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 G+ LG+ FQ+ DD++D E GK D Sbjct: 203 EIGLKLGLLFQVQDDIIDATWSEEEAGKTTQND 235 >gi|163737897|ref|ZP_02145313.1| branched-chain amino acid aminotransferase [Phaeobacter gallaeciensis BS107] gi|163743327|ref|ZP_02150707.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis 2.10] gi|161383321|gb|EDQ07710.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis 2.10] gi|161388513|gb|EDQ12866.1| branched-chain amino acid aminotransferase [Phaeobacter gallaeciensis BS107] Length = 299 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 80/287 (27%), Positives = 132/287 (45%), Gaps = 26/287 (9%) Query: 9 LKDME-KVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 LKD + ++ + R+ D + + ++Y + +GGK LR L L +A + + Sbjct: 21 LKDAQTRITTHMDARLGGD-DALHAAMRYAV-TGGKMLRGFLVLESARLHGVAEAAALEA 78 Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A AIE IH +L+HDD+ LRRG+ W +VL GD L + AF ++ + + Sbjct: 79 ALAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEAMAVLAGDSLQTFAFELLADPR 138 Query: 126 SQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSA 175 AL+L+ A G+ +S + LD+ E H+ KT L S Sbjct: 139 IGP--HALTLIRGLAQASGKDGMVS-GQMLDIAAETATRPLDLEQITHLQNRKTGCLISW 195 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + +++AG + L+ Y LG+AFQ+ DD+LD G+ ++GK + +D GK T Sbjct: 196 SATAGAVMAGADEA---PLRRYADALGLAFQIADDILDVEGDAAKVGKAVRKDADAGKAT 252 Query: 236 LPVILAFQRGTKREKNFWKS---TINDGKISVENLKKA--FIIMREN 277 +L KR K + + + E LK F+I R++ Sbjct: 253 FVSLLGLDAAKKRAKTLMEQACDALTPYGDAAETLKDTARFVISRDS 299 >gi|242212320|ref|XP_002471994.1| predicted protein [Postia placenta Mad-698-R] gi|220728918|gb|EED82802.1| predicted protein [Postia placenta Mad-698-R] Length = 327 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 23/269 (8%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 SD + + + YLI GK +R + A L D ++ + +H A+LL DDV Sbjct: 32 SDEKSVLEPYTYLISHSGKDVRGQMINAFNEWLHVPKDQLAIIGRIVGMLHNASLLVDDV 91 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 DDS LRRG A ++G + +++ QAF V + Q + + L T+ E Sbjct: 92 EDDSQLRRGNPVAHKIYGIPQVINTANYVYFQAFQEV--SALQASCDKYDL--HTIVIDE 147 Query: 145 LRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L L + LD+ +E++Y+ ++ +KT LF A+ + ++A SV Sbjct: 148 LLNLHRGQGLDLLWRDTLTCPSEQEYIAMVNNKTGGLFRLAVRL--MMANATTSVGVDFI 205 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR------- 248 +GI FQ+ DD + R + K ED GK + P++ Sbjct: 206 PLVNLIGIYFQIRDDYCNLRSKNYAANKGYAEDLTEGKFSFPIVHGVNTDPNDRSLLSIL 265 Query: 249 EKNFWKSTINDGKIS-VENLKKAFIIMRE 276 +K T+ D +S +EN ++F R+ Sbjct: 266 QKRPSTPTLKDHAVSFLENRTRSFDYTRD 294 >gi|319787810|ref|YP_004147285.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317466322|gb|ADV28054.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 291 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 12/218 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 +++ GGKR+RP+L A L + L A A+E +H +L+HDD+ + Sbjct: 34 AMRHATLGGGKRMRPLLVYAAGTALGADEASLDLPAAAVELVHAYSLVHDDLPAMDDDDM 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQ 147 RRG+ + + T++L GD L + AF + + + L A SL + A G Sbjct: 94 RRGRPTVHVAFDEATAILAGDALQTLAFEALADAAAPAELRAGWMQSLARASGAGGMCGG 153 Query: 148 LSLSKNLDVTEE----DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 +L ++D T + L + S KT L AA+ + +L AG + + L Y LG Sbjct: 154 QAL--DIDATGSQLPLEALQRMHSLKTGALIRAAVRMGALGAGADEARLRQLDRYADALG 211 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +AFQ+ DD+LD +GK G+D K T P +L Sbjct: 212 LAFQVRDDLLDIEASSEALGKTAGKDVAQAKSTYPALL 249 >gi|403318|emb|CAA81272.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae] gi|1582566|prf||2118405G hexaprenyl pyrophosphate synthetase Length = 285 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 3/98 (3%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + N+ +VL GDFLL +A + + Sbjct: 178 LAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRATVSISRLHN 237 Query: 127 QEALEALSLVACTLAEGELRQL---SLSKNLDVTEEDY 161 E +E +S L EGE QL S+ ++D E + Sbjct: 238 PEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGH 275 >gi|119717308|ref|YP_924273.1| polyprenyl synthetase [Nocardioides sp. JS614] gi|119537969|gb|ABL82586.1| Polyprenyl synthetase [Nocardioides sp. JS614] Length = 358 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 25/222 (11%) Query: 40 SGGKRLRPMLTL--ATALMLEYRGDNHVLLACA-IEFIHTATLLHDDVVDDSALRRGKVA 96 SGGKR R A+ + + ++ ACA +E +H + L+HDD++D S RRG A Sbjct: 51 SGGKRFRAAFCYWGHRAVAADVPDETALVRACASLELLHASALVHDDLMDASDTRRGHPA 110 Query: 97 ARLV----------------WGNQTSVLVGDFLLSQA-----FCMVIETKSQEALEALSL 135 + +G ++L+GD LLS A C + + ALE Sbjct: 111 THRLFESEHRAAGWRGDPEQYGAAAAILLGDLLLSWADELLRRCGLPIAQVAPALEVFDR 170 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQAL 194 + G+ +S+ E + V++ K+A L + + +AG L Sbjct: 171 CRTEVIAGQFLDVSVQARGRADVETAMTVLRYKSAKYSIERPLHIGAALAGAGPETMAEL 230 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++G+ LG AFQL DD+L G+ GK G+D GK T+ Sbjct: 231 SAFGLPLGEAFQLRDDLLGVFGDPETTGKPAGDDLIEGKRTV 272 >gi|117164792|emb|CAJ88341.1| putative polyprenyl synthetase [Streptomyces ambofaciens ATCC 23877] Length = 357 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 19/255 (7%) Query: 32 DVVKYLIFSGGKRLRP-MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 ++++ L GGKR+R +L A L+ + D A +IE + T L+HDD++DDSA Sbjct: 45 ELLRDLSLRGGKRMRVVLLHEAARLVRDEPVDGLDAAALSIELLQTHGLVHDDLIDDSAT 104 Query: 91 RRGKVAARLVWGNQ----------TSVLVGDFLLSQAFCMVIETK-----SQEALEALSL 135 RRG + + +VL GD L+ + ++++ + Q +E + Sbjct: 105 RRGGPTTYHAYRERFPRHPQAALGLTVLAGDLALALSLRVLLDAELPVEVRQAMVEVQTR 164 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS--AALEVSSLIAGVQNSV-RQ 192 A G++ L V ++D LH + + +S A L + L AG Q + + Sbjct: 165 AATDTFVGQIADLERDFAPAVPDDDVLHDVADHKSARYSVLAPLYLGLLAAGEQPAAFEE 224 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+ Y +GI Q+ DD LD G+ MGK G D R G+ + V + E+ Sbjct: 225 ELRRYARLVGICGQMRDDYLDLFGDAAAMGKPTGTDLREGRRSYTVARLLSAVSGAERVL 284 Query: 253 WKSTINDGKISVENL 267 + + D + E + Sbjct: 285 VEGALGDRACTPETV 299 >gi|18313968|ref|NP_560635.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2] gi|18161541|gb|AAL64817.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2] Length = 263 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 16/203 (7%) Query: 20 LKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG--DNHVLLACAI-EFI 74 L+++ D+E + V+Y I + GK LRP+L L + L+ R D ++ A I E + Sbjct: 19 LQKVGEDLEPESLRKAVRYYIETPGKLLRPILLLTFSYTLDRRALMDPRLIQAATIIELL 78 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 H +LL DDV+D RRG R+++G+ ++L D+L++++ ++ E +E L+ Sbjct: 79 HVVSLLQDDVMDKHEERRGIKTPRVLYGDDRTILASDWLIAESIRRAVKL-GPEVVEYLA 137 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 VA L+ G+ + +LD E + KTA L A L + ++I + + + Sbjct: 138 DVAQRLSRGQ------ALDLDGERE---RAAELKTAPLIEATLVLPAIILR-RREILELA 187 Query: 195 KSYGMNLGIAFQLVDDVLDYRGE 217 K G +LG+ +Q DD+ D E Sbjct: 188 KKLGRSLGVLYQYSDDISDEGAE 210 >gi|329121102|ref|ZP_08249733.1| geranyltranstransferase [Dialister micraerophilus DSM 19965] gi|327471264|gb|EGF16718.1| geranyltranstransferase [Dialister micraerophilus DSM 19965] Length = 284 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 113/213 (53%), Gaps = 12/213 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +LK + +++ D + Y + S GKR+R L L M + ++ +A ++E +HT + Sbjct: 20 LLKTQRPEHKILFDSMNYSLLSNGKRIRGCLFLFILEMFKVDYLQYLDIAASVECVHTYS 79 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALE 131 L+HDD+ +D+ RRG + +G ++ GD LL+ AF ++ + K + +E Sbjct: 80 LIHDDLPCMDNDDYRRGILTNHKKYGEGVALQAGDALLTFAFQLISQAKFSAEDRCKLIE 139 Query: 132 ALSLVACT--LAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 LS+ A + G++ + + +K++++ E L K KT + ++++ + + Sbjct: 140 ILSIAAGAEGMVAGQVHDIQIENKSIELDELKLLD--KFKTGRMIKTPVDMAIQLTHMSI 197 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 S L+ + +LG+ FQ+ DD+LDY+ + NE+ Sbjct: 198 SDADQLRKFAKHLGLLFQITDDILDYKEDNNEI 230 >gi|57833856|ref|NP_822197.2| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] gi|57546763|dbj|BAC68732.2| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] Length = 413 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 89/192 (46%), Gaps = 24/192 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK------VAARLV----------WGNQTSVLVG 110 + A+E I T L+HDDV+D S LRRG+ V+A+ +G ++L G Sbjct: 101 VGAALELIQTCALVHDDVMDGSRLRRGRPALHTDVSAQYADAVLPAPGTRFGEAAAILAG 160 Query: 111 DFLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 D L+ A +V +T + E S + + G+ + +E + Sbjct: 161 DLALAWADDVVADTDLAPDPGRRVREVWSCLRMEMVAGQYLDIQGQATSSHSEARAMRAA 220 Query: 166 KSKTAVLFSA--ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 K+A L+S LE+ + +AG + QAL S G +G+AFQL DD+ D E GK Sbjct: 221 CLKSA-LYSVQRPLELGAALAGADTATTQALCSAGRCVGLAFQLRDDLHDVFEEPRRTGK 279 Query: 224 NIGEDFRNGKPT 235 G D R GKPT Sbjct: 280 PSGGDIRAGKPT 291 >gi|55979982|ref|YP_143279.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB8] gi|73535442|pdb|1WMW|A Chain A, Crystal Structure Of Geranulgeranyl Diphosphate Synthase From Thermus Thermophilus gi|73535443|pdb|1WMW|B Chain B, Crystal Structure Of Geranulgeranyl Diphosphate Synthase From Thermus Thermophilus gi|73535444|pdb|1WMW|C Chain C, Crystal Structure Of Geranulgeranyl Diphosphate Synthase From Thermus Thermophilus gi|73535445|pdb|1WMW|D Chain D, Crystal Structure Of Geranulgeranyl Diphosphate Synthase From Thermus Thermophilus gi|31745059|dbj|BAC77651.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus] gi|55771395|dbj|BAD69836.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB8] Length = 330 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 12/232 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L R+ + D+++ GGK LR +LT+ +AL + + A A+E Sbjct: 16 LLARLDHPDPLYRDLLQDYPRRGGKMLRGLLTVYSALAHGAPLEAGLEAATALELFQNWV 75 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEAL 133 L+HDD+ D S RRG+ A + ++ GD + ++ + ++ E ++ E L Sbjct: 76 LVHDDIEDGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAEGLARGLFPPEVLLEF 135 Query: 134 SLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSV 190 V A G+ L +L D+ EDY ++ K A + A L + +L+AG + Sbjct: 136 HEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTAVAPLRLGALLAG--KTP 193 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 A + G+ LG AFQ+VDDVL+ G GK D GK TL ++L F Sbjct: 194 PAAYEEGGLRLGTAFQIVDDVLNLEGG-EAYGKERAGDLYEGKRTL-ILLRF 243 >gi|83768519|dbj|BAE58656.1| unnamed protein product [Aspergillus oryzae] Length = 312 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 13/220 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S ++I + YL+ SGGK +R L LA L+ + +++ + +HTA+LL DD+ Sbjct: 21 SSEQIICGPLDYLLSSGGKNIRHKLMLAFNEWLQIPPEKAEIISEIVNLLHTASLLIDDI 80 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGD---FLLSQAFCMVIETKSQEA-LEALSLVACTL 140 D S LRRGK A ++G ++ + FL Q + T++ + +E L L Sbjct: 81 QDSSKLRRGKPVAHSIFGVAQTINSANYAYFLAQQKLSSLHSTRANDVFVEEL----LNL 136 Query: 141 AEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ L L TEE Y+ ++ KT LF A+++ L + + Sbjct: 137 HRGQGMDLHWRDTLTCPTEEQYIGMVLDKTGGLFRLAVKLMQLESNQTCDCIPLTNT--- 193 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 LG FQ+ DD+L+ G K ED GK + P+I Sbjct: 194 -LGTIFQIRDDILNLSGGEYTKNKGFCEDITEGKFSFPII 232 >gi|15823920|dbj|BAB69143.1| geranylgeranyl pyrophosphase synthase [Streptomyces avermitilis] Length = 379 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 89/192 (46%), Gaps = 24/192 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK------VAARLV----------WGNQTSVLVG 110 + A+E I T L+HDDV+D S LRRG+ V+A+ +G ++L G Sbjct: 67 VGAALELIQTCALVHDDVMDGSRLRRGRPALHTDVSAQYADAVLPAPGTRFGEAAAILAG 126 Query: 111 DFLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 D L+ A +V +T + E S + + G+ + +E + Sbjct: 127 DLALAWADDVVADTDLAPDPGRRVREVWSCLRMEMVAGQYLDIQGQATSSHSEARAMRAA 186 Query: 166 KSKTAVLFSA--ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 K+A L+S LE+ + +AG + QAL S G +G+AFQL DD+ D E GK Sbjct: 187 CLKSA-LYSVQRPLELGAALAGADTATTQALCSAGRCVGLAFQLRDDLHDVFEEPRRTGK 245 Query: 224 NIGEDFRNGKPT 235 G D R GKPT Sbjct: 246 PSGGDIRAGKPT 257 >gi|15806412|ref|NP_295118.1| geranylgeranyl diphosphate synthase [Deinococcus radiodurans R1] gi|6459152|gb|AAF10966.1|AE001985_3 geranylgeranyl diphosphate synthase [Deinococcus radiodurans R1] Length = 329 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 82/164 (50%), Gaps = 5/164 (3%) Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 L+HDD+ DDS RRG+ A + G ++ VGD L + + V + A E + Sbjct: 79 LVHDDIEDDSEERRGRPALHHLCGMPVALNVGDALHAYMWAAVGKANVPGAFEEFLQMVY 138 Query: 139 TLAEGELRQLSL--SKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALK 195 AEG+ L+ + + DYL ++ KTA L + +L AG+ + + A Sbjct: 139 RTAEGQHLDLAWVEGREWGLRPADYLQMVGLKTAHYTVIVPLRLGALAAGM--APQDAFT 196 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 G+ LG AFQ+ DDVL+ G+ + GK IG D GK TL V+ Sbjct: 197 PAGLALGTAFQIRDDVLNLAGDPVKYGKEIGGDLLEGKRTLIVL 240 >gi|46200288|ref|YP_005955.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB27] gi|46197916|gb|AAS82328.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB27] Length = 330 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 12/232 (5%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L R+ + D+++ GGK LR +LT+ +AL + + A A+E Sbjct: 16 LLARLDHPDPLYRDLLQDYPRRGGKMLRGLLTVYSALAHGAPLEAGLEAATALELFQNWI 75 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEAL 133 L+HDD+ D S RRG+ A + ++ GD + ++ + ++ E ++ E L Sbjct: 76 LVHDDIEDGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAEGLARGLFPPEVLLEF 135 Query: 134 SLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFS-AALEVSSLIAGVQNSV 190 V A G+ L +L D+ EDY ++ K A + A L + +L+AG + Sbjct: 136 HEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTAVAPLRLGALLAG--KTP 193 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 A + G+ LG AFQ+VDDVL+ G GK D GK TL ++L F Sbjct: 194 PAAYEEGGLRLGTAFQIVDDVLNLEGG-EAYGKERAGDLYEGKRTL-ILLRF 243 >gi|323352034|gb|EGA84573.1| Bts1p [Saccharomyces cerevisiae VL3] Length = 301 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/225 (24%), Positives = 109/225 (48%), Gaps = 15/225 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I +++ GK R L + ++ D +++ +E +H ++LL DD+ D++ Sbjct: 22 LISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIEDNA 81 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG+ + L++G +++ +++ +A +V + ++E L +L+ T+ EL L Sbjct: 82 PLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEPLYH-NLI--TIFNEELINL 138 Query: 149 SLSKNLDV-----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + LD+ T+E YL+++ +KT LF L + ++ + +L + Sbjct: 139 HRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPF 197 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 LGI +Q+ DD L+ + K ED GK + P++ A Sbjct: 198 INLLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKLSFPIVHAL 242 >gi|25027199|ref|NP_737253.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens YS-314] gi|259506664|ref|ZP_05749566.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens YS-314] gi|23492480|dbj|BAC17453.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens YS-314] gi|259165748|gb|EEW50302.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens YS-314] Length = 374 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/250 (28%), Positives = 106/250 (42%), Gaps = 43/250 (17%) Query: 41 GGKRLRPMLTLATALMLEYRG-------DNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK +RP + L T + + + +A A E +H A L+HDDV+D RRG Sbjct: 58 GGKLVRPRMLLGTHRTMTADATAGTANREAALQIAVATELLHFAFLVHDDVIDGDLYRRG 117 Query: 94 KV---------------------AARLVWGNQTSVLVGDFLLS---QAFCMVIETKSQEA 129 K+ L W +L+G+ L+ Q F V + Sbjct: 118 KLNFIGQILKQRDPDNFSDRGPDPEHLHWACSNGILIGNLFLAATHQVFARV-DLPHPTR 176 Query: 130 LEALSLVACTLAE---GELRQLSLSKNLDVTE-EDYLHVIKSKTAVL-FSAALEVSSLIA 184 L L L+ T+ + GE + LS + L + + KTA F L ++++A Sbjct: 177 LRLLDLLDHTMNDSLVGEFLDVGLSSRAITPDISTALEMSRLKTATYTFELPLRAAAILA 236 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G+ Q + G +LG A+QL DD L GE E GK+ D R GK T I+ F R Sbjct: 237 GLSEEDEQKVGVIGTHLGTAYQLQDDYLSTFGEAAEHGKDSFSDLREGKET--TIIGFAR 294 Query: 245 GTKREKNFWK 254 T+ +WK Sbjct: 295 ATR----YWK 300 >gi|323331234|gb|EGA72652.1| Bts1p [Saccharomyces cerevisiae AWRI796] Length = 292 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 109/224 (48%), Gaps = 15/224 (6%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I +++ GK R L + ++ D +++ +E +H ++LL DD+ D++ Sbjct: 22 LISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIEDNA 81 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG+ + L++G +++ +++ +A +V + ++E L +L+ T+ EL L Sbjct: 82 PLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEPLYH-NLI--TIFNEELINL 138 Query: 149 SLSKNLDV-----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + LD+ T+E YL+++ +KT LF L + ++ + +L + Sbjct: 139 HRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPF 197 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 LGI +Q+ DD L+ + K ED GK + P++ A Sbjct: 198 INLLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKLSFPIVHA 241 >gi|260461762|ref|ZP_05810008.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] gi|319785307|ref|YP_004144783.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032403|gb|EEW33668.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] gi|317171195|gb|ADV14733.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 332 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 80/265 (30%), Positives = 135/265 (50%), Gaps = 30/265 (11%) Query: 2 KMLEDLTLKDMEK-VNFLILKRICSD----VEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 ++L ++ ++D K V + + +C++ E++ ++Y GGKR R +L LA + Sbjct: 30 RLLPEIWMQDGAKGVEQALARLLCAEDDGETELMA-AMRYATLHGGKRTRALLCLAAGAL 88 Query: 57 LEYRGDNHVL--LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDF 112 + HVL + AIE IH TL+HDD+ +D+ LRRG + +G T++LVGD Sbjct: 89 ADT--PAHVLEDVGAAIEMIHACTLVHDDLPAMDNDVLRRGLPTVHVKFGEATAILVGDA 146 Query: 113 LLSQAFCMVIETKS---------QEALEALSLVACTLAEGELRQLSL-SKNLDVTEEDYL 162 L + AF + + +E +A+S A A G+ + LSL K++++ + Sbjct: 147 LQAHAFLTLASLDAPGDNRIALVRELAQAVS--AEGAAGGQAKDLSLVGKHVELDRIVAM 204 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS----YGMNLGIAFQLVDDVLDYRGEV 218 H +KS L A++ + +L A +++ AL S Y G+A Q+VDD+LD + Sbjct: 205 HRMKS--GALVRASVRMGALCAITEDAAHAALYSALDRYSACFGLALQVVDDILDATADA 262 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQ 243 +GK G+D KPT I+ Q Sbjct: 263 AALGKTPGKDAAAQKPTCASIMGLQ 287 >gi|190407883|gb|EDV11148.1| hypothetical protein SCRG_02424 [Saccharomyces cerevisiae RM11-1a] Length = 335 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/238 (23%), Positives = 113/238 (47%), Gaps = 19/238 (7%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I +++ GK R L + ++ D +++ +E +H ++LL DD+ D++ Sbjct: 22 LISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIEDNA 81 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG+ + L++G +++ +++ +A +V + ++E L +L+ T+ EL L Sbjct: 82 PLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEPLYH-NLI--TIFNEELINL 138 Query: 149 SLSKNLDV-----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + LD+ T+E YL+++ +KT LF L + ++ + +L + Sbjct: 139 HRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPF 197 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ----RGTKREKN 251 LGI +Q+ DD L+ + K ED GK + P++ A +G + N Sbjct: 198 INLLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKVSFPIVHALNFTKTKGQTEQHN 255 >gi|315108190|gb|EFT80166.1| polyprenyl synthetase [Propionibacterium acnes HL030PA2] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 44/277 (15%) Query: 40 SGGKRLRPMLTL---ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG--- 93 +GGKRLRP A A + A ++EF+H + L+HDD++D S RRG Sbjct: 52 AGGKRLRPAFCYWGHAAAADQPIEPTGLLQAAASLEFLHVSALVHDDLMDHSDTRRGLPS 111 Query: 94 -----KVAARLVWGNQTS--------VLVGDFLL---SQAFCMVIETKSQEALEALSLVA 137 + A + G+ + +L+GD LL SQ F + ++A L A Sbjct: 112 VHRRFEAAHGIAHGDGPAEQFGCDIAILLGDLLLMWSSQMF-------TSAPVKADRLAA 164 Query: 138 CTLAEGELR-QLSLSKNLDVTEEDYLHVIKSKTA-------VLFSAA-------LEVSSL 182 T +R +++ + LDVT + + S++A V + A ++ Sbjct: 165 ATPLLDAMRTEVTCGQVLDVTSQSGMAGSDSESALDLVGRVVEYKCASYTVVRPCQIGVA 224 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AG + ++Q + +G +G AFQ DD+L G+ GK G+D R GK T+ V A Sbjct: 225 LAGGSDRLQQTMADFGSPIGRAFQYRDDLLGVFGDAELTGKPAGDDLREGKRTVLVAHAL 284 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279 R + KS + + +++ A I+ + A Sbjct: 285 DRADSHDAARLKSLLGRPDLDDDDVATARRIIETSGA 321 >gi|297623348|ref|YP_003704782.1| polyprenyl synthetase [Truepera radiovictrix DSM 17093] gi|297164528|gb|ADI14239.1| Polyprenyl synthetase [Truepera radiovictrix DSM 17093] Length = 338 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 22/225 (9%) Query: 31 PDVVKYLIF------SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 PDV + GGKRLR L L + + + +A A+E L+HDD+ Sbjct: 26 PDVSAFYALLRDYPARGGKRLRGTLLLLSTAAHGAPWERGLNVAAALELFQNWVLIHDDI 85 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA----------LEALS 134 DDS RRG+ A G ++ VGD L + ++ +A LEA Sbjct: 86 EDDSEDRRGRPALHRTAGVPVALNVGDALHIYMWRTLLRELRGDARAAPETLPRLLEAFE 145 Query: 135 LVACTLAEGELRQLSL--SKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVR 191 + AEG+ L+ +++E YL ++ KTA LE+ +L AG + R Sbjct: 146 WMISRTAEGQHLDLTWVAEGRFEISEAAYLEMVTLKTAYYTVVGPLELGALCAGAEPDPR 205 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 L+ G +LG+AFQ+ DDVL+ +V GK D K TL Sbjct: 206 --LRRAGEDLGVAFQIRDDVLNLMADVA-YGKEFAGDLFEAKRTL 247 >gi|93279242|pdb|2DH4|A Chain A, Geranylgeranyl Pyrophosphate Synthase gi|93279243|pdb|2DH4|B Chain B, Geranylgeranyl Pyrophosphate Synthase gi|149241336|pdb|2E8T|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium, Fspp And Ipp gi|149241337|pdb|2E8T|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium, Fspp And Ipp gi|149241342|pdb|2E8U|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Ipp (P21) gi|149241343|pdb|2E8U|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Ipp (P21) gi|149241348|pdb|2E8V|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Product Ggpp (P21) gi|149241349|pdb|2E8V|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Product Ggpp (P21) gi|149241352|pdb|2E8W|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Ipp gi|149241353|pdb|2E8W|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Ipp gi|149241356|pdb|2E8X|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|149241357|pdb|2E8X|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|149241362|pdb|2E90|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium, Pyrophosphate And Fpp gi|149241363|pdb|2E90|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium, Pyrophosphate And Fpp gi|149241366|pdb|2E91|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-91 gi|149241367|pdb|2E91|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-91 gi|149241372|pdb|2E92|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-261 gi|149241373|pdb|2E92|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-261 gi|149241378|pdb|2E93|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-629 gi|149241379|pdb|2E93|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-629 gi|149241382|pdb|2E94|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-364 gi|149241383|pdb|2E94|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-364 gi|149241388|pdb|2E95|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-675 gi|149241389|pdb|2E95|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-675 gi|187609232|pdb|2Z7H|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Inhibitor Bph-210 gi|187609233|pdb|2Z7H|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Inhibitor Bph-210 gi|193506615|pdb|2Z4V|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Ggpp (Inhibitory Site) gi|193506616|pdb|2Z4V|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Ggpp (Inhibitory Site) gi|193506617|pdb|2Z4W|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-749 gi|193506618|pdb|2Z4W|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-749 gi|193506619|pdb|2Z4X|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-252 (P21) gi|193506620|pdb|2Z4X|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-252 (P21) gi|193506621|pdb|2Z4Y|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-252 gi|193506622|pdb|2Z4Y|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-252 gi|193506623|pdb|2Z4Z|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-Sc01 gi|193506624|pdb|2Z4Z|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-Sc01 gi|193506625|pdb|2Z50|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-28 gi|193506626|pdb|2Z50|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-28 gi|193506627|pdb|2Z52|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-23 gi|193506628|pdb|2Z52|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-23 gi|193885258|pdb|2Z78|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-806 gi|193885259|pdb|2Z78|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-806 gi|193885260|pdb|2Z7I|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Inhibitor Bph-742 gi|193885261|pdb|2Z7I|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Inhibitor Bph-742 gi|218766582|pdb|2ZEU|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-715 gi|218766583|pdb|2ZEU|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-715 gi|218766584|pdb|2ZEV|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp And Bph-715 gi|218766585|pdb|2ZEV|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp And Bph-715 Length = 340 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/238 (23%), Positives = 112/238 (47%), Gaps = 19/238 (7%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I +++ GK R L + ++ D +++ +E +H ++LL DD+ D++ Sbjct: 27 LISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIEDNA 86 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG+ + L++G +++ +++ +A +V + ++E L +L+ T+ EL L Sbjct: 87 PLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEPLYH-NLI--TIFNEELINL 143 Query: 149 SLSKNLDV-----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + LD+ T+E YL+++ +KT LF L + ++ + + Sbjct: 144 HRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHHGHSLVPFI 203 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ----RGTKREKN 251 + LGI +Q+ DD L+ + K ED GK + P++ A +G + N Sbjct: 204 NL-LGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKLSFPIVHALNFTKTKGQTEQHN 260 >gi|70995862|ref|XP_752686.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293] gi|42820719|emb|CAF32032.1| geranylgeranyl pyrophosphate synthetase, putative [Aspergillus fumigatus] gi|66850321|gb|EAL90648.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293] gi|159131440|gb|EDP56553.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus A1163] Length = 387 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 19/223 (8%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK +R L A + L+ R ++ ++ + +HTA+LL DDV D+S LRRG Sbjct: 84 YMQQHPGKDIRRQLITAFNVWLQVRPESLSIITKVVGMLHTASLLVDDVEDNSILRRGIP 143 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + + A++ L G+ L L Sbjct: 144 VAHNIFGTAQTINSANYVYFLALQEVQKLNNPTAIDIFVQELLNLHRGQGMDLFWRDTLT 203 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-------LGIAFQL 207 TEEDYL ++ +KT LF A++ + QA + G++ +G+ FQ+ Sbjct: 204 CPTEEDYLDMVGNKTGGLFRLAIK-----------LMQAESTTGIDCVSLVNVMGLIFQI 252 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 DD L+ + K + ED GK + P+I + + + + Sbjct: 253 CDDYLNLSNKTYTQNKGLCEDLTEGKFSFPIIHSIRSNPRNHQ 295 >gi|242815971|ref|XP_002486676.1| polyprenyl-diphosphate synthase, putative [Talaromyces stipitatus ATCC 10500] gi|218715015|gb|EED14438.1| polyprenyl-diphosphate synthase, putative [Talaromyces stipitatus ATCC 10500] Length = 960 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 5/205 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL GK +R L + L+ ++ ++ I +HTA+LL DD+ D S LRRG+ Sbjct: 678 YLESLPGKNMRSQLIQSFNTWLQVPAESLAIIDKVISMLHTASLLIDDIQDQSLLRRGQP 737 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ G+++ A + + +S +A+ L G+ +L +L Sbjct: 738 VAHSIFGTAQAMNSGNYVYFLALREIQKLQSPKAITIYVDSLIDLHRGQGMELFWRDSLM 797 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEE+YL ++ +KT LF A+++ A V+ ++ LGI FQ+ DD L+ Sbjct: 798 CPTEEEYLDMVANKTGGLFCLAIQLMQAEATVKVDFVPLVRL----LGIIFQICDDYLNL 853 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVI 239 + K + ED GK + P+I Sbjct: 854 KSTAYTDNKGLCEDLTEGKFSFPII 878 >gi|289426213|ref|ZP_06427959.1| polyprenyl synthetase [Propionibacterium acnes SK187] gi|289426856|ref|ZP_06428582.1| polyprenyl synthetase [Propionibacterium acnes J165] gi|295130308|ref|YP_003580971.1| polyprenyl synthetase [Propionibacterium acnes SK137] gi|289153378|gb|EFD02093.1| polyprenyl synthetase [Propionibacterium acnes SK187] gi|289159945|gb|EFD08123.1| polyprenyl synthetase [Propionibacterium acnes J165] gi|291376896|gb|ADE00751.1| polyprenyl synthetase [Propionibacterium acnes SK137] gi|313764760|gb|EFS36124.1| polyprenyl synthetase [Propionibacterium acnes HL013PA1] gi|313772490|gb|EFS38456.1| polyprenyl synthetase [Propionibacterium acnes HL074PA1] gi|313791810|gb|EFS39921.1| polyprenyl synthetase [Propionibacterium acnes HL110PA1] gi|313802103|gb|EFS43335.1| polyprenyl synthetase [Propionibacterium acnes HL110PA2] gi|313807220|gb|EFS45707.1| polyprenyl synthetase [Propionibacterium acnes HL087PA2] gi|313809725|gb|EFS47446.1| polyprenyl synthetase [Propionibacterium acnes HL083PA1] gi|313813232|gb|EFS50946.1| polyprenyl synthetase [Propionibacterium acnes HL025PA1] gi|313815825|gb|EFS53539.1| polyprenyl synthetase [Propionibacterium acnes HL059PA1] gi|313818266|gb|EFS55980.1| polyprenyl synthetase [Propionibacterium acnes HL046PA2] gi|313820028|gb|EFS57742.1| polyprenyl synthetase [Propionibacterium acnes HL036PA1] gi|313823163|gb|EFS60877.1| polyprenyl synthetase [Propionibacterium acnes HL036PA2] gi|313825560|gb|EFS63274.1| polyprenyl synthetase [Propionibacterium acnes HL063PA1] gi|313827798|gb|EFS65512.1| polyprenyl synthetase [Propionibacterium acnes HL063PA2] gi|313830635|gb|EFS68349.1| polyprenyl synthetase [Propionibacterium acnes HL007PA1] gi|313833855|gb|EFS71569.1| polyprenyl synthetase [Propionibacterium acnes HL056PA1] gi|313838435|gb|EFS76149.1| polyprenyl synthetase [Propionibacterium acnes HL086PA1] gi|314915252|gb|EFS79083.1| polyprenyl synthetase [Propionibacterium acnes HL005PA4] gi|314918519|gb|EFS82350.1| polyprenyl synthetase [Propionibacterium acnes HL050PA1] gi|314919783|gb|EFS83614.1| polyprenyl synthetase [Propionibacterium acnes HL050PA3] gi|314925515|gb|EFS89346.1| polyprenyl synthetase [Propionibacterium acnes HL036PA3] gi|314931797|gb|EFS95628.1| polyprenyl synthetase [Propionibacterium acnes HL067PA1] gi|314956056|gb|EFT00454.1| polyprenyl synthetase [Propionibacterium acnes HL027PA1] gi|314958462|gb|EFT02565.1| polyprenyl synthetase [Propionibacterium acnes HL002PA1] gi|314960299|gb|EFT04401.1| polyprenyl synthetase [Propionibacterium acnes HL002PA2] gi|314963108|gb|EFT07208.1| polyprenyl synthetase [Propionibacterium acnes HL082PA1] gi|314968056|gb|EFT12155.1| polyprenyl synthetase [Propionibacterium acnes HL037PA1] gi|314973637|gb|EFT17733.1| polyprenyl synthetase [Propionibacterium acnes HL053PA1] gi|314976230|gb|EFT20325.1| polyprenyl synthetase [Propionibacterium acnes HL045PA1] gi|314978163|gb|EFT22257.1| polyprenyl synthetase [Propionibacterium acnes HL072PA2] gi|314983561|gb|EFT27653.1| polyprenyl synthetase [Propionibacterium acnes HL005PA1] gi|314987750|gb|EFT31841.1| polyprenyl synthetase [Propionibacterium acnes HL005PA2] gi|314990228|gb|EFT34319.1| polyprenyl synthetase [Propionibacterium acnes HL005PA3] gi|315077572|gb|EFT49630.1| polyprenyl synthetase [Propionibacterium acnes HL053PA2] gi|315080356|gb|EFT52332.1| polyprenyl synthetase [Propionibacterium acnes HL078PA1] gi|315084615|gb|EFT56591.1| polyprenyl synthetase [Propionibacterium acnes HL027PA2] gi|315085951|gb|EFT57927.1| polyprenyl synthetase [Propionibacterium acnes HL002PA3] gi|315088631|gb|EFT60607.1| polyprenyl synthetase [Propionibacterium acnes HL072PA1] gi|315096382|gb|EFT68358.1| polyprenyl synthetase [Propionibacterium acnes HL038PA1] gi|315098240|gb|EFT70216.1| polyprenyl synthetase [Propionibacterium acnes HL059PA2] gi|315101070|gb|EFT73046.1| polyprenyl synthetase [Propionibacterium acnes HL046PA1] gi|327325893|gb|EGE67683.1| putative polyprenyl synthetase [Propionibacterium acnes HL096PA2] gi|327330588|gb|EGE72334.1| putative polyprenyl synthetase [Propionibacterium acnes HL097PA1] gi|327332234|gb|EGE73971.1| putative polyprenyl synthetase [Propionibacterium acnes HL096PA3] gi|327442612|gb|EGE89266.1| polyprenyl synthetase [Propionibacterium acnes HL013PA2] gi|327445334|gb|EGE91988.1| polyprenyl synthetase [Propionibacterium acnes HL043PA2] gi|327447790|gb|EGE94444.1| polyprenyl synthetase [Propionibacterium acnes HL043PA1] gi|327451078|gb|EGE97732.1| polyprenyl synthetase [Propionibacterium acnes HL087PA3] gi|327452840|gb|EGE99494.1| polyprenyl synthetase [Propionibacterium acnes HL092PA1] gi|327453567|gb|EGF00222.1| polyprenyl synthetase [Propionibacterium acnes HL083PA2] gi|328753112|gb|EGF66728.1| polyprenyl synthetase [Propionibacterium acnes HL087PA1] gi|328753766|gb|EGF67382.1| polyprenyl synthetase [Propionibacterium acnes HL020PA1] gi|328759144|gb|EGF72760.1| polyprenyl synthetase [Propionibacterium acnes HL025PA2] gi|328760374|gb|EGF73943.1| putative polyprenyl synthetase [Propionibacterium acnes HL099PA1] gi|332675150|gb|AEE71966.1| bifunctional short chain isoprenyl diphosphate synthase [Propionibacterium acnes 266] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 44/277 (15%) Query: 40 SGGKRLRPMLTL---ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG--- 93 +GGKRLRP A A + A ++EF+H + L+HDD++D S RRG Sbjct: 52 AGGKRLRPAFCYWGHAAAADQPIEPTGLLQAAASLEFLHVSALVHDDLMDHSDTRRGLPS 111 Query: 94 -----KVAARLVWGNQTS--------VLVGDFLL---SQAFCMVIETKSQEALEALSLVA 137 + A + G+ + +L+GD LL SQ F + ++A L A Sbjct: 112 VHRRFEAAHGIAHGDGPAEQFGCDIAILLGDLLLMWSSQMF-------TSAPVKADRLAA 164 Query: 138 CTLAEGELR-QLSLSKNLDVTEEDYLHVIKSKTA-------VLFSAA-------LEVSSL 182 T +R +++ + LDVT + + S++A V + A ++ Sbjct: 165 ATPLLDAMRTEVTCGQVLDVTSQSGMAGSDSESALDLVGRVVEYKCASYTVVRPCQIGVA 224 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AG + ++Q + +G +G AFQ DD+L G+ GK G+D R GK T+ V A Sbjct: 225 LAGGSDRLQQTMADFGSPIGRAFQYRDDLLGVFGDAELTGKPAGDDLREGKRTVLVAHAL 284 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279 R + KS + + +++ A I+ + A Sbjct: 285 DRADSHDAARLKSLLGRPDLDDDDVATARRIIETSGA 321 >gi|156937132|ref|YP_001434928.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I] gi|156566116|gb|ABU81521.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I] Length = 271 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 105/192 (54%), Gaps = 4/192 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + +V KY++ +GGKRLR L + L ++ + A A+E +H ++L DD++D Sbjct: 29 ERVINVAKYIV-NGGKRLRGALVMLVNEALGGNPEDALPAALALELVHASSLSIDDIIDL 87 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 +RRG+ +A + G +V+V + L+ A M+++ + A++ + V +++GE+ Sbjct: 88 DFVRRGRPSAWVAKGVANTVMVSNLLIPHAI-MLVKRYGKRAIDKVVEVWWEVSKGEVWD 146 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + E Y +I++KTA +F+ + + L AG + + + L YG LG A+Q+ Sbjct: 147 VHGPPEGKGVEA-YEAIIEAKTASMFALSAYLGGLAAGEEERL-EGLWRYGFLLGKAYQI 204 Query: 208 VDDVLDYRGEVN 219 DD+ D G+ + Sbjct: 205 ADDLKDVEGDAS 216 >gi|257439493|ref|ZP_05615248.1| geranyltranstransferase [Faecalibacterium prausnitzii A2-165] gi|257198065|gb|EEU96349.1| geranyltranstransferase [Faecalibacterium prausnitzii A2-165] Length = 227 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 10/190 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 +Y + GGKR+R +L LA ML + A A+E +H +L+HDD+ +D+ L Sbjct: 35 AARYSLLGGGKRIRAVLVLAVCDMLNGSAEAAEQFAAAVEMLHCYSLIHDDLPCMDNDDL 94 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRGK + +G T++L GD LL++AF V+ + ++ A + Sbjct: 95 RRGKPSCHKAFGESTAMLAGDVLLTEAF-NVVANAPASPIVSVQAAKALGAGAGSHGMVY 153 Query: 151 SKNLDV-------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + LD+ TEE + ++KT L +AA+++ + A + + L+ Y +G+ Sbjct: 154 GQELDLKYEALAATEEQLRLIHRNKTGALINAAVQMGAAAAQANETQCKELEDYAFGIGL 213 Query: 204 AFQLVDDVLD 213 FQ+VDDVLD Sbjct: 214 VFQIVDDVLD 223 >gi|297171910|gb|ADI22897.1| geranylgeranyl pyrophosphate synthase [uncultured Rhizobium sp. HF0500_35F13] Length = 563 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 27/229 (11%) Query: 32 DVVKYLIFS-GGKRLRPMLTLAT--------------ALMLEYRGDNHVLLACAIEFIHT 76 + V Y S GGK RP +TLA A L D+ A +IE H Sbjct: 230 EAVAYDFLSKGGKHSRPFITLAVYDALTGGQATMAEGATFLAELPDSIRRTAMSIETFHK 289 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-------EA 129 A+L+HDD+ DD R G +G T++ VGD+L+ + V Q + Sbjct: 290 ASLVHDDIEDDDDFRYGDPTMHRRFGIPTAINVGDYLIGMGYRFVSNEAPQLGAAAAADI 349 Query: 130 LEALSLVACTLAEGELRQLSLSKNLD--VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L+ L+ L+EG+ +L LD + D L + KTA F AA+ +A Sbjct: 350 LDMLARAHTRLSEGQGAELMWRDALDKRLAPIDALKIYALKTAPAFEAAVLAGVRLARTV 409 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEV-NEMGKNIGEDFRNGKPT 235 + + ++ + NLG+AFQ+++D+ D++G+ N+M G D G+PT Sbjct: 410 AEIEEPVRGFARNLGVAFQILNDLGDWKGDADNKMAA--GLDALGGRPT 456 >gi|238490280|ref|XP_002376377.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus flavus NRRL3357] gi|317145287|ref|XP_001820658.2| farnesyltranstransferase [Aspergillus oryzae RIB40] gi|220696790|gb|EED53131.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus flavus NRRL3357] Length = 320 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 13/220 (5%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S ++I + YL+ SGGK +R L LA L+ + +++ + +HTA+LL DD+ Sbjct: 29 SSEQIICGPLDYLLSSGGKNIRHKLMLAFNEWLQIPPEKAEIISEIVNLLHTASLLIDDI 88 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGD---FLLSQAFCMVIETKSQEA-LEALSLVACTL 140 D S LRRGK A ++G ++ + FL Q + T++ + +E L L Sbjct: 89 QDSSKLRRGKPVAHSIFGVAQTINSANYAYFLAQQKLSSLHSTRANDVFVEEL----LNL 144 Query: 141 AEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ L L TEE Y+ ++ KT LF A+++ L + + Sbjct: 145 HRGQGMDLHWRDTLTCPTEEQYIGMVLDKTGGLFRLAVKLMQLESNQTCDCIPLTNT--- 201 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 LG FQ+ DD+L+ G K ED GK + P+I Sbjct: 202 -LGTIFQIRDDILNLSGGEYTKNKGFCEDITEGKFSFPII 240 >gi|300741252|ref|ZP_07071273.1| polyprenyl synthetase [Rothia dentocariosa M567] gi|300380437|gb|EFJ76999.1| polyprenyl synthetase [Rothia dentocariosa M567] Length = 380 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 42/305 (13%) Query: 40 SGGKRLRPMLTL------ATALMLEYRGDNHVLLA-CAIEFIHTATLLHDDVVDDSALRR 92 SGGKRLR +L+ +LE ++ A A+E +A L+HDD++D S RR Sbjct: 59 SGGKRLRALLSYWGWRGAGGESILERSAPTPIIRAGAALELFQSAALIHDDIIDRSDTRR 118 Query: 93 GK----------------VAARLVWGNQTSVLVGDFLLS---QAFCMVIET--KSQEALE 131 GK V +G ++ GD LS Q F + E EA Sbjct: 119 GKPSVHKKFETQHIQNSWVGDTFNYGLTGGIIAGDLCLSWSEQMFSSIGEGALSGTEARN 178 Query: 132 ALSLVACTLAEGELRQLSLSKNLDV-TEEDYL----HVIKSKTA-------VLFSAALEV 179 + + G+ + LS+ + T E+ L VI+ K+A ++ AL + Sbjct: 179 IFDTMRTEVMAGQYLDV-LSEVIPAETPENALARAHRVIQYKSAKYSCEHPLVLGGALAL 237 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++ IA + + + +++G+ LG FQL DD L GE + GK G+D R GK T+ + Sbjct: 238 TA-IAHQDHPILEKYRAFGLPLGEGFQLRDDELGVFGEPSATGKPAGDDIREGKRTVLIA 296 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 L Q + ++ + + + +++ + + K +M ++ AL E + +L Sbjct: 297 LTTQNISAEDRRMLEGALGNPELTNQQISKIRELMIDSGALEHVEELIAQKSEAVDTALH 356 Query: 300 CLPDS 304 LP S Sbjct: 357 ALPVS 361 >gi|184201731|ref|YP_001855938.1| geranylgeranyl pyrophosphate synthase [Kocuria rhizophila DC2201] gi|183581961|dbj|BAG30432.1| geranylgeranyl pyrophosphate synthase [Kocuria rhizophila DC2201] Length = 382 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 101/234 (43%), Gaps = 36/234 (15%) Query: 39 FSGGKRLRPMLTL---------ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 +GGK +RP LTL A + V LA + E +H A L+HDDVVD Sbjct: 68 LAGGKLIRPRLTLIAWRSFTAPAGGAVPSVPDAQCVRLAASFEMLHAALLVHDDVVDRDW 127 Query: 90 LRRGKVAARLVW-----------------GNQTSVLVGDFLLSQ-----AFCMVIETKSQ 127 RRG+ ++ G ++L GD LL+ + C S+ Sbjct: 128 RRRGRPTVGELFRRDAAAAGAPAHEAEHAGESAAILAGDLLLAGALRLASTCTGDPATSR 187 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTE----EDYLHVIKSKTAVL-FSAALEVSSL 182 + + A GEL L LS + E +D L + + KTA F A L SL Sbjct: 188 AVADVVFEAVTASAAGELDDLLLSLHRFGAEHPGVQDILDMERLKTATYSFEAPLRAGSL 247 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +AG + L G LG+ +Q+VDDVL G+ GK++ D R+GK T+ Sbjct: 248 LAGASAEESEQLAHAGALLGVGYQVVDDVLGTFGDPALTGKSVDADLRSGKATV 301 >gi|257067655|ref|YP_003153910.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM 4810] gi|256558473|gb|ACU84320.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM 4810] Length = 382 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 100/228 (43%), Gaps = 39/228 (17%) Query: 41 GGKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSALRRG---- 93 GGKR RP+L LA + G H V + A+E +HT+ ++ DDV+D RRG Sbjct: 45 GGKRARPVLLLAA--HEAFGGGRHEAAVQVGAALELLHTSFVIQDDVIDGDETRRGAPNL 102 Query: 94 --KVAA-------------RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLV 136 VAA RL G +L GD L A V + + L L Sbjct: 103 PGSVAAEAREQGASPAGSRRL--GVAAGILAGDLGLVAALRAVARCDAPGPVVDRLLDLF 160 Query: 137 ACTL---AEGELRQLSLSKNLDVTEE-----DYLHVIKSKTAVL-FSAALEVSSLIAGVQ 187 TL A GEL + L L E+ D L V + KTA F L +L+AG + Sbjct: 161 ESTLHTSAAGELADVRL--QLTPAEQPAALRDALAVAELKTAAYSFQLPLHAGALLAGAR 218 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + AL G LGI FQL+DD+L G+ GK+ D R GK T Sbjct: 219 PAQLTALDEVGALLGIGFQLIDDLLGVFGDEQRTGKSALGDLREGKRT 266 >gi|302688755|ref|XP_003034057.1| hypothetical protein SCHCODRAFT_15088 [Schizophyllum commune H4-8] gi|300107752|gb|EFI99154.1| hypothetical protein SCHCODRAFT_15088 [Schizophyllum commune H4-8] Length = 320 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 14/233 (6%) Query: 19 ILKRICSDVEMIPDVVK-------YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 IL R+ S+ P+ K YL+ + GK R L A L GD ++A + Sbjct: 7 ILARLSSESRWTPENEKAVLEPYEYLLSTPGKEFRTQLIDAFNKWLAVPGDTLQIIAKIV 66 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETKSQEAL 130 +H+A+L+ DD+ DDS LRRGK ++G ++ G+++ A+ +++ + + + Sbjct: 67 NMLHSASLMVDDIEDDSQLRRGKPVTHKIYGVPQTINTGNYVYFLAYRELLLLREPAKGI 126 Query: 131 EALSLVA---CTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + LV +L G+ +L +L TE++Y+ ++ +KT L + + + Sbjct: 127 DVEKLVTDELLSLHRGQGLELLWRDSLQCPTEDEYIDMVNNKTGGLLRIGIRL-MMACST 185 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 QN + + +G+ FQ+ DD+++ + K ED GK + PV+ Sbjct: 186 QNRDMNYIPLVNL-IGVFFQIRDDLMNLQSVEYSSNKGFAEDLTEGKFSFPVV 237 >gi|218961607|ref|YP_001741382.1| putative geranyltranstransferase [Candidatus Cloacamonas acidaminovorans] gi|167730264|emb|CAO81176.1| putative geranyltranstransferase [Candidatus Cloacamonas acidaminovorans] Length = 303 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 123/229 (53%), Gaps = 20/229 (8%) Query: 38 IFSGGKRLRPMLTLATALML----EYRGDNHVLLAC-AIEFIHTATLLHDDV--VDDSAL 90 + GGKR RP+L L+ ML ++R L + AIE +H ++HDD+ V + Sbjct: 50 VIPGGKRWRPLLLLSMFEMLTGFKKHRTFPDALKSSVAIELLHNGAIVHDDLPSVMNRTQ 109 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE-ALEALSLVA-CTLAEGEL--R 146 RRG+ A + +GN ++L D L S A+ ++ E K+ E +LEA+ +++ T + G + + Sbjct: 110 RRGQPALHIKYGNAIAILAADALYSLAYEIISELKNPEQSLEAIRILSNATKSYGMIGGQ 169 Query: 147 QLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 ++LS V + + L+ I K L A+ +++ L++ Q +++Y +NLGIA+ Sbjct: 170 VVALSSRHKVMKINTLNYIDMKKVGSLLQASADIACLLSRADEETHQVMRAYALNLGIAY 229 Query: 206 QLVDDV-LDY-RGEVNEMGKNIGEDFRN-GKPTLPVILAFQRGTKREKN 251 Q+++D+ DY RG + + E++ K + +L F + K +N Sbjct: 230 QMIEDIEADYSRG-----SEGLDEEYVPVSKASYTALLGFDKARKTVEN 273 >gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata] Length = 205 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 16/167 (9%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETK---SQEALEALS-LVACTLAEGE 144 RRGK +V+G +VL GD LLS +F + TK S L A+ L C +EG Sbjct: 4 FRRGKPTNHIVYGEDVAVLAGDALLSFSFEHITTATKGVSSDRILRAIGELAKCIGSEG- 62 Query: 145 LRQLSLSKNLDVTEE------DYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L + +DV E D+L I KTA L ++ + +++ G + + L+ + Sbjct: 63 ---LVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKF 119 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 ++G+ FQ+VDD+LD E+GK G+D GK T P +L ++ Sbjct: 120 ARSIGLLFQVVDDILDVTKSSEELGKTAGKDLVAGKTTYPKLLGIEK 166 >gi|171914615|ref|ZP_02930085.1| polyprenyl synthetase [Verrucomicrobium spinosum DSM 4136] Length = 589 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 17/190 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLAT--ALMLEYRG---DNHVLLACAIEFIHTATLLHDDVVD 86 ++ + + G R RP LT+A+ AL + G D+ A A+E H A+L+HDD+ D Sbjct: 260 EIAREWLARAGNRWRPFLTVASYQALREDPEGPLSDDLKKAAIAVECFHKASLVHDDIED 319 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 + A R G+ G ++ VGD L+ + + ++ ++ + L AEG+ R Sbjct: 320 NDAQRYGEATLHAEHGMPVALNVGDLLIGEGYRLLADSNVRADYRTAMLKIA--AEGQ-R 376 Query: 147 QLSLSKNLDVTEEDY---------LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 +L + ++ ++ L + +SKTA F AL++ + ++G + V +AL Y Sbjct: 377 ELCRGQGAELLWNNHPVALSSTQVLEIFRSKTAPAFEVALKIGAALSGRLDEVEEALHEY 436 Query: 198 GMNLGIAFQL 207 LGIA+Q+ Sbjct: 437 SEALGIAYQI 446 >gi|45709211|gb|AAH67768.1| GGPS1 protein [Homo sapiens] Length = 300 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ Q+A++ + L +G+ + N Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHQDAVKLFTRQLLELHQGQGLDIYWRDNY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|6325188|ref|NP_015256.1| Bts1p [Saccharomyces cerevisiae S288c] gi|74676512|sp|Q12051|GGPPS_YEAST RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=BET2 suppressor protein 1; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|1079673|gb|AAB68296.1| Bts1p: geranylgeranyl diphosphate synthase [Saccharomyces cerevisiae] gi|1098641|gb|AAA83262.1| Bts1p [Saccharomyces cerevisiae] gi|51013155|gb|AAT92871.1| YPL069C [Saccharomyces cerevisiae] gi|151942726|gb|EDN61072.1| geranylgeranyl diphosphate synthase [Saccharomyces cerevisiae YJM789] gi|207340526|gb|EDZ68851.1| YPL069Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256270516|gb|EEU05700.1| Bts1p [Saccharomyces cerevisiae JAY291] gi|259150089|emb|CAY86892.1| Bts1p [Saccharomyces cerevisiae EC1118] gi|285815470|tpg|DAA11362.1| TPA: Bts1p [Saccharomyces cerevisiae S288c] gi|323302759|gb|EGA56565.1| Bts1p [Saccharomyces cerevisiae FostersB] gi|323346212|gb|EGA80502.1| Bts1p [Saccharomyces cerevisiae Lalvin QA23] Length = 335 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/238 (23%), Positives = 113/238 (47%), Gaps = 19/238 (7%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I +++ GK R L + ++ D +++ +E +H ++LL DD+ D++ Sbjct: 22 LISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIEDNA 81 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG+ + L++G +++ +++ +A +V + ++E L +L+ T+ EL L Sbjct: 82 PLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEPLYH-NLI--TIFNEELINL 138 Query: 149 SLSKNLDV-----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + LD+ T+E YL+++ +KT LF L + ++ + +L + Sbjct: 139 HRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPF 197 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ----RGTKREKN 251 LGI +Q+ DD L+ + K ED GK + P++ A +G + N Sbjct: 198 INLLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKLSFPIVHALNFTKTKGQTEQHN 255 >gi|221119260|ref|XP_002166810.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase, subunit 1 [Hydra magnipapillata] Length = 186 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 4/177 (2%) Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 EL QL ++D YL KTA L + + + +L+A + V+ YG NLG+ Sbjct: 12 ELMQLVSKDDIDQRFNHYLTKTFRKTASLMANSCKSVALLANCSSIVQDMAFEYGKNLGM 71 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQLVDD LD +GK G D G T PV+ A Q+ + N Sbjct: 72 AFQLVDDALDIISSSETLGKPAGVDMSLGLATAPVLFAAQKFPDLHAIIGRRFKN----K 127 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 VE+++KA + ++ + +T A Y +A S+ L DS K +L+ + +F ++R Sbjct: 128 VEDVQKALEYVNQSDGVSETFMLASKYAMEACKSISSLKDSEEKAALITLANFVVER 184 >gi|221135092|ref|ZP_03561395.1| polyprenyl synthetase [Glaciecola sp. HTCC2999] Length = 294 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 12/221 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--R 91 ++Y + GKR+RP+L +L + L AIE IH +L+HDD+ D R Sbjct: 36 MEYALLGQGKRMRPLLISLVGDVLGVSKEKLAPLMVAIECIHAYSLVHDDLPDMDDDDLR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--------TLAEG 143 RG + + T++LVGD L S AF + + A E ++++ + G Sbjct: 96 RGMPTCHIQYTPGTAILVGDALQSLAFEHLAQHPVLSASEKVAVIQILAKASGYEGMCGG 155 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE-VSSLIAGVQNSVRQALKSYGMNLG 202 + L + N D+ E + + KT L A ++ V +L+ + + L ++ +LG Sbjct: 156 QAIDLHFT-NQDIDLETLTQLHRLKTGALLGACVDMVIALVPSLDVEHQALLHTFSRSLG 214 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +AFQ+ DD+LD + + +GK G D K T P +L Q Sbjct: 215 LAFQVQDDILDITSDSDTLGKPSGSDQDLNKSTFPALLGLQ 255 >gi|326404029|ref|YP_004284111.1| putative geranylgeranyl pyrophosphate synthase [Acidiphilium multivorum AIU301] gi|325050891|dbj|BAJ81229.1| putative geranylgeranyl pyrophosphate synthase [Acidiphilium multivorum AIU301] Length = 289 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 16/212 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVV--DDSA 89 +++ +F G R+RP L LA A R D V A+EF+H A+L+HDD+ DD+A Sbjct: 30 AMRHAVFPRGARVRPRLCLAVASACGADRFDAAVAAGAALEFLHCASLVHDDLPCFDDAA 89 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKSQEALEALSLVACTLAEG 143 RRG+ + +G +VL GD L+ AF C V + AL + A + G Sbjct: 90 TRRGRPSVHAAFGAPIAVLAGDALIVLAFQTLALGCAV-QPGPVIALSGIVAEAVGMPGG 148 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + E D ++KT+ LF+AA + AG +AL G NLG Sbjct: 149 IVAGQAWESE---DEVDLARYQRAKTSALFAAAAMAGAASAGEDPLPWRAL---GDNLGD 202 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A+Q+ DD+ D G+ GK +G D +P+ Sbjct: 203 AYQIADDLCDAAGDAASCGKPVGRDAALHRPS 234 >gi|323335062|gb|EGA76352.1| Bts1p [Saccharomyces cerevisiae Vin13] Length = 335 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/238 (23%), Positives = 113/238 (47%), Gaps = 19/238 (7%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 +I +++ GK R L + ++ D +++ +E +H ++LL DD+ D++ Sbjct: 22 LISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIEDNA 81 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG+ + L++G +++ +++ +A +V + ++E L +L+ T+ EL L Sbjct: 82 PLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEPLYH-NLI--TIFNEELINL 138 Query: 149 SLSKNLDV-----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + LD+ T+E YL+++ +KT LF L + ++ + +L + Sbjct: 139 HRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPF 197 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ----RGTKREKN 251 LGI +Q+ DD L+ + K ED GK + P++ A +G + N Sbjct: 198 INLLGIIYQIRDDYLNLKDFQMXSEKGFAEDITEGKLSFPIVHALNFTKTKGQTEQHN 255 >gi|254451013|ref|ZP_05064450.1| farnesyl diphosphate synthase [Octadecabacter antarcticus 238] gi|198265419|gb|EDY89689.1| farnesyl diphosphate synthase [Octadecabacter antarcticus 238] Length = 301 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 100/231 (43%), Gaps = 18/231 (7%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 IP+ + Y + GGK LR L L A + + +A AIE +H +L+HDD+ Sbjct: 43 IPEAMMYAV-RGGKSLRGFLVLEGARLHGVQERIAAPIAGAIEAMHAYSLIHDDLPCMDD 101 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEALEALSLVACTLAEGEL 145 LRRGK W T+VL GD L + AF M+ + + + ++A E + Sbjct: 102 DDLRRGKPTVHRKWDEATAVLTGDALQALAFELIMLADITPETKVVLAHMLAVDAGERGM 161 Query: 146 --------RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 S + L + E + L KT L A IAG ++ Y Sbjct: 162 VGGQAADIAAESAAAALTLGEIESLQA--KKTGALVEWACAAGPRIAGADE---MPMRQY 216 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 G LG AFQ+ DD+LD G+ +GK +G+D GK T +L R Sbjct: 217 GRALGRAFQIADDILDVTGDAEAVGKAVGKDHAAGKATFVSLLGLDGAKSR 267 >gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group] Length = 219 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 16/181 (8%) Query: 78 TLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF------CMVIETKSQEA 129 +L+HDD+ +DD ALRRG+ + + +G T++L GD L + AF C + Sbjct: 2 SLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADRT 61 Query: 130 LEALSLVACTLAEGELRQLSL----SKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLI 183 L A++ + G + + S+ L V+ +Y+HV KTA L AA +++ Sbjct: 62 LRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHV--HKTARLLEAAAVSGAIV 119 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G ++ + ++ Y +G+ FQ+VDDVLD ++GK G+D K T P +L Sbjct: 120 GGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDVEADKATYPKLLGVD 179 Query: 244 R 244 + Sbjct: 180 K 180 >gi|297562507|ref|YP_003681481.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846955|gb|ADH68975.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 380 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 72/240 (30%), Positives = 106/240 (44%), Gaps = 31/240 (12%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA-----IEFIHTATLLHDDVVDDSALR 91 GGKR+RP+L L A +E + T L+HDDV+D S R Sbjct: 65 FTLGGGKRMRPLLAWWGWLAGGGAPSGETARAARQACAAVELVQTCALVHDDVMDGSPTR 124 Query: 92 RGKVAARLV----------------WGNQTSVLVGDFLLSQAFCMVIE--TKSQEALEAL 133 RG+ + +G +VLVGD L A M+ E E + A Sbjct: 125 RGRPSVHAAHALEHERDGHVGDSRRYGEALAVLVGDLALVWADDMLNEALPGVPEPVRAR 184 Query: 134 SL---VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNS 189 ++ + + G+ + + +EE L V KTA L + + +AG + Sbjct: 185 AVWRDLRTEIMAGQFLDVRAQARRERSEEAALRVDLLKTASYSVERPLHLGAAMAGADPA 244 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI----LAFQRG 245 AL+ YG ++GIAFQL DD+L G+ + GK +GED R GK TL ++ LA +RG Sbjct: 245 AVGALRGYGRDVGIAFQLRDDLLGVYGDSSRTGKPVGEDIREGKCTLLLVIGTRLARERG 304 >gi|119719035|ref|YP_919530.1| polyprenyl synthetase [Thermofilum pendens Hrk 5] gi|119524155|gb|ABL77527.1| Polyprenyl synthetase [Thermofilum pendens Hrk 5] Length = 302 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 115/215 (53%), Gaps = 12/215 (5%) Query: 13 EKVNFL--ILKRICSD--VEMIPDVVK---YLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 +++ +L +L R D E+ P++V+ Y +F GGK LR L+L A M + + + Sbjct: 9 DRIAYLGGLLTRYSGDRVKELFPEIVEEASYALF-GGKMLRGTLSLLVASMFTAQVEKVL 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A A+E +H A+L+HDD+ D S RRG+ + +G + ++ V L+ A +V + Sbjct: 68 PIALAVELMHAASLVHDDIADASPTRRGRPSFWSKYGLEDAITVPHVLMPVAISLVADAG 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + E+++ + A G+L + + +V Y +I+ KTA +F A+ + LIA Sbjct: 128 VEAVKESMNAWRRS-ALGQLWDTRILRGREVP-VGYEKLIEYKTAAVFEASCTL-PLIAI 184 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDY-RGEVN 219 + + ++ + YG G+ +Q++DD D RG V+ Sbjct: 185 GRRDIVESGRVYGRFFGLLYQVLDDFSDAERGVVD 219 >gi|227485061|ref|ZP_03915377.1| possible geranyltranstransferase [Anaerococcus lactolyticus ATCC 51172] gi|227236894|gb|EEI86909.1| possible geranyltranstransferase [Anaerococcus lactolyticus ATCC 51172] Length = 276 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 26/197 (13%) Query: 41 GGKRLRPMLTLATALM-------LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 GGKR+R L L T M L+Y+ LA +IEFIH +L+HDD+ R Sbjct: 42 GGKRIRAFLYLETKKMFSQNISELDYK------LAMSIEFIHAYSLVHDDLPAMDDDDYR 95 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLV-----ACTLAEGE 144 RG+ + +G +L GD LL++A ++ I K L+A S + + EG+ Sbjct: 96 RGQESVHKKFGEDIGILTGDALLNEAALILFDIGIKDSSYLKASSYILERASRFGMIEGQ 155 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + L D++ L V K KT+ LF AA ++L + + ++ + NLG+A Sbjct: 156 VMDLRRESTYDLSY--LLEVYKKKTSDLFKAACLAAALTSNQTEYTYRKIEVFAENLGLA 213 Query: 205 FQLVDDVLD--YRGEVN 219 FQ+ DD+L+ Y+ E+N Sbjct: 214 FQIQDDLLEDTYKDELN 230 >gi|303233112|ref|ZP_07319785.1| polyprenyl synthetase [Atopobium vaginae PB189-T1-4] gi|302480697|gb|EFL43784.1| polyprenyl synthetase [Atopobium vaginae PB189-T1-4] Length = 379 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 28/228 (12%) Query: 42 GKRLRPMLTLATA------------LMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 GK +RP L + A + E D V LACA+E A L+HDD+ D+S Sbjct: 76 GKFIRPALCMLGAHIAAGERAAGEAVQTEVLPDALVRLACALELFQAAALIHDDIADESL 135 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL----------EALSLVACT 139 +RRG G ++ +GD L A +I T S E L E L++ T Sbjct: 136 VRRGNPCLYRTHGTGLAINMGDCALVDA-SKLICTLSAEGLPSNAALQLLDEFLTMERTT 194 Query: 140 LAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKS 196 + EG+ L S ++ ++ DYL + + KTA ++ L + +L A ++ AL+ Sbjct: 195 I-EGQALDLGWSRARTWNLAPSDYLVMAELKTAHYSLASPLVLGALFAQAPKALCDALRE 253 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G G+AFQL DD L+ G GK++ D GK T + A + Sbjct: 254 FGCAAGVAFQLRDDYLNLFGN-KAQGKDMCSDIIEGKRTYLTLYALEH 300 >gi|331696598|ref|YP_004332837.1| Geranyltranstransferase [Pseudonocardia dioxanivorans CB1190] gi|326951287|gb|AEA24984.1| Geranyltranstransferase [Pseudonocardia dioxanivorans CB1190] Length = 403 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 106/244 (43%), Gaps = 31/244 (12%) Query: 33 VVKYLIFSGGKRLRPMLTL---ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 V++ + GGKR+RP A + A+E + L+HDD++DDSA Sbjct: 84 VLERFVVGGGKRIRPTFAWWGWRGAGGDPAAAGAALRAVSALELLQACALVHDDLIDDSA 143 Query: 90 LRRGKVAARL---------VW-------GNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 RRG+ + W G ++L+GD L+ A + +S A Sbjct: 144 TRRGRPTVHVEFAGRHRDGGWSGPADRFGAAAAILLGDIALAWADDTL---QSSGLDAAA 200 Query: 134 SLVACTLAEGELRQLSLSKNLDV--------TEEDYLHVIKSKTAV-LFSAALEVSSLIA 184 A ++ + LDV + + V + KTA L + + +A Sbjct: 201 LARAGAPWRAMRTEVLCGQYLDVLAQATADTSTAAAMRVNRFKTAAYTVERPLHIGAALA 260 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G + + A + +G ++GIAFQL DD+L G+ + GK G+D R GK TL V LA +R Sbjct: 261 GADDRLVAAYRGFGTDIGIAFQLRDDMLGVFGDPDVTGKPAGDDLREGKRTLLVALALER 320 Query: 245 GTKR 248 +R Sbjct: 321 AAER 324 >gi|29420495|dbj|BAC66492.1| farnesyl diphosphate synthase [Streptomyces argenteolus] Length = 346 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 3/206 (1%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGK +RP L L A + D + A A+E H +LLHDDV+D RR + A Sbjct: 60 GGGKAIRPALVLLAAEAVGGAADAALPAAVAVELAHNFSLLHDDVMDGDRTRRHRPTAWT 119 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LAEGELRQLSLSKNLDV 156 V+G ++L GD LL+ AF ++ A EA + L EG+ ++ + DV Sbjct: 120 VFGVSPAILAGDALLALAFDVLATAGHPAAPEATRIFGAAIQELLEGQNADMAFERRQDV 179 Query: 157 TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + L + KT L A + +L+ G + L+++G +LG+AFQLVDD+L G Sbjct: 180 ELAECLVMAAGKTGALLGCACALGALLGGGAPEQVEHLRAFGRDLGLAFQLVDDLLGIWG 239 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAF 242 + GK + D R+ K +LP++ A Sbjct: 240 DPQVTGKPVYSDLRSRKKSLPIVAAL 265 >gi|296110654|ref|YP_003621035.1| geranyltranstransferase [Leuconostoc kimchii IMSNU 11154] gi|295832185|gb|ADG40066.1| geranyltranstransferase [Leuconostoc kimchii IMSNU 11154] Length = 306 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 38/219 (17%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDNHVLLACAIEFIHTAT 78 L R +D E D++KY + +GGKRLRPML+LA A + + + A A+E++H+ + Sbjct: 23 LTRATNDSE-FSDMMKYAVLNGGKRLRPMLSLAAMACFGQKITPSFLKAATAVEWVHSYS 81 Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM-------VIETKSQEA 129 L+HDD+ +D+ +RRGK + +G ++LVGD LL+ AF + V+E + A Sbjct: 82 LVHDDLPAMDNDLVRRGKPSVHAQFGEAEAILVGDALLTGAFHVLATANDSVVEDEMISA 141 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF---------SAALEVS 180 +E L L ++ SL + + Y H +SK + + AL Sbjct: 142 VELLKLSQIL----SVQSGSLGMVIGQVHDMYNHGKQSKIDETWLIDEVYMPKTGALLGF 197 Query: 181 SLIAGVQNSVRQ--------------ALKSYGMNLGIAF 205 S +AG + S +Q A+ ++G + GIAF Sbjct: 198 SALAGTRLSNQQDIDQIGQDRFDTNLAMLTFGYDFGIAF 236 >gi|269219432|ref|ZP_06163286.1| polyprenyl synthetase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211128|gb|EEZ77468.1| polyprenyl synthetase [Actinomyces sp. oral taxon 848 str. F0332] Length = 363 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 47/244 (19%) Query: 38 IFSGGKRLRPMLTLAT-ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 + SGGKR R L A A + + A E T+ L+HDD++D ++ RR + + Sbjct: 48 LLSGGKRTRAALLAAGYACATAEDREPAISAGAAAELYQTSALIHDDILDAASTRRSQPS 107 Query: 97 A----------------RLVWGNQTSVLVGDFLLS---QAF---CMVIETK-SQEALEAL 133 A R +G +++L+GDFLLS +AF C + + S+ AL A Sbjct: 108 AHVALARLHLSGGWSGDRAHFGTSSAILLGDFLLSLSTEAFADACAQVGPRASRAALRAF 167 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDY----------LHVIKSKTA---VLFSAALEVS 180 + + +A G+ LD+ E+ L V+ K+A V+F L + Sbjct: 168 ARMTTEVAFGQY--------LDIRAENAPPAADSVGAALSVVAHKSARYSVVFP--LRIG 217 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+AG V L+ G LG AFQL DD L G+ GK + D GK T+ + L Sbjct: 218 ALLAGASGDVLDLLERVGAPLGEAFQLRDDDLGVFGDEEATGKPVCGDIAQGKRTVLLAL 277 Query: 241 AFQR 244 +R Sbjct: 278 MLER 281 >gi|119094157|gb|ABL60987.1| geranylgeranyl pyrophosphate synthetase CrtE [uncultured marine bacterium HF10_19P19] Length = 338 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 115/240 (47%), Gaps = 11/240 (4%) Query: 9 LKDMEKV-NFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 L D+ V + I++R+ S + ++ GK+LR + LA + Sbjct: 21 LPDLSAVLSAFIVRRLPSGKHPLATAAQHHFKRTGKQLRGRMALAAGDSFGVPRTASLPW 80 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--- 124 A A+E +H A+L+HDD+ D +RRG + +G T++ +GD+L++ +F + E Sbjct: 81 AAAVEVLHNASLVHDDICDGDMVRRGAPSVWAFYGRDTALALGDWLIALSFELAAEAAYL 140 Query: 125 -KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 ++ + + LS G+ + + D + Y+ + KTA LF A++E + + Sbjct: 141 GQTPQLVSILSRHMAATTAGQALEFEVRAYPDWS--GYMDISTGKTAPLFIASVEGIAHL 198 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG ++++R L + G +Q+ +D+L+ G+ + ++ D P VI+ FQ Sbjct: 199 AGRRDAIRP-LNRFFSAAGGCYQIANDMLNVIGK--DGAESPASDLLRRAPNA-VIVMFQ 254 >gi|292659826|pdb|3M0G|A Chain A, Crystal Structure Of Putative Farnesyl Diphosphate Synthase From Rhodobacter Capsulatus gi|292659827|pdb|3M0G|B Chain B, Crystal Structure Of Putative Farnesyl Diphosphate Synthase From Rhodobacter Capsulatus Length = 297 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 14/222 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGKRLR L + +A + A A+E +H +L+HDD LRRG Sbjct: 40 GGKRLRAFLAIESAAIHGISXAQAXPAALAVEALHAYSLVHDDXPCXDNDDLRRGLPTVH 99 Query: 99 LVWGNQTSVLVGDFLLSQAF--CM--VIETKSQEALEALSLVACTLAEGELRQLSL---- 150 W + T+VL GD L + AF C V+ + +L + AEG + +L Sbjct: 100 KKWDDATAVLAGDALQTLAFELCTDPVLGSAENRVALVAALAQASGAEGXVYGQALDIAA 159 Query: 151 -SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + +T ++ + + KT L S A + +++AG R L +Y LG+AFQ+ D Sbjct: 160 ETAAVPLTLDEIIRLQAGKTGALISFAAQAGAILAGAD---RGPLTAYATALGLAFQIAD 216 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 D+LD G GK +G+D K T +L R + Sbjct: 217 DILDVEGNEEAAGKRLGKDAEAHKATFVSLLGLAGAKSRAAD 258 >gi|29468176|gb|AAO85432.1|AF479566_1 geranylgeranyl diphosphate synthase [Emericella nidulans] Length = 396 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 19/224 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E+I Y++ GK LR + A + L+ ++ ++ + +HTA+LL DDV D+ Sbjct: 81 EVIMGPYDYMLQHPGKDLRRQMINAFNVWLKVPSESLAIITKVVAMLHTASLLIDDVEDN 140 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G ++ +++ A V + KS A++ L G+ Sbjct: 141 SLLRRGIPVAHSIYGTAQTINSANYVYFLALQEVQKLKSPAAIDMYVQELLNLHRGQGMD 200 Query: 148 LSLSKNLDVTEED-YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN------ 200 L L ED YL ++ +KT LF A++ + QA S G + Sbjct: 201 LFWRDTLTCPSEDEYLEMVGNKTGGLFRLAVK-----------LMQAESSTGKDCVALVN 249 Query: 201 -LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+ FQ+ DD L+ K + ED GK + P+I + + Sbjct: 250 VLGLVFQICDDYLNLSDTTYTQNKGLCEDLTEGKFSFPIIHSIR 293 >gi|83594313|ref|YP_428065.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170] gi|25989734|gb|AAN75038.1| CrtE [Rhodospirillum rubrum] gi|83577227|gb|ABC23778.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170] Length = 289 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 24/261 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDN----HVLLACAIEFIHTATLLHDDV--VD 86 +++ +F GG RLRP LTLA A G++ A AIE +H A+L+HDD+ D Sbjct: 30 AMRHAVFPGGGRLRPRLTLAVAAAC---GNDLPAAADAAAAAIELLHCASLVHDDLPCFD 86 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 D+ RRG+ + + +G +VL GD L+ AF + + E L L+ +A+ Sbjct: 87 DAHSRRGQASVHVAYGEPLAVLAGDALIVMAF-QGLASGLAMVPERLPLLLGIVADAVGM 145 Query: 147 QLSLSKNLDVTEEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + E + + ++KT LF+A+ + AG + + L G LG Sbjct: 146 PAGICAGQAWESEPTVKLAEYQRAKTGALFAASTMAGAAAAGREARSWRML---GECLGE 202 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 A+Q+ DD+ D + E+GK +G D G+P L +R +S + D S Sbjct: 203 AYQVADDLRDVAADPAELGKPVGRDAALGRPNAVGHLGIVGAVRR----LESLVADAVAS 258 Query: 264 VENLKKAFIIMRENRALVDTE 284 V + A + RAL+ E Sbjct: 259 VPDCAGAGAL----RALIHKE 275 >gi|94502447|ref|ZP_01308879.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|94450996|gb|EAT13989.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] Length = 137 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 57/99 (57%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S + +I ++ Y GK +RP+ ML LA IE IHTA+L+HDDV Sbjct: 34 SKIPLIQEINNYFFNIKGKYIRPIFVFLITKMLGNISKKTYDLAILIELIHTASLIHDDV 93 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +D S RRG ++ +W N+T+++ GD++ S++F + I+ Sbjct: 94 IDFSNTRRGFLSINAIWQNKTALVFGDYIFSKSFDIAIK 132 >gi|67516745|ref|XP_658258.1| hypothetical protein AN0654.2 [Aspergillus nidulans FGSC A4] gi|40746274|gb|EAA65430.1| hypothetical protein AN0654.2 [Aspergillus nidulans FGSC A4] gi|259489078|tpe|CBF89051.1| TPA: Geranylgeranyl diphosphate synthase [Source:UniProtKB/TrEMBL;Acc:Q874I1] [Aspergillus nidulans FGSC A4] Length = 396 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 19/224 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E+I Y++ GK LR + A + L+ ++ ++ + +HTA+LL DDV D+ Sbjct: 81 EVIMGPYDYMLQHPGKDLRRQMINAFNVWLKVPSESLAIITKVVAMLHTASLLIDDVEDN 140 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G ++ +++ A V + KS A++ L G+ Sbjct: 141 SLLRRGIPVAHSIYGTAQTINSANYVYFLALQEVQKLKSPAAIDIYVQELLNLHRGQGMD 200 Query: 148 LSLSKNLDVTEED-YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN------ 200 L L ED YL ++ +KT LF A++ + QA S G + Sbjct: 201 LFWRDTLTCPSEDEYLEMVGNKTGGLFRLAVK-----------LMQAESSTGKDCVALVN 249 Query: 201 -LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+ FQ+ DD L+ K + ED GK + P+I + + Sbjct: 250 VLGLVFQICDDYLNLSDTTYTQNKGLCEDLTEGKFSFPIIHSIR 293 >gi|300173625|ref|YP_003772791.1| geranyltranstransferase [Leuconostoc gasicomitatum LMG 18811] gi|299888004|emb|CBL91972.1| geranyltranstransferase [Leuconostoc gasicomitatum LMG 18811] Length = 309 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 32/208 (15%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDS 88 +++ Y + +GGKRLRPMLTLA + +L +A A+E++H +L+HDD+ +D+ Sbjct: 34 EMMSYAVLNGGKRLRPMLTLAVVASFGQKITPSILKVATAVEWVHAYSLVHDDLPAMDND 93 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------ALEALSLVACTLAE 142 RRGK + +G ++LVGD LL+ AF +V S + A + L L++ L+ Sbjct: 94 LFRRGKPSVHARYGEAEAILVGDALLTGAFHVVSSANSTDTENENIAAKELLLLSQMLSY 153 Query: 143 ---------GELRQLSLSKNLDVTEEDYL--HVIKSKTAVLFSAALEVSSLIAGVQ-NSV 190 G++ + + + ++L V KTA L + S ++ V NSV Sbjct: 154 HAGAFGMVIGQVEDMKNHRQEAKIDVNWLLNDVYAPKTAALLGFSAIAGSRLSHVNSNSV 213 Query: 191 -----------RQALKSYGMNLGIAFQL 207 AL ++G + G+AFQ+ Sbjct: 214 ADNSEIAISTTNSALLTFGTDFGMAFQI 241 >gi|331251210|ref|XP_003338205.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309317195|gb|EFP93786.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 503 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 20/232 (8%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C V+++ + YL + GK +R M+ A L + ++ + +HTA+LL DD Sbjct: 195 CVSVKILLEPFTYLTSTPGKEIRSMMIDAFNHWLSVPTEQLNIVKRIVGLLHTASLLMDD 254 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGD---FLLSQAFCMVIETKSQEALEALSLVACTL 140 V D S LRRG A ++G ++ + FL Q M+ ++ A L+ Sbjct: 255 VEDGSELRRGIPVAHKIYGIPQTINSANYVYFLAYQELSMLHPSQDSSASNLWKLI---- 310 Query: 141 AEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 EL +L + +D+ TEE+Y+ ++K+KT LF A+++ ++ +Q + Sbjct: 311 -NEELLRLHRGQGMDLYWRDSLTCPTEEEYIQMVKNKTGGLFRIAIKLMMAMSPLQQ-IP 368 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + +GI FQ+ DD+L+ + + K ED GK + P++ A + Sbjct: 369 DYVPLVDL-IGIIFQIRDDLLNLSSDYT-VNKGFCEDLTEGKFSFPIVHAIR 418 >gi|217069938|gb|ACJ83329.1| unknown [Medicago truncatula] Length = 214 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 2/89 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + +GGKR+RP+L LA ++ + ACA+E IHT +L+HDD+ +D+ Sbjct: 110 EAMRYSLLAGGKRVRPVLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDD 169 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 LRRGK V+G +VL GD LL+ AF Sbjct: 170 LRRGKPTNHKVFGEDVAVLAGDALLAFAF 198 >gi|307719391|ref|YP_003874923.1| polyprenyl synthetase [Spirochaeta thermophila DSM 6192] gi|306533116|gb|ADN02650.1| putative polyprenyl synthetase [Spirochaeta thermophila DSM 6192] Length = 376 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 91/196 (46%), Gaps = 30/196 (15%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVA----------------ARLVWGNQTSVLVG 110 + A+E + L+HDDV+D +RRG + AR V G +V VG Sbjct: 99 VGAALELFQSGLLVHDDVMDRDRVRRGGPSMFAQYEGRAGEEGVREARRV-GEALAVCVG 157 Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE---------EDY 161 D F ++ EA+ +L+ C +AE E ++ +++ DV ED Sbjct: 158 DVAFFLGFGLLAGVGRGEAMRD-ALLRC-VAE-EYARVGVAQMDDVWYGAAGEGVRLEDV 214 Query: 162 LHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 L V + KT FS L + +L+AG VR AL+ G LG+ FQ+ DD L G E Sbjct: 215 LRVYRYKTGRYTFSVPLSLGALLAGADEGVRGALEEVGELLGVVFQIRDDELGLFGSEEE 274 Query: 221 MGKNIGEDFRNGKPTL 236 +GK G D R GK T+ Sbjct: 275 IGKPAGSDVREGKRTV 290 >gi|54024172|ref|YP_118414.1| polyprenyl synthase [Nocardia farcinica IFM 10152] gi|54015680|dbj|BAD57050.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152] Length = 385 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 18/230 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL----LACAIEFIHTATLLHDDVVDD 87 D+ ++++ + GKR+R L LA A ++ V +AC E H ++L+HDD+ D Sbjct: 91 DIYRHILTAPGKRVRAGLALACAQLIPSPDAAPVHDALDIACVWEMFHESSLVHDDICDG 150 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLVACTLAEGEL 145 S LRR + +G + + G L +A ++ + + A + A L Sbjct: 151 SPLRRDAPSVPAAFGVRRAARAGFHLAGKALQVLARVIADNPAAFGTVGTAAGVTYLDRL 210 Query: 146 RQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 LSL + ++ Y V +KT LF A +++ + L Sbjct: 211 SDLSLGQLVETIPPTVDHRALRGHYARVAAAKTGTLFRLACAYGGTAGALEHDRLRDLMD 270 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQR 244 Y L AFQ++DDV D G +GK+ D PT PVI LA QR Sbjct: 271 YAERLAFAFQVMDDVRDVDGGPG-LGKDACGDLDRRVPTWPVIEWLAEQR 319 >gi|261198611|ref|XP_002625707.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis SLH14081] gi|239594859|gb|EEQ77440.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis SLH14081] Length = 405 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 75/296 (25%), Positives = 123/296 (41%), Gaps = 41/296 (13%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK +R A L D+ ++ + +HTA+LL DDV D S LRRG Sbjct: 101 YMVQQPGKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDVEDSSNLRRGVP 160 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + KS + + L G+ + L Sbjct: 161 VAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHRGQGMDVFWRDTLT 220 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-------LGIAFQL 207 TEEDYL ++ +KT LF A++ + QA G++ +G+ FQ+ Sbjct: 221 CPTEEDYLEMVGNKTGGLFRLAIK-----------LMQAESDSGIDCVALVNLMGLIFQI 269 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF--------------QRGTKRE---- 249 DD L+ K ED GK + P+I + Q+ T E Sbjct: 270 CDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIRSQPDNLQLINILKQKTTDEEVKRY 329 Query: 250 -KNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 N+ +ST + K VE KA +++ E L D A G+++ D +R + Sbjct: 330 AVNYMESTGSFAYTRKTVVELRDKALLLIDELEKLTDMTQGASQKGERSGDMVRSI 385 >gi|50842220|ref|YP_055447.1| geranylgeranyl pyrophosphate synthase [Propionibacterium acnes KPA171202] gi|282854286|ref|ZP_06263623.1| polyprenyl synthetase [Propionibacterium acnes J139] gi|50839822|gb|AAT82489.1| geranylgeranyl pyrophosphate synthase [Propionibacterium acnes KPA171202] gi|282583739|gb|EFB89119.1| polyprenyl synthetase [Propionibacterium acnes J139] gi|314923275|gb|EFS87106.1| polyprenyl synthetase [Propionibacterium acnes HL001PA1] gi|314966417|gb|EFT10516.1| polyprenyl synthetase [Propionibacterium acnes HL082PA2] gi|314980998|gb|EFT25092.1| polyprenyl synthetase [Propionibacterium acnes HL110PA3] gi|315091657|gb|EFT63633.1| polyprenyl synthetase [Propionibacterium acnes HL110PA4] gi|315093037|gb|EFT65013.1| polyprenyl synthetase [Propionibacterium acnes HL060PA1] gi|315103189|gb|EFT75165.1| polyprenyl synthetase [Propionibacterium acnes HL050PA2] gi|315107050|gb|EFT79026.1| polyprenyl synthetase [Propionibacterium acnes HL030PA1] gi|327327861|gb|EGE69637.1| putative polyprenyl synthetase [Propionibacterium acnes HL103PA1] Length = 365 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 115/256 (44%), Gaps = 44/256 (17%) Query: 40 SGGKRLRPMLTL-ATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRG--- 93 +GGKRLRP A + + LL A ++EF+H + L+HDD++D S RRG Sbjct: 52 AGGKRLRPAFCYWGHAAAADQPTEPAGLLQAAASLEFLHVSALVHDDLMDHSDTRRGLPS 111 Query: 94 -----KVAARLVWGNQTS--------VLVGDFLL---SQAFCMVIETKSQEALEALSLVA 137 + A + G+ + +L+GD LL SQ F + ++A L A Sbjct: 112 VHRHFEAAHGIAHGDGPAEQFGFDIAILLGDLLLMWSSQMF-------TSAPVKADRLAA 164 Query: 138 CTLAEGELR-QLSLSKNLDVTEEDYLHVIKSKTA-------VLFSAA-------LEVSSL 182 T +R +++ + LDVT + + S++A V + A ++ Sbjct: 165 ATPLLDAMRTEVTCGQVLDVTSQSGMAGSDSESALDLVGRVVEYKCASYTVVRPCQIGVA 224 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AG + ++Q + +G +G AFQ DD+L G+ GK G+D R GK T+ V A Sbjct: 225 LAGGSDRLQQTMADFGSPIGRAFQYRDDLLGVFGDAELTGKPAGDDLREGKRTVLVAHAL 284 Query: 243 QRGTKREKNFWKSTIN 258 R + KS + Sbjct: 285 NRADSHDAARLKSLLG 300 >gi|62959219|gb|AAY23717.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP1768] Length = 145 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 14/145 (9%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEALEALSLV- 136 HDD+ +D+ LRRG+ V+G+ ++L GD +LS+AF MV + + + A L +V Sbjct: 1 HDDMPSMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRAFEMVAVRSANVPADRLLRVVG 60 Query: 137 -------ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A L G++ L S + +D+ +Y+H+ KTA L A + +LI G + Sbjct: 61 ELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHL--HKTAALLRACVVTGALIGGAND 118 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLD 213 QA+++Y +G+AFQ++DD+LD Sbjct: 119 EQLQAMRTYANGIGLAFQIIDDILD 143 >gi|225709438|gb|ACO10565.1| Geranylgeranyl pyrophosphate synthetase [Caligus rogercresseyi] Length = 303 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 5/207 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL+ + GK +R L A L+ D ++ I+ +H A+LL DD+ D LRRG Sbjct: 24 YLLQAKGKNIRKKLLTAFNSWLKIPSDTLNKISDIIQMLHNASLLLDDIEDSGILRRGIP 83 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 +R ++G +++ ++++ A VIE A + S L G+ ++ N Sbjct: 84 VSRKIFGEPSTINCANYVMFIALEKVIELNHPSAAKVFSEQLLELHRGQGMEIYWRDNYQ 143 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TE++Y + KT LF+ + + L + + + Q ++ LG+ FQ+ DD Sbjct: 144 CPTEKEYRQMCIRKTGGLFALGVRLMQLFSSEEGNYIQLVEL----LGLYFQIRDDFAGL 199 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILA 241 + M K ED GK + P++ A Sbjct: 200 VMDEYHMSKGFAEDLTEGKFSFPLVHA 226 >gi|254513762|ref|ZP_05125823.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium NOR5-3] gi|219676005|gb|EED32370.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium NOR5-3] Length = 290 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 14/237 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACAIEFIHTATLLHDDVV--DDSAL 90 +++ +F GG R+RP L LA AL A ++E +H A+L+HDD+ D++ Sbjct: 32 LQHAVFPGGARVRPKLCLAVALANNCDAPALAAAAAASVELLHCASLVHDDMPCFDNAGE 91 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG+ + +G ++L GD L+ AF ++ + A LS V +AEG + Sbjct: 92 RRGRESVHSAFGEPIALLAGDALIVSAFALLARPQ-LPAKNRLSQVLRVVAEGVGAPCGI 150 Query: 151 SKNLDVTEEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 + E + V +SKT LF AA + AGV ++ G +G A+Q+ Sbjct: 151 AAGQAWESEPVVDVSLYHRSKTGALFIAATAAGAAAAGVDVG---PWRTLGAKIGEAYQV 207 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 DD+ D + ++GK G D +P+ L T+R + + +G ++V Sbjct: 208 ADDIQDATSTLEQLGKPCGVDAALQRPSAVSELGLDGATRRLREL----VEEGVVAV 260 >gi|327262083|ref|XP_003215855.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Anolis carolinensis] Length = 300 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 7/223 (3%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 ++ C V + P YL+ GK++R L+ A L D ++ E +H A+L Sbjct: 4 VEETCKRVLLEP--YHYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASL 61 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 L DD+ D+S LRRG A ++G + + +F+ V+ +A++ +L Sbjct: 62 LIDDIEDNSKLRRGFPVAHSIYGIPSVINCANFIYFLGLQKVLTLDHPDAVKVFTLQLLE 121 Query: 140 LAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L +G+ + N TE +Y ++ KT LF A+ + L + + ++ L + Sbjct: 122 LHKGQGLDIYWRDNYTCPTESEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNT-- 179 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 LG+ FQ+ DD + + K+ ED GK + P I A Sbjct: 180 --LGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|254467778|ref|ZP_05081184.1| polyprenyl synthetase superfamily protein [beta proteobacterium KB13] gi|207086588|gb|EDZ63871.1| polyprenyl synthetase superfamily protein [beta proteobacterium KB13] Length = 303 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 5/189 (2%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 S GK +R L LA+ +L D + + A E IHTA+L+HDD+ D RRG Sbjct: 50 SKGKFIRAQLALASGELLNLPKDTVIKWSVACELIHTASLIHDDICDQDEKRRGLTTIWK 109 Query: 100 VWGNQTSVLVGDFLLSQAFCMV--IETKSQEA--LEALSLVACTLAEGELRQLSLSKNLD 155 +G ++ +GDF+++QAF + IET + L +LSL + G++ + + Sbjct: 110 KYGVPAAICLGDFIIAQAFQKLSEIETGWHQTILLNSLSLSMKKIIVGQVSDVGVDIK-K 168 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 ++ +DY + KT L L+ + S L ++G+A+Q+++D + + Sbjct: 169 ISMKDYEQIAYEKTGPLLMTPLDGMFRCKELPESELNGLNKLMNSIGLAYQMINDYKNIK 228 Query: 216 GEVNEMGKN 224 + ++ N Sbjct: 229 SKKTDISLN 237 >gi|134098296|ref|YP_001103957.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] gi|133910919|emb|CAM01032.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] Length = 358 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 28/241 (11%) Query: 30 IPDVVKYLIFSGGKRLRPMLTL-----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 + ++V++ + GGKR+RP A + + A ++E + L+HDD+ Sbjct: 35 VDELVRF-VLGGGKRIRPTFAWWGWRAAGGAADGPQAQAMLRAASSLELLQACALVHDDL 93 Query: 85 VDDSALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQAFCMVIETK-SQ 127 +DDS RRG W G ++L+GD L+ A M+ + Sbjct: 94 IDDSDTRRGNPTVHQAFAALHRHQRWNGEDRQFGMAAAILLGDLALAWADDMLHASGLPP 153 Query: 128 EA----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSL 182 EA L + + G+ L D T + L + + K+A LE+ + Sbjct: 154 EAMARGLRPWRAMRTEVLAGQYLDLLGPVRGDETPQAALRIDELKSASYTVQRPLELGAE 213 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AG + +AL+ +G ++G+AFQL DD+L G+ GK G+D R GK TL + A Sbjct: 214 LAGADETALEALRRFGSDIGVAFQLRDDLLGVFGDPEVTGKPAGDDLREGKRTLLIAEAL 273 Query: 243 Q 243 + Sbjct: 274 E 274 >gi|77464716|ref|YP_354220.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1] gi|77389134|gb|ABA80319.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1] Length = 289 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 17/241 (7%) Query: 25 SDVEMIPDV--VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 +D E +P V ++Y + GGKRLR L L +A + + V A +IE +H +L+HD Sbjct: 23 ADREDLPVVHAMRYAV-QGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHD 81 Query: 83 DVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 D+ LRRG W T+VL GD L + AF ++ + A + LVA Sbjct: 82 DMPCMDDDDLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALGPAAVRIELVASLA 141 Query: 141 AEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + L + LD+ E H+ KT L + E +++ + R Sbjct: 142 KASGAEGMVLGQALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAILG---QADR 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L+ Y LG+AFQ+ DD+LD G+ + GK + +D GK T +L R + Sbjct: 199 VPLRRYATALGLAFQIADDILDVEGDAEKAGKRLQKDAEAGKATFVSLLGLDGAKARARA 258 Query: 252 F 252 Sbjct: 259 L 259 >gi|291004284|ref|ZP_06562257.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] Length = 370 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 28/241 (11%) Query: 30 IPDVVKYLIFSGGKRLRPMLTL-----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 + ++V++ + GGKR+RP A + + A ++E + L+HDD+ Sbjct: 47 VDELVRF-VLGGGKRIRPTFAWWGWRAAGGAADGPQAQAMLRAASSLELLQACALVHDDL 105 Query: 85 VDDSALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQAFCMVIETK-SQ 127 +DDS RRG W G ++L+GD L+ A M+ + Sbjct: 106 IDDSDTRRGNPTVHQAFAALHRHQRWNGEDRQFGMAAAILLGDLALAWADDMLHASGLPP 165 Query: 128 EA----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSL 182 EA L + + G+ L D T + L + + K+A LE+ + Sbjct: 166 EAMARGLRPWRAMRTEVLAGQYLDLLGPVRGDETPQAALRIDELKSASYTVQRPLELGAE 225 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +AG + +AL+ +G ++G+AFQL DD+L G+ GK G+D R GK TL + A Sbjct: 226 LAGADETALEALRRFGSDIGVAFQLRDDLLGVFGDPEVTGKPAGDDLREGKRTLLIAEAL 285 Query: 243 Q 243 + Sbjct: 286 E 286 >gi|309792674|ref|ZP_07687127.1| polyprenyl synthetase [Oscillochloris trichoides DG6] gi|308225302|gb|EFO79077.1| polyprenyl synthetase [Oscillochloris trichoides DG6] Length = 304 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 8/236 (3%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D++ V+ ++ +R S +I ++ R R L L A + EY+ + + A A Sbjct: 13 DLQAVDRIVRERTASRSGVIGVAEPTILRPDAMRPRAALVLLAAHLGEYQLERTIHAAAA 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E I+ AT H+D++D + RRG+ A + WG+ S++VGD+L + A + + + Sbjct: 73 VELIYAATRTHNDLIDAAERRRGQ-ARQGDWGHGLSLMVGDYLFALAAGEMALSPDPRVI 131 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYL-HVIKSKTAVLFSAALEVSSLIAGVQNS 189 + S + E EL + + L+V + Y H S A+ +A ++ + Sbjct: 132 SSYSQAVMRICESELAPIPGLRPLEVAQAAYFAHTGSSAAALYAAACQAGAACGGLAGDQ 191 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 V AL YG LG+A ++ ++ D+ G R G +LP+ILA Q G Sbjct: 192 V-AALAQYGHELGVALRISTEIHDF-----TTPTEAGASLRRGVVSLPLILAAQHG 241 >gi|255520793|ref|ZP_05388030.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL J1-175] Length = 157 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 2/90 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 K V+G+ T++L GD LL+ AF ++ E Sbjct: 98 KYTNHKVFGDATAILAGDALLTLAFSILAE 127 >gi|212545524|ref|XP_002152916.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium marneffei ATCC 18224] gi|210065885|gb|EEA19979.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium marneffei ATCC 18224] Length = 957 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 11/216 (5%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ YL GK +R L + L+ + ++ + +HTA+LL DD+ D Sbjct: 667 EILLGPFNYLESLPGKNMRSQLIQSFNTWLKVPERSLTVIIKVVSMLHTASLLIDDIQDQ 726 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---GE 144 S LRRG+ A ++G ++ G+++ F + E + + +A+S+ +L + G+ Sbjct: 727 SILRRGQPVAHSIFGTAQAMNSGNYVY---FLALREVQKLQNPKAISIYVGSLVDLHRGQ 783 Query: 145 LRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 +L +L TEE YL ++ +KT LF A+++ A VQ ++ LGI Sbjct: 784 GMELFWRDSLMCPTEEQYLDMVANKTGGLFCLAVQLMQAEATVQADFIPLVRL----LGI 839 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 FQ+ DD L+ + K + ED GK + P+I Sbjct: 840 IFQICDDYLNLKSTAYADNKGLCEDLTEGKFSFPII 875 >gi|167517607|ref|XP_001743144.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778243|gb|EDQ91858.1| predicted protein [Monosiga brevicollis MX1] Length = 315 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 23/252 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 +++ + +Y+ GK +R L A L+ D ++ + +H A+LL DD+ D+ Sbjct: 21 QVLEEPYRYVTQKPGKDIRSKLINAFNAWLKVPDDKLAIIKEVTKILHNASLLIDDIEDN 80 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G ++ +++ V++ +S A +A + +L + Sbjct: 81 SKLRRGLPVAHAIFGIPQTINCANYMYFICMAKVMDLQSPAAAQAFT--------DQLIE 132 Query: 148 LSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L + LD+ TEE+Y ++ KT LF+ AL + L + + LK++ Sbjct: 133 LHRGQGLDIFWRDTVQCPTEEEYKRMVLQKTGGLFALALRLMQLFSDDKRDFGPLLKTFS 192 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKST 256 + FQ+ DD + + + K+ ED GK + P+I ++ + N K Sbjct: 193 L----YFQIRDDYANLQSDEYAANKSFCEDITEGKFSFPIIHCIRQSPTEHQLLNILKQR 248 Query: 257 INDGKISVENLK 268 +D + + L+ Sbjct: 249 TDDRDLKLHCLR 260 >gi|302864751|ref|YP_003833388.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] gi|302567610|gb|ADL43812.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] Length = 384 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 82/280 (29%), Positives = 115/280 (41%), Gaps = 65/280 (23%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 +E LT D F R C + +GGKR+RP T A G Sbjct: 52 VESLTEIDAAMGGFATTARDC-------------VLAGGKRVRP--TFAYWGWRGVVGGE 96 Query: 64 HVLLA-----CAIEFIHTATLLHDDVVDDSALRRGKVAARLV----------------WG 102 L + A+E +HT L+HDDV+D S RRG A +G Sbjct: 97 EPLCSVLPALSALELLHTFALVHDDVMDASDTRRGLPTAHRAAAARHRAAGHTGDPDRYG 156 Query: 103 NQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACTLAEGELRQLSLSKN-LDVTEE 159 +VL+GD CMV + + A+ A L+ ++R +++ LDV E Sbjct: 157 EAVAVLIGDL------CMVWADRLMAHAAVPAERLLDVRRCYDQMRVETVAGQFLDVLGE 210 Query: 160 D---------YLHVIKSKTA-------VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + L V + KTA +LF A L A + + A YG+ +G Sbjct: 211 NDSASWTVDRALRVARYKTASYTVQRPLLFGACLAG----ADADDPLIAAYTRYGLAVGE 266 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AFQL DD+L G+ GK G+D R GKPT ++LA Q Sbjct: 267 AFQLRDDLLGVYGDPETTGKPAGDDLRTGKPTALLMLARQ 306 >gi|296166038|ref|ZP_06848487.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898603|gb|EFG78160.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 349 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 110/241 (45%), Gaps = 30/241 (12%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACAIEFI-HTATLL 80 I SD E + ++ + +GGKRLRP + D+ VLL + + H L+ Sbjct: 23 IGSDYEDLVAALEDFVLNGGKRLRPAFAYWGWRAVATGEPDSEVLLLFSALELLHACALV 82 Query: 81 HDDVVDDSALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQAFCMVIET 124 HDDV+DDSA RRG+ + W G ++L+GD LS A +V Sbjct: 83 HDDVIDDSATRRGRPTTHVRFADLHRARRWRGSPERFGMSAAILLGDLALSWADDIVF-- 140 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE--------DYLHVIKSKTAVL-FSA 175 +++ + A V AE L + LD+ E ++V KTA S Sbjct: 141 RAELSPGAARRVQRVWAEIRTEVLG-GQYLDIVAEASGAESIASAMNVDTYKTACYTVSR 199 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L++ + A + V+ +G ++G+AFQL DDVL G+ GK G+D R+GK T Sbjct: 200 PLQLGAAAAADRPDVQDVFGRFGTDIGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRT 259 Query: 236 L 236 + Sbjct: 260 V 260 >gi|118594190|ref|ZP_01551537.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Methylophilales bacterium HTCC2181] gi|118439968|gb|EAV46595.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Methylophilales bacterium HTCC2181] Length = 322 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 15/207 (7%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 S GK +R L LAT +L + ++ A E IH+A+LLHDDV D RRG++ Sbjct: 49 SEGKWIRAKLALATGSLLGLSSETYIKWAVVCELIHSASLLHDDVCDKDLYRRGRLTVWK 108 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 +G ++ GD+L++++F + E SQ + + L L ++ + +++DV+ + Sbjct: 109 EFGIPAAICTGDYLIAESFKKITEI-SQGWHQTILL---KLLSSSVKDIVFGQSVDVSVD 164 Query: 160 -------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 +Y + KT L + ALK NLG+A+Q V+D+ Sbjct: 165 SVLLDWANYQKIAIKKTGPLIMLPIMGMFKCKEFDGDECIALKEISENLGLAYQWVNDIE 224 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++ G G+ D G P +I Sbjct: 225 NFVGH----GQEPLSDLIYGHPNAIII 247 >gi|38234187|ref|NP_939954.1| putative geranylgeranyl pyrophosphate synthase [Corynebacterium diphtheriae NCTC 13129] gi|38200449|emb|CAE50137.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium diphtheriae] Length = 374 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 29/239 (12%) Query: 33 VVKYLIFSGGKRLRPMLTLAT-----ALMLEYRGDNHVLLAC-AIEFIHTATLLHDDVVD 86 +V+Y + GGKR+RP A L + VL A ++E I L+HDD++D Sbjct: 54 LVEY-VLGGGKRIRPTYAWAGFVASGGLTNKTEDPGAVLTAIGSLELIQACALIHDDIID 112 Query: 87 DSALRRG-----KVAARLV-----------WGNQTSVLVGDFLLSQAFCM-----VIETK 125 S RRG +VA R +G ++LVGD + A M + + Sbjct: 113 ASDTRRGNPTVHRVAERTHAESHRLGDSARFGESIAILVGDLAMVWADDMFHNSGLSDAA 172 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIA 184 + A A + + G+L + + + E V + KTA L + + +A Sbjct: 173 IRRASNAWRGMRTEVIGGQLLDIYIESTGSESIELAETVNRFKTAAYTIERPLHIGAALA 232 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G + L++YG ++G+AFQL DD+L G+ + GK G+D R GK T+ V A + Sbjct: 233 GADDQTVHCLRNYGRDIGLAFQLRDDLLGVFGDPSVTGKPAGDDLREGKRTVLVAKALE 291 >gi|312087949|ref|XP_003145671.1| geranylgeranyl pyrophosphate synthetase [Loa loa] gi|307759165|gb|EFO18399.1| geranylgeranyl pyrophosphate synthetase [Loa loa] Length = 306 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 9/225 (4%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLL 80 + DV + +Y++ GK+LR L A L+ D VL + +E +H A+L+ Sbjct: 1 MADDVTQLLAPYQYILKLPGKQLRSQLAKAFNSWLQV--DVEVLDSIMTVVEMLHNASLM 58 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 DD+ D S LRRG ++G ++ +++ A I EA++ + L Sbjct: 59 IDDIEDSSLLRRGLPVTHSIYGIPRTINTANYVYFAALSRCILLGKFEAVKIFTEQLLEL 118 Query: 141 AEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ ++L + TEE+Y + KT LF+ +++ L Q + ++ Sbjct: 119 HRGQGKELYWRDTVQCPTEEEYEQMAMQKTGGLFALTIQLMELFGKKQYDFKSLIR---- 174 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 NL + FQ+ DD ++ K ED GK + P+I+A + Sbjct: 175 NLAVYFQIRDDYINLCSHAYAEQKTFAEDLTEGKFSFPIIVAIDK 219 >gi|62959173|gb|AAY23694.1| farnesyl diphosphate synthase [Roseobacter denitrificans OCh 114] Length = 145 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 10/143 (6%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-- 136 HDD+ +D+ LRRGK A V+G ++L GD LLS AF V T A L ++ Sbjct: 1 HDDLPAMDNDDLRRGKPANHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLLQVIVR 60 Query: 137 ------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A L G++ L DV+ E + KT L + +++AG + Sbjct: 61 LGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPEE 120 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 Q L Y N+G+AFQ+VDD+LD Sbjct: 121 VQLLSRYAQNIGLAFQIVDDILD 143 >gi|21328588|gb|AAM48595.1| geranylgeranyl pyrophosphate synthetase [uncultured marine proteobacterium] gi|40062988|gb|AAR37858.1| geranylgeranyl pyrophosphate synthetase [uncultured marine bacterium 443] Length = 292 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 18/218 (8%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA----CAIEFIHTATLLHDDV 84 ++ + Y +F GG R+RP + A AL + V LA AIE +H A+L+HDD+ Sbjct: 27 LLAQALNYAVFPGGARVRPKICKAVALA---NNSSDVGLANAAASAIELLHCASLVHDDL 83 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL--EALSLVACTL 140 DD+ RRGK + +G + +VL GD L+ AF + T + A+ E + LV + Sbjct: 84 PCFDDATQRRGKPSVHAKFGERIAVLTGDALIVAAF-QTLATHAIHAVRTERVPLVTAIV 142 Query: 141 AEGELRQLSLSKNLDVTEE---DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 A G + E D ++KT LF AA + AGV + Sbjct: 143 ARGVGAPHGICAGQAWECERSVDLSRYHRAKTGALFVAATCAGAAAAGVDPG---PWVNL 199 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 G ++G A+Q+ DD+ D + +GK G D + +P+ Sbjct: 200 GASIGEAYQVADDIKDAISDPETLGKPTGIDVKLDRPS 237 >gi|89069936|ref|ZP_01157269.1| farnesyl diphosphate synthase [Oceanicola granulosus HTCC2516] gi|89044490|gb|EAR50618.1| farnesyl diphosphate synthase [Oceanicola granulosus HTCC2516] Length = 289 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 94/208 (45%), Gaps = 17/208 (8%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGK LR L L A + + A AIE +H +L+HDD+ +RRG+ Sbjct: 41 GGKGLRAFLVLEGARLCGLAPGAALGAAAAIECVHAYSLVHDDLPAMDDDDIRRGRPTVH 100 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQLSLSKNLDVT 157 W T++LVGD L + AF V+ + E L +A LAE R + + LD+ Sbjct: 101 KAWDEATAILVGDALQALAFEEVLACDAPP--ERLVALARGLAEAAGARGMVAGQMLDIA 158 Query: 158 EE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 E D + KT L + + +AG + YG LG+AFQ+ Sbjct: 159 AESAVAPMTLADVERIQSHKTGALIVWSATAGAHLAGADPA---PFARYGAALGLAFQIA 215 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 DD+LD G+ E+GK + +D GK T Sbjct: 216 DDLLDATGDAAEVGKAVDKDAAAGKATF 243 >gi|255635048|gb|ACU17882.1| unknown [Glycine max] Length = 342 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 27/223 (12%) Query: 27 VEMIPDVVKYLIFS----GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 V+ P + + + +S G KR P++ ++ + ACA+E +H A+L+HD Sbjct: 71 VQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGGSRLAAFPTACALEMVHAASLIHD 130 Query: 83 DV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALE-------- 131 D+ +DDS RRG+ + ++G ++L GD L F ++ +T S E Sbjct: 131 DLPCMDDSPSRRGQPSNHTIYGVDMAILAGDALFPLGFRHIVSQTPSDLVPESHLLRVIA 190 Query: 132 --ALSLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A S+ + +A G+ L N + +E + +AV +AG ++ Sbjct: 191 EIARSVGSTGMAAGQFLDLEGGPNAVGFIQEKKFGEMGESSAV-------CGGFLAGAED 243 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG--KNIGEDF 229 + L+ YG +G+ + +VDD+++ R +V G KN G+ + Sbjct: 244 DEIERLRRYGRAVGVLYAVVDDIIEERLKVEGDGNRKNKGKSY 286 >gi|297571334|ref|YP_003697108.1| polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296931681|gb|ADH92489.1| Polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 350 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 81/276 (29%), Positives = 120/276 (43%), Gaps = 43/276 (15%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 SGGKR R L +A R + L A A+E + L+HDD++DD+ RRG A Sbjct: 46 SGGKRTR-ALCVAGGFEAISRQTQDLPLHAAVAVELYQASALVHDDIIDDAETRRGIPAP 104 Query: 98 R----------------LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----ALSL- 135 ++G + VL+GD+LLS C E Q+A + A +L Sbjct: 105 HRLFAAQHEQLGFIGEAALFGQHSGVLLGDYLLS---CGGEEFAKQDAPDGAFRRAFALF 161 Query: 136 --VACTLAEGELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI----A 184 +A A G+ + LS + D +D V+ K+A ++E+ LI A Sbjct: 162 NEMASETAFGQYMDMRAEFTPLSNDADCAVDDAFLVLLHKSARY---SIELPVLIGVALA 218 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G + L + LG AFQL DD L G+ GK G D GK T+ + L Q Sbjct: 219 GGDDDAAARLTLFTRPLGEAFQLRDDELGIFGDPAVTGKPAGSDISEGKRTVLLALTRQM 278 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280 T+ E+ F + + +S +L + IMR + A Sbjct: 279 CTQAERTFIDQRLGNA-VSDTDLAEIQAIMRSSGAF 313 >gi|325283242|ref|YP_004255783.1| Polyprenyl synthetase [Deinococcus proteolyticus MRP] gi|324315051|gb|ADY26166.1| Polyprenyl synthetase [Deinococcus proteolyticus MRP] Length = 331 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 9/177 (5%) Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALSLVA 137 L+HDD+VDDS RRG A + G ++ GD L + + V + E L+++ Sbjct: 81 LIHDDIVDDSDERRGAPALHKLHGVPLALNAGDALHAYMWAAVQKAGLDAGFSEFLTMIH 140 Query: 138 CTLAEGELRQLSLSKN--LDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQAL 194 T AEG+ +S ++ ++ DYL +++ KT L + +L AG Sbjct: 141 RT-AEGQHLDVSWVEHGEWNLQPADYLEMVRLKTGFYTIVTPLRLGALAAG--QPPHPDF 197 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ--RGTKRE 249 ++ G++LG AFQ+ DDVL+ G+ + GK IG D GK TL V+ Q R T+R Sbjct: 198 EAAGLSLGTAFQIRDDVLNLTGDPAKYGKEIGGDLLEGKRTLVVLHWLQHARETRRH 254 >gi|294811348|ref|ZP_06769991.1| Putative polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|326439920|ref|ZP_08214654.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|294323947|gb|EFG05590.1| Putative polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] Length = 362 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 86/296 (29%), Positives = 132/296 (44%), Gaps = 35/296 (11%) Query: 41 GGKRLRPMLTLATALML---EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK--- 94 GGKRLR L A ++ E G + A ++E +HT L+HDD+VDD+ LRRG Sbjct: 60 GGKRLRVALLHEAARLVTDAEVPGLDEA--ALSVELLHTHGLVHDDIVDDAPLRRGAPSV 117 Query: 95 -VAARLVWGNQT------SVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE--L 145 A R + Q +VL GD + +++E + L T A E L Sbjct: 118 YYAYRAEFPGQERTAVGLAVLAGDLAAFLSVQVLLEAPLPDGLRLALAQEQTRASAETVL 177 Query: 146 RQ-LSLSKNL-DVTEEDYLHVIKSKTAVLFS--AALEVSSLIAGVQNSVRQA-LKSYGMN 200 Q L L +++ + +D+LH + + +S A L + L AG L+ Y + Sbjct: 178 GQFLDLERDVPPLPGDDFLHTVTEFKSARYSILAPLRLGLLAAGEDPEPYAGELRRYAVL 237 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV--ILAFQRGTKREKNFWKSTIN 258 +GI Q+ DD LD G+ GK +G D R+G+ T V +LA G R++ +S + Sbjct: 238 VGIYEQMRDDYLDLFGDPAVTGKPVGTDLRDGRRTYAVNALLAGVDGADRKRV--ESALG 295 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRA--YSYGQKAKDSLRCLPDSSWKKSLME 312 D + + + R RA VD RA Y ++A D + W+ E Sbjct: 296 DPGCDDATIAEIGALAR--RAGVDERLRATMLRYAREASDEA-----AGWRPRWRE 344 >gi|296230923|ref|XP_002760938.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1 [Callithrix jacchus] gi|296230925|ref|XP_002760939.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2 [Callithrix jacchus] Length = 300 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 21/216 (9%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ F + + + + +A+ L C L E L + L Sbjct: 77 PVAHSIYGIPSVINSANYVY---FLGLEKVLTLDHPDAVKLFTCQLLE-----LHQGQGL 128 Query: 155 DV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 D+ TEE+Y ++ KT LF A+ + L + + ++ L + LG+ F Sbjct: 129 DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGLFF 184 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 Q+ DD + + K+ ED GK + P I A Sbjct: 185 QIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|331006565|ref|ZP_08329857.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989] gi|330419634|gb|EGG94008.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989] Length = 224 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 19/225 (8%) Query: 70 AIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAF---CMVIET 124 A+E IH +L+HDD+ LRRGK + + T++L GD L + AF C ++ Sbjct: 2 AVEAIHAYSLIHDDLPAMDDDDLRRGKPTCHIAFDEATAILAGDALQAFAFNILCEAVDA 61 Query: 125 KSQEALEAL-SLVACTLAEGELRQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALE 178 L+ L +L + A G + S+ + L + + + +H +K T L SA+ Sbjct: 62 DPSIQLKMLHTLSHASGANGMVGGQSIDLAAVQQTLTLNQLETMHRLK--TGALISASTR 119 Query: 179 VSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +L G+ + S QAL Y +G+AFQ+ DD+LD + + +GK G D KPT Sbjct: 120 LGALSTGIASESQLQALHEYANAIGLAFQVQDDILDVTSDTHTLGKQQGADAALNKPTYI 179 Query: 238 VILAFQRGTKREKNFWKSTIN--DG-KISVENLKK--AFIIMREN 277 +L ++ K + ++ G +NL+ A+II R + Sbjct: 180 ALLGLDAAQQKAKTLHEQALDALSGFDYRADNLRHLSAYIINRRS 224 >gi|255027667|ref|ZP_05299653.1| hypothetical protein LmonocytFSL_17247 [Listeria monocytogenes FSL J2-003] Length = 129 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 2/90 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y I +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 38 YSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 K V+G+ T++L GD LL+ AF ++ E Sbjct: 98 KWTNHKVFGDATAILAGDALLTLAFSILAE 127 >gi|119495313|ref|XP_001264444.1| geranylgeranyl diphosphate synthase [Neosartorya fischeri NRRL 181] gi|119412606|gb|EAW22547.1| geranylgeranyl diphosphate synthase [Neosartorya fischeri NRRL 181] Length = 389 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 19/223 (8%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK +R L A + L+ ++ ++ + +HTA+LL DDV D+S LRRG Sbjct: 85 YMQQHPGKDIRRQLITAFNVWLQVPPESLSIITKVVGMLHTASLLVDDVEDNSILRRGIP 144 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + + A++ L G+ L L Sbjct: 145 VAHNIFGTAQTINSANYVYFLALQEVQKLNNPTAIDIFVQELLNLHRGQGMDLFWRDTLT 204 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-------LGIAFQL 207 TEEDYL ++ +KT LF A++ + QA + G++ +G+ FQ+ Sbjct: 205 CPTEEDYLDMVGNKTGGLFRLAIK-----------LMQAESTTGIDCVSLVNVMGLTFQI 253 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 DD L+ + K + ED GK + P+I + + + + Sbjct: 254 CDDYLNLSNKTYTQNKGLCEDLTEGKFSFPIIHSIRSNPRNHQ 296 >gi|41408009|ref|NP_960845.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396364|gb|AAS04228.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 348 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 142/326 (43%), Gaps = 30/326 (9%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLL 80 I D + ++ + +GGKRLRP A+ E D +LL A+E +H L+ Sbjct: 23 IGDDYSGLIAALEEFVLNGGKRLRPAFAYWGWRAVATEAPDDQALLLFSALELLHACALV 82 Query: 81 HDDVVDDSALRRGKVAARL---------VW-------GNQTSVLVGDFLLSQAFCMV--I 122 HDDV+DDSA RRG+ + W G ++L+GD L+ A +V + Sbjct: 83 HDDVIDDSATRRGRPTTHVRFASLHRDRQWQGSPERFGMSAAILLGDLALAWADDIVLGV 142 Query: 123 ETKSQEALEALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALE 178 + Q A + A E G+ + + + ++V KTA S L+ Sbjct: 143 DLTPQAARRVRRVWANIRTEVLGGQYLDIVAEASAAASIASAMNVDTFKTACYTVSRPLQ 202 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + A + V +G +LG+AFQL DDVL G+ GK G+D R+GK T+ + Sbjct: 203 LGAAAAD-RPDVHDLFSQFGTDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTVLL 261 Query: 239 ILAFQRGTKREK---NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 A + K + + +I ++S + + ++ AL E R + Q+A Sbjct: 262 AEAVELAEKSDPLAAKLLRDSIG-AQLSDAEVDRLRDVIESVGALAAAEQRIATLTQRAL 320 Query: 296 DSLRCLP-DSSWKKSLMEVVDFCLQR 320 +L P +++ K L E+ R Sbjct: 321 ATLAAAPINTAAKAGLSELAKLATNR 346 >gi|329946884|ref|ZP_08294296.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386] gi|328526695|gb|EGF53708.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386] Length = 386 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 58/272 (21%) Query: 28 EMIPDVVKYL--IFSGGKRLRPMLTLATALML---EYR-----GDNHVLLACAIEFIHTA 77 + P+++K + GGKR+R +L +L E+R G + V L A+E + Sbjct: 35 QAAPELLKAADSVLGGGKRMRAVLGAVGCTILSAPEHRNKELTGASAVHLGAALELYQAS 94 Query: 78 TLLHDDVVDDSALRRGKVAAR--LVWGNQTSVLVGDFLLSQAFC--------MVIETKSQ 127 L+HDD++D ++ RRG AA W ++T +G S+AF ++ + + Sbjct: 95 ALVHDDLMDGASTRRGLPAAHHAFAWEHETRGWLGH---SRAFGSNGAILLGDLLLSLAG 151 Query: 128 EALEALSLVACTLAEGE-------------LRQLSLSKNLDVTEE--------------- 159 E + AL+ + G+ +++L + LDV E Sbjct: 152 EEMSALAQAHTSSGCGDEAVGHARAAFDAMTTEVALGQYLDVRSENLPLPWGQDPAAAAQ 211 Query: 160 ----DYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQA--LKSYGMNLGIAFQLVDDVL 212 D L V++ K+A L + +L+AG+ S A L +G +GIAFQL DD L Sbjct: 212 RMRDDALSVVRHKSARYSVRHPLLIGALLAGMAPSSPTAKHLAEFGEEIGIAFQLRDDEL 271 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G GK G+D R GK T+ + LA+ R Sbjct: 272 GVFGSPRVTGKPAGDDLREGKRTVLLALAWGR 303 >gi|122890375|emb|CAL34101.1| putative trans-polyprenyl diphosphate synthetase [Streptomyces cinnamonensis] Length = 352 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 73/240 (30%), Positives = 106/240 (44%), Gaps = 41/240 (17%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDN--HVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 L+ +GGKR+RP +A L D+ V A A+E +H + L+HDDV+D S+ RRG+ Sbjct: 57 LVAAGGKRIRPAFCIAGYLAAGGDPDDTAVVAAAAALEMLHASALIHDDVIDASSHRRGR 116 Query: 95 VAA---------RLVW-------GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 R W G ++LVGD L + E L A + A Sbjct: 117 PTVHARHSALHDRNAWQGESRRYGEGVAILVGDLALVYS----------EQLMAAAPPAV 166 Query: 139 TLAEGELR-QLSLSKNLDVTE----------EDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 G LR +L + + +D+T ++ + KS + L V + AG + Sbjct: 167 LPVWGTLRSELMIGQYMDMTAAAEFLVDPRLSRWIALAKSGHYTIHRP-LVVGASAAG-R 224 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + A YG +G AFQL DD+LD G+ GK G DF K TL + A QR + Sbjct: 225 ADLAPAFAKYGEAVGEAFQLRDDLLDAFGDFAHTGKPAGLDFSQHKMTLLLSWAMQRDAR 284 >gi|302557424|ref|ZP_07309766.1| polyprenyl diphosphate synthase [Streptomyces griseoflavus Tu4000] gi|302475042|gb|EFL38135.1| polyprenyl diphosphate synthase [Streptomyces griseoflavus Tu4000] Length = 391 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 103/239 (43%), Gaps = 26/239 (10%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDD 87 + D V L+ GGKRLR GD +L A+E + L+HDDV+D Sbjct: 65 LADRVGALVSRGGKRLRAAFAFCGWRAAGGTGDATAVLRTGAALELLQACALVHDDVMDG 124 Query: 88 SALRRGKVA-----ARLVW-----------GNQTSVLVGDFLLSQAFCMVIET-----KS 126 S RRG A AR W G ++VL GD L+ A ++ ET Sbjct: 125 SLRRRGGPALHVELARGHWAAGMHGSAEAFGTSSAVLAGDLALAWADDLLTETALGTPHG 184 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA--LEVSSLIA 184 E + + G+ R L ++ L + K+A L++ A L + +A Sbjct: 185 GRLHEEWRAMRTEMVAGQYRDLHAQAARSSGVDEALDIATLKSA-LYTVARPLALGGSLA 243 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G + AL++ G G+AFQL DD+L G+ GK G+D R+ K T + +A + Sbjct: 244 GAGDRTLDALRAAGRCAGLAFQLRDDLLGAFGDPALTGKPAGDDLRSRKLTYLLAVALR 302 >gi|312881852|ref|ZP_07741623.1| hypothetical protein VIBC2010_06329 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370498|gb|EFP97979.1| hypothetical protein VIBC2010_06329 [Vibrio caribbenthicus ATCC BAA-2122] Length = 297 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 8/216 (3%) Query: 13 EKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 E++N I+K +C + + VKY SGG + R +L TA + +LLAC++ Sbjct: 21 EQINQEIVK-LCKNAGSKTVEQVKYHQRSGGSKRRALLCYDTARSFNHSHQTALLLACSV 79 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEA 129 E +H A+L+HDD+ D RR + A + ++ VGD L++ A+ + + +++ Sbjct: 80 ELLHNASLIHDDIQDQDMTRRDQAALWVKSSVAEAICVGDSLIAAAYMALGQLAIFNEKL 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + +SL +G++ + + + Y V K K A L ++E+ SL+A + Sbjct: 140 IPLVSLRVMQTIKGQMSDIGQGQ---FSRSSYTDVAKEKAAPLLRLSVELPSLLAN-SSI 195 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 + + L IA+Q DD+ D + NI Sbjct: 196 IGEKLAEAAELFAIAYQFNDDISDQIHDAQHNEPNI 231 >gi|221640630|ref|YP_002526892.1| Farnesyl-diphosphate synthase [Rhodobacter sphaeroides KD131] gi|221161411|gb|ACM02391.1| Farnesyl-diphosphate synthase [Rhodobacter sphaeroides KD131] Length = 289 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 17/241 (7%) Query: 25 SDVEMIPDV--VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 +D E +P V ++Y + GGKRLR L L +A + + V A +IE +H +L+HD Sbjct: 23 ADREDLPVVHAMRYAV-QGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHD 81 Query: 83 DVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 D+ LRRG W T+VL GD L + AF ++ + A + LVA Sbjct: 82 DMPCMDDDDLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALGSAEVRIELVASLA 141 Query: 141 AEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + L + LD+ E H+ KT L + E +++ + R Sbjct: 142 KASGAEGMVLGQALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAILG---QADR 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L+ Y LG+AFQ+ DD+LD G+ + GK + +D GK T +L R + Sbjct: 199 VPLRRYATALGLAFQIADDILDVEGDAEKAGKRLQKDAEAGKATFVSLLGLDGAKARARA 258 Query: 252 F 252 Sbjct: 259 L 259 >gi|126463556|ref|YP_001044670.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17029] gi|332559609|ref|ZP_08413931.1| polyprenyl synthetase [Rhodobacter sphaeroides WS8N] gi|126105220|gb|ABN77898.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17029] gi|332277321|gb|EGJ22636.1| polyprenyl synthetase [Rhodobacter sphaeroides WS8N] Length = 289 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 17/241 (7%) Query: 25 SDVEMIPDV--VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 +D E +P V ++Y + GGKRLR L L +A + + V A +IE +H +L+HD Sbjct: 23 ADREDLPVVHAMRYAV-QGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHD 81 Query: 83 DVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 D+ LRRG W T+VL GD L + AF ++ + A + LVA Sbjct: 82 DMPCMDDDDLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALGPAEVRIELVASLA 141 Query: 141 AEGELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + L + LD+ E H+ KT L + E +++ + R Sbjct: 142 KASGAEGMVLGQALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAILG---QADR 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L+ Y LG+AFQ+ DD+LD G+ + GK + +D GK T +L R + Sbjct: 199 VPLRRYATALGLAFQIADDILDVEGDAEKAGKRLQKDAEAGKATFVSLLGLDGAKARARA 258 Query: 252 F 252 Sbjct: 259 L 259 >gi|39974191|ref|XP_368486.1| hypothetical protein MGG_00758 [Magnaporthe oryzae 70-15] gi|145018310|gb|EDK02589.1| hypothetical protein MGG_00758 [Magnaporthe oryzae 70-15] Length = 412 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 23/238 (9%) Query: 13 EKVNFLILKRICSD--VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 E NF K+ S+ +++ YL+ GK R + +A LE ++ L+ Sbjct: 107 EDFNFTTTKKTWSEDKEKVVCGPFDYLLGQPGKDFRTQIIMAFNAWLEVPSESLELITHV 166 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 + +HTA+LL DDV D+S+LRRG A ++G ++ +++ F + E K Sbjct: 167 VGMLHTASLLVDDVEDNSSLRRGLPVAHSIFGVPQTINSANYIY---FAALQELKKLSNP 223 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSS 181 EA+S+ A EL L + +D+ TE+DYL ++ +KT LF ++ Sbjct: 224 EAVSIFA-----EELIHLHRGQGMDLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIK--- 275 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + +++ +G+ FQ+ DD + K + ED GK + PVI Sbjct: 276 -LMQAESAFPTDCIPLANLIGLIFQIRDDYQNLFSREYSNNKGMCEDLTEGKFSFPVI 332 >gi|209570224|emb|CAP74388.1| geranylgeranyl diphosphate synthase [Gibberella intermedia] Length = 393 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 3/211 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ K +R + + L+ D ++ I+ +H ++L+ DD D S LRRGK Sbjct: 102 YILTLPSKGIRGAFIDSLNVWLDVPEDKAQVIKDVIDMLHNSSLIIDDFQDGSPLRRGKP 161 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + V+G ++ +++ +A + E S +AL ++ T+ +G+ L + N Sbjct: 162 STHTVFGPAQAINTATYIIVKAIERIQEIVSHDALADITGTITTIFQGQAMDLWWTANTI 221 Query: 156 VTE-EDYLHVIKSKTAVLFSAALEVSSLI--AGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + ++YL ++ KT LF +LE+ +L A + +S ++L S LG FQ+ DD + Sbjct: 222 LQSIQEYLLMVNDKTGALFRLSLELLALNSEAPISDSTLESLSSVVSLLGQYFQIRDDYM 281 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + K ED GK +L +I A Q Sbjct: 282 NLIDNKYTDQKGFCEDLDEGKYSLTLIHALQ 312 >gi|239610018|gb|EEQ87005.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis ER-3] Length = 405 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/296 (25%), Positives = 123/296 (41%), Gaps = 41/296 (13%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK +R A L D+ ++ + +HTA+LL DDV D S LRRG Sbjct: 101 YMVQQPGKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDVEDSSNLRRGVP 160 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + KS + + L G+ + L Sbjct: 161 VAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHRGQGMDVFWRDTLT 220 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-------LGIAFQL 207 TEEDYL ++ +KT LF A++ + QA G++ +G+ FQ+ Sbjct: 221 CPTEEDYLEMVGNKTGGLFRLAIK-----------LMQAESDSGIDCVALVNLMGLIFQI 269 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF--------------QRGTKRE---- 249 DD L+ K ED GK + P+I + Q+ T E Sbjct: 270 CDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIRSQPDNLQLINILKQKTTDEEVKRY 329 Query: 250 -KNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 N+ +ST + K V+ KA +++ E L D A G+++ D +R + Sbjct: 330 AVNYMESTGSFAYTRKTVVQLRDKALLLIDELEKLTDMTQGASQKGERSGDMVRSI 385 >gi|73952570|ref|XP_536340.2| PREDICTED: similar to geranylgeranyl diphosphate synthase 1 [Canis familiaris] Length = 300 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + N Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLQKVLTLDHPDAVKLFTHQLLELHQGQGLDIYWRDNY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|149638233|ref|XP_001512343.1| PREDICTED: similar to Geranylgeranyl diphosphate synthase 1 [Ornithorhynchus anatinus] Length = 301 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLNVPEDKKQVIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + N Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + S ++ LK LG+ FQ+ DD + Sbjct: 137 TCPTEEEYRAMVLQKTGGLFGLAVGLMQLFS----SYKEDLKPLLDTLGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|1549220|dbj|BAA13462.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus] Length = 344 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 10/227 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D+++ GGK LR +LT+ +AL + + A A+E L+HDD+ D S R Sbjct: 29 DLLQDYPRRGGKMLRGLLTVYSALAHGAPLEAGLETATALELFQNWVLVHDDIEDGSEER 88 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-----EALEALSLVACTLAEGELR 146 RG+ A + ++ GD + ++ + ++ E ++ E L V A G+ Sbjct: 89 RGRPALHRLHPMPLALNAGDAMHAEMWGLLAEGLARGLFPPEVLLEFHEVVRRTAYGQHL 148 Query: 147 QL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L +L D+ EDY ++ K AV ++A + + + V + A + G+ LG A Sbjct: 149 DLLWTLGGTFDLRPEDYFRMVAHK-AVYYTAVVPLRLGVLLVGKTPPAAYEEGGLRLGTA 207 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 FQ+VDDVL+ G GK D GK TL ++L F T E+ Sbjct: 208 FQIVDDVLNLEGG-EAYGKERTGDLYEGKRTL-ILLRFLEETPPEER 252 >gi|327350942|gb|EGE79799.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 405 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/296 (25%), Positives = 123/296 (41%), Gaps = 41/296 (13%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK +R A L D+ ++ + +HTA+LL DDV D S LRRG Sbjct: 101 YMVQQPGKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDVEDSSNLRRGVP 160 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + KS + + L G+ + L Sbjct: 161 VAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHRGQGMDVFWRDTLT 220 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-------LGIAFQL 207 TEEDYL ++ +KT LF A++ + QA G++ +G+ FQ+ Sbjct: 221 CPTEEDYLEMVGNKTGGLFRLAIK-----------LMQAESDSGIDCVALVNLMGLIFQI 269 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF--------------QRGTKRE---- 249 DD L+ K ED GK + P+I + Q+ T E Sbjct: 270 CDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIRSQPDNLQLINILKQKTTDEEVKRY 329 Query: 250 -KNFWKSTIN---DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 N+ +ST + K V+ KA +++ E L D A G+++ D +R + Sbjct: 330 AVNYMESTGSFAYTRKTVVQLRDKALLLIDELEKLTDMTQGASQKGERSGDMVRSI 385 >gi|108802037|ref|YP_642234.1| polyprenyl synthetase [Mycobacterium sp. MCS] gi|119871189|ref|YP_941141.1| polyprenyl synthetase [Mycobacterium sp. KMS] gi|108772456|gb|ABG11178.1| Polyprenyl synthetase [Mycobacterium sp. MCS] gi|119697278|gb|ABL94351.1| Polyprenyl synthetase [Mycobacterium sp. KMS] Length = 374 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 105/259 (40%), Gaps = 28/259 (10%) Query: 12 MEKVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 ++ V + R D V++ DV+ + S GK LR L D + Sbjct: 37 IDAVTEFVTDRCADDLRLTGVDVTLDVLSDFV-SDGKCLRSTFAYLGWLAGAAPDDAALR 95 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARL---VW-------------GNQTSVLVG 110 A + + +H LL DDV+DDS LRRG+ AA + W G +VL+G Sbjct: 96 AAASFDLLHVFALLQDDVMDDSPLRRGRPAAHVRFAQWHRDNGLNGSAERFGASAAVLLG 155 Query: 111 DFLLSQAFCMVIETKSQE-----ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 D L A M+ E+ + A + LA G+ L T ED L V Sbjct: 156 DLCLVWAGQMMRESGLGDRALARAWPRYDAMRTELAVGQFADLVNDAGGRPTLEDVLDVA 215 Query: 166 KSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + K+ LE+ +AG ++ L YG +G AFQL DD+L G GK Sbjct: 216 RRKSGNYTVRRPLEIGGALAGCPDATLGLLGRYGAAVGEAFQLRDDLLGIFGAPTVTGKP 275 Query: 225 IGEDFRNGKPTLPVILAFQ 243 G D K T V+ A + Sbjct: 276 AGGDLSEHKATSVVVAAHR 294 >gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana] Length = 326 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 26/212 (12%) Query: 32 DVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VD 86 + ++Y + + G KR P++ +A + + GD ACA+E +H A+L+HDD+ +D Sbjct: 76 EAMRYSVLAQGAKRAPPVMCVAACEL--FGGDRLAAFPTACALEMVHAASLIHDDLPCMD 133 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----------ALSL 135 D +RRGK + V+G+ ++L GD L AF ++ + + A ++ Sbjct: 134 DDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTV 193 Query: 136 VACTLAEGELRQLSLSK-NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + +A G+ L L +E + +AV L+ G Q+L Sbjct: 194 GSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAV-------CGGLLGGATEDELQSL 246 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 + YG +G+ +Q+VDD+ + + + + G G Sbjct: 247 RRYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278 >gi|194042553|ref|XP_001924804.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Sus scrofa] Length = 300 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + N Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|119331238|ref|NP_001073269.1| geranylgeranyl pyrophosphate synthase [Bos taurus] gi|143811398|sp|P56966|GGPPS_BOVIN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|111305299|gb|AAI20314.1| Geranylgeranyl diphosphate synthase 1 [Bos taurus] gi|296472248|gb|DAA14363.1| geranylgeranyl pyrophosphate synthetase [Bos taurus] Length = 300 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + N Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQLLELHQGQGLDIYWRDNY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|213027491|ref|ZP_03341938.1| hypothetical protein Salmonelentericaenterica_36003 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 113 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 1/112 (0%) Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLK 268 DD+LDY + +GKN+G+D GKPTLP++ A + GT + ++ I G L+ Sbjct: 1 DDLLDYSADGEHLGKNVGDDLNEGKPTLPLLHAMRHGTPEQSAMIRTAIEQGN-GRHLLE 59 Query: 269 KAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 M +L T RA KA +L+ LPD+ W+++L+ + +QR Sbjct: 60 PVLEAMTTCGSLEWTRQRAEEEADKAISALQILPDTPWREALIGLAHIAVQR 111 >gi|15233848|ref|NP_195558.1| GGR (geranylgeranyl reductase); farnesyltranstransferase [Arabidopsis thaliana] gi|85680919|sp|Q39108|GGR_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase-related protein, chloroplastic; Flags: Precursor gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana] gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana] gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana] Length = 326 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 26/212 (12%) Query: 32 DVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VD 86 + ++Y + + G KR P++ +A + + GD ACA+E +H A+L+HDD+ +D Sbjct: 76 EAMRYSVLAQGAKRAPPVMCVAACEL--FGGDRLAAFPTACALEMVHAASLIHDDLPCMD 133 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----------ALSL 135 D +RRGK + V+G+ ++L GD L AF ++ + + A ++ Sbjct: 134 DDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTV 193 Query: 136 VACTLAEGELRQLSLSK-NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + +A G+ L L +E + +AV L+ G Q+L Sbjct: 194 GSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAV-------CGGLLGGATEDELQSL 246 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 + YG +G+ +Q+VDD+ + + + + G G Sbjct: 247 RRYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278 >gi|312383692|gb|EFR28678.1| hypothetical protein AND_03051 [Anopheles darlingi] Length = 197 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 5/186 (2%) Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 V L +GE QL + + Y KTA L + +L+ ++++G + + Sbjct: 16 VLTDLVQGEFMQLGSKETENERFAHYFTKTYRKTASLIANSLKAVAVLSGADEQMAELSF 75 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 YG NLG+AFQ VDD+LD+ MGK D + G T PV+ A ++ + + Sbjct: 76 QYGRNLGLAFQFVDDLLDFVSSSEAMGKPAAADLKLGLATAPVLFACEKFPELNPMILRR 135 Query: 256 TINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 G ++++A+ ++ +++ L T + A + +A + +S ++K L+ V D Sbjct: 136 FREPG-----DVERAYELVHQSQGLEQTRFLARKHCIEALRLASQISESPYQKGLIVVGD 190 Query: 316 FCLQRL 321 F L R+ Sbjct: 191 FVLNRM 196 >gi|301792142|ref|XP_002931038.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Ailuropoda melanoleuca] Length = 300 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + N Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQGQGLDIYWRDNY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|269926570|ref|YP_003323193.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269790230|gb|ACZ42371.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 345 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 19/229 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D +M+P + GK LRP L + + + + A AIE +H TL+HDD+ Sbjct: 48 DEQMVPGDSQ-----SGKMLRPRLCILSCMAAGGEVRKAIPAAAAIEILHNFTLVHDDIE 102 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVAC----- 138 D S RR + + + G ++ GD F++S MV+++ + + A +++A Sbjct: 103 DHSPSRRHRPSLWKLIGVPLALNAGDGMFVISH---MVLQSMLELGVPAQTVLAAIDKFD 159 Query: 139 ----TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 ++ EG+ L +V+ ++YL +I KT L + + +L+AG V + Sbjct: 160 QAALSVCEGQHMDLMFEAREEVSLQEYLAMISRKTGALMGLSCYLGALVAGKDECVLEQY 219 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + +G NLG+A+Q+ DD+ GK ED K + P++ A + Sbjct: 220 RHFGENLGLAYQIRDDIAGIWESSESTGKRELEDIFRKKKSYPIVKAME 268 >gi|297281802|ref|XP_002802154.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1 [Macaca mulatta] gi|297281804|ref|XP_002802155.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2 [Macaca mulatta] gi|297281806|ref|XP_002802156.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3 [Macaca mulatta] gi|297281808|ref|XP_002802157.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4 [Macaca mulatta] Length = 300 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + N Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|296393493|ref|YP_003658377.1| polyprenyl synthetase [Segniliparus rotundus DSM 44985] gi|296180640|gb|ADG97546.1| Polyprenyl synthetase [Segniliparus rotundus DSM 44985] Length = 378 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 107/246 (43%), Gaps = 33/246 (13%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGD------NHVLLACA-IEFIHTATLLHDDVVDDSA 89 L+ GKR+RP A L GD V CA +E + L+HDD++D S Sbjct: 64 LVLGSGKRVRP--AFAWLGWLGAGGDAAGPDAGAVQRVCAALELLQAGLLVHDDIIDQSD 121 Query: 90 LRRGKVA---------ARLVW-------GNQTSVLVG-------DFLLSQAFCMVIETKS 126 LRRG+ + +R W G ++L G D L ++ V Sbjct: 122 LRRGEPSLHRRFEAEHSREGWSGDAARHGEALAILAGELAFVWADDLAAEGLDAVAGADR 181 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA-ALEVSSLIAG 185 + S + + G+ + D +EE VI+ KTA A LE+ ++A Sbjct: 182 TAFRKVWSAMRAEVIGGQCLDVLAQAGDDESEEAATRVIRWKTASYTVARPLELGGVLAC 241 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 S+ +S+G ++G+AFQL DD+L G+ GK G+D R GK T+ + LA + Sbjct: 242 ANESLLTFYRSFGDDVGVAFQLHDDLLGVFGDPAVTGKPAGDDVREGKRTVLMALALRSA 301 Query: 246 TKREKN 251 + KN Sbjct: 302 CEVGKN 307 >gi|4758430|ref|NP_004828.1| geranylgeranyl pyrophosphate synthase [Homo sapiens] gi|83700220|ref|NP_001032354.1| geranylgeranyl pyrophosphate synthase [Homo sapiens] gi|332812275|ref|XP_003308874.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1 [Pan troglodytes] gi|332812277|ref|XP_003308875.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2 [Pan troglodytes] gi|332812279|ref|XP_003339061.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Pan troglodytes] gi|332812283|ref|XP_003308876.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3 [Pan troglodytes] gi|6831549|sp|O95749|GGPPS_HUMAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|5410359|gb|AAD43050.1|AF125394_1 gerannylgeranyl pyrophosphate synthase [Homo sapiens] gi|12024672|gb|AAG45581.1|AF057698_1 geranylgeranyl pyrophosphate synthetase [Homo sapiens] gi|4520350|dbj|BAA75909.1| geranylgeranyl diphosphate synthase [Homo sapiens] gi|4586866|dbj|BAA76511.1| GGPP synthase [Homo sapiens] gi|4730813|dbj|BAA77251.1| geranylgeranyl pyrophosphate synthase [Homo sapiens] gi|13528915|gb|AAH05252.1| Geranylgeranyl diphosphate synthase 1 [Homo sapiens] gi|55960163|emb|CAI13753.1| geranylgeranyl diphosphate synthase 1 [Homo sapiens] gi|119590422|gb|EAW70016.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens] gi|119590423|gb|EAW70017.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens] gi|119590425|gb|EAW70019.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens] gi|261861372|dbj|BAI47208.1| geranylgeranyl diphosphate synthase 1 [synthetic construct] gi|312152218|gb|ADQ32621.1| geranylgeranyl diphosphate synthase 1 [synthetic construct] Length = 300 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + N Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|304321788|ref|YP_003855431.1| geranylgeranyl pyrophosphate synthase [Parvularcula bermudensis HTCC2503] gi|303300690|gb|ADM10289.1| geranylgeranyl pyrophosphate synthase [Parvularcula bermudensis HTCC2503] Length = 316 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 18/239 (7%) Query: 27 VEMIPDV------VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 ++IP V ++ + + GKR+R +LTL A + + ACA+E IHTA+L+ Sbjct: 36 ADLIPAVGPPAEAARHSLLAPGKRIRAVLTLLAARECGGSLERALDTACAVEMIHTASLV 95 Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 DD+ +DD+ LRRG+ +G T++L LL+ A+ +V+ + A E + + Sbjct: 96 IDDLPAMDDADLRRGRPTCHRAFGESTAILAAIGLLNGAYGVVMAAEPLSAAEKTKIASI 155 Query: 139 TLAEGELRQLSLSKNLDVTE-EDYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + R L + LD+ L I+ KT VLF AA+ AG + AL + Sbjct: 156 LSSAVGWRGLVQGQALDLNPGTTSLETIQDGKTGVLFEAAVLAGEQTAGWVSEKSVALAA 215 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 + LG A+Q +DD+LD V+ + K+ G D +GK T A G + E K+ Sbjct: 216 FATALGRAYQALDDLLDLIDSVSAL-KSTGRD--DGKRT-----ALSEGGESEDTVSKA 266 >gi|119713712|gb|ABL97762.1| crtE geranylgeranyl diphosphate synthase [uncultured marine bacterium EB0_41B09] Length = 322 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 24/253 (9%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 S GK LR L LAT +L ++ A E IH+A+LLHDD+ D LRRG+ + Sbjct: 46 SQGKWLRARLALATGGLLGISSQTYINWAVVCELIHSASLLHDDICDQDNLRRGQTSLWK 105 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIET-KSQEALEALSLVACTLAE---GELRQLSLSKNLD 155 +G +V GD+L++++F + E + L L++ ++ E G+ + +S+S + Sbjct: 106 EFGIPAAVCTGDYLIAESFRKITEIDQGWHQTILLKLLSYSVKEIIFGQSKDISISP-YE 164 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD-- 213 +T + Y + +KTA + + + + L+ LG+++Q ++D+ + Sbjct: 165 MTWDQYTKMATNKTAPFIALPMMGMFNCNECSKAECEGLQESSDILGLSYQWLNDLENLI 224 Query: 214 ----------YRGEVNEMGKNIGEDFRNGK-------PTLPVILAFQRGTKREKNFWKST 256 Y N M NI +D + P+ + + K +KN K+ Sbjct: 225 GVDQDKFTDIYNNHPNGMLINILQDIDESEKIEIIKDPSTLIEHLNEIAFKNQKNMIKNL 284 Query: 257 INDGKISVENLKK 269 +ND K + + K Sbjct: 285 LNDAKNNFHRVPK 297 >gi|150261574|pdb|2Q80|A Chain A, Crystal Structure Of Human Geranylgeranyl Pyrophosphate Synthase Bound To Ggpp gi|150261575|pdb|2Q80|B Chain B, Crystal Structure Of Human Geranylgeranyl Pyrophosphate Synthase Bound To Ggpp gi|150261576|pdb|2Q80|C Chain C, Crystal Structure Of Human Geranylgeranyl Pyrophosphate Synthase Bound To Ggpp gi|150261577|pdb|2Q80|D Chain D, Crystal Structure Of Human Geranylgeranyl Pyrophosphate Synthase Bound To Ggpp gi|150261578|pdb|2Q80|E Chain E, Crystal Structure Of Human Geranylgeranyl Pyrophosphate Synthase Bound To Ggpp gi|150261579|pdb|2Q80|F Chain F, Crystal Structure Of Human Geranylgeranyl Pyrophosphate Synthase Bound To Ggpp Length = 301 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 18 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 77 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + N Sbjct: 78 PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNY 137 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 138 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGLFFQIRDDYAN 193 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 194 LHSKEYSENKSFCEDLTEGKFSFPTIHA 221 >gi|62510700|sp|Q9P885|GGPPS_RHIRA RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|7649674|emb|CAB89115.1| geranylgeranyl pyrophosphate synthase [Mucor circinelloides f. lusitanicus] Length = 303 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 10/276 (3%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S ++I + YLI GK +R L A L L D ++ I +H A+L+ DDV Sbjct: 12 STEDIILEPYTYLISQPGKDIRAKLISAFDLWLHVPKDVLCVINKIIGMLHNASLMIDDV 71 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 DDS LRRG A ++G ++ ++++ A V++ ++ + L G+ Sbjct: 72 QDDSDLRRGVPVAHHIYGVPQTINTANYVIFLALQEVMKLNIPSMMQVCTEELINLHRGQ 131 Query: 145 LRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 +L +L TEE+Y+ ++ +KT+ L A+ L+ S + +GI Sbjct: 132 GIELYWRDSLTCPTEEEYIDMVNNKTSGLLRLAVR---LMQAASESDIDYTPLVNI-IGI 187 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 FQ+ DD ++ + K ED GK + P+I A ++ + + I+ S Sbjct: 188 HFQVRDDYMNLQSTSYTNNKGFCEDLTEGKFSFPIIHAIRKDPSNRQLL--NIISQKPTS 245 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 +E K A ++R+ + EY QK +SL+ Sbjct: 246 IEVKKYALEVIRKAGSF---EYVREFLRQKEAESLK 278 >gi|315501045|ref|YP_004079932.1| polyprenyl synthetase [Micromonospora sp. L5] gi|315407664|gb|ADU05781.1| Polyprenyl synthetase [Micromonospora sp. L5] Length = 384 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 75/246 (30%), Positives = 107/246 (43%), Gaps = 52/246 (21%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLA-----CAIEFIHTATLLHDDVVDDSALRR 92 + +GGKR+RP T A G L + A+E +HT L+HDDV+D S RR Sbjct: 73 VLAGGKRVRP--TFAYWGWRGVVGGEEPLCSVLPALSALELLHTFALVHDDVMDASDTRR 130 Query: 93 GKVAARLV----------------WGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALS 134 G A +G +VL+GD CMV + + A+ A Sbjct: 131 GLPTAHRAAAARHRAAGHTGDPDRYGEAVAVLIGDL------CMVWADRLMAHAAVPAER 184 Query: 135 LVACTLAEGELRQLSLSKN-LDVTEED---------YLHVIKSKTA-------VLFSAAL 177 L+ ++R +++ LDV E+ L V + KTA +LF A L Sbjct: 185 LLDVRRCYDQMRVETVAGQFLDVLGENDSASWTVDRALRVARYKTASYTVQRPLLFGACL 244 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 A + + A YG+ +G AFQL DD+L G+ GK G+D R GKPT Sbjct: 245 AG----ADADDPLIAAYTRYGLAVGEAFQLRDDLLGVYGDPETTGKPAGDDLRTGKPTAL 300 Query: 238 VILAFQ 243 ++LA Q Sbjct: 301 LMLARQ 306 >gi|238586537|ref|XP_002391204.1| hypothetical protein MPER_09404 [Moniliophthora perniciosa FA553] gi|215455564|gb|EEB92134.1| hypothetical protein MPER_09404 [Moniliophthora perniciosa FA553] Length = 276 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 20/249 (8%) Query: 19 ILKRICSDVEM-------IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 +L+R+ S+ E I + Y+ + GK +R A L L + +A + Sbjct: 10 LLERLSSEWEWSQKNESCIMEPYTYITSNPGKDIRSQFIAAFNLWLTVPEEKTKAIARVV 69 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 +H+A+LL DD+ D+S LRRG A ++G ++ +++ AF + + + ++A Sbjct: 70 NMLHSASLLIDDIQDNSQLRRGSPVAHKIYGVPQTINTANYVYFLAFQEISKLREEDAKS 129 Query: 132 ALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSL 182 + EL L + LD+ TE++Y+ ++ +KT L +++ Sbjct: 130 RQGPDVDAIVTDELLSLHRGQGLDLFWRDSLQCPTEDEYIGMVNNKTGGLLRIGIKLMMA 189 Query: 183 IAGVQNSVRQALKSYGMNL-GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +A SV +NL G+ FQ+ DD+L+ K ED GK + PV+ Sbjct: 190 MATTNVSVNYVPL---VNLIGVYFQIRDDLLNLSSINYSTNKGFAEDLTEGKFSFPVVHG 246 Query: 242 FQRGTKREK 250 + T+ + Sbjct: 247 IWKDTENRQ 255 >gi|330835268|ref|YP_004409996.1| polyprenyl synthetase [Metallosphaera cuprina Ar-4] gi|329567407|gb|AEB95512.1| polyprenyl synthetase [Metallosphaera cuprina Ar-4] Length = 282 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 8/176 (4%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 I GKR R L L N A A E +H+A+L DD+VD LRRG AA Sbjct: 37 IMRDGKRFRGTLMFLFNGALGGEEKNAYPGALATEILHSASLALDDIVDYDELRRGMKAA 96 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 V+ N+ + V ++L+ A +I ++AL+ + A G L K++ Sbjct: 97 WAVYTNRKVIFVSNYLIPTALN-IISGYGEKALKISVDLWKDTAVGAL------KDMYGK 149 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 ++DY+ ++ KTA LF ++S +G + + L G NLGI +Q+VDD +D Sbjct: 150 DDDYVRTVELKTASLFKLPAMLASFSSG-KIELLDTLMEIGKNLGIIYQIVDDYVD 204 >gi|91076666|ref|XP_971444.1| PREDICTED: similar to AGAP006894-PA [Tribolium castaneum] gi|270002646|gb|EEZ99093.1| hypothetical protein TcasGA2_TC004978 [Tribolium castaneum] Length = 307 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 6/221 (2%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C D +++ Y++ + GK +R L A L + + +E +H A+LL DD Sbjct: 19 CQDEKLLQPFT-YIMQTPGKNIRSKLARAFNYWLNISEEKLKAIEEIVEMMHNASLLLDD 77 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 + D+S LRRG A ++G +++ ++++ A V+E EA+ + L G Sbjct: 78 IQDNSILRRGVPVAHSIYGVPSTINAANYVIFIALQRVLELNHPEAVSVYTQQVLELHRG 137 Query: 144 ELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + ++ + TE++Y + KT LF A+ + L + +N K G+ LG Sbjct: 138 QGMEIYWRDSYTCPTEDEYKQMTIRKTGGLFMLAIRLMQLFS--ENKADYT-KLTGI-LG 193 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + FQ+ DD L+ + + K+ ED GK + P+I A Sbjct: 194 LFFQIRDDFLNLYSKDYMLHKSYCEDLTEGKFSFPIIHAIH 234 >gi|332236282|ref|XP_003267333.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1 [Nomascus leucogenys] gi|332236284|ref|XP_003267334.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2 [Nomascus leucogenys] gi|332236286|ref|XP_003267335.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3 [Nomascus leucogenys] gi|332236288|ref|XP_003267336.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4 [Nomascus leucogenys] Length = 300 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + N Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|325479330|gb|EGC82426.1| putative geranyltranstransferase [Anaerococcus prevotii ACS-065-V-Col13] Length = 274 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 93/193 (48%), Gaps = 20/193 (10%) Query: 42 GKRLRPMLTLAT-ALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAAR 98 GKR+R L L T L L+ N L A AIE I +L+H +DD RRGK + Sbjct: 41 GKRVRATLFLETRKLSLKEISKNDFLFALAIEMIQAYSLVHDDLPAMDDDDYRRGKESVH 100 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEA---------LEALSLVACTLAEGELRQLS 149 +G +L GD LL++A +++E + LE + L + EG++ L Sbjct: 101 KHFGEDLGILTGDALLNEASKIIMEVSLNDPSYLSAGVYLLEKVGL--SGMIEGQILDLR 158 Query: 150 LSKNLDVTEEDYL-HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 N D +D+L V KTA F A + L+ G + +L++Y LG+ FQL Sbjct: 159 RRNNYD---KDFLIEVYDKKTADFFKACTVAAGLVNGFSDQEIMSLENYAYYLGLGFQLQ 215 Query: 209 DDVL--DYRGEVN 219 DD+L DY E+N Sbjct: 216 DDLLEEDYGDEIN 228 >gi|146284189|ref|YP_001174342.1| geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri A1501] gi|145572394|gb|ABP81500.1| Geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri A1501] Length = 296 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 18/217 (8%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+++ + ++ + GKRLRP+L L L+ + ACA+E IH A+L DD+ Sbjct: 36 SELDTVTQALREGTLAPGKRLRPLLLLLALGDLDADPAIGLDPACALEMIHAASLFLDDM 95 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--------ALEALS 134 +D+++LRRG+ L +G +VL LLS A+ + S AL A + Sbjct: 96 PCMDNASLRRGQPTIHLRFGEDVAVLASVALLSHAYGITAMAPSLSPRQRNDAVALLARA 155 Query: 135 LVACTLAEGELRQL---SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + A L G+ R L S+ LD + + KT LF+AALE+++L+ G ++ Sbjct: 156 VGAQGLVRGQFRDLHGTGQSQQLDAV----IATNQLKTGSLFTAALELAALLVGADRALT 211 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 L+ + LG+AFQL+DD+ D + GK+ +D Sbjct: 212 AHLRGFASELGMAFQLLDDIADGLSP-EQTGKDCQQD 247 >gi|88706667|ref|ZP_01104370.1| geranylgeranyl pyrophosphate synthetase [Congregibacter litoralis KT71] gi|88699163|gb|EAQ96279.1| geranylgeranyl pyrophosphate synthetase [Congregibacter litoralis KT71] Length = 290 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 22/227 (9%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHV-------LLACAIEFIHTATLLHDDVV- 85 + + +F GG R+RP L LA AL NH A ++E +H A+L+HDD+ Sbjct: 32 LHHSVFPGGARVRPKLCLAVALA------NHCDAPALAAAAAASVELLHCASLVHDDMPC 85 Query: 86 -DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 D++ RRG+ + +G ++L GD L+ AF ++ + A LS + +AEG Sbjct: 86 FDNADERRGRQSVHTAYGEPIALLAGDALIVSAFALLARPQ-LPAKNRLSQLMRVVAEGV 144 Query: 145 LRQLSLSKNLDVTEEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 ++ E + V ++KT LF + ++ A K G + Sbjct: 145 GAPCGIAAGQAWESEPVVDVSLYHRAKTGALF---IAATAAGAAAAGVDVAPWKLLGAKI 201 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 G A+Q+ DD+ D ++GK G D +P+ L + T R Sbjct: 202 GEAYQVADDIQDATSTPEQLGKPCGVDVALNRPSAVSELGLEGATHR 248 >gi|299115991|emb|CBN75992.1| conserved unknown protein [Ectocarpus siliculosus] Length = 338 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 17/287 (5%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +R L A + L+ + + + +H A+LL DD+ D+S LRRG A ++ Sbjct: 35 GKDVRGKLIDAFQIWLDIPAERIDAIKEVVGMLHNASLLVDDIEDNSKLRRGVPVAHSIY 94 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-LSLSKNLDVTEED 160 G +++ +++ QA + ALE L G+ R L N TEE+ Sbjct: 95 GVASTINTANYVYFQALERTHALGNSRALETFVHEQLNLHRGQGRDILWRDSNRCPTEEE 154 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM---NLGIAFQLVDDVLDYRGE 217 Y ++ KT LF A+ G+ + Q ++Y L + FQ+ DD+++ Sbjct: 155 YESMVLDKTGGLFRLAV-------GLMQAFSQDQRNYTPLLDQLALYFQIRDDLINLSSP 207 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTINDGKISVENLKKAFIIMR 275 GK+ ED GK + P+I + + N K D V+ K A + M+ Sbjct: 208 EYMKGKSFCEDLTEGKFSFPIIHCVRAKPNDHRLLNILKQRTED----VDVKKHAVVWMK 263 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 + + V T +R S + + ++ L L+E +D L+ L+ Sbjct: 264 QAGSFVYTRHRLVSLKESIAEGIQLLGGHLGLSRLIEGLDRQLEGLD 310 >gi|291402146|ref|XP_002717392.1| PREDICTED: geranylgeranyl diphosphate synthase 1 [Oryctolagus cuniculus] Length = 300 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + N Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|188582094|ref|YP_001925539.1| polyprenyl synthetase [Methylobacterium populi BJ001] gi|179345592|gb|ACB81004.1| Polyprenyl synthetase [Methylobacterium populi BJ001] Length = 288 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 8/216 (3%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVV--DDS 88 + ++Y +F GG R+RP L +A AL + A AIE +H A+L+HDD+ DD+ Sbjct: 29 EAIRYAVFPGGHRIRPRLCVAVALACGDDDPAASDAAAGAIELLHCASLVHDDLPCFDDA 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-CTLAEGELRQ 147 A RR K + +G +VL GD L+ AF + ++ +LV A G Sbjct: 89 ATRRQKPSVHAAFGVPLAVLTGDALIVAAFETLARGAARSPARLAALVGLVARAVGSPSG 148 Query: 148 LSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + + D + ++KT LF+AA + AG + L G LG A+Q Sbjct: 149 IVAGQAWESEPHVDLVEYQQAKTGALFAAATVAGAAAAGAPPLPWRLL---GECLGEAYQ 205 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + DD+ D E+GK G D G+P +L Sbjct: 206 VADDLRDVACRQEEIGKPAGRDATLGRPNAAALLGM 241 >gi|294942867|ref|XP_002783701.1| hexaprenyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC 50983] gi|239896273|gb|EER15497.1| hexaprenyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC 50983] Length = 223 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 28/229 (12%) Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 ++GNQ +V GDF++S + + ++ L +G R + +S + + Sbjct: 1 LYGNQQAVWTGDFIISVMIGCLSKINEPRVTARIASSMQNLVKGAYRPVGVSAAVRPHFK 60 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL----DYR 215 Y+ KTA LF++A+E +++A + ++ A +G++ G+ FQ+ DD+L D Sbjct: 61 RYILKSFYKTASLFASAMECVAILADLPPALVSACYLFGVHFGLEFQIRDDMLDVEMDVE 120 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILA----------FQRGTKREKNFWKSTINDGKISVE 265 G +GK G D NG+ T P + A +RG K E D ++++E Sbjct: 121 GSSGSLGKPKGTDLLNGQATAPFLFACDDDPSLLSLVERGFKGE--------GDAEMALE 172 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 L+ R +AL + + KA L LPD +++L+++ Sbjct: 173 ALQ------RNGKALQRAKLLVGYHASKAIGCLLQLPDCDARQALIDLT 215 >gi|254475094|ref|ZP_05088480.1| polyprenyl synthetase [Ruegeria sp. R11] gi|214029337|gb|EEB70172.1| polyprenyl synthetase [Ruegeria sp. R11] Length = 294 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 18/259 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y I +GGK LR L L +A + D + A AIE IH +L+HDD+ L Sbjct: 40 AMRYAI-TGGKMLRGFLVLESARLHGVDDDAALEAALAIECIHAYSLVHDDLPCMDDDDL 98 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGEL---R 146 RRG+ W +VL GD L + AF ++ + K AL + +A + + + + Sbjct: 99 RRGQPTVHKKWDEAMAVLAGDSLQTFAFELLADPKIGPHALVLIRGLAQSSGKDGMVSGQ 158 Query: 147 QLSLSKNLDVTEEDYLHVIK---SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 L ++ T D + + KT L S + +++AG + L+ Y LG+ Sbjct: 159 MLDIAAETATTPLDLDQITRLQNRKTGCLISWSATAGAVMAGADEA---PLRRYADALGL 215 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS---TINDG 260 AFQ+ DD+LD G+ ++GK + +D GK T +L R + + ++ Sbjct: 216 AFQIADDILDVEGDAAKVGKAVRKDADAGKATFVSLLGLDAAKDRARTLMEQACDALSPY 275 Query: 261 KISVENLKKA--FIIMREN 277 + E LK+A F+I R++ Sbjct: 276 GSAAETLKEAARFVISRDS 294 >gi|126306988|ref|XP_001368888.1| PREDICTED: similar to Geranylgeranyl diphosphate synthase 1 [Monodelphis domestica] Length = 299 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 5/211 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + +YL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LR Sbjct: 14 EPYRYLLQLPGKQVRTKLSQAFNHWLKVPEDKTQIIIEVTEMLHNASLLIDDIEDNSKLR 73 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG A ++G + + +++ V+ +A++ + L +G+ + Sbjct: 74 RGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQLLELHQGQGLDIYWR 133 Query: 152 KNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 N TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD Sbjct: 134 DNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSNYKEDLKPLLDT----LGLFFQIRDD 189 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + K+ ED GK + P I A Sbjct: 190 YANLHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|114049915|emb|CAK50932.1| putative polyprenyl synthetase [Streptomyces ambofaciens] gi|114050137|emb|CAK51170.1| putative polyprenyl synthetase [Streptomyces ambofaciens] Length = 362 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 22/229 (9%) Query: 41 GGKRLR-PMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGKRLR ML A L+ A +E + T L+HDD++DD +RRG + Sbjct: 60 GGKRLRVAMLYEAARLVTPDPVPGLEEAALGVELLQTHGLVHDDIIDDGPVRRGGPSTYY 119 Query: 100 VWGNQ----------TSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTLAEGE 144 + Q +VL GD L + +++++ + + + LS A + G+ Sbjct: 120 AYREQFPDRPQDALGLAVLAGDLALVLSLRVLLDSPAPPSARHAMVGVLSAAASAMIAGQ 179 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFS--AALEVSSLIAGVQNSVRQA-LKSYGMNL 201 + + + E+ LH + +S A +++ L AG + A L+ Y + Sbjct: 180 ITDIERDFT-HLPSEELLHAVSDYKTAHYSILAPVQLGLLAAGEDPARFDAELRRYARLV 238 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP--TLPVILAFQRGTKR 248 GI + DD LD G+ MGK+ G D R+GK T+ +LA GT+R Sbjct: 239 GIYETMRDDYLDLFGDARTMGKSTGSDLRDGKRSYTITAVLAAVNGTER 287 >gi|297562409|ref|YP_003681383.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846857|gb|ADH68877.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 350 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 89/317 (28%), Positives = 137/317 (43%), Gaps = 46/317 (14%) Query: 23 ICSDVEMIPDVVKYL--IFSGGKRLRPMLTLATALMLEYRG------DNHVLLACAIEFI 74 + D +++P V + L +GGKRLR A+ +R D V A A+E + Sbjct: 30 VAIDADLLP-VAEQLDVALTGGKRLR-----ASFCYWGWRAAGQPDSDALVRAAAAMELV 83 Query: 75 HTATLLHDDVVDDSALRRG----KVAARLVWGNQT---------SVLVGDFLLSQAF--- 118 H A ++HDD++D+S +R G VA R + + ++L GD L+S A Sbjct: 84 HAAAVVHDDLIDESPIRHGVPSAHVALRAAFTGRPRPHAGSRALALLTGDLLMSWAAELF 143 Query: 119 --CMVIETKSQEALEALSLVACTLAEGE-LRQLSLSKNLDVTEEDYLHVIKSKTA-VLFS 174 C + A E ++A L GE L L D L VI+ KTA Sbjct: 144 LCCGLPSAYLSRARELWLVMARELIAGECLEVLRTGSPPDTGRS--LQVIRYKTAKYTVE 201 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 L + +AG +V +A +YG+ LG AFQL DD+L G+ GK+ +D R +P Sbjct: 202 HPLRIGGALAGAPGAVMEAFTAYGLPLGEAFQLRDDLLGLFGDPELTGKSNLDDVRGNRP 261 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA------LVDTEYRAY 288 T+ + + T E+ + + + E L + IMR A ++D RA Sbjct: 262 TVLLAETWAAATAAERRELRGLLGRRDLEGEGLSRVRSIMRRTGAPERVEEMIDERVRAA 321 Query: 289 SYGQKAKDSLRCLPDSS 305 + D LPD + Sbjct: 322 TDALDRAD----LPDGA 334 >gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] Length = 326 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%) Query: 32 DVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VD 86 + ++Y + G KR P++ +A + + GD ACA+E +H A+L+HDD+ +D Sbjct: 76 EAMRYSVLPQGPKRAPPVMCVAACEL--FGGDRLAAFPTACALEMVHAASLIHDDLPCMD 133 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----------ALSL 135 D +RRGK + V+G+ ++L GD L AF ++ + + A ++ Sbjct: 134 DDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTV 193 Query: 136 VACTLAEGELRQLSLSK-NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + +A G+ L L +E + +AV L+ G Q+L Sbjct: 194 GSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAV-------CGGLLGGATEDELQSL 246 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 + YG +G+ +Q+VDD+ + + + + G G Sbjct: 247 RRYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278 >gi|8272410|dbj|BAA96457.1| farnesyl diphosphate synthase [Rhodobacter sphaeroides] Length = 256 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 15/230 (6%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LR 91 ++Y + GGKRLR L L +A + + V A +IE +H +L+HDD+ LR Sbjct: 1 MRYAV-QGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLR 59 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG W T+VL GD L + AF ++ + A + LVA + L Sbjct: 60 RGLPTVHRKWDECTAVLAGDALQTLAFELLADPALGPAAVRIELVASLAKASGAEGMVLG 119 Query: 152 KNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + LD+ E H+ KT L + E +++ + R L+ Y LG Sbjct: 120 QALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAILG---QADRVPLRRYATALG 176 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +AFQ+ DD+LD G+ + GK + +D GK T +L R + Sbjct: 177 LAFQIADDILDVEGDAEKAGKRLQKDAEAGKATFVSLLGLDGAKARARAL 226 >gi|170044368|ref|XP_001849822.1| trans-prenyltransferase [Culex quinquefasciatus] gi|167867554|gb|EDS30937.1| trans-prenyltransferase [Culex quinquefasciatus] Length = 205 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 5/183 (2%) Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 L +GE QL + + Y KTA L + +L+ ++++G + + YG Sbjct: 28 LVQGEFMQLGSKETENERFAHYFTKTYRKTASLIANSLKAVAVLSGADEQMVELSFQYGR 87 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 NLG+AFQ VDD+LD+ MGK D + G T PV+ A ++ + + Sbjct: 88 NLGLAFQFVDDLLDFVSSSEAMGKPAAADLKLGLATAPVLFACEKFPELNPMILRRFREP 147 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 G ++++A+ ++ +++ L T + A + +A + +S ++K L+ V DF L Sbjct: 148 G-----DVERAYELVHKSQGLGQTRFLARKHCIEALRLASQIAESPYQKGLIVVGDFVLN 202 Query: 320 RLN 322 R+ Sbjct: 203 RMK 205 >gi|154335826|ref|XP_001564149.1| polyprenyl synthase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061183|emb|CAM38205.1| putative polyprenyl synthase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 742 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%) Query: 34 VKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 V+ +I GGK R ++ + AL +Y D +A A E +H +L+ DD+ D+S +R Sbjct: 439 VRSMIDRGGKSWRSLVLVSCCNALSRQYF-DCRRYIAVA-ELLHVGSLIIDDIQDNSMVR 496 Query: 92 RGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RG+ + +G T++ G + ++ + + ++A L L G Q Sbjct: 497 RGEKCVHVEYGVATAINAGSACYFMAPRAARIQDLPPEKASRIYQLYFDVLLAGHAGQ-- 554 Query: 150 LSKNLDVTEEDYL--------------------HVIKSKTAVLFSAALEVSSLIAGVQNS 189 LD+ DYL H K+ AV A+ + ++ + Sbjct: 555 ---GLDIYGLDYLMPKVIETGDVSTLFDALDAIHTYKTGGAVGTLCAM--ACVLCEAPAA 609 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR-GTKR 248 + +A++ +G+ LG+AFQ+VDD L+ RG + K ED ++GK T P+ +A R G Sbjct: 610 LSEAVEKFGLTLGLAFQIVDDALNIRGFEGNL-KEAAEDIKDGKITYPIAIAMGRLGAAD 668 Query: 249 EKNFW 253 W Sbjct: 669 RHTLW 673 >gi|62959177|gb|AAY23696.1| farnesyl diphosphate synthase [Bacillus sp. JL-34] gi|62959197|gb|AAY23706.1| farnesyl diphosphate synthase [Bacillus sp. JL-29] gi|73811209|gb|AAY23723.1| farnesyl diphosphate synthase [Citromicrobium bathyomarinum JL354] Length = 145 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 10/143 (6%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-- 136 HDD+ +D+ LRRGK V+G ++L GD LLS AF V T A L ++ Sbjct: 1 HDDMPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLLQVIVR 60 Query: 137 ------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A L G++ L DV+ E + KT L + +++AG + Sbjct: 61 LGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPEE 120 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 Q L Y N+G+AFQ+VDD+LD Sbjct: 121 VQLLSRYAQNIGLAFQIVDDILD 143 >gi|62959211|gb|AAY23713.1| farnesyl diphosphate synthase [Synechococcus cf. elongatus CCMP1379] Length = 145 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 10/143 (6%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-- 136 HDD+ +D+ LRRGK V+G ++L GD LLS AF V T A L ++ Sbjct: 1 HDDMPWMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDVPAERLLQVIVR 60 Query: 137 ------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A L G++ L DV+ E + KT L + +++AG + Sbjct: 61 LGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPEE 120 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 Q L Y N+G+AFQ+VDD+LD Sbjct: 121 VQLLSRYAQNIGLAFQIVDDILD 143 >gi|221135480|ref|ZP_03561783.1| trans-hexaprenyltranstransferase [Glaciecola sp. HTCC2999] Length = 115 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 1/111 (0%) Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 + DY + NEMGKN+G+D GKPTLP++ A + + I DG +E+L Sbjct: 5 ISDYTADANEMGKNVGDDLAEGKPTLPLLHAMWHSDTQTSELIANAITDGD-GLEHLPTI 63 Query: 271 FIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 M+ ++ T+ +A Q+A D+L +P+S +K +L+ + ++R+ Sbjct: 64 LTAMKNVGSIEYTQEKAQLEAQRAIDALSAIPESQYKDALIGLAHLSVERV 114 >gi|62959179|gb|AAY23697.1| farnesyl diphosphate synthase [Bacillus sp. JL-39] gi|62959189|gb|AAY23702.1| farnesyl diphosphate synthase [Kocuria sp. JL-51] gi|62959199|gb|AAY23707.1| farnesyl diphosphate synthase [Rhodococcus sp. JL-61] gi|73811207|gb|AAY23722.1| farnesyl diphosphate synthase [Sagittula sp. JL-351] Length = 145 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 10/143 (6%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-- 136 HDD+ +D+ LRRGK V+G ++L GD LLS AF V T A L ++ Sbjct: 1 HDDLPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLLQVIVR 60 Query: 137 ------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A L G++ L DV+ E + KT L + +++AG + Sbjct: 61 LGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPEE 120 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 Q L Y N+G+AFQ+VDD+LD Sbjct: 121 VQLLSRYAQNIGLAFQIVDDILD 143 >gi|62959193|gb|AAY23704.1| farnesyl diphosphate synthase [Exiguobacterium sp. JL-25] Length = 145 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 10/143 (6%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-- 136 HDD+ +D+ LRRGK V+G ++L GD LLS AF V T A L ++ Sbjct: 1 HDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLLQVIVR 60 Query: 137 ------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A L G++ L DV+ E + KT L + +++AG + Sbjct: 61 LGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTTGAVLAGAKPEE 120 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 Q L Y N+G+AFQ+VDD+LD Sbjct: 121 VQLLSRYAQNIGLAFQIVDDILD 143 >gi|322796024|gb|EFZ18648.1| hypothetical protein SINV_14286 [Solenopsis invicta] Length = 182 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 5/182 (2%) Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 L +GE QL + + YL KTA L + ++ ++++ V + + YG Sbjct: 5 LVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKAVAILSEVDDRTIEMAFQYGR 64 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 N+G+AFQLVDD+LD+ + MGK D + G T PV+ A ++ + + Sbjct: 65 NVGLAFQLVDDLLDFVASSSAMGKPTAADLKLGLATAPVLFACEQYPELNAMIMRRFQEP 124 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 G +++KAF ++ ++ L T + A + +A + S ++++L+ + D + Sbjct: 125 G-----DVEKAFDLVHKSNGLEQTRFLAKKHCVEANKIAQSFTKSPYQRALIHMTDLVIN 179 Query: 320 RL 321 R+ Sbjct: 180 RM 181 >gi|322490435|emb|CBZ25694.1| putative polyprenyl synthase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 742 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 37/247 (14%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATL 79 +IC E + V+ +I GGK R ++ + AL +Y D +A A E +H +L Sbjct: 430 KIC---ETLFRPVRSIIDRGGKSWRSLIFVSCCNALSRQYF-DCSRYIAVA-ELLHVGSL 484 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVA 137 + DD+ D+S +RRG + +G T++ G + + + + ++A L Sbjct: 485 IIDDIQDNSVVRRGGKCVHVEYGVATAINAGSACYFMGPRAARIQDLPPEKASRIYKLYF 544 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYL--------------------HVIKSKTAVLFSAAL 177 L G Q LD+ DYL H K+ AV A Sbjct: 545 DVLLAGHAGQ-----GLDIYRLDYLMPKVVETGDTSTLVDALDAIHTYKTGAAV--GALC 597 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ ++ + +A++ +G+ LG+AFQ+VDD L+ RG ++ K ED ++GK T P Sbjct: 598 SMACVLCETPTVLSEAMERFGLTLGLAFQIVDDALNIRGFEGDL-KEEAEDIKDGKITYP 656 Query: 238 VILAFQR 244 + +A R Sbjct: 657 IAIAMGR 663 >gi|121701357|ref|XP_001268943.1| geranylgeranyl diphosphate synthase [Aspergillus clavatus NRRL 1] gi|119397086|gb|EAW07517.1| geranylgeranyl diphosphate synthase [Aspergillus clavatus NRRL 1] Length = 372 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 5/216 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK +R L A + L+ D+ ++ + +HTA+LL DDV D+S LRRG Sbjct: 74 YMQQHPGKDIRRQLINAFNVWLQVPPDSLAIITKVVGMLHTASLLIDDVEDNSVLRRGIP 133 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + + A++ L G+ L L Sbjct: 134 VAHNIFGTAQTINSANYVYFLALQEVQKLNNPTAIDIYVQELLNLHRGQGMDLFWRDTLT 193 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEE+YL ++ +KT LF A++ L+ + + +K + +G+ FQ+ DD L+ Sbjct: 194 CPTEEEYLEMVGNKTGGLFRLAIK---LMQAESTAGKDCVKLVNV-MGLTFQICDDYLNL 249 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 K + ED GK + P+I + + + + Sbjct: 250 SSTTYTKNKGLCEDLTEGKFSFPIIHSIRSNPRNHQ 285 >gi|62959239|gb|AAY23727.1| farnesyl diphosphate synthase [Nocardia sp. JL-538] Length = 145 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 10/143 (6%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-- 136 HDD+ +D+ LRRGK V+G ++L GD LLS AF V T A L ++ Sbjct: 1 HDDLPSMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLLQVIVR 60 Query: 137 ------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A L G++ L DV+ E + KT L + +++AG + Sbjct: 61 LGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPEE 120 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 Q L Y N+G+AFQ+VDD+LD Sbjct: 121 VQLLSRYAQNIGLAFQIVDDILD 143 >gi|302538600|ref|ZP_07290942.1| predicted protein [Streptomyces sp. C] gi|302447495|gb|EFL19311.1| predicted protein [Streptomyces sp. C] Length = 355 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 24/223 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG----DNHVLLACAIEFIHTATLLHDDVVDD 87 D+V+ + GGKRLR +L A ++ G D A +IE + T L+HDD++DD Sbjct: 44 DLVRDMSLRGGKRLRVVLLYEAAALVADDGLAGLDE---AAISIELLQTHGLIHDDIIDD 100 Query: 88 SALRRGK----VAARLVWGNQTSVLVGDFLLSQAFCM-----VIETKSQEALEALSLVAC 138 + +RRG A R + +Q + LL+ V+ T A AL++ A Sbjct: 101 APVRRGGPSTYYAYRHEFPDQPDTALALALLAGDLAAFLSLRVLLTSGLPADRALAMAAV 160 Query: 139 TLAEGEL----RQLSLSKNLDVTEE-DYLHVIKSKTAVLFS--AALEVSSLIAGVQNSVR 191 G + + L ++ D+LH + + +S A L + L AG ++ Sbjct: 161 HADTGAATMTGQMIDLERDFHPAPGIDFLHAVTEFKSTRYSVLAPLRMGLLAAGADHTPY 220 Query: 192 QA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 A L+ Y LGIA Q+ DD LD G+ +GK +G D R+G+ Sbjct: 221 DAELRRYATALGIANQIHDDWLDLFGDPAALGKPVGSDIRSGR 263 >gi|229820403|ref|YP_002881929.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333] gi|229566316|gb|ACQ80167.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333] Length = 362 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 31/272 (11%) Query: 40 SGGKRLRPMLTLAT----ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 +GGKRLR +L A + GD VL A+E A L+HDDV+D S +RRG Sbjct: 48 TGGKRLRALLCCAAWEAAGGAVPSAGDPVVLAGAALELFQAAALVHDDVMDASDVRRGAP 107 Query: 96 AA--RLVWGNQTSVLVGD---------------------FLLSQAFCMVIETKSQEALEA 132 AA RL ++ + L+GD ++A +V ++ A E Sbjct: 108 AAHRRLAAEHRAAGLLGDADRFGEAGAILLGDLLLMLSSSTFARAVRLVPLERAARADEV 167 Query: 133 LSLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSA--ALEVSSLIAGVQN 188 + ++ + G+ + +L+ + D + A +S L + + +AG + Sbjct: 168 YAHMSGEVTLGQYLDVYAALAPWDPAGDADRARRVIEAKAARYSVEHPLVLGAALAGADD 227 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 V G+ +G AFQL DDVL G+ GK G+D R GK T+ + L + Sbjct: 228 DVLAWCSRVGLPVGTAFQLRDDVLGVFGDPAVTGKPAGDDLREGKRTVLLALGLELADDA 287 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRAL 280 + + +S + D + + + + I+ + AL Sbjct: 288 DADDLRSAVGDQGLDADGVARLRGILTSSGAL 319 >gi|162452480|ref|YP_001614847.1| geranyltranstransferase [Sorangium cellulosum 'So ce 56'] gi|161163062|emb|CAN94367.1| Geranyltranstransferase [Sorangium cellulosum 'So ce 56'] Length = 370 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 106/247 (42%), Gaps = 33/247 (13%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-------DNHVLLACAIE 72 ++R +VE + + L GGKR R L L+ Y+G + A+E Sbjct: 56 VQRYGREVEAMVSEARSLTLRGGKRFRAGL-----LVAAYQGVAPDAPLGPAIDAGVALE 110 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDFLLSQAFCMVIE 123 + T L+ DD +D +RRG + G +++L GD S A + Sbjct: 111 LLQTYLLIQDDWIDGDTVRRGDRTVHVALTETLGDPHLGASSAILAGDLTWSFALSTLAG 170 Query: 124 TKSQEALE-ALSLVACTLAEGELRQLSLSKNLDVT--EEDY--LHVIKSKTAVLFSAALE 178 + A A L+ C + E + + ++LDV ED +H +K+ + + L Sbjct: 171 ADAPPATTLAAVLLFCKMHE----DVVIGQHLDVVGRAEDVEQMHALKTGSYTV-RGPLA 225 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + +AG AL+ + +G+AFQL DD+L G GK +G D R GK T Sbjct: 226 LGATLAGAPAETVAALERFAAPVGVAFQLRDDLLGTFGSAAATGKPVGNDLRAGKRT--A 283 Query: 239 ILAFQRG 245 +LA G Sbjct: 284 VLAAAEG 290 >gi|170741854|ref|YP_001770509.1| polyprenyl synthetase [Methylobacterium sp. 4-46] gi|168196128|gb|ACA18075.1| Polyprenyl synthetase [Methylobacterium sp. 4-46] Length = 290 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 22/242 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDV-- 84 ++ + ++Y +F GG R+RP L LA A + A AIE +H A+L+HDD+ Sbjct: 25 PLLAEAIRYAVFPGGHRIRPRLCLAVARACGDDDPAASDAAAAAIELLHCASLVHDDLPC 84 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--EALEAL-SLVA---- 137 DD+ +RR K + + +G ++L GD L+ AF + ++ E L L LVA Sbjct: 85 FDDAPMRRQKPSVHVAFGEPIALLAGDALIVLAFETLARGAARVPERLGTLVGLVARAVG 144 Query: 138 --CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + G+ + S L ++ +KT LF+AA + AG + + L Sbjct: 145 SPAGIVAGQAWESEPSVGLSAYQQ-------AKTGALFAAATVTGAAAAGAEAMPWRLLG 197 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKS 255 Y LG A+Q+ DD+ D E+GK +G D G+P +L +R + + Sbjct: 198 EY---LGEAYQVADDLRDVACRQEEVGKPVGRDATLGRPNAAALLGLDGALRRLADLAQE 254 Query: 256 TI 257 + Sbjct: 255 AV 256 >gi|62959169|gb|AAY23692.1| farnesyl diphosphate synthase [Erythrobacter litoralis] Length = 145 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 68/143 (47%), Gaps = 10/143 (6%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-- 136 HDD+ +D+ LRRGK V+G ++L GD LLS AF V T A L ++ Sbjct: 1 HDDMPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLLQVIVR 60 Query: 137 ------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A L G+L L D + E + KT L + +++AG + Sbjct: 61 LGQAVGAEGLVGGQLVDLESEGKTDASVETLNFIHTHKTGALLEVCVTAGAVLAGAKPEE 120 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 Q L Y N+G+AFQ+VDD+LD Sbjct: 121 VQLLSRYAQNIGLAFQIVDDILD 143 >gi|332968796|gb|EGK07844.1| geranyltranstransferase [Psychrobacter sp. 1501(2011)] Length = 315 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 32/261 (12%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG----------------DNHVLLACAIEF 73 + + Y + GKR+RP++ + Y DN A+EF Sbjct: 36 LKEACHYAMTGQGKRVRPLMAACAYHTVIYSNTAVDSGAETLSDSVLTDNCRRAMLAVEF 95 Query: 74 IHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCM----------V 121 +HT +L+HDD+ LRRG+ + + T++L GD L + AF + + Sbjct: 96 LHTYSLIHDDLPCMDDDDLRRGRPTCHIKFDEATAMLTGDVLQTLAFEILTADIEGFQPI 155 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + ++ + L + A + G++ L+ ++N ++T+ + + + KT L AA+ + Sbjct: 156 SDEQAAKLLTVFAPRARRMVSGQMLDLN-AENKEITQAELEAIHRDKTGALIEAAVLMGG 214 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + A A+ + N+G+AFQ+ DD+LD + +GK G D K T ++ Sbjct: 215 VCAEASAEQLAAMTQFATNIGLAFQVQDDILDVTASTDILGKPAGSDEGLNKSTYVRLMG 274 Query: 242 FQRGTKREKNFW---KSTIND 259 T K+ + K I+D Sbjct: 275 VDSATDYAKSLFVEAKEVIDD 295 >gi|86475810|dbj|BAE78987.1| Probable geranyl diphosphate synthase [Streptomyces sp. KO-3988] Length = 352 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 25/238 (10%) Query: 29 MIP-DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH----VLLACAIEFIHTATLLHDD 83 ++P D + LI SGGKR+RP + L GD V A+E +H + L+HDD Sbjct: 47 VVPVDALSELIASGGKRIRPAFCITG--YLAAGGDPAEPGIVAAGAALEMLHLSALVHDD 104 Query: 84 VVDDSALRRGKVAARLV----------------WGNQTSVLVGDFLLSQAFCMVIETKSQ 127 V+DDS+ RRG +G ++LVGD L + ++ E + Sbjct: 105 VLDDSSSRRGVPTVHTQAMALHESSGWQGEPRRYGEGVAILVGDLALVYSEELMAEAP-R 163 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGV 186 L + + + G+ + + V + + K+ L V + Sbjct: 164 RVLPEWNKLRSEVMIGQYMDVHAAAEFSVDPRSSRLIARIKSGRYTIHRPLVVGAKRGRG 223 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + + AL+ YG +G AFQL DD+LD E GK G DF K TL + A QR Sbjct: 224 RGDLAPALEEYGEAVGEAFQLRDDLLDASATPAETGKPTGLDFTQHKMTLLLGWAMQR 281 >gi|311742815|ref|ZP_07716623.1| polyprenyl synthetase [Aeromicrobium marinum DSM 15272] gi|311313495|gb|EFQ83404.1| polyprenyl synthetase [Aeromicrobium marinum DSM 15272] Length = 362 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 43/305 (14%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLI----FSGGKRLRPMLTLATALMLEYRG 61 DL + D V+F+ +R D P SGGKRLRP LA + Sbjct: 10 DLAVVDAALVSFVQHQRTRLDPLGPPLADLVDAAAAYVSGGKRLRPAFCLAGWRVATATP 69 Query: 62 DNH------VLLACAIEFIHTATLLHDDVVDDSALRRGK----------------VAARL 99 D+ + A ++E++ + L+HDD++D S RRG+ V Sbjct: 70 DDTPVPEAVAVAAGSLEWLQGSALVHDDLMDGSDTRRGRPSVHRDFEQRHRREAMVGDPA 129 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQE--------------ALEALSLVACTLAEGEL 145 +G T+VL+GD +LS M+ + A E L + + G+ Sbjct: 130 GFGAATAVLMGDLMLSWCDEMLRSAGHRPGPFTGADGAARLARAFEVLDVCKTEVVAGQF 189 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + + + + + V++ K A L + + + G ++ L + + LG A Sbjct: 190 LDVVNQTRPESSAAEAMLVVRYKAAKYTVERPLHLGATLGGGDQALMAGLSAVALPLGEA 249 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI--NDGKI 262 FQL DDVL G+ GK G+D R GK TL V + G + + + + +DG Sbjct: 250 FQLRDDVLGVFGDPAVTGKPSGDDLREGKRTLLVARTAELGGEPARAVLRDALGTDDGVP 309 Query: 263 SVENL 267 + +L Sbjct: 310 RIRDL 314 >gi|227499442|ref|ZP_03929553.1| possible geranyltranstransferase [Anaerococcus tetradius ATCC 35098] gi|227218504|gb|EEI83747.1| possible geranyltranstransferase [Anaerococcus tetradius ATCC 35098] Length = 275 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 10/189 (5%) Query: 41 GGKRLRPMLTLATALMLEYRGD-NHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAA 97 GKR+R L L T + + D N +L A AIE I +L+HDD+ RRGK + Sbjct: 41 AGKRIRASLFLETRRLSRNQIDKNDLLFALAIEMIQAYSLVHDDLPAMDDDDYRRGKESL 100 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA---LEALSLVACTLAEG--ELRQLSLSK 152 +G +L GD LL++A ++ E S+++ + L++ T +G E + L L + Sbjct: 101 HKHFGEDLGILTGDALLNEATKLMFEIASRDSSFIKASQYLLSKTGKDGMIEGQILDLRR 160 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + ++ + V KTA F A+ +L+ G +L+ Y LG+ FQ+ DD+L Sbjct: 161 RRNYNKDFIIEVYDKKTADFFKGAIVAGALVNGFDQDTINSLERYAYYLGLGFQIQDDLL 220 Query: 213 --DYRGEVN 219 DY E+N Sbjct: 221 EKDYGDEIN 229 >gi|149690652|ref|XP_001492882.1| PREDICTED: similar to geranylgeranyl diphosphate synthase 1 [Equus caballus] Length = 299 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +YL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 EYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ + +A++ + L +G+ + N Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLEKVLTLEHPDAVKLFTRQLLELHQGQGLDIYWRDNY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|241722226|ref|XP_002413673.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase, putative [Ixodes scapularis] gi|215507489|gb|EEC16981.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase, putative [Ixodes scapularis] Length = 182 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 5/181 (2%) Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 L +GE QL ++ Y+ KTA L + A + S++ G V++A YG Sbjct: 5 LVQGEFMQLGSKEDEGERFSHYIQKTFKKTASLIAFACKSVSILGGGDEKVQEAAYQYGR 64 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 N+GIAFQLVDD+LD+ +++GK D R G T PV+ A + + + Sbjct: 65 NVGIAFQLVDDLLDFVSSQSDLGKPAAADLRLGLATAPVLFACDKYPELNAMIMRRFSEP 124 Query: 260 GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQ 319 G ++++A+ + ++ L T A + +A L DS K++L+ + + L Sbjct: 125 G-----DVERAYDAVLKSDGLEHTRLLAQKHCSEAVRHLAPWTDSPEKQALISITEKVLN 179 Query: 320 R 320 R Sbjct: 180 R 180 >gi|3549881|emb|CAA75568.1| geranylgeranyl diphosphate synthase [Gibberella fujikuroi] Length = 342 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 3/211 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ K +R + + LE D ++ I +H ++L+ DD D+S LRRGK Sbjct: 102 YILTLPSKGIRGAFIDSLNVWLEVPEDETSVIKEVIGMLHNSSLIIDDFQDNSPLRRGKP 161 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + V+G ++ +++ +A + + +AL ++ T+ +G+ L + N Sbjct: 162 STHTVFGPAQAINTATYVIVKAIEKIQDIVGHDALADVTGTITTIFQGQAMDLWWTANAI 221 Query: 156 VTE-EDYLHVIKSKTAVLFSAALEVSSLI--AGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 V ++YL ++ KT LF +LE+ +L A + +S ++L S LG FQ+ DD + Sbjct: 222 VPSIQEYLLMVNDKTGALFRLSLELLALNSEASISDSALESLSSAVSLLGQYFQIRDDYM 281 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + K ED GK +L +I A Q Sbjct: 282 NLIDNKYTDQKGFCEDLDEGKYSLTLIHALQ 312 >gi|311113328|ref|YP_003984550.1| geranylgeranyl pyrophosphate synthase [Rothia dentocariosa ATCC 17931] gi|310944822|gb|ADP41116.1| geranylgeranyl pyrophosphate synthase [Rothia dentocariosa ATCC 17931] Length = 380 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 79/305 (25%), Positives = 132/305 (43%), Gaps = 42/305 (13%) Query: 40 SGGKRLRPMLTL------ATALMLEYRGDNHVLLA-CAIEFIHTATLLHDDVVDDSALRR 92 SGGKRLR +L+ +LE ++ A A+E +A L+HDD++D S RR Sbjct: 59 SGGKRLRALLSYWGWRGAGGDSILEGSAPAPIIRAGAALELFQSAALIHDDIIDRSDTRR 118 Query: 93 GK----------------VAARLVWGNQTSVLVGDFLLS---QAFCMVIET--KSQEALE 131 GK V +G ++ GD LS Q F + E EA Sbjct: 119 GKPSVHKKFETQHIQNSWVGDTFNYGLTGGIIAGDLCLSWSEQMFSSIGEGALSGTEARN 178 Query: 132 ALSLVACTLAEGELRQLSLSKNLDV-TEEDYL----HVIKSKTA-------VLFSAALEV 179 + + G+ + LS+ + T E+ L VI+ K+A ++ AL + Sbjct: 179 IFDTMRTEVMAGQYLDV-LSEVIPAETPENALARAHRVIQYKSAKYSCEHPLVLGGALAL 237 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++ IA + + +++G+ LG FQL DD L GE + GK G+D R GK T+ + Sbjct: 238 TA-IAHQDHPILGKYRAFGLPLGEGFQLRDDELGVFGEPSATGKPAGDDIREGKRTVLIA 296 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 L Q + ++ + + + +++ + + K +M + AL E + +L Sbjct: 297 LTTQNISAEDRRMLEGALGNPELTNQQISKIRELMIGSGALEHVEELIAQKSEAVDTALH 356 Query: 300 CLPDS 304 LP S Sbjct: 357 ALPVS 361 >gi|262202925|ref|YP_003274133.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247] gi|262086272|gb|ACY22240.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247] Length = 376 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 72/275 (26%), Positives = 112/275 (40%), Gaps = 40/275 (14%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLA---------TALMLEY 59 L++ + + I V +VV+ + GGKR+RP+ A A Sbjct: 22 LREFFAAALPVAEAISPAVGAAAEVVRDFVLQGGKRIRPVFVYAGWRCGISARAAGADAA 81 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL---------VW-------GN 103 + + + A+E + L+HDD++D S RRG+ W G Sbjct: 82 EAADTLRVCAALELVQACALIHDDIIDRSDTRRGRPTVHRDFEHRHRDRQWSGDPGGFGV 141 Query: 104 QTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 ++L GD L+ A +V +A + V T A L + LD+ Sbjct: 142 AAAILAGDLALAWADDLVHGLAPGAAPDDDATPLPAPVGATWASMRTEVLG-GQYLDIVN 200 Query: 159 EDY--------LHVIKSKTAVLFSA-ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 E V++ KTA A LE+ + +AG + L+S G +LGIAFQL D Sbjct: 201 EAAGDESVQAAYQVMEYKTAAYTVARPLELGARMAGAPADLIADLRSVGHDLGIAFQLRD 260 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 D+L G+ GK G+D +GK T + A +R Sbjct: 261 DLLGVFGDPARTGKPSGDDLISGKRTALLATALRR 295 >gi|146303474|ref|YP_001190790.1| polyprenyl synthetase [Metallosphaera sedula DSM 5348] gi|145701724|gb|ABP94866.1| Polyprenyl synthetase [Metallosphaera sedula DSM 5348] Length = 279 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 8/176 (4%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 I GKR R L L + A A E +H+A+L DD+VD +RRG AA Sbjct: 34 IMRDGKRFRGTLMFLFNGALGGEEKDAYPGALATEILHSASLALDDIVDYDEIRRGMKAA 93 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 V+ N+ + V ++L+ A +I +AL + A G L K++ Sbjct: 94 WAVYTNRKVIFVSNYLIPTALS-IISGYGDKALRISVDLWKDTAVGAL------KDMYGK 146 Query: 158 EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 +EDY+ I+ KTA LF +SS +G ++ L G +LGI +QL+DD +D Sbjct: 147 DEDYVRTIELKTASLFKLPTMLSSFSSG-RSEFLDTLMEAGKDLGIIYQLIDDYVD 201 >gi|11066676|gb|AAG28699.1|AF272737_2 CrtE [Streptomyces griseus subsp. griseus NBRC 13350] Length = 425 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 86/292 (29%), Positives = 117/292 (40%), Gaps = 49/292 (16%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRR 92 V GGKR+RP L L L A+E I + L+HDDV+D S LRR Sbjct: 76 VADFTLDGGKRVRPRLLWWGMRSCGAADTTAALRLGVALELIQSCALIHDDVMDRSRLRR 135 Query: 93 GKVAARL----------------VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 GK A + +G +VL GD L+ A V ET ALS V Sbjct: 136 GKPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDLALAWADDTVAET-------ALSAV 188 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-----------KTAVLFSAALEVS----- 180 + L + ++ YL + +TA L SA+ V Sbjct: 189 QRR----RIGPLWRTMRTEMVAGQYLDLRGQVRGGSSVEQALRTACLKSASYSVERPLAL 244 Query: 181 -SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT--LP 237 + +AG + AL+S G GIAFQL DD+L G+ GK G+D R GK T LP Sbjct: 245 GAALAGADEATTDALRSAGRCAGIAFQLRDDLLGVFGDPELTGKPSGDDIREGKSTYLLP 304 Query: 238 VI--LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287 V A G K+ G ++ E+L + ++ E A E +A Sbjct: 305 VARRWAEPAGNKQSLAVLGRFPGGGNLAKEDLPEVRGVLEETGARAHVERKA 356 >gi|37528167|ref|NP_931512.1| hypothetical protein plu4337 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787604|emb|CAE16709.1| crtE [Photorhabdus luminescens subsp. laumondii TTO1] Length = 300 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 113/205 (55%), Gaps = 29/205 (14%) Query: 42 GKRLRPMLTLATALMLEYRGDN-----HVLLACAIEFIHTATLLHDDV--VDDSALRRGK 94 GKR+RP+L L L L G+N + LA AIE +H A+L+ DD+ +D++ RRG+ Sbjct: 51 GKRIRPLLLLLIVLDL---GENPWKTDFLQLASAIEIVHAASLILDDLPCMDNAEYRRGR 107 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--ALEALSLVACT-----LAEGELRQ 147 A +G ++L LLS+AF +++ET E A+++++ T L +G+ R Sbjct: 108 PAIHRQYGESVAILAAVALLSRAFGLIVETNLSEYDKSAAVAILSHTVGLNGLVQGQFRD 167 Query: 148 LSLSKNLDVTEEDYLHVIKS----KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 L N + +Y H I + KT +LF +++++ + +RQAL+ +LG Sbjct: 168 L----NNTLCAGNY-HAIATTNDLKTGLLFDTTFQLAAIAVNAPDIIRQALRHVSQHLGQ 222 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGED 228 AFQL+DD+ D ++N GK++ +D Sbjct: 223 AFQLLDDLSD---DLNNTGKDMYQD 244 >gi|62959221|gb|AAY23718.1| farnesyl diphosphate synthase [Synechococcus elongatus CCMP1630] Length = 145 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 10/143 (6%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-- 136 HDD+ +D+ LRRGK V+G ++L GD LLS AF V T A L ++ Sbjct: 1 HDDMPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLLQVIVR 60 Query: 137 ------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A L G++ L DV+ E + KT L + +++AG + Sbjct: 61 LGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALPEVCVTAGAVLAGAKPEE 120 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 Q L Y N+G+AFQ+VDD+LD Sbjct: 121 VQLLSRYAQNIGLAFQIVDDILD 143 >gi|156044020|ref|XP_001588566.1| hypothetical protein SS1G_10113 [Sclerotinia sclerotiorum 1980] gi|154694502|gb|EDN94240.1| hypothetical protein SS1G_10113 [Sclerotinia sclerotiorum 1980 UF-70] Length = 378 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 21/213 (9%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL GK +R L A LE ++ ++ + +HTA+LL DDV D S LRRG Sbjct: 99 YLEAHPGKDIRKQLIAAFNEWLEVPPESLEVITKVVGMLHTASLLVDDVEDSSLLRRGLP 158 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ FC + E + +A+ T+ EL L + +D Sbjct: 159 VAHSIFGTAQTINSANYVY---FCALQELQKLNNPQAI-----TIYTEELLNLHRGQGMD 210 Query: 156 V---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + TE+DYL ++ +KT LF A++ L+ + R + + +GI FQ Sbjct: 211 LFWRDSLTCPTEDDYLEMVGNKTGGLFRLAVK---LMQAESKTSRDCVPLVNL-IGIIFQ 266 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + DD + K + ED GK + P+I Sbjct: 267 IRDDYQNLSSPEYSQNKGLCEDLTEGKFSFPII 299 >gi|156974446|ref|YP_001445353.1| hypothetical protein VIBHAR_02161 [Vibrio harveyi ATCC BAA-1116] gi|156526040|gb|ABU71126.1| hypothetical protein VIBHAR_02161 [Vibrio harveyi ATCC BAA-1116] Length = 236 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 90/164 (54%), Gaps = 7/164 (4%) Query: 54 ALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113 +L L ++ + LA A+E +H A+L+HDD+ D +LRRG+ A + +G ++ GD+L Sbjct: 2 SLCLGLNDEDAMRLASAVELLHNASLIHDDIQDGDSLRRGQSAVWVKFGTNVAICTGDYL 61 Query: 114 LSQAFCMVIETKS----QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169 +++AF ++ S + LEA EG+ L+ ++ ++ ++Y + + K Sbjct: 62 IARAFGILANISSPNVLPQLLEATQNAVSVTVEGQNADLTAKEH--ISPQNYESIAEKKA 119 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 L + +LE+ + +G N + A + +L IA+Q++DD+ D Sbjct: 120 GPLLALSLELPLISSGRLNEIPTA-RHAASSLAIAYQILDDIKD 162 >gi|207347806|gb|EDZ73868.1| YBR003Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 256 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 47/79 (59%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTA+LLHDDV+D S RRG+ + + N+ +VL GDFLL +A + + Sbjct: 178 LAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNTAFTNKMAVLAGDFLLGRATVSISRLHN 237 Query: 127 QEALEALSLVACTLAEGEL 145 E +E +S L EGE Sbjct: 238 PEVVELMSNSIANLVEGEF 256 >gi|51469024|emb|CAH18006.1| geranylgeranyl diphosphate synthase [Gibberella intermedia] Length = 343 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 3/211 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ K +R + + LE D ++ I +H ++L+ DD D+S LRRGK Sbjct: 102 YILTLPSKGIRGAFIDSLNVWLEVPEDKTSVIKEVIGMLHNSSLIIDDFQDNSPLRRGKP 161 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + V+G ++ +++ +A + + S +AL ++ + ++ +G+ L + N Sbjct: 162 STHTVFGPAQAINTATYVIVKAIEKIQDIVSHDALADVTGMITSIFQGQAMDLWWTANGI 221 Query: 156 VTE-EDYLHVIKSKTAVLFSAALEVSSLI--AGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 V ++YL ++ KT LF +LE+ +L A + +S ++L S LG FQ+ DD + Sbjct: 222 VPSIQEYLLMVNDKTGALFRLSLELLALNSEASISDSTLESLSSVVSLLGQYFQIRDDYM 281 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + K ED GK +L +I A Q Sbjct: 282 NLIDNKYTDQKGFCEDLDEGKYSLTLIHALQ 312 >gi|115491941|ref|XP_001210598.1| hypothetical protein ATEG_00512 [Aspergillus terreus NIH2624] gi|114197458|gb|EAU39158.1| hypothetical protein ATEG_00512 [Aspergillus terreus NIH2624] Length = 358 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 5/216 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL+ GK +R L A L+ D+ ++ + +HT++LL DDV D SALRRG Sbjct: 61 YLLQHPGKDIRRQLINAFDAWLQVPPDSLAIINKVVAMLHTSSLLIDDVEDSSALRRGIP 120 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A + + + A++ L G+ +L L Sbjct: 121 VAHSIYGTAQTINSANYVYFLALQELQKLNNPAAIDIYVKELLNLHRGQGMELFWRDTLT 180 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TE++YL ++ +KT LF A+++ ++ + S LG+ FQ+ DD L+ Sbjct: 181 CPTEDEYLQMVGNKTGGLFRLAVKLMQ----AESKTGKDCVSLVNVLGLIFQICDDYLNL 236 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 K ED GK + P+I + Q + + Sbjct: 237 ANTTYAESKGFCEDLTEGKFSFPIIHSIQSNPQNHQ 272 >gi|62959237|gb|AAY23726.1| farnesyl diphosphate synthase [Bacillus sp. JL-537] Length = 145 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 69/145 (47%), Gaps = 14/145 (9%) Query: 81 HDDV----VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 HDD+ VDD LRRGK V+G ++L GD LLS AF V T A L ++ Sbjct: 1 HDDLPALQVDD--LRRGKPTNHKVYGEDITILAGDALLSYAFEYVARTPDIPAERLLQVI 58 Query: 137 --------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A L G++ L DV+ E + KT L + +++AG + Sbjct: 59 VRLGQAVGAEGLVGGQVADLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKP 118 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLD 213 Q L Y N+G+AFQ+VDD+LD Sbjct: 119 EEVQLLSRYAQNIGLAFQIVDDILD 143 >gi|327482515|gb|AEA85825.1| geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri DSM 4166] Length = 307 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 111/217 (51%), Gaps = 18/217 (8%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+++ + ++ + GKRLRP+L L L+ + ACA+E IH A+L DD+ Sbjct: 47 SELDTVTQALREGTLAPGKRLRPLLLLLALGDLDADPAIGLDPACALEMIHAASLFLDDM 106 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE--------ALEALS 134 +D+++LRRG+ L +G +VL LLS A+ + S AL A + Sbjct: 107 PCMDNASLRRGQPTIHLRFGEDVAVLASVALLSHAYGITAMAPSLSPRQRNDAVALLARA 166 Query: 135 LVACTLAEGELRQL---SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + A L G+ R L ++ LD + + KT LF+AALE+++L+ G ++ Sbjct: 167 VGAQGLVRGQFRDLHGTGQAQQLDAV----IATNQLKTGSLFTAALELAALLVGADRALT 222 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 L+ + LG+AFQL+DD+ D + GK+ +D Sbjct: 223 AHLRGFASELGMAFQLLDDIADGL-SPEQTGKDCQQD 258 >gi|8574390|emb|CAB94793.1| geranylgeranyl pyrophosphate synthase [Mycobacterium aurum] Length = 371 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 26/278 (9%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLV---W-------------GNQTSVLVGDFL 113 ++E +H LL DDV+D+S +RRG+ +A W G +VL+GD Sbjct: 93 SLELLHAFALLQDDVMDESPMRRGRPSAHRAFERWHRERGLPGSSARFGESAAVLLGDLC 152 Query: 114 LSQAFCMVIETKSQEA-----LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168 L A M+ E+ EA + LA G+ L ++ L V + K Sbjct: 153 LVWAEQMLRESGVDEAALTRAWPRYDAMRTELAVGQFADLVNDTAGFPQLDEVLDVARRK 212 Query: 169 TA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 + LE+ + +AG V L YG +G AFQL DD+L G GK G Sbjct: 213 SGNYTVRRPLEIGAALAGCDAEVITVLGRYGEAIGEAFQLRDDLLGVFGAPQTTGKPTGT 272 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE---NRALVDTE 284 D K T V+ ++ T ++ +K + ++S ++ + ++ E + + D Sbjct: 273 DLVARKATTVVVAGYELATGAQQRQFKEFMTAPELSSGDVTRWQALISEVGTVQRIEDMI 332 Query: 285 YRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQRL 321 +R ++ +A DSL D+ + +L+ + C +R+ Sbjct: 333 HRRFAVAVQALDSLDATRLDADARSALVAMASACTERI 370 >gi|256390769|ref|YP_003112333.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928] gi|256356995|gb|ACU70492.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928] Length = 367 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 87/337 (25%), Positives = 141/337 (41%), Gaps = 45/337 (13%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTL--------ATALMLEYRGDNHVLLACAIEFI 74 + ++ +P ++ + GGK +RP +A E G H A ++E + Sbjct: 35 MSPELAPLPTALREFL-DGGKLMRPGFCYWGWRGVLGDSATAQEEEGIVHA--AASLELL 91 Query: 75 HTATLLHDDVVDDSALRRGKVAAR---------LVW-------GNQTSVLVGDFLLSQAF 118 + L+HDD +DDS RRG A W G ++L+GD L+ Sbjct: 92 QASALIHDDYMDDSDTRRGMPAIHRRFAAAHREAAWEGSDERFGAAAAILLGDVCLTWCD 151 Query: 119 CM-----VIETKSQEALEALSLVACTLAEGE-LRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 M + ++ A ++ + G+ L L+ + LD E +++T + Sbjct: 152 EMFAGNGLPAERTAAARRYFDVMRTEVMAGQYLDVLAQAHGLDEPER---AAQRAQTVIR 208 Query: 173 FSAA-------LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 F +A L V +++AG V A +YG+ LG AFQL DDVL G+ GK Sbjct: 209 FKSAKYTIERPLHVGAMLAGGGKDVIAAYSAYGLPLGEAFQLRDDVLGVFGDPAATGKPA 268 Query: 226 GEDFRNGKPTLPVILAFQRGTKREK-NFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284 G+D R GK TL V LA R ++ + + + + + I+R AL D E Sbjct: 269 GDDLREGKQTLLVALAAARADSPAAIKTLRAELGNPDLDTAGVAELQDIIRSTGALDDVE 328 Query: 285 YRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320 R + +A+ +L P D+ K L E+ R Sbjct: 329 TRIAALTDQARAALDAAPIDAEAKTVLGELAVMATAR 365 >gi|327311502|ref|YP_004338399.1| Polyprenyl synthetase [Thermoproteus uzoniensis 768-20] gi|326947981|gb|AEA13087.1| Polyprenyl synthetase [Thermoproteus uzoniensis 768-20] Length = 258 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 15/197 (7%) Query: 34 VKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLACAI-EFIHTATLLHDDVVDDSAL 90 ++Y I + GK +RP+L L +L E D ++ A A+ E +H +LL DDVVD Sbjct: 34 IRYYIETPGKMIRPLLLLLFTYVLDPERLKDERIINAAALLEVLHIVSLLQDDVVDKHDA 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG R ++G+ +++ D+L+++A + S +A++ L+ VA LAEG+ Sbjct: 94 RRGVETPRAIYGDGMAIVASDWLIAEAIERAVSI-SADAVKYLAGVAKRLAEGQ------ 146 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 LD+ E + KTA L AA + ++I ++ +R A + G LG+ +Q DD Sbjct: 147 --ALDI-EGLRKEAAELKTAPLIEAAFVMPTMILSRRDLLRPA-AALGRLLGVLYQYSDD 202 Query: 211 VLDYRGEVNEMGKNIGE 227 + D G EM + E Sbjct: 203 MAD-EGAKREMTPLVDE 218 >gi|296809441|ref|XP_002845059.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS 113480] gi|238844542|gb|EEQ34204.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS 113480] Length = 319 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 7/224 (3%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +R + A L+ ++ ++ + +HTA+LL DDV D S LRRG A ++ Sbjct: 24 GKDIRGQMIAAYNRWLQVPEESLAIVTKVVVMLHTASLLVDDVEDSSHLRRGAPVAHNIF 83 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-TEED 160 G ++ +++ A + + + EA+ L G+ L L TEED Sbjct: 84 GVPQTINSANYVYFLALEEIQKLNNPEAINIFIKELMNLHRGQGMDLYWRDTLTCPTEED 143 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 YL ++ +KT LF A+++ + V + +G+ FQ+ DD L+ Sbjct: 144 YLEMVGNKTGGLFRLAIKLMQTESNVPIDCVPLVDL----MGLMFQVCDDYLNLSNPTYS 199 Query: 221 MGKNIGEDFRNGKPTLPVILAF--QRGTKREKNFWKSTINDGKI 262 K + ED GK + PVI + Q ++ N K ND ++ Sbjct: 200 KNKGLCEDLTEGKFSFPVIHSIRAQPENRQLINILKQKTNDNEV 243 >gi|255024117|ref|ZP_05296103.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Listeria monocytogenes FSL J1-208] Length = 98 Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 2/93 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRG 93 Y + +GGKR+RPML AT L+ V A A+E IHT +L+HDD+ +D+ RRG Sbjct: 3 YSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRG 62 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 K V+G+ T++L GD LL+ AF ++ E ++ Sbjct: 63 KYTNHKVFGDATAILAGDALLTLAFSILAEDEN 95 >gi|21219099|ref|NP_624878.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)] gi|256789883|ref|ZP_05528314.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|289773766|ref|ZP_06533144.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|6013088|emb|CAB57417.1| putative polyprenyl synthetase [Streptomyces coelicolor A3(2)] gi|289703965|gb|EFD71394.1| polyprenyl synthetase [Streptomyces lividans TK24] Length = 352 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 30/240 (12%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRG--------------------KVAAR--- 98 D V A ++E +H A ++HDD++DDS LR G + AAR Sbjct: 71 DALVRAAASMELVHAAAVVHDDLIDDSRLRHGLPTAHVALEAVLARDGRPDARTAARSLA 130 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQLSLSKNLDVT 157 ++ G+Q VL G + ++++ +++A L GE L L D Sbjct: 131 MLVGDQLMVLAGLLFTTSGLPAAYLARARDLW---AVLARELVAGECLEILHTGGPPDTG 187 Query: 158 EEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 L V++ KTA L + L+AG ++R ++Y + LG AFQL DD+L G Sbjct: 188 TS--LKVVRYKTAKYTVEHPLLIGGLLAGAAPALRDTYRAYALPLGEAFQLRDDLLGLFG 245 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + GK +D R +PT + ++ ++ + + + + +L +MRE Sbjct: 246 DPERTGKASLDDLRAHRPTALLAETWKAADASQRQWLRRLLGRDDLDATHLHDVRRLMRE 305 >gi|315186189|gb|EFU19951.1| Polyprenyl synthetase [Spirochaeta thermophila DSM 6578] Length = 357 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 30/196 (15%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVA----------------ARLVWGNQTSVLVG 110 + A+E + L+HDDV+D +RRG + AR V G +V VG Sbjct: 80 VGAALELFQSGLLVHDDVMDRDRVRRGGPSMFAQYEGRADEEGVREARRV-GEALAVCVG 138 Query: 111 DFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV---------TEEDY 161 D F ++ A+ +L+ C +AE E ++ +++ DV + +D Sbjct: 139 DVAFFLGFGLLAGVGRGAAMRD-ALLRC-VAE-EYARVGVAQMDDVWYGATGGGVSLDDV 195 Query: 162 LHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 L V + KT FS L + +L+AG VR AL+ G LG+ FQ+ DD L G E Sbjct: 196 LRVYRYKTGRYTFSVPLSLGALLAGADEGVRGALEEVGELLGVVFQIRDDELGLFGSEEE 255 Query: 221 MGKNIGEDFRNGKPTL 236 +GK G D R GK T+ Sbjct: 256 IGKPAGSDVREGKRTV 271 >gi|302539632|ref|ZP_07291974.1| putative mucin-2 [Streptomyces hygroscopicus ATCC 53653] gi|302457250|gb|EFL20343.1| putative mucin-2 [Streptomyces himastatinicus ATCC 53653] Length = 468 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 27/231 (11%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 +L+ + G+ RP + A +L+ + + L E +H + L+ DD+ DDS RRG+ Sbjct: 144 HLLNNPGRSWRPYVAAAVLCLLDADPEPYRPLTAVTELLHLSALVIDDIQDDSPTRRGRP 203 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + V+G ++ G L F +I+ Q A E + L L +LR + LD Sbjct: 204 SVHEVFGTAPAITAG-TLGYYTFDALIQRVPQAAPETM-LRIYRLYLRDLRAAHAGQALD 261 Query: 156 -----------VTEEDYLHVI-------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 VT D ++ + KT +L + EVS+L+ G A+ Y Sbjct: 262 IAGHHAAFDEAVTSGDARPLLDEVRTAHRLKTGMLVRSTAEVSALLGGADERQLDAICRY 321 Query: 198 GMNLGIAFQLVDDVLDYRGEV----NEMG---KNIGEDFRNGKPTLPVILA 241 +G A+Q+ DDV D G V ++ G ++ ED RNG+ T PV A Sbjct: 322 FEAVGTAYQITDDVADLYGLVTAQEHQQGITTRSPAEDLRNGEVTYPVAHA 372 >gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis] Length = 306 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 26/203 (12%) Query: 28 EMIPDVVKYLIFSG-GKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDD 83 E I + ++Y + + KR P++ +A E G N + ACA+E +H A+L+HDD Sbjct: 39 EEIYEAMRYSVLAKRTKRAPPVMCIAAC---ELFGGNRLAAFPTACALEMVHAASLIHDD 95 Query: 84 V--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE---------- 131 + +DD+ RRG+ + V+G ++L GD L F ++ + + Sbjct: 96 LPCMDDAPSRRGQPSNHAVYGVDKAILAGDALFPLGFRHIVSNTPSDLVPEPRLLRVIAE 155 Query: 132 -ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A ++ + +A G+ L L +L+ E V + K + + L+AG ++ Sbjct: 156 IARAVGSTGMAAGQF--LDLEGSLNSAE----FVQEKKYGEMGECSAVCGGLLAGAEDDE 209 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 Q L+ YG +G+ ++++DDVL+ Sbjct: 210 IQRLRRYGRAVGVLYKVIDDVLE 232 >gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii] Length = 334 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 28/204 (13%) Query: 30 IPDVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDV- 84 I + ++Y + + G KR P++ +A E G N + ACA+E +H A+L+HDD+ Sbjct: 70 IYEAMRYSVLAKGAKRSPPIMCVAAC---ELFGGNRLAAFPTACALEMVHAASLIHDDLP 126 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----------A 132 +DD RRG A V+G ++L GD L F ++ + + A Sbjct: 127 CMDDDTTRRGLPANHTVFGVDMAILAGDALFPLGFQHIVSHTPSDLVPEDRILRVITEIA 186 Query: 133 LSLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 ++ + +A G+ L N +D +E + +AV +L+AG + Sbjct: 187 RAVGSTGMAAGQFLDLEGGPNAVDFVQEKKYGEMGECSAV-------CGALLAGASDEEI 239 Query: 192 QALKSYGMNLGIAFQLVDDVLDYR 215 Q ++ YG +G+ +++VDD+L+ + Sbjct: 240 QHMRKYGRAVGVLYRVVDDILEAK 263 >gi|326435055|gb|EGD80625.1| quemao protein [Salpingoeca sp. ATCC 50818] Length = 328 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 22/234 (9%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ + Y+ GK +R L A L L+ D + + +H A+LL DD+ D+ Sbjct: 26 EILQEPYNYITQIPGKDIRSQLIQAFNLWLKVPDDKLSKIKSVTKILHNASLLIDDIEDN 85 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A V+G ++ +++ +A + +A + + +L + Sbjct: 86 SKLRRGIPVAHSVYGVAQTINCANYMYFKAMAEIAALGHPDAAQVFT--------DQLLE 137 Query: 148 LSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L + +D+ TE++Y ++ KT LF A+++ L + L ++G Sbjct: 138 LHRGQGMDIYWRDAFVCPTEDEYRTMVLRKTGGLFQLAVQIMQLFSDDSRDYTPLLNAFG 197 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 + FQ+ DD + + + E K+ ED GK + P+I + R T ++ Sbjct: 198 L----YFQIRDDYANLQSKEYEDNKSFCEDITEGKFSFPIIHSI-RATPHDRQL 246 >gi|332797814|ref|YP_004459314.1| polyprenyl synthetase [Acidianus hospitalis W1] gi|332695549|gb|AEE95016.1| polyprenyl synthetase [Acidianus hospitalis W1] Length = 282 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 9/184 (4%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 I ++ KY I GKR R L L N A A E +H+A+L DD+VD Sbjct: 30 IMEMSKY-IMKDGKRFRGTLVFLFNDALGGEEKNAYQGALATEILHSASLALDDIVDYDL 88 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 RRG +A V+ N+ + V +FL+ A +I + +EAL + A G L+ + Sbjct: 89 TRRGMASAWAVYTNRRVIFVSNFLIPTA-LKIISSYGKEALNISIELWKDTAIGALKDMY 147 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 K +Y I+ KTA LF ++S +G + V + L++ G LG+ +QL+D Sbjct: 148 GDKR------EYFKTIELKTASLFKLPAMLASFSSGKKELVDKLLEA-GRVLGVIYQLID 200 Query: 210 DVLD 213 D +D Sbjct: 201 DYVD 204 >gi|126666905|ref|ZP_01737881.1| putative polyprenyl diphosphate synthase [Marinobacter sp. ELB17] gi|126628621|gb|EAZ99242.1| putative polyprenyl diphosphate synthase [Marinobacter sp. ELB17] Length = 344 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 6/210 (2%) Query: 10 KDMEKVNFLILKRICSDVEMIPD-VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 + +E+V L+L + +E + +Y I + G LR L LA+ E + V+ A Sbjct: 33 RALEQVRALMLDALQGVMEGPANNASQYQISTRGSLLRARLALASCRSFECSQEYAVVAA 92 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKS 126 E IH A+L+HDD++D LRRG+ G ++ GD LL AF + ++ Sbjct: 93 ACCELIHNASLVHDDLLDGDQLRRGQATVWKRHGRGVALCAGDLLLCTAFAVSAGLDDAQ 152 Query: 127 QEALEALSLVACT---LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 Q L L A T + + + + Y+ ++KT L L ++ Sbjct: 153 QSRLLTQYLAAMTGRVIVGQSIEIAPVEPGVQPRFRAYIEAAQAKTVPLIQLPLMTGAIA 212 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 A + SV ++K + +G+A+Q++DD+ D Sbjct: 213 AKAELSVLDSIKRFAEAVGLAYQIIDDLDD 242 >gi|170016839|ref|YP_001727758.1| geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20] gi|169803696|gb|ACA82314.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20] Length = 304 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 3/94 (3%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDSALRR 92 Y + +GGKRLRP+LTLA ++L LA A+E++H+ +L+HDD+ +D+ RR Sbjct: 38 YAVLNGGKRLRPLLTLAVLSSFNVSVTPNLLKLATAVEWVHSYSLVHDDLPAMDNDLWRR 97 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 G+ + +G +++LVGD LL+ AF +V E + Sbjct: 98 GQPSVHAKFGESSAILVGDALLTGAFQVVSEANA 131 >gi|238498722|ref|XP_002380596.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] gi|220693870|gb|EED50215.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] Length = 271 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H A+LL DD+ D S LRRG+ AA ++G ++ ++LL QA V + +Q ++ Sbjct: 20 ETLHNASLLLDDIEDSSPLRRGQPAAHTIFGQGQTINSANYLLIQAMDQVRQLDNQRCMD 79 Query: 132 ALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSL 182 E+R L + ++ D+ ++++YL +I KT LF + + Sbjct: 80 VFV--------EEMRNLFIGQSFDLYWTRQGECPSQDEYLEMISQKTGGLFRLLTRLMTE 131 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 A Q++ L S LG FQ+ DD + E + K ED GK + P++ A Sbjct: 132 KASTQHNSTITLDSLVSLLGQYFQIRDDYKNLT-EDYAIQKGFCEDLDEGKYSFPLVHAL 190 Query: 243 QRGTKREKNFW-----KSTINDGKIS-------VENLKKA 270 T + +NF + + N G +S +E LK+A Sbjct: 191 ---TTQPRNFQLRGILRESRNTGGMSLPLKQCVLEQLKQA 227 >gi|67527046|gb|AAY68315.1| putative geranylgeranyl pyrophosphate synthetase [uncultured marine bacterium 66A03] Length = 338 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 17/186 (9%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 S GK+LR + L+ ++ D+ L A A+E +H A+L+HDD+ D +RR + Sbjct: 53 SKGKQLRAKIALSAGE--KFGADDAACLHWASAVELLHNASLIHDDICDGDTIRRNNASV 110 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA-------CTLAEGELRQLSL 150 +G ++ +GD+++++AF K+ + +LV T+A G+ + Sbjct: 111 WAKYGRDIALALGDWMIAEAFQQA--AKAAHVSNSFNLVTKLSNHVKSTIA-GQALEFDN 167 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + D+ + YL + KTA LF AA+E + IAG ++ + + + Y + +GI +Q +D Sbjct: 168 ALYPDI--DKYLEISAGKTAPLFVAAIEGIAEIAG-RSELIEEINHYFVTMGICYQFAND 224 Query: 211 VLDYRG 216 + + G Sbjct: 225 IQNILG 230 >gi|146084366|ref|XP_001464985.1| polyprenyl synthase [Leishmania infantum JPCM5] Length = 742 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 37/247 (14%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATL 79 +IC E + V+ +I GGK R ++ + AL +Y D +A A E +H +L Sbjct: 430 KIC---ETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYF-DCRRYIAVA-ELLHVGSL 484 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVA 137 + DD+ D+S +RRG + +G T++ G + + + + ++A L Sbjct: 485 IIDDIQDNSVVRRGGKCVHVEYGVPTAINAGSACYFMGPRAARIQDLPPEKASRIYQLYF 544 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYL--------------------HVIKSKTAVLFSAAL 177 L G Q LD+ DYL H K+ AV A Sbjct: 545 DVLLAGHAGQ-----GLDIYRLDYLMPKVVETGDASTLFDALDAIHTYKTGGAV--GALC 597 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ ++ + +A++ +G+ LG+AFQ+VDD L+ RG + K ED ++GK T P Sbjct: 598 SMACVLCEAPTVLSEAVERFGLALGLAFQIVDDALNIRGFEGNL-KEEAEDIKDGKITYP 656 Query: 238 VILAFQR 244 + +A R Sbjct: 657 IAIAMGR 663 >gi|307325950|ref|ZP_07605149.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306888442|gb|EFN19429.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 359 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 113/270 (41%), Gaps = 26/270 (9%) Query: 16 NFLILKRICSDVEMIPDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAI 71 +FL K + +P + L SGGKR+RP+L + + D + +A + Sbjct: 26 DFLTAKARTTPQHHLPYLSGLLKDFLSGGKRIRPLLCVTGWQAVGGGEDTDAVFRVAACL 85 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLV----------------WGNQTSVLVGDFLLS 115 E H L+HDDV+DDS RRG+ +G +VL+GD L+ Sbjct: 86 EMFHAFALIHDDVMDDSDTRRGRPTIHRTLAALCAADRRPDQIERFGVSGAVLLGDLALT 145 Query: 116 QA-----FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170 + + + L LS + + G+ L + L E L V + KTA Sbjct: 146 WSDELLHSAGLTPAQFDAVLPLLSEMRTEVMLGQYLDLQATGELTDDVEATLTVNRYKTA 205 Query: 171 -VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 L V + IAG +A +Y + LG AFQL DD+L G+ GK+ +D Sbjct: 206 KYTIERPLHVGAAIAGAAPEAMEAFTAYALPLGEAFQLRDDLLGVYGDPESTGKSQLDDL 265 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTIND 259 R GK T + LA + + +S I + Sbjct: 266 RAGKNTTLIALALRGSDSAQAARLRSLIGN 295 >gi|317156125|ref|XP_001825412.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40] Length = 692 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 21/190 (11%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H A+LL DD+ D S LRRG+ AA ++G ++ ++LL QA V + +Q ++ Sbjct: 441 ETLHNASLLLDDIEDSSPLRRGQPAAHTIFGQGQTINSANYLLIQAMHQVRQLDNQRCMD 500 Query: 132 ALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSL 182 E+R L + ++ D+ ++++YL +I KT LF + + Sbjct: 501 VFV--------EEMRNLFIGQSFDLYWTRQGECPSQDEYLEMISQKTGGLFRLLTRLMTE 552 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 A Q++ L S LG FQ+ DD + E + K ED GK + P++ A Sbjct: 553 KASTQHNSTITLDSLVSLLGQYFQIRDDYKNLT-EDYAIQKGFCEDLDEGKYSFPLVHAL 611 Query: 243 QRGTKREKNF 252 T + +NF Sbjct: 612 ---TTQPRNF 618 >gi|310792814|gb|EFQ28275.1| polyprenyl synthetase [Glomerella graminicola M1.001] Length = 433 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 5/205 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL GK R L A + LE ++ ++ + +HTA+LL DDV D S+LRRG Sbjct: 148 YLSALPGKDFRSQLIQAFNVWLEVPQESIDVITNVVGMLHTASLLIDDVEDSSSLRRGLP 207 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ +A V K+ +A+ + L G+ L L Sbjct: 208 VAHNIFGVAQTINSANYIYFRALQEVQRLKNPKAITIFAEELVHLHRGQGMDLFWRDTLT 267 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEEDYL ++ +KT LF ++ L+ S+ ++ + +G+ FQ+ DD ++ Sbjct: 268 CPTEEDYLEMVGNKTGGLFRLGIK---LMQAESRSLTDCVELVNL-MGLIFQIRDDYMNL 323 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVI 239 + K + ED GK + P+I Sbjct: 324 SSKEYSDNKGMCEDLTEGKFSFPII 348 >gi|307328224|ref|ZP_07607402.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306886058|gb|EFN17066.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 345 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 22/229 (9%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 V+ +LK SDV I + + L + G+RLRP+L L A + V A +E Sbjct: 21 VDEGLLKATKSDVPFINEAARELTRTAGRRLRPLLVLLAARFGDPGAPGVVPAAVVVELT 80 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 H AT HD V D++A+R G W N +VL+GDFL ++A ++ + Q A+ Sbjct: 81 HLATHYHDGVRDETAVRPGARGPDANWDNTVAVLIGDFLFARASHILADLGPQ----AVR 136 Query: 135 LVACTL---AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L A G++ + + ++ E +L V+ +T L + + + +L++G S Sbjct: 137 LQAEAFRRQVTGQILETAGPRDGRDPVEHHLEVLAGRTGALTAVSGRLGALVSGADPSAV 196 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 AL YG LG+A L D++ +PTLPV+L Sbjct: 197 DALARYGERLGMASHLADELATPTAR---------------RPTLPVLL 230 >gi|126741029|ref|ZP_01756712.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6] gi|126717955|gb|EBA14674.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6] Length = 293 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 69/253 (27%), Positives = 113/253 (44%), Gaps = 21/253 (8%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGK LR L L +A + + A AIE +H +L HDD+ LRRG+ Sbjct: 46 GGKMLRGFLVLESARLHGVSQKVALDAALAIECLHAYSLAHDDLPCMDDDDLRRGQPTLH 105 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 W +VL GD L Q F + + ALSL+ + + LD+ Sbjct: 106 RKWDEAMAVLAGDSL--QCFAFELLSNPDMGPNALSLIRDLAKSAGKDGMVSGQMLDIAA 163 Query: 159 E--------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 E + + ++++ KT L + +++AG ++ L+ Y LG+AFQ+ D Sbjct: 164 ETAETPLTLEQISLLQARKTGCLIEWSASAGAVLAGADST---PLRQYATALGLAFQIAD 220 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK---STINDGKISVEN 266 D+LD G+V ++GK + +D GK T +L R + + + + E Sbjct: 221 DILDVEGDVQKVGKAVRKDANAGKATFVSLLGLDTAKTRARTLCEEACAALAPYGEQGEC 280 Query: 267 LKKA--FIIMREN 277 LK+A F+I R++ Sbjct: 281 LKEAARFVISRDS 293 >gi|126438016|ref|YP_001073707.1| polyprenyl synthetase [Mycobacterium sp. JLS] gi|126237816|gb|ABO01217.1| Polyprenyl synthetase [Mycobacterium sp. JLS] Length = 374 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 73/259 (28%), Positives = 103/259 (39%), Gaps = 28/259 (10%) Query: 12 MEKVNFLILKRICSD-----VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 ++ V + R D V++ DV+ + GK LR L D + Sbjct: 37 IDAVTEFVTDRCADDLRLTGVDVTLDVLSDFV-GDGKCLRSTFAYLGWLAGAAPDDAALR 95 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARL---VW-------------GNQTSVLVG 110 A + + +H LL DDV+DDS LRRG+ AA + W G +VL+G Sbjct: 96 AAASFDLLHVFALLQDDVMDDSPLRRGRPAAHVRFAQWHRDNGLNGSAERFGASAAVLLG 155 Query: 111 DFLLSQAFCMVIETKSQE-----ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 D L A M+ E+ + A + LA G+ L T ED L V Sbjct: 156 DLCLVWAGQMMRESGLGDRALARAWPRYDAMRTELAVGQFADLVNDAGGRPTLEDVLDVA 215 Query: 166 KSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + K+ LE+ +AG + L YG +G AFQL DD+L G GK Sbjct: 216 RRKSGNYTVRRPLEIGGALAGCPEATLGLLGRYGAAVGEAFQLRDDLLGIFGAPTVTGKP 275 Query: 225 IGEDFRNGKPTLPVILAFQ 243 G D K T V+ A + Sbjct: 276 AGGDLSEHKATSVVVAAHR 294 >gi|261399278|dbj|BAI44849.1| fusicoccadiene synthase [Alternaria brassicicola] Length = 697 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 4/184 (2%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 AI +H A+L+ DDV D S LRR K +A V+G + FL++++ ++ E + Sbjct: 443 AIRMLHNASLMLDDVQDGSRLRRSKPSAHRVFGVAQTTNSAAFLVNESIKLIRELAGDQG 502 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + A+ +L G+ + L S+NL +Y+ I KT+ LF A + L + Sbjct: 503 VAAVLEKLTSLFVGQAQDLHSSRNLSPPSLTEYIQTIDQKTSALFELASRLMCLCSTATV 562 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 +L + + LG FQ+ DD + K +D +G TLP++ A +++ Sbjct: 563 VPNSSLSRFCILLGRFFQIRDDYQNLTSPEYTKQKGFCDDLDSGTYTLPLVYAI---SQQ 619 Query: 249 EKNF 252 +NF Sbjct: 620 SENF 623 >gi|67003501|dbj|BAD99412.1| GGPP synthase [Brevundimonas sp. SD212] Length = 298 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 16/199 (8%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARL 99 GKR+RP++ + A + R ++ + CA+E H A+L+ DD+ +DD+ALRRG+ Sbjct: 53 GKRVRPVVAMLAAAHVGGRAEDALDFGCAVEMAHAASLVLDDLPCMDDAALRRGQPTLHR 112 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQE-----ALEALSLVAC--TLAEGELRQLSLSK 152 G +VL LL+Q+ +++++++ AL+ L+ LAEG++R L Sbjct: 113 RHGEDAAVLAAVALLNQSTRLILQSRAPSEARLGALDDLTQAIGFDGLAEGQMRDL---- 168 Query: 153 NLDVTEEDYLHVIKS---KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 D + D + + + KT LF AA + G L ++G +G AFQL D Sbjct: 169 RDDPVQRDVVALRRINDLKTGALFVAAARGGGRMGGGDADDLARLAAFGEAVGFAFQLCD 228 Query: 210 DVLDYRGEVNEMGKNIGED 228 D++D +GK++G+D Sbjct: 229 DLMDACSTSEALGKDVGQD 247 >gi|322498420|emb|CBZ33493.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 742 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 37/247 (14%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATL 79 +IC E + V+ +I GGK R ++ + AL +Y D +A A E +H +L Sbjct: 430 KIC---ETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYF-DCRRYIAVA-ELLHVGSL 484 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVA 137 + DD+ D+S +RRG + +G T++ G + + + + ++A L Sbjct: 485 IIDDIQDNSVVRRGGKCVHVEYGVPTAINAGSACYFMGPRAARIQDLPPEKASRIYQLYF 544 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYL--------------------HVIKSKTAVLFSAAL 177 L G Q LD+ DYL H K+ AV A Sbjct: 545 DVLLAGHAGQ-----GLDIYRLDYLMPKVVESGDASTLFDALDAIHTYKTGGAV--GALC 597 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ ++ + +A++ +G+ LG+AFQ+VDD L+ RG + K ED ++GK T P Sbjct: 598 SMACVLCEAPTVLSEAVERFGLALGLAFQIVDDALNIRGFEGNL-KEEAEDIKDGKITYP 656 Query: 238 VILAFQR 244 + +A R Sbjct: 657 IAIAMGR 663 >gi|258653364|ref|YP_003202520.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233] gi|258556589|gb|ACV79531.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233] Length = 377 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 41/257 (15%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLT----LATALMLEYRGDNHVL-LACAIEFIH 75 R+ +DVE++ V++ + GGKRLRP LA + VL +A A+E + Sbjct: 40 PRLVADVELL---VEF-VTDGGKRLRPQFLWCGWLAGGGAATGPDADAVLQVAAALELLQ 95 Query: 76 TATLLHDDVVDDSALRRGK------VAARLV----------WGNQTSVLVGDFLLSQAFC 119 LLHDD++D S RRG+ VA R G ++L+GD L A+C Sbjct: 96 ACALLHDDIIDRSQRRRGRPSTHRAVAKRAADAGVAADPEHHGVSVAILLGDLAL--AWC 153 Query: 120 -------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV----TEEDYLHVIKSK 168 + + A + + G+L L+++ + + E D + V + K Sbjct: 154 DDLFLAGALPLGAAHRAAPVWRAMRTEVLAGQLLDLAVTVSAEADPATQERDAMRVNRYK 213 Query: 169 TAV-LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 TA L + + +AG + AL++YG ++G+AFQL DD+L G+ GK G+ Sbjct: 214 TAAYTIERPLHLGAALAGAAPATIAALRTYGTDIGVAFQLRDDLLGVFGDPAVTGKPAGD 273 Query: 228 DFRNGKPTLPVILAFQR 244 D GK T V+LA R Sbjct: 274 DLVEGKQT--VLLALAR 288 >gi|305681416|ref|ZP_07404223.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266] gi|305659621|gb|EFM49121.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266] Length = 362 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 70/235 (29%), Positives = 108/235 (45%), Gaps = 30/235 (12%) Query: 38 IFSGGKRLRPMLTLATALM---LEYRGDNHVLL---ACAIEFIHTATLLHDDVVDDSALR 91 + +GGKR+RP A + L RG++ + A A+E I L+HDD++D S R Sbjct: 50 VLTGGKRIRPCYVWAGFVAGGGLRNRGEDPAAVLRAASALELIQACALIHDDIIDSSDTR 109 Query: 92 RG-----KVAARL----VW-------GNQTSVLVGDFLLSQAFCMVIETK-SQEALE--- 131 RG + A R W G ++LVGD + A MV S AL+ Sbjct: 110 RGNPTVHRSAQRRHEEGRWHGDADHFGCSVAILVGDLAFAWADDMVRAAGLSHAALDRIQ 169 Query: 132 -ALSLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A + + G+L + S + D+ ++ K+ A L + + +AG Sbjct: 170 PAWRGMRTEVIGGQLLDIIHEASGDEDIATAQVVNRFKT-AAYTIERPLHLGAALAGADA 228 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + AL++YG ++G+AFQL DD L G+ GK G+D R GK T+ + A Q Sbjct: 229 ATIAALRAYGTDIGVAFQLRDDQLGVFGDPGVTGKPAGDDLREGKRTVLIATALQ 283 >gi|321399323|emb|CAM67227.2| putative polyprenyl synthase [Leishmania infantum JPCM5] Length = 742 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 37/247 (14%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATL 79 +IC E + V+ +I GGK R ++ + AL +Y D +A A E +H +L Sbjct: 430 KIC---ETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYF-DCRRYIAVA-ELLHVGSL 484 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVA 137 + DD+ D+S +RRG + +G T++ G + + + + ++A L Sbjct: 485 IIDDIQDNSVVRRGGKCVHVEYGVPTAINAGSACYFMGPRAARIQDLPPEKASRIYQLYF 544 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYL--------------------HVIKSKTAVLFSAAL 177 L G Q LD+ DYL H K+ AV A Sbjct: 545 DVLLAGHAGQ-----GLDIYRLDYLMPKVVETGDASTLFDALDAIHTYKTGGAV--GALC 597 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ ++ + +A++ +G+ LG+AFQ+VDD L+ RG + K ED ++GK T P Sbjct: 598 SMACVLCEAPTVLSEAVERFGLALGLAFQIVDDALNIRGFEGNL-KEEAEDIKDGKITYP 656 Query: 238 VILAFQR 244 + +A R Sbjct: 657 IAIAMGR 663 >gi|50550901|ref|XP_502923.1| YALI0D17050p [Yarrowia lipolytica] gi|49648791|emb|CAG81114.1| YALI0D17050p [Yarrowia lipolytica] Length = 327 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 17/261 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL + G +R L A +++ + ++ + +H ++LL DDV D+S LRRG Sbjct: 26 YLANNRGHNIREHLIAAFGAVIKVDKSDLETISHITKILHNSSLLVDDVEDNSMLRRGLP 85 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 AA ++G ++ +++ A V++ KS +A+ + L G+ L + L Sbjct: 86 AAHCLFGVPQTINSANYMYFVALQEVLKLKSYDAVSIFTEEMINLHRGQGMDLYWRETLT 145 Query: 156 VTEED-YLHVIKSKTAVLFSAALEVSSLIAGVQNS---VRQALKSYGMNLGIAFQLVDDV 211 ED YL ++ KT LF AL + +A Q + L LG+ +Q++DD Sbjct: 146 CPSEDEYLEMVVHKTGGLFRLALRLMLSVASKQEDHEKINFDLTHLTDTLGVIYQILDDY 205 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTINDGKISVENLKK 269 L+ + K ED GK + P+I + + + N K +D + K Sbjct: 206 LNLQSTELTENKGFCEDISEGKFSFPLIHSIRTNPDNHEILNILKQRTSDASLK----KY 261 Query: 270 AFIIMRENRALVDTEYRAYSY 290 A MR TE +++ Y Sbjct: 262 AVDYMR-------TETKSFDY 275 >gi|309812764|ref|ZP_07706503.1| polyprenyl synthetase [Dermacoccus sp. Ellin185] gi|308433281|gb|EFP57174.1| polyprenyl synthetase [Dermacoccus sp. Ellin185] Length = 402 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 97/230 (42%), Gaps = 31/230 (13%) Query: 33 VVKYLIFSGGKRLRPMLTLATALML---------EYRGDNHVLLACAIEFIHTATLLHDD 83 +V+ L+ +GGK +RP L L D V +A A E +H LL DD Sbjct: 92 LVRDLLAAGGKLVRPRLVRLGYLAARECTNPDDDPATTDAVVRVAAAFELLHLFGLLQDD 151 Query: 84 VVDDSALRRGKV-----------------AARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 V+D S RRG AARL G+ +VL GD + A +V Sbjct: 152 VMDASDTRRGTPTAHHQVRAAAAQPDGPDAARL--GDSVAVLAGDLAFALANRLV-RALP 208 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT-AVLFSAALEVSSLIAG 185 + +A L G+ L + + E V +K+ A LE+ +L+AG Sbjct: 209 EHVADAWDAAVVELVTGQRLDLVFAAEARLDEVSTRRVAHAKSGAYTVQRPLEIGALLAG 268 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +++ L +G LG AF L DD++ GE GK GED R KPT Sbjct: 269 -ESAPPTWLSRFGAALGEAFALADDIIGLWGEPAVTGKPAGEDLRERKPT 317 >gi|254819742|ref|ZP_05224743.1| polyprenyl synthetase [Mycobacterium intracellulare ATCC 13950] Length = 349 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 79/326 (24%), Positives = 144/326 (44%), Gaps = 29/326 (8%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIHTATLL 80 I +D + ++ + GGKRLRP A+ + + +LL A+E +H L+ Sbjct: 23 IGNDYNGLIAALEDFVLGGGKRLRPAFAYWGWRAVATDEPDEQVLLLFSALELLHACALV 82 Query: 81 HDDVVDDSALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQA----FCM 120 HDDV+DDS+ RRG+ + W G ++L+GD L+ A F + Sbjct: 83 HDDVIDDSSTRRGRPTTHVQFATLHRDRGWQGSPERFGASAAILLGDLALAWADDIVFGI 142 Query: 121 VIETKSQEALEAL-SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALE 178 + ++Q + + + + + G+ + + + ++V KTA S L+ Sbjct: 143 DLTPQAQRRIRRVWANIRTEVLGGQYLDIVAEASAAASIASAMNVDTFKTACYTVSRPLQ 202 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + A + V +G +LG+AFQL DDVL G+ GK G+D R+GK T+ + Sbjct: 203 LGVAAAADRPDVHDIFSQFGTDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTVLL 262 Query: 239 ILAFQRGTKREK---NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 A + + N +++I +++ + + ++ AL E R + Q+A Sbjct: 263 AEAVELAETSDPVAANLLRTSIG-AQLTDAQVDRLREVIESVGALAAAEQRIATLTQRAL 321 Query: 296 DSLRCLP-DSSWKKSLMEVVDFCLQR 320 +L P +++ K L E+ R Sbjct: 322 ATLAAAPINTAAKAGLSELAKIATNR 347 >gi|15835530|ref|NP_297289.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia muridarum Nigg] gi|270285718|ref|ZP_06195112.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia muridarum Nigg] gi|270289727|ref|ZP_06196029.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia muridarum Weiss] gi|301337112|ref|ZP_07225314.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia muridarum MopnTet14] gi|7190945|gb|AAF39709.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia muridarum Nigg] Length = 292 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 28/202 (13%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDSAL 90 ++Y + GGKR+RP+L A ++ R D VL A A+E+IHT+TL+ DD+ +D+ + Sbjct: 33 IEYALLGGGKRVRPLLVCLFADSIQKRRD--VLDTAIAVEYIHTSTLIADDLPCMDNDDM 90 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----------------IETKSQEALEALS 134 RRGK + + +++L L+ A+ + IE ++ L+ + Sbjct: 91 RRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKEVVSVQREIEDAYEDVLDLIE 150 Query: 135 L---VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L V L G+ + TEE +++I KT+ LF A L G Sbjct: 151 LRFGVEGVLG-GQYEDVFFQS---FTEESVINIINKKTSALFEIACVSGWLFGGGAREKT 206 Query: 192 QALKSYGMNLGIAFQLVDDVLD 213 + + N GI FQ+ DD+ D Sbjct: 207 PLVIEFARNFGILFQIGDDLAD 228 >gi|62959227|gb|AAY23721.1| farnesyl diphosphate synthase [Microbulbifer sp. JL-463] Length = 142 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 73/142 (51%), Gaps = 11/142 (7%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 HDD+ +DD +LRRGK + +G T++LVGD L AF + T S+ A A Sbjct: 1 HDDLPSMDDDSLRRGKPTCHVAYGEATAILVGDALQCSAF-EALATLSEPEFVAPLTRAL 59 Query: 139 TLAEGELRQLSLSKNLDVTEEDYL---HVIKS----KTAVLFSAALEVSSLIAGVQNSVR 191 A G R + L + LD+ E L H ++ KT L A++ + +L+A V Sbjct: 60 ARASGS-RGMILGQTLDIEAEGSLLNEHQLEQMHRLKTGALIDASVAMPALLANVTKDEV 118 Query: 192 QALKSYGMNLGIAFQLVDDVLD 213 AL Y LG+AFQ+ DD+LD Sbjct: 119 SALTKYSRALGLAFQIQDDILD 140 >gi|225021908|ref|ZP_03711100.1| hypothetical protein CORMATOL_01940 [Corynebacterium matruchotii ATCC 33806] gi|224945295|gb|EEG26504.1| hypothetical protein CORMATOL_01940 [Corynebacterium matruchotii ATCC 33806] Length = 368 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 104/235 (44%), Gaps = 30/235 (12%) Query: 38 IFSGGKRLRPMLTLA---TALMLEYRGDNHVLL---ACAIEFIHTATLLHDDVVDDSALR 91 + +GGKR+RP A L RG++ + A A+E I L+HDD++D S R Sbjct: 50 VLTGGKRIRPCYVWAGFVAGGGLRNRGEDPAAVLRAASALELIQACALIHDDIIDSSDTR 109 Query: 92 RGKVAARLV---------W-------GNQTSVLVGDFLLSQAFCMVIETK-SQEALE--- 131 RG W G ++LVGD + A MV S AL+ Sbjct: 110 RGNPTVHRSAQRRHEEGRWHGDADHFGCSVAILVGDLAFAWADDMVRAAGLSHAALDRMQ 169 Query: 132 -ALSLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 A + + G+L + S + D+ ++ K+ A L + + +AG Sbjct: 170 PAWRGMRTEVIGGQLLDIIHEASGDEDIATAQVVNRFKT-AAYTIERPLHLGAALAGADA 228 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + AL++YG ++G+AFQL DD L G+ GK G+D R GK T+ + A Q Sbjct: 229 ATIAALRAYGTDIGVAFQLRDDQLGVFGDPGVTGKPAGDDLREGKRTVLIATALQ 283 >gi|238589678|ref|XP_002392090.1| hypothetical protein MPER_08383 [Moniliophthora perniciosa FA553] gi|215457662|gb|EEB93020.1| hypothetical protein MPER_08383 [Moniliophthora perniciosa FA553] Length = 153 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 7/155 (4%) Query: 168 KTAVLFSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA L + ++ + G R+ +YG NLGIAFQLVDDVLDY + +GK Sbjct: 2 KTASLMAKGARAATCLGGCTEGELYREIAYAYGRNLGIAFQLVDDVLDYEAVEDTLGKPG 61 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 G D + G T P + A++ + N G + + A +R++ + T Sbjct: 62 GADLQLGLATGPALYAWEEHAGMGPLIQRKFSNAGDVEL-----ARDYVRKSSGVERTRQ 116 Query: 286 RAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A Y +AK L+ LPDS + +L + D ++R Sbjct: 117 LATEYANQAKIVLQPLPDSDARGALEALTDRVIKR 151 >gi|157868092|ref|XP_001682599.1| polyprenyl synthase [Leishmania major strain Friedlin] gi|68126054|emb|CAJ07107.1| putative polyprenyl synthase [Leishmania major strain Friedlin] Length = 742 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 37/247 (14%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATL 79 +IC E + V+ +I GGK R ++ + AL +Y D +A A E +H +L Sbjct: 430 KIC---ETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYF-DCRRYIAVA-ELLHVGSL 484 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVA 137 + DD+ D+S +RRG + +G T++ G + + + + ++A L Sbjct: 485 IIDDIQDNSVVRRGGKCVHVEYGVATAINAGSACYFMGPRAARIQDLPPEKASRIYQLYF 544 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYL--------------------HVIKSKTAVLFSAAL 177 L G Q LD+ DYL H K+ AV A Sbjct: 545 DVLLAGHAGQ-----GLDIYRLDYLMPKVVETGDASTLFDALDAIHTYKTGGAV--GALC 597 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ ++ + +A++ +G+ LG+AFQ+VDD L+ RG E K ED ++GK T P Sbjct: 598 SMACVLCEAPTVLSEAVERFGLALGLAFQIVDDALNIRG-FEENLKEEAEDIKDGKITYP 656 Query: 238 VILAFQR 244 +A R Sbjct: 657 TAIAMGR 663 >gi|296813323|ref|XP_002846999.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS 113480] gi|238842255|gb|EEQ31917.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS 113480] Length = 345 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 16/211 (7%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK R L A + L+ D+ ++ I +H A+LL DD+ D+S LRRG+ Sbjct: 61 YITSKPGKEFRTQLLSAFNVWLKVSPDSLQCISGVIRMLHNASLLVDDIQDNSRLRRGRP 120 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A V+G ++ +F+ A + + S+EA+E + +L G+ L L Sbjct: 121 VAHSVFGVAQTINSANFVYFLALAELQKLPHSKEAMEIFTAEMLSLHRGQGMDLFWRDTL 180 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV-- 211 +E+DYL ++ +KT LF A+++ + A + V + + LG+ FQ+ DD Sbjct: 181 SCPSEDDYLEMVSNKTGGLFRLAIKL--MQAECETKV-DCMPLVNL-LGLIFQITDDYRN 236 Query: 212 ---LDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 LDY + K ED GK + PV+ Sbjct: 237 LASLDYTRK-----KGFCEDLTEGKFSFPVV 262 >gi|289615531|emb|CBI57772.1| putative farnesyltranstransferase [Sordaria macrospora] Length = 436 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 9/207 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL GK +R + A L+ ++ ++ I +HTA+LL DDV D+S LRRG Sbjct: 142 YLNGHPGKDIRSQMVKAFNAWLDVPSESLEVITKVISMLHTASLLVDDVEDNSVLRRGFP 201 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A + + K+ +A+ S L G+ L L Sbjct: 202 VAHSIFGIPQTINTSNYVYFHALQELQKLKNPKAVSIFSEELLNLHRGQGMDLFWRDTLT 261 Query: 156 -VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN--LGIAFQLVDDVL 212 TE+DYL ++ +KT LF +++ +Q R + + +G+ FQ+ DD Sbjct: 262 CPTEDDYLEMVSNKTGGLFRLGIKL------MQAESRSPVDCVPLVNIIGLIFQIADDYH 315 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + K + ED GK + PVI Sbjct: 316 NLWNREYTANKGMCEDLTEGKFSFPVI 342 >gi|294790967|ref|ZP_06756125.1| probably bifunctional short chain isoprenyl diphosphate synthase [Scardovia inopinata F0304] gi|294458864|gb|EFG27217.1| probably bifunctional short chain isoprenyl diphosphate synthase [Scardovia inopinata F0304] Length = 392 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 42/294 (14%) Query: 41 GGKRLRPMLTLATALMLEYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GGKRLR L A A D + + LACA+E TA L+HDD++DDS RRG +A Sbjct: 57 GGKRLRAQLLGAVAQACGLSADLMPSALDLACALEIFQTAALVHDDIIDDSDTRRGAPSA 116 Query: 98 RLVWGNQT------------------------SVLVGDFLLSQAFCMVIETKSQ-----E 128 N+T +++GD L + + + + Q Sbjct: 117 HRALANETGPEENLEKNSENNSEEKNHIGIGLGIMLGDILATLSVDVAHRSSRQFPQSYA 176 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT------AVLFSAALEVSSL 182 LEA + + +G++ L++ ++L +T+ D + +T + A L ++ + Sbjct: 177 LLEAFLDMHRQVEKGQIMDLAM-ESLPLTDPDLIEDQAKQTYWWKTSSYTTIAPLRLALI 235 Query: 183 IAGVQNSVRQAL-KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 G ++ G LG+AFQL DDV+D + GK +G D GK T+ + Sbjct: 236 ACGYDPHTASSIAHQVGTPLGLAFQLNDDVIDIISLTS--GKPLGGDIIEGKRTVLLADT 293 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 + ++ +K + G+ + ++ +M+ A+ + +R +AK Sbjct: 294 LRSCSQEQKTLLLRIYSSGRPQPDAVQDVISLMQSCGAIDKSRHRIALLNHQAK 347 >gi|62959213|gb|AAY23714.1| farnesyl diphosphate synthase [Synechococcus sp. WH 5701] Length = 145 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 10/143 (6%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-- 136 HDD+ +D+ LR+GK V+G ++L GD LLS AF V T A L ++ Sbjct: 1 HDDLPGMDNDDLRQGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLLQVIVR 60 Query: 137 ------ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A L G++ L DV+ E + KT L + +++AG + Sbjct: 61 LGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPEE 120 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 Q L Y N+G+AFQ+VDD+LD Sbjct: 121 VQLLSRYAQNIGLAFQVVDDILD 143 >gi|316972597|gb|EFV56270.1| octaprenyl pyrophosphate synthase / phytoene synthase [Trichinella spiralis] Length = 272 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 1/181 (0%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D +A E IHTA+L+HDDVVDDS RR G +T+ GD +L++A ++ Sbjct: 85 DAQYKIAMIAEMIHTASLVHDDVVDDSDRRRNIPTVNATHGYKTATFFGDIILAKATILL 144 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + E + +S + L +GEL Q+ + +YL KT LFS +L+ ++ Sbjct: 145 TSINNAEVISIVSKILDDLVKGELIQMESGSDESRLFSEYLTKCYKKTGSLFSNSLKAAA 204 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG-EVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + + +G N G+ FQLVDD+LD+ + +GK D + G T PV+ Sbjct: 205 VLANCSELCVKNVYQFGRNFGLMFQLVDDLLDFCSVDSTTLGKPSRVDLQLGIVTAPVLF 264 Query: 241 A 241 A Sbjct: 265 A 265 >gi|108799219|ref|YP_639416.1| polyprenyl synthetase [Mycobacterium sp. MCS] gi|119868335|ref|YP_938287.1| polyprenyl synthetase [Mycobacterium sp. KMS] gi|108769638|gb|ABG08360.1| Polyprenyl synthetase [Mycobacterium sp. MCS] gi|119694424|gb|ABL91497.1| Polyprenyl synthetase [Mycobacterium sp. KMS] Length = 418 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 74/269 (27%), Positives = 119/269 (44%), Gaps = 30/269 (11%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH----VLLACAIEFIH 75 L+ I ++ + + + + SGGKRLRP A + D + LA A+E +H Sbjct: 81 LRSIDENLGTVAALCQSAVQSGGKRLRPRFAY-WAWRVGAPADAAPQPLIRLAAALELLH 139 Query: 76 TATLLHDDVVDDSALRRGKVAARLV----------WGNQT------SVLVGDFLLSQAF- 118 A L+HDDV+D S +RRG+ + R WG+ T ++LVGD L S A Sbjct: 140 AAILVHDDVIDASEVRRGQPSVRAALTAGHRRDAGWGDATDFGDNMALLVGDLLWSAAHD 199 Query: 119 ------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT-AV 171 + +Q A + + G+L +L D + +++ KT A Sbjct: 200 TFDDAVAGLPAGIAQRTSRAFRTMRVEVLAGQLLELRAQAGRDYHADTAEKILRYKTSAY 259 Query: 172 LFSAALEVSSLIAG-VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 +E+ +AG + Q L+ Y +G AFQL DD+ D G GK G+D R Sbjct: 260 TVERPVELGLELAGSASPATAQTLRDYAGAVGQAFQLRDDLADLFGTTKTSGKRTGDDIR 319 Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTIND 259 GKPT + A++ +++ + + D Sbjct: 320 AGKPTELLGAAYELADDLDRSLLATIVGD 348 >gi|88856502|ref|ZP_01131159.1| geranylgeranyl pyrophosphate synthase [marine actinobacterium PHSC20C1] gi|88814156|gb|EAR24021.1| geranylgeranyl pyrophosphate synthase [marine actinobacterium PHSC20C1] Length = 372 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 122/301 (40%), Gaps = 63/301 (20%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALMLEYRG--DNHV-------- 65 L I ++ + DV L+ SGGKR R + A A + G D+ V Sbjct: 26 LNSIAPELTAMTDVGGSLL-SGGKRFRALFCYWGWQAVAGLPSSTGPLDSEVKSEELPGV 84 Query: 66 -LLACAIEFIHTATLLHDDVVDDSALRRGKVAARL---------VW-GN-----QTSVLV 109 L A A+E H A L+HDD++D S RRG +A W GN Q++ L+ Sbjct: 85 LLSASALELFHAAALVHDDIMDRSDTRRGSPSAHRRFEQMHRDGAWTGNAETYGQSAALL 144 Query: 110 --------GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161 D LL + M+ + A + + G+ LD+ +E Sbjct: 145 LGDLLLGWSDELLGRGLAMLPRPAALAARREFMTMRTEVMAGQY--------LDIHDESA 196 Query: 162 LHVIKSKTA--------VLFSAALEV-------SSLIAGVQNSVRQALKSYGMNLGIAFQ 206 A + SA V +SL AG + + AL+++G+ LG+AFQ Sbjct: 197 WASYPESEALDRAQRVLIYKSAKYSVEAPLAVGASLGAGTEEQI-AALRAFGLPLGVAFQ 255 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVEN 266 L DDVL G+ GK G+D R GK T + +A Q+ + + D +S E Sbjct: 256 LRDDVLGIFGDPERTGKPAGDDLREGKRTAIIAIARQKLSTSANAILDELLGDPDLSTEQ 315 Query: 267 L 267 + Sbjct: 316 V 316 >gi|239933102|ref|ZP_04690055.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces ghanaensis ATCC 14672] Length = 463 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 75/240 (31%), Positives = 97/240 (40%), Gaps = 50/240 (20%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-----AIEFIHTATLLHDDVVDDS 88 V +GGKR+RP T L GD + A A+E + T L+HDDV+D S Sbjct: 99 VARFTRTGGKRVRPRFVWWT-LRACGGGDGPSVAAALRIGAALELLQTCALVHDDVMDGS 157 Query: 89 ALRRGK------VAARLVW----------GNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 LRR + VAA+ G ++L GD L+ A ++ ET L Sbjct: 158 TLRRARPALHVDVAAQYGGAAPSARAERLGGAAAILAGDLALAWADDLLAETP----LAP 213 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT-----------AVLFSAALEVSS 181 S A +R+L ++ YL V T A L SA V Sbjct: 214 RSARA-------VRRLWADMRTEMVAGQYLDVHGQATGSRSLPRALHAACLKSALYSVER 266 Query: 182 LIAGVQNS------VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 IA R+AL S G G+AFQL DD+ D G+ GK G D R GKPT Sbjct: 267 PIALGAALADADDATREALGSAGRCAGLAFQLRDDLDDVFGDPRHTGKPAGGDIREGKPT 326 >gi|284991729|ref|YP_003410283.1| polyprenyl synthetase [Geodermatophilus obscurus DSM 43160] gi|284064974|gb|ADB75912.1| Polyprenyl synthetase [Geodermatophilus obscurus DSM 43160] Length = 375 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 61/272 (22%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHV 65 TL M++ ++ +C+ + GGKRLRP+ + E G++ Sbjct: 45 TLAAMDESLLPVVDEVCA------------LADGGKRLRPLFAYWGWRGVRGERPGESDA 92 Query: 66 LLACAI---EFIHTATLLHDDVVDDSALRRGKVAARL----------------VWGNQTS 106 + A+ EF+H + L+HDDV+D + RRG+ A + +G + Sbjct: 93 AVLRAVAALEFVHASALVHDDVMDGALTRRGRPATHVGFAARHGDGELAGDGDTFGIGAA 152 Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166 +LVGD L S E L + L+ R + + +VT YL +++ Sbjct: 153 ILVGDLAL---------VWSDELLRRSGISTAALSR--ARTVWDTMRTEVTAGQYLDLLR 201 Query: 167 SK----------TAVLFSAA-------LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + T + +A L++ + IAG + + G+ LG AFQL D Sbjct: 202 AAGGLPGAQGALTVARYKSAGYTVQRPLQLGAAIAGAGPRAAEVYTAIGLPLGEAFQLRD 261 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 DVL G+ GK+ +D R GK TL V LA Sbjct: 262 DVLGVFGDPTVTGKSADDDLREGKQTLLVALA 293 >gi|126434877|ref|YP_001070568.1| polyprenyl synthetase [Mycobacterium sp. JLS] gi|126234677|gb|ABN98077.1| Polyprenyl synthetase [Mycobacterium sp. JLS] Length = 418 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/269 (27%), Positives = 119/269 (44%), Gaps = 30/269 (11%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH----VLLACAIEFIH 75 L+ I ++ + + + + SGGKRLRP A + D + LA A+E +H Sbjct: 81 LRSIDENLGTVAALCQSAVQSGGKRLRPRFAY-WAWRVGAPADAAPQPLIRLAAALELLH 139 Query: 76 TATLLHDDVVDDSALRRGKVAARLV----------WGNQT------SVLVGDFLLSQAF- 118 A L+HDDV+D S +RRG+ + R WG+ T ++LVGD L S A Sbjct: 140 AAILVHDDVIDASEVRRGQPSVRAALTAGHRRDAGWGDATDFGDNMALLVGDLLWSAAHD 199 Query: 119 ------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT-AV 171 + +Q A + + G+L +L D + +++ KT A Sbjct: 200 TFDDAVAGLPAGIAQRTSRAFRTMRVEVLAGQLLELRAQAGRDYHADTAEKILRYKTSAY 259 Query: 172 LFSAALEVSSLIAG-VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 +E+ +AG + Q L+ Y +G AFQL DD+ D G GK G+D R Sbjct: 260 TVERPVELGLELAGSASPATAQTLRDYAGAVGQAFQLRDDLADLFGTTKTSGKRTGDDIR 319 Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTIND 259 GKPT + A++ +++ + + D Sbjct: 320 AGKPTELLGAAYELADDLDRSLLATIVGD 348 >gi|281346909|gb|EFB22493.1| hypothetical protein PANDA_021734 [Ailuropoda melanoleuca] Length = 284 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 K+ GK++R L+ A L+ D ++ E +H A+LL DD+ D+S LRRG Sbjct: 1 KFYSLISGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGF 60 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + N Sbjct: 61 PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQGQGLDIYWRDNY 120 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 121 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGLFFQIRDDYAN 176 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 177 LHSKEYSENKSFCEDLTEGKFSFPTIHA 204 >gi|320168042|gb|EFW44941.1| geranylgeranyl pyrophosphate synthetase [Capsaspora owczarzaki ATCC 30864] Length = 314 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 5/205 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL GK +R +L A + + ++ +H+A+LL DD+ D+S LRRG Sbjct: 16 YLTSVPGKEVRTILIRAFDQWMHIPTKELDEIKGIVQMLHSASLLIDDIEDNSKLRRGVP 75 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQLSLSKNL 154 A L++G +++ ++ A V++ EA+ A + L G+ L N+ Sbjct: 76 VAHLIYGVPSTINCANYAYFLALERVLKLNKPEAVAAFTEELLELHRGQGLDIWWRDSNV 135 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEE+Y ++K KT LF ++ + + +++ L + LG+ FQ+ DD + Sbjct: 136 CPTEEEYREMVKRKTGGLFRLSVRLMQAFSENRSNFVPLLDA----LGLYFQIRDDFANL 191 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVI 239 + K+ ED GK + P+I Sbjct: 192 ESKEYTDNKSFCEDLTEGKFSFPII 216 >gi|313837485|gb|EFS75199.1| polyprenyl synthetase [Propionibacterium acnes HL037PA2] gi|314929303|gb|EFS93134.1| polyprenyl synthetase [Propionibacterium acnes HL044PA1] gi|314971692|gb|EFT15790.1| polyprenyl synthetase [Propionibacterium acnes HL037PA3] gi|328906969|gb|EGG26735.1| geranylgeranyl pyrophosphate synthase [Propionibacterium sp. P08] Length = 365 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 60/264 (22%) Query: 40 SGGKRLRPML-----------TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 GGKRLRP +A + +L+ G ++EF+H + L+HDD++D S Sbjct: 52 GGGKRLRPAFCYWGHVAAAGQPVAPSGLLQAAG--------SLEFLHVSALVHDDLIDHS 103 Query: 89 ALRRGKVAARL----------------VWGNQTSVLVGDFLL---SQAFCMVIETKSQEA 129 RRG +A +G ++L+GD LL SQ F + Sbjct: 104 NTRRGLPSAHRRFEAAHVTAHGDGSAEQFGFDVAILLGDLLLMWSSQMF-------TSAP 156 Query: 130 LEALSLVAC-TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-------VLFSAAL---- 177 +EA L A L + +++ + LDVT + + S++A V + A Sbjct: 157 VEADRLAAAIPLFDAMRTEVTCGQVLDVTSQSGMAGSDSESALDLVGRVVEYKCASYTVV 216 Query: 178 ---EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 ++ +AG + ++Q + +G +G AFQ DD+L G+ GK G+D R GK Sbjct: 217 RPSQIGVALAGGSSRLQQTMADFGSPIGRAFQYRDDLLGVFGDAELTGKPAGDDLREGKR 276 Query: 235 TLPVILAFQRGTKREKNFWKSTIN 258 T+ V A + + KS + Sbjct: 277 TVLVAHALNQADSGDAARLKSLLG 300 >gi|291441451|ref|ZP_06580841.1| geranylgeranyl pyrophosphase synthase [Streptomyces ghanaensis ATCC 14672] gi|291344346|gb|EFE71302.1| geranylgeranyl pyrophosphase synthase [Streptomyces ghanaensis ATCC 14672] Length = 453 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 105/234 (44%), Gaps = 38/234 (16%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-----AIEFIHTATLLHDDVVDDS 88 V +GGKR+RP T L GD + A A+E + T L+HDDV+D S Sbjct: 89 VARFTRTGGKRVRPRFVWWT-LRACGGGDGPSVAAALRIGAALELLQTCALVHDDVMDGS 147 Query: 89 ALRRGK------VAARLVW----------GNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 LRR + VAA+ G ++L GD L+ A ++ ET L Sbjct: 148 TLRRARPALHVDVAAQYGGAAPSARAERLGGAAAILAGDLALAWADDLLAETP----LAP 203 Query: 133 LSLVACTLAEGELR-QLSLSKNLDVTEE--------DYLHVIKSKTAVLFSA--ALEVSS 181 S A ++R ++ + LDV + LH K+A L+S + + + Sbjct: 204 RSARAVRRLWADMRTEMVAGQYLDVHGQATGSRSLPRALHAACLKSA-LYSVERPIALGA 262 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +A ++ R+AL S G G+AFQL DD+ D G+ GK G D R GKPT Sbjct: 263 ALADADDATREALGSAGRCAGLAFQLRDDLDDVFGDPRHTGKPAGGDIREGKPT 316 >gi|221116455|ref|XP_002156744.1| PREDICTED: similar to Pdss1 protein, partial [Hydra magnipapillata] Length = 199 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 7/110 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV-LLACAI------EFIHTATLLHDDV 84 + + Y + GK RP+L + A L N LL C + E IHTA+LLHDDV Sbjct: 82 ECIHYYFDNEGKLFRPVLIVLMAKALNVHQQNTSDLLECQLKMAMIAEMIHTASLLHDDV 141 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 +DD+ LRR K + ++ ++ S+L GDF+L++A ++ ++ + +E S Sbjct: 142 IDDAVLRRNKPSVNQIFSSKQSILAGDFILARASILLSRLQNTKVVEFFS 191 >gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp. lyrata] gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp. lyrata] Length = 310 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 18/195 (9%) Query: 32 DVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VD 86 + ++Y + + G KR P++ +A + + GD ACA+E +H A+L+HDD+ +D Sbjct: 65 EAMRYSVLAQGAKRASPVMCVAACEL--FGGDRLAAFPTACALEMVHAASLIHDDLPCMD 122 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------ALEALSLVACTL 140 D +RRGK + V+G+ ++L GD L F ++ E L ++ +A T+ Sbjct: 123 DDPVRRGKPSNHTVYGSGIALLAGDALFPLGFHHIVSHTPPELVPRATILRVIAEIARTV 182 Query: 141 AEGELRQLSLSKNLDVTEEDYLH--VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 ++ + +D+ + V + K + + L+ G ++L+ YG Sbjct: 183 GS---TGMAAGQYVDLEGGPFPPSFVQEKKFGAMGECSAVCGGLLGGATEDELESLRRYG 239 Query: 199 MNLGIAFQLVDDVLD 213 +G+ +Q VDD+ + Sbjct: 240 RAVGMLYQAVDDITE 254 >gi|168070550|ref|XP_001786852.1| predicted protein [Physcomitrella patens subsp. patens] gi|162660326|gb|EDQ48334.1| predicted protein [Physcomitrella patens subsp. patens] Length = 367 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 1/96 (1%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 + SDV + + + L+ +GGKR+RP L + L + LA A+E +H+ATLLHD Sbjct: 272 VQSDVLFVRLIHQDLVTAGGKRIRPRLVFLASRALG-GAPFEMELALAVELLHSATLLHD 330 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 D++DD+ RRGK AA +GN SVL G F +F Sbjct: 331 DLIDDAETRRGKEAAFRKYGNAVSVLSGIFSFRGSF 366 >gi|226227273|ref|YP_002761379.1| geranyltranstransferase [Gemmatimonas aurantiaca T-27] gi|226090464|dbj|BAH38909.1| geranyltranstransferase [Gemmatimonas aurantiaca T-27] Length = 307 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 101/240 (42%), Gaps = 35/240 (14%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + V+Y + GKRLR +L + GD LA +IE +H +L+HDD+ Sbjct: 46 EAVRYALLGEGKRLRAILLIEAYRACGGTGDA-ADLAASIEVVHAYSLVHDDLPCMDDDD 104 Query: 90 LRRGK---------------------VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +RRG+ +AAR W ++ + D + ++E Sbjct: 105 MRRGRPTVHKVHGVGVATAAGLAMVPLAARSAWHASKALGLSDVVAGDIVRELMEASGGG 164 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + L+ E E LSL E V + KT L A++ + + A Sbjct: 165 GMIGGQLLDL---EAEGAPLSL--------ESLERVHRLKTGALIRASVTLGARAALAPE 213 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + R AL YG ++G+AFQ+ DDVLD +E+GK G D K T P +L + +R Sbjct: 214 ARRHALDRYGASIGLAFQIADDVLDVTATTDELGKTAGRDLDLQKSTYPALLGVEGAIQR 273 >gi|225428131|ref|XP_002281076.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|225467464|ref|XP_002264102.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 341 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 26/202 (12%) Query: 28 EMIPDVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV 84 + I + ++Y + + GGKR P++ +A + + GD ACA+E +H A+L+HDD+ Sbjct: 75 QQIYEAMRYSVLAKGGKRAPPVMCVAVCEL--FGGDRLAAFPTACALEMVHAASLIHDDL 132 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALE---------- 131 +DD RRG+ + V+G ++L GD L F ++ T S E Sbjct: 133 PCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEI 192 Query: 132 ALSLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A S+ + +A G+ L + N +D + + +AV + G + Sbjct: 193 ARSVGSTGMAAGQFLDLEGAPNSVDFVQRKKFGEMAECSAV-------CGGFLGGAADDD 245 Query: 191 RQALKSYGMNLGIAFQLVDDVL 212 L+ YG +G+ +Q+VDDVL Sbjct: 246 ILRLRRYGRAVGMLYQVVDDVL 267 >gi|119483962|ref|XP_001261884.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Neosartorya fischeri NRRL 181] gi|119410040|gb|EAW19987.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Neosartorya fischeri NRRL 181] Length = 357 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 5/220 (2%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 +R ++ ++I + YL GK +R L A L+ D ++ + +H+A+LL Sbjct: 62 QRKLTEEKIIWAPLDYLCSFPGKDIRGKLISAFNQWLQIPEDKLDVIKRVVGLLHSASLL 121 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 DD+ D S LRRG A ++G ++ +F A + + EA+ + L Sbjct: 122 IDDIQDSSKLRRGFPVAHSIFGIAQTINSANFAYFWAQQELKKLGKPEAMVIFTEEMLRL 181 Query: 141 AEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ L +L TEE+YL ++ +KT LF A+++ + + QN+ + + + Sbjct: 182 HRGQGLDLYWRDSLTCPTEEEYLEMVANKTGGLFRLAIKLMQMES--QNT-KDCVPLVDL 238 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 LGI FQ+ DD + + ++ K GED GK + PVI Sbjct: 239 -LGIIFQIRDDYQNLQSDLYAKNKGFGEDITEGKFSYPVI 277 >gi|88607980|ref|YP_506571.1| putative geranyltranstransferase [Neorickettsia sennetsu str. Miyayama] gi|88600149|gb|ABD45617.1| putative geranyltranstransferase [Neorickettsia sennetsu str. Miyayama] Length = 256 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 26/218 (11%) Query: 10 KDMEKVNFLILKRICSDVEMIPD------VVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 K ++K + LI + + ++ + P ++Y + + +R L L + + Sbjct: 5 KKLQKASRLIRETLKENLSLFPSEDKLFQAIRYSLLAESSHIRGFLVLELGTLFNIPYVD 64 Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + +A AIE IH+ +L+HDD+ +D+S RR + A + + T++L GD LL A+ M+ Sbjct: 65 TIEVAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQML 124 Query: 122 IETKSQEALEALSLVACT------LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 + LV CT + G++ + S L E + K K+ LF+ Sbjct: 125 -------SRYGTPLVQCTSKYVLEMITGQVHDVIGSSTLTADE-----INKMKSGSLFAL 172 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 + +A S L+++G +GI FQ VDD+ D Sbjct: 173 SCSSVGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210 >gi|149032543|gb|EDL87421.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Rattus norvegicus] Length = 267 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + Sbjct: 77 PVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDTY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|296171238|ref|ZP_06852642.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894206|gb|EFG73963.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 429 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 92/226 (40%), Gaps = 22/226 (9%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 SGGK LR L G+ + A + E +H LL DDV+D SA RRG+ +A L Sbjct: 124 SGGKCLRSTFVYLGWLCGAAPGEAALRAAASFELLHVFALLQDDVMDGSAERRGRPSAHL 183 Query: 100 ---VW-------------GNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVAC 138 W G ++L+GD L + M+ E T+ A + Sbjct: 184 RFARWHRERGLSGSSRRFGESAAILLGDLCLIWSEQMLRESGVDSTRLHRAWPRYDTMRT 243 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSY 197 LA G+ L+ + E L V + K+ LE+ + ++ + L Y Sbjct: 244 ELAVGQFADLTSDVRQMPSLEAVLDVARRKSGNYTVRRPLEIGAAMSDCDDRTLTQLGRY 303 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G +G AFQL DDVL G GK D R K T V+ A Q Sbjct: 304 GAAVGEAFQLRDDVLGVFGSPATTGKPCAGDLRERKATSLVVTAHQ 349 >gi|242774766|ref|XP_002478507.1| geranylgeranyl diphosphate synthase [Talaromyces stipitatus ATCC 10500] gi|218722126|gb|EED21544.1| geranylgeranyl diphosphate synthase [Talaromyces stipitatus ATCC 10500] Length = 392 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 5/209 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK +R + A L+ + ++ + +H A+LL DDV D+S LRRG Sbjct: 94 YISKQPGKDIRKQMIAAFNAWLKVPESSLAIITKVVAMLHNASLLIDDVEDNSVLRRGIP 153 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + S A++ + L +G+ L L Sbjct: 154 VAHNIFGTAQTINSANYVYFLALQEVRKLNSVTAMDIYTEELLNLHKGQGMDLFWRDTLT 213 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEE+YL ++ +KT LF A++ L+ ++ R + + +G+ FQ+ DD L+ Sbjct: 214 CPTEEEYLEMVDNKTGGLFRLAVK---LMQAESDTGRDCVPLVNV-MGLIFQICDDYLNL 269 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + K + ED GK + P+I + + Sbjct: 270 SDKTYSKNKGLCEDLTEGKFSFPIIHSIR 298 >gi|56090562|ref|NP_001007627.1| geranylgeranyl pyrophosphate synthase [Rattus norvegicus] gi|81891588|sp|Q6F596|GGPPS_RAT RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|50428383|dbj|BAD30051.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus] gi|50428385|dbj|BAD30052.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus] gi|50428387|dbj|BAD30053.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus] gi|50428389|dbj|BAD30054.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus] gi|59861856|gb|AAH90327.1| Geranylgeranyl diphosphate synthase 1 [Rattus norvegicus] Length = 300 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + Sbjct: 77 PVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDTY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|83773087|dbj|BAE63215.1| unnamed protein product [Aspergillus oryzae] Length = 303 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 5/214 (2%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 +++I V YL+ GK +R L A L D ++A + +HTA+LL DD+ D Sbjct: 8 MQIIRGPVDYLLKCPGKDIRRKLMQAFNEWLRIPEDRLNIIAEIVGLLHTASLLIDDIQD 67 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 S LRRG A ++G ++ ++ A + E +A E + L G+ Sbjct: 68 SSKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIFTEELLRLHRGQGM 127 Query: 147 QLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 L +L TEE+Y+ +I +KT LF A+++ L + V + + LGI F Sbjct: 128 DLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKLMQLESEVTSDFLGLVDL----LGIIF 183 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 Q+ DD + + ++ K ED GK + +I Sbjct: 184 QIRDDYQNLQSDLYSKNKGFCEDLTEGKFSFLII 217 >gi|300785964|ref|YP_003766255.1| polyprenyl synthetase [Amycolatopsis mediterranei U32] gi|299795478|gb|ADJ45853.1| polyprenyl synthetase [Amycolatopsis mediterranei U32] Length = 367 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 107/245 (43%), Gaps = 31/245 (12%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 +P+ V +GGK LRP+ + D V A A+E +H L+ DDV+D SA Sbjct: 57 VPEFV-----AGGKCLRPLFAYVGWRCGQPESDAAVRAAAALELLHCFALVQDDVMDGSA 111 Query: 90 LRRGKVA-----ARL----VW-------GNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 LRRG+ A AR W G ++L GD L + M+ E S A E L Sbjct: 112 LRRGRTALHVRFARWHEEQGWAGSAPRFGESAAILFGDLFLVWSEQMLRE--SGLAAEQL 169 Query: 134 S-------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAG 185 + + LA G+L L + + L V++ K+ LE + +AG Sbjct: 170 ARGWGHYDAMRAELAVGQLADLVNDARALPSWDTLLDVLRRKSGNYTVRRPLEFGAALAG 229 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + L +G +G AFQL DD+L G+ GK G+D R K + V+LA Sbjct: 230 CGPELMAGLGEFGGLVGEAFQLRDDLLGVFGDPAVTGKPAGQDLRERKASSVVVLAAAMA 289 Query: 246 TKREK 250 +R + Sbjct: 290 DRRRQ 294 >gi|319440242|ref|ZP_07989398.1| putative polyprenyl diphosphate synthase [Corynebacterium variabile DSM 44702] Length = 373 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 34/244 (13%) Query: 32 DVVKYLIFSGGKRLRPMLTLA----------TALMLEYRGDNHVLLACAIEFIHTATLLH 81 D ++ + GGKRLRP+ A L ++ + ++EFI L+H Sbjct: 48 DALEQFVTGGGKRLRPLFAWAGVRAALDGGGGTLSGSTGPEDLLRAVGSLEFIQACALIH 107 Query: 82 DDVVDDSALRRGKVAAR----------------LVWGNQTSVLVGDFLLSQAFCMVIETK 125 DD++D S RRG+ + +G ++LVGD + A M++++ Sbjct: 108 DDIIDHSDTRRGRPTTHRRFEASHRGNGWSGDAVGYGESQAILVGDLAFAWADDMLVDSG 167 Query: 126 SQ-----EALEALSLVACTLAEGELRQLSL--SKNLDVTEEDYLHVIKSKTAVLFSAALE 178 A E + + G++ ++L S + D + ++ K+ A L Sbjct: 168 VDAASLARAREPWRKMRTEVIAGQMLDIALENSGSEDPAMSEKVNTYKT-AAYTVERPLH 226 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + + L++ G +GIAFQL DD L G+ GK G+D R+GK T V Sbjct: 227 LGAALGDADARTVDLLRTAGREIGIAFQLEDDHLGVFGDPQVTGKAAGDDLRSGKRTWLV 286 Query: 239 ILAF 242 + A Sbjct: 287 MRAL 290 >gi|226290540|gb|EEH46024.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides brasiliensis Pb18] Length = 407 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 5/209 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK +R L A L ++ ++ + +HTA+LL DDV D S LRRG Sbjct: 101 YMVQQPGKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLVDDVEDSSNLRRGVP 160 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + ++ A++ L G+ + L Sbjct: 161 VAHNIFGTAQTINSANYVYFLALGEVQKLRNPNAIDVYVKELLNLHRGQGMDVFWRDTLT 220 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEE+YL ++ +KT LF A+++ +G + AL + +G+ FQ+ DD L+ Sbjct: 221 CPTEEEYLDMVGNKTGGLFRLAIKLMQAESGTEIDC-VALANL---MGLIFQICDDYLNL 276 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 K + ED GK + P+I + + Sbjct: 277 SNSTYTKNKGLCEDLTEGKFSFPIIHSIR 305 >gi|295656234|gb|AAK11525.2|AF279807_1 geranylgeranyl pyrophosphate synthase [Penicillium paxilli] Length = 375 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 5/209 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK +R L A L+ ++ +++ + +HTA+LL DDV D+S LRRG Sbjct: 82 YMHQHPGKDVRTQLIQAFNSWLQVPPESLAIISKVVTMLHTASLLIDDVEDNSVLRRGVP 141 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A + + K+ A++ L G+ L L Sbjct: 142 VAHNIFGTAQTINSANYVYFLALQEIQQLKNPAAIDIYVKELLNLHRGQGMDLFWRDTLT 201 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TE++YL ++ +KT LF A++ + ++S + S +G+ FQ+ DD L+ Sbjct: 202 CPTEDEYLEMVGNKTGGLFRLAVK----LMQAESSTGKDCVSLVNVMGLIFQICDDYLNL 257 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 K + ED GK + P+I + + Sbjct: 258 SNTTYTHNKGLCEDLTEGKFSFPIIHSIR 286 >gi|327292126|ref|XP_003230771.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like, partial [Anolis carolinensis] Length = 137 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 57/108 (52%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A E IHTA+L+HDDV+DD+ RRGK+ VWG + +VL GDF+L+ A + + Sbjct: 25 IALIAEMIHTASLVHDDVIDDANSRRGKLTVNHVWGERKAVLAGDFILAVASQTLARIGN 84 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 + L+ L GE QL +N + YL KTA L + Sbjct: 85 TTIVSVLTRAIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIA 132 >gi|212532131|ref|XP_002146222.1| geranylgeranyl diphosphate synthase [Penicillium marneffei ATCC 18224] gi|210071586|gb|EEA25675.1| geranylgeranyl diphosphate synthase [Penicillium marneffei ATCC 18224] Length = 396 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 5/209 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK +R + A L+ + ++ + +H A+LL DDV D+S LRRG Sbjct: 98 YISKQPGKDIRKQMIAAFNAWLKVPEQSLEIITSVVAMLHNASLLIDDVEDNSVLRRGIP 157 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A + + S A+E + L +G+ L L Sbjct: 158 VAHNIFGTAQTINSANYVYFLALQELRKLNSPAAIEIYTEELLNLHKGQGMDLFWRDTLT 217 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEE+YL ++ +KT LF A++ L+ + + + + LG+ FQ+ DD L+ Sbjct: 218 CPTEEEYLEMVDNKTGGLFRLAVK---LMQAESEAGKDCVPLVNI-LGLIFQICDDYLNL 273 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + K + ED GK + P+I + + Sbjct: 274 SDKTYNKNKGLCEDLTEGKFSFPIIHSIR 302 >gi|118468511|ref|YP_888517.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155] gi|118169798|gb|ABK70694.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155] Length = 362 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 35/234 (14%) Query: 34 VKYLIFSGGKRLRP---------MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 V+ + GGKR+RP ++ A A+ G + + L A+E + L+HDDV Sbjct: 44 VEEFVLRGGKRVRPAFAYWGWRSVIEPADAVA----GPDVLRLFSALELLQACALIHDDV 99 Query: 85 VDDSALRRG-KVAARLV--------W-------GNQTSVLVGDFLLSQAFCMV----IET 124 +DDSA RRG RL W G ++L GD LS A +V + Sbjct: 100 IDDSATRRGLPTVHRLFTEQHHERGWLGSERQFGLSAAILAGDLALSWADDIVAGADLPV 159 Query: 125 KSQEALEAL-SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA-ALEVSSL 182 + ++ + + + G+ + + D + L+V KTA A L++ + Sbjct: 160 DAHRRVQTVWRHIRTEVLGGQYLDIVTESSGDESVASALNVNTFKTASYTVARPLQLGAA 219 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 A + V++ G +LG+AFQL DDVL G+ GK G+D R+GK T+ Sbjct: 220 AAADRPDVQELFHRIGNDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTV 273 >gi|317150999|ref|XP_001824349.2| hypothetical protein AOR_1_1410094 [Aspergillus oryzae RIB40] Length = 585 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 5/219 (2%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 R+ ++I V YL+ GK +R L A L D ++A + +HTA+LL Sbjct: 293 RVIQSDQIIRGPVDYLLKCPGKDIRRKLMQAFNEWLRIPEDRLNIIAEIVGLLHTASLLI 352 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DD+ D S LRRG A ++G ++ ++ A + E +A E + L Sbjct: 353 DDIQDSSKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIFTEELLRLH 412 Query: 142 EGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ L +L TEE+Y+ +I +KT LF A+++ L + V + + Sbjct: 413 RGQGMDLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKLMQLESEVTSDFLGLVDL---- 468 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 LGI FQ+ DD + + ++ K ED GK + +I Sbjct: 469 LGIIFQIRDDYQNLQSDLYSKNKGFCEDLTEGKFSFLII 507 >gi|186704302|dbj|BAG30960.1| geranylgeranyl diphosphate synthase [Phomopsis amygdali] Length = 424 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 13/215 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ + GK R ++ A ++ ++ + +HT++LL DD+ D+S LRRG+ Sbjct: 140 YVASNSGKEFRTLILNAFNAWFRVPPESLTIICDVVRMLHTSSLLIDDIQDNSLLRRGRP 199 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEALEALSLVACTLAEGELRQLSLS 151 A ++G ++ G+++ F E + ALE + L G+ ++L Sbjct: 200 VAHSIYGVAQTINTGNYVY---FLAAKELNKLRNAASALEVFTAEMLNLHRGQGQELYWR 256 Query: 152 KNLDV-TEEDYLHVIKSKTAVLFSAALEV--SSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 L TE++YL ++ +KT LF A+++ + AG V L LG+ +Q+ Sbjct: 257 DTLKCPTEDEYLKMVSNKTGGLFRMAVKLMQAESPAGPMAPVCDKLVQL---LGLVYQIA 313 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 DD + K ED GK + PV+ + Q Sbjct: 314 DDYKNLTAVEYTTSKGFCEDLTEGKFSFPVVHSIQ 348 >gi|289811565|ref|ZP_06542194.1| hypothetical protein Salmonellaentericaenterica_47552 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 77 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 51/75 (68%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIH 75 G+ HV +A IEFIH Sbjct: 63 GNAHVTIAALIEFIH 77 >gi|207109676|ref|ZP_03243838.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori HPKX_438_CA4C1] Length = 166 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 75/139 (53%), Gaps = 5/139 (3%) Query: 69 CAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 CAI E I TA+LLHDDV+D + +RR + ++GN +V++GD S+AF + + Sbjct: 32 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAF-FELSKMGE 90 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +ALS L+ GE+ + + + + ++ Y +++ KTA A+L+ +++ Sbjct: 91 SIAKALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILLDKN 150 Query: 188 NSVRQALKSYGMNLGIAFQ 206 + +G+N G+ F+ Sbjct: 151 AKIYA---DFGLNFGMRFK 166 >gi|260103263|ref|ZP_05753500.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM 20075] gi|260082932|gb|EEW67052.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM 20075] Length = 92 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 54/88 (61%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 +GGK LRP L L A ++ + LA +IE +H ATL+HDD +DDS LRRG ++ + Sbjct: 4 NGGKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHDDTIDDSDLRRGNISIQA 63 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 +G +V G+ L + F ++++T ++ Sbjct: 64 EFGKDVAVYAGNLLFTNFFDLMLDTTTE 91 >gi|47229030|emb|CAG09545.1| unnamed protein product [Tetraodon nigroviridis] Length = 299 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L D ++ E +H A+LL DD+ D S LRRG Sbjct: 18 KYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIRVTEMLHNASLLIDDIEDSSKLRRGF 77 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ EA+ + L G+ + Sbjct: 78 PVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPEAVRVFTRQLLELHRGQGLDIHWRDTY 137 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TE++Y +++ KT LF A+ + L + +Q LK LG+ FQ+ DD + Sbjct: 138 TCPTEQEYRNMVLQKTGGLFGLAVGLMQLFS----DWKQDLKPLLDTLGLFFQIRDDYAN 193 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 K+ ED GK + P+I A Sbjct: 194 LSSREYSDNKSFCEDLTEGKFSFPIIHA 221 >gi|70982877|ref|XP_746966.1| geranylgeranyl pyrophosphate synthetase AtmG [Aspergillus fumigatus Af293] gi|66844591|gb|EAL84928.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus fumigatus Af293] gi|159123850|gb|EDP48969.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus fumigatus A1163] Length = 357 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 8/263 (3%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 +R +D ++I + YL GK +R L A L+ D ++ + +H+A+LL Sbjct: 62 QRKLADDKIIWAPLDYLCSFPGKDIRGKLISAFNQWLQIPEDKLDVIKRVVGLLHSASLL 121 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 DD+ D S LRRG A ++G ++ +F A + + EA+ + L Sbjct: 122 IDDIQDSSKLRRGFPVAHSIFGIAQTINSANFAYFWAQQELKKLGKPEAMVIFTEEMLRL 181 Query: 141 AEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ L +L TEE+YL ++ +KT LF A+++ + + ++ + + Sbjct: 182 HRGQGLDLYWRDSLTCPTEEEYLEMVANKTGGLFRLAIKLMQMES---HNTEDCVPLVDL 238 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 LGI FQ+ DD + + ++ K GED GK + P+I + + NF I Sbjct: 239 -LGIIFQIRDDYQNLQSDLYAKNKGFGEDITEGKFSYPIIHSIRSDP---SNFQLMNILK 294 Query: 260 GKISVENLKKAFIIMRENRALVD 282 K E++K+ + + E+ D Sbjct: 295 QKTEDEDVKRYAVRIIESTGSFD 317 >gi|157165525|ref|YP_001467681.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP synthase) [Campylobacter concisus 13826] gi|112800771|gb|EAT98115.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Campylobacter concisus 13826] Length = 299 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 33/240 (13%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 +GGK R +L L ++ + +A +E +HT +L+HDD+ +D+++LRRG Sbjct: 35 AGGKHFRALLLLGVVENVDKSLTQKAMRVALGLEMMHTYSLIHDDLPSMDNASLRRGTPT 94 Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMV-------------IETKSQEA-------LEALSLV 136 + + T++L GD L + AF + +E SQ A +AL Sbjct: 95 LHVTYDETTAILAGDALNTHAFYEISRADLPADTRIKCVEILSQNAGVSGMVLGQALDCF 154 Query: 137 ACTLAEGELR----QLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + +++ + LS K L + E +LH+ KTA L +A+L++ ++I + Sbjct: 155 FENTNKEDIKRAKAKFGLSGKMLSLDELVFLHI--HKTAKLIAASLKMGAVIVNLDEKEC 212 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + G+ LG+AFQ+ DD++D + GK + D K + +L G K++K+ Sbjct: 213 DKIYDIGLKLGLAFQIQDDIIDLTSDEAAAGKPVHNDL--AKNSFTNLLGLS-GAKKKKD 269 >gi|288917476|ref|ZP_06411842.1| Farnesyltranstransferase [Frankia sp. EUN1f] gi|288351179|gb|EFC85390.1| Farnesyltranstransferase [Frankia sp. EUN1f] Length = 860 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 18/209 (8%) Query: 36 YLIFSGGKRLRPMLTL--ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV--DDSALR 91 Y + KRLRP+LTL A L + R +L A E HTA+LL DD+ D++ R Sbjct: 602 YALGGHAKRLRPVLTLMLAEGLRVPTRAIEPLLAAS--ELFHTASLLLDDLPAQDNATTR 659 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ----EALEALSLVACTLAE----- 142 RG+ A V+ + L ++S F + +E ++ TL Sbjct: 660 RGRPTAHRVFDEGSVQLAAVSMISSGFGQLARLHEHFPPVRVVEVVAYAGSTLGPERLCR 719 Query: 143 GELRQLSLSKNLD---VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ L L++ D VT D L + + K++ AAL ++ G + ++ Y Sbjct: 720 GQNLDLHLARRADDRPVTGTDILEMYRLKSSTSIEAALVPLMMLLGRPDREISLVERYAR 779 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 + GI FQ+ DDVLD + +GK+ G D Sbjct: 780 HAGIVFQIRDDVLDLTAADDLLGKDTGHD 808 >gi|225678401|gb|EEH16685.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides brasiliensis Pb03] Length = 407 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 5/209 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK +R L A L ++ ++ + +HTA+LL DDV D S LRRG Sbjct: 101 YMVQQPGKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLVDDVEDSSNLRRGVP 160 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + ++ A++ L G+ + L Sbjct: 161 VAHNIFGTAQTINSANYVYFLALEEVQKLRNPNAIDVYVKELLNLHRGQGMDVFWRDTLT 220 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEE+YL ++ +KT LF A+++ +G + AL + +G+ FQ+ DD L+ Sbjct: 221 CPTEEEYLDMVGNKTGGLFRLAIKLMQAESGTEIDC-VALANL---MGLIFQICDDYLNL 276 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 K + ED GK + P+I + + Sbjct: 277 SNSTYTKNKGLCEDLTEGKFSFPIIHSIR 305 >gi|229819467|ref|YP_002880993.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333] gi|229565380|gb|ACQ79231.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333] Length = 366 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/241 (32%), Positives = 109/241 (45%), Gaps = 37/241 (15%) Query: 41 GGKRLRPMLTLATALML-EYRGDNH----------VLLACAIEFIHTATLLHDDVVDDSA 89 GGKR+RP L LA L + G H V +A A E +H A LLHDDV+D Sbjct: 52 GGKRVRPALVLAAFHGLRDDAGPGHEEGDPDGGAAVQVAAAFELLHAAFLLHDDVIDGDL 111 Query: 90 LRRGK--VAARLV---------------WGNQTSVLVGDFLLSQAFCMVI--ETKSQEAL 130 +RRG+ + A L WG +VL GD L+ A V + ++ Sbjct: 112 VRRGRPNLIAELAEAAHTDGVGSSPAHEWGTAAAVLAGDVLIHAALHAVATADVPAEPRR 171 Query: 131 EALSLVACTLAE---GELRQLSLSKNLDVTE-EDYLHVIKSKTAVLF-SAALEVSSLIAG 185 E L LV L GE+ ++ + ++V D L + KTA A L +++AG Sbjct: 172 ELLELVDRCLVRTVAGEVADVAYAARVEVPRLPDVLRMTSWKTAAYSCEAPLVAGAILAG 231 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 R AL G +G A+QL DDVL G+ GK+ D R GK T ++A+ R Sbjct: 232 AAPGARAALADVGRAVGAAYQLRDDVLGTFGDELVTGKSTSSDLRGGKVT--ALVAYARH 289 Query: 246 T 246 T Sbjct: 290 T 290 >gi|227875512|ref|ZP_03993652.1| geranylgeranyl pyrophosphate synthase [Mobiluncus mulieris ATCC 35243] gi|306818821|ref|ZP_07452543.1| possible dimethylallyltransferase [Mobiluncus mulieris ATCC 35239] gi|227843848|gb|EEJ54017.1| geranylgeranyl pyrophosphate synthase [Mobiluncus mulieris ATCC 35243] gi|304648507|gb|EFM45810.1| possible dimethylallyltransferase [Mobiluncus mulieris ATCC 35239] Length = 360 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 30/219 (13%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW-----------GNQTSVLVGDFLLS 115 L +E + ++HDD++D++ +RRG +A++ + G ++L GD L + Sbjct: 80 LGTCLELFQASAIVHDDIIDEARIRRGLPSAQIAFMTSSPAGGPKFGESAAILWGDLLFA 139 Query: 116 QA---FCMVIETKSQEALEALSLVACTL----AEGELRQL-----SLSKNLDVTEEDYLH 163 A F ++ L+AL + T+ A G+ L L+ ++ ++E + Sbjct: 140 AANSYFASAVKGLDSARLQALGQLYVTMQAEVAYGQYLDLFAESRDLTADVPPSKESAME 199 Query: 164 VIKSKTAVLFSAALEV--SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 VI+ KTA +S + + + +AG + L+ + LGIA+QL DD L G Sbjct: 200 VIRHKTA-RYSVVIPILIGAALAGATPDLLAKLEDFSTPLGIAYQLRDDDLGIFGSQELT 258 Query: 222 GKNIGEDFRNGKPTLPVILAFQ----RGTKREKNFWKST 256 GK G+D GK T+ + +A++ G + + +W + Sbjct: 259 GKPSGDDICAGKRTVQLAVAWEMTDDEGREYLQRYWGAP 297 >gi|116670118|ref|YP_831051.1| polyprenyl synthetase [Arthrobacter sp. FB24] gi|116610227|gb|ABK02951.1| Polyprenyl synthetase [Arthrobacter sp. FB24] Length = 364 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 77/319 (24%), Positives = 137/319 (42%), Gaps = 58/319 (18%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-------VLLACAI 71 ++ I D++ + + L+ +GGKRLR ++ +RG V A+ Sbjct: 32 VMSAISQDIDPLMGSISNLV-TGGKRLRALMC-----YWGWRGAGGEAAATEVVTAGSAL 85 Query: 72 EFIHTATLLHDDVVDDSALRRG--KVAARLV--------------WGNQTSVLVGDFLLS 115 E A L+HDD++D S RRG V R +G+ ++L GD LS Sbjct: 86 ELFQAAALIHDDIIDRSDTRRGGPSVHRRFSQLHEDQGWALDSERFGHAAAILTGDLCLS 145 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGEL------RQLSLSKNLDVTEE------DYLH 163 S+E + A + ++ L ++ + LD+ EE D Sbjct: 146 ---------FSEETFTDIGEAAASGSQARLIFNLMRAEVMAGQYLDILEEVAGPMRDRAG 196 Query: 164 VI-KSKTAVLFSAA-------LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 + ++++ + F +A L + +AG + + + ++ + LG AFQL DDVL Sbjct: 197 AVSRAQSIIRFKSAKYSTEHPLALGGALAGASDELLRGYSAFALPLGEAFQLRDDVLGVF 256 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 G+ GK G+D R GK T+ V A + + E F + + +S +++++ I+ Sbjct: 257 GDPVTTGKPAGDDLREGKRTVLVAFALDQASPEESRFLDAKLGSPDLSDDDVEEIRRIIV 316 Query: 276 ENRALVDTEYRAYSYGQKA 294 + AL TE +G+ A Sbjct: 317 DCGALQATEVLIEEFGRAA 335 >gi|903319|gb|AAC13867.1| geranylgeranyl pyrophosphate synthetase [Neurospora crassa] gi|28949983|emb|CAD70868.1| farnesyltranstransferase (al-3) [Neurospora crassa] Length = 428 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 9/207 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL GK +R + A L+ ++ ++ I +HTA+LL DDV D+S LRRG Sbjct: 135 YLNGHPGKDIRSQMVKAFDAWLDVPSESLEVITKVISMLHTASLLVDDVEDNSVLRRGFP 194 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A + + K+ +A+ S L G+ L L Sbjct: 195 VAHSIFGIPQTINTSNYVYFYALQELQKLKNPKAVSIFSEELLNLHRGQGMDLFWRDTLT 254 Query: 156 -VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN--LGIAFQLVDDVL 212 TE+DYL ++ +KT LF +++ +Q R + + +G+ FQ+ DD Sbjct: 255 CPTEDDYLEMVSNKTGGLFRLGIKL------MQAESRSPVDCVPLVNIIGLIFQIADDYH 308 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + K + ED GK + PVI Sbjct: 309 NLWNREYTANKGMCEDLTEGKFSFPVI 335 >gi|68304991|gb|AAY90002.1| predicted dimethylallyltransferase FN1327 [uncultured bacterium BAC13K9BAC] Length = 274 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 15/197 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSAL 90 V+ Y + +GGKRLRP++ A L + + AIE +H+ +L+H +DD Sbjct: 34 VMCYSMKNGGKRLRPIIIKEVAKSLSLNKNQFLKSMIAIELVHSYSLIHDDLPCMDDDDY 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT--LAEGELRQL 148 RRG+++ + ++L G+ LL+ AF ++ + + +E LSL++ LA G+ Sbjct: 94 RRGRLSTHKKYDEAQAILAGNSLLTMAFNLLAQDSNPSLVELLSLLSGHEGLAGGQ---- 149 Query: 149 SLSKNLDVTEEDY-LHVIK----SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 S ++D TE+ +IK KTA LF L +I+ + YG +G Sbjct: 150 --SLDVDTTEKKLNFKIIKKIHEQKTAKLFEFCLAAPFIISNKSQKEINMSRKYGKIIGT 207 Query: 204 AFQLVDDVLDYRGEVNE 220 FQ++DDV DY + NE Sbjct: 208 VFQIIDDVHDYENKDNE 224 >gi|302348187|ref|YP_003815825.1| Geranylgeranyl pyrophosphate synthetase, putative [Acidilobus saccharovorans 345-15] gi|302328599|gb|ADL18794.1| Geranylgeranyl pyrophosphate synthetase, putative [Acidilobus saccharovorans 345-15] Length = 310 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%) Query: 20 LKRICSDVEM--IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L I S +EM + + Y++ GGK R +T+ A D A A+E + A Sbjct: 28 LNSIVSRLEMAGLEGLASYIV-KGGKMFRGFMTMLFAEAAGGNLDRAKDAAIAVELVQGA 86 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +L DD++D A RRG +A +++G S + L+ A +V E AL + S+ A Sbjct: 87 SLALDDIIDKDAERRGGPSAWVLYGIGKSAMASLLLVPTALKLV-EQYGPLAL-SYSITA 144 Query: 138 C-TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 ++ GE+ S NL+ E YL + KT LFS A + + A + +A + Sbjct: 145 WESMVRGEIMDAYSSLNLEPVE--YLQLASLKTGSLFSLASTLGVIAANHEEYAERAW-N 201 Query: 197 YGMNLGIAFQLVDDVLDY 214 YG +G A+QL DD+ D+ Sbjct: 202 YGNIVGTAYQLADDITDF 219 >gi|320591510|gb|EFX03949.1| geranylgeranyl pyrophosphate synthetase [Grosmannia clavigera kw1407] Length = 328 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +YL GK R + A LE D+ ++ + +HTA+LL DDV D S+LRRG Sbjct: 46 EYLNGVRGKEFRTQIINAFDGWLEVPVDSLAVITRVVGMLHTASLLVDDVEDSSSLRRGL 105 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-QEALEALSLVACTLAEGELRQLSLSKN 153 A ++G ++ +++ A V + +S Q AL S +L G+ L Sbjct: 106 PVAHNIFGVPQAINSANYMYFVALQEVQKLRSHQRALAIFSEELVSLHRGQGMDLFWRDT 165 Query: 154 LDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 L TE+DYL ++ +KT LF ++ L+ S+ + + LG+ FQ+ DD Sbjct: 166 LTCPTEDDYLEMVANKTGGLFRLGIK---LMQAESRSLVDCVPLVNI-LGLIFQIQDDYR 221 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + K + ED GK + PVI Sbjct: 222 NLVASEYTLNKGLCEDLSEGKFSFPVI 248 >gi|164426247|ref|XP_960695.2| geranylgeranyl pyrophosphate synthetase [Neurospora crassa OR74A] gi|166214942|sp|P24322|GGPPS_NEUCR RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Albino-3 protein; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|157071260|gb|EAA31459.2| geranylgeranyl pyrophosphate synthetase [Neurospora crassa OR74A] Length = 433 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 9/207 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL GK +R + A L+ ++ ++ I +HTA+LL DDV D+S LRRG Sbjct: 140 YLNGHPGKDIRSQMVKAFDAWLDVPSESLEVITKVISMLHTASLLVDDVEDNSVLRRGFP 199 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A + + K+ +A+ S L G+ L L Sbjct: 200 VAHSIFGIPQTINTSNYVYFYALQELQKLKNPKAVSIFSEELLNLHRGQGMDLFWRDTLT 259 Query: 156 -VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN--LGIAFQLVDDVL 212 TE+DYL ++ +KT LF +++ +Q R + + +G+ FQ+ DD Sbjct: 260 CPTEDDYLEMVSNKTGGLFRLGIKL------MQAESRSPVDCVPLVNIIGLIFQIADDYH 313 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + K + ED GK + PVI Sbjct: 314 NLWNREYTANKGMCEDLTEGKFSFPVI 340 >gi|156538763|ref|XP_001607890.1| PREDICTED: similar to ENSANGP00000021639 [Nasonia vitripennis] Length = 533 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 11/177 (6%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM---VIETKSQEAL 130 +H +++DD++D++ LRRG A V+G+ +++V + L AF M VI K+ EAL Sbjct: 134 MHDYVMIYDDLLDNTELRRGIPAVHRVYGSNRTIIVCEGL---AFIMLQKVIAMKNAEAL 190 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + S +GE + N V T ++Y+H+++ K L+ +++ + + Sbjct: 191 QVYSEGMIRYHKGEAFENYYRFNFKVPTVDEYMHIVEIKLTALYYTVVQLMQAFSSNKTD 250 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 R +++G L + +D + + K +D GK +LP+I A Q GT Sbjct: 251 FRPFTQAFGYYL----KFHNDYCNLQERSYWETKGFADDITEGKFSLPIIHAIQSGT 303 >gi|63103163|gb|AAY33487.1| farnesyl diphosphate synthase [Mythimna unipuncta] Length = 427 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 41/256 (16%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYR----GDN-HV--LLACAIEFIHT 76 +P+ K+L GK+ R + T+ MLE + +N H+ ++ ++E HT Sbjct: 112 VPEAGKWLAKLLQYNVPNGKKNRGLATVMAYKMLEKKENLTPENIHLANMMGWSVEMFHT 171 Query: 77 ATLLHDDVVDDSALRRGKVA--------------ARLVWGNQTSVLVGDFLLSQAFCMVI 122 LL +D+++ + +RRG A L+ S L F + V+ Sbjct: 172 HQLLLNDIMEGTEMRRGAPCWYKHPEVGLTAINDAALIQAAMFSTLKRHFNNRNCYKTVL 231 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE---EDYLHVIKSKTAV-LFSAALE 178 ET ++ L+ C++ Q++ + D+T+ E Y + K KT+ F + Sbjct: 232 ETFNE------MLLKCSVGHFLENQMAKTDKPDLTQFTMEKYEAITKYKTSYHTFQMPVT 285 Query: 179 VSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++ L+ GV++ + RQA K+ + +G FQ+ DD LD G+ GKN G D ++GK T Sbjct: 286 LALLMTGVEDPETHRQA-KTILLKMGEFFQIQDDFLDCFGDPAVTGKN-GTDIQDGKCTW 343 Query: 237 PVILAFQRGTKREKNF 252 ++A QR + ++K F Sbjct: 344 LAVVALQRASPKQKQF 359 >gi|45190369|ref|NP_984623.1| AEL238Cp [Ashbya gossypii ATCC 10895] gi|74693865|sp|Q758K0|GGPPS_ASHGO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|44983265|gb|AAS52447.1| AEL238Cp [Ashbya gossypii ATCC 10895] Length = 320 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 10/182 (5%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E +H A+LL DD+ D+SA RRG AA +V+G+ ++ +++ + ++ + +Q Sbjct: 63 VEMLHVASLLIDDIEDNSAWRRGVAAAHVVYGSPMTINTANYMYFVSMSLLGQLAAQRPA 122 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSS 181 L + E E+ L + LD+ +E DYL ++ KT LF + + Sbjct: 123 GPLQDLLKVFNE-EMMNLHRGQGLDIYWRDTFTVPSEHDYLRMVMHKTGGLFRLTVRIME 181 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + L LG+ +Q+ DD L+ K +D GK + P+I Sbjct: 182 ALREGPDGPGSTLVPLSNLLGVLYQVRDDYLNLTDSRMSENKGFADDITEGKFSYPIIHG 241 Query: 242 FQ 243 Q Sbjct: 242 LQ 243 >gi|294633680|ref|ZP_06712238.1| polyprenyl synthetase [Streptomyces sp. e14] gi|292830322|gb|EFF88673.1| polyprenyl synthetase [Streptomyces sp. e14] Length = 304 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 32/262 (12%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDVVDDS 88 ++V+ + GGKRLR L A ++ D L A +IE + T L+HDD+VDDS Sbjct: 47 ELVRDMSLRGGKRLRVALLYEAARLVT--SDAVAGLEEAALSIELLQTHGLIHDDIVDDS 104 Query: 89 ALRRGKVAA------RLVWGNQTS----VLVGDFLLSQAF----CMVIETKSQEALEALS 134 +RRG + R QT+ VL GD AF ++ ++ +A++ Sbjct: 105 PVRRGAASVYYAYRERFADRPQTALGLAVLAGDL---AAFLSVRVLLTAPVPRDLRQAMA 161 Query: 135 LVACTLAE----GELRQLSLSKNL-DVTEEDYLHVIKSKTAVLFS--AALEVSSLIAGVQ 187 V T G++ L L ++ + + L ++ + +S A L++ L AG Sbjct: 162 AVQATAGADTVVGQI--LDLERDFGPLPDRATLDLVSEYKSARYSVLAPLQLGLLAAGAD 219 Query: 188 NSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + L Y +GI+ Q+ DD LD + + +G+ G D R G+ + V T Sbjct: 220 PAAHEKELARYATLVGISGQMCDDYLDLFADADAVGRPAGSDLRAGRRSYAVCAVLAATT 279 Query: 247 KREKNFWKSTINDGKISVENLK 268 RE+ +S + D E ++ Sbjct: 280 GRERELVESALADPGCRAETVR 301 >gi|158286675|ref|XP_308860.3| AGAP006894-PA [Anopheles gambiae str. PEST] gi|157020582|gb|EAA03964.3| AGAP006894-PA [Anopheles gambiae str. PEST] Length = 324 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 5/203 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK++R L LA L D ++ ++ +H ++LL DD+ D+S LRRG A ++ Sbjct: 38 GKQVRSKLALAINHWLHIPNDKLAAISEIVQMLHNSSLLIDDIEDNSILRRGIPVAHKIY 97 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-TEED 160 G +++ +++L A V + +A + L G+ ++ N TE + Sbjct: 98 GVASTINAANYVLFLALEKVQQLGHPDATRVYTEQLLELHRGQGMEIYWRDNYACPTETE 157 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 Y + KT LF A+ + L + R+ LG+ FQ+ DD + + Sbjct: 158 YKQMTIRKTGGLFMLAIRLMQLFS----ENRKDFTKLTAILGLYFQIRDDYCNLSMKEYS 213 Query: 221 MGKNIGEDFRNGKPTLPVILAFQ 243 K+ ED GK + PVI A Q Sbjct: 214 ENKSYCEDLTEGKFSFPVIHAIQ 236 >gi|316976387|gb|EFV59689.1| putative squamous cell carcinoma antigen recognized by T-cells 3 [Trichinella spiralis] Length = 1241 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 17/250 (6%) Query: 10 KDMEKVNFLIL---KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 K M+K N ++L + E + KY+ GK++R L L + DN ++ Sbjct: 915 KRMDKDNSMLLSLSPPASKEEEELIAPFKYICSIPGKQIRVKLGFNLWLNV----DNEIV 970 Query: 67 LACA--IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 A + +E +H A+L+ DD+ D S LRRG ++G T++ +++ A ++ Sbjct: 971 NAISEIVEMLHNASLMIDDIEDSSELRRGMPVTHRIYGLPTTLNTANYIYFVALSKTVQL 1030 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + ++A++ + L G+ ++ + TE YL ++ KT LF + + L Sbjct: 1031 RHRDAVKVFTESLLDLHRGQGMEIYWRDAVICPTEAKYLDMVIKKTGGLFRLGVNMLQLF 1090 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLD-YRGEVNEMG--KNIGEDFRNGKPTLPVIL 240 + + Q L ++ FQ+ DD ++ GEV E K ED GK + P+I Sbjct: 1091 STNKTDYNQLLN----DMATYFQIRDDYMNLVAGEVRENFSLKGFAEDLTEGKFSFPIIH 1146 Query: 241 AFQRGTKREK 250 A Q + ++ Sbjct: 1147 ALQSNPENDQ 1156 >gi|29841005|gb|AAP06018.1| similar to NM_010282 geranylgeranyl diphosphate synthase 1; GGPP synthase in Mus musculus [Schistosoma japonicum] Length = 335 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 7/231 (3%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 MEK N ++ V M P Y + GK +R +L A L+ +++ I Sbjct: 1 MEKRNMDGFGKLSEKVVMEP--YNYTCSTNGKGIRSLLMAAFNYWLKVPESTLDVISSVI 58 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 + +H A+L+ DD+ D S LRRGK AA V+G +S+ +++ A + + E+++ Sbjct: 59 QMLHNASLIIDDIEDGSYLRRGKPAAHCVFGTASSINSANYVYFLALEKLSVLRRPESVK 118 Query: 132 ALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L G+ + + +E +Y ++ KT LF + + L + Q Sbjct: 119 IFTEQMLELHRGQGMDIYWRSSFKCPSESEYEAMVLCKTGGLFGLGVRLMQLFSKNQTDY 178 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + L + +G+ FQ+ DD + K ED GK + P++ A Sbjct: 179 KPLLDT----IGLFFQIRDDYANLVDLSYHKKKMFAEDLTEGKFSYPIVRA 225 >gi|260205469|ref|ZP_05772960.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis K85] gi|289574857|ref|ZP_06455084.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis K85] gi|289539288|gb|EFD43866.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis K85] Length = 352 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 31/236 (13%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNH--VLLACAIEFIHTATLLHDDVVDDSALRRGK 94 + GGKRLRP+ + R + +LL A+E +H L+HDD++D SA RRG+ Sbjct: 37 FVLGGGKRLRPLFAYWGWHAVASREPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGR 96 Query: 95 VAARLVW----------------GNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVA 137 A+L + G ++L+GD L+Q + I +K Q AL + Sbjct: 97 PTAQLRYAALHRDRDWRGSPDQFGMSAAILLGD--LAQVWADDIVSKVCQSALAPDAQRR 154 Query: 138 CTLAEGELRQLSLS-KNLDVTEE--------DYLHVIKSKTAVL-FSAALEVSSLIAGVQ 187 ++R L + LD+ E ++V KTA S L++ + A + Sbjct: 155 VHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADR 214 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + V + +G +LG+AFQL DDVL G+ GK G+D ++GK T+ V A + Sbjct: 215 SDVAAIFEHFGADLGVAFQLRDDVLGVFGDPTVTGKPSGDDLKSGKRTVLVAEAVE 270 >gi|213510982|ref|NP_001135248.1| Geranylgeranyl pyrophosphate synthetase [Salmo salar] gi|209155246|gb|ACI33855.1| Geranylgeranyl pyrophosphate synthetase [Salmo salar] Length = 309 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L D ++ E +H A+LL DD+ D S LRRG Sbjct: 19 KYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDDIEDSSTLRRGF 78 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ EA+ + L G+ + Sbjct: 79 PVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPEAVHVFTRQLLELHRGQGLDIHWRDTY 138 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TE Y ++ KT LF A+ + L +G + ++ L + LG+ FQ+ DD + Sbjct: 139 TCPTESQYRTMVLQKTGGLFGLAVGLMQLFSGWKRDLKPLLDT----LGLFFQIRDDYAN 194 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 K+ ED GK + P I A Sbjct: 195 LNSAEYSENKSFCEDLTEGKFSFPTIHA 222 >gi|114776787|ref|ZP_01451830.1| geranyltranstransferase [Mariprofundus ferrooxydans PV-1] gi|114552873|gb|EAU55304.1| geranyltranstransferase [Mariprofundus ferrooxydans PV-1] Length = 295 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 18/229 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA-CAIEFIHTATLLHDDVVD 86 E + ++Y + +GGKR+RP L L + L + + A AIE IHT +L+HDD+ Sbjct: 31 ERLLSAMRYSLMAGGKRVRPALLLESYLACGGKDHAAAMPAMLAIECIHTYSLIHDDLPC 90 Query: 87 DSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-----SQEALEALSLVA-C 138 LRRGK + T+VL D L + AF ++ E + E + L+L A C Sbjct: 91 MDDDDLRRGKPTCHRRFDEATAVLAADALQALAFELLAEAELDPELRLELIRKLALAAGC 150 Query: 139 T-LAEGELRQLSLSKNLDV----TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G++ + + D+ E +LH KT L E +++AG + +A Sbjct: 151 QGMVGGQMMDMQAEHDSDIDMLMVERIHLH----KTGALLCWCCEAGAMLAGAGTAELEA 206 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 YG +G+ FQ+ DD+LD +GK+ G+D K T +L Sbjct: 207 SSRYGKAVGLLFQVADDILDATASSAALGKSAGKDAAQNKATYVSVLGL 255 >gi|62959209|gb|AAY23712.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP840] Length = 145 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 12/134 (8%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-IETKSQEA------LEALSLVACT--L 140 LRRG+ V+ ++L GD LL++AF MV + + + A + LSLVA L Sbjct: 12 LRRGRPTNHKVYDEAVAILAGDALLTRAFEMVALRSPAVPADRLLKVVGELSLVAGAPGL 71 Query: 141 AEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G++ L K +D+ +Y+H+ KT L SA + ++I G +++ +AL++Y Sbjct: 72 VGGQVVDLECEGKEVDLETLEYIHL--HKTGALLSACVITGAMIGGADDALIKALRTYAR 129 Query: 200 NLGIAFQLVDDVLD 213 +G+AFQ++DD+LD Sbjct: 130 GIGLAFQIIDDILD 143 >gi|6806915|ref|NP_034412.1| geranylgeranyl pyrophosphate synthase [Mus musculus] gi|6831551|sp|Q9WTN0|GGPPS_MOUSE RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|4586868|dbj|BAA76512.1| GGPP synthase [Mus musculus] gi|47124116|gb|AAH69913.1| Geranylgeranyl diphosphate synthase 1 [Mus musculus] gi|74215597|dbj|BAE21415.1| unnamed protein product [Mus musculus] Length = 300 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +YL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S LRRG Sbjct: 17 RYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + Sbjct: 77 PVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDTY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|289759542|ref|ZP_06518920.1| predicted protein [Mycobacterium tuberculosis T85] gi|289715106|gb|EFD79118.1| predicted protein [Mycobacterium tuberculosis T85] Length = 230 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 4/125 (3%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETK 125 A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A ++ E Sbjct: 101 AVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLTDECV 160 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + A+ L + L G+ L +VT +DYL + KTA L + +L+A Sbjct: 161 AVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVAN 220 Query: 186 VQNSV 190 ++ Sbjct: 221 ADDAT 225 >gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera] Length = 341 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 26/202 (12%) Query: 28 EMIPDVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV 84 + I + ++Y + + GGKR P++ +A + + GD ACA+E +H A+L+HDD+ Sbjct: 75 QQIYEAMRYSVLAKGGKRAPPVMCVAVCEL--FGGDRLAAFPTACALEMVHAASLIHDDL 132 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALE---------- 131 +DD RRG+ + V+G ++L GD L F ++ T S E Sbjct: 133 PCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEI 192 Query: 132 ALSLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 A S+ + +A G+ L + N +D + + +AV + G + Sbjct: 193 ARSVGSTGMAAGQFLDLEGAPNSVDFVQRKKFGEMAECSAV-------CGGFLGGAADDD 245 Query: 191 RQALKSYGMNLGIAFQLVDDVL 212 L+ YG +G+ +Q+VDD+L Sbjct: 246 ILRLRRYGRAVGMLYQVVDDML 267 >gi|226372050|gb|ACO51650.1| Geranylgeranyl pyrophosphate synthetase [Rana catesbeiana] Length = 299 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 21/216 (9%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQIRTKLSQAFNHWLNVPEDKTQVIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A+ + +L +L + L Sbjct: 77 PVAHSIYGVPSVINSANYVYFLGLEKVLTLNHPDAVNVFT--------QQLLELHRGQGL 128 Query: 155 DV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 D+ TE +Y ++ KT LF A+ + L + S ++ LK LG+ F Sbjct: 129 DIYWRDTYTCPTETEYKSMVLQKTGGLFGLAVGLMQLFS----SSKKDLKPLLNTLGLFF 184 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 Q+ DD + + K+ ED GK + P I A Sbjct: 185 QIRDDYANLNSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|330917321|ref|XP_003297764.1| hypothetical protein PTT_08283 [Pyrenophora teres f. teres 0-1] gi|311329353|gb|EFQ94125.1| hypothetical protein PTT_08283 [Pyrenophora teres f. teres 0-1] Length = 394 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 7/230 (3%) Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 E ++F R C + E I + +Y+ GK R + A L+ ++ ++A + Sbjct: 87 ESLDFTEGIRWCPEKEKAIKNPFEYIASQPGKEFRTRVLEAFNEWLQISDESLKVIANVV 146 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EAL 130 +HTA+LL DD+ D S LRRG+ A V+G ++ ++ A + + +Q EAL Sbjct: 147 RTLHTASLLIDDIQDSSVLRRGRPVAHRVYGVAQTINSANYHYFLALQELRKLDNQTEAL 206 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L +G+ +L TE+DYL ++ +KT LF A+ + ++S Sbjct: 207 MIYETEMLRLHQGQGMELYWRDTSTCPTEDDYLEMVSNKTRGLFRLAIR----LMQSRSS 262 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 R LG+ FQ+VDD + K ED GK + PVI Sbjct: 263 SRMDCIPLVQLLGLIFQIVDDYKNLSDVDYTQAKGACEDITEGKFSFPVI 312 >gi|154249013|ref|YP_001409838.1| polyprenyl synthetase [Fervidobacterium nodosum Rt17-B1] gi|154152949|gb|ABS60181.1| Polyprenyl synthetase [Fervidobacterium nodosum Rt17-B1] Length = 341 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/299 (24%), Positives = 135/299 (45%), Gaps = 52/299 (17%) Query: 20 LKRICSDVEMI-PDVVKYLI-------FSGGKRLRPMLTLATALMLEYRG------DNHV 65 ++ +C +++ I P+ +K LI GKR+RP+L L+L Y G D+ + Sbjct: 14 IETLCEELKKIAPENLKELIENFNEFTLRPGKRVRPLL-----LLLSYNGYKGKNMDDAI 68 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---------GNQTSVLVGDFLLSQ 116 A AIE +H+ L+HDD++D++ LRRGK + G +++VGD + Sbjct: 69 TFAAAIEIMHSFLLVHDDIIDNADLRRGKPTLHKTYEKSYNSSKLGTDLAIVVGDIVAFY 128 Query: 117 AFCMVIETKSQEA-----LEALSLVACTLAEGELRQLSLSKNLD--VTEEDYLHVIKSKT 169 F ++ E K E+ ++ S G+L + + +D + ED I K Sbjct: 129 IFGILSELKVSESTLKKIVKNFSKCYVNTGFGQLLDILYAGRIDDKIVNED----IPEKI 184 Query: 170 AVLFSAALE-VSSLIAGVQNSVRQALKSY------GMNLGIAFQLVDDVLD-YRGEVNEM 221 + L +A V ++ G S K G N GIAFQ DD++ + G+ + Sbjct: 185 SELKTAYYTFVYPMLFGYYLSENNIEKEEEKILIVGKNAGIAFQYRDDIIGIFGGDAKTL 244 Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280 D GK T + L ++ + +K + + I+ + +++K + ++R+ ++ Sbjct: 245 N-----DLHEGKFTSVIKLTYELLDENDKKIFLNLISKNPKNESDIEKLYELIRKTNSV 298 >gi|70606778|ref|YP_255648.1| polyprenyl synthetase [Sulfolobus acidocaldarius DSM 639] gi|68567426|gb|AAY80355.1| polyprenyl synthetase [Sulfolobus acidocaldarius DSM 639] Length = 283 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D++M+ +V KY I GKR R +L + L N + A AIE +H+++L DD+V Sbjct: 27 DLDML-EVSKY-ILKDGKRYRAVLNMFFTEALGGELSNSLDAALAIEILHSSSLALDDIV 84 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D RRGK++A ++ N+ V + ++L+ A +I + AL+ + A G + Sbjct: 85 DYDTTRRGKLSAWALYTNRRVVFITNYLIPSALN-IISRYGENALKVSLELWKDTAVGAI 143 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 K++ YL I+ KT+ LF + +++ A + + L G LGI + Sbjct: 144 ------KDMFGPATSYLSTIELKTSSLFKLSTALAAFTADREKDL-DLLLDMGKYLGIMY 196 Query: 206 QLVDDVLD 213 QL+DD +D Sbjct: 197 QLIDDYID 204 >gi|90422801|ref|YP_531171.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18] gi|90104815|gb|ABD86852.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18] Length = 288 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 21/215 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDV--VDDS 88 + ++Y +F G R+RP L + A E A+E +H A+L+HDD+ D + Sbjct: 29 EAMRYAVFPRGARVRPRLCHSVAAACGEDNPAATEAAGAALELMHCASLVHDDLPCFDGA 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSL-------VACTL 140 A RRG+ + +G +VL GD L+ AF + T + E L AL++ V + Sbjct: 89 ATRRGRPSVHKAFGEPLAVLTGDALIVLAFQTIARVTCAPERLAALTMTIGQAVGVPFGI 148 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ + NL H +SKT LF AA + AG + + G Sbjct: 149 VAGQAWECESEINL-------AHYHRSKTGALFVAATAAGAASAGADP---EPWRLVGEK 198 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +G A+Q+ DD+ D + +E+GK +G+D NG+P+ Sbjct: 199 IGEAYQVADDLRDAAADEDEIGKPVGQDVANGRPS 233 >gi|269977242|ref|ZP_06184215.1| dimethylallyltransferase [Mobiluncus mulieris 28-1] gi|307700943|ref|ZP_07637968.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16] gi|269934545|gb|EEZ91106.1| dimethylallyltransferase [Mobiluncus mulieris 28-1] gi|307613938|gb|EFN93182.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16] Length = 360 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 30/219 (13%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW-----------GNQTSVLVGDFLLS 115 L +E + ++HDD++D++ +RRG +A++ + G ++L GD L + Sbjct: 80 LGTCLELFQASAIVHDDIIDEARIRRGLPSAQIAFMTSSPAGGPKFGESAAILWGDLLFA 139 Query: 116 QA---FCMVIETKSQEALEALSLVACTL----AEGELRQL-----SLSKNLDVTEEDYLH 163 A F ++ L+AL + T+ A G+ L L+ ++ ++E + Sbjct: 140 AANSYFASAVKGLDSARLQALGQLYVTMQAEVAYGQYLDLFAESRDLTADVPPSKESAME 199 Query: 164 VIKSKTAVLFSAALEV--SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 VI+ KTA +S + + + +AG + L+ + LGIA+QL DD L G Sbjct: 200 VIRHKTA-RYSVVIPILIGAALAGATPDLLVKLEDFSTPLGIAYQLRDDDLGIFGSQELT 258 Query: 222 GKNIGEDFRNGKPTLPVILAFQ----RGTKREKNFWKST 256 GK G+D GK T+ + +A++ G + + +W + Sbjct: 259 GKPSGDDICAGKRTVQLAVAWEMTDDEGREYLQRYWGAP 297 >gi|41053321|ref|NP_956329.1| geranylgeranyl pyrophosphate synthase [Danio rerio] gi|30353819|gb|AAH52115.1| Geranylgeranyl diphosphate synthase 1 [Danio rerio] Length = 327 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 10/260 (3%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L D ++ E +H A+LL DD+ D S LRRG Sbjct: 18 KYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDDIEDSSKLRRGF 77 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ + EA+ + L G+ + Sbjct: 78 PVAHSIYGIPSVINSANYVYFLGLEKVLMLEHPEAVRVFTRQLLELHRGQGLDIHWRDTY 137 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 +E +Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 138 TCPSEAEYRAMVLQKTGGLFGLAVGLMQLFSDWKRDLKPLLDT----LGLYFQIRDDYAN 193 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAF--QRGTKREKNFWKSTINDGKIS---VENLK 268 + K+ ED GK + P I A G+ + +N + + I V+ L+ Sbjct: 194 LNSKEYSANKSFCEDLTEGKFSFPTIHAIWSHPGSTQVQNILRQRTENLDIKRYCVDYLE 253 Query: 269 KAFIIMRENRALVDTEYRAY 288 K + L+D E AY Sbjct: 254 KVGSFAYTRQTLLDLEVEAY 273 >gi|147677775|ref|YP_001211990.1| hypothetical protein PTH_1440 [Pelotomaculum thermopropionicum SI] gi|146273872|dbj|BAF59621.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 256 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 10/171 (5%) Query: 43 KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD-DSALRRGKVAARLVW 101 K +RP L + ++ + LLA +FIH A+ +H + + DS L R + R Sbjct: 44 KTVRPALVILSSRIYGLARQKTALLASVFQFIHMASKVHQGISENDSNLARVRKDPR--N 101 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE-- 159 +Q VLVGD+L + F ++ + L+ L+ + C + EG + L K LD + Sbjct: 102 ASQFPVLVGDYLYGKFFTLLCDAGMTGLLQPLAEIICQIHEGSI----LKKKLDGKSQNS 157 Query: 160 -DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 ++ ++ +TA LF+ + + +AG + + LK +G +LG+ + L++ Sbjct: 158 HEFYEAVRKETAELFAGCCTLGARMAGAPDKDQDLLKQFGRSLGMVYGLLE 208 >gi|117164674|emb|CAJ88220.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces ambofaciens ATCC 23877] Length = 380 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 95/229 (41%), Gaps = 26/229 (11%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDD 87 + D V L+ GGKRLR GD +L A+E + L+HDDV+D Sbjct: 54 VADRVAALVARGGKRLRTAFACCGWRAAGGSGDPAAVLRVGAALELLQACALVHDDVMDG 113 Query: 88 SALRRGKVA-----ARLVW-----------GNQTSVLVGDFLLSQAFCMVIET-----KS 126 S RRG A AR W G +VL GD L A ++ ET Sbjct: 114 SLQRRGAPALHVELARGHWAAGMHGSAETFGTSAAVLAGDLALVWADDLLTETALGTPHG 173 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA--LEVSSLIA 184 E + + G+ L ++ L V K+A L++ A L + + +A Sbjct: 174 PRLHEEWRAMRTEMVAGQYLDLHAQAARSSGVDEALTVATLKSA-LYTVARPLALGASLA 232 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 G +AL+ G G+AFQL DD+L G+ GK G+D R+ K Sbjct: 233 GADEGTVEALRMAGRCAGLAFQLRDDLLGAFGDPALTGKPAGDDLRSRK 281 >gi|215447707|ref|ZP_03434459.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T85] gi|294995846|ref|ZP_06801537.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 210] Length = 193 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 4/125 (3%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETK 125 A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A ++ E Sbjct: 64 AVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLTDECV 123 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + A+ L + L G+ L +VT +DYL + KTA L + +L+A Sbjct: 124 AVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVAN 183 Query: 186 VQNSV 190 ++ Sbjct: 184 ADDAT 188 >gi|119964435|ref|YP_947457.1| polyprenyl synthetase [Arthrobacter aurescens TC1] gi|119951294|gb|ABM10205.1| putative polyprenyl synthetase [Arthrobacter aurescens TC1] Length = 364 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 138/326 (42%), Gaps = 56/326 (17%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY--------RGDNHVLLA-C 69 ++ + DVE + + L+ +GGKRLR ALM + GD ++ A C Sbjct: 32 LMATVSPDVEPLIGSISNLV-TGGKRLR-------ALMCYWGWRGAGGPAGDPDIITAGC 83 Query: 70 AIEFIHTATLLHDDVVDDSALRRG--KVAARL-------VW-------GNQTSVLVGDFL 113 A+E A L+HDD++D S RRG V R W G+ ++L GD Sbjct: 84 ALELFQAAALIHDDIIDRSDTRRGGPSVHKRFNQLHEMNGWALDSGRFGDAAAILTGDLC 143 Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE-------DYLHVIK 166 LS + E + A + + + E+ + LD+ EE V + Sbjct: 144 LSFSEESFTEIGHRAAAGSPARRIFNVMRAEVMA---GQYLDILEEVAGPVRDRAGSVER 200 Query: 167 SKTAVLFSAA-------LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 +K+ + + +A L + +AG + + + + LG AFQ+ DDVL G+ Sbjct: 201 AKSIIRYKSAKYSTEHPLALGGALAGAPEGLLKGYSEFSLPLGEAFQMRDDVLGVFGDPE 260 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND---GKISVENLKKAFIIMRE 276 GK G+D R GK T+ V A + E ++ + + G++ V +++ + E Sbjct: 261 TTGKPAGDDLREGKRTVLVGFAINQAPPAEADYLDRMLGNPGLGEVEVAEIRRVIV---E 317 Query: 277 NRALVDTEYRAYSYGQKAKDSLRCLP 302 AL TE +A ++L LP Sbjct: 318 CGALDATESLIAELSNRAFEALERLP 343 >gi|46109712|ref|XP_381914.1| hypothetical protein FG01738.1 [Gibberella zeae PH-1] Length = 757 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/250 (26%), Positives = 105/250 (42%), Gaps = 13/250 (5%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K L D+ L+++ + DV M P +YL K +R A L+ Sbjct: 442 KTLSDIMLQELPPME--------DDVVMEP--YRYLCSLPSKGVRNKTIDALNFWLKVPI 491 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +N + E +H ++L+ DD+ D S LRRGK +A V+G ++ F Q+ ++ Sbjct: 492 ENANTIKAITESLHGSSLMLDDIEDHSQLRRGKPSAHAVFGEAQTINSATFQYIQSVSLI 551 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVS 180 + +S +AL L G+ +L + N+ E+YL ++ KT LF L Sbjct: 552 SQLRSPKALNIFVDEIRQLFIGQAYELQWTSNMICPPLEEYLRMVDGKTGGLFR--LLTR 609 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + A V G FQ+ DD + + K ED GK +LP+I+ Sbjct: 610 LMAAESTTEVDVDFSRLCQLFGRYFQIRDDYANLKLADYTEQKGFCEDLDEGKFSLPLII 669 Query: 241 AFQRGTKREK 250 AF K K Sbjct: 670 AFNENNKAPK 679 >gi|326781297|ref|ZP_08240562.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1] gi|326661630|gb|EGE46476.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1] Length = 425 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 84/294 (28%), Positives = 120/294 (40%), Gaps = 53/294 (18%) Query: 34 VKYLIFSGGKRLRPML---TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 V GGKR+RP L + + E + L A+E I + L+HDDV+D S L Sbjct: 76 VADFTLDGGKRVRPRLLWWGMRSCGAAET--TAALRLGVALELIQSCALIHDDVMDRSRL 133 Query: 91 RRGKVAARL----------------VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 RRGK A + +G +VL GD L+ A V ET AL A+ Sbjct: 134 RRGKPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDLALAWADDTVAET----ALSAVQ 189 Query: 135 ---------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS----- 180 + + G+ L + + E L +TA L SA+ V Sbjct: 190 RRRIGPLWRAMRTEMVAGQYLDLRGQVSGGSSVEQAL-----RTACLKSASYSVERPLAL 244 Query: 181 -SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + +AG + AL+S G GIAFQL DD+L G+ GK G+D R GK T + Sbjct: 245 GAALAGADEATTDALRSAGRCAGIAFQLRDDLLGVFGDPELTGKPSGDDIREGKSTY--L 302 Query: 240 LAFQR------GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287 LA R G +R G ++ E+L + ++ A E +A Sbjct: 303 LAVARRWAEAAGDERSLAVLGRVPGGGDLAEEDLAEVRGVLEATGARAHVERKA 356 >gi|157107955|ref|XP_001650014.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti] gi|108879453|gb|EAT43678.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti] Length = 321 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 5/201 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK+ R + LA L + + ++ +H ++LL DD+ D+S LRRG A ++ Sbjct: 41 GKQFRAKMALAFNHWLNIPEEKLAAIGEVVQMMHNSSLLIDDIEDNSILRRGIPVAHKIY 100 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-TEED 160 G +++ G+++L A V EA + ++ L G+ ++ N TE + Sbjct: 101 GIASTINAGNYVLVLALAKVHGLGHPEAQQVVTEQLLELHRGQGMEIYWRDNFICPTEAE 160 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 Y ++ KT LF A+ + L + ++ LG++FQ+ DD + + Sbjct: 161 YKQMVIRKTGGLFMLAIRLMQLFS----DDKKDFTKLTAILGLSFQIRDDYCNLTSKDYS 216 Query: 221 MGKNIGEDFRNGKPTLPVILA 241 K+ ED GK + PVI A Sbjct: 217 DNKSYCEDLTEGKFSFPVIHA 237 >gi|254551210|ref|ZP_05141657.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 352 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 31/236 (13%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNH--VLLACAIEFIHTATLLHDDVVDDSALRRGK 94 + GGKRLRP+ + R + +LL A+E +H L+HDD++D SA RRG+ Sbjct: 37 FVLGGGKRLRPLFAYWGWHTVASREPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGR 96 Query: 95 VAARLVW----------------GNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVA 137 A+L + G ++L+GD L+Q + I +K Q AL + Sbjct: 97 PTAQLRYAALHRDRDWRGSPDQFGMSAAILLGD--LAQVWADDIVSKVCQSALAPDAQRR 154 Query: 138 CTLAEGELRQLSLS-KNLDVTEE--------DYLHVIKSKTAVL-FSAALEVSSLIAGVQ 187 ++R L + LD+ E ++V KTA S L++ + A + Sbjct: 155 VHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADR 214 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + V + +G +LG+AFQL DDVL G+ GK G+D ++GK T+ V A + Sbjct: 215 SDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVE 270 >gi|223938575|ref|ZP_03630466.1| Polyprenyl synthetase [bacterium Ellin514] gi|223892694|gb|EEF59164.1| Polyprenyl synthetase [bacterium Ellin514] Length = 189 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 19/160 (11%) Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKS-------------QEALEALSLVACTLAEGELRQ 147 +G +VL GD LL+QAF + + S A +L L+A +A+ E Sbjct: 1 FGEGIAVLAGDALLTQAFEIAALSPSWPRYTHKDLVLEIARASGSLQLIAGQVADLEAE- 59 Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 K + + Y+H + KT+ L ++ + + A + +AL +G N+G+AFQ+ Sbjct: 60 ---GKRISTAQLKYIH--ERKTSALLCCSVRLGGMSANCTPAQLKALTDFGYNVGLAFQI 114 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +DD+LD ++GK G+D + K T P ++ ++ K Sbjct: 115 IDDILDVTQTSEQLGKTAGKDTKAQKATYPSLIGLEKSRK 154 >gi|12848440|dbj|BAB27955.1| unnamed protein product [Mus musculus] gi|13905030|gb|AAH06798.1| Ggps1 protein [Mus musculus] gi|148700811|gb|EDL32758.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Mus musculus] Length = 236 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 5/208 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +YL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S LRRG Sbjct: 17 RYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + Sbjct: 77 PVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDTY 136 Query: 155 DV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 TEE+Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD + Sbjct: 137 TCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT----LGLFFQIRDDYAN 192 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K+ ED GK + P I A Sbjct: 193 LHSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|218677523|ref|ZP_03525420.1| farnesyltranstransferase protein [Rhizobium etli CIAT 894] Length = 195 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 13/176 (7%) Query: 68 ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIET 124 A AIE +H A+L+HDD+ D++ALRRG+ ++G +VL GD L+ AF + ++ Sbjct: 25 AAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYLSLQA 84 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLD----VTEEDYLHVIKSKTAVLFSAALEVS 180 L A + A G L ++++ V + Y H KT LF AA Sbjct: 85 ALTPELGARMIEVVAEAVGPSHGLIAGQSMEAMTHVPIDRYHHY---KTGSLFVAAATCG 141 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +L +G + G LG A+Q+ DD+ D G +GK D + +P++ Sbjct: 142 ALASGADPA---PWSKVGELLGHAYQIADDIADTVGRAEVLGKLPAVDTQLNRPSI 194 >gi|257068597|ref|YP_003154852.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM 4810] gi|256559415|gb|ACU85262.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM 4810] Length = 377 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 124/295 (42%), Gaps = 37/295 (12%) Query: 20 LKRICSDVEMIPD-VVKYLIFSGGKRLRPMLTL---ATAL---MLEYRGDNHVLLACAIE 72 L I + + D +++YL GGK LRP +AL E D AIE Sbjct: 39 LAEISPETAQLADALLEYL--DGGKLLRPRFCFWGGVSALGREPTEAEIDALARYGTAIE 96 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLV----------------WGNQTSVLVGDFLLSQ 116 + A L+HDDV+D S +RRG+ A + +G ++++GD LS Sbjct: 97 LVQAAALMHDDVIDHSPVRRGRPALHVQAERRHRAEELAGSAEDYGVAVAIVLGDLALSW 156 Query: 117 AFCMVIETKSQEALEALS-----LVACTLAEGE----LRQLSLSKNLDVTEEDYLHVIKS 167 A + + A + + + G+ L Q + E+ L VI+ Sbjct: 157 AEQIASGVEGSPGAVAAAHREFDALRTEVMSGQFLDILHQAGGFSSAPDAEQAALSVIRW 216 Query: 168 KTAVLFSA--ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KT V ++ + + + + G ++ + L ++ + +G AFQL DD+L G+ +E GK I Sbjct: 217 KT-VPYTVLRPVRIGAALLGADHTALETLSAWAIEVGTAFQLRDDLLSVVGDQDETGKPI 275 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280 G D GK T+ + + + + I S + + +MR + A+ Sbjct: 276 GGDIVEGKRTVLLARTWAAADAEGRALLERVIGRADASEQEISAVHQLMRSSGAV 330 >gi|15609310|ref|NP_216689.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis H37Rv] gi|15841663|ref|NP_336700.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31793351|ref|NP_855844.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis AF2122/97] gi|121638053|ref|YP_978277.1| putative geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661989|ref|YP_001283512.1| putative geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium tuberculosis H37Ra] gi|148823380|ref|YP_001288134.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis F11] gi|167967239|ref|ZP_02549516.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis H37Ra] gi|215403561|ref|ZP_03415742.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis 02_1987] gi|215411897|ref|ZP_03420671.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis 94_M4241A] gi|215427549|ref|ZP_03425468.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T92] gi|215431104|ref|ZP_03429023.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis EAS054] gi|215446402|ref|ZP_03433154.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T85] gi|218753894|ref|ZP_03532690.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis GM 1503] gi|219558151|ref|ZP_03537227.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T17] gi|224990547|ref|YP_002645234.1| putative geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253798764|ref|YP_003031765.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN 1435] gi|254232327|ref|ZP_04925654.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis C] gi|254364972|ref|ZP_04981018.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis str. Haarlem] gi|260187169|ref|ZP_05764643.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis CPHL_A] gi|260201290|ref|ZP_05768781.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T46] gi|289443678|ref|ZP_06433422.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T46] gi|289447799|ref|ZP_06437543.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis CPHL_A] gi|289554042|ref|ZP_06443252.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN 605] gi|289570287|ref|ZP_06450514.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T17] gi|289745445|ref|ZP_06504823.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis 02_1987] gi|289750767|ref|ZP_06510145.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T92] gi|289754281|ref|ZP_06513659.1| polyprenyl synthetase [Mycobacterium tuberculosis EAS054] gi|289758293|ref|ZP_06517671.1| polyprenyl synthetase [Mycobacterium tuberculosis T85] gi|289762332|ref|ZP_06521710.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis GM 1503] gi|294993558|ref|ZP_06799249.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis 210] gi|297634761|ref|ZP_06952541.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN 4207] gi|297731752|ref|ZP_06960870.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN R506] gi|298525665|ref|ZP_07013074.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis 94_M4241A] gi|306776423|ref|ZP_07414760.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu001] gi|306780200|ref|ZP_07418537.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu002] gi|306784947|ref|ZP_07423269.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu003] gi|306789314|ref|ZP_07427636.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu004] gi|306793640|ref|ZP_07431942.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu005] gi|306798031|ref|ZP_07436333.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu006] gi|306803911|ref|ZP_07440579.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu008] gi|306808482|ref|ZP_07445150.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu007] gi|306968308|ref|ZP_07480969.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu009] gi|306972535|ref|ZP_07485196.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu010] gi|307080242|ref|ZP_07489412.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu011] gi|307084831|ref|ZP_07493944.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu012] gi|313659086|ref|ZP_07815966.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN V2475] gi|2911093|emb|CAA17477.1| PROBABLE GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA2 (GGPPSASE) (GGPP SYNTHETASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE) [Mycobacterium tuberculosis H37Rv] gi|13881916|gb|AAK46514.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31618943|emb|CAD97048.1| PROBABLE GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA2 (GGPPSASE) (GGPP SYNTHETASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE) [Mycobacterium bovis AF2122/97] gi|121493701|emb|CAL72176.1| Probable geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601386|gb|EAY60396.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis C] gi|134150486|gb|EBA42531.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis str. Haarlem] gi|148506141|gb|ABQ73950.1| putative geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium tuberculosis H37Ra] gi|148721907|gb|ABR06532.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis F11] gi|224773660|dbj|BAH26466.1| putative geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253320267|gb|ACT24870.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN 1435] gi|289416597|gb|EFD13837.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T46] gi|289420757|gb|EFD17958.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis CPHL_A] gi|289438674|gb|EFD21167.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN 605] gi|289544041|gb|EFD47689.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T17] gi|289685973|gb|EFD53461.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis 02_1987] gi|289691354|gb|EFD58783.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T92] gi|289694868|gb|EFD62297.1| polyprenyl synthetase [Mycobacterium tuberculosis EAS054] gi|289709838|gb|EFD73854.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis GM 1503] gi|289713857|gb|EFD77869.1| polyprenyl synthetase [Mycobacterium tuberculosis T85] gi|298495459|gb|EFI30753.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis 94_M4241A] gi|308215160|gb|EFO74559.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu001] gi|308326915|gb|EFP15766.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu002] gi|308330351|gb|EFP19202.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu003] gi|308334184|gb|EFP23035.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu004] gi|308337984|gb|EFP26835.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu005] gi|308341669|gb|EFP30520.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu006] gi|308345161|gb|EFP34012.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu007] gi|308349463|gb|EFP38314.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu008] gi|308354094|gb|EFP42945.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu009] gi|308358037|gb|EFP46888.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu010] gi|308361973|gb|EFP50824.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu011] gi|308365602|gb|EFP54453.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu012] gi|323719268|gb|EGB28412.1| geranylgeranyl pyrophosphate synthetase id [Mycobacterium tuberculosis CDC1551A] gi|326903788|gb|EGE50721.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis W-148] gi|328458527|gb|AEB03950.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN 4207] Length = 352 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 31/236 (13%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNH--VLLACAIEFIHTATLLHDDVVDDSALRRGK 94 + GGKRLRP+ + R + +LL A+E +H L+HDD++D SA RRG+ Sbjct: 37 FVLGGGKRLRPLFAYWGWHAVASREPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGR 96 Query: 95 VAARLVW----------------GNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVA 137 A+L + G ++L+GD L+Q + I +K Q AL + Sbjct: 97 PTAQLRYAALHRDRDWRGSPDQFGMSAAILLGD--LAQVWADDIVSKVCQSALAPDAQRR 154 Query: 138 CTLAEGELRQLSLS-KNLDVTEE--------DYLHVIKSKTAVL-FSAALEVSSLIAGVQ 187 ++R L + LD+ E ++V KTA S L++ + A + Sbjct: 155 VHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADR 214 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + V + +G +LG+AFQL DDVL G+ GK G+D ++GK T+ V A + Sbjct: 215 SDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVE 270 >gi|325676958|ref|ZP_08156630.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707] gi|325552258|gb|EGD21948.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707] Length = 389 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 109/241 (45%), Gaps = 31/241 (12%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD-------NHVLLACAIEFIHTATLLHDDVV 85 ++ + GGKR+RPM L GD + A A+E + L+HDD++ Sbjct: 70 ALESFVLRGGKRVRPMFVWTG--WLGAGGDATGPEAPAALRAASALELVQACALVHDDII 127 Query: 86 DDSALRRGKVAARLVWGNQTS----------------VLVGDFLLSQAFCMVIETK-SQE 128 D S RRG + + +Q S +L+GD L+ A M+ E S + Sbjct: 128 DASTTRRGFPTVHVEFADQHSAHHWSGGSAEFGRAVAILLGDLALAWADDMIREAGLSPD 187 Query: 129 ALEALSLVACTLAE----GELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLI 183 A +S V + G+ +S D T E L V + KTA L + + + Sbjct: 188 AQARISPVWSAMRTEVLGGQFLDISSEVRGDETVEAALRVDRYKTAAYTIERPLHLGAAL 247 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG +++ A +++G ++GIAFQL DD+L G+ GK G+D R GK T+ A Q Sbjct: 248 AGADDALVAAYRTFGTDIGIAFQLRDDLLGVFGDPEVTGKPSGDDLRAGKRTVLFAEALQ 307 Query: 244 R 244 R Sbjct: 308 R 308 >gi|326905223|gb|EGE52156.1| LOW QUALITY PROTEIN: polyprenyl synthetase idsB [Mycobacterium tuberculosis W-148] Length = 222 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 4/125 (3%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI----ETK 125 A+E +H TLLHDDV+D A RRG+ VWG ++L+GD L + A ++ E Sbjct: 97 AVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLTDECV 156 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + A+ L + L G+ L +VT +DYL + KTA L + +L+A Sbjct: 157 AVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVAN 216 Query: 186 VQNSV 190 ++ Sbjct: 217 ADDAT 221 >gi|315506436|ref|YP_004085323.1| polyprenyl synthetase [Micromonospora sp. L5] gi|315413055|gb|ADU11172.1| Polyprenyl synthetase [Micromonospora sp. L5] Length = 347 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 114/259 (44%), Gaps = 25/259 (9%) Query: 12 MEKVNFLILKRICSDV-----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 +E+ L L + DV + D+V GK LR L LAT + G + V Sbjct: 16 LERYRGLALGALLDDVPDGGPRYLYDLVAEYPRRWGKGLRAALCLATCRA--FGGGDAVG 73 Query: 67 L--ACAIEFIHTATLLHDDVVDDSALRRGK--------VAARLVWGNQTSVLVGDFLLSQ 116 L A +E H A L+HDD+ D+S RRG V L GN T++L L + Sbjct: 74 LNAAVTVELFHNAFLIHDDIQDESEQRRGGRTLHAEYGVGVALNVGNMTNLLALRRLAAN 133 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFS 174 + + E ++ +L EG+ ++ ++ D+ +DY + KT+ ++ Sbjct: 134 RAALGSGIAWRLFTETELMMRHSL-EGQAIEIGWIRDNVCDLDADDYYRMCLKKTS-WYT 191 Query: 175 AALEVSSLI---AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + I G +N+V L YG LG AFQ+ DD L+ G+ GK I D Sbjct: 192 CIYPCRTGILVATGRENAV-DVLDRYGWYLGAAFQIQDDALNLTGDYARYGKEIAGDLWE 250 Query: 232 GKPTLPVILAFQRGTKREK 250 GK TL +I +R T E+ Sbjct: 251 GKRTLILIDFMRRCTPEER 269 >gi|254797046|ref|YP_003081883.1| putative geranyltranstransferase [Neorickettsia risticii str. Illinois] gi|254590280|gb|ACT69642.1| putative geranyltranstransferase [Neorickettsia risticii str. Illinois] Length = 256 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 14/212 (6%) Query: 10 KDMEKVNFLILKRICSDVEMIPD------VVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 K ++K + LI + + ++ + P ++Y + + +R L L + + Sbjct: 5 KKLQKASRLIHETLKENLSLFPSEDKLFQAIRYSLLAESSHIRGFLVLELGTLFNIPYVD 64 Query: 64 HVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + +A AIE IH+ +L+HDD+ +D+S RR + A + + T++L GD LL A+ + Sbjct: 65 TIEVAAAIEMIHSFSLIHDDLPALDNSNERRNQPACHIAFQESTAILAGDALLVLAY-QI 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + ++ S + G++ + S L E + K K+ LF+ + Sbjct: 124 LSHYGAPLVQRTSKYVLEMITGQVHDVIGSSTLTADE-----INKMKSGSLFALSCSSVG 178 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 +A S L+++G +GI FQ VDD+ D Sbjct: 179 HLANSAQSELTVLEAFGYEIGIIFQAVDDIKD 210 >gi|162286815|emb|CAP47201.1| putative geranylgeranyl diphosphate synthase [Aspergillus flavus] Length = 340 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 5/213 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 ++I V YL+ GK +R L A L+ D ++A + +HTA+LL DD+ D Sbjct: 54 KIIRGPVDYLLKCPGKDIRRKLMQAFNEWLKIPEDRLNIIAEIVGLLHTASLLIDDIQDS 113 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G ++ ++ A + E +A E + L G+ Sbjct: 114 SKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIFTEELLRLHRGQGMD 173 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 L +L TEE+Y+ +I +KT LF A+++ L + V + + LGI FQ Sbjct: 174 LYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKLMQLESEVTSDFLGLVDL----LGIIFQ 229 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + DD + + ++ K ED GK + +I Sbjct: 230 IRDDYQNLQSDLYSKNKGFCEDLTEGKFSFLII 262 >gi|302867155|ref|YP_003835792.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] gi|302570014|gb|ADL46216.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] Length = 347 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 114/259 (44%), Gaps = 25/259 (9%) Query: 12 MEKVNFLILKRICSDV-----EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 +E+ L L + DV + D+V GK LR L LAT + G + V Sbjct: 16 LERYRGLALGALLDDVPDGGPRYLYDLVAEYPRRWGKGLRAALCLATCRA--FGGGDAVG 73 Query: 67 L--ACAIEFIHTATLLHDDVVDDSALRRGK--------VAARLVWGNQTSVLVGDFLLSQ 116 L A +E H A L+HDD+ D+S RRG V L GN T++L L + Sbjct: 74 LNAAVTVELFHNAFLIHDDIQDESEQRRGGRTLHAEYGVGVALNVGNMTNLLALRRLAAN 133 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN--LDVTEEDYLHVIKSKTAVLFS 174 + + E ++ +L EG+ ++ ++ D+ +DY + KT+ ++ Sbjct: 134 RAALGSGIAWRLFTETELMMRHSL-EGQAIEIGWIRDNVCDLDADDYYRMCLKKTS-WYT 191 Query: 175 AALEVSSLI---AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + I G +N+V L YG LG AFQ+ DD L+ G+ GK I D Sbjct: 192 CIYPCRTGILVATGRENAV-DVLDRYGWYLGAAFQIQDDALNLTGDYARYGKEIAGDLWE 250 Query: 232 GKPTLPVILAFQRGTKREK 250 GK TL +I +R T E+ Sbjct: 251 GKRTLILIDFMRRCTPEER 269 >gi|257079431|ref|ZP_05573792.1| polyprenyl synthetase [Enterococcus faecalis JH1] gi|256987461|gb|EEU74763.1| polyprenyl synthetase [Enterococcus faecalis JH1] Length = 201 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 5/166 (3%) Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 GEL Q+S + ++ YL + KTA LFS + + V++ K G ++G Sbjct: 25 GELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIG 84 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK- 261 IAFQ+ DD+LDY + + K ED G TLP++ A+Q + + ++ G+ Sbjct: 85 IAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQAAP----DVFGPYLDKGRA 140 Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 I++E + ++ + + + + A KA ++ LPD + K Sbjct: 141 ITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAK 186 >gi|312140160|ref|YP_004007496.1| polyprenyl synthase [Rhodococcus equi 103S] gi|311889499|emb|CBH48816.1| putative polyprenyl synthase [Rhodococcus equi 103S] Length = 373 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 109/241 (45%), Gaps = 31/241 (12%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGD-------NHVLLACAIEFIHTATLLHDDVV 85 ++ + GGKR+RPM L GD + A A+E + L+HDD++ Sbjct: 54 ALESFVLRGGKRVRPMFVWTG--WLGAGGDATGPEAPAALRAASALELVQACALVHDDII 111 Query: 86 DDSALRRGKVAARLVWGNQTS----------------VLVGDFLLSQAFCMVIETK-SQE 128 D S RRG + + +Q S +L+GD L+ A M+ E S + Sbjct: 112 DASTTRRGFPTVHVEFADQHSAHHWSGGSAEFGRAVAILLGDLALAWADDMIREAGLSPD 171 Query: 129 ALEALSLVACTLAE----GELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLI 183 A +S V + G+ +S D T E L V + KTA L + + + Sbjct: 172 AQARISPVWSAMRTEVLGGQFLDISSEVRGDETVEAALRVDRYKTAAYTIERPLHLGAAL 231 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG +++ A +++G ++GIAFQL DD+L G+ GK G+D R GK T+ A Q Sbjct: 232 AGADDALVAAYRTFGTDIGIAFQLRDDLLGVFGDPEITGKPSGDDLRAGKRTVLFAEALQ 291 Query: 244 R 244 R Sbjct: 292 R 292 >gi|311895558|dbj|BAJ27966.1| putative polyprenyl diphosphate synthase [Kitasatospora setae KM-6054] Length = 368 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 74/271 (27%), Positives = 114/271 (42%), Gaps = 42/271 (15%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 TL + +L I + + D ++ + GGKRLRP +R Sbjct: 24 TLGEFMAERTALLSGISDQLGPVSDALRDFLLDGGKRLRPAFC-----YWGWRAAGGGPD 78 Query: 68 ACAIE-------FIHTATLLHDDVVDDSALRRGKVAA----------------RLVWGNQ 104 IE + + L+HDD++D S RRG A R +G Sbjct: 79 EPGIERAAAALELLQASALVHDDLMDRSDTRRGLPAVHRRFENLHRAGGWRGDREQYGAS 138 Query: 105 TSVLVGDFLL---SQAF-CMVIETKS-QEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 +VL+GD LL + F C + T + A L+ + G+ + D T+ Sbjct: 139 AAVLLGDLLLIWCDELFQCSGLPTGAVSSAKPVFDLMRTEVMLGQYLDVLEPVAGDSTDA 198 Query: 160 DYLHVIKSKTAVLFSAA-------LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 D L +++T + + +A L+V +L+AG + AL +G+ LG AFQL DD+L Sbjct: 199 DALD--RARTVLHYKSAKYTIERPLQVGALLAGAGPDLVDALGGFGLPLGEAFQLRDDLL 256 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G+ GK G+D R GK TL V A + Sbjct: 257 GVFGDPAVTGKPAGDDLREGKRTLLVAHAMR 287 >gi|227873689|ref|ZP_03991923.1| possible Farnesyltranstransferase [Oribacterium sinus F0268] gi|227840478|gb|EEJ50874.1| possible Farnesyltranstransferase [Oribacterium sinus F0268] Length = 175 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 48/80 (60%) Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 +TEE+ + K KTA L SA+LE+ +L+ G ++ L S+G +G+AFQ+ DD+LD Sbjct: 43 LTEEELFFIYKKKTAALLSASLEIGALLGGANPEEQEKLSSFGEKIGLAFQIRDDILDEI 102 Query: 216 GEVNEMGKNIGEDFRNGKPT 235 +E+GK I D K T Sbjct: 103 SSFSELGKPIHSDAEQAKTT 122 >gi|167565893|ref|ZP_02358809.1| polyprenyl synthetase [Burkholderia oklahomensis EO147] gi|167572980|ref|ZP_02365854.1| polyprenyl synthetase [Burkholderia oklahomensis C6786] Length = 222 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 18/214 (8%) Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKS 126 IH +L+ DD+ +D+ R GK + + T++L D L+SQAF + E T Sbjct: 1 MIHVFSLIQDDLPAMDNDDTRHGKPSLHTKYDVATALLACDGLISQAFLTLSEIPLPTDG 60 Query: 127 QEALE---ALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + AL A S+ + L G+ L S+ +L+ E + +H + KT L A++ + L Sbjct: 61 RVALAHELASSIGSSGLTGGQYIDLTSVGTHLNREELERMH--RMKTGALIRASVRMGVL 118 Query: 183 IAGV----QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 ++ A+ YG LG+A+Q+VDD+LD +++ +GK G+D + KPT Sbjct: 119 CGSGCRTESSAAWNAMGEYGNLLGLAYQVVDDILDSTSDLSTLGKTAGKDAQVNKPTYVT 178 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 +L R W + ++ N K F+ Sbjct: 179 MLGLD--ASRAWAHWLADEALAALAPFNAKADFL 210 >gi|325095662|gb|EGC48972.1| geranylgeranyl diphosphate synthase [Ajellomyces capsulatus H88] Length = 375 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 19/216 (8%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK LR A L ++ + + +HTA+LL DDV D S LRRG Sbjct: 73 YMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLVDDVEDSSTLRRGVP 132 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + K+ + L G+ + L Sbjct: 133 VAHNIFGTAQTINSANYVYFLALEEVQKLKNPNVINIYVKELLNLHRGQGMDVFWRDTLT 192 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-------LGIAFQL 207 TEEDYL ++ +KT LF A++ + QA G++ +G+ FQ+ Sbjct: 193 CPTEEDYLEMVGNKTGGLFRLAIK-----------LMQAESDTGIDCVTLVNLMGLIFQI 241 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 DD L+ K ED GK + P+I + + Sbjct: 242 CDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIR 277 >gi|506378|gb|AAA96328.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 157 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 17/158 (10%) Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--K 125 A+E +HT +L+ DD+ +D+ LRRGK V+G ++L G LL+ AF + E Sbjct: 1 AVEMMHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVS 60 Query: 126 SQEALEALSLVACT-----LAEGELRQLS---LSKNLDVTEED--YLHVIKSKTAVLFSA 175 S++ + A+ +A + L G+ + LS L +N DV ED Y+HV KT L A Sbjct: 61 SKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQN-DVGLEDLEYIHV--HKTGSLLEA 117 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 + + ++I G + ++++ +G+ FQ+VDD+LD Sbjct: 118 SAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILD 155 >gi|328860517|gb|EGG09623.1| hypothetical protein MELLADRAFT_47465 [Melampsora larici-populina 98AG31] Length = 366 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 15/226 (6%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S+ +++ + YL GK +R M+ A L+ ++ + +HTA+LL DDV Sbjct: 59 SNEQILLEPYTYLTNIPGKEIRSMMIDAFNHWLQVPRPALEIIKKIVGQLHTASLLMDDV 118 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 DDS LRRG ++G ++ +++ A+ + + K +A + + +L E Sbjct: 119 EDDSDLRRGVPVTHKIYGIPQTINTANYVYFLAYQELTKLKPCLRSDATTDL-WSLVNDE 177 Query: 145 LRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L QL + +D+ TEE+YL ++ +KT LF A+++ ++ + + L Sbjct: 178 LLQLHRGQGMDLYWRDSLTCPTEEEYLQMVNNKTGGLFRIAIKLMIALSPIPET-PDYLP 236 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG--EDFRNGKPTLPVI 239 + +GI FQ+ DD+L+ V KN G ED GK + P++ Sbjct: 237 LVNL-VGIIFQIRDDLLNLSSVVG-YTKNKGFCEDLTEGKFSFPIV 280 >gi|154271672|ref|XP_001536689.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces capsulatus NAm1] gi|150409359|gb|EDN04809.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces capsulatus NAm1] Length = 375 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 19/216 (8%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK LR A L ++ + + +HTA+LL DDV D S LRRG Sbjct: 73 YMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLVDDVEDSSTLRRGVP 132 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + KS + L G+ + L Sbjct: 133 VAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYVKELLNLHRGQGMDVFWRDTLT 192 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-------LGIAFQL 207 TE+DYL ++ +KT LF A++ + QA G++ +G+ FQ+ Sbjct: 193 CPTEDDYLEMVGNKTGGLFRLAIK-----------LMQAESDTGIDCVTLVNLMGLIFQI 241 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 DD L+ K ED GK + P+I + + Sbjct: 242 CDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIR 277 >gi|240272920|gb|EER36445.1| geranylgeranyl diphosphate synthase [Ajellomyces capsulatus H143] Length = 392 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 27/215 (12%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK LR A L ++ + + +HTA+LL DDV D S LRRG Sbjct: 101 YMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLVDDVEDSSTLRRGVP 160 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++GN + FC ++ + L EG ++ Sbjct: 161 VAHNIFGNGS---------DDKFCELLPRSGRGTETQKPECDKHLREGIVKPAPRDTLTC 211 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-------LGIAFQLV 208 TEEDYL ++ +KT LF A++ + QA G++ +G+ FQ+ Sbjct: 212 PTEEDYLEMVGNKTGGLFRLAIK-----------LMQAESDTGIDCVTLVNLMGLIFQIC 260 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 DD L+ K ED GK + P+I + + Sbjct: 261 DDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIR 295 >gi|260899213|ref|ZP_05907608.1| geranyltranstransferase [Vibrio parahaemolyticus AQ4037] gi|308106680|gb|EFO44220.1| geranyltranstransferase [Vibrio parahaemolyticus AQ4037] Length = 234 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 14/204 (6%) Query: 68 ACAIEFIHTATLLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A AIE IH +L+HDD+ LRRG+ + + T++L GD L + AF ++ + Sbjct: 8 ASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAFTIIADGP 67 Query: 126 SQEALE----------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 + E A S A + G+ L ++N V+ + + + KT L Sbjct: 68 LSPSAENQRVNMIKALAHSSGANGMCVGQALDLG-AENRQVSLAEMEEIHRKKTGALIDC 126 Query: 176 ALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A+++ +L AG + V L+ Y +G+AFQ+ DD+LD + +GK G D K Sbjct: 127 AVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKS 186 Query: 235 TLPVILAFQRGTKREKNFWKSTIN 258 T P +L + ++ + + Sbjct: 187 TYPSLLGLEGAIEKAHTLLQEALQ 210 >gi|196004414|ref|XP_002112074.1| hypothetical protein TRIADDRAFT_24460 [Trichoplax adhaerens] gi|190585973|gb|EDV26041.1| hypothetical protein TRIADDRAFT_24460 [Trichoplax adhaerens] Length = 286 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 5/215 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +Y++ GK +R L A L+ D ++ ++ +H A+LL DD+ D+S LRRG Sbjct: 5 QYIVQIPGKEIRVKLIQAFNNWLQIPEDKLAAISSVVQMLHNASLLIDDIEDNSKLRRGV 64 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQLSLSKN 153 A ++G ++ +++ +A ++ + ++ + L +G+ L L + Sbjct: 65 PVAHQIFGLAQTINAANYVYFKAMHEILSLNHPDGVKIFTEEMLELHQGQGLDILWRDSH 124 Query: 154 LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 +EE+Y ++ KT LF A+ + L + + + L L + FQ+ DD + Sbjct: 125 NCPSEEEYKMMVNKKTGGLFRLAVNLMQLFSENKRNFTPLLNY----LSLFFQIGDDYAN 180 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + K+ ED GK + P+I A T R Sbjct: 181 LQSTQYSKNKSFCEDLTEGKFSFPIIHAAHTETGR 215 >gi|320096193|ref|ZP_08027782.1| polyprenyl synthetase [Actinomyces sp. oral taxon 178 str. F0338] gi|319976874|gb|EFW08628.1| polyprenyl synthetase [Actinomyces sp. oral taxon 178 str. F0338] Length = 364 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 40/247 (16%) Query: 41 GGKRLRPMLT-----LATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGKR R +L LA L+ L+ A+E + L HDD++D + RRG+ Sbjct: 49 GGKRFRGILAHVGHCLARGGPLDEA--PVAPLSAALELYQASALAHDDIIDHARTRRGRP 106 Query: 96 AARL---------VW-------GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 + W G ++LVGD L S A + + + A + + Sbjct: 107 TPHVSLAALHHDRAWRGDPDRFGEAGAILVGDLLFSWAEAAMADQADRLAPRDAARLWAR 166 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV----------------SSLI 183 + +++L + LDV E A+ AA+EV ++ Sbjct: 167 YSRMHA-EVALGQFLDVAAEQAPLDPGDPGAMDTEAAMEVVVRKSARYSIVHPAALGAIC 225 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G +++ A++S G+AFQL DD L G+ GK G+D R GK T+ + LA+Q Sbjct: 226 GGADDALITAIESILTPWGMAFQLRDDHLGVFGDPELTGKPSGDDIREGKRTVLLALAWQ 285 Query: 244 RGTKREK 250 R T E+ Sbjct: 286 RATDSER 292 >gi|260785488|ref|XP_002587793.1| hypothetical protein BRAFLDRAFT_60406 [Branchiostoma floridae] gi|229272946|gb|EEN43804.1| hypothetical protein BRAFLDRAFT_60406 [Branchiostoma floridae] Length = 309 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 7/228 (3%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +Y+ GK++R L A L+ D ++ ++ +H A+LL DD+ D+S LRRG Sbjct: 25 EYVCQVPGKQIRLQLIEAFNYWLQIPQDKLQTISNVVQMLHNASLLIDDIEDNSKLRRGI 84 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G ++ +++ + V+ E + L +G+ + Sbjct: 85 PVAHSIYGTAHTINCANYVYFKGLATVLMLNHPECTRIFTEQLLELHQGQGMDIYWRDTT 144 Query: 155 DVT-EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 EE+Y ++K KT LF A+++ L + ++ LG+ FQ+ DD + Sbjct: 145 TCPREEEYKVMVKKKTGGLFGLAVKLMQLFSDNKSD----FVPLSDTLGLYFQIRDDFAN 200 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVI--LAFQRGTKREKNFWKSTIND 259 + K+ ED GK + P+I + ++GT + + + ND Sbjct: 201 LMSKEYTENKSYCEDLTEGKFSFPIIHGVHHEQGTTQILSILRQKTND 248 >gi|269956783|ref|YP_003326572.1| polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269305464|gb|ACZ31014.1| Polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 365 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 71/249 (28%), Positives = 105/249 (42%), Gaps = 50/249 (20%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV---------W-------GNQTSVL 108 V A+E A LLHDDV+D S RRG+ A W G ++L Sbjct: 78 VRTGAALELFQAAALLHDDVMDASDTRRGQPTAHRAFEARHATAGWAGEPVRFGESAAIL 137 Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR--------QLSLSKNLDV---- 156 +GD C+V +E EAL+ + AE +R ++ + + LDV Sbjct: 138 LGDL------CLV--ATQREIAEALAPLPRERAEA-VRAAFDTMQSEVIVGQYLDVLVQA 188 Query: 157 ---------TEEDYLHVIKSKT-AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 EE VI++KT + L V +LIAG + A+ + G+ LG AFQ Sbjct: 189 EPWGLDPHADEERARAVIRAKTTSYSVRQPLVVGALIAGATPAQVAAVAAVGLPLGEAFQ 248 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS--- 263 L DDVL G+ GK G+D R GK T+ G ++ + D ++ Sbjct: 249 LRDDVLGVFGDPEVTGKPAGDDLREGKRTVLAARTMAAGDAAQRALLAERLGDAHLTDDD 308 Query: 264 VENLKKAFI 272 V L++A + Sbjct: 309 VAALREAVV 317 >gi|145240169|ref|XP_001392731.1| farnesyltranstransferase [Aspergillus niger CBS 513.88] gi|134077245|emb|CAK45586.1| unnamed protein product [Aspergillus niger] Length = 389 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 19/216 (8%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK +R L A + L+ ++ ++ + +HTA+LL DDV D+S LRRG Sbjct: 97 YMLQHPGKDIRRQLINAFNVWLKVPPESLSIITKVVAMLHTASLLIDDVEDNSILRRGIP 156 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + + A++ L G+ L L Sbjct: 157 VAHNIYGTAQTINSANYVYFLALQEVQKLNNPAAIDIYVQELLNLHRGQGMDLFWRDTLT 216 Query: 156 VTEED-YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-------LGIAFQL 207 ED YL ++ +KT LF A++ + QA S G + +G+ FQ+ Sbjct: 217 CPSEDEYLEMVGNKTGGLFRLAVK-----------LMQAESSSGKDCVSLVNVMGLIFQI 265 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 DD L+ K + ED GK + P+I + + Sbjct: 266 CDDYLNLSNTTYTKNKGLCEDLTEGKFSFPIIHSIR 301 >gi|254572275|ref|XP_002493247.1| Geranylgeranyl diphosphate synthase, increases the intracellular pool of geranylgeranyl diphosphate [Pichia pastoris GS115] gi|238033045|emb|CAY71068.1| Geranylgeranyl diphosphate synthase, increases the intracellular pool of geranylgeranyl diphosphate [Pichia pastoris GS115] gi|328352737|emb|CCA39135.1| hypothetical protein PP7435_Chr3-0163 [Pichia pastoris CBS 7435] Length = 336 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 19/228 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 ++I + KY+ GK R +L LE + + I+ +H ++L+ DDV D Sbjct: 17 KLITEPYKYIKKVPGKHFRRILIDLFNEFLEVDHQSVESIEQVIDILHNSSLMVDDVEDS 76 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 + LRRG A V+G ++ +++ + + I+ L + V L E E+ Sbjct: 77 ATLRRGIPATHNVFGIPQTINTANYM----YFVAIQKAG--TLGNHARVNDVLIE-EMMN 129 Query: 148 LSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ---ALK 195 L + LD+ +EE YL ++ +KT LF + + L+ + V + +L Sbjct: 130 LHRGQGLDLYWRDNFVCPSEEQYLDMVMNKTGGLFRLTVRLMELVQNPNDGVERKASSLV 189 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + LGI +Q+ DD L+ + + K ED GK + P+I + Q Sbjct: 190 HFANLLGIVYQIRDDYLNLKSDQYNQNKGFCEDITEGKFSFPIIHSIQ 237 >gi|182440623|ref|YP_001828342.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178469139|dbj|BAG23659.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 425 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 84/296 (28%), Positives = 119/296 (40%), Gaps = 57/296 (19%) Query: 34 VKYLIFSGGKRLRPML---TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 V GGKR+RP L + + E + L A+E I + L+HDDV+D S L Sbjct: 76 VADFTLDGGKRVRPRLLWWGMRSCGAAET--TAALRLGVALELIQSCALIHDDVMDRSRL 133 Query: 91 RRGKVAARL----------------VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 RRGK A + +G +VL GD L+ A V ET ALS Sbjct: 134 RRGKPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDLALAWADDTVAET-------ALS 186 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-----------KTAVLFSAALEVS--- 180 V + L + ++ YL + +TA L SA+ V Sbjct: 187 AVQRR----RIGPLWRAMRTEMVAGQYLDLRGQVRGGSSVEQALRTACLKSASYSVERPL 242 Query: 181 ---SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +AG + AL+S G GIAFQL DD+L G+ GK G+D R GK T Sbjct: 243 ALGAALAGADEATTDALRSAGRCAGIAFQLRDDLLGVFGDPELTGKPSGDDIREGKSTY- 301 Query: 238 VILAFQR------GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287 +LA R G +R G ++ E+L + ++ A E +A Sbjct: 302 -LLAVARRWAEAAGDERSLAVLGRVPGGGDLAEEDLAEVRGVLEATGARAHVERKA 356 >gi|256831589|ref|YP_003160316.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603] gi|256685120|gb|ACV08013.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603] Length = 345 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 102/239 (42%), Gaps = 38/239 (15%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVL----------LACAIEFIHTATLLHDDVVDDSALR 91 G+++RP L L L +R + L +A AIE +HT+ L+HDDV+D +R Sbjct: 39 GRQIRPRLFLEVYAALSHREKHPHLRVTERPEIQQVAHAIELLHTSFLIHDDVIDHDTMR 98 Query: 92 RGKV-----------------AARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEA 129 RG A GN +L G L++A V + Q Sbjct: 99 RGHTNINGHFELVALSSGASAADAHTLGNTAGILGGVLALTEALMQVAALDFPHRQRQRL 158 Query: 130 LEALSLVACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQ 187 L A A GEL + S + D + + + KTA F + +++++A Sbjct: 159 LTAFQEAISLSALGELLDVHSATIPAPTPMTDTITIAELKTAEYSFVLPMRLAAMMADDA 218 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 N+ AL G +LG+A+QL DD+ + GK +G D R K TL ++A R T Sbjct: 219 NT--DALAGVGRHLGVAYQLHDDLNGVFAPTSVTGKEVGADLRENKDTL--LIAHARTT 273 >gi|295394724|ref|ZP_06804939.1| polyprenyl synthetase [Brevibacterium mcbrellneri ATCC 49030] gi|294972320|gb|EFG48180.1| polyprenyl synthetase [Brevibacterium mcbrellneri ATCC 49030] Length = 354 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 30/245 (12%) Query: 41 GGKRLRPMLTLATALMLEYRGDNH---VLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GGKR+R LAT + G H +A ++E +H A L+HDD++D+S +RRG + Sbjct: 49 GGKRIR---ALATWWGYQLAGGTHPGIAHMAASVELLHAAALIHDDIIDNSDMRRGNPST 105 Query: 98 RLVW----------GNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACTLAEGEL 145 + G+ S + +++ C+ + + + L + Sbjct: 106 HAFFSQMHGSAGFEGDARSFGINAAIIAGDVCLGLSEQLFNASGLNVTDPNVRATHDAFR 165 Query: 146 RQLSLSKNLDVTEE-----DYLHVIKSKTAVLFSAA-------LEVSSLIAGVQNSVRQA 193 R + + + LD+ + D V ++ + + +A E+ + +AG + Sbjct: 166 RDVMMGQYLDIRIQAAPVPDSQIVDRAMEVLTYKSAKYSVEQPFELGARLAGAKPQFVHD 225 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L ++ + LG AFQL DD L G+ GK G+D GK T+ V LA R + ++ Sbjct: 226 LSAFTLPLGQAFQLRDDELGVFGDPQATGKPAGDDLVEGKKTVLVGLALARMNDEDARWF 285 Query: 254 KSTIN 258 + + Sbjct: 286 RERLG 290 >gi|284031785|ref|YP_003381716.1| polyprenyl synthetase [Kribbella flavida DSM 17836] gi|283811078|gb|ADB32917.1| Polyprenyl synthetase [Kribbella flavida DSM 17836] Length = 367 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 21/203 (10%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLV---W------------GNQTSVLVGDFLL 114 ++E +H L+ DDV+DDSA RRG + W G +VL+ D L Sbjct: 88 SLELLHAFALIQDDVMDDSATRRGSATVHVQLAHWAERQRRPVGAQFGRSAAVLLSDLCL 147 Query: 115 SQAFCMVIET-----KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169 A M+ E+ +AL L+ LA G+ L + + L + + K+ Sbjct: 148 VWAERMLRESGLPAESLAKALPVYDLLRSELAVGQFSDLLNENSAAPSLNAVLDIARRKS 207 Query: 170 A-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 LE+ ++ AG V AL+ YG +G AFQL DD+L G+ GK +G+D Sbjct: 208 GNYTVLRPLELGAVAAGCSPQVLAALRQYGTAIGEAFQLRDDLLGVFGDPLVTGKPLGDD 267 Query: 229 FRNGKPTLPVILAFQRGTKREKN 251 K T V+ A + E+ Sbjct: 268 LYQAKATTIVVAAGELAGDTERR 290 >gi|225557933|gb|EEH06218.1| geranylgeranyl pyrophosphate synthase [Ajellomyces capsulatus G186AR] Length = 403 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 35/224 (15%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK LR A L ++ + + +HTA+LL DDV D S LRRG Sbjct: 101 YMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLVDDVEDSSTLRRGVP 160 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + K+ + + EL L + +D Sbjct: 161 VAHNIFGTAQTINSANYVYFLALEEVQKLKNPNVI--------NIYVKELLNLHRGQGMD 212 Query: 156 V---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN------ 200 V TEEDYL ++ +KT LF A++ + QA G++ Sbjct: 213 VFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIK-----------LMQAESDTGIDCVTLVN 261 Query: 201 -LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G+ FQ+ DD L+ K ED GK + P+I + + Sbjct: 262 LMGLIFQICDDYLNLSNSTYSKNKGPCEDLTEGKFSFPIIHSIR 305 >gi|330919993|ref|XP_003298844.1| hypothetical protein PTT_09671 [Pyrenophora teres f. teres 0-1] gi|311327775|gb|EFQ93059.1| hypothetical protein PTT_09671 [Pyrenophora teres f. teres 0-1] Length = 418 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 6/210 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL GK +R A L L+ + ++ + +HTA+LL DDV D S LRRG Sbjct: 132 YLYGHPGKDIRSQCIAAFNLWLKVPPERLEVITKVVGMLHTASLLVDDVEDSSVLRRGIP 191 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ +A +++ + + +E + L G+ L +L Sbjct: 192 VAHAIFGTPQTINSANYVYFRALSLLLSMNNPKLIEIFTEELLNLHRGQGMDLYWRDSLT 251 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +E DYL ++ +KT LF A+++ + A + V A +G+ FQ++DD L+ Sbjct: 252 CPSEADYLEMVGNKTGGLFRLAIKL--MQAESETDVDCA--PLVSTIGLLFQILDDHLNL 307 Query: 215 RGEVNEMG-KNIGEDFRNGKPTLPVILAFQ 243 K + ED GK + PVI A + Sbjct: 308 SPTSGYTTLKGLCEDLTEGKFSFPVIHAIR 337 >gi|284053405|ref|ZP_06383615.1| polyprenyl synthetase [Arthrospira platensis str. Paraca] Length = 116 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 5/120 (4%) Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G+AFQ+VDD+LD+ G +GK D ++G T P + A EK F ++ I+ Sbjct: 1 GLAFQIVDDILDFTGSTESLGKPAASDLKSGNLTAPTLFAL-----AEKPFLETLIDREF 55 Query: 262 ISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +L++A +++E+ + + A + Q A + + LP S +++L+E+ D+ + R+ Sbjct: 56 AQDGDLEQAIALIQESSGIDKSRELAIHHAQVAVEHINQLPPSESRQALVELGDYVVSRI 115 >gi|295674851|ref|XP_002797971.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides brasiliensis Pb01] gi|226280621|gb|EEH36187.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides brasiliensis Pb01] Length = 407 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 5/209 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK +R L A L ++ ++ + +HTA+LL DDV D S LRRG Sbjct: 101 YMVQQPGKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLVDDVEDSSNLRRGVP 160 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + +S A+ L G+ + L Sbjct: 161 VAHNIFGTAQTINSANYVYFLALEEVQKLRSPNAINVYVKELLNLHRGQGMDVFWRDTLT 220 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEE+YL ++ +KT LF A++ + ++ + +G+ FQ+ DD L+ Sbjct: 221 CPTEEEYLEMVGNKTGGLFRLAIK----LMQAESDTEIDCVALANLMGLIFQICDDYLNL 276 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 K + ED GK + P+I + + Sbjct: 277 SNSTYTKNKGLCEDLTEGKFSFPIIHSIR 305 >gi|189198934|ref|XP_001935804.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187982903|gb|EDU48391.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 418 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 6/210 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL GK +R A L L+ + ++ + +HTA+LL DDV D S LRRG Sbjct: 132 YLYGHPGKDIRSQCIAAFNLWLKVPPERLEVITKVVGMLHTASLLVDDVEDSSVLRRGIP 191 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ +A +++ + + +E + L G+ L +L Sbjct: 192 VAHAIFGTPQTINSANYVYFRALSLLLSMSNPKLIEIFTEELLNLHRGQGMDLYWRDSLT 251 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +E DYL ++ +KT LF A+++ + A + V A +G+ FQ++DD L+ Sbjct: 252 CPSEADYLEMVGNKTGGLFRLAIKL--MQAESETDVDCA--PLVSTIGLLFQILDDHLNL 307 Query: 215 RGEVNEMG-KNIGEDFRNGKPTLPVILAFQ 243 K + ED GK + PVI A + Sbjct: 308 SPTSGYTTLKGLCEDLTEGKFSFPVIHAIR 337 >gi|255937223|ref|XP_002559638.1| Pc13g12220 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584258|emb|CAP92291.1| Pc13g12220 [Penicillium chrysogenum Wisconsin 54-1255] Length = 369 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 63/267 (23%), Positives = 115/267 (43%), Gaps = 24/267 (8%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK +R L A L+ + ++ + +HT++LL DDV D+S LRRG Sbjct: 76 YVHEHPGKDIRRQLIHAFNAWLQVPPASLSIITKVVTMLHTSSLLIDDVEDNSVLRRGIP 135 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + + A++ L G+ L L Sbjct: 136 VAHNIFGTAQTINSANYVYFLALQEVQQLNNPAAIDIYVQEMLNLHRGQGMDLFWRDTLT 195 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-------LGIAFQL 207 TE++YL ++ +KT LF A++ + QA + G + +G+ FQ+ Sbjct: 196 CPTEDEYLEMVGNKTGGLFRLAVK-----------LMQAESTTGKDCVALVNVMGLIFQI 244 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTINDGKI--- 262 DD L+ V K ED GK + P+I + + + N K D ++ Sbjct: 245 CDDYLNLSSTVYTENKGFCEDLTEGKFSFPIIHSIRSNPSNHQLINILKQNTKDPEVKRY 304 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYS 289 +V+ +K +R + D +A++ Sbjct: 305 AVQYMKNTGSFAHTSRVVRDLRDQAFA 331 >gi|126180126|ref|YP_001048091.1| polyprenyl synthetase [Methanoculleus marisnigri JR1] gi|125862920|gb|ABN58109.1| Polyprenyl synthetase [Methanoculleus marisnigri JR1] Length = 295 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 7/209 (3%) Query: 12 MEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRP--MLTLATALMLEYRGDNHVL- 66 +EK+ ++ +RI + E D + S GKR+R +L + L L Sbjct: 8 LEKIRPVVDRRIAETAGGEGEIDSAVLALLSKGKRMRAGLLLYIHAGLARTAAPTRQALD 67 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LACA+E H A+L+ DD++D RRG + L G +VL +L+ + + + Sbjct: 68 LACAVELAHAASLILDDMLDGDTARRGVPSLHLTRGEGRAVLDAVGILALPYALAAPYGA 127 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ +A G ++ +L E Y ++ KT LFS A +++ G Sbjct: 128 GY-VTMLASAQRKMARGVAWEMLGGPDLPAAEL-YDAIVARKTGCLFSLAAAWGAMVTGK 185 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 +++V A +G+ G A Q+ DD+ D R Sbjct: 186 EDAVVAAFGEFGLAAGKAMQVADDIADLR 214 >gi|326915522|ref|XP_003204065.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Meleagris gallopavo] Length = 299 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 5/213 (2%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 I + +YL+ GK++R L+ A L D ++ E +H A+LL DD+ D+S Sbjct: 11 ILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDIEDNSK 70 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG A ++G + + +++ V+ +A++ + L +G+ + Sbjct: 71 LRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHKGQGLDIY 130 Query: 150 LSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 TE +Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ Sbjct: 131 WRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNT----LGLFFQIR 186 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 DD + + K+ ED GK + P I A Sbjct: 187 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 219 >gi|318059311|ref|ZP_07978034.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces sp. SA3_actG] Length = 370 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 82/317 (25%), Positives = 125/317 (39%), Gaps = 64/317 (20%) Query: 33 VVKYLIFS---GGKRLR---------------PMLTLATALMLEYRGDNHVLLACAIEFI 74 V ++L + GG+RLR P T+A AL + A+E + Sbjct: 48 VAQWLAATTRGGGRRLRSAFVWWGLRVACPAPPPGTVAAALTV----------GAAVELL 97 Query: 75 HTATLLHDDVVDDSALRRGKVA---------------ARLVWGNQTSVLVGDFLLSQAFC 119 + L+ DDV+D+S +RRG+ A L +G +VL GD + A Sbjct: 98 QSCALVQDDVMDNSPVRRGQPALHVLLGSTRPAAAGPGALGFGQSAAVLAGDLAMVWAED 157 Query: 120 MVIETKSQEALEA-----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 + + A S++ + G+ L L+ D + H ++ TAVL S Sbjct: 158 TFADAHPPPEVAAPVRRLWSVLRTEMIAGQY--LDLAGQADASHS-ATHALR--TAVLKS 212 Query: 175 AALEVS------SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 V+ +L+A V + L++ G G+AFQL DD+L G+ GK GED Sbjct: 213 GRYSVARPLELGALLAAAPPEVCRVLRAAGGAAGLAFQLRDDLLAVWGDPAHTGKPTGED 272 Query: 229 FRNGKPTLPVILAFQR-----GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283 R GKPTL L F R G R + +T + + A R A Sbjct: 273 IREGKPTLLAALGFSRAAARPGGPRSPSCGAATATRRPVPPNSPPYAKSWRRPAPAATSR 332 Query: 284 EYRAYSYGQKAKDSLRC 300 S+ +A+ RC Sbjct: 333 RTSPASWAGRARTWRRC 349 >gi|5678609|emb|CAA08918.2| dimethylallyltransferase [Agrotis ipsilon] Length = 427 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 41/256 (16%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYR----GDN-HV--LLACAIEFIHT 76 +P+ K+L GK+ R + T+ MLE + +N H+ ++ +IE HT Sbjct: 112 VPEASKWLAKLLQYNVPNGKKNRGLATVLAYKMLEKKENLTPENIHLANMMGWSIEMFHT 171 Query: 77 ATLLHDDVVDDSALRRGKVA--------------ARLVWGNQTSVLVGDFLLSQAFCMVI 122 LL +D+++ + +RRG A L+ S L F + V+ Sbjct: 172 HQLLLNDIMEGAEMRRGAPCWYKHPEVGLSGINDAALIQAAMFSTLKRHFNNKFFYKSVL 231 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT---EEDYLHVIKSKTAV-LFSAALE 178 ET ++ L+ C++ Q++ + D+T E Y + K KT+ F + Sbjct: 232 ETFNE------MLLKCSIGHFLENQMAKTDKPDLTLFTMEKYEAITKYKTSYHTFQMPVT 285 Query: 179 VSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++ L+ GV++ + RQA K+ + +G FQ+ DD LD G+ GKN G D ++GK T Sbjct: 286 LALLMTGVEDPETHRQA-KNILLKMGEFFQIQDDFLDCFGDPAVTGKN-GTDIQDGKCTW 343 Query: 237 PVILAFQRGTKREKNF 252 ++A QR T ++K F Sbjct: 344 LAVVALQRATPKQKQF 359 >gi|224047852|ref|XP_002194762.1| PREDICTED: similar to geranylgeranyl pyrophosphate synthetase [Taeniopygia guttata] Length = 299 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 5/213 (2%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 I + +YL+ GK++R L+ A L D ++ E +H A+LL DD+ D+S Sbjct: 11 ILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIDVTEMLHNASLLVDDIEDNSK 70 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG A ++G + + +++ V+ +A++ + L +G+ + Sbjct: 71 LRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHKGQGLDIY 130 Query: 150 LSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 TE +Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ Sbjct: 131 WRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNT----LGLFFQIR 186 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 DD + + K+ ED GK + P I A Sbjct: 187 DDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 219 >gi|169763336|ref|XP_001727568.1| farnesyltranstransferase [Aspergillus oryzae RIB40] gi|238489227|ref|XP_002375851.1| geranylgeranyl diphosphate synthase [Aspergillus flavus NRRL3357] gi|83770596|dbj|BAE60729.1| unnamed protein product [Aspergillus oryzae] gi|220698239|gb|EED54579.1| geranylgeranyl diphosphate synthase [Aspergillus flavus NRRL3357] Length = 389 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 5/209 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK +R L A L+ ++ ++ + +HTA+LL DDV D S LRRG Sbjct: 91 YMLQHPGKDIRRQLINAFNEWLKVPAESLAIITKVVTMLHTASLLIDDVEDCSILRRGAP 150 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + + A++ L G+ L L Sbjct: 151 VAHNIYGTAQTINSANYVYFLALQEVQKLNNPAAIDIYVQELLNLHRGQGMDLFWRDTLT 210 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +EE+YL ++ +KT LF A++ + +++ + S LG+ FQ+ DD L+ Sbjct: 211 CPSEEEYLEMVGNKTGGLFRLAIK----LMQAESATGKDCVSLVNVLGLIFQICDDYLNL 266 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 K + ED GK + P+I + + Sbjct: 267 SNTTYTKNKGLCEDLTEGKFSFPIIHSIR 295 >gi|6831550|sp|Q92236|GGPPS_GIBFU RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|1524045|emb|CAA65644.1| geranylgeranyl pyrophosphate synthetase [Gibberella fujikuroi] Length = 418 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 5/206 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+I GK R L A + L+ + ++ + +H ++LL DDV D S LRRG Sbjct: 136 YVISHPGKDFRAQLIGAFNVWLDVPTSSLEVITRVVGMLHESSLLIDDVQDSSELRRGFP 195 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ G+++ A + + + E + S L G+ L L Sbjct: 196 VAHNIFGVAQTINSGNYIYFVALQELHKLNNPELITIFSDELVNLHRGQGMDLFWCDTLT 255 Query: 156 -VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL-GIAFQLVDDVLD 213 TEEDYL ++ +KT LF ++ L+A N +NL G+ FQ+ DD ++ Sbjct: 256 CPTEEDYLEMVGNKTGGLFRLGIK---LMAAEANGPSPTDCVPLVNLIGLIFQIRDDYMN 312 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVI 239 + K + ED GK + PVI Sbjct: 313 LSSKEYSHNKGMCEDLTEGKFSFPVI 338 >gi|49409613|gb|AAT65717.1| geranylgeranyl diphosphate synthase [Aspergillus flavus] Length = 340 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 75/296 (25%), Positives = 133/296 (44%), Gaps = 14/296 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 ++I V YL+ GK +R L A L D ++A + +HTA+LL DD+ D Sbjct: 54 KIIRGPVDYLLKCPGKDIRRKLMQAFNEWLRIPEDRLNIIAEIVGLLHTASLLIDDIQDS 113 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G ++ ++ A + E +A E + L G+ Sbjct: 114 SKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIFTEELLRLHRGQGMD 173 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 L +L TEE+Y+ +I +KT LF A+++ L + V + + LG+ FQ Sbjct: 174 LYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKLMQLESEVTSDFLGLVDL----LGVIFQ 229 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR--GTKREKNFWKSTINDGKISV 264 + DD + + ++ K ED GK + +I + G ++ N + + Sbjct: 230 IRDDYQNLQSDLYSKNKGFCEDLTEGKFSFLIIHSINSNPGNQQLLNILRQRSEE----- 284 Query: 265 ENLKK-AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS-SWKKSLMEVVDFCL 318 E++KK A +R + + R S+ +AK + L D+ + K + +++ F L Sbjct: 285 ESVKKYAVEYIRSTGSFAYCQDRLASFLHEAKMMVNVLEDNVGFSKGIYDILAFLL 340 >gi|110776978|ref|XP_001122899.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like, partial [Apis mellifera] Length = 310 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 5/217 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ + Y++ GK++R L A L+ + D + I+ +H A+LL DD+ D+ Sbjct: 19 EILLEPYNYILQVPGKQIRATLAHAFNYWLKIKSDKLRDIGDIIQLLHNASLLIDDIQDN 78 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ + A V+ E ++ L G+ + Sbjct: 79 SVLRRGIPVAHNIYGVASTMNAANYAIFIALEKVLALNHVEGIQIYLEQLLELHRGQGME 138 Query: 148 LSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + N + TE Y + KT LF+ A+ + L + ++ LG+ FQ Sbjct: 139 IYWRDNYICPTEAAYKQMTIQKTGGLFNLAVRLMQLFS----ECKEDFVPLTSILGLYFQ 194 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + DD + E K ED GK + P+I A + Sbjct: 195 IRDDYCNLSSEEYVDNKGYCEDLSEGKYSFPIIHAIR 231 >gi|121714909|ref|XP_001275064.1| geranylgeranyl pyrophosphate synthase (AtmG), putative [Aspergillus clavatus NRRL 1] gi|119403220|gb|EAW13638.1| geranylgeranyl pyrophosphate synthase (AtmG), putative [Aspergillus clavatus NRRL 1] Length = 359 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 5/221 (2%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATL 79 L+R + ++I + YL GK +R L + L+ ++ I +HTA+L Sbjct: 63 LQRKFTQEKIISAPLDYLSGFPGKDIRGKLISSFNEWLKIPEQKLDIIKRVIGLLHTASL 122 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT 139 L DD+ D S LRRG A ++G ++ +F A + + +AL + Sbjct: 123 LIDDIQDSSKLRRGFPVAHSIFGIAQTINSANFAYFWAQQELQKLGKSDALAIFTDELLR 182 Query: 140 LAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L G+ L +L TEE+YL ++ +KT LF A+++ + + QN R + Sbjct: 183 LHRGQGMDLYWRDSLICPTEEEYLDMVSNKTGGLFRLAIKLMQMES--QNE-RDCVPLVD 239 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + LGI FQ+ DD + + ++ K GED GK + P+I Sbjct: 240 L-LGIIFQIRDDYQNLQSDLYAKNKGFGEDITEGKFSYPII 279 >gi|257066522|ref|YP_003152778.1| Polyprenyl synthetase [Anaerococcus prevotii DSM 20548] gi|256798402|gb|ACV29057.1| Polyprenyl synthetase [Anaerococcus prevotii DSM 20548] Length = 278 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 11/210 (5%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA-LMLEYRGDNHVLLACAIEFIHTAT 78 +K+ S+ I + + Y SG KR+R L L L N +L A AIE I + Sbjct: 24 MKKYFSEDSKINEAMLYAADSG-KRIRASLFLENRRLHTNEISKNDLLFALAIEMIQAYS 82 Query: 79 LLHDDVVDDSA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA--LEALS 134 L+HDD+ RRGK + +G ++L GD LLS+A ++++ ++ L+A S Sbjct: 83 LVHDDLPAMDDDDYRRGKESVHKHYGEDLAILTGDALLSEASMLMMDVSLEDPSYLKAAS 142 Query: 135 LVACTLAEGEL---RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 + + + + + L L + E+ + V KT F A+ + ++ G + Sbjct: 143 YLMKKVGKDGMITGQILDLRRRKSYAEDFLVEVYDKKTGDFFKGAIVAAGIVNGYDEEII 202 Query: 192 QALKSYGMNLGIAFQLVDDVL--DYRGEVN 219 L+ Y LG+ FQ+ DD+L D++ E+N Sbjct: 203 AKLERYSYYLGLGFQIQDDLLEEDFKDEIN 232 >gi|119499417|ref|XP_001266466.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] gi|119414630|gb|EAW24569.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] Length = 714 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 6/181 (3%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H A+L+ DD+ D S LRRG+ A V+ ++ +FLL QA V + ++ Sbjct: 464 LHNASLMLDDIEDSSPLRRGRPATHTVFVVGQTINSANFLLIQAADQVRRLDDSQCMDIF 523 Query: 134 SLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVR 191 L G+ L ++ + +EE+YL +I++KT LF + + A QN S+ Sbjct: 524 MEEMRLLFRGQSFDLYWTRQGECPSEEEYLAMIRNKTGGLFRLIARLMAQKAPFQNHSLH 583 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +L+S LG FQ+ DD + E K ED GK + P+I A + R KN Sbjct: 584 TSLESMAGQLGEYFQIRDDYKNLTEEYTGQ-KGFCEDLDEGKFSFPLIHAL---SSRPKN 639 Query: 252 F 252 Sbjct: 640 L 640 >gi|13021724|gb|AAK11531.1| PaxG [Penicillium paxilli] Length = 371 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 20/265 (7%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL+ GK +R L + + L+ + ++ I +HTA+LL DD+ D S LRRGK Sbjct: 82 YLLAIPGKDIRSKLIDSFNIWLQLPEEKLSIVKDIINLLHTASLLIDDIQDASRLRRGKP 141 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL--SLVACTLAEG---ELRQLSL 150 A V+G ++ ++ + E A E SL+ L +G R + + Sbjct: 142 VAHDVYGVAQTINSANYAYYLQQARLKEIGDPRAFEIFTRSLLDLHLGQGMDLYWRDMVV 201 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 TEE+Y ++ KT LF+ AL+ + +Q+ LG+ FQ+ DD Sbjct: 202 CP----TEEEYTRMVMYKTGGLFNLALD----LMRIQSRKNTDFSKLVELLGVIFQIRDD 253 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTINDGKISVENLK 268 ++ + + K + ED GK + P+I + + + + + K D + + +K Sbjct: 254 YMNLQSGLYAEKKGLMEDLTEGKFSYPIIHSIRASPESSELLDILKQRTEDEAVKIRAVK 313 Query: 269 -----KAFIIMRENRALVDTEYRAY 288 +F RE + + E R Y Sbjct: 314 IMESTGSFQYTRETLSRLSAEARGY 338 >gi|291243150|ref|XP_002741463.1| PREDICTED: geranylgeranyl diphosphate synthase 1-like [Saccoglossus kowalevskii] Length = 310 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 5/226 (2%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 +L+R + ++ + YL GK +R LT L + ++ ++ +H A+ Sbjct: 13 LLERNGNQERILLEPFHYLRQVPGKEIRMKLTQGFNHWLNIPEEKLHVIGEVVQMLHNAS 72 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 LL DD+ D+S LRRG A ++G ++ +++ A ++ + + + + Sbjct: 73 LLIDDIEDNSKLRRGIPVAHNIYGIPHTINCANYVFFLALQKLLNLNNAQVTQVYTEQLL 132 Query: 139 TLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 +L EG+ + + TEE+Y ++ KT LF + + + + + K Sbjct: 133 SLHEGQGMDIWWRDAYVCPTEEEYKDMVIKKTGGLFGLGIRLMQIFS----ENKCDFKPL 188 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 NLG+ FQ+ DD + + + K+ ED GK + P+I A + Sbjct: 189 WENLGLYFQIRDDYANLKSPEYKENKSYAEDLTEGKFSFPLIHAIK 234 >gi|117164789|emb|CAJ88338.1| putative polyprenyl synthetase [Streptomyces ambofaciens ATCC 23877] Length = 352 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 24/240 (10%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---------------GNQTS 106 D V A A+E +H A ++HDD++DDS LR G A + + Sbjct: 71 DALVRAAAAMELVHAAAIVHDDLIDDSPLRHGLPTAHVALEAVLARDGRRRPRAAARSLA 130 Query: 107 VLVGDFLLSQAFCMVIETKSQEALEA-----LSLVACTLAEGE-LRQLSLSKNLDVTEED 160 +LVGD L++ A + + A A + +A L GE L L D Sbjct: 131 MLVGDHLMALAGQLFAGSGLPAAYLARARGLWAELARELVAGECLEILHTGGRPDTGTS- 189 Query: 161 YLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 L V++ KTA L + L+AG +R+A +YG+ LG AFQL DD+L G+ Sbjct: 190 -LKVVRYKTAKYTVEHPLLIGGLLAGAGPGLREAYSAYGLPLGEAFQLRDDLLGLFGDPE 248 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279 GK +D R +PT + ++ ++ + + + +L++ +MRE +A Sbjct: 249 RTGKAGLDDLRTHRPTALLAETWEAADASQRERLRGVLGRSDLDETHLREVRALMRELKA 308 >gi|67008259|emb|CAJ00343.1| putative geranylgerannylpyrophosphate synthase [Andrographis paniculata] Length = 140 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 12/134 (8%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQE--------ALEALSLVACTL 140 LRRG+ V+G T+VL GD LLS AF V E TK+ E A AL++ + L Sbjct: 1 LRRGRPTNHKVFGEDTAVLAGDALLSLAFNHVAEKTKNVEHCRVVRAIAELALAIGSEGL 60 Query: 141 AEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G++ L S + + + E +Y+HV KT++L AA ++ G +++ ++L+ Y Sbjct: 61 VAGQIVDLDSEGEKISLNELEYIHV--HKTSMLLEAAAVCGGILGGGESTEVESLRKYAR 118 Query: 200 NLGIAFQLVDDVLD 213 +G+ FQ+VDD+LD Sbjct: 119 CIGLLFQVVDDILD 132 >gi|325185255|emb|CCA19743.1| unnamed protein product [Albugo laibachii Nc14] Length = 293 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 18/245 (7%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +Y+ GK +R L A L L + + +H A+LL DD+ D+S LRRG+ Sbjct: 14 EYICELPGKNIRGKLVDAFQLWLNVAPGTSKAIKTIVNGLHDASLLIDDIEDNSDLRRGR 73 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-----LRQLS 149 A ++G ++ +++ + E ++ EA+ L +G+ R Sbjct: 74 PVAHHIYGIPATINCANYVYFLSLQRCQELQNAEAMSTYVTEMLRLHQGQGLDIYWRDQC 133 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 ++D +YL ++K+KT LF A+ + + + L L I FQ+ D Sbjct: 134 ACPSID----EYLEMVKNKTGGLFRLAVGMLQAFSDCRTDFTPLLDL----LSIYFQIRD 185 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTIND---GKISV 264 D ++ E K+ GED GK + P+I+ Q + N K D K ++ Sbjct: 186 DYVNLFDEAYMENKSFGEDLSEGKFSYPLIVGIQANLNDTRLLNIMKQRTKDIEVKKYAI 245 Query: 265 ENLKK 269 E L+K Sbjct: 246 EYLRK 250 >gi|122938158|gb|ABC46412.2| geranylgeranyl diphosphate synthase [Gibberella intermedia] Length = 392 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 4/211 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ K +R + + LE D ++ I +H ++L+ DD D+S LRRGK Sbjct: 102 YILTLPSKGIRGAFIDSLNVWLEVPEDETSVIKEVIGMLHNSSLI-DDFQDNSPLRRGKP 160 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + V+G ++ +++ +A + + +AL ++ T+ +G+ L + N Sbjct: 161 STHTVFGPAQAINTATYVIVKAIEKIQDIVGHDALADVTGTITTIFQGQAMDLWWTANAI 220 Query: 156 VTE-EDYLHVIKSKTAVLFSAALEVSSLI--AGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 V ++YL ++ +T LF +LE+ +L A + +S ++L S LG FQ+ DD + Sbjct: 221 VPSIQEYLLMVNDETGALFRLSLELLALNSEASISDSALESLSSAVSLLGQYFQIRDDYM 280 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + K ED GK +L +I A Q Sbjct: 281 NLIDNKYTDQKGFCEDLDEGKYSLTLIHALQ 311 >gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera] Length = 301 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 32/169 (18%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 I + ++Y + +GGKR N + ACA+E IHT +L+HDD+ +D+ Sbjct: 97 IHEAMRYSLLAGGKR-----------------SNAMPAACAVEMIHTMSLIHDDLPCMDN 139 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE---------ALSLVAC 138 LRRGK V+G +VL GD LL+ AF + S + A S+ A Sbjct: 140 DDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEHLATATSGVSSSRIVAAVGELAKSIGAE 199 Query: 139 TLAEGELRQLSLSKNLDVT--EEDYLHVIKSKTAVLFSAALEVSSLIAG 185 L G++ +S + DV + +++H+ KTA L AA+ + +L+ G Sbjct: 200 GLVAGQVVDISSTGQSDVGLDQLEFIHI--HKTAALLEAAVVLGALLGG 246 >gi|326505838|dbj|BAJ91158.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326514464|dbj|BAJ96219.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 342 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 22/209 (10%) Query: 28 EMIPDVVKYLIFSGG------KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 E I + +++ + G KR P+L +A +L + A A+E +H A+L+H Sbjct: 67 ESIHNAMRHAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAALPTAAALEMLHGASLVH 126 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALE------- 131 DD+ D + RRG+ + +G +VL GD L A+ VI T S + + Sbjct: 127 DDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVISRTPSPDPVSHAVLLRV 186 Query: 132 ----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A ++ + +A G+ L+ + L E + + V+ K + + +++ G Sbjct: 187 LAELARTVGSTGMAAGQFLDLAGASALG--EAEVMQVLTKKFGEMAECSAACGAMLGGAG 244 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 AL+ YG +G+ ++LVDD+ G Sbjct: 245 PDEEAALRRYGRAIGVLYELVDDMRSASG 273 >gi|297620258|ref|YP_003708395.1| putative geranyltranstransferase [Waddlia chondrophila WSU 86-1044] gi|297375559|gb|ADI37389.1| putative geranyltranstransferase [Waddlia chondrophila WSU 86-1044] Length = 315 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 25/205 (12%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + D Y + +GGKR+RP +TL A L GD L A +IE+ HTA+L+ DD+ +D+ Sbjct: 57 VRDACAYALSTGGKRVRPSITLMVADALGGMGDV-TLSALSIEYFHTASLVVDDMPSMDN 115 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK----SQEALEALSL-VACTLAE 142 RR + + +G ++LV L+ + M+ E Q A S+ + C LA Sbjct: 116 DDERRSQPSVHKKFGEAAALLVSYGLIGAGYGMIAENGRLLLDQNIFFADSVDLRCRLA- 174 Query: 143 GELRQLSLSKNL--------------DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L S + L D++ E +I KT+ LF A L G Sbjct: 175 --LENASFNTGLNGATGGQFLDIRPPDLSTETLKKIIHMKTSSLFEVAFVNGWLFGGGAL 232 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLD 213 +K + G+AFQ+ DD+ D Sbjct: 233 EKLDQVKQAAAHFGLAFQIADDLGD 257 >gi|62858985|ref|NP_001017122.1| geranylgeranyl diphosphate synthase 1 [Xenopus (Silurana) tropicalis] gi|89273784|emb|CAJ82104.1| ggps1 [Xenopus (Silurana) tropicalis] gi|111309089|gb|AAI21538.1| hypothetical protein LOC549876 [Xenopus (Silurana) tropicalis] Length = 296 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 21/216 (9%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYLLQLPGKQIRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ A+ + +L +L + L Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPNAVHVFT--------QQLLELHRGQGL 128 Query: 155 DV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 D+ TE +Y ++ KT LF A+ + L + ++ L + LG+ F Sbjct: 129 DIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSSYDKDLKPLLNT----LGLFF 184 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 Q+ DD + + K+ ED GK + P I A Sbjct: 185 QIRDDYANLNSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|328714372|ref|XP_001947385.2| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Acyrthosiphon pisum] Length = 327 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 21/217 (9%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK++R L A L+ D ++ ++ +H ++LL DD+ D+S LRRG Sbjct: 41 YIMQVPGKQIRAKLAHAFNYWLKIPSDKLAVIGDIVQMLHNSSLLTDDIQDNSVLRRGIP 100 Query: 96 AARLVWGNQTSVLVGDFL--------LSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 A ++G +++ +++ LS M +++ LE L G+ + Sbjct: 101 VAHSIYGVASTINAANYMSFVALERTLSLGHPMATTVYTEQVLE--------LHRGQGME 152 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + N TE++Y + KT LF A+ + L + +S K G+ LG+ FQ Sbjct: 153 IYWRDNYTCPTEDEYKKMTIRKTGGLFMLAIRLMQLFS---DSTNDFTKLTGI-LGLYFQ 208 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + DD + + K+ ED GK + P+I A Sbjct: 209 IRDDYCNLCLQEYSENKSYCEDLTEGKFSFPIIHAIH 245 >gi|294815586|ref|ZP_06774229.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|294328185|gb|EFG09828.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] Length = 442 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 42/228 (18%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR----------------------- 98 D+ V A A+E +H A ++HDD++D SA+R G A Sbjct: 142 DDIVRAAAAMELVHAAAVVHDDLIDHSAVRHGSPTAHRALVPPGRAVGDDAARSAAGRAL 201 Query: 99 --------LVWGNQ--TSVLVGDFLLSQA----FCMVIETKSQEALEALSLVACTLAEGE 144 + W Q T + L++A + E + E LE L L E Sbjct: 202 ALLAGDLLISWSGQLFTECGLPGAYLNRARPLWATLARELIAGECLEVLRTGPSVLDGPE 261 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 V + L +++ KTA L + +L+ G ++ +YG+ LG Sbjct: 262 ----GPDGRTPVGADSSLQIVRYKTAKYTVEHPLHIGALLGGAPPALLDTFTAYGVPLGE 317 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 AFQL DD+L GE + GK+ +D KPT+ + L QR + E+ Sbjct: 318 AFQLRDDLLGVFGEPDTTGKSNLDDITGAKPTVLLALMRQRASDAERQ 365 >gi|254392222|ref|ZP_05007408.1| geranylgeranyl pyrophosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|326443937|ref|ZP_08218671.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|197705895|gb|EDY51707.1| geranylgeranyl pyrophosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 439 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 42/228 (18%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR----------------------- 98 D+ V A A+E +H A ++HDD++D SA+R G A Sbjct: 139 DDIVRAAAAMELVHAAAVVHDDLIDHSAVRHGSPTAHRALVPPGRAVGDDAARSAAGRAL 198 Query: 99 --------LVWGNQ--TSVLVGDFLLSQA----FCMVIETKSQEALEALSLVACTLAEGE 144 + W Q T + L++A + E + E LE L L E Sbjct: 199 ALLAGDLLISWSGQLFTECGLPGAYLNRARPLWATLARELIAGECLEVLRTGPSVLDGPE 258 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 V + L +++ KTA L + +L+ G ++ +YG+ LG Sbjct: 259 ----GPDGRTPVGADSSLQIVRYKTAKYTVEHPLHIGALLGGAPPALLDTFTAYGVPLGE 314 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 AFQL DD+L GE + GK+ +D KPT+ + L QR + E+ Sbjct: 315 AFQLRDDLLGVFGEPDTTGKSNLDDITGAKPTVLLALMRQRASDAERQ 362 >gi|170117033|ref|XP_001889705.1| predicted protein [Laccaria bicolor S238N-H82] gi|164635285|gb|EDQ99594.1| predicted protein [Laccaria bicolor S238N-H82] Length = 325 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 97/224 (43%), Gaps = 11/224 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 ++ + GK +R L A L D +++ + +H A+L+ DD+ DDS LRRGK Sbjct: 31 FITSNPGKEIRGKLIEAFNTWLNVPTDTLLVITKVVNMLHAASLMVDDIEDDSQLRRGKP 90 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A+ + ++ L EL L + L+ Sbjct: 91 VAHKIYGIPQTINTANYVYFLAYQELFALRNNPTTSPPRKDLDALVTEELLSLHRGQGLE 150 Query: 156 V---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + +EE+Y+ ++ +KT L +++ + G N + + +G+ FQ Sbjct: 151 ILWRDSLQCPSEEEYISMVNNKTGGLLRMGVKI-MMACGTTNIGVDYVPLVNL-IGVFFQ 208 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD+++ + K ED GK + PV+ T + Sbjct: 209 IRDDLMNLQSTEYTSNKGFAEDLTEGKFSFPVVHGIHADTSNRQ 252 >gi|283458392|ref|YP_003363016.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18] gi|283134431|dbj|BAI65196.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18] Length = 410 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/331 (24%), Positives = 137/331 (41%), Gaps = 53/331 (16%) Query: 40 SGGKRLRPMLTL------ATALMLEYRGDNHVLLAC-AIEFIHTATLLHDDVVDDSALRR 92 +GGKRLR +L+ A + E R ++ A A+E T+ L+HDD++D S RR Sbjct: 81 TGGKRLRALLSYWGWRGAGGAPVTENRASWSIVKAGMAVELFQTSALIHDDIIDRSDTRR 140 Query: 93 GKVAAR----------------LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 G + +G +L GD L+ + V + + A+ Sbjct: 141 GAPSVHKRFEAAHEQNSWRGDAFNYGLTGGILAGDLTLAWS-AEVFASLGEGAI--YGAP 197 Query: 137 ACTLAEGELRQLSLSKNLDVTEE------------DYLHVIKSKTA-------------- 170 A T+ + ++ + LDV E L+VI+ K+A Sbjct: 198 ARTIFDRMRTEVLAGQYLDVYSEVLETEDAQAALQRALNVIRFKSAKYSCEHPFTIGGAL 257 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L + ALE + Q+ V +++G+ LG FQL DD L G+ GK G+D R Sbjct: 258 ALQATALENGTGAVSEQHPVLAGYRAFGLPLGEGFQLRDDELGVFGQPEVTGKPAGDDLR 317 Query: 231 NGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290 GK T+ V L +++ +++ D ++S E +++ +M + A E Sbjct: 318 EGKRTVLVALTSAALDEKDAALLHNSLGDSELSDEQVERIRELMVSSGAFAKHEQLIEQK 377 Query: 291 GQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320 Q ++L + D +L ++V L+R Sbjct: 378 SQAVFEALEAMNLDELAHAALTDIVGRALRR 408 >gi|307325750|ref|ZP_07604950.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306888538|gb|EFN19524.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 766 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 27/235 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V +L+ + G+ RP + A +L + + L E +H + L+ DD+ D+S RRG Sbjct: 446 VLHLLDNPGRSWRPYVAAAVLCLLGADPEPYRPLTAVTELLHVSALVIDDIQDNSPTRRG 505 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 + + ++G ++ G L F +I+ + +A + L L +LR + Sbjct: 506 RPSVHEIFGTAPAITAG-TLGYYTFDALIQ-RVPQADDGTMLRIYRLYLRDLRAAHAGQA 563 Query: 154 LDVT--------------EEDYLHVIKS----KTAVLFSAALEVSSLIAGVQNSVRQALK 195 LD+ L I++ KT +L + EVS+++ G + A+ Sbjct: 564 LDLAGHHTAFDQAVATGDARPLLDQIRAAHRLKTGMLVRSTAEVSAILGGADETQLDAIC 623 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNE-------MGKNIGEDFRNGKPTLPVILAFQ 243 +Y +GIA+Q+ DDV D G+ ++ ED NG+ T PV A + Sbjct: 624 AYFEAVGIAYQITDDVFDLYGQCTPDEHRQGITTRSPAEDLHNGEVTYPVAHAIR 678 >gi|317506600|ref|ZP_07964392.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974] gi|316255109|gb|EFV14387.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974] Length = 378 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 97/237 (40%), Gaps = 32/237 (13%) Query: 32 DVVKYL---IFSGGKRLRPMLTLATALMLEYRGDNHVLLA-----CAIEFIHTATLLHDD 83 DVV L + GKR+RP L + A+E + L HDD Sbjct: 56 DVVAELSTFVLGSGKRIRPAFAWLGWLGAGGDAAGASAVPVQRVCAALELLQAGLLAHDD 115 Query: 84 VVDDSALRRGKVA---------ARLVW-------GNQTSVLVG-------DFLLSQAFCM 120 ++D S LRRG+ + +R W G ++L G D L ++ Sbjct: 116 IIDQSDLRRGEPSLHRRFEAEHSRERWAGRSERHGEALAILAGELAFVWADDLAAEGLDA 175 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA-ALEV 179 V E A + + + G+ + D +EE VI+ KTA A LE+ Sbjct: 176 VTEADRPAFRRAWAAMRSEVIGGQCLDVLAQAGGDESEEAAARVIRWKTASYTVARPLEL 235 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++A ++ + +G ++G AFQL DD+L G+ GK G+D R GK T+ Sbjct: 236 GGVLARADEALLTFYRGFGEDVGAAFQLQDDLLGVFGDPAVTGKPAGDDVREGKRTV 292 >gi|255715471|ref|XP_002554017.1| KLTH0E12430p [Lachancea thermotolerans] gi|238935399|emb|CAR23580.1| KLTH0E12430p [Lachancea thermotolerans] Length = 326 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 11/220 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL S GK R L E +++ +E +HT++LL DD+ D S RRG Sbjct: 32 YLTSSPGKNFRAELIQIFNSFYELPDHRIAIISKLVETLHTSSLLIDDIEDSSEWRRGLK 91 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 AA LV+G ++ +++ A + E + +L+ + E E+ L + LD Sbjct: 92 AAHLVYGVPMTINTANYMYFYAMECLKELGNGCDDLSLNKLLIIFNE-EMMDLHRGQGLD 150 Query: 156 V---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + TE +YL+++ +KT LF + + + + + + + + LGI +Q Sbjct: 151 IYWRDCFMVPTEPEYLNMVMNKTGGLFRLTVRLMEVFSPSFSGAKSLVPLSNL-LGILYQ 209 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + DD ++ + K +D GK + P+I + G+ Sbjct: 210 IRDDFMNLQDAKMIENKGFADDVSEGKLSFPIIHGIKHGS 249 >gi|255017999|ref|ZP_05290125.1| hypothetical protein LmonF_10200 [Listeria monocytogenes FSL F2-515] Length = 205 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 4/103 (3%) Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY--GMN 200 GEL Q+ S ++VT +YL I KTA LF AL S G + + K Y G Sbjct: 29 GELDQMRTSYKMNVTVREYLTRISGKTAQLF--ALSCYSGATGSKATRMTVAKCYNIGHY 86 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 LG+AFQ++DDVLDY +GK + D + G +LP+I A + Sbjct: 87 LGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 129 >gi|322711435|gb|EFZ03008.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae ARSEF 23] Length = 327 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 5/205 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL S GK +R LT A L + ++ I+ +H A+LL DD+ D S LRRG Sbjct: 47 YLRESPGKDIRGGLTNAFNQFLCVPEEKVTVIKRIIDLLHNASLLIDDIQDSSKLRRGVP 106 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ + A + + + A + L G+ +L +L Sbjct: 107 VAHSIFGIAQTINSANLAYFMAQKELDQLTNPRAYAIFTEELVNLHRGQGMELHWRDSLH 166 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TE++Y+ +I++KT LF A+ L+ G ++S ++ LG FQ+ DD + Sbjct: 167 CPTEQEYMRMIQNKTGGLFRLAIR---LMQG-ESSSKRDFVPLVETLGALFQIRDDYQNL 222 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVI 239 + +V K ED GK + P+I Sbjct: 223 QSDVYSKNKGYCEDISEGKFSYPII 247 >gi|320034476|gb|EFW16420.1| geranylgeranyl diphosphate synthase [Coccidioides posadasii str. Silveira] Length = 404 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 14/215 (6%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH---------DDVV 85 +Y++ GK +R L A L+ ++ ++ + +HTA+LL DDV Sbjct: 98 EYMVHQPGKDIRRQLIAAFNRWLQVPEESLAVITKVVLMLHTASLLANSPVLICSVDDVE 157 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D S LRRG A ++G ++ +++ A + + ++ +A+ + L G+ Sbjct: 158 DSSVLRRGVPVAHNIFGTAQTINSANYIYFLALDEIQKLRNADAIGIFTTELLNLHRGQG 217 Query: 146 RQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L L TEEDYL ++ +KT LF A++ + ++ V +G+ Sbjct: 218 MDLFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIK----LMQAESEVSVDCIPLVNLMGLI 273 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 FQ+ DD L+ K + ED GK + P+I Sbjct: 274 FQICDDYLNLSNPTYSKNKGLCEDLTEGKFSFPII 308 >gi|303318701|ref|XP_003069350.1| geranylgeranyl pyrophosphate synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240109036|gb|EER27205.1| geranylgeranyl pyrophosphate synthetase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 404 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 14/215 (6%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH---------DDVV 85 +Y++ GK +R L A L+ ++ ++ + +HTA+LL DDV Sbjct: 98 EYMVHQPGKDIRRQLIAAFNRWLQVPEESLAVITKVVLMLHTASLLANSAVLICSVDDVE 157 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D S LRRG A ++G ++ +++ A + + ++ +A+ + L G+ Sbjct: 158 DSSVLRRGVPVAHNIFGTAQTINSANYIYFLALDEIQKLRNADAIGIFTTELLNLHRGQG 217 Query: 146 RQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L L TEEDYL ++ +KT LF A++ + ++ V +G+ Sbjct: 218 MDLFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIK----LMQAESEVSVDCIPLVNLMGLI 273 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 FQ+ DD L+ K + ED GK + P+I Sbjct: 274 FQICDDYLNLSNPTYSKNKGLCEDLTEGKFSFPII 308 >gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera] Length = 1187 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 24/199 (12%) Query: 28 EMIPDVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV 84 + I + ++Y + + GGKR P++ +A + + GD ACA+E +H A+L+HDD+ Sbjct: 332 QQIYEAMRYSVLAKGGKRAPPVMCVAVCEL--FGGDRLAAFPTACALEMVHAASLIHDDL 389 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALE---------- 131 +DD RRG+ + V+G ++L GD L F ++ T S E Sbjct: 390 PCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEI 449 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 A S+ + +A G+ L + N D+ V + K + + + G + Sbjct: 450 ARSVGSTGMAAGQFLDLEGAPN----SVDF--VQRKKFGEMAECSAVCGGFLGGAADDDI 503 Query: 192 QALKSYGMNLGIAFQLVDD 210 L+ YG +G+ +Q+VDD Sbjct: 504 LRLRRYGRAVGMLYQVVDD 522 >gi|320583988|gb|EFW98200.1| Geranylgeranyl diphosphate synthase [Pichia angusta DL-1] Length = 316 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 15/209 (7%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 + GK LR +L L+L + + I+ +H ++LL DD+ D+S LRR + + + Sbjct: 29 TQGKHLRSLLIKTFNLVLNVPAEKLEKIEAVIDTLHLSSLLIDDIEDNSKLRRSRPCSHM 88 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV--- 156 ++G ++ +++ A ++ + E LVA + E+ L + LD+ Sbjct: 89 IFGVPQTINCANYMYFVAMRLLTDAIENEDKR---LVAQNVFLDEMVNLHRGQGLDLHWR 145 Query: 157 ------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 +E++Y++++ +KT LF + ++ +L+A + L + LG+ +Q+ DD Sbjct: 146 ENNECPSEQEYVNMVMNKTGGLFRLSAKLMNLLA---DQPCDKLITLSNMLGVIYQIKDD 202 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 L+ V K ED GK + P+I Sbjct: 203 YLNLISNVYNKNKGYCEDITEGKFSFPII 231 >gi|329897187|ref|ZP_08271927.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium IMCC3088] gi|328921342|gb|EGG28736.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium IMCC3088] Length = 361 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 13/267 (4%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK LR L + A A A+E +H A+L+HDD+ D + RRG+ + Sbjct: 71 GKHLRGKLAYSAARQYGSSSQAASSWAAAVELLHNASLVHDDLCDKDSKRRGQQTTFRQY 130 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161 G +V +GD+L+++A+ ++ S ++ + G+ + + + +E Y Sbjct: 131 GEAVAVCLGDYLIAKAYEFAARAGAESLHLLSSSISALVG-GQAAEFASAGYPAWSE--Y 187 Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 + SKTA L + ++LI Q++ L+ Y + + FQ+++D+ ++ G ++ Sbjct: 188 EQIAVSKTAPLLGMGVVGAALI-NQQSAPEAELEHYFYHAALCFQMINDIRNFSG--SDG 244 Query: 222 GKNIGEDFRNGKPTLPVILAF----QRGTKREKNFWKSTINDGKISVENLKKAFIIMR-- 275 + D N +P VI +F + K + W I G+I + ++ R Sbjct: 245 AEAPCSDLANCRPNA-VIASFTETLPKHLKARFSLWADKIRTGEIIADTVETREWWQRLC 303 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLP 302 + A DT R + + A SL LP Sbjct: 304 ASDAFSDTAQRLHFHFNMASASLVRLP 330 >gi|321261676|ref|XP_003195557.1| farnesyltranstransferase [Cryptococcus gattii WM276] gi|317462031|gb|ADV23770.1| Farnesyltranstransferase, putative [Cryptococcus gattii WM276] Length = 322 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 21/225 (9%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ + GK +R L A L LE D+ V++ + +H A+LL DDV D+S LRRG Sbjct: 29 YISQNPGKEIRSKLIDAFNLWLEVDKDDLVVITKVVRMLHNASLLMDDVEDNSELRRGLP 88 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVACTLAEGELRQLSLS 151 A ++G ++ +++ AF +++ +S + + + LV EL QL Sbjct: 89 VAHTIYGVPQTINTANYVYFLAFQELLQLRSGVMGKGKDKEVDLVVA--VNEELLQLHRG 146 Query: 152 KNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL- 201 + +D+ TE++Y+ ++ K L A+++ ++A ++V +NL Sbjct: 147 QGMDLFWRDSLTCPTEKEYIDMVLGKAGGLLRLAVKL--MMAKSDSNVNYVPL---VNLI 201 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + FQ+ DD ++ + + K ED GK + PV+ + T Sbjct: 202 SVWFQIRDDYMNLQSPAYKSNKGFCEDLTEGKFSFPVVHGVRADT 246 >gi|315604555|ref|ZP_07879618.1| polyprenyl synthetase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313567|gb|EFU61621.1| polyprenyl synthetase [Actinomyces sp. oral taxon 180 str. F0310] Length = 367 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 73/251 (29%), Positives = 107/251 (42%), Gaps = 42/251 (16%) Query: 40 SGGKRLRPMLT-----LATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 SGGKR R ++ L L L H L+ A+E + L+HDD++D + RRG Sbjct: 47 SGGKRFRALMAHVGYCLGAGLALGEVFLPH--LSAALELYQASALVHDDIIDRANERRGA 104 Query: 95 VA---------ARLVW-------GNQTSVLVGDFLLSQAF-------CMVIETKSQEALE 131 R W G ++LVGDFL S A ++ E +Q Sbjct: 105 PTPHRLLADHHGRRRWMGSPTDFGEHAAILVGDFLFSAATDAADAQALLLDEAAAQSFTR 164 Query: 132 ALSLVACTLAEGEL-----RQLSLSKNLD--VTEEDYLHVIKSKTA---VLFSAALEV-- 179 + + +A G+ Q L + D V+ D L V K+A V+ AAL Sbjct: 165 RFADMHAEVALGQYLDIVAEQTPLDPHRDDAVSGADALDVALHKSAHYSVVHPAALGAIC 224 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +S G +++ L S G+AFQL DD L G+ GK G+D R GK T+ + Sbjct: 225 ASAPPGQVSTLLAILDSVLTPWGLAFQLRDDDLGVFGDPQVTGKPAGDDLREGKRTVLLA 284 Query: 240 LAFQRGTKREK 250 L ++ T E+ Sbjct: 285 LTWEASTPSER 295 >gi|160893232|ref|ZP_02074020.1| hypothetical protein CLOL250_00778 [Clostridium sp. L2-50] gi|156865315|gb|EDO58746.1| hypothetical protein CLOL250_00778 [Clostridium sp. L2-50] Length = 170 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 7/112 (6%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 + Y +GGKRLRP+L T + G AIE IHT +L+HDD+ +D+ Sbjct: 34 AMNYSFQAGGKRLRPLLMQETYRLFGGTGKVVEPFMAAIEMIHTYSLIHDDLPALDNDEY 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVA 137 RRG+ + +V+G ++L GD LL+ AF +E +Q A +++A Sbjct: 94 RRGRKTSHVVFGEAMAILAGDALLNYAFETACKAFELEPGNQTVARAFTILA 145 >gi|145222438|ref|YP_001133116.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK] gi|315442885|ref|YP_004075764.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] gi|145214924|gb|ABP44328.1| Polyprenyl synthetase [Mycobacterium gilvum PYR-GCK] gi|315261188|gb|ADT97929.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] Length = 371 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 33/268 (12%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-----GDNHVLLACAIEFIHTATLLH 81 V++ DV++ L+ + GK LR +T L + +R D + A ++EF+H L+ Sbjct: 54 VDVAEDVLRGLL-ADGKCLR-----STFLYVGWRCGADGTDAAIRAAASLEFLHAFALMQ 107 Query: 82 DDVVDDSALRRGKVAARLV---W-------------GNQTSVLVGDFLLSQAFCMVIETK 125 DDV+D+S +RRG+ A W G +VL+ D L A M+ E+ Sbjct: 108 DDVMDESPMRRGRPTAHRAFANWHHANGLSGSSTRFGESAAVLLADLCLVWAEQMLRESG 167 Query: 126 SQ-----EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEV 179 A + LA G+ L + + L V + K+ LE+ Sbjct: 168 VDAAALDRAWPRYDTMRTELAVGQFADLVNDTATFPSLDAVLDVARRKSGNYTVRRPLEI 227 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + +AG AL YG +G AFQ+ DD+L G GK G+D K T V Sbjct: 228 GATLAGCDERQLSALAGYGSAVGEAFQMRDDLLGVFGSPETTGKPAGDDLAARKATSVVA 287 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENL 267 ++Q ++ + + G ++ ++ Sbjct: 288 ASYQLANDTQRRRLGALMTGGHLTPADI 315 >gi|254464346|ref|ZP_05077757.1| polyprenyl synthetase [Rhodobacterales bacterium Y4I] gi|206685254|gb|EDZ45736.1| polyprenyl synthetase [Rhodobacterales bacterium Y4I] Length = 294 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 24/262 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y I +GGK LR L L +A + + + A AIE IH +L+HDD+ L Sbjct: 40 AMRYAI-TGGKMLRGFLVLESARLHGVPAEAAIEAALAIECIHAYSLVHDDLPCMDDDDL 98 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRG+ W +VL GD L S AF ++ + AL+L+ LA+ + + Sbjct: 99 RRGQPTVHRKWDEAMAVLAGDSLQSFAFELLADPSVGP--HALTLIR-GLAQSSGKDGMV 155 Query: 151 SKN-LDVTEEDYLHVIK---------SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 S LD+ E + KT L + +++AG + L+ Y Sbjct: 156 SGQMLDIAAETATEPLTLKEITRLQGRKTGCLIEWSATAGAVLAGADPA---PLRQYASA 212 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 LG+AFQ+ DD+LD G+ ++GK + +D GK T +L R + Sbjct: 213 LGLAFQIADDILDVEGDAAKVGKAVRKDADAGKATFVSLLGLAEAKARAQTLCDEACAAL 272 Query: 261 KI---SVENLKKA--FIIMREN 277 + + E LK+A F+I R++ Sbjct: 273 SLYGETAETLKEAARFVIARDS 294 >gi|119181731|ref|XP_001242054.1| hypothetical protein CIMG_05950 [Coccidioides immitis RS] Length = 404 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 14/215 (6%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH---------DDVV 85 +Y++ GK +R L A L+ ++ ++ + +HTA+LL DDV Sbjct: 98 EYMVHQPGKDIRRQLIAAFNRWLQVPEESLAVITKVVLMLHTASLLANSPVLMCSVDDVE 157 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D S LRRG A ++G ++ +++ A + + ++ +A+ + L G+ Sbjct: 158 DSSVLRRGVPVAHNIFGTAQTINSANYIYFLALDEIQKLRNADAIGIFTTELLNLHRGQG 217 Query: 146 RQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 L L TEEDYL ++ +KT LF A++ + ++ V +G+ Sbjct: 218 MDLFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIK----LMQAESEVSVDCIPLVNLMGLI 273 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 FQ+ DD L+ K + ED GK + P+I Sbjct: 274 FQICDDYLNLSNPTYSKNKGLCEDLTEGKFSFPII 308 >gi|296424384|ref|XP_002841728.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637976|emb|CAZ85919.1| unnamed protein product [Tuber melanosporum] Length = 343 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 9/211 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL+ GK +R A L+ + ++ + +H A+LL DDV D S LRRG Sbjct: 66 YLVSHPGKDIRQQSITAFNSWLQVPEVSLQIITKVVAMLHNASLLVDDVEDRSNLRRGFP 125 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ QA +++ + L + L G+ L L Sbjct: 126 VAHSIFGVAQTINSANYVYFQALQELLKLNNPLVLRIYTEELLNLHRGQGMDLFWRDTLT 185 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TE+DYL ++ +KT LF A++ L+ S + + + +G+ FQ++DD L+ Sbjct: 186 TPTEDDYLEMVSNKTGGLFRLAVK---LMQAESASDKDYVPLVNI-IGLLFQILDDYLNL 241 Query: 215 RGEVNEMGKNIG--EDFRNGKPTLPVILAFQ 243 + N+ KN G ED GK + P+I A + Sbjct: 242 QS--NQYTKNKGFCEDLTEGKFSFPIIHAIR 270 >gi|332670673|ref|YP_004453681.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484] gi|332339711|gb|AEE46294.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484] Length = 372 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 96/238 (40%), Gaps = 44/238 (18%) Query: 38 IFSGGKRLRPMLTLATALMLEYRGDNHVL----------LACAIEFIHTATLLHDDVVDD 87 + SGGKRLR A +R V + A+E A L HDDV+D+ Sbjct: 49 MLSGGKRLR-----AAFCWWSWRAHGGVPGTPEAGTVVRVGAALELFQAAALFHDDVMDE 103 Query: 88 SALRRGKVAARLVW----------------GNQTSVLVGDFLL-------SQAFCMVIET 124 S RRG +A + G ++L+GD L + A + Sbjct: 104 SDTRRGMPSAHRAFEAMHVERGLSGDVRQFGMSAAILLGDLALVASEQEFASALADAPTS 163 Query: 125 KSQEALEALSLVACTLAEGEL-----RQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALE 178 +++ + L+ + G+ + L + D E VI++K+A L Sbjct: 164 RARRSRAVYDLMRTEVTVGQYLDVLAQSLPWGDDPDADESRARAVIRAKSARYSVEHPLT 223 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + + +A + A + G+ LG AFQL DD+L G+ GK G+D R GK T+ Sbjct: 224 LGAALADADDESLAACRQVGLPLGEAFQLRDDLLGVFGDPGATGKPAGDDLREGKRTV 281 >gi|114049916|emb|CAK50933.1| putative geranylgeranyl diphosphate synthase [Streptomyces ambofaciens] gi|114050138|emb|CAK51171.1| putative geranylgeranyl diphosphate synthase [Streptomyces ambofaciens] Length = 357 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 26/279 (9%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDD 87 + + ++ + +GGKR+R +L + D +L A ++E L+HDD++DD Sbjct: 44 VANTLRAFLAAGGKRVRALLCVVGWHAAGGSEDRAAVLRVAASLELFVAFALIHDDIMDD 103 Query: 88 SALRRGKVA------ARLVWGNQTSVL-VGDFLLSQAFCMVIETKSQEALEALSL----- 135 SA+RRG+ A RL ++ L G LL ++ +QE L L Sbjct: 104 SAVRRGRPAVHRALCTRLGQSSRAERLGAGGALLVGNLALIW---AQELLHTADLPLRRR 160 Query: 136 -VACTLAEGELRQLSLSKNLDV--TEED-----YLHVIKSKTAV-LFSAALEVSSLIAGV 186 L + L ++ + LDV T D L + + KTA L++ + +AG Sbjct: 161 RTVHALYDAMLEEVMYGQYLDVMGTGPDDDIDAALRIARYKTATATVERPLQLGAAVAGA 220 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ + G+ LG AFQ+ DD+LD G + D R GK T+ + L + T Sbjct: 221 DDTTVNLCTALGLPLGEAFQIRDDLLDVFGSTDGACTPGLGDLREGKRTVLLALGLRAAT 280 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 ++ +S + + + I+ E A TE+ Sbjct: 281 PAQQRRLRSLVGRADLDEHGAAEVRAILEETGARRRTEH 319 >gi|116197531|ref|XP_001224577.1| hypothetical protein CHGG_06921 [Chaetomium globosum CBS 148.51] gi|88178200|gb|EAQ85668.1| hypothetical protein CHGG_06921 [Chaetomium globosum CBS 148.51] Length = 715 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 15/266 (5%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 ++ D + ++ME V + + +DV P +Y+ GK +R A + Sbjct: 398 VINDDSHQEMEVVQ--DVPSLGTDVLEAPS--RYIDSLPGKGIRHKAIDALNVWYRVPPQ 453 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +++ A+ +H A+L+ DD+ D S LRRGK AA LV+G ++ F F + Sbjct: 454 QAAIVSKAVHLLHGASLMLDDIEDSSRLRRGKPAAHLVFGTMQTINSAGF----RFLNAL 509 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSS 181 E + LE L L G+ L+ + NL TEE+YL ++ + + L+ S Sbjct: 510 EELTNSKLEELQ----DLYVGQSYDLAWTCNLSCPTEEEYLAMVDGSLFRMLARMLDAQS 565 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + V + + LG FQ+ DD ++ K ED GK +LP+I A Sbjct: 566 DSPTKPDVV--LITRFMTLLGRFFQIRDDYMNLTSADYTKQKGFCEDLDEGKYSLPIIHA 623 Query: 242 FQRGTKREKNFWKSTINDGKISVENL 267 R + + KS N ++NL Sbjct: 624 LSRCGNSKSSDIKSKANSHVAILQNL 649 >gi|67522270|ref|XP_659196.1| hypothetical protein AN1592.2 [Aspergillus nidulans FGSC A4] gi|40745143|gb|EAA64299.1| hypothetical protein AN1592.2 [Aspergillus nidulans FGSC A4] gi|259486923|tpe|CBF85177.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 397 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 10/185 (5%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A + H A+LL DD+ D S LRRG A V+G ++ +++ A + +S Sbjct: 144 IATTVGMAHNASLLIDDIQDSSKLRRGVPCAHEVFGIAQTINSANYVYFLAQNQLFRLRS 203 Query: 127 -QEALEALSLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 +A+ + L G+ +L N L + +DYL +I +KT LF + + Sbjct: 204 WPQAISVFNEEMVNLHRGQGMELFWRDNLLPPSMDDYLQMIANKTGGLFRMIVRL----- 258 Query: 185 GVQNSVRQALKSYGM--NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +Q S RQ + + LG+ FQ++DD + R E K ED GK + P+ A Sbjct: 259 -LQTSSRQVIDVEQLVDVLGLYFQILDDYKNIREEKMAAQKGFFEDLTEGKFSFPICHAI 317 Query: 243 QRGTK 247 G K Sbjct: 318 GEGAK 322 >gi|259417470|ref|ZP_05741389.1| geranyltranstransferase [Silicibacter sp. TrichCH4B] gi|259346376|gb|EEW58190.1| geranyltranstransferase [Silicibacter sp. TrichCH4B] Length = 287 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 23/254 (9%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGK LR L L +A + + + A AIE IH +L+HDD+ LRRG+ Sbjct: 40 GGKMLRGFLVLESARLHDVPETAALEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTLH 99 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN-LDVT 157 W T+VL GD L + AF ++ + + A+SL+ T+AE + +S LD+ Sbjct: 100 RKWDEATAVLAGDSLQTLAFELL--AREEVGPHAISLIR-TMAEAAGKDGMVSGQMLDIA 156 Query: 158 EE--------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 E + + +++ KT L + + +AG + L+ Y LG+AFQ+ Sbjct: 157 AETAEAPLTLEQITTLQARKTGCLIEWSACAGARLAGADPA---PLRHYAQALGLAFQIA 213 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK---STINDGKISVE 265 DD+LD G+ +GK + +D GK T +L + +R + + + + + Sbjct: 214 DDILDIEGDAATVGKAVRKDEDAGKATFVSLLGLEGAKRRAQELADQACAALAPYGAAGD 273 Query: 266 NLKKA--FIIMREN 277 LK A F+I R++ Sbjct: 274 TLKDAARFVISRDS 287 >gi|50355599|dbj|BAD29965.1| Phoma betae geranylgeranyl diphosphate synthase Length = 343 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 5/205 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK +R +L L+ ++ ++ + +HTA+LL DD+ D+S LRRGK Sbjct: 62 YIAAKPGKEVRTLLLACFDEWLQVPPESLEVIGQVVRMLHTASLLIDDIQDNSELRRGKP 121 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A+ ++G ++ +++ A + K+ + + L G+ L L Sbjct: 122 VAQNIFGTALTINSANYVYFLALEKLNSLKNPNITDIFTEELLRLHRGQAMDLYWRDTLT 181 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEE+Y ++ +KT LF + ++S+ L LG+ FQ+VDD + Sbjct: 182 CPTEEEYFEMVANKTGGLFRLMYR----MMKAESSMPIDLLPVVELLGVIFQVVDDYKNL 237 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVI 239 K GED GK + PVI Sbjct: 238 CSREYGKLKGFGEDLTEGKFSFPVI 262 >gi|297196800|ref|ZP_06914197.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083] gi|197711617|gb|EDY55651.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083] Length = 713 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 93/234 (39%), Gaps = 23/234 (9%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V+ L+ + G+ RP L+ + + + LA E +HTA+L+ DD+ D S LRRG Sbjct: 391 VRMLLDAPGRAWRPYTALSVLCLFGADPEPYRPLAALTELLHTASLIIDDIQDGSPLRRG 450 Query: 94 KVAARLVWGNQTSVLVGD---FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-LS 149 + V G ++ G F + + L L L G Q L Sbjct: 451 RATVHEVIGTPAAITAGTAAFFAFEPLLQRIPQHDPATMLRVYQLCLRALRAGHAGQALD 510 Query: 150 LSKNL-----DVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 LS + VT D ++ K+ V EV++++A + +A+ Y Sbjct: 511 LSSHQAAFDHAVTTGDNRQLLADIRTTHRLKSGVPVRCIAEVAAVLADADEAQIRAVGDY 570 Query: 198 GMNLGIAFQLVDDVLDYRG-------EVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +GI +Q+ DDV D G K ED NGK T PV A R Sbjct: 571 FETVGIVYQISDDVADLDGVSTAQDRRQGRTAKRPAEDLLNGKVTYPVAHAVAR 624 >gi|329941631|ref|ZP_08290896.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045] gi|329299348|gb|EGG43248.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045] Length = 337 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 28/232 (12%) Query: 62 DNHVLL--ACAIEFIHTATLLHDDVVDDSALRRG----KVAARLVWGNQT---------S 106 D+ LL A ++E +H A +HDD++DDS LR G VA R + + Sbjct: 56 DSEALLRAAASLELVHAAATVHDDLIDDSPLRHGLPTVHVALRSALTGRPRAGAVARDLA 115 Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL-RQLSLSKNLDVTE------- 158 +LVGD L++ A + + L A L G+L R+L + L++ Sbjct: 116 MLVGDHLMALAGRLFADC----GLPAAYLARARTLWGDLARELIAGECLEILHTGGRPDT 171 Query: 159 EDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + L VI+ KTA L + +L+AG +R +YG+ LG AFQL DD+L G+ Sbjct: 172 DTSLKVIRYKTAKYTVEQPLLLGALLAGAAPDLRAGFSAYGLPLGEAFQLRDDLLGLFGD 231 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 GK +D R +PT + A+Q + T+ + E+L + Sbjct: 232 PVHTGKAPLDDLRGRRPTALLARAWQAAPPDSREELAGTLGRPDLDEEDLAR 283 >gi|169846410|ref|XP_001829920.1| farnesyltranstransferase [Coprinopsis cinerea okayama7#130] gi|116508947|gb|EAU91842.1| farnesyltranstransferase [Coprinopsis cinerea okayama7#130] Length = 325 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/236 (24%), Positives = 108/236 (45%), Gaps = 18/236 (7%) Query: 19 ILKRICSDVEMIPD----VVKYLIFS---GGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 IL R+ + E P+ +++ F+ GK +R L A L L D ++A + Sbjct: 7 ILDRLSREPEWSPEFESAILEPFTFTTSNPGKEIRGKLIDAFNLWLNVPDDKLQVIAKIV 66 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----- 126 +H A+L+ DD+ DDS LRRG A ++G ++ +++ AF + ++ Sbjct: 67 NMLHAASLMVDDIEDDSQLRRGNPVAHKIYGIPQTINSANYVYFLAFQELFALRNGPTPP 126 Query: 127 -QEALEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 Q+ + ++ +L G+ ++ +L TEE Y+ ++ +KT L +++ + Sbjct: 127 RQDIDQMVTQELLSLHRGQGLEILWRDSLQCPTEEQYIDMVSNKTGGLLRLGIKLMMACS 186 Query: 185 GVQNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + V L S G+ FQ+ DD+++ + K ED GK + PV+ Sbjct: 187 TTNSDVDYTPLVSL---FGVYFQIRDDLMNLQSPEYTSNKGFAEDLTEGKFSFPVV 239 >gi|50289191|ref|XP_447025.1| hypothetical protein [Candida glabrata CBS 138] gi|49526334|emb|CAG59958.1| unnamed protein product [Candida glabrata] Length = 332 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 15/196 (7%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 L +E +H ++L+ DD+ D+S LRRG VA+ +++G S+ +++ A + + S Sbjct: 61 LTQIVEILHNSSLIIDDIEDNSQLRRGVVASHMLYGVPMSINTANYMYFVAMDL-LRNLS 119 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDV-----------TEEDYLHVIKSKTAVLFSA 175 +A+ + L+ + EL L + LD+ TEE Y +++ +KT LF Sbjct: 120 HDAVTSNDLMK--IFNEELLYLHRGQGLDIYWRDSLPKVVPTEEMYFNMVMNKTGGLFRL 177 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L++ ++ +++L G LGI +Q+ DD L+ K +D GK + Sbjct: 178 TLKIMERLSEYWQG-QKSLVPLGNLLGIIYQVRDDYLNLTDSSMIETKGFADDISEGKLS 236 Query: 236 LPVILAFQRGTKREKN 251 P+I + N Sbjct: 237 FPIIHGINYAKIHDPN 252 >gi|124358874|dbj|BAF45924.1| fusicoccadiene synthase [Phomopsis amygdali] gi|124358876|dbj|BAF45925.1| fusicoccadiene synthase [Phomopsis amygdali] Length = 719 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+ +H ++LL DD D+S LRRGK + ++G+ +V + + +A ++E + E+ Sbjct: 462 AVRVLHNSSLLLDDFQDNSPLRRGKPSTHNIFGSAQTVNTATYSIIKAIGQIMEFSAGES 521 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ + L +G+ L + N V +EE+Y +I KT LFS A S L+ N Sbjct: 522 VQEVMNSIMILFQGQAMDLFWTYNGHVPSEEEYYRMIDQKTGQLFSIA--TSLLLNAADN 579 Query: 189 S-----VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI--LA 241 ++ L LG FQ+ DD + K ED GK +L +I + Sbjct: 580 EIPRTKIQSCLHRLTRLLGRCFQIRDDYQNLVSADYTKQKGFCEDLDEGKWSLALIHMIH 639 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280 QR N + G +++E + I+ E ++L Sbjct: 640 KQRSHMALLNVLSTGRKHGGMTLEQKQFVLDIIEEEKSL 678 >gi|258514899|ref|YP_003191121.1| Geranylgeranyl pyrophosphate synthase-like protein [Desulfotomaculum acetoxidans DSM 771] gi|257778604|gb|ACV62498.1| Geranylgeranyl pyrophosphate synthase-like protein [Desulfotomaculum acetoxidans DSM 771] Length = 260 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 6/186 (3%) Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 +RP L + + M + + LA +FIH A +H DV + S + G+Q Sbjct: 46 IRPALVIFSGRMFGRLSEKTLALAAVCQFIHMAAQVHVDVNEQSTAQIPGQEHDPRDGSQ 105 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL-RQLSLSKNL--DVTEEDY 161 VLVGD+L + F + + L+ LS + C + EG L RQ ++ + V D Sbjct: 106 FPVLVGDYLYGKFFTTLCDYGIVNFLKPLSEIICQINEGGLLRQKEINSKVKSQVVARD- 164 Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 V++ +TA LF+ +++ A +S AL +G N G+A+ L+++ + + V+ + Sbjct: 165 --VVRRETAELFAGCCSLAAESAEAGSSECLALYKFGKNFGMAYGLLENGMPFDQVVHYL 222 Query: 222 GKNIGE 227 +GE Sbjct: 223 NLALGE 228 >gi|302496364|ref|XP_003010184.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Arthroderma benhamiae CBS 112371] gi|291173724|gb|EFE29544.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Arthroderma benhamiae CBS 112371] Length = 347 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 7/184 (3%) Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DDV D S LRRG A ++G ++ +++ QA + + KS EA+ L Sbjct: 86 DDVEDSSHLRRGAPVAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMNLH 145 Query: 142 EGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ L L TEEDYL ++ +KT LF A++ + ++SV Sbjct: 146 RGQGMDLYWRDTLTCPTEEDYLEMVGNKTGGLFRLAIK----LMQAESSVPIDCVPLVDL 201 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTIN 258 +G+ FQ+ DD L+ K + ED GK + PVI + + + + N K N Sbjct: 202 MGLMFQVCDDYLNLSNPTYSKNKGLCEDLTEGKFSFPVIHSIRAQPENRQLINILKQKTN 261 Query: 259 DGKI 262 D ++ Sbjct: 262 DNEV 265 >gi|39934591|ref|NP_946867.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009] gi|39648440|emb|CAE26961.1| geranylgeranyl pyrophosphate synthase [Rhodopseudomonas palustris CGA009] Length = 288 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDV--VDD 87 ++ +F G R+RP L + AL DN + A+E +H A+L+HDD+ D Sbjct: 30 AMRSAVFPRGARVRPRLCHSVALACGE--DNPGITEAAGAALELMHCASLIHDDLPCFDG 87 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------EALEALSLVACT 139 + LRRG+ + +G +VL GD ++ AF + + Q + + V Sbjct: 88 ADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQTIARAEGQADRLLKLTQIIGGAVGVPFG 147 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + G+ + TE + H +SKT LF AA + + AG S + + G Sbjct: 148 IVAGQAWECE-------TEINLAHYHRSKTGALFVAATAMGAASAG---SDPEPWRMVGE 197 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +G A+Q+ DD+ D +V E+GK +G+D + +P+ Sbjct: 198 KIGEAYQVADDLRDAAADVEEIGKPVGQDVAHDRPS 233 >gi|322792499|gb|EFZ16466.1| hypothetical protein SINV_00774 [Solenopsis invicta] Length = 309 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 42/277 (15%) Query: 40 SGGKRLRPMLTLATALML--EYRGDNHV----LLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK+ R ++ + +L E ++ +LA E + A L+ DD+ D S LRRG Sbjct: 11 PGGKQFRALILIHAYQLLANEQVTKENIRLARILAWCGELMQAAGLMIDDIQDKSVLRRG 70 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIE------TKSQEALEALSLVACTLAEGELRQ 147 + L SV+ L + +++ T LE + +G++ Sbjct: 71 QPCWYLNDNVGLSVITDALKLKNSVYYILQKYFKGKTCYVNLLETFHNIILKTLDGQILD 130 Query: 148 LSLSKNLD-------VTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNS--VRQALKSY 197 L LSKN T + Y ++++KT+ F + ++ +AG+++ +QA ++ Sbjct: 131 LQLSKNFSKKLNLNLFTMDQYKCIVRNKTSYYSFVCPVFLAMNLAGIKDPEKFKQA-ETI 189 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW---- 253 + +G FQ+ DD LD+ G+ +GK+ D + GK T +++A QR T ++ Sbjct: 190 LLEIGHLFQVQDDFLDFFGDSEAIGKD-STDIQQGKCTWFIVMALQRATPEQREILEQCY 248 Query: 254 -----------KSTIND---GKISVENLKKAFIIMRE 276 K ND K+ + ++AF ++RE Sbjct: 249 GFSDPEKVKCVKQLFNDLDLHKVCISYTEQAFNLLRE 285 >gi|293189826|ref|ZP_06608540.1| polyprenyl synthetase [Actinomyces odontolyticus F0309] gi|292821241|gb|EFF80186.1| polyprenyl synthetase [Actinomyces odontolyticus F0309] Length = 367 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 51/290 (17%) Query: 40 SGGKRLRPMLT-----LATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 SGGKR R ++ L++ +E H L+ A+E + L+HDD++D + RRG Sbjct: 47 SGGKRFRALMAHVGYALSSGTSIEEVSLPH--LSAALELYQASALVHDDIIDKADERRGM 104 Query: 95 ----------------VAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSL 135 + + +G ++LVGDFL S A E T ++ A S Sbjct: 105 PSPHRTLANYHTAQSWIGSSTDFGRHGAILVGDFLFSAATAAADEQALTLREDCARAFSR 164 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--------------- 180 + +++L + LD+T E + A+ S +LEV+ Sbjct: 165 RFADMHA----EVALGQYLDITAEQTPLDPERTDALSTSDSLEVALHKSAHYSVVHPALL 220 Query: 181 SLIAGVQNSVRQA-----LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 I G + R A L++ G+AFQL DD L G+ GK G+D R GK T Sbjct: 221 GAICGASSFDRVADLLDVLETLLTPWGLAFQLRDDDLGVFGDPAVTGKPAGDDLREGKRT 280 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF-IIMRENRALVDTE 284 + L ++ + E+ + + S E + A I+ R RA + E Sbjct: 281 ALLALTWEASSPAERRALTDVLGVAEASPEQIATATDIVERNGRAAHEAE 330 >gi|311900885|dbj|BAJ33293.1| putative polyprenyl diphosphate synthase [Kitasatospora setae KM-6054] Length = 351 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 19/212 (8%) Query: 41 GGKRLR-PMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGKRLR +L A AL+ A ++E +HT L+HDD++DD+ LRRG + Sbjct: 62 GGKRLRVALLHEAAALVTAGPVPGLDAAALSVELLHTHGLVHDDLIDDAPLRRGGPSTYY 121 Query: 100 VW----------GNQTSVLVGD---FLLSQAFCMVIETKSQEALEALSLVACTLAEGELR 146 + +VL GD FL + + AL ++VA A Sbjct: 122 AYLAEFPDRPDTARALTVLAGDLAAFLAVRVLLGPGGPPPERALAMAAVVADAGAAAVGG 181 Query: 147 Q-LSLSKNL-DVTEEDYLHVIKSKTAVLFS--AALEVSSLIAGVQNSVR-QALKSYGMNL 201 Q L L ++ + + +LH + + + +S A L + L AG + + L+ Y + Sbjct: 182 QLLDLERDFPPLPDTAFLHEVTAYKSTGYSVLAPLRLGLLAAGADPAPYDRELRGYAEAV 241 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 G+A Q+ DD+LD G+ + +GK +G D R G+ Sbjct: 242 GVANQIHDDLLDLFGDQDALGKPLGTDLRAGR 273 >gi|50309979|ref|XP_455003.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644138|emb|CAH00090.1| KLLA0E23299p [Kluyveromyces lactis] Length = 315 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 16/239 (6%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+ ++ +I + + + +YL+ GKR+R +L + E + ++ I Sbjct: 5 MDSLDQIIYNDTLQTTKPVTEPFEYLLKQQGKRVRTLLIEEFGKLYEVPKPSIDAVSAFI 64 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 + +HTA+LL DD+ D++ LRRG VAA +G T+ L+ A C V + S+ + Sbjct: 65 DELHTASLLIDDIEDNAELRRGHVAAHKKYGIWTT-------LNSAQCAVYVSISKLLAK 117 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEED---------YLHVIKSKTAVLFSAALEVSSL 182 ++ EL +L + + D+ D Y + K+KT LF + + Sbjct: 118 EHEPSLPSIINDELIRLHVGQGQDIYWRDDGIVPSVNEYYEMAKNKTGGLFRLMVRLLHA 177 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + + + L GI +Q+ DD L+ + K +D GK + P+I A Sbjct: 178 LSKKELAQKYDLIPLANAAGILYQIRDDYLNLFSKTMFEQKGFADDLTEGKFSFPIIHA 236 >gi|320006972|gb|ADW01822.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331] Length = 392 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 100/231 (43%), Gaps = 38/231 (16%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALR 91 V + GGKRLR L GD L A+E + L+HDDV+D+S +R Sbjct: 67 VAAFVLQGGKRLRTAFVRCGWLAAGGSGDPGTPLRVGAALELLQACALVHDDVMDESPVR 126 Query: 92 RGKVA-----ARL-----VWGNQTS------VLVGDFLLSQAFCMVIET----------- 124 RG A ARL + G+ TS VL GD L A ++ ET Sbjct: 127 RGAPAVHAQFARLHREGRMRGSATSYSATAAVLAGDLALVWADDLLTETALSSPYGGHLH 186 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA--ALEVSSL 182 + +A+ + L ++R + + D T+ + +KS L++ L + + Sbjct: 187 REWQAMRGEMVAGQYL---DMRAQATGSS-DETQARNIATLKS---ALYTVERPLALGAC 239 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 +AG V AL+S G G+AFQL DD+L G+ GK ED R K Sbjct: 240 LAGAGAPVMDALRSAGRCAGLAFQLHDDLLGAFGDPAVTGKPADEDLRTRK 290 >gi|317028384|ref|XP_001389988.2| farnesyltranstransferase [Aspergillus niger CBS 513.88] Length = 344 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 13/209 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL+ S GK +R A L + ++ + +HTA+LL DD+ D+S LRRG Sbjct: 66 YLLKSPGKDIRRKFIHAFNEWLRIPEEKLNIITEIVGLLHTASLLIDDIQDNSKLRRGLP 125 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ ++ A + E EA E + L G+ L +L Sbjct: 126 VAHSIFGIAQTINSANYAYFLAQERLRELNHPEAYEIYTEELLRLHRGQGMDLYWRDSLT 185 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN----LGIAFQLVDD 210 TEEDY+ +I +KT LF A+++ L KSY + LG+ FQ+ DD Sbjct: 186 CPTEEDYIEMIANKTGGLFRLAIKLMQL--------ETETKSYVIELADLLGVIFQIRDD 237 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + + K ED GK + +I Sbjct: 238 YQNLQSGLYTKNKGFCEDLTEGKFSFLII 266 >gi|255326216|ref|ZP_05367302.1| polyprenyl synthase [Rothia mucilaginosa ATCC 25296] gi|255296670|gb|EET76001.1| polyprenyl synthase [Rothia mucilaginosa ATCC 25296] Length = 410 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 83/352 (23%), Positives = 148/352 (42%), Gaps = 54/352 (15%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL------ATALMLEYRGDNHVLLAC-AI 71 +L+ I S+ + + ++ L +GGKRLR +L+ A + E R ++ A A+ Sbjct: 61 LLEGISSETLPLLEAIESLS-TGGKRLRALLSYWGWRGAGGAPVTENRTSWSIVKAGMAV 119 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAAR----------------LVWGNQTSVLVGDFLLS 115 E T+ L+HDD++D S RRG + +G +L GD ++ Sbjct: 120 ELFQTSALIHDDIIDRSDTRRGAPSVHKRFEAAHEQNSWRGDAFNYGLTGGILAGDLTMA 179 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE------------DYLH 163 + V + + A+ A T+ + ++ + LDV E L+ Sbjct: 180 WS-AEVFASLGEGAI--YGAPARTIFDRMRTEVLAGQYLDVYSEVLETEDAQAALQRALN 236 Query: 164 VIKSKTA--------------VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 VI+ K+A L +A LE + Q+ V +++G+ LG FQL D Sbjct: 237 VIRFKSAKYSCEHPFTIGGALALQAAVLESGASAVSEQHPVLAGYRAFGLPLGEGFQLRD 296 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D L G+ GK G+D R GK T+ V L +++ +++ D ++S E +++ Sbjct: 297 DELGVFGQPEVTGKPAGDDLREGKRTVLVALTSAVLDEKDAALLHNSLGDPELSDEQVER 356 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP-DSSWKKSLMEVVDFCLQR 320 +M + A E Q ++L + D +L ++V L+R Sbjct: 357 IRELMVSSGAFAKHEQLIEQKSQAVFEALEAMNLDELTHAALTDIVGRALRR 408 >gi|225872538|ref|YP_002753993.1| farnesyltranstransferase [Acidobacterium capsulatum ATCC 51196] gi|225793159|gb|ACO33249.1| farnesyltranstransferase [Acidobacterium capsulatum ATCC 51196] Length = 307 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 12/193 (6%) Query: 67 LACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 LA A+E+ HTA+LL DD+ +DD+ LRRG +G ++L L++ A+ ++ + Sbjct: 68 LAIAVEYFHTASLLFDDLPCMDDATLRRGAACIHHTYGEGAAILTALALVNHAYGLLWKG 127 Query: 125 KSQEALEALS---------LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 + + EA + L L G+ R L + + Y + KT L Sbjct: 128 VAHSSAEARTRTLEYVEHQLGLAGLLNGQSRDLHM-REASRQPRIYQQIAIGKTVSLIRM 186 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 AL V ++ G + L + G+++Q++DD+ D + GK D + +P Sbjct: 187 ALVVPAIAGGAGEYEQCLLDRLAIAWGLSYQILDDLKDVLHTAKDSGKTASRDEKLQRPN 246 Query: 236 LPVILAFQRGTKR 248 L + + + +R Sbjct: 247 LALTIGVEASLRR 259 >gi|145596949|ref|YP_001161246.1| polyprenyl synthetase [Salinispora tropica CNB-440] gi|145306286|gb|ABP56868.1| Polyprenyl synthetase [Salinispora tropica CNB-440] Length = 384 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 83/276 (30%), Positives = 113/276 (40%), Gaps = 52/276 (18%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG---- 61 D TL D L I S + + +GGKRLRP +RG Sbjct: 41 DDTLVDFLATEIDALAAIDSSAGGFATTARDSVLAGGKRLRPTFA-----YWGWRGVVGG 95 Query: 62 ----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV----------------W 101 + A+E +H L HDDV+D SA RRG+ A + + Sbjct: 96 AEPLPPVLPALAALELLHAFALTHDDVMDSSATRRGRPTAHVAVAAQHAAAGRRGDSGKF 155 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-------TLAEGELRQLSLSKNL 154 G +VLVGD L A ++ + A L + C T+A L L S Sbjct: 156 GENVAVLVGDLCLVWADRLLAQAVLPPA-RLLEVRHCYDQMRVETVAGQYLDVLGESDPT 214 Query: 155 DVTEEDYLHVIKSKTA-------VLFSAALEVSSLIAGV--QNSVRQALKSYGMNLGIAF 205 + + E L V + KTA +LF A L AGV + + A YG +G AF Sbjct: 215 NWSVERALQVARYKTASYTVRWPLLFGARL------AGVVADSPLIAAYDRYGQAIGEAF 268 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 QL DD+L G+ GK G+D R GKPT+ ++LA Sbjct: 269 QLCDDLLGVYGDPATTGKPAGDDLRTGKPTVLLMLA 304 >gi|154509178|ref|ZP_02044820.1| hypothetical protein ACTODO_01699 [Actinomyces odontolyticus ATCC 17982] gi|153798812|gb|EDN81232.1| hypothetical protein ACTODO_01699 [Actinomyces odontolyticus ATCC 17982] Length = 367 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 51/290 (17%) Query: 40 SGGKRLRPMLT-----LATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 SGGKR R ++ L++ +E H L+ A+E + L+HDD++D + RRG Sbjct: 47 SGGKRFRALMAHVGYALSSGTSVEEVSLPH--LSAALELYQASALVHDDIIDKADERRGM 104 Query: 95 ----------------VAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSL 135 + + +G ++LVGDFL S A E T ++ A S Sbjct: 105 PTPHRRLANYHTAQSWIGSSTDFGQHGAILVGDFLFSAATAAADEQALTLREDCARAFSR 164 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS--------------- 180 + +++L + LD+T E + A+ S +LEV+ Sbjct: 165 RFADMHA----EVALGQYLDITAEQTPLDPERTDALSTSDSLEVALHKSAHYSVVHPALL 220 Query: 181 SLIAGVQNSVRQA-----LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 I G + R A L++ G+AFQL DD L G+ GK G+D R GK T Sbjct: 221 GAICGASSFDRVADLLDVLETILTPWGLAFQLRDDDLGVFGDPAVTGKPAGDDLREGKRT 280 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF-IIMRENRALVDTE 284 + L ++ + E+ + + S E + A I+ R RA + E Sbjct: 281 ALLALTWEASSPAERRALTDVLGVAEASPEQIATATDIVERNGRAAHEAE 330 >gi|317030986|ref|XP_001392584.2| polyprenyl synthetase [Aspergillus niger CBS 513.88] Length = 515 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 8/243 (3%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 + D E+ N + + D ++ +YL + K R L A + + +++ Sbjct: 164 IADPERKNPALAAILQLDDTILWKPYEYLTSTPSKGFRNHLIDALQEWYKVPQASLAVIS 223 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +H A+L+ DD+ DDS LRRGK A ++G ++ F ++ A + ++ Sbjct: 224 GVASLLHEASLMLDDIQDDSPLRRGKPAVHTIFGVGQTINSARFHINNALRLCLQLSPSA 283 Query: 129 AL---EALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIA 184 +L ++S L G+ L +++ + TEEDY ++ K L + +S L+ Sbjct: 284 SLIFSASISDQIAQLFTGQAHDLQWARHKSIPTEEDYFRMVDGKNGALL---ILISRLMQ 340 Query: 185 GVQNSVRQALKSYGMNL-GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 R ++ MNL G + QL DD + + + +D GK + P+I A Q Sbjct: 341 NEATQNRTLDLTHFMNLIGRSHQLRDDYQNLASQDYTTQRGFCQDLDEGKFSFPLIRAIQ 400 Query: 244 RGT 246 T Sbjct: 401 SST 403 >gi|242052439|ref|XP_002455365.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor] gi|241927340|gb|EES00485.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor] Length = 364 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 117/236 (49%), Gaps = 27/236 (11%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVV 85 E++ + ++Y + +GGKRLRP L +A ++ V +ACA+E +HTA+L+H + Sbjct: 96 EVLRESMRYSVLAGGKRLRPALAIAACELVGGPAAAAVPVACAVEMMHTASLIHDDMPCM 155 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 DD LRRG+ + + +G T++L GD LL+ AF V + + A + L EL Sbjct: 156 DDDPLRRGRPSNHVAFGEPTALLSGDALLALAFEHVARASAGAGVPADRALRAVL---EL 212 Query: 146 ------------------RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 Q + S +L E Y+HV KTA L AA +++ G Sbjct: 213 GSAAGVGGIAAGQVADMASQGASSGSLAALE--YIHV--HKTARLVEAAAVSGAVVGGGG 268 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + ++ Y LG+ Q+VDDVLD ++GK G+D GK T P ++ + Sbjct: 269 DGEVERVRRYAHFLGLLLQVVDDVLDVTATSEQLGKTAGKDAAAGKATYPRLMGME 324 >gi|46137163|ref|XP_390273.1| GGPP_GIBFU Geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (GGPPSASE) (Geranylgeranyl diphosphate synthase) [Gibberella zeae PH-1] Length = 416 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 5/205 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+I GK R L A L+ + ++ + +H ++LL DDV D S LRRG Sbjct: 136 YVISHPGKDFRAQLIAAFNAWLDVPAPSLEVITRVVGMLHESSLLIDDVQDSSELRRGFP 195 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A + + + E + S L G+ L L Sbjct: 196 VAHNIFGVAQTINSANYIYFVALQELHKLGNPELITIFSDELVNLHRGQGMDLFWRDTLT 255 Query: 156 -VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEEDYL ++ +KT LF ++ L+A N + + +G+ FQ+ DD ++ Sbjct: 256 CPTEEDYLEMVGNKTGGLFRLGIK---LMAEEANGPTDCVPLVNL-IGLIFQIRDDYMNL 311 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVI 239 + K + ED GK + PVI Sbjct: 312 SSKEYSHNKGMCEDLTEGKFSFPVI 336 >gi|76363949|gb|ABA41594.1| geranylgeranyl pyrophosphate synthetase-like protein [Solanum lycopersicum] Length = 206 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 2/76 (2%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VD 86 MI + ++Y + +GGKR+RPML +A ++ + ACA+E IHT +L+HDD+ +D Sbjct: 95 MIHESMRYSLLAGGKRIRPMLCIAACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMD 154 Query: 87 DSALRRGKVAARLVWG 102 + LRRGK ++G Sbjct: 155 NDDLRRGKPTNHKIYG 170 >gi|312376381|gb|EFR23484.1| hypothetical protein AND_12794 [Anopheles darlingi] Length = 299 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 5/203 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK++R L LA L + + ++ +H ++LL DD+ D+S LRRG A ++ Sbjct: 36 GKQIRSKLALAINHWLAIPVEKLAPIGEIVQMLHNSSLLIDDIEDNSILRRGIPVAHKIY 95 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-TEED 160 G +++ +++L A V + +A + + L G+ ++ N TE + Sbjct: 96 GVASTINAANYVLFLALEKVQQLGHPDATKVYTEQLLELHRGQGMEIYWRDNFACPTESE 155 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 Y + KT LF A+ + L + ++ LG+ FQ+ DD + + Sbjct: 156 YKQMTIRKTGGLFMLAIRLMQLFS----DNKKDFSKLAAILGLYFQIRDDYCNLSMKEYS 211 Query: 221 MGKNIGEDFRNGKPTLPVILAFQ 243 K+ ED GK + P+I A Q Sbjct: 212 ENKSYCEDLTEGKFSFPIIHAVQ 234 >gi|310789778|gb|EFQ25311.1| polyprenyl synthetase [Glomerella graminicola M1.001] Length = 742 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 12/264 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ KYL K +R + A L+ D + + ++H ++L+ DD+ D Sbjct: 444 ELVLAPYKYLTSMPSKGIRELFIRALNWWLKVPDDKLACIQDVVSYLHQSSLMLDDIEDG 503 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLVACTLAEGEL 145 S LRRG+ + V+G ++ +F+ QAF + + EA++ L +G+ Sbjct: 504 SKLRRGQPSTHAVYGIGQTINSANFVFVQAFARMQSLGHGRAEAIDIFIDEVENLHKGQS 563 Query: 146 RQLSLSKNLDVTEED-YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-LGI 203 L + D Y +I +KT LF + + A S R + + L Sbjct: 564 YDLFWKDQVHCPSVDEYFMMIDNKTGGLFRLCVRLMEFFA--TGSTRGISSEFFVKRLSR 621 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE--KNFWKSTINDGK 261 FQ+ DD + + K ED GK +LP+I Q R+ +K + G+ Sbjct: 622 YFQIRDDYQNLMSDQYAKEKGFAEDLDEGKISLPLIYTLQSSPYRDAISRVFKRRDDGGE 681 Query: 262 ISVENLKKAFII--MRENRALVDT 283 + +E K FII MR AL T Sbjct: 682 MGLE--MKVFIIREMRNTGALDKT 703 >gi|24660002|ref|NP_523958.2| quemao, isoform A [Drosophila melanogaster] gi|281365769|ref|NP_001163370.1| quemao, isoform B [Drosophila melanogaster] gi|7295252|gb|AAF50574.1| quemao, isoform A [Drosophila melanogaster] gi|17946375|gb|AAL49221.1| RE65121p [Drosophila melanogaster] gi|272455081|gb|ACZ94641.1| quemao, isoform B [Drosophila melanogaster] Length = 338 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 6/224 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ Y+ GK+ R L LA L G+ + ++ +H ++LL DD+ D+ Sbjct: 22 EILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQMLHNSSLLIDDIEDN 81 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ L A V + EA + + L G+ + Sbjct: 82 SILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEATKVYTEQLLELHRGQGME 141 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + +E DY + KT LF A+ + L + S ++ LG+ FQ Sbjct: 142 IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS----SNKEDYSKLTAILGLYFQ 197 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD + + K+ ED GK PVI A R K++K Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV-RTQKQDK 240 >gi|71020751|ref|XP_760606.1| hypothetical protein UM04459.1 [Ustilago maydis 521] gi|46100494|gb|EAK85727.1| hypothetical protein UM04459.1 [Ustilago maydis 521] Length = 396 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 41/260 (15%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL + GK +R L A + L+ + + +HTA+LL DDV D+S LRRG Sbjct: 53 YLDSNPGKEVRTKLIEAFNVWLQVPTRKLDAICNVVRMLHTASLLMDDVEDNSDLRRGIP 112 Query: 96 AARLVWGNQTSVLVGDF----LLSQAFCMVIETKSQEA----LEALSLVACT-------- 139 A ++G ++ ++ + S+ F M ++ S A L S +A Sbjct: 113 VAHKIYGIPQTINTANYVYFLVFSEIFRMNEDSTSASAESPPLSPHSTLAVNGVPRATVE 172 Query: 140 -LAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L EL L + +D+ TEE+Y+ ++ +KT LF A++ + S Sbjct: 173 RLVVDELINLHRGQGMDLLWRDSLICPTEEEYVEMVNNKTGGLFRIAVK-------LMLS 225 Query: 190 VRQALKSYGMN--------LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 A +S G +G+ FQ++DD ++ + K ED GK + P+I + Sbjct: 226 QSPAARSVGFPELIPMVNLIGLLFQILDDFMNLQSSKYAENKGFAEDLTEGKFSFPIIHS 285 Query: 242 FQRGTKREKNFWKSTINDGK 261 + E ST + K Sbjct: 286 IRASVAYETRSIASTASSTK 305 >gi|195338147|ref|XP_002035687.1| GM14833 [Drosophila sechellia] gi|195588444|ref|XP_002083968.1| GD14008 [Drosophila simulans] gi|194128780|gb|EDW50823.1| GM14833 [Drosophila sechellia] gi|194195977|gb|EDX09553.1| GD14008 [Drosophila simulans] Length = 338 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 6/224 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ Y+ GK+ R L LA L G+ + ++ +H ++LL DD+ D+ Sbjct: 22 EILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQMLHNSSLLIDDIEDN 81 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ L A V + EA + + L G+ + Sbjct: 82 SILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEATKVYTEQLLELHRGQGME 141 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + +E DY + KT LF A+ + L + S ++ LG+ FQ Sbjct: 142 IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS----SNKEDYSKLTAILGLYFQ 197 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD + + K+ ED GK PVI A R K++K Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV-RTQKQDK 240 >gi|317038629|ref|XP_001401830.2| hypothetical protein ANI_1_1856184 [Aspergillus niger CBS 513.88] Length = 693 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 14/265 (5%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + YL K +R + A L L + I +H ++LL DD+ D+S LRRG Sbjct: 391 INYLRSVPSKNIRGTIIQALNLWLNAPESVATQVEDLIGHLHDSSLLLDDIQDNSELRRG 450 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE-GELRQLSLSK 152 + A V+G ++ L+QAF S + A ++ C L E ELR L + + Sbjct: 451 RPTAYRVFGVAQTINAATHALTQAFEKAPHMGSSVSSPARMVMVCLLIEVDELRNLHVGQ 510 Query: 153 NLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ-NSVRQA-LKSYGMNL 201 +D+ + DYL + + KT LF A + + +++Q L ++L Sbjct: 511 AMDLHWTRSGYRPSIADYLEMNRLKTGALFCLASNLLYIQGSFSAEAIKQTDLSDLMISL 570 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE--KNFWKSTIND 259 G FQ DD ++ + K +D GK +LP+I + +N + Sbjct: 571 GQYFQARDDYINLASTKYQEQKGFAQDLDEGKLSLPLIHLLTQSPNAALIENIQQERARH 630 Query: 260 GKISVENLKKAFIIMRENRALVDTE 284 GK+S + + MR + L TE Sbjct: 631 GKLSADLKQLILDEMRNEKILQLTE 655 >gi|255943955|ref|XP_002562745.1| Pc20g01860 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587480|emb|CAP85515.1| Pc20g01860 [Penicillium chrysogenum Wisconsin 54-1255] Length = 372 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 5/207 (2%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++YL+ GK +R L A L D ++ I+ +HTA+LL DD+ D S LRRG Sbjct: 82 LEYLLCIPGKDIRGKLISAFNEWLHLPDDKLAIVKEVIDRLHTASLLIDDIQDASRLRRG 141 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 A V+G ++ ++ + E A + L G+ L Sbjct: 142 HPVAHDVFGVAQTINAANYAYFLQQKRLNEINDPRAFHIFTQALLDLHIGQGMDLYWRDA 201 Query: 154 LDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 L TE +Y ++ KT LF A+E+ +Q++ L LGI FQ+ DD + Sbjct: 202 LVCPTEAEYTRMVMYKTGGLFRLAVELMQ----IQSTTTTDLSRLVGLLGIIFQIRDDYM 257 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + + K + ED GK + PVI Sbjct: 258 NLQSGIYAEKKGLMEDLTEGKFSYPVI 284 >gi|2944400|gb|AAC05273.1| geranylgeranyl pyrophosphate synthase [Drosophila melanogaster] Length = 338 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 6/224 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ Y+ GK+ R L LA L G+ + ++ +H ++LL DD+ D+ Sbjct: 22 EILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQMLHNSSLLIDDIEDN 81 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ L A V + EA + + L G+ + Sbjct: 82 SILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEATKVYTEQLLELHRGQGME 141 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + +E DY + KT LF A+ + L + S ++ LG+ FQ Sbjct: 142 IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS----SNKEDYSKLTAILGLYFQ 197 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD + + K+ ED GK PVI A R K++K Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV-RTQKQDK 240 >gi|84685990|ref|ZP_01013886.1| geranylgeranyl pyrophosphate synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84666083|gb|EAQ12557.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium HTCC2654] Length = 286 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 16/220 (7%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGK LR L + A + + D A AIE +H ++L+HDD+ LRRG+ Sbjct: 37 GGKGLRGFLVIEGASLFDVSPDRSSYAAAAIEAVHASSLVHDDLPCMDDDDLRRGRPTVH 96 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELR-QLSLSKNLDVT 157 + W T VLVG L AF +V + + + +A TL G + + ++LD+ Sbjct: 97 VKWDEATGVLVGVALQFLAFELVGDPAVGSG-DIRAELARTLGHGAGGFGMVMGQSLDLA 155 Query: 158 EE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 E + + + KT LF + +++ + R+ L+ YG LG AFQ+ Sbjct: 156 AEVAPNPLTLDEIIALQAGKTGALFEWSAFAGAILG---EADREPLRQYGAALGQAFQIA 212 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 DD+LD G+ +GK + +D GK T +L KR Sbjct: 213 DDILDIEGDAETVGKAVQKDKDAGKATFVSLLGMDGARKR 252 >gi|119494797|ref|XP_001264204.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] gi|119412366|gb|EAW22307.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] Length = 397 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 10/185 (5%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A + H A+LL DD+ D S LRRG A V+G ++ +++ A + ++ Sbjct: 144 IAATVGMAHNASLLIDDIQDSSKLRRGVPCAHEVYGVAQTINSANYVYFLAQDQLFRLRN 203 Query: 127 -QEALEALSLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 +A+ + L G+ +L N L + +DYL +I +KT LF A+ + Sbjct: 204 WPQAISVFNEEMVNLHRGQGMELFWRDNLLPPSMDDYLQMIANKTGGLFRMAVRL----- 258 Query: 185 GVQNSVRQALKSYGM--NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +Q S R + + LG+ FQ++DD + + E K ED GK + P+ A Sbjct: 259 -LQTSSRHVVDVEQLVDVLGLYFQILDDYKNVKEEKMAAQKGFFEDLTEGKFSFPICHAI 317 Query: 243 QRGTK 247 + G K Sbjct: 318 REGNK 322 >gi|313237864|emb|CBY12994.1| unnamed protein product [Oikopleura dioica] Length = 349 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 40/260 (15%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHV------LLACAIEFIHTATLLHDDVVDDSALRR 92 SGGK R M+ A+ + L D+ V +L A+E + T L+ DD++D S RR Sbjct: 55 LSGGKMSRGMV--ASQVFLLSAKDSRVSEEDALVLGWAMECLQTCFLVVDDIMDSSVTRR 112 Query: 93 GKVAARLVW-GNQTSVLVG-DFLLSQAFCMVIETKS----------QEALEALSLVA--- 137 G R W NQ L+ + LS C+ I +S E E +++ Sbjct: 113 G----RACWYKNQDVGLMAINDALSIEMCVYILLRSLPDYVPVDKLVELFEWATIITEMG 168 Query: 138 --CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS-LIAGVQNSVRQAL 194 + E + LS TE+ Y ++K KT+V +S L ++S L+A Q+S L Sbjct: 169 QTLDMQNSECAHVDLSH---FTEDTYSAIVKYKTSV-YSFYLPIASGLVAAGQDSNCSQL 224 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 K + +G FQ DD +D G GK IG D ++ K + V+ A + +++++ K Sbjct: 225 KEITLQMGHYFQAQDDFIDCFGNPEVTGK-IGTDIQDNKCSWLVVEALKYASQKQRQLIK 283 Query: 255 STINDGK---ISVENLKKAF 271 N GK I VE +K+ + Sbjct: 284 D--NYGKKNEICVERIKELY 301 >gi|115400049|ref|XP_001215613.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191279|gb|EAU32979.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 653 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 5/169 (2%) Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 +TL+ DD+ DDS LRRGK A LV+G +V +L ++A + + K E+ A Sbjct: 408 STLMIDDIEDDSTLRRGKPTAYLVFGKAQTVNSATYLYARATRELEQLKHPESKTAFLDE 467 Query: 137 ACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 TLA G+ L K T E YL ++ +KT F AL + L +G L Sbjct: 468 LETLALGQALDLYWKFHKTCPTTSE-YLTMVDNKTGGFFRMALRIMELESGATPC--PDL 524 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G +Q+ DD L+ + K ED GK + P++ A Q Sbjct: 525 THLVTLMGRYYQIRDDYLNLTSDEYTGTKGFCEDLSEGKFSFPLLHALQ 573 >gi|328863633|gb|EGG12732.1| hypothetical protein MELLADRAFT_32660 [Melampsora larici-populina 98AG31] Length = 346 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 11/222 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E+I + YL + K L M+T A + ++ + H A+LL DD+ DD Sbjct: 45 EIILEPYTYLGINTDKELPAMVTKAFNHWYQVPRPALDIILKIVGPTHAASLLIDDIQDD 104 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLV---ACTL 140 S LR+GK A V+G ++ +++ A+ + + KS E + S++ L Sbjct: 105 SDLRKGKPVAHTVYGVAQTINTATYVVFDAYRNISKLTLFLKSPETTDLGSIIDDEIVAL 164 Query: 141 AEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 G+ + L +L TEE+YL +I +KT +F +++ ++ V+ S+ + Sbjct: 165 HRGQGKDLYWRDSLICPTEEEYLRMIHNKTGAMFRLPIKLLQALSPVE-SLPDCFSLVNI 223 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +GI Q+ +D+L + E K EDF GK + P+I A Sbjct: 224 -IGILAQIQNDLLSLSRDFTE-DKGFCEDFSEGKFSFPIIHA 263 >gi|297170553|gb|ADI21581.1| geranylgeranyl pyrophosphate synthase [uncultured verrucomicrobium HF0070_35E03] Length = 180 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 46/76 (60%) Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 DYL +I+ KT LF AA EV + +AG ++G +LGI +Q+ DD++D G Sbjct: 5 DYLSIIQGKTGELFRAACEVGTHLAGFSKETTIQAGNFGSSLGIIYQIYDDLVDSFGNPG 64 Query: 220 EMGKNIGEDFRNGKPT 235 ++ K++G DF +GK T Sbjct: 65 DINKSLGSDFESGKVT 80 >gi|313222092|emb|CBY39100.1| unnamed protein product [Oikopleura dioica] Length = 349 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 34/257 (13%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHV------LLACAIEFIHTATLLHDDVVDDSALRR 92 SGGK R M+ A+ + L D+ V +L A+E + T L+ DD++D S RR Sbjct: 55 LSGGKMSRGMV--ASQVFLLSAKDSRVSEEDALVLGWAMECLQTCFLVVDDIMDSSVTRR 112 Query: 93 GKVAARLVW-GNQTSVLVG-DFLLSQAFCMVIETKS-------QEALEALSLVACTLAEG 143 G R W NQ L+ + LS C+ I +S + +E G Sbjct: 113 G----RACWYKNQDVGLMAINDALSIEMCVYILLRSLPDYVPVDKLVELFEWATIITEMG 168 Query: 144 ELRQLSLSKNLDV-----TEEDYLHVIKSKTAVLFSAALEVSS-LIAGVQNSVRQALKSY 197 + + S+ V TE+ Y ++K KT+V +S L ++S L+A Q+S LK Sbjct: 169 QTLDMQNSECAHVDLNHFTEDTYSAIVKYKTSV-YSFYLPIASGLVAAGQDSNCSQLKEI 227 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 + +G FQ DD +D G GK IG D ++ K + V+ A + +++++ K Sbjct: 228 TLQMGHYFQAQDDFIDCFGNPEVTGK-IGTDIQDNKCSWLVVEALKYASQKQRQLIKD-- 284 Query: 258 NDGK---ISVENLKKAF 271 N GK I VE +K+ + Sbjct: 285 NYGKKNEICVERIKELY 301 >gi|329767036|ref|ZP_08258564.1| hypothetical protein HMPREF0428_00261 [Gemella haemolysans M341] gi|328837761|gb|EGF87386.1| hypothetical protein HMPREF0428_00261 [Gemella haemolysans M341] Length = 170 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 6/108 (5%) Query: 30 IPDVVK----YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV- 84 +PD++K Y + + GK++RP+ L E N+ +A AIE +HT +L+HDD+ Sbjct: 28 MPDILKESITYSLVNDGKKIRPLSFLYLLKYYEVDYTNYFDIALAIELVHTYSLVHDDLP 87 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 +D+ R GK+ V+G +VL GD +L+ AF ++ E+ + L+ Sbjct: 88 EMDNDDYRWGKLTNHKVFGQDLAVLTGDAMLTLAFEVLSESNVKSDLK 135 >gi|302661975|ref|XP_003022648.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Trichophyton verrucosum HKI 0517] gi|291186605|gb|EFE42030.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Trichophyton verrucosum HKI 0517] Length = 388 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 7/184 (3%) Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DDV D S LRRG A ++G ++ +++ QA + + KS EA+ L Sbjct: 127 DDVEDSSHLRRGAPVAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMNLH 186 Query: 142 EGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ L L TEEDYL ++ +KT LF A++ + ++SV Sbjct: 187 RGQGMDLYWRDTLTCPTEEDYLEMVGNKTGGLFRLAIK----LMQAESSVPIDCVPLVDL 242 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--NFWKSTIN 258 +G+ FQ+ DD L+ K + ED GK + PVI + + + + N K N Sbjct: 243 MGLMFQVCDDYLNLSNPTYSKNKGLCEDLTEGKFSFPVIHSIRAQPENRQLINILKQKTN 302 Query: 259 DGKI 262 D ++ Sbjct: 303 DNEV 306 >gi|171691761|ref|XP_001910805.1| hypothetical protein [Podospora anserina S mat+] gi|170945829|emb|CAP72629.1| unnamed protein product [Podospora anserina S mat+] Length = 467 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 7/226 (3%) Query: 17 FLILKRICSDVE--MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 FL KR+ ++ + ++ YL GK R L A LE ++ + + + Sbjct: 166 FLNTKRLWTEQKDKVLTAPYDYLNGHPGKDFRSALVNAFDAFLEVPKESKETITKVVSML 225 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTA+LL DDV D+S LRRG A ++G ++ +++ A + + K+ + + + Sbjct: 226 HTASLLVDDVEDNSLLRRGLPVAHTIYGIPQTINSSNYIYFVALQELQKLKNPKVVNIFA 285 Query: 135 LVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 L G+ L L TE++YL ++ +KT LF ++ L+ S+ Sbjct: 286 EELLNLHRGQGMDLYWRDTLTCPTEDEYLEMVGNKTGGLFRLGIK---LMQAESRSLTDC 342 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + +G+ FQ+ DD + + K + ED GK + PVI Sbjct: 343 IPLVNV-IGLIFQIADDYQNLWSKEYTANKGMCEDLTEGKFSFPVI 387 >gi|89052673|ref|YP_508124.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1] gi|88862222|gb|ABD53099.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1] Length = 290 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 10/208 (4%) Query: 33 VVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDVV--DDSA 89 ++Y + GG R+RP + L+ AL + + A AIE IH A+L+HDD+ DD+ Sbjct: 30 ALEYSVTPGGARIRPTICLSVALACGDPQPAMADAAATAIELIHCASLVHDDMPCFDDAD 89 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 +RRGK + + ++L GD L+ +F ++ + L A+ L+ L + Sbjct: 90 VRRGKPSVHKAYSEPLALLAGDSLIIASFEVLTRVAHHDPLRAIELMK-ILGQSTGMPGG 148 Query: 150 LSKNLDVTEEDYLHVI---KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + ED + + ++KT LF+AA + + + G +G AFQ Sbjct: 149 ICAGQGWESEDKIDLSAYHRAKTGALFTAATRMGAA---AAGEDPEPWTELGARIGEAFQ 205 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + DD+ D + +GK +D + +P Sbjct: 206 VADDLRDALYDEATLGKPAHQDEIHDRP 233 >gi|6899844|dbj|BAA90525.1| geranylgeranyl diphosphate synthase [Nigrospora sphaerica] Length = 392 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 11/208 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ S GK +R ++ LE ++ A+ +HTA+LL DD+ D+S LRRG+ Sbjct: 111 YIAASPGKEIRSLMLACFNAWLEVPAQRLEVIKRAVGMLHTASLLIDDIQDNSELRRGRP 170 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ + + A + ++ ++ + L G+ L + L Sbjct: 171 VAHKIFGPAMTINSANHMYFLALQELNALETPGVVDIFTDELLRLHRGQAMDLYWRETLT 230 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TE DY + +KT LF A + +++V L LG+ FQ+ D DY Sbjct: 231 CPTEADYFEMTSNKTGGLFRLAYRLMK----AESAVSVDLMPVVELLGVLFQVAD---DY 283 Query: 215 RGEVN-EMG--KNIGEDFRNGKPTLPVI 239 + + E G K +GED GK + P+I Sbjct: 284 KNLCSREYGDLKGVGEDLTEGKFSFPII 311 >gi|157111697|ref|XP_001651688.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti] gi|108878318|gb|EAT42543.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti] Length = 289 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 5/209 (2%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK+ R + +A L D V + I+ +H +LL DD+ D S LRRG AA ++ Sbjct: 14 GKQFRSRMAVALDHWLNVPFDKMVKVGEIIQLLHNGSLLIDDIQDSSVLRRGVPAAHQLF 73 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN-LDVTEED 160 G Q ++ ++++ A E A E L G+ + N + TE + Sbjct: 74 GVQFTMNTACYVITHALIQTNEVGGAAANEIFCHELLELHRGQGADIFWRDNSICPTEHE 133 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 Y ++ KT LF + + L + + R K G+ +G+ FQ+ DD + + Sbjct: 134 YKLMVVRKTGGLFLMLIRLLQLFS---ENKRDFSKLAGL-MGLFFQIRDDYCSLKSKDYT 189 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 K ED GK + PV+ + RE Sbjct: 190 TNKTFCEDLSEGKMSFPVVHSIMVMKDRE 218 >gi|242017538|ref|XP_002429245.1| geranylgeranyl pyrophosphate synthase, putative [Pediculus humanus corporis] gi|212514134|gb|EEB16507.1| geranylgeranyl pyrophosphate synthase, putative [Pediculus humanus corporis] Length = 313 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 22/244 (9%) Query: 12 MEKVNFLILKRICSDV-----------EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ME++N IC+D+ E + KY++ GK +R L A L+ Sbjct: 1 MEEIN------ICNDIPYSKNGDRDQDEKLLQPFKYILQVPGKHMREKLAKAFNYWLKIP 54 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D ++ ++ +H ++LL DD+ D+S LRRG A ++G +++ ++++ A Sbjct: 55 SDKLNVIVEIVQILHNSSLLLDDIQDNSVLRRGIPVAHSIYGIPSTINAANYVIFIALEK 114 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEV 179 + A + + L G+ ++ N L +E +Y + KT LF A+ + Sbjct: 115 TLSLDHPNATQVYTEQLLELHRGQGMEIYWRDNFLCPSESEYKQMTMKKTGGLFMLAVRL 174 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 L + ++ K G+ +G+ FQ+ DD + + K+ ED GK + P++ Sbjct: 175 MQLFSDNKSDFS---KIAGI-IGLIFQIRDDYGNLMLKEFTENKSFCEDLTEGKFSFPIM 230 Query: 240 LAFQ 243 A + Sbjct: 231 HAIR 234 >gi|242212676|ref|XP_002472170.1| predicted protein [Postia placenta Mad-698-R] gi|220728728|gb|EED82616.1| predicted protein [Postia placenta Mad-698-R] Length = 328 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 18/225 (8%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +R ++ A LE D ++++ I +HTA+LL DD+ DD+ LRRG A+ ++ Sbjct: 39 GKEIRGLMLEAFNAWLEVPKDKLMIISRVISMLHTASLLIDDIEDDAQLRRGVPASHKIY 98 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVAC----TLAEGELRQLSLSKNL 154 G ++ ++ A+ + +S E L+ + EL L + L Sbjct: 99 GIPQTINSANYAYFLAYQELFTLRSGVDSGDSEPHRLIPFRQLDRVVTAELLSLHRGQGL 158 Query: 155 DV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 ++ TEE+Y+ ++ +KT LF A+++ ++A ++ G+ + Sbjct: 159 ELLWRDSLQCPTEEEYVAMVNNKTGGLFRVAIKL--MMACSTKNIDVDYVPLVNLFGVYY 216 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 Q+ DD ++ + K ED GK + P++ A + T + Sbjct: 217 QIRDDYMNLQSSEYADNKGFAEDLTEGKFSFPIVHAVRSDTSNRR 261 >gi|156554759|ref|XP_001605679.1| PREDICTED: similar to ENSANGP00000021639 [Nasonia vitripennis] Length = 314 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 5/209 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK++R L A L+ + + + +H ++LL DD+ D+S LRRG Sbjct: 28 YILQVPGKQIRGKLAHAFNYWLKIPVEKLQAVGDITQMLHNSSLLIDDIQDNSILRRGIP 87 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G +++ +++L A VI EA + + L G+ ++ N Sbjct: 88 VAHSIYGVASTINAANYVLFIALERVISLNHPEATQVYTEQLLELHRGQGMEIYWRDNFI 147 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +E +Y + KT LF+ A+ + L + ++ LG+ FQ+ DD + Sbjct: 148 CPSEAEYRTMTIRKTGGLFNLAVRLMQLFS----DCKEDFTPLAGILGLYFQIRDDYCNL 203 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + K+ ED GK + P+I A Q Sbjct: 204 CLQEYTENKSYCEDLSEGKFSFPIIHAIQ 232 >gi|325068635|ref|ZP_08127308.1| Polyprenyl synthetase [Actinomyces oris K20] Length = 386 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 52/283 (18%) Query: 38 IFSGGKRLRPMLTLATALMLEYR--------GDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + SGGKR+R +L +L G + V L A+E + L+HDD++D + Sbjct: 47 VLSGGKRMRAVLGAVGCAILSAPKQRAERLTGSDAVHLGTALELYQASALVHDDLMDSAD 106 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-----CMVIETKSQEALEALSLVACTLAEGE 144 RRG AA V+ G Q F ++ + A E +S +A + A + Sbjct: 107 TRRGLPAAHRVFARNHEAR-GWLGRPQTFGANGAILLGDLLLSLAGEEMSALAPSRASSQ 165 Query: 145 LR----------------QLSLSKNLDVTEE-------------------DYLHVIKSKT 169 R +++L + LDV E + L V++ K+ Sbjct: 166 TRSSAVRYARSAFDAMTTEVALGQFLDVRSENLPLPWDQEAGAAARRMQDEALSVVRHKS 225 Query: 170 A---VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 A V + + + L ++G ++GIAFQL DD L G GK G Sbjct: 226 ARYSVRHPLLIGALLAGLDPSGTTAEHLAAFGEDVGIAFQLRDDDLGVFGSPQATGKPAG 285 Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 +D R GK T+ + L + R K + S + + + + E + + Sbjct: 286 DDLREGKRTVLLALTWGRCDKAGRRMLGSVLANPEATEEQIGE 328 >gi|134077098|emb|CAK45439.1| unnamed protein product [Aspergillus niger] Length = 360 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 6/238 (2%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D E+ N + + D ++ +YL + K R L A + + +++ Sbjct: 15 DPERKNPALAAILQLDDTILWKPYEYLTSTPSKGFRNHLIDALQEWYKVPQASLAVISGV 74 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +H A+L+ DD+ DDS LRRGK A ++G ++ F ++ A + ++ +L Sbjct: 75 ASLLHEASLMLDDIQDDSPLRRGKPAVHTIFGVGQTINSARFHINNALRLCLQLSPSASL 134 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 S L G+ L +++ + TEEDY ++ K L + +S L+ Sbjct: 135 -IFSDQIAQLFTGQAHDLQWARHKSIPTEEDYFRMVDGKNGALL---ILISRLMQNEATQ 190 Query: 190 VRQALKSYGMNL-GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 R ++ MNL G + QL DD + + + +D GK + P+I A Q T Sbjct: 191 NRTLDLTHFMNLIGRSHQLRDDYQNLASQDYTTQRGFCQDLDEGKFSFPLIRAIQSST 248 >gi|302913154|ref|XP_003050856.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731794|gb|EEU45143.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 419 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 6/229 (2%) Query: 13 EKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 E +NF + D E ++ Y+I GK R L A L+ ++ ++ + Sbjct: 115 EDLNFTAKRTWTDDKEQVVRGPYDYVISHPGKDFRAQLINAFNAWLDVPQESLDVITRVV 174 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 +H ++LL DDV D S LRRG A ++G ++ +++ A + + + + Sbjct: 175 GMLHESSLLIDDVQDSSELRRGFPVAHNIFGVAQTINSANYIYFIALQELHRLNNPDLIT 234 Query: 132 ALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 S L G+ L L TEEDYL ++ +KT LF ++ + ++SV Sbjct: 235 VFSEELVNLHRGQGMDLFWRDTLTCPTEEDYLEMVGNKTGGLFRLGIK----LMAAESSV 290 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +G+ FQ+ DD ++ + K + ED GK + PVI Sbjct: 291 PTDCVPLVNLIGLIFQIRDDYMNLSSKEYSHNKGMCEDLTEGKLSFPVI 339 >gi|255945615|ref|XP_002563575.1| Pc20g10860 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588310|emb|CAP86415.1| Pc20g10860 [Penicillium chrysogenum Wisconsin 54-1255] Length = 732 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 22/190 (11%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +++ A+ F+H ++LL DD+ D S LRRG+ A ++G ++ +L+++A ++ Sbjct: 424 LIIEGAVNFLHNSSLLLDDIQDGSFLRRGRPVAHQIFGVGQTINTATYLMNEALYLI--- 480 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSA 175 + + S V+ E+R L L + D+ T Y+ ++ KT LF Sbjct: 481 ----QMLSPSAVSVYTEIDEMRNLQLGQGRDLYWSYHTHVPTPAQYISMVDGKTGGLFRL 536 Query: 176 ALEVSSLI--AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 +S L+ +NS + + LG FQ+ DD + + E K +D GK Sbjct: 537 ---ISRLMRSEATKNSDLD-ISQFATLLGRHFQIRDDYQNLQSEDYTKNKGFCDDLDEGK 592 Query: 234 PTLPVILAFQ 243 + P+IL+ Q Sbjct: 593 LSFPIILSMQ 602 >gi|126460364|ref|YP_001056642.1| polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548] gi|126250085|gb|ABO09176.1| Polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548] Length = 261 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 15/169 (8%) Query: 62 DNHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D +L A AI E +H +LL DDV+D RRG R ++G+ +++ D+L++++ M Sbjct: 65 DPRILEAAAIVELLHVVSLLQDDVMDQHDQRRGIKTPRAMYGDGRAIVASDWLIAESIKM 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + V LA+ R LS+ + LD+ E + + KTA L AAL + Sbjct: 125 AVNLGAD--------VVTYLADVAQR-LSVGQALDL-EGERDKAAEFKTAPLIEAALVMP 174 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD---YRGEVNEMGKNIG 226 +I G + + A K G LGI +Q DD D R E + IG Sbjct: 175 LVILGRRELIETA-KKLGTKLGILYQYSDDYSDENVERPETKSIANEIG 222 >gi|192290105|ref|YP_001990710.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] gi|192283854|gb|ACF00235.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] Length = 288 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 15/211 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDVV--DD 87 ++ +F G R+RP L + AL DN + A+E +H A+L+HDD+ D Sbjct: 30 AMRSAVFPRGARVRPRLCHSVALACGE--DNPGITEAAGAALELMHCASLIHDDLPCFDG 87 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALSLVACTLAEGEL 145 + LRRG+ + +G +VL GD ++ AF + E + L+ ++ + G Sbjct: 88 ADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQTIARAEGPADRLLKLTQIIGGAV--GVP 145 Query: 146 RQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + + + TE + H +SKT LF AA + + AG S + + G +G A Sbjct: 146 FGIVAGQAWECETEINLAHYHRSKTGALFVAATAMGAASAG---SDPEPWRMVGEKIGEA 202 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +Q+ DD+ D +V E+GK +G+D + +P+ Sbjct: 203 YQVADDLRDAAADVEEIGKPVGQDVAHDRPS 233 >gi|171185989|ref|YP_001794908.1| polyprenyl synthetase [Thermoproteus neutrophilus V24Sta] gi|170935201|gb|ACB40462.1| Polyprenyl synthetase [Thermoproteus neutrophilus V24Sta] Length = 263 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 120/232 (51%), Gaps = 17/232 (7%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 M +L L +E+V L+ + SD+ + + + V+Y I GK LRP+L L + L+ Sbjct: 1 MSVLPGEVLAALERVKTH-LQNVGSDIRPQSLREAVRYYIERPGKLLRPLLLLTFSYTLD 59 Query: 59 YRG--DNHVLLACAI-EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 R D ++ A AI E +H +LL DDV+D RRG R ++G+ S++ D+L++ Sbjct: 60 RRSVLDLRIIQAAAIVELLHVVSLLQDDVMDKHDERRGAKTPRALYGDGRSIVASDWLIA 119 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 ++ ++ + ++ L+ VA ++LS+ + LD+ + Y + KTA L A Sbjct: 120 ESIKRALQL-GPDIVKYLADVA--------QRLSIGQALDL-DGRYDEAAEFKTAPLIEA 169 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 +L + +++ G + + + K G LG+ +Q DD D + E E + + E Sbjct: 170 SLVLPAMLLG-RREILDSAKKLGQLLGVLYQYADDYSDEKIERREATELVDE 220 >gi|260905289|ref|ZP_05913611.1| Polyprenyl synthetase [Brevibacterium linens BL2] Length = 401 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 70/237 (29%), Positives = 99/237 (41%), Gaps = 50/237 (21%) Query: 41 GGKRLRPMLTLATALMLEYRGDNH--------VLLACAIEFIHTATLLHDDVVDDSALRR 92 GGK +RP+L L L D+ A ++E +H A L+HDDV+D S RR Sbjct: 75 GGKMIRPVL-LWWGFQLASGDDSSRSALNGGVAEAAGSLELLHAAALIHDDVIDHSDTRR 133 Query: 93 GKVA----------------ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 GK A +G ++++GD L A + KSQ L ++ Sbjct: 134 GKPALHRQFESRHSERRFQGGAEPFGVAAAIVIGDICL--ALSEELFEKSQSVL-GITPS 190 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA--- 193 A L R + + + LDV E V+ A + A EV S + + SV Q Sbjct: 191 ARDLRATLRRDVMVGQYLDVLAE----VVPLDDARIGERAWEVLSFKS-AKYSVEQPLLL 245 Query: 194 --------------LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + +G+ LG AFQL DDVL G+ GK G+D R GK T+ Sbjct: 246 GAALGGADEEQLAEISRFGLPLGQAFQLRDDVLGIFGDPAATGKPAGDDIREGKRTV 302 >gi|1220524|gb|AAA91949.1| geranylgeranyl pyrophosphate synthase [Streptomyces griseus] gi|1632833|emb|CAA64849.1| GGPP synthase [Streptomyces griseus] Length = 425 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 102/249 (40%), Gaps = 55/249 (22%) Query: 34 VKYLIFSGGKRLRPML---------TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 V GGKR+RP L TA L L A+E I + L+HDDV Sbjct: 75 VADFTLEGGKRMRPRLLWWGMRSCGAAETAAALR--------LGVALELIQSCALIHDDV 126 Query: 85 VDDSALRRGKVAARLV----------------WGNQTSVLVGDFLLSQAFCMVIET---- 124 +D S LRRGK A + +G +VL GD L A V ET Sbjct: 127 MDRSRLRRGKPAMHIGLAERAGLSPDSERGSDFGASAAVLAGDLALVWADDTVAETVLSA 186 Query: 125 KSQEALEAL-SLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAALEV-- 179 + + AL + + G+ L LS V + +TA L SA+ V Sbjct: 187 AQRRRIGALWRAMRTEMVAGQYLDLRGQLSGGSSVAQ-------ALRTACLKSASYSVER 239 Query: 180 ----SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + +AG + AL+S G GIAFQL DD+L G+ GK G+D R GK T Sbjct: 240 PLAIGAALAGADDRTTDALRSAGRCAGIAFQLRDDLLGVFGDPALTGKPSGDDIREGKST 299 Query: 236 LPVILAFQR 244 +LA R Sbjct: 300 Y--LLAVAR 306 >gi|322693895|gb|EFY85740.1| geranylgeranyl pyrophosphate synthetase AtmG [Metarhizium acridum CQMa 102] Length = 331 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 27/224 (12%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E+I YL+ GK +R + A L D ++ I +H A+LL DD+ D Sbjct: 38 EIIRAPFDYLLNLPGKDVRSKMISAFNEWLCIPVDKLEVIKRIIMLLHNASLLIDDIQDS 97 Query: 88 SALRRGKVAARLVWGNQTSVLVGD---FLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 S LRRG + ++G ++ + FL Q + + K+ E + E Sbjct: 98 SKLRRGLPVSHHIFGVPQTINAANYAYFLAQQELPKLGDPKAFE-----------IYTEE 146 Query: 145 LRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L L + +D+ TEE+Y ++ KT LF A+ + L A +N L Sbjct: 147 LLSLHRGQGMDIYWREASKCPTEEEYFSMVSHKTGGLFRLAIRLMQL-ASDKNCDFVPLV 205 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + LG+ FQ+ DD L+ + + K GED GK + P+I Sbjct: 206 NV---LGVIFQIRDDYLNLQSHAYTVNKGFGEDLTEGKYSFPII 246 >gi|134057661|emb|CAK38059.1| unnamed protein product [Aspergillus niger] Length = 346 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 3/205 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL+ S GK +R A L + ++ + +HTA+LL DD+ D+S LRRG Sbjct: 66 YLLKSPGKDIRRKFIHAFNEWLRIPEEKLNIITEIVGLLHTASLLIDDIQDNSKLRRGLP 125 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ ++ A + E EA E + L G+ L +L Sbjct: 126 VAHSIFGIAQTINSANYAYFLAQERLRELNHPEAYEIYTEELLRLHRGQGMDLYWRDSLT 185 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEEDY+ +I +KT LF A+++ L + V + LG+ FQ+ DD + Sbjct: 186 CPTEEDYIEMIANKTGGLFRLAIKLMQLETETKRQV--YVIELADLLGVIFQIRDDYQNL 243 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVI 239 + + K ED GK + +I Sbjct: 244 QSGLYTKNKGFCEDLTEGKFSFLII 268 >gi|163745285|ref|ZP_02152645.1| geranyltranstransferase [Oceanibulbus indolifex HEL-45] gi|161382103|gb|EDQ06512.1| geranyltranstransferase [Oceanibulbus indolifex HEL-45] Length = 294 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 115/265 (43%), Gaps = 23/265 (8%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + + ++Y +GGK LR L + +A + A AIE +H +L+HDD+ Sbjct: 36 VAEAMRYAC-TGGKGLRGFLVIESARLHGIAPGMAAPAAGAIEALHAYSLVHDDLPCMDD 94 Query: 90 --LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGELR 146 LRRG+ W T+VL GD L + F ++ S EA LSL+ + Sbjct: 95 DDLRRGQPTVHRKWDEATAVLAGDALQTLTFELIGHLPCSAEAR--LSLMTSLAGAAGVG 152 Query: 147 QLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 + + LD+ E + + KT L + +AG + AL Y Sbjct: 153 GMVGGQALDIAAETAPAPLSLAEITALQAGKTGALIEWSAMAGPRMAGADAT---ALGQY 209 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK--- 254 +LG+AFQ+ DD+LD G+ +GK +G+D GK T +L R Sbjct: 210 AKHLGLAFQIADDILDVEGDAETVGKAVGKDDAAGKATFVSLLGLDGAKTRAAELVDMAC 269 Query: 255 STINDGKISVENLK--KAFIIMREN 277 ++D ++L+ AF+I R++ Sbjct: 270 DALSDYGQEAQSLRAAAAFVIARDS 294 >gi|148231821|ref|NP_001091413.1| geranylgeranyl diphosphate synthase 1 [Xenopus laevis] gi|126631300|gb|AAI33765.1| LOC100049104 protein [Xenopus laevis] Length = 296 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 21/216 (9%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KY++ GK++R L+ A L D ++ E +H A+LL DD+ D+S LRRG Sbjct: 17 KYVLQLPGKQIRTKLSQAFNHWLNVPDDKIQVIIEVTEMLHNASLLIDDIEDNSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ A+ + +L +L + L Sbjct: 77 PVAHSIYGIPSVINSANYVYFLGLEKVLTMNHPNAVHVFT--------QQLLELHRGQGL 128 Query: 155 DV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 D+ +E +Y ++ KT LF A+ + L + ++ L + LG+ F Sbjct: 129 DIYWRDTYTCPSEAEYKAMVLQKTGGLFGLAVGLMQLFSSNDKDLKPLLNT----LGLFF 184 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 Q+ DD + + K+ ED GK + P I A Sbjct: 185 QIRDDYANLNSKEYSENKSFCEDLTEGKFSFPTIHA 220 >gi|62288319|gb|AAX78435.1| farnesyl diphosphate synthase [Dendroctonus jeffreyi] Length = 429 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 113/238 (47%), Gaps = 38/238 (15%) Query: 42 GKRLRPMLTLATALMLE----YRGDN----HVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GK+ R ++ L+T MLE +N +L CA E +H L+ DD++D S RRG Sbjct: 131 GKKNRGLIILSTYRMLEDPEKLTPENIRLASILGWCA-EMVHAYVLILDDIMDGSETRRG 189 Query: 94 KVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 L W Q+ + V D ++ A ++I+ ++ + L+ EG L+ + Sbjct: 190 A----LCWFRQSGIGLTAVNDAVMIENAVYLLIKRHLKDHPMYVPLMEL-FHEGNLKT-T 243 Query: 150 LSKNLDV--------------TEEDYLHVIKSKTAVL-FSAALEVSSLIAGV--QNSVRQ 192 L ++LD T Y ++K KTA F + ++ +AG+ + RQ Sbjct: 244 LGQSLDAMCLDTNGKPKLDMFTMSRYTSIVKYKTAFYSFQMPVAIAMYLAGMSDEEQHRQ 303 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A K+ M +G FQ+ DD LD G+ GK +G D ++GK + ++A QR + ++ Sbjct: 304 A-KTILMEMGQFFQIQDDFLDCFGDPTVTGK-VGTDIQDGKCSWLAVVALQRASPAQR 359 >gi|241836196|ref|XP_002415093.1| geranylgeranyl diphosphate synthase, putative [Ixodes scapularis] gi|215509305|gb|EEC18758.1| geranylgeranyl diphosphate synthase, putative [Ixodes scapularis] Length = 288 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 9/218 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 ++I Y++ GK++R L A L+ + ++ ++ +H A+LL D+ Sbjct: 8 QIILQPYHYILKIPGKQIRTKLAQAFNYWLKISPEKCQVIGEIVQMLHNASLLQDN---- 63 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S+LRRG A ++G +++ +++ +E + A + L G+ + Sbjct: 64 SSLRRGVPVAHNIFGVASTINSANYVYFLGLEKCLELDNPRATAVFTEQILELHRGQGME 123 Query: 148 LSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + N + TE DY ++K KT LF A+ + L + + + + + + LG+ FQ Sbjct: 124 IYWRDNYICPTESDYSRMVKRKTGGLFGLAVGLMQLFSENKGNFTKLIGT----LGLYFQ 179 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + DD + + K+ ED GK + P+I A Q+ Sbjct: 180 IRDDYANLMLKEYTDNKSFAEDLTEGKFSFPIIHAIQQ 217 >gi|159040415|ref|YP_001539668.1| polyprenyl synthetase [Salinispora arenicola CNS-205] gi|157919250|gb|ABW00678.1| Polyprenyl synthetase [Salinispora arenicola CNS-205] Length = 384 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 79/273 (28%), Positives = 108/273 (39%), Gaps = 46/273 (16%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 D TL D L I V + + +GGKR+RP T A G Sbjct: 41 DDTLDDFLSAEMDTLTAIDQAVGGFAVTARDSVLAGGKRVRP--TFAYWGWRGVAGGGEP 98 Query: 66 LLACAIEFIHTATL-----LHDDVVDDSALRRGKVAARLV----------------WGNQ 104 L L +HDDV+D SA RRG+ A + +G Sbjct: 99 LPPVLPALAALELLHAFALIHDDVMDSSATRRGRPTAHVAVAAQHAAAGRRGDPGKFGET 158 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-------TLAEGELRQLSLSKNLDVT 157 ++LVGD L A ++ A L + C T+A L L S + + Sbjct: 159 VAILVGDLCLVWADRLLARAALPPA-RLLEVRRCYDQMRVETIAGQYLDVLGESDPTNWS 217 Query: 158 EEDYLHVIKSKTA-------VLFSAALEVSSLIAGV--QNSVRQALKSYGMNLGIAFQLV 208 + L V + KTA +LF A L AGV + + A YG+ +G AFQL Sbjct: 218 VDRALQVARYKTASYTVQWPLLFGARL------AGVVAEPPLIAAYTRYGLAVGEAFQLC 271 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 DD+L G+ GK G+D R GKPT ++LA Sbjct: 272 DDLLGVYGDPATTGKPAGDDLRTGKPTALLMLA 304 >gi|316935308|ref|YP_004110290.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1] gi|315603022|gb|ADU45557.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1] Length = 288 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 15/211 (7%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDV--VDD 87 ++ +F G R+RP L + AL DN + A+E +H A+L+HDD+ D Sbjct: 30 AMRGAVFPRGARVRPRLCHSVALACGE--DNPGITEAAGAALELMHCASLIHDDLPCFDG 87 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETKSQEALEALSLVACTLAEGEL 145 + LRRG+ + +G +VL GD ++ AF + ++ + L+ ++ + G Sbjct: 88 ADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQTIARVDGPADRLLKLTQIIGSAV--GVP 145 Query: 146 RQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + + + E + H +SKT LF AA + + AG S + + G +G A Sbjct: 146 FGIVAGQAWECESEINLAHYHRSKTGALFVAATAMGAASAG---SDPEPWRMVGEKIGEA 202 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +Q+ DD+ D +V E+GK +G+D + +P+ Sbjct: 203 YQVADDLRDAAADVEEIGKPVGQDIAHDRPS 233 >gi|310814826|ref|YP_003962790.1| geranylgeranyl pyrophosphate synthetase [Ketogulonicigenium vulgare Y25] gi|308753561|gb|ADO41490.1| geranylgeranyl pyrophosphate synthetase [Ketogulonicigenium vulgare Y25] Length = 290 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 20/203 (9%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG+ W T++L GD L S F ++ ++ L A G + + Sbjct: 93 LRRGRPTVHRQWDEATALLAGDALQSLGFELIATAALPDSARVTLLAGFARAAG-IHGMV 151 Query: 150 LSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + D+ E + + + KT L + + +++AG + L+++G Sbjct: 152 GGQEADIAAETAARPLSLDQIIALQRGKTGALITWSASAGAVMAGADAA---PLRAFGDA 208 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G+AFQ+ DD+LD G MGK + +D GK T +L Q G K + T + Sbjct: 209 IGLAFQITDDILDVEGSAATMGKAVQKDAAAGKATFVSLLGLQ-GAKDQALALLQTADAA 267 Query: 261 KI----SVENLKKA--FIIMREN 277 I + L++ F+I R+N Sbjct: 268 LIPYGATAATLRETAQFVITRQN 290 >gi|46117498|ref|XP_384767.1| hypothetical protein FG04591.1 [Gibberella zeae PH-1] Length = 368 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 23/222 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E+I + YL+ GK +R + A L+ D ++ I +H A+LL DD+ D Sbjct: 33 EIIRAPLTYLLNLPGKDVRSKMIAAFNQWLKIPEDKLDVIKRIIMLLHNASLLLDDIQDS 92 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-ACTLAEGELR 146 S LRRG + ++G ++ ++ AF + +Q+ L L A + EL Sbjct: 93 SKLRRGLPVSHSIFGIAQTINAANY----AFFL-----AQQELPKLGDARAFEIFTEELL 143 Query: 147 QLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L + +D+ TEE+Y ++ +KT LF A+++ L + + Sbjct: 144 HLHRGQGMDIYWRDASICPTEEEYFTMVSNKTGGLFRLAVKLMQLASESDKDYVPLVNV- 202 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 LG+ FQ+ DD L+ + K GED GK + P+I Sbjct: 203 ---LGVIFQIRDDYLNLQSGNYAKNKGFGEDLTEGKFSFPII 241 >gi|8272412|dbj|BAA96458.1| farnesyl diphosphate synthase [Rhodobacter capsulatus] Length = 288 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 15/231 (6%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 D + Y GGKRLR L + +A + + + A A+E +H +L+HDD+ +D+ Sbjct: 31 DAMAYAA-QGGKRLRAFLAIESAAIHGISMEQAMPAALAVEALHAYSLVHDDMPCMDNDD 89 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF--CM--VIETKSQEALEALSLVACTLAEGEL 145 LRRG W T+VL GD L + AF C V+ + +L + AEG + Sbjct: 90 LRRGLPTVHRKWDEATAVLAGDALQTLAFELCTDPVLGSAENRVALVAALAQASGAEGMV 149 Query: 146 RQLSL-----SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 +L + + +T ++ + + KT L S A + ++IAG R L +Y Sbjct: 150 YGQALDIAAETAAVPLTLDEIIRLQAGKTGALISFAAQAGAIIAGAD---RALLAAYATA 206 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 LG+AFQ+ DD+LD G+ GK +G+D K T +L R + Sbjct: 207 LGLAFQIADDILDVEGDEEAAGKRLGKDAEAHKATFVSLLGLPGAKARAAD 257 >gi|195492530|ref|XP_002094031.1| GE21608 [Drosophila yakuba] gi|194180132|gb|EDW93743.1| GE21608 [Drosophila yakuba] Length = 338 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 6/224 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ Y+ GK+ R L LA L G+ + ++ +H ++LL DD+ D+ Sbjct: 22 EILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQMLHNSSLLIDDIEDN 81 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ L A V + EA + + L G+ + Sbjct: 82 SILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEATKVYTEQLLELHRGQGME 141 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + +E DY + KT LF A+ + L + + ++ LG+ FQ Sbjct: 142 IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS----TNKEDYSKLTAILGLYFQ 197 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD + + K+ ED GK PVI A R K++K Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV-RTQKQDK 240 >gi|241620359|ref|XP_002408650.1| polyprenyl synthetase, putative [Ixodes scapularis] gi|215503009|gb|EEC12503.1| polyprenyl synthetase, putative [Ixodes scapularis] Length = 355 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK 94 GGKR R + + +L H+ LAC +E + + L+ DD++D S +RRG+ Sbjct: 60 LPGGKRNRLLAVVHAYELLAEESVPHLELACVLGWCVEMLQSYFLILDDIMDGSPVRRGR 119 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ------- 147 + V G + L +A V+ + L + C L EL Q Sbjct: 120 PSWYTVPGVGLRAINDALFLEKAVLWVVRRR-------LGHLRCYLPLSELFQESDLRTV 172 Query: 148 -------LSLSKNLDVTEED-YLHVIKSKTAVLFSAALEVSS--LIAGVQNS-VRQALKS 196 LS LD D Y ++ KTA +S L V + L+AGV++ + + Sbjct: 173 LGQGLDMLSQKSTLDALRADRYWAIVTYKTA-FYSFVLPVRAGMLLAGVEDPGLHAQAQQ 231 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 + LG FQ+ DD +D G+ GK +G D +GK + + A QRG+ +++ ++ Sbjct: 232 AALQLGRVFQVQDDYIDCFGDPEVTGK-VGTDIVDGKCSWLAVQAAQRGSPAQRSVLEAN 290 Query: 257 INDG 260 + G Sbjct: 291 LGKG 294 >gi|126727249|ref|ZP_01743085.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium HTCC2150] gi|126703458|gb|EBA02555.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium HTCC2150] Length = 287 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 15/224 (6%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAA 97 +GGKRLR L L A + ++ + A A+E +H +L+HDD+ LRRG+ Sbjct: 38 TGGKRLRGFLVLEGASLHGVAANDALNAAAAVEALHAYSLVHDDLPCMDDDDLRRGQPTV 97 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVT 157 + W T+VL GD L + AF ++ +T A +SL+ + L + +D+ Sbjct: 98 HVKWDYATAVLAGDALQTLAFDLLADTPV-SADRQISLIKGMAVASGAAGMVLGQAMDIA 156 Query: 158 EEDY-----LHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 E L+ I +KT L + E ++AG + + Y LG+AFQ+ Sbjct: 157 AETAETPLDLNAITLLQANKTGALIRWSAEAGPILAGDDPT---PMCDYATALGLAFQIA 213 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 DD+LD G+ + GK + +D GK T +L R + Sbjct: 214 DDILDIEGDAAKAGKKLQKDAAAGKATFVSLLGLDGAKARAREL 257 >gi|119476621|ref|ZP_01616931.1| Farnesyltranstransferase [marine gamma proteobacterium HTCC2143] gi|119449877|gb|EAW31113.1| Farnesyltranstransferase [marine gamma proteobacterium HTCC2143] Length = 311 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 12/220 (5%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 KY GK R L L++ L +++ A A E +H A+L+HDD+ D S RR Sbjct: 25 AAKYHFTHPGKSFRAQLALSSGCSLGLSTTDNLHWAAACELLHNASLIHDDISDASTHRR 84 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL---AEGELRQLS 149 G+ + +G ++ +GD+++++AF + SQ ++L+A + G++ +S Sbjct: 85 GQESIHQHFGADMALCLGDWMVAKAFELGAR-NSQHGSVLVALLAQAMQATCSGQIADIS 143 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 + + E + + KTA L A + +++ AG++ + G+ G+A+Q + Sbjct: 144 QRQCAGLDE--WQCIATGKTAPLLIAPIRGAAVAAGLKADLSGLEHLVGL-CGLAYQGRN 200 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 D+ D + D KP L + L Q+G E Sbjct: 201 DIDDIIPSSHR-----SSDLDGRKPNLVISLFAQQGIGCE 235 >gi|99082761|ref|YP_614915.1| farnesyl-diphosphate synthase [Ruegeria sp. TM1040] gi|99039041|gb|ABF65653.1| farnesyl-diphosphate synthase [Ruegeria sp. TM1040] Length = 287 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 18/223 (8%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGK LR L L +A + + + A AIE IH +L+HDD+ LRRG+ Sbjct: 40 GGKMLRGFLVLESARLHDVPETAAIEAALAIECIHAYSLVHDDLPAMDDDDLRRGQPTLH 99 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL-DVT 157 W T+VL GD L + AF ++ + ALSL+ TLA+ + +S + D+ Sbjct: 100 RKWDEATAVLAGDSLQTLAFELL--ARDSVGPNALSLIR-TLAQAAGKDGMVSGQMMDIA 156 Query: 158 EE--------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 E D + +++ KT L + + +AG + L+ Y LG+AFQ+ Sbjct: 157 AETAETPLTLDEITTLQARKTGCLIEWSACAGARLAGADPA---PLRHYAQALGLAFQIA 213 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 DD+LD G+ +GK + +D GK T L + R + Sbjct: 214 DDILDVEGDAATVGKAVRKDADAGKATFVSHLGLEGAKHRARE 256 >gi|322800773|gb|EFZ21659.1| hypothetical protein SINV_04639 [Solenopsis invicta] Length = 348 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 75/250 (30%), Positives = 113/250 (45%), Gaps = 32/250 (12%) Query: 30 IPDVVKYL------IFSGGKRLRPMLTLATALML----EYRGDNHVL---LACAIEFIHT 76 IPDV K++ GK+LR + + L + DN L LA +E + T Sbjct: 32 IPDVAKWMEKVSQYTVPKGKKLRGLTLIKVYKSLVSNDQLTEDNIRLVQILAWCVELMQT 91 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD-FLLSQAFCMVIET--KSQEA---- 129 L+ DD+ D S LRRG+ L + N V D LL A +I K +E Sbjct: 92 YILVLDDIQDHSLLRRGQPCWHL-YSNVGEAAVNDGVLLESAMYYIIRKHFKGKECYVNL 150 Query: 130 LEALSLVACTLAEGELRQLSLS-----KNLDV-TEEDYLHVIKSKTAVLFSAALEVSSL- 182 +E + G+ L S NLD+ T + + +I+ KTA +++ Sbjct: 151 VETFQDIIFKTLMGQCMDLYSSNFGKKPNLDLFTIDRHNTIIEIKTAYYTYVLPTFAAMH 210 Query: 183 IAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 AG++N RQA K + +G FQ+ DD LD G+ GKN G D ++GK T +++ Sbjct: 211 FAGIKNPEMFRQA-KIIALEIGHMFQVQDDYLDCFGDTEICGKN-GIDIQDGKCTWLIVV 268 Query: 241 AFQRGTKREK 250 A QR T ++ Sbjct: 269 ALQRATFEQR 278 >gi|297661612|ref|XP_002809327.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Pongo abelii] Length = 246 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 5/169 (2%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H A+LL DD+ D+S LRRG A ++G + + +++ V+ +A++ Sbjct: 2 LHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLF 61 Query: 134 SLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + L +G+ + N TEE+Y ++ KT LF A+ + L + + ++ Sbjct: 62 TRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKP 121 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L + LG+ FQ+ DD + + K+ ED GK + P I A Sbjct: 122 LLNT----LGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 166 >gi|194865508|ref|XP_001971464.1| GG14418 [Drosophila erecta] gi|190653247|gb|EDV50490.1| GG14418 [Drosophila erecta] Length = 338 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 6/224 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ Y+ GK+ R L LA L G+ + ++ +H ++LL DD+ D+ Sbjct: 22 EILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQMLHNSSLLIDDIEDN 81 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ L A V + EA + + L G+ + Sbjct: 82 SILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEATKVYTEQLLELHRGQGME 141 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + +E DY + KT LF A+ + L + + ++ LG+ FQ Sbjct: 142 IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS----NNKEDYSKLTAILGLYFQ 197 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD + + K+ ED GK PVI A R K++K Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV-RTQKQDK 240 >gi|182433853|ref|YP_001821572.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|182440870|ref|YP_001828589.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462369|dbj|BAG16889.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178469386|dbj|BAG23906.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 402 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 82/308 (26%), Positives = 116/308 (37%), Gaps = 59/308 (19%) Query: 34 VKYLIFSGGKRLRPMLTL-ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 V GGKR+RP+L A + + L A+E I T L+ DDV+D S RR Sbjct: 74 VADFALRGGKRMRPLLLWWAMRACSGAESEAALRLGVALELIQTCALIQDDVMDRSHTRR 133 Query: 93 GKVAARLV----------------WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 G+ A + +G +VL GD L A V ET Sbjct: 134 GRPAVHIALAEQRGLAAGSGPGAAFGASAAVLAGDLALVWADDTVGET------------ 181 Query: 137 ACTLAEGELRQ---LSLSKNLDVTEEDYLHVIKS-----------KTAVLFSAALEVSSL 182 L G RQ L S ++ YL + +TA L SA V Sbjct: 182 --FLPPGRRRQVRALWRSMRGEMIAGQYLDLRGQIGGGASAARALRTAHLKSALYSVERP 239 Query: 183 IAGVQNS------VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +A AL+S G+AFQL DD+L G+ GK G+D R GKPT Sbjct: 240 VALGAALAGADEWTTDALRSASRYAGMAFQLRDDLLGVFGDPAVTGKPSGDDIREGKPTY 299 Query: 237 PVILAFQR------GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290 +LA R G R + + + + + L++ ++ A E +A Sbjct: 300 --LLAVARTCADAAGDHRALAVLERAVGNPDLDEDGLEEVRSVLESTGARALVEDKAERL 357 Query: 291 GQKAKDSL 298 G++A L Sbjct: 358 GERAARRL 365 >gi|89148075|gb|ABC46867.3| geranylgeranyl diphosphate synthase [Stevia rebaudiana] Length = 147 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 82/150 (54%), Gaps = 16/150 (10%) Query: 73 FIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IHT +L+HDD+ VD+ RRGK + V+G + +VL GD LLS +F + + Sbjct: 1 MIHTMSLVHDDLPCVDNDDFRRGKPTSHKVYGEEMAVLTGDALLSLSFEHIATATKGVSK 60 Query: 131 E---------ALSLVACTLAEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEV 179 + A S+ + L G++ + LS+ DV + +Y+H+ KTA+L +++ + Sbjct: 61 DRIVRVIGELARSVGSEGLVAGQVVDI-LSEGADVGLDHLEYIHI--HKTAMLLESSVVI 117 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 +++ G + + L+ + ++G+ FQ+VD Sbjct: 118 GAIMGGGSDQQIEKLRKFARSIGLLFQVVD 147 >gi|71390084|ref|XP_802181.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70858312|gb|EAN80735.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 173 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 5/106 (4%) Query: 143 GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV-RQALKSYGMNL 201 GE+ Q+ ++ E Y KTA L + +L ++++AG N+ +A +G +L Sbjct: 2 GEMMQMDGCFDI----ESYEQKSYCKTASLIANSLASTAVLAGFPNTAYEEAAAKFGKHL 57 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 GIAFQ+VDD LD G+ +GK D G TLPV+LA + T+ Sbjct: 58 GIAFQIVDDCLDITGDDKNLGKPKMADMAEGIATLPVLLAAREETQ 103 >gi|257877744|ref|ZP_05657397.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC20] gi|257811910|gb|EEV40730.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC20] Length = 177 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 7/94 (7%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRGDNH----VLLACAIEFIHTATLLHDDVVDDSALRR 92 +I SGGK LRP L L Y D V LA +IE +HTA+L+HDD+VD + RR Sbjct: 42 MIHSGGKLLRPAYQL---LFSAYGSDKDREKAVALAASIEMLHTASLIHDDIVDHADTRR 98 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 R +GN +V GD+L F ++ + S Sbjct: 99 KLPTIRSEFGNDVAVYAGDYLFVCCFKLMADYAS 132 >gi|332812281|ref|XP_003308877.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4 [Pan troglodytes] gi|119590424|gb|EAW70018.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Homo sapiens] gi|119590426|gb|EAW70020.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Homo sapiens] gi|221039434|dbj|BAH11480.1| unnamed protein product [Homo sapiens] Length = 246 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 5/169 (2%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H A+LL DD+ D+S LRRG A ++G + + +++ V+ +A++ Sbjct: 2 LHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLF 61 Query: 134 SLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + L +G+ + N TEE+Y ++ KT LF A+ + L + + ++ Sbjct: 62 TRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKP 121 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L + LG+ FQ+ DD + + K+ ED GK + P I A Sbjct: 122 LLNT----LGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 166 >gi|62959233|gb|AAY23724.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-435] Length = 145 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 12/144 (8%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVA 137 HDD+ +DD LR GK + T+VL GD L + AF ++ + S + LVA Sbjct: 1 HDDLPGMDDDELRHGKPTLHRAFDEATAVLAGDCLHALAFDILTQPDTSTDPFTRAELVA 60 Query: 138 CTLAEGELRQ-LSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNS 189 TLA + ++ + +D+ E+ + ++ KT L +A++E+ +++ V Sbjct: 61 -TLARASGHEGMAGGQMMDIVSEEQAYDLRQVTRLQQLKTGALLAASVEMGAVLGRVPPE 119 Query: 190 VRQALKSYGMNLGIAFQLVDDVLD 213 R L++Y ++G+AFQ+ DD+LD Sbjct: 120 GRTHLRAYARDIGLAFQIADDILD 143 >gi|125600856|gb|EAZ40432.1| hypothetical protein OsJ_24885 [Oryza sativa Japonica Group] Length = 333 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 24/198 (12%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVLLACAIEFIHTATLLHDDVVDDSA--L 90 ++Y + + G R+ P L+LA R + A A E +HT +L+HDD Sbjct: 1 MRYALLAAGNRVGPALSLAAFPRCSGARRPWPLPAAAAFEMVHTLSLVHDDFPCMDDDDF 60 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV---------IETKSQEA--LEALS-LVAC 138 RRGK +V+G +VL GD LLS +F + I+ A + A+ L C Sbjct: 61 RRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARC 120 Query: 139 TLAEG-------ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +EG +L ++ + + +Y+H+ KTA L A++ + +++ G + Sbjct: 121 IGSEGLVAGQVVDLEMTGSTETVPLERLEYIHL--HKTAALLEASVVIGAILGGGSDEQI 178 Query: 192 QALKSYGMNLGIAFQLVD 209 ++L+ Y ++G+ FQ+VD Sbjct: 179 ESLRMYARSIGLLFQVVD 196 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 59/102 (57%), Gaps = 6/102 (5%) Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 +Y+H+ KTA L A++ + +++ G + ++L+ Y ++G+ FQ+VDD+LD Sbjct: 212 EYIHL--HKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSE 269 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 E+GK G+D + K T P +L G ++ + F + ++D + Sbjct: 270 ELGKTAGKDLASDKTTYPKLL----GLEKSREFAEKLLSDAR 307 >gi|328848703|gb|EGF97904.1| hypothetical protein MELLADRAFT_41117 [Melampsora larici-populina 98AG31] Length = 297 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 16/178 (8%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQEA 129 IH A+LL DD+ DDS LR+GK A V+G ++ ++ A+ + + KS E Sbjct: 47 IHVASLLIDDIQDDSDLRKGKPVAHTVYGVAQTINTATYVFFDAYRNISKLTPFLKSPEI 106 Query: 130 LEALSLV---ACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + S++ L G+ + L +L TEE+YL +I +KT +F +++ L Sbjct: 107 TDLGSIIDDEIMALHRGQGKDLYWRDSLICPTEEEYLRMIHNKTGAMFRLPIKLCKLY-- 164 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + +GI Q+ +D+L E E K EDF GK + P+I A + Sbjct: 165 ----LHDCFPLVNI-IGILAQIQNDLLSLSREFTE-DKGFCEDFSEGKFSFPIIHAIK 216 >gi|167947660|ref|ZP_02534734.1| farnesyl-diphosphate synthase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 111 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 2/75 (2%) Query: 39 FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVA 96 + GKR+RP+LT AT L + ACA+E IH +L+HDD+ +DD LRRG+ Sbjct: 36 LAAGKRIRPILTYATGQALGVEINQLDTAACAVEMIHAYSLVHDDLPAMDDDELRRGRPT 95 Query: 97 ARLVWGNQTSVLVGD 111 + T++LVGD Sbjct: 96 CHKAYDEATAILVGD 110 >gi|322705366|gb|EFY96952.1| geranylgeranyl pyrophosphate synthetase AtmG [Metarhizium anisopliae ARSEF 23] Length = 337 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 25/226 (11%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E+I YL+ GK +R + A L D ++ + +H A+LL DD+ D Sbjct: 38 EIIRAPFDYLLNLPGKDVRSKMISAFNEWLCIPADKLEVIKRIVMLLHNASLLIDDIQDS 97 Query: 88 SALRRGKVAARLVWGNQTSVLVGD---FLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 S LRRG + ++G ++ + FL Q + + K+ E + E Sbjct: 98 SKLRRGLPVSHHIFGVPQTINAANYAYFLAQQELPKLGDPKAFE-----------IYTEE 146 Query: 145 LRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 L L + +D+ TEE+Y ++ KT LF A+ + L + V Sbjct: 147 LLSLHRGQGMDIYWREASKCPTEEEYFSMVSHKTGGLFRLAIRLMQLASDKNWFVFHTRD 206 Query: 196 SYGMN--LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + LG+ FQ+ DD L+ + + K GED GK + P+I Sbjct: 207 FVPLVNVLGVIFQIRDDYLNLQSHAYTVNKGFGEDLTEGKYSFPII 252 >gi|62959223|gb|AAY23719.1| farnesyl diphosphate synthase [Prochlorococcus marinus str. SS2] Length = 145 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 8/132 (6%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLVACTLAEGELRQL 148 +RRGK + +G T+VL GD L + AF ++ + ++ + + AC + Sbjct: 12 MRRGKPTTHIAFGEATAVLAGDALHALAFGLLADERTHHDPFVRAEMTACLAKAAGPAGM 71 Query: 149 SLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 + + +D+ E +++ KT L +A +E+ +++ V R +L+ Y +L Sbjct: 72 AGGQMMDLVAEHSTFNLQTVTRLQQLKTGALIAACVEIGAILGRVAEEGRTSLRGYAHDL 131 Query: 202 GIAFQLVDDVLD 213 G+AFQ+ DD+LD Sbjct: 132 GLAFQIADDILD 143 >gi|313619081|gb|EFR90887.1| geranyltranstransferase [Listeria innocua FSL S4-378] Length = 188 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALRRG 93 Y + +GGKR+RPML AT L + A A+E IHT +L+H +DD RRG Sbjct: 38 YSVQAGGKRIRPMLVFATLQALNIEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRG 97 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 K ++G+ T++L GD LL+ AF ++ E Sbjct: 98 KWTNHKIYGDATAILAGDALLTLAFSILAE 127 >gi|312216572|emb|CBX96522.1| hypothetical protein [Leptosphaeria maculans] Length = 510 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 6/210 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL GK +R A L L + ++ + +HTA+LL DDV D S LRRG Sbjct: 200 YLYGHPGKDIRSQCIAAFNLWLHVPAERLEIITRVVGMLHTASLLVDDVEDSSLLRRGIP 259 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ +A ++ ++ + ++ + L G+ L +L Sbjct: 260 VAHSIFGIPQTINSANYVYFKALQHLLLMQNPKLVDIFTEELLNLHRGQGMDLYWRDSLT 319 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +E DYL ++ +KT LF A+++ + V + + +G+ FQ++DD L+ Sbjct: 320 CPSEADYLEMVGNKTGGLFRLAIKLMQAESAVDVDCTPLVST----IGLLFQILDDHLNL 375 Query: 215 RGEVNEMG-KNIGEDFRNGKPTLPVILAFQ 243 K + ED GK + PVI A + Sbjct: 376 SPTSGYTNLKGLCEDLTEGKFSFPVIHAIR 405 >gi|63103161|gb|AAY33486.1| putative farnesyl diphosphate synthase [Choristoneura fumiferana] Length = 428 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 44/277 (15%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDN------HV--LLACAIEFIH 75 +P+ ++L GK+ R + T+ MLE + +N H+ ++ E H Sbjct: 113 VPEASRWLAKLLQYNVPNGKKNRGLATVLAYKMLE-KPENLTPENVHLANVMGWCTEMFH 171 Query: 76 TATLLHDDVVDDSALRRGKVA--------------ARLVWGNQTSVLVGDFLLSQAFCMV 121 T LL +D+++ + +RRG A A LV S L F + V Sbjct: 172 THQLLLNDIMEGTEMRRGAPAWHRRPDVGLSSINDAILVQSAMYSTLKKHFHAKPYYKNV 231 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE---EDYLHVIKSKTAV-LFSAAL 177 IE ++ L+ C+ + + ++ + D+++ E YL + K KTA F + Sbjct: 232 IEMFNE------MLLKCSTGQFLEKAMAKTDKPDLSQFTMEKYLTIAKYKTAYHTFQMPV 285 Query: 178 EVSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++ L++GV + + RQA K+ + +G FQ+ DD LD G+ GKN G D ++GK T Sbjct: 286 GLALLMSGVDDLETHRQA-KTILLEMGQFFQIQDDFLDCFGDPAVTGKN-GSDIQDGKCT 343 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKIS-VENLKKAF 271 ++A QR + +++ + K VE +K+ + Sbjct: 344 WLAVVALQRASPAQRHVLEEHYGSSKPEDVEKIKELY 380 >gi|68489506|ref|XP_711426.1| hypothetical protein CaO19.6674 [Candida albicans SC5314] gi|46432727|gb|EAK92197.1| hypothetical protein CaO19.6674 [Candida albicans SC5314] gi|238882748|gb|EEQ46386.1| hypothetical protein CAWG_04735 [Candida albicans WO-1] Length = 332 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 20/208 (9%) Query: 57 LEYRGDNHVLLACAIEFI---HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113 L Y+ + LLA E I H ++LL DD+ DDS RRG A + +G T++ G+ + Sbjct: 51 LFYKISDESLLARISEIISVFHNSSLLIDDIEDDSKYRRGVPVAHVKYGIPTTINCGNLM 110 Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-------------TEED 160 A + + + + EL L + LD+ E+ Sbjct: 111 YFVALQQAQQLSGPHGSMEVKFKSSQILIDELLNLHRGQGLDIYWRDYLKKLEKLPDVEE 170 Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY-RGEVN 219 YL +IK KT LF A+++ SL + V+ + L S +GI +Q+ DD L+ + + Sbjct: 171 YLEMIKDKTGGLFRLAIKLLSLYSDVKEN--DQLISLANLMGILYQVRDDYLNLVDAKYS 228 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTK 247 M ED GK +LP IL R TK Sbjct: 229 AMKGTTCEDLIEGKLSLP-ILHCLRTTK 255 >gi|15618657|ref|NP_224943.1| geranyl transtransferase [Chlamydophila pneumoniae CWL029] gi|15836281|ref|NP_300805.1| geranyl transtransferase [Chlamydophila pneumoniae J138] gi|16752293|ref|NP_445662.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydophila pneumoniae AR39] gi|33242107|ref|NP_877048.1| geranylgeranyl pyrophosphate synthase [Chlamydophila pneumoniae TW-183] gi|4377054|gb|AAD18886.1| Geranyl Transtransferase [Chlamydophila pneumoniae CWL029] gi|7190037|gb|AAF38891.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydophila pneumoniae AR39] gi|8979121|dbj|BAA98956.1| geranyl transtransferase [Chlamydophila pneumoniae J138] gi|33236617|gb|AAP98705.1| geranylgeranyl pyrophosphate synthase [Chlamydophila pneumoniae TW-183] gi|269302537|gb|ACZ32637.1| polyprenyl synthetase [Chlamydophila pneumoniae LPCoLN] Length = 289 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 46/222 (20%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDV--VDDSA 89 V+Y + GGKRLRP L +M + G NH ++ A A+EF+HT+TL+ DD+ +D+ Sbjct: 34 VEYALQGGGKRLRPGLV---CMMAQGLGLNHDVMDSALAVEFVHTSTLIADDLPCMDNDD 90 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG--ELRQ 147 RRG+ + T++L L+ A+ L L A L E + R+ Sbjct: 91 ERRGRPTVHKAFDEATALLASYALIPAAY------------SHLRLNAKKLKEQGCDPRE 138 Query: 148 LSLSKNL--DVT-----------------------EEDYLHVIKSKTAVLFSAALEVSSL 182 + ++ N+ D+T +E ++ KT LF A L Sbjct: 139 IDIAYNIIGDITDKNIGCSGVLGGQYDDMFFSNRGQEHVQSIMIKKTGSLFEIACISGWL 198 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 G + S+ N G+ FQ+ DD D + + ++G N Sbjct: 199 FGGGDPQFAPIITSFSNNFGLLFQIKDDFSDLQKDSQQIGLN 240 >gi|254776305|ref|ZP_05217821.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291] Length = 369 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 92/230 (40%), Gaps = 30/230 (13%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 SGGK LR L R + A + E +H LL DDV+D + RRG+ AA L Sbjct: 64 SGGKCLRSTFVYLGWLCGAPRDRAALRAAASFELLHAFALLQDDVMDGAQERRGRPAAHL 123 Query: 100 V---W-------------GNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVAC 138 W G ++L+GD L A M+ ++ + Q A + Sbjct: 124 QFGRWHQDRGLSGSPRRFGESAAILLGDLCLIWAEQMLRDSGLEARRLQRAFPRYDAMRV 183 Query: 139 TLAEGELRQLS----LSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQA 193 LA G+ L+ S LD L V + K+ LE+ + +AG + Sbjct: 184 ELAVGQFADLTNDIRQSPGLDAV----LEVARRKSGNYTVRRPLEIGATMAGCDDRTVAR 239 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 L YG +G AFQL DDVL G GK D K T V+ A Q Sbjct: 240 LSRYGAAVGEAFQLRDDVLGVFGSPAVTGKPCAADLFERKATAVVVSAHQ 289 >gi|125583193|gb|EAZ24124.1| hypothetical protein OsJ_07863 [Oryza sativa Japonica Group] Length = 342 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 22/209 (10%) Query: 28 EMIPDVVKYLIFSGG------KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 E I ++Y + G KR P+L +A +L + V A A++ + L++ Sbjct: 67 ERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPREAPVPAALALQMVQAGWLVN 126 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALE------- 131 +D+ + RRG + + +G +VL GD L A+ VI + S E + Sbjct: 127 EDLPWFEAGPKRRGGPSNQAAYGTDMAVLAGDALFPLAYTHVIAQNPSPEPVPHAVLLRV 186 Query: 132 ----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A ++ + +A G+ L L+ + E + + V+ K + + +++ G Sbjct: 187 LGELARAVGSTGMAAGQF--LDLAGATALGEAEVMKVLTKKFGEMAECSAACGAMLGGAG 244 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 AL+ YG +G+ +QLVDD+ G Sbjct: 245 PDEEAALRRYGRTIGVLYQLVDDIRSASG 273 >gi|73654130|gb|AAZ79360.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-378] Length = 145 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 12/144 (8%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVA 137 HDD+ +DD LR GK + T+VL GD L + AF ++ + S + LVA Sbjct: 1 HDDLPWMDDDELRHGKPTLHRAFDEATAVLAGDCLHALAFDILTQPDTSTDPFTRAELVA 60 Query: 138 CTLAEGELRQ-LSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNS 189 TLA + ++ + +D+ E+ + ++ KT L +A++E+ +++ V Sbjct: 61 -TLARASGHEGMAGGQMMDIVSEEQAYDLRQVTRLQQLKTGALLAASVEMGAVLGRVPPE 119 Query: 190 VRQALKSYGMNLGIAFQLVDDVLD 213 R L++Y ++G+AFQ+ DD+LD Sbjct: 120 GRTHLRAYARDIGLAFQIADDILD 143 >gi|83774154|dbj|BAE64279.1| unnamed protein product [Aspergillus oryzae] Length = 700 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 23/190 (12%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H A+LL DD+ D S LRRG+ AA ++G ++ ++LL QA V + +Q ++ Sbjct: 451 ETLHNASLLLDDIEDSSPLRRGQPAAHTIFGQGQTINSANYLLIQAMHQVRQLDNQRCMD 510 Query: 132 ALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSL 182 E+R L + ++ D+ ++++YL +I + LF + + Sbjct: 511 VFV--------EEMRNLFIGQSFDLYWTRQGECPSQDEYLEMISQ--SGLFRLLTRLMTE 560 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 A Q++ L S LG FQ+ DD + E + K ED GK + P++ A Sbjct: 561 KASTQHNSTITLDSLVSLLGQYFQIRDDYKNLT-EDYAIQKGFCEDLDEGKYSFPLVHAL 619 Query: 243 QRGTKREKNF 252 T + +NF Sbjct: 620 ---TTQPRNF 626 >gi|330796722|ref|XP_003286414.1| polyprenyl synthetase [Dictyostelium purpureum] gi|325083609|gb|EGC37057.1| polyprenyl synthetase [Dictyostelium purpureum] Length = 298 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 8/224 (3%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDD 83 SD++++ + Y+ S GK R L + L+ GD V ++ ++ +H ++LL DD Sbjct: 10 SDLQLL-EPYSYICESSGKGFRNTLIKSFDFWLKV-GDERVKDISQVVQGLHVSSLLIDD 67 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 + D+S LRRGK A ++G ++ +F+ F S EA L G Sbjct: 68 IEDNSKLRRGKPVAHSIYGIPQTINSANFVYFLIFNDCNRLGSPEATSIFIEEVIRLHRG 127 Query: 144 ELRQ-LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + L N +E++Y+ ++ KT LF L + + + + + ++ +LG Sbjct: 128 QGYDILWRDTNKSPSEQEYMKMVNEKTGGLFRLGLRLLQCFSENKTNYIELVE----DLG 183 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +Q+ DD+++ E K+ ED GK + P+I A T Sbjct: 184 MYYQIRDDLINLDSEDYHQNKSFCEDISEGKFSFPIIHAINADT 227 >gi|254581250|ref|XP_002496610.1| ZYRO0D04070p [Zygosaccharomyces rouxii] gi|238939502|emb|CAR27677.1| ZYRO0D04070p [Zygosaccharomyces rouxii] Length = 322 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/301 (22%), Positives = 126/301 (41%), Gaps = 22/301 (7%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GK R L + + + ++ + +H A+LL DD+ D SA RRG Sbjct: 28 YIVSKPGKSFRSKLINVFNEIYQIPIEKTNQISTLVAILHNASLLIDDIEDSSATRRGIP 87 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 + ++G ++ +++ +A ++ + + L+ + E+ L + LD Sbjct: 88 TSHTLFGVPLTINAANYMYFKAMEILQTISGDDKILLHDLMV--IFNQEMINLHRGQGLD 145 Query: 156 V-----------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + E Y +++ +KT LF + + L+ V+ + +L LGI Sbjct: 146 IYWRDNLLQFIPDEATYYNMVMNKTGGLFRLTVRIMELLTDVE--LPHSLVPLSNLLGII 203 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264 +Q+ DD + E K + ED GK + P+I + G + + + + V Sbjct: 204 YQIRDDYQNLSNEQMIANKGLAEDISEGKLSFPIIHGLKYGQSQNETILQDVLRLRTDDV 263 Query: 265 ENLKKAF-IIMRENRALVDTEYRAYSYGQKAKD----SLRCLPDSSWKKSLMEVVDFCLQ 319 E K+A + E+ +L T + + AK + PD+S K LM VVD+ Sbjct: 264 ELKKRALDYLNNESHSLEYTWEKLEELSKLAKSENYIPRKNFPDASNK--LMSVVDYLST 321 Query: 320 R 320 R Sbjct: 322 R 322 >gi|118465792|ref|YP_883046.1| polyprenyl synthetase [Mycobacterium avium 104] gi|118167079|gb|ABK67976.1| polyprenyl synthetase [Mycobacterium avium 104] Length = 392 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 92/230 (40%), Gaps = 30/230 (13%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 SGGK LR L R + A + E +H LL DDV+D + RRG+ AA L Sbjct: 87 SGGKCLRSTFVYLGWLCGAPRDRAALRAAASFELLHAFALLQDDVMDGAQERRGRPAAHL 146 Query: 100 V---W-------------GNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVAC 138 W G ++L+GD L A M+ ++ + Q A + Sbjct: 147 QFGRWHQDRGLSGSPRRFGESAAILLGDLCLIWAEQMLRDSGLEARRLQRAFPRYDAMRV 206 Query: 139 TLAEGELRQLS----LSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQA 193 LA G+ L+ S LD L V + K+ LE+ + +AG + Sbjct: 207 ELAVGQFADLTNDIRQSPGLDAV----LEVARRKSGNYTVRRPLEIGATMAGCDDRTVAR 262 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 L YG +G AFQL DDVL G GK D K T V+ A Q Sbjct: 263 LSRYGAAVGEAFQLRDDVLGVFGSPAVTGKPCAADLFERKATAVVVSAHQ 312 >gi|183233717|ref|XP_001913900.1| bifunctional short chain isoprenyl diphosphate synthase [Entamoeba histolytica HM-1:IMSS] gi|169801440|gb|EDS89325.1| bifunctional short chain isoprenyl diphosphate synthase, putative [Entamoeba histolytica HM-1:IMSS] Length = 326 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 134/311 (43%), Gaps = 78/311 (25%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG--------DNHVLLACAIEFIHTATLLHDD 83 D+++ + GKRLRP+ +L+L + G N + ACA+E +H +TL HDD Sbjct: 34 DIMEKFVMGPGKRLRPL-----SLLLFFIGGGGKIEEQKNIIRTACAMELLHDSTLAHDD 88 Query: 84 VVDDSALRRGK--------------------------VAARLVWGNQTSVLVGDFLLSQA 117 ++D+ +RR ++ + + +++ G+ L S A Sbjct: 89 IMDEDEMRRNAPTIVKTFYDKYIERNKEDVKTEKFLFMSRGTTYASSLAIMTGNILYSMA 148 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + +E+ + A L L + L G++ +S L+ EE L++I KTA+ F Sbjct: 149 QRLCLESGTNIAEMVLELFSV-LNYGQILDMS---GLNTVEEYNLNII-MKTAIFFKTT- 202 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 S G+ L DD+LD +N + +G D + GK T Sbjct: 203 -----------------ASIGLTLA-----EDDLLDI-DPLNGKLRKMGNDIKEGKKTAV 239 Query: 238 VILAFQRG--TKREKNFWKSTINDGKISVENLKKAF-----IIMRENRALVDTEYRAYSY 290 V A + G +K EK F + + + + +N ++AF I+ + +V E + + Sbjct: 240 VWTALKEGVLSKEEKEFVEGILKLNEKAFDN-QEAFTKFLNILRGKPSEVVRQEIKGHH- 297 Query: 291 GQKAKDSLRCL 301 QKA D+L+ L Sbjct: 298 -QKALDALKQL 307 >gi|41409167|ref|NP_962003.1| IdsA2_2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397987|gb|AAS05617.1| IdsA2_2 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 382 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 92/230 (40%), Gaps = 30/230 (13%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 SGGK LR L R + A + E +H LL DDV+D + RRG+ AA L Sbjct: 77 SGGKCLRSTFVYLGWLCGAPRDRAALRAAASFELLHAFALLQDDVMDGAQERRGRPAAHL 136 Query: 100 V---W-------------GNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVAC 138 W G ++L+GD L A M+ ++ + Q A + Sbjct: 137 QFGRWHQDRGLSGSPRRFGESAAILLGDLCLIWAEQMLRDSGLEARRLQRAWPRYDAMRV 196 Query: 139 TLAEGELRQLS----LSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQA 193 LA G+ L+ S LD L V + K+ LE+ + +AG + Sbjct: 197 ELAVGQFADLTNDIRQSPGLDAV----LEVARRKSGNYTVRRPLEIGATMAGCDDRTVAR 252 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 L YG +G AFQL DDVL G GK D K T V+ A Q Sbjct: 253 LSRYGAAVGEAFQLRDDVLGVFGSPAVTGKPCAADLFERKATAVVVSAHQ 302 >gi|145641599|ref|ZP_01797176.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae R3021] gi|145273646|gb|EDK13515.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 22.4-21] Length = 144 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Query: 148 LSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSYGMNLGIAF 205 +S K + ++E + +H ++KT L AAL++ + + + Q+L Y +G+AF Sbjct: 10 ISEHKQISLSELELIH--RNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAF 67 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 Q+ DD+LD G+ E+GK +G D K T P +L ++ ++ ++S +++ Sbjct: 68 QVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSE 121 >gi|238062098|ref|ZP_04606807.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149] gi|237883909|gb|EEP72737.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149] Length = 384 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 108/256 (42%), Gaps = 60/256 (23%) Query: 38 IFSGGKRLRPMLTLATALMLEYRG--------DNHVLLACAIEFIHTATLLHDDVVDDSA 89 + +GGKR+RP +RG + A+E +HT L+HDDV+D S Sbjct: 73 VLAGGKRVRPTFA-----YWGWRGAAGGAEPLPAVLPALAALELLHTFALVHDDVMDASD 127 Query: 90 LRRGKVAARLV----------------WGNQTSVLVGDFLLSQAFCMVIETK--SQEALE 131 RRG+ A +G +VL+GD CMV + + + Sbjct: 128 TRRGRPTAHRAAAARHAAAGHTGDPERFGEAVAVLIGDL------CMVWADRLLAHATVP 181 Query: 132 ALSLVACTLAEGELRQLSLSKN-LDVTEED---------YLHVIKSKTA-------VLFS 174 L+ ++R +++ LD+ E+ L V + KTA +LF Sbjct: 182 PARLLDVRRCYDQMRVETVAGQYLDILGENDAGNWSLDRALRVARYKTASYTVQRPLLFG 241 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A L + + A YG+ +G AFQL DD+L G+ GK G+D R GKP Sbjct: 242 ALLAGAD----ADAPLTAAYTRYGLAVGEAFQLRDDLLGVYGDPATTGKPAGDDLRTGKP 297 Query: 235 TLPVILA--FQRGTKR 248 T ++LA F GT+R Sbjct: 298 TALLVLARQFATGTQR 313 >gi|317137331|ref|XP_001727659.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40] Length = 371 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 18/179 (10%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H ++L+ DD+ D+S LRRGK A +++G ++ + L F V S E E Sbjct: 120 LHQSSLMFDDLEDESQLRRGKPATHMLYGPAQTINSAVYALVNTFSEVQRLDSSETTEIF 179 Query: 134 SLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIA 184 EL+ L ++ D+ T E+Y+ +I KT LF + + Sbjct: 180 I--------DELQNLHCGQSFDLYWKYHGHIPTVEEYMMMIDHKTGGLFRLCVRLMQ-AK 230 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + L + LG FQ+ DD + E K EDF GK +LP+I Q Sbjct: 231 SISSGPHLELTHFVSLLGRFFQIRDDYQNLMSEEYSHQKGFCEDFDEGKISLPLIYYMQ 289 >gi|297528712|ref|YP_003669987.1| polyprenyl synthetase [Geobacillus sp. C56-T3] gi|297251964|gb|ADI25410.1| Polyprenyl synthetase [Geobacillus sp. C56-T3] Length = 279 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 21/201 (10%) Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +GD+ +A AIE I A L DD+VD + + +G LL+Q Sbjct: 39 QGDHSTYIAAAIELIVLAGDLLDDIVDQDRFEDTAIPLHIA--------IGFLLLAQQAI 90 Query: 120 MVIETKSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 + S + L+ALS V +C L +Q ++ ++ TE DYL +++ K L + A Sbjct: 91 ANVPISSNKKLKALSYVTSCLLQSVHGQQTDVACDVQ-TEADYLKMVEKKAGSLVAMACV 149 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + +L+AG ++ A+++Y +GIA Q +D+ LD ++ D + K LP+ Sbjct: 150 IGALLAGKEDIA--AIETYARYIGIAAQ-IDNDLDALYNWDKKA-----DIQAKKKLLPI 201 Query: 239 ILAFQRGTKREKNFWKSTIND 259 + + ++ N WK N+ Sbjct: 202 LYMLES---KQNNLWKQYFNN 219 >gi|134057781|emb|CAK38176.1| unnamed protein product [Aspergillus niger] Length = 434 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 I +TL+ DD+ DDS LRRGK AA +V+G +V +L + K+ L+ L Sbjct: 187 IFHSTLMIDDIEDDSMLRRGKPAAHVVFGKAQTVNSATYLYA---------KATRDLDQL 237 Query: 134 SLVACTLAE-GELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLI 183 AC A EL L+L + LD+ T +YL ++ +KT LF L + + Sbjct: 238 QQDACKAAFLEELETLALGQALDLHWKFQKTCPTTGEYLTMVDNKTGGLFRMTLRLLEIE 297 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + L +G +Q+ DD L+ + K ED GK + P+I A Q Sbjct: 298 SKAEPC--PDLMQLITLMGRYYQIRDDYLNLTSDEYTGTKGYCEDLSEGKLSFPLIYALQ 355 Query: 244 RGTK 247 + + Sbjct: 356 KSPE 359 >gi|58271236|ref|XP_572774.1| farnesyltranstransferase [Cryptococcus neoformans var. neoformans JEC21] gi|134114510|ref|XP_774085.1| hypothetical protein CNBH0100 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256717|gb|EAL19438.1| hypothetical protein CNBH0100 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229033|gb|AAW45467.1| farnesyltranstransferase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 322 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 21/225 (9%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ + GK +R L A LE D+ ++ + +H A+LL DDV D+S LRRG Sbjct: 29 YISQNPGKEIRSKLIDAFNQWLEVDKDDLKVITKVVRMLHNASLLMDDVEDNSELRRGLP 88 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVACTLAEGELRQLSLS 151 A ++G ++ +++ AF +++ +S + + + LVA EL QL Sbjct: 89 VAHTIYGVPQTINAANYVYFLAFQELLQLRSGVMGKGKDKEVDLVAA--VNEELLQLHRG 146 Query: 152 KNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL- 201 + +D+ TE++Y+ ++ K L A+++ ++A ++V +NL Sbjct: 147 QGMDLFWRDSLTCPTEKEYIDMVLGKAGGLLRLAVKL--MMAKSDSNVDYVPL---VNLI 201 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + FQ+ DD ++ + + K ED GK + PV+ + T Sbjct: 202 SVWFQIRDDYMNLQSPAYKSNKGFCEDLTEGKFSFPVVHGVRADT 246 >gi|289613364|emb|CBI59673.1| unnamed protein product [Sordaria macrospora] Length = 746 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 23/188 (12%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 ++ +HTA+L+ DDV D S LRRG AA V+G ++ + + I Q+A Sbjct: 492 VDDLHTASLMFDDVEDGSELRRGNPAAHAVYGIPQTI--------NSASLAILEAVQKAK 543 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSS 181 + A +A +LR L + ++ D+ +E +YL ++ KT LF L +S Sbjct: 544 DLPIPGAVDIALEQLRDLHVGQSYDLYWTRHMTCPSESEYLEMVAKKTGGLF---LLLSR 600 Query: 182 LIA-GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI- 239 L++ + VR + +GI FQ+ DD + + K ED GK + P++ Sbjct: 601 LMSEHMPKEVRSLVNDLVTQVGIYFQIRDDYQNLSSDEYTAQKGFCEDLDEGKLSFPLVH 660 Query: 240 -LAFQRGT 246 L +RG+ Sbjct: 661 YLNTERGS 668 >gi|269794899|ref|YP_003314354.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM 10542] gi|269097084|gb|ACZ21520.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM 10542] Length = 369 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 120/301 (39%), Gaps = 37/301 (12%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLT-----LATALMLEYRGDNHVLLACAIEF 73 +L I D + + D ++ GGKRLR + V + A+E Sbjct: 32 VLAGISGDADPLADAWSQML-RGGKRLRAAFAYWSWRAHGGAPGGAEAASIVGVGAALEL 90 Query: 74 IHTATLLHDDVVDDSALRRG------KVAAR---LVW-------GNQTSVLVGDFLL--- 114 A L HDDV+D S RRG AAR W G ++L+GD L Sbjct: 91 FQAAALFHDDVMDRSDTRRGVPTAHRTFAARHRDAGWSGDADQFGLSAAILLGDLSLVAS 150 Query: 115 -SQAFCMVIETKSQEALEALSLVACTLAEGELRQ--------LSLSKNLDVTEEDYLHVI 165 + V + + A SL E + Q L + + D E V+ Sbjct: 151 EDEFLRAVRDVPAAAVAPARSLFTQMRTEVTVGQYLDMHAQMLPWTDDFDADERRAREVV 210 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 +SK+A +S ++ A Q ++G+ LG AFQL DD+L G+ GK Sbjct: 211 RSKSA-RYSVESPIAIGAALAGADAEQLATCSAFGLPLGEAFQLRDDLLGAFGDPEATGK 269 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283 G+D R GK TL V+ A + E+ S + ++ +++K +RE A+ + Sbjct: 270 PAGDDLREGKRTLLVVRAMRALGPVERAELASRLGAPDLTASDVEKMQRTIRETGAVDEV 329 Query: 284 E 284 E Sbjct: 330 E 330 >gi|62959225|gb|AAY23720.1| farnesyl diphosphate synthase [Prochlorococcus marinus str. CCMP1377] Length = 145 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 8/131 (6%) Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLVACTLAEGELRQLS 149 RRGK + +G T+VL GD L + AF ++ + ++ + + AC ++ Sbjct: 13 RRGKPTTHIAFGEATAVLAGDALHALAFGLLADERTHHDPFVRAEMTACLAKAAGPAGMA 72 Query: 150 LSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG 202 + +D+ E +++ KT L +A +E+ +++ V R +L+ Y +LG Sbjct: 73 GGQMMDLVAEHSTFNLQTVTRLQQLKTGALIAACVEIGAILGRVAEEGRTSLRGYAHDLG 132 Query: 203 IAFQLVDDVLD 213 +AFQ+ DD+LD Sbjct: 133 LAFQIADDILD 143 >gi|83770687|dbj|BAE60820.1| unnamed protein product [Aspergillus oryzae] Length = 362 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 18/179 (10%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H ++L+ DD+ D+S LRRGK A +++G ++ + L F V S E E Sbjct: 111 LHQSSLMFDDLEDESQLRRGKPATHMLYGPAQTINSAVYALVNTFSEVQRLDSSETTEIF 170 Query: 134 SLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIA 184 EL+ L ++ D+ T E+Y+ +I KT LF + + Sbjct: 171 I--------DELQNLHCGQSFDLYWKYHGHIPTVEEYMMMIDHKTGGLFRLCVRLMQ-AK 221 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + L + LG FQ+ DD + E K EDF GK +LP+I Q Sbjct: 222 SISSGPHLELTHFVSLLGRFFQIRDDYQNLMSEEYSHQKGFCEDFDEGKISLPLIYYMQ 280 >gi|118088191|ref|XP_424685.2| PREDICTED: similar to geranylgeranyl diphosphate synthase [Gallus gallus] Length = 420 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 21/209 (10%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK++R L+ A L D ++ E +H A+LL DD+ D+S LRRG A ++ Sbjct: 144 GKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDIEDNSKLRRGFPVAHSIY 203 Query: 102 GNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV----- 156 G + + +++ V+ +A++ + +L +L + LD+ Sbjct: 204 GIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTR--------QLLELHKGQGLDIYWRDT 255 Query: 157 ----TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 TE +Y ++ KT LF A+ + L + + ++ L + LG+ FQ+ DD Sbjct: 256 YTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNT----LGLFFQIRDDYA 311 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + K+ ED GK + P I A Sbjct: 312 NLHSKEYSENKSFCEDLTEGKFSFPTIHA 340 >gi|317028454|ref|XP_001390105.2| hypothetical protein ANI_1_1118034 [Aspergillus niger CBS 513.88] Length = 569 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 I +TL+ DD+ DDS LRRGK AA +V+G +V +L + K+ L+ L Sbjct: 322 IFHSTLMIDDIEDDSMLRRGKPAAHVVFGKAQTVNSATYLYA---------KATRDLDQL 372 Query: 134 SLVACTLAE-GELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLI 183 AC A EL L+L + LD+ T +YL ++ +KT LF L + + Sbjct: 373 QQDACKAAFLEELETLALGQALDLHWKFQKTCPTTGEYLTMVDNKTGGLFRMTLRLLEIE 432 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + L +G +Q+ DD L+ + K ED GK + P+I A Q Sbjct: 433 SKAEPC--PDLMQLITLMGRYYQIRDDYLNLTSDEYTGTKGYCEDLSEGKLSFPLIYALQ 490 Query: 244 RGTK 247 + + Sbjct: 491 KSPE 494 >gi|320012344|gb|ADW07194.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331] Length = 374 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 100/219 (45%), Gaps = 8/219 (3%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +R L + A D+ V A A+E +HT +LLHDD++D RR + + Sbjct: 85 GKGVRQALAVLCAEAAGAPPDSAVAAAVAVELVHTFSLLHDDIMDGDGTRRQRETVWKAY 144 Query: 102 GNQTSVLVGDFLLSQAFCMVIETK---SQEALEALSLVACTLAEGELRQLSLSKNL---- 154 G +VL GD LL+ A + E + A+ LS LA G+ L L+ Sbjct: 145 GTGPAVLAGDALLALAVQTLAEAPGPLTAVAVGRLSETLSGLARGQAEDLLLAARPWTGP 204 Query: 155 -DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 V ++Y + + KT L A + L+ G V AL G +LG+AFQ VDD+L Sbjct: 205 GAVRTDEYRAMAELKTGTLLGCAAALGGLLGGAPEPVVAALDRAGRHLGVAFQAVDDLLG 264 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 G+ GK + D R K T PV+ A R +R Sbjct: 265 IWGDPAVTGKPVHSDLRERKKTYPVLAALGRDDRRSAEL 303 >gi|50355631|dbj|BAD29970.1| geranylgeranyldiphosphate synthase [Phoma betae] Length = 343 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 5/205 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK +R +L L+ ++ ++ + +HTA+LL DD+ D+S LRRGK Sbjct: 62 YIAAKPGKEVRTLLLACFDEWLQVPPESLEVIGQVVRMLHTASLLIDDIQDNSELRRGKP 121 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A+ ++G ++ +++ A + K+ + + L G+ L L Sbjct: 122 VAQNIFGTALTINSANYVYFLALEKLNSLKNPNITDIFTEELLRLHRGQAMDLYWRDTLT 181 Query: 156 V-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 TEE+Y ++ + T LF + ++S+ L LG+ FQ++DD + Sbjct: 182 CPTEEEYFEMVANMTGGLFWLMYR----MMNAESSMPIDLLPVVELLGVIFQVLDDYKNL 237 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVI 239 K GED GK + PVI Sbjct: 238 CSREYGKLKGFGEDLTEGKFSFPVI 262 >gi|307324121|ref|ZP_07603330.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306890570|gb|EFN21547.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 378 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 8/178 (4%) Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 +HT +LLHDD++D RR + +G +VL GD L + A + A A Sbjct: 116 LVHTFSLLHDDIMDGDQTRRTRPTVWKAYGTGPAVLAGDALFALAVEALAAVPGAGAAAA 175 Query: 133 LSLVACTLAE---GELRQL-----SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 + ++ L + G+ L + V E+Y + + KT L A + + +A Sbjct: 176 VRRLSVALGDLVRGQADDLLFESRPWTGATAVGPEEYRRMAEHKTGALLGCAAALGAALA 235 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 G S AL G ++G+AFQ+ DD+L G+ GK + D R K T PV+ A Sbjct: 236 GAPESTAAALDRAGRHMGVAFQVADDLLGIWGDPAVTGKPVHRDLRQRKKTFPVLAAL 293 >gi|241955823|ref|XP_002420632.1| geranylgeranyl diphosphate synthase, putative; geranylgeranyl pyrophosphate synthetase, putative; [includes: dimethylallyltranstransferase (ec 2.5.1.1) geranyltranstransferase (ec 2.5.1.10); farnesyltranstransferas (ec 2.5.1.29)] [Candida dubliniensis CD36] gi|223643974|emb|CAX41714.1| geranylgeranyl diphosphate synthase, putative [Candida dubliniensis CD36] Length = 332 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 17/191 (8%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 I H ++LL DD+ DDS RRG A + +G +++ G+ + A + Sbjct: 68 ISVFHNSSLLIDDIEDDSKYRRGVPVAHVKYGIPSTLNCGNLMYFVALQQAQQLSGPHGS 127 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVLFSAAL 177 + + + EL L + LD+ E+YL +IK KT LF A+ Sbjct: 128 MEIKFKSSQILIDELLNLHRGQGLDIYWRDYLKKLEKLPDVEEYLEMIKDKTGGLFRLAI 187 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY-RGEVNEMGKNIGEDFRNGKPTL 236 ++ SL + ++ + L S +GI +Q+ DD L+ + + M I ED GK +L Sbjct: 188 KLLSLYSDIKEN--DQLISLANLMGILYQVRDDYLNLVDAKYSAMKGTICEDLIEGKLSL 245 Query: 237 PVILAFQRGTK 247 P IL R TK Sbjct: 246 P-ILHCLRTTK 255 >gi|227495526|ref|ZP_03925842.1| geranylgeranyl pyrophosphate synthase [Actinomyces coleocanis DSM 15436] gi|226831073|gb|EEH63456.1| geranylgeranyl pyrophosphate synthase [Actinomyces coleocanis DSM 15436] Length = 361 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 28/221 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRG----KVAAR----LVWGNQTSVLVGDFLLSQAF 118 L A+EF + L+HDD++DD LRR +VAAR + +VLVGD+LLS Sbjct: 85 LGVAMEFYQASALVHDDLIDDVDLRRSHATIQVAARQFLPADAADAAAVLVGDYLLSLNH 144 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 ++ + + +A G +++ + LD+ E H ++ TA L + L+ Sbjct: 145 AATNIALAEASAPLRDQIHAYMA-GITAEVAWGQYLDILTET--HSLE-DTAGLRAHVLD 200 Query: 179 VSSLIAGVQNSVRQ----------------ALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 V ++ +G + +R AL++ G GIAFQ+ DD + GE + G Sbjct: 201 VITVKSGYYSVMRPLVLGAISEGGSAELIAALETAGTAWGIAFQMRDDEIGMFGEESVTG 260 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 K + D GK T+ + L +R + +++ + + + +I+ Sbjct: 261 KPVSSDLAEGKRTILLSLVLERVSAQQRKVLLNALGNKEIT 301 >gi|308080718|ref|NP_001183942.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays] gi|148535925|gb|ABQ85649.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays] Length = 343 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 24/211 (11%) Query: 28 EMIPDVVKYLIFSGG------KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL- 80 E I ++Y + G KR P+L +A +L + A A+E +H A+L+ Sbjct: 66 ESIHYAMRYAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAALPAAAALEMLHAASLVL 125 Query: 81 -HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-ETKSQEALE----- 131 HDD+ D + RRG+ + +G +VL GD L A+ VI T S + + Sbjct: 126 VHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVISHTPSPDPVPHAVLL 185 Query: 132 ------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 A ++ + +A G+ L L+ + E + + V+ K + + +++ G Sbjct: 186 RVLAELARAVGSTGMAAGQF--LDLAGATALGEAEVMQVLTKKFGEMAECSAACGAMLGG 243 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 L+ YG +G+ ++LVDD+ G Sbjct: 244 AGPDEEAELRRYGRTIGVLYELVDDIRSASG 274 >gi|63022081|gb|AAY26575.1| putative farnesyl diphosphate synthase [Choristoneura fumiferana] Length = 428 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 44/277 (15%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDN------HV--LLACAIEFIH 75 +P+ ++L GK+ R + T+ MLE + +N H+ ++ E H Sbjct: 113 VPEASRWLAKLLQYNVPNGKKNRGLATVLAYKMLE-KPENLTPENVHLANVMGWCTEMFH 171 Query: 76 TATLLHDDVVDDSALRRGKVA--------------ARLVWGNQTSVLVGDFLLSQAFCMV 121 T LL +D+++ + +RRG A A LV S L F + V Sbjct: 172 THQLLLNDIMEGTEMRRGAPAWHRRPDVGLSSINDAILVQSAMYSTLKKHFHAKPYYKNV 231 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE---EDYLHVIKSKTAV-LFSAAL 177 IE ++ L+ C+ + + ++ + D+++ E YL + K KTA F + Sbjct: 232 IEMFNE------MLLKCSTGQFLEKAMAKTDKPDLSQFTMEKYLTIAKYKTAYHTFQMPV 285 Query: 178 EVSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 ++ L++GV + + RQA K+ + +G FQ+ DD LD G+ GKN G D ++GK T Sbjct: 286 GLALLMSGVDDLETHRQA-KTILLEMGQFFQIQDDFLDCFGDPAVTGKN-GSDIQDGKCT 343 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKIS-VENLKKAF 271 ++A QR + +++ K VE +K+ + Sbjct: 344 WLAVVALQRASPAQRHVLGEHYGSSKPEDVEKIKELY 380 >gi|8272414|dbj|BAA96459.1| farnesyl diphosphate synthase [Rhodovulum sulfidophilum] Length = 289 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 21/267 (7%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 + + ++Y + SGGKRLR L L +A + + + V A A+E +H +L+HDD+ Sbjct: 27 QPVTQAMRYAV-SGGKRLRGFLVLESAALYDIAPEAAVDAAAAVEALHAYSLVHDDMPCM 85 Query: 88 SA--LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEALSLVACTLAEGE 144 LRRG+ + W + T++L GD L + AF ++ + + LVA Sbjct: 86 DDDDLRRGQPTVHVKWDDGTALLTGDALQTLAFELLSAPACHPDPAVRIDLVASLARASG 145 Query: 145 LRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + + L + D+ E + + +KT L + E + +A + L Sbjct: 146 IDGMVLGQAQDIAAETAGRSLTLDEITELQANKTGALIRWSAEAGARLARADIA---PLT 202 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF--- 252 +Y LG+AFQ+ DD+LD G+ + GK + +D GK T +L R Sbjct: 203 AYSTALGLAFQIADDILDVEGDAAKTGKRVHKDAEAGKATFVSLLGLDGARARALALVEE 262 Query: 253 WKSTINDGKISVENLKKA--FIIMREN 277 ++ ++ + LK A F+I RE+ Sbjct: 263 AEAALDPFGGRADPLKAAARFVISRES 289 >gi|326781397|ref|ZP_08240662.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1] gi|326661730|gb|EGE46576.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1] Length = 351 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 20/237 (8%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW-------------GNQTSVL 108 D V A ++E IH A ++HDD++DDSALR G+ A + ++L Sbjct: 72 DALVRAAASLELIHAAAVVHDDLIDDSALRHGRPTAHIALRGAVRRRPRSVAAARSLAML 131 Query: 109 VGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163 VGD L+ A + + A +++ L GE ++ L + L Sbjct: 132 VGDLLMGMAGQLFTTSGLPAAYLGRARPLWTVLGRELIAGECLEI-LRTGAEPDTAASLK 190 Query: 164 VIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 VI+ KTA L + +AG + + +YG+ LG AFQL DD+L G+ G Sbjct: 191 VIRYKTAKYTVEQPLLIGGALAGAGARLCEGYSAYGLPLGEAFQLRDDLLGLFGDPGRTG 250 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279 K +D +PT + ++ +++ +S + + + L +MR +A Sbjct: 251 KANADDVCGHRPTALLAETWRVAGDDDRDRLRSLLGRRDLDEDGLNAVRAVMRRLKA 307 >gi|194747643|ref|XP_001956261.1| GF24684 [Drosophila ananassae] gi|190623543|gb|EDV39067.1| GF24684 [Drosophila ananassae] Length = 338 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 6/224 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ Y+ GK+ R L LA L + + ++ +H ++LL DD+ D+ Sbjct: 22 EILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLAQIGDIVQMLHNSSLLIDDIEDN 81 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ L A V + EA + + L G+ + Sbjct: 82 SILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGHPEATKVYTEQLLELHRGQGME 141 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + +E DY + KT LF A+ + L + S ++ LG+ FQ Sbjct: 142 IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS----SNKEDYSKLTAILGLYFQ 197 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD + + K+ ED GK PVI A R K++K Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV-RTQKQDK 240 >gi|67541280|ref|XP_664414.1| hypothetical protein AN6810.2 [Aspergillus nidulans FGSC A4] gi|40739019|gb|EAA58209.1| hypothetical protein AN6810.2 [Aspergillus nidulans FGSC A4] gi|259480406|tpe|CBF71507.1| TPA: ThiJ/PfpI family protein (AFU_orthologue; AFUA_3G01210) [Aspergillus nidulans FGSC A4] Length = 933 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 20/184 (10%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H A+L+ DD+ D S LRRG+ A ++G + ++ ++LL A + + AL Sbjct: 405 LHNASLMLDDIEDHSPLRRGRPATHTIFGAEQTINSANYLLIDAM---------QKVRAL 455 Query: 134 SLVAC-TLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLI 183 C + E+ L + ++ D+ +E++YL +++ KT+ LF + + I Sbjct: 456 DDPVCLDIYLEEMHNLFVGQSFDLYWTRQGQCPSEDEYLAMVRLKTSGLFRLLTRLMAQI 515 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A VQ + + L + +LG FQ+ DD + E K ED K + P+I A Sbjct: 516 APVQRGLDRRLSNLSDSLGEFFQIRDDYKNLSSEYTGQ-KGFCEDLDECKFSFPLIHALN 574 Query: 244 RGTK 247 K Sbjct: 575 TQPK 578 >gi|296129905|ref|YP_003637155.1| Polyprenyl synthetase [Cellulomonas flavigena DSM 20109] gi|296021720|gb|ADG74956.1| Polyprenyl synthetase [Cellulomonas flavigena DSM 20109] Length = 372 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 112/254 (44%), Gaps = 44/254 (17%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR------GDNH---VLLA-CA 70 +RI + + D V+ ++ +GGKRLR A +R GD VL A A Sbjct: 34 ERISPEAGALVDAVERMV-AGGKRLR-----AAFCYWSWRAHGGTPGDGREQGVLRAGAA 87 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVW----------------GNQTSVLVGDFLL 114 +E A L HDDV+DDS+ RRG A V+ G+ ++L+GD L Sbjct: 88 LELFQAAALFHDDVMDDSSTRRGLPTAHRVFADEHAGSGRRGEPRRFGDGVAILLGDLAL 147 Query: 115 -------SQAFCMVIETKSQEALEALSLVACTLAEGE----LRQLSLSKNLDVTEEDYLH 163 ++A + + +Q A S + + G+ + Q D E Sbjct: 148 IASDEEMTRALAGLPVSVAQAAHSVFSSMRTEVTVGQYLDLVAQTMPWGTADDDERRARE 207 Query: 164 VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 V+++K+A + + + +AG ++ ++ G+ LG AFQL DD+L G+ G Sbjct: 208 VVRAKSARYSVEHPIVLGAALAGADDAAVAGCRAVGLPLGEAFQLRDDLLGVLGDPATTG 267 Query: 223 KNIGEDFRNGKPTL 236 K G+D R GK T+ Sbjct: 268 KPAGDDLREGKRTV 281 >gi|320531404|ref|ZP_08032371.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337] gi|320136376|gb|EFW28357.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337] Length = 386 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 65/282 (23%), Positives = 109/282 (38%), Gaps = 50/282 (17%) Query: 38 IFSGGKRLRPMLTLATALML---EYR-----GDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + SGGKR+R +L +L E R G + V L A+E + L+HDD++D + Sbjct: 47 VLSGGKRMRAVLGAIGCAILSAPEQRAECLTGSDAVHLGAALELYQASALVHDDLMDGAD 106 Query: 90 LRRGKVAARLV---------WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC-- 138 RRG AA W + + + ++ + + + S V+C Sbjct: 107 TRRGMPAAHRAFTRDHEARGWLGRPQTFGANGAILLGDLLLSLAGEEMSALSQSRVSCET 166 Query: 139 ---------TLAEGELRQLSLSKNLDVTEE-------------------DYLHVIKSKTA 170 T + +++L + LDV E D L V++ K A Sbjct: 167 GSRTVQYARTAFDAMTTEVALGQFLDVRSENLPLPWDREPGAAARRMHDDALSVVRHKAA 226 Query: 171 ---VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 V + + L ++G ++GIAFQL DD L G GK G+ Sbjct: 227 RYSVRHPLLIGALLAGLDPSGPTAEHLAAFGEDVGIAFQLRDDELGVFGSPQATGKPAGD 286 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D R GK T+ + L + R + S + + + + E + + Sbjct: 287 DLREGKRTVLLALTWGRCGDAGRRLLGSVLANPEATPEQIGE 328 >gi|195428727|ref|XP_002062417.1| GK17525 [Drosophila willistoni] gi|194158502|gb|EDW73403.1| GK17525 [Drosophila willistoni] Length = 361 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 6/224 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ Y+ GK+ R L LA L + + ++ +H ++LL DD+ D+ Sbjct: 22 EILLQPFSYIQEIPGKQFRSELALAFNHWLLIPAEMLTQIGDIVQMLHNSSLLIDDIEDN 81 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ L A V + EA + L G+ + Sbjct: 82 SILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGHPEATRVYTEQLLELHRGQGME 141 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + +E DY + KT LF A+ + L + S ++ LG+ FQ Sbjct: 142 IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS----SNKEDYSKLTAILGLYFQ 197 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD + + K+ ED GK PVI A R K++K Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV-RSQKQDK 240 >gi|326508604|dbj|BAJ95824.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 350 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 28/256 (10%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +L IEF+ L+ DD++D S RRG+ W + D+LL ++ +I K Sbjct: 78 VLGWCIEFLQAFFLIADDIMDASVTRRGQ-PCWYKWNDVKMTACNDYLLVESQIYIILKK 136 Query: 126 ------SQEALEALSLVACTLAEGELRQL-SLSKNLD-----------VTEEDYLHVIKS 167 +E V+ G+L L SL N+D T E Y ++K Sbjct: 137 YFNNDLYVPLVELFHQVSYMTELGQLHDLRSLPPNVDKNSSDEIPFHTFTIETYSLIVKY 196 Query: 168 KTAVL-FSAALEVSSLIAG-VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA F L +++G + ++R+ + +G FQ+ DD LD G+ +GK I Sbjct: 197 KTAFYSFYLPLYCGLILSGKLDENIRKQTLDISIAMGEYFQIQDDYLDCYGDPEHIGK-I 255 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 G D + K + V+ A + ++ + KS N GK E +K I++E A ++ E Sbjct: 256 GRDIEDCKCSWMVVNALKLASEEQLAVLKS--NYGKEEPEKVK----IVKELYAQLNLEQ 309 Query: 286 RAYSYGQKAKDSLRCL 301 Y + A +S+ L Sbjct: 310 LYKDYEKSAIESMNQL 325 >gi|108800235|ref|YP_640432.1| polyprenyl synthetase [Mycobacterium sp. MCS] gi|119869363|ref|YP_939315.1| polyprenyl synthetase [Mycobacterium sp. KMS] gi|126435858|ref|YP_001071549.1| polyprenyl synthetase [Mycobacterium sp. JLS] gi|108770654|gb|ABG09376.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. MCS] gi|119695452|gb|ABL92525.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. KMS] gi|126235658|gb|ABN99058.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. JLS] Length = 359 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 102/240 (42%), Gaps = 28/240 (11%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLLACAIEFI-HTATLL 80 I SD + ++ + GGKRLRP + R D+ VLL + + H L+ Sbjct: 33 IGSDYAELTAALEEFVLRGGKRLRPAFAYWGWRAVADRPADSGVLLLFSALELLHACALV 92 Query: 81 HDDVVDDSALRRG-KVAARLV--------W-------GNQTSVLVGDFLLSQAFCMVIET 124 HDDV+D SA RRG RL W G ++L GD L A +V Sbjct: 93 HDDVIDASATRRGLPTVHRLFADRHADRGWHGSSEQFGLSAAILAGDLSLVWADDIVASV 152 Query: 125 KSQEALEALSLVACTLAE-------GELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAA 176 L+A V A+ G+ ++ + T + V KTA S Sbjct: 153 DLP--LDAHRRVQRVWADIRTEVLGGQFLDIAAEASGAQTVASAMTVNTYKTASYTVSRP 210 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 L++ + A + V + G ++G+AFQL DDVL G+ GK G+D R+GK T+ Sbjct: 211 LQLGAAAAADRPEVLEIFHQLGTDIGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTV 270 >gi|182440724|ref|YP_001828443.1| putative polyprenyl synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178469240|dbj|BAG23760.1| putative polyprenyl synthetase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 351 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 20/233 (8%) Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW-------------GNQTSVL 108 D V A ++E IH A ++HDD++DDSALR G+ A + ++L Sbjct: 72 DALVRAAASLELIHAAAVVHDDLIDDSALRHGRPTAHIALRGAVRRRPRSVAAARSLAML 131 Query: 109 VGDFLLSQAFCMVIETKSQEAL-----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163 VGD L+ A + + A +++ L GE ++ L + L Sbjct: 132 VGDLLMGMAGQLFTTSGLPAAYLGRARPLWTVLGRELIAGECLEI-LRTGAEPDTAASLK 190 Query: 164 VIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 VI+ KTA L + +AG + + +YG+ LG AFQL DD+L G+ G Sbjct: 191 VIRYKTAKYTVEQPLLIGGALAGAGARLCEGYSAYGLPLGEAFQLRDDLLGLFGDPGRTG 250 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 K +D +PT + ++ +++ +S + + + L +MR Sbjct: 251 KANADDVCGHRPTALLAETWRVAGDDDRDRLRSLLGRRDLDEDGLNAVRAVMR 303 >gi|290955133|ref|YP_003486315.1| geranylgeranyl pyrophosphate synthase [Streptomyces scabiei 87.22] gi|260644659|emb|CBG67744.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces scabiei 87.22] Length = 452 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 96/240 (40%), Gaps = 47/240 (19%) Query: 32 DVVKYLIFSGGKRLRPML---TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDS 88 D V GGK +RP L + + + A+E I T L+HDDV+D S Sbjct: 104 DRVARFALDGGKLMRPRFVWWALRACGGGAAETEAALRVGAALELIQTCALVHDDVMDAS 163 Query: 89 ALRRGK------VAARLV----------WGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 LRRG+ +AA+ +G ++L GD L+ A +V T + + Sbjct: 164 RLRRGRLALHADIAAQYAGGTAPADGARFGEAAAILAGDLALAWADDIVAATLTTPDTDR 223 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVR 191 +R+L ++ YL + T+ + A+ + L + + + R Sbjct: 224 -----------AVRELWSVMRTEMVAGQYLDIQGQATSSRSLARAIRAACLKSALYSVER 272 Query: 192 ----------------QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 +AL S G +GIAFQL DD+ D G GK G D R GKPT Sbjct: 273 PLALGAALAGADAARTRALCSAGRCVGIAFQLRDDLGDVFGGPRHSGKPTGGDIRAGKPT 332 >gi|84500607|ref|ZP_00998856.1| farnesyl diphosphate synthase [Oceanicola batsensis HTCC2597] gi|84391560|gb|EAQ03892.1| farnesyl diphosphate synthase [Oceanicola batsensis HTCC2597] Length = 286 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 34/261 (13%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAA 97 SGGKRLR L A + + A AIE +H +L+HDD+ LRRG+ Sbjct: 37 SGGKRLRAFLVCEGAALHGVAPGPALDAAAAIEAMHAYSLVHDDLPAMDDDDLRRGQPTV 96 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-----LSLSK 152 + W T++LVGD L S AF ++ S AL A +V TL G R + + Sbjct: 97 HVKWNEATAILVGDALQSLAFDLL----SHAALPADRVV--TLTAGMARAAGGMGMVHGQ 150 Query: 153 NLDVTEEDYLHVIK---------SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 LD+ E + KT L + + ++A ++ + +Y LG+ Sbjct: 151 ALDIAAETAPEPLSLPQITELQARKTGALIEWSAQAGPIMA---DADPGPMGAYARALGL 207 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 AFQ+ DD+LD G+ E GK + +D GK T ++ G K E T + +S Sbjct: 208 AFQIADDILDVEGDEAETGKRLRKDTAAGKATFVSLMGLD-GAKAEAGRLVETACE-ALS 265 Query: 264 V-----ENLKKA--FIIMREN 277 V + L++A F+I R++ Sbjct: 266 VYGERADGLREAARFVISRQS 286 >gi|119167462|gb|AAY33489.2| putative mitochondrial isoprenyl diphosphate synthase precursor [Megoura viciae] Length = 394 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 38/253 (15%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHT 76 +PDV K+L GGK+ R + + + ML D +L +E + Sbjct: 78 VPDVTKWLAKMLQYNVPGGKKNRGLALVLSFKMLASPADQTDENLRLSYILGWCVEILQA 137 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEA--- 129 L+ DD++D++ RRG R W + V D LL Q +I+ ++ Sbjct: 138 YQLVLDDIMDNAITRRG----RPCWYRHNDIGLMAVNDGILLEQTIYQLIKMYFKDKPYY 193 Query: 130 ---LEALSLVACTLAEGE-LRQLSL----SKNLD-VTEEDYLHVIKSKTAVL-FSAALEV 179 LE VA A G+ L L+ SK L+ T E+Y ++K KTA F + + Sbjct: 194 THILELFYDVAMKTAMGQCLDMLAANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVCL 253 Query: 180 SSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + + + RQA K+ + +G FQ+ DD LD G+ + MGK IG D +GK + Sbjct: 254 AMRMTNINDPEIFRQA-KTILLEMGHFFQVQDDFLDCYGDPDVMGK-IGTDIEDGKCSWL 311 Query: 238 VILAFQRGTKREK 250 ++A Q+ +K Sbjct: 312 AVVALQKVNSEQK 324 >gi|149915300|ref|ZP_01903828.1| lipoyl synthase [Roseobacter sp. AzwK-3b] gi|149811021|gb|EDM70860.1| lipoyl synthase [Roseobacter sp. AzwK-3b] Length = 299 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 107/256 (41%), Gaps = 22/256 (8%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAA 97 SGGKR+R L L A + + + ACAIE +H +L+HDD+ LRRG+ Sbjct: 48 SGGKRIRARLVLDGARLHDIPEARALWPACAIEAMHAYSLVHDDLPCMDDDDLRRGQPTV 107 Query: 98 RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ-LSLSKNLDV 156 + W T+VL GD L + AF + +A + +A +LA Q + L + LD+ Sbjct: 108 HIRWNEATAVLTGDALQALAFELATHPDGAATAQARADLALSLARAAGGQGMVLGQALDI 167 Query: 157 TEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 E + H+ KT L A +A + A + FQ+ Sbjct: 168 AAETADRPLTLDEITHLQAGKTGALIEWAACAGPRMALADTAPLAAYAAALGLA---FQI 224 Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK------STINDGK 261 DDV+D G+ GK +G+D GK T +L R + S D Sbjct: 225 QDDVIDVIGDAAAAGKAVGKDAAAGKATFVSLLGLDEARARAASLVDHACDALSGYGDDA 284 Query: 262 ISVENLKKAFIIMREN 277 S+ L + F+I R + Sbjct: 285 ESLRALAR-FVISRHS 299 >gi|85001640|ref|XP_955531.1| farnesyl pyrophosphate synthetase [Theileria annulata strain Ankara] gi|65303677|emb|CAI76055.1| farnesyl pyrophosphate synthetase, putative [Theileria annulata] Length = 384 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 38/253 (15%) Query: 41 GGKRLRPMLTLAT----------------ALMLEYRGDNHV---LLACAIEFIHTATLLH 81 GGK LR + L+T L++ NH+ ++A +E + T+ L+ Sbjct: 57 GGKMLRGTMVLSTVKSLCGTNIPENLMTQTLIVGMYNSNHLKQFIVAWCVELLQTSFLVA 116 Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIET-----KSQEALEALS 134 DD++D S RR LV S + D FL + + ++ T K E +E + Sbjct: 117 DDIIDKSTKRRSNTCWYLVPTIGVSNAINDVMFLYTLIYRILFNTMKDSKKFLEIIETFN 176 Query: 135 LVACTLAEGELRQLSLSKNLDVTEED-------YLHVIKSKTAVL-FSAALEVSSLIAGV 186 V+ T G+ + S N DV D + + K+KT+ F L++ +++GV Sbjct: 177 RVSMTTILGQHLDIYES-NSDVLFHDSKEATKLFAEICKNKTSYYSFFLPLKLGMMLSGV 235 Query: 187 Q--NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + N ++S + +G FQ DD LD G+ + GKN G D + K + + A Sbjct: 236 ELSNLFYSKVESISILIGTLFQAQDDYLDCYGDPDNFGKN-GTDIQTRKCSWLLSQALTI 294 Query: 245 GTKREKNFWKSTI 257 ++ +KN K I Sbjct: 295 ASEEQKNLIKENI 307 >gi|63103173|gb|AAY33492.1| bifunctional GPPS/FPPS isoprenyl diphosphate synthase precursor [Myzus persicae] Length = 362 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 38/253 (15%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHT 76 +PDV K+L GGK+ R + + + ML D +L +E + Sbjct: 46 VPDVTKWLAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQA 105 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEA--- 129 L+ DD++D++ RRG R W + V D LL QA +I+ ++ Sbjct: 106 YQLVLDDIMDNAITRRG----RPCWYRHNDIGLMAVNDGVLLEQAIYQLIKKYFKDKPYY 161 Query: 130 ---LEALSLVACTLAEGE-LRQLSL----SKNLD-VTEEDYLHVIKSKTAVL-FSAALEV 179 LE V A G+ L L+ SK L+ T E+Y ++K KTA F + + Sbjct: 162 THILELFFDVTMKTAMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVCL 221 Query: 180 SSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + + + RQA K+ + +G FQ+ DD LD G+ + MGK IG D +GK + Sbjct: 222 AMRMTNINDPEIFRQA-KTILLEMGHFFQVQDDFLDCYGDPDVMGK-IGTDIEDGKCSWL 279 Query: 238 VILAFQRGTKREK 250 ++A Q+ +K Sbjct: 280 AVVALQKVNSEQK 292 >gi|226468294|emb|CAX69824.1| trans-hexaprenyltranstransferase [Schistosoma japonicum] Length = 176 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 10/178 (5%) Query: 148 LSLSKNLDVTE---EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA--LKSYGMNLG 202 + LS N D + + YL KTA L + + + +++ S R + +G +LG Sbjct: 2 MQLSTNSDDDDKRFQAYLTKTYRKTASLIANSCKAVAMLTVPTLSQRHIDDMYDFGKHLG 61 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQL+DDVLD+ + ++GK G D + G T PV+ A QR + + DG Sbjct: 62 MAFQLIDDVLDFVTDEAKLGKPSGADLQMGIATGPVLFAAQRYPELNTILLRQFSLDG-- 119 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + ++A +++++ + T A + Q A+ L DS +K+L+ V LQR Sbjct: 120 ---DTERALELVQQSDGVGQTRMLAEFHFQAAQRCLFQFRDSLSRKALLHVAANFLQR 174 >gi|167519034|ref|XP_001743857.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777819|gb|EDQ91435.1| predicted protein [Monosiga brevicollis MX1] Length = 346 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 26/204 (12%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQT---SVLVGD-FLLSQAFCMV 121 +L IE++ L+ DD++D S RRG+ W Q +V + D FL+ A + Sbjct: 80 ILGWCIEWLQAFFLVADDIMDGSVTRRGQPC----WYKQENVGTVAINDSFLIEAAIYKL 135 Query: 122 IETKSQEA---LEALSLVACTLAEGELRQL----SLSKN---LD-VTEEDYLHVIKSKTA 170 ++ + ++ L L+ T + EL QL + ++ LD T E + +++K KTA Sbjct: 136 LKKHFKSTPVYVDLLELMLETTYQTELGQLLDLITAPEDQVVLDRFTIEKHTNIVKYKTA 195 Query: 171 VL-FSAALEVSSLIAGVQNSVRQAL---KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 F + ++ L+AGV++ QA K + +GI FQ+ DD LD G+ +GK IG Sbjct: 196 FYSFYLPVAMAMLLAGVKDE--QAFANAKDILLEMGIFFQVQDDYLDCYGDPKVIGK-IG 252 Query: 227 EDFRNGKPTLPVILAFQRGTKREK 250 D ++ K VI A QR T ++ Sbjct: 253 TDIQDNKCGWLVIQALQRATPEQR 276 >gi|63103171|gb|AAY33491.1| bifunctional putative mitochondrial GPPS/FPPS isorpenyl diphosphate synthase precursor [Myzus persicae] Length = 394 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 38/253 (15%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHT 76 +PDV K+L GGK+ R + + + ML D +L +E + Sbjct: 78 VPDVTKWLAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQA 137 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEA--- 129 L+ DD++D++ RRG R W + V D LL QA +I+ ++ Sbjct: 138 YQLVLDDIMDNAITRRG----RPCWYRHNDIGLMAVNDGVLLEQAIYQLIKKYFKDKPYY 193 Query: 130 ---LEALSLVACTLAEGE-LRQLSL----SKNLD-VTEEDYLHVIKSKTAVL-FSAALEV 179 LE V A G+ L L+ SK L+ T E+Y ++K KTA F + + Sbjct: 194 THILELFFDVTMKTAMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVCL 253 Query: 180 SSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + + + RQA K+ + +G FQ+ DD LD G+ + MGK IG D +GK + Sbjct: 254 AMRMTNINDPEIFRQA-KTILLEMGHFFQVQDDFLDCYGDPDVMGK-IGTDIEDGKCSWL 311 Query: 238 VILAFQRGTKREK 250 ++A Q+ +K Sbjct: 312 AVVALQKVNSEQK 324 >gi|162538561|gb|ABY19312.1| farnesyl diphosphate synthase 1 [Myzus persicae] Length = 394 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 38/253 (15%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHT 76 +PDV K+L GGK+ R + + + ML D +L +E + Sbjct: 78 VPDVTKWLAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQA 137 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEA--- 129 L+ DD++D++ RRG R W + V D LL QA +I+ ++ Sbjct: 138 YQLVLDDIMDNAITRRG----RPCWYRHNDIGLMAVNDGVLLEQAIYQLIKKYFKDKPYY 193 Query: 130 ---LEALSLVACTLAEGE-LRQLSL----SKNLD-VTEEDYLHVIKSKTAVL-FSAALEV 179 LE V A G+ L L+ SK L+ T E+Y ++K KTA F + + Sbjct: 194 THILELFFDVTMKTAMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVCL 253 Query: 180 SSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + + + RQA K+ + +G FQ+ DD LD G+ + MGK IG D +GK + Sbjct: 254 AMRMTNINDPEIFRQA-KTILLEMGHFFQVQDDFLDCYGDPDVMGK-IGTDIEDGKCSWL 311 Query: 238 VILAFQRGTKREK 250 ++A Q+ +K Sbjct: 312 AVVALQKVNSEQK 324 >gi|190149251|gb|AAY33490.3| putative mitochondrial isoprenyl diphosphate synthase precursor [Acyrthosiphon pisum] Length = 394 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 38/253 (15%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHT 76 +PDV K+L GGK+ R + + + ML D +L +E + Sbjct: 78 VPDVTKWLAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQA 137 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEA--- 129 L+ DD++D++ RRG R W + V D LL QA +I+ ++ Sbjct: 138 YQLVLDDIMDNAITRRG----RPCWYRHNDIGLMAVNDGVLLEQAIYQLIKKYFKDKPYY 193 Query: 130 ---LEALSLVACTLAEGE-LRQLSL----SKNLD-VTEEDYLHVIKSKTAVL-FSAALEV 179 LE V A G+ L L+ SK L+ T E+Y ++K KTA F + + Sbjct: 194 THILELFFDVTMKTAMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVCL 253 Query: 180 SSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + + + RQA K+ + +G FQ+ DD LD G+ + MGK IG D +GK + Sbjct: 254 AMRMTNINDPEIFRQA-KTILLEMGHFFQVQDDFLDCYGDPDVMGK-IGTDIEDGKCSWL 311 Query: 238 VILAFQRGTKREK 250 ++A Q+ +K Sbjct: 312 AVVALQKVNSEQK 324 >gi|169613953|ref|XP_001800393.1| hypothetical protein SNOG_10111 [Phaeosphaeria nodorum SN15] gi|160707244|gb|EAT82446.2| hypothetical protein SNOG_10111 [Phaeosphaeria nodorum SN15] Length = 347 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 10/182 (5%) Query: 36 YLIFSGGKRLRPMLTLATALMLEY---RGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 YL GK +R A L L+ R +H AC + ++HTA+LL DDV D S LRR Sbjct: 133 YLYGHPGKDIRSQCIAAFNLWLKVPPERIGSHN--ACQLGWLHTASLLVDDVEDSSLLRR 190 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 G A ++G ++ +++ +A ++ + + +E + L G+ L Sbjct: 191 GIPVAHSIFGTPQTINTANYVYFKALQDLLRMNNPKLIEIFTEELLNLHRGQGMDLYWRD 250 Query: 153 NLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 +L +E DYL ++ +KT LF A+++ + V + + +G+ FQ++DD Sbjct: 251 SLTCPSEADYLEMVGNKTGGLFRLAIKLMQAESAVDVDCAPLVST----IGLLFQILDDH 306 Query: 212 LD 213 L+ Sbjct: 307 LN 308 >gi|166154843|ref|YP_001654961.1| dimethylallyltransferase [Chlamydia trachomatis 434/Bu] gi|166155718|ref|YP_001653973.1| dimethylallyltransferase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336124|ref|ZP_07224368.1| dimethylallyltransferase [Chlamydia trachomatis L2tet1] gi|165930831|emb|CAP04329.1| dimethylallyltransferase [Chlamydia trachomatis 434/Bu] gi|165931706|emb|CAP07283.1| dimethylallyltransferase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 291 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 24/202 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLL--HDDVVDDS 88 D ++Y + GGKR+RP+L A + D VL A AIE+IHT+TL+ +DD Sbjct: 31 DPIEYALLGGGKRVRPLLVGLFAEGIHKERD--VLDTAIAIEYIHTSTLIADDLPCMDDD 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG----- 143 +RRGK + + +++L L+ A+ + K+ +AL+A+ + E Sbjct: 89 DMRRGKPSVHKAFDEASALLASYALIPAAYARI--RKNAKALKAVVSCEQDVEEAYEDIL 146 Query: 144 ELRQLSLSKN------------LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 EL +L D ++E+ L +IK KT LF A L G + Sbjct: 147 ELIELRFGVGGILGGQYEDVFFHDFSKENVLGIIKKKTGALFEIACVSGWLFGGGERESS 206 Query: 192 QALKSYGMNLGIAFQLVDDVLD 213 + + + G+ FQ+ DD+ D Sbjct: 207 TLVAEFAEHFGLLFQIRDDLAD 228 >gi|294997085|dbj|BAJ05823.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae] Length = 412 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 5/231 (2%) Query: 11 DMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 + E +NF + D E ++ +Y+ GK R L A +L+ ++ Sbjct: 112 EHEDLNFTPKRSWTDDKEKVVRAPFEYVASHPGKDFRSQLINAFNALLQVPPSRLDIITT 171 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+ +H ++LL DDV D S LRRG A ++G ++ +F+ + + + Sbjct: 172 AVGMLHDSSLLVDDVQDSSELRRGFPVAHNIFGVPQTINSANFIYYAQLQELQKLGNPSI 231 Query: 130 LEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + +L G+ L L TE+DYL ++ +KT LF +++ + A + Sbjct: 232 ISVFADELVSLHRGQGMDLFWRDKLTCPTEDDYLEMVGNKTGGLFRLGIKL--MQAESPS 289 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S + + +G+ FQ+ DD ++ K + ED GK + PVI Sbjct: 290 SSLDCVPLVNL-IGLIFQIRDDYMNLSSREYSDNKGLCEDLTEGKFSFPVI 339 >gi|149238027|ref|XP_001524890.1| hypothetical protein LELG_03922 [Lodderomyces elongisporus NRRL YB-4239] gi|146451487|gb|EDK45743.1| hypothetical protein LELG_03922 [Lodderomyces elongisporus NRRL YB-4239] Length = 347 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 25/203 (12%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-- 123 L+ IE +H A+LL DDV D S RRG +A + +G ++ G+ + +A V Sbjct: 60 LINEVIEILHNASLLIDDVEDSSNFRRGYPSAHMKYGVPLTINCGNLMYFEAIEKVYNLW 119 Query: 124 ----TKSQEALEALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIK 166 K L L+LV + E++ + LD+ + DY + K Sbjct: 120 RLKLGKEDTTLATLALV-WEIVMPEMKNFHKGQGLDIYWRDNLPDLESLPSVVDYCQMAK 178 Query: 167 SKTAVLFSAALEVSSLIAG----VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 KT LF A+ + L + + + +S LG+ +Q+ DD L+ E Sbjct: 179 DKTGGLFRLAVRLLRLFSSGSTHLDSEYNGVFESIANCLGVIYQIRDDYLNIVDERYSHM 238 Query: 223 KNI-GEDFRNGKPTLPVILAFQR 244 K I GED GK + P++++ + Sbjct: 239 KGIRGEDLIEGKLSFPILVSLTK 261 >gi|219122674|ref|XP_002181666.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406942|gb|EEC46880.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 330 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 3/171 (1%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H A+LL DD+ D+S LRRG A ++G + +++ A V S A++ Sbjct: 70 LHNASLLIDDIEDNSKLRRGNPVAHSIFGIPQVINCSNYVYFLALEKVHALNSPTAMQVF 129 Query: 134 SLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L G+ ++ ++ TE +YL +++ KT LF A+ + A Sbjct: 130 VGELLNLHRGQGHDIAWRDSIRCPTEGEYLTMVQDKTGGLFRLAVGLMQCFATTHRDT-- 187 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + NL + FQ+ DD ++ E K+ ED GK + P+I A + Sbjct: 188 DFSNLVNNLAMYFQIRDDFINLADEEYMKSKSFCEDLTEGKFSFPIIHAIR 238 >gi|119499223|ref|XP_001266369.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] gi|119414533|gb|EAW24472.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] Length = 545 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 101/221 (45%), Gaps = 21/221 (9%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVVDDSA 89 D V Y+ K +R + AL + ++ +H++ + ++ +H +TL+ DD+ D S Sbjct: 246 DPVHYIQSLPSKNMRS--KVVDALNIWFQLPHHLVDTVKGTVDDLHNSTLILDDIQDSSY 303 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFC-MVIETKSQEALEALSLVACTLAEGELRQL 148 LRRG A V+G+ + +L++QA +++ + AL T L++L Sbjct: 304 LRRGFAATHHVFGSAQCINSATYLVAQAASRLIVHNEQYPAL-------ITFFLDGLKEL 356 Query: 149 SLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 +L ++ D+ + E+Y+ ++ KT V+F + + + Q L Sbjct: 357 ALGQSWDLNWKSTGYCPSTEEYMAMVDGKTGVMFDMIIRMMHCFSSSQTVPVPELSQLTK 416 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 LG +Q+ DD + + E K + ED GK + P+ + Sbjct: 417 LLGRWYQVRDDYQNLQDEQYTAQKGLCEDLDEGKLSYPLTV 457 >gi|67902312|ref|XP_681412.1| hypothetical protein AN8143.2 [Aspergillus nidulans FGSC A4] gi|40739975|gb|EAA59165.1| hypothetical protein AN8143.2 [Aspergillus nidulans FGSC A4] gi|259480909|tpe|CBF73971.1| TPA: geranylgeranyl pyrophosphate synthetase AtmG, putative (AFU_orthologue; AFUA_8G02400) [Aspergillus nidulans FGSC A4] Length = 355 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 19/222 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E+I V Y+ GK +R L A + + ++ A+ +H A+LL DD+ D Sbjct: 68 EIISAPVHYISTLPGKDIRGKLISAFNEWFQIPDEQLEIIKRAVGLLHVASLLIDDIEDY 127 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACTLAEGELR 146 S LRRG A ++G ++ ++ QA V++ + ++AL + L G+ Sbjct: 128 SKLRRGFPVAHSIFGIPQTINSANYAYFQAQNEVLKLRRCEKALRIFTEELLRLHRGQGM 187 Query: 147 QLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 L +L +EE+YL ++ +KT LF A+++ L + V +R Sbjct: 188 DLYWRDSLTCPSEEEYLDMVANKTGGLFRLAIKLIQLESDVDEFIR-------------- 233 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 DD + + + K GED GK + P++ + + ++ Sbjct: 234 ---DDYQNLQSDQYAKNKGFGEDITEGKFSYPIVHSIRSSSR 272 >gi|302812450|ref|XP_002987912.1| hypothetical protein SELMODRAFT_127038 [Selaginella moellendorffii] gi|300144301|gb|EFJ10986.1| hypothetical protein SELMODRAFT_127038 [Selaginella moellendorffii] Length = 374 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 113/249 (45%), Gaps = 35/249 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV-LVG---DFLLSQAFCMVI 122 L IE++ L+ DD++DDS RRGK + W Q +V LV LL ++ Sbjct: 109 LGWCIEWLQAYFLVMDDIMDDSHTRRGKPS----WFKQPNVGLVAANDALLLRNHVPRIL 164 Query: 123 ETKSQEALEALSL------VACTLAEGELRQL--SLSKNLDVTE---EDYLHVIKSKTAV 171 L L V A G++ L S + +D+++ E YL ++K KTA Sbjct: 165 RKYFHGQLYYFDLRELFDEVEYQTACGQMLDLITSPAGKVDLSKYVMETYLRIVKFKTA- 223 Query: 172 LFSAALEVSSLI---AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 +S L V+ + NS ++ K + +G FQ+ DD LD G + +GK +G D Sbjct: 224 FYSFYLPVACALYMSGESDNSKFESAKQILLQMGTYFQIQDDFLDCYGHPDVIGK-VGTD 282 Query: 229 FRNGKPTLPVILAFQRG-----TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDT 283 ++ K + ++ A +R T+ E N+ K VE +KK + + A + Sbjct: 283 IQDAKCSWLIVRAIERADASQKTRLENNYGKKD----NACVEEVKKVYNDL--GLAAAFS 336 Query: 284 EYRAYSYGQ 292 EY+ SYG+ Sbjct: 337 EYQQTSYGR 345 >gi|189199468|ref|XP_001936071.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983170|gb|EDU48658.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 630 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 23/189 (12%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H+A+L+ DD+ D S+LRRG+ A V+G ++ G C I QE + L Sbjct: 375 LHSASLMLDDIEDGSSLRRGQPATHTVFGTAQTINSG--------CWEILNAVQET-QQL 425 Query: 134 SLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEV---SS 181 L A + EL +L + ++ D+ +E++YL ++ KT LF + + SS Sbjct: 426 GLKAVKIVLEELSELHIGQSYDLYWTEHSRCPSEDEYLEMVSKKTGGLFRLIVRLLLDSS 485 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI-- 239 + ++ + +GI +Q+ DD + + K +D GK + P++ Sbjct: 486 ESKAPKGNLHTDMGHLAGLIGIQYQIRDDYQNLYCRDYGVQKGFCQDLDEGKFSFPLLHA 545 Query: 240 LAFQRGTKR 248 L+ Q G+K+ Sbjct: 546 LSVQPGSKK 554 >gi|255349012|ref|ZP_05381019.1| dimethylallyltransferase [Chlamydia trachomatis 70] gi|255503551|ref|ZP_05381941.1| dimethylallyltransferase [Chlamydia trachomatis 70s] gi|255507230|ref|ZP_05382869.1| dimethylallyltransferase [Chlamydia trachomatis D(s)2923] gi|289525671|emb|CBJ15152.1| dimethylallyltransferase [Chlamydia trachomatis Sweden2] gi|296435238|gb|ADH17416.1| dimethylallyltransferase [Chlamydia trachomatis E/150] gi|296438957|gb|ADH21110.1| dimethylallyltransferase [Chlamydia trachomatis E/11023] Length = 291 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 24/202 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLL--HDDVVDDS 88 D ++Y + GGKR+RP+L A + D VL A AIE+IHT+TL+ +DD Sbjct: 31 DPIEYALLGGGKRVRPLLVGLFAEGVHKERD--VLDTAIAIEYIHTSTLIADDLPCMDDD 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG----- 143 +RRGK + + +++L L+ A+ + K+ +AL+A+ + E Sbjct: 89 DMRRGKPSVHKAFDEASALLASYALIPAAYARI--RKNAKALKAVVSCEQDVEEAYEDIL 146 Query: 144 ELRQLSLSKN------------LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 EL +L D ++E+ L +IK KT LF A L G + Sbjct: 147 ELIELRFGVGGILGGQYEDIFFHDFSKENVLGIIKKKTGALFEIACVSGWLFGGGERESS 206 Query: 192 QALKSYGMNLGIAFQLVDDVLD 213 + + + G+ FQ+ DD+ D Sbjct: 207 TLVAEFAEHFGLLFQIRDDLAD 228 >gi|195013012|ref|XP_001983789.1| GH15381 [Drosophila grimshawi] gi|193897271|gb|EDV96137.1| GH15381 [Drosophila grimshawi] Length = 337 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 6/224 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ Y+ GK+ R L LA L + + ++ +H ++LL DD+ D+ Sbjct: 22 EILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLTQIGEIVQMLHNSSLLIDDIEDN 81 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ L A V + EA + + L G+ + Sbjct: 82 SILRRGVPVAHSIYGVASTINAANYTLFLALEKVQQLGHPEATKVYTEQLLELHRGQGME 141 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + +E DY + KT LF A+ + L + + ++ LG+ FQ Sbjct: 142 IYWRDSFVCPSESDYKLMTVRKTGGLFMLAIRLMQLFS----ANKEDYTKLTAILGLYFQ 197 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD + + K+ ED GK PVI A R K++K Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV-RSQKQDK 240 >gi|195126086|ref|XP_002007505.1| GI12986 [Drosophila mojavensis] gi|193919114|gb|EDW17981.1| GI12986 [Drosophila mojavensis] Length = 337 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 6/224 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ Y+ GK+ R L LA L + + ++ +H ++LL DD+ D+ Sbjct: 22 EILLQPFTYIQQIPGKQFRSELALAFNHWLLIPPEKLTQIGEIVQMLHNSSLLIDDIEDN 81 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ L A V + EA + + L G+ + Sbjct: 82 SILRRGVPVAHSIYGVASTINAANYTLFLALEKVQQLGHPEATKVYTEQLLELHRGQGME 141 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + +E DY + KT LF A+ + L + ++ LG+ FQ Sbjct: 142 IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS----ENKEDFTKLTAILGLYFQ 197 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD + + K+ ED GK PVI A R K++K Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV-RTQKQDK 240 >gi|156383848|ref|XP_001633044.1| predicted protein [Nematostella vectensis] gi|156220109|gb|EDO40981.1| predicted protein [Nematostella vectensis] Length = 355 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 79/296 (26%), Positives = 129/296 (43%), Gaps = 41/296 (13%) Query: 23 ICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHV----LLACAIEFIH 75 I ++ + +V++Y + GGKR R + + + L E+ D H+ LL +E+ Sbjct: 42 IGDSIKWLREVLEYNV-PGGKRNRGLSVIGSLRHLIREEHFTDEHLRVALLLGWCVEWFQ 100 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET---------KS 126 L+ DD++D S RRG+ W Q VG+ ++ M+ +T K Sbjct: 101 AFFLVADDIMDQSMTRRGQPC----WYRQPE--VGNIAINDG-IMIEQTVFRLLKKHIKH 153 Query: 127 Q----EALEALSLVACTLAEGE---LRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALE 178 Q + +E VA + G+ LR T + Y ++K KTA F + Sbjct: 154 QSYYVDVVELFHEVAYLTSLGQSLDLRTKPGENFEGFTLDRYRTIVKHKTAFYSFYLPVA 213 Query: 179 VSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ +AG+++ A K + +G FQ+ DD +D G+ + GK +G D GK T Sbjct: 214 LAMFVAGIKDEASHANAKIILLEMGEFFQIQDDYIDVFGDASVTGK-VGTDIEEGKCTWL 272 Query: 238 VILAFQRGTKREKNFWKST--INDGKISVENLKKAFIIMRE-NRALVDTEYRAYSY 290 V+ A +R ++ K IND +E K + RE N V EY SY Sbjct: 273 VVQALKRANAQQLTIIKENLGIND----IEASAKVKRVYRELNLEQVFHEYEEASY 324 >gi|303314115|ref|XP_003067066.1| polyprenyl synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106734|gb|EER24921.1| polyprenyl synthetase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 731 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 27/281 (9%) Query: 18 LILKRICSDVEMIPDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L L + DV + P +YL + S G R + + +L T L + + ++ ++ +H Sbjct: 419 LNLPELSDDVVLQP--YRYLTSLPSKGFRDQAIDSLNTWLKVPQKSAK--MIKSIVKMLH 474 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 +A+L+ DD+ DDS LRRG+ + ++G ++ + +A M E + L Sbjct: 475 SASLMLDDIEDDSPLRRGRPSTHNIYGTAQTINSATYQYVKATGMATELGNPSCLRIFIE 534 Query: 136 VACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L G+ L + N L + +YL ++ KT LF + ++A ++ VR+ + Sbjct: 535 EMQQLHVGQSYDLYWTHNTLCPSVSEYLKMVDMKTGGLFRMLTRL--MVA--ESPVREKV 590 Query: 195 KSYGMNL-----GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +NL G FQ+ DD + K ED GK + +I R + E Sbjct: 591 SDDALNLLSCLVGRFFQIRDDYQNLASADYAKQKGFAEDLDEGKLSFTLIHCI-RTVESE 649 Query: 250 KNFWKSTIN----------DGKISVENLKKAFIIMRENRAL 280 F + DGK+S+E ++ M++ ++L Sbjct: 650 PKFAGDAMQLRASLMKRRLDGKLSIEAKREVLATMKKTKSL 690 >gi|320037302|gb|EFW19239.1| geranylgeranyl pyrophosphate synthase [Coccidioides posadasii str. Silveira] Length = 731 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 27/281 (9%) Query: 18 LILKRICSDVEMIPDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L L + DV + P +YL + S G R + + +L T L + + ++ ++ +H Sbjct: 419 LNLPELSDDVVLQP--YRYLTSLPSKGFRDQAIDSLNTWLKVPQKSAK--MIKSIVKMLH 474 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 +A+L+ DD+ DDS LRRG+ + ++G ++ + +A M E + L Sbjct: 475 SASLMLDDIEDDSPLRRGRPSTHNIYGTAQTINSATYQYVKATGMATELGNPSCLRIFIE 534 Query: 136 VACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L G+ L + N L + +YL ++ KT LF + ++A ++ VR+ + Sbjct: 535 EMQQLHVGQSYDLYWTHNTLCPSVSEYLKMVDMKTGGLFRMLTRL--MVA--ESPVREKV 590 Query: 195 KSYGMNL-----GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +NL G FQ+ DD + K ED GK + +I R + E Sbjct: 591 SDDALNLLSCLVGRFFQIRDDYQNLASADYAKQKGFAEDLDEGKLSFTLIHCI-RTVESE 649 Query: 250 KNFWKSTIN----------DGKISVENLKKAFIIMRENRAL 280 F + DGK+S+E ++ M++ ++L Sbjct: 650 PKFAGDAMQLRAFLMKRRLDGKLSIEAKREVLATMKKTKSL 690 >gi|170785230|pdb|3CC9|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase In Complex With Geranylgeranyl Diphosphate gi|170785231|pdb|3CC9|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase In Complex With Geranylgeranyl Diphosphate gi|170785232|pdb|3CC9|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase In Complex With Geranylgeranyl Diphosphate gi|170785233|pdb|3CC9|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase In Complex With Geranylgeranyl Diphosphate gi|215794781|pdb|3EZ3|A Chain A, Crystal Structure Of Plasmodium Vivax Geranylgeranylpyrophosphate Synthase Pvx_092040 With Zoledronate And Ipp Bound gi|215794782|pdb|3EZ3|B Chain B, Crystal Structure Of Plasmodium Vivax Geranylgeranylpyrophosphate Synthase Pvx_092040 With Zoledronate And Ipp Bound gi|215794783|pdb|3EZ3|C Chain C, Crystal Structure Of Plasmodium Vivax Geranylgeranylpyrophosphate Synthase Pvx_092040 With Zoledronate And Ipp Bound gi|215794784|pdb|3EZ3|D Chain D, Crystal Structure Of Plasmodium Vivax Geranylgeranylpyrophosphate Synthase Pvx_092040 With Zoledronate And Ipp Bound gi|298508704|pdb|3MYS|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase In Complex With Geranylgeranyl Dipho gi|298508705|pdb|3MYS|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase In Complex With Geranylgeranyl Dipho gi|298508706|pdb|3MYS|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase In Complex With Geranylgeranyl Dipho gi|298508707|pdb|3MYS|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase In Complex With Geranylgeranyl Dipho gi|312207872|pdb|3LDW|A Chain A, Crystal Structure Of Plasmodium Vivax Geranylgeranylpyrophosphate Synthase Pvx_092040 With Zoledronate And Ipp Bound gi|312207873|pdb|3LDW|B Chain B, Crystal Structure Of Plasmodium Vivax Geranylgeranylpyrophosphate Synthase Pvx_092040 With Zoledronate And Ipp Bound gi|312207874|pdb|3LDW|C Chain C, Crystal Structure Of Plasmodium Vivax Geranylgeranylpyrophosphate Synthase Pvx_092040 With Zoledronate And Ipp Bound gi|312207875|pdb|3LDW|D Chain D, Crystal Structure Of Plasmodium Vivax Geranylgeranylpyrophosphate Synthase Pvx_092040 With Zoledronate And Ipp Bound gi|312208197|pdb|3PH7|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase In Complex With Geranylgeranyl Diphosphate gi|312208198|pdb|3PH7|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase In Complex With Geranylgeranyl Diphosphate gi|312208199|pdb|3PH7|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase In Complex With Geranylgeranyl Diphosphate gi|312208200|pdb|3PH7|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase In Complex With Geranylgeranyl Diphosphate Length = 396 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 133/305 (43%), Gaps = 65/305 (21%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHV---------LLACAIEFIHTATLLHDDVVDDSALR 91 GGK R +L + L+ EY + + LA IE + A L+ DD++D +R Sbjct: 79 GGKNNRGILVI---LIYEYVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMR 135 Query: 92 RGKVAARLVWGNQTSVLVGDFLL---------------SQAFCMVIETKSQEALEAL--- 133 R K L+ +T V D LL + VI T L+ + Sbjct: 136 RNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQ 195 Query: 134 ----SLVACTLAEGELRQLSLSKNLDVTEED-----------YLHVIKSKTAVL-FSAAL 177 ++ + ++ R++ ++ N++V E+ Y +++ KTA F + Sbjct: 196 HLDTNIFSDKYSDAH-REIDVN-NINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPI 253 Query: 178 EVSSLIAG--VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L+AG V N + + ++ M +G FQ+ DD LD G+ + GK +G D +N K T Sbjct: 254 VCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDIFGDSTKTGK-VGSDIQNNKLT 312 Query: 236 LPVILAFQRGTKRE-----KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290 P+I F+ ++ + KN+ K+ + K+ +++L + + I + Y +Y Sbjct: 313 WPLIKTFELCSEPDKIKIVKNYGKNNLACVKV-IDSLYEQYKIRK--------HYESYEK 363 Query: 291 GQKAK 295 QKAK Sbjct: 364 AQKAK 368 >gi|53734594|gb|AAH83212.1| Ggps1 protein [Danio rerio] Length = 284 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 10/223 (4%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E +H A+LL DD+ D S LRRG A ++G + + +++ V+ + EA+ Sbjct: 30 EMLHNASLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLMLEHPEAVR 89 Query: 132 ALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L G+ + +E +Y ++ KT LF A+ + L + + + Sbjct: 90 VFTRQLLELHRGQGLDIHWRDTYTCPSEAEYRAMVLQKTGGLFGLAVGLMQLFSDWKRDL 149 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK---PTLPVILAFQRGTK 247 + L + LG+ FQ+ DD + + K+ ED GK PT+ I + T+ Sbjct: 150 KPLLDT----LGLYFQIRDDYANLNSKQYSANKSFCEDLTEGKFSFPTIHAIWSHPESTQ 205 Query: 248 REKNFWKSTIN--DGKISVENLKKAFIIMRENRALVDTEYRAY 288 + + T N + V+ L+K + L+D E AY Sbjct: 206 VQNILRRRTENLDIKRYCVDYLEKVGSFAYTRQTLLDLEVEAY 248 >gi|195376189|ref|XP_002046879.1| GJ13129 [Drosophila virilis] gi|194154037|gb|EDW69221.1| GJ13129 [Drosophila virilis] Length = 337 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 6/224 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ Y+ GK+ R L LA L + + ++ +H ++LL DD+ D+ Sbjct: 22 EILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLTQIGEIVQMLHNSSLLIDDIEDN 81 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ L A V + EA + + L G+ + Sbjct: 82 SILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGHPEATKVYTEQLLELHRGQGME 141 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + +E DY + KT LF A+ + L + ++ LG+ FQ Sbjct: 142 IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS----DNKEDYSKLTAILGLYFQ 197 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD + + K+ ED GK PVI A R K++K Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV-RTQKQDK 240 >gi|115390482|ref|XP_001212746.1| predicted protein [Aspergillus terreus NIH2624] gi|114195142|gb|EAU36842.1| predicted protein [Aspergillus terreus NIH2624] Length = 773 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 22/178 (12%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 + +H ++L+ DD+ D SALRRG+ A +G ++ +++ A V + +A Sbjct: 521 VHMLHNSSLMLDDIEDASALRRGQPATHTFYGISQTINSANYVYVHAVHEVTRLYNPDA- 579 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSS 181 ELR L ++LD+ + E+Y+ ++ +KT LF L + + Sbjct: 580 ------------DELRNLHRGQSLDLYWRHHARCPSMEEYIVMVDNKTGGLFRLMLRLMT 627 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + + AL G +Q+ DD L+ E K EDF GK +LP+I Sbjct: 628 AESSISRPLDTALCRLLTLTGRYYQIRDDYLNLASADYESKKGFCEDFDEGKFSLPLI 685 >gi|46447630|ref|YP_008995.1| putative geranyltranstransferase [Candidatus Protochlamydia amoebophila UWE25] gi|46401271|emb|CAF24720.1| putative geranyltranstransferase [Candidatus Protochlamydia amoebophila UWE25] Length = 269 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 21/210 (10%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 D + D +Y + +GGKR RP L L A L ++ D C +E+ HTA+L+ DD+ Sbjct: 2 GDKTSLRDACEYALLNGGKRFRPALVLMIAKALGFQVDVSQAALC-VEYFHTASLIADDL 60 Query: 85 --VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIET-----------KSQEAL 130 +D+ RR ++G TS+L L++ + C+ T +E L Sbjct: 61 PCMDNDDERRNAPTLHKIFGESTSLLATYTLIAAGYACLARNTAILKDSAHPYVNQKERL 120 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYL-----HVIKSKTAVLFSAALEVSSLIAG 185 L+L T G L + LD+ + VI+ KT LF + + + G Sbjct: 121 CVLALENATQNTGILGATG-GQYLDLNPPNLSLKTLKEVIEKKTVTLFEISFVLGWIFGG 179 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 +K + G+AFQ+ DD+ D + Sbjct: 180 GVLEKLSLVKKCAGHFGMAFQIADDLGDMK 209 >gi|239977900|ref|ZP_04700424.1| putative polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 312 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 4/115 (3%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 D PD SGGK LR L + +A + G + A A+E +HT +LLHDD++ Sbjct: 71 DPGGAPDPTG----SGGKGLRQALAVLSAEAVGASGTTALPAAVAVELVHTFSLLHDDIM 126 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 D LRR + A +G +VL GD L + A + E + A A+ ++ TL Sbjct: 127 DGDPLRRRRPAVWRAYGVGPAVLAGDALHALAVQTLAEAPGERAPAAVRHLSRTL 181 >gi|118138423|pdb|2IHI|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Farnesyl Pyrophosphate Synthase (Pv092040) gi|118138424|pdb|2IHI|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Farnesyl Pyrophosphate Synthase (Pv092040) gi|118138425|pdb|2IHI|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Farnesyl Pyrophosphate Synthase (Pv092040) gi|118138426|pdb|2IHI|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Farnesyl Pyrophosphate Synthase (Pv092040) gi|294662582|pdb|3MAV|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Farnesyl Pyrophosphate Synthase (Pv092040) gi|294662583|pdb|3MAV|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Farnesyl Pyrophosphate Synthase (Pv092040) gi|294662584|pdb|3MAV|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Farnesyl Pyrophosphate Synthase (Pv092040) gi|294662585|pdb|3MAV|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Farnesyl Pyrophosphate Synthase (Pv092040) Length = 395 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 133/305 (43%), Gaps = 65/305 (21%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHV---------LLACAIEFIHTATLLHDDVVDDSALR 91 GGK R +L + L+ EY + + LA IE + A L+ DD++D +R Sbjct: 78 GGKNNRGILVI---LIYEYVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMR 134 Query: 92 RGKVAARLVWGNQTSVLVGDFLL---------------SQAFCMVIETKSQEALEAL--- 133 R K L+ +T V D LL + VI T L+ + Sbjct: 135 RNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQ 194 Query: 134 ----SLVACTLAEGELRQLSLSKNLDVTEED-----------YLHVIKSKTAVL-FSAAL 177 ++ + ++ R++ ++ N++V E+ Y +++ KTA F + Sbjct: 195 HLDTNIFSDKYSDAH-REIDVN-NINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPI 252 Query: 178 EVSSLIAG--VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L+AG V N + + ++ M +G FQ+ DD LD G+ + GK +G D +N K T Sbjct: 253 VCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDIFGDSTKTGK-VGSDIQNNKLT 311 Query: 236 LPVILAFQRGTKRE-----KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290 P+I F+ ++ + KN+ K+ + K+ +++L + + I + Y +Y Sbjct: 312 WPLIKTFELCSEPDKIKIVKNYGKNNLACVKV-IDSLYEQYKIRK--------HYESYEK 362 Query: 291 GQKAK 295 QKAK Sbjct: 363 AQKAK 367 >gi|326773501|ref|ZP_08232784.1| polyprenyl synthetase [Actinomyces viscosus C505] gi|326636731|gb|EGE37634.1| polyprenyl synthetase [Actinomyces viscosus C505] Length = 364 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 50/257 (19%) Query: 38 IFSGGKRLRPMLTLATALML-------EY-RGDNHVLLACAIEFIHTATLLHDDVVDDSA 89 + SGGKR+R +L +L EY + V L A+E + L+HDD++D + Sbjct: 25 VLSGGKRMRAVLGAVGCAILSTPERRSEYLTASDAVHLGAALELYQASALVHDDLMDGAD 84 Query: 90 LRRGKVAARLVWG--NQTSVLVG--DFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 RRG AA V+ ++ +G + ++ + A E +S +A + + Sbjct: 85 TRRGLPAAHRVFARDHEDRGWLGRPQTFGANGAILLGDLLLSLAGEEMSALAPSRTSSQT 144 Query: 146 R----------------QLSLSKNLDVTEE-------------------DYLHVIKSKTA 170 R +++L + LDV E D L V++ K+A Sbjct: 145 RGSAVRHARSAFDAMTTEVALGQFLDVRSENLPLPWDREPGAAARLMQGDALSVVRHKSA 204 Query: 171 ---VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 V + + + L ++G ++GIAFQL DD L G GK G+ Sbjct: 205 RYSVRHPLLIGALLAGLDPSGATAEHLAAFGEDVGIAFQLRDDELGVFGSPQATGKPAGD 264 Query: 228 DFRNGKPTLPVILAFQR 244 D R GK T+ + L + R Sbjct: 265 DLREGKRTVLLALTWGR 281 >gi|323454203|gb|EGB10073.1| hypothetical protein AURANDRAFT_59945 [Aureococcus anophagefferens] Length = 326 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 20/225 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E + + Y+ + GK +R L A + L GD + + +H A+LL DD+ D Sbjct: 9 EALLEPFNYISENPGKNVRGSLIDAFNMWLGIPGDRVEAIKRIVSRLHNASLLVDDIEDG 68 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRGK A ++G +++ +++ F + E + EAL++ EL Sbjct: 69 SQLRRGKPVAHAIFGVPSTLNTANYVY---FIALEECHRLDNGEALAVFV-----EELLN 120 Query: 148 LSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 L + D+ TE +Y ++ KT LF A+ ++A + + + Sbjct: 121 LHRGQGQDILWRDSCRCPTEAEYTTMVLDKTGGLFRLAV---GMMAAFSDRRKGEFRKLV 177 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 L + FQ+ DD+++ R + K+ ED GK + P++ A Sbjct: 178 DLLALYFQIRDDLVNLRSDDYMRSKSYCEDLTEGKFSFPILHAVH 222 >gi|15605359|ref|NP_220145.1| dimethylallyltransferase [Chlamydia trachomatis D/UW-3/CX] gi|237803057|ref|YP_002888251.1| dimethylallyltransferase [Chlamydia trachomatis B/Jali20/OT] gi|237804978|ref|YP_002889132.1| dimethylallyltransferase [Chlamydia trachomatis B/TZ1A828/OT] gi|255311451|ref|ZP_05354021.1| dimethylallyltransferase [Chlamydia trachomatis 6276] gi|255317752|ref|ZP_05358998.1| dimethylallyltransferase [Chlamydia trachomatis 6276s] gi|3329075|gb|AAC68232.1| Geranylgeranyl pyrophosphate synthase [Chlamydia trachomatis D/UW-3/CX] gi|231273278|emb|CAX10193.1| dimethylallyltransferase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274291|emb|CAX11086.1| dimethylallyltransferase [Chlamydia trachomatis B/Jali20/OT] gi|296436165|gb|ADH18339.1| dimethylallyltransferase [Chlamydia trachomatis G/9768] gi|296437093|gb|ADH19263.1| dimethylallyltransferase [Chlamydia trachomatis G/11222] gi|296438025|gb|ADH20186.1| dimethylallyltransferase [Chlamydia trachomatis G/11074] gi|297140527|gb|ADH97285.1| dimethylallyltransferase [Chlamydia trachomatis G/9301] gi|297748758|gb|ADI51304.1| Dimethylallyltransferase [Chlamydia trachomatis D-EC] gi|297749638|gb|ADI52316.1| Dimethylallyltransferase [Chlamydia trachomatis D-LC] Length = 291 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 24/202 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLL--HDDVVDDS 88 D ++Y + GGKR+RP+L A + D VL A AIE+IHT+TL+ +DD Sbjct: 31 DPIEYALLGGGKRVRPLLVGLFAEGVHKERD--VLDTAIAIEYIHTSTLIADDLPCMDDD 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG----- 143 +RRGK + + +++L L+ A+ + K+ +AL+A+ + E Sbjct: 89 DMRRGKPSVHKAFDEASALLASYALIPAAYARI--RKNAKALKAVVSCEQDVEEAYEDIL 146 Query: 144 ELRQLSLSKN------------LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 EL +L D ++E+ L +IK KT LF A L G + Sbjct: 147 ELIELRFGVGGILGGQYEDIFFHDFSKENVLGIIKKKTGALFEIACVSGWLFGGGERESS 206 Query: 192 QALKSYGMNLGIAFQLVDDVLD 213 + + + G+ FQ+ DD+ D Sbjct: 207 TLVAEFAEHFGLLFQIRDDLAD 228 >gi|254381308|ref|ZP_04996673.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1] gi|194340218|gb|EDX21184.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1] Length = 404 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 81/268 (30%), Positives = 110/268 (41%), Gaps = 45/268 (16%) Query: 20 LKRICSD-----VEMIP----DVVKYL---IFSGGKRLRPMLTLATALMLEYRGDNHVL- 66 L+R C+D + + P DV + L GG R+R L AL D H Sbjct: 42 LERCCADFVAHSLSLDPVFSHDVAERLAAFTCDGGSRIRSRF-LWWALRACGGTDAHTPG 100 Query: 67 ---LACAIEFIHTATLLHDDVVDDSALRRGK--------------VAARLV----WGNQT 105 +A A+E I + L+HDDV+D SA+RRGK AAR + Sbjct: 101 ALRVAAALELIQSCALIHDDVMDQSAVRRGKPSFHTQIALQYSRTTAARQPGLSPFPQAA 160 Query: 106 SVLVGDFLLSQAFCMVIETK-----SQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +VL GD LS A +V E EAL + + G+ L + Sbjct: 161 AVLAGDLALSWADDLVAEADLDPPVRTEALRIWRAMRTEMIAGQYLDLHGQATSSRSAVQ 220 Query: 161 YLHVIKSKTA---VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + + K A V AL + A N+ +AL + G GIAFQL DD+L + Sbjct: 221 AIRTVCLKAARYTVEQPLALGAALAGADDANT--RALTAAGRCAGIAFQLRDDLLGVFDD 278 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRG 245 GK GED R+GK T + LA R Sbjct: 279 PALTGKPSGEDIRSGKATYLLALAHSRA 306 >gi|291449814|ref|ZP_06589204.1| LOW QUALITY PROTEIN: polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291352763|gb|EFE79665.1| LOW QUALITY PROTEIN: polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 209 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 54/101 (53%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 SGGK LR L + +A + G + A A+E +HT +LLHDD++D LRR + A Sbjct: 81 SGGKGLRQALAVLSAEAVGASGTTALPAAVAVELVHTFSLLHDDIMDGDPLRRRRPAVWR 140 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 +G +VL GD L + A + E + A A+ ++ TL Sbjct: 141 AYGVGPAVLAGDALHALAVQTLAEAPGERAPAAVRHLSRTL 181 >gi|76789367|ref|YP_328453.1| dimethylallyltransferase [Chlamydia trachomatis A/HAR-13] gi|76167897|gb|AAX50905.1| dimethylallyltransferase [Chlamydia trachomatis A/HAR-13] Length = 291 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 24/202 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLL--HDDVVDDS 88 D ++Y + GGKR+RP+L A + D VL A AIE+IHT+TL+ +DD Sbjct: 31 DPIEYALLGGGKRVRPLLVGLFAEGVHKERD--VLDTAIAIEYIHTSTLIADDLPCMDDD 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG----- 143 +RRGK + + +++L L+ A+ + K+ +AL+A+ + E Sbjct: 89 DMRRGKPSVHKAFDEASALLASYALIPAAYARI--RKNAKALKAVVSCEQDVEEAYEDIL 146 Query: 144 ELRQLSLSKN------------LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 EL +L D ++E+ L +IK KT LF A L G + Sbjct: 147 ELIELRFGIGGILGGQYEDIFFHDFSKENVLGIIKKKTGALFEIACVSGWLFGGGERESS 206 Query: 192 QALKSYGMNLGIAFQLVDDVLD 213 + + + G+ FQ+ DD+ D Sbjct: 207 TLVAEFAEHFGLLFQIRDDLAD 228 >gi|50955160|ref|YP_062448.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951642|gb|AAT89343.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 372 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 87/343 (25%), Positives = 143/343 (41%), Gaps = 64/343 (18%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL------------ATALMLEYRG--DNH 64 IL I ++ I + + + SGGKR R + AT + G D Sbjct: 25 ILVSIAEELSPIAEFSRDFL-SGGKRFRALFCFWGWQAVRTSGEDATDETVTAGGPLDAV 83 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRG--KVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 V +A A+E H A L+HDD++D+S RRG V R + + G ++F Sbjct: 84 VSVASALELFHAAALVHDDLIDNSDTRRGAPSVHRRFESLHDSEKWSG---CGKSFGTGA 140 Query: 123 ETK--------SQEALE-----ALSLVACTLAEGELRQLSL----SKNLDVTEE------ 159 T S E E +S A A E ++ + + LD+ EE Sbjct: 141 ATLLGDLLLILSDELFEEGIGQTVSPAARRAARAEFNRMRIDVTAGQYLDLFEEIGWAGR 200 Query: 160 -DYLHVIKSKTAVLFSAA-------LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 D + +++ +++ +A L + + +AG AL +G+ LGIA+QL DD+ Sbjct: 201 HDADQLARAERVIVYKSAKYSIESPLLIGASLAGANVGQLDALGGFGLPLGIAYQLRDDL 260 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVIL---AFQRGTKR--EKNFWKSTINDGKISVEN 266 L G+ GK G+D R GK T+ + L A G + ++ + G+I Sbjct: 261 LGVFGDAAVTGKPSGDDLREGKRTVLIALTREALPAGARATLDELLGDPDLTPGQIETLQ 320 Query: 267 L--KKAFIIMRENRALVDTEYRAYS------YGQKAKDSLRCL 301 L +++ + + R + D+ RA + G+ AK LR L Sbjct: 321 LTIRQSGAVEKVERMIADSVGRAIAALETAPIGESAKAQLRTL 363 >gi|66815947|ref|XP_641990.1| farnesyl diphosphate synthase [Dictyostelium discoideum AX4] gi|74849279|sp|Q9NH03|FPS_DICDI RecName: Full=Farnesyl diphosphate synthase; Short=Dfps; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Geranyltranstransferase gi|7188788|gb|AAF37872.1| farnesyl diphosphate synthase [Dictyostelium discoideum] gi|60469988|gb|EAL67969.1| farnesyl diphosphate synthase [Dictyostelium discoideum AX4] Length = 382 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 77/301 (25%), Positives = 129/301 (42%), Gaps = 28/301 (9%) Query: 40 SGGKRLRPMLTLAT-ALMLEYR--GDNHVLLA----CAIEFIHTATLLHDDVVDDSALRR 92 SGGK R + L + L++E R + + LA +E++ L+ DD++D S RR Sbjct: 78 SGGKMNRGLTVLHSLQLLVEGRQLSRSEIFLANVLGWCVEWLQAFFLVADDIMDQSITRR 137 Query: 93 GKVA----ARLVWGNQT--SVLVGD-FLLSQAFCMVI------ETKSQEALEALSLVACT 139 G+ A + N T S+ + D F+L ++I E + L+ + Sbjct: 138 GQPCWYRQANPISNNGTIGSIAINDSFILESCIYILIKKYFRNEPYYADILDIFHETSYQ 197 Query: 140 LAEGELRQLSLSKNLD----VTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNS-VRQA 193 G+L L+ N T Y ++K KTA F + ++ L+AG+ ++ Sbjct: 198 TELGQLLDLTTQPNRGDFSLFTLNTYRRIVKYKTAYYSFYLPVALAMLMAGITSTPAFST 257 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 K + +G FQ+ DD LD G +GK IG D K + + A GT + N Sbjct: 258 AKDILLPMGEFFQVQDDFLDCYGSPAVIGK-IGRDIEENKCSWMICQAILNGTPEQINLL 316 Query: 254 KSTIN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 K D VE +KK + + + D E +Y++ S+R +P + K L + Sbjct: 317 KKHYGLDNPTDVELVKKIYGEIGLKKIFKDYEDESYAFLISKIKSVRIMPQEVFIKLLSK 376 Query: 313 V 313 + Sbjct: 377 I 377 >gi|282890377|ref|ZP_06298905.1| hypothetical protein pah_c016o105 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499759|gb|EFB42050.1| hypothetical protein pah_c016o105 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 297 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 40/251 (15%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDD 87 + D +Y + +GGKR RP L L A L + D A A+EF HTA+L+ DD+ +D+ Sbjct: 31 VRDACEYALRNGGKRFRPALVLMVAKTLGKQADASEA-ALAVEFFHTASLIADDLPCMDN 89 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-----ACTLA- 141 RR + V+G ++L L+++ + + + + +S C LA Sbjct: 90 DDERRNMPSLHKVFGEDIALLASYALIAEGYRYLAQNSETLKQQQVSFSDRCDHLCVLAI 149 Query: 142 -----EGELRQLSLSKNLDVTEE--------DYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L + + LD+ E D LH KT LF + + L G + Sbjct: 150 QNVSYNTGLFGATGGQFLDIHESNLSLSALRDILH---KKTVSLFEISFVLGWLFGGGEL 206 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG-KPTLPVILAFQRGTK 247 +K + G+AFQ+ DD+ D + +D +NG K + +++ + K Sbjct: 207 EKLPLVKKAASHFGMAFQIADDLSDMQ-----------QDLKNGRKANMGLLMGVEETVK 255 Query: 248 REKNFWKSTIN 258 F K T++ Sbjct: 256 M---FHKETVS 263 >gi|62959187|gb|AAY23701.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-316] Length = 145 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 10/143 (6%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 HDD+ +DD +R GK + T+VL GD L + AF ++ + + + + Sbjct: 1 HDDMPGMDDDEMRHGKPTLHKAFDEATAVLAGDSLHALAFDILTQPDTSTDPFVRAELVA 60 Query: 139 TLAEGELRQ-LSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSV 190 TLA ++ + +D+ E+ + ++ KT L +A++E+ +++ V Sbjct: 61 TLARASGHDGMAGGQMMDIVSEEQSYDLRQVTRLQQLKTGALLAASVEMGAVLGRVAPEG 120 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 R L++Y ++G+AFQ+ DD+LD Sbjct: 121 RTHLRAYARDIGLAFQIADDILD 143 >gi|325192521|emb|CCA26954.1| farnesyl pyrophosphate synthetase putative [Albugo laibachii Nc14] Length = 346 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 41/257 (15%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV----LVGDFLLSQAFCMV 121 +L IE++ + L+ DD++D SA+RR R W + V + FLL V Sbjct: 80 ILGWCIEWLQASCLVIDDIMDQSAVRR----RRPCWYRNSKVQMIAINDSFLLVSIVFQV 135 Query: 122 IETK---SQEALEALSLVACTLAEGELRQL------------SLSKNLDVTEEDYLHVIK 166 I + + L + + EL QL LS+ T E Y ++ Sbjct: 136 IRNHFHGEDYYADLIELFRDVIQKTELGQLLDATCQPHERPPDLSR---FTTERYEKIVT 192 Query: 167 SKTAVL-FSAALEVSSLIAGVQNS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 KTA F + + L+ G+ +S + Q +SY + +GI FQ+ DD LD G+ +GK Sbjct: 193 YKTAFYTFYMPVACAMLLRGLNDSELDQIARSYCIEIGIYFQIQDDFLDCYGDPAIIGK- 251 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI---SVENLKKAFIIMRENRALV 281 +G D + K T V+ A + +K K N G+ S+E +K + N + Sbjct: 252 VGTDIQENKCTWLVVQACIKSNHEQKKLLKE--NYGRSDSQSIEQIKNLY-----NELKL 304 Query: 282 DTEYRAYSYGQKAKDSL 298 + Y+ Y QKA S+ Sbjct: 305 PSTYKEYE--QKAYHSI 319 >gi|62959201|gb|AAY23708.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-310] Length = 145 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 10/143 (6%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 HDD+ +DD +R GK + T+VL GD L + AF ++ + + + + Sbjct: 1 HDDLPGMDDDEMRHGKPTLHKAFDEATAVLAGDSLHALAFDILTQPDTSTDPFVRAELVA 60 Query: 139 TLAEGELRQ-LSLSKNLDVTEEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSV 190 TLA ++ + +D+ E+ + ++ KT L +A++E+ +++ V Sbjct: 61 TLARASGHDGMAGGQMMDIVSEEQSYDLRQVTRLQQLKTGALLAASVEMGAVLGRVAPEG 120 Query: 191 RQALKSYGMNLGIAFQLVDDVLD 213 R L++Y ++G+AFQ+ DD+LD Sbjct: 121 RTHLRAYARDIGLAFQIADDILD 143 >gi|242015532|ref|XP_002428407.1| farnesyl-pyrophosphate synthetase, putative [Pediculus humanus corporis] gi|212513019|gb|EEB15669.1| farnesyl-pyrophosphate synthetase, putative [Pediculus humanus corporis] Length = 403 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 16/199 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 ++ IE + L+ DD++D+S RRG+ L T L LL + V++ Sbjct: 137 IMGWCIEILQAKLLIADDIMDNSLTRRGRPCWYLTHDLGTKALNDALLLGGSLFQVLKMY 196 Query: 126 SQEA---LEALSLVACTLAEGELRQ-------LSLSKNLD-VTEEDYLHVIKSKTAVL-F 173 ++ + L L + + L Q L +SK+L+ T Y + K KT+ F Sbjct: 197 FKDKSYYINILELFHDVMLKTFLGQHLDTHTSLDISKDLNKFTMARYNLICKYKTSYYSF 256 Query: 174 SAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + + +AG+ + RQA K+ + +G FQ+ DD LD G+ + MGK+ G D ++ Sbjct: 257 VLPIAAAMFMAGIDDHELHRQA-KTILLEMGHFFQVQDDYLDCFGDPDVMGKH-GTDIQD 314 Query: 232 GKPTLPVILAFQRGTKREK 250 GK T ++A QR K+++ Sbjct: 315 GKCTWLAVVALQRINKKQR 333 >gi|59709769|gb|AAW88510.1| geranylgeranyl diphosphate synthase [Neotyphodium lolii] gi|59709775|gb|AAW88514.1| geranylgeranyl diphosphate synthase [Epichloe festucae] Length = 334 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 9/207 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL K +R LT A L + +++ I+ +H A+LL DD+ D S LRRG Sbjct: 46 YLRALPSKDIRSGLTDAINEFLRVPEEKVLVIKRIIDLLHNASLLIDDIQDSSKLRRGVP 105 Query: 96 AARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 A ++G ++ + + ++Q + A+ L+ L G+ +L ++ Sbjct: 106 VAHHIFGIAQTINSANLAYFIAQRELEKLTNPRAFAIYNEELI--NLHRGQGMELHWRES 163 Query: 154 LDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 L TE++YL +I+ KT LF A+ L+ G +++ S LG FQ+ DD Sbjct: 164 LHCPTEDEYLRMIQKKTGGLFRLAIR---LLQG-ESASDDDYVSLIDTLGTLFQIRDDYQ 219 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + ++ K ED GK + PVI Sbjct: 220 NLQSDIYSKNKGYCEDLTEGKFSYPVI 246 >gi|121715892|ref|XP_001275555.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1] gi|119403712|gb|EAW14129.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1] Length = 700 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 4/193 (2%) Query: 62 DNHVLLACAIE-FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H+ + I + +TLL DD+ D SALRRG+ AA + +G +V FL ++A + Sbjct: 441 DEHIAILTKIAVMLFNSTLLLDDIEDGSALRRGQPAAHVKFGVGQTVNSATFLHAEAVSL 500 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEV 179 V+E + L + TLA G+ L + T +YL ++ KT F L Sbjct: 501 VLEHLGPDCLNIVLDEIKTLARGQALDLHWTFIQARPTVNEYLTMVDHKTGGFFRLVLRA 560 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++ +V L+ +G +Q+ DD + + K +D GK + P+I Sbjct: 561 MGSLSST--AVDSDLEHLVTLMGRYYQIRDDHQNLASDEYTAKKGFCDDLSEGKFSFPII 618 Query: 240 LAFQRGTKREKNF 252 Q +K F Sbjct: 619 HLLQHSSKANTLF 631 >gi|224010788|ref|XP_002294351.1| geranylgeranyl diphosphate synthetase [Thalassiosira pseudonana CCMP1335] gi|220969846|gb|EED88185.1| geranylgeranyl diphosphate synthetase [Thalassiosira pseudonana CCMP1335] Length = 349 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 13/172 (7%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H A+LL DD+ D+S LRRG+ A ++G + + +++ A S+ A++ Sbjct: 64 LHNASLLIDDIEDNSKLRRGQPVAHSIFGVASVINTANYVYFMALERCFLLGSEGAMKVF 123 Query: 134 SLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L G+ + + TE YL ++ KT LF A+ G+ S Sbjct: 124 VSEMLNLHRGQGQDIQWRDTTTCPTESQYLAMVTDKTGGLFRLAV-------GLLQSFAT 176 Query: 193 ALKSYGM-----NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +K NLG+ FQ+ DD+++ E K+ ED GK + P+I Sbjct: 177 KMKDVDFVPLVNNLGLYFQIRDDLINLADEEYMKSKSFCEDLTEGKFSYPII 228 >gi|329904645|ref|ZP_08273892.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium IMCC9480] gi|327547880|gb|EGF32635.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium IMCC9480] Length = 281 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 46/86 (53%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 + + + SGG+R+R L L A L D+ V +A +E +H A+L+HDD+ D RR Sbjct: 31 ALSHHLDSGGQRVRARLALYAAQALHLSDDDAVTIAVTVELLHNASLIHDDLQDRDVQRR 90 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAF 118 G +G ++ GD LLS A+ Sbjct: 91 GCATLWSAFGENVAICAGDLLLSAAY 116 >gi|322710216|gb|EFZ01791.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae ARSEF 23] Length = 431 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 5/231 (2%) Query: 11 DMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 + E +NF + D E ++ +Y+ GK R L A +L+ ++ Sbjct: 122 EHEDLNFTPKRSWTDDKEKVVRAPFEYVASHPGKDFRSQLINAFNALLQVPPSRLDIITK 181 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+ +H ++LL DDV D S LRRG A ++G ++ +++ A + + + Sbjct: 182 AVGMLHESSLLVDDVQDSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPSI 241 Query: 130 LEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + +L G+ L L TE+DYL ++ +KT LF +++ + A + Sbjct: 242 ISVFADELVSLHRGQGMDLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIKL--MQAESPS 299 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S + + +G+ FQ+ DD ++ K + ED GK + PVI Sbjct: 300 SSLDCVPLVNL-IGLIFQIRDDYMNLSSREYSDNKGLCEDLTEGKFSFPVI 349 >gi|296818379|ref|XP_002849526.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480] gi|238839979|gb|EEQ29641.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480] Length = 366 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 6/219 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK +R L A + L+ ++ ++A I H A+L+ DD+ D+S LRRG Sbjct: 82 YIAALPGKEIRRKLLDAFNVWLKVDEESCEIIARTITMAHNASLMIDDIQDNSQLRRGVP 141 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKS-QEALEALSLVACTLAEGELRQLSLSKNL 154 A V+G ++ +++ QA ++ K+ +AL + L G+ +L N Sbjct: 142 TAHRVYGIAQTINAANYVYFQAQQELMRLKNWPQALAIFNDELINLHRGQGMELFWRDNF 201 Query: 155 DVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 E DYL +I +KT LF L L+ V + +G+ FQ++DD + Sbjct: 202 QPPSEGDYLQMIANKTGGLFRLILR---LLQCASTRVVD-ITPLANVVGLFFQILDDYKN 257 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 + K +D GK + P+ A + R+ + Sbjct: 258 MVDDKMAAQKGYCDDLTEGKFSFPICHAIWTESSRKDDI 296 >gi|42520989|ref|NP_966904.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410730|gb|AAS14838.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 335 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 12/107 (11%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y++ + K +R L +A++ + + +A AIEF+H +L+HDD+ +D+S Sbjct: 29 AMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEFVHAYSLIHDDLPCMDNSDT 88 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127 RR +++ + T+VL GD LL+ AF C +I+ SQ Sbjct: 89 RRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEKRCEIIKVLSQ 135 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 5/70 (7%) Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE-----VNEMG 222 KTA LF+A+ E+ ++I G + R+AL +YG+NLG+ FQ DD+ DY + ++ +G Sbjct: 236 KTAKLFAASCEIGAIIGGATDKQRKALYNYGINLGLIFQAKDDIEDYEQDKTNNLMSVLG 295 Query: 223 KNIGEDFRNG 232 K+ ED+ +G Sbjct: 296 KSEVEDYIDG 305 >gi|328863742|gb|EGG12841.1| hypothetical protein MELLADRAFT_87140 [Melampsora larici-populina 98AG31] Length = 331 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 18/230 (7%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 SD +++ + YL + K L M+T A + ++ + IH A LL DD+ Sbjct: 20 SDQKIMLEPYTYLGINTAKELPSMVTKALNHWYQVPQPALDIVLQIVGPIHAACLLIDDI 79 Query: 85 VDDSALRRGKVAARLVWG-----NQTSV--LVGDFLLSQAFCMVIE----TKSQEALEAL 133 DDS LR G A V+G N +V L+ ++ A+ + E KS E ++ Sbjct: 80 QDDSDLRGGNPVAHKVYGVAQTINTATVTTLLLSYVCFDAYHKISELRPFLKSPETIDLW 139 Query: 134 SLV---ACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 S++ L G+ L +L TEE+YL +I +KT +F + + ++ V +S Sbjct: 140 SIINDEIAALHRGQWIDLYWRDSLICPTEEEYLRMIHNKTGAIFRLPMRLLQALSPV-DS 198 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 V + +GI Q+ +D+L + + K EDF GK + P+I Sbjct: 199 VPDCFPLVNI-VGILVQIRNDLLSLSADFTK-DKGFCEDFSEGKFSFPII 246 >gi|21218742|ref|NP_624521.1| geranylgeranyl pyrophosphate synthase [Streptomyces coelicolor A3(2)] gi|5748647|emb|CAB53152.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces coelicolor A3(2)] Length = 392 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 45/239 (18%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDD 87 + D + L GGKRLR GD +L A+E + L+HDDV+D Sbjct: 65 LADRLAALTARGGKRLRTAFAHCGWRAAGGSGDATAVLRTGAALELLQACALVHDDVMDG 124 Query: 88 SALRRGKVA-----ARLVW-----------GNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 S RRG A AR W G +VL GD L+ A ++ ET Sbjct: 125 SVQRRGAPALHVDLARGHWAAGMHGSSESFGTSAAVLTGDLALAWADDLLTET------- 177 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 AL GE R ++ + + LH ++++ + AL +++L + + R Sbjct: 178 ALGTPHGPRLHGEWR--AMRTEMVAGQYRDLHAQAARSSGV-DEALAIATLKSALYTVAR 234 Query: 192 -----------------QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 +AL++ G G+AFQL DD+L G+ GK +D R+ K Sbjct: 235 PLALGAVLAGAADGDALEALRAAGRCAGLAFQLRDDLLGAFGDPALTGKPADDDLRSRK 293 >gi|289774146|ref|ZP_06533524.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24] gi|289704345|gb|EFD71774.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24] Length = 392 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 45/239 (18%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDD 87 + D + L GGKRLR GD +L A+E + L+HDDV+D Sbjct: 65 LADRLAALTARGGKRLRTAFAHCGWRAAGGSGDATAVLRTGAALELLQACALVHDDVMDG 124 Query: 88 SALRRGKVA-----ARLVW-----------GNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 S RRG A AR W G +VL GD L+ A ++ ET Sbjct: 125 SVQRRGAPALHVDLARGHWAAGMHGSSESFGTSAAVLTGDLALAWADDLLTET------- 177 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 AL GE R ++ + + LH ++++ + AL +++L + + R Sbjct: 178 ALGTPHGPRLHGEWR--AMRTEMVAGQYRDLHAQAARSSGV-DEALAIATLKSALYTVAR 234 Query: 192 -----------------QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 +AL++ G G+AFQL DD+L G+ GK +D R+ K Sbjct: 235 PLALGAVLAGAADGDALEALRAAGRCAGLAFQLRDDLLGAFGDPALTGKPADDDLRSRK 293 >gi|256074738|ref|XP_002573680.1| geranylgeranyl pyrophosphate synthase [Schistosoma mansoni] gi|238658865|emb|CAZ29912.1| geranylgeranyl pyrophosphate synthase, putative [Schistosoma mansoni] Length = 338 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 13/211 (6%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ + GK +R L A L+ +++ I+ +H A+L+ DD+ D S LRRGK Sbjct: 24 YICSTNGKGIRSALVAAFNYWLKVPESILRVISDVIQMLHNASLIIDDIEDGSHLRRGKP 83 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVACTLAEGELRQLSLS 151 A ++G S+ ++ A+ + +E S E ++ + L G+ + Sbjct: 84 TAHCIFGVAPSINSANY----AYFLALEKLSLLERPETVKIFTEQMLVLHRGQGMDIFWR 139 Query: 152 KNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + +E +Y ++ KT LFS + + L + Q + L + +G+ +Q+ DD Sbjct: 140 SSFKCPSESEYEAMVLCKTGGLFSLGVRLMQLFSENQTDYKPLLDA----IGLFYQIRDD 195 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + K ED GK + P++ A Sbjct: 196 YANLVDSSYHRKKTFAEDLTEGKFSYPIVRA 226 >gi|115523345|ref|YP_780256.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53] gi|115517292|gb|ABJ05276.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53] Length = 288 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 15/212 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDV--VDDS 88 + ++Y +F G R+RP L + A E A+E +H A+L+HDD+ D + Sbjct: 29 EAMRYSVFPRGARVRPRLCHSVAAACGEDNPAATEAAGAALELMHCASLVHDDLPCFDGA 88 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL 148 RRG+ + +G +VL GD L+ AF +T ++ + L+ T+ GE + Sbjct: 89 DTRRGRPSVHKTFGEPLAVLTGDALIVLAF----QTIARVDCDPARLLKLTMTVGEAVGV 144 Query: 149 SLS----KNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + + E + H +SKT LF + ++ A + + G +G Sbjct: 145 PFGIVAGQAWECESEINLAHYHRSKTGALF---VAATAAGAASAGADPAPWRLVGEKIGE 201 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A+Q+ DD+ D + E+GK +G+D N +P+ Sbjct: 202 AYQVADDLRDAAADEEEIGKPVGQDIANDRPS 233 >gi|99035065|ref|ZP_01314856.1| hypothetical protein Wendoof_01000303 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 335 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 12/107 (11%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++Y++ + K +R L +A++ + + +A AIEF+H +L+HDD+ +D+S Sbjct: 29 AMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEFVHAYSLIHDDLPCMDNSDT 88 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAF----------CMVIETKSQ 127 RR +++ + T+VL GD LL+ AF C +I+ SQ Sbjct: 89 RRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEKRCEIIKVLSQ 135 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 5/70 (7%) Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE-----VNEMG 222 KTA LF+A+ E+ ++I G + R+AL +YG+NLG+ FQ DD+ DY + ++ +G Sbjct: 236 KTAKLFAASCEIGAIIGGATDKQRKALYNYGINLGLIFQAKDDIEDYEQDKTNNLMSVLG 295 Query: 223 KNIGEDFRNG 232 K+ ED+ +G Sbjct: 296 KSEVEDYIDG 305 >gi|256790271|ref|ZP_05528702.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24] Length = 375 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 98/241 (40%), Gaps = 45/241 (18%) Query: 30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDD 87 + D + L GGKRLR GD +L A+E + L+HDDV+D Sbjct: 48 LADRLAALTARGGKRLRTAFAHCGWRAAGGSGDATAVLRTGAALELLQACALVHDDVMDG 107 Query: 88 SALRRGKVA-----ARLVW-----------GNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 S RRG A AR W G +VL GD L+ A ++ ET Sbjct: 108 SVQRRGAPALHVDLARGHWAAGMHGSSESFGTSAAVLTGDLALAWADDLLTET------- 160 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 AL GE R ++ + + LH ++++ + AL +++L + + R Sbjct: 161 ALGTPHGPRLHGEWR--AMRTEMVAGQYRDLHAQAARSSGV-DEALAIATLKSALYTVAR 217 Query: 192 -----------------QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 +AL++ G G+AFQL DD+L G+ GK +D R+ K Sbjct: 218 PLALGAVLAGAADGDALEALRAAGRCAGLAFQLRDDLLGAFGDPALTGKPADDDLRSRKL 277 Query: 235 T 235 T Sbjct: 278 T 278 >gi|28493184|ref|NP_787345.1| geranylgeranyl pyrophosphate synthase [Tropheryma whipplei str. Twist] gi|28476225|gb|AAO44314.1| geranylgeranyl pyrophosphate synthase [Tropheryma whipplei str. Twist] Length = 379 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 49/276 (17%) Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIE 72 F++ + E + D ++ F GGKRLR L A + +N L A AIE Sbjct: 39 FILNNKTSKHTESMYDYLQDFTF-GGKRLRAKLCFTGAECIGPIPENLFELISDIAVAIE 97 Query: 73 FIHTATLLHDDVVDDSALRRG--KVAARLV--------------WGNQTSVLVGDFLL-- 114 H A L+HDD++D S RRG V R +G +++L GD LL Sbjct: 98 LFHAAALVHDDLIDKSDSRRGLPAVHKRFAKFHEENSFVKCKENFGTASAILAGDMLLVW 157 Query: 115 -----SQAFCMVIETKSQEA----LEALSLVAC-------------TLAEGELRQLSLSK 152 A ++ T +++A L+ ++++ L E RQLS+ + Sbjct: 158 SSRFFYSALNNLLNTTAKQASDFHLDTMNILWHEMQNEVVIGQYMDVLHEHRWRQLSVQE 217 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 LD+++E +IK L + + G + LK + + +G+AFQ+ +D+ Sbjct: 218 ALDISKEI---MIKKSGKYSVQVPLCLGANTNGATIEHLEVLKRFSLPIGLAFQMRNDI- 273 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 D +++ D + K T+ + LA TK Sbjct: 274 DGAFANDKITGKPSSDLSSAKHTMLIGLARIHSTKH 309 >gi|167045407|gb|ABZ10062.1| hypothetical protein ALOHA_HF4000APKG10F15ctg4g8 [uncultured marine crenarchaeote HF4000_APKG10F15] Length = 100 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 +KY + GGKR+RP++ L + + DN ACAIEF+HT +++HDD++D+ +RR Sbjct: 32 LKYAL-GGGKRIRPIILLLASECVGEIDDNTFAAACAIEFLHTESVIHDDIIDNETIRRQ 90 Query: 94 KVAARLVWG 102 K + +G Sbjct: 91 KDPFHIKYG 99 >gi|156098771|ref|XP_001615401.1| farnesyl pyrophosphate synthase [Plasmodium vivax SaI-1] gi|148804275|gb|EDL45674.1| farnesyl pyrophosphate synthase, putative [Plasmodium vivax] Length = 375 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 65/305 (21%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHV---------LLACAIEFIHTATLLHDDVVDDSALR 91 GGK R +L + L+ EY + + LA IE + A L+ DD++D R Sbjct: 58 GGKNNRGILVI---LIYEYVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGETR 114 Query: 92 RGKVAARLVWGNQTSVLVGDFLL---------------SQAFCMVIETKSQEALEAL--- 133 R K L+ +T V D LL + VI T L+ + Sbjct: 115 RNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQ 174 Query: 134 ----SLVACTLAEGELRQLSLSKNLDVTEED-----------YLHVIKSKTAVL-FSAAL 177 ++ + ++ R++ ++ N++V E+ Y +++ KTA F + Sbjct: 175 HLDTNIFSDKYSDAH-REIDVN-NINVPEQPVININMINFGVYKNIVIHKTAYYSFFLPI 232 Query: 178 EVSSLIAG--VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L+AG V N + + ++ M +G FQ+ DD LD G+ + GK +G D +N K T Sbjct: 233 VCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIHDDYLDIFGDSTKTGK-VGSDIQNNKLT 291 Query: 236 LPVILAFQRGTKRE-----KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290 P+I F+ ++ + KN+ K+ + K+ +++L + + I + Y +Y Sbjct: 292 WPLIKTFELCSEPDKIKIVKNYGKNNLACVKV-IDSLYEQYKIRK--------HYESYEK 342 Query: 291 GQKAK 295 QKAK Sbjct: 343 AQKAK 347 >gi|163795411|ref|ZP_02189378.1| geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] gi|159179397|gb|EDP63928.1| geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] Length = 294 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 4/214 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM ++ + KV LI + + +V+ +GG R+R + L L Sbjct: 11 KMTDNELASLLTKVEALIDTLCTGEPGSLAGIVRNHFSAGGSRVRARIALQAGSALGLSQ 70 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 V LA E +H A+L+HDD+ D +RR + L G ++ GD +LS A+ + Sbjct: 71 TICVALASGCELLHNASLVHDDLQDRDGMRRNAPSMWLAHGEAIAICAGDLMLSSAYAAL 130 Query: 122 IETKSQEA--LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + A + + L + G+ L L + E Y + +K+ L + LE+ Sbjct: 131 AQAGPKAASMITHVHLRVAHVISGQCEDLRLGGTCN-DPEAYEQIAAAKSGPLLALPLEL 189 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 + + AG + + A ++ + IA+Q++DD+ D Sbjct: 190 ALIAAGREPLLGAASRAATL-FAIAYQMLDDLGD 222 >gi|125977318|ref|XP_001352692.1| GA21189 [Drosophila pseudoobscura pseudoobscura] gi|195174424|ref|XP_002027974.1| GL21354 [Drosophila persimilis] gi|54641441|gb|EAL30191.1| GA21189 [Drosophila pseudoobscura pseudoobscura] gi|194115684|gb|EDW37727.1| GL21354 [Drosophila persimilis] Length = 339 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 6/224 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ Y+ GK+ R L LA L + + ++ +H ++LL DD+ D+ Sbjct: 22 EILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLAQIGDIVQMLHNSSLLIDDIEDN 81 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ L A V EA + + L G+ + Sbjct: 82 SILRRGVPVAHSIYGVASTINAANYALFLALEKVQLLGHPEATKVYTEQLLELHRGQGME 141 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + +E DY + KT LF A+ + L + + ++ LG+ FQ Sbjct: 142 IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS----ANKEDYSKLTAILGLYFQ 197 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD + + K+ ED GK PVI A R K++K Sbjct: 198 IRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV-RSQKQDK 240 >gi|28572702|ref|NP_789482.1| polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27] gi|28410834|emb|CAD67220.1| putative polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27] Length = 354 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 49/276 (17%) Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL----ACAIE 72 F++ + E + D ++ F GGKRLR L A + +N L A AIE Sbjct: 14 FILNNKTSKHTESMYDYLQDFTF-GGKRLRAKLCFTGAECIGPIPENLFELISDIAVAIE 72 Query: 73 FIHTATLLHDDVVDDSALRRG--KVAARLV--------------WGNQTSVLVGDFLL-- 114 H A L+HDD++D S RRG V R +G +++L GD LL Sbjct: 73 LFHAAALVHDDLIDKSDSRRGLPAVHKRFAKFHEENSFVKCKENFGTASAILAGDMLLVW 132 Query: 115 -----SQAFCMVIETKSQEA----LEALSLVAC-------------TLAEGELRQLSLSK 152 A ++ T +++A L+ ++++ L E RQLS+ + Sbjct: 133 SSRFFYSALNNLLNTTAKQASDFHLDTMNILWHEMQNEVVIGQYMDVLHEHRWRQLSVQE 192 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 LD+++E +IK L + + G + LK + + +G+AFQ+ +D+ Sbjct: 193 ALDISKEI---MIKKSGKYSVQVPLCLGANTNGATIEHLEVLKRFSLPIGLAFQMRNDI- 248 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 D +++ D + K T+ + LA TK Sbjct: 249 DGAFANDKITGKPSSDLSSAKHTMLIGLARIHSTKH 284 >gi|209870011|ref|NP_001119633.3| mitochondrial isoprenyl diphosphate synthase [Acyrthosiphon pisum] Length = 394 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 38/253 (15%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHT 76 +PDV K+L GGK+ R + + + ML D +L +E + Sbjct: 78 VPDVTKWLAKLLQYNVPGGKKNRGLALVLSYKMLSSPADQTDENIRLSYILGWCVEILQA 137 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEA--- 129 L+ DD++D++ RRG R W + V D LL Q+ +I+ ++ Sbjct: 138 YQLVLDDIMDNAITRRG----RPCWYRHNDIGLMAVNDGVLLEQSIYQLIKKYFKDKPYY 193 Query: 130 ---LEALSLVACTLAEGE-LRQLSL----SKNLD-VTEEDYLHVIKSKTAVL-FSAALEV 179 LE V + G+ L L+ SK L+ T E+Y ++K KTA F + + Sbjct: 194 THILELFYDVTMKTSMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVCL 253 Query: 180 SSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + + + RQA K+ + +G FQ+ DD LD G+ + MGK IG D +GK + Sbjct: 254 AMRMTNINDPEIFRQA-KTILLEMGHFFQVQDDFLDCYGDPDVMGK-IGTDIEDGKCSWL 311 Query: 238 VILAFQRGTKREK 250 ++A Q+ +K Sbjct: 312 AVVALQKVNSEQK 324 >gi|116179884|ref|XP_001219791.1| hypothetical protein CHGG_00570 [Chaetomium globosum CBS 148.51] gi|88184867|gb|EAQ92335.1| hypothetical protein CHGG_00570 [Chaetomium globosum CBS 148.51] Length = 352 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 17/147 (11%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL GK R L A LE ++ ++ + +HTA+LL DDV D+S LRRG Sbjct: 186 YLNGHPGKDFRSALVKAFDAWLEVPPESLEVITKVVGMLHTASLLVDDVEDNSQLRRGYP 245 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ FC + E + + +A+S+ A EL L + +D Sbjct: 246 VAHAIFGIPQTINSSNYIY---FCALQELQKLKNPKAVSIFA-----EELVNLHRGQGMD 297 Query: 156 V---------TEEDYLHVIKSKTAVLF 173 + TE+DYL ++ +KT LF Sbjct: 298 LFWRDTLTCPTEDDYLEMVSNKTGGLF 324 >gi|312381025|gb|EFR26873.1| hypothetical protein AND_06760 [Anopheles darlingi] Length = 479 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---- 122 L IE +H+ L+ DD++D SA+RRG+ A + + + ++ A VI Sbjct: 217 LGWCIEMLHSMFLMIDDIMDGSAMRRGQPAWHTLDDVKMVAINDGIMIDAAIFYVIKKHF 276 Query: 123 --ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE---EDYLHVIKSKTAVL-FSAA 176 E LE S + G+ L LS +DVT+ + Y ++ KTA F Sbjct: 277 GNEPYYARLLEEFSEIKFITTIGQSLDL-LSAKMDVTQYTMDVYKSIVFHKTAYYTFYLP 335 Query: 177 LEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + ++ + G + RQA K+ + +G +Q DD LD G+ +GK +G D GK Sbjct: 336 VAMAMHMTGYTDPEMFRQA-KTILLEIGQFYQAQDDFLDCFGDPAVIGK-VGTDIAEGKC 393 Query: 235 TLPVILAFQRGTKREKNFWK 254 + ++A QR T+ +K K Sbjct: 394 SWLAVVAMQRATEEQKEVMK 413 >gi|228470131|ref|ZP_04055040.1| polyprenyl synthetase [Porphyromonas uenonis 60-3] gi|228308269|gb|EEK17124.1| polyprenyl synthetase [Porphyromonas uenonis 60-3] Length = 87 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 34/86 (39%), Positives = 47/86 (54%) Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 +RP+L L L V A A+E H TLLHDDV+D+S +RRGK + +G Sbjct: 1 MRPVLALLMQAFLRLDAPLVVSPAVALEVFHNFTLLHDDVMDNSPVRRGKPSVYAKYGLT 60 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEAL 130 ++L GD +L A+ M+ E S E L Sbjct: 61 PAILSGDAMLILAYQMLTEDVSPEML 86 >gi|238499299|ref|XP_002380884.1| geranyl geranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] gi|220692637|gb|EED48983.1| geranyl geranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] Length = 273 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 15/214 (7%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL + GK +R L A LE D ++ I+ +H A+LL DD+ D S LRRG Sbjct: 10 YLRENLGKDIRSKLIDAFNEFLEVPNDKLDVIKRIIDLLHNASLLIDDIQDSSTLRRGVP 69 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT-----LAEGELRQLSL 150 A ++G +V L+ V + + LSL T L G+ +L Sbjct: 70 VAHSIFG-----VVQIINLANYAYFVAQRELTNLTNPLSLSIYTEELLHLHRGQGMELHW 124 Query: 151 SKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 L +EE+Y+ + KT LF A+ + + +++ LG+ FQ+ D Sbjct: 125 RDTLQCPSEEEYIEMALDKTGGLFRLAIRLMQAESASGTDYVPLVET----LGLLFQIRD 180 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 D + + + K ED GK + P+IL+ + Sbjct: 181 DYQNLQSDTYSTNKGFCEDIGEGKFSYPIILSIR 214 >gi|294669816|ref|ZP_06734875.1| hypothetical protein NEIELOOT_01709 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308209|gb|EFE49452.1| hypothetical protein NEIELOOT_01709 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 122 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 6/91 (6%) Query: 18 LILKRICSDVEMIP----DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 L+L R+ +P + ++Y GGKRLRP+L LA + + E D AIE Sbjct: 19 LLLARLMPSENQLPQSLHETMRYAALDGGKRLRPLLVLAASELGEAVPDAVEAAMAAIEL 78 Query: 74 IHTATLLHDDV--VDDSALRRGKVAARLVWG 102 IH +L+HDD+ +D+ +LRRG+ + +G Sbjct: 79 IHVYSLVHDDMPAMDNDSLRRGRPTCHIRYG 109 >gi|159125895|gb|EDP51011.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus fumigatus A1163] Length = 452 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 19/218 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVVDDSA 89 D V Y+ K +R L AL L ++ +H++ + ++ +H +TL+ DD+ D S Sbjct: 210 DPVHYIQSLPSKNMR--TKLVDALNLWFQLPHHLVDTVKGTVDDLHNSTLILDDIQDSSY 267 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG A V+G+ + +LL QA + Q V +G L++LS Sbjct: 268 LRRGFAATHHVFGSAQCINSATYLLVQAASRLSVHNEQ-----YPAVITVFLDG-LKELS 321 Query: 150 LSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 L ++ D+ + E+Y+ ++ KT V+F + + + Q L Sbjct: 322 LGQSWDLNWRSTGYCPSTEEYMAMVDGKTGVMFDMIVRMMHCFSSSQTVPVSELSQLTQL 381 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 LG +Q+ DD + + K ED GK + P+ Sbjct: 382 LGRWYQVRDDYQNLQDAQYTAQKGFCEDLDEGKLSYPL 419 >gi|163785166|ref|ZP_02179857.1| Polyprenyl synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159879568|gb|EDP73381.1| Polyprenyl synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 111 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 9/83 (10%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH----VLLACAIEFIHTATLLHDDV--V 85 D + Y + +GGKR+RP+L L +A G N+ + +A A+E IHT +L+HDD+ + Sbjct: 32 DAMHYSLNAGGKRIRPVLVLESAKAC---GKNNLEGIIDIALAVEIIHTYSLIHDDLPSM 88 Query: 86 DDSALRRGKVAARLVWGNQTSVL 108 D+ LRRGK V+G ++L Sbjct: 89 DNDDLRRGKPTCHKVYGEAVAIL 111 >gi|262195439|ref|YP_003266648.1| polyprenyl synthetase [Haliangium ochraceum DSM 14365] gi|262078786|gb|ACY14755.1| Polyprenyl synthetase [Haliangium ochraceum DSM 14365] Length = 348 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 94/183 (51%), Gaps = 18/183 (9%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IET 124 L +E +H +L+ DD+ D S+ RRG A ++G ++ G+++ ++ ++ Sbjct: 84 LPLVVELLHAGSLIVDDIEDGSSTRRGGPALHHLYGTSIALNTGNWMYFWPLTLIDRLDQ 143 Query: 125 KSQEALEA-----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK----SKTAVLFSA 175 S+ + E +LV C +G+ L+L K ++ + + HV++ SKT+ L S Sbjct: 144 SSERSAEMHRRTRQTLVLCH--QGQALDLAL-KVTELEQSEVPHVVRATTRSKTSALMSL 200 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG-EDFRNGKP 234 A + ++ AG ++ V A+ +G LG+ Q++DD+ ++ ++ G ED R +P Sbjct: 201 AAALGAIAAGAESRVLDAVTRFGTELGVGLQMLDDLGSL---ASDSRRHKGREDLRLARP 257 Query: 235 TLP 237 T P Sbjct: 258 TWP 260 >gi|134300028|ref|YP_001113524.1| geranylgeranyl pyrophosphate synthase-like protein [Desulfotomaculum reducens MI-1] gi|134052728|gb|ABO50699.1| Geranylgeranyl pyrophosphate synthase-like protein [Desulfotomaculum reducens MI-1] Length = 162 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 7/65 (10%) Query: 37 LIFSGGKRLRPMLTLATALMLEYRG--DNHVL-LACAIEFIHTATLLHDDVVDDSALRRG 93 LI +GGKR+RP L L + +G + V+ LA A+E +H ATL HDD++D++A RRG Sbjct: 50 LIIAGGKRIRPALVL----LAGKQGLVNKQVMQLAIAVEILHLATLTHDDIIDNAATRRG 105 Query: 94 KVAAR 98 K AA Sbjct: 106 KPAAH 110 >gi|169139097|gb|ACA48701.1| farnesyl diphosphate synthase 1 [Myzus persicae] Length = 394 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 38/253 (15%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHT 76 +PDV K+ GGK+ R + + + ML D +L +E + Sbjct: 78 VPDVTKWPAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQA 137 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEA--- 129 L+ DD++D++ RRG R W + V D LL QA +I+ ++ Sbjct: 138 YQLVLDDIMDNAITRRG----RPCWYRHNDIGLMAVNDGVLLEQAIYQLIKKYFKDKPYY 193 Query: 130 ---LEALSLVACTLAEGE-LRQLSL----SKNLD-VTEEDYLHVIKSKTAVL-FSAALEV 179 LE V A G+ L L+ SK L+ T E+Y ++K KTA F + + Sbjct: 194 THILELFFDVTMKTAMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVCL 253 Query: 180 SSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + + + RQA K+ + +G FQ+ DD LD G+ + MGK IG D +GK + Sbjct: 254 AMRMTNINDPEIFRQA-KTILLEMGHFFQVQDDFLDCYGDPDVMGK-IGTDIEDGKCSWL 311 Query: 238 VILAFQRGTKREK 250 ++A Q+ +K Sbjct: 312 AVVALQKVNSEQK 324 >gi|213422747|ref|ZP_03355795.1| hypothetical protein Salmonentericaenterica_35292 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 99 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 44/65 (67%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 35 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 94 Query: 61 GDNHV 65 G+ HV Sbjct: 95 GNAHV 99 >gi|119579179|gb|EAW58775.1| hCG2042152 [Homo sapiens] Length = 318 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 85/220 (38%), Gaps = 56/220 (25%) Query: 32 DVVKYLIFSGGKRLRPMLT--LATALMLEYRGDNHV-----LLACAIEFIHTATLLHDDV 84 ++ +Y GK R ++ +A A + + HV A E IHTA+L+HDDV Sbjct: 77 EISEYYFDVKGKAFRSIIVVLMARACNIHHNNSRHVQASQRATALIAEMIHTASLVHDDV 136 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 +D++ R+GK T +G E E Sbjct: 137 IDNARSRKGK---------HTRSGLGS-----------------------------KENE 158 Query: 145 LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 + + YL TA L + + + S++ V + YG N+GIA Sbjct: 159 HERFA----------QYLEKTFKNTASLIANSCKAVSVLGCPDPVVHEITYQYGKNVGIA 208 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 FQL+DDV D+ N +GK D T PV+ A Q+ Sbjct: 209 FQLIDDVFDFTSCSN-IGKPTSADVNLRLATGPVLFACQQ 247 >gi|330444019|ref|YP_004377005.1| geranyl transtransferase [Chlamydophila pecorum E58] gi|328807129|gb|AEB41302.1| geranyl transtransferase [Chlamydophila pecorum E58] Length = 293 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 24/211 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL---ACAIEFIHTATLLHDDV--VDDS 88 V+Y + +GGKR+RP+L ML + H + A A+EF HT+TL+ DD+ +D+ Sbjct: 36 VEYALKTGGKRIRPLLVC----MLAHGIGKHCDVMDSALAVEFAHTSTLIADDLPCMDND 91 Query: 89 ALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACTLAEG 143 RRG+ V+G ++L L+ A+ + K +A+ + + E Sbjct: 92 DERRGRPTVHKVFGEALALLASYALIPAAYSHFHKNAKKLKKQGYNPQAIDVAYDIILEV 151 Query: 144 ELRQLSLSKNLDVTEEDYL-------HV---IKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 R + + L +D HV + KT LF A L G ++ Sbjct: 152 TNRNIGCAGVLGGQYDDMFFSNKGREHVQSIMVKKTGALFEIASVSGWLFGGGSPNLLPQ 211 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + + + G+ FQ+ DD LDY + +G N Sbjct: 212 IIEFSRHFGLLFQIKDDFLDYEKDREHIGLN 242 >gi|119713780|gb|ABL97828.1| crtE geranylgeranyl diphosphate synthase [uncultured marine bacterium HF10_49E08] Length = 303 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 12/220 (5%) Query: 29 MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVD 86 ++ D V+ F G+++R + LA Y D +LL A + +H A+L+HDD++D Sbjct: 24 ILKDFVEDPYFWSGQKIRAKICLAVGK--SYGLDEDLLLDIAAFTDLLHNASLIHDDLID 81 Query: 87 DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA-----LEALSLVACTLA 141 D A RRG +G ++L+GD L++++ + K+ +S + Sbjct: 82 DDAERRGYATPWKKYGKDKALLLGDLLIAKSLTVSAGMKADSVDKLAWASEISNCVTSAV 141 Query: 142 EGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G ++L S+ D +Y + + KT VLF+ ++ A ++ + N Sbjct: 142 RGAFKELDFVSQTSDDIISNYTQMSRDKTGVLFALPARCVAIAARKNQLCLDSITNIFTN 201 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + IA+Q+ DD DY G + G+ D +N +P L +L Sbjct: 202 MAIAYQIRDDQADYLGI--KKGRKSLSDLKNNRPNLYYLL 239 >gi|194752870|ref|XP_001958742.1| GF12410 [Drosophila ananassae] gi|190620040|gb|EDV35564.1| GF12410 [Drosophila ananassae] Length = 417 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 13/195 (6%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 L +E + + ++ DDV+D+S RRG++ V G + + ++ A +++ Sbjct: 155 LGWCVEMLQSFFIISDDVMDNSTTRRGQLCWHKVEGVGLTAINDALMIENAMYAILKKHF 214 Query: 127 QE-----ALEAL--SLVACTLAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVL-FSAAL 177 AL L + T L QL+ ++N+ + T E+Y ++++KTA F Sbjct: 215 SHLDCYVALMELFHEITYITTCGQSLDQLNSNRNVSEFTMENYKAIVENKTAYYTFYLPF 274 Query: 178 EVSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 V+ +AG ++ + RQ+ K+ + +G FQ+ DD LD G GK IG D ++ K + Sbjct: 275 AVALHLAGYKDAEAFRQS-KTILLEMGNFFQVQDDFLDCFGNPEVTGK-IGTDIQDNKCS 332 Query: 236 LPVILAFQRGTKREK 250 ++A QR +K Sbjct: 333 WLAVVAMQRANAEQK 347 >gi|260577316|ref|ZP_05845289.1| Polyprenyl synthetase [Rhodobacter sp. SW2] gi|259020497|gb|EEW23820.1| Polyprenyl synthetase [Rhodobacter sp. SW2] Length = 289 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 100/223 (44%), Gaps = 14/223 (6%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA--LRRGKVAAR 98 GGKRLR L L +A + +N V A AIE +H +L+HDD+ LRRG Sbjct: 40 GGKRLRGFLVLESARLHGIAAENAVSAAAAIEALHAYSLVHDDLPCMDDDDLRRGLPTCH 99 Query: 99 LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 + W T+VL GD L + AF ++ + L+LVA + + LD+ Sbjct: 100 VKWDEATAVLAGDALQTMAFELLCDPALGSEKARLALVASLARASGAAGMVYGQALDIAA 159 Query: 159 EDYLHVI---------KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 E + KT L S + + +L+AG + L + LG+AFQ+ D Sbjct: 160 ETASEPLTLAQITELQAGKTGALISWSAQAGALLAGADPA---PLARFATALGLAFQIAD 216 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 D+LD G+ GK +G+D GK T +L + R + Sbjct: 217 DILDVEGDAAVAGKRVGKDADAGKATFVSLLGLEGAKARARAL 259 >gi|190348241|gb|EDK40664.2| hypothetical protein PGUG_04762 [Meyerozyma guilliermondii ATCC 6260] Length = 329 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 41/262 (15%) Query: 18 LILKRICSDVEMIPDVVK----YLIFSGGKR--LRPMLTLATALMLEYRGDNHVLLACAI 71 LI I S +MIPD ++ YL G +R + + L + DNH +A Sbjct: 3 LIDTLIYSQPQMIPDAIRLPYDYLAAIPGTNGDIRTQF-IKSFNDLYFTIDNHDTIATIS 61 Query: 72 EFI---HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 E I H ++LL DD+ D S RRG AA +G +++ G+ + + + ++T Q+ Sbjct: 62 EVITVFHNSSLLIDDIEDGSEFRRGLPAAHTKYGVASTLNCGNLM----YFVALQTAQQK 117 Query: 129 ALE----------ALSLVACTLAEGELRQLSLSKNLDV------------TEEDYLHVIK 166 + ALS ++ L E EL L + LD+ + E+Y+ +I Sbjct: 118 LPQYHPSDNKNDIALS-ISNILVE-ELLNLHHGQGLDIHWRDHLKTTKLPSIEEYMEMIM 175 Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD-YRGEVNEMGKNI 225 +KT LF A+++ + Q+ + + GI FQ+ DD+++ + + M Sbjct: 176 NKTGGLFRLAVKLLGAFSTPQD--EPTVLAIANLFGIVFQIRDDLMNLVDDKYSHMKGMK 233 Query: 226 GEDFRNGKPTLPVILAFQRGTK 247 GED GK +LP++ T+ Sbjct: 234 GEDLVEGKLSLPILHCLHTSTE 255 >gi|302819273|ref|XP_002991307.1| hypothetical protein SELMODRAFT_236261 [Selaginella moellendorffii] gi|300140887|gb|EFJ07605.1| hypothetical protein SELMODRAFT_236261 [Selaginella moellendorffii] Length = 343 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 41/252 (16%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQTSVLVGDFL 113 L IE++ L+ DD++D+S RRGK VAA L+ N ++ + Sbjct: 78 LGWCIEWLQAYFLVMDDIMDNSHTRRGKPSWFKQPNVGLVAANDALLLRNHVPRILRKYF 137 Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQL--SLSKNLDVTE---EDYLHVIKSK 168 Q + + E V A G++ L S + +D+++ E YL ++K K Sbjct: 138 HGQPYYFDLR-------ELFDEVEYQTACGQMLDLITSPAGKVDLSKYVMETYLRIVKFK 190 Query: 169 TAVLFSAALEVSSLI---AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 TA +S L V+ + NS ++ K + +G FQ+ DD LD G + +GK + Sbjct: 191 TA-FYSFYLPVACALYMSGESDNSKFESAKQILLQMGTYFQIQDDFLDCYGHPDVIGK-V 248 Query: 226 GEDFRNGKPTLPVILAFQRG-----TKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280 G D ++ K + ++ A +R T+ E N+ K +E +KK + + A Sbjct: 249 GTDIQDAKCSWLIVRAIERADASQKTRLENNYGKKD----NACIEEVKKVYNDL--GLAA 302 Query: 281 VDTEYRAYSYGQ 292 +EY+ SYG+ Sbjct: 303 AFSEYQQTSYGR 314 >gi|289806033|ref|ZP_06536662.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 137 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 9/116 (7%) Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDV 211 LD E + H KT L AA+ + +L AG + + L Y ++G+AFQ+ DD+ Sbjct: 8 TLDALERIHRH----KTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDI 63 Query: 212 LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 LD G+ +GK G D + GK T P +L G ++ +N + I D + S+ L Sbjct: 64 LDVVGDTATLGKRQGADQQLGKSTYPALL----GLEQARNKARDLIEDARQSLHQL 115 >gi|119167460|gb|AAY33488.2| putative mitochondrial isoprenyl diphosphate synthase precursor [Aphis fabae] Length = 394 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 38/253 (15%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHT 76 IPDV K+L GGK+ R + + + ML D +L +E + Sbjct: 78 IPDVTKWLAKVLQYNVPGGKKNRGLALVPSFKMLSSPSDQTDENLRLSYILGWCVEILQA 137 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEA--- 129 L+ DD++D++ RRG R W + V D LL Q +I+ ++ Sbjct: 138 YQLVLDDIMDNAITRRG----RPCWYRHNDIGLMAVNDGILLEQTIYQLIKKYFKDKPYY 193 Query: 130 ---LEALSLVACTLAEGELRQLSLSKNLDV------TEEDYLHVIKSKTAVL-FSAALEV 179 LE V + G+ + + + T E+Y ++K KTA F + + Sbjct: 194 VHILELFYDVTMKTSMGQCLDMLTANSFKTKKLEKYTMENYTAIVKYKTAYYSFFLPVCL 253 Query: 180 SSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + + + RQA K+ + +G FQ+ DD LD G+ MGK IG D +GK + Sbjct: 254 AMRMTNINDPEIFRQA-KTILLEMGHFFQVQDDFLDCYGDPEVMGK-IGTDIEDGKCSWL 311 Query: 238 VILAFQRGTKREK 250 ++A Q+ +K Sbjct: 312 AVVALQKVNSEQK 324 >gi|150021241|ref|YP_001306595.1| polyprenyl synthetase [Thermosipho melanesiensis BI429] gi|149793762|gb|ABR31210.1| Polyprenyl synthetase [Thermosipho melanesiensis BI429] Length = 332 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 26/256 (10%) Query: 3 MLEDLTLKDMEKVNFLILKRI-----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 + E+ +K ++K++ I K I S V + + +K GKR+RP+L + Sbjct: 2 IFEEFRIKHVKKIDEAIGKVIDENSLNSPVGNLVEELKKFCLRPGKRIRPLLFILGVEGF 61 Query: 58 EYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ------------ 104 + D V +A IE +H+ L+HDD++D S LRRG+ + + N+ Sbjct: 62 GGKVDETVYKIAATIEIMHSFLLIHDDIMDQSELRRGQPSMHNLLANKFKDRSFNPKIGE 121 Query: 105 -TSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGELRQL--SLSKNLDVTEED 160 ++++GD L ++ LE S G++ + S+++N +E+ Sbjct: 122 DLALVLGDILFFIGLRVLSRLNIPYFFLEKFSECYINTGYGQILDVIYSMNRNYVRSEKI 181 Query: 161 YLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 L + K KTA F + ++ G N R+ ++ + GIAFQ+ DD++ E Sbjct: 182 SLEISKLKTAYYTFFYPFYLGTVFTG-GNVGRKLIEDIMIPAGIAFQIRDDIISTFDE-- 238 Query: 220 EMGKNIGEDFRNGKPT 235 + GK+ D GK T Sbjct: 239 KSGKSNLSDILEGKVT 254 >gi|325190513|emb|CCA25012.1| farnesyl pyrophosphate synthetase putative [Albugo laibachii Nc14] Length = 345 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 122/269 (45%), Gaps = 28/269 (10%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATA-------LMLEYRGDNHVLLACAIEFIHTATL 79 +E I +V++Y GGK R +L + A L E + ++L C IE + L Sbjct: 35 IEWIREVMEYNCL-GGKLNRGLLVVECAKSLFGEELSPEIKRKANILGWC-IELVQAFFL 92 Query: 80 LHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL---EALSLV 136 + DD++D+S +RRG++ + + + + FL+ ++ + + + + L Sbjct: 93 IADDIMDNSLMRRGQICWYKLPKVELTAVNDAFLMESFVFRILRLHFRNEITYTDIIHLF 152 Query: 137 ACTLAEGELRQL------SLSKNLDV---TEEDYLHVIKSKTAVL-FSAALEVSSLIAGV 186 T+ E+ QL L+ D+ T E Y +++ KTA F L + L+ G+ Sbjct: 153 QDTIHRTEMGQLLDLTSQPLNAPSDLSRFTVERYRKIVRYKTAYYTFYLPLACAMLLRGI 212 Query: 187 -QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 Q + M +G FQ+ DD LD G+ N +GK +G D ++ K + ++ A Sbjct: 213 LDEPSHQVAQDICMEIGEYFQIQDDFLDCFGDENVLGK-VGTDIQDNKCSWLILQALDHA 271 Query: 246 T--KRE--KNFWKSTINDGKISVENLKKA 270 +RE K + S+ D V+ L K+ Sbjct: 272 NDEQRELLKEHYGSSEEDSVAKVKELYKS 300 >gi|1229166|gb|AAB67731.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 222 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 14/183 (7%) Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALE- 131 T++L+HDD+ +D++ LRRGK V+G +VL GD LL+ AF M + + A E Sbjct: 1 TSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPER 60 Query: 132 --------ALSLVACTLAEGELRQLSLSK-NLDVTEEDYLHVIK-SKTAVLFSAALEVSS 181 A ++ L G++ L+ + N D ++L I KTA L AA + Sbjct: 61 MIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGV 120 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ G + L+ Y +G+ FQ+VDD+LD E+GK G+D GK T P ++ Sbjct: 121 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIG 180 Query: 242 FQR 244 +R Sbjct: 181 LER 183 >gi|322794010|gb|EFZ17248.1| hypothetical protein SINV_11878 [Solenopsis invicta] Length = 354 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 40/254 (15%) Query: 30 IPDVVKYL------IFSGGKRLRPMLTLATALML----EYRGDNHVL---LACAIEFIHT 76 IPDV K++ GK++R + + L + DN L LA +E + Sbjct: 38 IPDVAKWMEKVLEYNVPNGKKIRGLTLICVYKSLVPNDQLTEDNIRLAQILAWCVEMMQA 97 Query: 77 ATLLHDDVVDDSALRRGKVAAR--------------LVWGNQTSVLVGDFLLSQAFCMVI 122 L+ DD+ D S RRG+ L+ +L F +++C ++ Sbjct: 98 YLLVLDDIQDQSLFRRGQPCWHRYNNIGEAAVNDGVLLESAMYYILRKHFQGKESYCNLV 157 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSK--NLDVTEEDYLH-VIKSKTA-VLFSAALE 178 ET Q+A+ + C +L + K NL++ D L+ VIK KTA + + Sbjct: 158 ET-FQDAIFKTLMGQCL----DLNSTNFDKKPNLNLFTMDRLNSVIKFKTAHYTYVLPII 212 Query: 179 VSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + +AG+++S QA ++ + +G FQ+ DD LD G+ N GKN D ++GK T Sbjct: 213 AAMHLAGIKDSEMFNQA-QAILLEIGRLFQVQDDYLDCFGDSNVSGKN-STDIQDGKCTW 270 Query: 237 PVILAFQRGTKREK 250 +++A QR T ++ Sbjct: 271 LIVVALQRATPEQR 284 >gi|226468292|emb|CAX69823.1| trans-hexaprenyltranstransferase [Schistosoma japonicum] Length = 176 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%) Query: 148 LSLSKNLDVTE---EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA--LKSYGMNLG 202 + LS N D + + YL KTA L + + + +++ S R + +G +LG Sbjct: 2 MQLSTNSDDDDKRFQAYLTKTYRKTASLIANSCKAVAMLTLPTLSQRHIDDMYDFGKHLG 61 Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AF L+DDVLD+ + ++GK G D + G T PV+ A QR + + DG Sbjct: 62 MAFSLIDDVLDFVTDEAKLGKPSGADLQMGIATGPVLFAAQRYPELNTILLRQFSLDG-- 119 Query: 263 SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 + ++A +++++ + T A + Q A+ L DS +K+L+ V LQR Sbjct: 120 ---DTERALELVQQSDGVGQTRMLAEFHFQAAQRCLFQFRDSLSRKALLHVAANFLQR 174 >gi|297626728|ref|YP_003688491.1| Farnesyltranstransferase / Geranylgeranyl pyrophosphate synthase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922493|emb|CBL57066.1| Farnesyltranstransferase / Geranylgeranyl pyrophosphate synthase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 358 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 70/270 (25%), Positives = 104/270 (38%), Gaps = 36/270 (13%) Query: 40 SGGKRLRPMLTL-ATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSALRRGKVA 96 +GGKRLRP D LL E +H A L+HDD++DDS RRG A Sbjct: 54 AGGKRLRPAFCFWGHVAAGGAPADPTALLDATAGFELLHVAALVHDDLIDDSDTRRGMPA 113 Query: 97 AR----------------LVWGNQTSVLVGDFLL---SQAFCM--VIETKSQEALEALSL 135 A +G ++L+GD L +Q F + A L Sbjct: 114 AHRQLEELHHRGGGVGDPAAFGRAGAILLGDLLTAWSTQRFATAGLDPAAFARARWVLDA 173 Query: 136 VACTLAEGEL-----RQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNS 189 V + G+ T E V++ KTA L+ + +AG Sbjct: 174 VRTDVNVGQFLDLAAEGGLAGGAGLATAE---QVVEYKTARYTVIRPLQFGAALAGAPAQ 230 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L G +G AFQ DD+L G+ GK G+D R K T+ V+ A R Sbjct: 231 LLDGLAHVGSAVGRAFQFRDDLLGVFGDEELTGKPAGDDLRENKRTVLVVDALHD-QPRL 289 Query: 250 KNFWKSTINDGKISV--ENLKKAFIIMREN 277 ++ ++D ++ E L+ + + R N Sbjct: 290 ADYLGRPLSDPELDAAREMLRSSGAVSRLN 319 >gi|62959215|gb|AAY23715.1| farnesyl diphosphate synthase [Synechococcus sp. WH 6501] Length = 145 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 14/145 (9%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-- 136 HDD+ +D+ LRRG+ A + + T++L GD L + AF + E + L++V Sbjct: 1 HDDMPGMDNDDLRRGRPTAHIAFDEATAILAGDALQTLAFGWLAEAPGLDDQVRLAMVRE 60 Query: 137 ------ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +A G+ L S+ K L V + + +H + KT L +A++ + +L A N Sbjct: 61 LATASGHQGMAGGQAIDLESVGKQLTVEQLENMH--RHKTGALIAASVRMGALTATEVNE 118 Query: 190 VR-QALKSYGMNLGIAFQLVDDVLD 213 + AL Y LG+AFQ+ DD+LD Sbjct: 119 DQLAALTVYSQTLGLAFQVQDDILD 143 >gi|328767086|gb|EGF77137.1| hypothetical protein BATDEDRAFT_14267 [Batrachochytrium dendrobatidis JAM81] Length = 290 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 19/223 (8%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +YLI G+ +R +L + + ++ + +HTA+LL DDV D S LRRG Sbjct: 7 QYLIQHPGQEIRNLLIEGFQKWFQVPTEKLAIIKQVVAMLHTASLLVDDVEDGSDLRRGV 66 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 ++G +++ ++ A V+ K ++A + EL+ L L + + Sbjct: 67 PVTHKIFGVASTINAANYAYFIALENVLMLKDVRIVQAFT--------EELQLLHLGQGM 118 Query: 155 DV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 ++ +E DYL ++++KT L + + L ++ + +K + +G+ + Sbjct: 119 EIHWRDTVVCPSESDYLKMVENKTGGLLRLGVRMMQLDIESPAAL-EYIKLVNL-IGVFY 176 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 Q+ DD L+ + K ED GK + P++ + + + Sbjct: 177 QVRDDYLNLKSAKYHDRKGYAEDLTEGKFSYPIVRCIHKDSSK 219 >gi|328869898|gb|EGG18273.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium fasciculatum] Length = 300 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 11/211 (5%) Query: 35 KYLIFSGGKRLRPML--TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRR 92 KY+ + GK +R +L + L +E R V + ++ +H ++LL DD+ D+S LRR Sbjct: 21 KYITETPGKGVRALLIESFNHWLKVEDRVVKEV--SSLVQSLHMSSLLIDDIEDNSLLRR 78 Query: 93 GKVAARLVWGNQTSVLVGDF--LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 G A ++G ++ +F LS CM + + LV +G Sbjct: 79 GTPTAHTLYGVPQTINCANFVYFLSIEQCMRLGNHQATQVYIEELVRSHRGQG-WDIYWR 137 Query: 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 + TE++Y ++K KT LF L V + + + NL + +Q+ DD Sbjct: 138 DNQICPTEDEYKSMVKDKTGGLFRMGLRVLQCFSENKTDYTLLID----NLALYYQIRDD 193 Query: 211 VLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L+ K ED GK + PVI A Sbjct: 194 YLNLVSGDYHNFKTFCEDITEGKYSYPVIRA 224 >gi|62959217|gb|AAY23716.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP839] Length = 145 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 14/145 (9%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-- 136 HDD+ +D+ LRRG+ A + + T++L GD L + AF + E + L++V Sbjct: 1 HDDLPGMDNDDLRRGRPTAHIAFDEATAILAGDALQTLAFGWLAEAPGLDDQVRLAMVRE 60 Query: 137 ------ACTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +A G+ L S+ K L V + + +H + KT L +A++ + +L A N Sbjct: 61 LATASGHQGMAGGQAIDLESVGKQLTVEQLENMH--RHKTGALIAASVRMGALTATEVNE 118 Query: 190 VR-QALKSYGMNLGIAFQLVDDVLD 213 + AL Y LG+AFQ+ DD+LD Sbjct: 119 DQLAALTVYSQTLGLAFQVHDDILD 143 >gi|328793673|ref|XP_396224.4| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera] Length = 418 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 37/254 (14%) Query: 28 EMIPDVVK-------YLIFSGGKRLRPMLTLATALML---EYRGDNHVL---LACAIEFI 74 E +PDV K Y + GGKR + +A L+ + +N L LA +IE + Sbjct: 98 EELPDVKKWTKELLEYTVPKGGKRRSVPIVIAYKLLASQDQLTEENIRLARILAWSIEIM 157 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQ----E 128 + DD++D++ +RR + + G + +L +I+ KS+ + Sbjct: 158 QAFHTMIDDILDNANMRRNQPTWHVKVG--LGAINDGLILETCIYKLIKKHFKSKNCYTD 215 Query: 129 ALEALSLVACTLAEGELRQLSLS------KNLDVTEED-YLHVIKSKTAVL-----FSAA 176 ++ L A GE + +S +N ++ D Y H+IK KT+ FS A Sbjct: 216 IVDILLKYNTKAAHGECLDILISTDWAKNENFNLFSMDRYNHLIKYKTSYFSFILPFSLA 275 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + + +I + R+A K + +G FQ+ +D LDY + E+G+ G D + GK T Sbjct: 276 MRFAGIIDPEMH--REAEKIL-IKIGHLFQVQNDFLDYYSK-EEIGEKSGTDIQEGKCTW 331 Query: 237 PVILAFQRGTKREK 250 P+++A +R T +K Sbjct: 332 PIMIALERATAEQK 345 >gi|242827321|ref|XP_002488809.1| geranylgeranyl diphosphate synthase, putative [Talaromyces stipitatus ATCC 10500] gi|218712065|gb|EED11493.1| geranylgeranyl diphosphate synthase, putative [Talaromyces stipitatus ATCC 10500] Length = 745 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 21/222 (9%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H +L+ DD+ D S LRRGK + ++G +V ++ + +A V + +E++ Sbjct: 496 LHNTSLMLDDMEDGSTLRRGKSSTHTIFGAGQTVNAANYQIIRALEEVQKLGDKESVMIF 555 Query: 134 SLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIA 184 + EL+ L + ++LD+ T ++Y +++ KT LF + SL + Sbjct: 556 T--------EELKNLYIGQSLDLHWTNNVICPTVDEYFRMVEHKTGGLFRLFGRLLSLHS 607 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 N V+ L S N G +Q DD + K ED GK +LPVI Sbjct: 608 --TNPVKADLTSLLDNFGRYYQTRDDYSNLTSPEYTTQKGFCEDLDEGKFSLPVIHMMLS 665 Query: 245 GTKRE--KNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284 +N W + + + S+ + + +M++ +L TE Sbjct: 666 APSNTVIRNIWTRRLVNTQASLSHKQAILELMKKGGSLQFTE 707 >gi|282862498|ref|ZP_06271560.1| Polyprenyl synthetase [Streptomyces sp. ACTE] gi|282562837|gb|EFB68377.1| Polyprenyl synthetase [Streptomyces sp. ACTE] Length = 383 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 102/252 (40%), Gaps = 38/252 (15%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--NHVLLACAIEFIHTATLLHDDV 84 E + V + GGKRLR L GD V + A+E + L+HDDV Sbjct: 54 AEEVAGRVAAFVLRGGKRLRTAFVWCGWLAAGRGGDPGTPVRIGAALELLQACALVHDDV 113 Query: 85 VDDSALRRGKVAARLVWGNQ----------------TSVLVGDFLLSQAFCMVIETKSQE 128 +D S +RRG A + +VL GD L+ A ++ ET Sbjct: 114 MDGSPVRRGAPAVHADFARAHREAGLRGSAASYSATAAVLAGDLALAWADDLLTET---- 169 Query: 129 ALEALSLVACTLAEGELR----QLSLSKNLDV-------TEEDYLHVIKSKTAVLFSA-- 175 AL+ E R ++ + LD+ ++ D I + + L++ Sbjct: 170 ---ALAAPHGDRLHREWRAMRSEMVAGQYLDLRAQATGSSDGDEARTIATLKSALYTVER 226 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L + ++ A AL+S G G+AFQL DD+L G+ GK GED K T Sbjct: 227 PLALGAVSAAADARATAALRSAGRCAGLAFQLRDDLLGAFGDPALTGKPAGEDLSGRKLT 286 Query: 236 LPVILAFQRGTK 247 + +A +R T+ Sbjct: 287 YLLAVAVRRATE 298 >gi|325001247|ref|ZP_08122359.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1] Length = 383 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 23/197 (11%) Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARL---VW-------------GNQTSVLVGDF 112 +E +H LL DDV+D S LRRG+ + W G +VL+GD Sbjct: 102 AGLELLHAFALLQDDVMDGSLLRRGRPTVHVQLAAWHRGQGMSGCPDRFGESGAVLLGDL 161 Query: 113 LLSQAFCMVIETK-SQEALE----ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 L A + E+ ++AL+ + LA G+ L T ++ + V++ Sbjct: 162 CLVWAEQAMRESGLPRDALDRGWPRYDAMRSELAVGQFADLLNEARRVPTLDEVMDVLRR 221 Query: 168 KTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 K+ LE+ + +AG + + L YG +G AFQ+ DDVL G + GK G Sbjct: 222 KSGNYTVRRPLELGAAMAGGGDDLVALLGDYGTMVGEAFQMRDDVLGVFG-TDATGKPTG 280 Query: 227 EDFRNGKPTLPVILAFQ 243 +D K T V+LA + Sbjct: 281 DDLAERKATSVVVLARE 297 >gi|301103047|ref|XP_002900610.1| geranylgeranyl pyrophosphate synthetase [Phytophthora infestans T30-4] gi|262101873|gb|EEY59925.1| geranylgeranyl pyrophosphate synthetase [Phytophthora infestans T30-4] Length = 296 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 23/187 (12%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL--LSQAFCMVIETKSQE 128 ++ +H A+LL DD+ DDS +RRG+ A ++G ++ +++ LS C + + Sbjct: 53 VDQLHNASLLIDDIEDDSEMRRGQPVAHHIFGVPATINCANYVYFLSLQKCQAL--GNPR 110 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 AL+ + L +G+ + +L T ++YL ++++KT LF A+ Sbjct: 111 ALQVYTDEMLRLHQGQGLDIFWRDHLQCPTVDEYLEMVQNKTGGLFRLAV---------- 160 Query: 188 NSVRQALKSYGMN-------LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + QA M+ L + FQ+ DD ++ E K+ ED GK + P+I+ Sbjct: 161 -GLMQAFSDSTMDFTPLVNALAVYFQIRDDYVNLLDEAYMENKSFCEDLTEGKFSFPLIV 219 Query: 241 AFQRGTK 247 A + + Sbjct: 220 AIRENPQ 226 >gi|256752080|ref|ZP_05492948.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256749090|gb|EEU62126.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 124 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%) Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 ++H + KTA L A++ + IAG AL+ Y +G AFQ+ DD+LD GE + Sbjct: 5 FIH--EHKTAALIEASVCAGAYIAGATEEDIHALREYARLIGFAFQIKDDILDVIGEEEK 62 Query: 221 MGKNIGEDFRNGKPTLPVILAFQR 244 +GK +G D GK T I ++ Sbjct: 63 LGKKVGSDKEKGKFTFVNIFELEK 86 >gi|59709779|gb|AAW88517.1| geranylgeranyl diphosphate synthase [Epichloe festucae] gi|170674503|gb|ACB30137.1| geranylgeranyl diphosphate synthase [Epichloe festucae] Length = 465 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 10/233 (4%) Query: 11 DMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 + E +N+ + D E ++ Y+ GK R L + L+ D ++ Sbjct: 158 EHEDLNYTPQRSWTDDKEKVVRAPFDYVAGHPGKDFRSQLISSFNAFLQVPPDRLEIITR 217 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+ +H ++LL DDV D S LRRG A ++G ++ +++ A V + + Sbjct: 218 AVGMLHESSLLVDDVQDSSELRRGFPVAHNIFGVPQTINSANYIYFVALQEVQKLGNPPL 277 Query: 130 LEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + L G+ L L TE+DYL ++ +KT LF +++ +Q Sbjct: 278 IGIFADELVNLHRGQGMDLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIKL------MQA 331 Query: 189 SVRQALKSYGM-NL-GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 A+ + NL G+ FQ+ DD L+ K + ED GK + P+I Sbjct: 332 ESAAAVDCVPLVNLIGLIFQIRDDYLNLSSREYSDNKGLCEDLTEGKFSFPII 384 >gi|134058744|emb|CAK38728.1| unnamed protein product [Aspergillus niger] Length = 401 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 25/183 (13%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 I +H ++LL DD+ D+S LRRG+ A V+G ++ L+QAF V+ Sbjct: 145 IGHLHDSSLLLDDIQDNSELRRGRPTAYRVFGVAQTINAATHALTQAFEKVV-------- 196 Query: 131 EALSLVACTLAEG---ELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALE 178 L+ + G ELR L + + +D+ + DYL + + KT LF A Sbjct: 197 ---PLMKPGTSHGFFDELRNLHVGQAMDLHWTRSGYRPSIADYLEMNRLKTGALFCLASN 253 Query: 179 VSSLIAGVQ-NSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + + +++Q L ++LG FQ DD ++ + K +D GK +L Sbjct: 254 LLYIQGSFSAEAIKQTDLSDLMISLGQYFQARDDYINLASTKYQEQKGFAQDLDEGKLSL 313 Query: 237 PVI 239 P+I Sbjct: 314 PLI 316 >gi|59709773|gb|AAW88513.1| geranylgeranyl diphosphate synthase [Neotyphodium lolii] Length = 466 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 9/207 (4%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK R L + L+ D ++ A+ +H ++LL DDV D S LRRG Sbjct: 185 YVAGHPGKDFRSQLISSFNAFLQVPPDRLEIITRAVGMLHESSLLVDDVQDSSELRRGFP 244 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ A V + + + + L G+ L L Sbjct: 245 VAHNIFGVPQTINSANYIYFVALQEVQKLGNPPLIGIFADELVNLHRGQGMDLFWRDTLT 304 Query: 156 -VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM-NL-GIAFQLVDDVL 212 TE+DYL ++ +KT LF +++ +Q A+ + NL G+ FQ+ DD L Sbjct: 305 CPTEDDYLEMVGNKTGGLFRLGIKL------MQAESAAAVDCVPLVNLIGLIFQIRDDYL 358 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + K + ED GK + P+I Sbjct: 359 NLSSREYSDNKGLCEDLTEGKFSFPII 385 >gi|224080676|ref|XP_002306207.1| predicted protein [Populus trichocarpa] gi|222849171|gb|EEE86718.1| predicted protein [Populus trichocarpa] Length = 258 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 9/97 (9%) Query: 32 DVVKYLIFS-GGKRLRPMLTLATALMLEYRGDNHVL---LACAIEFIHTATLLHDDV--V 85 + ++Y + + G KR P++ +A E G N + ACA+E +H A+L+HDD+ + Sbjct: 83 EAMRYSVLAKGAKRAPPVMCVAAC---ELFGGNRLAAFPTACALEMVHAASLIHDDLPCM 139 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 DD RRG+ + ++G ++L GD L F ++ Sbjct: 140 DDDPSRRGQPSNHTIYGVDMAILAGDALFPLGFSHIV 176 >gi|298710752|emb|CBJ32173.1| geranylgeranyl pyrophosphate synthase, chloroplast precursor [Ectocarpus siliculosus] Length = 254 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 2/87 (2%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVVDDSALR 91 + Y + +GGKR+RP+LT+A M + + A + E IHT +L+H +DD LR Sbjct: 145 IHYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDDLR 204 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF 118 RG + +G ++L GD LLS++F Sbjct: 205 RGMPTCHVKYGEDIAILAGDALLSKSF 231 >gi|282935089|gb|ACT79809.3| mitochondrial farnesyl diphosphate synthase [Aphis gossypii] Length = 394 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 38/253 (15%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHT 76 IPDV K+L GGK+ R + + + ML D +L +E + Sbjct: 78 IPDVTKWLAKVLQYNVPGGKKNRGLALVLSFKMLSSPSDQTDENLRLSYILGWCVEILQA 137 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEA--- 129 L+ DD++D++ RRG R W + V D LL Q +I+ ++ Sbjct: 138 YQLVLDDIMDNAITRRG----RPCWYRHNDIGLMAVNDGILLEQTIYQLIKKYFKDKPYY 193 Query: 130 ---LEALSLVACTLAEGELRQLSLSKNLDV------TEEDYLHVIKSKTAVL-FSAALEV 179 LE V + G+ + + + T E+Y ++K KTA F + + Sbjct: 194 VHILELFYDVTMKTSMGQCLDMLTANSFKTKKLEKYTMENYTAIVKYKTAYYSFFLPVCL 253 Query: 180 SSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + + + RQA K+ + +G FQ+ DD LD G+ MGK IG D +GK + Sbjct: 254 AMRMTNINDPEIFRQA-KTILLEMGHFFQVQDDFLDCYGDPEVMGK-IGTDIEDGKCSWL 311 Query: 238 VILAFQRGTKREK 250 ++A Q+ +K Sbjct: 312 AVVALQKVNSEQK 324 >gi|70985354|ref|XP_748183.1| geranylgeranyl pyrophosphate synthase [Aspergillus fumigatus Af293] gi|66845811|gb|EAL86145.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus fumigatus Af293] Length = 452 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 19/218 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL--LACAIEFIHTATLLHDDVVDDSA 89 D V Y+ K +R L AL L ++ +H++ + ++ +H +TL+ DD+ D S Sbjct: 210 DPVHYIQSLPSKNMR--TKLVDALNLWFQLPHHLVDTVKGTVDDLHNSTLILDDIQDSSY 267 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG A V+G+ + +LL QA + Q V +G L++L+ Sbjct: 268 LRRGFAATHHVFGSAQCINSATYLLVQAASRLSVHNEQ-----YPAVITVFLDG-LKELA 321 Query: 150 LSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 L ++ D+ + E+Y+ ++ KT V+F + + + Q L Sbjct: 322 LGQSWDLNWRSTGYCPSTEEYMAMVDGKTGVMFDMIVRMMHCFSSSQTVPVSELSQLTQL 381 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 LG +Q+ DD + + K ED GK + P+ Sbjct: 382 LGRWYQVRDDYQNLQDAQYTAQKGFCEDLDEGKLSYPL 419 >gi|225163555|ref|ZP_03725865.1| polyprenyl synthetase [Opitutaceae bacterium TAV2] gi|224801821|gb|EEG20107.1| polyprenyl synthetase [Opitutaceae bacterium TAV2] Length = 136 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 2/76 (2%) Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 DY+H+ +KTA + A+L + L+ G L G LG+AFQ++DD+LD + Sbjct: 16 DYIHL--NKTAAMIRASLVMGGLVGGADEPALATLARAGRQLGLAFQIIDDILDTTADQA 73 Query: 220 EMGKNIGEDFRNGKPT 235 +GK G+D GK T Sbjct: 74 TLGKTPGKDAAAGKVT 89 >gi|42523219|ref|NP_968599.1| putative octaprenyl-diphosphate synthase [Bdellovibrio bacteriovorus HD100] gi|39575424|emb|CAE79592.1| putative octaprenyl-diphosphate synthase [Bdellovibrio bacteriovorus HD100] Length = 329 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 17/180 (9%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 L+ +E+IH +L+ DD+ DDS RRG A ++G ++ +G+++ +A + Sbjct: 69 LSRVLEWIHAGSLIVDDIQDDSLERRGGPTAHRLYGVGPALNLGNWMYFEALKGLHALPV 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTE----------EDYLHVIKS-KTAVLFSA 175 ++++ L +++C A + Q L + LD+ ++ +H S K+ L + Sbjct: 129 DDSVK-LKIISC--AHEAMHQAHLGQALDLGANMKTLSAEQIQEVVHKSHSLKSGALVAL 185 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A++V +LI Q + Q L+ GM LG + Q DD+ + + N ED + G+P+ Sbjct: 186 AMQVGALIGDAQADL-QLLQELGMQLGSSLQRFDDLGNLK--FNCTDSKALEDLKLGRPS 242 >gi|134300043|ref|YP_001113539.1| hypothetical protein Dred_2199 [Desulfotomaculum reducens MI-1] gi|134052743|gb|ABO50714.1| conserved hypothetical protein [Desulfotomaculum reducens MI-1] Length = 256 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 3/163 (1%) Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 +RP + L A + R + L ++FI A+ +H + D+A+ V R G Q Sbjct: 46 IRPAMVLIVARLYNCRSPRVLSLGAIVQFIFMASCIHKKI-PDAAVPNHTVDPR--DGTQ 102 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164 VLVGD+L + F + + L L+ + + EG + +++ + L + + Sbjct: 103 FPVLVGDYLYGKFFTNLCNSGLLCYLRPLAEIIGAIHEGGILKINKAAQLKDDNQLMNEI 162 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQL 207 I+ + A L + A ++ +AG +Q L +G+NLG+ + L Sbjct: 163 IRLEVAELMAGAASLAGDVAGAPQKDQQLLHEFGLNLGMLYGL 205 >gi|56756549|gb|AAW26447.1| SJCHGC00702 protein [Schistosoma japonicum] Length = 325 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 3/182 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 MEK N ++ V M P Y + GK +R +L A L+ +++ I Sbjct: 1 MEKRNMDGFGKLSEKVVMEP--YNYTCSTNGKGIRSLLMAAFNYWLKVPESTLDVISSVI 58 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 + +H A+L+ DD+ D S LRRGK AA V+G +S+ +++ A + + E+++ Sbjct: 59 QMLHNASLIIDDIEDGSYLRRGKPAAHCVFGTASSINSANYVYFLALEKLSVLRRPESVK 118 Query: 132 ALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L G+ + + +E +Y ++ KT LF + + L + Q + Sbjct: 119 IFTEQMLELHRGQGMDIYWRSSFKCPSESEYEAMVLCKTGGLFGLGVRLMQLFSKNQTII 178 Query: 191 RQ 192 R+ Sbjct: 179 RK 180 >gi|281338720|gb|EFB14304.1| hypothetical protein PANDA_018257 [Ailuropoda melanoleuca] Length = 420 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 33/244 (13%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQAFCM--VIETK 125 +E + L+ DD++D S RRG+ L W + + + D LL +A C+ +++ Sbjct: 159 VELLQAFFLVSDDIMDSSLTRRGQ----LCWYQKPGIGLDAINDALLLEA-CIYRLLKLY 213 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL 172 +E L+L+ L Q + + LD+ TE+ Y ++K KTA Sbjct: 214 CREQPYYLNLIELFLQSS--YQTEIGQTLDLITAPQGSVDVGRFTEKRYKSIVKYKTA-F 270 Query: 173 FSAALEVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 +S L V++ +AG+ A K + +G FQ+ DD LD G+ + GK IG D Sbjct: 271 YSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDI 329 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAY 288 ++ K + V+ QR + ++ + N G+ E + + + E N V T+Y Sbjct: 330 QDNKCSWLVVQCLQRASPEQRQLLQE--NYGQKEAEKVARVKALYEELNLPAVFTQYEED 387 Query: 289 SYGQ 292 SY Sbjct: 388 SYSH 391 >gi|333022534|ref|ZP_08450598.1| putative geranylgeranyl pyrophosphase synthase [Streptomyces sp. Tu6071] gi|332742386|gb|EGJ72827.1| putative geranylgeranyl pyrophosphase synthase [Streptomyces sp. Tu6071] Length = 467 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 108/254 (42%), Gaps = 59/254 (23%) Query: 33 VVKYLIFS---GGKRLR---------------PMLTLATALMLEYRGDNHVLLACAIEFI 74 V ++L + GG+RLR P T+A AL + A+E + Sbjct: 61 VAQWLAATTRGGGRRLRSAFVWWGLRVACPAPPPGTVAAALTV----------GAAVELL 110 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGN---------------QTSVLVGDFLLSQAFC 119 + L+ DDV+D+S +RRG+ A ++ G+ +VL GD + A Sbjct: 111 QSCALVQDDVMDNSPVRRGQPALHVLLGSTRAAAAGPGALGFGQSAAVLAGDLAMVWAED 170 Query: 120 MVIETKSQEALEA-----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 + + A S++ + G+ L L+ D + H ++ TAVL S Sbjct: 171 TFADAHPPPEVAAPVRRLWSVLRTEMIAGQY--LDLAGQADASH-SATHALR--TAVLKS 225 Query: 175 AALEVS------SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 V+ +L+A V + L++ G G+AFQL DD+L G+ GK GED Sbjct: 226 GRYSVARPLELGALLAAAPPEVCRVLRAAGGAAGLAFQLRDDLLAVWGDPARTGKPTGED 285 Query: 229 FRNGKPTLPVILAF 242 R GKPTL L F Sbjct: 286 IREGKPTLLAALGF 299 >gi|196013707|ref|XP_002116714.1| hypothetical protein TRIADDRAFT_31406 [Trichoplax adhaerens] gi|190580692|gb|EDV20773.1| hypothetical protein TRIADDRAFT_31406 [Trichoplax adhaerens] Length = 352 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 127/279 (45%), Gaps = 39/279 (13%) Query: 40 SGGKRLRPMLTLATALML---EYRGDNHV----LLACAIEFIHTATLLHDDVVDDSALRR 92 GGKR R + +ATA +L + D + +L +EF+ L+ DD++DDS RR Sbjct: 54 PGGKRNRGLSVIATARLLVAPQELSDEDIKGALILGWCVEFLQAFFLVADDIMDDSVTRR 113 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----------KSQEAL-EALSLVACTLA 141 G+ W + G ++ +F +IE+ +SQ + L L+ T Sbjct: 114 GQPC----WFRNPEI--GTIAINDSF--MIESCIYKLLKKYFRSQPYYADLLDLMHETTY 165 Query: 142 EGELRQ----LSLSKNLDVTE---EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR--- 191 + E+ Q ++ +D + E Y ++K KTA+ +S L V+ + +N+ Sbjct: 166 DTEVGQTLDLITAPSYVDFSRFSIERYRAIVKYKTAI-YSFYLPVALAMTMTKNNSEVDY 224 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 Q + M +G FQ+ DD LD G+ GK IG D + K + V+ A ++ +K Sbjct: 225 QDARQVLMQMGEYFQIQDDFLDCFGDPKITGK-IGTDIEDNKCSWLVVQALSIASEEQKK 283 Query: 252 FWKSTI-NDGKISVENLKKAFIIMRENRALVDTEYRAYS 289 + + +++V+ +K + + + D E ++Y+ Sbjct: 284 VLQDNYAKNDQVAVQKVKDLYNELNLKQRYNDYEEQSYT 322 >gi|317036431|ref|XP_001397340.2| geranylgeranyl pyrophosphate synthase [Aspergillus niger CBS 513.88] Length = 696 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 4/214 (1%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H A+L+ DD+ D S LRRG+ A V+G ++ +F+L QA V + L+ Sbjct: 447 LHNASLMLDDIEDGSPLRRGQPATHTVFGQALTINSANFVLIQAMDQVRLLEDSRCLDIF 506 Query: 134 SLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L G+ L ++ + +EE+YL +I+ KT LF + A + + Sbjct: 507 VEETRNLFIGQSFDLYWTRQDECPSEEEYLEMIRQKTGGLFRLLARLMMQKATSKKNRCL 566 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA--FQRGTKREK 250 L+ +G FQ+ DD + E K ED GK + P+I A F T + Sbjct: 567 PLEPLVDLMGEYFQIRDDYKNLAEEYTGQ-KGFCEDLDEGKFSFPLIHAHKFLPETSDIR 625 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284 N K + + ++ + E+ ++ TE Sbjct: 626 NILKQGRRSAGLGIAQKQRVLGWLHESGSMTYTE 659 >gi|254821741|ref|ZP_05226742.1| IdsA2_2 [Mycobacterium intracellulare ATCC 13950] Length = 359 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 105/267 (39%), Gaps = 30/267 (11%) Query: 12 MEKVNFLILKRIC----SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +E F+ +R + +E + D++ + SGGK LR L + Sbjct: 23 VEVAEFVAQRRAADLDGAGIEAVGDILADFV-SGGKCLRSTFVYLGWLCGAPADPAALRA 81 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLV---W-------------GNQTSVLVGD 111 A + E +H LL DDV+D S +RRG+ +A W G ++L+GD Sbjct: 82 AASFELVHAFALLQDDVMDGSDVRRGRPSAHRQFGRWHRERGLPGASRRFGESAAILLGD 141 Query: 112 FLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166 L A M+ ++ + Q A + LA G+ L E L V + Sbjct: 142 LCLIWAEQMLRDSGIDPRRLQLAWPRYDAMRTELAVGQFADLINDARQAPGLEFVLDVAR 201 Query: 167 SKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 K+ LE+ + +AG L YG +G AFQL DDVL G GK Sbjct: 202 RKSGNYTVRRPLEIGAAMAGCGAHTLCQLGRYGRAVGEAFQLRDDVLGVFGSPAVTGKAS 261 Query: 226 GEDFRNGKPTLPVILAFQ---RGTKRE 249 D K T V+ A Q T+RE Sbjct: 262 AIDLLERKATSVVVAAHQLADPATRRE 288 >gi|84708902|gb|AAI11257.1| FDPS protein [Bos taurus] Length = 421 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 23/237 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG+ G + FLL + +++ +E Sbjct: 160 VELLQAFFLVSDDIMDSSLTRRGQTCWYQKPGIGLDAINDAFLLESSIYRLLKLYCREQP 219 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVLFSAAL 177 L L+ L Q + + LD+ TE+ Y ++K KTA +S L Sbjct: 220 YYLDLIELFLQSS--YQTEIGQTLDLITAPQGNVDLGRYTEKRYKSIVKYKTA-FYSFYL 276 Query: 178 EVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 V++ +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K Sbjct: 277 PVAAAMYMAGIDGEKEHAHAKKILLEMGEFFQIQDDYLDLFGDPSMTGK-IGTDIQDNKC 335 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSY 290 + V+ QR + ++ + N G+ E + + + E N + V +Y SY Sbjct: 336 SWLVVQCLQRASPEQRQILQE--NYGQKEAEKVARVKALYEEMNLSAVYMQYEEDSY 390 >gi|62288317|gb|AAX78434.1| farnesyl diphosphate synthase [Anthonomus grandis] Length = 438 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 55/283 (19%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLE----YRGDNHVL---LACAIEFIHT 76 +PDV++ + GK+ R ++ ++ MLE +N L L +E IH+ Sbjct: 122 LPDVMRRVARVLQYNVPNGKKNRGLILISAYKMLEDPKNLTPENIKLASVLGWCLEMIHS 181 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLL---------------SQAF 118 L+ DD++D+S RRG L W Q + + D L+ A+ Sbjct: 182 CFLVLDDIMDNSETRRGS----LCWYRQNGIGLSAINDGLILENAVYTLLKMHLRDHPAY 237 Query: 119 CMVI----ETKSQEALEALSLVACTLAEG--ELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 +I ET S+ L C ++G +L S+S+ Y ++K KTA Sbjct: 238 VPIIELFHETVSKTTLGQCLDSMCLDSDGKPKLEMFSMSR--------YTSIVKYKTAYY 289 Query: 173 -FSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 F + V+ +AG+ + RQA K+ + +G FQ+ DD LD G+ GK G D Sbjct: 290 SFHMPVAVAMYLAGMNDPEQHRQA-KTILLEMGEFFQIQDDFLDCFGDPAVTGKK-GTDI 347 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTIN-DGKISVENLKKAF 271 + GK + ++A QR + ++ + D SV +KK + Sbjct: 348 QEGKCSWLAVVALQRASAAQRKIMEEHYGVDDPNSVAIIKKLY 390 >gi|325289826|ref|YP_004266007.1| hypothetical protein Sgly_1709 [Syntrophobotulus glycolicus DSM 8271] gi|324965227|gb|ADY56006.1| hypothetical protein Sgly_1709 [Syntrophobotulus glycolicus DSM 8271] Length = 244 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 10/170 (5%) Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 L P + A L+ + LA ++I A +H V D + + Q Sbjct: 44 LCPAVVFAVTRALQKEELKMLSLASLFQYIFLADKIHRLVTDGDLPEQAR---------Q 94 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164 +LVGD+L Q F + E L + + T+ EG + + SL K +T E+Y H+ Sbjct: 95 YPILVGDYLFGQTFLKLCEKDLHPYLREFTGLIETMNEGVIHRWSL-KEKQMTLEEYKHI 153 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 + + A + A +++ + G + SV+ L+S+G ++G+A+ ++ Y Sbjct: 154 LSKERASVTKLAAGITAELNGAEESVKDQLESFGYHIGMAWAFSEEGQGY 203 >gi|322699696|gb|EFY91456.1| geranylgeranyl diphosphate synthase [Metarhizium acridum CQMa 102] Length = 429 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 6/231 (2%) Query: 11 DMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 + E +NF + D E ++ +Y+ GK R L A +L ++ Sbjct: 121 EHEDLNFTPRRCWTDDKEKVVRAPFEYVASHPGKDFRSQLINAFNALLRVPPGRLEIITR 180 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+ +H ++LL DDV D S LRRG A ++G ++ +++ A + + + + Sbjct: 181 AVGMLHESSLLVDDVQDSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPSS 240 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + + L G+ L L TE+DYL ++ +KT LF ++ L+ Sbjct: 241 ISVFADELVNLHRGQGMDLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIK---LMQAESA 297 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S + + +G+ FQ+ DD ++ K + ED GK + PVI Sbjct: 298 SDLDCVPLVNL-IGLIFQIRDDYMNLSSREYSDNKGLCEDLTEGKFSFPVI 347 >gi|260940298|ref|XP_002614449.1| hypothetical protein CLUG_05935 [Clavispora lusitaniae ATCC 42720] gi|238852343|gb|EEQ41807.1| hypothetical protein CLUG_05935 [Clavispora lusitaniae ATCC 42720] Length = 358 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 70/285 (24%), Positives = 118/285 (41%), Gaps = 42/285 (14%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------- 122 I H A+LL DD+ D S LRRG A +G ++ G+ + A I Sbjct: 66 IAIFHNASLLIDDIEDSSELRRGHPCAHTKYGVPLTINSGNLMYFVALQRAITALPNLWL 125 Query: 123 ETKSQEAL------EALSLVACTLAE--------GELRQLSLSKNLDV------------ 156 E + Q+ + L++V ++ E E+ L + LD+ Sbjct: 126 ELQEQKGIGYGQSGTDLTVVNPSVIECKTNRILVDEMLNLHQGQGLDIYWRDSLHEIMEN 185 Query: 157 --TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 T E+YL ++ +KT LF ++++ +L + V + + LGI +Q+ DD L+ Sbjct: 186 LPTIEEYLSMVMNKTGGLFRLSVKLLALFSPSPLQVETLIPLANL-LGIIYQIRDDYLNL 244 Query: 215 RGEVNEMGKNI-GEDFRNGKPTLPVILAFQRGTKREKNFWK----STINDGKISVENLKK 269 E K + GED GK +LPV+ ++ + T D K +++ K Sbjct: 245 IDERYFGMKGVAGEDLIEGKLSLPVLHCLLHNEEKSALHYVLLDLKTSEDRKNDPDSIAK 304 Query: 270 AFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 A + ++E+ +L T Y KA L P+ L E+V Sbjct: 305 AILFIKESGSLKFTYDLLQEYVSKALQMLGSFPEPDDACKLREIV 349 >gi|162538563|gb|ABY19313.1| farnesyl diphosphate synthase 2 [Myzus persicae] gi|168831500|gb|ACA35007.1| putative mitochondrial isoprenyl diphosphate synthase precursor [Myzus persicae] gi|169139042|gb|ACA48700.1| farnesyl diphosphate synthase 2 [Myzus persicae] Length = 396 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 108/252 (42%), Gaps = 38/252 (15%) Query: 31 PDVVKYL------IFSGGKRLRPMLTLATALMLE---YRGDNHV----LLACAIEFIHTA 77 PDV K+L GGK R ++ +++ ML Y D ++ +L +E + Sbjct: 81 PDVTKWLENLLQYNVPGGKNNRGLILVSSFKMLSSPSYLTDENLRLSYILGWCVEILQAY 140 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEA---- 129 L+ DD++D++ RRG R W V V D LL QA +++ ++ Sbjct: 141 QLVMDDLMDNAITRRG----RPCWYRHNDVGLMAVNDGILLEQAIYQLLKKYFKDKPYYT 196 Query: 130 --LEALSLVACTLAEGELRQLSLSKNL------DVTEEDYLHVIKSKTA---VLFSAALE 178 LE V A G+ + +K+ T E+Y ++K KTA + L Sbjct: 197 HILELFYDVTMKSAMGQCLDMLTAKSFKSKKLEKYTMENYKAIVKYKTAYYSFVLPVCLA 256 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + Q RQA K +++G FQ+ DD LD G GK IG D +GK + Sbjct: 257 MRMTNVNDQEIFRQA-KVILLDMGQFFQIQDDYLDCYGNPEITGK-IGTDIEDGKCSWLA 314 Query: 239 ILAFQRGTKREK 250 + A Q+ T +K Sbjct: 315 VKALQKVTTEQK 326 >gi|146319409|ref|YP_001199121.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] gi|145690215|gb|ABP90721.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] Length = 168 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%) Query: 164 VIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 I+ KTA LF A ++ S + G + A +S G LG+AFQL DD++DY+ +V E G Sbjct: 14 TIQGKTAFLFGLACQLGSFVPGQSRKDSSMAFRS-GQALGMAFQLRDDLIDYQLDVAESG 72 Query: 223 KNIGEDFRNGKPTLPVILA 241 K +D +NG T P++ A Sbjct: 73 KPRLQDIQNGIYTAPLLFA 91 >gi|254444809|ref|ZP_05058285.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] gi|198259117|gb|EDY83425.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] Length = 305 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 22/242 (9%) Query: 30 IPDVVKYLIFSG--------GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 +PD ++ +F G R + + +L+ + +IE H A+L+ Sbjct: 22 LPDGLESTLFEAASHALEAEGSFSRANIAIGAGEILDMDTSRAEAIGASIELFHLASLIL 81 Query: 82 DDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSL 135 DD+ +DD+++RR K A V+G ++L +++A+ ++ E ++ LEA L Sbjct: 82 DDLPCMDDASMRRSKECAHSVYGEGAAILAALGFINRAYSLLWDLFSEVGKEQQLEAADL 141 Query: 136 VACTLA-----EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 V L +G+ R + + + E + KT L L + ++++ Sbjct: 142 VNDCLGFSGILDGQSRDIHFEDSAGLGAE-VRQIASQKTGSLIRLCLLLPAILSSASRYD 200 Query: 191 RQALKSYGMNLGIAFQLVDDVLD-YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + L GIA+Q+ DD+ D Y G+ GK D G+P + + + Q + Sbjct: 201 KMHLTRLAQYWGIAYQVADDLKDIYLGDAAS-GKTTRRDALLGRPNMALAIGEQAAARML 259 Query: 250 KN 251 K+ Sbjct: 260 KD 261 >gi|86751112|ref|YP_487608.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2] gi|86574140|gb|ABD08697.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2] Length = 287 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 6/206 (2%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV--DDSAL 90 ++ +F G R+RP L + A A+E +H A+L+HDD+ D + + Sbjct: 30 AMRSAVFPRGARVRPRLCHSVAAACGDDNPATEAAGAALELMHCASLVHDDLPCFDGADI 89 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGELRQLS 149 RRG+ + +G +VL GD L+ AF + + + L L+ V + L ++ Sbjct: 90 RRGRPSVHKAFGEPLAVLTGDALIVLAFQTIARVNCAPDRLLKLTQVIGSAVGVPLGIVA 149 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 +E + H +SKT LF AA + AG + + G +G A+Q+ D Sbjct: 150 GQAWECESEINLAHYHRSKTGALFVAATAAGAASAGADP---EPWRMVGEKIGEAYQVAD 206 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPT 235 D+ D + +E+GK +G+D + +P+ Sbjct: 207 DLRDAAADEDEIGKPVGQDVAHDRPS 232 >gi|112983458|ref|NP_001036889.1| farnesyl pyrophosphate syntase [Bombyx mori] gi|15991313|dbj|BAB69490.1| farnesyl pyrophosphate syntase [Bombyx mori] Length = 427 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 41/255 (16%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGD---NHVLLA----CAIEFIHT 76 +P+ K+L GK+ R + T+ MLE + + ++LLA +E HT Sbjct: 112 VPEASKWLAKLLQYNVPNGKKNRGLATILAYKMLEKKENLTPENILLANVMGWCVEMFHT 171 Query: 77 ATLLHDDVVDDSALRRGKVA--------------ARLVWGNQTSVLVGDFLLSQAFCMVI 122 LL +D+++ + +RRG A L+ + L F + V+ Sbjct: 172 HQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDAALIQSAMYTSLKRHFNTKPYYNYVL 231 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDV---TEEDYLHVIKSKTAVL-FSAALE 178 ET ++ L+ C++ + + + D+ T E Y + K KT+ F + Sbjct: 232 ETFNE------MLMKCSMGHYVQKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTFQMPVS 285 Query: 179 VSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++ L+ GV + + RQA K+ + +G FQ+ DD LD G+ + + G D ++GK T Sbjct: 286 LALLMTGVDDPETHRQA-KTILLKMGEFFQIQDDFLDCFGDPT-VTEKYGTDIQDGKCTW 343 Query: 237 PVILAFQRGTKREKN 251 ++A QR T +K Sbjct: 344 LAVVALQRATPAQKQ 358 >gi|212638393|ref|YP_002314913.1| competence regulatory protein comQ [Anoxybacillus flavithermus WK1] gi|212559873|gb|ACJ32928.1| Competence regulatory protein ComQ [Anoxybacillus flavithermus WK1] Length = 296 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 21/196 (10%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + +A A+E I A L DDVVD L + + +G LL Q + Sbjct: 62 IYIAAAVELIVLAGDLFDDVVDQDRLEDTAIPLHIA--------IGFLLLGQQAIANVPI 113 Query: 125 KSQEALEALSLV-ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S + L+ALS V +C L +Q ++ ++ TE +Y+ +++ K+ L + A + +L+ Sbjct: 114 SSNKKLKALSYVTSCLLQSVHGQQTDVTCDVQ-TEAEYIKMVEKKSGSLVAMACVIGALL 172 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG ++ A+++Y +GIA Q +D+ LD ++ D K +LP++ + Sbjct: 173 AGKEDIA--AIETYASYIGIAAQ-IDNDLDALYNWDKKA-----DIHAKKKSLPILYMLE 224 Query: 244 RGTKREKNFWKSTIND 259 + N WK N+ Sbjct: 225 S---KHDNLWKQYFNN 237 >gi|118618553|ref|YP_906885.1| polyprenyl synthetase IdsB [Mycobacterium ulcerans Agy99] gi|118570663|gb|ABL05414.1| polyprenyl synthetase IdsB [Mycobacterium ulcerans Agy99] Length = 328 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 4/145 (2%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--- 127 +E +H+ TLLHDDV+ R G+ A +WG ++L+GD L + A + + Sbjct: 94 VELVHSGTLLHDDVMAGEVTRGGRRAVWSIWGIDNAILLGDALQTAAIRTLTDLPDPGVA 153 Query: 128 -EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A+ L L G + + Y + KTA L + +L A Sbjct: 154 VRAVMRLETSCLDLCIGRFEDCAFECGQAGPVDSYERMAAGKTAALIGCCCGLGALAADA 213 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDV 211 ++ AL+ +G LG+AFQ V+D+ Sbjct: 214 GDATITALERFGRELGLAFQCVNDL 238 >gi|118616234|ref|YP_904566.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium ulcerans Agy99] gi|118568344|gb|ABL03095.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium ulcerans Agy99] Length = 330 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 24/192 (12%) Query: 75 HTATLLHDDVVDDSALRRGKVA----------------ARLVWGNQTSVLVGDFLLSQAF 118 H LL DDV+D S RRG A A +G +VL+GD L A Sbjct: 129 HAFALLQDDVMDQSPQRRGSPAVHVQLARCHQRRGLSGAAARFGESAAVLLGDICLVWAE 188 Query: 119 CMVIET-----KSQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTA-V 171 M+ E+ + ++ + LA G+L LS +NL T + L V + K+ Sbjct: 189 QMLRESGVEDRRLRQVWPRYDAMRIELAVGQLCDLSNDIRNLS-TLDAVLDVARRKSGNY 247 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 LE+ + +A + L YG +G AFQL DD+L G GK G+D R Sbjct: 248 TVRRPLEMGAAMADCDERTLEQLARYGDAVGEAFQLRDDMLGVFGTPAITGKPSGDDLRE 307 Query: 232 GKPTLPVILAFQ 243 K T V+ A++ Sbjct: 308 RKATSVVVAAYE 319 >gi|183982574|ref|YP_001850865.1| polyprenyl synthetase IdsB [Mycobacterium marinum M] gi|183175900|gb|ACC41010.1| polyprenyl synthetase IdsB [Mycobacterium marinum M] Length = 328 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 4/145 (2%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--- 127 +E +H+ TLLHDDV+ R G+ A +WG ++L+GD L + A + + Sbjct: 94 VELVHSGTLLHDDVMAGEVTRGGRRAVWSIWGIDNAILLGDALQTAAIRTLTDLPDPGVA 153 Query: 128 -EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A+ L L G + + Y + KTA L + +L A Sbjct: 154 VRAVMRLETSCLDLCIGRFEDCAFECGQAGPVDSYERMAAGKTAALIGCCCGLGALAADA 213 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDV 211 ++ AL+ +G LG+AFQ V+D+ Sbjct: 214 GDATIAALERFGRELGLAFQCVNDL 238 >gi|294628908|ref|ZP_06707468.1| farnesyltranstransferase [Streptomyces sp. e14] gi|292832241|gb|EFF90590.1| farnesyltranstransferase [Streptomyces sp. e14] Length = 291 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 28/181 (15%) Query: 41 GGKRLRPMLTL--ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR 98 GGKR+RP+LT+ A+ E GD V +A ++E H L+HDD++DDS RRG+ Sbjct: 71 GGKRIRPILTMLGWQAVTGEAAGDTVVQVAASLEMFHAFALIHDDIMDDSDTRRGRPTIH 130 Query: 99 LVWGNQTS------------VLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 + +S VL+GD F S S++ L LV E Sbjct: 131 RALADNSSGDRTRRFGLGAAVLLGDLAFTWSDQILHTAGLTSEQTAAVLPLVTEMRTEVM 190 Query: 145 LRQL-------SLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKS 196 L Q +L+ ++D T L V + KTA L + + +AG A Sbjct: 191 LGQYLDLQATGALTDDVDAT----LTVNRYKTAKYTIERPLHIGAALAGADPRAMAACTE 246 Query: 197 Y 197 Y Sbjct: 247 Y 247 >gi|254729448|gb|ACT79808.1| mitochondrial farnesyl diphosphate synthase [Aphis gossypii] Length = 394 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 106/247 (42%), Gaps = 38/247 (15%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFIHT 76 IPDV K+L GGK+ R + + + ML D +L +E + Sbjct: 78 IPDVTKWLAKVLQYNVPGGKKNRGLALVLSFKMLSSPSDQTDENLRLSYILGWCVEILQA 137 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEA--- 129 L+ DD++D++ RRG R W + V D LL Q +I+ ++ Sbjct: 138 YQLVLDDIMDNAITRRG----RPCWYRHNDIGLMAVNDGILLEQTIYQLIKKYFKDKPYY 193 Query: 130 ---LEALSLVACTLAEGELRQLSLSKNLDV------TEEDYLHVIKSKTAVL-FSAALEV 179 LE V + G+ + + + T E+Y ++K KTA F + + Sbjct: 194 VHILELFYDVTMKTSMGQCLDMLTANSFKTKKLEKYTMENYTAIVKYKTAYYSFFLPVCL 253 Query: 180 SSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + + + RQA K+ + +G FQ+ DD LD G+ MGK IG D +GK + Sbjct: 254 AMRMTNINDPEIFRQA-KTILLEMGHFFQVQDDFLDCYGDPEVMGK-IGTDIEDGKCSWL 311 Query: 238 VILAFQR 244 ++A Q+ Sbjct: 312 AVVALQK 318 >gi|59709781|gb|AAW88518.1| geranylgeranyl diphosphate synthase [Epichloe typhina] Length = 464 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 25/215 (11%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y+ GK R L + L+ D ++ A+ +H ++LL DDV D S LRRG Sbjct: 183 YVAGHPGKDFRSQLISSFNAFLQVPPDRLEIITRAVGMLHESSLLVDDVQDSSELRRGFP 242 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ F + E + +++ A EL L + +D Sbjct: 243 VAHNIFGVPQTINSANYIY---FVALQELQKLGNPPIIAIFA-----DELVNLHRGQGMD 294 Query: 156 V---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM-NL-GIA 204 + TE+DYL ++ +KT LF +++ +Q A+ + NL G+ Sbjct: 295 LFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIKL------MQAESAAAVDCVPLVNLIGLI 348 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 FQ+ DD ++ K + ED GK + P+I Sbjct: 349 FQIRDDYMNLSSREYSDNKGLCEDLTEGKFSFPII 383 >gi|183984773|ref|YP_001853064.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium marinum M] gi|183178099|gb|ACC43209.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium marinum M] Length = 384 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 24/192 (12%) Query: 75 HTATLLHDDVVDDSALRRGKVA----------------ARLVWGNQTSVLVGDFLLSQAF 118 H LL DDV+D S RRG A A +G +VL+GD L A Sbjct: 114 HAFALLQDDVMDQSPQRRGSPAVHVQLARCHQRRGLSGAAARFGESAAVLLGDICLVWAE 173 Query: 119 CMVIET-----KSQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTA-V 171 M+ E+ + ++ + LA G+L LS +NL T + L V + K+ Sbjct: 174 QMLRESGVEDRRLRQVWPRYDAMRIELAVGQLCDLSNDIRNL-PTLDAVLDVARRKSGNY 232 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 LE+ + +A + L YG +G AFQL DD+L G GK G+D R Sbjct: 233 TVRRPLEMGAAMADCDERTLEQLARYGDAVGEAFQLRDDMLGVFGTPAITGKPSGDDLRE 292 Query: 232 GKPTLPVILAFQ 243 K T V+ A++ Sbjct: 293 RKATSVVVAAYE 304 >gi|29135293|ref|NP_803463.1| farnesyl pyrophosphate synthase [Bos taurus] gi|75054285|sp|Q8WMY2|FPPS_BOVIN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|18087503|gb|AAL58886.1|AF461050_1 farnesyl diphosphate synthase [Bos taurus] gi|151557019|gb|AAI49573.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Bos taurus] gi|296489639|gb|DAA31752.1| farnesyl pyrophosphate synthetase [Bos taurus] Length = 353 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 23/237 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG+ G + FLL + +++ +E Sbjct: 92 VELLQAFFLVSDDIMDSSLTRRGQTCWYQKPGIGLDAINDAFLLESSIYRLLKLYCREQP 151 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVLFSAAL 177 L L+ L Q + + LD+ TE+ Y ++K KTA +S L Sbjct: 152 YYLDLIELFLQSS--YQTEIGQTLDLITAPQGNVDLGRFTEKRYKSIVKYKTA-FYSFYL 208 Query: 178 EVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 V++ +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K Sbjct: 209 PVAAAMYMAGIDGEKEHAHAKKILLEMGEFFQIQDDYLDLFGDPSMTGK-IGTDIQDNKC 267 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSY 290 + V+ QR + ++ + N G+ E + + + E N + V +Y SY Sbjct: 268 SWLVVQCLQRASPEQRQILQE--NYGQKEAEKVARVKALYEEMNLSAVYMQYEEDSY 322 >gi|111305075|gb|AAI20219.1| FDPS protein [Bos taurus] Length = 376 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 23/237 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG+ G + FLL + +++ +E Sbjct: 115 VELLQAFFLVSDDIMDSSLTRRGQTCWYQKPGIGLDAINDAFLLESSIYRLLKLYCREQP 174 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVLFSAAL 177 L L+ L Q + + LD+ TE+ Y ++K KTA +S L Sbjct: 175 YYLDLIELFLQSS--YQTEIGQTLDLITAPQGNVDLGRFTEKRYKSIVKYKTA-FYSFYL 231 Query: 178 EVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 V++ +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K Sbjct: 232 PVAAAMYMAGIDGEKEHAHAKKILLEMGEFFQIQDDYLDLFGDPSMTGK-IGTDIQDNKC 290 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSY 290 + V+ QR + ++ + N G+ E + + + E N + V +Y SY Sbjct: 291 SWLVVQCLQRASPEQRQILQE--NYGQKEAEKVARVKALYEEMNLSAVYMQYEEDSY 345 >gi|294952248|ref|XP_002787262.1| Heptaprenyl diphosphate synthase component II, putative [Perkinsus marinus ATCC 50983] gi|239902099|gb|EER19058.1| Heptaprenyl diphosphate synthase component II, putative [Perkinsus marinus ATCC 50983] Length = 229 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/50 (54%), Positives = 36/50 (72%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 LLA IE H A+LLHDDVVD++A RRG + ++GNQ +V GDF++S Sbjct: 103 LLAEVIECEHNASLLHDDVVDEAATRRGLEISFSLYGNQQAVWTGDFIIS 152 >gi|156547931|ref|XP_001604464.1| PREDICTED: similar to farnesyl diphosphate synthase [Nasonia vitripennis] Length = 364 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 25/204 (12%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV----LVGDFLLSQAFCMV 121 +L +E + L+ DDV+D S RRG+ W +++ + L+ QA + Sbjct: 97 ILGWCVEMVQAFFLVLDDVMDHSESRRGQPC----WYRHSNIGLAAINDGILIEQAVYQL 152 Query: 122 IETKSQ------EALEALSLVACTLAEGE-LRQL----SLSKNLDV-TEEDYLHVIKSKT 169 + T + + E L G+ L QL S NLD+ T + Y ++K KT Sbjct: 153 LRTHFRGKPCYVDLFETLQQNTLKTTMGQTLDQLATNFSKKPNLDLFTMDRYNSIVKYKT 212 Query: 170 AVL-FSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 F ++++ AGV++ RQA K+ + +G FQ+ DD LD G+ GK G Sbjct: 213 GYYSFVMPVQLAMYFAGVKDPEMHRQA-KTILLEMGHFFQVQDDYLDCFGDPQVTGKQ-G 270 Query: 227 EDFRNGKPTLPVILAFQRGTKREK 250 D + GK + V++A QR T ++ Sbjct: 271 TDIQEGKCSWLVVVALQRATPAQR 294 >gi|322797846|gb|EFZ19754.1| hypothetical protein SINV_16081 [Solenopsis invicta] Length = 246 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 7/162 (4%) Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DD+ D+S LRRG A V+G +S+ +++L A V+ + A L Sbjct: 2 DDIQDNSILRRGIPVAHSVFGIASSLSAANYVLFIALERVVNLQHSGATRVYMEQLLELH 61 Query: 142 EGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ + N TEEDY + KT LF+ A+ + L + Q + S Sbjct: 62 RGQGMDIFWRDNFICPTEEDYKTMTIRKTGGLFNLAVRLMKLFSTYQ----EDFSSLIAT 117 Query: 201 LGIAFQLVDDVLDY-RGEVNEMGKNIGEDFRNGKPTLPVILA 241 LG+ FQ+ DD + GE E K+ ED GK + P+I A Sbjct: 118 LGLYFQIRDDYCNLCLGEYTE-NKSYCEDLTEGKFSFPIIHA 158 >gi|302814167|ref|XP_002988768.1| hypothetical protein SELMODRAFT_13689 [Selaginella moellendorffii] gi|300143589|gb|EFJ10279.1| hypothetical protein SELMODRAFT_13689 [Selaginella moellendorffii] Length = 304 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 13/198 (6%) Query: 61 GDNHVLL--ACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 GD H L AC IE L DD+ +D++ R+G+ AA + + + T++L L + Sbjct: 84 GDRHAALPMACTIEMWMAIILTTDDLPCMDNARTRKGRAAAHVEFDDTTAILAAQALAAL 143 Query: 117 AFCMVIET------KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS-KT 169 AF V+++ K ++ SL L G+ + ++L+ EE L+ + KT Sbjct: 144 AFGTVVDSTLVSTDKRLRLVKEFSLSMQRLVYGQYDDVKKGESLETLEE--LNAKNTNKT 201 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 + F L +++ G + L+ +G G+ +Q+ DD+ D EMGK+ D Sbjct: 202 SSFFELPLVAGAIVGGAGEEEIEGLRRFGRYFGLMWQVNDDLSDATMTAEEMGKDASSDV 261 Query: 230 RNGKPTLPVILAFQRGTK 247 +N K T ++ +R + Sbjct: 262 KNRKTTYLTLVGAERSAQ 279 >gi|301105393|ref|XP_002901780.1| farnesyl pyrophosphate synthetase [Phytophthora infestans T30-4] gi|262099118|gb|EEY57170.1| farnesyl pyrophosphate synthetase [Phytophthora infestans T30-4] Length = 345 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 25/204 (12%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQAFCMVI 122 +L IE++ L+ DD++D+S RRG+ W + +V + D L +AF I Sbjct: 79 VLGWCIEWLQAFFLIADDIMDESITRRGQPC----WYRKPNVKMIAINDAFLLEAFVFQI 134 Query: 123 -------ETKSQEALEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSK 168 E + +E V G+L L+ S+ LD T E Y ++ +K Sbjct: 135 LKKHFRSEPYYVDLVETFHDVVFHTEIGQLLDLT-SQPLDGEVYLDRFTVERYRQIVINK 193 Query: 169 TAVL-FSAALEVSSLIAGVQNSVRQAL-KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 TA F + + + GV + +L K+ + +G FQ+ DD LD G+ +GK +G Sbjct: 194 TAYYTFYLSAACAMFLNGVVDEASHSLAKNICVQIGEYFQIQDDFLDCYGDEKVIGK-VG 252 Query: 227 EDFRNGKPTLPVILAFQRGTKREK 250 D ++ K + V+ A R T ++ Sbjct: 253 TDIQDNKCSWLVVQALDRATPEQR 276 >gi|146319410|ref|YP_001199122.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] gi|145690216|gb|ABP90722.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] Length = 164 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 3/108 (2%) Query: 10 KDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR-GDNHVLL 67 + +E+V +IL + + +V+Y + + GK LR L L A M E + + + Sbjct: 14 RGLEEVKSIILSEMMVLHPAVTAKIVEY-VEAPGKYLRAGLCLLFAQMTEGKISRSKLYF 72 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 A +E +H ATL+HDDV+D + RRG AA + N+ ++ GD+LL+ Sbjct: 73 AAHLEVLHLATLIHDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLLA 120 >gi|302675370|ref|XP_003027369.1| hypothetical protein SCHCODRAFT_86146 [Schizophyllum commune H4-8] gi|300101055|gb|EFI92466.1| hypothetical protein SCHCODRAFT_86146 [Schizophyllum commune H4-8] Length = 300 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 25/217 (11%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK +R L L L D +A + +H A+L+ DD+ D S RRG+ AA +V+ Sbjct: 12 GKDIRGRLIAGLNLWLNAPPDAVQAVAEVVAGLHAASLMLDDIEDSSDTRRGQPAAHIVY 71 Query: 102 GNQTSVLVGDFLLSQAFCMVIE-----TKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 G ++ G++ ++ + V + T + +LE + L E EL L + LD+ Sbjct: 72 GIPQTMNAGNYACAKVYADVKKLYPFLTAKKPSLEDV------LTE-ELLSLFRGQGLDI 124 Query: 157 ---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL-GIAFQ 206 TEE Y+ +I K + L A + S G N+ R + MNL GI Q Sbjct: 125 LWRDTHRCPTEEGYVRMINGKASGLLRLAARLLS-ACGTTNTDRDYVPL--MNLVGIFGQ 181 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + DD ++ K +D GK + P+I Q Sbjct: 182 IRDDFMNIYSTEYTNTKGFADDISEGKYSFPMIHGIQ 218 >gi|332287924|ref|YP_004422825.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci 6BC] gi|313848497|emb|CBY17501.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci RD1] gi|325506551|gb|ADZ18189.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci 6BC] gi|328915189|gb|AEB56022.1| geranyltranstransferase [Chlamydophila psittaci 6BC] Length = 293 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 24/211 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--R 91 V+Y + SGGKR+RPML A L+ G + + A AIEFIHT+TL+ DD+ R Sbjct: 36 VEYALTSGGKRIRPMLVCMIAKGLD-MGRDVLDSALAIEFIHTSTLIADDLPCMDDDDER 94 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMV---------IETKSQEALEALSLVA----- 137 RG+ + +++L L+ A+ + S+E A +++ Sbjct: 95 RGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLKSAGVDSKEVDYAYDMISDITDK 154 Query: 138 ----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G+ + + E +I KT LF A L G Sbjct: 155 NFGVHGVLGGQYEDMFFNNE---GPEHVQSIIHKKTGALFEIACVSGWLFGGGTPECVPQ 211 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 ++ + G+ FQ+ DD+LD + ++G N Sbjct: 212 VREFSQTFGLLFQIKDDILDIHQDDQDVGLN 242 >gi|329943348|ref|ZP_08292122.1| polyprenyl synthetase family protein [Chlamydophila psittaci Cal10] gi|328814895|gb|EGF84885.1| polyprenyl synthetase family protein [Chlamydophila psittaci Cal10] Length = 290 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 24/211 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--R 91 V+Y + SGGKR+RPML A L+ G + + A AIEFIHT+TL+ DD+ R Sbjct: 33 VEYALTSGGKRIRPMLVCMIAKGLD-MGRDVLDSALAIEFIHTSTLIADDLPCMDDDDER 91 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMV---------IETKSQEALEALSLVA----- 137 RG+ + +++L L+ A+ + S+E A +++ Sbjct: 92 RGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLKSAGVDSKEVDYAYDMISDITDK 151 Query: 138 ----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G+ + + E +I KT LF A L G Sbjct: 152 NFGVHGVLGGQYEDMFFNNE---GPEHVQSIIHKKTGALFEIACVSGWLFGGGTPECVPQ 208 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 ++ + G+ FQ+ DD+LD + ++G N Sbjct: 209 VREFSQTFGLLFQIKDDILDIHQDDQDVGLN 239 >gi|307211217|gb|EFN87417.1| Geranylgeranyl pyrophosphate synthetase [Harpegnathos saltator] Length = 324 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 7/212 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + Y++ + GK R L A L D + + +HT++++ DD+ D++ LRRG Sbjct: 31 MSYMLRTPGKAYRTTLAKAVNYWLRIPNDKLEDIIEIVNILHTSSIILDDIEDNAVLRRG 90 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 A V+G + ++ + A + + +A++ + L G+ + N Sbjct: 91 IPVAHSVYGIAHTTNAANYGMIIALERTLALQHPDAVKVFTEQLLELHRGQGSDIYWRDN 150 Query: 154 -LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 + TE +Y + KT LF + + L + +V LG FQ+ DD Sbjct: 151 HICPTELEYKITVVRKTGGLFKLLVRLMQLFTKFEENVAPLADM----LGYLFQIRDDYC 206 Query: 213 D-YRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + Y + ++M K ED GK + P++ A Q Sbjct: 207 NLYDKQYSDM-KGYCEDLTEGKFSFPIVHAVQ 237 >gi|281181748|dbj|BAI58053.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae] Length = 359 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 6/211 (2%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +Y+ GK R L A +L+ ++ A+ +H ++LL DDV D S LRRG Sbjct: 67 EYVASHPGKDFRSQLINAFNALLQVPPSRLDIITKAVGMLHESSLLVDDVQDSSELRRGF 126 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G ++ +++ A + + + + + +L G+ L L Sbjct: 127 PVAHNIFGVPQTINSANYIYFVALQELQKLGNPSNISVFADELVSLHRGQGMDLFWRDTL 186 Query: 155 D-VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG----MNL-GIAFQLV 208 TEE+YL ++ +KT LF +++ + V + + +NL G+ FQ+ Sbjct: 187 TCPTEEEYLEMVGNKTGGLFRLGIKLMQAESSVSSVSGSSSPPLDCVPLVNLVGLIFQIR 246 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 DD ++ + + K + ED GK + PVI Sbjct: 247 DDYVNLKSDEYSQHKGMCEDLTEGKFSYPVI 277 >gi|290976635|ref|XP_002671045.1| predicted protein [Naegleria gruberi] gi|284084610|gb|EFC38301.1| predicted protein [Naegleria gruberi] Length = 226 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 10/152 (6%) Query: 32 DVVKYLIF-SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL 90 D YLI + GK R L A + D ++ I+ +H A+LL DD+ D+S L Sbjct: 20 DPYSYLINNTNGKGFRSKLIDAFNEWFKLSEDELNVIKSIIDKLHNASLLVDDIEDNSKL 79 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 RRGK A L++G ++ +++ +A + + S + + A T+ EL L Sbjct: 80 RRGKPCAHLIYGTPATINCANYVYFEALKDIQKLNSSFSDQQSFSEAITVFMDELLLLHE 139 Query: 151 SKNLDV---------TEEDYLHVIKSKTAVLF 173 + D+ +E+DYL ++++KT LF Sbjct: 140 GQGCDIYWRDNGICPSEQDYLVMVQNKTGGLF 171 >gi|322796005|gb|EFZ18629.1| hypothetical protein SINV_08110 [Solenopsis invicta] Length = 338 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 25/232 (10%) Query: 41 GGKRLRPMLTLATALML--EYRGDNHVLL---ACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGK+ R ++ + ++ ++ +N L+ A +E A ++ DD+ D S RRG Sbjct: 40 GGKQFRALILIYAYQLVTNKFTKENMRLVRIVAWCMELTQAAAIMIDDLQDQSLFRRGNP 99 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIE--TKSQEA----LEALSLVACTLAEGELRQLS 149 + + + L + +I+ K +E +E + +G++ L Sbjct: 100 CWYRCDQIELAAITDALKLKHSIFYLIKKHCKGKECYVDLMETFEETSSKTVDGQILDLQ 159 Query: 150 LSKNLD-------VTEEDYLHVIKSKTAVLFSAALEVS--SLIAGVQN--SVRQALKSYG 198 LS N++ T + Y ++++KT+ +S L ++ +AG+++ S QA +S Sbjct: 160 LSTNVNKKPNLELFTMDTYNCIVRNKTS-YYSVVLPITIAMHLAGIKDRESFMQA-ESIS 217 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +G FQ+ DD LD G+ GK+ D ++GK T V+ A QR T ++ Sbjct: 218 LEIGRLFQIQDDFLDCFGDSEISGKD-STDIQDGKCTWFVVEALQRATPEQR 268 >gi|47097440|ref|ZP_00234987.1| heptaprenyl diphosphate syntase component II [Listeria monocytogenes str. 1/2a F6854] gi|47014195|gb|EAL05181.1| heptaprenyl diphosphate syntase component II [Listeria monocytogenes str. 1/2a F6854] Length = 115 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 11/115 (9%) Query: 203 IAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKI 262 +AFQ+ DDVLD+ G E+GK GED R G TLPV A E F K I+ +I Sbjct: 1 MAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAM------EDPFLKKRIS--QI 52 Query: 263 SVENLKKAFIIMREN---RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 + E + ++ E E A +Y +KA + L LP K L ++V Sbjct: 53 TEETPAEEIAVLVEEVKKTGAKQAEDVATTYLKKAVEILDSLPQVPELKPLKQIV 107 >gi|294816184|ref|ZP_06774827.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Streptomyces clavuligerus ATCC 27064] gi|294328783|gb|EFG10426.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Streptomyces clavuligerus ATCC 27064] Length = 396 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 20/191 (10%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA---- 97 G LRP+L + +AL + + A +E++H +L H S R V Sbjct: 99 GGLLRPLLLVRSALAVGGTLAPVLPAAVGLEYVHMGSLGHRTGAPGSDPGRRDVPGAPDP 158 Query: 98 ------RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL-AE-------G 143 RL G+ T+V++G L F + E ++ E C + AE G Sbjct: 159 RTAVYDRL--GSATAVVMGSTPLYAWFEALSECAARGVREDRIAAVCRVQAEAGRAVRAG 216 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 R+ + + LD+ E +L + TAV F+AA V + +AG AL YG LG+ Sbjct: 217 ATRERATAGRLDIEAEHWLETARLTTAVPFAAACRVGATLAGAPPEWTDALAVYGEQLGM 276 Query: 204 AFQLVDDVLDY 214 A +L +++ Y Sbjct: 277 ALRLQEELRPY 287 >gi|270641252|ref|ZP_06222125.1| geranyltranstransferase [Haemophilus influenzae HK1212] gi|270317343|gb|EFA28880.1| geranyltranstransferase [Haemophilus influenzae HK1212] Length = 220 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 2/107 (1%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + ++Y + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 114 EAMEYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDN 173 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 LRRG + + T++L GD L S AF ++ +T + + + L+L+ Sbjct: 174 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPNISSEQKLALI 220 >gi|255018351|ref|ZP_05290477.1| hypothetical protein LmonF_12731 [Listeria monocytogenes FSL F2-515] Length = 183 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 16/185 (8%) Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLV--------ACTLAEGELRQLSLSKNLDVTE 158 +L GD LL+ AF ++ E + ++L+ A + G+L + ++N VT Sbjct: 1 MLAGDALLTLAFSILAEDDNLSFETRIALINQISFSSGAEGMVGGQLADME-AENKHVTL 59 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 E+ + KT L A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ Sbjct: 60 EELSSIHARKTGELLIYAVTSAAKIAEADLEQTKRLRIFAENIGIGFQISDDILDVIGDE 119 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN----FWKSTINDGKISVENLKKA--FI 272 +MGK G D K T P +L G KR N KS ++ E L K I Sbjct: 120 TKMGKKTGADAFLNKSTYPGLLTLD-GAKRALNEHVTIAKSALSGHDFDDEILLKIADLI 178 Query: 273 IMREN 277 +REN Sbjct: 179 ALREN 183 >gi|326444518|ref|ZP_08219252.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] Length = 373 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 20/191 (10%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA---- 97 G LRP+L + +AL + + A +E++H +L H S R V Sbjct: 76 GGLLRPLLLVRSALAVGGTLAPVLPAAVGLEYVHMGSLGHRTGAPGSDPGRRDVPGAPDP 135 Query: 98 ------RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL-AE-------G 143 RL G+ T+V++G L F + E ++ E C + AE G Sbjct: 136 RTAVYDRL--GSATAVVMGSTPLYAWFEALSECAARGVREDRIAAVCRVQAEAGRAVRAG 193 Query: 144 ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 R+ + + LD+ E +L + TAV F+AA V + +AG AL YG LG+ Sbjct: 194 ATRERATAGRLDIEAEHWLETARLTTAVPFAAACRVGATLAGAPPEWTDALAVYGEQLGM 253 Query: 204 AFQLVDDVLDY 214 A +L +++ Y Sbjct: 254 ALRLQEELRPY 264 >gi|320103110|ref|YP_004178701.1| polyprenyl synthetase [Isosphaera pallida ATCC 43644] gi|319750392|gb|ADV62152.1| Polyprenyl synthetase [Isosphaera pallida ATCC 43644] Length = 364 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 38/222 (17%) Query: 21 KRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALMLEYRGDNHVL----LACAIEFI 74 +R + ++ P V + L F+ GGKR+RP L LA +L R + +A +E + Sbjct: 39 RRYACNPQVAPLVEEALKFTLEGGKRIRPRLCLAAYRILTQRFEPPPAPVWNVAVVLEAL 98 Query: 75 HTATLLHDDVVDDSALRRGK------------VAARLVWGNQTSVLVGDFLLSQAFCMVI 122 H L+HDD++D S RR + V+AR ++ GD++ F + I Sbjct: 99 HAFMLVHDDLMDQSLTRRDRPTLHERYREGLNVSARTA--GDLGIVAGDWM----FALAI 152 Query: 123 ETKSQEALEA--LSLVACTLAEGELRQLSLSKNLD----------VTEEDYLHVIKSKTA 170 + L+ L+ V +AE L + L ++LD +TEED + + KTA Sbjct: 153 RMLGRAGLQGTRLARVVRIIAE-MLIETGLGQSLDLLHDGRSLESITEEDITTLYRWKTA 211 Query: 171 -VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 S L + + +A + R+ L +G LG +Q+ +D+ Sbjct: 212 RYTVSGPLVLGAALANAPAATRRCLNRFGDLLGFGYQICNDL 253 >gi|218660042|ref|ZP_03515972.1| geranyltranstransferase protein [Rhizobium etli IE4771] Length = 194 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 2/101 (1%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVV 85 E + + Y + +GGKRLRP L + +A +L + + A+E +H +L+H + Sbjct: 40 ETLRSAMHYAVLNGGKRLRPFLVVESAALLGGDAQAALRIGAALECVHCYSLVHDDLPAM 99 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 DD +RRGK + + T++L GD LL+ AF +V ++ Sbjct: 100 DDDDMRRGKPTVHIKFDEATAILAGDSLLTYAFDIVAAPET 140 >gi|323454358|gb|EGB10228.1| hypothetical protein AURANDRAFT_71238 [Aureococcus anophagefferens] Length = 1365 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 15/195 (7%) Query: 43 KRLRPMLTLATALMLEYRG------DNHVLLACAIEFIHTATLLHDDVV-DDSALRRGKV 95 + RP + L A +E + LLA +E + TA ++HD V+ DD A G V Sbjct: 1057 RAFRPAVVLLVARAVEGTASGTTLPEKQCLLAEIVEMMCTAQVVHDSVLEDDEAGSTGNV 1116 Query: 96 AARLV---WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG---ELRQLS 149 A R GN+ SVL GDFLL++ + E +E ++ ++ +G + + Sbjct: 1117 AHRTYSQNAGNKVSVLAGDFLLARCSVALSELGDLAVVELMATALESMVQGGVLKAQAGL 1176 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQALKSYGMNLGIAFQL 207 + + + Y+ ++ KT+ L + A ++++ G +V +A+ +Y NLG+A+Q+ Sbjct: 1177 GGLDGLLDWDAYVARVELKTSSLIADACRSAAILGGEAADGAVAEAVYAYASNLGVAYQI 1236 Query: 208 VDDVLDYRGEVNEMG 222 D + Y G + E G Sbjct: 1237 NADTIAYVGALEEGG 1251 >gi|115461042|ref|NP_001054121.1| Os04g0657100 [Oryza sativa Japonica Group] gi|113565692|dbj|BAF16035.1| Os04g0657100 [Oryza sativa Japonica Group] gi|215704288|dbj|BAG93128.1| unnamed protein product [Oryza sativa Japonica Group] gi|222629693|gb|EEE61825.1| hypothetical protein OsJ_16465 [Oryza sativa Japonica Group] Length = 392 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/283 (22%), Positives = 123/283 (43%), Gaps = 47/283 (16%) Query: 41 GGKRLRPMLTLATALMLEYRGD---NHVLLAC----AIEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + L+L+ + + LAC +E+ LL DD++DDS RR Sbjct: 95 GGKLNRGLSVIDSYLLLKQGSEVTEDDFFLACVLGWCVEWFQACALLLDDIMDDSHTRRD 154 Query: 94 KVAAR-------------LVWGNQTSVLVGDFLLSQAFCM-VIETKSQEALEA-----LS 134 ++ ++ +++ + + + + ++E S+ AL+ L Sbjct: 155 QICWYRRPEVGLRGINDGIILKCHILIMIKKYFREKPYFLDILEIWSEIALQTSLGQMLD 214 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS--LIAGVQNSVRQ 192 L++ +L + S+ E Y ++K KTA +S L V++ L++G + Sbjct: 215 LISTHTGADDLAKYSI--------EGYRRIVKYKTAY-YSFYLPVANALLLSGAKLEDFS 265 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE--- 249 LK + +GI FQ+ DD LD + N +GK IG D + K + ++ A + Sbjct: 266 GLKDILIEMGIYFQIQDDYLDCFADPNTIGK-IGTDIEDHKCSWLIVQALGHADNNQIEV 324 Query: 250 --KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290 +N+ K + SV +K+ + + + E R Y++ Sbjct: 325 LHRNYGKKDSS----SVSEVKRTYAALDLKDIFSEFERRCYNH 363 >gi|156839045|ref|XP_001643218.1| hypothetical protein Kpol_457p11 [Vanderwaltozyma polyspora DSM 70294] gi|156113818|gb|EDO15360.1| hypothetical protein Kpol_457p11 [Vanderwaltozyma polyspora DSM 70294] Length = 332 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 20/235 (8%) Query: 24 CSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHD 82 SD E ++ YL GK R +L + +L+ + +HTA+LL D Sbjct: 15 SSDYEDIVQSPYNYLAQQPGKNFRSLLVKTFNQFYGLDEEQILLIDKLVGILHTASLLID 74 Query: 83 DVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV-------IETKSQEALEALSL 135 D+ D+S +RRG A L +G ++ +++ +A ++ I+ Q L Sbjct: 75 DIEDNSVIRRGMETAHLKYGIPMTINSANYMYFKAMEVLQDISKLHIKDSPQIDHNVLLK 134 Query: 136 VACTLAEGELRQLSLSKNLD----------VTEED-YLHVIKSKTAVLFSAALEVSSLIA 184 + EL L + LD + +ED Y +++ +KT LF A+ + + Sbjct: 135 ELMIIFNEELINLHRGQALDIYWRDTFPEIIPDEDMYFNMVMNKTGGLFRLAVRIMETLN 194 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 G + ++L LGI +Q+ DD+ + + K ED GK + P+I Sbjct: 195 G-NSKDSKSLVPLANLLGILYQVRDDLQNLTDQNMIEKKGYAEDISEGKLSFPII 248 >gi|119470882|ref|XP_001258098.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] gi|119406250|gb|EAW16201.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] Length = 764 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 3/171 (1%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 ++ +H A+L+ DD+ D S RRG+ A ++G+ ++ +F+ QA + + ++ A+ Sbjct: 504 VDLLHNASLILDDIEDHSPKRRGRPATHTIFGHSQAINSANFMFVQAVQVARQFRNPNAV 563 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + L L G+ L L + +YL+++ +KT L + + A + + Sbjct: 564 DILLEELENLYLGQSWDLDWKYKLRCPSPSEYLNMVDNKTGG--LFRLLLRLMQAERKGT 621 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L + G FQ+ DD ++ R + K ED GK + P+++ Sbjct: 622 TEVDLDGLTVLFGRFFQIRDDYMNLRSGLYTEQKGFCEDLDEGKFSYPIVV 672 >gi|89897810|ref|YP_514920.1| geranylgeranyl pyrophosphate synthase [Chlamydophila felis Fe/C-56] gi|89331182|dbj|BAE80775.1| geranylgeranyl pyrophosphate synthase [Chlamydophila felis Fe/C-56] Length = 290 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 89/210 (42%), Gaps = 22/210 (10%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--ACAIEFIHTATLLHDDVVDDSAL- 90 V+Y + SGGKR+RPML + L G N +L A AIEFIHT+TL+ DD+ Sbjct: 33 VEYALTSGGKRIRPMLVCMFSKGL---GMNRDVLDSALAIEFIHTSTLIADDLPCMDDDD 89 Query: 91 -RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET----KSQEA-LEALSLVACTLAEGE 144 RRG+ + +++L L+ A+ + KSQ + T++E Sbjct: 90 ERRGRPTVHKAFDEASALLASYALIPAAYSRIRSNAKKLKSQGVDPREVDFAYDTISEIT 149 Query: 145 LRQLSLSKNLDVTEEDYL----------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + ++ L ED +I KT LF A L G + Sbjct: 150 DKNFGVNGVLGGQYEDMFFKNEGPEYVQSIINKKTGALFEIACASGWLFGGGDPLCVPQI 209 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + G+ FQ+ DD+LD + ++G N Sbjct: 210 LEFSKTFGLLFQMKDDILDIHQDDQDVGLN 239 >gi|146413673|ref|XP_001482807.1| hypothetical protein PGUG_04762 [Meyerozyma guilliermondii ATCC 6260] Length = 329 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 37/252 (14%) Query: 18 LILKRICSDVEMIPDVVK----YLIFSGGKR--LRPMLTLATALMLEYRGDNHVLLACAI 71 LI I S +MIPD ++ YL G +R + + L + DNH +A Sbjct: 3 LIDTLIYSQPQMIPDAIRLPYDYLAAIPGTNGDIRTQF-IKSFNDLYFTIDNHDTIATIS 61 Query: 72 EFI---HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 E I H ++LL DD+ D S RRG AA +G ++ G+ + + + ++T Q+ Sbjct: 62 EVITVFHNSSLLIDDIEDGSEFRRGLPAAHTKYGVALTLNCGNLM----YFVALQTAQQK 117 Query: 129 -------------ALEALSLVA---CTLAEGELRQLSLSKNLDVTE----EDYLHVIKSK 168 AL L+++ L G+ + +L T+ E+Y+ +I +K Sbjct: 118 LPQYHPSDNKNDIALSILNILVEELLNLHHGQGLDIHWRDHLKTTKLPLIEEYMEMIMNK 177 Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE-VNEMGKNIGE 227 T LF A+++ + Q+ + + GI FQ+ DD+++ + + M GE Sbjct: 178 TGGLFRLAVKLLGAFSTPQD--EPTVLAIANLFGIVFQIRDDLMNLVDDKYSHMKGMKGE 235 Query: 228 DFRNGKPTLPVI 239 D GK +LP++ Sbjct: 236 DLVEGKLSLPIL 247 >gi|73961593|ref|XP_537252.2| PREDICTED: similar to farnesyl diphosphate synthase [Canis familiaris] Length = 420 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 33/252 (13%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQAFCM--VIETK 125 +E + L+ DD++D S RRG++ W + + + D LL +A C+ +++ Sbjct: 159 VELLQAFFLVSDDIMDSSLTRRGQIC----WYQKPGIGLDAINDALLLEA-CIYRLLKVY 213 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL 172 +E L+L+ L Q + + LD+ TE+ Y ++K KTA Sbjct: 214 CREQPYYLNLIELFLQSS--YQTEIGQTLDLITAPQGSVDLSRFTEKRYKSIVKYKTA-F 270 Query: 173 FSAALEVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 +S L V++ +AG+ A K + +G FQ+ DD LD G+ + GK IG D Sbjct: 271 YSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDFLDLFGDPSVTGK-IGTDI 329 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAY 288 ++ K + V+ Q+ + ++ + N G+ E + + + E N V T+Y Sbjct: 330 QDNKCSWLVVQCLQQASPEQRKVLQE--NYGQKEAEKVARVKALYEELNLPAVFTQYEED 387 Query: 289 SYGQKAKDSLRC 300 SY + RC Sbjct: 388 SYSRLMSLIERC 399 >gi|254410383|ref|ZP_05024162.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196182589|gb|EDX77574.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 324 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 10/136 (7%) Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + S L +G+ R L +NL +T EDY H I+ K A F A L + Sbjct: 140 QHFSQTGLHLLKGQDRDL---RNLTLTIEDYWHTIEEKNASAFVLACTAGGLCGPDNPKL 196 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 A + +G +LG+A QL D D+ G + G+ D GK TLPVI R Sbjct: 197 LDACRRFGYHLGLALQLFD---DFEGIWGQSGRG---DLVMGKITLPVIYGLNVAHNRRD 250 Query: 251 NFWKSTINDGKISVEN 266 K I+D ++ E+ Sbjct: 251 ELQK-LIDDASLAKES 265 >gi|156378051|ref|XP_001630958.1| predicted protein [Nematostella vectensis] gi|156217989|gb|EDO38895.1| predicted protein [Nematostella vectensis] Length = 393 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 42/257 (16%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTA L+H+ VVD +A+ K + +GN+ SVL GDFLL+ A + + + Sbjct: 160 EMIHTAYLIHNGVVDLAAVPT-KEFKDMEFGNKMSVLTGDFLLANACTGLAALNDTQVVA 218 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VIKSKTAVLFS---AALEVSSLIAGV 186 +S V L EG + +S + DY V KSK ++L + AAL++ S + Sbjct: 219 MISTVISHLMEGRV----MSSEYNTLTLDYWKEIVFKSKASLLANSCQAALKLLSHSTEL 274 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL-----PVILA 241 Q + +G N+ A L D++ E+ ++ +P + VIL+ Sbjct: 275 QEKAYE----FGKNIAFAQHLKDEL---------------ENLQSNQPAMTLNSASVILS 315 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS----YGQKAKDS 297 + +K K N I E L + + E+ D R + Y Q A D+ Sbjct: 316 LAE-PQVQKMVKKVRENSNPIKNERLGRKIM---EHVIAGDAPRRMKTLLMEYSQGALDA 371 Query: 298 LRCLPDSSWKKSLMEVV 314 + P+S +++L+ ++ Sbjct: 372 VLYFPESEARQALLNII 388 >gi|119481385|ref|XP_001260721.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] gi|119408875|gb|EAW18824.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] Length = 702 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 3/180 (1%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 + +TLL DD+ D S LRRGK AA L +G +V FL ++A +E + L+ + Sbjct: 455 LFNSTLLLDDIEDGSTLRRGKPAAHLKFGLGQTVNTATFLHAEAVGYTLEHLGPDCLKIV 514 Query: 134 SLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 TLA G+ L+ + N T +Y ++ KT F L ++G + + Sbjct: 515 LDEIKTLARGQALDLNWTFNKTRPTLNEYFIMVDHKTGGFFRLLLRGLCSLSG--SGLDP 572 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 L+ +G +Q+ DD + + K +D GK + PV+ + K ++ F Sbjct: 573 DLEHLITLIGRYYQIRDDYQNLASDEYTAKKGFCDDLDEGKFSFPVLHLLEHSPKSDELF 632 >gi|145616288|ref|XP_360889.2| hypothetical protein MGG_03432 [Magnaporthe oryzae 70-15] gi|145010025|gb|EDJ94681.1| hypothetical protein MGG_03432 [Magnaporthe oryzae 70-15] Length = 711 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 3/209 (1%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E+I ++Y+ K R L + L+ + I +H ++L+ DD+ D+ Sbjct: 411 EVIQAPIRYIQSMPSKGFRSALVDCYSRWLDVPAREMESIKSVINCLHDSSLILDDIEDN 470 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A +V+G ++ +L QA + ++E ++ L L G+ Sbjct: 471 SRLRRGFPATHVVYGAGPAINSATYLYVQAVAAINSLDNREMMDVLLRQLQNLFLGQSLD 530 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS--VRQALKSYGMNLGIA 204 L + N T ++YL ++ KT S E+ + V + R A ++ G+ Sbjct: 531 LHWTANRQCPTRDEYLGMVGQKTGAFISMVAELMIAASNVNSPEKTRAAFAAFSHLSGLY 590 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 +Q+ DD L+ K ED K Sbjct: 591 YQVRDDYLNITSAEYADKKGFAEDLDEQK 619 >gi|62959167|gb|AAY23691.1| farnesyl diphosphate synthase [Roseobacter litoralis Och 149] Length = 144 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%) Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE-----ALSLVACTLAEGEL 145 RRG+ W + T+VL GD L + AF +V + + E ALSL + A+G Sbjct: 13 RRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASPSAEVRADLALSLARASGAQG-- 70 Query: 146 RQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 + L + LD+ E + + + KT L + + + +A ALK Sbjct: 71 --MVLGQALDIAAETAHTPLSLDEITRLQQGKTGALIGWSAQAGARLAQADTG---ALKR 125 Query: 197 YGMNLGIAFQLVDDVLD 213 Y LG+AFQ+ DD+LD Sbjct: 126 YAQALGLAFQIADDILD 142 >gi|89894981|ref|YP_518468.1| hypothetical protein DSY2235 [Desulfitobacterium hafniense Y51] gi|219669383|ref|YP_002459818.1| hypothetical protein Dhaf_3364 [Desulfitobacterium hafniense DCB-2] gi|89334429|dbj|BAE84024.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539643|gb|ACL21382.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2] Length = 251 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 9/159 (5%) Query: 47 PMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS 106 P++ LA + + + LA ++I A +H + DD L K Q Sbjct: 47 PLIVLAVSQTFGGAARSAIGLATIFQYIFMADQVHRLMKDDPDLEESK--------RQFP 98 Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166 VLVGDFL + F + + K L L+ V + +G + + LS++ V++ +Y+ I+ Sbjct: 99 VLVGDFLYGKFFLSLCKEKMLHFLAPLAKVIENMNQGAIIRW-LSRDKKVSDGEYIRTIE 157 Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 + A L A + + +AG V++ ++ G NLGIA+ Sbjct: 158 MERASLTGLAARLGAELAGCPLKVQEQCETIGWNLGIAW 196 >gi|296939580|gb|ADH95185.1| putative farnesyl diphosphate synthase [Aquilaria microcarpa] Length = 342 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 32/245 (13%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTSVLVGDFL 113 L IE++ L+ DD++D+S RRG+ V ++ N S ++ + Sbjct: 78 LGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRLPKVGLIAVNDGILLRNHISRILKNHF 137 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 +A+ + + E + Q A + + L+ E +L + SLSK + +++ Sbjct: 138 RGKAYYVDLLDLFNEVEFQTACGQMIDLITTLEGEKDLTKYSLSK--------HRRIVQY 189 Query: 168 KTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KTA F + + L++G +K+ +++GI FQ+ DD LD G +GK IG Sbjct: 190 KTAYYSFYLPVACALLMSGENLDNHVDVKNILVDMGIYFQVQDDFLDCFGAPETIGK-IG 248 Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEY 285 D + K + V+ A + + +K N GK + EN+ K + E N +V EY Sbjct: 249 TDIEDFKCSWLVVKALELCNEEQKKVLYD--NYGKDNAENVAKVKALYNELNLKVVFEEY 306 Query: 286 RAYSY 290 + SY Sbjct: 307 ESKSY 311 >gi|194382874|dbj|BAG58993.1| unnamed protein product [Homo sapiens] Length = 153 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 5/131 (3%) Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A Q+ + Sbjct: 26 VHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMN 85 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + G ++ +A + ++ + T Y A Y +A + L S + + Sbjct: 86 AMIMRRFSLPG-----DVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPERDA 140 Query: 310 LMEVVDFCLQR 320 L+++ + L R Sbjct: 141 LIQLSEIVLTR 151 >gi|307215481|gb|EFN90138.1| Farnesyl pyrophosphate synthetase [Harpegnathos saltator] Length = 356 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 35/261 (13%) Query: 20 LKRICSDVEMIPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDNHV-------- 65 L +C + IP++ K++ GGK+ R L L A + D Sbjct: 31 LTEVCQHSD-IPNISKWIAKVLQYNVPGGKKTRG-LALVYAYKMLVSSDQITEENIRAIR 88 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +LA +E +H ++ DD+ D S RR + L + + D L+ ++ + K Sbjct: 89 ILAWCVELLHAFFIMIDDIQDRSQFRRNQPCWYLH-NDMGLAAINDSLMIESIMYQLLRK 147 Query: 126 S----------QEALEALSLVACTLAEGELRQLSLSK--NLDV-TEEDYLHVIKSKTAVL 172 S E + ++L +L+ + K NL++ T + Y ++ K++ Sbjct: 148 SFSGKNCYVDLVETFQDITLKTILGQSLDLQSTNFGKMPNLNLFTMDRYNSIVNYKSSYY 207 Query: 173 -FSAALEVSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 F + V+ +AG+ Q RQA K+ + +G FQ+ DD LD G+ GK IG D Sbjct: 208 TFILPVTVAMHVAGIKDQEMFRQA-KTILLEMGHFFQVQDDYLDCYGKPEITGK-IGSDI 265 Query: 230 RNGKPTLPVILAFQRGTKREK 250 GK T V++A QR T ++ Sbjct: 266 EEGKCTWLVVVALQRVTPEQR 286 >gi|2957271|gb|AAC05595.1| geranylgeranyl pyrophosphate synthase [Drosophila melanogaster] Length = 335 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 9/224 (4%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E++ Y+ GK+ R L LA L G+ + ++ +H ++LL + D+ Sbjct: 22 EILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGNIVQMLHNSSLL---IEDN 78 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S LRRG A ++G +++ ++ L A V + E + + L G+ + Sbjct: 79 SILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEVRKVYTEQLLELHRGQGME 138 Query: 148 LSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + + +E DY + KT LF A+ + L + S ++ LG+ FQ Sbjct: 139 IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS----SNKEDYSKLTAILGLYFQ 194 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + DD + + + K+ ED GK PVI A R K++K Sbjct: 195 IRDDYCNLSLKEVSVNKSFAEDLTEGKFGFPVIHAV-RTQKQDK 237 >gi|145609303|ref|XP_001409359.1| hypothetical protein MGG_13405 [Magnaporthe oryzae 70-15] gi|145016690|gb|EDK01120.1| hypothetical protein MGG_13405 [Magnaporthe oryzae 70-15] Length = 728 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 18/226 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + +Y+ K +R L L LE + + I+ +H ++L+ DD+ D S LR Sbjct: 423 EPARYIRQMPSKNMRSQLMDCFNLWLEVPQPSLAAIKETIDCLHHSSLILDDIEDGSDLR 482 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG AA +V+G ++ L QA + S+E + V L QL + Sbjct: 483 RGLPAAHIVYGVGQAINSATHLHVQAVANMHAMASREGRPQMMDVFLH----HLNQLFIG 538 Query: 152 KNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIA-----GVQNSVRQALKSY 197 ++ D+ TEE YL++I KT + LE+ A GV + L + Sbjct: 539 QSWDLHWTFHRRCPTEEKYLNMIDQKTGAMLQMLLELMQTAAAAAKQGVLKDGKHLLWEF 598 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G FQ+ DD ++ E K D K + ++ F+ Sbjct: 599 TRLFGRFFQVRDDYMNTLSTEYERQKGFASDLNEQKLSYMLVHMFE 644 >gi|310800265|gb|EFQ35158.1| polyprenyl synthetase [Glomerella graminicola M1.001] Length = 742 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 38/218 (17%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 + +H A+L+ DDV D+S +RRG +A +V+G + +L+ + C+ + + Sbjct: 482 VRIMHNASLMLDDVQDNSPVRRGSPSAHVVFGTAQTTNSASYLMIK--CVDLARRLGN-- 537 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSS 181 ++C L+ EL QL L ++ D+ + +Y ++ KT LF A + Sbjct: 538 ---DTLSCLLS--ELGQLHLGQSHDLAWTFHCRAPSMPEYYSHLEQKTGGLFRMASRMMR 592 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 A QN A K + LG +QL DD D E + +D G TLP+I A Sbjct: 593 ASA-TQNKHLDACKLMSL-LGRLYQLRDDYQDITSE----SLSTYDDLDEGSFTLPLIHA 646 Query: 242 FQR--------------GTKREKNFWKSTINDGKISVE 265 QR + ++ S+ N+G++SVE Sbjct: 647 LQRENEHGDVQLHSILQSARAARSASTSSNNNGRLSVE 684 >gi|146424706|dbj|BAF62113.1| farnesyl diphosphate synthase [Bombyx mori] Length = 427 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 41/255 (16%) Query: 30 IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGD---NHVLLA----CAIEFIHT 76 +P+ K+L GK+ R + T+ MLE + + ++LLA +E HT Sbjct: 112 VPEASKWLAKLLQYNVPNGKKNRGLATILAYKMLEKKENLTPENILLANVMGWCVEMFHT 171 Query: 77 ATLLHDDVVDDSALRRGKVA--------------ARLVWGNQTSVLVGDFLLSQAFCMVI 122 LL +D+++ + +RRG A L+ + + F + V+ Sbjct: 172 HQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDAALIQSAMYTSVKRHFNSKPYYNYVL 231 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDV---TEEDYLHVIKSKTAVL-FSAALE 178 ET ++ L+ C++ + + + D+ T E Y + K KT+ F + Sbjct: 232 ETFNE------MLMKCSMGHYVQKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTFQMPVS 285 Query: 179 VSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++ L+ GV + + RQA K+ + +G FQ+ DD LD G+ + + G D ++GK T Sbjct: 286 LALLMTGVDDPETHRQA-KTILLKMGEFFQIQDDFLDCFGDPT-VTEKYGTDIQDGKCTW 343 Query: 237 PVILAFQRGTKREKN 251 ++A QR T +K Sbjct: 344 LAVVALQRATPAQKQ 358 >gi|66800205|ref|XP_629028.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium discoideum AX4] gi|74850574|sp|Q54BK1|GGPPS_DICDI RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|60462385|gb|EAL60606.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium discoideum AX4] Length = 303 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 24/227 (10%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDD 83 SD ++I + Y+ S GK R L + L+ GD V ++ I+ +H A+LL DD Sbjct: 15 SDFKLI-EPYTYICESSGKGFRNALIKSFDYWLKV-GDEKVQDISKVIQGLHGASLLIDD 72 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEG 143 + D+S LRRGK A ++G ++ +F+ + ++++ ++ A T+ Sbjct: 73 IEDNSKLRRGKPVAHSIYGIPQTINSANFV----YFLIMDQCNKLG----DPKATTIFIE 124 Query: 144 ELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 EL +L + D+ +E++Y++++ KT LF L + + + + Sbjct: 125 ELIRLHRGQGYDIFWRDTNTSPSEQEYMNMVNEKTGGLFRLGLRLLQAFSDNNTNYIDLV 184 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +LG+ +Q+ DD+++ + K+ ED GK + P+I A Sbjct: 185 E----DLGMYYQIRDDLINLVSVDYQQNKSFCEDISEGKFSFPIIHA 227 >gi|221132081|ref|XP_002160031.1| PREDICTED: similar to farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Hydra magnipapillata] Length = 477 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 108/240 (45%), Gaps = 28/240 (11%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRG------DNHVLLACAIEFIHTATLLHDDVV 85 D + Y F G K+ R M+ + + L+ D + L +E + L+ DD++ Sbjct: 173 DALSYNAFDG-KKSRGMMVICSLDFLKNGNVTNSEVDKALCLGWCVEILQAVFLVADDIM 231 Query: 86 DDSALRRGKVAARLVWGNQTSV--LVGDFLLSQAFCMVI------ETKSQEALEALSLVA 137 D S +RRGK W + + + +L+ Q +I E + ++ + Sbjct: 232 DRSEIRRGKPC----WYKKCGLRAINDTYLMEQCIYALIDKHFMNEPYLVDLYKSFHRIT 287 Query: 138 CTLAEG-ELRQLSLSKN-----LDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQN-S 189 A G EL L+ N + TE+ Y ++K KTA F + + ++A +++ Sbjct: 288 YLTAMGQELDMLASEPNGNFTIRNFTEDKYKSIVKYKTAYYSFYLPVSLGMILANIKDMK 347 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 + +++ M LG FQ+ DD LD G+ ++GK +G D +GK + ++ A + + E Sbjct: 348 LYAEVENILMKLGELFQIQDDYLDCYGDPAKIGK-VGRDIEDGKCSWLIVQALRLASTEE 406 >gi|148688711|gb|EDL20658.1| mCG16244 [Mus musculus] Length = 212 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 10/205 (4%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 D +YL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S LR Sbjct: 14 DPYRYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSSKLR 73 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 G A + G + + +++ V+ +A++ + L +G+ + Sbjct: 74 HGFPVAHSICGVPSVINSANYVYFLGLEKVLTLDHPDAMKLFTRQLLELHQGQGLDIYWR 133 Query: 152 KNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ--NSVRQALKSYGMNLGIAFQLV 208 TEE+Y ++ KT F L+ G+ + ++ LK LG+ FQ+ Sbjct: 134 DTYTCPTEEEYKAMVLQKTGGSF-------GLVVGLMQFSDFKEDLKPLLDTLGLFFQIR 186 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGK 233 DD + + K+ ED GK Sbjct: 187 DDYANLHSKEYSENKSFCEDLTEGK 211 >gi|145641598|ref|ZP_01797175.1| geranyltranstransferase [Haemophilus influenzae R3021] gi|145273645|gb|EDK13514.1| geranyltranstransferase [Haemophilus influenzae 22.4-21] Length = 163 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 2/97 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSA 89 + +KY + GGKR+RP L AT ML A AIE IH +L+HDD+ +DD Sbjct: 35 EAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDN 94 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LRRG + + T++L GD L S AF ++ +T + Sbjct: 95 LRRGHPTCHIQFDEATAILAGDALQSFAFEILTKTPN 131 >gi|91978222|ref|YP_570881.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5] gi|91684678|gb|ABE40980.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5] Length = 288 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 7/206 (3%) Query: 34 VKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++ +F G R+RP L + AL E A+E +H A+L+HDD+ D + + Sbjct: 31 MRSAVFPRGARVRPRLCHSVALACGEDNPAATEAAGAALELMHCASLVHDDLPCFDGADI 90 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK-SQEALEALSLVACTLAEGELRQLS 149 RRG+ + +G +VL GD L+ AF + + + L L+ V L ++ Sbjct: 91 RRGRPSVHKAFGEPLAVLTGDALIVLAFQTIARVNCAPDRLLKLTQVVGGAVGVPLGIVA 150 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 +E + H +SKT LF AA + AG + + G +G A+Q+ D Sbjct: 151 GQAWECESEINLAHYHRSKTGALFVAATAAGAASAGADP---EPWRLVGEKIGEAYQVAD 207 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPT 235 D+ D + +E+GK +G+D + +P+ Sbjct: 208 DLRDAAADEDEIGKPVGQDIAHDRPS 233 >gi|195436322|ref|XP_002066117.1| GK22106 [Drosophila willistoni] gi|194162202|gb|EDW77103.1| GK22106 [Drosophila willistoni] Length = 411 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 18/200 (9%) Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H L C +E + + ++ DDV+D+S RRG++ V G + + ++ A V++ Sbjct: 147 HYLGWC-VEMLQSFFIMSDDVMDNSTTRRGQLCWHRVEGVGLTAINDTLMVENAMFAVLK 205 Query: 124 TKSQ---------EALEALSLVACTLAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVL- 172 E +S + T L Q++ + + + T ++Y ++ +KTA Sbjct: 206 KHFSHLDCYVDLMELFHEISFI--TTCGQTLDQINSHRKVSEFTMDNYKSIVYNKTAYYT 263 Query: 173 FSAALEVSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 F ++ +AG ++ + RQ+ K+ + +G FQ+ DD LD G + GK IG D + Sbjct: 264 FYLPFALAMHLAGFKDAEAFRQS-KTILLEMGHFFQVQDDFLDCFGNPDVTGK-IGTDIQ 321 Query: 231 NGKPTLPVILAFQRGTKREK 250 + K + ++A QR +K Sbjct: 322 DNKCSWLAVVAMQRANAEQK 341 >gi|317506409|ref|ZP_07964214.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974] gi|316255289|gb|EFV14554.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974] Length = 354 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 3/181 (1%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A A + + L+HDD+VD R G+ A +G +V +GD LL+ AF + + + Sbjct: 85 VAAANTLLMASALVHDDLVDHDECRYGRAAVWKAFGAPAAVHLGDALLALAFRTLRDAPA 144 Query: 127 ---QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 E + ++ A T+ G+ + + +N + E + V +K + L Sbjct: 145 GARDEIQDRMAACAQTMYAGQAAETLVEQNRAGSLEQVIDVAAAKAGNPVEYFVASGVLC 204 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G A +G++ G+AFQ +D+ + + + D R + T PV A+Q Sbjct: 205 SGAPADSVSAAAEFGLSFGMAFQFRNDLENIWDNPHGDLHDPLSDLRERRVTAPVAFAWQ 264 Query: 244 R 244 + Sbjct: 265 Q 265 >gi|116309645|emb|CAH66696.1| OSIGBa0158D24.4 [Oryza sativa Indica Group] gi|218195739|gb|EEC78166.1| hypothetical protein OsI_17740 [Oryza sativa Indica Group] Length = 392 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/283 (22%), Positives = 122/283 (43%), Gaps = 47/283 (16%) Query: 41 GGKRLRPMLTLATALMLEYRGD---NHVLLAC----AIEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + L+L+ + + LAC +E+ LL DD++DDS RR Sbjct: 95 GGKLNRGLSVIDSYLLLKQGSEVTEDDFFLACVLGWCVEWFQACALLLDDIMDDSHTRRD 154 Query: 94 KVAAR-------------LVWGNQTSVLVGDFLLSQAFCM-VIETKSQEALEA-----LS 134 ++ ++ +++ + + + + ++E S+ AL+ L Sbjct: 155 QICWYRRPEVGLRGINDGIILKCHILIMIKKYFREKPYFLDLLEIWSEIALQTSLGQMLD 214 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS--LIAGVQNSVRQ 192 L+ +L + S+ E Y ++K KTA +S L V++ L++G + Sbjct: 215 LIGTHTGADDLAKYSI--------EGYRRIVKYKTAY-YSFYLPVANALLLSGAKLEDFS 265 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE--- 249 LK + +GI FQ+ DD LD + N +GK IG D + K + ++ A + Sbjct: 266 GLKDILIEMGIYFQIQDDYLDCFADPNTIGK-IGTDIEDHKCSWLIVQALGHADNNQIEV 324 Query: 250 --KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290 +N+ K + SV +K+ + + + E R Y++ Sbjct: 325 LHRNYGKKDSS----SVSEVKRTYAALDLKDIFSEFERRCYNH 363 >gi|159470041|ref|XP_001693168.1| farnesyl diphosphate synthase [Chlamydomonas reinhardtii] gi|158277426|gb|EDP03194.1| farnesyl diphosphate synthase [Chlamydomonas reinhardtii] Length = 360 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 23/241 (9%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQAFCMVI- 122 L IE++ L+ DD++D S RRG+ W Q V D++L + I Sbjct: 96 LGWCIEWLQAFFLVADDIMDGSITRRGQP----CWYKQPKVGMIACNDYILLECCIYSIL 151 Query: 123 ------ETKSQEALEALSLVACTLAEGELRQLSLSK--NLDV---TEEDYLHVIKSKTAV 171 + ++ + G+L L+ + ++D+ TE++YL ++ KTA Sbjct: 152 KRHFRGHAAYAQLMDLFHETTFQTSHGQLLDLTTAPIGSVDLSKYTEDNYLRIVTYKTAY 211 Query: 172 L-FSAALEVSSLIAGVQNSVRQAL-KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 F + ++AG+ + L K+ + +G FQ+ DD LD G+ +GK IG D Sbjct: 212 YSFYLPVACGMVLAGITDPAAFDLAKNICVEMGQYFQIQDDYLDCYGDPEVIGK-IGTDI 270 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKI-SVENLKKAFIIMRENRALVDTEYRAY 288 + K + V A + T+ +K K+ + SV +K ++ + + D E +Y Sbjct: 271 EDNKCSWLVCTALKIATEEQKEVIKANYGHKEAESVAAIKALYVELGIEQRFKDYEAASY 330 Query: 289 S 289 + Sbjct: 331 A 331 >gi|291000304|ref|XP_002682719.1| predicted protein [Naegleria gruberi] gi|284096347|gb|EFC49975.1| predicted protein [Naegleria gruberi] Length = 310 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 113/259 (43%), Gaps = 34/259 (13%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQAFCMVI 122 +L IEF+ L+ DD++D S RRG+ W V D+L+ ++ +I Sbjct: 38 ILGWCIEFLQAFFLIADDIMDASVTRRGQPC----WYKLNDVKMTACNDYLIVESQIYII 93 Query: 123 ETKSQEA------LEALSLVACTLAEGELRQL-SLSKNLD-----------VTEEDYLHV 164 K + ++ V+ G+L L SL N+D T E Y + Sbjct: 94 LKKYFKNDLYVPLVDLFHQVSYMTELGQLHDLRSLPPNVDKNSSDEIPFHTFTIETYSLI 153 Query: 165 IKSKTAVL-FSAALEVSSLIAG-VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 +K KTA F L +++G + ++R+ + +G FQ+ DD LD G+ +G Sbjct: 154 VKYKTAFYSFYLPLYCGLILSGKLDENIRKQTLDISIAMGEYFQIQDDYLDCYGDPEHIG 213 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282 K IG D + K + V+ A + + + KS N GK E +K +++E A ++ Sbjct: 214 K-IGRDIEDCKCSWMVVNALKLANEEQLTVLKS--NYGKEEPEKVK----LVKELYAQLN 266 Query: 283 TEYRAYSYGQKAKDSLRCL 301 E Y + A +S+ L Sbjct: 267 LEQLYKDYEKSAIESMNQL 285 >gi|213402169|ref|XP_002171857.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus yFS275] gi|211999904|gb|EEB05564.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus yFS275] Length = 341 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 24/252 (9%) Query: 41 GGKRLRPMLTLATALML---EYRGDNH---VLLACAIEFIHTATLLHDDVVDDSALRRGK 94 GGK R L + +L E D H LL +E + + L+ DD++D S RRG+ Sbjct: 43 GGKGTRGKAVLESVKVLLGTELTDDMHEKSCLLGWIVEMLQGSFLVADDIMDKSLTRRGR 102 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEALEALSLVACTLAEGELRQLS 149 L G + + + F ++ + +E L+ + G+ L Sbjct: 103 PCWYLQVGTSRAFTEAVMMENLVFVLLRLFFRDQPYYKELLDTFHEILLQTETGQEMDLI 162 Query: 150 LS-----KNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQAL---KSYGMN 200 LS N + + Y ++ KTA F ++ + ++ G++ +QA K + Sbjct: 163 LSIGGVPMNTSFSLKAYEFIVTYKTAYYSFYLPIKCAMILVGMKE--KQAYVDAKRLAVQ 220 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 LG FQ DD LD G+ N +GK IG D R K T + A + + E+ S Sbjct: 221 LGRYFQFQDDFLDCYGDSNVVGK-IGTDIRERKCTWLICYALYKASPEERELLLSNYGKH 279 Query: 261 KISVEN-LKKAF 271 + EN +KK + Sbjct: 280 DMESENTIKKLY 291 >gi|118379849|ref|XP_001023090.1| Polyprenyl synthetase family protein [Tetrahymena thermophila] gi|89304857|gb|EAS02845.1| Polyprenyl synthetase family protein [Tetrahymena thermophila SB210] Length = 465 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 26/298 (8%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL-RRGKVAARL 99 GGKR+RP+ AL+ E + L+ + + +L RR K A + Sbjct: 174 GGKRIRPIFC---ALIAEAYNHKLTIQKMIGNIFKMNYLIVQQIANLKSLKRREKDAVHI 230 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACTLAEGELRQLSLSKNLDV- 156 ++G S+ ++ ++ K +Q+ + LSL+ E+ Q+ L + D+ Sbjct: 231 IYGVDISINAANYGYYAPLNYLLNLKKYNQKTISQLSLIYAY----EMSQIHLGQGWDLL 286 Query: 157 ------------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIA 204 TE+ YL ++ +KT LF + + ++ ++ + L + +G Sbjct: 287 WHNQKKESLKIPTEQQYLQMVVNKTGALFRMMIRMLGVVLNLEERNVKMLSLFTEKVGAV 346 Query: 205 FQLVDDVLDYRG-EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS 263 FQ+ DD+++ + GK GED GK T+ I A T+ +K + Sbjct: 347 FQIQDDIINLDSPDYTTKGKR-GEDITEGKITVIAIHALNNNTEDKKQRLFEILCMKTQD 405 Query: 264 VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-RCLPDSSWKKSLMEVVDFCLQR 320 + +A IM+++ ++ + A ++A L + LP+S K L + F L+R Sbjct: 406 QTLVDEAIEIMQQSGSIQYAKELASQIMEQAWQELDKSLPESESKYKLKLICQFILKR 463 >gi|70992035|ref|XP_750866.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293] gi|66848499|gb|EAL88828.1| geranylgeranyl diphosphate synthase, putative [Aspergillus fumigatus Af293] Length = 787 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 3/171 (1%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 ++ +H A+L+ DD+ D+S RRG+ A ++G+ ++ +F+ QA + + ++ + Sbjct: 527 VDLLHNASLILDDIEDNSPKRRGRPATHTIFGHSQAINSANFMFVQAVQVARQFRNPNVV 586 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + L L G+ L L + +YL+++ +KT L + + A + + Sbjct: 587 DILLEELENLHLGQSWDLDWKYKLRCPSPSEYLNMVDNKTGG--LFRLLLRLMQAEKKGT 644 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L + G FQ+ DD ++ R + K ED GK + P+++ Sbjct: 645 TEVDLDRLTVLFGRFFQIRDDYMNLRSGLYTEQKGFCEDLDEGKFSYPIVV 695 >gi|159124434|gb|EDP49552.1| geranylgeranyl diphosphate synthase, putative [Aspergillus fumigatus A1163] Length = 787 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 3/171 (1%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 ++ +H A+L+ DD+ D+S RRG+ A ++G+ ++ +F+ QA + + ++ + Sbjct: 527 VDLLHNASLILDDIEDNSPKRRGRPATHTIFGHSQAINSANFMFVQAVQVARQFRNPNVV 586 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + L L G+ L L + +YL+++ +KT L + + A + + Sbjct: 587 DILLEELENLHLGQSWDLDWKYKLRCPSPSEYLNMVDNKTGG--LFRLLLRLMQAEKKGT 644 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L + G FQ+ DD ++ R + K ED GK + P+++ Sbjct: 645 TEVDLDRLTVLFGRFFQIRDDYMNLRSGLYTEQKGFCEDLDEGKFSYPIVV 695 >gi|29840764|ref|NP_829870.1| geranyltranstransferase [Chlamydophila caviae GPIC] gi|29835114|gb|AAP05748.1| geranyltranstransferase [Chlamydophila caviae GPIC] Length = 293 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 20/209 (9%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSAL-- 90 V+Y + SGGKR+RPML A L+ D VL A AIEFIHT+TL+ DD+ Sbjct: 36 VEYALTSGGKRIRPMLVCMIAKGLDMSRD--VLDAALAIEFIHTSTLIADDLPCMDDDDE 93 Query: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEA-LEALSLVACTLAEGEL 145 RRG+ + +++L L+ A+ + + KSQ + + + +++ Sbjct: 94 RRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLKSQGVDPKEVDIAYDIISDVTD 153 Query: 146 RQLSLSKNLDVTEEDYL----------HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + ++ L ED +I KT LF A L G + Sbjct: 154 KNFGVNGVLGGQYEDMFFKNDGPEYVQSIINKKTGALFEIACVSGWLFGGGDPLCVPQII 213 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + G+ FQ+ DD+LD + ++G N Sbjct: 214 EFSQTFGLLFQMKDDILDIHQDGQDVGLN 242 >gi|239943138|ref|ZP_04695075.1| polyprenyl synthetase [Streptomyces roseosporus NRRL 15998] gi|239989596|ref|ZP_04710260.1| polyprenyl synthetase [Streptomyces roseosporus NRRL 11379] Length = 363 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 73/310 (23%), Positives = 127/310 (40%), Gaps = 53/310 (17%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV-LLACAIEFIHTATLLHDDVVDDSAL 90 D+++ L GGKR R A ++ + A +IE + T L+HDD++DD+ Sbjct: 52 DLLEDLSLRGGKRQRVAFMYEAARLVTSEPVPGIDEAALSIELLQTHLLVHDDIIDDAPT 111 Query: 91 RRGKVAARLVWGNQTS------------------------VLVGDFLLSQAFCMVIETKS 126 RRG + + + +L D LS +V ++ Sbjct: 112 RRGGTSTYYSYKEEFPEQPQTALGLALLAGDLAAFLSLRVLLEADLPLSLRQALV---ET 168 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 Q A + V G++ L ++L + E+ LH + A SA + + Sbjct: 169 QVTAGAATFV------GQM--YDLERDLPALPTEEMLHEVSDYKASRSSALAPIQLGLLA 220 Query: 186 VQNSVRQ---ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV--IL 240 V+Q L+ Y + GI+ Q+ DD L G+ GK D R+G+ T + IL Sbjct: 221 AGEDVKQFDATLRRYALMFGISGQMCDDYLSLFGDEKVTGKPATADVRDGRRTYAIRAIL 280 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA--YSYGQKAKDSL 298 A ++RE+ +S + S +++ I R R VD + R+ + Y ++A Sbjct: 281 AAADASERERV--ESILGRQDASADDIDTIREIAR--RHGVDQQLRSQMHRYAEEA---- 332 Query: 299 RCLPDSSWKK 308 C+ +SW+ Sbjct: 333 -CVEAASWRP 341 >gi|296387401|ref|ZP_06876900.1| geranyltranstransferase [Pseudomonas aeruginosa PAb1] Length = 207 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 15/173 (8%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DD 83 +++ + + ++Y + +GGKR+RP+L A L ACA+E IH +L+H Sbjct: 27 ELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLP 86 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQE---ALEALSLVA- 137 +DD LRRG+ + T++L D L + AF ++ +T+ QE LE L+ +A Sbjct: 87 AMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLAR 146 Query: 138 ----CTLAEGELRQL-SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + G+ L S+ LD + +H + KT L A++ + +L +G Sbjct: 147 AAGSAGMVGGQAIDLGSVGVALDQAALEVMH--RHKTGALIEASVRLGALASG 197 >gi|332671664|ref|YP_004454672.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484] gi|332340702|gb|AEE47285.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484] Length = 367 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 27/229 (11%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVL-LACAIEFIHTATLLHDDVVDDSALRRGKV---- 95 GGK +RP LT A L L V +A A E +H A L+HDDV+D +RRG++ Sbjct: 64 GGKLMRPRLTAAAYLGLGGTDLGAVAPVAAAQEVLHVAMLVHDDVLDHDDVRRGRLNVSG 123 Query: 96 AAR---LVWGNQT----------SVLVGDFLLSQAFCMVIETK-----SQEALEALSLVA 137 AAR L G +L GD L+ AF +V T + + L+ Sbjct: 124 AARRRGLTRGLPAVDADAQALAAGILAGDLALASAFRLVARTPVPGDVRERLTDLLADGV 183 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS--LIAGVQNSVRQALK 195 T GEL ++ S+ L + D L V KTA +S + ++S ++AG V + L Sbjct: 184 ETAVAGELLDVA-SETLAPADVDALLVAALKTAE-YSCRVPLASGAVLAGADEDVLRRLD 241 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG+AFQL DD L G+ GK++ D R GK T + +A+ R Sbjct: 242 DVAAALGLAFQLTDDDLGVFGDPAVTGKSVLSDLRRGKRTELLRVAYDR 290 >gi|62959235|gb|AAY23725.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-475] Length = 147 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 10/134 (7%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQL 148 LR GK V+ T+VL GD L + AF ++ + + S + TL + + Sbjct: 12 LRHGKPTVHKVYDEATAVLAGDALHALAFEILADPGTCSDPFVRSELITTLGTASGMNGM 71 Query: 149 SLSKNLDVTEEDY-----LHVI----KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + +D+ ++ LH I + KT L +A++E+ +++ V R L++Y Sbjct: 72 AGGQMMDMVADEEGVEYDLHTITRLQQLKTGALLAASVEMGAILGRVPPEGRAHLRAYAR 131 Query: 200 NLGIAFQLVDDVLD 213 ++G+AFQ+ DD+LD Sbjct: 132 DIGLAFQIADDILD 145 >gi|291446614|ref|ZP_06586004.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291349561|gb|EFE76465.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 359 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 73/310 (23%), Positives = 127/310 (40%), Gaps = 53/310 (17%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV-LLACAIEFIHTATLLHDDVVDDSAL 90 D+++ L GGKR R A ++ + A +IE + T L+HDD++DD+ Sbjct: 48 DLLEDLSLRGGKRQRVAFMYEAARLVTSEPVPGIDEAALSIELLQTHLLVHDDIIDDAPT 107 Query: 91 RRGKVAARLVWGNQTS------------------------VLVGDFLLSQAFCMVIETKS 126 RRG + + + +L D LS +V ++ Sbjct: 108 RRGGTSTYYSYKEEFPEQPQTALGLALLAGDLAAFLSLRVLLEADLPLSLRQALV---ET 164 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 Q A + V G++ L ++L + E+ LH + A SA + + Sbjct: 165 QVTAGAATFV------GQM--YDLERDLPALPTEEMLHEVSDYKASRSSALAPIQLGLLA 216 Query: 186 VQNSVRQ---ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV--IL 240 V+Q L+ Y + GI+ Q+ DD L G+ GK D R+G+ T + IL Sbjct: 217 AGEDVKQFDATLRRYALMFGISGQMCDDYLSLFGDEKVTGKPATADVRDGRRTYAIRAIL 276 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA--YSYGQKAKDSL 298 A ++RE+ +S + S +++ I R R VD + R+ + Y ++A Sbjct: 277 AAADASERERV--ESILGRQDASADDIDTIREIAR--RHGVDQQLRSQMHRYAEEA---- 328 Query: 299 RCLPDSSWKK 308 C+ +SW+ Sbjct: 329 -CVEAASWRP 337 >gi|297591959|ref|NP_001172060.1| farnesyl pyrophosphate synthase [Sus scrofa] gi|262072800|dbj|BAI47708.1| farnesyl diphosphate synthase [Sus scrofa] Length = 421 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 19/237 (8%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IE + L+ DD+ D S RRG+ G + FLL +++ +E Sbjct: 160 IELLQAFFLVADDIEDSSLTRRGQTCWYRKPGIGLDAINDAFLLEACIYRLLKFYCREQP 219 Query: 131 EALSLVACTLAEG---ELRQL-----SLSKNLDV---TEEDYLHVIKSKTAVLFSAALEV 179 L+L+ L E+ Q N+D+ TE+ Y ++K KTA +S L V Sbjct: 220 YYLNLIELFLQTSYNTEIGQTLDLIAGPQGNVDLSRFTEKRYKSIVKYKTA-FYSFYLPV 278 Query: 180 SS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++ +AG+ A K M +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 279 AAAMYMAGIDGEKEHANAKKILMEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCSW 337 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSYGQ 292 V+ QR + ++ + N G+ E + + + E N V +Y SY Sbjct: 338 LVVQCLQRASPEQRQILQE--NYGQKDAEKVARVKALYEEMNLQAVFLQYEEDSYSH 392 >gi|197724595|emb|CAP07654.1| geranylgeranyldiphosphate synthase [Sphaceloma manihoticola] Length = 307 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 4/174 (2%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 ++ +H ++L+ DD D S LRRG+ AA ++G ++ + +A + E+ E+ Sbjct: 54 LQLLHNSSLILDDFQDRSPLRRGRPAAHALFGEAQAINSSSYGFIKAVALAQESFDLEST 113 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 +A++ EG+ +L + ++YL ++ + L A ++ G Sbjct: 114 KAVTTAMLRSFEGQAAELHWTHTKTCPSVQEYLEMVNFSS--LLHLAPQLMQAKRGSATP 171 Query: 190 VRQ-ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 V Q ++ S LG +Q+ DD ++ E K ED GK +LP+I A Sbjct: 172 VDQRSMVSLMRLLGQFYQIRDDYMNLTSAHYEKDKGFCEDLDEGKYSLPLIHAL 225 >gi|62185577|ref|YP_220362.1| geranylgeranyl pyrophosphate synthase [Chlamydophila abortus S26/3] gi|62148644|emb|CAH64417.1| geranylgeranyl pyrophosphate synthase [Chlamydophila abortus S26/3] Length = 293 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 24/211 (11%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--R 91 V+Y + SGGKR+RPML A L G + + A AIEFIHT+TL+ DD+ R Sbjct: 36 VEYALTSGGKRIRPMLVCMMAKGLG-MGRDVLDSALAIEFIHTSTLIADDLPCMDDDDER 94 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMV---------IETKSQEALEALSLVA----- 137 RG+ + +++L L+ A+ + + S+E A +++ Sbjct: 95 RGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLKSLGVDSKEVDCAYDIISDITDK 154 Query: 138 ----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + G+ + + + E +I KT LF A L G Sbjct: 155 NFGVHGVLGGQYEDMFFTNH---GPEHVQSIINKKTGALFEIACVSGWLFGGGTPQCVPQ 211 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + + G+ FQ+ DD+LD + ++G N Sbjct: 212 VLEFSQTFGLLFQIKDDILDIHQDDQDVGLN 242 >gi|296205499|ref|XP_002749779.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix jacchus] Length = 406 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 22/222 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 145 VELLQAFFLVTDDIMDSSLTRRGQICWYQKPGVGLDAINDAVLLEACVYRLLKLYCREQP 204 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVLFSAAL 177 L+L+ L Q + + LD+ TE+ Y ++K KTA +S L Sbjct: 205 YYLNLIELFLQSS--YQTEIGQTLDLITAPQDNVDLDRFTEKRYKSIVKYKTA-FYSFYL 261 Query: 178 EVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 V++ +AG+ A K + +G FQ+ DD LD G+ + GK +G D ++ K Sbjct: 262 PVAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-VGTDIQDNKC 320 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + V+ QR T ++ K N G+ E + + + E Sbjct: 321 SWLVVQCLQRSTPEQRQILKE--NYGQKETEKVARVKALYEE 360 >gi|90080788|dbj|BAE89875.1| unnamed protein product [Macaca fascicularis] Length = 105 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 34/55 (61%) Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 V + YG N+GIAFQL+DDVLD+ ++MGK D + G T PV+ A Q+ Sbjct: 23 VHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQ 77 >gi|125810640|ref|XP_001361556.1| GA11601 [Drosophila pseudoobscura pseudoobscura] gi|195153687|ref|XP_002017755.1| GL17346 [Drosophila persimilis] gi|54636732|gb|EAL26135.1| GA11601 [Drosophila pseudoobscura pseudoobscura] gi|194113551|gb|EDW35594.1| GL17346 [Drosophila persimilis] Length = 419 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 14/217 (6%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 L +E + + ++ DDV+D+S RRG+ V + + ++ A +++ Sbjct: 157 LGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAILKMHF 216 Query: 127 QE-----ALEAL--SLVACTLAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVL-FSAAL 177 AL L + T L QL+ +++ + T E+Y ++ +KTA F Sbjct: 217 SHLDCYVALMELFHEITYITTCGQSLDQLNSHRSVSEFTMENYKAIVDNKTAYYSFYLPF 276 Query: 178 EVSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 V+ +AG ++ + RQ+ K+ + +G FQ+ DD LD G GK IG D ++ K + Sbjct: 277 AVALHLAGYKDAEAFRQS-KTILLEMGHFFQVQDDFLDCFGNPEVTGK-IGTDIQDNKCS 334 Query: 236 LPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAF 271 ++A QR +K N+ + VE +K+ + Sbjct: 335 WLAVVAMQRANAEQKKIMVDCYGNNDPVKVERVKELY 371 >gi|294658024|ref|XP_460338.2| DEHA2E23870p [Debaryomyces hansenii CBS767] gi|199433130|emb|CAG88623.2| DEHA2E23870p [Debaryomyces hansenii] Length = 346 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 29/217 (13%) Query: 57 LEYRGDNHVLL---ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113 L Y+ ++H LL I H ++LL DD+ DDS+ RRG A ++G ++ G+ + Sbjct: 51 LYYQIEDHKLLDKIGEIISIFHNSSLLIDDIEDDSSFRRGLPTAHTLYGTPLTINCGNLM 110 Query: 114 L------SQAFCMVIETKSQEA---LEALSLVACTLAEGELRQLSLSKNLDVTEED---- 160 +Q + K + +++L+ + E+ L + LD+ D Sbjct: 111 YFIALQKAQNELPMYYNKIHDGDVDVKSLTYQISQILVDEMLNLHHGQGLDIYWRDSGDY 170 Query: 161 ----------YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 YL ++ +KT LF ++++ + + S ++ LGI +Q+ DD Sbjct: 171 IQNHLPEIDEYLKMVMNKTGGLFRLSVKLLEVFSPTFKST--SVIPLANLLGIIYQIRDD 228 Query: 211 VLD-YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 L+ + M GED GK +LP++ + G+ Sbjct: 229 YLNLVDPNYSHMKGYTGEDLIEGKLSLPILHCLRTGS 265 >gi|270602136|ref|ZP_06221589.1| geranyltranstransferase [Haemophilus influenzae HK1212] gi|270318209|gb|EFA29415.1| geranyltranstransferase [Haemophilus influenzae HK1212] Length = 105 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 42/71 (59%) Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 ++ Q+L Y +G+AFQ+ DD+LD G+ E+GK +G D K T P +L ++ Sbjct: 12 TLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQK 71 Query: 249 EKNFWKSTIND 259 ++ ++S +++ Sbjct: 72 AQDLYQSALSE 82 >gi|115675636|ref|XP_781061.2| PREDICTED: similar to geranylgeranyl diphosphate synthase1 [Strongylocentrotus purpuratus] gi|115959556|ref|XP_001186881.1| PREDICTED: similar to geranylgeranyl diphosphate synthase1 [Strongylocentrotus purpuratus] Length = 427 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 6/175 (3%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +L+ IE +H + + DD+ D S LRRG A ++G ++ +++ V++ Sbjct: 79 ILSTYIEVLHYSYRI-DDIEDSSKLRRGIPVAHSIYGIAQTINSANYMYFLGLKEVMQFD 137 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIA 184 +A++ + L +G+ + + TEE+Y ++ KT LF A+ + L + Sbjct: 138 HPDAMKIFTEQLVLLHQGQGMDIYWRDSYTCPTEEEYKEMVIKKTGGLFGLAVRLMQLFS 197 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++ K LG+ FQ+ DD + + K+ ED GK + P+I Sbjct: 198 ANKSD----FKPLSDILGLYFQIRDDYANLCSKQYTENKSYCEDLTEGKFSFPLI 248 >gi|322695231|gb|EFY87043.1| geranylgeranyl diphosphate synthase [Metarhizium acridum CQMa 102] Length = 325 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 5/159 (3%) Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DD+ D S LRRG A ++G ++ + A + + + A + L Sbjct: 91 DDIQDSSKLRRGVPVAHSIFGIAQTINSANLAYFMAQKELDQLTNPRAYAIFTEELVNLH 150 Query: 142 EGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 G+ +L +L TE++Y+ +I++KT LF A+ L+ G +S R L Sbjct: 151 RGQGMELHWRDSLHCPTEDEYMRMIQNKTGGLFRLAIR---LMQGESSSKRDYLPLV-ET 206 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 LG FQ+ DD + + +V K ED GK + P+I Sbjct: 207 LGTLFQIRDDYQNLQSDVYSKNKGYCEDISEGKFSYPII 245 >gi|163847875|ref|YP_001635919.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl] gi|222525750|ref|YP_002570221.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl] gi|163669164|gb|ABY35530.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl] gi|222449629|gb|ACM53895.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl] Length = 305 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 1/208 (0%) Query: 10 KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 D+ +V ++ +R+ + +I V +++ RLR ++ LA A + Y V A Sbjct: 11 HDLLRVEQILQERMRARYSVIAMVNPHVVTDATDRLRALVVLAVARLGNYTDAQVVHAAA 70 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+E I AT HD ++D+ A R G+ A W + +++GD+L + A + + Sbjct: 71 AVELIEAATRAHDTLIDEHARRTGR-GANGSWDHGVVLMIGDYLFALAAGEMARSPDPRI 129 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + S + EG+L ++ + Y ++ + L +AA + L + ++ Sbjct: 130 ISLYSQAVMQVCEGQLITITSLTPPETALATYWQRTEALSGALLAAAAQAGILCGNLPDT 189 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + + +GM+LG+A +L ++ D E Sbjct: 190 LLEPAARFGMHLGLARRLATEIRDLEAE 217 >gi|119493680|ref|XP_001263940.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] gi|119412101|gb|EAW22043.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] Length = 294 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 5/173 (2%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 + +H+A+LL DD+ D S LRRG A ++G ++ +F A + + EAL Sbjct: 105 VGLLHSASLLIDDIQDSSKLRRGFPVAHSIFGVAQTINSANFAYFFAQQELQKLGKPEAL 164 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 + L G+ L +L TEE+YL ++ +KT LF A+++ + + QN+ Sbjct: 165 VIFTEEMLRLHRGQGMDLYWRDSLICPTEEEYLEMVANKTGGLFRLAIKLMQMES--QNT 222 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + + + LGI FQ+ DD + + ++ K GE P AF Sbjct: 223 -KDCVPLVDL-LGIIFQIRDDYQNLQSDLYAKNKGFGETSLKANSPTPSSTAF 273 >gi|157834060|pdb|1UBX|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase Length = 367 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 25/251 (9%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHV-LLACA------IEFIHTATLLHDDVVDDSALRR 92 GGK R + +A L G L CA IE A+L+ DD++D S RR Sbjct: 68 PGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELFQAASLVADDIMDQSLTRR 127 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAEGELRQL- 148 G++ G + FLL + V++ ++ + L L T + EL Q+ Sbjct: 128 GQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVHLLELFLQTAYQTELGQML 187 Query: 149 ----SLSKNLDV---TEEDYLHVIKSKTAVLFSAALEVSSLIAGV---QNSVRQALKSYG 198 + +D+ +EE Y ++K KTA +S L V++ + V + K+ Sbjct: 188 DLITAPVSKVDLSHFSEERYKAIVKYKTA-FYSFYLPVAAAMYMVGIDSKEEHENAKAIL 246 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + +G FQ+ DD LD G+ GK +G D ++ K + V+ QR T ++ + N Sbjct: 247 LEMGEYFQIQDDYLDCFGDPALTGK-VGTDIQDNKCSWLVVQCLQRVTPEQRQLLED--N 303 Query: 259 DGKISVENLKK 269 G+ E + K Sbjct: 304 YGRKEPEKVAK 314 >gi|58699102|ref|ZP_00373935.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534385|gb|EAL58551.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila ananassae] Length = 120 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 5/70 (7%) Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE-----VNEMG 222 KTA LF+A+ E+ ++I G + R+AL ++G+NLG+ FQ DD+ DY + ++ +G Sbjct: 21 KTAKLFAASCEIGAIIGGATDEQRRALYNFGINLGLIFQAKDDIEDYEQDKTNNLMSVLG 80 Query: 223 KNIGEDFRNG 232 K+ ED+ +G Sbjct: 81 KSEVEDYIDG 90 >gi|217077572|ref|YP_002335290.1| geranylgeranyl diphosphate synthase [Thermosipho africanus TCF52B] gi|217037427|gb|ACJ75949.1| geranylgeranyl diphosphate synthase [Thermosipho africanus TCF52B] Length = 338 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 26/246 (10%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLI---FSGGKRLRPMLTLATALML---EYRGDNHVL 66 E + +IL+ + + I +++ LI GKR+RP+L L A E + Sbjct: 16 EYIEKVILENKVNPPKQIESLIRTLIEYCLRPGKRIRPLLFLLGATSYAKKELDYEKLYR 75 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW-------------GNQTSVLVGDFL 113 +A IE +H L+HDD++D SALRRG + +V+ G +++ GD L Sbjct: 76 IAAVIEIMHCFLLIHDDIMDRSALRRGLPSLHVVFYEEFKEKNNNEKIGEDLALVFGDIL 135 Query: 114 LSQAFCMVIETK-SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV--IKSKTA 170 A + + S + LE S G+ + S +ED + V + KTA Sbjct: 136 FFIAIRQLSKLNLSSKFLEEFSNCYINTGYGQTLDVLYSLGKYKPDEDKISVEIARLKTA 195 Query: 171 VL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 F + L++ +N ++ ++ + GIAFQ+ DD++ E + GK+ D Sbjct: 196 YYTFFYPFYLGVLLSN-ENIDKKKIEDAIIPAGIAFQIRDDIISTFDE--KSGKSNVTDI 252 Query: 230 RNGKPT 235 GK T Sbjct: 253 LEGKLT 258 >gi|126310793|ref|XP_001378652.1| PREDICTED: similar to subunit 2 of solanesyl diphosphate synthase [Monodelphis domestica] Length = 390 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 32/263 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ S L + + +GN+ ++L GDFLL+ A + + + Sbjct: 138 LAEITELIHTAFLVHRGIVNLSELNSSDGPLKDMRFGNKIAILSGDFLLASACTGLAQLQ 197 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY------LHVIKSKTAVL---FSAA 176 + + +E +S L +G + S S + +D + S +A+L AA Sbjct: 198 NTKVVELVSSALIDLVQGIYCENSTSAEENCITDDIGISTWKEQIFLSHSALLAKSCQAA 257 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY-RGEVNEMGKNIGEDFRNGKPT 235 +E++ VQ+ Q YG ++ ++ ++ D+ + RG+ N +I + + Sbjct: 258 MELAKHDTEVQDMAFQ----YGKHMSMSHKINSDLQPFIRGKCN---GSIAFNLNSA--- 307 Query: 236 LPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 PV+L Q RE W I + G ++ L++A + + + +D +G Sbjct: 308 -PVVL-HQEFLGRET--WIKQIREAQEKGTLNYSKLQEAILAGKGVTSAIDL---CRYHG 360 Query: 292 QKAKDSLRCLPDSSWKKSLMEVV 314 KA ++L C P S + +L +V Sbjct: 361 NKALEALECFPPSEARSALENIV 383 >gi|14624998|dbj|BAB61879.1| farnesyl diphosphate synthase [Rhodobacter blasticus] Length = 138 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 14/141 (9%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 HDD+ +D+ LRRG + W T+VL GD L + AF ++ + + A + LV Sbjct: 1 HDDMPCMDNDDLRRGLPTVHVKWDEATAVLAGDALQTLAFELLCDPVAGPAEVRIGLVQA 60 Query: 139 TLAEGELRQLSLSKNLDVTEE--------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNS 189 + L + LD+ E D + +++ KT L + E +++A + Sbjct: 61 LAQASGAEGMVLGQALDIAAETAGRPLTLDEITALQAGKTGALIRFSAEAGAILA---QA 117 Query: 190 VRQALKSYGMNLGIAFQLVDD 210 R L++Y LG+AFQ+ DD Sbjct: 118 DRAPLRTYATALGLAFQIADD 138 >gi|298709043|emb|CBJ30993.1| Geranylgeranyl pyrophosphate synthetase, chloroplast precursor [Ectocarpus siliculosus] Length = 142 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 42/169 (24%) Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 DV E+ + + KT L A +L+ G + + ++ + ++G+AFQ+ DD+LD Sbjct: 15 DVGLEELRWIHRHKTGALLKVACTAGALLGGASDKDVKNMEVFSESIGLAFQVADDILDC 74 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274 ++GK G+D K T P ++ G K+E Sbjct: 75 TATSEQLGKTAGKDEAVNKTTYPKLMGMD-GAKKEA------------------------ 109 Query: 275 RENRALVDTEYRAY-SYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 R LVD ++A YG+KA + L+ + D+ ++R N Sbjct: 110 ---RRLVDEAHKALEPYGEKA-------------RPLLAIADYIIERKN 142 >gi|238603525|ref|XP_002395972.1| hypothetical protein MPER_03878 [Moniliophthora perniciosa FA553] gi|215467625|gb|EEB96902.1| hypothetical protein MPER_03878 [Moniliophthora perniciosa FA553] Length = 232 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 2/90 (2%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 V+++ GGK R + LA L + L AIE +HT +L+ DD+ D+S RRG Sbjct: 143 VRHITERGGKSWRSYIVLACLSALGKDPEPFKPLLAAIELLHTGSLVIDDIQDESPTRRG 202 Query: 94 KVAARLVWGNQTSVLVGD--FLLSQAFCMV 121 A VWG T++ G +L S C++ Sbjct: 203 VTAVHHVWGVPTAINAGTAAYLRSSRPCVL 232 >gi|317506405|ref|ZP_07964210.1| hypothetical protein HMPREF9336_00580 [Segniliparus rugosus ATCC BAA-974] gi|316255285|gb|EFV14550.1| hypothetical protein HMPREF9336_00580 [Segniliparus rugosus ATCC BAA-974] Length = 221 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 16/185 (8%) Query: 18 LILKRICSDVEMIPDVVKYLI---FS----------GGKRLRPMLTLATALMLEYRGDNH 64 L+ +C + P V+ +I F GGK +R L + L Sbjct: 34 LVFPAVCEAIAETPSHVRRVIEYHFGWDAGVAPIRYGGKAVRAALATLSCEALGGAAALA 93 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 V A +E +H A+LLHDD++D RRG+ AA V+G ++L GD L A Sbjct: 94 VDAAVCVELLHNASLLHDDIIDGDRQRRGRPAAWTVFGVPAAMLAGDALFFLAMGRAAAM 153 Query: 125 KSQEALEALSLVACTLA---EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +S A +++ V + EGE + L T + + SKT L + A + Sbjct: 154 QSGTACDSVGKVIDSFTEVIEGEYLDILLEGRSGATVSEVEAMAASKTGALIALACVLGG 213 Query: 182 LIAGV 186 AGV Sbjct: 214 SAAGV 218 >gi|255075269|ref|XP_002501309.1| farnesyl-pyrophosphate synthetase [Micromonas sp. RCC299] gi|226516573|gb|ACO62567.1| farnesyl-pyrophosphate synthetase [Micromonas sp. RCC299] Length = 342 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 24/222 (10%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV-----GDFLLSQAFC 119 +++ IE++ A L+ DD++D+S RRG+ W V + G L Q + Sbjct: 76 MVVGWCIEWLQAAFLVWDDIMDESVTRRGQPC----WFRNPKVEMVAINDGLVLECQIYS 131 Query: 120 MV-----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-----TEEDYLHVIKSKT 169 M+ E LE + A G+L L + +V TEE Y+ ++ KT Sbjct: 132 MLKKHCKAHAGYAELLEMFHEITYKTASGQLLDLITAPIGEVDLSKYTEEAYMRIVTYKT 191 Query: 170 AVL-FSAALEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 A F + ++GV + A LG FQ+ DD LD G+ +GK IG Sbjct: 192 AYYTFYLPAAAAMHLSGVTDPAAFAKANEICEKLGQFFQIQDDYLDCYGDPAVIGK-IGT 250 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D ++ K V+ A +R + ++ + N GK E KK Sbjct: 251 DIQDNKCGWLVVQALKRCSAEQRKIIEE--NYGKKDAECEKK 290 >gi|150865549|ref|XP_001384814.2| geranylgeranyl diphosphate synthase [Scheffersomyces stipitis CBS 6054] gi|149386805|gb|ABN66785.2| geranylgeranyl diphosphate synthase [Scheffersomyces stipitis CBS 6054] Length = 347 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 28/198 (14%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--------- 121 I H A+LL DD+ D S RRG AA +G ++ G+ + A Sbjct: 71 ISIFHNASLLIDDIEDSSEYRRGFPAAHTKYGIPLTINCGNLMYFVALQKAQITLPRLYS 130 Query: 122 -IETKSQEALEALSLVACTLAEGELRQLSLSKNLDV--------TEE------DYLHVIK 166 + + + ++ L + E+ L + LD+ T+E DYL ++K Sbjct: 131 DLNSDLEIDIDKLKFETSQILIDEMLNLHHGQGLDIYWRDYLPETQESLPSVQDYLSMVK 190 Query: 167 SKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY-RGEVNEMGKNI 225 KT LF ++++ +L + + + L LGI +Q+ DD L+ + + M + Sbjct: 191 DKTGGLFRLSIKLLALFSKRETT---DLIPIANLLGIIYQVRDDYLNLTSSKYSHMKGVV 247 Query: 226 GEDFRNGKPTLPVILAFQ 243 GED GK +LP++ Q Sbjct: 248 GEDLVEGKLSLPILHCLQ 265 >gi|73962111|ref|XP_547662.2| PREDICTED: similar to Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Canis familiaris] Length = 262 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 40/266 (15%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLAT-ALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 ++ P +VK L G L +A +LEY + + +E + L+ DD++ Sbjct: 18 IQHFPQIVKMLTEDGMGHLEMGDAIAQLKEVLEYNAVGALTVGWCMELLQAFFLVSDDIM 77 Query: 86 DDSALRRGKVAARLVWGNQTSV---LVGDFLLSQA--FCMVIETKSQEALEALSLVACTL 140 D S ++G++ W + + + D LL +A +C+ ++ QE L L+ L Sbjct: 78 DSSLTQQGQIC----WYQKPGIGLDAINDALLLEACIYCL-LKVYCQEQPYYLDLIELFL 132 Query: 141 AEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 Q + + LD+ TE+ Y ++K K A +S L ++ A Sbjct: 133 QSS--YQTEIGQTLDLITSPQGSVDLSRFTEKRYKSIVKCKMA-FYSLYLPMA---AKEH 186 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + ++ L +N+G FQ+ DD LD G+ + GK IG D ++ K + V+ Q+ + Sbjct: 187 ANAKKIL----LNMGEFFQIQDDFLDLFGDPSVTGK-IGTDIQDNKCSWLVVQCLQQASP 241 Query: 248 REKNFWKSTINDGKISVENLKKAFII 273 E WK N G+ E + + ++ Sbjct: 242 EE---WKE--NYGQKEPEKVARVKVL 262 >gi|225462001|ref|XP_002272641.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296089967|emb|CBI39786.3| unnamed protein product [Vitis vinifera] Length = 341 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 125/280 (44%), Gaps = 42/280 (15%) Query: 40 SGGKRLRPMLTLATALMLEYR--GDNHVLLAC----AIEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + +L+ R D+ V LAC IE++ L+ DD++D+S RRG Sbjct: 44 PGGKLNRGLSVVDSYKLLQGRQLTDDEVFLACVLGWCIEWLQAYFLVLDDIMDNSHTRRG 103 Query: 94 K-----------VAAR--LVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEAL-EALS 134 + +AA ++ NQ ++ + + + + + E + Q A + + Sbjct: 104 QPCWFRVPKVGMIAANDGVILRNQIPRILKNHFKGKPYYVDLLDLFNEVEFQTASGQMID 163 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLH--VIKSKTAVL-FSAALEVSSLIAGVQNSVR 191 L+ E +L + SL LH +++ KTA F + + L+AG Sbjct: 164 LITTIEGEKDLSKYSLP----------LHRRIVQYKTAYYSFYLPVACALLMAGENLDNH 213 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 ++K + +GI FQ+ DD LD G+ +GK IG D + K + V+ A + + +K Sbjct: 214 TSVKDILVQMGIYFQVQDDYLDCFGDPQVIGK-IGTDIEDFKCSWLVVKALEICNEEQKK 272 Query: 252 FWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSY 290 N GK N+ K + ++ + V EY + SY Sbjct: 273 TLYG--NYGKADPANVAKVKALYKDLDLQGVFLEYESKSY 310 >gi|62199628|gb|AAX76910.1| farnesyl diphosphate synthase [Vitis vinifera] Length = 341 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 42/280 (15%) Query: 40 SGGKRLRPMLTLATALMLEYR--GDNHVLLAC----AIEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + +L+ R D+ V LAC IE++ L+ DD++D+S RRG Sbjct: 44 PGGKLNRGLSVVDSYKLLQGRQLTDDEVFLACVLGLCIEWLQAYFLVLDDIMDNSHTRRG 103 Query: 94 K-----------VAAR--LVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEAL-EALS 134 + +AA ++ NQ ++ + + + + + E + Q A + + Sbjct: 104 QPCWFRVPKVGMIAANDGVILRNQIPRILKNHFKGKPYYVDLLDLFNEVEFQTASGQMID 163 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLH--VIKSKTAVL-FSAALEVSSLIAGVQNSVR 191 L+ E +L + SL LH +++ KTA F + + L+AG Sbjct: 164 LITTIEGEKDLSKYSLP----------LHRRIVQYKTAYYSFHLPVACALLMAGENLDNH 213 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 ++K + +GI FQ+ DD LD G+ +GK IG D + K + ++ A + + +K Sbjct: 214 TSVKDILVQMGIYFQVQDDYLDCFGDPQVIGK-IGTDIEDFKCSWLIVKALEICNEEQKK 272 Query: 252 FWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSY 290 N GK N+ K + ++ + V EY + SY Sbjct: 273 TLYG--NYGKADPANVAKVKALYKDLDLQGVFLEYESKSY 310 >gi|316954848|gb|EFV46383.1| decaprenyl-diphosphate synthase subunit 1 [Trichinella spiralis] Length = 146 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 1/103 (0%) Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 L +GEL Q+ + +YL KT LFS +L+ ++++A + + +G Sbjct: 37 LVKGELIQMESGSDESRLFSEYLTKCYKKTGSLFSNSLKAAAVLANCSELCVKNVYQFGR 96 Query: 200 NLGIAFQLVDDVLDYRG-EVNEMGKNIGEDFRNGKPTLPVILA 241 N G+ FQLVDD+LD+ + +GK D + G T PV+ A Sbjct: 97 NFGLMFQLVDDLLDFCSVDSTTLGKPSRVDLQLGIVTAPVLFA 139 >gi|302697469|ref|XP_003038413.1| hypothetical protein SCHCODRAFT_35228 [Schizophyllum commune H4-8] gi|300112110|gb|EFJ03511.1| hypothetical protein SCHCODRAFT_35228 [Schizophyllum commune H4-8] Length = 228 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 28/248 (11%) Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 V LA I IHTA++LH+ V G AA GN+ ++L GDFLL +A + Sbjct: 5 TQVRLAQIIAMIHTASVLHEGVA------AGSEAAH---GNKLAILGGDFLLGRASSALA 55 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + EA+E ++ EG + +++ S + Y+ + A L + + + Sbjct: 56 ALGAAEAVELIAAAIANTVEGTVMRVATSSPAEAW-ASYVRRVYLGGASLMAKGARAAVV 114 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + G + + ++ N+GIA Q+++DV ++ E G G D T P++ A+ Sbjct: 115 LGGCRGQLPDVAYAFARNMGIAQQIMEDVREW-----EAG---GSDV-----TAPLLCAW 161 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + K + + G +L A + E A+ Y +A++ L LP Sbjct: 162 KVNPKM-----GALVQRGLADEADLDMARDYVEEYDGRDRARDVAHDYAAQAREVLAALP 216 Query: 303 DSSWKKSL 310 +S + +L Sbjct: 217 ESGARTAL 224 >gi|123469801|ref|XP_001318110.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3] gi|121900861|gb|EAY05887.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3] Length = 338 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 17/235 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNH-----VLLACAIEFIHTATLLHDDVV 85 D+V Y I +GGK LR +L++ L L Y D+ L E + + L+ DD++ Sbjct: 37 DLVDYTI-AGGKCLRGLLSVFGFLELTGYSPDSKEAEAAYALGWVQEILQASFLVADDLM 95 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEALSLVACTL 140 D S LRR K + N+ + + + L M+I+ + LE L+ T Sbjct: 96 DKSPLRRDKPCWYCLQENKYTAVSDSYFLENVLYMIIDKYFADFPVEVVLEIKHLLHITT 155 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG--VQNSVRQA--LKS 196 L Q + T +++ + +KTA +S ++A + V Q+ + Sbjct: 156 LRTALGQYIDMHKKEPTIDNWTLTVTNKTAYYTIWQPFLSGIVASQKIPAEVWQSKPFED 215 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + G+ FQ DD LD G+ GK +G D ++GK + A + G + ++ Sbjct: 216 ALIKAGVLFQCQDDWLDQYGQAAVTGK-VGTDIQDGKVSWLFAKAMEVGNEEQRK 269 >gi|221056306|ref|XP_002259291.1| Farnesyl pyrophosphate synthase [Plasmodium knowlesi strain H] gi|193809362|emb|CAQ40064.1| Farnesyl pyrophosphate synthase, putative [Plasmodium knowlesi strain H] Length = 375 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 43/251 (17%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHV------LLACAIEFIHTATLLHDDVVDDSALRRGK 94 GGK R +L + ++ R N + LA IE + + L+ DD++D RR K Sbjct: 58 GGKYNRGILVILIYEYVKNRDINSIEWEKAACLAWCIEILQASFLVADDIMDKGEKRRKK 117 Query: 95 VAARLVWGNQTSVLVGD-FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL----- 148 L+ +T V D LL + +IE + + +++ T + L+ + Sbjct: 118 YCWYLLKDVETKNAVNDILLLYNSIYKLIEIYLRNESCYVDILS-TFRDATLKTIIGQHL 176 Query: 149 ----------SLSKNLDVTE----------------EDYLHVIKSKTAVL-FSAALEVSS 181 L+K +DV E Y +++ KTA F + Sbjct: 177 DTNIFSDKYTDLNKEIDVNNINVPEQEIININMVNFEVYKNIVIHKTAYYSFFLPIVCGM 236 Query: 182 LIAG--VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 L+ G V N + + ++ M +G FQ+ DD LD + GK +G D +N K T P+I Sbjct: 237 LLGGIAVDNLIYKKIEGISMLMGEYFQVHDDYLDVFADSKNTGK-VGTDIQNNKLTWPLI 295 Query: 240 LAFQRGTKREK 250 AF+ ++ +K Sbjct: 296 KAFELCSESDK 306 >gi|296083873|emb|CBI24261.3| unnamed protein product [Vitis vinifera] Length = 86 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/48 (47%), Positives = 30/48 (62%) Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 Y NLG+AFQL+DDVLD+ G +GK D RNG T P++ A + Sbjct: 6 YAKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRNGIITAPILFAIEE 53 >gi|90078142|dbj|BAE88751.1| unnamed protein product [Macaca fascicularis] Length = 353 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 92 VELLQAFFLVTDDIMDSSLTRRGQICWYQKPGVGLDAINDAILLEACIYRLLKLYCREQP 151 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 152 YYLNLIELFLQSS--YQTEIGQTLDLITAPQGNVDLGRFTEKRYKSIVKYKTAFYSFYLP 209 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK +G D ++ K + Sbjct: 210 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-VGTDIQDNKCS 268 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 269 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 307 >gi|73671769|gb|AAZ80290.1| farnesyl diphosphate synthase [Vibrio sp. JL-73] Length = 147 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 12/145 (8%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLV 136 HDD+ +DD +LRRG+ + + +++L GD L + AF ++ E K ++ + + +V Sbjct: 1 HDDLPGMDDDSLRRGQATCHIAFDEASAILAGDALQTLAFGILAEGKLSAEGDIYRIHMV 60 Query: 137 ACTLAEGELRQLSLSKNLDVTEE------DYLHVI-KSKTAVLFSAALEVSSLIAGVQN- 188 A + L + LD+ E + L I ++KT L A+ + + AG + Sbjct: 61 KELAAASGAMGMCLGQALDLAAEGKRVDLEALETIHRNKTGALIRCAVRLGAYAAGEKGV 120 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLD 213 + + L ++ +G+AFQ+ DD+LD Sbjct: 121 ACLKRLDTFSNAIGLAFQVQDDILD 145 >gi|4503685|ref|NP_001995.1| farnesyl pyrophosphate synthase isoform a [Homo sapiens] gi|209571582|ref|NP_001129293.1| farnesyl pyrophosphate synthase isoform a [Homo sapiens] gi|114560081|ref|XP_001160391.1| PREDICTED: farnesyl pyrophosphate synthase isoform 10 [Pan troglodytes] gi|114560083|ref|XP_001160109.1| PREDICTED: farnesyl diphosphate synthase isoform 4 [Pan troglodytes] gi|114560085|ref|XP_001160151.1| PREDICTED: farnesyl diphosphate synthase isoform 5 [Pan troglodytes] gi|114560087|ref|XP_001160203.1| PREDICTED: farnesyl diphosphate synthase isoform 6 [Pan troglodytes] gi|114560089|ref|XP_001160292.1| PREDICTED: farnesyl diphosphate synthase isoform 8 [Pan troglodytes] gi|215274250|sp|P14324|FPPS_HUMAN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|14603061|gb|AAH10004.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Homo sapiens] gi|55957735|emb|CAI12715.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Homo sapiens] gi|119573461|gb|EAW53076.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), isoform CRA_b [Homo sapiens] gi|119573462|gb|EAW53077.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), isoform CRA_b [Homo sapiens] gi|119573463|gb|EAW53078.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), isoform CRA_b [Homo sapiens] gi|123993591|gb|ABM84397.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [synthetic construct] gi|123998535|gb|ABM86869.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [synthetic construct] gi|158255604|dbj|BAF83773.1| unnamed protein product [Homo sapiens] gi|168269804|dbj|BAG10029.1| farnesyl pyrophosphate synthetase [synthetic construct] Length = 419 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 158 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 217 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 218 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLP 275 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 276 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 334 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 335 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 373 >gi|90109287|pdb|2F7M|F Chain F, Crystal Structure Of Unliganded Human Fpps gi|90109296|pdb|2F89|F Chain F, Crystal Structure Of Human Fpps In Complex With Pamidronate gi|90109297|pdb|2F8C|F Chain F, Crystal Structure Of Fpps In Complex With Zoledronate gi|90109305|pdb|2F8Z|F Chain F, Crystal Structure Of Human Fpps In Complex With Zoledronate And Isopentenyl Diphosphate gi|90109306|pdb|2F92|F Chain F, Crystal Structure Of Human Fpps In Complex With Alendronate gi|90109307|pdb|2F94|F Chain F, Crystal Structure Of Human Fpps In Complex With Ibandronate gi|90109321|pdb|2F9K|F Chain F, Crystal Structure Of Human Fpps In Complex With Zoledronate And Zn2+ gi|303325057|pdb|3N1V|F Chain F, Human Fpps Complex With Fbs_01 gi|303325058|pdb|3N1W|F Chain F, Human Fpps Complex With Fbs_02 gi|303325075|pdb|3N3L|F Chain F, Human Fpps Complex With Fbs_03 gi|303325076|pdb|3N49|F Chain F, Human Fpps Complex With Nov_292 gi|303325079|pdb|3N5H|F Chain F, Human Fpps Complex With Nov_304 gi|303325080|pdb|3N5J|F Chain F, Human Fpps Complex With Nov_311 gi|303325081|pdb|3N6K|F Chain F, Human Fpps Complex With Nov_823 gi|307448381|pdb|3N45|F Chain F, Human Fpps Complex With Fbs_04 And Zoledronic AcidMG2+ gi|307448382|pdb|3N46|F Chain F, Human Fpps Complex With Nov_980 And Zoledronic AcidMG2+ Length = 350 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 89 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 148 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 149 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLP 206 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 207 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 265 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 266 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 304 >gi|197097558|ref|NP_001125620.1| farnesyl pyrophosphate synthase [Pongo abelii] gi|55728661|emb|CAH91070.1| hypothetical protein [Pongo abelii] Length = 419 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 158 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 217 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 218 YYLNLIELFLQSS--YQTEIGQTLDLITAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLP 275 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 276 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 334 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 335 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 373 >gi|213028306|ref|ZP_03342753.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 117 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 5/99 (5%) Query: 170 AVLFSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 L AA+ + +L AG + + L Y ++G+AFQ+ DD+LD G+ +GK G D Sbjct: 1 GALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGAD 60 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 + GK T P +L G ++ +N + I D + S+ L Sbjct: 61 QQLGKSTYPALL----GLEQARNKARDLIEDARQSLHQL 95 >gi|160286554|pdb|3B7L|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With Mg And Minodronate Length = 356 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 95 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 154 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 155 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLP 212 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 213 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 271 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 272 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 310 >gi|31747831|gb|AAO38414.1| Lfe206p1 [Leptospirillum ferrooxidans] Length = 150 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 8/117 (6%) Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 E E R++SL + ++LH + KT L +++ + +L+ S ++L YG + Sbjct: 18 ESEGRKISLD------DLEFLH--RHKTGALILSSVRIGALLGQGGESEMRSLDQYGEAV 69 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 G+AFQ+ DD+LD G+ +GK +D + K T P +L + K K ++ ++ Sbjct: 70 GVAFQIADDLLDVEGDTATLGKAAQKDTDHLKNTYPGLLGIEGAKKMAKEKLEAALD 126 >gi|229015006|ref|ZP_04172083.1| Pre-ComX modifying enzyme [Bacillus mycoides DSM 2048] gi|228746273|gb|EEL96199.1| Pre-ComX modifying enzyme [Bacillus mycoides DSM 2048] Length = 321 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 35/206 (16%) Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS--VLVGDFLLSQAFCMVI--- 122 A +EFI L D++DD L G V L + N+ +LV +LL Q + Sbjct: 78 AMGVEFI----FLSADIIDD--LCDGDVLDPLYFKNEYPRFLLVSQYLLMQGLIYLTYKT 131 Query: 123 -ETKSQEALEALSLVACTLAEGELRQL----SLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 +T +++ L+ L C GE + + S+ K + ++EE+Y+ +I+ K+ +L Sbjct: 132 KDTATRDLLQQLIHSCC----GEWKDIQFCFSIDKKIILSEEEYMKLIEKKSGLL----- 182 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +I N + LK +GIA QL R + N+ + D ++ K LP Sbjct: 183 --TEIIFRTINPENRILKEITSYIGIAGQL-------RNDANDAMTDNKNDLQDLKAYLP 233 Query: 238 VILAFQRGTKREKNFWKSTINDGKIS 263 + A++ K + NF+++ + D +IS Sbjct: 234 FLKAYEYSCKTQDNFFEN-LTDEQIS 258 >gi|40788949|dbj|BAA03523.2| KIAA1293 [Homo sapiens] Length = 420 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 159 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 218 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 219 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLP 276 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 277 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 335 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 336 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 374 >gi|296194290|ref|XP_002744865.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix jacchus] Length = 372 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 28/225 (12%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQAFCMVIETKSQ 127 +E + L+ DD++D S RRG++ W + V + D +L +A C+ K Sbjct: 111 VELLQAFFLMTDDIMDSSLTRRGQIC----WYQKPGVGLDAINDAILLEA-CVYRLLKLY 165 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVLFS 174 + L L Q + + LD+ TE+ Y ++K KTA +S Sbjct: 166 CREQPYYLNLLELYLQSSYQTEIGQTLDLITAPQDNVDLDRFTEKRYKSIVKYKTA-FYS 224 Query: 175 AALEVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L V++ IAG+ A K + +G FQ+ DD LD G+++ GK +G D ++ Sbjct: 225 VYLPVAAAMYIAGIDGEKEHANAKKILLKMGEFFQIKDDYLDLFGDLSVTGK-VGTDIQD 283 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 K + V+ QR T ++ K N G+ E + + + E Sbjct: 284 NKCSWLVVQCLQRSTPEQRQILKE--NYGQKEAEKVARVKALYEE 326 >gi|182405|gb|AAA35820.1| farnesyl pyrophosphate synthetase [Homo sapiens] Length = 346 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 85 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 144 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 145 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLP 202 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 203 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 261 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 262 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 300 >gi|209571584|ref|NP_001129294.1| farnesyl pyrophosphate synthase isoform b [Homo sapiens] gi|114560091|ref|XP_001160248.1| PREDICTED: farnesyl diphosphate synthase isoform 7 [Pan troglodytes] gi|114560093|ref|XP_001160446.1| PREDICTED: farnesyl diphosphate synthase isoform 11 [Pan troglodytes] gi|114560095|ref|XP_001160066.1| PREDICTED: farnesyl diphosphate synthase isoform 3 [Pan troglodytes] gi|114560097|ref|XP_001160341.1| PREDICTED: farnesyl diphosphate synthase isoform 9 [Pan troglodytes] Length = 353 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 92 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 151 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 152 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLP 209 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 210 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 268 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 269 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 307 >gi|239582554|dbj|BAB61886.2| farnesyl diphosphate synthase [Rhodopseudomonas palustris] Length = 147 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 12/145 (8%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 HDD+ +D+S LRRG+ + + T++L GD LL+ AF +V + + L+ Sbjct: 1 HDDLPGMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHKDPTVRLLLTR 60 Query: 139 TLAE-GELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 LA L + + LD+ E D + + KT L +++ Sbjct: 61 VLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQANA 120 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLD 213 +AL YG LG AFQ+ DD+LB Sbjct: 121 DQYRALDDYGRALGEAFQIADDILB 145 >gi|229021074|ref|ZP_04177733.1| Pre-ComX modifying enzyme [Bacillus cereus AH1273] gi|228740234|gb|EEL90573.1| Pre-ComX modifying enzyme [Bacillus cereus AH1273] Length = 321 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 35/206 (16%) Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS--VLVGDFLLSQAFCMVI--- 122 A +EFI L D++DD L G V L + N+ +LV +LL Q + Sbjct: 78 AMGVEFI----FLSADIIDD--LCDGDVLDPLYFKNEYPRFLLVSQYLLMQGLIYLTYKT 131 Query: 123 -ETKSQEALEALSLVACTLAEGELRQL----SLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 +T +++ L+ L C GE + + S+ K + ++EE+Y+ +I+ K+ +L Sbjct: 132 KDTATRDLLQQLIHSCC----GEWKDIQFCFSIDKKIILSEEEYMKLIEKKSGLL----- 182 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +I N + LK +GIA QL R + N+ + D ++ K LP Sbjct: 183 --TEIIFRTINPENRFLKEITSYIGIAGQL-------RNDANDAMTDNKNDLQDLKAYLP 233 Query: 238 VILAFQRGTKREKNFWKSTINDGKIS 263 + A++ K + NF+++ + D +IS Sbjct: 234 FLKAYEYSCKTQDNFFEN-LTDKQIS 258 >gi|328793605|ref|XP_623586.2| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera] Length = 359 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 22/247 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALM------LEYRGDNHVLLACAIEFIHTATLLH 81 E V++Y + GG+R L +A L+ E + +LA +E + ++ Sbjct: 46 EWTAKVLEYNVPKGGRRRSISLIVAYKLLASQDQLTEENIHSARILAWCMEILQAVYIVM 105 Query: 82 DDVVDDSALRRGKVAARLVWGNQ--TSVLVGDFLLSQAFCMVIETKSQ--EALEALSLVA 137 DD++D + +RR + + G VL+ + + F ++K + L S Sbjct: 106 DDIIDHTDMRRNQPTWHVKIGLSAVNDVLLIETCIYDLFKKYFKSKDCYIDILNLFSKYH 165 Query: 138 CTLAEGELRQLSLS------KNLDVTEED-YLHVIKSKTAVL-FSAALEVSSLIAGVQNS 189 +GE + +S NLD+ D Y ++K KT+ F ++ AG+ + Sbjct: 166 KKTVQGECLDVLISTDWGKKSNLDLFSMDRYNTIVKHKTSYYSFVLPFVLAMRFAGITDP 225 Query: 190 --VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +QA K + +G FQ+ DD LD + +GK+ G D + GK T +++A QR T Sbjct: 226 EIYKQAEKIL-LKIGHLFQVRDDYLDCYAKREVIGKS-GTDIQEGKCTWLIVVALQRATA 283 Query: 248 REKNFWK 254 +K K Sbjct: 284 EQKKILK 290 >gi|307111455|gb|EFN59689.1| hypothetical protein CHLNCDRAFT_33543 [Chlorella variabilis] Length = 346 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 23/223 (10%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS---VLVGDFLLSQAFCMVIE 123 L IEF+ L+ DD++D S RRG+ W + V + D ++ +A I Sbjct: 82 LGWCIEFLQAYFLVADDIMDSSITRRGQPC----WYRRPEVGMVAINDGIILEACIFRIL 137 Query: 124 TKSQEA-------LEALSLVACTLAEGELRQLSLSK--NLDV---TEEDYLHVIKSKTAV 171 K A LE V A G+L + + +D+ T + YL ++ KTA Sbjct: 138 KKHFGALPCYVHLLELFHEVTFKTAHGQLLDTTTAPIGTVDLSRYTLDTYLRIVTYKTAF 197 Query: 172 L-FSAALEVSSLIAGVQNSVRQAL-KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 F + +AG+ + L + + +G FQ+ DD LD G+ +GK IG D Sbjct: 198 YTFYLPVACGLRLAGITDPAAYKLAEDICLQMGRYFQIQDDYLDCFGDPEVIGK-IGTDI 256 Query: 230 RNGKPTLPVILAFQRGTKREK-NFWKSTINDGKISVENLKKAF 271 ++ K + V+ A R ++ +K +S D + +V+ +K+ + Sbjct: 257 QDNKCSWLVVQALTRASEEQKAAIEESYGKDEEAAVQRVKEVY 299 >gi|71042523|pdb|1ZW5|A Chain A, X-Ray Structure Of Farnesyl Diphosphate Synthase Protein Length = 355 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 94 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 153 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 154 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLP 211 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 212 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 270 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 271 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 309 >gi|111073607|emb|CAL29452.1| geranyltranstransferase [Wolbachia endosymbiont of Onchocerca volvulus] Length = 243 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 116/242 (47%), Gaps = 30/242 (12%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRL-RPMLTLATALMLEYR 60 K+++ L + + +K IL ++ + ++ + Y++F+ K + RP+L A + + Sbjct: 4 KLIKSLLIAETDK----ILSKVSQNKHIL--AMHYVLFAPTKHIIRPLLITALSQVFNSE 57 Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSA-----------LRRGKVAARLVWGNQTSV 107 + +A A++ +HT +L+ DD+ +D+S + + A LV + Sbjct: 58 A---ISIAVAVKCVHTHSLIQDDLPYIDNSNNNSKNQLSCCYKKFDEATAVLVAEDAPLT 114 Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 L + L S K E +++ S + T +G + + L + + + +H++K Sbjct: 115 LASEILSSPN---KDSNKRHEIIKSPSQMRGT--KGMVGEQVLDSDKNFGKIKKMHLMK- 168 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 TA L +A ++ +++ + R+AL +Y +NLG+ FQ DD +Y +N + K G+ Sbjct: 169 -TAKLLAAPCKIGAIVGDTPDKQRRALYNYRINLGLIFQAEDDTENYEQALNNLSKLRGK 227 Query: 228 DF 229 + Sbjct: 228 HW 229 >gi|17481244|dbj|BAB79205.1| farnesyl diphosphate synthase [Rhodopseudomonas palustris] Length = 147 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 12/145 (8%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 HDD+ +D+S LRRG+ + + T++L GD LL+ AF +V + L+ Sbjct: 1 HDDMPAMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHNDPTVRLLLTR 60 Query: 139 TLAE-GELRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 LA L + + LD+ E D + + KT L +++ Sbjct: 61 VLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQASP 120 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLD 213 +AL YG LG AFQ+ DD+LD Sbjct: 121 DQYRALDDYGRALGEAFQIADDILD 145 >gi|313636097|gb|EFS01975.1| polyprenyl synthetase [Listeria seeligeri FSL S4-171] Length = 157 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMG 222 I KTA LF AL S G + S K Y G LG+AFQ++DDVLDY +G Sbjct: 3 ISGKTAQLF--ALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLG 60 Query: 223 KNIGEDFRNGKPTLPVILAFQ 243 K + D + G +LP+I A + Sbjct: 61 KPVLNDMKQGIYSLPLIYAMK 81 >gi|83772569|dbj|BAE62697.1| unnamed protein product [Aspergillus oryzae] Length = 310 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 5/205 (2%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL + GK +R L A LE D ++ I+ +H A+LL DD+ + S LRRG Sbjct: 27 YLRENPGKDIRAKLIDAFNEFLEVPNDKLDVIKRIIDLLHNASLLIDDIQNSSTLRRGVP 86 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ ++ A + + + + L G+ +L + Sbjct: 87 VAHSIFGVAQTINSANYAYFIAQRELTNLTNPLSFSIYTEELIHLHRGQGMELHWRDTMQ 146 Query: 156 VTEE-DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 E +Y+ + KT LF A+ + + +++ LG+ FQ+ DD + Sbjct: 147 CPSEVEYIEMALDKTGGLFRLAIRLMQAESASGTDYVPLVET----LGLLFQIRDDYQNL 202 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVI 239 + + K ED GK + P+I Sbjct: 203 QSDTYSTNKGFCEDIGEGKFSYPII 227 >gi|121717308|ref|XP_001276070.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1] gi|119404227|gb|EAW14644.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1] Length = 718 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 17/224 (7%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 ++ +H+A+L+ DD+ D+S LRRGK + ++G +V + A + + ++ E Sbjct: 457 VKMLHSASLMLDDLEDNSPLRRGKPSTHSIYGMAQTVNSATYQYITATDITAQLQNSETF 516 Query: 131 EALSLVACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEV----SSLIAG 185 L G+ L + N L T +YL ++ KT LF + S ++ Sbjct: 517 HIFVEELQQLHVGQSYDLYWTHNTLCPTIAEYLKMVDMKTGGLFRMLTRMMIAESPVVDK 576 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR- 244 V NS + + +G FQ+ DD + K ED GK + +I Q Sbjct: 577 VPNS---DMNLFSCLIGRFFQIRDDYQNLASADYAKAKGFAEDLDEGKYSFTLIHCIQTL 633 Query: 245 GTKRE--------KNFWKSTINDGKISVENLKKAFIIMRENRAL 280 +K E + F ++GK+S E ++ + M++ +L Sbjct: 634 ESKPELAGEMMQLRAFLMKRRHEGKLSQEAKQEVLVTMKKTESL 677 >gi|322818356|gb|EFZ25796.1| polyprenyl synthase, putative [Trypanosoma cruzi] Length = 222 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 12/139 (8%) Query: 159 EDYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 ED + I + KT + A + ++ QA++ +G +G+A+Q++DDVL +G Sbjct: 58 EDAVKFIHTCKTGAICGAICSFACILTDASEEDTQAMEEFGKAIGLAYQIIDDVLGVKGF 117 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR-- 275 + K GED R+GK T PV A + ++ S +N+ E +++A ++ Sbjct: 118 EGNL-KEAGEDIRDGKITYPVAKAMGKLELPQRERIWSILNERTSDREKIEEALSLINSA 176 Query: 276 --------ENRALVDTEYR 286 + R LV+ E++ Sbjct: 177 NVIDECVADARQLVEEEWK 195 >gi|296088154|emb|CBI35624.3| unnamed protein product [Vitis vinifera] Length = 87 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/47 (48%), Positives = 30/47 (63%) Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 Y NLG+AFQL+DDVLD+ G +GK D RNG T P++ A + Sbjct: 6 YAKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRNGIITAPILFAIE 52 >gi|153791942|ref|NP_001093301.1| farnesyl diphosphate synthase 2 [Bombyx mori] gi|146424708|dbj|BAF62114.1| farnesyl diphosphate synthase 2 [Bombyx mori] Length = 382 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 119/274 (43%), Gaps = 31/274 (11%) Query: 25 SDVEMIPDVVKYLIFS---GGKRLRPMLTLATALMLEY--RGDNHVL-LAC----AIEFI 74 S+V I D +K ++ GGK R + T+ + +E + H L +AC +E Sbjct: 65 SEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 124 Query: 75 HTATLLHDDVVDDSALRRG-KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 ++ DD++D S++RRG R T L+ + ++T + + Sbjct: 125 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 184 Query: 134 SLVACTLAEGELRQLSLSKNLD------------VTEEDYLHVIKSKTAVLFSAALEVSS 181 + L L + S+ ++LD T + Y +IK K A ++ L VS Sbjct: 185 KMFE--LFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRYYTIIKYK-AAYYTYNLPVSL 241 Query: 182 ---LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 L V + ++ + + +G FQ+ DD +D G+ + GK +G D + K T Sbjct: 242 GLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWLA 300 Query: 239 ILAFQRGTKREKNFWKSTINDGKIS-VENLKKAF 271 + A QR T+ ++ +K+ + + VE +K+ + Sbjct: 301 VQALQRCTEAQRTVFKACYGSSEPAHVERIKRLY 334 >gi|61680786|pdb|1YQ7|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With Risedronate gi|61680822|pdb|1YV5|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With Mg And Risedronate gi|158429256|pdb|2OPN|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-527 gi|162329947|pdb|2OPM|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-461 Length = 374 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 113 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 172 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 173 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLP 230 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 231 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 289 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 290 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 328 >gi|158430745|pdb|2RAH|A Chain A, Human Fdps Synthase In Complex With Novel Inhibitor gi|160286194|pdb|2VF6|A Chain A, Human Fdps Synthase In Complex With Minodronate Length = 378 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 117 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 176 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 177 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLP 234 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 235 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 293 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 294 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 332 >gi|224157048|ref|XP_002337792.1| predicted protein [Populus trichocarpa] gi|222869722|gb|EEF06853.1| predicted protein [Populus trichocarpa] Length = 416 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL 280 MGKN+G+D R GK TLP+I A QRGT + ++ I G S E L I+R AL Sbjct: 1 MGKNLGDDLREGKCTLPLIAAMQRGTPEQAAIVRNAIEQG--STEQLSAVVDIVRSTGAL 58 >gi|260575018|ref|ZP_05843019.1| Geranylgeranyl pyrophosphate synthase-like protein [Rhodobacter sp. SW2] gi|259022640|gb|EEW25935.1| Geranylgeranyl pyrophosphate synthase-like protein [Rhodobacter sp. SW2] Length = 419 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 38/70 (54%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW 101 GK LRP L +AT + L R ++ V A A+E H L+HDD+ D+S RRG + Sbjct: 251 GKGLRPTLVIATCMALGGRFEDGVRAAAALEMFHNGFLVHDDIADESTHRRGLPTLHMSH 310 Query: 102 GNQTSVLVGD 111 G +V GD Sbjct: 311 GIGLAVNAGD 320 >gi|62959203|gb|AAY23709.1| farnesyl diphosphate synthase [Roseobacter sp. JL-126] Length = 147 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 16/147 (10%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KSQEALEAL 133 HDD+ +D+ LRRG+ + + T++L GD L + AF ++ E+ K++ L + Sbjct: 1 HDDMPGMDNDDLRRGQPTCHIAFDEATAILAGDALQTLAFELLSESPLGGLKAERQLSMV 60 Query: 134 SLVA-----CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 + +A + G+ L + V + + H+ + KT L AA + ++ G + Sbjct: 61 NALARASGSAGMCAGQAIDLQATGQ-HVNDHELEHMHRHKTGALIEAAATI-GVLCGEEE 118 Query: 189 SVR--QALKSYGMNLGIAFQLVDDVLD 213 +++ K + +LG+AFQ+ DD+LD Sbjct: 119 ALKWQPHFKEFATHLGLAFQVHDDILD 145 >gi|158286274|ref|XP_308653.4| AGAP007104-PA [Anopheles gambiae str. PEST] gi|157020390|gb|EAA04004.4| AGAP007104-PA [Anopheles gambiae str. PEST] Length = 443 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 17/215 (7%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI---- 122 L AIE +H+ L+ DDV+D S RRG+ + + S + ++ A ++ Sbjct: 181 LGWAIEMLHSMFLIMDDVMDGSVTRRGQPCWHTLDDVKLSGVNDAIMIEAAIAHLVKIQY 240 Query: 123 --ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED---YLHVIKSKTAVL-FSAA 176 E LE + + G+ L +K LDVT+ Y ++ KTA F Sbjct: 241 GNEPYYPRLLELFNEMKFITTIGQSLDLRSAK-LDVTDYSMDLYKSIVFHKTAYYTFYLP 299 Query: 177 LEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + ++ + G + RQA K+ + +G +Q DD D G+ +GK +G D GK Sbjct: 300 VAMAMHLTGYTDPEMFRQA-KTILLEIGQFYQTQDDFFDCFGDPAVIGK-VGTDIAEGKC 357 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 + ++A QR T+ +K K+ G EN+ + Sbjct: 358 SWLAVVAMQRATEEQKEVMKACY--GSTDPENIAR 390 >gi|323450522|gb|EGB06403.1| hypothetical protein AURANDRAFT_59216 [Aureococcus anophagefferens] Length = 313 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 12/204 (5%) Query: 41 GGKRLRPMLTLATALML-EYRGD--------NHVLLACAIEFIHTATLLHDDVVDDSALR 91 GGK R ++ + T ++L E +G +L IE + L+ DD++D S R Sbjct: 22 GGKMNRGLMVVETGVVLFEAQGKPVTNDDLCRFAVLGWIIEMLQAWLLVADDMMDSSLTR 81 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS 151 RG+ V G L FL+ V++ +A E L+ + +L + Sbjct: 82 RGQPCWYKVDGVGPMALNDAFLIEMVMFKVLKRHFGDAPEYAKLLDLLMETTLQTELGPA 141 Query: 152 KNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLVD 209 T + + ++K KTA F + + +AG+ + A + + +G+ FQ D Sbjct: 142 LGPPFTLDRWTMIVKYKTAFYSFYLPVAMGMTMAGIDDRAEYDAAREILVIMGVYFQAQD 201 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGK 233 D LD G ++GK IG D ++ K Sbjct: 202 DYLDAFGTPEQIGK-IGTDIQDKK 224 >gi|317150896|ref|XP_001823830.2| farnesyltranstransferase [Aspergillus oryzae RIB40] Length = 342 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 21/213 (9%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL + GK +R L A LE D ++ I+ +H A+LL DD+ + S LRRG Sbjct: 59 YLRENPGKDIRAKLIDAFNEFLEVPNDKLDVIKRIIDLLHNASLLIDDIQNSSTLRRGVP 118 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G V + S + I + E + ++ ++ EL L + ++ Sbjct: 119 VAHSIFG------VAQTINSANYAYFIAQR--ELTNLTNPLSFSIYTEELIHLHRGQGME 170 Query: 156 V---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + +E +Y+ + KT LF A+ + + +++ LG+ FQ Sbjct: 171 LHWRDTMQCPSEVEYIEMALDKTGGLFRLAIRLMQAESASGTDYVPLVET----LGLLFQ 226 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + DD + + + K ED GK + P+I Sbjct: 227 IRDDYQNLQSDTYSTNKGFCEDIGEGKFSYPII 259 >gi|326200898|ref|ZP_08190770.1| hypothetical protein Cpap_3722 [Clostridium papyrosolvens DSM 2782] gi|325988466|gb|EGD49290.1| hypothetical protein Cpap_3722 [Clostridium papyrosolvens DSM 2782] Length = 343 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/222 (22%), Positives = 103/222 (46%), Gaps = 19/222 (8%) Query: 44 RLRPMLTLATALMLEYRGDNHVLL-----AC-AIEFIHTATLLHDDVVDDSALRRGKVAA 97 ++RP++ ++ ML+ DN + C A +F++ A + DD++D+S +R + Sbjct: 58 KIRPVIF--SSYMLKSLTDNIDFVNNFNKVCFAFDFLYNAAHIQDDLIDESEVRESRKCT 115 Query: 98 RLVWGNQTSVLVGDFLLSQA---FCMVIETKSQEALEALSLV-----ACTLAEGELRQLS 149 LV+G ++L + L+ +A F I++ ++L L+ A ++EG+ R ++ Sbjct: 116 YLVFGRDYTLLASNILIFKAVELFLDFIKSTDLPKDKSLKLMGAFNYAYLISEGKSRDVA 175 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 S+ + Y +++ + VL +E+ ++ G + + LG+ ++D Sbjct: 176 -SRGKVNDYDTYERIVRDQVGVLMRGIIELPYIVTG--SEFPDEVFKLSEILGLLAHILD 232 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 D LD G E+G+ D + L + +Q+ E N Sbjct: 233 DFLDVFGFEKELGRAQASDIKMQCANLFTCILYQKIGADEYN 274 >gi|145609315|ref|XP_367595.2| hypothetical protein MGG_07506 [Magnaporthe oryzae 70-15] gi|145016701|gb|EDK01131.1| hypothetical protein MGG_07506 [Magnaporthe oryzae 70-15] Length = 725 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 27/189 (14%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 + +H A+L+ DDV D+S LRRG +A +V+G ++ ++ + + +AL Sbjct: 463 VRIMHNASLMLDDVHDNSPLRRGSPSAHIVFGTAQTINSAGYVTIKCVDLARRRLGDDAL 522 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSS 181 +C L+ EL QL L ++ D+ + Y ++ KT LF A + Sbjct: 523 ------SCLLS--ELGQLHLGQSHDLAWTFHCRAPSMAGYYSHLEQKTGGLFRLAARMMR 574 Query: 182 LIAGVQNSVRQALKSYGMN--LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 A QN + L + G+ LG +QL DD D E + +D G TLP+I Sbjct: 575 ASA-TQN---RHLDACGLMSLLGRLYQLRDDYQDITSET----LSTYDDLDEGSFTLPLI 626 Query: 240 LAFQRGTKR 248 A +R K Sbjct: 627 HALEREDKH 635 >gi|62959171|gb|AAY23693.1| farnesyl diphosphate synthase [Erythrobacter longus] Length = 147 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 10/134 (7%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-TKSQEALEALSLVACTLAEGELRQL 148 LR GK V+ T+VL GD L + AF ++ + S + L+A + + Sbjct: 12 LRHGKATLHHVYDEATAVLAGDALHALAFEILADHGTSSDPFVRSELIATLGTASGMNGM 71 Query: 149 SLSKNLDVT--EEDYLHVIKS-------KTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + + +D+ EE + +++ KT L S A+E+ +++ V R L++Y Sbjct: 72 AGGQMMDMVADEEGVTYDLQAITRLQQLKTGALLSCAVEMGAVLGKVPVEGRAHLRAYSR 131 Query: 200 NLGIAFQLVDDVLD 213 ++G+AFQ+ DD+LD Sbjct: 132 DIGLAFQIADDILD 145 >gi|219127608|ref|XP_002184024.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404747|gb|EEC44693.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 343 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL-SQAFCMVIET 124 +L AIEF+ L+ DDV+DDS RRG+ + Q + FLL S F ++ Sbjct: 72 VLGWAIEFLQAFFLVADDVMDDSQTRRGQPCWYKLPDVQLVAINDSFLLESFVFAILRRH 131 Query: 125 KSQEA--LEALSLVACTLAEGELRQLSLSKNLDVTEED-------------------YLH 163 E L L L+ + EL QL LD+T + Y Sbjct: 132 FGHEPFYLHLLELMLDVTHKTELGQL-----LDLTSQPPQHHDQPHHVDLDRFTLTRYQQ 186 Query: 164 VIKSKTAVL-FSAALEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 ++K KTA F + + +++GV ++ A ++ +G FQ+ DD LD G+ + Sbjct: 187 IVKYKTAFYSFYLPVAMGMILSGVTDAPALAQARTICCLMGEYFQIQDDYLDCFGDPAVI 246 Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 GK +G D ++ K + V+ A R T +++ Sbjct: 247 GK-VGTDIQDNKCSWLVVQALARCTPAQRD 275 >gi|63022077|gb|AAY26574.1| farnesyl diphosphate synthase-like protein [Choristoneura fumiferana] Length = 397 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 37/264 (14%) Query: 19 ILKRICSDVEM--IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDNHV----- 65 IL I ++ E+ +P+V +L +GGK+ R + TL MLE + +N Sbjct: 69 ILNTITTNSELTEVPEVANWLKKVLEYNLAGGKKARGLTTLFAYEMLE-KPENITEETIY 127 Query: 66 ---LLACAIEFIHTATLLHDDVVDDSALRRG-KVAARLVWGNQTSVLVGDFLLSQAFCMV 121 L +E + ++ DD++D S RRG +L +V + S F ++ Sbjct: 128 LAKTLGWCVEILQGFLVMLDDIMDGSTTRRGVPCWYQLPEVGLAAVNDSSLMFSSIFYVL 187 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE-------------EDYLHVIKSK 168 ++ A + + L L S+ ++LDVT E Y ++K K Sbjct: 188 ---RAHFADKKIYTNLVELFNESLMHTSIGQHLDVTMERRQKSDYSLFTIERYNAIVKYK 244 Query: 169 TAVL-FSAALEVSSLIAGVQNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 TA + + + L+A + + V Q + + +G FQ+ DD +D G+ + GK +G Sbjct: 245 TAYYTYQLPVCLGMLLANISDPVLHQKAEDMCLEIGKFFQIQDDYIDCYGDESLTGK-MG 303 Query: 227 EDFRNGKPTLPVILAFQRGTKREK 250 D + K + ++A QR + +K Sbjct: 304 TDIQEAKCSWLAVMALQRCSASQK 327 >gi|2644975|emb|CAA05825.1| IspA protein; partial [Wolinella succinogenes] Length = 163 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 6/101 (5%) Query: 31 PDVVKYL---IFSGGKRLRPMLTLAT-ALMLEYRGDNHVLLACAIEFIHTATLLHDDV-- 84 P +YL + +GGKR RP L L + + + A A+E +HT +L+HDD+ Sbjct: 26 PHYNEYLWEMVRNGGKRFRPRLLLGVVSALAPLLVKSAYAPALALEILHTYSLIHDDLPA 85 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +D++A RRG + + ++VL GD L + AF ++ + Sbjct: 86 MDNAATRRGHPTLHVKYDEASAVLAGDALNTHAFYLLAQAP 126 >gi|217074292|gb|ACJ85506.1| unknown [Medicago truncatula] Length = 146 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 2/85 (2%) Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 +++H+ KTA L A+ + +++ G + + L+ + +G+ FQ+VDD+LD Sbjct: 25 EFIHL--HKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQ 82 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQR 244 E+GK G+D K T P +L ++ Sbjct: 83 ELGKTAGKDLVADKVTYPKLLGIEK 107 >gi|119193350|ref|XP_001247281.1| hypothetical protein CIMG_01052 [Coccidioides immitis RS] Length = 499 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 20/180 (11%) Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DD+ D S LRRG AA +++G+ ++ ++L +A + K++E C + Sbjct: 251 DDIQDGSELRRGFPAAHVIYGSSQTINSSTYILVKAVERLQRLKNEE--------CCVVF 302 Query: 142 EGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 E R L + + LD+ + +DY+ ++ +KT F A + ++A +S Sbjct: 303 YEESRNLCVGQGLDLYWRHHVQCPSVDDYITMVDNKTGSFFRLATRL--MVAAAPSSFGS 360 Query: 193 A-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 A L +G +Q+ DD + + K +D GK +LP+I Q ++ + Sbjct: 361 AELFQLVSLMGRYYQIRDDYQNLASDEYAAKKGFCDDLSEGKFSLPLIHFLQHAPSQKAD 420 >gi|123491638|ref|XP_001325885.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3] gi|121908791|gb|EAY13662.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3] Length = 334 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 21/235 (8%) Query: 41 GGKRLRPMLTLATALMLE-YRGDNH-----VLLACAIEFIHTATLLHDDVVDDSALRRGK 94 GGK LR ++T A L L Y D+ L E IH L+ DD++D S RRG+ Sbjct: 44 GGKMLRGIMTAAVYLELTGYSPDSEEAKVGYYLGWVEEIIHAGYLIADDLMDQSETRRGQ 103 Query: 95 VA--ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA---LSLVACTLAEGELRQLS 149 R G+Q V D L+ Q V+ K + L L+ + G + Sbjct: 104 ECWYKREEIGDQA---VNDGLILQDLAYVLLDKIRNKLNTKYYAKLIEFSRKIGTYTTIG 160 Query: 150 LSKNLDV---TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR---QALKSYGMNLGI 203 + + + ++Y ++ KTA + V LI V + ++ + + LG Sbjct: 161 QTYDFIAKIPSFQEYNQIVTYKTAFYTVVSPIVFGLIGSQIYDVDDKFEDIEKFMIRLGN 220 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 FQ+ DD +D G+ GK IG D ++ K + A++ +K K I Sbjct: 221 YFQVQDDYIDVYGDPKHTGK-IGTDIQDAKISWCYCKAYELANDDQKKILKEKIG 274 >gi|3395483|emb|CAA08919.1| dimethylallyltransferase [Drosophila melanogaster] Length = 380 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 24/247 (9%) Query: 24 CSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALML----EYRGDNHVL---LACAIEFIH 75 CSD + V++Y + GK+ R +LT+ T L + +N L L +E + Sbjct: 68 CSDAAKWFAQVLQYNV-PRGKKNRGILTVLTYKNLVPTQDLTPENIKLAQYLGWCVEMLQ 126 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-- 133 + ++ DDV+D+S RRG+ V N + D L+ + I K L+ Sbjct: 127 SFFIISDDVMDNSTTRRGQPCWHKV-ENVGLTAINDALMIENAMYAILKKHFSHLDCYVA 185 Query: 134 ------SLVACTLAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVL-FSAALEVSSLIAG 185 + T L QL+ ++ + + T E+Y ++++KTA F ++ +AG Sbjct: 186 LMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYYSFYLPFALALHLAG 245 Query: 186 VQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ + RQ+ K+ + +G FQ+ DD LD G GK IG D ++ K + ++A Q Sbjct: 246 YKDAEAFRQS-KTILLEMGNFFQVQDDFLDCFGNPEVTGK-IGTDIQDNKCSWLAVVAMQ 303 Query: 244 RGTKREK 250 R +K Sbjct: 304 RANVEQK 310 >gi|296133277|ref|YP_003640524.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermincola sp. JR] gi|296031855|gb|ADG82623.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermincola potens JR] Length = 526 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 7/167 (4%) Query: 43 KRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102 K L P + + T M + +A I+FI+ A +H + D + G Sbjct: 44 KYLHPAVIILTGRMFGLYEEKLYSMAAIIQFIYLAANVHFRIPDYDP---DPAETDVKDG 100 Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162 Q VLVGD+L + F + + + LE L+ + C + G + + ++N EE L Sbjct: 101 VQYPVLVGDYLYGRFFTTLCKGQIIHLLEPLADIICEMNVGGILR---TQNYQSREEK-L 156 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 VI+ ++A L ++ +AGV + ++G N+G+ + +++ Sbjct: 157 VVIEKESASLLREGCRLTGSLAGVSAQDLDNIGNFGYNIGMGYGMLE 203 >gi|145344237|ref|XP_001416643.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576869|gb|ABO94936.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 348 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 32/226 (14%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQ----- 116 +++ IEF+ L+ DD++D+S RRG+ W Q V + D +L + Sbjct: 82 MVVGWCIEFLQAYFLVADDIMDESVTRRGQPC----WYRQPDVKMTAINDGILLEMMLYK 137 Query: 117 ---AFCMVIETKSQEALEALSLVACTLAEGELRQL--------SLSKNLDVTEEDYLHVI 165 +C +E + + +E V A G+L L LSK T E Y+ ++ Sbjct: 138 CLKKYCKGLECYA-DLVELFHDVTYQTASGQLIDLITAPIGVVDLSK---YTMEAYMRIV 193 Query: 166 KSKTAVL-FSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 KTA F + + GV++ + + + LG FQ+ DD LD G+ +GK Sbjct: 194 TYKTAFYTFYLPAACAMRLCGVKDEAAYEKANEICIKLGQFFQIQDDYLDCYGDPEVIGK 253 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 IG D ++ K V+ A + T ++ + N G+ E KK Sbjct: 254 -IGTDIQDNKCGWLVVQALLKCTDEQRKIIEE--NYGRADAECEKK 296 >gi|160893233|ref|ZP_02074021.1| hypothetical protein CLOL250_00779 [Clostridium sp. L2-50] gi|156865316|gb|EDO58747.1| hypothetical protein CLOL250_00779 [Clostridium sp. L2-50] Length = 127 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Query: 160 DYLH-VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 D LH V ++KT L A++ + +++AG + ++ ++G+AFQ+ DD+LD G+ Sbjct: 4 DQLHFVYENKTGALIEASMMIGAVLAGATEDELKQVEMIASDIGLAFQIQDDLLDILGDS 63 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +GK + D NGK T I + K Sbjct: 64 AVLGKPVCSDEENGKVTYVTIHGLEESKK 92 >gi|301166557|emb|CBW26133.1| geranyltranstransferase [Bacteriovorax marinus SJ] Length = 311 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 26/219 (11%) Query: 19 ILKRICSDVEM-IP-----DVVKYLIFSGGKRLRPMLTLATALMLEY--RGDNHVL---- 66 I++ I + +E+ IP +V +Y + GK RP L +A+ +Y D+ L Sbjct: 6 IIRNIETHLELVIPKHNFSEVYRYGVLPPGKAFRPQL--VSAIYADYCNESDHKFLEDPK 63 Query: 67 -----LACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 LA A+E H TLLHDD+ RRGK A + + ++L GD L + +F Sbjct: 64 TPVNYLASAVEVHHAYTLLHDDLPSMDDDDTRRGKPATHIKFNEWKALLAGDGLQTASFA 123 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQ---LSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 ++ + + L + L L Q L LS+ + ++ + + KTA L + Sbjct: 124 LLAKYGHKNLGLILKFFSWALGPKGLIQGQYLDLSEEMTKGIDELILTHQYKTARLIQTS 183 Query: 177 LEVSSLIAGVQNSVRQALKSY--GMNLGIAFQLVDDVLD 213 + + + R + + + G ++G+ FQL+DD+ + Sbjct: 184 ILLGYWSSSATTDYRTSKQLFRLGHSVGVVFQLLDDLTE 222 >gi|195029339|ref|XP_001987531.1| GH19915 [Drosophila grimshawi] gi|193903531|gb|EDW02398.1| GH19915 [Drosophila grimshawi] Length = 413 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 27/202 (13%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 L +E + + ++ DDV+D+S RRG+ +V + + ++ A +++ Sbjct: 151 LGWCVEMLQSFFIISDDVMDNSTTRRGQKCWHMVENVGLNAINDALMIENAMYAILK--- 207 Query: 127 QEALEALSLVACTLAEGEL-RQLS-----------LSKNLDVTE---EDYLHVIKSKTAV 171 + S + C +A EL +++ L+ N V+E ++Y ++++KTA Sbjct: 208 ----QHFSHLDCYVALMELFHEITYITTCGQSLDLLNSNKSVSEFSMDNYKAIVENKTAY 263 Query: 172 L-FSAALEVSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 F ++ +AG ++ + RQ+ K+ + +G FQ+ DD LD G GK IG D Sbjct: 264 YSFYLPFAIAMHLAGYKDPEAFRQS-KTILLEMGNFFQVQDDFLDCFGNPEVTGK-IGTD 321 Query: 229 FRNGKPTLPVILAFQRGTKREK 250 ++ K + ++A QR +K Sbjct: 322 IQDNKCSWLAVVAMQRANAEQK 343 >gi|114560101|ref|XP_001160023.1| PREDICTED: farnesyl diphosphate synthase isoform 2 [Pan troglodytes] Length = 354 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 23/223 (10%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 92 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 151 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVLFSAAL 177 L+L+ L Q + + LD+ TE+ Y ++K KTA +S L Sbjct: 152 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTA-FYSFYL 208 Query: 178 EVSS---LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 +++ + AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K Sbjct: 209 PIAAAMYMAAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNK 267 Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + V+ QR T + K N G+ E + + + E Sbjct: 268 CSWLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 308 >gi|260789526|ref|XP_002589797.1| hypothetical protein BRAFLDRAFT_115262 [Branchiostoma floridae] gi|229274980|gb|EEN45808.1| hypothetical protein BRAFLDRAFT_115262 [Branchiostoma floridae] Length = 371 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 78/155 (50%), Gaps = 7/155 (4%) Query: 67 LACAIEFIHTATLLHDDVVD-DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H VV+ + + +GN+ +VL GDFLL+ A + + + Sbjct: 119 LAEITEMIHTAYLMHRGVVNLEEVTSADGTVGDMSFGNKMAVLSGDFLLANACTGLAQLR 178 Query: 126 SQEALEALSLVACTLAEGEL------RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + +E +S + EG + ++ + D T +D+ + + L + + + Sbjct: 179 NTKVVEIVSSAIADMMEGSFLLEQDNQGVTFLPDKDWTIKDWTNHSFLCSGSLIAKSCQA 238 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 + ++AG + +++ +YG ++ +A +L D+L + Sbjct: 239 AMMLAGHRLDIQKKAYNYGKHMALAHRLHADLLPF 273 >gi|63103159|gb|AAY33485.1| farnesyl diphosphate synthase-like protein [Choristoneura fumiferana] Length = 397 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 114/264 (43%), Gaps = 37/264 (14%) Query: 19 ILKRICSDVEM--IPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDNHV----- 65 IL I ++ E+ +P+V +L +GGK+ R + TL MLE + +N Sbjct: 69 ILNTITTNSELTEVPEVANWLKKVLEYNLAGGKKARGLTTLFAYEMLE-KPENITEETIY 127 Query: 66 ---LLACAIEFIHTATLLHDDVVDDSALRRG-KVAARLVWGNQTSVLVGDFLLSQAFCMV 121 L +E + ++ DD++D S RRG +L +V + S F V Sbjct: 128 LAKTLGWCVEILQGFLVMLDDIMDGSTTRRGVPCWYQLPEVGLAAVNDSSLMFSSIF-YV 186 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE-------------EDYLHVIKSK 168 + + +LV L L S+ ++LDVT E Y ++K K Sbjct: 187 LHAHFADKKIYTNLVE--LFNESLMHTSIGQHLDVTMERRQKSDYSLFTIERYNAIVKYK 244 Query: 169 TAVL-FSAALEVSSLIAGVQNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 TA + + + L+A + + V Q + + +G FQ+ DD +D G+ + GK +G Sbjct: 245 TAYYTYQLPVCLGMLLANISDPVLHQKAEDMCLEIGKFFQIQDDYIDCYGDESLTGK-MG 303 Query: 227 EDFRNGKPTLPVILAFQRGTKREK 250 D + K + ++A QR + +K Sbjct: 304 TDIQEAKCSWLAVMALQRCSASQK 327 >gi|195402409|ref|XP_002059798.1| GJ15042 [Drosophila virilis] gi|194140664|gb|EDW57135.1| GJ15042 [Drosophila virilis] Length = 415 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 36/253 (14%) Query: 24 CSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALML----EYRGDNHVL---LACAIEFIH 75 CSD + V++Y + GK+ R +LT+ T L E +N L L +E + Sbjct: 103 CSDAAKWFAQVLQYNV-PRGKKNRGILTVLTYKNLVPAEELTPENIKLAQYLGWCVEMLQ 161 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 + ++ DDV+D+S RRG+ V + + ++ A +++ + S Sbjct: 162 SFFIISDDVMDNSTTRRGQKCWHKVENVGLTAINDALMIENAMYAILK-------QHFSH 214 Query: 136 VACTLAEGELRQ-----LSLSKNLDV----------TEEDYLHVIKSKTAVL-FSAALEV 179 + C +A EL + ++LD+ T E+Y ++ +KTA F + Sbjct: 215 LDCYVALMELFHEIAYITTCGQSLDLLNSHKRVSEFTMENYKAIVDNKTAYYSFYLPFAL 274 Query: 180 SSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +AG ++ + RQ+ K+ + +G FQ+ DD LD G GK IG D ++ K + Sbjct: 275 AMHLAGYKDAEAFRQS-KTILLEMGHFFQVQDDFLDCFGNPEVTGK-IGTDIQDNKCSWL 332 Query: 238 VILAFQRGTKREK 250 ++A QR ++ Sbjct: 333 AVVAMQRANAEQR 345 >gi|238504512|ref|XP_002383487.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] gi|220690958|gb|EED47307.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] Length = 368 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 9/214 (4%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +L + + ++L+ DD+ D S LRRG AA + +G ++ +++++ V Sbjct: 110 AVLTDVMTMLQNSSLMLDDIEDGSQLRRGAPAAHVKYGLSQTINSTTYIIAKIVSDVQTH 169 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLI 183 E + LS TL G+ L+ + N +YL +I KT F L + + Sbjct: 170 LRPECAKVLSEELQTLTLGQALDLNWTFNKKCPSVNEYLVMIDHKTGGFFRLMLRIMEIE 229 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + L+ LG +Q+ DD + + K +D GK + P+I + Sbjct: 230 ANA--TPNDELRHLITLLGRYYQIRDDYQNLASDEYTAKKGFCDDLSEGKFSFPLIHLLE 287 Query: 244 R----GTKREKNFWKSTINDGKISVENLKKAFII 273 T + F + +++G++S E K++II Sbjct: 288 HSPNASTLHQMIFGRQPVDEGEMSEET--KSYII 319 >gi|182399|gb|AAA52423.1| farnesyl pyrophosphate synthetase (EC 2.5.1.1) [Homo sapiens] Length = 353 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG+ G + LL +++ +E Sbjct: 92 VELLQAFFLVADDIMDSSLTRRGQTCWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 151 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 152 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLP 209 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 210 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 268 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 269 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 307 >gi|148235461|ref|NP_001090113.1| farnesyl diphosphate synthase [Xenopus laevis] gi|76779745|gb|AAI06511.1| MGC131256 protein [Xenopus laevis] Length = 348 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 34/273 (12%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---E 58 ++++DLT +D+ + + + +V++Y GGK R + LA+ L E Sbjct: 18 QIVQDLTSEDLGH------PEVGDAITRLKEVLEYNT-PGGKCNRGVTVLASYKELVGPE 70 Query: 59 YRGDNHVLLACAI----EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 + D ++ A A+ E + L+ DD++D+S RRG+ G + FLL Sbjct: 71 LQKDGNLQRALAVGWCVELLQAFFLVADDIMDNSVTRRGQPCWYRKEGIGLDAVNDSFLL 130 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-------------TEEDY 161 ++ + LSL+ L Q L + LD+ TE+ Y Sbjct: 131 EAGIYRILRKYCRGKPYYLSLLELFLETS--YQTELGQALDLITAQPGKVDLNRYTEKRY 188 Query: 162 LHVIKSKTAVLFSAALEVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEV 218 ++K KTA +S L V++ +AG+ K+ + +G FQ+ DD LD G+ Sbjct: 189 KAIVKYKTA-FYSFYLPVAAAMYMAGIAGEAEHKNAKTILLEMGEFFQIQDDYLDCYGDP 247 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + GK IG D ++ K V+ A +R + ++ Sbjct: 248 SVTGK-IGTDIQDNKCGWLVVEALKRVSPEQRQ 279 >gi|145613371|ref|XP_363775.2| hypothetical protein MGG_01701 [Magnaporthe oryzae 70-15] gi|145020455|gb|EDK04584.1| hypothetical protein MGG_01701 [Magnaporthe oryzae 70-15] Length = 702 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 29/207 (14%) Query: 34 VKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 ++Y+ K R L + L+ ++ I +H ++LL DD+ DDS LRRG Sbjct: 425 IRYIQSMPSKGFRAALVDCYNMWLDVPQREMEIIKTVINCLHDSSLLLDDIEDDSKLRRG 484 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 A LV+G ++ +L QA G+ L + N Sbjct: 485 FPATHLVYGPAATINSATYLYVQALFF----------------------GQSLDLHWTFN 522 Query: 154 LDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ------NSVRQALKSYGMNLGIAFQ 206 + T+ Y ++I+ KT S E+ +++ +S +++ G+ FQ Sbjct: 523 RECPTKTQYFNMIEQKTGAFLSLVAELMMVVSAASDYESSTDSPENIFQTFSYQSGLYFQ 582 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + DD L+ K ED K Sbjct: 583 VRDDYLNITSADYADKKGFAEDLDEQK 609 >gi|302812791|ref|XP_002988082.1| hypothetical protein SELMODRAFT_159144 [Selaginella moellendorffii] gi|300144188|gb|EFJ10874.1| hypothetical protein SELMODRAFT_159144 [Selaginella moellendorffii] Length = 363 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 129/286 (45%), Gaps = 31/286 (10%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALML---EYRGDNHVLLACA----IEFIHTATLL 80 E + +V+ Y + GGK R + + + ++L E ++ + LA A IE++ L+ Sbjct: 53 EWVSEVLDYNV-PGGKLNRGLSVVDSLVLLRSGEELSEDELFLAFALGWCIEWLQAYFLI 111 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSV-LVG---DFLLSQAFCMVIETK------SQEAL 130 DD++DDS RRG+ W Q V L+ LL +++ Q+ Sbjct: 112 LDDIMDDSHTRRGQPC----WFRQPKVGLIAANDGILLRNHISRILKRHFHDKPYYQDLR 167 Query: 131 EALSLVACTLAEGELRQL--SLSKNLDVTE---EDYLHVIKSKTAVL-FSAALEVSSLIA 184 E V A G++ L + +D+++ + YL ++K KTA F + + ++ Sbjct: 168 ELFDEVEYQTACGQMLDLITTPPGEVDLSKYVMDTYLRIVKYKTAYYSFYLPVACALYMS 227 Query: 185 GVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G + + ++ + + +G FQ+ DD LD G + +GK +G D + K + ++ A Sbjct: 228 GEDDKSKFESAERILVQMGTYFQIQDDYLDCYGHPDVIGK-VGTDIEDTKCSWLIVQAIA 286 Query: 244 RGTKREKN-FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288 R + +K+ + + V +KK + + + +D E +Y Sbjct: 287 RASPEQKSRLYNNYGRKDPACVAEVKKVYNELNLEKLFLDYESESY 332 >gi|307203134|gb|EFN82314.1| Farnesyl pyrophosphate synthetase [Harpegnathos saltator] Length = 402 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 36/262 (13%) Query: 23 ICSDVEMIPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDNHV--------LLA 68 I S+ +PDV ++L GGK R LTL A + D +LA Sbjct: 81 IASEELNLPDVTEWLTKVLEYNVPGGKNTRA-LTLLYAYQMLTPADRMTRENIYLARILA 139 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQAFCMVIETK 125 +E + L+ DD+ D S +RR + L W +V + D ++ + + K Sbjct: 140 WCMELLQGFLLILDDIEDRSLIRRKQ----LCWYRHENVGLAAINDAVMIENVMYYLLRK 195 Query: 126 SQEALEALSLVACTLAEGELRQL--------SLSKNLDV---TEEDYLHVIKSKTAVL-F 173 + E + T E ++ L + K LD+ T + Y + KTA F Sbjct: 196 HFKGRECYIDILETFQEIMMKTLMGQCLEFTNFGKTLDLDRFTMDRYDGIAYYKTAYYTF 255 Query: 174 SAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + V+ AG+++ + + ++ +G +Q+ DD L G +GK +G D G Sbjct: 256 VLPMSVAMHFAGIKSRELFEEARTILTKIGHFYQIQDDYLSCYGNRKTLGK-VGTDIEEG 314 Query: 233 KPTLPVILAFQRGTKREKNFWK 254 K T ++ A QR T+ ++N K Sbjct: 315 KCTWLIVTALQRVTREQRNVLK 336 >gi|289806419|ref|ZP_06537048.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 153 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 34 EAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDD 93 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 LRRG + +G ++L GD L + AF ++ + E Sbjct: 94 LRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPE 132 >gi|157834058|pdb|1UBV|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase gi|157834059|pdb|1UBW|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase gi|157834061|pdb|1UBY|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase Length = 367 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 25/251 (9%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHV-LLACA------IEFIHTATLLHDDVVDDSALRR 92 GGK R + +A L G L CA IE A+L+ DD++D S RR Sbjct: 68 PGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELFQAASLVADDIMDQSLTRR 127 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAEGELRQL- 148 G++ G + FLL + V++ ++ + L L T + EL Q+ Sbjct: 128 GQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVHLLELFLQTAYQTELGQML 187 Query: 149 ----SLSKNLDV---TEEDYLHVIKSKTAVLFSAALEVSSLIAGV---QNSVRQALKSYG 198 + +D+ +EE Y ++K KTA +S L V++ + V + K+ Sbjct: 188 DLITAPVSKVDLSHFSEERYKAIVKYKTA-FYSFYLPVAAAMYMVGIDSKEEHENAKAIL 246 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + +G FQ+ DD LD G+ G +G D ++ K + V+ QR T ++ + N Sbjct: 247 LEMGEYFQIQDDYLDCFGDPALTGA-VGTDIQDNKCSWLVVQCLQRVTPEQRQLLED--N 303 Query: 259 DGKISVENLKK 269 G+ E + K Sbjct: 304 YGRKEPEKVAK 314 >gi|281201286|gb|EFA75498.1| geranylgeranyl diphosphate synthase 1 [Polysphondylium pallidum PN500] Length = 300 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 48/211 (22%), Positives = 96/211 (45%), Gaps = 7/211 (3%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KY+ + GK +R +L A L+ + +A ++ +H ++LL DD+ D+S LRRG Sbjct: 21 KYISETPGKGIRTILIEAFNHWLKVDSEYVKKVADIVQALHMSSLLIDDIEDNSKLRRGM 80 Query: 95 VAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 A ++G ++ + + L+ C + + + ++ +G L Sbjct: 81 PVAHDIYGYAQTINCANTVYFLAMDECNKLGKPAATTIFIEEMIRLHRGQG-YDILWRDT 139 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 N TE++Y ++ KT LF L + + + + ++ +LG+ +Q+ DD + Sbjct: 140 NSCPTEDEYKEMVGEKTGGLFRLGLRLLQTFSENKTDYSKLVE----DLGLYYQIRDDYI 195 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + ++ K+ ED GK + P+I A Sbjct: 196 NLVSADYQVNKSFCEDITEGKFSFPIIKAIH 226 >gi|67008257|emb|CAJ00342.1| putative geranylgerannylpyrophosphate synthase [Andrographis paniculata] Length = 141 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 21/139 (15%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEALEALS-LVACTLAEGE 144 LRRGK V+G +VL GD LL+ AF + + + A+ L C AEG Sbjct: 1 LRRGKPTNHKVYGEDVAVLAGDALLAFAFEHLATATEDVPTNMVVSAIGELSRCIGAEG- 59 Query: 145 LRQLSLSKNLDVTEE----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L + +D+ E +++H+ KTA L ++ + +++ G S + L Sbjct: 60 ---LVAGQVVDICSEGISEVGLELLEFIHL--HKTAALLEGSVVLGAILGGATESEVERL 114 Query: 195 KSYGMNLGIAFQLVDDVLD 213 + + +G+ FQ+VDD+LD Sbjct: 115 RKFARCIGLLFQVVDDILD 133 >gi|195476038|ref|XP_002090289.1| GE13024 [Drosophila yakuba] gi|194176390|gb|EDW90001.1| GE13024 [Drosophila yakuba] Length = 419 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 24/247 (9%) Query: 24 CSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALML----EYRGDNHVL---LACAIEFIH 75 CSD + V++Y + GK+ R +LT+ T L + +N L L +E + Sbjct: 107 CSDAAKWFAQVLQYNV-PRGKKNRGILTVLTYKNLVPAQDLTPENIKLAQYLGWCVEMLQ 165 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-- 133 + ++ DDV+D+S RRG+ V N + D L+ + I K L+ Sbjct: 166 SFFIISDDVMDNSTTRRGQPCWHKV-ENVGLTAINDALMIENAMYAILKKHFSHLDCYVA 224 Query: 134 ------SLVACTLAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVL-FSAALEVSSLIAG 185 + T L QL+ ++ + + T E+Y ++++KTA F ++ +AG Sbjct: 225 LMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYYSFYLPFALALHLAG 284 Query: 186 VQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ + RQ+ K+ + +G FQ+ DD LD G GK IG D ++ K + ++A Q Sbjct: 285 FKDAEAFRQS-KTILLEMGNFFQVQDDFLDCFGNPEVTGK-IGTDIQDNKCSWLAVVAMQ 342 Query: 244 RGTKREK 250 R +K Sbjct: 343 RANVEQK 349 >gi|212530618|ref|XP_002145466.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium marneffei ATCC 18224] gi|210074864|gb|EEA28951.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium marneffei ATCC 18224] Length = 297 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 18/150 (12%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 I+ +H ++L+ DD+ DDS LRRG + +V+G ++ ++L A M + S Sbjct: 144 TIDTLHNSSLMLDDIEDDSPLRRGFPSTHVVFGISQTINAANYLYVIALEMAQKLNSPAC 203 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVS 180 L EL++L + ++LD+ + E+YL ++ KT LF +++ Sbjct: 204 LNVFI--------EELKRLHIGQSLDLYWTANVQCPSLEEYLKMVDHKTGGLFQMVAKLT 255 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 +L + V V L + G FQ+ DD Sbjct: 256 ALRSPVVRRVPDLLNMTTL-FGRYFQIRDD 284 >gi|229024511|ref|ZP_04180958.1| Pre-ComX modifying enzyme [Bacillus cereus AH1272] gi|228736799|gb|EEL87347.1| Pre-ComX modifying enzyme [Bacillus cereus AH1272] Length = 251 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 34/197 (17%) Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS--VLVGDFLLSQAFCMVI--- 122 A +EFI L D++DD L G V L + N+ +LV +LL Q + Sbjct: 78 AMGVEFI----FLSADIIDD--LCDGDVLDPLYFKNEYPRFLLVSQYLLMQGLIYLTYKT 131 Query: 123 -ETKSQEALEALSLVACTLAEGELRQL----SLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 +T +++ L+ L C GE + + S+ K + ++EE+Y+ +I+ K+ +L Sbjct: 132 KDTATRDLLQQLIHSCC----GEWKDIQFCFSIDKKIILSEEEYMKLIEKKSGLL----- 182 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +I N + LK +GIA QL R + N+ + D ++ K LP Sbjct: 183 --TEIIFRTINPENRFLKEITSYIGIAGQL-------RNDANDAMTDNKNDLQDLKAYLP 233 Query: 238 VILAFQRGTKREKNFWK 254 + A++ K + NF K Sbjct: 234 FLKAYEYSCKTQDNFLK 250 >gi|17137582|ref|NP_477380.1| farnesyl pyrophosphate synthase [Drosophila melanogaster] gi|4689332|gb|AAD27853.1|AF132554_1 GM06581p [Drosophila melanogaster] gi|7303618|gb|AAF58670.1| farnesyl pyrophosphate synthase [Drosophila melanogaster] gi|17946048|gb|AAL49067.1| RE52884p [Drosophila melanogaster] gi|220942720|gb|ACL83903.1| Fpps-PA [synthetic construct] gi|220952876|gb|ACL88981.1| Fpps-PA [synthetic construct] Length = 419 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 24/247 (9%) Query: 24 CSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALML----EYRGDNHVL---LACAIEFIH 75 CSD + V++Y + GK+ R +LT+ T L + +N L L +E + Sbjct: 107 CSDAAKWFAQVLQYNV-PRGKKNRGILTVLTYKNLVPTQDLTPENIKLAQYLGWCVEMLQ 165 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-- 133 + ++ DDV+D+S RRG+ V N + D L+ + I K L+ Sbjct: 166 SFFIISDDVMDNSTTRRGQPCWHKV-ENVGLTAINDALMIENAMYAILKKHFSHLDCYVA 224 Query: 134 ------SLVACTLAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVL-FSAALEVSSLIAG 185 + T L QL+ ++ + + T E+Y ++++KTA F ++ +AG Sbjct: 225 LMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYYSFYLPFALALHLAG 284 Query: 186 VQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ + RQ+ K+ + +G FQ+ DD LD G GK IG D ++ K + ++A Q Sbjct: 285 YKDAEAFRQS-KTILLEMGNFFQVQDDFLDCFGNPEVTGK-IGTDIQDNKCSWLAVVAMQ 342 Query: 244 RGTKREK 250 R +K Sbjct: 343 RANVEQK 349 >gi|320163837|gb|EFW40736.1| geranyltranstransferase [Capsaspora owczarzaki ATCC 30864] Length = 347 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 30/197 (15%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTSVLVGDF 112 +L ++E++ L+ DD++D S RRG+ + V +L+ + Sbjct: 80 VLGWSVEWLQAFFLVADDMMDQSQTRRGQPCWYKKPEVSNIAINDSFVIEGSIYILLKKY 139 Query: 113 LLSQAFC-----MVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166 S+ + ++ E Q L + L L+ +L + +LSK Y ++K Sbjct: 140 FRSEPYYVDLLDLLHEVTFQTELGQMLDLITAPEDHVDLTRFTLSK--------YKTIVK 191 Query: 167 SKTAVL-FSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 KTAV F + ++ +AGV+N A S M +G FQ+ DD LD G+ +GK Sbjct: 192 YKTAVYSFYLPVAMAMHMAGVKNPAAFAAAHSILMEMGEFFQIQDDYLDCYGDPAVIGK- 250 Query: 225 IGEDFRNGKPTLPVILA 241 IG D ++ K + VI A Sbjct: 251 IGTDIQDNKCSWLVIQA 267 >gi|13022122|gb|AAK11650.1| unknown [Tolypothrix sp. PCC 7601] Length = 69 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%) Query: 152 KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDV 211 +N+D+T DY+H KT L ++ +L+ G ++V Q L Y ++G+AFQ+VD+V Sbjct: 4 ENIDITTLDYIHT--HKTGALLETSVLSGALLTGASDAVLQRLSVYAHHIGLAFQIVDNV 61 Query: 212 LD 213 LD Sbjct: 62 LD 63 >gi|83774491|dbj|BAE64614.1| unnamed protein product [Aspergillus oryzae] Length = 395 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 5/183 (2%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G ++ C+ H++ +L DD+ DDS+ RRG AA +++G +V + ++AF + Sbjct: 132 GSTEIIKTCSTILFHSSLML-DDIQDDSSKRRGMPAAHVMYGVGQTVNCVSYTGAKAFFL 190 Query: 121 VIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALE 178 E K+ A +AL L G+ +L + DY+ +I +KTA F L Sbjct: 191 CEELKNANACRKALYDELDNLFSGQALELHWKFHKTCPSMNDYIIMIDNKTAGFFRLVLR 250 Query: 179 VSSLIAGVQNSV--RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + + A V S+ + L + LG +Q+ DD + + K +D GK +L Sbjct: 251 MMAAEASVSMSLEKKNTLLHFITLLGRYYQIRDDYQNLVSDEYAAKKGFCDDLSEGKFSL 310 Query: 237 PVI 239 +I Sbjct: 311 ILI 313 >gi|296203641|ref|XP_002748996.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix jacchus] Length = 408 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 18/220 (8%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 147 VELLQAFFLVTDDIMDSSLTRRGQICWYQKPGVGLDAINDAVLLEACVYRLLKLYCREQP 206 Query: 131 EALSLVACTLA---EGELRQ-----LSLSKNLDV---TEEDYLHVIKSKTAVLFSAALEV 179 L+L+ L + E+ Q + N+D+ TE+ Y ++K KTA +S L V Sbjct: 207 YYLNLIELFLQSSYQTEIGQTPDFITAPQDNVDLDRFTEKRYKSIVKYKTA-FYSFYLPV 265 Query: 180 SS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++ +AG+ A + +G FQ+ DD LD G+ + GK +G D ++ K + Sbjct: 266 AAAMYMAGIDGEKEHANANEILLEMGEFFQIQDDYLDLFGDPSVTGK-VGTDIQDNKCSW 324 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T ++ K N G+ E + + + E Sbjct: 325 LVVQCLQRSTPEQRQILKE--NYGQKEAEKVARVKALYEE 362 >gi|302548937|ref|ZP_07301279.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] gi|302466555|gb|EFL29648.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] Length = 381 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 76/199 (38%), Gaps = 40/199 (20%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVA----------------ARLVWGNQTSVLVGDFL 113 A+E + T L+HDD++D + RRG+ A AR + G +VL GD Sbjct: 75 AVELLQTCALVHDDLMDAATTRRGRPALHTAVARQYGDIPRGAARRL-GEAAAVLAGDLA 133 Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173 L+ A ++ + A +R + + YL + T Sbjct: 134 LAWADDVMTDLLLDGDDLPPE------APARVRDIWRGTRTETIAGQYLDIQGQATGQPT 187 Query: 174 SA-ALEVSSLIAGVQNSVR----------------QALKSYGMNLGIAFQLVDDVLDYRG 216 A AL + L + + R QAL G G+AFQL DD+ D Sbjct: 188 PARALRAACLKSALYTVERPLALGAALAGAGQEATQALCRAGRCAGLAFQLRDDLDDLFA 247 Query: 217 EVNEMGKNIGEDFRNGKPT 235 + + GK G D R GKPT Sbjct: 248 DPDVTGKPSGGDVREGKPT 266 >gi|323702888|ref|ZP_08114546.1| hypothetical protein DesniDRAFT_1758 [Desulfotomaculum nigrificans DSM 574] gi|323532146|gb|EGB22027.1| hypothetical protein DesniDRAFT_1758 [Desulfotomaculum nigrificans DSM 574] Length = 255 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%) Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 +RP L L A + + L ++FI A+ +H + + + R G Q Sbjct: 46 IRPALVLTVARLYNCMSPKVISLGAIVQFIFMASQIHARIPETADNNRDPRD-----GTQ 100 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-- 162 VLVGD+L + F + + L L+ + L EG + LS + +TE + L Sbjct: 101 FPVLVGDYLFGKFFTTLCDNGIVHYLRPLAEIIGRLNEGGI--LSKTNPNAITENESLFE 158 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLV 208 ++K + A L + + ++ +AG + L +G++LG+ + L Sbjct: 159 EIVKLEVAELMAGSARLAGDLAGAPEEDKSLLHEFGLSLGMVYGLT 204 >gi|195333389|ref|XP_002033374.1| GM20447 [Drosophila sechellia] gi|194125344|gb|EDW47387.1| GM20447 [Drosophila sechellia] Length = 419 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 24/247 (9%) Query: 24 CSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALML----EYRGDNHVL---LACAIEFIH 75 CSD + V++Y + GK+ R +LT+ T L + +N L L +E + Sbjct: 107 CSDAAKWFAQVLQYNV-PRGKKNRGILTVLTYKNLVPAQDLTPENIKLAQYLGWCVEMLQ 165 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-- 133 + ++ DDV+D+S RRG+ V N + D L+ + I K L+ Sbjct: 166 SFFIISDDVMDNSTTRRGQPCWHKV-ENVGLTAINDALMIENAMYAILKKHFSHLDCYVA 224 Query: 134 ------SLVACTLAEGELRQLSLSKNL-DVTEEDYLHVIKSKTAVL-FSAALEVSSLIAG 185 + T L QL+ ++ + + T E+Y ++++KTA F ++ +AG Sbjct: 225 LMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYYSFYLPFALALHMAG 284 Query: 186 VQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ + RQ+ K+ + +G FQ+ DD LD G GK IG D ++ K + ++A Q Sbjct: 285 YKDAEAFRQS-KTILLEMGNFFQVQDDFLDCFGNPEVTGK-IGTDIQDNKCSWLAVVAMQ 342 Query: 244 RGTKREK 250 R +K Sbjct: 343 RANVEQK 349 >gi|332220681|ref|XP_003259483.1| PREDICTED: farnesyl pyrophosphate synthase [Nomascus leucogenys] Length = 419 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 158 VELVRGXLLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACVYRLLKLYCREQP 217 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 218 YYLNLIELFLQSS--YQTEIGQTLDLITAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLP 275 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 276 IAAAMYMAGIDGEKEHTNAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 334 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 335 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 373 >gi|328717612|ref|XP_001950423.2| PREDICTED: farnesyl pyrophosphate synthase-like [Acyrthosiphon pisum] Length = 396 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 33/250 (13%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD--------NHVLLACAIEFIHTAT 78 E + +++KY + GGK R + + + ML D +++L C +E + Sbjct: 84 TEWLENLLKYNV-PGGKNNRGLTLVTSFKMLSTPSDLTYENLRLSYILGWC-VEILQAYQ 141 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEA----- 129 L+ DD++D++ RRG R W + V D LL QA +++ ++ Sbjct: 142 LVLDDIMDNAITRRG----RPCWYRHNDIGLMAVNDGILLEQAIYQLLKKYFKDKPYYTH 197 Query: 130 -LEALSLVACTLAEGELRQLSLSKNLDVTE------EDYLHVIKSKTAVL-FSAALEVSS 181 +E V A G+ + +K+ T+ ++Y+ ++K KTA F + ++ Sbjct: 198 IVELFYDVTMKSAMGQCLDMLTAKSFKSTKLEKFTMDNYIAIVKYKTAYYSFFLPVFLAM 257 Query: 182 LIAGVQNS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + + + + K+ + +G FQ+ DD LD G GK IG D +GK + ++ Sbjct: 258 RMTNINDQEIFKQSKAILLEMGQFFQVQDDYLDCYGNPEVTGK-IGTDIEDGKCSWLAVV 316 Query: 241 AFQRGTKREK 250 A Q+ +K Sbjct: 317 ALQKVNSEQK 326 >gi|29124957|gb|AAO63552.1| putative farnesyl pyrophosphate synthase [Plasmodium falciparum] Length = 362 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 49/254 (19%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHV---------LLACAIEFIHTATLLHDDVVDDSALR 91 GGK R +L + L+ EY + + +A IE + + L+ DD++D R Sbjct: 59 GGKNNRGILVI---LIYEYVKNRDINCNEWEKVACIAWCIEILQASFLVADDIMDKGETR 115 Query: 92 RGKVAARLVWGNQTSVLVGD-FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-- 148 R K L+ + V D FLL A +++ + L L+ + E L+ + Sbjct: 116 RNKHCWYLLKDVEIKNAVNDVFLLYNAIYKLLDVYLRNDNCYLDLIT-SFREATLKTIVG 174 Query: 149 -------------SLSKNLDV-----TEED-----------YLHVIKSKTAVL-FSAALE 178 + K++DV ++E+ Y ++I KTA F + Sbjct: 175 QHLDTNIFSDKYSHIDKDIDVNNINISQENKININMLNFKVYQNIIIHKTAYYSFFLPIV 234 Query: 179 VSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G+ N + + +++ + +G FQ+ DD +D G+ + GK +G D +N K T Sbjct: 235 CGMQMGGISLDNLLYKKVENIAILMGEYFQVHDDYIDTFGDSKKTGK-VGSDIQNNKLTW 293 Query: 237 PVILAFQRGTKREK 250 P+I AF+ ++ EK Sbjct: 294 PLIKAFELCSQPEK 307 >gi|198436974|ref|XP_002128313.1| PREDICTED: similar to farnesyl pyrophosphate synthetase [Ciona intestinalis] Length = 348 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 21/247 (8%) Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH------VLLACAIEFIH 75 IC E I D+++Y GKR R + +A + G + + + A+E + Sbjct: 32 EICWSFERIKDLLEYNA-PHGKRTRGLTVVAAFKTIAGDGISEDEMKLALTMGWAVEILQ 90 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWG-NQTSVLVGDFLLSQAFCMVIETKSQEALEA-- 132 + L+ DD++D S RRG+ L +V G L + F ++ + +A A Sbjct: 91 ASFLVADDLMDQSKTRRGQACWYLNPNVGYQAVNDGMILETCVFTLIRQHCKGKAFYADI 150 Query: 133 ---LSLVACTLAEGELRQLSLSKNLDV-----TEEDYLHVIKSKTAVL-FSAALEVSSLI 183 V G+ + S+ V TE + +IK KTA F + ++ + Sbjct: 151 FDLFHKVILNTLMGQSLDMEASEQPTVDFTLFTETKHAAIIKYKTAFYSFYLPVAIAFYM 210 Query: 184 AGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AG+ + A +G FQ+ DD LD G+ GK IG D + K + +I A Sbjct: 211 AGINDEQCHTAACDILTKIGCLFQIQDDYLDCYGDPEVTGK-IGTDIEDNKCSWLIIKAI 269 Query: 243 QRGTKRE 249 Q T + Sbjct: 270 QLATPEQ 276 >gi|14625008|dbj|BAB61884.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum] Length = 147 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 18/148 (12%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV-- 136 HDD+ +DD LRRG + +G T++LVGD L + AF + + + + ++LV Sbjct: 1 HDDLPCMDDDVLRRGLPTVHVKFGEATAILVGDALQAHAF-LTLASLNAPGDSPIALVRE 59 Query: 137 ------ACTLAEGELRQLSL-SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 A A G+ LSL K++++ +H + K+ L A++ + +L A N+ Sbjct: 60 LAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMH--RMKSGALVRASVRMGALCAVGVNA 117 Query: 190 VRQ----ALKSYGMNLGIAFQLVDDVLD 213 AL Y G+A Q++DD+LD Sbjct: 118 AHAALYCALDHYSACFGLALQVIDDILD 145 >gi|317138018|ref|XP_001816605.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40] Length = 364 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 31/244 (12%) Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 LRP L ++ + +L + + ++L+ DD+ D S LRRG AA + +G Sbjct: 88 LRPWLNISDR--------SAAVLTDVMTMLQNSSLMLDDIEDGSQLRRGAPAAHVKYGLS 139 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC--TLAEGELRQLSLSKNLDV------ 156 ++ +++++ +V E ++ LE +++ LAE EL+ L+L + LD+ Sbjct: 140 QTINSTTYIIAK---VVSEVQTHLRLECAKVLSVLRKLAE-ELQTLTLGQALDLNWTFNK 195 Query: 157 ---TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD 213 + +YL +I KT F L + + A + L+ LG +Q+ DD + Sbjct: 196 TCPSVNEYLVMIDHKTGGFFRLMLRIMEIEANA--TPNDELRHLITLLGRYYQIRDDYQN 253 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQR----GTKREKNFWKSTINDGKISVENLKK 269 + K +D GK + P+I + T + + +++GK+S E K Sbjct: 254 IASDEYTTKKGFCDDLSEGKFSFPLIHLLEHSPNASTLHKMIYDGQPVDEGKMSEE--AK 311 Query: 270 AFII 273 ++II Sbjct: 312 SYII 315 >gi|258597332|ref|XP_001347966.2| farnesyl pyrophosphate synthase, putative [Plasmodium falciparum 3D7] gi|254832668|gb|AAN35879.2| farnesyl pyrophosphate synthase, putative [Plasmodium falciparum 3D7] Length = 376 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 49/254 (19%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHV---------LLACAIEFIHTATLLHDDVVDDSALR 91 GGK R +L + L+ EY + + +A IE + + L+ DD++D R Sbjct: 59 GGKNNRGILVI---LIYEYVKNRDINCNEWEKVACIAWCIEILQASFLVADDIMDKGETR 115 Query: 92 RGKVAARLVWGNQTSVLVGD-FLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL-- 148 R K L+ + V D FLL A +++ + L L+ + E L+ + Sbjct: 116 RNKHCWYLLKDVEIKNAVNDVFLLYNAIYKLLDVYLRNDNCYLDLIT-SFREATLKTIVG 174 Query: 149 -------------SLSKNLDV-----TEED-----------YLHVIKSKTAVL-FSAALE 178 + K++DV ++E+ Y ++I KTA F + Sbjct: 175 QHLDTNIFSDKYSHIDKDIDVNNINISQENKININMLNFKVYQNIIIHKTAYYSFFLPIV 234 Query: 179 VSSLIAGVQ--NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + G+ N + + +++ + +G FQ+ DD +D G+ + GK +G D +N K T Sbjct: 235 CGMQMGGISLDNLLYKKVENIAILMGEYFQVHDDYIDTFGDSKKTGK-VGSDIQNNKLTW 293 Query: 237 PVILAFQRGTKREK 250 P+I AF+ ++ EK Sbjct: 294 PLIKAFELCSQPEK 307 >gi|168031541|ref|XP_001768279.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680457|gb|EDQ66893.1| predicted protein [Physcomitrella patens subsp. patens] Length = 360 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 20/208 (9%) Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA--------------ARLVWGNQTSVL 108 N L IE++ L+ DD++D+S RRG+ ++ + + VL Sbjct: 91 NACALGWCIEWLQGYFLVMDDIMDNSVTRRGQPCWYRVPKVGLIAINDGIILRTHISRVL 150 Query: 109 VGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168 F S + +++ + + S L ++ LSK + T YL ++K K Sbjct: 151 KRHFRQSPIYVELVDLFNDVEYQTASGQMLDLITTPAGEVDLSKYVLPT---YLRIVKYK 207 Query: 169 TAVL-FSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 TA F + + L+AG + + +A K + +G FQ+ DD LD G +GK IG Sbjct: 208 TAYYSFYLPVACALLLAGETSVAKFEAAKEVLVQMGTYFQVQDDYLDCYGAPEVIGK-IG 266 Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWK 254 D + K + ++ A +R + +K K Sbjct: 267 TDIEDTKCSWLIVQALKRANESQKQLLK 294 >gi|322785241|gb|EFZ11944.1| hypothetical protein SINV_01791 [Solenopsis invicta] Length = 320 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 26/227 (11%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTSVLVGDF 112 +LA +E + L+ DD+ D S LRRG+ + ++ N L+ + Sbjct: 53 ILAWCVEVMQAFFLVIDDIQDGSLLRRGQPCWYRNNNIGLIAINDGIMLENSIYYLIQKY 112 Query: 113 LLSQAFCM-VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTA 170 + + + ++ET L+ L L L + NLD+ T Y +++ KTA Sbjct: 113 FKGKDYYVNLLETFHDTILKTLMGQCLDLLSTNLNK---KPNLDLFTINRYNSIVEYKTA 169 Query: 171 VLFSAALEVSSLI--AGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 +S L V++ + AG+++ +QA K+ + +G FQ+ DD LD G+ GK+ Sbjct: 170 Y-YSFILPVTAAMQSAGIKDPEMYKQA-KTILLEMGHLFQVQDDYLDCFGDTEVSGKD-N 226 Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS-VENLKKAFI 272 D + GK + VI+A QR T ++ + D + +K+ FI Sbjct: 227 TDIQEGKCSWLVIVALQRATPEQRKILEECYGDSDPEKTKRVKQLFI 273 >gi|157835943|pdb|2QIS|A Chain A, Crystal Structure Of Human Farnesyl Pyrophosphate Synthase T210s Mutant Bound To Risedronate Length = 374 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 113 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 172 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K K+A F Sbjct: 173 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKSAFYSFYLP 230 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 231 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 289 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 290 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 328 >gi|186704300|dbj|BAG30959.1| geranylgeranyl diphosphate synthase [Phomopsis amygdali] Length = 389 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 17/178 (9%) Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 H +L+ DDV D+S LRR + + ++G +V + + C ++E + + E + Sbjct: 131 HNLSLMQDDVEDNSPLRRSRPSTHSIFGIDQTV-------NSSTCGIVEVLRRSS-EMQN 182 Query: 135 LVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + ELR L + ++LD+ + E+YL ++ KT LF A ++ + Sbjct: 183 PAFLKIVIEELRSLLIGQSLDLLWTHQISTPSVEEYLQMVDGKTGGLFRMASKLMIAQSE 242 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 N L + LG FQ+ DD ++ + K ED GK +L +I A + Sbjct: 243 SSNMNPTDLDALMTLLGRYFQIRDDYMNLTSQEYTKSKGFCEDLDEGKYSLIMIHALE 300 >gi|227873691|ref|ZP_03991924.1| possible dimethylallyltranstransferase [Oribacterium sinus F0268] gi|227840459|gb|EEJ50856.1| possible dimethylallyltranstransferase [Oribacterium sinus F0268] Length = 161 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA------CAIEFIHTATLLHDDV- 84 + + Y + GGKR+RP+L L+ + L A+E IH+ +L HDD+ Sbjct: 60 EAMNYSLMVGGKRIRPILLREAFLLFAGEERQKLFLPLTEAFMLAMEMIHSFSLCHDDLP 119 Query: 85 -VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +D+ RRGK A + +L GD L AF V+E Sbjct: 120 AMDNDKYRRGKEATWYRFTEAQGILAGDSLSLYAFQWVLE 159 >gi|299115584|emb|CBN75787.1| Farnesyl pyrophosphate synthase [Ectocarpus siliculosus] Length = 499 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 15/199 (7%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL-SQAFCMVIET 124 +L +E++ L+ DDV+D S RRG+ V Q + F+L + F M+ Sbjct: 233 ILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKVPKVQEIAINDSFILEAHVFKMLKRH 292 Query: 125 KSQE--ALEALSLVACTLAEGELRQL--SLSKNLDV-------TEEDYLHVIKSKTAVL- 172 + E L+ + L E+ QL S+ +D T Y +++ KTA Sbjct: 293 FAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPSDLTRFTPVRYRMIVRYKTAYYT 352 Query: 173 FSAALEVSSLIAGVQNSVRQAL-KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 F + + AGV++ L + +G FQ+ DD LD G+ +GK +G D ++ Sbjct: 353 FYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGK-VGTDIQD 411 Query: 232 GKPTLPVILAFQRGTKREK 250 K + V+ A +R +K +K Sbjct: 412 NKCSWLVVQALERASKAQK 430 >gi|50302727|ref|XP_451300.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|1346032|sp|P49349|FPPS_KLULA RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|453166|emb|CAA53614.1| Farnesyldiphosphatesynthetase [Kluyveromyces lactis] gi|49640431|emb|CAH02888.1| KLLA0A06732p [Kluyveromyces lactis] gi|1092509|prf||2024223A farnesyl diphosphate synthase Length = 349 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD-FLLSQA-FCMVIE 123 +L IE + L+ DD++D S RRG+ V N + + D F+L A +C++ + Sbjct: 81 ILGWCIELLQAYFLVADDMMDQSITRRGQPCWYKV-ENVGDIAINDAFMLEGAIYCLLKK 139 Query: 124 TKSQEA--LEALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTAVL- 172 E ++ L L + EL QL + +D+++ E + ++ KTA Sbjct: 140 HFRTEPYYVDLLELFHDVTFQTELGQLLDLITAPEDKVDLSKFSLEKHSFIVIFKTAYYS 199 Query: 173 FSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 F A+ ++ AG+ +S ++QA + LG FQ+ DD LD G+ ++GK IG D + Sbjct: 200 FYLAVALAMFAAGITDSKDLKQA-SDVLIPLGEYFQIQDDFLDCFGKPEDIGK-IGTDIQ 257 Query: 231 NGKPTLPVILAFQRGTKREKN 251 + K + + +A + TK +++ Sbjct: 258 DNKCSWVINVALKNATKEQRD 278 >gi|115437522|ref|XP_001217832.1| farnesyl pyrophosphate synthetase 1 [Aspergillus terreus NIH2624] gi|114188647|gb|EAU30347.1| farnesyl pyrophosphate synthetase 1 [Aspergillus terreus NIH2624] Length = 347 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 24/204 (11%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMV 121 +L E + L+ DD++D S RRG+ W Q V + D F+L ++ Sbjct: 79 MLGWLTELLQAFFLVSDDIMDSSITRRGQPC----WYRQPGVGLIAINDAFMLESGIYLI 134 Query: 122 IET--KSQEA-LEALSLVACTLAEGELRQL-------SLSKNLD-VTEEDYLHVIKSKTA 170 ++ +S A ++ + L T + EL QL + NLD + E Y+ ++ KTA Sbjct: 135 LKKYFRSHPAYVDLIELFHETTWQTELGQLCDLITAPEDNVNLDNFSMEKYMFIVTYKTA 194 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYG---MNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 +S L V+ + +Q + Q L+ + LG FQ+ DD LD G+ +GK IG Sbjct: 195 Y-YSFYLPVALALHYLQLATPQNLQQAHDILIPLGQYFQVQDDYLDAYGDPAVIGK-IGT 252 Query: 228 DFRNGKPTLPVILAFQRGTKREKN 251 D ++ K + V A QR + ++ Sbjct: 253 DIQDNKCSWMVNQALQRCSAEQRQ 276 >gi|307166112|gb|EFN60361.1| Farnesyl pyrophosphate synthetase [Camponotus floridanus] Length = 379 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 108/260 (41%), Gaps = 42/260 (16%) Query: 25 SDVEMIPDVVKYLI------FSGGKRLRPMLTLATALMLEYRGDNHV--------LLACA 70 +V IPD+ K++ GGK+ R L L A L D +LA Sbjct: 58 PEVFEIPDISKWMAKVLQYNVPGGKKNRG-LALVYAYKLLVPNDQLTEENIRLARILAWC 116 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVIET-- 124 +E LL DD+ D S RR + W + V D LL A +I Sbjct: 117 VELAQAFFLLLDDIQDRSLFRRNQPC----WYRHNDIGLAAVNDGTLLENALYFLIRKHF 172 Query: 125 KSQEA----LEALSLVACTLAEGELRQLSLSKNLD-------VTEEDYLHVIKSKTAVL- 172 K +E LE + A G+ L LS N T + Y ++K K + Sbjct: 173 KGKECYIDILETFQHIILMTAMGQSLDL-LSTNFGKKPNLNLFTMDRYNSIVKYKCSYYT 231 Query: 173 FSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 F + V+ AG+++ +RQ K+ + +G FQ+ DD LD G+ +GK+ D + Sbjct: 232 FILPITVAMHFAGIKDPEMLRQT-KTILLEMGHFFQVQDDYLDCYGKREVIGKD-STDIQ 289 Query: 231 NGKPTLPVILAFQRGTKREK 250 GK T +++A QR T ++ Sbjct: 290 EGKCTWLIVVALQRATPEQR 309 >gi|170027724|ref|XP_001841747.1| farnesyl-pyrophosphate synthetase [Culex quinquefasciatus] gi|167862317|gb|EDS25700.1| farnesyl-pyrophosphate synthetase [Culex quinquefasciatus] Length = 380 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 14/202 (6%) Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI- 122 H L C IE + L+ DDV+D S RRG+ V + + + +L A V+ Sbjct: 116 HYLGWC-IEMFQSVFLICDDVMDGSQTRRGQPCWYKVDDVKLTAVNDALMLDAAIFHVLK 174 Query: 123 -----ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED---YLHVIKSKTAVL-F 173 E + +E + + G+ L +K LDVT+ Y ++ KTA F Sbjct: 175 KQFGDEPYYNKLVEMFNEIKFITTVGQSLDLQSAK-LDVTQYTMDLYKSIVSHKTAYYTF 233 Query: 174 SAALEVSSLIAGVQNS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + ++ + G + V + K+ + +G FQ DD LD G+ GK IG D G Sbjct: 234 YLPVALAMHMTGFNDPEVFRQTKTILLEIGRFFQAQDDFLDCFGDPAVTGK-IGTDIEEG 292 Query: 233 KPTLPVILAFQRGTKREKNFWK 254 K T ++ QR + +K+ K Sbjct: 293 KCTWLAVVCMQRASDEQKDIMK 314 >gi|242046572|ref|XP_002399925.1| hypothetical protein IscW_ISCW006431 [Ixodes scapularis] gi|215497592|gb|EEC07086.1| hypothetical protein IscW_ISCW006431 [Ixodes scapularis] Length = 304 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 17/142 (11%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A E H LH + R G+ +V GN+ +VLVGD L+ AF + + + Sbjct: 75 ASEMQHIMQALHSSTL---TTRGGEKEEDVVLGNKLAVLVGDLFLTLAFKEITDIQDSTV 131 Query: 130 LEALS----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 LE S L A EG R+ S+ D+ ++ F++A E S L+AG Sbjct: 132 LETFSKGVELFATPDFEGTPRRPSI---------DWWEKCSAEKHSWFASAFECSVLVAG 182 Query: 186 VQ-NSVRQALKSYGMNLGIAFQ 206 V+ + R+A + G NL + Q Sbjct: 183 VRCDDEREAARKCGRNLALTMQ 204 >gi|213026630|ref|ZP_03341077.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 162 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSA-- 89 + ++Y GGKRLRP L AT M A A+E IH +L+HDD+ Sbjct: 8 EAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDD 67 Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 LRRG + +G ++L GD L + AF ++ + E Sbjct: 68 LRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPE 106 >gi|241951352|ref|XP_002418398.1| dimethylallyltranstransferase, putative; farnesyl diphosphate synthetase, putative; farnesyl pyrophosphate synthetase, putative; geranyltranstransferase, putative [Candida dubliniensis CD36] gi|223641737|emb|CAX43698.1| dimethylallyltranstransferase, putative [Candida dubliniensis CD36] Length = 351 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 33/244 (13%) Query: 20 LKRICSDVEMIPDVVKYLIFS------GGKRLRPMLTLATALML-----------EYRGD 62 LK+I M + + + I S GGK R + + T +L EY+ Sbjct: 22 LKQILLSYNMPQEAIDWFIKSLNYNTPGGKLNRGLSVVDTYAILNNTTSDKLNDTEYK-- 79 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +L AIE + L+ DD++D S RRG+ LV G + F+L A +++ Sbjct: 80 KVAILGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLVEGVNNIAINDSFMLEGAIYILL 139 Query: 123 ETKSQE---ALEALSLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAA- 176 + ++ ++ L L + EL QL ++ + ++ + + + K V+F A Sbjct: 140 KNHFRQDPYYVDLLDLFHEVTFQTELGQLLDLITADEEIVDLNKFSLDKHSFIVIFKTAY 199 Query: 177 ------LEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 + ++ ++G+ N + +K + LG FQ+ DD LD G ++GK IG D Sbjct: 200 YSFYLPVVLAMYMSGINNEKDLKQVKDILIPLGEYFQIQDDFLDCFGTPEQIGK-IGTDI 258 Query: 230 RNGK 233 ++ K Sbjct: 259 KDNK 262 >gi|134082876|emb|CAK42706.1| unnamed protein product [Aspergillus niger] Length = 619 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 1/152 (0%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 +H A+L+ DD+ D S LRRG+ A V+G ++ +F+L QA V + L+ Sbjct: 447 LHNASLMLDDIEDGSPLRRGQPATHTVFGQALTINSANFVLIQAMDQVRLLEDSRCLDIF 506 Query: 134 SLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L G+ L ++ + +EE+YL +I+ KT LF + A + + Sbjct: 507 VEETRNLFIGQSFDLYWTRQDECPSEEEYLEMIRQKTGGLFRLLARLMMQKATSKKNRCL 566 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 L+ +G FQ+ DD + EV+ +N Sbjct: 567 PLEPLVDLMGEYFQIRDDYKNLAEEVSLPTQN 598 >gi|30795079|ref|NP_851529.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces rochei] gi|30698452|dbj|BAC76565.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces rochei] Length = 439 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 81/199 (40%), Gaps = 46/199 (23%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVA-----------------ARLVWGNQTSVLVGDFL 113 +E + T L+HDDV+D + LRRG+ AR +G +VL GD Sbjct: 139 LELLQTCALVHDDVMDRATLRRGRPTLHTELASGHEDRVGPERARR-FGQSAAVLAGDLA 197 Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL- 172 L+ A +V ET L++ + +R+L ++ YL + TA Sbjct: 198 LAWADDLVAETP-------LAVWKAVV----VRRLWSDMRTEMVAGQYLDLHGQATAARS 246 Query: 173 FSAALEVSSLIAGVQNSVRQA----------------LKSYGMNLGIAFQLVDDVLDYRG 216 + AL + L + + + R L G G+AFQL DD+ D G Sbjct: 247 LARALRAACLKSALYSVERPLALGAAVAGADDVTLRRLCDAGRCAGMAFQLRDDLDDVFG 306 Query: 217 EVNEMGKNIGEDFRNGKPT 235 + E GK G D R GK T Sbjct: 307 DPLETGKASGGDIREGKST 325 >gi|296085594|emb|CBI29369.3| unnamed protein product [Vitis vinifera] Length = 87 Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 30/47 (63%) Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 Y NLG+AFQL+D+VLD+ G +GK D RNG T P++ A + Sbjct: 6 YAKNLGLAFQLIDNVLDFTGTSASLGKGSLSDIRNGIITAPILFAIE 52 >gi|317506406|ref|ZP_07964211.1| hypothetical protein HMPREF9336_00581 [Segniliparus rugosus ATCC BAA-974] gi|316255286|gb|EFV14551.1| hypothetical protein HMPREF9336_00581 [Segniliparus rugosus ATCC BAA-974] Length = 130 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 31/54 (57%) Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + ++G +LGIAFQ VDDVL GE + GK G D R K +LP+ GT Sbjct: 1 MSAFGRHLGIAFQYVDDVLGIWGESAQTGKPRGSDVRARKLSLPIAYVLGLGTP 54 >gi|169831248|ref|YP_001717230.1| hypothetical protein Daud_1086 [Candidatus Desulforudis audaxviator MP104C] gi|169638092|gb|ACA59598.1| hypothetical protein Daud_1086 [Candidatus Desulforudis audaxviator MP104C] Length = 249 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 12/165 (7%) Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 LRP + L T + V LA ++ + + +H V D G RL Sbjct: 47 LRPAVVLLTGRLFNCVRAKLVALAAMVQLLFLSVRVHQQV--DEGGGPGNDRTRL----- 99 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164 +VL+GD+ L + F +V + L LS C + +G + ++ L T + Sbjct: 100 -AVLIGDYYLGRFFGLVGSSGLTGVLLPLSEAVCRIHDGAIARIHLCA----TPALVMDA 154 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 ++ +TA L + A ++ L R+ L YG NLG+ + L D Sbjct: 155 VRQETAELIAQACVIAGLEGDAPEGAREELFRYGYNLGMGYGLTD 199 >gi|238882238|gb|EEQ45876.1| farnesyl pyrophosphate synthetase [Candida albicans WO-1] Length = 351 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 41/248 (16%) Query: 20 LKRICSDVEMIPDVVKYLIFS------GGKRLRPMLTLATALML-----------EYRGD 62 LK+I M + +++ + S GGK R + + T +L EY+ Sbjct: 22 LKQILVSYNMPQEAIEWFVRSLNYNTPGGKLNRGLSVVDTFAILNNTTSDKLNDTEYK-- 79 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 LL AIE + L+ DD++D S RRG+ LV G + F+L A +++ Sbjct: 80 KVALLGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLVEGVNNIAINDSFMLEGAIYILL 139 Query: 123 ETKSQE---ALEALSLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAA- 176 + ++ ++ L L + EL QL ++ + ++ + D + K V+F A Sbjct: 140 KKHFRQDPYYVDLLDLFHEVTFQTELGQLLDLITADEEIVDLDKFSLEKHSFIVIFKTAY 199 Query: 177 ------LEVSSLIAGVQN-----SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 + ++ ++G+ + VR L + LG FQ+ DD LD G ++GK I Sbjct: 200 YSFYLPVALAMYMSGINDEKDLKQVRDIL----IPLGEYFQIQDDYLDCFGTPEQIGK-I 254 Query: 226 GEDFRNGK 233 G D ++ K Sbjct: 255 GTDIKDNK 262 >gi|68486364|ref|XP_712917.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314] gi|68486429|ref|XP_712885.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314] gi|46434304|gb|EAK93717.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314] gi|46434339|gb|EAK93751.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314] Length = 351 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 41/248 (16%) Query: 20 LKRICSDVEMIPDVVKYLIFS------GGKRLRPMLTLATALML-----------EYRGD 62 LK+I M + +++ + S GGK R + + T +L EY+ Sbjct: 22 LKQILVSYNMPQEAIEWFVRSLNYNTPGGKLNRGLSVVDTFAILNNTTSDKLNDTEYK-- 79 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 LL AIE + L+ DD++D S RRG+ LV G + F+L A +++ Sbjct: 80 KVALLGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLVEGVNNIAINDSFMLEGAIYILL 139 Query: 123 ETKSQE---ALEALSLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAA- 176 + ++ ++ L L + EL QL ++ + ++ + D + K V+F A Sbjct: 140 KKHFRQDPYYVDLLDLFHEVTFQTELGQLLDLITADEEIVDLDKFSLEKHSFIVIFKTAY 199 Query: 177 ------LEVSSLIAGVQN-----SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 + ++ ++G+ + VR L + LG FQ+ DD LD G ++GK I Sbjct: 200 YSFYLPVALAMYMSGINDEKDLKQVRDIL----IPLGEYFQIQDDYLDCFGTPEQIGK-I 254 Query: 226 GEDFRNGK 233 G D ++ K Sbjct: 255 GTDIKDNK 262 >gi|183448387|pdb|3CP6|A Chain A, Crystal Structure Of Human Farnesyl Diphosphate Synthase (T201a Mutant) Complexed With Mg And Biphosphonate Inhibitor Length = 376 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 115 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQP 174 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K K A F Sbjct: 175 YYLNLIELFLQSS--YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKAAFYSFYLP 232 Query: 177 LEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + +AG+ A K + +G FQ+ DD LD G+ + GK IG D ++ K + Sbjct: 233 IAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-IGTDIQDNKCS 291 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T + K N G+ E + + + E Sbjct: 292 WLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALYEE 330 >gi|157072593|gb|ABV08819.1| farnesyl diphosphate synthetase [Salvia miltiorrhiza] gi|315019238|gb|ADT70780.1| farnesyl pyrophosphate synthase [Salvia miltiorrhiza] Length = 349 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 43/272 (15%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQ 104 D+ V LA A +E++ L+ DD++D+S RRG+ + ++ N Sbjct: 76 DDEVFLASALGWCVEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAINDGIILRNH 135 Query: 105 TSVLVGDFLLSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTE 158 ++ ++ + + + E + Q A + + L+ E +L + SL Sbjct: 136 IPRILKKHFRTKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP------- 188 Query: 159 EDYLH--VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 LH +++ KTA F + + L+AG +K +N+GI FQ+ DD LD Sbjct: 189 ---LHRRIVQYKTAYYSFYLPVACALLMAGEDLEKHPTVKDVLINMGIYFQVQDDYLDCF 245 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND-GKISVENLKKAFIIM 274 GE ++GK IG D + K + V+ A + + +K K+ GK ++ K ++ Sbjct: 246 GEPEKIGK-IGTDIEDFKCSWLVVKALELCNEEQK---KTLFEHYGKEDPADVAKIKVLY 301 Query: 275 RE-NRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 E N V E+ + SY +K S+ P S Sbjct: 302 NEINLQGVFAEFESKSY-EKLNSSIEAHPSKS 332 >gi|325118365|emb|CBZ53916.1| hypothetical protein NCLIV_036980 [Neospora caninum Liverpool] Length = 465 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 4/138 (2%) Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS---KNLDVTEEDYLH 163 V V + + + +V S E + +S V +L +GEL Q +LS +NL+ YL Sbjct: 225 VHVAELIHTARNGIVAMCGSTEVMMRMSSVIESLVKGELIQ-ALSDPRQNLENALRMYLT 283 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 KTA L + + +++ G+ + +G +G+AFQL DD LD+ +GK Sbjct: 284 KTYHKTASLIAESCACLAILMGLPSRWVSWSADFGACVGMAFQLYDDELDFTASSANLGK 343 Query: 224 NIGEDFRNGKPTLPVILA 241 D R+G T P+++A Sbjct: 344 PTLSDLRSGVITAPLLMA 361 >gi|89574388|gb|ABD77411.1| geranylgeranyl diphosphate synthase [Zingiber officinale] Length = 112 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 40/71 (56%) Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 +F ++ + +++ G + + L+ Y ++G+ FQ+VDD+LD E+GK G+D + Sbjct: 1 VFRGSVVLGAIVGGASDDQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 60 Query: 232 GKPTLPVILAF 242 K T P +L Sbjct: 61 DKTTYPKLLGL 71 >gi|62752853|ref|NP_001015867.1| farnesyl diphosphate synthase [Xenopus (Silurana) tropicalis] gi|59861885|gb|AAH90384.1| MGC108224 protein [Xenopus (Silurana) tropicalis] gi|124504226|gb|AAI28626.1| MGC108224 protein [Xenopus (Silurana) tropicalis] Length = 348 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 70/291 (24%), Positives = 127/291 (43%), Gaps = 36/291 (12%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---E 58 ++++DLT +D + + + +V++Y GGK R + LA+ L E Sbjct: 18 QIVQDLTAEDSGH------PEVGDAITRLKEVLEYNT-PGGKCNRGVTVLASYKELVGPE 70 Query: 59 YRGDNHVLLACAI----EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 D ++ A A+ E + L+ DD++D+S RRG+ G + FLL Sbjct: 71 LHKDGNLQRALAVGWCVELLQAFFLVADDIMDNSVTRRGQPCWYRKEGVGLDAVNDSFLL 130 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-------------TEEDY 161 + ++ + LSL+ L Q L + LD+ TE+ Y Sbjct: 131 EASIYRILRKYCRGKPYYLSLLELFLETS--YQTELGQALDLITAQPGKVDLNRYTEKRY 188 Query: 162 LHVIKSKTAVLFSAALEVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEV 218 ++K KTA +S L V++ +AG+ ++ + +G FQ+ DD LD G+ Sbjct: 189 KAIVKYKTA-FYSFYLPVAAAMYMAGIAGEAEHTNARTILLEMGEFFQIQDDYLDCYGDP 247 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 + GK IG D ++ K V+ A +R + ++ + N G+ E +++ Sbjct: 248 SVTGK-IGTDIQDNKCGWLVVEALKRVSPEQRRLLQE--NYGREEPERVQR 295 >gi|168703799|ref|ZP_02736076.1| geranyltranstransferase [Gemmata obscuriglobus UQM 2246] Length = 129 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 11/124 (8%) Query: 164 VIKSKTAVLFSAALEVSSLIAGVQ---NSVRQALKS---YGMNLGIAFQLVDDVLDYRGE 217 + + KT LF ++L + A + + +ALK+ Y G+AFQ+ DD+LD Sbjct: 7 IHRRKTGALFRSSLRLGVFAAQAERPAGACPEALKAADDYADAFGLAFQVTDDLLDVEST 66 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFII 273 ++ GK +G+D GK T P +L + +R + + G + +L + +++ Sbjct: 67 ADKAGKRVGKDAARGKLTYPGLLGVEASRRRAAELGQLAVAAAERLGSEPLADLAR-YVV 125 Query: 274 MREN 277 RE Sbjct: 126 TREK 129 >gi|302781879|ref|XP_002972713.1| hypothetical protein SELMODRAFT_173042 [Selaginella moellendorffii] gi|300159314|gb|EFJ25934.1| hypothetical protein SELMODRAFT_173042 [Selaginella moellendorffii] Length = 363 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 30/274 (10%) Query: 40 SGGKRLRPMLTLATALML---EYRGDNHVLLACA----IEFIHTATLLHDDVVDDSALRR 92 GGK R + + + ++L E ++ + LA A IE++ L+ DD++DDS RR Sbjct: 64 PGGKLNRGLSVVDSLVLLRSGEELSEDELFLAFALGWCIEWLQAYFLVLDDIMDDSHTRR 123 Query: 93 GKVAARLVWGNQTSV---LVGDFLLSQAFCMVIETKS-------QEALEALSLVACTLAE 142 G+ W Q V D +L + I T+ Q+ E V A Sbjct: 124 GQPC----WFRQPKVGLIAANDGILLRNHISRILTRHFHDKPYYQDLRELFDEVEYQTAC 179 Query: 143 GELRQL--SLSKNLDVTE---EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVR-QALK 195 G++ L + +D+++ + YL ++K KTA F + + ++G + + ++ + Sbjct: 180 GQMLDLITTPPGEVDLSKYVMDTYLRIVKYKTAYYSFYLPVACALYMSGEDDKSKFESAE 239 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN-FWK 254 + +G FQ+ DD LD G + +GK +G D + K + ++ A R +K+ + Sbjct: 240 RILVQMGTYFQIQDDYLDCYGHPDVIGK-VGTDIEDTKCSWLIVQAIARAIPEQKSRLYN 298 Query: 255 STINDGKISVENLKKAFIIMRENRALVDTEYRAY 288 + V +KK + + + +D E +Y Sbjct: 299 NYGRKDPACVAEVKKVYNELNLEKLFLDYESESY 332 >gi|241768108|ref|ZP_04765590.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN] gi|241360555|gb|EER57605.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN] Length = 172 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 21/116 (18%) Query: 32 DVVKYLIFSGGKRLRPMLTLAT--------------ALMLEYRGDNH---VLLACAIEFI 74 + ++Y + GGKRLRP+L LA R + ACA+E I Sbjct: 42 EAMRYAVLDGGKRLRPLLVLAAFEAVHGEAVAAGAADGNAALRAGMQAAALRAACAVELI 101 Query: 75 HTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 H +L+HDD+ +D+ LRRGK + +G ++L GD L QAF + T E Sbjct: 102 HAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEAQALLAGDAL--QAFAFELLTPEDE 155 >gi|119174214|ref|XP_001239468.1| hypothetical protein CIMG_09089 [Coccidioides immitis RS] Length = 643 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 16/230 (6%) Query: 18 LILKRICSDVEMIPDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIH 75 L L + DV + P +YL + S G R + + +L T L + + ++ ++ +H Sbjct: 419 LNLPELSDDVVLQP--YRYLTSLPSKGFRDQAIDSLNTWLKVPQKSAK--MIKSIVKMLH 474 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL 135 +A+L+ DD+ DDS LRRG+ + ++G ++ + +A M E + L Sbjct: 475 SASLMLDDIEDDSPLRRGRPSTHNIYGTAQTINSATYQYVKATGMATELGNPSCLRIFIE 534 Query: 136 VACTLAEGELRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L G+ L + N L + +YL ++ KT LF + ++A ++ V + + Sbjct: 535 EMQQLHVGQSYDLYWTHNTLCPSVSEYLKMVDMKTGGLFRMLTRL--MVA--ESPVGEKV 590 Query: 195 KSYGMNL-----GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +NL G FQ+ DD + K ED GK + +I Sbjct: 591 SDDALNLLSCLVGRFFQIRDDYQNLASADYAKQKGFAEDLDEGKLSFTLI 640 >gi|330918492|ref|XP_003298243.1| hypothetical protein PTT_08883 [Pyrenophora teres f. teres 0-1] gi|311328676|gb|EFQ93661.1| hypothetical protein PTT_08883 [Pyrenophora teres f. teres 0-1] Length = 723 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 27/191 (14%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 + +A+L+ DD+ D S+LRR A V+G ++ G C I QE + L Sbjct: 468 LQSASLMLDDIEDGSSLRRSHPATHTVFGTAQTINSG--------CWEILNAVQET-QQL 518 Query: 134 SLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIA 184 A + EL +L + ++ D+ +E++YL ++ KT LF L V L+ Sbjct: 519 GPEAVKIVLEELSELHIGQSYDLYWTQHSCCPSEDEYLEMVSKKTGGLFR--LIVRLLLD 576 Query: 185 GVQNSVRQALKSYGMN-----LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 G ++ + M +GI +Q+ DD + + K +D GK + P++ Sbjct: 577 GSESKAPKGHLHTDMGHLASLIGIQYQIRDDYQNLYCPDYGVQKGFCQDLDEGKFSFPLL 636 Query: 240 --LAFQRGTKR 248 L+ Q +K+ Sbjct: 637 HALSVQPSSKK 647 >gi|157831115|pdb|1FPS|A Chain A, Crystal Structure Of Recombinant Farnesyl Diphosphate Synthase At 2.6 Angstroms Resolution Length = 348 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 25/251 (9%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHV-LLACA------IEFIHTATLLHDDVVDDSALRR 92 GGK R + +A L G L CA IE L+ DD++D S RR Sbjct: 49 PGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELFQAFFLVADDIMDQSLTRR 108 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAEGELRQL- 148 G++ G + FLL + V++ ++ + L L T + EL Q+ Sbjct: 109 GQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVHLLELFLQTAYQTELGQML 168 Query: 149 ----SLSKNLDV---TEEDYLHVIKSKTAVLFSAALEVSSLIAGV---QNSVRQALKSYG 198 + +D+ +EE Y ++K KTA +S L V++ + V + K+ Sbjct: 169 DLITAPVSKVDLSHFSEERYKAIVKYKTA-FYSFYLPVAAAMYMVGIDSKEEHENAKAIL 227 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + +G FQ+ DD LD G+ GK +G D ++ K + V+ QR T ++ + N Sbjct: 228 LEMGEYFQIQDDYLDCFGDPALTGK-VGTDIQDNKCSWLVVQCLQRVTPEQRQLLED--N 284 Query: 259 DGKISVENLKK 269 G+ E + K Sbjct: 285 YGRKEPEKVAK 295 >gi|328870615|gb|EGG18988.1| putative protein serine/threonine kinase [Dictyostelium fasciculatum] Length = 1550 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 31/281 (11%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW-------GNQTSVLVGDFLLSQAF 118 +L IE++ L+ DD++D S RRG W + LVG+ ++ +F Sbjct: 112 VLGWCIEWLQAFFLVSDDIMDQSITRRGAPC----WYRTNNPISKDQNALVGNIAINDSF 167 Query: 119 ----CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED------------YL 162 C+ I K EA L Q L + LD+T + Y Sbjct: 168 ILESCIYILIKKYFRNEAYYADVMDLFHEVTYQTELGQLLDLTTQPNRGDFSLFQLDTYN 227 Query: 163 HVIKSKTAVL-FSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 ++K KT+ F + ++ L+AG+ + + + +G FQ+ DD LD G+ + Sbjct: 228 RIVKYKTSYYSFYLPVALAMLMAGITSKPAFDTAQDILLPMGEYFQIQDDYLDCYGDPSV 287 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-DGKISVENLKKAFIIMRENRA 279 +GK IG D K + A GT + + K D K V +KK + + + Sbjct: 288 IGK-IGRDIEENKCCWLICQAILHGTPAQIDALKKHYGRDSKEDVSIVKKIYADIDIQKI 346 Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 E +Y Y K ++R +P + K L ++ L+R Sbjct: 347 FRKYEDESYQYLIKKIKNVRIMPQEVFLKLLSKIYKRELER 387 >gi|331236250|ref|XP_003330784.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309309774|gb|EFP86365.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 403 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 30/208 (14%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL + GK +R M+ A L + ++ + +HTA+LL DDV D S LRRG Sbjct: 141 YLTSTPGKEIRSMMIDAFNHWLSVPTEQLNIVKRIVGLLHTASLLMDDVEDGSELRRGIP 200 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A ++G ++ +++ LA EL L S++ Sbjct: 201 VAHKIYGIPQTINSANYVY------------------------FLAYQELSMLHPSQDSS 236 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 + L + ++T LF A+++ ++ +Q + + + +GI FQ+ DD+L+ Sbjct: 237 ASN---LWKLINETGGLFRIAIKLMMAMSPLQQ-IPDYVPLVDL-IGIIFQIRDDLLNLS 291 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + + K ED GK + P++ A + Sbjct: 292 SDYT-VNKGFCEDLTEGKFSFPIVHAIR 318 >gi|282158091|ref|NP_001164089.1| farnesyl pyrophosphate synthase [Tribolium castaneum] Length = 425 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 51/259 (19%) Query: 30 IPDVVK------YLIFSGGKRLRPMLTLATALMLEYRGDNHV--------LLACAIEFIH 75 IP+V K + GK+ R + +A MLE + +N ++ +E + Sbjct: 110 IPEVTKRYAKALHYNVPNGKKNRGLAVIAAYKMLE-KEENLTPENIRLANIMGWCVELLQ 168 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDF----------------LLSQAFC 119 L+ DD++D S +RRG W + + F SQ C Sbjct: 169 GFFLVTDDIIDRSEMRRGMPC----WYKKDDTGLNAFNDAILLEHGIYTLLKRHFSQHHC 224 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSK----NLDV-TEEDYLHVIKSKTAVL-F 173 V +E V + G+ +K NL++ T Y ++K KTA F Sbjct: 225 YV------PTMELFHDVTLKTSMGQALDCLCNKDGKPNLELFTMNKYNSIVKYKTAYYTF 278 Query: 174 SAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + ++ +A + + RQA K+ M +G+ FQ+ DD LD G+ GK G D R Sbjct: 279 QLPVALAMYMANLYDPEMHRQA-KTILMEMGLFFQIQDDFLDCFGDPEVTGKK-GNDIRE 336 Query: 232 GKPTLPVILAFQRGTKREK 250 GK + ++A QR ++ Sbjct: 337 GKCSWLAVVALQRANPTQR 355 >gi|14488053|gb|AAK63847.1|AF384040_1 farnesyl diphosphate synthase [Mentha x piperita] Length = 349 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 63/271 (23%), Positives = 116/271 (42%), Gaps = 41/271 (15%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQ 104 D+ V LA A IE++ L+ DD++D+S RRG+ + ++ N Sbjct: 76 DDEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFKVPKVGMIAINDGIILRNH 135 Query: 105 TSVLVGDFLLSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTE 158 ++ S+ + + + E + Q A + + L+ E +L + SL Sbjct: 136 IPRILKKHFRSKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP------- 188 Query: 159 EDYLH--VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 LH +++ KTA F + + L+AG +K +++GI FQ+ DD LD Sbjct: 189 ---LHRRIVQYKTAYYSFYLPVACALLMAGENLENHPTVKDVLIDMGIYFQVQDDYLDCF 245 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQR-GTKREKNFWKSTINDGKISVENLKKAFIIM 274 GE ++GK IG D + K + V+ A + +++K ++ + V +K + + Sbjct: 246 GEPEKIGK-IGTDIEDFKCSWLVVKALELCNEEQKKTLFEHYGKENPADVAKIKALYNDI 304 Query: 275 RENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 D E ++Y +K S+ P S Sbjct: 305 NLQGMFADFESKSY---EKITSSIEAHPSKS 332 >gi|71026636|ref|XP_762981.1| farnesyl pyrophosphate synthetase [Theileria parva strain Muguga] gi|68349933|gb|EAN30698.1| farnesyl pyrophosphate synthetase, putative [Theileria parva] Length = 353 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 37/231 (16%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIET 124 ++ +E + T+ L+ DD++D S RR LV + D FL + + ++ +T Sbjct: 90 MSWCVELLQTSFLVADDIIDKSLKRRSNTCWYLVPTIGVENAINDVMFLYTLIYRILFKT 149 Query: 125 KSQ-----EALEALSLVACTLAEGELRQLSLSKNLDVTEED--------------YLHVI 165 E +E + ++ T G+ +LD+ E + + + Sbjct: 150 LKDTKNFLEIVETFNRISMTTILGQ--------HLDIYESNTNRLFQDSNEATKLFAEIC 201 Query: 166 KSKTAVL-FSAALEVSSLIAGVQ--NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 K+KT+ F L++ +++GV+ N ++S + +G FQ DD LD G+ + G Sbjct: 202 KNKTSYYSFFLPLKLGMVLSGVELSNLFYSKVESISVLIGTLFQAQDDYLDCYGDPEDFG 261 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI---NDGKI-SVENLKK 269 KN G D + K + + A + +KN K I +D K+ +V+N+ K Sbjct: 262 KN-GTDIQTKKCSWLLCQALNIASDEQKNLIKENIGHNDDSKVEAVKNVYK 311 >gi|255724742|ref|XP_002547300.1| farnesyl pyrophosphate synthetase [Candida tropicalis MYA-3404] gi|240135191|gb|EER34745.1| farnesyl pyrophosphate synthetase [Candida tropicalis MYA-3404] Length = 351 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 22/202 (10%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LL AIE + L+ DD++D S RRG+ LV G + F+L A ++++ Sbjct: 83 LLGWAIELLQAYFLVADDMMDQSKTRRGQKCWYLVEGVGNIAINDSFMLEGAIYVLLKKH 142 Query: 126 SQE---ALEALSLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAA---- 176 ++ ++ L L + EL QL ++ + +V + D + K V+F A Sbjct: 143 FRQDPYYVDLLDLFHEVTFQTELGQLLDLVTADEEVVDLDKFSLDKHSFIVIFKTAYYSF 202 Query: 177 ---LEVSSLIAGVQN-----SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 + ++ ++G+ + VR L + LG FQ+ DD LD G ++GK IG D Sbjct: 203 YLPVALAMYMSGINSEEDLKQVRDIL----IPLGEYFQIQDDFLDCFGTPEQIGK-IGTD 257 Query: 229 FRNGKPTLPVILAFQRGTKREK 250 ++ K + V A T ++ Sbjct: 258 IKDNKCSWVVNQALLHATPEQR 279 >gi|285808231|gb|ADC35765.1| hypothetical protein [uncultured bacterium 293] Length = 107 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/39 (48%), Positives = 29/39 (74%) Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 A+K+Y NLG+AFQ+VDD++D G E GK++G+D + Sbjct: 20 AVKAYAKNLGLAFQIVDDLIDAVGRSGEAGKDVGQDLKK 58 >gi|255955563|ref|XP_002568534.1| Pc21g15240 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590245|emb|CAP96421.1| Pc21g15240 [Penicillium chrysogenum Wisconsin 54-1255] Length = 347 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 16/200 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET- 124 +L E + L+ DD++D S RRG+ G + F+L ++++ Sbjct: 79 ILGWMTELLQAFFLVSDDMMDSSITRRGQPCWYRHEGVGLIAINDAFMLEAGIYLILKQR 138 Query: 125 -KSQEA-LEALSLVACTLAEGELRQL-------SLSKNLD-VTEEDYLHVIKSKTAVLFS 174 +S A ++ + L T + EL QL + NLD + E Y+ ++ KTA +S Sbjct: 139 FRSHPAYIDMVELFHETTWQTELGQLCDLITAPEDNVNLDNFSMEKYMFIVTYKTAY-YS 197 Query: 175 AALEVSSLIAGVQNSVRQALKSYG---MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L V+ + +Q + + LK + LG FQ+ DD LD G+ +GK IG D ++ Sbjct: 198 FYLPVALALMYLQLATEENLKQAHDILIPLGQYFQIQDDYLDNFGDPAFIGK-IGTDIQD 256 Query: 232 GKPTLPVILAFQRGTKREKN 251 K + V A QR T ++ Sbjct: 257 NKCSWLVNQAIQRCTPEQRQ 276 >gi|147901253|ref|NP_001084626.1| hypothetical protein LOC414582 [Xenopus laevis] gi|46249832|gb|AAH68912.1| MGC83119 protein [Xenopus laevis] Length = 348 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 27/234 (11%) Query: 41 GGKRLRPMLTLATALML---EYRGDNHVLLACAI----EFIHTATLLHDDVVDDSALRRG 93 GGK R + LA+ L E D ++ A A+ E + L+ DD++D+S RRG Sbjct: 50 GGKCNRGVTVLASYRELLGPELHKDGNLQRALAVGWCVELLQAFFLVADDIMDNSVTRRG 109 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN 153 + G + FLL ++ + LSL+ L Q L + Sbjct: 110 QPCWYRKEGIGLDAVNDSFLLEACIYRILRKYCRGKPYYLSLLELFLETS--YQTELGQA 167 Query: 154 LDV-------------TEEDYLHVIKSKTAVLFSAALEVSS--LIAGVQNSVRQA-LKSY 197 LD+ TE+ Y ++K KTA +S L V++ +AG+ K+ Sbjct: 168 LDLITAQPGKVDLNRYTEKRYKAIVKYKTA-FYSFYLPVAAAMYMAGIDGEEEHKNAKTI 226 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + +G FQ+ DD LD G+ + GK IG D ++ K V+ A +R + ++ Sbjct: 227 LLEMGEFFQIQDDYLDCYGDPSVTGK-IGTDIQDNKCGWLVVEALKRVSPEQRQ 279 >gi|3915686|sp|P08836|FPPS_CHICK RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase Length = 367 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 25/251 (9%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHV-LLACA------IEFIHTATLLHDDVVDDSALRR 92 GGK R + +A L G L CA IE L+ DD++D S RR Sbjct: 68 PGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELFQAFFLVADDIMDQSLTRR 127 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE---ALEALSLVACTLAEGELRQL- 148 G++ G + FLL + V++ ++ + L L T + EL Q+ Sbjct: 128 GQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVHLLELFLQTAYQTELGQML 187 Query: 149 ----SLSKNLDV---TEEDYLHVIKSKTAVLFSAALEVSSLIAGV---QNSVRQALKSYG 198 + +D+ +EE Y ++K KTA +S L V++ + V + K+ Sbjct: 188 DLITAPVSKVDLSHFSEERYKAIVKYKTA-FYSFYLPVAAAMYMVGIDSKEEHENAKAIL 246 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 + +G FQ+ DD LD G+ GK +G D ++ K + V+ QR T ++ + N Sbjct: 247 LEMGEYFQIQDDYLDCFGDPALTGK-VGTDIQDNKCSWLVVQCLQRVTPEQRQLLED--N 303 Query: 259 DGKISVENLKK 269 G+ E + K Sbjct: 304 YGRKEPEKVAK 314 >gi|83764459|dbj|BAE54603.1| unnamed protein product [Aspergillus oryzae] Length = 358 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 33/242 (13%) Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 LRP L ++ + +L + + ++L+ DD+ D S LRRG AA + +G Sbjct: 88 LRPWLNISDR--------SAAVLTDVMTMLQNSSLMLDDIEDGSQLRRGAPAAHVKYGLS 139 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-------- 156 ++ +++++ +V E ++ LE A L+E EL+ L+L + LD+ Sbjct: 140 QTINSTTYIIAK---VVSEVQTHLRLEC----AKVLSE-ELQTLTLGQALDLNWTFNKTC 191 Query: 157 -TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 + +YL +I KT F L + + A + L+ LG +Q+ DD + Sbjct: 192 PSVNEYLVMIDHKTGGFFRLMLRIMEIEANA--TPNDELRHLITLLGRYYQIRDDYQNIA 249 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQR----GTKREKNFWKSTINDGKISVENLKKAF 271 + K +D GK + P+I + T + + +++GK+S E K++ Sbjct: 250 SDEYTTKKGFCDDLSEGKFSFPLIHLLEHSPNASTLHKMIYDGQPVDEGKMSEE--AKSY 307 Query: 272 II 273 II Sbjct: 308 II 309 >gi|145233581|ref|XP_001400163.1| geranyltranstransferase [Aspergillus niger CBS 513.88] gi|134057095|emb|CAK44383.1| unnamed protein product [Aspergillus niger] Length = 346 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 16/199 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET- 124 LL E + L+ DD++D S RRG+ G + FLL ++++ Sbjct: 78 LLGWLTELLQAFFLVSDDIMDGSITRRGQPCWYKHEGVGLIAINDAFLLESGIYIILKKY 137 Query: 125 -KSQEA-LEALSLVACTLAEGELRQL-------SLSKNLD-VTEEDYLHVIKSKTA---V 171 +S A ++ + L T + EL QL + NLD + E Y+ ++ KTA Sbjct: 138 FRSHPAYIDLVELFHETTYQTELGQLCDLITAPEDNVNLDNFSMEKYMFIVTYKTAYYSF 197 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 AL + L ++RQA + LG FQ+ DD LD G+ +GK IG D ++ Sbjct: 198 YLPVALALHYLQLATPENLRQA-HDILIPLGQYFQVQDDYLDAYGDPAFIGK-IGTDIQD 255 Query: 232 GKPTLPVILAFQRGTKREK 250 K + V A QR ++ Sbjct: 256 NKCSWLVNQALQRCNAEQR 274 >gi|312078710|ref|XP_003141856.1| polyprenyl synthetase [Loa loa] gi|307762977|gb|EFO22211.1| polyprenyl synthetase [Loa loa] Length = 346 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 24/210 (11%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGK R +L + L + D + A +E + + L+ DDV+D+ RRGK Sbjct: 58 GGKYKRSILLVTAYKALGGKQDEEQMKMITNTAACLELLQSFFLIEDDVMDEGVNRRGKP 117 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL- 154 + G + + LL CMV T + A A A E R++++ + Sbjct: 118 CWHRLEGIGMNGINDGLLLD---CMVSYTLRSNRIPA----AVRDAFDEARRVTVLGQIL 170 Query: 155 --------DVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 D T + + + + KT+ + L++++L + Q + + LK LG F Sbjct: 171 DSDTKGVEDCTWQRHRTITQHKTSHYTYFTPLQIAAL-STAQPLIIEPLKRIAYQLGYLF 229 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 Q DD +D G+ + MGK +G D R K T Sbjct: 230 QSKDDYMDCFGDKSIMGK-VGNDLRGAKCT 258 >gi|63145969|gb|AAY33921.1| GGDP synthase [Xanthophyllomyces dendrorhous] gi|63145971|gb|AAY33922.1| GGDP synthase [Xanthophyllomyces dendrorhous] Length = 376 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 45/83 (54%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL + GK +R L A L+ + ++ ++ + +HTA+LL DDV D S LRRG Sbjct: 28 YLGKNPGKEIRSQLIEAFNYWLDVKKEDLEVIQNVVGMLHTASLLMDDVEDSSVLRRGSP 87 Query: 96 AARLVWGNQTSVLVGDFLLSQAF 118 A L++G ++ +++ A+ Sbjct: 88 VAHLIYGIPQTINTANYVYFLAY 110 >gi|66815945|ref|XP_641989.1| hypothetical protein DDB_G0278823 [Dictyostelium discoideum AX4] gi|74856499|sp|Q54XP1|Y8823_DICDI RecName: Full=Probable farnesyl diphosphate synthase DDB_G0278823; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|60470032|gb|EAL68013.1| hypothetical protein DDB_G0278823 [Dictyostelium discoideum AX4] Length = 356 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 109/269 (40%), Gaps = 25/269 (9%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF----CMVI 122 L +E L+ DD++D S RRGK + VG ++ +F C+ I Sbjct: 86 LGWCVEIFQACYLVSDDIMDQSLKRRGKPCWYKQKRPNSDQEVGLAAINDSFIIESCVFI 145 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE------------DYLHVIKSKTA 170 + E+ L L Q L + LD+T + ++ + + KTA Sbjct: 146 LLEKYFKNESYYLNIVELFHKTGFQTQLGQLLDLTTQPIRGDFSSINLKNHTRITEYKTA 205 Query: 171 VL-FSAALEVSSLIAGVQNSVRQAL---KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 F + ++ L++ + + QA K + +G+ FQ+ DD LD G GK IG Sbjct: 206 YYSFFFPVALAMLMSKINH--EQAFTTAKDILLPMGVYFQVQDDFLDCYGSPEVFGK-IG 262 Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-DGKISVENLKKAFIIMRENRALVDTEY 285 D K + + A GT + N K D VE +KK + + + D E Sbjct: 263 RDIEENKCSWMICQAILNGTPDQINLLKKHYGFDNPTDVEIVKKIYKEINLEKIFKDYEN 322 Query: 286 RAYSY-GQKAKDSLRCLPDSSWKKSLMEV 313 +Y++ K K + LP S + K L ++ Sbjct: 323 TSYNFLIDKIKTTCIYLPPSVFLKILSKI 351 >gi|73654128|gb|AAZ79359.1| farnesyl diphosphate synthase [Citromicrobium sp. JL-364] Length = 146 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 12/134 (8%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-QEALEALSLVACTLAEGELRQL 148 LRRG+ + + T++L GD L + AF + E E + + + A G + Sbjct: 13 LRRGRPTTHIAFDEATAILAGDALQALAFGWLAEAPGLPEPVRLIMVRELARASGHGGMV 72 Query: 149 --------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA-GVQNSVRQALKSYGM 199 S+ KNL + + + +H + KT L ++ + +L A V +L Y Sbjct: 73 GGQAIDLESVGKNLALAQLETMH--RHKTGALIETSVRIGALTAPSVSEQALASLTEYAK 130 Query: 200 NLGIAFQLVDDVLD 213 LG+AFQ+ DD+LD Sbjct: 131 ALGLAFQVQDDILD 144 >gi|414611|emb|CAA53433.1| dimethylallyltransferase [Arabidopsis thaliana] Length = 343 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 39/278 (14%) Query: 41 GGKRLRPMLTLATALMLEYRGD---NHVLLACA----IEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + +L+ D V L+CA IE++ L+ DD++D+S RRG Sbjct: 46 GGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRG 105 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV----------AC----- 138 + V + LL +++ ++ + LV AC Sbjct: 106 QPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMID 165 Query: 139 --TLAEGE--LRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQA 193 T EGE L + SLS + +++ KTA F + + L+AG Sbjct: 166 LITTFEGEKDLSKYSLSI--------HRRIVQHKTAYYSFYLPVACALLMAGENLENHID 217 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 +K+ +++GI FQ+ DD LD + +GK IG D + K + V+ A +R ++ + Sbjct: 218 VKNVLVDMGIYFQVQDDYLDCFADPETLGK-IGTDIEDFKCSWLVVKALERCSEEQTKIL 276 Query: 254 KSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSY 290 N GK N+ K + +E + V EY + SY Sbjct: 277 YE--NYGKTDPSNVAKVKDLYKELDLEGVFMEYESKSY 312 >gi|240171554|ref|ZP_04750213.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium kansasii ATCC 12478] Length = 370 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 78/191 (40%), Gaps = 22/191 (11%) Query: 75 HTATLLHDDVVDDSALRRGKVAARLV---W-------------GNQTSVLVGDFLLSQAF 118 H LL DDV+D S+ RRG A + W G ++L+GD L A Sbjct: 100 HAFALLQDDVMDRSSQRRGSPAVHVQLAEWYRLRGLSGPAGRFGESAAILLGDVCLIWAE 159 Query: 119 CMVIET-----KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VL 172 M+ E+ + Q+ + LA G+ L+ + L + + K+ Sbjct: 160 QMLRESGVEARRLQQLWPRYDAMRIELAVGQFADLANDIRDRPSLRTVLDIARRKSGNYT 219 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 LE+ + +A + L YG ++G AFQL DD+L G GK G D + Sbjct: 220 VRRPLEMGAAMADCDDRTLTQLGLYGADVGEAFQLRDDLLGVFGPPATTGKPNGGDLLDR 279 Query: 233 KPTLPVILAFQ 243 K T V+ A + Sbjct: 280 KATSVVVAAHE 290 >gi|281350998|gb|EFB26582.1| hypothetical protein PANDA_005594 [Ailuropoda melanoleuca] Length = 302 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 35/272 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 50 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 109 Query: 126 SQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKT--------AVLFSAA 176 + + +E L+ L +G + S S K +TE+ + K +T A AA Sbjct: 110 NTKVVELLASALMDLVQGVYHENSTSAKENHITEDIGISAWKKQTFLSHGALLAKSCQAA 169 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNGKP 234 +E++ A VQ+ Q YG ++ ++ ++ D+ + E + M N+ Sbjct: 170 MELAKHDADVQDMAFQ----YGKHMAMSHKINSDLQPFIKEKTSDSMAFNLN-------- 217 Query: 235 TLPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSY 290 + PV+L Q RE W I + G++ L++ + + +D + Sbjct: 218 SAPVVL-HQEFLGRE--LWIQQIGEAQEKGRLDYAKLRETIKAGKGVTSAIDL---CRYH 271 Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 G KA ++L+ P S + +L +V F + R + Sbjct: 272 GNKALEALQSFPPSEARSALENIV-FAVTRFS 302 >gi|62959205|gb|AAY23710.1| farnesyl diphosphate synthase [Roseobacter sp. JL-129] Length = 144 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 13/134 (9%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQL 148 LRRG W T+VLVGD L + F +V+ + S +A TLA+ + + Sbjct: 12 LRRGLPTVHKKWDEGTAVLVGDALQTLGFELVLSPECHPEPAVRSDLALTLAKAAGAKGM 71 Query: 149 SLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 L + LD+ E + + + KT L + E + +A + L +Y Sbjct: 72 VLGQALDIAAETADQPLTLDEIIALQNGKTGALIRWSAEAGARLAKADIA---PLTAYAD 128 Query: 200 NLGIAFQLVDDVLD 213 LG+AFQ+ DD+LD Sbjct: 129 ALGLAFQIADDILD 142 >gi|297678820|ref|XP_002817259.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like [Pongo abelii] Length = 415 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 34/271 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 164 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 223 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT--------AVLFSAAL 177 + + +E L+ L +G + S SK +T++ + K +T A AA+ Sbjct: 224 NTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAM 283 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNGKPT 235 E++ A VQ+ Q YG ++ ++ ++ DV + E + M N+ + Sbjct: 284 ELAKHDAEVQDMAFQ----YGKHMAMSHKINSDVQPFIKEKTSDSMTFNLN--------S 331 Query: 236 LPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 PV+L Q R + W I + G++ L++ + + +D +G Sbjct: 332 APVVL-HQEFLGR--DLWIKQIGEAQEKGRLDYAKLRERIKAGKGVTSAIDL---CRYHG 385 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 386 NKALEALESFPPSEARSALENIV-FAVTRFS 415 >gi|70887563|ref|NP_001020642.1| farnesyl pyrophosphate synthase [Danio rerio] gi|66911345|gb|AAH97112.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Danio rerio] gi|182891376|gb|AAI64398.1| Fdps protein [Danio rerio] Length = 356 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 41/255 (16%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRG------KVAARLVWGNQTSVLVGD-FLLSQA 117 +L+ IE + L+ DD++D S RRG K A L N +L G + L + Sbjct: 89 LLVGWCIELLQAFFLVADDIMDSSVTRRGQPCWYKKEAIGLDAINDAFLLEGSIYRLLRR 148 Query: 118 FC-----------MVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 C + ET Q L +AL L+ + +L + ++ E Y ++ Sbjct: 149 HCRGQPYYVHLLELFTETSFQTELGQALDLMTAPPHKIDLNRFTM--------ERYKAIV 200 Query: 166 KSKTAVLFSAALEVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 K KTA +S L V++ +AG++N + K+ + +G FQ+ DD LD G+ G Sbjct: 201 KYKTA-FYSFYLPVAAAMYMAGIENEIEHHNAKTILLEMGEFFQIQDDYLDCFGDPAVTG 259 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282 K IG D ++ K + V+ A T ++ ++ G+ E++++ +AL D Sbjct: 260 K-IGTDIQDNKCSWLVVTALGIMTPEQRAELEACY--GRSDAESVERV-------KALYD 309 Query: 283 TEYRAYSYGQKAKDS 297 T Y Q ++S Sbjct: 310 TLEMPMRYHQHEEES 324 >gi|149048094|gb|EDM00670.1| rCG62519, isoform CRA_b [Rattus norvegicus] Length = 420 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 20/201 (9%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 + +E + L+ DD++D S RRG++ G + LL A +++ Sbjct: 155 VGWCVELLQAFFLVLDDIMDSSHTRRGQICWYQKPGIGLDAINDALLLEAAIYRLLKFYC 214 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL- 172 +E L+L+ L Q + + LD+ TE+ Y ++K KTA Sbjct: 215 REQPYYLNLLELFLQSS--YQTEIGQTLDLITAPQGQVDLGRYTEKRYKSIVKYKTAFYS 272 Query: 173 FSAALEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 F + + +AG+ ALK + +G FQ+ DD LD G+ + GK +G D + Sbjct: 273 FYLPIAAAMYMAGIDGEKEHANALKIL-LEMGEFFQIQDDYLDLFGDPSVTGK-VGTDIQ 330 Query: 231 NGKPTLPVILAFQRGTKREKN 251 + K + V+ R T +++ Sbjct: 331 DNKCSWLVVQCLLRATPQQRQ 351 >gi|291449974|ref|ZP_06589364.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291352923|gb|EFE79825.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 435 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 16/101 (15%) Query: 41 GGKRLRPMLTL----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 GG+RLRP L A AL R + + A+E + T L+HDDV+D S LRRG+ A Sbjct: 127 GGRRLRPALLWWALRACALPDGDRARAALRVGAAVELLQTCALVHDDVMDSSRLRRGRPA 186 Query: 97 ARLVWGNQ------------TSVLVGDFLLSQAFCMVIETK 125 + +Q +VL GD L+ A + ET+ Sbjct: 187 LHVSLADQYGAAGTDLFAGAAAVLAGDLALAWAEDTLAETE 227 >gi|212534902|ref|XP_002147607.1| farnesyl-pyrophosphate synthetase [Penicillium marneffei ATCC 18224] gi|210070006|gb|EEA24096.1| farnesyl-pyrophosphate synthetase [Penicillium marneffei ATCC 18224] Length = 347 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 39/264 (14%) Query: 3 MLEDLTLKDMEKVNFLILKRI--CSDVEMIPDVVKYLIFS-------GGKRLRPMLTLAT 53 M+ +T + E ++K I +D +P+ K F+ GGK R M T Sbjct: 1 MVTRITRPEFEAFVHPLIKDIVEATDKYNLPENAKKWFFNSLNANIVGGKMNRGMSVPDT 60 Query: 54 ALMLEYRGD-----NHV-LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107 +L R NH+ +L E + L+ DD++D S RRG+ W Q V Sbjct: 61 GSILLGRPLTEEELNHLSVLGWLTELLQAFFLVSDDIMDGSITRRGQPC----WYRQEGV 116 Query: 108 ---LVGD-FLLSQAFCMVIET--KSQEAL-EALSLVACTLAEGELRQL-----SLSKNLD 155 + D F+L A ++++ +S A + + + T + EL QL + N+D Sbjct: 117 GMIAINDAFMLESAIYVILKKYFRSHPAYADFIDIFHETSWQTELGQLCDLITAPEDNVD 176 Query: 156 VTE---EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG---MNLGIAFQLVD 209 + E Y ++K KTA +S L V+ + +Q + + LK + LG FQ+ D Sbjct: 177 LNNFSMEKYTFIVKYKTAY-YSFYLPVALALYYLQVASPKNLKQCEDILIPLGEYFQIQD 235 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGK 233 D LD G +GK IG D ++ K Sbjct: 236 DYLDAFGSPETIGK-IGTDIQDNK 258 >gi|325129055|gb|EGC51905.1| geranyltranstransferase [Neisseria meningitidis N1568] Length = 143 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 27/42 (64%) Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L +Y LG+AFQ++DDVLD + +GK G+D N KPT Sbjct: 55 LDAYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPT 96 >gi|62959181|gb|AAY23698.1| farnesyl diphosphate synthase [Halomonas sp. JL-104] gi|62959191|gb|AAY23703.1| farnesyl diphosphate synthase [Paracoccus sp. JL-65] Length = 143 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 22/138 (15%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------------ALEALSLVA 137 LRRG V+G ++L GD LL+++F +V ++ + A A +V Sbjct: 12 LRRGLPTNHKVYGEAVAILSGDALLTKSFELVADSPFDDRSKVKIISMLSKAAGAEGMVG 71 Query: 138 CTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 +A EGE LSL E V K KT L A +I+G+ L+ Sbjct: 72 GQVADIEGESMALSL--------EQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLR 123 Query: 196 SYGMNLGIAFQLVDDVLD 213 + ++G+AFQ+ DD+LD Sbjct: 124 LFAEHIGLAFQIRDDILD 141 >gi|62959185|gb|AAY23700.1| farnesyl diphosphate synthase [Bacillus sp. JL-26] Length = 143 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 22/138 (15%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------------ALEALSLVA 137 LRRG V+G ++L GD LL+++F +V ++ + A A +V Sbjct: 12 LRRGLPTNHKVYGEAVAILSGDALLTKSFELVADSPFDDRSKVKIISMLSKAAGAEGMVG 71 Query: 138 CTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 +A EGE LSL E V K KT L A +I+G+ L+ Sbjct: 72 GQVADIEGESMALSL--------EQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLR 123 Query: 196 SYGMNLGIAFQLVDDVLD 213 + ++G+AFQ+ DD+LD Sbjct: 124 LFAEHIGLAFQIRDDILD 141 >gi|62959195|gb|AAY23705.1| farnesyl diphosphate synthase [Micrococcus sp. JL-76] Length = 143 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 22/138 (15%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE------------ALEALSLVA 137 LRRG V+G ++L GD LL+++F +V ++ + A A +V Sbjct: 12 LRRGLPTNHKVYGEAVAILSGDALLTKSFELVADSPFDDRSKVKIISMLSKAAGAEGMVG 71 Query: 138 CTLA--EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 +A EGE LSL E V K KT L A +I+G+ L+ Sbjct: 72 GQVADIEGESMALSL--------EQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLR 123 Query: 196 SYGMNLGIAFQLVDDVLD 213 + ++G+AFQ+ DD+LD Sbjct: 124 LFAEHIGLAFQIRDDILD 141 >gi|194376472|dbj|BAG62995.1| unnamed protein product [Homo sapiens] Length = 263 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 34/271 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IH A L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 12 LAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 71 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT--------AVLFSAAL 177 + + +E L+ L +G + S SK +T++ + K +T A AA+ Sbjct: 72 NTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAM 131 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNGKPT 235 E++ A VQN Q YG ++ ++ ++ DV + E + M N+ + Sbjct: 132 ELAKHDAEVQNMAFQ----YGKHMAMSHKINSDVQPFIKEKTSDSMTFNLN--------S 179 Query: 236 LPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 PV+L Q R+ W I + G++ L++ + + +D +G Sbjct: 180 APVVL-HQEFLGRD--LWIKQIGEAQEKGRLDYAKLRERIKAGKGVTSAIDL---CRYHG 233 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 234 NKALEALESFPPSEARSALENIV-FAVTRFS 263 >gi|149245192|ref|XP_001527130.1| farnesyl pyrophosphate synthetase [Lodderomyces elongisporus NRRL YB-4239] gi|146449524|gb|EDK43780.1| farnesyl pyrophosphate synthetase [Lodderomyces elongisporus NRRL YB-4239] Length = 351 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 24/186 (12%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +L AIE + L+ DD++D S RRG+ L G + F+L A ++ Sbjct: 83 ILGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLAEGVGNIAINDSFMLEGAIYEILRKH 142 Query: 126 SQE---ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-------VLFSA 175 ++ ++ L L + EL QL LD+ D HV SK + V+F Sbjct: 143 FRQDSYYVDLLDLFHEVTFQTELGQL-----LDLVTADEEHVDLSKFSLAKHSFIVIFKT 197 Query: 176 A-------LEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 A + ++ ++G+ ++ Q +K + LG FQ+ DD LD G ++GK IG Sbjct: 198 AYYSFYLPVALAMYMSGISDAKDLQQVKDILIPLGEYFQIQDDFLDCFGTPEQIGK-IGT 256 Query: 228 DFRNGK 233 D ++ K Sbjct: 257 DIKDNK 262 >gi|296818997|ref|XP_002849789.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480] gi|238840242|gb|EEQ29904.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480] Length = 618 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 15/180 (8%) Query: 77 ATLLH---DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 A +LH DD+ D+S LRRGK + L++G ++ +++ F + S A A+ Sbjct: 375 ADMLHHALDDIEDNSKLRRGKPSTHLIYGAAQTINSANYVFVNTFAE-LSNLSNAAASAI 433 Query: 134 SL--VACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + V + G+ L + T E+Y+ +I +KT LF + + + N Sbjct: 434 YIDEVQNSFC-GQASDLHWKYHSCCPTVEEYMMMIDNKTGALFRLCVRLMQAESAAPNKF 492 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 L Y +Q+ DD + + K ED GK +LP+I Q +K Sbjct: 493 VTLLGRY-------YQIRDDYQNLASKEYTKFKGFCEDLDEGKMSLPLIYTLQHPGAHQK 545 >gi|53733369|gb|AAH83515.1| Fdps protein [Danio rerio] Length = 359 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 41/255 (16%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRG------KVAARLVWGNQTSVLVGD-FLLSQA 117 +L+ IE + L+ DD++D S RRG K A L N +L G + L + Sbjct: 92 LLVGWCIELLQAFFLVADDIMDSSVTRRGQPCWYKKEAIGLDAINDAFLLEGSIYRLLRR 151 Query: 118 FC-----------MVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 C + ET Q L +AL L+ + +L + ++ E Y ++ Sbjct: 152 HCRGQPYYVHLLELFTETSFQTELGQALDLMTAPPHKIDLNRFTM--------ERYKAIV 203 Query: 166 KSKTAVLFSAALEVSS--LIAGVQNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 K KTA +S L V++ +AG++N + K+ + +G FQ+ DD LD G+ G Sbjct: 204 KYKTA-FYSFYLPVAAAMYMAGIENEIEHHNAKTILLEMGEFFQIQDDYLDCFGDPAVTG 262 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282 K IG D ++ K + V+ A T ++ ++ G+ E++++ +AL D Sbjct: 263 K-IGTDIQDNKCSWLVVTALGIMTPEQRAELEACY--GRSDAESVERV-------KALYD 312 Query: 283 TEYRAYSYGQKAKDS 297 T Y Q ++S Sbjct: 313 TLEMPMRYHQHEEES 327 >gi|219666168|ref|YP_002456603.1| geranylgeranyl pyrophosphate synthase-like protein [Desulfitobacterium hafniense DCB-2] gi|219536428|gb|ACL18167.1| Geranylgeranyl pyrophosphate synthase-like protein [Desulfitobacterium hafniense DCB-2] Length = 318 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 6/113 (5%) Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E L + G+ R+ V+ E Y + K L + A ++ +++ G Sbjct: 127 REVAATLHRTGICASNGQFREFIYDDRQQVSFEQYFEMAGQKAGSLTACACKIGAILGGA 186 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + V L+ +G+NLGI Q+ +D+ D+ ++ K+ DF N K TLP + Sbjct: 187 EEPVIHGLEQFGINLGILNQIRNDLNDF---LDFFRKS---DFVNNKKTLPYV 233 >gi|89892905|ref|YP_516392.1| hypothetical protein DSY0159 [Desulfitobacterium hafniense Y51] gi|89332353|dbj|BAE81948.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 319 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 6/113 (5%) Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E L + G+ R+ V+ E Y + K L + A ++ +++ G Sbjct: 128 REVAATLHRTGICASNGQFREFIYDDRQQVSFEQYFEMAGQKAGSLTACACKIGAILGGA 187 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + V L+ +G+NLGI Q+ +D+ D+ ++ K+ DF N K TLP + Sbjct: 188 EEPVIHGLEQFGINLGILNQIRNDLNDF---LDFFRKS---DFVNNKKTLPYV 234 >gi|239978074|ref|ZP_04700598.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 390 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 16/101 (15%) Query: 41 GGKRLRPMLTL----ATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVA 96 GG+RLRP L A AL R + + A+E + T L+HDDV+D S LRRG+ A Sbjct: 82 GGRRLRPALLWWALRACALPDGDRARAALRVGAAVELLQTCALVHDDVMDSSRLRRGRPA 141 Query: 97 ARLVWGNQ------------TSVLVGDFLLSQAFCMVIETK 125 + +Q +VL GD L+ A + ET+ Sbjct: 142 LHVSLADQYGAAGTDLFAGAAAVLAGDLALAWAEDTLAETE 182 >gi|169776171|ref|XP_001822552.1| geranyltranstransferase [Aspergillus oryzae RIB40] gi|238502861|ref|XP_002382664.1| farnesyl-pyrophosphate synthetase [Aspergillus flavus NRRL3357] gi|83771287|dbj|BAE61419.1| unnamed protein product [Aspergillus oryzae] gi|220691474|gb|EED47822.1| farnesyl-pyrophosphate synthetase [Aspergillus flavus NRRL3357] Length = 346 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 30/235 (12%) Query: 40 SGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R + T L L E + + +L E + L+ DD++D S RRG Sbjct: 46 PGGKLNRGLSCPDTGLALLEKPLTEEQFKHLSILGWLTELLQAFFLVSDDIMDSSITRRG 105 Query: 94 KVAARLVWGNQTSV---LVGD-FLLSQAFCMVIET--KSQEAL-EALSLVACTLAEGELR 146 + W Q V + D FLL + ++++ +S A + + L T + EL Sbjct: 106 QPC----WYRQEGVGLIAINDAFLLESSIYVILKKHFRSHPAYADFIDLFHETTWQTELG 161 Query: 147 QL-----SLSKNLDVTE---EDYLHVIKSKTA---VLFSAALEVSSLIAGVQNSVRQALK 195 QL + +D+ E Y+ ++ KTA AL + L +++RQA Sbjct: 162 QLCDLITAPEDKVDLNNFSMEKYMFIVTYKTAYYSFYLPVALALLYLQRATPSNLRQA-H 220 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + LG FQ+ DD LD G+ +GK IG D ++ K + V A QR ++ Sbjct: 221 DILIPLGQYFQVQDDYLDAYGDPEVIGK-IGTDIKDNKCSWLVNQALQRCNAEQR 274 >gi|312112561|ref|YP_003990877.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1] gi|311217662|gb|ADP76266.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1] Length = 316 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 22/193 (11%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + A AIE + AT + D++ D + ++ ++L G +V + + L+ +AF +++ Sbjct: 73 ITYAAAIELLILATDIFDEISDHD--QSNEIISQLSIGE--TVTIANALMMEAFRLILHN 128 Query: 125 KSQEALEALSLVACTL---AEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVS 180 + E +++ L G+ R L + V TEE+Y H+I+ K++ L E+S Sbjct: 129 SKTDVYEKFAIIIHELQNACNGQWRDLHFVISEHVPTEEEYFHLIQQKSSSLVKLVCELS 188 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + N + ++GI+ QL +D D + + D N K TLP I Sbjct: 189 D----IHN--QNIWGPIATDIGISGQLKNDAKD-------ILSDHKSDLINKKATLPFIK 235 Query: 241 AFQRGTKREKNFW 253 A + +++ N W Sbjct: 236 AVEYSIEKD-NGW 247 >gi|213965295|ref|ZP_03393492.1| geranylgeranyl pyrophosphate synthase [Corynebacterium amycolatum SK46] gi|213952147|gb|EEB63532.1| geranylgeranyl pyrophosphate synthase [Corynebacterium amycolatum SK46] Length = 370 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 76/252 (30%), Positives = 113/252 (44%), Gaps = 33/252 (13%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALM---LEYR----GDNHVLL--ACAIEFIHTATLLHD 82 D + + +GGKR+RP L LE R D+ ++ A+E I L+HD Sbjct: 46 DSLHSFVLNGGKRVRPAFAWQGWLGAGGLEGRFSPAEDSPAVMNAVSALELIQACALIHD 105 Query: 83 DVVDDSALRRGKVAARLV---------W-------GNQTSVLVGDFLLSQAFCMVIETK- 125 D++DD+ RRG V W G ++L+GD L+ A M+ + Sbjct: 106 DIIDDADTRRGAPTIHKVFEAKHEANSWNGAADRFGISAAILIGDVALTWADDMMHSSGL 165 Query: 126 SQEAL-EALSLVACTLAE---GELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVS 180 S EAL AL E G+L ++ + D E + KTA L + Sbjct: 166 SSEALTRALVPWRAMRTEVLGGQLLDITAEASRDSRVETAEKINLFKTAAYTIERPLHIG 225 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV-- 238 + IAG + +A +S+G ++G+AFQL DD L G+ GK G+D R GK T+ V Sbjct: 226 AAIAGAPAELVEAYRSFGRDIGVAFQLRDDQLGVFGDPEVTGKPAGDDLREGKRTVLVGQ 285 Query: 239 ILAFQRGTKREK 250 L+ R + EK Sbjct: 286 ALSLYRESAPEK 297 >gi|115738308|ref|XP_781908.2| PREDICTED: similar to Chain , Avian Farnesyl Diphosphate Synthase (Fps) (E.C.2.5.1.10) [Strongylocentrotus purpuratus] gi|115948816|ref|XP_001196369.1| PREDICTED: similar to Chain , Avian Farnesyl Diphosphate Synthase (Fps) (E.C.2.5.1.10) [Strongylocentrotus purpuratus] Length = 619 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 35/238 (14%) Query: 40 SGGKRLRPMLTLATALM-----LEYRGDN---HVLLACAIEFIHTATLLHDDVVDDSALR 91 GGKR R LT+ A ++ DN ++L +E++ L+ DD++D S R Sbjct: 320 PGGKRNR-GLTVVNAFRQLANSVQNTEDNIHTAMVLGWCVEWLQAYFLIADDMMDQSKTR 378 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAF----CMVIETKSQEALEALSLVACTLAEGELRQ 147 RG+ W + VG+ ++ +F C+ K + + L Q Sbjct: 379 RGQPC----WYKKDG--VGNVAINDSFYVEACIYKLLKRYIGHQPYYVQVMELFHETTYQ 432 Query: 148 LSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQA 193 + ++LD+ TE+ Y ++K KTA F ++ + G+ ++ Sbjct: 433 TIMGQSLDLLTSPENDRDLNRFTEQRYAAIVKWKTAFYSFYLPEALAMHMVGISDAKSHT 492 Query: 194 -LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 K+ + +G FQ+ DD LD GE +GK IG D K V+ A QR T ++ Sbjct: 493 NAKTILLQMGHFFQVQDDYLDCYGEPEVIGK-IGTDIEENKCGWLVVQALQRVTPDQR 549 >gi|109072227|ref|XP_001090452.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 1 [Macaca mulatta] Length = 399 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 34/271 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT--------AVLFSAAL 177 + + +E L+ L +G + S SK +T++ + K +T A AA+ Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAM 267 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNGKPT 235 E++ A VQ+ Q YG ++ ++ ++ DV + E + M N+ + Sbjct: 268 ELAKHDAEVQDMAFQ----YGKHMAMSHKINSDVQPFIKEKTSDSMTFNLN--------S 315 Query: 236 LPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 PV+L Q R+ W I + G++ L++ + + +D +G Sbjct: 316 APVVL-HQEFLGRD--LWIKQIGEAQEKGRLDYAKLRERIKAGKGVTSAIDL---CRYHG 369 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 370 NKALEALESFPPSEARSALENIV-FAVTRFS 399 >gi|165934064|gb|ABY74558.1| farnesyl diphosphate synthase (predicted) [Callithrix jacchus] Length = 353 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 18/220 (8%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 92 VELLQAFFLVTDDIMDSSLTRRGQICWYQKPGVGLDAINDAVLLEACVYRLLKLYCREQP 151 Query: 131 EALSLVACTLA---EGELRQ-----LSLSKNLDV---TEEDYLHVIKSKTAVLFSAALEV 179 L+L+ L + E+ Q + N+D+ TE+ Y ++K K A +S L V Sbjct: 152 YYLNLIELFLQSSYQTEIGQTPDFITAPQDNVDLDRFTEKRYKSIVKYKMA-FYSFYLPV 210 Query: 180 SS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++ +AG+ A + +G FQ+ DD LD G+ + GK +G D ++ K + Sbjct: 211 AAAMYMAGIDGEKEHANANEILLEMGEFFQIQDDYLDLFGDPSVTGK-VGTDIQDNKCSW 269 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 V+ QR T ++ K N G+ E + + + E Sbjct: 270 LVVQCLQRSTPEQRQILKE--NYGQKEAEKVARVKALYEE 307 >gi|301763920|ref|XP_002917381.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like [Ailuropoda melanoleuca] Length = 398 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 37/273 (13%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 146 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 205 Query: 126 SQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKT--------AVLFSAA 176 + + +E L+ L +G + S S K +TE+ + K +T A AA Sbjct: 206 NTKVVELLASALMDLVQGVYHENSTSAKENHITEDIGISAWKKQTFLSHGALLAKSCQAA 265 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNGKP 234 +E++ A VQ+ Q YG ++ ++ ++ D+ + E + M N+ Sbjct: 266 MELAKHDADVQDMAFQ----YGKHMAMSHKINSDLQPFIKEKTSDSMAFNLN-------- 313 Query: 235 TLPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVD-TEYRAYS 289 + PV+L Q RE W I + G++ L++ + + +D Y Sbjct: 314 SAPVVL-HQEFLGRE--LWIQQIGEAQEKGRLDYAKLRETIKAGKGVTSAIDLCRY---- 366 Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +G KA ++L+ P S + +L +V F + R + Sbjct: 367 HGNKALEALQSFPPSEARSALENIV-FAVTRFS 398 >gi|327286120|ref|XP_003227779.1| PREDICTED: farnesyl pyrophosphate synthase-like [Anolis carolinensis] Length = 351 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 18/201 (8%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +++ +E + L+ DD++D S RRG G + + LL + +++ Sbjct: 86 MVVGWCVELLQAFFLVADDIMDGSLTRRGHPCWYKKEGVGLAAVNDSLLLESSIYRLLKR 145 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDV-----------TEEDYLHVIKSKTAVLF 173 + L+L+ L Q L + LD+ TEE Y ++K KTA + Sbjct: 146 HCRGQPYYLNLLELFLQSA--YQTELGQTLDLISAPPVDLDSFTEERYKAIVKYKTA-FY 202 Query: 174 SAALEVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 S L V++ +AG+ + + ++ + +G FQ+ DD LD G+ + GK IG D Sbjct: 203 SFYLPVAAAMYMAGIDSEEEHSHARTILLEMGEFFQIQDDYLDCFGDPDVTGK-IGTDIE 261 Query: 231 NGKPTLPVILAFQRGTKREKN 251 + K + V+ +R + +K Sbjct: 262 DNKCSWLVVQCLKRASPEQKQ 282 >gi|17481240|dbj|BAB79204.1| farnesyl diphosphate synthase [Rhodobacter sp. AP-10] Length = 137 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 12/129 (9%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG+ + W T+VL GD L + AF + + A + LVA + + Sbjct: 12 LRRGQPTVHVKWDEVTAVLAGDALQTLAFELCCDPAMGPADRRIELVAALARASGVEGMV 71 Query: 150 LSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 + LD+ T E+ + KT L A E +++AG R L+ Y Sbjct: 72 HGQALDIAAESAGRPLTLEEITALQAGKTGALIVFAAEAGAILAGAD---RAPLRRYAQA 128 Query: 201 LGIAFQLVD 209 LG+AFQ+ D Sbjct: 129 LGLAFQIAD 137 >gi|114608723|ref|XP_001146753.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 1 [Pan troglodytes] Length = 399 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 34/271 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT--------AVLFSAAL 177 + + +E L+ L +G + S SK +T++ + K +T A AA+ Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAM 267 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNGKPT 235 E++ A VQ+ Q YG ++ ++ ++ DV + E + M N+ + Sbjct: 268 ELAKHDAEVQDMAFQ----YGKHMAMSHKINSDVQPFIKEKTSDSMTFNLN--------S 315 Query: 236 LPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 PV+L Q R+ W I + G++ L++ + + +D +G Sbjct: 316 APVVL-HQEFLGRD--LWIKQIGEAQEKGRLDYAKLRERIKAGKGVTSAIDL---CRYHG 369 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 370 NKALEALESFPPSEARSALENIV-FAVTRFS 399 >gi|328793675|ref|XP_624298.3| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera] Length = 418 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 34/208 (16%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +LA IE +H ++ +D+VD + +RR + W V VG ++ A +++ET Sbjct: 149 ILAWCIEIMHAVHIVMNDIVDHADMRRNQPT----W----HVKVGLGAINDA--LIMETC 198 Query: 126 SQEALEA-LSLVACTL-------------AEGELRQLSLSK------NLDVTEED-YLHV 164 Q+ LE L C + G + +S N D+ D Y + Sbjct: 199 IQKLLEKHFKLKNCYVELMNIFWKYNKKTGHGHRLDIFISTNWRKKANFDLFSMDRYNTL 258 Query: 165 IKSKTAVL-FSAALEVSSLIAGVQNS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 +K K + L F ++ AGV +S + + + + +G +Q+ +D L+Y + E+G Sbjct: 259 VKYKMSCLSFIFPFSLAMRFAGVIDSEMHREAEKILLKIGHFYQVQNDFLNYYSK-EEIG 317 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREK 250 D + GK T P+++A +R T +K Sbjct: 318 GKSETDIQEGKCTWPIVIALERATAEQK 345 >gi|1146159|gb|AAB07264.1| farnesyl diphosphate synthase short form [Arabidopsis thaliana] Length = 343 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 39/278 (14%) Query: 41 GGKRLRPMLTLATALMLEYRGD---NHVLLACA----IEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + +L+ D V L+CA IE++ L+ DD++D+S RRG Sbjct: 46 GGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRG 105 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV----------AC----- 138 + V + LL +++ ++ + LV AC Sbjct: 106 QPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMID 165 Query: 139 --TLAEGE--LRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQA 193 T EGE L + SLS + +++ KTA F + + L+AG Sbjct: 166 LITTFEGEKDLAKYSLSI--------HRRIVQYKTAYYSFYLPVACALLMAGENLENHID 217 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 +K+ +++GI FQ+ DD LD + +GK IG D + K + V+ A +R ++ + Sbjct: 218 VKNVLVDMGIYFQVQDDYLDCFADPETLGK-IGTDIEDFKCSWLVVKALERCSEEQTKIL 276 Query: 254 KSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSY 290 N GK N+ K + +E + V EY + SY Sbjct: 277 YE--NYGKPDPSNVAKVKDLYKELDLEGVFMEYESKSY 312 >gi|297197409|ref|ZP_06914806.1| polyprenyl diphosphate synthase [Streptomyces sviceus ATCC 29083] gi|297146716|gb|EFH28304.1| polyprenyl diphosphate synthase [Streptomyces sviceus ATCC 29083] Length = 115 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 34/68 (50%) Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 AL G +LG+AFQ+VDDVL G+ GK + D R K T PV+ A T Sbjct: 1 ALDRAGRHLGVAFQIVDDVLGIWGDPLTTGKPVHGDLRERKKTFPVLTALDSPTPAAARL 60 Query: 253 WKSTINDG 260 + +DG Sbjct: 61 ARLLESDG 68 >gi|17508563|ref|NP_493027.1| hypothetical protein R06C1.2 [Caenorhabditis elegans] gi|5824560|emb|CAB03221.2| C. elegans protein R06C1.2, confirmed by transcript evidence [Caenorhabditis elegans] Length = 352 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 76/303 (25%), Positives = 125/303 (41%), Gaps = 62/303 (20%) Query: 41 GGKRLRPMLTLAT--ALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R L + T AL R + L A +E I + L+ DD++D+S RRG Sbjct: 51 GGKYSRASLCVDTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDIMDNSETRRG 110 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCM--VIETKSQEALEAL----------------SL 135 K W + VG ++ AF M +E + AL +L Sbjct: 111 KPC----WFRREG--VGMSAINDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSKQKTL 164 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA--VLFSA---ALEVSSLIAGVQNSV 190 + L + Q+S T + Y ++++KT+ +F AL +S ++A Sbjct: 165 IGQFLDTSSVNQIS-----SFTWDRYELMVENKTSHYTVFHPIQMALIISDVLA-----Y 214 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 ++K +G FQ DD LD G+ GK IG D ++GK T + A Q+ K + Sbjct: 215 HGSVKKVAYQIGFLFQSQDDFLDVYGDPKITGK-IGTDIQDGKCTWLAVRALQKMHKTPE 273 Query: 251 NFWKSTINDGKIS--------VENLKKAFIIMRENRALVDTEYRAYS--YGQKAKDSLRC 300 + I + K S VE +K+ + + + E+R + + + K S+ Sbjct: 274 KWGAKLIEEFKTSFGSVDPEKVEKIKRIY-----DELQLKQEFRRFEKHFSGEIKKSISE 328 Query: 301 LPD 303 +PD Sbjct: 329 IPD 331 >gi|281211687|gb|EFA85849.1| hypothetical protein PPL_01081 [Polysphondylium pallidum PN500] Length = 1488 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 32/196 (16%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVA---ARLVWGNQTSVLVGDFLLSQAF---- 118 +L +E++ L+ DD++D S RRG+ R + ++ + VG ++ AF Sbjct: 1215 VLGWCVEWLQAFFLVADDIMDQSITRRGQPCWYRTRNMLSSEPNATVGSIAINDAFILES 1274 Query: 119 CMVIETKS---QEALEA--LSLVACTLAEGELRQLSLSKNLDVTEED------------Y 161 C+ I K E+ A L L T + EL QL LD+T + Y Sbjct: 1275 CIYILVKKYFRNESYYADLLDLFHETSYQTELGQL-----LDLTTQPNRGDFSMYSLDTY 1329 Query: 162 LHVIKSKTAVL-FSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 ++K KTA F + ++ L+AG+ + K + +G FQ+ DD LD G+ Sbjct: 1330 RRIVKYKTAYYSFYLPVALAMLMAGITSKPAFDTAKDILLPMGEYFQVQDDYLDCYGDPK 1389 Query: 220 EMGKNIGEDFRNGKPT 235 +GK IG D K T Sbjct: 1390 VIGK-IGRDIEENKCT 1404 >gi|332259792|ref|XP_003278965.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 [Nomascus leucogenys] Length = 399 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 34/271 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT--------AVLFSAAL 177 + + +E L+ L +G + S SK +T++ + K +T A AA+ Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAM 267 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNGKPT 235 E++ A VQ+ Q YG ++ ++ ++ DV + E + M N+ + Sbjct: 268 ELAKHDAEVQDMAFQ----YGKHMAMSHKINSDVQPFVKEKTSDSMTFNLN--------S 315 Query: 236 LPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 PV+L Q R+ W I + G++ L++ + + +D +G Sbjct: 316 APVVL-HQEFLGRD--LWIKQIGEAQEKGRLDYAKLRERIKAGKGVTSAIDL---CRYHG 369 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 370 NKALEALESFPPSEARSALENIV-FAVTRFS 399 >gi|120478|sp|P05369|FPPS_RAT RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Cholesterol-regulated 39 kDa protein; Short=CR 39; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase Length = 353 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 20/197 (10%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL A +++ +E Sbjct: 92 VELLQAFFLVLDDIMDSSYTRRGQICWYQKPGIGLDAINDALLLEAAIYRLLKFYCREQP 151 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 152 YYLNLLELFLQSS--YQTEIGQTLDLITAPQGQVDLGRYTEKRYKSIVKYKTAFYSFYLP 209 Query: 177 LEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + +AG+ ALK + +G FQ+ DD LD G+ + GK +G D ++ K Sbjct: 210 IAAAMYMAGIDGEKEHANALKIL-LEMGEFFQIQDDYLDLFGDPSVTGK-VGTDIQDNKC 267 Query: 235 TLPVILAFQRGTKREKN 251 + V+ R T +++ Sbjct: 268 SWLVVQCLLRATPQQRQ 284 >gi|13929206|ref|NP_114028.1| farnesyl pyrophosphate synthase [Rattus norvegicus] gi|204092|gb|AAA41143.1| farnesyl pyrophosphate synthetase [Rattus norvegicus] gi|37590777|gb|AAH59125.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Rattus norvegicus] gi|149048093|gb|EDM00669.1| rCG62519, isoform CRA_a [Rattus norvegicus] Length = 353 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 20/197 (10%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL A +++ +E Sbjct: 92 VELLQAFFLVLDDIMDSSHTRRGQICWYQKPGIGLDAINDALLLEAAIYRLLKFYCREQP 151 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 152 YYLNLLELFLQSS--YQTEIGQTLDLITAPQGQVDLGRYTEKRYKSIVKYKTAFYSFYLP 209 Query: 177 LEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + +AG+ ALK + +G FQ+ DD LD G+ + GK +G D ++ K Sbjct: 210 IAAAMYMAGIDGEKEHANALKIL-LEMGEFFQIQDDYLDLFGDPSVTGK-VGTDIQDNKC 267 Query: 235 TLPVILAFQRGTKREKN 251 + V+ R T +++ Sbjct: 268 SWLVVQCLLRATPQQRQ 284 >gi|9719409|gb|AAF97788.1| candidate tumor suppressor protein [Homo sapiens] Length = 399 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 34/271 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IH A L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT--------AVLFSAAL 177 + + +E L+ L +G + S SK +T++ + K +T A AA+ Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAM 267 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNGKPT 235 E++ A VQN Q YG ++ ++ ++ DV + E + M N+ + Sbjct: 268 ELAKHDAEVQNMAFQ----YGKHMAMSHKINSDVQPFIKEKTSDSMTFNLN--------S 315 Query: 236 LPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 PV+L Q R+ W I + G++ L++ + + +D +G Sbjct: 316 APVVL-HQEFLGRD--LWIKQIGEAQEKGRLDYAKLRERIKAGKGVTSAIDL---CRYHG 369 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 370 NKALEALESFPPSEARSALENIV-FAVTRFS 399 >gi|62959183|gb|AAY23699.1| farnesyl diphosphate synthase [Exiguobacterium sp. JL-24] Length = 144 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 71/133 (53%), Gaps = 11/133 (8%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---QEALEALSLVA-CTLAEGEL 145 LRRG V+G ++L GD LL+ +F ++ E + ++ +E ++L+A C EG + Sbjct: 12 LRRGNPTNHKVFGEAMAILAGDGLLTFSFQLLAEDEHLPDEKKVELIALLARCAGPEGMV 71 Query: 146 R-QLS----LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 Q++ + L V E +HV K+ ++FS ++++ +L+ + + Sbjct: 72 GGQVADIEGENGELTVEELQSIHVRKTGKLLMFSVM--AGAIMSDASPGELASLEEFAYH 129 Query: 201 LGIAFQLVDDVLD 213 +G+AFQ+ DD+LD Sbjct: 130 VGLAFQIQDDILD 142 >gi|291397823|ref|XP_002715374.1| PREDICTED: farnesyl diphosphate synthase [Oryctolagus cuniculus] Length = 937 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 30/203 (14%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQAFCM--VIETK 125 +E + L+ DD++D S RRG+ W + + V D LL +A C+ +++ Sbjct: 159 VELLQAFFLVSDDIMDSSLTRRGQP----CWYQKPGIGLDAVNDALLLEA-CIYRLLKFY 213 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL 172 +E L+L+ L Q + + LD+ TE+ Y ++K KTA Sbjct: 214 CREQPYYLNLIELFLQSS--YQTEIGQTLDLITAPQGSVDLSRYTEKRYKSIVKYKTA-F 270 Query: 173 FSAALEVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 +S L V++ +AG+ A K + +G FQ+ DD LD G+ + GK +G D Sbjct: 271 YSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-VGTDI 329 Query: 230 RNGKPTLPVILAFQRGTKREKNF 252 ++ K + V+ QR T ++ Sbjct: 330 QDNKCSWLVVQCLQRATPEQRQI 352 >gi|228962654|ref|ZP_04123960.1| Pre-ComX modifying enzyme [Bacillus thuringiensis serovar pakistani str. T13001] gi|228797045|gb|EEM44349.1| Pre-ComX modifying enzyme [Bacillus thuringiensis serovar pakistani str. T13001] Length = 298 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 27/230 (11%) Query: 101 WG--NQTSVLVGDFLL---SQAFCMVIETKSQEA-LEALSLVACTLAEGELRQLSLSKNL 154 WG N+ ++L LL SQ + IE ++A L + + T +G+ L++ + Sbjct: 80 WGSINKATLLNYAILLIFISQKILIDIELMKKDAILRYFNELTITAIQGQHLDLNM---V 136 Query: 155 DVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 EE YL +IK K+ L S A+ + LIA N +++ Y +GI+ QL++D D Sbjct: 137 CTNEEQYLEIIKKKSGALTSLAVVIGVLIAQ-DNYALESIIEYATYIGISGQLLNDASDV 195 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR---EKNFWKSTINDGKISVENLKKAF 271 + + D RN K T PV+ ++ K+++ I G++ +EN + Sbjct: 196 ------IRLDDKSDVRNKKLTFPVLYLLNHPSQNLTIVKSYYNDEIGFGEL-IENRE--- 245 Query: 272 IIMRE---NRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 +I++E ++A+ T + QKA + ++ + S+ KK E +DF L Sbjct: 246 LIIKEILNSKAIEYTLIYKEIFVQKALEIVKGIAFSNQKKE-YEFIDFLL 294 >gi|169808399|ref|NP_065114.3| decaprenyl-diphosphate synthase subunit 2 [Homo sapiens] gi|73620006|sp|Q86YH6|DLP1_HUMAN RecName: Full=Decaprenyl-diphosphate synthase subunit 2; AltName: Full=All-trans-decaprenyl-diphosphate synthase subunit 2; AltName: Full=Candidate tumor suppressor protein; AltName: Full=Decaprenyl pyrophosphate synthase subunit 2 gi|55665807|emb|CAH73573.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens] gi|55958730|emb|CAI16109.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens] gi|56203647|emb|CAI22356.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens] gi|57162622|emb|CAI40036.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens] gi|81157933|dbj|BAE48217.1| subunit 2 of decaprenyl diphosphate synthase [Homo sapiens] gi|119568785|gb|EAW48400.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens] Length = 399 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 34/271 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IH A L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT--------AVLFSAAL 177 + + +E L+ L +G + S SK +T++ + K +T A AA+ Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAM 267 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNGKPT 235 E++ A VQN Q YG ++ ++ ++ DV + E + M N+ + Sbjct: 268 ELAKHDAEVQNMAFQ----YGKHMAMSHKINSDVQPFIKEKTSDSMTFNLN--------S 315 Query: 236 LPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 PV+L Q R+ W I + G++ L++ + + +D +G Sbjct: 316 APVVL-HQEFLGRD--LWIKQIGEAQEKGRLDYAKLRERIKAGKGVTSAIDL---CRYHG 369 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 370 NKALEALESFPPSEARSALENIV-FAVTRFS 399 >gi|297242529|gb|ADI24929.1| VrtD [Penicillium aethiopicum] Length = 349 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 22/225 (9%) Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + +L +E + L+ DD++D S RRGK + V G + + +L A M++ Sbjct: 80 DAAVLGWLVELLQATMLVLDDIMDGSPTRRGKPSWYRVPGVGMAAVNDATMLESAIYMLL 139 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKT 169 K A A+ L L Q+ L + D+ Y ++ KT Sbjct: 140 --KKYFAGRAIYLPVVDLFHETALQIELGQAFDMLIANEGTPDLTTFVPATYSQIVTYKT 197 Query: 170 AVLFSAALEVSSLIAGVQNSVRQ---ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 A +S L V+ + V + A ++ + +G FQ+ DD LD + +GK +G Sbjct: 198 A-FYSFYLPVALALHAVDAATPTNLAAARAILVPMGEYFQVQDDYLDCFADPTVLGK-VG 255 Query: 227 EDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 D GK + V+ A QR + + N G S E+ KA Sbjct: 256 TDIIEGKCSWLVVQALQRASTDQAQLLAE--NYGSASGESSVKAL 298 >gi|115399985|ref|XP_001215581.1| hypothetical protein ATEG_06403 [Aspergillus terreus NIH2624] gi|114191247|gb|EAU32947.1| hypothetical protein ATEG_06403 [Aspergillus terreus NIH2624] Length = 342 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 23/194 (11%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ-----TSVLVGDFLLSQAFCM 120 +L +E + L+ DD++D+S RRGK L W + T++ FL S F + Sbjct: 76 ILGWMVEMFQASYLVSDDIMDNSEYRRGK----LCWYRRDEVGLTAINDAAFLKSLMFSL 131 Query: 121 VIE--TKSQEALEALSLVACTLAEGELRQLS------LSKNLD-VTEEDYLHVIKSKTA- 170 + + E + L L+ EL QLS ++ LD +T E Y + ++KTA Sbjct: 132 LKKHFQHHAEYVGILELLNEASHRTELGQLSDADMAVKARGLDQMTVEAYSFIARNKTAF 191 Query: 171 --VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 AL + L +++++Q +K+ + +G FQ+ DD LD G+ + GK +G D Sbjct: 192 YSFYLPIALALHYLRLANESNLKQ-VKTIMLPMGEYFQVQDDYLDCFGDPSVTGK-VGTD 249 Query: 229 FRNGKPTLPVILAF 242 + K T ++ A Sbjct: 250 IEDHKCTWLIVRAL 263 >gi|148683291|gb|EDL15238.1| mCG17543, isoform CRA_a [Mus musculus] Length = 420 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 20/197 (10%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL + +++ +E Sbjct: 159 VELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAINDALLLEASIYRLLKFYCREQP 218 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 219 YYLNLLELFLQSS--YQTEIGQTLDLMTAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLP 276 Query: 177 LEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + +AG+ ALK M +G FQ+ DD LD G+ + GK +G D ++ K Sbjct: 277 IAAAMYMAGIDGEKEHANALKIL-MEMGEFFQVQDDYLDLFGDPSVTGK-VGTDIQDNKC 334 Query: 235 TLPVILAFQRGTKREKN 251 + V+ R + +++ Sbjct: 335 SWLVVQCLLRASPQQRQ 351 >gi|294945067|ref|XP_002784549.1| prenyl transferase, putative [Perkinsus marinus ATCC 50983] gi|239897625|gb|EER16345.1| prenyl transferase, putative [Perkinsus marinus ATCC 50983] Length = 146 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 16/146 (10%) Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR----GEVNEMGKNIGEDFRNG 232 +E +++A + ++ A +G++ G+ FQ+ DD+LD G +GK G D NG Sbjct: 1 MECVAILADLPPALVSACYLFGVHFGLEFQIRDDMLDVEMDVEGSSGSLGKPKGTDLLNG 60 Query: 233 KPTLPVILAFQRGTKR----EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288 + T P + A E+ F D ++++E L+ R +AL + Sbjct: 61 QATAPFLFACDDDPSLLPLVERGFKGK--GDAEMALEALQ------RNGKALQRAKLLVG 112 Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVV 314 + KA L LPD +++L+++ Sbjct: 113 YHASKAIGCLLQLPDCDARQALIDLT 138 >gi|255521547|ref|ZP_05388784.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL J1-175] Length = 126 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 7/116 (6%) Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KT L A+ ++ IA + L+ + N+GI FQ+ DD+LD G+ +MGK G Sbjct: 12 KTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGV 71 Query: 228 DFRNGKPTLPVILAFQRGTKREKN----FWKSTINDGKISVENLKK--AFIIMREN 277 D K T P +L G KR N KS ++ E L K I +REN Sbjct: 72 DAFLNKSTYPGLLTLD-GAKRALNEHVAIAKSALSGHDFDDEILLKLADLIALREN 126 >gi|195119624|ref|XP_002004330.1| GI19872 [Drosophila mojavensis] gi|193909398|gb|EDW08265.1| GI19872 [Drosophila mojavensis] Length = 413 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 38/254 (14%) Query: 24 CSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALML----EYRGDNHVL---LACAIEFIH 75 C+D V+ V++Y + GK+ R +LT+ T L + +N L L +E + Sbjct: 101 CNDAVKWFAQVMQYNV-PRGKKNRGILTVLTYKNLVPAEDLTPENIKLAQYLGWCVEMLQ 159 Query: 76 TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL-EALS 134 + ++ DDV+D+S RRG+ W S VG ++ A ++IE L + S Sbjct: 160 SFFIISDDVMDNSTTRRGQKC----WHRVES--VGLIAINDA--LMIENALYAILKQHFS 211 Query: 135 LVACTLAEGELRQ-----LSLSKNLDV----------TEEDYLHVIKSKTAVL-FSAALE 178 + C +A EL + ++LD+ T E Y ++ +KTA F Sbjct: 212 HLDCYVALMELFHEVTYITTCGQSLDLLNSNKSVSEFTMETYKAIVDNKTAHYSFYLPFA 271 Query: 179 VSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++ +AG ++ + RQ+ K+ + +G FQ+ DD LD G GK +G D ++ K + Sbjct: 272 LAMHLAGYKDAEAFRQS-KTILLEMGHFFQVQDDFLDCFGNPEVTGK-VGTDIQDNKCSW 329 Query: 237 PVILAFQRGTKREK 250 ++A QR +K Sbjct: 330 LAVVAMQRANAEQK 343 >gi|154152177|ref|NP_001093855.1| decaprenyl-diphosphate synthase subunit 2 [Bos taurus] gi|151554491|gb|AAI50064.1| PDSS2 protein [Bos taurus] gi|296484143|gb|DAA26258.1| prenyl diphosphate synthase, subunit 2 [Bos taurus] Length = 395 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 31/270 (11%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 143 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 202 Query: 126 SQEALEALSLVACTLAEGELRQLS-LSKNLDVTEEDYLHVIKSKT--------AVLFSAA 176 + + +E L+ L +G + S L+K +T++ + K +T A AA Sbjct: 203 NTKVVELLASALMDLVQGVYYENSTLAKENRITDDIGISTWKEQTFLSHGALLAKSCQAA 262 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +E++ A VQ+ Q YG ++ ++ ++ D+L + E G+ + Sbjct: 263 MELAKHDAEVQDMAFQ----YGKHMAMSHKINSDLLPFIKE------KTGDSLTFNLNSA 312 Query: 237 PVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292 PV+L Q R+ W I + G++ L++ + + +D +G Sbjct: 313 PVVL-HQEFLGRD--LWIKQIREAQEKGRLDYAKLRETIKAGKGVTSAIDL---CRYHGN 366 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 367 KALEALESFPPSEARTALENIV-FAMTRFS 395 >gi|189055159|dbj|BAG38145.1| unnamed protein product [Homo sapiens] Length = 399 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 34/271 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IH A L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT--------AVLFSAAL 177 + + +E L+ L +G + S SK +T++ + K +T A AA+ Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLARSCQAAM 267 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNGKPT 235 E++ A VQN Q YG ++ ++ ++ DV + E + M N+ + Sbjct: 268 ELAKHDAEVQNMAFQ----YGKHMAMSHKINSDVQPFIKEKTSDSMTFNLN--------S 315 Query: 236 LPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 PV+L Q R+ W I + G++ L++ + + +D +G Sbjct: 316 APVVL-HQEFLGRD--LWIKQIGEAQEKGRLDYAKLRERIKAGKGVTSAIDL---CRYHG 369 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 370 NKALEALESFPPSEARSALENIV-FAVTRFS 399 >gi|226480790|emb|CAX73492.1| dimethylallyltranstransferase [Schistosoma japonicum] Length = 386 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 8/90 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-------VLLACAIEFIHTATLL 80 + +VV Y + S GKR+R +L + + L+ + D+ L+ +E +H L+ Sbjct: 41 QHFQNVVSYNL-SSGKRIRGVLVVLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLV 99 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVG 110 DD++D+S LRRG+ L N L+G Sbjct: 100 LDDIIDNSTLRRGQPCWHLTQANLNRGLIG 129 >gi|15238801|ref|NP_199588.1| FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1); dimethylallyltranstransferase/ geranyltranstransferase [Arabidopsis thaliana] gi|21431776|sp|Q09152|FPPS1_ARATH RecName: Full=Farnesyl pyrophosphate synthase 1, mitochondrial; Short=FPP synthase 1; Short=FPS 1; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1; AltName: Full=Dimethylallyltranstransferase 1; AltName: Full=Farnesyl diphosphate synthase 1; AltName: Full=Geranyltranstransferase 1; Flags: Precursor gi|13878123|gb|AAK44139.1|AF370324_1 putative farnesyl diphosphate synthase precursor [Arabidopsis thaliana] gi|1872500|gb|AAB49290.1| farnesyl diphosphate synthase precursor [Arabidopsis thaliana] gi|7275351|gb|AAF44787.1| farnesyl diphosphate synthase long form [Arabidopsis thaliana] gi|10177913|dbj|BAB11324.1| farnesyl diphosphate synthase precursor [Arabidopsis thaliana] gi|17104795|gb|AAL34286.1| putative farnesyl diphosphate synthase precursor [Arabidopsis thaliana] gi|332008187|gb|AED95570.1| farnesyl diphosphate synthase 1 [Arabidopsis thaliana] Length = 384 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 39/278 (14%) Query: 41 GGKRLRPMLTLATALMLEYRGD---NHVLLACA----IEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + +L+ D V L+CA IE++ L+ DD++D+S RRG Sbjct: 87 GGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRG 146 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV----------AC----- 138 + V + LL +++ ++ + LV AC Sbjct: 147 QPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMID 206 Query: 139 --TLAEGE--LRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQA 193 T EGE L + SLS + +++ KTA F + + L+AG Sbjct: 207 LITTFEGEKDLAKYSLSI--------HRRIVQYKTAYYSFYLPVACALLMAGENLENHID 258 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 +K+ +++GI FQ+ DD LD + +GK IG D + K + V+ A +R ++ + Sbjct: 259 VKNVLVDMGIYFQVQDDYLDCFADPETLGK-IGTDIEDFKCSWLVVKALERCSEEQTKIL 317 Query: 254 KSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSY 290 N GK N+ K + +E + V EY + SY Sbjct: 318 YE--NYGKPDPSNVAKVKDLYKELDLEGVFMEYESKSY 353 >gi|87133512|gb|ABD24398.1| geranylgeranyl pyrophosphate synthase [Dietzia sp. CQ4] Length = 382 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 39/216 (18%) Query: 68 AC-AIEFIHTATLLHDDVVDDSALRRGKV---------AARLVWGNQTSV---------- 107 AC A+E +H A L+HDDV D RRG+ A +T+ Sbjct: 103 ACQALELLHEAFLVHDDVADGDDHRRGRPNLQGRTTTRGAEQGLSRETAAHVGMVGGLLG 162 Query: 108 -------LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 +G+F V+ E A V ++A GE + + + + T ++ Sbjct: 163 GDLLLVAAMGEFARLPVPAPVLHRAMAEVEGA---VVASIA-GEYADVHGAAHGEPTTQE 218 Query: 161 YLHVIKSKTAVLFSAALEV--SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 + I + +S L + ++AG + L+ G +LG A+Q+VDDVL G+ Sbjct: 219 HALAIGAAKTAAYSVTLPMVLGVVLAGGPEEMIPPLRETGRHLGTAYQVVDDVLGVFGDP 278 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 GK+ D PT V+LAF T + W Sbjct: 279 AVTGKSNEGDLMRRAPT--VLLAFASTT----DLWP 308 >gi|56756931|gb|AAW26637.1| SJCHGC02430 protein [Schistosoma japonicum] Length = 386 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 8/90 (8%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-------VLLACAIEFIHTATLL 80 + +VV Y + S GKR+R +L + + L+ + D+ L+ +E +H L+ Sbjct: 41 QHFQNVVSYNL-SSGKRIRGVLVVLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLV 99 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVG 110 DD++D+S LRRG+ L N L+G Sbjct: 100 LDDIIDNSTLRRGQPCWHLTQANLNRGLIG 129 >gi|195608286|gb|ACG25973.1| farnesyl pyrophosphate synthetase [Zea mays] Length = 355 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 29/208 (13%) Query: 66 LLACA----IEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTS-V 107 LAC IE++ L+ DD++D+S RRG+ V ++ N S + Sbjct: 86 FLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRI 145 Query: 108 LVGDFLLSQAFCMVIETKSQEALEALS---LVACTLAEGELRQLSLSKNLDVTEEDYLHV 164 L F + VI+ ++ + S L T EGE + L+ NL V H+ Sbjct: 146 LQRHFKGKPYYVDVIDLFNEVEFKTASGQMLDLITTHEGE-KDLT-KYNLTVRR----HI 199 Query: 165 IKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 ++ KTA F + + L+AG +K+ + +G FQ+ DD LD G++ +GK Sbjct: 200 VQYKTAYYSFYLPVACALLLAGENLDNFGDVKNILVEMGTYFQVQDDYLDCFGDLKFIGK 259 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKN 251 IG D + K + V+ A +R +++K+ Sbjct: 260 -IGTDIEDYKCSWLVVQALERADEKQKS 286 >gi|326516466|dbj|BAJ92388.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 408 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 34/244 (13%) Query: 42 GKRLRPMLTLATALMLEYRG----DNHVLLAC----AIEFIHTATLLHDDVVDDSALRRG 93 G +L L++ + ML G D LAC IE++ + L+ DD+ D++ RR Sbjct: 111 GGKLNRGLSVIDSYMLLREGTEVDDEDFYLACVLGWCIEWLQASALVLDDITDNAYTRRD 170 Query: 94 KVAARLVWGNQTSV---LVGDFLLSQAFCMVIETKS-------QEALEALSLVACTLAEG 143 L W +V + D +L + I + E +E + + A G Sbjct: 171 N----LCWYKLPTVGLSAINDGVLLKCHVQAIIKRYFKEKFYFMELMELWNEIGLQTAMG 226 Query: 144 ELRQL----SLSKNLDVTE-EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSY 197 ++ L + +K+L + Y ++K KT+ F + + L+ G + S LK+ Sbjct: 227 QMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYPPVACALLLNGAKLSDYVELKNV 286 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE-----KNF 252 + +G+ FQ+ DD LD G+ +GK +G D + K + ++ A + + E +N+ Sbjct: 287 LIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQAMELANENEMKILYENY 345 Query: 253 WKST 256 KS+ Sbjct: 346 GKSS 349 >gi|296206412|ref|XP_002750194.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix jacchus] Length = 395 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 33/244 (13%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQAFCMVIETK-- 125 +E + L+ DD++D S RG++ W + V + D +L +A C+ K Sbjct: 134 VELLQAFFLVTDDIMDSSLTHRGQI----CWYQKPGVGLDAINDAVLLEA-CVYRPLKLY 188 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL 172 +E L+L+ L Q + + LD+ TE+ Y ++K KTA Sbjct: 189 CREQPYYLNLIELFLQNS--YQTEIGQTLDLITAPQDNVDPDRFTEKRYKSIVKYKTA-F 245 Query: 173 FSAALEVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 +S L V++ +AG+ A K + +G FQ+ DD LD G+ + GK +G D Sbjct: 246 YSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-VGTDI 304 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAY 288 ++ K + V+ Q T ++ K N G+ E + + + E + V ++Y Sbjct: 305 QDNKCSWLVVQCLQWSTPEQRQILKE--NYGQKEAEKVARVKALYEELDLPAVFSKYEED 362 Query: 289 SYGQ 292 SY Sbjct: 363 SYNH 366 >gi|56789674|gb|AAH87886.1| Farnesyl diphosphate synthetase [Mus musculus] Length = 353 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 20/197 (10%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL + +++ +E Sbjct: 92 VELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAINDALLLEASIYRLLKFYCREQP 151 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 152 YYLNLLELFLQSS--YQTEIGQTLDLMTAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLP 209 Query: 177 LEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + +AG+ ALK M +G FQ+ DD LD G+ + GK +G D ++ K Sbjct: 210 IAAAMYMAGIDGEKEHANALKIL-MEMGEFFQVQDDYLDLFGDPSVTGK-VGTDIQDNKS 267 Query: 235 TLPVILAFQRGTKREKN 251 + V+ R + +++ Sbjct: 268 SWLVVQCLLRASPQQRQ 284 >gi|15289750|dbj|BAB16687.2| putative FPP synthase 1 [Eucommia ulmoides] Length = 348 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 27/204 (13%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-------------LVWGNQTSVLVGDF 112 +L IE++ L+ DD++D S RRG++ L+ N ++ Sbjct: 83 VLGWCIEWLQACALVLDDIMDSSHTRRGQMCWYKLPKVGMIAINDGLILRNHVPRILKKH 142 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL--SLSKNLDVTE---EDYLHVIKS 167 S+ + + E L+ V C G++ L +L +D++E + + S Sbjct: 143 FRSKPYYL-------ELLDLFHEVECQTVGGQMIDLITTLVGEIDLSEYSLPTHRQITVS 195 Query: 168 KTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KT+ F + + L+ G + +K + +G FQ+ DD LD G+ +GK IG Sbjct: 196 KTSYYSFYLPVACALLMTGEKLESHSGMKDILIEMGSYFQVQDDYLDCFGDPEVIGK-IG 254 Query: 227 EDFRNGKPTLPVILAFQRGTKREK 250 D + K T V+ A + + +K Sbjct: 255 SDIEDFKCTWLVVKALELCNEEQK 278 >gi|308801677|ref|XP_003078152.1| farnesyl pyrophosphate synthase (ISS) [Ostreococcus tauri] gi|116056603|emb|CAL52892.1| farnesyl pyrophosphate synthase (ISS) [Ostreococcus tauri] Length = 346 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 34/241 (14%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQ--------AF 118 IEF+ L+ DD++D+S RRG+ W Q V + D +L + + Sbjct: 85 CIEFLQAYFLVADDIMDESVTRRGQPC----WYRQPDVKMTAINDGILLEMMLYKCLKKY 140 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQL--------SLSKNLDVTEEDYLHVIKSKTA 170 C +E + +E V A G+L L LSK T E Y+ ++ KTA Sbjct: 141 CKGLEC-YHDLVELFHDVTYQTASGQLIDLITAPIGIVDLSK---YTMEAYMRIVTYKTA 196 Query: 171 VL-FSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 F + + GV++ + + LG FQ+ DD LD G+ +GK IG D Sbjct: 197 FYTFYLPAACAMRLCGVKDEAAYSKANEICIKLGQFFQIQDDYLDCYGDPAVIGK-IGTD 255 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288 ++ K V+ A + ++ + E KA + + ++T Y+ Y Sbjct: 256 IQDNKCGWLVVQALLKCNDEQRKIIEENYGRADAECEKKIKALYVELD----LETTYKKY 311 Query: 289 S 289 Sbjct: 312 E 312 >gi|258574603|ref|XP_002541483.1| predicted protein [Uncinocarpus reesii 1704] gi|237901749|gb|EEP76150.1| predicted protein [Uncinocarpus reesii 1704] Length = 290 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 4/173 (2%) Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +L+ DDV DDS LRRG AA +V+G ++ + L + + + + ++ + + Sbjct: 41 SLMLDDVQDDSELRRGSPAAHVVYGRSQTINSAIYSLMKVADRLGQLQDEKCRDIFYEES 100 Query: 138 CTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALE-VSSLIAGVQNSVRQALK 195 L G+ L +++ ++Y+ ++ +KT F V + A NSV L Sbjct: 101 RNLCVGQGLDLHWRQHVQCPSIQEYITMVDNKTGSFFRLVTRLVVAETAEPPNSVN--LF 158 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + LG +Q+ DD + E K +D GK +LP+I Q + Sbjct: 159 QFITLLGRYYQIRDDYQNLASEEYTTKKGFCDDLSEGKFSLPMIHFLQNAPSK 211 >gi|321473073|gb|EFX84041.1| hypothetical protein DAPPUDRAFT_99962 [Daphnia pulex] Length = 331 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/231 (22%), Positives = 100/231 (43%), Gaps = 18/231 (7%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGKR--LRPMLTLATALMLEYRGDNHVL-----LACAIE 72 LK + + VK L+ K R +L L + +++ + +L LA E Sbjct: 77 LKNLIKTGHPLTSTVKELLNPKAKNDLTRGLLVLLVSKAGKHKANEDILPNQRKLAEITE 136 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 IHTA ++H +++ + L GN+ ++L GDF+ S++ + E K+ + +E Sbjct: 137 QIHTAHIIHTGIINLATPNE-----NLEMGNKMAILCGDFIQSRSSIQLAELKNIKIIEL 191 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + E LD+ + K + L S A + S+LI G + + Sbjct: 192 FGQAIADFSAVEFINEDTYCALDL----WTQKTKMRYGTLLSNACQ-STLILGGNMDLLE 246 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + K++G+ + A+Q D+ Y+ + N+ + F G P ++L F+ Sbjct: 247 SAKNFGLEIAFAWQANIDLQSYKSTTKKAEHNLAKLFP-GTPFEEILLIFE 296 >gi|203582|gb|AAA40960.1| cholesterol-regulated protein CR39 [Rattus norvegicus] Length = 344 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 68/285 (23%), Positives = 120/285 (42%), Gaps = 43/285 (15%) Query: 5 EDLTLKDMEKVNFL-----ILKRICSD----------VEMIPDVVKYLIFSGGKRLRPML 49 + L + + EK NF+ I+K + D + I +V++Y GGK R + Sbjct: 5 QKLDVHNQEKQNFIQHFSQIVKVLTEDELGHPEKGDAITRIKEVLEYNTV-GGKYNRGLT 63 Query: 50 TLAT--ALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102 + T L+ + D L + +E + L+ DD++D S RRG++ G Sbjct: 64 VVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDIMDSSYTRRGQICWYQKPG 123 Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV------ 156 + LL A +++ +E L+L+ L Q + + LD+ Sbjct: 124 IGLDAINDALLLEAAIYRLLKFYCREQPYYLNLLELFLQSS--YQTEIGQTLDLITAPQG 181 Query: 157 -------TEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQ 206 TE+ Y ++K KTA F + + +AG+ ALK + +G FQ Sbjct: 182 QVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKIL-LEMGEFFQ 240 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + DD LD G+ + GK +G D ++ K + V+ R T +++ Sbjct: 241 IQDDYLDLFGDPSVTGK-VGTDIQDNKCSWLVVQCLLRATPQQRQ 284 >gi|25058280|gb|AAH39906.1| Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens] Length = 399 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 34/271 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IH A L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT--------AVLFSAAL 177 + + +E L+ L +G + S SK +T++ + K +T A AA+ Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAM 267 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNGKPT 235 E++ A VQN Q YG ++ ++ ++ DV + E + M N+ + Sbjct: 268 ELAKHDAEVQNMAFQ----YGKHMAMSHKINSDVQPFIKEKTSDSMTFNLN--------S 315 Query: 236 LPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 PV+L Q R+ W I + G++ L++ + + +D +G Sbjct: 316 APVVL-HQEFLGRD--LWIKQIREAQEKGRLDYAKLRERIKAGKGVTSAIDL---CRYHG 369 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 370 NKALEALESFPPSEARSALENIV-FAVTRFS 399 >gi|321466396|gb|EFX77392.1| hypothetical protein DAPPUDRAFT_305827 [Daphnia pulex] Length = 298 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 16/220 (7%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 S E++ YL+ GK++R L+LA L + ++ ++ +H A+LL Sbjct: 22 SQDEILLQPFTYLLQVQGKQIRVKLSLAFDYWLHINPEKLNIINDVVQMLHNASLL---- 77 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 RG A ++G +++ +++ V+ +A E L G+ Sbjct: 78 -------RGIPVAHSIYGVASTINSANYVYFLGLEKVLGLNHPQATEVFCEQLLELHRGQ 130 Query: 145 LRQLSLSKN-LDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 ++ + + TEE+Y +I KT LF A+ + L + + + LG+ Sbjct: 131 GMEIYWRDSYVCPTEEEYRLMIVRKTGGLFGLAVRLMQLFSTTTIDMNPLMAI----LGL 186 Query: 204 AFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 FQ+ DD + + K+ ED GK + PVI A + Sbjct: 187 YFQIRDDYANLNLKEYAENKSFCEDLTEGKFSFPVIHAIR 226 >gi|194884015|ref|XP_001976091.1| GG22668 [Drosophila erecta] gi|190659278|gb|EDV56491.1| GG22668 [Drosophila erecta] Length = 419 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 27/202 (13%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 L +E + + ++ DDV+D+S RRG+ + + + ++ A +++ Sbjct: 157 LGWCVEMLQSFFIISDDVMDNSITRRGQPCWHKLENVGMTAINDSLMIENAMYAILK--- 213 Query: 127 QEALEALSLVACTLAEGELRQ-----LSLSKNLDV----------TEEDYLHVIKSKTAV 171 + S + C +A EL + ++LD+ T E+Y ++++KTA Sbjct: 214 ----KHFSHLDCYVALMELFHEITFITTCGQSLDLLHSNRSVSEFTMENYKAIVENKTAY 269 Query: 172 L-FSAALEVSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 F ++ +AG ++ + RQ+ K+ + +G FQ+ DD LD G GK IG D Sbjct: 270 YSFYLPFALALHLAGYKDAEAFRQS-KTILLEMGNFFQVQDDFLDCFGNPEVTGK-IGTD 327 Query: 229 FRNGKPTLPVILAFQRGTKREK 250 ++ K + ++A QR +K Sbjct: 328 IQDNKCSWLAVVAMQRANVEQK 349 >gi|321473075|gb|EFX84043.1| hypothetical protein DAPPUDRAFT_194691 [Daphnia pulex] Length = 336 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/231 (22%), Positives = 104/231 (45%), Gaps = 14/231 (6%) Query: 20 LKRICSDVEMIPDVVKYLIFSGGK--RLRPMLTLATALMLEYRGDNHVL-----LACAIE 72 LK++ + D K L++S K + R +L L + + +L LA + Sbjct: 78 LKKLIGTGHPLLDTAKNLMYSQDKTNQTRGLLVLLVSKAAKIDQTQDILPKQRTLAEITD 137 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 +H A L+H V++ + L GN+ +VL GDFLL+++ ++ ++ + +E Sbjct: 138 LVHAAHLIHTGVINLNTPNES-----LEMGNKMAVLCGDFLLARSCVLLANLQNLKVVEL 192 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 ++ + E + ++ D + + + K + L + A + SSLI G + + Sbjct: 193 IAQAISDFSTAEFIDI-VANETDSALDRWRYQSKLRYGTLLAHACQ-SSLILGDNVDLVE 250 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 K +G+ + +A+Q +++ Y+ + + + F G P VI FQ Sbjct: 251 FGKYFGLEIALAWQANNEIQSYKNAKEKADHVLFKLFPPGTPFKEVISNFQ 301 >gi|295400761|ref|ZP_06810738.1| heptaprenyl diphosphate synthase related protein [Geobacillus thermoglucosidasius C56-YS93] gi|294977342|gb|EFG52943.1| heptaprenyl diphosphate synthase related protein [Geobacillus thermoglucosidasius C56-YS93] Length = 316 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 22/190 (11%) Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A AIE + AT + D++ D + ++ ++L G +V + + ++ +AF +++ Sbjct: 76 AAAIELLILATDIFDEISDHD--QSDEIISQLSIGE--TVTIANAIMMEAFRLILHNSKT 131 Query: 128 EALEALSLVACTL---AEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E +++ L G+ R L + V TEE+Y H+I+ K++ L E+S Sbjct: 132 DVYEKFAIIIHELQNACNGQWRDLHFVISEHVPTEEEYFHLIQQKSSSLVKLVCELSD-- 189 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + N + ++GIA QL +D D + + D N K TLP I A + Sbjct: 190 --IHN--QNIWGPIATDIGIAGQLKNDAKD-------ILSDDKSDLINQKATLPFIKAVE 238 Query: 244 RGTKREKNFW 253 +++ N W Sbjct: 239 YSIEKD-NEW 247 >gi|261884768|ref|ZP_06008807.1| geranyltranstransferase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 124 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 5/114 (4%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLAT--ALMLEYRGDNHVLLACAIEFIH 75 L L ++ S D + +++ +GGK R L L AL + + ++ + A A+E +H Sbjct: 9 LNLPKVDSFHPHFNDSLSWVLKAGGKHFRAKLLLGVVDALKPDLKSASYPV-AAAVEMLH 67 Query: 76 TATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 T +L+HDD+ +D++ LRRG + + ++VL GD L + A T Q Sbjct: 68 TYSLIHDDLPCMDNADLRRGVATLHVKYDEVSAVLAGDALNTHALIDSSATAEQ 121 >gi|18958450|gb|AAL82595.1|AF470318_1 farnesyl pyrophosphare synthase [Musa acuminata] Length = 357 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FL 113 D V L CA IE++ L+ DD++D+S RRG+ L W V V D L Sbjct: 84 DEEVFLGCALGWCIEWLQAYFLVLDDIMDNSHTRRGQ----LCWFRVPKVGLIAVNDGIL 139 Query: 114 LSQAFCMVIETKSQ------EALEALSLVACTLAEGELRQLSLS----KNLD-VTEEDYL 162 L +++ + + L+ + V A G++ L + K+L T Y Sbjct: 140 LRNHIPRILKRHFKGKPYYVDLLDLFNEVEFQTASGQMLDLITTHEGEKDLSKYTLPVYN 199 Query: 163 HVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 +++ KTA F + + L+AG +K+ + +G FQ+ DD LD G+ + Sbjct: 200 RIVQYKTAYYSFYLPVACALLMAGENLDTFVDVKNILVEMGTYFQVQDDFLDCFGDPEVI 259 Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKRE 249 GK IG D + K + V+ A QR + + Sbjct: 260 GK-IGTDIEDFKCSWLVVQALQRANENQ 286 >gi|75233327|sp|Q7XYT0|FPPS2_ARTSI RecName: Full=Farnesyl diphosphate synthase 2; Includes: RecName: Full=Dimethylallyltranstransferase; Includes: RecName: Full=(2E,6E)-farnesyl diphosphate synthase gi|32329197|gb|AAP74719.1| farnesyl diphosphate synthase [Artemisia spiciformis] Length = 342 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 35/237 (14%) Query: 40 SGGKRLRPMLTLATALML--EYRGDNHVLLACA----IEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + +L E ++ V LACA IE++ L+ DD++D+S RRG Sbjct: 45 PGGKLNRGLSVVDSYKLLKQEELTEDEVFLACALGWCIEWLQAYFLVLDDIMDESHTRRG 104 Query: 94 K-------------VAARLVWGNQTSVLVGDFLLSQAFC-----MVIETKSQEAL-EALS 134 + V +V N ++ +A+ + E + Q A + + Sbjct: 105 QPCWFRLPKVGMIAVNDGVVLRNHIPRILKKHFRGKAYYADLLDLFNEVEFQTASGQMID 164 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQA 193 L+ + EL + SLS + ++K KTA F + + L+ G Sbjct: 165 LITTLFGQKELSKYSLST--------HQRIVKFKTAYYSFYLPVACALLMFGENLDDHVQ 216 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +K + +G FQ+ DD LD G +GK IG D + K + V+ A + +++K Sbjct: 217 VKDVLVEMGTYFQVQDDYLDCFGSPEVIGK-IGTDIEDFKCSWLVVKALELADEQQK 272 >gi|19882207|ref|NP_608219.1| farnesyl pyrophosphate synthase [Mus musculus] gi|60392303|sp|Q920E5|FPPS_MOUSE RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Cholesterol-regulated 39 kDa protein; Short=CR 39; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|15824695|gb|AAL09445.1|AF309508_1 farnesyl pyrophosphate synthase [Mus musculus] gi|26353632|dbj|BAC40446.1| unnamed protein product [Mus musculus] gi|28913418|gb|AAH48497.1| Farnesyl diphosphate synthetase [Mus musculus] gi|71060057|emb|CAJ18572.1| Fdps [Mus musculus] gi|74207484|dbj|BAE39995.1| unnamed protein product [Mus musculus] gi|148683292|gb|EDL15239.1| mCG17543, isoform CRA_b [Mus musculus] Length = 353 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 20/197 (10%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL + +++ +E Sbjct: 92 VELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAINDALLLEASIYRLLKFYCREQP 151 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 152 YYLNLLELFLQSS--YQTEIGQTLDLMTAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLP 209 Query: 177 LEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + +AG+ ALK M +G FQ+ DD LD G+ + GK +G D ++ K Sbjct: 210 IAAAMYMAGIDGEKEHANALKIL-MEMGEFFQVQDDYLDLFGDPSVTGK-VGTDIQDNKC 267 Query: 235 TLPVILAFQRGTKREKN 251 + V+ R + +++ Sbjct: 268 SWLVVQCLLRASPQQRQ 284 >gi|242791472|ref|XP_002481764.1| farnesyl-pyrophosphate synthetase [Talaromyces stipitatus ATCC 10500] gi|218718352|gb|EED17772.1| farnesyl-pyrophosphate synthetase [Talaromyces stipitatus ATCC 10500] Length = 347 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 16/182 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET- 124 LL E + L+ DD++D S RRG+ G + F+L A ++++ Sbjct: 79 LLGWFTELLQAFFLVSDDIMDGSITRRGQPCWYRREGVGMIAINDAFMLESAIYVILKKY 138 Query: 125 -KSQEAL-EALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTAVLFS 174 +S A + L L T + EL QL + ++D+ E Y ++K KTA +S Sbjct: 139 FRSHPAYTDLLELFHETTWQTELGQLCDLITAPEDHVDLNNFSMEKYTFIVKYKTAY-YS 197 Query: 175 AALEVSSLIAGVQNSVRQALKSYG---MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L V+ + +Q + + LK + LG FQ+ DD LD G +GK IG D ++ Sbjct: 198 FYLPVTLALHYLQVATPKNLKQCEDILIPLGEYFQIQDDYLDAFGSPETIGK-IGTDIQD 256 Query: 232 GK 233 K Sbjct: 257 NK 258 >gi|58267962|ref|XP_571137.1| isoprenoid biosynthesis-related protein [Cryptococcus neoformans var. neoformans JEC21] gi|134112405|ref|XP_775178.1| hypothetical protein CNBE4510 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257830|gb|EAL20531.1| hypothetical protein CNBE4510 [Cryptococcus neoformans var. neoformans B-3501A] gi|57227371|gb|AAW43830.1| isoprenoid biosynthesis-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 374 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 24/232 (10%) Query: 40 SGGKRLRPMLTLATALMLEYRG------DNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R M + T +L+ R N +L +E + L+ DD++D S RRG Sbjct: 71 PGGKLNRGMSVVDTVEILKGRELSEEEYTNAAILGWCVELLQAYFLVADDIMDQSVTRRG 130 Query: 94 KVAARLVWGNQTSVLVGD-FLLSQAFCMVIET--KSQE-ALEALSLVACTLAEGELRQL- 148 + V N ++ + D F+L A +++ +SQ+ ++ + L T + EL QL Sbjct: 131 QPCWYRV-PNVGNIAINDAFMLEAAIYYLLKKHFRSQKYYVDLMELFLETTFQTELGQLV 189 Query: 149 ----SLSKNLDVT----EEDYLHVIKSKTAVLFSAALEVSSLIAGVQN--SVRQALKSYG 198 + ++D+ E+ +L V+ F + ++ ++GV++ + ALK Sbjct: 190 DLITAPEDHVDLNKFSLEKHHLIVVYKTAFYSFYLPVALAMHMSGVEDKAAFDLALKIL- 248 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + LG FQ+ DD LD G+ +GK IG D + K + V A T ++ Sbjct: 249 LPLGEYFQVQDDYLDCYGKPEHIGK-IGTDILDNKCSWNVNTALAHATPEQR 299 >gi|328768663|gb|EGF78709.1| hypothetical protein BATDEDRAFT_17386 [Batrachochytrium dendrobatidis JAM81] Length = 365 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 24/204 (11%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV----LVGDFLLSQAFCMV 121 +L IEF+ L+ DD++D S RRG+ W + +V + F++ A + Sbjct: 98 VLGWCIEFLQAFFLISDDIMDGSLTRRGQPC----WYKKENVGMVAINDSFIVEAAIYQM 153 Query: 122 IET--KSQEA----LEALSLVACTLAEGELRQLSLSKNLDV-----TEEDYLHVIKSKTA 170 ++ K+ A LE V G+L L + DV + E + ++++ KTA Sbjct: 154 LKKYFKTHPAYGDFLELFHEVTYQTELGQLMDLITAPEGDVDLDRFSIEKHAYIVEFKTA 213 Query: 171 VL-FSAALEVSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 F + ++ +AG+ + + QA + + LG FQ+ DD LD G +GK IG Sbjct: 214 YYSFYLPIALAMRLAGITEERAYIQA-RDVLLPLGEYFQVQDDYLDCYGTPETIGK-IGT 271 Query: 228 DFRNGKPTLPVILAFQRGTKREKN 251 D + K ++ A R + ++ Sbjct: 272 DIEDNKCGWLIVQALSRASPEQRT 295 >gi|225629764|ref|ZP_03787710.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591383|gb|EEH12477.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 76 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 4 LEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L+D+ D+ +N + K + D ++ D++ +L+ SGGK++RP L ML Y G+ Sbjct: 12 LDDIVSSDLSAMNDFVFKNVNDEDAKLAADIISHLVRSGGKKIRPKLVFIICKMLNYSGE 71 Query: 63 NHV 65 N + Sbjct: 72 NRI 74 >gi|67902050|ref|XP_681281.1| hypothetical protein AN8012.2 [Aspergillus nidulans FGSC A4] gi|40740444|gb|EAA59634.1| hypothetical protein AN8012.2 [Aspergillus nidulans FGSC A4] gi|259480763|tpe|CBF73703.1| TPA: polyprenyl synthetase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 347 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 18/224 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ET 124 L E + L+ DD++D S RRG+ G + FLL +++ + Sbjct: 80 LGWLTELLQAFFLVSDDLMDGSITRRGQPCWYRHQGVGLIAINDAFLLESGIYVILKKQF 139 Query: 125 KSQEA-LEALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTA---VL 172 +S A ++ + L T + EL QL + +D+ E Y+ ++ KTA Sbjct: 140 RSHPAYVDFIELFHETTWQTELGQLCDLITAPEDKVDLNNFSMEKYMFIVTYKTAYYSFY 199 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 AL + L ++RQA + LG FQ+ DD LD G+ +GK IG D ++ Sbjct: 200 LPVALALHYLQLATPENLRQA-HDILIPLGQYFQVQDDYLDAYGDPEVIGK-IGTDIQDN 257 Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 K + V A QR + ++ + G+ E K I RE Sbjct: 258 KCSWLVNQALQRCSAEQRKVLDAAY--GRKDAEQEAKVKAIFRE 299 >gi|294995849|ref|ZP_06801540.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis 210] Length = 126 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%) Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++ +G LG+AFQ VDD++ G+ GK +G D K TLPV+ A Sbjct: 1 MERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAAL 49 >gi|123505919|ref|XP_001329081.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3] gi|121912032|gb|EAY16858.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3] Length = 334 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 28/222 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQ--AFCMV 121 + +E + A L+ DD +D S RRG + W SV V D ++ + AF ++ Sbjct: 76 IGWVLELMQAAFLIADDFMDQSETRRGMIC----WYKIESVNEQAVNDAMIVENLAFVLL 131 Query: 122 IETKSQEALEALSLVACTLAEGELRQL----SLSKNLDVTE-----EDYLHVIKSKTAVL 172 +S+ +++ + + LR + ++ + LD E Y +++KT+ Sbjct: 132 DSVRSKLNIKSYARLV-----QYLRTINTITTMGQTLDFINKTKSFESYEVSVRNKTSHY 186 Query: 173 FSAALEVSSLIAGVQNSVR---QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 A + LIA + V ++++ + + LG FQ+ DD D G+ GK IG D Sbjct: 187 SLCAPIILGLIASQKFEVTDKFESIEKFALRLGYYFQVQDDYFDVYGDPQVTGK-IGSDI 245 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAF 271 ++GK T A++ +K I + VE++KK + Sbjct: 246 KDGKNTWLFCKAYELANDEQKKTLDQKIGHEEF-VEDIKKLY 286 >gi|74141499|dbj|BAE38529.1| unnamed protein product [Mus musculus] Length = 353 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 20/197 (10%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL + +++ +E Sbjct: 92 VELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAINDALLLEASIYRLLKFYCREQP 151 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 152 YYLNLLELFLQSS--YQTEIGQTLDLMTAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLP 209 Query: 177 LEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + +AG+ ALK M +G FQ+ DD LD G+ + GK +G D ++ K Sbjct: 210 IAAAMYMAGIDGEKEHANALKIL-MEMGEFFQVQDDYLDLFGDPSVTGK-VGTDIQDNKC 267 Query: 235 TLPVILAFQRGTKREKN 251 + V+ R + +++ Sbjct: 268 SWLVVQCLLRASPQQRQ 284 >gi|267847005|gb|ACY80695.1| farnesyl pyrophosphate synthase [Cyclocarya paliurus] Length = 342 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 113/254 (44%), Gaps = 38/254 (14%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQ 104 ++ + LACA IE++ L+ DD++D+S RRG+ V ++ N Sbjct: 69 NDEIFLACALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRLPKVGMIAVNDGIILRNH 128 Query: 105 TSVLVGDFLLSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTE 158 ++ + + + + + E + Q A + + L+ + E +L + SLS Sbjct: 129 IPRILKNHFREKNYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLS------- 181 Query: 159 EDYLH--VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 LH +++ KTA F + + L+AG +K+ + +G FQ+ DD LD Sbjct: 182 ---LHQRIVQYKTAYYSFYLPVACALLMAGENLENHINVKNILIEMGNYFQVQDDYLDCY 238 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE-KNFWKSTINDGKISVENLKKAFIIM 274 G +GK IG D + K + V+ A +R + + K +++ + V +K+ + ++ Sbjct: 239 GAPEVIGK-IGTDIEDFKCSWLVVKALERSNEEQLKILYENYGKADEACVAKVKELYKVL 297 Query: 275 RENRALVDTEYRAY 288 + E ++Y Sbjct: 298 DLESVFAEYESKSY 311 >gi|24796660|gb|AAN62522.1| farnesyl pyrophosphate synthetase [Eucommia ulmoides] Length = 319 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 27/204 (13%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-------------LVWGNQTSVLVGDF 112 +L +E++ L+ DD++D S RRG++ L+ N ++ Sbjct: 83 VLGWCVEWLQACALVLDDIMDSSHTRRGQMCWYKLPKVGMIAINDGLILRNHVPRILKKH 142 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL--SLSKNLDVTE---EDYLHVIKS 167 S+ + + E L+ V C G++ L +L +D++E + + S Sbjct: 143 FRSKPYYL-------ELLDLFHEVECQTVGGQMIDLITTLVGEIDLSEYSLPTHRQITVS 195 Query: 168 KTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KT+ F + + L+ G + +K + +G FQ+ DD LD G+ +GK IG Sbjct: 196 KTSYYSFYLPVACALLMTGEKLESHSGMKDILIEMGSYFQVQDDYLDCFGDPEVIGK-IG 254 Query: 227 EDFRNGKPTLPVILAFQRGTKREK 250 D + K T V+ A + + +K Sbjct: 255 SDIEDFKCTWLVVKALELCNEEQK 278 >gi|270008056|gb|EFA04504.1| hypothetical protein TcasGA2_TC014812 [Tribolium castaneum] Length = 393 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 53/283 (18%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 ++A E I T+ L+H +++ K + L +GN+ ++L GD+LLS +F V + K Sbjct: 129 IIAEVTEMIRTSHLIHKGLINLEP--HDKNFSDLNFGNKLALLSGDYLLSSSFNEVAKLK 186 Query: 126 SQEALEALSLVACTLAEGEL-------------RQLSLSKNLDVTEE------DYLHVIK 166 + E +S LAE E + L + +N+++ E HV+ Sbjct: 187 NFHVQETISSTLRDLAESEFIGLRNKHNEPIPSKPLPVQENINIPLEFGVKPFKLEHVLG 246 Query: 167 SKTA------VLFSAAL-----EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 + A VL +L + + ++A ++ V++ S+G NL +A+Q + Sbjct: 247 NMRAEWTLRNVLSGGSLLGKCCQCALILANHESRVQELGYSFGRNLALAWQAALE----- 301 Query: 216 GEVNEMGKNIGEDFRNGKPTL---PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 E FR K +L PV+L + + K K D +I+ + ++K Sbjct: 302 ----------KELFREEKFSLVSAPVMLHLETDSSFYKEIEKGLSEDHEINYDQVRK--- 348 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 I+ L T + ++A D+L P++ K +L+ +V+ Sbjct: 349 IVLGGPGLEKTAQLQSEFTEEALDTLDKFPNNESKVALVNIVN 391 >gi|74183868|dbj|BAE24508.1| unnamed protein product [Mus musculus] Length = 353 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 20/197 (10%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL + +++ +E Sbjct: 92 VELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAINDALLLEASIYRLLKFYCREQP 151 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL-FSAA 176 L+L+ L Q + + LD+ TE+ Y ++K KTA F Sbjct: 152 YYLNLLELFLQSS--YQTEIGQTLDLMTAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLP 209 Query: 177 LEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + +AG+ ALK M +G FQ+ DD LD G+ + GK +G D ++ K Sbjct: 210 IAAAMYMAGIDGEKEHANALKIL-MEMGEFFQVQDDYLDLFGDPSVTGK-VGTDIQDNKC 267 Query: 235 TLPVILAFQRGTKREKN 251 + V+ R + +++ Sbjct: 268 SWLVVQCLLRASPQQRQ 284 >gi|300766618|ref|ZP_07076535.1| polyprenyl synthetase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300495718|gb|EFK30869.1| polyprenyl synthetase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 167 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 E L K++ + + + D I D V L+ +GGK LRP L ++ D++ Sbjct: 50 ESLVAKELAALKPYLATNVKIDNAAINDRVHDLLAAGGKFLRPGFFY---LFSQFGPDHN 106 Query: 65 VLL----ACAIEFIHTATLLHDDVVDDSALRR 92 A A+E +H ATL+HDDV+D+S RR Sbjct: 107 TARLRAGAAAMELLHVATLIHDDVIDESPERR 138 >gi|195624442|gb|ACG34051.1| farnesyl pyrophosphate synthetase [Zea mays] Length = 355 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 29/208 (13%) Query: 66 LLACA----IEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTS-V 107 LAC IE++ L+ DD++D+S RRG+ V ++ N S + Sbjct: 86 FLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRI 145 Query: 108 LVGDFLLSQAFCMVIETKSQEALEALS---LVACTLAEGELRQLSLSKNLDVTEEDYLHV 164 L F + VI+ ++ + S L T EGE + L+ NL V H+ Sbjct: 146 LQRHFKGKPYYVDVIDLFNEVEFKTASGQMLDLITTHEGE-KDLT-KYNLTVRR----HI 199 Query: 165 IKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 ++ KTA F + + L+AG +K+ + +G FQ+ DD LD G+ +GK Sbjct: 200 VQYKTAYYSFYLPVACALLLAGENLDNFGDVKNILVEMGTYFQVQDDYLDCFGDPKFIGK 259 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKN 251 IG D + K + V+ A +R +++K+ Sbjct: 260 -IGTDIEDYKCSWLVVQALERADEKQKS 286 >gi|294882140|ref|XP_002769627.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC 50983] gi|239873179|gb|EER02345.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC 50983] Length = 377 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 21/250 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IET 124 LA +E + + L DDV+D S+ RRGK G ++ G FL S + + I + Sbjct: 103 LAWCVEILQSHFLTLDDVMDSSSTRRGKPCWYTKVGVSNAINDGAFLYSTIYPFIRNIAS 162 Query: 125 KSQEALEALSLVA----CTLAEGELR---QLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + L+ + + A CTL L + + D + + T L+ A Sbjct: 163 HKEWLLDVIDIFAHIEQCTLIGQHLDVNGGMQQQQQQDSEHNKEKEIERFNTIALYKTAF 222 Query: 178 EVSSLIAGV-------QNSVR--QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 L A V +++V+ +K + LG+ FQ DD LD +GK IG D Sbjct: 223 YTYYLPASVGVFASDDKDAVKYLPLIKDVCLKLGVYFQAQDDFLDCYASPEVLGK-IGTD 281 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAY 288 K + A T N + SV+++++ I R + +D E R Sbjct: 282 IEECKASWLYCTAIDVLTMDNNNKLYTLYKKDDKSVDDVERVKAIYRS--SPLDMEKRFM 339 Query: 289 SYGQKAKDSL 298 Y +++K L Sbjct: 340 IYEEESKKEL 349 >gi|7108625|gb|AAF36504.1|AF130462_1 heptaprenyl diphosphate synthetase [Corynebacterium glutamicum] Length = 114 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 7/118 (5%) Query: 208 VDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK---REKNFWKSTINDGKISV 264 VDD++D E +E GK G D R G TLPV+ A + T ++ + D + +V Sbjct: 1 VDDIIDIFSETHESGKTPGTDLREGVFTLPVLYALREDTPVGAELRDILTGPLEDDE-TV 59 Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 ++ + +A +D YR Y A L LPDS+ K++L + F ++R+ Sbjct: 60 NHVLELLSQSGGRQAALDEVYR---YMDIANAELDRLPDSTVKEALRNLATFTVKRVG 114 >gi|189238015|ref|XP_970186.2| PREDICTED: similar to AGAP006016-PA [Tribolium castaneum] Length = 401 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 53/283 (18%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 ++A E I T+ L+H +++ K + L +GN+ ++L GD+LLS +F V + K Sbjct: 129 IIAEVTEMIRTSHLIHKGLINLEP--HDKNFSDLNFGNKLALLSGDYLLSSSFNEVAKLK 186 Query: 126 SQEALEALSLVACTLAEGEL-------------RQLSLSKNLDVTEE------DYLHVIK 166 + E +S LAE E + L + +N+++ E HV+ Sbjct: 187 NFHVQETISSTLRDLAESEFIGLRNKHNEPIPSKPLPVQENINIPLEFGVKPFKLEHVLG 246 Query: 167 SKTA------VLFSAAL-----EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 + A VL +L + + ++A ++ V++ S+G NL +A+Q + Sbjct: 247 NMRAEWTLRNVLSGGSLLGKCCQCALILANHESRVQELGYSFGRNLALAWQAALE----- 301 Query: 216 GEVNEMGKNIGEDFRNGKPTL---PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 E FR K +L PV+L + + K K D +I+ + ++K Sbjct: 302 ----------KELFREEKFSLVSAPVMLHLETDSSFYKEIEKGLSEDHEINYDQVRK--- 348 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 I+ L T + ++A D+L P++ K +L+ +V+ Sbjct: 349 IVLGGPGLEKTAQLQSEFTEEALDTLDKFPNNESKVALVNIVN 391 >gi|209877823|ref|XP_002140353.1| polyprenyl synthetase family protein [Cryptosporidium muris RN66] gi|209555959|gb|EEA06004.1| polyprenyl synthetase family protein [Cryptosporidium muris RN66] Length = 340 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 35/226 (15%) Query: 41 GGKRLRPMLTLATALMLEYRGD----NHVLLA-CAIEFIHTATLLHDDVVDDSALRRGKV 95 GGK +R + + A GD + VL A IE + L+ DD++D +RRGKV Sbjct: 50 GGKYMRGITLVEVAYKCWNNGDKILWDEVLTAGWCIEILQAFFLVGDDIMDGGEMRRGKV 109 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALEALS----------LVACTLAEG 143 W + +G L+ +FC+ I E + AL++ S L C Sbjct: 110 C----WYISQGLSMG---LNDSFCLYIMSELLMKGALKSYSMDTLARIMDLLHRCIFYTI 162 Query: 144 ELRQLSLS----KNLDVTEEDYLHVIKSKTAVLFSAALE--VSSLIAGVQNSVRQALKSY 197 + L S K+ + +E Y +I+ KT+ +S L + L+A + + ++ + Sbjct: 163 LGQHLDTSPLCLKSTENLDERYFAMIQMKTSY-YSIYLPICIGLLLANSTSGIPLEVEHF 221 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G Q+ +D LDY G + G D GK T + A Q Sbjct: 222 SRIIGEYLQIENDFLDYFGN----NEKTGNDIEQGKLTWLLCKAMQ 263 >gi|321259617|ref|XP_003194529.1| isoprenoid biosynthesis-related protein [Cryptococcus gattii WM276] gi|317461000|gb|ADV22742.1| Isoprenoid biosynthesis-related protein, putative [Cryptococcus gattii WM276] Length = 374 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 24/232 (10%) Query: 40 SGGKRLRPMLTLATALMLEYRG------DNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R M + T +L+ R N +L +E + L+ DD++D S RRG Sbjct: 71 PGGKLNRGMSLVDTVEILKGRELSEEEYTNAAILGWCVELLQAYFLVADDIMDQSVTRRG 130 Query: 94 KVAARLVWGNQTSVLVGD-FLLSQAFCMVIET--KSQE-ALEALSLVACTLAEGELRQL- 148 + V N ++ + D F+L A +++ +SQ+ ++ + L T + EL QL Sbjct: 131 QPCWYRV-PNVGNIAINDAFMLEAAIYYLLKKHFRSQKYYVDLMELFLETTFQTELGQLV 189 Query: 149 ----SLSKNLDVT----EEDYLHVIKSKTAVLFSAALEVSSLIAGVQN--SVRQALKSYG 198 + ++D+ E+ +L V+ F + ++ ++GV++ + ALK Sbjct: 190 DLITAPEDHVDLNKFSLEKHHLIVVYKTAFYSFYLPVALAMHMSGVEDKAAFDLALKIL- 248 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + LG FQ+ DD LD G+ +GK IG D + K + V A T ++ Sbjct: 249 LPLGEYFQVQDDYLDCYGKPEHIGK-IGTDILDNKCSWNVNTALAHATPEQR 299 >gi|294898818|ref|XP_002776390.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC 50983] gi|239883328|gb|EER08206.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC 50983] Length = 365 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 37/222 (16%) Query: 41 GGKRLRPMLTLAT--ALMLEYRGDNHVLLACAI----EFIHTATLLHDDVVDDSALRRGK 94 GGK R + T+AT AL +YR HV A AI EF+ + L+ DDV+D S RRG Sbjct: 93 GGKMTRGLTTVATYVALCGDYR--EHVKDAAAIGWSAEFLQASFLMFDDVMDQSETRRGS 150 Query: 95 VA----ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSL 150 + N + +V F+ + + ++IE+ +A L+++ L + + Sbjct: 151 TCWYRLPEISMPNSLNDVV--FIENAVYTLLIESTGFDADIKLAII--RLCHDITLRTII 206 Query: 151 SKNLDV---------------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV----R 191 ++LD+ T E Y KTA +S L V+ +A + S+ Sbjct: 207 GQHLDLNSVRPDDYTVDLSRYTMERYWATTAYKTA-YYSFWLPVALGMAMARFSLDDPDY 265 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + K + LG FQ DD LD G+ +GK +G D + K Sbjct: 266 KGTKDACILLGNFFQAQDDFLDVFGDPEAIGK-VGTDIKESK 306 >gi|224284882|gb|ACN40171.1| unknown [Picea sitchensis] Length = 347 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 22/230 (9%) Query: 40 SGGKRLRPMLTLATALMLEYR---GDNHVLLAC----AIEFIHTATLLHDDVVDDSALRR 92 GGK R M + + +L+ ++ V L C IE++ L+ DD++D S RR Sbjct: 49 PGGKLNRGMSVIDSYRLLKAGKEISEDEVFLGCVLGWCIEWLQAYFLILDDIMDSSHTRR 108 Query: 93 GKVAA-RLVWGNQTSVLVGDFLLSQAFCMVIE----TKSQ--EALEALSLVACTLAEGEL 145 G+ RL +V G LL C +++ TK + L+ + V A G+L Sbjct: 109 GQPCWFRLPKVGLIAVNDG-ILLRNHICRILKKHFRTKPYYVDLLDLFNEVEFQTASGQL 167 Query: 146 RQLSLSKN--LDVTE---EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGM 199 L + D+++ Y+ +++ KTA F + + ++AG +K+ + Sbjct: 168 LDLITTHEGATDLSKYKMPTYVRIVQYKTAYYSFYLPVACALVMAGEILDNHVDVKNILV 227 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +G FQ+ DD LD G+ +GK IG D + K + V+ A +R + + Sbjct: 228 EMGTYFQVQDDYLDCFGDPEVIGK-IGTDIEDFKCSWLVVQALERANESQ 276 >gi|326490349|dbj|BAJ84838.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326510595|dbj|BAJ87514.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 408 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 34/244 (13%) Query: 42 GKRLRPMLTLATALMLEYRG----DNHVLLAC----AIEFIHTATLLHDDVVDDSALRRG 93 G +L L++ + ML G D LAC IE++ + L+ DD+ D++ RR Sbjct: 111 GGKLNRGLSVIDSYMLLREGTEVDDEDFYLACVLGWCIEWLQASALVLDDITDNAYTRRD 170 Query: 94 KVAARLVWGNQTSV---LVGDFLLSQAFCMVIETKS-------QEALEALSLVACTLAEG 143 L W +V + D +L + I + E +E + + A G Sbjct: 171 N----LCWYKLPTVGLSAINDGVLLKCHVQAIIKRYFKEKFYFMELMELWNEIGLQTAMG 226 Query: 144 ELRQL----SLSKNLDVTE-EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSY 197 ++ L + +K+L + Y ++K KT+ F + + L+ G + S LK+ Sbjct: 227 QMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNV 286 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE-----KNF 252 + +G+ FQ+ DD LD G+ +GK +G D + K + ++ A + + E +N+ Sbjct: 287 LIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQAMELANENEMKILYENY 345 Query: 253 WKST 256 KS+ Sbjct: 346 GKSS 349 >gi|218659538|ref|ZP_03515468.1| octaprenyl-diphosphate synthase protein [Rhizobium etli IE4771] Length = 30 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 17/29 (58%), Positives = 25/29 (86%) Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 A+D+L LPD+ WK +LMEV+DFC++R+N Sbjct: 2 ARDALAPLPDTMWKSALMEVIDFCIERVN 30 >gi|303312145|ref|XP_003066084.1| pyrophosphate synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105746|gb|EER23939.1| pyrophosphate synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|320040065|gb|EFW21999.1| geranylgeranyl pyrophosphate synthetase [Coccidioides posadasii str. Silveira] Length = 467 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 4/176 (2%) Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 +L+ DD+ D S LRRG AA +++G ++ ++L +A + K++E + Sbjct: 215 SLMLDDIQDGSELRRGFPAAHVIYGCSQTINSSTYILVKAVERLQRLKNEECRVVFYEES 274 Query: 138 CTLAEGELRQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA-LK 195 L G+ L ++ +DY+ ++ +KT F A + ++A +S A L Sbjct: 275 RNLCVGQGFDLYWRHHVQCPSVDDYITMVDNKTGSFFRLATRL--MVAAAPSSFGSAELF 332 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +G +Q+ DD + + K +D GK +LP+I Q ++ + Sbjct: 333 QLVSLMGRYYQIRDDYQNLASDEYAAKKGFCDDLSEGKFSLPLIHFLQHAPSQKAD 388 >gi|170044366|ref|XP_001849821.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167867553|gb|EDS30936.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 64 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 28/42 (66%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL 108 +A E IHTA+L+HDDV+D S RRGK + ++W ++ L Sbjct: 17 IAMISEMIHTASLVHDDVIDQSFARRGKPSVNVIWNHKKYTL 58 >gi|170595477|ref|XP_001902397.1| Polyprenyl synthetase family protein [Brugia malayi] gi|158589952|gb|EDP28754.1| Polyprenyl synthetase family protein [Brugia malayi] Length = 334 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 60/270 (22%), Positives = 109/270 (40%), Gaps = 10/270 (3%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGK R +L + L R D + +A +E + + L+ DDV+D+ RRGK Sbjct: 47 GGKYKRSILLVEAYKALGGRQDEERMKMVTNIAACLELLQSFFLIEDDVMDEGVNRRGKP 106 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETK--SQEALEALSLVACTLAEGELRQLSLSKN 153 + G + + LL ++ + S + +A G++ Sbjct: 107 CWHRLEGIGINGINDGLLLDCMVSYILRSNRVSADVRDAFDEARRVTILGQILDGDTKSV 166 Query: 154 LDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVL 212 D T + + + + KT+ + L++++L+ Q + + +K LG FQ DD + Sbjct: 167 EDCTWQRHQSITQHKTSHYTYFTPLQIAALLTA-QPLIIEPVKRIAYLLGYLFQSKDDYM 225 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 D G+ + GK +G D R K T A ++ T + + GK S+ + +K Sbjct: 226 DCFGDKSITGK-VGNDLREAKCTWVTCKAMEKLTHQPSFLTDFQEHFGKRSITSEQKLKD 284 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 I+ R D Y + +S+ P Sbjct: 285 ILTHLRVADDFHLFRERYAGEILNSIDHFP 314 >gi|14625002|dbj|BAB61881.1| farnesyl diphosphate synthase [Agrobacterium ferrugineum] Length = 141 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%) Query: 81 HDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 HDD+ +D+ LRRG W +VL GD L + +F ++ T + L+L++ Sbjct: 1 HDDMPAMDNDDLRRGLPTVHRKWDEGVAVLAGDALQTLSFELL--TDATLGPNRLALISS 58 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVI---------KSKTAVLFSAALEVSSLIAGVQNS 189 R + L + D+ E + KT LF + ++AG Sbjct: 59 MARAAGARGMVLGQARDIAAETAATPLTLPQITRLQAGKTGALFEWSATAGPVLAGADTG 118 Query: 190 VRQALKSYGMNLGIAFQLVDDVLD 213 L + +G+AFQ+ DD+LD Sbjct: 119 ---PLGRFAAAIGLAFQIADDILD 139 >gi|62959207|gb|AAY23711.1| farnesyl diphosphate synthase [Roseobacter sp. JL-135] Length = 144 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 21/138 (15%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI--ETKSQEALE---ALSLVACTLAEGE 144 LRRG W T+VLVGD L + F +V+ E A+ ALSL A+G Sbjct: 12 LRRGLPTVHKKWDEGTAVLVGDALQTLGFELVLSPECHPDPAVRTDLALSLAKAVGAKG- 70 Query: 145 LRQLSLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 + L + LD+ E + + + KT L + E + +A + L Sbjct: 71 ---MVLGQALDIAAETADQPLTLDEIIALQNGKTGALIRWSAEAGARLAQADAA---PLT 124 Query: 196 SYGMNLGIAFQLVDDVLD 213 +Y LG+AFQ+ DD+LD Sbjct: 125 AYADALGLAFQIADDILD 142 >gi|317143053|ref|XP_001818809.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40] Length = 384 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 49/226 (21%), Positives = 92/226 (40%), Gaps = 22/226 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 +D + + Y+ K +R A LE + + I +H ++L+ DD+ Sbjct: 86 TDYKAVKAPYNYINTLPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDI 145 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 D+S RRG A ++G VG + S + V + + L++ + + + + Sbjct: 146 EDNSVPRRGSPTAHTLFG------VGQTINSANYTFVCAFEELQKLQSPNAIGVFIE--Q 197 Query: 145 LRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL- 194 L+ L + LD+ T ++Y+ +I KT F + L+ G + + + Sbjct: 198 LKNLHCGQGLDLYWKYNTHVPTADEYMTMIDHKTGGPFRLCVR---LMQGESSGKTEHID 254 Query: 195 -KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + LG FQ+ DD + K ED GK + P+I Sbjct: 255 ARRFVTLLGRYFQIRDDYQNLTSAEYTSQKGFWEDLDEGKSSWPLI 300 >gi|322704302|gb|EFY95899.1| farnesyl pyrophosphate synthetase 1 [Metarhizium anisopliae ARSEF 23] Length = 379 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 25/203 (12%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDF-LLSQAFCMV 121 +LA +E + L+ DD++DDS RRG+ W Q + + D +L + Sbjct: 77 VLAWLVEMLGAHYLILDDIMDDSTTRRGEP----CWYRQPQIGLMAINDACILKSTIFFL 132 Query: 122 IETKSQEALEALSLVACTLAEG---ELRQ---LSLSKNLDV---TEEDYLHVIKSKTAVL 172 ++T ++ ++V + G EL Q L+ ++ D+ T E Y ++K K++ Sbjct: 133 LKTFFRQHPAYTNMVDLFVDNGLHTELGQLCDLAAAREPDIANFTMEQYWAIVKDKSSYS 192 Query: 173 FSA----ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 S ALE L ++RQ + + + LG FQ+ DD +D G+ GK+ G D Sbjct: 193 ISGPVTLALEYWQL--ATPKNLRQT-RDFSVALGEYFQVNDDYVDVFGDYAVTGKH-GTD 248 Query: 229 FRNGKPTLPVILAFQRGTKREKN 251 ++ K T +I A R ++ Sbjct: 249 IQDNKCTWFIIEALSRANDAQRQ 271 >gi|168203179|gb|ACA21460.1| farnesyl diphosphate synthase 4 [Picea abies] Length = 347 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 19/205 (9%) Query: 62 DNHVLLAC----AIEFIHTATLLHDDVVDDSALRRGKVAA-RLVWGNQTSVLVGDFLLSQ 116 ++ V L C IE++ L+ DD++D S RRG+ RL +V G LL Sbjct: 74 EDEVFLGCVLGWCIEWLQAYFLILDDIMDSSHTRRGQPCWFRLPKVGLIAVNDG-ILLRN 132 Query: 117 AFCMVIE----TKSQ--EALEALSLVACTLAEGELRQLSLSKN--LDVTE---EDYLHVI 165 C +++ TK + L+ + V A G+L L + D+++ Y+ ++ Sbjct: 133 HICRILKKHFRTKPYYVDLLDLFNEVEFQTASGQLLDLITTHEGATDLSKYKMPTYVRIV 192 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + ++AG +K+ + +G FQ+ DD LD G+ +GK Sbjct: 193 QYKTAYYSFYLPVACALVMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFGDPEVIGK- 251 Query: 225 IGEDFRNGKPTLPVILAFQRGTKRE 249 IG D + K + V+ A +R + + Sbjct: 252 IGTDIEDFKCSWLVVQALERANESQ 276 >gi|134075547|emb|CAK45077.1| unnamed protein product [Aspergillus niger] Length = 368 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 22/179 (12%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWG--------NQTSVLVGDFLLSQAFCMV 121 A+ + TA+LL D+ D S LRR + V+G N T LV + V Sbjct: 123 AVNLLLTASLLIGDIEDGSLLRRRQPVTHKVFGVAQTINSANHTYFLVQQCVQQLGNPQV 182 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDV-TEEDYLHVIKSKTAVLFSAALEVS 180 +E ++E L L G+ L + L TEE+YL +I ++T LF A + Sbjct: 183 VEIFTEELL--------NLHRGQGMDLFWRETLICPTEEEYLDMISNRTGRLFRLA--IR 232 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 L A S+R + + +G+ F++ DD + K + ED GK + P+I Sbjct: 233 PLQA---ESLRTSFCALVGLIGLIFRIQDDFKNLWSGAYTTNKGLCEDITLGKFSFPII 288 >gi|61744001|gb|AAX55631.1| farnesyl diphosphate synthase [Ips pini] Length = 433 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 23/232 (9%) Query: 40 SGGKRLRPMLTLATALMLEYRGD-------NHVLLACAIEFIHTATLLHDDVVDDSALRR 92 GK+ R ++T++T MLE +L IE +HT L+ DD++D S RR Sbjct: 135 PNGKKTRGLITISTYKMLEDPAKITTENLKKAGILGWCIEMLHTYFLIIDDIIDHSDTRR 194 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA------LEALSLVACTLAEGE-L 145 G + G + + ++ ++++ ++ +E +A + G+ L Sbjct: 195 GAICWYRQPGIGLTAVYDAVMMENGVYLLLKRHFKDHPMYTNIIELFHDMALKTSLGQSL 254 Query: 146 RQLSLSKN----LDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNS--VRQALKSYG 198 + L+ + LD+ E ++ KT+ F + + + G+ + RQA ++ Sbjct: 255 DTMCLNDDGKPKLDIHNEQDTSIVNYKTSYYSFYLPVAAAMYLLGMDDPEQHRQA-RTIL 313 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +++G FQ+ DD LD G+ N GK +G D ++GK + ++A QR T ++ Sbjct: 314 LDMGQFFQIQDDFLDCFGDPNVTGK-LGTDIQDGKCSWLAVMALQRSTPAQR 364 >gi|302654819|ref|XP_003019208.1| hypothetical protein TRV_06757 [Trichophyton verrucosum HKI 0517] gi|291182916|gb|EFE38563.1| hypothetical protein TRV_06757 [Trichophyton verrucosum HKI 0517] Length = 347 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 22/231 (9%) Query: 40 SGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R + TAL L E + + LL E + L+ DD++D S RRG Sbjct: 47 PGGKLNRGLSVPDTALALLEKPLTEEQFKHLGLLGWMTELLQAFFLVSDDIMDSSITRRG 106 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEA-LEALSLVACTLAEGELRQL-- 148 + G + F+L + ++++ +S A ++ + L + EL QL Sbjct: 107 EPCWYRRPGVGMIAINDAFMLESSIYVLLKKHFRSHPAYIDLVELFHEITFQTELGQLCD 166 Query: 149 ---SLSKNLDVTE---EDYLHVIKSKTA---VLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + N+D+ + + ++ KTA AL + L N++RQA + Sbjct: 167 LITAPEDNVDLNNFNMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPNNLRQA-HDILI 225 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LG FQ DD LD G+ ++GK IG D ++ K + V A +R T ++ Sbjct: 226 PLGQYFQAQDDYLDVFGKPEQIGK-IGTDIQDNKCSWVVNQALKRCTPAQR 275 >gi|260945739|ref|XP_002617167.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238849021|gb|EEQ38485.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 374 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 32/190 (16%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +L AIE + L+ DD++D S RRG+ LV G + F+L A ++++ Sbjct: 106 ILGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLVEGVGNIAINDSFMLEGAIYVLLKKH 165 Query: 126 SQE---ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV-------IKSKTAVLFSA 175 ++ ++ L L + EL QL LD+ D HV K V+F Sbjct: 166 FRQDPYYVDLLDLFHEVTFQTELGQL-----LDLVTADEEHVDLDKFSLAKHSFIVIFKT 220 Query: 176 A-------LEVSSLIAGVQN-----SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 A + ++ + G+ + VR L + LG FQ+ DD LD G ++GK Sbjct: 221 AYYSFYLPVALAMFMCGINSEQDLKQVRDIL----IPLGEYFQIQDDYLDCFGTPEQIGK 276 Query: 224 NIGEDFRNGK 233 IG D ++ K Sbjct: 277 -IGTDIKDNK 285 >gi|319949998|ref|ZP_08023982.1| geranylgeranyl pyrophosphate synthase [Dietzia cinnamea P4] gi|319436340|gb|EFV91476.1| geranylgeranyl pyrophosphate synthase [Dietzia cinnamea P4] Length = 339 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 32/204 (15%) Query: 70 AIEFIHTATLLHDDVVDDSALRRG----------KVAARLVWGNQTSVLVGDFLLSQAFC 119 A+E +H A L+HDD+ D RRG + A R + + L L Sbjct: 68 ALELLHEAFLVHDDLADGDDHRRGQPNLQGRTAARAAERGLPAESAAHLGMVGGLLGGDL 127 Query: 120 MVIETKSQEALEALSLVACTL--------------AEGELRQL-SLSKNLDVTEEDYLHV 164 +++ S+ A L + A TL GE + S++ E L + Sbjct: 128 LLVAAMSEFAR--LPVPAPTLHRVLDEVHRAVVASVAGEYADVHGASEDAPAGCERALAI 185 Query: 165 IKSKTAVLFSAALEV--SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 +KTA +S L + +++AG + L+ G +LG A+Q+VDDVL G+ G Sbjct: 186 GAAKTAA-YSVCLPLVLGAVLAGAPEEIVDPLRETGRHLGTAYQVVDDVLGVFGDPAVTG 244 Query: 223 KNIGEDFRNGKPTLPVILAFQRGT 246 K+ D PT V+LA+ R T Sbjct: 245 KSNSGDLVRRAPT--VLLAYARTT 266 >gi|297790967|ref|XP_002863368.1| farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp. lyrata] gi|297309203|gb|EFH39627.1| farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp. lyrata] Length = 343 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 39/278 (14%) Query: 41 GGKRLRPMLTLATALMLEYRGD---NHVLLACA----IEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + +L+ D V L+CA IE++ L+ DD++D+S RRG Sbjct: 46 GGKLNRGLSVVDSFKLLKEGKDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRG 105 Query: 94 KVA--------------ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-----LS 134 + L+ + +L F + +++ ++ L+ + Sbjct: 106 QPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRGMPYYVDLVDLFNEVELQTACGQMID 165 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQA 193 L+ E +L + SLS + +++ KTA F + + L+AG Sbjct: 166 LITTFEGEKDLSKYSLSI--------HRRIVQYKTAYYSFYLPVACALLMAGENLENHID 217 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 +K+ +++GI FQ+ DD LD + +GK IG D + K + V+ A +R ++ + Sbjct: 218 VKNVLVDMGIYFQVQDDYLDCFADPETLGK-IGTDIEDFKCSWLVVKALERCSEEQTKIL 276 Query: 254 KSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSY 290 N GK N+ K + +E + V EY + SY Sbjct: 277 YE--NYGKADPSNVAKVKDLYKELDLEGVFMEYESKSY 312 >gi|332021468|gb|EGI61836.1| Geranylgeranyl pyrophosphate synthetase [Acromyrmex echinatior] Length = 253 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 7/149 (4%) Query: 97 ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV 156 A V+G +S+ +++L A VI K EA + L G+ + N Sbjct: 24 AHSVYGTASSLSAANYVLFIALERVINLKHPEATQVYMEQLLELHRGQGMDIFWRDNFIC 83 Query: 157 -TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY- 214 TEEDY + KT LF+ A+ + L + + + S LG+ FQ+ DD + Sbjct: 84 PTEEDYKIMTIRKTGGLFNLAVRLMKLFS----TYEEDFSSLIATLGLYFQIRDDYCNLC 139 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 GE E K+ ED GK + P+I A + Sbjct: 140 LGEYTE-NKSYCEDLTEGKFSFPIIHALR 167 >gi|289740703|gb|ADD19099.1| farnesyl pyrophosphate synthase [Glossina morsitans morsitans] Length = 425 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 108/235 (45%), Gaps = 21/235 (8%) Query: 33 VVKYLIFSGGKRLRPMLTLATA--LMLEYRGDNHVL---LACAIEFIHTATLLHDDVVDD 87 V++Y I G K+ R +LT+ T L+ + +N L L +E + +L+DD++D+ Sbjct: 125 VLEYNILHG-KKFRALLTILTYKNLVKDVTAENLKLAQILGWCLELLQCFLVLNDDIMDN 183 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL--------SLVACT 139 S RRG+ + N + D ++ ++ V+ K L+ + T Sbjct: 184 STTRRGQTCWHRL-DNVGLIAFNDSIMVESGIYVLLKKYFSHLDCYVDLMHMFHEMTFIT 242 Query: 140 LAEGELRQLSLSKNLDV-TEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQN--SVRQALK 195 L L+ +K++ T + + +KT+ F + + +AG+++ ++RQ K Sbjct: 243 TCGQSLDMLNSNKSVSTFTMNTHKAIAANKTSHYTFYFPIAAAMHLAGLKDAEALRQT-K 301 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 M +G FQ+ DD LD G+ GK +G D ++ K + ++ QR +K Sbjct: 302 MIAMEIGHFFQVQDDFLDCFGKPEVTGK-LGTDIQDNKCSWLAVVCMQRANDEQK 355 >gi|296198711|ref|XP_002746822.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix jacchus] Length = 372 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 27/203 (13%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQAFCM--VIETK 125 +E + L+ DD++D S+L K ++ W + V + D +L +A C+ +++ Sbjct: 112 VELLQAFFLVTDDIMD-SSLTHWK---QICWYQKPGVGLDAINDAILLEA-CIYTLLKLY 166 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVL 172 Q+ L+L+ L Q + + LD+ TE+ Y ++K K A Sbjct: 167 CQKQPYYLNLIELFLQSS--YQTEIGQTLDLITAPQKNVGLGRFTEKRYKSIVKYKMAFY 224 Query: 173 FSAALEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 F + + +AG + A K + +G FQ+ DD LD G+ + GK +G D ++ Sbjct: 225 FYLPVATAMYMAGTDSEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK-VGTDIQD 283 Query: 232 GKPTLPVILAFQRGTKREKNFWK 254 K + V+ QR T +++ K Sbjct: 284 NKFSWLVVQCLQRSTLKQRQILK 306 >gi|38684029|gb|AAR27053.1| farnesyl diphosphate synthetase [Ginkgo biloba] Length = 390 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 21/207 (10%) Query: 62 DNHVLLAC----AIEFIHTATLLHDDVVDDSALRRGKVA------ARLVWGNQTSVLVGD 111 ++ V L C IE++ L+ DD++D S RRG+ L+ N +L Sbjct: 117 EDEVFLGCVLGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRLPQVGLIAANDGILLRTH 176 Query: 112 FLLSQAFCMVIETKSQ--EALEALSLVACTLAEGELRQLSLSKN--LDVTE---EDYLHV 164 +S+ + +TK + + + V A G++ L + +D+ + YL + Sbjct: 177 --ISRILKLHFQTKPYYVDLCDLFNEVEFQTASGQMLDLITTHEGAIDLAKYKMPTYLRI 234 Query: 165 IKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 ++ KTA F + + L+AG A+K+ + +G FQ+ DD LD G+ +GK Sbjct: 235 VQYKTAYYSFYLPVACALLMAGENLDNFVAVKNILVQMGTYFQVQDDYLDCFGDPEVIGK 294 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREK 250 IG D + K + ++ A +R + ++ Sbjct: 295 -IGTDIEDFKCSWLIVQALERANESQR 320 >gi|322711433|gb|EFZ03006.1| prenyl transferase [Metarhizium anisopliae ARSEF 23] Length = 341 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 23/229 (10%) Query: 27 VEMIPDV-VKYLI-FSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 V+ +P +YL+ G P + + + D + L+ ++ +H +L DD+ Sbjct: 58 VDKLPSCPYEYLLGIYGRHHFAPFVKAFSPTLKNDDPDKYALILDIMDAVHFCLILVDDI 117 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 DDS R+ + A +++G+ + F+L++ + + +E L + L E Sbjct: 118 CDDSTKRKNQTTAHMLYGSCETANRAYFVLTKTINRAMRERPVLGVELLKALEQML---E 174 Query: 145 LRQLSLS------KNLDVTEED----YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 + LSL K EED Y ++ + KT LF L+ + N L Sbjct: 175 GQDLSLVWRRDGLKAFGFAEEDRVPMYRNMAQLKTGTLF-------VLLGRLLNDGGDQL 227 Query: 195 KSYGMNLGIAFQLVDDVLD-YRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + G QL +D + Y E + ED RNG+ + P+++A Sbjct: 228 DNLFTRFGWYAQLQNDCKNIYSDEYAINKGGVAEDLRNGELSFPIVVAL 276 >gi|47097726|ref|ZP_00235227.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes str. 1/2a F6854] gi|47013897|gb|EAL04929.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes str. 1/2a F6854] Length = 116 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC-AIEFIHTATLLHDDVVDDSALRRGK 94 +L+ +GGKR+RPM +A + N V A AIE IH A+++HDDVVDD+ LRRG+ Sbjct: 39 HLLEAGGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGR 98 Query: 95 VAARLVWGNQTSVLVGDF 112 + GN ++ GDF Sbjct: 99 ETIKSKCGNHIAMYTGDF 116 >gi|255716258|ref|XP_002554410.1| KLTH0F04642p [Lachancea thermotolerans] gi|238935793|emb|CAR23973.1| KLTH0F04642p [Lachancea thermotolerans] Length = 351 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 115/249 (46%), Gaps = 22/249 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA-FCMVIETK 125 L IE + L+ DD++D S RRG+ V + F+L A +C++ Sbjct: 84 LGWCIELLQAYFLVADDMMDKSITRRGQPCWYRVEEVGEIAINDAFMLEGAIYCLLKNHF 143 Query: 126 SQEA--LEALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTAVL-FS 174 Q++ +E L L + EL QL + N+D+ + + + +++ KTA F Sbjct: 144 KQDSYYVELLELFHDVTFQTELGQLLDLITAPEDNVDLDKFSLDRHSFIVRFKTAYYSFY 203 Query: 175 AALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + ++ AG+ ++ ++QA + + LG FQ+ DD LD G+ ++GK IG D ++ Sbjct: 204 LPVALAMHAAGISDARDLKQA-QDVLIPLGEYFQIQDDYLDCFGKPEDIGK-IGTDIQDN 261 Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292 K + V A + + ++ N G+ + +K I + R +D Y + Y + Sbjct: 262 KCSWVVNTALKLCSPEQRKVLDE--NYGRKDAQCEQKCRKIFEDLR--IDERY--HEYEE 315 Query: 293 KAKDSLRCL 301 K + LR L Sbjct: 316 KIAEDLRAL 324 >gi|15236002|ref|NP_193452.1| FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase [Arabidopsis thaliana] gi|13431525|sp|Q43315|FPPS2_ARATH RecName: Full=Farnesyl pyrophosphate synthase 2; Short=FPP synthase 2; Short=FPS 2; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2; AltName: Full=Dimethylallyltranstransferase 2; AltName: Full=Farnesyl diphosphate synthase 2; AltName: Full=Geranyltranstransferase 2 gi|1146161|gb|AAB07247.1| farnesyl diphosphate synthase [Arabidopsis thaliana] gi|1146163|gb|AAB07248.1| farnesyl diphosphate synthase [Arabidopsis thaliana] gi|2245078|emb|CAB10500.1| dl4630c [Arabidopsis thaliana] gi|7268470|emb|CAB80990.1| AT4g17190 [Arabidopsis thaliana] gi|18176350|gb|AAL60028.1| putative farnesyl-pyrophosphate synthetase FPS2 [Arabidopsis thaliana] gi|21436457|gb|AAM51429.1| putative farnesyl-pyrophosphate synthetase FPS2 [Arabidopsis thaliana] gi|332658460|gb|AEE83860.1| farnesyl diphosphate synthase 2 [Arabidopsis thaliana] Length = 342 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 34/297 (11%) Query: 41 GGKRLRPMLTLATALMLEYRGD---NHVLLACA----IEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + +L+ D L+CA IE++ L+ DD++D+S RRG Sbjct: 45 GGKLNRGLSVVDSYKLLKQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRG 104 Query: 94 KVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEALEALSLV----------ACT 139 + W + V + D LL +++ +E + LV AC Sbjct: 105 QPC----WFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACG 160 Query: 140 LAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSY 197 + K+L + + + +++ KTA F + + L+AG +K+ Sbjct: 161 QMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHTDVKTV 220 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +++GI FQ+ DD LD + +GK IG D + K + V+ A +R ++ + Sbjct: 221 LVDMGIYFQVQDDYLDCFADPETLGK-IGTDIEDFKCSWLVVKALERCSEEQTKILYE-- 277 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 N GK N+ K + +E +D E Y +++ + L L ++ K++ V+ Sbjct: 278 NYGKAEPSNVAKVKALYKE----LDLEGAFMEYEKESYEKLTKLIEAHQSKAIQAVL 330 >gi|255732615|ref|XP_002551231.1| hypothetical protein CTRG_05529 [Candida tropicalis MYA-3404] gi|240131517|gb|EER31077.1| hypothetical protein CTRG_05529 [Candida tropicalis MYA-3404] Length = 191 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 14/165 (8%) Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG-E 217 EDYL ++K KT LF A+++ SL AGV ++ L + LGI +Q+ DD L+ + Sbjct: 28 EDYLGMVKDKTGSLFRLAIKLLSLHAGVGDN--DELVAIANLLGIIYQVRDDYLNLVDIK 85 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFII---- 273 + M ED GK +LP IL R TK + + S E K+ +I Sbjct: 86 YSAMKGVTCEDLIEGKLSLP-ILHCLRTTKNSP--IHEILYNHHTSSERTKQTVLIDQCL 142 Query: 274 --MREN-RALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 M+ N R+L T ++ K K L P+S +LM+++D Sbjct: 143 KFMKTNSRSLQYTLDLIKNFESKIKTMLEKYPNSE-NSALMKIID 186 >gi|56118821|ref|NP_001008170.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Xenopus (Silurana) tropicalis] gi|51950195|gb|AAH82488.1| MGC88978 protein [Xenopus (Silurana) tropicalis] Length = 389 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 53/258 (20%), Positives = 114/258 (44%), Gaps = 23/258 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + + Sbjct: 138 LAEITELIHTAFLVHRGIVNINELKTCDGPIKDMQFGNKMAILSGDFLLANACIGLADLQ 197 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTE----EDYLHVIKSKTAVLFSAALEVSS 181 + + +E +S + +G + S T+ +++ I L + + + + Sbjct: 198 NAKVVEIVSSAIGDMVKGVYYENSYMPENTFTDVNGISNWMENIFLSHGSLLAKSCQSAM 257 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL---PV 238 L+A + + YG ++ I+++L D+ + I + + +L PV Sbjct: 258 LLAHHDSEISSRAFQYGKHMSISYKLSSDLQPF----------INRKYSDSLFSLNSAPV 307 Query: 239 ILA--FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 +L F + ++ + D I L+KA ++ + + +G KA + Sbjct: 308 VLHQEFIGTEAWMEQIKEAQLKDNLIDRIKLQKA---IKAGKGVTSATDLCCYHGDKALE 364 Query: 297 SLRCLPDSSWKKSLMEVV 314 +L+C P S + +L ++ Sbjct: 365 ALQCFPASEARSALENII 382 >gi|50552378|ref|XP_503599.1| YALI0E05753p [Yarrowia lipolytica] gi|49649468|emb|CAG79180.1| YALI0E05753p [Yarrowia lipolytica] Length = 344 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 32/208 (15%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LL IE + L+ DD++D+S RRG+ L + F+L ++++ Sbjct: 76 LLGWLIELLQAFFLVSDDIMDESKTRRGQPCWYLKPKVGMIAINDAFMLESGIYILLKKH 135 Query: 126 SQEALEALSLVA-----------------CTLAEGE--LRQLSLSKNLDVTEEDYLHVIK 166 ++ + LV T E E L + SL K + +++ Sbjct: 136 FRQEKYYIDLVELFHDISFKTELGQLVDLLTAPEDEVDLNRFSLDK--------HSFIVR 187 Query: 167 SKTAVL-FSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 KTA F + ++ +AG+ N ++QA+ + LG FQ+ DD LD G+ +GK Sbjct: 188 YKTAYYSFYLPVVLAMYVAGITNPKDLQQAMDVL-IPLGEYFQVQDDYLDNFGDPEFIGK 246 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKN 251 IG D ++ K + V A Q+ T ++ Sbjct: 247 -IGTDIQDNKCSWLVNKALQKATPEQRQ 273 >gi|83766667|dbj|BAE56807.1| unnamed protein product [Aspergillus oryzae] Length = 362 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 49/226 (21%), Positives = 92/226 (40%), Gaps = 22/226 (9%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 +D + + Y+ K +R A LE + + I +H ++L+ DD+ Sbjct: 64 TDYKAVKAPYNYINTLPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDI 123 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 D+S RRG A ++G VG + S + V + + L++ + + + + Sbjct: 124 EDNSVPRRGSPTAHTLFG------VGQTINSANYTFVCAFEELQKLQSPNAIGVFIE--Q 175 Query: 145 LRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL- 194 L+ L + LD+ T ++Y+ +I KT F + L+ G + + + Sbjct: 176 LKNLHCGQGLDLYWKYNTHVPTADEYMTMIDHKTGGPFRLCVR---LMQGESSGKTEHID 232 Query: 195 -KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + LG FQ+ DD + K ED GK + P+I Sbjct: 233 ARRFVTLLGRYFQIRDDYQNLTSAEYTSQKGFWEDLDEGKSSWPLI 278 >gi|126136094|ref|XP_001384571.1| arnesyl diphosphate synthetase (FPP synthetase) [Scheffersomyces stipitis CBS 6054] gi|126091769|gb|ABN66542.1| arnesyl diphosphate synthetase (FPP synthetase) [Scheffersomyces stipitis CBS 6054] Length = 350 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 14/198 (7%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LL AIE + L+ DD++D S RRG+ L G + F+L A ++++ Sbjct: 82 LLGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLAEGVGNIAINDSFMLEGAIYVLLKKH 141 Query: 126 SQE---ALEALSLVACTLAEGELRQL--SLSKNLDVTEEDYLHVIKSKTAVLFSAA---- 176 + ++ L L + EL QL ++ + V + D + K V+F A Sbjct: 142 FRNDSYYVDLLDLFHEVTFKTELGQLLDLVTADEYVVDLDKFSLDKHSFIVIFKTAYYSF 201 Query: 177 ---LEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + ++ ++G+ ++ + ++ + LG FQ+ DD LD G ++GK IG D ++ Sbjct: 202 YLPVALAMYMSGINSAEDLKQVQDILIPLGEYFQIQDDFLDCFGTPEQIGK-IGTDIKDN 260 Query: 233 KPTLPVILAFQRGTKREK 250 K + + A R K ++ Sbjct: 261 KCSWVINQALSRVNKEQR 278 >gi|115461044|ref|NP_001054122.1| Os04g0657300 [Oryza sativa Japonica Group] gi|39545740|emb|CAE75966.1| OSJNBa0071I13.18 [Oryza sativa Japonica Group] gi|113565693|dbj|BAF16036.1| Os04g0657300 [Oryza sativa Japonica Group] gi|125550054|gb|EAY95876.1| hypothetical protein OsI_17742 [Oryza sativa Indica Group] Length = 407 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 26/239 (10%) Query: 42 GKRLRPMLTLATALMLEYRG----DNHVLLAC----AIEFIHTATLLHDDVVDDSALRRG 93 G +L L++ + ML +G D LAC +E++ + L+ DD+ D++ RR Sbjct: 110 GGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLDDITDNAYTRRD 169 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL------VACTLAEGELRQ 147 + + S + LL +I+ +E L L + A G++ Sbjct: 170 NLCWYKLPTVGMSAINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNEIGLQTAMGQMLD 229 Query: 148 L----SLSKNLDVTE-EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNL 201 L + +K+L + Y ++K KT+ F + + L+ G + S LK+ + + Sbjct: 230 LITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGARLSDYVELKNVLIEM 289 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE-----KNFWKS 255 G+ FQ+ DD LD G+ +GK +G D + K + ++ A + + E +N+ KS Sbjct: 290 GVYFQIQDDYLDCFGDPEVIGK-VGTDIEDYKCSWLIVQAMELANENEMKILYENYGKS 347 >gi|332020707|gb|EGI61112.1| Farnesyl pyrophosphate synthetase [Acromyrmex echinatior] Length = 354 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 20/223 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET- 124 +LA +E + + DD+ D S RRG++ + + F+L + +I+ Sbjct: 87 ILAWCVELMQAYFSIMDDIEDQSLFRRGQLCWYRYDDLGLAAINDSFMLQGSIFYLIQKH 146 Query: 125 -KSQEA-LEALSLVACTLAEGELRQ----LSLS----KNLDV-TEEDYLHVIKSKTAVLF 173 K ++ ++ L + T+ + + Q LS + NLD+ T Y +I+ KTA + Sbjct: 147 FKGKDCYVKLLEIFQDTIMKAAMGQSLDLLSTNFGNRPNLDLFTMNQYNSIIEFKTAY-Y 205 Query: 174 SAALE--VSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 S L V+ +AG+ Q R+A + +G FQ+ DD LD G+ GK+ D Sbjct: 206 STCLPVIVAMHLAGIKDQEMFREA-TTILTEIGCLFQIQDDYLDCYGDFEICGKD-NTDI 263 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTI-NDGKISVENLKKAF 271 + GK T ++ A QR T +++ + + N + V+ +K+ F Sbjct: 264 QEGKCTWFIVEALQRVTSQQRKILEESYGNLDREKVQRVKQLF 306 >gi|326480620|gb|EGE04630.1| farnesyl pyrophosphate synthetase [Trichophyton equinum CBS 127.97] Length = 347 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 22/231 (9%) Query: 40 SGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R + TAL L E + + LL E + L+ DD++D S RRG Sbjct: 47 PGGKLNRGLSVPDTALALLEKPLTEEQFKHLGLLGWMTELLQAFFLVSDDIMDSSITRRG 106 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC---TLAEGELRQL-- 148 + G + F+L + ++++ + ++LV T + EL QL Sbjct: 107 EPCWYRRPGVGMIAINDAFMLESSIYVLLKKHFRSHPAYINLVELFHETTFQTELGQLCD 166 Query: 149 ---SLSKNLDVTE---EDYLHVIKSKTA---VLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + N+D+ + + ++ KTA AL + L ++RQA + Sbjct: 167 LITAPEDNVDLNNFNMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPKNLRQA-HDILI 225 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LG FQ DD LD G+ ++GK IG D ++ K + V A +R T ++ Sbjct: 226 PLGQYFQAQDDYLDVFGKPEQIGK-IGTDIQDNKCSWVVNQALKRCTPAQR 275 >gi|296198925|ref|XP_002747055.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 1 [Callithrix jacchus] Length = 400 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 35/272 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHTALLVHRGIVNINELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKT--------AVLFSAA 176 + + +E L+ L +G + S S D +T++ + K +T A AA Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSAKEDYITDDIGISTWKEQTFLSHGALLAKSCQAA 267 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV--NEMGKNIGEDFRNGKP 234 +E++ A VQN Q YG ++ ++ ++ D+ + E + M N+ Sbjct: 268 MELAKHDAEVQNMAFQ----YGKHMAMSHKINSDLQPFTKEKTNDSMTFNLN-------- 315 Query: 235 TLPVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSY 290 + PV+L Q R+ W I + G++ L++ + + +D + Sbjct: 316 SAPVVL-HQEFLGRD--LWIKQIREAQEKGRLDYGKLRERIKAGKGVTSAIDL---CRYH 369 Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 G KA ++L P S + +L +V F + R + Sbjct: 370 GNKALEALESFPPSEARSALENIV-FAVTRFS 400 >gi|224089549|ref|XP_002308751.1| predicted protein [Populus trichocarpa] gi|222854727|gb|EEE92274.1| predicted protein [Populus trichocarpa] Length = 342 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 36/247 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQTSVLVGDFL 113 L IE++ L+ DD++D S RRG+ +AA ++ N ++ + Sbjct: 78 LGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGLIAANDGILLRNHIPRILKNHF 137 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 +A+ + + E + Q A + + L+ E +L + +LS LH ++ Sbjct: 138 RDKAYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLS----------LHRRIV 187 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + L+AG +K+ + +G FQ+ DD LD G +GK Sbjct: 188 QYKTAYYSFYLPVACALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFGAPETIGK- 246 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDT 283 IG D + K + V+ A + + +K N GK EN+ K + E N V Sbjct: 247 IGTDIEDFKCSWLVVKALEICNEEQKKLLHE--NYGKADPENVAKVKALYHELNLQGVFA 304 Query: 284 EYRAYSY 290 +Y + SY Sbjct: 305 DYESKSY 311 >gi|254389401|ref|ZP_05004629.1| hypothetical protein SSCG_01956 [Streptomyces clavuligerus ATCC 27064] gi|197703116|gb|EDY48928.1| hypothetical protein SSCG_01956 [Streptomyces clavuligerus ATCC 27064] Length = 167 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 29/136 (21%) Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE--MGKNIGEDFRNGKPTL 236 +++L+ ++ AL +GM LG A+Q+ DD D G ++ K + ED R K TL Sbjct: 1 MAALVTCAPPALVGALTDFGMALGTAYQITDDTADLEGVTHDGRPTKTVAEDLRGAKVTL 60 Query: 237 PVILAFQR---------------GTKREKNFWKSTINDGKI-----SVENLKKAF----- 271 P+ A R G + + DG+ +VE L++A Sbjct: 61 PLAHATARVPADRLMALWGRVRDGARADDGRAAGNGGDGRAATDGRAVEELRRALLSCGA 120 Query: 272 --IIMRENRALVDTEY 285 + E R LVD + Sbjct: 121 AAVCEEEARLLVDGAW 136 >gi|330791598|ref|XP_003283879.1| farnesyl diphosphate synthase [Dictyostelium purpureum] gi|325086150|gb|EGC39544.1| farnesyl diphosphate synthase [Dictyostelium purpureum] Length = 384 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 39/197 (19%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL------VGDFLLSQAF- 118 +L +E++ + L+ DD++D S RRG+ W Q + + +G ++ +F Sbjct: 112 VLGWCVEWLQSFFLVADDLMDSSITRRGQPC----WYRQPNPISNNGTPIGTIAVNDSFI 167 Query: 119 ---CMVIETK-----SQEALEALSLVACTLAEGELRQLSLSKNLDVTEED---------- 160 C+ I K Q + L L T + EL QL LD+T + Sbjct: 168 LESCIYILIKKYFRNEQYYADILDLFHETSYQTELGQL-----LDLTTQPNRGDFSLFTL 222 Query: 161 --YLHVIKSKTAVL-FSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRG 216 Y ++K KTA F + ++ L+ G+ ++ + K + +G FQ+ DD LD G Sbjct: 223 NTYRRIVKYKTAYYSFYLPVALAMLMCGINSTPAFETAKDILLPMGEYFQIQDDYLDCYG 282 Query: 217 EVNEMGKNIGEDFRNGK 233 +GK IG D K Sbjct: 283 SPAVIGK-IGRDIEENK 298 >gi|268569452|ref|XP_002640526.1| Hypothetical protein CBG18688 [Caenorhabditis briggsae] gi|187024775|emb|CAP36098.1| CBR-FDPS-1 protein [Caenorhabditis briggsae AF16] Length = 351 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 55/299 (18%) Query: 41 GGKRLRPMLTLAT--ALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R L + T AL R + L A +E I + L+ DD++D+S RRG Sbjct: 51 GGKYSRASLCVDTIRALQPHLREETQELQAVCEAAATLEIIQSFYLIADDIMDNSETRRG 110 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCM--VIETKSQEALEA-LSLVACTLAEGELRQLSL 150 K W + VG ++ AF M +E + AL ++L A + +Q +L Sbjct: 111 KPC----WFRREG--VGMSAINDAFIMDSFVEDILRLALPGHINLDRLCEAYRKSKQKTL 164 Query: 151 -SKNLDV---------TEEDYLHVIKSKTA--VLFSA---ALEVSSLIAGVQNSVRQALK 195 + LD T + Y ++++KT+ +F AL +S ++A SV++A Sbjct: 165 IGQFLDTSSVNQIASFTWDRYELMVENKTSHYTVFHPLQMALIISDVLA-YHGSVKKA-- 221 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK----- 250 +G FQ DD LD G+ GK IG D ++GK T + A Q+ K Sbjct: 222 --AYQIGFLFQSQDDFLDVYGDPKVTGK-IGTDIQDGKCTWLAVRALQKMHSSPKISTQL 278 Query: 251 --NFWKSTINDGKISVENLKKAF--IIMRENRALVDTEYRAYS--YGQKAKDSLRCLPD 303 +F +S + VE ++K + + +RE E+R + + + K S+ +PD Sbjct: 279 IADFKQSFGSSDPEKVEKIRKIYDELQLRE-------EFRRFEQHFAGEIKKSIAEIPD 330 >gi|241994864|gb|ACS74708.1| farnesyl pyrophosphate synthase [Michelia chapensis] Length = 351 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 68/294 (23%), Positives = 125/294 (42%), Gaps = 26/294 (8%) Query: 40 SGGKRLRPMLTLATALML---EYRGDNHVLLACA----IEFIHTATLLHDDVVDDSALRR 92 GGK R + + + +L + ++ + L+C+ IE++ L+ DD++D S RR Sbjct: 53 PGGKLNRGLSVIDSYQLLKDGQELSEDEIFLSCSLGWCIEWLQAYFLVLDDIMDGSHTRR 112 Query: 93 GKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA------LEALSLVACTLAEGELR 146 G+ V + LL +I +E L+ + V A G++ Sbjct: 113 GQPCWFRVPKVDMIAINDGILLRNHIPRIIRKNFREKSYYVDLLDLFNEVEFQTASGQML 172 Query: 147 QLSLS----KNLD-VTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMN 200 L + K+L T Y +++ KTA F + + L++G +K+ + Sbjct: 173 DLITTHEGEKDLSKYTMPVYCRIVQYKTAYYSFYLPVACALLMSGENLDNFTDVKNILIE 232 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDG 260 +G FQ+ DD LD G+ +GK IG D + K + V+ A + + +K N G Sbjct: 233 MGTYFQVQDDYLDCYGDPKVIGK-IGTDIEDFKCSWLVVQALEHADENQKKILSE--NYG 289 Query: 261 KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 K ++ K + ++ +D E Y K+ + L ++ KS+ EV+ Sbjct: 290 KPDAAHVAKVKQLYKD----LDLENVYLEYESKSYEKLIASIEAQPSKSVQEVL 339 >gi|224048353|ref|XP_002193223.1| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Taeniopygia guttata] Length = 449 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 24/259 (9%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ L+ + + +GN+ +VL GDFLL+ A + + + Sbjct: 124 LAEITELIHTAFLVHRGIVNIGELKSCDGPLKDMQFGNKMAVLSGDFLLANACTSLAQLQ 183 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-----HVIKSKTAVLF---SAAL 177 + + +E +S L +G + S S +T++ + V S +A+L AA+ Sbjct: 184 NTKVVELISSAIGDLVQGIYYENSKSSENCLTDDIGISRWKEQVFLSHSALLAKSCQAAM 243 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 E++ A +Q+ Q YG ++ ++ +L D+ + V E + N P Sbjct: 244 ELAKHSAEIQDMAFQ----YGKHMSMSHKLHSDLQPF---VKETSSDTMAFSLNSAP--- 293 Query: 238 VILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 A R + W I + GK ++ + KK ++ + + +G +A Sbjct: 294 ---AILHQEFRGREAWLKQIREAQGKGNIVDYKKLQEAIKAGKGVTSAIDLCRCHGNRAL 350 Query: 296 DSLRCLPDSSWKKSLMEVV 314 +L P S + +L +V Sbjct: 351 AALERFPPSEARDALANIV 369 >gi|223947205|gb|ACN27686.1| unknown [Zea mays] Length = 316 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 33/214 (15%) Query: 61 GDNHVLLAC----AIEFIHTATLLHDDVVDDSALRRGKVA------ARLVWGNQTSVLVG 110 G+ LAC IE++ L+ DD++DDS RRG+ L+ N +L Sbjct: 42 GEEETFLACTLGWCIEWLQAFFLVLDDIMDDSHTRRGQPCWFRVPQVGLIAANDGIILRN 101 Query: 111 DFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQL--SLSKNLDVTEED---YLH 163 +S+ + K A L+ + V A G+L L + D+T+ + + Sbjct: 102 H--ISRILRRHFKGKPYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNITVHGR 159 Query: 164 VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYG------MNLGIAFQLVDDVLDYRG 216 +++ KTA F + + L++G + L +YG + +G FQ+ DD LD G Sbjct: 160 IVQYKTAYYSFYLPVACALLLSG------ENLDNYGDVENILVEMGTYFQVQDDYLDCYG 213 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +GK IG D + K + V+ A +R + +K Sbjct: 214 DPEFIGK-IGTDIEDYKCSWLVVQALERADESQK 246 >gi|222629694|gb|EEE61826.1| hypothetical protein OsJ_16466 [Oryza sativa Japonica Group] Length = 403 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 26/239 (10%) Query: 42 GKRLRPMLTLATALMLEYRG----DNHVLLAC----AIEFIHTATLLHDDVVDDSALRRG 93 G +L L++ + ML +G D LAC +E++ + L+ DD+ D++ RR Sbjct: 106 GGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLDDITDNAYTRRD 165 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL------VACTLAEGELRQ 147 + + S + LL +I+ +E L L + A G++ Sbjct: 166 NLCWYKLPTVGMSAINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNEIGLQTAMGQMLD 225 Query: 148 L----SLSKNLDVTE-EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNL 201 L + +K+L + Y ++K KT+ F + + L+ G + S LK+ + + Sbjct: 226 LITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGARLSDYVELKNVLIEM 285 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE-----KNFWKS 255 G+ FQ+ DD LD G+ +GK +G D + K + ++ A + + E +N+ KS Sbjct: 286 GVYFQIQDDYLDCFGDPEVIGK-VGTDIEDYKCSWLIVQAMELANENEMKILYENYGKS 343 >gi|255642257|gb|ACU21393.1| unknown [Glycine max] Length = 342 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 36/249 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR---LVWGNQTSVLVGDF 112 L IE++ L+ DD++D+S RRG+ +AA L+ + +L F Sbjct: 78 LGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILKKHF 137 Query: 113 LLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 + +++ ++ + S L+ E +L + +L+ LH ++ Sbjct: 138 RGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLT----------LHRRIV 187 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + L+AG +K+ + +G FQ+ DD LD G+ +GK Sbjct: 188 QYKTAYYSFYLPVACALLMAGEDLDNHVDVKNILVEMGTYFQVQDDYLDRFGDPQTIGK- 246 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDT 283 IG D + K + V+ A + +++K N GK EN+ K + E N V Sbjct: 247 IGTDIEDFKCSWLVVKALELSNEQQKKVLHE--NYGKADPENVAKVKALYNELNLQAVFE 304 Query: 284 EYRAYSYGQ 292 EY SY + Sbjct: 305 EYENGSYAK 313 >gi|71005854|ref|XP_757593.1| hypothetical protein UM01446.1 [Ustilago maydis 521] gi|46097004|gb|EAK82237.1| hypothetical protein UM01446.1 [Ustilago maydis 521] Length = 399 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 32/225 (14%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA-------- 117 +L IE + L+ DD++D S RRG+ V G + F+L A Sbjct: 176 ILGWCIELLQAYFLVADDMMDASVTRRGQPCWYRVEGVGNIAINDAFMLEAAIYFLLKKH 235 Query: 118 ------FCMVIE-----TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166 + M++E T E + + L+ +L + SL K+ +L V+ Sbjct: 236 FRSDPYYGMLLELFHDVTFQTELGQLIDLITAPEDSVDLSKFSLQKH-------HLIVVY 288 Query: 167 SKTAVLFSAALEVSSLIAGVQNSV--RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 F + ++ +AGV + +QAL + +G FQ+ DD LD G ++GK Sbjct: 289 KTAFYSFYLPVALAMRMAGVTDETLYKQALDIL-LPMGEYFQVQDDFLDCYGTPEQIGK- 346 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 IG D + K + + +A Q T ++ N GK E K+ Sbjct: 347 IGTDIFDNKCSWNINIALQNATPEQRQILDQ--NYGKKDAECEKR 389 >gi|162462162|ref|NP_001105039.1| farnesyl pyrophosphate synthase [Zea mays] gi|1346033|sp|P49353|FPPS_MAIZE RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|33340602|gb|AAQ14871.1|AF330036_1 farnesyl diphosphate synthase [Zea mays] gi|662368|gb|AAB39276.1| farnesyl pyrophosphate synthetase [Zea mays] gi|194702348|gb|ACF85258.1| unknown [Zea mays] gi|194708184|gb|ACF88176.1| unknown [Zea mays] gi|195623932|gb|ACG33796.1| farnesyl pyrophosphate synthetase [Zea mays] Length = 350 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 33/214 (15%) Query: 61 GDNHVLLACA----IEFIHTATLLHDDVVDDSALRRGKVA------ARLVWGNQTSVLVG 110 G+ LAC IE++ L+ DD++DDS RRG+ L+ N +L Sbjct: 76 GEEETFLACTLGWCIEWLQAFFLVLDDIMDDSHTRRGQPCWFRVPQVGLIAANDGIILRN 135 Query: 111 DFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQL--SLSKNLDVTEED---YLH 163 +S+ + K A L+ + V A G+L L + D+T+ + + Sbjct: 136 H--ISRILRRHFKGKPYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNITVHGR 193 Query: 164 VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYG------MNLGIAFQLVDDVLDYRG 216 +++ KTA F + + L++G + L +YG + +G FQ+ DD LD G Sbjct: 194 IVQYKTAYYSFYLPVACALLLSG------ENLDNYGDVENILVEMGTYFQVQDDYLDCYG 247 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +GK IG D + K + V+ A +R + +K Sbjct: 248 DPEFIGK-IGTDIEDYKCSWLVVQALERADESQK 280 >gi|324515875|gb|ADY46342.1| Farnesyl pyrophosphate synthase [Ascaris suum] Length = 338 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 30/224 (13%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKV 95 GGK +R L +A L+ + + +E + L+ DDV+D S RRGK Sbjct: 47 GGKCVRGRLLVAAYNALDRHATRERIQQVATVGACLEILQAFFLIFDDVMDRSTTRRGKP 106 Query: 96 AARLVWGNQTSV--------LVGDFLLSQAFCMVIET-KSQEALEALSLVACTLAE-GEL 145 W V L+ D ++++ V+E +++ + ++ L A + G++ Sbjct: 107 C----WHTLPDVGLNAINDGLLLDSVINEVLNDVLENDPNKDTVSSIFLRAKQMTVIGQM 162 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFS-AALEVSSLIAG----VQNSVRQALKSYGMN 200 S S D T E Y ++ KT+ A L V+ L+A + R A K Sbjct: 163 LDNSTSGLKDCTWERYGDIVTHKTSYYTCFAPLRVAMLLADRFMYADETERIAFK----- 217 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG FQ DD LD G+ GK +G D R GK T A +R Sbjct: 218 LGYLFQAQDDYLDCFGDPLVTGK-VGSDLREGKCTWVTCKAAER 260 >gi|42558474|gb|AAS19931.1| farnesyl diphosphate synthase [Taxus x media] Length = 351 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 21/206 (10%) Query: 62 DNHVLLAC----AIEFIHTATLLHDDVVDDSALRRGKVA------ARLVWGNQTSVLVGD 111 + V L C IE++ L+ DD++D S RRG+ LV N +L Sbjct: 78 EGEVFLGCVLGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRLPKVGLVAANDGILLRNH 137 Query: 112 FLLSQAFCMVIETKS--QEALEALSLVACTLAEGELRQLSLSKN--LDVTE---EDYLHV 164 +++ M TK + L+ + V A G+L L + +D+++ YL + Sbjct: 138 --ITRILKMHFRTKPYYSDPLDLFNEVEFQTACGQLLDLITTHEGAMDLSKYKMPTYLRI 195 Query: 165 IKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 ++ KTA F + + L+AG +K+ + +G FQ+ DD LD G+ +GK Sbjct: 196 VQYKTAYYSFYLPVACALLMAGENLDNFVDVKNILIQMGTYFQVQDDYLDCFGDPQVIGK 255 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKRE 249 IG D + K + V+ A ++ + + Sbjct: 256 -IGTDIEDFKCSWLVVQALEQANESQ 280 >gi|255024193|ref|ZP_05296179.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-208] Length = 151 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 4/77 (5%) Query: 169 TAVLFSAALEVSSLIAGVQNSVRQALKSY--GMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 T LF AL S G + + K Y G LG+AFQ++DDVLDY +GK + Sbjct: 1 TXQLF--ALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEGLGKPVL 58 Query: 227 EDFRNGKPTLPVILAFQ 243 D + G +LP+I A + Sbjct: 59 NDMKQGIYSLPLIYAMK 75 >gi|310792468|gb|EFQ27995.1| polyprenyl synthetase [Glomerella graminicola M1.001] Length = 377 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 64/242 (26%), Positives = 94/242 (38%), Gaps = 30/242 (12%) Query: 24 CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 C+ +PD V YL+ GK L A L E + L+ DD Sbjct: 81 CNRGMSVPDSVSYLL---GKPLNEEEYFQAAT-----------LGWMTELLQAFFLVSDD 126 Query: 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA------LEALSLVA 137 ++D S RRGK G + F+L A ++ +E LE V Sbjct: 127 IMDTSITRRGKPCWYRHEGVGMVAINDAFMLEAAIYTLLRKFFREHASYVDLLELFHEVT 186 Query: 138 CTLAEGELRQLSLSK----NLD-VTEEDYLHVIKSKTA---VLFSAALEVSSLIAGVQNS 189 G+L L + NLD + E Y ++ KTA AL + L + Sbjct: 187 FQTELGQLCDLLTAPEDKVNLDNFSMEKYSFIVIYKTAYYSFYLPVALALHCLNIATPKN 246 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++QA + + LG FQ+ DD LD G+ +GK IG D + K + V A Q T + Sbjct: 247 LKQA-EDILIPLGEYFQIQDDYLDNFGQPEHIGK-IGTDIMDNKCSWLVNQALQIATPEQ 304 Query: 250 KN 251 + Sbjct: 305 RQ 306 >gi|19112126|ref|NP_595334.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces pombe 972h-] gi|74626740|sp|O59703|GGPPS_SCHPO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase; AltName: Full=Sporulation-specific protein 9 gi|3135993|emb|CAA19054.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces pombe] Length = 351 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 71/288 (24%), Positives = 117/288 (40%), Gaps = 59/288 (20%) Query: 20 LKRICSDVEMIPDVVKYLIFS------GGKRLRPMLTLATALML--------EYRGDNHV 65 ++ I ++ P+ + L++S GGK R + L + L E+R + Sbjct: 26 IREILESMQYFPEETEKLLYSIKRNTLGGKNNRGLAVLQSLTSLINRELEEAEFR--DAA 83 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG-----NQTSVLVG--DFLLSQAF 118 LL IE + L+ DD++D S RRG LV G N++ +L L+ + F Sbjct: 84 LLGWLIEILQGCFLMADDIMDQSIKRRGLDCWYLVVGVRRAINESQLLEACIPLLIRKYF 143 Query: 119 ----------------CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL 162 + E QE L++ E LR L K Y Sbjct: 144 RNMPYYVDLLDTFREVTFLTELGQQE-----DLLSSRDGEASLRSFDLMK--------YD 190 Query: 163 HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS---YGMNLGIAFQLVDDVLDYRGEVN 219 +I KT+ +S L + + +NS ++A + LG FQ+ DD LD G+ Sbjct: 191 FIITYKTS-FYSFYLPIKCALLLSRNSNQKAYDTTIKLSKLLGYYFQVQDDYLDCFGDYT 249 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENL 267 +GK +G D ++ K T V A + + + N ++ + GK EN+ Sbjct: 250 VLGK-VGMDIQDNKCTWLVCYAEKFASADQLNLLRA--HYGKAGSENI 294 >gi|328793317|ref|XP_001122685.2| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera] Length = 262 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%) Query: 161 YLHVIKSKTAVL-FSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 Y H+IK KT+ F ++ AG+ + + + + + FQ+ +D LDY + Sbjct: 99 YNHLIKHKTSYFSFILPFSLAMRFAGIIDLEMHREAEKILTKISHLFQVQNDFLDYYSK- 157 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 E+G G D + GK T P+++A +R T +K K Sbjct: 158 EEIGGKSGTDIQEGKCTWPIVIALERATAEQKRILK 193 >gi|329767035|ref|ZP_08258563.1| hypothetical protein HMPREF0428_00260 [Gemella haemolysans M341] gi|328837760|gb|EGF87385.1| hypothetical protein HMPREF0428_00260 [Gemella haemolysans M341] Length = 113 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 KT L ++ + L+A +N + +K +G LGIA+Q+ DD+LDY G+ ++GK Sbjct: 5 KTGRLIELPMDFACLVAD-KNCDYEDVKEFGKQLGIAYQIKDDILDYYGDFEKIGK 59 >gi|33340604|gb|AAQ14872.1|AF330037_1 truncated farnesyl diphosphate synthase [Zea mays] Length = 341 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 33/214 (15%) Query: 61 GDNHVLLACA----IEFIHTATLLHDDVVDDSALRRGKVA------ARLVWGNQTSVLVG 110 G+ LAC IE++ L+ DD++DDS RRG+ L+ N +L Sbjct: 67 GEEETFLACTLGWCIEWLQAFFLVLDDIMDDSHTRRGQPCWFRVPQVGLIAANDGIILRN 126 Query: 111 DFLLSQAFCMVIETKSQEA--LEALSLVACTLAEGELRQL--SLSKNLDVTEED---YLH 163 +S+ + K A L+ + V A G+L L + D+T+ + + Sbjct: 127 H--ISRILRRHFKGKPYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNITVHGR 184 Query: 164 VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYG------MNLGIAFQLVDDVLDYRG 216 +++ KTA F + + L++G + L +YG + +G FQ+ DD LD G Sbjct: 185 IVQYKTAYYSFYLPVACALLLSG------ENLDNYGDVENILVEMGTYFQVQDDYLDCYG 238 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +GK IG D + K + V+ A +R + +K Sbjct: 239 DPEFIGK-IGTDIEDYKCSWLVVQALERADESQK 271 >gi|297800392|ref|XP_002868080.1| hypothetical protein ARALYDRAFT_493157 [Arabidopsis lyrata subsp. lyrata] gi|297313916|gb|EFH44339.1| hypothetical protein ARALYDRAFT_493157 [Arabidopsis lyrata subsp. lyrata] Length = 342 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 34/297 (11%) Query: 41 GGKRLRPMLTLATALMLEYRGD---NHVLLACA----IEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + +L+ D L+CA IE++ L+ DD++D+S RRG Sbjct: 45 GGKLNRGLSVVDSYKLLKQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRG 104 Query: 94 KVAARLVWGNQTSV---LVGD-FLLSQAFCMVIETKSQEALEALSLV----------ACT 139 + W + V + D LL +++ +E + LV AC Sbjct: 105 QPC----WFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACG 160 Query: 140 LAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSY 197 + K+L + + + +++ KTA F + + L+AG +K+ Sbjct: 161 QMIDLITTFDGEKDLSKYSLQIHRRIVQYKTAYYSFYLPVACALLMAGENLENHTDVKNV 220 Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTI 257 +++GI FQ+ DD LD + +GK IG D + K + V+ A +R + + Sbjct: 221 LVDMGIYFQVQDDYLDCFADPETLGK-IGTDIEDFKCSWLVVKALERCNEEQTKILYE-- 277 Query: 258 NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 N GK N+ K + +E +D E Y +++ + L L ++ K++ V+ Sbjct: 278 NYGKAEPSNVAKVKALYKE----LDLEGAFMEYEKESYEKLTKLIEAHQSKAIQAVL 330 >gi|227538591|ref|ZP_03968640.1| possible trans-hexaprenyltranstransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227241510|gb|EEI91525.1| possible trans-hexaprenyltranstransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 127 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 10/131 (7%) Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK--- 250 + ++G +GIAFQ+ + ++++GK +G D + K TLP+I A + K EK Sbjct: 1 MHAFGEKVGIAFQI--KDDLFDFGLDDVGKPLGNDIKEKKMTLPLIYALSQTDKSEKRRI 58 Query: 251 -NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 N K+ D K E + AF+ R + L + + Y Q+A + L P+ ++ Sbjct: 59 INLVKNHNEDNKKVAEVI--AFV--RSSGGLDYATEKMFQYQQEAFEILNSFPEGIYRTG 114 Query: 310 LMEVVDFCLQR 320 L ++V + +R Sbjct: 115 LEQLVRYTTER 125 >gi|313619071|gb|EFR90878.1| geranyltranstransferase [Listeria innocua FSL S4-378] Length = 94 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L+ + N+GI FQ+ DD+LD G+ +MGK G D K T P +L + G KR N Sbjct: 6 LRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLE-GAKRALN 62 >gi|218437764|ref|YP_002376093.1| polyprenyl synthetase [Cyanothece sp. PCC 7424] gi|218170492|gb|ACK69225.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424] Length = 341 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 17/175 (9%) Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 TL G+ R + + + T ED I+ KT ++ A + ++I Q K YG Sbjct: 136 TLLAGQERDI---QGMSRTWEDCWQTIEMKTGYSYAMATALGAMIGTNHQEWIQICKIYG 192 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ-RGTKREKNFWKSTI 257 +LG+A Q+ +D+ G +GK+ D GK TLP++ + RE+ S I Sbjct: 193 YHLGLAIQIFNDL---EGIWQPVGKS---DLHRGKITLPLLYGLECSHPDREELL--SII 244 Query: 258 NDGKISV--ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 D +I V + +K+ + L+ + A + A ++ PD KK+L Sbjct: 245 EDHQIIVKSQRIKEILDKIEAKNYLI---WMALQHRDCALQIIKVFPDEEGKKAL 296 >gi|290965822|gb|ADD70311.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Zonotrichia albicollis] Length = 376 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 24/259 (9%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ L+ + + +GN+ +VL GDFLL+ A + + + Sbjct: 124 LAEITELIHTAFLVHRGIVNIGELKSCDGPLKDMQFGNKMAVLSGDFLLANACTSLAQLQ 183 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS--------AAL 177 + + +E +S L +G + S S +T++ + K + + S AA+ Sbjct: 184 NTKVVELISSAIGDLVQGIYYENSKSSENCLTDDIGISRWKEQVFLRHSALLAKSCQAAM 243 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 E++ A +Q+ Q YG ++ ++ +L D+ + V E + N P Sbjct: 244 ELAKHSAEIQDMAFQ----YGKHMSMSHKLHSDLQPF---VKETSSDTMAFSLNSAP--- 293 Query: 238 VILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 A R + W I + GK ++ + KK ++ + + +G +A Sbjct: 294 ---AILHQEFRGREAWLKQIREAQGKGNIVDYKKLQEAIKAGKGVTSAIDLCRCHGNRAL 350 Query: 296 DSLRCLPDSSWKKSLMEVV 314 +L P S + +L +V Sbjct: 351 AALERFPPSEARDALANIV 369 >gi|149636134|ref|XP_001511694.1| PREDICTED: similar to subunit 2 of solanesyl diphosphate synthase [Ornithorhynchus anatinus] Length = 390 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 30/262 (11%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ L+ + + +GN+ ++L GDFLL+ A + + + Sbjct: 138 LAEITELIHTAFLVHRGIVNLGELKTSDGPLKDMQFGNKIAILSGDFLLANACTSLAQLQ 197 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFS--------AA 176 + + +E +S L +G + S S + +T++ + K +T + S AA Sbjct: 198 NTKVVELISSALSDLVQGIYHENSSSAEENWITDDIGISAWKKQTFLSHSALLAKSCQAA 257 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +E++ A VQ Q YG ++ ++ ++ D+ + GK+ G + Sbjct: 258 MELARHGATVQEVAFQ----YGKHMSLSHKINSDLQPFV-----KGKSDG-SLAFSLNSA 307 Query: 237 PVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292 P IL Q RE W I + G + L++A ++ + + +G Sbjct: 308 PAIL-HQEFLGRE--MWMKQIREAQVKGSLDYSKLREA---IKAGKGVTSAIDLCRYHGN 361 Query: 293 KAKDSLRCLPDSSWKKSLMEVV 314 KA ++L P S + +L +V Sbjct: 362 KALEALEHFPPSEARSALANIV 383 >gi|13641224|gb|AAK31630.1| geranyl-geranyl diphosphate synthase-like [Leptomonas sp. F6] Length = 173 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 3/85 (3%) Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 D +H K+ A A+ + ++ V A++S+G LG+AFQ+VD L+ G Sbjct: 71 DAIHTYKTGGAAGTLCAM--ACVLCDAPPDVSVAMESFGRALGLAFQIVDAALNVSGFEG 128 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQR 244 ++ K ED + GK T PV +A R Sbjct: 129 DL-KEEAEDIKGGKVTYPVAVAMGR 152 >gi|72391330|ref|XP_845959.1| farnesyl pyrophosphate synthase [Trypanosoma brucei TREU927] gi|62175946|gb|AAX70070.1| farnesyl pyrophosphate synthase [Trypanosoma brucei] gi|70802495|gb|AAZ12400.1| farnesyl pyrophosphate synthase [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 367 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 32/191 (16%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---- 126 IEF+ L+ DD++D+S RRGK G + D LL +++ ++ Sbjct: 92 IEFLQAHYLVEDDIMDNSVTRRGKPCWYRHPGVTVQCAINDGLLLKSWTHMMAMHFFADR 151 Query: 127 ---QEALEALSLVACTLAEGEL----------------RQLSLSKNLDVTEEDYLHVIKS 167 Q+ L + V T A G+L Q + + + T +Y ++K Sbjct: 152 PFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKY 211 Query: 168 KTAVL-----FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 KTA L VS + V V + L M +G FQ+ DDV+D +G Sbjct: 212 KTAYYTYLLPLVMGLIVSEALPTVDMGVTEEL---AMLMGEYFQVQDDVMDCFTPPERLG 268 Query: 223 KNIGEDFRNGK 233 K +G D ++ K Sbjct: 269 K-VGTDIQDAK 278 >gi|327261725|ref|XP_003215679.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like [Anolis carolinensis] Length = 387 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 118/270 (43%), Gaps = 45/270 (16%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ L + + +GN+ +VL GDFLL+ A + + Sbjct: 134 LAEITELIHTAFLVHRGIVNIGELTSSDGPLKDMQFGNKLAVLSGDFLLANASTNLATLQ 193 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYL-----------HVIKSKTAVLF- 173 + + +E +S A G+L Q +N + EE+ L HV S +A+L Sbjct: 194 NTKVVEIMS-----SAIGDLVQGIYYENSYLAEENGLTDDIGISIWKEHVFLSHSALLAK 248 Query: 174 --SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV--NEMGKNIGEDF 229 AA+E++ QN +YG ++ ++ +L D+ + E + + N+ Sbjct: 249 SCQAAMELAKHDVETQNKAF----NYGKHMSMSRKLNVDIQPFFSESSNDSVAFNLN--- 301 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGK-----ISVENLKKAFIIMRENRALVDTE 284 + PVIL Q RE W + + + I L++A + + +D Sbjct: 302 -----SAPVIL-HQELIGRET--WIKQVKEARTKGNLIDYSKLREAIKAGKGVTSAIDL- 352 Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVV 314 +G +A ++L C P S + +L +V Sbjct: 353 --CRFHGNRALEALECFPPSEARSALENIV 380 >gi|326375390|gb|ADZ57167.1| farnesyl pyrophosphate synthase [Lilium longiflorum] Length = 351 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 30/246 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV-LVG---DFLLSQAFCMVI 122 L IE++ L+ DD++D+S RRG+ L W V L+ LL ++ Sbjct: 87 LGWCIEWLQAYFLVLDDIMDNSHTRRGQ----LCWFRLPKVGLIAANDGILLRNHIPRIL 142 Query: 123 ETKSQEA------LEALSLVACTLAEGELRQLSLSKNLDVTEED--------YLHVIKSK 168 + +E L+ + V A G++ L + E+D Y +++ K Sbjct: 143 KRHFREKSYYVDLLDLFNEVEFQTASGQMLDLITTHE---GEKDLSKYKMPVYRRIVQYK 199 Query: 169 TAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 TA F + + L++G S A+K + +G FQ+ DD LD G+ +GK IG Sbjct: 200 TAYYSFYLPVACALLMSGENLSKFVAVKDILIEMGTYFQVQDDYLDCFGDPEVIGK-IGT 258 Query: 228 DFRNGKPTLPVILAFQRGTKRE-KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYR 286 D + K + ++ A +R + + K +++ SV +K + + N V EY Sbjct: 259 DIEDFKCSWLIVQALERANEGQMKVLYENYGKSDPTSVAKVKAVYAEL--NLQAVFAEYE 316 Query: 287 AYSYGQ 292 SY Q Sbjct: 317 GTSYVQ 322 >gi|290965788|gb|ADD70278.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Zonotrichia albicollis] Length = 376 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 24/259 (9%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ L+ + + +GN+ +VL GDFLL+ A + + + Sbjct: 124 LAEITELIHTAFLVHRGIVNIGELKSCDGPLKDMQFGNKMAVLSGDFLLANACTSLAQLQ 183 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS--------AAL 177 + + +E +S L +G + S S +T++ + K + + S AA+ Sbjct: 184 NTKVVELISSAIGDLVQGIYYENSKSSENCLTDDIGISRWKEQVFLRHSALLAKSCQAAM 243 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 E++ A +Q+ Q YG ++ ++ +L D+ + V E + N P Sbjct: 244 ELAKHSAEIQDMAFQ----YGKHMSMSHKLHSDLQPF---VKETSNDTMAFSLNSAP--- 293 Query: 238 VILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 A R + W I + GK ++ + KK ++ + + +G +A Sbjct: 294 ---AILHQEFRGREAWLKQIREAQGKGNIVDYKKLQEAIKAGKGVTSAIDLCRCHGNRAL 350 Query: 296 DSLRCLPDSSWKKSLMEVV 314 +L P S + +L +V Sbjct: 351 AALERFPPSEARDALANIV 369 >gi|325048848|dbj|BAJ79290.1| geranylgeranyl diphosphate synthase [Reticulitermes speratus] Length = 323 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 46/217 (21%), Positives = 87/217 (40%), Gaps = 5/217 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 E I + + +++ GK++R A L+ + ++ + H +L DD+ D+ Sbjct: 22 EKILEPLTHILQVPGKQIRAKFARAFNYWLKVPENKLNVVKDIAQMFHYNAVLIDDIRDN 81 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 S+LRRG A ++G +++ ++LL EA+ + + G+ + Sbjct: 82 SSLRRGIPVAHSIYGVASTINAANYLLLTGLKKAQSLNHPEAMTVCTEQFLEMYWGDGME 141 Query: 148 LSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 + N E+Y +IK KT + + L + + L L + FQ Sbjct: 142 IYWRDNYICPSLEEYKQLIKRKTRGYLMLEIALMQLFS----DNKADLTKLTTILALYFQ 197 Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + DD + K ED GK + P+I A + Sbjct: 198 IRDDYCNLFLPQYSKDKGFCEDLTEGKFSFPIIHAIR 234 >gi|67524307|ref|XP_660215.1| hypothetical protein AN2611.2 [Aspergillus nidulans FGSC A4] gi|40745560|gb|EAA64716.1| hypothetical protein AN2611.2 [Aspergillus nidulans FGSC A4] gi|259488050|tpe|CBF87199.1| TPA: geranylgeranyl diphosphate synthase, putative (JCVI) [Aspergillus nidulans FGSC A4] Length = 645 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 9/163 (5%) Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D S RRG+ A +++G+ ++ +++ QA + EA++ L L G+ Sbjct: 442 DCSPKRRGQPATHVLFGHSQAINSANYMFIQAVRATRSFHNPEAMDILLEELENLYLGQS 501 Query: 146 RQLSLSKNLDVTE-EDYLHVIKSKTAVLFSAALEVSSLIAGVQNS--VRQA------LKS 196 L NL +DY ++I +KT +F L + AG QA L Sbjct: 502 WDLQWKYNLTCPSIDDYTNMIDNKTGGMFRLLLRLLQNEAGPGGGYGCDQAPGLSLLLDR 561 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 G FQ+ DD ++ R K ED GK + P++ Sbjct: 562 LTTQFGRFFQIRDDYMNLRNSSYAQQKGCCEDLDEGKFSYPIV 604 >gi|20135548|gb|AAM08927.1| farnesyl pyrophosphate synthase [Malus x domestica] Length = 342 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 65/280 (23%), Positives = 122/280 (43%), Gaps = 43/280 (15%) Query: 40 SGGKRLRPMLTLATALMLEYRG----DNHVLLACA----IEFIHTATLLHDDVVDDSALR 91 GGK R + + + +L+ +G ++ + LA A IE++ L+ DD++D S R Sbjct: 44 PGGKLNRGLSVIDSYQLLQ-QGRELTEDEIFLASALGWCIEWLQAFFLVLDDIMDGSHTR 102 Query: 92 RGK-------------VAARLVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEAL-EA 132 RG+ V +V N ++ + + + + + E + Q A + Sbjct: 103 RGQPCWFRLPKVGMIAVNDGVVLRNHIPRILRKYFREKPYYVDLLDLFNEVEFQTASGQM 162 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVR 191 + L+ E +L + SLS + +++ KTA F ++ + L++G + Sbjct: 163 IDLITTIEGEKDLSKYSLSI--------HRRIVQYKTAYYSFYLSVACALLMSGEELEKH 214 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +K+ + +GI FQ+ DD LD G+ +GK IG D + K + V+ A + + +K Sbjct: 215 IDVKNILVEMGIYFQVQDDYLDCFGDPETIGK-IGTDIEDFKCSWLVVKALELCNEEQKK 273 Query: 252 FWKSTINDGKISVENLKKAFIIMRE---NRALVDTEYRAY 288 N GK EN+ + +E D E ++Y Sbjct: 274 VLHE--NYGKPDPENVATVKALYKELDIEGVFADYESKSY 311 >gi|332020708|gb|EGI61113.1| Farnesyl pyrophosphate synthetase [Acromyrmex echinatior] Length = 362 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 56/262 (21%) Query: 29 MIPDVVKYLI------FSGGKRLRPMLTLATALMLEYR--------GDNHV----LLACA 70 +IPD+ K++ GGK++R A AL+ Y+ + ++ +LA Sbjct: 47 IIPDIAKWMAKVLQYNVPGGKKIR-----ALALVYAYKVLAPSDQLTEENIRLVRILAWC 101 Query: 71 IEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTSVLVGDFLLSQ- 116 +E + L+ DD+ D S +RRG+ V L+ N L+ + + Sbjct: 102 VELMQAFLLVIDDIQDRSLIRRGQPCWYRYNDLGLAAVNDSLLLENAIFYLIKKYFKGKD 161 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLS----KNLDV-TEEDYLHVIKSKTAV 171 + ++ET L+ T+ L LS + +LD+ T Y +++ KT+ Sbjct: 162 CYVTLLETFHDTILK-------TIIGQSLDMLSTNFGKKPDLDMFTMNRYNSIVEYKTSH 214 Query: 172 L-FSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 F + ++ +AG+++ RQA K+ + +G FQ+ D DY G +++ D Sbjct: 215 YSFILPITIAMHLAGIKDPEMFRQA-KTILLEMGHLFQVQD---DYLGCYSDVHSKDYTD 270 Query: 229 FRNGKPTLPVILAFQRGTKREK 250 + GK T +++A QR T ++ Sbjct: 271 IQEGKCTWLIVVALQRATPEQR 292 >gi|313616871|gb|EFR89544.1| polyprenyl synthetase [Listeria innocua FSL S4-378] Length = 127 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 29/46 (63%) Query: 198 GMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G LG+AFQ++DDVLDY +GK + D + G +LP+I A + Sbjct: 6 GHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMK 51 >gi|320583113|gb|EFW97329.1| Farnesyl pyrophosphate synthase [Pichia angusta DL-1] Length = 351 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 16/199 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET- 124 +L A+E + L+ DD++D S RRG+ V G + F+L A ++++ Sbjct: 83 ILGWAVELLQAYFLVADDMMDKSITRRGQPCWYRVDGVNEIAINDSFMLEAAIYVLLKKY 142 Query: 125 --KSQEALEALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTAVL-F 173 K ++ L L + EL QL + ++D+++ + ++ KTA F Sbjct: 143 FRKDSYYVDLLELFHEVTFQTELGQLLDLLTAPEDHVDLSKFSLSKHSFIVTFKTAYYSF 202 Query: 174 SAALEVSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + ++ +AGV + ++QA + + LG FQ+ DD LD G+ ++GK IG D + Sbjct: 203 YLPVALAMYMAGVSDEKDLKQA-QDVLIPLGEYFQIQDDYLDCFGKPEDIGK-IGTDILD 260 Query: 232 GKPTLPVILAFQRGTKREK 250 K + + A + T ++ Sbjct: 261 NKCSWVINTALKICTPEQR 279 >gi|332523798|ref|ZP_08400050.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176] gi|332315062|gb|EGJ28047.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176] Length = 319 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 90/194 (46%), Gaps = 24/194 (12%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLL-ACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 G R RP+LT + + + A AIE IH A+++ DD++D R G Sbjct: 43 NGNRFRPLLTYYGYTLYSNELNETIYHSATAIELIHKASIIIDDIIDQDEKRHGLPTVHQ 102 Query: 100 VWGNQTSVLVGDFLLSQAFCM-VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 + ++++ FLL + C+ ++ + S + + +G L +L++ N+ ++E Sbjct: 103 QYSINEALIITVFLLGK--CIELLSNIDDSTIRLFSQMISKMCQGTLSELNIDDNVTLSE 160 Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNS----VRQALKSYGMNLGIAFQLVDD---- 210 Y ++ ++T+ + +SLI G+++ Q L++ G LG FQL++D Sbjct: 161 VKY--ILDNQTSQVIQ-----NSLIIGMKSYDDSIYNQYLETIGYKLGYLFQLLNDCEAY 213 Query: 211 -----VLDYRGEVN 219 + Y+G N Sbjct: 214 FNPKFAMKYKGNAN 227 >gi|261329450|emb|CBH12431.1| farnesyl pyrophosphate synthase, putative [Trypanosoma brucei gambiense DAL972] Length = 367 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 32/191 (16%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---- 126 IEF+ L+ DD++D+S RRGK G + D LL +++ ++ Sbjct: 92 IEFLQAHYLVEDDIMDNSVTRRGKPCWYRHPGVTVQCAINDGLLLKSWTHMMAMHFFADR 151 Query: 127 ---QEALEALSLVACTLAEGEL----------------RQLSLSKNLDVTEEDYLHVIKS 167 Q+ L + V T A G+L Q + + + T +Y ++K Sbjct: 152 PFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQPTTTDFAEFTLSNYKRIVKY 211 Query: 168 KTAVL-----FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 KTA L VS + V V + L M +G FQ+ DDV+D +G Sbjct: 212 KTAYYTYLLPLVMGLIVSEALPTVDMGVTEEL---AMLMGEYFQVQDDVMDCFTPPERLG 268 Query: 223 KNIGEDFRNGK 233 K +G D ++ K Sbjct: 269 K-VGTDIQDAK 278 >gi|112363472|gb|ABI16061.1| farnesyl pyrophosphate synthase [Leishmania donovani] Length = 362 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 26/188 (13%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQ- 127 IE + L+ DD++D S RRGK L G T V + D LL+ A M + + Sbjct: 87 IEMLQAHFLVEDDIMDHSKTRRGKPCWYLHPGVTTQVAINDGLILLAWATQMALHYFADR 146 Query: 128 ----EALEALSLVACTLAEGELRQLS-------LSKN---------LDVTEEDYLHVIKS 167 E L V T G+L ++ L N ++ T ++ ++ Sbjct: 147 PFLAEVLRVFHDVDLTTTIGQLYDVTSMVDSAKLDANVAHANTTDYIEYTPFNHRRIVVY 206 Query: 168 KTAVL-FSAALEVSSLIAGVQNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA + L + L++G V ++A M +G FQ+ DDV+D ++GK I Sbjct: 207 KTAYYTYWLPLVMGLLVSGTVEKVDKEATHKVAMVMGEYFQVQDDVMDCFTPPEKLGK-I 265 Query: 226 GEDFRNGK 233 G D + K Sbjct: 266 GTDIEDAK 273 >gi|73973963|ref|XP_539071.2| PREDICTED: similar to candidate tumor suppressor protein [Canis familiaris] Length = 400 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 120/270 (44%), Gaps = 31/270 (11%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKT--------AVLFSAA 176 + + +E L+ L +G + S S K +TE+ + K +T A AA Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSAKENHITEDIGISTWKEQTFLSHGALLAKSCQAA 267 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +E++ A VQ+ Q YG ++ ++ ++ D+ + + + + + Sbjct: 268 MELAKHDADVQDMAFQ----YGKHMAMSHKINSDLQPF------IKEKTSDSVTFNLNSA 317 Query: 237 PVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292 PV+L Q R+ W I + G++ L++ + + +D +G Sbjct: 318 PVVL-HQEFLGRD--LWMKQIGEAQEKGRLDYAKLRETIKAGKGVTSAIDL---CRYHGN 371 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 372 KALEALESFPPSEARSALENIV-FAVTRFS 400 >gi|146100853|ref|XP_001468963.1| farnesyl pyrophosphate synthase [Leishmania infantum] gi|321399468|emb|CBZ08669.1| farnesyl pyrophosphate synthase [Leishmania infantum JPCM5] Length = 362 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 26/188 (13%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQ- 127 IE + L+ DD++D S RRGK L G T V + D LL+ A M + + Sbjct: 87 IEMLQAHFLVEDDIMDHSKTRRGKPCWYLHPGVTTQVAINDGLILLAWATQMALHYFADR 146 Query: 128 ----EALEALSLVACTLAEGELRQLS-------LSKN---------LDVTEEDYLHVIKS 167 E L V T G+L ++ L N ++ T ++ ++ Sbjct: 147 PFLAEVLRVFHDVDLTTTIGQLYDVTSMVDSAKLDANVAHANTTDYIEYTPFNHRRIVVY 206 Query: 168 KTAVL-FSAALEVSSLIAGVQNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA + L + L++G V ++A M +G FQ+ DDV+D ++GK I Sbjct: 207 KTAYYTYWLPLVMGLLVSGTVEKVDKEATHKVAMVMGEYFQVQDDVMDCFTPPEKLGK-I 265 Query: 226 GEDFRNGK 233 G D + K Sbjct: 266 GTDIEDAK 273 >gi|322499090|emb|CBZ34162.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 362 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 26/188 (13%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIETKSQ- 127 IE + L+ DD++D S RRGK L G T V + D LL+ A M + + Sbjct: 87 IEMLQAHFLVEDDIMDHSKTRRGKPCWYLHPGVTTQVAINDGLILLAWATQMALHYFADR 146 Query: 128 ----EALEALSLVACTLAEGELRQLS-------LSKN---------LDVTEEDYLHVIKS 167 E L V T G+L ++ L N ++ T ++ ++ Sbjct: 147 PFLAEVLRVFHDVDLTTTIGQLYDVTSMVDSAKLDANVAHANTTDYIEYTPFNHRRIVVY 206 Query: 168 KTAVL-FSAALEVSSLIAGVQNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA + L + L++G V ++A M +G FQ+ DDV+D ++GK I Sbjct: 207 KTAYYTYWLPLVMGLLVSGTVEKVDKEATHKVAMVMGEYFQVQDDVMDCFTPPEKLGK-I 265 Query: 226 GEDFRNGK 233 G D + K Sbjct: 266 GTDIEDAK 273 >gi|149032544|gb|EDL87422.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Rattus norvegicus] Length = 153 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 1/136 (0%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 KYL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S LRRG Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + Sbjct: 77 PVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDTY 136 Query: 155 DV-TEEDYLHVIKSKT 169 TEE+Y ++ KT Sbjct: 137 TCPTEEEYKAMVLQKT 152 >gi|50292709|ref|XP_448787.1| hypothetical protein [Candida glabrata CBS 138] gi|49528100|emb|CAG61757.1| unnamed protein product [Candida glabrata] Length = 351 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 40/247 (16%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD-FLLSQAFCMVIE- 123 LL IE + L+ DD++D S RRG+ V N + + D F+L A ++++ Sbjct: 83 LLGWCIELLQAYFLVADDMMDKSITRRGQPCWYRV-KNVNEIAINDAFMLEAAIYVLLKK 141 Query: 124 ------------------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 T E + L L+ +L + SLSK + ++ Sbjct: 142 HFRNDSYYVDLLELFHDVTFQTELGQLLDLITAPEDHVDLSKFSLSK--------HSFIV 193 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 KTA F + ++ AGV +S ++QA + + LG FQ+ DD LD G ++G Sbjct: 194 IFKTAYYSFYLPVALAMYAAGVNDSKDLKQA-QDVLIPLGEYFQIQDDYLDCFGTPEQIG 252 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALV 281 K IG D ++ K + + A + ++++ E N K F ++ + Sbjct: 253 K-IGTDIQDNKCSWIINKALELANEKQRKILDENYGRKDSKCEANCKAVFSELK-----I 306 Query: 282 DTEYRAY 288 D YR Y Sbjct: 307 DIHYREY 313 >gi|325143454|gb|EGC65779.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240013] Length = 61 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 6/55 (10%) Query: 3 MLEDLTL------KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL 51 MLE+L +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ Sbjct: 1 MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTI 55 >gi|2281328|gb|AAC45506.1| GerCC [Lactococcus lactis subsp. cremoris MG1363] Length = 92 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 4/57 (7%) Query: 34 VKYLIF----SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 VK IF +GGK LRP L + + + LA ++E +HTATL+HDDV+D Sbjct: 36 VKSAIFDIFDAGGKMLRPAYLLLFSGFTDLSESERLALAASVEMMHTATLVHDDVID 92 >gi|14573639|gb|AAK68152.1| farnesyldiphosphate synthase [x Citrofortunella microcarpa] Length = 341 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 41/261 (15%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQTSVLVGDFL 113 L IE++ L+ DD++D S RRG+ +AA ++ N S ++ + Sbjct: 77 LGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHF 136 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 + + + + E + Q A + + L+ E +L + SL LH ++ Sbjct: 137 RDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP----------LHRRIV 186 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + L+AG +K + +GI FQ+ DD LD G +GK Sbjct: 187 QYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK- 245 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKIS---VENLKKAFIIMRENRALV 281 +G D + K + V+ A + + +KN N GK+ V +K+ + + A V Sbjct: 246 VGTDIEDYKCSWLVVKALELCNEEQKNVVHE--NYGKVDPACVAKVKELYKTLDLEGAFV 303 Query: 282 DTEYRAYSYGQKAKDSLRCLP 302 + E +Y +K S+ P Sbjct: 304 EYEKESY---EKLTKSIEAHP 321 >gi|85543983|pdb|1YHK|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase gi|85543984|pdb|1YHL|A Chain A, Structure Of The Complex Of Trypanosoma Cruzi Farnesyl Diphosphate Synthase With Risedronate, Dmapp And Mg+2 gi|288563001|pdb|3IBA|A Chain A, Crystal Structure Of The Complex Of Trypanosoma Cruzi Farnesyl Diphosphate Synthase With Zoledronate, Ipp And Mg2+ gi|288563002|pdb|3ICK|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer In Complex With Minodronate And Isopentenyl Disphosphate gi|288563003|pdb|3ICM|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer In Complex With Isopentenyl Pyrophosphate, Mg2+ And 1-(2- Hydroxy-2,2-Bis-Phosphono-Ethyl)-3-Phenyl-Pyridinium gi|288563004|pdb|3ICN|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer In Complex With Isopentenyl Pyrophosphate And 3-Fluoro-1-(2- Hydroxy-2,2-Bis-Phosphono-Ethyl)-Pyridinium gi|288563005|pdb|3ICZ|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer In Complex With 1-(2,2-Bis-Phosphono-Ethyl)-3-Butyl-Pyridinium And Isopentenyl Pyrophosphate gi|288563006|pdb|3ID0|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer In Complex With 3-Fluoro-1-(2-Hydroxy-2,2-Bisphosphono-Ethyl) Pyridinium gi|14647139|gb|AAK71861.1| farnesyl pyrophosphate synthase [Trypanosoma cruzi] Length = 362 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 55/269 (20%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFS------GGKRLRPMLT-------LATALMLEY 59 ++V +L ++ S E+ P+ +YL GGK R M LA E Sbjct: 12 DEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEA 71 Query: 60 RGDNHVLLACA----IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 + + AC IEF+ L+ DD++D S +RRGK G T + D ++ Sbjct: 72 TKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGVTTQCAINDGIIL 131 Query: 116 QAFCMVI-----------------------ETKSQEALEALSLVACTLAEGELRQLSLSK 152 +++ ++ T + + S+ + E+ Q + Sbjct: 132 KSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNKLDPEVAQPMTTD 191 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL--------GIA 204 + T Y ++K KT ++ L L+ G+ V +A S MNL G Sbjct: 192 FAEFTPAIYKRIVKYKT-TFYTYLL---PLVMGL--FVSEAAASVEMNLVERVAHLIGEY 245 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 FQ+ DDV+D ++GK +G D + K Sbjct: 246 FQVQDDVMDCFTPPEQLGK-VGTDIEDAK 273 >gi|167630013|ref|YP_001680512.1| farnesyltranstransferase, putative [Heliobacterium modesticaldum Ice1] gi|167592753|gb|ABZ84501.1| farnesyltranstransferase, putative [Heliobacterium modesticaldum Ice1] Length = 273 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 4/156 (2%) Query: 48 MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107 +L L TA M LA A++FI T T +H + D+ + R A + + SV Sbjct: 49 ILVLLTARMFGTPSLKTNCLASAVQFIQTGTDIHRTIPDEGRVLRHLEKATIPF----SV 104 Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 LVGD Q ++ E + E L +S C + EG + + L + T+E + + Sbjct: 105 LVGDLYYCQFLSLLCEGELLEYLTPISRTVCRVHEGGVLRKELVEPGFATDEHIRAMREM 164 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 + A L A V+ I G AL+ G +G+ Sbjct: 165 EFASLPLLACRVAGEICGASPRQVVALEQLGRAVGL 200 >gi|62079229|ref|NP_001014271.1| decaprenyl-diphosphate synthase subunit 2 [Rattus norvegicus] gi|73620007|sp|Q5U2R1|DLP1_RAT RecName: Full=Decaprenyl-diphosphate synthase subunit 2; AltName: Full=All-trans-decaprenyl-diphosphate synthase subunit 2; AltName: Full=Decaprenyl pyrophosphate synthase subunit 2 gi|55250165|gb|AAH85898.1| Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Rattus norvegicus] Length = 401 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 64/271 (23%), Positives = 121/271 (44%), Gaps = 33/271 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ S L+ + + +GN+ +VL GDFLL+ A + + Sbjct: 149 LAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKIAVLSGDFLLANACNGLALLQ 208 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY-LHVIKSKT--------AVLFSAA 176 + + +E L+ L +G ++ S S + +D + K +T A AA Sbjct: 209 NTKVVELLASALMDLVQGIYQENSASTQGNPIPDDIRISTWKEQTFLSHCALLAKSCKAA 268 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +E++ A VQ+ Q YG ++ ++ ++ D+ + + K + + Sbjct: 269 MELAKHDAAVQDMAFQ----YGKHMAMSHKINSDLQPFIKDKASDSKTFNLN------SA 318 Query: 237 PVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVD-TEYRAYSYG 291 PV+L Q R+ W I + G+++ L++ + + +D Y +G Sbjct: 319 PVVL-HQEFLGRD--LWIKQIGEAQEKGRLNYTKLRETIKAGKGVTSAIDLCRY----HG 371 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 372 NKALEALESFPPSEARSALENIV-FAVTRFS 401 >gi|71425811|ref|XP_813173.1| farnesyl pyrophosphate synthase [Trypanosoma cruzi strain CL Brener] gi|70878032|gb|EAN91322.1| farnesyl pyrophosphate synthase, putative [Trypanosoma cruzi] Length = 346 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 55/269 (20%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFS------GGKRLRPMLT-------LATALMLEY 59 ++V +L ++ S E+ P+ +YL GGK R M LA E Sbjct: 12 DEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEA 71 Query: 60 RGDNHVLLACA----IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 + + AC IEF+ L+ DD++D S +RRGK G T + D ++ Sbjct: 72 TKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGVTTQCAINDGIIL 131 Query: 116 QAFCMVI-----------------------ETKSQEALEALSLVACTLAEGELRQLSLSK 152 +++ ++ T + + S+ + E+ Q + Sbjct: 132 KSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNKLDPEVAQPMTTD 191 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL--------GIA 204 + T Y ++K KT ++ L L+ G+ V +A S MNL G Sbjct: 192 FAEFTPAIYKRIVKYKT-TFYTYLL---PLVMGL--FVSEAAASVEMNLVERVAHLIGEY 245 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 FQ+ DDV+D ++GK +G D + K Sbjct: 246 FQVQDDVMDCFTPPEQLGK-VGTDIEDAK 273 >gi|157136626|ref|XP_001663796.1| farnesyl-pyrophosphate synthetase [Aedes aegypti] gi|108880982|gb|EAT45207.1| farnesyl-pyrophosphate synthetase [Aedes aegypti] Length = 430 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 19/202 (9%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE--- 123 L IE L+ DD +D S RRG+ + + S + ++ A V++ Sbjct: 168 LGWVIEMFQAVFLICDDAMDGSQTRRGQPCWYKLEDVKLSGINDALMIDAAIFYVLKKQF 227 Query: 124 ------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED---YLHVIKSKTAVL-F 173 +K E + + +LR S +DVT+ Y ++ KTA F Sbjct: 228 GDEPYYSKLVETFNEIKFITTIGQSLDLR----SARMDVTKYTMDLYKSIVCHKTAYYTF 283 Query: 174 SAALEVSSLIAGVQNS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 + ++ + G + V + K+ + +G+ +Q DD LD G+ GK IG D G Sbjct: 284 YLPVALAMHMTGFTDPEVFRQTKTILLEIGLFYQTQDDFLDCFGDPAVTGK-IGTDIEEG 342 Query: 233 KPTLPVILAFQRGTKREKNFWK 254 K T ++A QR + +K K Sbjct: 343 KCTWLSVVAMQRASDEQKELMK 364 >gi|322796022|gb|EFZ18646.1| hypothetical protein SINV_13860 [Solenopsis invicta] Length = 77 Score = 43.5 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 32/55 (58%) Query: 50 TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 TL + +M +A E IH+A+LLHDDV+D S +RRGK + ++W + Sbjct: 22 TLLSKIMKNVLLQTQRQIAMIAEMIHSASLLHDDVIDQSDIRRGKPSVNVMWSQK 76 >gi|55792579|gb|AAV65383.1| plastid geranylgeranyl diphosphate synthase [Prototheca wickerhamii] Length = 195 Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH--DDVV 85 E + ++Y + GGKR+RP L LA ++ + + ACA+E IHT +L+H + Sbjct: 99 ERLHSAMRYSLLGGGKRVRPALCLAACELVGGCLEVAMPAACAVEMIHTMSLIHDDLPAM 158 Query: 86 DDSALRRGKVAARLVWG 102 DD +RRG+ A +G Sbjct: 159 DDDDVRRGQPANHRAFG 175 >gi|25452945|sp|O24241|FPPS1_PARAR RecName: Full=Farnesyl pyrophosphate synthase 1; Short=FPP synthase 1; Short=FPS 1; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1; AltName: Full=Dimethylallyltranstransferase 1; AltName: Full=Farnesyl diphosphate synthase 1; AltName: Full=Geranyltranstransferase 1 gi|1532050|emb|CAA57892.1| farnesyl diphosphate synthase [Parthenium argentatum] Length = 342 Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 33/213 (15%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-----------VAAR---LVWGN 103 DN + LA A IE++ L+ DD++D+S RRG+ +AA ++ N Sbjct: 69 DNEIFLAAALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGIILRNN 128 Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTE 158 +L F + +++ ++ + S L+ + E +L + SLS Sbjct: 129 VPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSI------ 182 Query: 159 EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + +++ KTA F + + L+ G + +K+ + +G FQ+ DD LD G Sbjct: 183 --HRRIVQYKTAYYSFYLPVACALLMFGEDLEKHEEVKNVLVEMGTYFQVQDDYLDCFGA 240 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +GK IG D + K + V+ A + + +K Sbjct: 241 PEVIGK-IGTDIEDFKCSWLVVKALELSNEEQK 272 >gi|308505412|ref|XP_003114889.1| CRE-FDPS-1 protein [Caenorhabditis remanei] gi|308259071|gb|EFP03024.1| CRE-FDPS-1 protein [Caenorhabditis remanei] Length = 351 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 31/226 (13%) Query: 41 GGKRLRPMLTLAT--ALMLEYRGDNHVL-----LACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R L + T AL R + L A +E I + L+ DD++D+S RRG Sbjct: 51 GGKYSRASLCVDTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDIMDNSETRRG 110 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCM--VIETKSQEALEA-LSLVACTLAEGELRQLSL 150 K W + VG ++ AF M +E + AL ++L A + +Q +L Sbjct: 111 KQC----WFRREG--VGMSAINDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSKQKTL 164 Query: 151 -SKNLDV---------TEEDYLHVIKSKTA--VLFSAALEVSSLIAGVQNSVRQALKSYG 198 + LD T + Y ++++KT+ +F L+++ +I+ V + A+K Sbjct: 165 IGQFLDTSSVNQIASFTWDRYELMVENKTSHYTVFH-PLQMALIISDVL-AYHGAVKKAA 222 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 +G FQ DD LD G+ GK IG D ++GK T + A Q+ Sbjct: 223 YQIGFLFQSQDDFLDVYGDPTITGK-IGTDIQDGKCTWLAVRALQK 267 >gi|50424267|ref|XP_460720.1| DEHA2F08272p [Debaryomyces hansenii CBS767] gi|49656389|emb|CAG89060.1| DEHA2F08272p [Debaryomyces hansenii] Length = 350 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 110/263 (41%), Gaps = 37/263 (14%) Query: 20 LKRICSDVEMIPDVVKYLIFS------GGKRLRPMLTLATALMLEYRGDNHV-------- 65 LK I +M D + + + + GGK R + + T +L N + Sbjct: 21 LKAILIGYKMPQDAIDWFVGNLNYNTPGGKLNRGLSVIDTYCILNNTTANDLSSEEYSKV 80 Query: 66 -LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 LL IE + L+ DD++D S RRG+ L G + F+L A ++++ Sbjct: 81 ALLGWCIELLQAYFLVADDMMDHSKTRRGQPCWYLNEGVGNIAINDSFMLEGALYILLKK 140 Query: 125 ---KSQEALEALSLVACTLAEGELRQLS--LSKNLDVTEEDYLHVIKSKTAVLFSAA--- 176 + ++ L L + EL QL ++ + ++ + D + K V++ A Sbjct: 141 HFRNEKYYVDLLDLFHEVTFQTELGQLIDLITADEEIVDLDKFSLSKHSFIVIYKTAYYS 200 Query: 177 ----LEVSSLIAGVQN-----SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 + ++ ++G+ + VR L + LG FQ+ DD LD G ++GK IG Sbjct: 201 FYLPVALAMFMSGINSEQDLKQVRDIL----IPLGEYFQIQDDFLDCFGTPEQIGK-IGT 255 Query: 228 DFRNGKPTLPVILAFQRGTKREK 250 D ++ K + V A + ++ Sbjct: 256 DIKDNKCSWVVNQALLHANEEQR 278 >gi|304406152|ref|ZP_07387809.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] gi|304344736|gb|EFM10573.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] Length = 304 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 35/257 (13%) Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGN-----QTSVLVGDFLLSQAFCMVI 122 A A+E + A ++DD+ D K ++ W +V +G LS + + Sbjct: 65 AAAVELMILALDIYDDLQD-------KDNPKVPWSQIDPAIALNVAIGLQSLSMDLILTV 117 Query: 123 ETKSQEALEALSLVACTLAEGELR----QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 S L A A L +G LR Q + +N +TEE+ L +I+ K+ L +AA Sbjct: 118 PGPSDRKLRA----ATYLNQGVLRAVNGQHTDLRNEPMTEEECLQMIEEKSGSLVAAACL 173 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 V + +A +++ + + +YG +GIA QL +DV G +N D K TLP+ Sbjct: 174 VGAALATDEHA--ELIGAYGRAIGIAAQLRNDV---EGMQRWETRN---DLLERKQTLPI 225 Query: 239 ILAFQRGTKREKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEY---RAYSYGQKA 294 ++ + E+ + DG+I+ E LK+ IM + EY A +A Sbjct: 226 QYVLEQ--QSEEAALVRSYYDGEITQAELLKRKAEIMDYIQGCGSVEYGLVHAKLKQYEA 283 Query: 295 KDSLRCLP-DSSWKKSL 310 + + LP D WK+ L Sbjct: 284 EAGIDQLPVDEMWKERL 300 >gi|1346028|sp|P49351|FPPS1_LUPAL RecName: Full=Farnesyl pyrophosphate synthase 1; Short=FPP synthase 1; Short=FPS 1; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1; AltName: Full=Dimethylallyltranstransferase 1; AltName: Full=Farnesyl diphosphate synthase 1; AltName: Full=Geranyltranstransferase 1 gi|558923|gb|AAA86687.1| farnesyl pyrophosphate synthase [Lupinus albus] Length = 342 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 41/268 (15%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-----------VAAR---LVWGN 103 D+ + LA A IE++ L+ DD++D+S RRG+ +AA L+ + Sbjct: 69 DDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNH 128 Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTE 158 +L F + +++ ++ + S L+ E +L + +LS Sbjct: 129 IPRILKKHFRGKPYYADLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLS------- 181 Query: 159 EDYLH--VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 LH +++ KTA F + + L+ G +K+ +++G FQ+ DD LD Sbjct: 182 ---LHRRIVQYKTAYYSFYLPVACALLMVGENLDNHIDVKNILVDMGTYFQVQDDYLDCF 238 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 G +GK IG D + K + V+ A + +K N GK N+ K + Sbjct: 239 GAPETIGK-IGTDIEDFKCSWLVVKALELSNDEQKKVLYD--NYGKPDPANVAKVKALYD 295 Query: 276 E-NRALVDTEYRAYSYGQKAKDSLRCLP 302 E N V TEY + SY +K S+ P Sbjct: 296 ELNLQGVFTEYESKSY-EKLVTSIEAHP 322 >gi|115439441|ref|NP_001044000.1| Os01g0703400 [Oryza sativa Japonica Group] gi|2073375|dbj|BAA19856.1| farnesyl pyrophosphate synthase [Oryza sativa Japonica Group] gi|4063829|dbj|BAA36276.1| farnesyl diphosphate synthase [Oryza sativa Japonica Group] gi|21039025|dbj|BAB92292.2| putative farnesyl pyrophosphate synthetase [Oryza sativa Japonica Group] gi|113533531|dbj|BAF05914.1| Os01g0703400 [Oryza sativa Japonica Group] gi|215692629|dbj|BAG88049.1| unnamed protein product [Oryza sativa Japonica Group] Length = 353 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 23/276 (8%) Query: 41 GGKRLRPMLTLATALML---EYRGDNHVLLACA----IEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + ML + LAC IE++ L+ DD++D+S RRG Sbjct: 56 GGKCNRGISVIDSFKMLKGTDVLNKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRG 115 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL------VACTLAEGELRQ 147 + V + +L +++ + L + L V A G+L Sbjct: 116 QPCWFRVPQVGLIAVNDGIILRNHISRILQRHFKGKLYYVDLIDLFNEVEFKTASGQLLD 175 Query: 148 L--SLSKNLDVTEED---YLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNL 201 L + D+T+ + + +++ KTA F + + L++G +K+ + + Sbjct: 176 LITTHEGEKDLTKYNLTVHRRIVQYKTAYYSFYLPVACALLLSGENLDNFGDVKNILVEM 235 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G FQ+ DD LD G+ +GK IG D + K + V+ A +R + +K+ N GK Sbjct: 236 GTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADENQKHILFE--NYGK 292 Query: 262 ISVENLKKAFIIMRE-NRALVDTEYRAYSYGQKAKD 296 E + K + +E N V EY SY + D Sbjct: 293 PDPECVAKVKDLYKELNLEAVFHEYERESYNKLIAD 328 >gi|326490760|dbj|BAJ90047.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326531764|dbj|BAJ97886.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 352 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 15/198 (7%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL-----SQAFCMV 121 L IE++ L+ DD++DDS RRG+ V + V D +L S+ + Sbjct: 88 LGWCIEWLQAFFLVLDDIMDDSHTRRGQPCWFRV-PQVGFIAVNDGILLRNHISRMLRLH 146 Query: 122 IETKSQEA--LEALSLVACTLAEGELRQL--SLSKNLDVTEED---YLHVIKSKTAVL-F 173 + K A L+ + V A G++ L + D+T+ + + +++ KTA F Sbjct: 147 FKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGEKDLTKYNIGVHRRIVQFKTAYYSF 206 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + + L++G A+++ + +G FQ+ DD LD G+ +GK IG D + K Sbjct: 207 YLPVACALLLSGENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYK 265 Query: 234 PTLPVILAFQRGTKREKN 251 + V+ A +R + +K+ Sbjct: 266 CSWLVVQALERADESQKS 283 >gi|89894773|ref|YP_518260.1| hypothetical protein DSY2027 [Desulfitobacterium hafniense Y51] gi|89334221|dbj|BAE83816.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 326 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 22/183 (12%) Query: 65 VLLACAIEFIHTATLLHDDVVD---DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 V +A A+E A + DD+ D D R AA+ + N ++++ FL +A + Sbjct: 71 VQVAVAMELYALAADIFDDIEDQDNDELPWRTIPAAQAI--NTANLIL--FLSFKALAAI 126 Query: 122 ----IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + ++ + + + + AC G+ ++ +T Y + K+ L + Sbjct: 127 NDQALYRQANDIFQTMGITAC---HGQNQEFLYEGQDAITLAQYFDTARKKSGALTAGTC 183 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD-YRGEVNEMGKNIGEDFRNGKPTL 236 ++++++AG S+ L+ +G NLGI Q+ +D+ D +R E D R GK TL Sbjct: 184 KLAAVLAGCDTSLILDLEKFGQNLGIISQIKNDLRDLFRVEAK-------SDVRLGKKTL 236 Query: 237 PVI 239 P++ Sbjct: 237 PLV 239 >gi|212274364|ref|NP_001130900.1| hypothetical protein LOC100192004 [Zea mays] gi|194690400|gb|ACF79284.1| unknown [Zea mays] Length = 355 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 29/208 (13%) Query: 66 LLACA----IEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTS-V 107 LAC IE++ L+ DD++D+S RRG+ V ++ N S + Sbjct: 86 FLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRI 145 Query: 108 LVGDFLLSQAFCMVIETKSQEALEALS---LVACTLAEGELRQLSLSKNLDVTEEDYLHV 164 L F + VI+ ++ + S L T EGE + L+ NL V H+ Sbjct: 146 LQRHFKGKPYYVDVIDLFNEVEFKTASGQMLDLITTHEGE-KDLT-KYNLTVRR----HI 199 Query: 165 IKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 ++ KTA F + + L+AG +K+ + +G Q+ DD LD G+ +GK Sbjct: 200 VQYKTAYYSFYLPVACALLLAGENLDNFGDVKNILVEMGTYLQVQDDYLDCFGDPEFIGK 259 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREKN 251 IG D + K + V+ A + +++KN Sbjct: 260 -IGTDIEDYKCSWLVVQALEHADEKQKN 286 >gi|125571728|gb|EAZ13243.1| hypothetical protein OsJ_03166 [Oryza sativa Japonica Group] Length = 375 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 23/276 (8%) Query: 41 GGKRLRPMLTLATALML---EYRGDNHVLLACA----IEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + ML + LAC IE++ L+ DD++D+S RRG Sbjct: 78 GGKCNRGISVIDSFKMLKGTDVLNKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRG 137 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL------VACTLAEGELRQ 147 + V + +L +++ + L + L V A G+L Sbjct: 138 QPCWFRVPQVGLIAVNDGIILRNHISRILQRHFKGKLYYVDLIDLFNEVEFKTASGQLLD 197 Query: 148 L--SLSKNLDVTEED---YLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNL 201 L + D+T+ + + +++ KTA F + + L++G +K+ + + Sbjct: 198 LITTHEGEKDLTKYNLTVHRRIVQYKTAYYSFYLPVACALLLSGENLDNFGDVKNILVEM 257 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 G FQ+ DD LD G+ +GK IG D + K + V+ A +R + +K+ N GK Sbjct: 258 GTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADENQKHILFE--NYGK 314 Query: 262 ISVENLKKAFIIMRE-NRALVDTEYRAYSYGQKAKD 296 E + K + +E N V EY SY + D Sbjct: 315 PDPECVAKVKDLYKELNLEAVFHEYERESYNKLIAD 350 >gi|62959175|gb|AAY23695.1| farnesyl diphosphate synthase [Planococcus sp. JL-69] Length = 144 Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 13/134 (9%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQL 148 +RRG W T+VL GD L + F +V + +A +LA R + Sbjct: 12 MRRGMPTVHRKWDEATAVLAGDALQTLGFELVACPDCHPDAVVRADLALSLARAAGARGM 71 Query: 149 SLSKNLDVTEE--------DYLHVIKS-KTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 L + LD+ E D + +++ KT LF + E + +A + L Y Sbjct: 72 VLGQALDMAAEQSDTPLSLDQITALQAGKTGALFGWSAEAGARMARADIT---PLTGYAR 128 Query: 200 NLGIAFQLVDDVLD 213 LG+AFQ+ DD+LD Sbjct: 129 ALGLAFQIADDILD 142 >gi|224135433|ref|XP_002322072.1| predicted protein [Populus trichocarpa] gi|222869068|gb|EEF06199.1| predicted protein [Populus trichocarpa] Length = 236 Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 14/196 (7%) Query: 32 DVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 + + +L F+ + P L +A ++ D + A A+ +H A L H+ ++ S Sbjct: 28 EPMHHLTFAAPRTTAPALCIAACELVGGNRDQAMAAASALRLMHAAALTHEHIL--STGN 85 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS------LVACTLAEG-E 144 R ++ +G+ +L GD ++ F + + KS + + S ++ T A G + Sbjct: 86 RARIGHS--FGSNIELLTGDGMVP--FGLELLAKSDDLTQNNSERILRVIIEITQAMGSQ 141 Query: 145 LRQLSLSKNLDVTEEDYL-HVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 L + DY+ HV K K L S A V +++ G + L+ YG+ +G+ Sbjct: 142 GMALGQYNQFQHGQSDYIDHVCKKKEGELHSCAGAVGAILGGGTEEEIEKLRRYGLYVGL 201 Query: 204 AFQLVDDVLDYRGEVN 219 ++ + ++ + EV+ Sbjct: 202 MQGVLSNWVERKEEVS 217 >gi|300431229|gb|ADK12004.1| farnesyl diphosphate synthase [Aralia elata] Length = 342 Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust. Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 34/252 (13%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQ 104 D+ + L+ A IE++ L+ DD++D S RRG+ V ++ N Sbjct: 69 DDEIFLSSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVNDGILLRNH 128 Query: 105 TSVLVGDFLLSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTE 158 ++ + + + + E + Q A + + L+ + E +L + SL Sbjct: 129 IPRILKKHFRQKPYYVDLLDLFNEVEFQTACGQMIDLITTLVGEKDLSKYSLPI------ 182 Query: 159 EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + +++ KTA F + + L++G +K + +G FQ+ DD LD G Sbjct: 183 --HRRIVQYKTAYYSFYLPVACALLMSGGDLEKHTNVKDILIEMGTYFQVQDDYLDCFGA 240 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-DGKISVENLKKAFIIMRE 276 +GK IG D + K + V+ A + + +K F D SV +K+ + ++ Sbjct: 241 PEVIGK-IGTDIEDFKCSWLVVKALELSNEEQKKFLHENYGKDDPASVAKVKELYHTLKL 299 Query: 277 NRALVDTEYRAY 288 + E ++Y Sbjct: 300 QDVFAEYESKSY 311 >gi|182412394|ref|YP_001817460.1| polyprenyl synthetase [Opitutus terrae PB90-1] gi|177839608|gb|ACB73860.1| Polyprenyl synthetase [Opitutus terrae PB90-1] Length = 306 Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust. Identities = 58/232 (25%), Positives = 92/232 (39%), Gaps = 22/232 (9%) Query: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 ++ L GK +R L L A + LACAIEF H A+L+ DD+ +D++ Sbjct: 34 ALRQLASHPGKLVRAQLVLIGAEQHGWSAAAAEQLACAIEFFHVASLVLDDLPCMDNAET 93 Query: 91 RRGKVAARLVWG------------NQTSVLVGDFLLSQAFCMVIETKSQEALEAL--SLV 136 RRG+ G N+ L G+ AF T + A+ L +L Sbjct: 94 RRGQPCVHRRHGDATAILAALALINRAYALAGE-----AFLRAPRTVRRAAVTCLHRALG 148 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 L G+ L+ ++ D + + +KT LF + + +L A R+ L++ Sbjct: 149 HAGLVGGQAWDLAFART-DRSSRTVAKIAAAKTGALFELTVLLPALAAPASGVERRWLRA 207 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + G+ FQ DD+ D GK D +P L + L R Sbjct: 208 LCVYWGLQFQAADDLRDVLLTSVAAGKTTQRDQLMARPNLALALGVPAARHR 259 >gi|119573460|gb|EAW53075.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), isoform CRA_a [Homo sapiens] Length = 248 Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 5/122 (4%) Query: 157 TEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDY 214 TE+ Y ++K KTA F + + +AG+ A K + +G FQ+ DD LD Sbjct: 84 TEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDL 143 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIM 274 G+ + GK IG D ++ K + V+ QR T + K N G+ E + + + Sbjct: 144 FGDPSVTGK-IGTDIQDNKCSWLVVQCLQRATPEQYQILKE--NYGQKEAEKVARVKALY 200 Query: 275 RE 276 E Sbjct: 201 EE 202 >gi|89894766|ref|YP_518253.1| hypothetical protein DSY2020 [Desulfitobacterium hafniense Y51] gi|89334214|dbj|BAE83809.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 288 Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 22/180 (12%) Query: 68 ACAIEFIHTATLLHDDVVD---DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--- 121 A A+E A + DD+ D D R AA+ + N ++++ FL +A + Sbjct: 36 AVAMELYALAADIFDDIEDQDNDELPWRTIPAAQAI--NTANLIL--FLSFKALAAINDQ 91 Query: 122 -IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + ++ + + + + AC G+ ++ +T Y + K+ L + A +++ Sbjct: 92 ALYRQANDIFQTMGITAC---HGQNQEFLYEGQDAITLAQYFDTARKKSGALTAGACKLA 148 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD-YRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++AG S+ L +G NLGI Q+ +D+ D +R E D R GK TLP++ Sbjct: 149 GVLAGCDTSLILDLDKFGQNLGIISQIKNDLQDLFRVEAK-------SDVRLGKKTLPLV 201 >gi|296387400|ref|ZP_06876899.1| geranyltranstransferase [Pseudomonas aeruginosa PAb1] Length = 87 Score = 43.5 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 28/47 (59%) Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 Y +G+AFQ+ DD+LD + +GK G+D + KPT P +L + Sbjct: 2 YAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLE 48 >gi|330903723|gb|EGH34295.1| polyprenyl synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 89 Score = 43.5 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%) Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ Y +G+AFQ+ DD+LD + +GK G D KPT P +L + Sbjct: 1 MQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 50 >gi|322829693|gb|EFZ32996.1| farnesyl pyrophosphate synthase, putative [Trypanosoma cruzi] Length = 362 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 102/263 (38%), Gaps = 43/263 (16%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFS------GGKRLRPMLT-------LATALMLEY 59 ++V +L ++ S E+ P+ +YL GGK R M LA E Sbjct: 12 DEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEA 71 Query: 60 RGDNHVLLACA----IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 + + AC IEF+ L+ DD++D S +RRGK G T + D ++ Sbjct: 72 TKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGVTTQCAINDGIIL 131 Query: 116 QAFCMVI-----------------------ETKSQEALEALSLVACTLAEGELRQLSLSK 152 +++ ++ T + + S+ + E+ Q + Sbjct: 132 KSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAIGQMYDVTSMCDSNKLDPEVAQPMTTD 191 Query: 153 NLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNL-GIAFQLVDD 210 + T Y ++K KT + L + LI+ SV L +L G FQ+ DD Sbjct: 192 FAEFTPAIYKRIVKYKTTFYTYLLPLVMGLLISEAAASVEMNLVERVAHLIGEYFQVQDD 251 Query: 211 VLDYRGEVNEMGKNIGEDFRNGK 233 V+D ++GK +G D + K Sbjct: 252 VMDCFTPPEQLGK-VGTDIEDAK 273 >gi|255587638|ref|XP_002534338.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis] gi|223525465|gb|EEF28044.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis] Length = 333 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 35/232 (15%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQTSVLVGDFL 113 L IE++ L+ DD++D S RRG+ +AA ++ N ++ + Sbjct: 78 LGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILKNHF 137 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 +A+ + + E + Q A + + L+ E +L + +LS LH ++ Sbjct: 138 RGKAYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLS----------LHRRIV 187 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + L+AG +K+ +++GI FQ+ DD LD G+ +GK Sbjct: 188 QYKTAYYSFYLPVACALLMAGENLDDHIDVKNILVDMGIYFQVQDDYLDCFGDPKTIGK- 246 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 IG D + K + V+ A + +K N GK E + K ++ E Sbjct: 247 IGTDIEDFKCSWLVVKALELCNDEQKKVLHE--NYGKADPECVTKVKVLYNE 296 >gi|317140569|gb|ADV03674.1| farnesyl pyrophosphate synthase [Alisma orientale] Length = 343 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 30/245 (12%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQTSVLVGDF 112 +L IE++ L+ DD++D+S RRG+ +AA ++ N ++ Sbjct: 90 VLGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRIPKVGLIAANDGIILRNHIPRMLQRH 149 Query: 113 LLSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166 + + + + E + Q A + L L+ E +L + L Y +++ Sbjct: 150 FKGKPYYVDLLDLFNEVEFQTACGQMLDLITTHEGETDLSKYKLPV--------YKRIVQ 201 Query: 167 SKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA F + + L++G +K+ + +G FQ+ DD LD G+ +GK I Sbjct: 202 YKTAYYSFYLPVACALLMSGENLDQFVDVKNILIEMGTYFQVQDDYLDCFGDPKFIGK-I 260 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKN-FWKSTINDGKISVENLKKAFIIMRENRALVDTE 284 G D + K + V+ A +R ++ EK +++ + V +K + + + D E Sbjct: 261 GTDIEDFKCSWLVVQAMERASESEKKILYENYGKNDPACVAKVKAIYNDLDLQKVFTDYE 320 Query: 285 YRAYS 289 +Y+ Sbjct: 321 NASYT 325 >gi|18478919|gb|AAL73357.1|AF386102_1 farnesyl diphosphate synthase precursor [Trypanosoma cruzi] Length = 425 Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 55/269 (20%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFS------GGKRLRPMLT-------LATALMLEY 59 ++V +L ++ S E+ P+ +YL GGK R M LA E Sbjct: 75 DEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEA 134 Query: 60 RGDNHVLLACA----IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 + + AC IEF+ L+ DD++D S +RRGK G T + D ++ Sbjct: 135 TKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGVTTQCAINDGIIL 194 Query: 116 QAFCMVI-----------------------ETKSQEALEALSLVACTLAEGELRQLSLSK 152 +++ ++ T + + S+ + E+ Q + Sbjct: 195 KSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNKLDPEVAQPMTTD 254 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL--------GIA 204 + T Y ++K KT ++ L L+ G+ V +A S MNL G Sbjct: 255 FAEFTPAIYKRIVKYKT-TFYTYLL---PLVMGLL--VSEAAASVEMNLVERVAHLIGEY 308 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 FQ+ DDV+D ++GK +G D + K Sbjct: 309 FQVQDDVMDCFTPPEQLGK-VGTDIEDAK 336 >gi|294955858|ref|XP_002788715.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC 50983] gi|239904256|gb|EER20511.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC 50983] Length = 365 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 31/219 (14%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAI----EFIHTATLLHDDVVDDSALRRGKVA 96 GGK R + T+AT + L HV A AI EF+ + L+ DDV+D S RRG Sbjct: 93 GGKMTRGLTTVATYVALCGDSCEHVKDAAAIGWSAEFLQASFLMFDDVMDQSETRRGSTC 152 Query: 97 ----ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSK 152 + N + +V F+ + + ++IE+ +A L+++ L + + + Sbjct: 153 WYRLPEISMPNSLNDVV--FIENAVYTLLIESTGFDADIKLAII--RLCHDITLRTIIGQ 208 Query: 153 NLDV---------------TEEDYLHVIKSKTAVL---FSAALEVSSLIAGVQNSVRQAL 194 +LD+ T E Y KTA AL ++ + + + Sbjct: 209 HLDLNSVRPDDYTVDLSRYTMERYWATTAYKTAYYSFWLPVALGMAMARFPLDDPDYKGT 268 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 K + LG FQ DD LD G+ +GK +G D + K Sbjct: 269 KDACILLGNFFQAQDDFLDVFGDPEVIGK-VGTDIKESK 306 >gi|159118517|ref|XP_001709477.1| Farnesyl diphosphate synthase [Giardia lamblia ATCC 50803] gi|157437594|gb|EDO81803.1| Farnesyl diphosphate synthase [Giardia lamblia ATCC 50803] Length = 407 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 65/280 (23%), Positives = 112/280 (40%), Gaps = 66/280 (23%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATAL---------MLEYRGDNHVLLACAI------E 72 + I +V+KY + GGK R L L +LE + L AI E Sbjct: 52 DHIVEVIKYNVV-GGKMTRGTLAADIFLQTVRFLFSGLLEDSNFSEELFNLAIDICLVQE 110 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL--LSQAFCMVIETKSQEAL 130 + A L+ DDV+D S +RRGK + R V G++ +V G L ++ + + +E K + L Sbjct: 111 ILQGAFLMIDDVIDHSTIRRGKPSWRAVVGDEQAVNDGLILWQIADSLVLYLEDKCGKTL 170 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDY-----------LHVIKS------------ 167 + + A +L ++LD + Y +++K+ Sbjct: 171 KIFEVYHQAKA-----NTTLGQHLDTFTKTYSQRHTMGHLNDTYILKTAYYTFYLPLIMG 225 Query: 168 -KTAVLF-------SAALE----------VSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 ++ VLF +AA E + +L + + Q + M+LG +Q+ D Sbjct: 226 YRSGVLFGNMAIGTTAASEKGYTMQKVDSILNLQQRLDTDIEQQIHKISMDLGRLYQMQD 285 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 D LD+ E+ D+ K T P++ A + E Sbjct: 286 DFLDFYAP--EILHKESSDYLENKATWPLVRALELSASEE 323 >gi|1491641|emb|CAA59170.1| dimethylallyltransferase [Capsicum annuum] Length = 342 Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust. Identities = 54/257 (21%), Positives = 113/257 (43%), Gaps = 33/257 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTSVLVGDFL 113 L IE++ L+ DD++D+S RRG+ V ++ N S ++ + Sbjct: 78 LGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWYKVEKVGMIAVNDGILLRNHISRILKNHF 137 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 +++ + + E + Q A + + L+ + E +L + SL + +++ Sbjct: 138 RPKSYYVDLLDLFNEVEFQTASGQMIDLITTHVGEKDLSKYSLPI--------HCRIVQY 189 Query: 168 KTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KTA F + + L+AG +K+ + +GI FQ+ DD LD + +GK IG Sbjct: 190 KTAYYSFYLPVACALLMAGENLDNHVDVKNILIEMGIYFQVQDDYLDCFADPEVLGK-IG 248 Query: 227 EDFRNGKPTLPVILAFQRGTKREKN-FWKSTINDGKISVENLKKAFIIMRENRALVDTEY 285 D ++ K + V+ A + + +K +++ D + +K + ++ ++ E Sbjct: 249 TDIQDFKCSWLVVKALELCNEEQKKILYENYGKDDAACIAKIKTLYNDLKLEEVFLEYEK 308 Query: 286 RAYSYGQKAKDSLRCLP 302 + Y +K +S+ P Sbjct: 309 KTY---EKLANSIAAHP 322 >gi|121308574|dbj|BAF43673.1| geranyltranstransferase [Vibrio fischeri] Length = 106 Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 6/106 (5%) Query: 178 EVSSLIAGVQ-NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 ++ +L AG + ++ L+ Y +G+AFQ+ DD+LD + +GK G D K T Sbjct: 1 QLGALCAGDKGKAILPQLEVYADAIGLAFQVQDDILDIISDTETLGKPQGSDLELDKSTY 60 Query: 237 PVILAFQRGTKREKNFWKSTI---NDGKISVENLK--KAFIIMREN 277 P +L + + + +++ I ND + + ++ ++I R+N Sbjct: 61 PALLGLEGAKHKAEQLYQTAIEALNDIPYNTDAMQAFAQYVIERKN 106 >gi|315024113|gb|ADR83704.1| farnesyl pyrophosphate synthase [Alisma plantago-aquatica] Length = 343 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 30/245 (12%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQTSVLVGDF 112 +L IE++ L+ DD++D+S RRG+ +AA ++ N ++ Sbjct: 90 VLGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRIPKVGLIAANDGIILRNHIPRMLQRH 149 Query: 113 LLSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166 + + + + E + Q A + L L+ E +L + L Y +++ Sbjct: 150 FKGKPYYVDLLDLFNEVEFQTACGQMLDLITTHEGETDLSKYKLPV--------YKRIVQ 201 Query: 167 SKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA F + + L++G +K+ + +G FQ+ DD LD G+ +GK I Sbjct: 202 YKTAYYSFYLPVACALLMSGENLDQFVDVKNILIEMGTYFQVQDDYLDCFGDPKFIGK-I 260 Query: 226 GEDFRNGKPTLPVILAFQRGTKREKN-FWKSTINDGKISVENLKKAFIIMRENRALVDTE 284 G D + K + V+ A +R ++ EK +++ + V +K + + + D E Sbjct: 261 GTDIEDFKCSWLVVQAMERASESEKKILYENYGKNDPACVAKVKAIYNDLDLQKVFTDYE 320 Query: 285 YRAYS 289 +Y+ Sbjct: 321 NASYT 325 >gi|322786902|gb|EFZ13152.1| hypothetical protein SINV_08238 [Solenopsis invicta] Length = 353 Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 21/205 (10%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW--GNQTSVL-VGDFLLSQAFCMVI 122 +LA +E + DD+VD S RRG+ W N T ++ + D L Q+ + Sbjct: 85 ILAWCMEMAIAYIVTLDDIVDQSLFRRGQPC----WYRRNDTGLMAINDGSLVQSTVYYL 140 Query: 123 ETKSQEALEALSLVACTLAEGELRQ-----LSLSK-----NLD-VTEEDYLHVIKSKT-- 169 K E E + + T + + L L+ NLD T E + + K KT Sbjct: 141 IEKHFEGKECYNNLVKTFQQAIFKTQIGQFLDLTSTFKKCNLDQFTMERFNAIAKCKTEH 200 Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 + F L + + +S + LG +Q+ DD LD G++ +GK+ D Sbjct: 201 GIYFLPTLLAMHFAEIKDPEMFKQAESILVQLGYLYQVQDDYLDCFGDLKVLGKD-DTDI 259 Query: 230 RNGKPTLPVILAFQRGTKREKNFWK 254 + GK T + A QR T ++N K Sbjct: 260 KEGKCTWLFVKALQRVTPEQRNILK 284 >gi|300122152|emb|CBK22726.2| unnamed protein product [Blastocystis hominis] Length = 349 Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust. Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 29/270 (10%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFS--GGKRLRPMLTLATALML----- 57 +D+ L+D+E++ + I E+ D++K + ++ GGK +R + + +A + Sbjct: 14 KDVLLRDVEEI---LDSTIIVPHELKQDIIKMIEYNCVGGKMIRGLFAVYSAYAMCNEWN 70 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA----RLVWGNQTSVLVGDFL 113 E + E + A L+ DD++D++ +RRGK A R+ + + L Sbjct: 71 EEMKKRAFVAGWGAEMLQGAFLIADDIMDEAEMRRGKPAWYRIDRIGMMSVNDTFILQSL 130 Query: 114 LSQAFCMVIETKS-----QEALEALSLV---ACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 + + VI + S Q+ E + V L + + S N +DY I Sbjct: 131 IYKLLERVISSVSLFYSVQKVFEDIKFVTELGQMLDLNTINHKTHSINYQYFTKDYYEQI 190 Query: 166 KSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN-----LGIAFQLVDDVLDYRGEVNE 220 + ++ L V L + S ++ + S + LG FQ+ DD LD + + Sbjct: 191 ITNKTAYYTIFLPV-YLGLVLTESPKETMHSPQLRELCILLGRYFQIRDDFLDAFADPSV 249 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +GK G D + GK + ++ F ++ ++ Sbjct: 250 LGKE-GTDIQEGKCSWVILTVFSLCSEEDR 278 >gi|240277524|gb|EER41032.1| farnesyl pyrophosphate synthetase [Ajellomyces capsulatus H143] gi|325093604|gb|EGC46914.1| farnesyl pyrophosphate synthetase [Ajellomyces capsulatus H88] Length = 347 Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 30/235 (12%) Query: 40 SGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R + T L L + + N L EF+ L+ DD++D S RRG Sbjct: 47 PGGKLNRGLSVPDTGLALLEKPLNDEQFKNLCTLGWMTEFLQAFFLVSDDIMDSSVTRRG 106 Query: 94 KVAARLVWGNQTSV---LVGDFLLSQAFCMVIETKSQEALEA----LSLVACTLAEGELR 146 + W + +V + D + ++ V+ K + A L L + EL Sbjct: 107 EPC----WYRRPNVGMIAINDAFMLESVIYVLLKKHFRSHPAYVDFLELFHEVTFQTELG 162 Query: 147 QL-----SLSKNLDV---TEEDYLHVIKSKTA---VLFSAALEVSSLIAGVQNSVRQALK 195 QL + N+D+ + + + ++ KTA AL + L +++RQA Sbjct: 163 QLCDLLTAPEDNVDLDNFSMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPSNLRQA-H 221 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + LG FQ DD LD G+ ++GK IG D ++ K + + A +R + ++ Sbjct: 222 DILIPLGQYFQAQDDYLDVFGKPEQIGK-IGTDIQDNKCSWVINQALKRCSAEQR 275 >gi|256084091|ref|XP_002578266.1| dimethylallyltransferase; farnesyl pyrophosphate synthase; geranyltranstransferase [Schistosoma mansoni] gi|238663632|emb|CAZ34504.1| dimethylallyltransferase [Schistosoma mansoni] Length = 401 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 57/257 (22%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNH-------VLLACAIEFIHTATLLHDDVVDDSALRR 92 S GKR+R +L + + ++ + +N L+ +E +H L+ DD++D+S LRR Sbjct: 52 SSGKRIRGVLVVLSYMVFSNKNENSRKNLSCVYLIGWCVELLHAGFLVLDDIIDNSTLRR 111 Query: 93 GKVAARLVWGNQTSVLVG-----------DFLLSQAF----------------------C 119 G+ + L+G +L+ F C Sbjct: 112 GQPCWHCTQIDSNRGLIGVNDGLHLILSSKYLIHSLFAENQSDVDSYSWKDKNNVYLKLC 171 Query: 120 MVIE-----TKSQEALEALSLVA---CTL--AEGELRQLSLSKNLDVTEEDYLHVIKSKT 169 + + T S + L+ LS C L + L S ++N D I Sbjct: 172 KLFDEISYKTCSGQCLDVLSSNPNNQCILDRKQNNLEFDSFTRNY---SPDVFEAITHWK 228 Query: 170 AVLFSAALEVSS--LIAGVQ-NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 ++ L V+ ++A V + + ++++ + LG FQ DD LD G+ GK +G Sbjct: 229 TGFYTFYLPVACGMILAEVDTDDIFKSVQHILLKLGNYFQAQDDYLDCFGDSEITGK-VG 287 Query: 227 EDFRNGKPTLPVILAFQ 243 D GK T ++ A + Sbjct: 288 TDIAEGKCTWLIVEALK 304 >gi|302506172|ref|XP_003015043.1| hypothetical protein ARB_06803 [Arthroderma benhamiae CBS 112371] gi|291178614|gb|EFE34403.1| hypothetical protein ARB_06803 [Arthroderma benhamiae CBS 112371] Length = 347 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 22/231 (9%) Query: 40 SGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R + TAL L E + + LL E + L+ DD++D S RRG Sbjct: 47 PGGKLNRGLSVPDTALALLEKPLTEEQFKHLGLLGWMTELLQAFFLVSDDIMDSSITRRG 106 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEA-LEALSLVACTLAEGELRQL-- 148 + G + F+L + ++++ +S A ++ + L + EL QL Sbjct: 107 EPCWYRRPGVGMIAINDAFMLESSIYVLLKKHFRSHPAYIDLVELFHEITFQTELGQLCD 166 Query: 149 ---SLSKNLDVTE---EDYLHVIKSKTA---VLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + N+D+ + + ++ KTA AL + L ++RQA + Sbjct: 167 LITAPEDNVDLNNFNMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPKNLRQA-HDILI 225 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LG FQ DD LD G+ ++GK IG D ++ K + V A +R T ++ Sbjct: 226 PLGQYFQAQDDYLDVFGKPEQIGK-IGTDIQDNKCSWVVNQALKRCTPAQR 275 >gi|148700812|gb|EDL32759.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Mus musculus] Length = 153 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 1/136 (0%) Query: 35 KYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 +YL+ GK++R L+ A L+ D ++ E +H A+LL DD+ D S LRRG Sbjct: 17 RYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSSKLRRGF 76 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNL 154 A ++G + + +++ V+ +A++ + L +G+ + Sbjct: 77 PVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDTY 136 Query: 155 DV-TEEDYLHVIKSKT 169 TEE+Y ++ KT Sbjct: 137 TCPTEEEYKAMVLQKT 152 >gi|315049457|ref|XP_003174103.1| farnesyl pyrophosphate synthetase [Arthroderma gypseum CBS 118893] gi|311342070|gb|EFR01273.1| farnesyl pyrophosphate synthetase [Arthroderma gypseum CBS 118893] Length = 347 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 22/225 (9%) Query: 40 SGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R + TAL L E + + LL E + L+ DD++D S RRG Sbjct: 47 PGGKLNRGLSVPDTALALLEKPLSEEQFKHLGLLGWMTELLQAFFLVSDDIMDSSITRRG 106 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEA-LEALSLVACTLAEGELRQL-- 148 + G + F+L + ++++ +S A ++ + L T + EL QL Sbjct: 107 EPCWYRRQGVGMIAINDAFMLESSIYVLLKKHFRSHPAYIDLVELFHETTFQTELGQLCD 166 Query: 149 ---SLSKNLDV---TEEDYLHVIKSKTA---VLFSAALEVSSLIAGVQNSVRQALKSYGM 199 + N+D+ + + + ++ KTA AL + L ++RQA + Sbjct: 167 LITAPEDNVDLDNFSMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPKNLRQA-HDILI 225 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 LG FQ DD LD G+ ++GK IG D ++ K + V A +R Sbjct: 226 PLGQYFQAQDDYLDVFGKPEQIGK-IGTDIQDNKCSWVVNQALRR 269 >gi|316969473|gb|EFV53567.1| polyprenyl synthetase superfamily [Trichinella spiralis] Length = 683 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 23/214 (10%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYL-IFSGGKRLRPMLTLATALMLEYRGDNHVLLA- 68 +M + L+R ++ +++ +V L +GGK +R L L AL D+ LA Sbjct: 471 EMNQPLLTALRRFTNNQQLLANVANLLEQTAGGKGIRGRL-LTGALEANVLFDDRTSLAQ 529 Query: 69 ------CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL-VGDFLLSQAFC-- 119 A+E +H L+ DD++D+++ RRGK W Q + + D +L Q+ Sbjct: 530 KAHTIASAVEMLHAGFLIQDDIMDNASTRRGKP----CWYRQVGLSGINDGVLLQSAASW 585 Query: 120 ---MVIETKSQEALEALSLVACTLAEGELRQLSLSK-NLDVTEED-YLHVIKSKTAVL-F 173 +V++ Q+ S V T+ ++L + K D D Y ++ +KTA F Sbjct: 586 LPSVVLDDHPQKHAIVSSFVEATVITSLGQKLDMEKARPDTCSWDRYRELVTNKTAHYSF 645 Query: 174 SAALEVSSLIAGVQ-NSVRQALKSYGMNLGIAFQ 206 L+V L+A +Q V LK+ G FQ Sbjct: 646 WFPLKVGLLLADIQLEEVEIELKNICYEFGFYFQ 679 >gi|22676905|gb|AAM98379.1| farnesyl diphosphate synthase [Hevea brasiliensis] gi|34013692|gb|AAQ56011.1| farnesyl diphosphate synthase [Hevea brasiliensis] Length = 342 Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 36/247 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQTSVLVGDFL 113 L IE++ L+ DD++D S RRG+ +AA ++ N ++ Sbjct: 78 LGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRVPKVGLIAANDGILLRNHIPRILKKHF 137 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 +A+ + + E + Q A + + L+ E +L + +LS LH ++ Sbjct: 138 RGKAYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLS----------LHRRIV 187 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + LIAG +K + +GI FQ+ DD LD G+ +GK Sbjct: 188 QYKTAYYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLDCFGDPETIGK- 246 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL-VDT 283 IG D + K + V+ A + + +K + GK ++ K ++ E + V T Sbjct: 247 IGTDIEDFKCSWLVVKALELCNEEQKKVLYE--HYGKADPASVAKVKVLYNELKLQGVFT 304 Query: 284 EYRAYSY 290 EY SY Sbjct: 305 EYENESY 311 >gi|17481248|dbj|BAB79206.1| farnesyl diphosphate synthase [Rhodovulum sp. CP-10] Length = 144 Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 13/134 (9%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA-LSLVACTLAEGELRQL 148 LRRG+ + W + T++LVGD L + AF ++ + + LVA + + Sbjct: 12 LRRGQPTVHVKWDDGTALLVGDALQTLAFDLLADPACHPDPGVRIDLVASLARASGIDGM 71 Query: 149 SLSKNLDVTEE---------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 L + D+ E + + +KT L + E + + + L SY Sbjct: 72 VLGQAQDIAAETAGRPLTLAEITELQANKTGALIRWSAEAGARLGRADIA---PLSSYAT 128 Query: 200 NLGIAFQLVDDVLD 213 LG+AFQ+ DD+LD Sbjct: 129 ALGLAFQIADDILD 142 >gi|71409298|ref|XP_807002.1| farnesyl pyrophosphate synthase [Trypanosoma cruzi strain CL Brener] gi|70870903|gb|EAN85151.1| farnesyl pyrophosphate synthase, putative [Trypanosoma cruzi] Length = 425 Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 55/269 (20%) Query: 13 EKVNFLILKRICSDVEMIPDVVKYLIFS------GGKRLRPMLT-------LATALMLEY 59 ++V +L ++ S E+ P+ +YL GGK R M LA E Sbjct: 75 DEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEA 134 Query: 60 RGDNHVLLACA----IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 + + AC IEF+ L+ DD++D S +RRGK G T + D ++ Sbjct: 135 TKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGVTTQCAINDGIIL 194 Query: 116 QAFCMVI-----------------------ETKSQEALEALSLVACTLAEGELRQLSLSK 152 +++ ++ T + + S+ + E+ Q + Sbjct: 195 KSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAIGQMYDVTSMCDSNKLDPEVAQPMTTD 254 Query: 153 NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL--------GIA 204 + T Y ++K KT ++ L L+ G+ V +A S MNL G Sbjct: 255 FAEFTPAIYKRIVKYKT-TFYTYLL---PLVMGLL--VSEAAASVEMNLVERVAHLIGEY 308 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 FQ+ DDV+D ++GK +G D + K Sbjct: 309 FQVQDDVMDCFTPPEQLGK-VGTDIEDAK 336 >gi|121719090|ref|XP_001276285.1| farnesyl-pyrophosphate synthetase [Aspergillus clavatus NRRL 1] gi|119404483|gb|EAW14859.1| farnesyl-pyrophosphate synthetase [Aspergillus clavatus NRRL 1] Length = 347 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-- 124 L E + L+ DD++D S RRG+ G + F+L +++ Sbjct: 80 LGWLTELLQAFFLVSDDIMDSSITRRGQPCWYRYPGVGLIAINDSFMLESGIYHILKKHF 139 Query: 125 KSQEA-LEALSLVACTLAEGELRQL-----SLSKNLDV---TEEDYLHVIKSKTAVLFSA 175 +S A ++ + L T + EL QL + +D+ + E Y+ ++ KTA +S Sbjct: 140 RSHPAYVDFIELFHETTWQTELGQLCDLITAPEDKVDLDNFSMEKYMFIVTYKTAY-YSF 198 Query: 176 ALEVSSLIAGVQNSVRQALKSYG---MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 L V+ + ++ + + LK + LG FQ+ DD LD G+ +GK IG D ++ Sbjct: 199 YLPVALALLYLELATPETLKQTHDILIPLGQYFQVQDDYLDAYGDPAVIGK-IGTDIQDN 257 Query: 233 KPTLPVILAFQRGTKREKN 251 K + + A QR + ++ Sbjct: 258 KCSWLINQALQRCSADQRQ 276 >gi|156082379|ref|XP_001608674.1| farnesyl pyrophosphate synthetase [Babesia bovis T2Bo] gi|154795923|gb|EDO05106.1| farnesyl pyrophosphate synthetase , putative [Babesia bovis] Length = 336 Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 25/258 (9%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALML------EYRGDNHVLLACA--IEFIHTA 77 D+ ++Y + GGK +R L +AT + EY+ ++L +E + TA Sbjct: 44 DIAYYSHAIQYNL-QGGKLIRGTLVVATTRCILGDNISEYQWKLALILGMGWCVELLQTA 102 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA 137 L+ DD++D S +RR + L W D L+S I T+ + ++++ Sbjct: 103 FLVADDIMDKSVMRR----SNLCWIIANQFKGNDRLIS---IFNIFTR----ISMVTILG 151 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGV--QNSVRQAL 194 + +SL N Y + K+KTA F + + I+ + N + L Sbjct: 152 QHMDTYNTMDISLLDNPTAATALYYRICKNKTAYYTFFLPISLGMFISEIDEHNINYRKL 211 Query: 195 KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 +S LG FQ DD LD + + GK+ G D + K T + A K ++ K Sbjct: 212 ESVSSLLGHLFQAQDDYLDCYSDPSFSGKD-GTDIQTRKCTWLLATALHICNKSQRQRLK 270 Query: 255 STIN-DGKISVENLKKAF 271 I D SV +K + Sbjct: 271 ENIGIDDPHSVSVVKGIY 288 >gi|68165941|gb|AAY87903.1| farnesyl diphosphate synthase [Panax ginseng] Length = 342 Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust. Identities = 54/253 (21%), Positives = 105/253 (41%), Gaps = 34/253 (13%) Query: 61 GDNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGN 103 D+ + L+ A IE++ L+ DD++D S RRG+ V ++ N Sbjct: 68 SDDEIFLSSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVNDGILLRN 127 Query: 104 QTSVLVGDFLLSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVT 157 ++ + + + + E + Q A + + L+ + E +L + SL Sbjct: 128 HIPRILKKHFRQKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLPI----- 182 Query: 158 EEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + +++ KTA F + + L++G +K + +G FQ+ DD LD G Sbjct: 183 ---HRRIVQYKTAYYSFYLPVACALLMSGEDLEKHTNVKDILIEMGTYFQVQDDYLDCFG 239 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-DGKISVENLKKAFIIMR 275 +GK IG D + K + V+ A + + +K F D SV +K+ + ++ Sbjct: 240 APEVIGK-IGTDIEDFKCSWLVVKALELSNEEQKKFLHENYGKDDPASVAKVKELYNTLK 298 Query: 276 ENRALVDTEYRAY 288 + E ++Y Sbjct: 299 LQDVFAEYESKSY 311 >gi|238492197|ref|XP_002377335.1| geranylgeranyl diphosphate synthase, putative [Aspergillus flavus NRRL3357] gi|220695829|gb|EED52171.1| geranylgeranyl diphosphate synthase, putative [Aspergillus flavus NRRL3357] Length = 444 Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 15/173 (8%) Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVA 137 DD+ DDS+ RRG AA +++G +V + ++AF + E K+ ++AL + Sbjct: 190 DDIQDDSSKRRGMPAAHVMYGVGQTVNCVSYTGAKAFFLCEELKNANACRKALYGQYMPL 249 Query: 138 CTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ EL L + L++ + DY+ +I +KTA F L + + A V Sbjct: 250 TVISIDELDNLFSGQALELHWKFHRTCPSMNDYIIMIDNKTAGFFRLVLRMMAAEASVSM 309 Query: 189 SV--RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+ + L + LG +Q+ DD + + K +D GK +L +I Sbjct: 310 SLEKKNTLLHFITLLGRYYQIRDDYQNLVSDEYAAKKGFCDDLSEGKFSLILI 362 >gi|145606763|ref|XP_364478.2| hypothetical protein MGG_09448 [Magnaporthe oryzae 70-15] gi|145014422|gb|EDJ98990.1| hypothetical protein MGG_09448 [Magnaporthe oryzae 70-15] Length = 339 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IH +L+ DD+ D SALRR A V+G ++ + A ++T + Sbjct: 114 IHNTSLMLDDIQDSSALRRSSPATHTVFGTPQTI-------NSAVYFTVDTIQR------ 160 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV--QNSVR 191 A T EL Q +TE YL +I KT LF L V+ L+ ++ + Sbjct: 161 ---ASTSGNPELMQA-------LTE--YLQMIDGKTGALF---LMVTRLMGAFLPASAPK 205 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 L + LG FQ+ DD ++ + D GK + ++ A +N Sbjct: 206 SPLDRLMLLLGRYFQIRDDYVNLVSTQYSDSRGFCTDLDEGKCSFMIVHAMSHAQPSARN 265 Query: 252 FWKSTI 257 ++ + Sbjct: 266 ILRNVL 271 >gi|81157935|dbj|BAE48218.1| subunit 2 of solanesyl diphosphate synthase [Mus musculus] Length = 401 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 33/271 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ S L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 149 LAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 208 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY-LHVIKSKT--------AVLFSAA 176 + + +E LS L G ++ S S + +D + K +T A AA Sbjct: 209 NTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGISTWKEQTFLSHCALLAKSCQAA 268 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +E++ A VQ+ Q YG ++ ++ ++ D+ + + K + + Sbjct: 269 MELAKHDAAVQDMAFQ----YGKHMAMSHKINADLQPFIKDKASDSKTFNLN------SA 318 Query: 237 PVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVD-TEYRAYSYG 291 PV+L Q R+ W I + G ++ L++ + + +D Y +G Sbjct: 319 PVVL-HQEFLGRD--LWIKQIGEAQEKGSLNYSKLRETIKAGKGVTSAIDLCRY----HG 371 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 372 NKALEALESFPPSEARSALENIV-FAVTRFS 401 >gi|284022477|gb|ADB65787.1| prenyl transferase [Metarhizium anisopliae] gi|322695229|gb|EFY87041.1| prenyl transferase [Metarhizium acridum CQMa 102] Length = 341 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 52/236 (22%), Positives = 97/236 (41%), Gaps = 26/236 (11%) Query: 41 GGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLV 100 G P + + + + + L+ ++ +H +L DD+ DDS R+ + A ++ Sbjct: 74 GRHHFAPFVKAFSPTLKNDDPEKYALILDIMDAVHFCLILVDDICDDSTKRKNQTTAHMI 133 Query: 101 WGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLS------KNL 154 +G+ + F+L++ + + +E L + L E + LSL K Sbjct: 134 YGSCETANRAYFVLTKMINRAMRERPVLGVELLKALEQML---EGQDLSLVWRRDGLKAF 190 Query: 155 DVTEED----YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDD 210 +EE+ Y ++ + KT LF L+ + N L G QL +D Sbjct: 191 GFSEEERVPMYKNMAQLKTGTLF-------VLLGRLLNDGGDQLDDLFTRFGWYAQLQND 243 Query: 211 VLD-YRGEVNEMGKNIGEDFRNGKPTLPVILAF---QRGTKREKNFWKSTINDGKI 262 + Y E + ED RNG+ + P+++A ++ EK F + N+G I Sbjct: 244 CKNIYSDEYAINKGGVAEDLRNGELSFPIVIALNDKHTQSRIEKAF--QSRNEGDI 297 >gi|219669206|ref|YP_002459641.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] gi|219539466|gb|ACL21205.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] Length = 326 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 22/180 (12%) Query: 68 ACAIEFIHTATLLHDDVVD---DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--- 121 A A+E A + DD+ D D R AA+ + N ++++ FL +A + Sbjct: 74 AVAMELYALAADIFDDIEDQDNDELPWRTIPAAQAI--NTANLIL--FLSFKALAAINDQ 129 Query: 122 -IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + ++ + + + + AC G+ ++ +T Y + K+ L + +++ Sbjct: 130 ALYRQANDIFQTMGITAC---HGQNQEFLYEGQDAITLAQYFDTARKKSGALTAGTCKLA 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD-YRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++AG S+ L+ +G NLGI Q+ +D+ D +R E D R GK TLP++ Sbjct: 187 AVLAGCDTSLILDLEKFGQNLGIISQIKNDLRDLFRVEAK-------SDVRLGKKTLPLV 239 >gi|269973903|ref|NP_082048.2| decaprenyl-diphosphate synthase subunit 2 isoform 1 [Mus musculus] gi|85718630|sp|Q33DR3|DLP1_MOUSE RecName: Full=Decaprenyl-diphosphate synthase subunit 2; AltName: Full=All-trans-decaprenyl-diphosphate synthase subunit 2; AltName: Full=Decaprenyl pyrophosphate synthase subunit 2; AltName: Full=Solanesyl-diphosphate synthase subunit 2 gi|187955412|gb|AAI47694.1| Prenyl (solanesyl) diphosphate synthase, subunit 2 [Mus musculus] gi|187955734|gb|AAI47695.1| Prenyl (solanesyl) diphosphate synthase, subunit 2 [Mus musculus] Length = 401 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 33/271 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ S L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 149 LAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 208 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY-LHVIKSKT--------AVLFSAA 176 + + +E LS L G ++ S S + +D + K +T A AA Sbjct: 209 NTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGISTWKEQTFLSHCALLAKSCQAA 268 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +E++ A VQ+ Q YG ++ ++ ++ D+ + + K + + Sbjct: 269 MELAKHDAAVQDMAFQ----YGKHMAMSHKINADLQPFIKDKASDSKTFNLN------SA 318 Query: 237 PVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVD-TEYRAYSYG 291 PV+L Q R+ W I + G ++ L++ + + +D Y +G Sbjct: 319 PVVL-HQEFLGRD--LWIKQIGEAQEKGSLNYSKLRETIKAGKGVTSAIDLCRY----HG 371 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 372 NKALEALESFPPSEARSALENIV-FAVTRFS 401 >gi|90903996|gb|ABE02389.1| hypothetical protein [Siniperca chuatsi] Length = 384 Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 41/269 (15%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVA----ARLVWGNQTSVLVGDFLLSQAFCMVI 122 LA E IHTA L+H +V+ L+ V+ + +GN+ +VL GDFLL+ A + Sbjct: 132 LAEITELIHTAFLVHRGIVN---LKEWTVSDGPLKDMQFGNKMAVLSGDFLLANACTGLA 188 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH-----VIKSKTAVLFSAAL 177 + + + +E +S A G+L Q +N TEE+ L + A L AL Sbjct: 189 QLNNTKVVELIS-----SAIGDLVQGIYCENSSSTEENGLTDGVDVATWEEQAFLSHGAL 243 Query: 178 EVSSLIAGVQ------NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 S A ++ S R A K YG +L + +L D+ + + ++GE Sbjct: 244 LAKSCQAAMELAKHDKESQRLAYK-YGKHLSLGHKLNSDLQPF------VKSSVGEPVSF 296 Query: 232 GKPTLPVILAFQR---GTKREKNFWKSTINDGKISVENL--KKAFIIMRENRALVDTEYR 286 PV+ F R G +R W + + K L K ++ + + Sbjct: 297 SLSAAPVV--FHRQIVGQER----WHQQLQEVKTLRNQLDYSKLLAAVKSEKGVSSAVDL 350 Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVD 315 +G KA ++++ P S + +L + Sbjct: 351 CCYHGNKALEAIQAFPSSEARSALENIAS 379 >gi|118486658|gb|ABK95166.1| unknown [Populus trichocarpa] Length = 342 Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust. Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 36/247 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQTSVLVGDFL 113 L IE++ L+ DD++D S RRG+ +AA ++ N ++ + Sbjct: 78 LGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGLIAANDGILLRNHIPRILKNHF 137 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 +A+ + + E + Q A + + L+ E +L + +LS LH ++ Sbjct: 138 RDKAYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLS----------LHRRIV 187 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + L+AG +K+ + +G FQ+ DD LD G +GK Sbjct: 188 QYKTAYYSFYLPVACALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFGAPETIGK- 246 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDT 283 IG D + K + V+ A + + +K N GK N+ K + E N V Sbjct: 247 IGTDIEDFKCSWLVVKALEICNEEQKKLLHE--NYGKADPANVAKVKALYHELNLQGVFA 304 Query: 284 EYRAYSY 290 +Y + SY Sbjct: 305 DYESKSY 311 >gi|125527405|gb|EAY75519.1| hypothetical protein OsI_03423 [Oryza sativa Indica Group] Length = 392 Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust. Identities = 67/285 (23%), Positives = 119/285 (41%), Gaps = 41/285 (14%) Query: 41 GGKRLRPMLTLATALML---EYRGDNHVLLACA----IEFIHTATLLHDDVVDDSALRRG 93 GGK R + + + ML + LAC IE++ L+ DD++D+S RRG Sbjct: 95 GGKCNRGISVIDSFKMLKGTDVLNKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRG 154 Query: 94 K-------------VAARLVWGNQTSVLVGDFLLSQAFCM-------VIETKSQEALEAL 133 + V ++ N S ++ + + + +E K+ + L Sbjct: 155 QPCWFRVPQVGLIAVNDGIILRNHISRILQRHFKGKPYYVDLIDLFNEVEFKTASG-QLL 213 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQ 192 L+ E +L + +L+ + +++ KTA F + + L++G Sbjct: 214 DLITTHEGEKDLAKYNLTV--------HRRIVQYKTAYYSFYLPVACALLLSGENLDNFG 265 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 +K+ + +G FQ+ DD LD G+ +GK IG D + K + V+ A +R + +K+ Sbjct: 266 DVKNILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADENQKHI 324 Query: 253 WKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSYGQKAKD 296 N GK E + K + +E N V EY SY + D Sbjct: 325 LFE--NYGKPDPECVAKVKDLYKELNLEAVFHEYERESYNKLIAD 367 >gi|34499413|ref|NP_903628.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC 12472] gi|34332897|gb|AAQ61620.2| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC 12472] Length = 379 Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust. Identities = 55/257 (21%), Positives = 90/257 (35%), Gaps = 42/257 (16%) Query: 42 GKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD-------------- 87 GKR+ + L D + +A A++ H TL+HDD+ D+ Sbjct: 50 GKRMHGIAAALAHLACGGGEDAILPVAAAMQLYHHHTLVHDDIYDEDAARRGWPTVHQAF 109 Query: 88 --------------------SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A+RRG + A +G L G LL F Sbjct: 110 AGWFADRRGSEEGVGRVFSGGAMRRGAITA-FAYGKICRALAGRLLLESGFDQAAVLDVA 168 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ALE +L+ + + + + L KT LF + +AG + Sbjct: 169 RALERHEFFDNA---AQLKDVFHEGDEMPSPQACLDNAWLKTGRLFELCAYAGARLAGAE 225 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE-MGKNIGEDFRNGKPTLPVILAFQRGT 246 +AL+ + +A+QL DD+ D + G+ + D + KPT LA Sbjct: 226 AGRTKALERWAGQSALAYQLQDDLEDLNAASEKGQGRGVATDLLHCKPTYLYALAKTMAE 285 Query: 247 KREKN---FWKSTINDG 260 R+++ W+S G Sbjct: 286 GRDRDALLAWQSGAQAG 302 >gi|322491828|emb|CBZ27101.1| putative farnesyl pyrophosphate synthase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 362 Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 26/188 (13%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIE----- 123 IE + L+ DD++D S RRGK L G T V + D LL+ A M + Sbjct: 87 IEMLQAHFLVEDDIMDHSKTRRGKPCWYLHPGVTTQVAINDGLILLAWATQMALHYFADR 146 Query: 124 ----------------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 T + + S+V + + + + ++ T ++ ++ Sbjct: 147 PFLAEVLRIFHDVDLTTTIGQLYDVTSMVDSAKLDANVAHANTTDYVEYTPFNHRRIVVY 206 Query: 168 KTAVL-FSAALEVSSLIAGVQNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA + L + L++G V + A M +G FQ+ DDV+D ++GK I Sbjct: 207 KTAYYTYWLPLVMGLLVSGTMEKVDKGATHKVAMVMGEYFQVQDDVMDCFTPPEKLGK-I 265 Query: 226 GEDFRNGK 233 G D + K Sbjct: 266 GTDIEDAK 273 >gi|326498241|dbj|BAJ98548.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 159 Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIND 259 ++G+ FQ+VDD+LD E+GK G+D + K T P +L G ++ + F + ++D Sbjct: 76 SIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLL----GLEKSREFAEKLLSD 131 Query: 260 GK 261 K Sbjct: 132 AK 133 >gi|295401745|ref|ZP_06811711.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|294976232|gb|EFG51844.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93] Length = 310 Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 29/258 (11%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A A+E + A + DD++D +L A L ++ G L Q + Sbjct: 70 IAAAVELLMLAGDILDDLMDQDSLETSWSKAPLTTSFHMAI--GLLLAGQKAIADLPIDD 127 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVT-----EEDYLHVIKSKTAVLFSAALEVSS 181 + +A S + L L+ L+ +++DVT E DYL ++K K+ L + A V + Sbjct: 128 DKKAKAQSYILSRL----LQSLN-GQHMDVTNGIQTETDYLQMLKKKSGSLVAMACFVGT 182 Query: 182 LIAGVQ-NSVRQALKSYGMNLGIAFQLVDDVLD-YRGEVNEMGKNIGEDFRNGKPTLPVI 239 +AG + N+V ++ Y ++GIA Q+ +D+ YR + KN D + K +LPV+ Sbjct: 183 ALAGAEKNTV--IIEKYANDIGIAAQIDNDIDALYRWD----EKN---DIKAKKKSLPVL 233 Query: 240 LAFQRGTKRE---KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 + +KR+ K ++ + I+ ++ + +K M + A + ++ Y +KA Sbjct: 234 --YMLASKRDNLLKQYFSNHIDYNELYAQK-EKVIQQMEQEGAFYYAKVMSHIYKEKALQ 290 Query: 297 SLRCLPDSSWKKSLMEVV 314 + L KS+++ + Sbjct: 291 EIEKLDVDDRYKSVLKTI 308 >gi|78191061|gb|ABB29855.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana sanderae] Length = 234 Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust. Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 29/204 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVA--------------ARLVWGNQTSVLVGDF 112 L IE++ L+ DDV+D+S RRG+ L+ + T +L F Sbjct: 5 LGWCIEWLQAYFLVLDDVMDNSHTRRGQPCWYKLPKVGMIAVNDGILLRNHITRILKNHF 64 Query: 113 LLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 + +++ ++ + S L+ + E +L + SL + +++ Sbjct: 65 RAKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLPT--------HRRIVQY 116 Query: 168 KTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KTA F + + L+AG +K+ + +GI FQ+ DD LD + +GK IG Sbjct: 117 KTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFADPEVLGK-IG 175 Query: 227 EDFRNGKPTLPVILAFQRGTKREK 250 D ++ K + V+ A + + +K Sbjct: 176 TDIQDFKCSWLVVKALEVCNEEQK 199 >gi|6681694|dbj|BAA88844.1| Farnesyl pyrophosphate synthase [Gentiana lutea] gi|193795398|gb|ACF21779.1| farnesyl pyrophosphate synthase [Gentiana lutea] Length = 349 Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 15/197 (7%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAA-RLVWGNQTSVLVGDFLLSQAFCMVIETK 125 L IE++ L+ DD++D S RR + RL +V G LL +++ Sbjct: 85 LGWCIEWLQAYFLVLDDIMDGSHTRRSQPCWFRLPKVGMIAVNDG-VLLRNHIPRILKKH 143 Query: 126 SQEA------LEALSLVACTLAEGELRQL--SLSKNLDVTEEDY-LH--VIKSKTAVL-F 173 +E L+ + V A G++ L +L D+++ LH +++ KTA F Sbjct: 144 FREKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYSLSLHRRIVQYKTAYYSF 203 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + + L+AG +K+ +++GI FQ+ DD LD GE ++GK IG D + K Sbjct: 204 YLPVACALLMAGENLDNYVDVKNVLIDMGIYFQVQDDYLDCFGEPEKIGK-IGTDIEDFK 262 Query: 234 PTLPVILAFQRGTKREK 250 + V+ A ++ + +K Sbjct: 263 CSWLVVKALEKCNEEQK 279 >gi|291396719|ref|XP_002714927.1| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 2-like [Oryctolagus cuniculus] Length = 405 Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust. Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 27/268 (10%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ S L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 153 LAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 212 Query: 126 SQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKT----AVLFSAALEVS 180 + + +E L+ L +G + S S K +TE+ + K +T L + + + + Sbjct: 213 NTKVVELLASALMDLVQGVYHENSTSTKENCITEDIGISAWKEQTFLSHGALLAKSCQAA 272 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE--VNEMGKNIGEDFRNGKPTLPV 238 +A V++ YG ++ ++ ++ D+ + E + M N+ + PV Sbjct: 273 MELAKHGTEVQEKAFQYGKHMALSHKINSDLQPFIKEKSSDSMAFNLN--------SAPV 324 Query: 239 ILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 +L Q R+ W + + G+++ L++ + + +D +G +A Sbjct: 325 VL-HQEFLGRD--LWMKQLGEAQEKGRLNYTKLRETIKAGKGVTSAIDL---CRYHGNQA 378 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +L P S + +L +V F + R + Sbjct: 379 LAALESFPPSEARSALENIV-FAVTRFS 405 >gi|115465209|ref|NP_001056204.1| Os05g0543400 [Oryza sativa Japonica Group] gi|52353430|gb|AAU43998.1| putative farnesyl pyrophosphate synthase [Oryza sativa Japonica Group] gi|113579755|dbj|BAF18118.1| Os05g0543400 [Oryza sativa Japonica Group] gi|215707197|dbj|BAG93657.1| unnamed protein product [Oryza sativa Japonica Group] gi|215712400|dbj|BAG94527.1| unnamed protein product [Oryza sativa Japonica Group] gi|222632427|gb|EEE64559.1| hypothetical protein OsJ_19411 [Oryza sativa Japonica Group] Length = 355 Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 15/198 (7%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL-----SQAFCMV 121 L +E++ L+ DD++DDS RRG+ V S+ + D ++ ++ + Sbjct: 91 LGWCVEWLQAYFLVLDDIMDDSHTRRGQPCWFRV-PQVGSIAINDGIILRNHITRMLRLH 149 Query: 122 IETKSQEA--LEALSLVACTLAEGELRQLSLSKNLDVTEEDY---LH--VIKSKTAVL-F 173 K A L+ + V A G+L L + + Y +H +++ KT+ F Sbjct: 150 FRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNKYNIGVHRRIVQYKTSYYSF 209 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + + L++G + A++ + +GI FQ+ DD LD G+ +GK IG D + K Sbjct: 210 YLPVACALLLSGEDLTKYGAVEDILVKMGIYFQVQDDYLDCYGDPKFIGK-IGTDIEDYK 268 Query: 234 PTLPVILAFQRGTKREKN 251 + V+ A +R + +K+ Sbjct: 269 CSWLVVQALERADESQKS 286 >gi|297805334|ref|XP_002870551.1| hypothetical protein ARALYDRAFT_915906 [Arabidopsis lyrata subsp. lyrata] gi|297316387|gb|EFH46810.1| hypothetical protein ARALYDRAFT_915906 [Arabidopsis lyrata subsp. lyrata] Length = 189 Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 12/92 (13%) Query: 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 +LH KTA L A + ++ + L+ Y + + FQ+VDD+LD + Sbjct: 54 HLH----KTAALLEEAAILGVIMGDGTEEEIEKLRKYARCIRLLFQVVDDILDVTESTED 109 Query: 221 MGKNIGEDFR--------NGKPTLPVILAFQR 244 +GK +G+D R GK T P ++ +R Sbjct: 110 LGKTVGKDLRATTMVALMAGKLTYPRLIGLER 141 >gi|4680193|gb|AAD27558.1|AF111710_4 putative farnesyl pyrophosphate synthase [Oryza sativa Indica Group] Length = 495 Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 15/198 (7%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL-----SQAFCMV 121 L +E++ L+ DD++DDS RRG+ V S+ + D ++ ++ + Sbjct: 231 LGWCVEWLQAYFLVLDDIMDDSHTRRGQPCWFRV-PQVGSIAINDGIILRNHITRMLRLH 289 Query: 122 IETKSQEA--LEALSLVACTLAEGELRQLSLSKNLDVTEEDY---LH--VIKSKTAVL-F 173 K A L+ + V A G+L L + + Y +H +++ KT+ F Sbjct: 290 FRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNKYNIGVHRRIVQYKTSYYSF 349 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + + L++G + A++ + +GI FQ+ DD LD G+ +GK IG D + K Sbjct: 350 YLPVACALLLSGEDLTKYGAVEDILVKMGIYFQVQDDYLDCYGDPKFIGK-IGTDIEDYK 408 Query: 234 PTLPVILAFQRGTKREKN 251 + V+ A +R + +K+ Sbjct: 409 CSWLVVQALERADESQKS 426 >gi|46124813|ref|XP_386960.1| FPPS_GIBFU Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Gibberella zeae PH-1] Length = 347 Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 24/185 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVI 122 L E + L+ DD++D S RRG+ W Q V + D F+L A ++ Sbjct: 80 LGWMTELLQAFFLVSDDIMDSSITRRGQPC----WYRQEGVGMIAINDAFMLEMAIYTLL 135 Query: 123 ET--KSQEA-LEALSLVACTLAEGELRQL-------SLSKNLD-VTEEDYLHVIKSKTA- 170 + ++ A ++ + L T + EL QL + NLD + E Y ++ KTA Sbjct: 136 KKYFRTHPAYVDLIELFHETTFQTELGQLCDLLTAPEDNVNLDNFSLEKYSFIVIYKTAY 195 Query: 171 --VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 AL + L ++++QA + + LG FQ+ DD LD G+ +GK IG D Sbjct: 196 YSFYLPVALALHQLNLATPSNLKQA-EDILIPLGEYFQIQDDYLDNFGKPEHIGK-IGTD 253 Query: 229 FRNGK 233 ++ K Sbjct: 254 IKDNK 258 >gi|218188900|gb|EEC71327.1| hypothetical protein OsI_03373 [Oryza sativa Indica Group] Length = 356 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 31/212 (14%) Query: 62 DNHVLLAC----AIEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQ 104 + + LAC IE++ L+ DD++D+S RRGK + LV +Q Sbjct: 83 EEELFLACILGWGIEWLQAYFLVLDDIMDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQ 142 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQLSLSKNL-DVTEED-- 160 S + + +++ + + L+ + V G+ L Q++ ++ D+ + + Sbjct: 143 ISRIFRRYFCGKSYYV-------DLLDLFNEVEFQTTSGQLLDQITTNEGRKDLNKYNVH 195 Query: 161 -YLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 Y +++ KTA F + + L+ G +K + +G+ FQ DD LD GE Sbjct: 196 VYRRIVEYKTAYYSFYLPVACALLLFGESLDNYAQVKHILVEMGVYFQSQDDYLDCFGEP 255 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +GK IG D + K + + A +R +++K Sbjct: 256 EIIGK-IGSDIEDFKCSWLFVQALERADEKQK 286 >gi|110769981|ref|XP_001122575.1| PREDICTED: farnesyl pyrophosphate synthase-like, partial [Apis mellifera] Length = 309 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 34/208 (16%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +LA IE +H ++ +D+VD + +RR + W V VG ++ A +++ET Sbjct: 40 ILAWCIEIMHAVHIVMNDIVDHADMRRNQPT----W----HVKVGLGAINDA--LIMETC 89 Query: 126 SQEALEA-LSLVACTL-------------AEGELRQLSLSK------NLDVTEED-YLHV 164 Q+ LE L C + G + +S N D+ D Y + Sbjct: 90 IQKLLEKHFKLKNCYVELMNIFWKYNKKTGHGHRLDIFISTNWRKKANFDLFSMDRYNTL 149 Query: 165 IKSKTAVL-FSAALEVSSLIAGVQNS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 +K K + L F + AGV +S + + + + + +Q+ +D L+Y + ++G Sbjct: 150 VKYKMSYLSFIFPFSFTMRFAGVIDSEMHREAEKILLKICHFYQVQNDFLNYYSK-KKIG 208 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREK 250 D + GK T P+++A +R T +K Sbjct: 209 GKSETDIQEGKCTWPIVIALERATAEQK 236 >gi|308161121|gb|EFO63579.1| Farnesyl diphosphate synthase [Giardia lamblia P15] Length = 407 Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust. Identities = 65/280 (23%), Positives = 111/280 (39%), Gaps = 66/280 (23%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATAL---------MLEYRGDNHVLLACAI------E 72 + I +V+KY + GGK R L L +LE + L AI E Sbjct: 52 DHIVEVIKYNVV-GGKMTRGTLAADIFLQTVRFLFSGLLEDSNFSEELFNLAIDICLVQE 110 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL--LSQAFCMVIETKSQEAL 130 + A L+ DDV+D S +RRGK + R V G++ +V G L ++ + + +E K + L Sbjct: 111 ILQGAFLMIDDVIDHSTIRRGKPSWRAVVGDEQAVNDGLILWQIADSLVLYLEDKCGKTL 170 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDY-----------LHVIKS------------ 167 + + A +L ++LD + Y +++K+ Sbjct: 171 KIFEVYHQAKA-----NTTLGQHLDTFTKTYSQRHTMGHLNDTYILKTAYYTFYLPLIMG 225 Query: 168 -KTAVLF-------SAALE----------VSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 ++ VLF SA E + +L + + Q + M+LG +Q+ D Sbjct: 226 YRSGVLFGNMAIGTSATSEKGYTMQKVDSILNLQQRLDTDIEQQIYKISMDLGRLYQMQD 285 Query: 210 DVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 D LD+ E+ D+ K T P++ A + E Sbjct: 286 DFLDFYAP--EILHKESSDYLENKATWPLVRALELSASEE 323 >gi|270011024|gb|EFA07472.1| farnesyl pyrophosphate synthase [Tribolium castaneum] Length = 243 Score = 42.4 bits (98), Expect = 0.100, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 6/102 (5%) Query: 153 NLDV-TEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLV 208 NL++ T Y ++K KTA F + ++ +A + + RQA K+ M +G+ FQ+ Sbjct: 74 NLELFTMNKYNSIVKYKTAYYTFQLPVALAMYMANLYDPEMHRQA-KTILMEMGLFFQIQ 132 Query: 209 DDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 DD LD G+ GK G D R GK + ++A QR ++ Sbjct: 133 DDFLDCFGDPEVTGKK-GNDIREGKCSWLAVVALQRANPTQR 173 >gi|260814652|ref|XP_002602028.1| hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae] gi|229287333|gb|EEN58040.1| hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae] Length = 357 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 41/242 (16%) Query: 41 GGKRLRPMLTLATALML-------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGKR R + + + L E +++ IE++ L+ DD++D S RRG Sbjct: 59 GGKRNRGLSVITSYRFLVSSDQLTEENIHRAMVVGWCIEWLQAFFLVLDDIMDQSQTRRG 118 Query: 94 KVA-------ARLVWGNQTSVLVGDFLLSQAFCM----------VIETKSQEALEALSLV 136 + + + + + L + FC + + + + + SL Sbjct: 119 QPCWYRVEEVGNMAINDACYIESCIYRLLRRFCRGQPYYVDLLELFQGTTYKTIVGQSLD 178 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS--LIAGVQN-SVRQA 193 T +G +++LS + TEE Y ++K KTA +S L V++ +AG+ + + Sbjct: 179 LITSPDG---KVNLS---NFTEERYNAIVKYKTA-FYSFHLPVAAAMYMAGITSKESHEN 231 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF------QRGTK 247 K+ + +G FQ+ DD LD G+ GK +G D K + V+ A QR T Sbjct: 232 AKTILLEMGRFFQIQDDYLDCYGDPAVTGK-VGTDVEENKCSWLVVQALRLVDARQRATL 290 Query: 248 RE 249 +E Sbjct: 291 QE 292 >gi|115439359|ref|NP_001043959.1| Os01g0695300 [Oryza sativa Japonica Group] gi|56785155|dbj|BAD81810.1| putative farnesyl-pyrophosphate synthetase fps2 [Oryza sativa Japonica Group] gi|113533490|dbj|BAF05873.1| Os01g0695300 [Oryza sativa Japonica Group] Length = 307 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 41/217 (18%) Query: 62 DNHVLLAC----AIEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQ 104 + + LAC IE++ L+ DD++D+S RRGK + LV +Q Sbjct: 34 EEELFLACILGWGIEWLQAYFLVLDDIMDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQ 93 Query: 105 TSVLVGDFLLSQAFC---------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 S + + +++ + I+T S + L+ + T EG R+ N+ Sbjct: 94 ISRIFRRYFRGKSYYVDLLDLFNEVEIQTTSGQLLDQI-----TTNEG--RKDLNKYNVH 146 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLD 213 V Y +++ KTA +S L V+ + S+ +K + +G+ FQ DD LD Sbjct: 147 V----YRRIVEYKTA-YYSFYLPVACALLLFDESLDNYAQVKHILVEMGVYFQSQDDYLD 201 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 GE +GK IG D + K + + A +R +++K Sbjct: 202 CFGEPEIIGK-IGSDIEDFKCSWLFVQALERADEKQK 237 >gi|327294855|ref|XP_003232123.1| farnesyl pyrophosphate synthetase [Trichophyton rubrum CBS 118892] gi|326466068|gb|EGD91521.1| farnesyl pyrophosphate synthetase [Trichophyton rubrum CBS 118892] Length = 347 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 24/232 (10%) Query: 40 SGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R + TAL L E + + LL E + L+ DD++D S RRG Sbjct: 47 PGGKLNRGLSVPDTALALLEKPLTEEQFKHLGLLGWMTELLQAFFLVSDDIMDSSITRRG 106 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVA--------------CT 139 + G + F+L + ++++ + + LV C Sbjct: 107 EPCWYRRPGVGMIAINDAFMLESSIYVLLKKHFRSHTAYVDLVELFHEITFQTELGQLCD 166 Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF-SAALEVSSLIAGVQNSVRQALKSYG 198 L ++ L+ N ++ + +++ + K+ + AL + L ++RQA Sbjct: 167 LITAPEDKVDLN-NFNMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPKNLRQA-HDIL 224 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + LG FQ DD LD G+ ++GK IG D ++ K + V A +R T ++ Sbjct: 225 IPLGQYFQAQDDYLDVFGKPEQIGK-IGTDIQDNKCSWVVNQALKRCTPAQR 275 >gi|78191063|gb|ABB29856.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana sanderae] Length = 234 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 29/204 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVA--------------ARLVWGNQTSVLVGDF 112 L IE++ L+ DD++D+S RRG+ L+ + T +L F Sbjct: 5 LGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWYKLPKVGMIAVNDGILLRNHITRILKNHF 64 Query: 113 LLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 + +++ ++ + S L+ + E +L + SL + +++ Sbjct: 65 RAKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLPT--------HRRIVQY 116 Query: 168 KTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KTA F + + L+AG +K+ + +GI FQ+ DD LD + +GK IG Sbjct: 117 KTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFADPGVLGK-IG 175 Query: 227 EDFRNGKPTLPVILAFQRGTKREK 250 D ++ K + V+ A + + +K Sbjct: 176 TDIQDFKCSWLVVRALEVCNEEQK 199 >gi|225556978|gb|EEH05265.1| farnesyl-pyrophosphate synthetase [Ajellomyces capsulatus G186AR] Length = 347 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 24/202 (11%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQAFCMVIE 123 L EF+ L+ DD++D S RRG+ W + +V + D + ++ V+ Sbjct: 80 LGWMTEFLQAFFLVSDDIMDSSVTRRGEPC----WYRRPNVGMIAINDAFMLESVIYVLL 135 Query: 124 TKSQEALEA----LSLVACTLAEGELRQL-----SLSKNLDV---TEEDYLHVIKSKTA- 170 K + A L L + EL QL + N+D+ + + + ++ KTA Sbjct: 136 KKHFRSHPAYVDFLELFHEVTFQTELGQLCDLLTAPEDNVDLDNFSMDKFNFIVIYKTAY 195 Query: 171 --VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 AL + L +++RQA + LG FQ DD LD G+ ++GK IG D Sbjct: 196 YSFYLPVALALHYLQLATPSNLRQA-HDILIPLGQYFQAQDDYLDVFGKPEQIGK-IGTD 253 Query: 229 FRNGKPTLPVILAFQRGTKREK 250 ++ K + + A +R + ++ Sbjct: 254 IQDNKCSWVINQALKRCSAEQR 275 >gi|212960746|gb|ACJ38671.1| farnesyl pyrophosphate synthase [Chimonanthus praecox] Length = 358 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 33/228 (14%) Query: 62 DNHVLLAC----AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 + + LAC IE++ L+ DD++D S RRG+ V + LL Sbjct: 85 EEEIFLACVLGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVDMIAVNDGILLRNH 144 Query: 118 FCMVIETKSQEA------LEALSLVACTLAEGELRQL--------SLSKNLDVTEEDYLH 163 ++ +E L+ + V A G++ L LSK + Y Sbjct: 145 IPRILRRHFREKPYYVDLLDLFNEVEFQTASGQMLDLITTHEGESDLSK---YSMPVYRR 201 Query: 164 VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 +++ KTA F + + L++G +K+ + +G FQ+ DD LD G+ +G Sbjct: 202 IVQYKTAYYSFYLPVACALLMSGENLENFIDVKNILIEMGTYFQVQDDYLDCFGDPQVIG 261 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKA 270 K IG D + K + V+ A R + +K KI EN KA Sbjct: 262 K-IGTDIEDFKCSWLVVQALDRADENQK----------KILFENYGKA 298 >gi|10801558|dbj|BAB16692.1| GGPP synthase 2 [Hevea brasiliensis] Length = 126 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 20/128 (15%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--------------EALEALSL 135 LRRGK ++G +T++L GD LLS +F V A+ A L Sbjct: 4 LRRGKPTNHKMFGEETAILAGDALLSFSFEHVAAATKNVSPDRVVRAIAELGSAVGAAGL 63 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 VA + + E S K + + + +Y+H+ +KT+ L AA+ ++I G + + ++ Sbjct: 64 VAGQIVDIE----SEGKQVTLEDLEYIHI--NKTSKLLEAAVVCGAIIGGADDESTERVR 117 Query: 196 SYGMNLGI 203 Y +G+ Sbjct: 118 KYARCIGL 125 >gi|154285144|ref|XP_001543367.1| farnesyl pyrophosphate synthetase [Ajellomyces capsulatus NAm1] gi|150407008|gb|EDN02549.1| farnesyl pyrophosphate synthetase [Ajellomyces capsulatus NAm1] Length = 347 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 24/202 (11%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQAFCMVIE 123 L EF+ L+ DD++D S RRG+ W + +V + D + ++ V+ Sbjct: 80 LGWMTEFLQAFFLVSDDIMDSSVTRRGEPC----WYRRPNVGMIAINDAFMLESVIYVLL 135 Query: 124 TKSQEALEA----LSLVACTLAEGELRQL-----SLSKNLDV---TEEDYLHVIKSKTA- 170 K + A L L + EL QL + N+D+ + + + ++ KTA Sbjct: 136 KKHFRSHPAYVDFLELFHEVTFQTELGQLCDLLTAPEDNVDLDNFSMDKFNFIVIYKTAY 195 Query: 171 --VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 AL + L +++RQA + LG FQ DD LD G+ ++GK IG D Sbjct: 196 YSFYLPVALALHYLQLATPSNLRQA-HDILIPLGQYFQAQDDYLDVFGKPEQIGK-IGTD 253 Query: 229 FRNGKPTLPVILAFQRGTKREK 250 ++ K + + A +R + ++ Sbjct: 254 IQDNKCSWVINQALKRCSAEQR 275 >gi|222619102|gb|EEE55234.1| hypothetical protein OsJ_03111 [Oryza sativa Japonica Group] Length = 358 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 41/217 (18%) Query: 62 DNHVLLAC----AIEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQ 104 + + LAC IE++ L+ DD++D+S RRGK + LV +Q Sbjct: 85 EEELFLACILGWGIEWLQAYFLVLDDIMDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQ 144 Query: 105 TSVLVGDFLLSQAFC---------MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 S + + +++ + I+T S + L+ + T EG R+ N+ Sbjct: 145 ISRIFRRYFRGKSYYVDLLDLFNEVEIQTTSGQLLDQI-----TTNEG--RKDLNKYNVH 197 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLD 213 V Y +++ KTA +S L V+ + S+ +K + +G+ FQ DD LD Sbjct: 198 V----YRRIVEYKTA-YYSFYLPVACALLLFDESLDNYAQVKHILVEMGVYFQSQDDYLD 252 Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 GE +GK IG D + K + + A +R +++K Sbjct: 253 CFGEPEIIGK-IGSDIEDFKCSWLFVQALERADEKQK 288 >gi|118137651|pdb|2EWG|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With Minodronate gi|118137652|pdb|2EWG|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With Minodronate gi|118138036|pdb|2I19|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate gi|118138037|pdb|2I19|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate gi|158429227|pdb|2OGD|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-527 gi|158429228|pdb|2OGD|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-527 gi|169404558|pdb|2P1C|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-210 gi|169404559|pdb|2P1C|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-210 gi|229597759|pdb|3DYF|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-461 And Isopentyl Diphosphate gi|229597760|pdb|3DYF|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-461 And Isopentyl Diphosphate gi|229597761|pdb|3DYG|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-461 gi|229597762|pdb|3DYG|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-461 gi|229597763|pdb|3DYH|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-721 gi|229597764|pdb|3DYH|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-721 gi|229597838|pdb|3EFQ|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-714 gi|229597839|pdb|3EFQ|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-714 Length = 390 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 40/195 (20%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV----GDFLLSQAFCMVIETKS 126 IEF+ L+ DD++D+S RRGK W V V D LL +++ ++ Sbjct: 115 IEFLQAHYLVEDDIMDNSVTRRGKPC----WYRHPDVTVQCAINDGLLLKSWTHMMAMHF 170 Query: 127 -------QEALEALSLVACTLAEGEL----------------RQLSLSKNLDVTEEDYLH 163 Q+ L + V T A G+L Q + + + T +Y Sbjct: 171 FADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQPTTTDFAEFTLSNYKR 230 Query: 164 VIKSKTAVL-----FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 ++K KTA L VS + V V + L M +G FQ+ DDV+D Sbjct: 231 IVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEEL---AMLMGEYFQVQDDVMDCFTPP 287 Query: 219 NEMGKNIGEDFRNGK 233 +GK +G D ++ K Sbjct: 288 ERLGK-VGTDIQDAK 301 >gi|30522953|gb|AAO17735.1| farnesyl pyrophosphate synthase [Trypanosoma brucei] Length = 367 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 40/195 (20%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV----GDFLLSQAFCMVIETKS 126 IEF+ L+ DD++D+S RRGK W V V D LL +++ ++ Sbjct: 92 IEFLQAHYLVEDDIMDNSVTRRGKPC----WYRHPDVTVQCAINDGLLLKSWTHMMAMHF 147 Query: 127 -------QEALEALSLVACTLAEGEL----------------RQLSLSKNLDVTEEDYLH 163 Q+ L + V T A G+L Q + + + T +Y Sbjct: 148 FADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQPTTTDFAEFTLSNYKR 207 Query: 164 VIKSKTAVL-----FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 ++K KTA L VS + V V + L M +G FQ+ DDV+D Sbjct: 208 IVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEEL---AMLMGEYFQVQDDVMDCFTPP 264 Query: 219 NEMGKNIGEDFRNGK 233 +GK +G D ++ K Sbjct: 265 ERLGK-VGTDIQDAK 278 >gi|213407468|ref|XP_002174505.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus yFS275] gi|212002552|gb|EEB08212.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus yFS275] Length = 354 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 22/230 (9%) Query: 41 GGKRLRPMLTLATALMLEYRG--DNH----VLLACAIEFIHTATLLHDDVVDDSALRRGK 94 GGK R + + T +L + DN LL IE + L+ DD++D+S RRG+ Sbjct: 55 GGKYNRGLSVIDTYEILSGKALDDNSYFRAALLGWCIELLQAFFLVADDMMDESKTRRGQ 114 Query: 95 VAARLVWGNQTSVLVGD-FLLSQAFCMVI------ETKSQEALEALSLVACTLAEG-ELR 146 L+ N S+ + D F+L A ++ ET + L+ V G EL Sbjct: 115 PCWYLM-PNVGSIAINDSFMLESAIYFLLKKHFRHETYYVDLLDLFHEVTFQTTLGQELD 173 Query: 147 QLSLSKN-LDV---TEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVR-QALKSYGMN 200 L+ +N +D+ +++ + ++ KTA F + ++ +A V Q + Sbjct: 174 LLTAPENHVDLSKFSQDKHAFIVIFKTAYYSFYLPVALAMCMANVATPDNLQRASDVLIP 233 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LG FQ+ DD LD G+ + GK +G D + K + + +A + + ++ Sbjct: 234 LGKYFQIQDDYLDCYGDPSVTGK-VGTDILDNKCSWLINVALAKASPEQR 282 >gi|113475604|ref|YP_721665.1| IdsA [Trichodesmium erythraeum IMS101] gi|110166652|gb|ABG51192.1| IdsA [Trichodesmium erythraeum IMS101] Length = 101 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%) Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK--------VA 96 LRP + ++ + GD + A A+E H A L+HDD+ + S RRGK +A Sbjct: 2 LRPTMCISAGRAVGGMGDKTMATATALELYHNAFLIHDDIENGSESRRGKETLHQSIGMA 61 Query: 97 ARLVWGNQTSVL-VGDFLLSQAFCMVIET 124 + G+ T++L VG L + +F V +T Sbjct: 62 RAINAGDATNILAVGMLLKNLSFIGVQKT 90 >gi|218197202|gb|EEC79629.1| hypothetical protein OsI_20844 [Oryza sativa Indica Group] Length = 355 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 15/198 (7%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL-----SQAFCMV 121 L +E++ L+ DD++DDS RRG+ V S+ + D ++ ++ + Sbjct: 91 LGWCVEWLQAYFLVLDDIMDDSHTRRGQPCWFRV-PQVGSIAINDGVILRNHITRMLRLH 149 Query: 122 IETKSQEA--LEALSLVACTLAEGELRQLSLSKNLDVTEEDY---LH--VIKSKTAVL-F 173 K A L+ + V A G+L L + + Y +H +++ KT+ F Sbjct: 150 FRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNKYNIGVHRRIVQYKTSYYSF 209 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + + L++G + A++ + +GI FQ+ DD LD G+ +GK IG D + K Sbjct: 210 YLPVACALLLSGEDLTKYGAVEDILVKMGIYFQVQDDYLDCYGDPKFIGK-IGTDIEDYK 268 Query: 234 PTLPVILAFQRGTKREKN 251 + V+ A +R + +K+ Sbjct: 269 CSWLVVQALERADESQKS 286 >gi|153791944|ref|NP_001093302.1| farnesyl diphosphate synthase 3 [Bombyx mori] gi|146424710|dbj|BAF62115.1| farnesyl diphosphate synthase 3 [Bombyx mori] Length = 385 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 37/232 (15%) Query: 41 GGKRLRPMLTLATALMLEYRGDN----HVLLA----CAIEFIHTATLLHDDVVDDSALRR 92 GGK++R + T+ + E + +N V LA E + +++DD++D S+ RR Sbjct: 87 GGKKIRGITTVLAYELFE-KPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRR 145 Query: 93 GKVA--------------ARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSL--- 135 G A LV+G+ +L F ++ + +++ EAL S+ Sbjct: 146 GVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDI-FNEALLYTSMGQH 204 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS---SLIAGVQNSVRQ 192 + +A + SL T E Y ++K KT+ +S L V L QN+ + Sbjct: 205 LDYAMAHRNKQDYSL-----FTTERYYSIVKYKTS-YYSIKLPVVLGLILTQNRQNAPIE 258 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 ++ +G FQ+ DD +D G GK G D + GK + + A QR Sbjct: 259 DIEGICFEIGKLFQIQDDFMDCFGNETVTGKK-GTDIQEGKCSWLAVNALQR 309 >gi|149046943|gb|EDL99691.1| rCG58492, isoform CRA_a [Rattus norvegicus] Length = 390 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 14/158 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ S L+ + + +GN+ +VL GDFLL+ A + + Sbjct: 149 LAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKIAVLSGDFLLANACNGLALLQ 208 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY-LHVIKSKT--------AVLFSAA 176 + + +E L+ L +G ++ S S + +D + K +T A AA Sbjct: 209 NTKVVELLASALMDLVQGIYQENSASTQGNPIPDDIRISTWKEQTFLSHCALLAKSCKAA 268 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +E++ A VQ+ Q YG ++ ++ ++ D+ + Sbjct: 269 MELAKHDAAVQDMAFQ----YGKHMAMSHKINSDLQPF 302 >gi|271966483|ref|YP_003340679.1| dehydrogenase (flavoprotein)-like protein [Streptosporangium roseum DSM 43021] gi|270509658|gb|ACZ87936.1| Dehydrogenase (flavoprotein)-like protein [Streptosporangium roseum DSM 43021] Length = 671 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 22/132 (16%) Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE--GELRQLS 149 R R+ W ++VL GDFLL+QA +V + + V+ + A+ GEL L Sbjct: 462 RAAPGRRVDWAVASTVLAGDFLLAQASRLVAASAPE--------VSWSFADWLGELAALR 513 Query: 150 LSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI----AGVQNSVRQALKSYGMNLGIAF 205 + +D +S+ +F++ LE S I G +AL+ +G + G AF Sbjct: 514 AVR-IDPAG-------RSRAGEVFASLLEFPSRIGAQLGGASPETVRALRDFGNHSGHAF 565 Query: 206 QLVDDVLDYRGE 217 ++VL RGE Sbjct: 566 LHAEEVLAVRGE 577 >gi|3122099|sp|Q92235|FPPS_GIBFU RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|1524043|emb|CAA65641.1| farnesyl pyrophosphate synthetase [Gibberella fujikuroi] Length = 347 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 24/185 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVI 122 L E + L+ DD++D S RRG+ W Q V + D F+L A ++ Sbjct: 80 LGWMTELLQAFFLVSDDIMDSSITRRGQPC----WYRQEGVGMIAINDAFMLESAIYTLL 135 Query: 123 ETKSQEALEALSLVAC---TLAEGELRQL-------SLSKNLD-VTEEDYLHVIKSKTA- 170 + + L+ T + EL QL + NLD + E Y ++ KTA Sbjct: 136 KKYFRSHPAYFDLIESFHETTFQTELGQLCDLLTAPEDNVNLDNFSLEKYSFIVIYKTAY 195 Query: 171 --VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 AL + L ++++QA + + LG FQ+ DD LD G+ +GK IG D Sbjct: 196 YSFYLPVALALHQLNLATPSNLKQA-EDILIPLGEYFQIQDDYLDNFGKPEHIGK-IGTD 253 Query: 229 FRNGK 233 ++ K Sbjct: 254 IKDNK 258 >gi|229597840|pdb|3EGT|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-722 gi|229597841|pdb|3EGT|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With Bisphosphonate Bph-722 Length = 413 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 40/195 (20%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV----GDFLLSQAFCMVIETKS 126 IEF+ L+ DD++D+S RRGK W V V D LL +++ ++ Sbjct: 138 IEFLQAHYLVEDDIMDNSVTRRGKPC----WYRHPDVTVQCAINDGLLLKSWTHMMAMHF 193 Query: 127 -------QEALEALSLVACTLAEGEL----------------RQLSLSKNLDVTEEDYLH 163 Q+ L + V T A G+L Q + + + T +Y Sbjct: 194 FADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQPTTTDFAEFTLSNYKR 253 Query: 164 VIKSKTA-----VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 ++K KTA + L VS + V V + L M +G FQ+ DDV+D Sbjct: 254 IVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEEL---AMLMGEYFQVQDDVMDCFTPP 310 Query: 219 NEMGKNIGEDFRNGK 233 +GK +G D ++ K Sbjct: 311 ERLGK-VGTDIQDAK 324 >gi|94469541|gb|ABF20220.1| multi-functional prenyl transferase [Neotyphodium lolii] Length = 788 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 18/217 (8%) Query: 36 YLIFSGGKR-LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK 94 YL+ GK + + L + L+ + D + L+ ++ +H + +L DD+ + SALRR + Sbjct: 11 YLVSQCGKHHFKTFVQLLSPLLQDEDPDRYALILDIMDAVHFSAILIDDIANQSALRRNQ 70 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKN- 153 AA +V+G + +L + + A E L+ + + +G+ L ++ Sbjct: 71 PAAHVVFGETETATRAYLVLLRVVNRTMRENPVLAGELLNSLE-EIHQGQDESLVWRRDG 129 Query: 154 ---LDVTEED----YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 V +++ Y+ + + KT LF + + L+A L + G+ Q Sbjct: 130 LETFPVADDERLAAYVRMSRLKTGSLF---VLLGRLLANGGTEFDDLL----VRFGLYAQ 182 Query: 207 LVDDVLD-YRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 L D + Y E ++ ED RNG+ + PV++A Sbjct: 183 LQHDCKNIYSPEYALNKGSVAEDLRNGELSYPVVVAL 219 >gi|322696478|gb|EFY88270.1| farnesyl pyrophosphate synthetase 1 [Metarhizium acridum CQMa 102] Length = 248 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 31/229 (13%) Query: 85 VDDSALRRGKVAARLVWGNQTSV---LVGDF-LLSQAFCMVIETKSQEALEALSLVACTL 140 +DDS RRG+ W Q + + D +L +++T ++ +++V + Sbjct: 1 MDDSTTRRGQP----CWHRQPQIGLMAINDACILKSTIFFLLKTFFRQHPAYINMVDLFV 56 Query: 141 AEG---ELRQLS---LSKNLDV---TEEDYLHVIKSKTAVLFSA----ALEVSSLIAGVQ 187 G EL QLS +K D+ T E Y ++K K++ S ALE L A + Sbjct: 57 DNGLHTELGQLSDLAAAKEPDIEKFTMEQYWAIVKDKSSYSISGPVTLALEYWQL-ATPK 115 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 N Q + + + LG FQ+ DD +D G+ GK+ G D ++ K T +I A R Sbjct: 116 N--LQQTRDFSVALGEYFQVNDDYVDVFGDYATTGKH-GTDIQDNKCTWFIIEALSRANN 172 Query: 248 REKNFWKSTINDGKIS-VENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 ++ S V+ +K+ F + +A +R+Y Q+AK Sbjct: 173 EQRQRLLQGYGKKDASRVDEVKRIFAELELQQA-----FRSYEEQQRAK 216 >gi|148749598|gb|ABR09548.1| farnesyl diphosphate synthase isoform [Hevea brasiliensis] Length = 342 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 37/259 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQTSVLVGDFL 113 L IE++ L+ DD++D S RRG+ +AA ++ N ++ Sbjct: 78 LGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRVPKVGLIAANDGILLRNHIPRILKKHF 137 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 +A+ + + E + Q A + + L+ E +L + +LS LH ++ Sbjct: 138 RGKAYYVDLLDLFNEVEFQTASGQIIDLITTLEGEKDLSKYTLS----------LHRRIV 187 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + LIAG +K + +GI FQ+ DD LD G+ +GK Sbjct: 188 QYKTAYYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLDCFGDPETIGK- 246 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL-VDT 283 IG D + + + V+ A + + +K + GK ++ K ++ E + V T Sbjct: 247 IGTDIEDFECSWLVVKALELCNEEQKKVLYE--HYGKADPASVAKVKVLYNELKLQGVFT 304 Query: 284 EYRAYSYGQKAKDSLRCLP 302 EY SY +K S+ P Sbjct: 305 EYENESY-KKLATSIEAHP 322 >gi|134075491|emb|CAK48052.1| unnamed protein product [Aspergillus niger] Length = 418 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 12/173 (6%) Query: 73 FIH--TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET---KSQ 127 F H ++++ DD+ D S LRRG+ A +++G + + + +A + T SQ Sbjct: 169 FAHLCASSVMLDDIQDGSDLRRGQPATHILYGESQTTNSALYGIVKALSLAASTDGKHSQ 228 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEE-DYLHVIKSKTAVLFSAALEVSSLIAGV 186 LE+LS G+ ++ + +Y++++ KT F AL + AG Sbjct: 229 ILLESLS----DSIRGQALEVHWRYHARCPSNMEYINMVDCKTGSFFRCALRLLEAEAGT 284 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + L LG FQ+ +D + + K ED GK +LP+I Sbjct: 285 K--AIPELHHLVTLLGRYFQVYNDYRNLSDDKYIATKGFCEDLSEGKFSLPLI 335 >gi|215447704|ref|ZP_03434456.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T85] Length = 119 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+AFQ VDD++ G+ GK +G D K TLPV+ A Sbjct: 1 MGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAAL 42 >gi|114608725|ref|XP_518665.2| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase, subunit 2 isoform 2 [Pan troglodytes] Length = 355 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 14/158 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT--------AVLFSAAL 177 + + +E L+ L +G + S SK +T++ + K +T A AA+ Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAM 267 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD-DVLDY 214 E++ A VQ+ Q YG ++ ++ + + LDY Sbjct: 268 ELAKHDAEVQDMAFQ----YGKHMAMSHKAQEKGRLDY 301 >gi|270356886|gb|ACZ80672.1| putative isoprenoid biosynthesis-related protein [Filobasidiella depauperata] Length = 375 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 28/234 (11%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNH------VLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R M + T +L+ R N +L +E + L+ DD++D S RRG Sbjct: 72 PGGKLNRGMSVVDTVEILKGRDLNEEEYVKAAILGWCVELLQAYFLVADDIMDQSVTRRG 131 Query: 94 KVAARLVW---GNQTSVLVGD-FLLSQAFCMVIETK---SQEALEALSLVACTLAEGELR 146 + W N ++ + D F+L A +++ + ++ + L T + EL Sbjct: 132 QPC----WYKMPNVGNIAINDAFMLEAAIYHLLKKHFRSEKYYVDLMELFLETTFQTELG 187 Query: 147 QL-----SLSKNLDVT----EEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK-S 196 QL + ++D+ E+ +L V+ F + ++ ++G+++ L Sbjct: 188 QLVDLITAPEDHVDLNKFSLEKHHLIVVYKTAFYSFYLPVALAMRMSGIEDKDAYDLAVK 247 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + LG FQ+ DD LD G+ +GK IG D + K + V A T ++ Sbjct: 248 ILIPLGEYFQVQDDYLDCYGKPEHIGK-IGTDILDNKCSWNVNTALAYATPEQR 300 >gi|4894899|gb|AAD32648.1| farnesyl diphosphate synthase [Artemisia annua] Length = 343 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 46/259 (17%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQ 104 D+ + L+ A IE++ L+ DD++D+S RRG+ +AA ++ N Sbjct: 70 DDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLLKVGMIAANDGILLRNH 129 Query: 105 TSVLVGDFLLSQAFCM---------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 ++ + + + VI+T S + ++ L+ + E +L + SLS Sbjct: 130 VPRILKKHFRGKPYYVDLVDLFNEGVIQTASGQMID---LIPTLVGEKDLSKYSLSI--- 183 Query: 156 VTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 + +++ KTA F + + L+ G +K+ + +G FQ+ DD LD Sbjct: 184 -----HRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQDDYLDC 238 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK---ISVENLKKAF 271 G +GK IG D + K + V+ A + + +K N GK SV +K+ + Sbjct: 239 FGAPEVIGK-IGTDIEDFKCSWLVVKALELANEEQKKVLHE--NYGKKDPASVAKVKEVY 295 Query: 272 IIMRENRALVDTEYRAYSY 290 + N V +Y A SY Sbjct: 296 HTL--NLQAVFEDYEATSY 312 >gi|302544313|ref|ZP_07296655.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Streptomyces hygroscopicus ATCC 53653] gi|302461931|gb|EFL25024.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Streptomyces himastatinicus ATCC 53653] Length = 266 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 35/220 (15%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 SDV I + ++L GG+RLRP+L L A + V A +E H AT HDDV Sbjct: 30 SDVPFISEAARHLARPGGRRLRPLLVLLAARFGDPDAPGVVPAAVVVELTHLATRYHDDV 89 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACT---LA 141 R +VL+GDFL ++A ++ + A+ L A L Sbjct: 90 -------------RHEAKPSVAVLIGDFLFARASRLLAGLGPR----AVRLQADAFKRLV 132 Query: 142 EGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL 201 G++ + + ++ +L + ++T L + + + ++ +G + L YG L Sbjct: 133 SGQILETTGPRDGHDPVAHHLRTLAARTGALTAVSGRLGAVTSGATEEIADTLAVYGERL 192 Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 G+A L ++ R V G PTLPV+L+ Sbjct: 193 GVARHLAAEL---RTPV------------QGAPTLPVLLS 217 >gi|119499053|ref|XP_001266284.1| farnesyl-pyrophosphate synthetase [Neosartorya fischeri NRRL 181] gi|119414448|gb|EAW24387.1| farnesyl-pyrophosphate synthetase [Neosartorya fischeri NRRL 181] Length = 347 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 16/193 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET- 124 +L E + L+ DD++D S RRG+ G + F+L ++++ Sbjct: 79 ILGWLTELLQAFFLVSDDMMDSSITRRGQPCWYRHPGVGLIAINDSFMLESGIYVILKKH 138 Query: 125 -KSQEA-LEALSLVACTLAEGELRQL-----SLSKNLDV---TEEDYLHVIKSKTAVLFS 174 +S A ++ L L T + EL QL + +D+ + E Y+ ++ KTA +S Sbjct: 139 FRSHPAYVDFLELFHETTWQTELGQLCDLITAPEDKVDLDNFSMEKYMFIVTYKTAY-YS 197 Query: 175 AALEVSSLIAGVQNSVRQALKSYG---MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L V+ + ++ + + L+ + LG FQ+ DD LD G+ +GK IG D ++ Sbjct: 198 FYLPVALALLYLELATPENLQQTHDILIPLGQYFQVQDDYLDAYGDPAVIGK-IGTDIQD 256 Query: 232 GKPTLPVILAFQR 244 K + + A QR Sbjct: 257 NKCSWLINQALQR 269 >gi|196006065|ref|XP_002112899.1| hypothetical protein TRIADDRAFT_56502 [Trichoplax adhaerens] gi|190584940|gb|EDV25009.1| hypothetical protein TRIADDRAFT_56502 [Trichoplax adhaerens] Length = 382 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 26/252 (10%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E I A ++H VV+ + L GN+ +VL+GDFLL++A + + ++ Sbjct: 141 LAEITEIIRMAQIIHTGVVNLPEPIASEEDKELQLGNKMAVLIGDFLLAKASNGLAKLEN 200 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV----LFSAALEVSSL 182 + ++ +S + EGE ++ + DY+++ + +T + L S + + + Sbjct: 201 TQVVQLMSEAISEMMEGEFLCSTIQDVIKSDIIDYVNLWEQRTLLRKGSLLSKSCQCALK 260 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + + ++G NL QL ++ ++++ G I D+ +LP +LA Sbjct: 261 LVNHSEEAQMVANNFGQNLAYTQQLSLELSAL--QLDDTGSQI--DY----TSLPALLAL 312 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 Q K+T+ I +K +++ E + + +T Y K DSL Sbjct: 313 QNSED------KATLFSSNIQFYKHQK--LVLDEVKTVYET------YKSKLLDSLAYFQ 358 Query: 303 DSSWKKSLMEVV 314 D K +L ++V Sbjct: 359 DCDAKTALEKIV 370 >gi|149046944|gb|EDL99692.1| rCG58492, isoform CRA_b [Rattus norvegicus] Length = 329 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 14/158 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ S L+ + + +GN+ +VL GDFLL+ A + + Sbjct: 88 LAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKIAVLSGDFLLANACNGLALLQ 147 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY-LHVIKSKT--------AVLFSAA 176 + + +E L+ L +G ++ S S + +D + K +T A AA Sbjct: 148 NTKVVELLASALMDLVQGIYQENSASTQGNPIPDDIRISTWKEQTFLSHCALLAKSCKAA 207 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +E++ A VQ+ Q YG ++ ++ ++ D+ + Sbjct: 208 MELAKHDAAVQDMAFQ----YGKHMAMSHKINSDLQPF 241 >gi|226508116|ref|NP_001141329.1| hypothetical protein LOC100273420 [Zea mays] gi|194704004|gb|ACF86086.1| unknown [Zea mays] gi|238008686|gb|ACR35378.1| unknown [Zea mays] Length = 355 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 35/211 (16%) Query: 66 LLACA----IEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTSVL 108 LAC IE++ L+ DD++D+S RRG+ V ++ N S + Sbjct: 86 FLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRI 145 Query: 109 VGDFLLSQAFCMVI-------ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161 + + + + I E K+ + L L+ E +L + +L+ + Sbjct: 146 LQRHFKGKPYYVDIIDLFNEVEFKTASG-QMLDLITTHEGEKDLTKYNLTV--------H 196 Query: 162 LHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNE 220 +++ KTA F + + L+AG +K+ + +G FQ+ DD LD G+ Sbjct: 197 RRIVQYKTAYYSFYLPVACALLLAGENLENFVDVKNILVEMGTYFQVQDDYLDCFGDPEF 256 Query: 221 MGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +GK IG D + K + V+ A +R + +K+ Sbjct: 257 IGK-IGTDIEDYKCSWLVVQALERAAENQKS 286 >gi|224808192|gb|ACN63187.1| farnesyl diphosphate synthase [Euphorbia pekinensis] Length = 342 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 37/262 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQTSVLVGDFL 113 L IE++ L+ DD++D S RRG+ +AA ++ N ++ Sbjct: 78 LGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRLPKVGMIAANDGIMLRNHIPRILKKHF 137 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 + + + + E + Q A + + L+ E +L + +LS LH ++ Sbjct: 138 RGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLNKYTLS----------LHRRIV 187 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + L+AG +++ + +GI FQ+ DD LD G+ +GK Sbjct: 188 QYKTAYYSFYLPVACALLMAGESLDNHIDVQNILVQMGIYFQVQDDYLDCYGDPKTIGK- 246 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDT 283 IG D + K + V+ A + + +K GK E++ K ++ E N + Sbjct: 247 IGTDIEDFKCSWMVVKALEVCNEEQKKVLHELY--GKPDPESVAKVKVLYNELNLQGIFM 304 Query: 284 EYRAYSYGQKAKDSLRCLPDSS 305 EY SY +K S+ P + Sbjct: 305 EYENQSY-EKLITSIEAHPSKA 325 >gi|264681462|ref|NP_001161125.1| decaprenyl-diphosphate synthase subunit 2 [Sus scrofa] gi|262204918|dbj|BAI48039.1| prenyl (decaprenyl) diphosphate synthase subunit 2 [Sus scrofa] Length = 394 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 119/270 (44%), Gaps = 31/270 (11%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 142 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 201 Query: 126 SQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKT--------AVLFSAA 176 + + +E L+ L +G + S S K +T++ + K +T A AA Sbjct: 202 NTKVVELLASALMDLVQGVYHENSTSAKENRITDDIGISTWKEQTFLSHGALLAKSCQAA 261 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +E++ A VQ+ Q YG ++ ++ ++ D+ + + + + + Sbjct: 262 MELAKHDAEVQDMAFQ----YGKHMAMSHKINSDLQPF------IKEKTSDSLTFNLNSA 311 Query: 237 PVILAFQRGTKREKNFWKSTI----NDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292 PV+L Q R+ W I GK+ L++ + + +D +G Sbjct: 312 PVVL-HQEFLGRD--LWIKQIRKAQEKGKLDYAKLRETIKAGKGVTSAIDL---CRYHGN 365 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 366 KALEALESFPPSEARTALENIV-FAVTRFS 394 >gi|164605010|dbj|BAF98301.1| farnesyl-diphosphate synthase [Hevea brasiliensis] Length = 342 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 36/247 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQTSVLVGDFL 113 L IE++ L+ DD++D S RRG+ +AA ++ N ++ Sbjct: 78 LGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRVPKVGLIAANDGILLRNHIPRILKKHF 137 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 +A+ + + E + Q A + + L+ E +L + +LS LH ++ Sbjct: 138 RGKAYYVDLLDLFNEVEFQTASGQMIDLITTLEEEKDLSKYTLS----------LHRRIV 187 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + LIAG +K + +GI FQ+ DD LD G+ +GK Sbjct: 188 QYKTAYYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLDCFGDPETIGK- 246 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRAL-VDT 283 IG D + K + V+ A + + ++ + GK ++ K ++ E + V T Sbjct: 247 IGTDIEDFKCSWLVVKALELCNEEQRKVLYE--HYGKADPASVAKVKVLYNELKLQGVFT 304 Query: 284 EYRAYSY 290 EY SY Sbjct: 305 EYENESY 311 >gi|157869471|ref|XP_001683287.1| farnesyl pyrophosphate synthase [Leishmania major strain Friedlin] gi|68224171|emb|CAJ04700.1| farnesyl pyrophosphate synthase [Leishmania major strain Friedlin] Length = 362 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 26/188 (13%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD--FLLSQAFCMVIE----- 123 IE + L+ DD++D S RRGK L G V + D LL+ A M + Sbjct: 87 IEMLQAHFLVEDDIMDHSKTRRGKPCWYLHPGVTAQVAINDGLILLAWATQMALHYFADR 146 Query: 124 ----------------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 T + + S+V + ++ + + ++ T ++ ++ Sbjct: 147 PFLAEVLRVFHDVDLTTTIGQLYDVTSMVDSAKLDAKVAHANTTDYVEYTPFNHRRIVVY 206 Query: 168 KTAVL-FSAALEVSSLIAGVQNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA + L + L++G V ++A M +G FQ+ DDV+D ++GK I Sbjct: 207 KTAYYTYWLPLVMGLLVSGTLEKVDKKATHKVAMVMGEYFQVQDDVMDCFTPPEKLGK-I 265 Query: 226 GEDFRNGK 233 G D + K Sbjct: 266 GTDIEDAK 273 >gi|13537421|dbj|BAB40665.1| farnesyl pyrophosphate synthase [Humulus lupulus] gi|13537423|dbj|BAB40666.1| farnesyl pyrophophate synthase [Humulus lupulus] Length = 342 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 65/290 (22%), Positives = 119/290 (41%), Gaps = 48/290 (16%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK- 94 Y + GGK L T+ L IE++ L+ DD++D+S RRG+ Sbjct: 58 YQLLKGGKELTEEEIFLTSA-----------LGWCIEWLQAYFLVLDDIMDNSVTRRGQP 106 Query: 95 ----------VAAR--LVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEAL-EALSLV 136 +AA ++ N ++ +++ + + E + Q A + + L+ Sbjct: 107 CWFRVPKVGLIAANDGILLRNHIPRILKKHFKGKSYYVDLLDLFNEVEFQTASGQMIDLI 166 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLH--VIKSKTAVL-FSAALEVSSLIAGVQNSVRQA 193 E +L + S+ LH +++ KTA F + + ++AG Sbjct: 167 TTIEGEKDLSKYSIP----------LHHRIVQYKTAYYSFYLPVACALVMAGENLDNHVD 216 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 +K+ + +G FQ+ DD LD G + +GK IG D + K + V+ A + T+ +K Sbjct: 217 VKNVLIEMGTYFQVQDDYLDCFGHPDVIGK-IGTDIEDFKCSWLVVKALEIATEEQKKML 275 Query: 254 KSTINDG-KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 G + SV+ +K+ + + D E +Y QK S+ P Sbjct: 276 FEHYGKGDEASVKKVKELYKALDLEGVFADYENASY---QKLIKSIEAHP 322 >gi|213513990|ref|NP_001133850.1| Farnesyl pyrophosphate synthetase [Salmo salar] gi|209155566|gb|ACI34015.1| Farnesyl pyrophosphate synthetase [Salmo salar] Length = 359 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 41/234 (17%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVA--ARLVWG----NQTSVLVGD-FLLSQA 117 +L+ IE + L+ DD++D S RRG+ R G N + +L G + L + Sbjct: 92 LLVGWCIELLQAFFLVADDIMDASVTRRGQPCWYKRERVGLDAINDSFLLEGSIYRLLRR 151 Query: 118 FC-----------MVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 C + ET Q L +AL L+ + +L + ++ E Y ++ Sbjct: 152 HCRAQPYYVHLLELFTETSFQTELGQALDLMTAPPGQIDLNRFTM--------ERYKAIV 203 Query: 166 KSKTAVLFSAALEVSS--LIAGV-----QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV 218 K KTA +S L V++ +AG+ N+ + L + +G FQ+ DD LD G+ Sbjct: 204 KYKTA-FYSFYLPVAAAMYMAGIDSEEEHNNAKHIL----LEMGEFFQIQDDYLDCYGDP 258 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN-DGKISVENLKKAF 271 GK IG D ++ K V+ A T ++ +S +SVE +K + Sbjct: 259 AVTGK-IGTDIQDNKCGWLVVTALGVMTPEQRAELESCYGRHDSVSVEKVKALY 311 >gi|289704967|ref|ZP_06501382.1| polyprenyl synthetase [Micrococcus luteus SK58] gi|289558303|gb|EFD51579.1| polyprenyl synthetase [Micrococcus luteus SK58] Length = 371 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 86/241 (35%), Gaps = 59/241 (24%) Query: 40 SGGKRLRPMLTLATALMLEYRG------DNHVLLA-CAIEFIHTATLLHDDVVDDSALRR 92 +GGKRLR +L L +R D + A A E A L+HDD++D S RR Sbjct: 56 AGGKRLRAVLA-----WLGWRAAGGEAEDPRIAEAGAAFELFQAAALIHDDILDRSDTRR 110 Query: 93 GKVA----------------ARLVWGNQTSVLVGDFLLS---QAFCMVIETKSQEALEAL 133 G + A +G ++L GD L AF V+ +E Sbjct: 111 GMPSVHRRFESLHREAGWRHAAEHFGVSAAILAGDVALGMSETAFARVLAGTPRE----- 165 Query: 134 SLVACTLAEGELRQLSLS----KNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A EL ++ + LDV E + A + S+ + V Sbjct: 166 -----DRARAELERMRFGVMAGQYLDVVAEMAPAARDAREAEAAAEAVVEHKSARYSAVH 220 Query: 188 NSVRQ------------ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A + G+AFQ DD+L G+ GK G+D R GK T Sbjct: 221 PLALGGLLAGADDGLVTAFARVSLPFGMAFQYRDDLLGVFGDPATTGKPAGDDLREGKQT 280 Query: 236 L 236 + Sbjct: 281 V 281 >gi|1749416|dbj|BAA13767.1| unnamed protein product [Schizosaccharomyces pombe] Length = 339 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 32/207 (15%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD---------FLLSQ 116 +L +E + + L+ DD++D S RRG+ L+ G ++ + D FLL + Sbjct: 64 VLGWMVELLQSFFLIADDIMDASKTRRGQPCWYLMPG-VGNIAINDAFMVESAIYFLLKK 122 Query: 117 AF----CMV--IE-----TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 F C V IE T E + L L+ +L + SL K + ++ Sbjct: 123 HFRQESCYVDLIELFHDVTFQTELGQQLDLLTAPEDSVDLSKFSLQK--------HSFIV 174 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 KTA F +E++ +AGV + + + LG FQ+ DD LD G+ GK Sbjct: 175 IYKTAFYSFYLPVELAMHLAGVATPENLKCAQDILIILGKYFQVQDDYLDCYGDPTVTGK 234 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREK 250 IG D + K + + LA + T ++ Sbjct: 235 -IGTDILDNKCSWIINLALAKCTPEQR 260 >gi|239917873|ref|YP_002957431.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] gi|239839080|gb|ACS30877.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] Length = 373 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 86/241 (35%), Gaps = 59/241 (24%) Query: 40 SGGKRLRPMLTLATALMLEYRG------DNHVLLA-CAIEFIHTATLLHDDVVDDSALRR 92 +GGKRLR +L L +R D + A A E A L+HDD++D S RR Sbjct: 58 AGGKRLRAVLA-----WLGWRAAGGEAEDPRIAEAGAAFELFQAAALIHDDILDRSDTRR 112 Query: 93 GKVA----------------ARLVWGNQTSVLVGDFLLS---QAFCMVIETKSQEALEAL 133 G + A +G ++L GD L AF V+ +E Sbjct: 113 GMPSVHRRFESLHREAGWRHAAEHFGVSAAILAGDVALGMSETAFARVLAGTPRE----- 167 Query: 134 SLVACTLAEGELRQLSLS----KNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 A EL ++ + LDV E + A + S+ + V Sbjct: 168 -----DRARAELARMRFGVMAGQYLDVVAEMAPAARDAREAEAAAEAVVEHKSARYSAVH 222 Query: 188 NSVRQ------------ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A + G+AFQ DD+L G+ GK G+D R GK T Sbjct: 223 PLALGGLLAGADDGLVTAFARVSLPFGMAFQYRDDLLGVFGDPATTGKPAGDDLREGKQT 282 Query: 236 L 236 + Sbjct: 283 V 283 >gi|89276803|gb|ABD66600.1| putative farnesyl-diphosphate synthetase [Tuber borchii] Length = 347 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 31/218 (14%) Query: 41 GGKRLRPMLTLATALML---------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALR 91 GGK R M T +L EY+ +L E + L+ DD++D S R Sbjct: 47 GGKYNRGMTVPETYRLLTGKETLSLAEYK--LSAILGWCTELLQAMFLVADDIMDSSKTR 104 Query: 92 RGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACTLAEGELRQL 148 RG L+ G + FLL + ++++ + ++ + L + EL QL Sbjct: 105 RGSPCWYLMEGVGNIAINDSFLLESSIYVLLKKYFKGTDYYIDLVELFHDVTWKTELGQL 164 Query: 149 -----SLSKNLDVTE---EDYLHVIKSKTAVLFSAALEVS-----SLIAGVQNSVRQALK 195 S ++D+ + Y +++ KTA +S L V+ + IA N R + Sbjct: 165 VDLLTSPEDSIDLNRFNYDKYYFIVRYKTA-FYSFYLPVALAMHQAGIATPDNLTRA--R 221 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + LG FQ+ DD LD G + +GK IG D + K Sbjct: 222 DVLIPLGEYFQVQDDYLDCYGNPDYIGK-IGTDILDNK 258 >gi|218195738|gb|EEC78165.1| hypothetical protein OsI_17735 [Oryza sativa Indica Group] Length = 165 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 16/108 (14%) Query: 140 LAEGELRQLSLSKNLDVTE-------------EDYLHVIKSKTAVLFSAALEVSS--LIA 184 +AEG Q SL + LD+ E Y ++K KTA +S L V++ L++ Sbjct: 2 VAEGIALQTSLGQMLDLISTHTGADDLAKYSIEGYRRIVKYKTAY-YSFYLPVANALLLS 60 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 G + LK + +GI FQ+ DD LD + N +GK + D G Sbjct: 61 GAKLEDFSGLKDILIEMGIYFQIQDDYLDCFADPNTIGKELCRDKEKG 108 >gi|302543684|ref|ZP_07296026.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302461302|gb|EFL24395.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length = 86 Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 L+D+E R SD E + + +Y + GK LRP+L + +A + + + A Sbjct: 19 LRDLES-------RWPSDGERVHRISRYALLPAGKLLRPLLLVESARAVGGGYEESLPAA 71 Query: 69 CAIEFIHTATLLHDD 83 +E++H +L+HDD Sbjct: 72 LGVEYLHAGSLVHDD 86 >gi|239612415|gb|EEQ89402.1| farnesyl pyrophosphate synthetase [Ajellomyces dermatitidis ER-3] gi|327355217|gb|EGE84074.1| farnesyl pyrophosphate synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 347 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 24/202 (11%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVI 122 L EF+ L+ DD++D S RRG+ W + +V + D F+L A +++ Sbjct: 80 LGWMTEFLQAFFLVSDDMMDSSITRRGEPC----WYRRPNVGMIAINDAFMLEAAIYVLL 135 Query: 123 ET--KSQEA-LEALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTA- 170 + +S A ++ L L + EL QL + N+D+ + + ++ KTA Sbjct: 136 KKHFRSHPAYVDFLELFHEVTFQTELGQLCDLLTAPEDNVDLNNFSMDKFNFIVIYKTAY 195 Query: 171 --VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 L + L +++RQA + LG FQ DD LD G+ ++GK IG D Sbjct: 196 YSFYLPVVLALHYLQLATPSNLRQA-HDILIPLGQYFQAQDDYLDVFGKPEQIGK-IGTD 253 Query: 229 FRNGKPTLPVILAFQRGTKREK 250 ++ K + V A +R + ++ Sbjct: 254 IQDNKCSWVVNQALKRCSAEQR 275 >gi|148673066|gb|EDL05013.1| mCG2750, isoform CRA_b [Mus musculus] Length = 390 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 14/158 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ S L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 149 LAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 208 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY-LHVIKSKT--------AVLFSAA 176 + + +E LS L G ++ S S + +D + K +T A AA Sbjct: 209 NTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGISTWKEQTFLSHCALLAKSCQAA 268 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +E++ A VQ+ Q YG ++ ++ ++ D+ + Sbjct: 269 MELAKHDAAVQDMAFQ----YGKHMAMSHKINADLQPF 302 >gi|164657195|ref|XP_001729724.1| hypothetical protein MGL_3268 [Malassezia globosa CBS 7966] gi|159103617|gb|EDP42510.1| hypothetical protein MGL_3268 [Malassezia globosa CBS 7966] Length = 200 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 2/139 (1%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 YL GK R L A + L+ + + + +H A+L+ DDV D S +RRG Sbjct: 49 YLEQLPGKEFRSKLLDAFRVWLDVPENALEQIKGMVRRLHNASLMMDDVEDQSEIRRGAP 108 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 +A V+G ++ +++ Q + + + + AL L L G+ +L ++++ Sbjct: 109 SAHEVFGIAQTINTANYVYFQVLADMAQLEPR-ALPELIHELGWLHRGQGMELYWREHVE 167 Query: 156 V-TEEDYLHVIKSKTAVLF 173 +EE Y+ ++ KT LF Sbjct: 168 CPSEEAYVDMVIHKTGGLF 186 >gi|269973905|ref|NP_001161761.1| decaprenyl-diphosphate synthase subunit 2 isoform 2 [Mus musculus] gi|74146194|dbj|BAE24234.1| unnamed protein product [Mus musculus] Length = 352 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 14/158 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ S L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 149 LAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 208 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY-LHVIKSKT--------AVLFSAA 176 + + +E LS L G ++ S S + +D + K +T A AA Sbjct: 209 NTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGISTWKEQTFLSHCALLAKSCQAA 268 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +E++ A VQ+ Q YG ++ ++ ++ D+ + Sbjct: 269 MELAKHDAAVQDMAFQ----YGKHMAMSHKINADLQPF 302 >gi|242054143|ref|XP_002456217.1| hypothetical protein SORBIDRAFT_03g032280 [Sorghum bicolor] gi|241928192|gb|EES01337.1| hypothetical protein SORBIDRAFT_03g032280 [Sorghum bicolor] Length = 356 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 35/212 (16%) Query: 65 VLLACA----IEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTSV 107 LAC IE++ L+ DD++D+S RRG+ V ++ N S Sbjct: 86 TFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISR 145 Query: 108 LVGDFLLSQAFCM-------VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 ++ + + + +E K+ + L L+ E +L + +L+ Sbjct: 146 ILQRHFKGKPYYVDLIDLFNEVEFKTASG-QLLDLITTHEGEKDLTKYNLTV-------- 196 Query: 161 YLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 + +++ KTA F + + L+AG +K+ + +G FQ+ DD LD G+ Sbjct: 197 HRRIVQYKTAYYSFYLPVACALLLAGENLDNFGDVKNILVEMGTYFQVQDDYLDCFGDPE 256 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +GK IG D + K + V+ A +R + +K+ Sbjct: 257 FIGK-IGTDIEDYKCSWLVVQALERADENQKS 287 >gi|300766617|ref|ZP_07076534.1| conserved hypothetical protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300495717|gb|EFK30868.1| conserved hypothetical protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 119 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 28/42 (66%) Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +G+A+Q++DDVLDY G+ K + D R+G +LP+I A Sbjct: 1 MGLAYQMLDDVLDYAGDEALTQKPVLNDLRDGVYSLPLIYAL 42 >gi|50539770|ref|NP_001002351.1| decaprenyl-diphosphate synthase subunit 2 [Danio rerio] gi|49904368|gb|AAH75908.1| Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Danio rerio] Length = 370 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 38/260 (14%) Query: 67 LACAIEFIHTATLLHDDVVD-------DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 LA E IHTA L+H +V+ D L+ + +GN+ +VL GDFLL+ A Sbjct: 123 LAEITELIHTAFLVHRGIVNLKEWTNSDGPLKD------MQFGNKMAVLSGDFLLANACT 176 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALE 178 + + + +E +S + +G + S S EED L V A L AL Sbjct: 177 GLAQLNDTKVVELISSAIGDVVQGIYHESSGS-----AEEDSLTVASWEDQAFLSHGALL 231 Query: 179 VSSLIAGV----QNSVRQALK-SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 S A + N+ Q L YG +L + +L ++ + +E G F Sbjct: 232 AKSCQAAMKLARHNTEAQNLAFQYGKHLALGHKLNSELQPFVKSGSE-----GAVFH--L 284 Query: 234 PTLPVILAFQR---GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290 + PV+ F R G +R + K N + ++ K +I E + +Y + Sbjct: 285 DSAPVV--FHRQIVGPERWQQQLKQAQNMSR-QIDYTKLRGLIKMERGVSQALDLCSY-H 340 Query: 291 GQKAKDSLRCLPDSSWKKSL 310 G KA ++++C P S + +L Sbjct: 341 GNKALEAMKCFPPSDARSAL 360 >gi|39545738|emb|CAE03415.3| OSJNBa0071I13.16 [Oryza sativa Japonica Group] Length = 434 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 17/131 (12%) Query: 118 FCMVIETKSQEALEA-----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL 172 F ++E S+ AL+ L L++ +L + S+ E Y ++K KTA Sbjct: 220 FLDILEIWSEIALQTSLGQMLDLISTHTGADDLAKYSI--------EGYRRIVKYKTAY- 270 Query: 173 FSAALEVSS--LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 +S L V++ L++G + LK + +GI FQ+ DD LD + N +GK IG D Sbjct: 271 YSFYLPVANALLLSGAKLEDFSGLKDILIEMGIYFQIQDDYLDCFADPNTIGK-IGTDIE 329 Query: 231 NGKPTLPVILA 241 + K + ++ A Sbjct: 330 DHKCSWLIVQA 340 >gi|70985182|ref|XP_748097.1| farnesyl-pyrophosphate synthetase [Aspergillus fumigatus Af293] gi|66845725|gb|EAL86059.1| farnesyl-pyrophosphate synthetase [Aspergillus fumigatus Af293] Length = 347 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 16/193 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET- 124 +L E + L+ DD++D S RRG+ G + F+L ++++ Sbjct: 79 ILGWLTELLQAFFLVSDDMMDSSITRRGQPCWYRHPGVGLIAINDAFMLESGIYVILKKH 138 Query: 125 -KSQEA-LEALSLVACTLAEGELRQL-----SLSKNLDV---TEEDYLHVIKSKTAVLFS 174 +S A ++ L L T + EL QL + +D+ + E Y+ ++ KTA +S Sbjct: 139 FRSHPAYVDFLELFHETTWQTELGQLCDLITAPEDKVDLDNFSMEKYMFIVTYKTAY-YS 197 Query: 175 AALEVSSLIAGVQNSVRQALKSYG---MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L V+ + ++ + + L+ + LG FQ+ DD LD G+ +GK IG D ++ Sbjct: 198 FYLPVALALLYLELATPENLQQTHDILIPLGQYFQVQDDYLDAYGDPAVIGK-IGTDIQD 256 Query: 232 GKPTLPVILAFQR 244 K + + A QR Sbjct: 257 NKCSWLINQALQR 269 >gi|300705868|ref|XP_002995273.1| hypothetical protein NCER_101910 [Nosema ceranae BRL01] gi|239604252|gb|EEQ81602.1| hypothetical protein NCER_101910 [Nosema ceranae BRL01] Length = 301 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 50/227 (22%), Positives = 94/227 (41%), Gaps = 24/227 (10%) Query: 27 VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL-------------ACAIEF 73 +++ D+VK+ F ++ +T T YR + L+ +C E Sbjct: 6 LKIYDDLVKFTDFCDLNKILSFITYNTVGGKGYRAELFNLIISDINSTELSLKTSCVYEL 65 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ--AFCMVIETKSQEALE 131 + +A ++ DDV+D+S +RRG V + +L+S + ++ +++ + Sbjct: 66 LQSAFIVADDVMDESLIRRG-VECYYRKKGLICLKYAQYLISALGKYLRMVRGENERSPL 124 Query: 132 ALSLVACTLAE--GELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQN 188 + C L G++ + + E Y +I+ KTA+ F L L +G + Sbjct: 125 RATYYNCILDTCLGQILDSKKKSKEEYSVELYNRIIEYKTAIYTFYLPLVSGYLFSGRKE 184 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 L Y +G+ FQ+ DD L++ E+ K G D K T Sbjct: 185 P--SCLYEYCKIIGMIFQMQDDYLNF---FPELSKKSGNDLEEKKLT 226 >gi|261202778|ref|XP_002628603.1| farnesyl pyrophosphate synthetase [Ajellomyces dermatitidis SLH14081] gi|239590700|gb|EEQ73281.1| farnesyl pyrophosphate synthetase [Ajellomyces dermatitidis SLH14081] Length = 347 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 24/202 (11%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVI 122 L EF+ L+ DD++D S RRG+ W + +V + D F+L A +++ Sbjct: 80 LGWMTEFLQAFFLVSDDMMDSSITRRGEPC----WYRRPNVGMIAINDAFMLEAAIYVLL 135 Query: 123 ET--KSQEA-LEALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTA- 170 + +S A ++ L L + EL QL + N+D+ + + ++ KTA Sbjct: 136 KKHFRSHPAYVDFLELFHEVTFQTELGQLCDLLTAPEYNVDLNNFSMDKFNFIVIYKTAY 195 Query: 171 --VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 L + L +++RQA + LG FQ DD LD G+ ++GK IG D Sbjct: 196 YSFYLPVVLALHYLQLATPSNLRQA-HDILIPLGQYFQAQDDYLDVFGKPEQIGK-IGTD 253 Query: 229 FRNGKPTLPVILAFQRGTKREK 250 ++ K + V A +R + ++ Sbjct: 254 IQDNKCSWVVNQALKRCSAEQR 275 >gi|220675926|emb|CAX12085.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Danio rerio] gi|220679659|emb|CAX12978.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Danio rerio] Length = 370 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 38/260 (14%) Query: 67 LACAIEFIHTATLLHDDVVD-------DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 LA E IHTA L+H +V+ D L+ + +GN+ +VL GDFLL+ A Sbjct: 123 LAEITELIHTAFLVHRGIVNLKEWTNSDGPLKD------MQFGNKMAVLSGDFLLANACT 176 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK-SKTAVLFSAALE 178 + + + +E +S + +G + S S EED L V A L AL Sbjct: 177 GLAQLNDTKVVELISSAIGDVVQGIYHESSGS-----AEEDSLTVASWEDQAFLSHGALL 231 Query: 179 VSSLIAGV----QNSVRQALK-SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 S A + N+ Q L YG +L + +L ++ + +E G F Sbjct: 232 AKSCQAAMKLARHNTEAQNLAFQYGKHLALGHKLNSELQPFVKSGSE-----GAVFHFD- 285 Query: 234 PTLPVILAFQR---GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290 + PV+ F R G +R + K N + ++ K +I E + +Y + Sbjct: 286 -SAPVV--FHRQIVGPERWQQQLKQAQNMSR-QIDYTKLRGLIKMERGVSQALDLCSY-H 340 Query: 291 GQKAKDSLRCLPDSSWKKSL 310 G KA ++++C P S + +L Sbjct: 341 GNKALEAMKCFPPSDARSAL 360 >gi|154337619|ref|XP_001565042.1| farnesyl pyrophosphate synthase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062082|emb|CAM45189.1| farnesyl pyrophosphate synthase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 362 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 26/188 (13%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS---- 126 IE + L+ DD++D+S RRG+ L G T V + D L+ A+ + Sbjct: 87 IEMLQAHFLVEDDIMDNSKTRRGRPCWYLHPGVTTQVAINDGLILLAWATQVALHYFADR 146 Query: 127 ---QEALEALSLVACTLAEGELRQLS-------LSKN---------LDVTEEDYLHVIKS 167 E L V T G+L ++ L N ++ T ++ ++ Sbjct: 147 PFLAEVLRVFHDVDFTTTIGQLYDVTSMVDSAKLDANVAHANTTDYVEYTPFNHRRIVVY 206 Query: 168 KTAVL-FSAALEVSSLIAGVQNSV-RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 KTA + L + L++G V ++ M +G FQ+ DDV+D ++GK I Sbjct: 207 KTAYYTYWLPLVMGLLVSGTAEKVDKEVTHKVSMVMGEYFQVQDDVMDCFTSPEKLGK-I 265 Query: 226 GEDFRNGK 233 G D + K Sbjct: 266 GTDIEDAK 273 >gi|149723076|ref|XP_001504011.1| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 2 [Equus caballus] Length = 400 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 61/270 (22%), Positives = 119/270 (44%), Gaps = 31/270 (11%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYLHVIKSKT--------AVLFSAA 176 + + +E L+ L +G + S S K +T++ + K +T A AA Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSAKENYITDDIGISTWKEQTFLSHGALLAKSCQAA 267 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +E++ A VQ+ Q YG ++ ++ ++ D+ + + E + N P Sbjct: 268 MELAKHGAEVQDMAFQ----YGKHMAMSHKINSDLQPF---IKEKTSDSTTFHLNSAP-- 318 Query: 237 PVILAFQRGTKREKNFWKSTIND----GKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292 ++ Q R+ W I + G++ L++ + + +D +G Sbjct: 319 --VVLHQEFLGRD--LWIKQIGEAQEKGRLDYAKLRETIKAGKGVTSAIDL---CRYHGN 371 Query: 293 KAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 KA ++L P S + +L +V F + R + Sbjct: 372 KALEALESFPPSEARSALENIV-FAVTRFS 400 >gi|18478922|gb|AAL73358.1|AF386103_1 farnesyl diphosphate synthase precursor [Trypanosoma cruzi] Length = 316 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 38/194 (19%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI-------- 122 IEF+ L+ DD++D S +RRGK G T + D ++ +++ ++ Sbjct: 41 IEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGVTTQCAINDGIILKSWTQIMAWHYFADR 100 Query: 123 ---------------ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 T + + S+ + E+ Q + + T Y ++K Sbjct: 101 PFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNKLDPEVAQPMTTDFAEFTPAIYKRIVKY 160 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNL--------GIAFQLVDDVLDYRGEVN 219 KT ++ L L+ G+ V +A S MNL G FQ+ DDV+D Sbjct: 161 KT-TFYTYLL---PLVMGL--FVSEAAASVEMNLVERVAHLIGEYFQVQDDVMDCFTPPE 214 Query: 220 EMGKNIGEDFRNGK 233 ++GK +G D + K Sbjct: 215 QLGK-VGTDIEDAK 227 >gi|148673065|gb|EDL05012.1| mCG2750, isoform CRA_a [Mus musculus] Length = 253 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 14/158 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ S L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 12 LAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 71 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY-LHVIKSKT--------AVLFSAA 176 + + +E LS L G ++ S S + +D + K +T A AA Sbjct: 72 NTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGISTWKEQTFLSHCALLAKSCQAA 131 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY 214 +E++ A VQ+ Q YG ++ ++ ++ D+ + Sbjct: 132 MELAKHDAAVQDMAFQ----YGKHMAMSHKINADLQPF 165 >gi|209408510|emb|CAR64517.1| geranyltranstransferase [Gilbertella persicaria] Length = 350 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 26/220 (11%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDN--------HVLLACAIEFIHTATLLHDDVVDD 87 Y GGK R + + T +L +G++ +L +EF+ L+ DD++D Sbjct: 46 YYNVPGGKLNRGISVVDTVRIL--KGESVTEDDIFKATVLGWLVEFLQAFFLVSDDIMDA 103 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACTLAEGE 144 S RRG+ G + F+L + ++ K+ +E + L + E Sbjct: 104 SITRRGQPCWYKADGVGMVAINDAFILEACIYIFLKKYFKKTDYYIELVELFQEVTFQTE 163 Query: 145 LRQL-----SLSKNLDVTE---EDYLHVIKSKTAVL-FSAALEVSSLIAGVQN--SVRQA 193 L QL + N+D+++ + + ++ KTA F + ++ + GV+N + +QA Sbjct: 164 LGQLCDLITAPEDNVDLSKFSVKKHQFIVIYKTAYYSFYLPVALAMHMVGVKNEEAFKQA 223 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + LG FQ+ DD LD G +GK IG D + K Sbjct: 224 -HDILIPLGEYFQVQDDYLDCYGAPEVIGK-IGTDIMDNK 261 >gi|159125980|gb|EDP51096.1| farnesyl-pyrophosphate synthetase [Aspergillus fumigatus A1163] Length = 347 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 16/193 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET- 124 +L E + L+ DD++D S RRG+ G + F+L ++++ Sbjct: 79 ILGWLTELLQAFFLVSDDMMDSSITRRGQPCWYRHPGVGLIAINDAFMLESGIYVILKKH 138 Query: 125 -KSQEA-LEALSLVACTLAEGELRQL-----SLSKNLDV---TEEDYLHVIKSKTAVLFS 174 +S A ++ L L T + EL QL + +D+ + E Y+ ++ KTA +S Sbjct: 139 FRSHPAYVDFLELFHETTWQTELGQLCDLITAPEDKVDLDNFSMEKYMFIVTYKTAY-YS 197 Query: 175 AALEVSSLIAGVQNSVRQALKSYG---MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L V+ + ++ + + L+ + LG FQ+ DD LD G+ +GK IG D ++ Sbjct: 198 FYLPVALALLYLELATPENLQQTHDILIPLGQYFQVQDDYLDAYGDPAVIGK-IGTDIQD 256 Query: 232 GKPTLPVILAFQR 244 K + + A QR Sbjct: 257 NKCSWLINQALQR 269 >gi|285013665|gb|ADC32809.1| farnesyl pyrophosphate synthase [Medicago sativa] Length = 342 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 37/262 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR---LVWGNQTSVLVGDF 112 L IE++ L+ DD++D+S RRG+ +AA L+ + +L F Sbjct: 78 LGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILRKHF 137 Query: 113 LLSQAFCMVI----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 + ++ E + Q A + + L+ E +L + +LS LH ++ Sbjct: 138 KGKPYYVELLDLFNEVEFQTAAGQMIDLITTLEGEKDLSKYTLS----------LHRRIV 187 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + L+AG +K+ + +G FQ+ DD LD G+ +GK Sbjct: 188 QYKTAYYSFYLPVACALLMAGEDLDNHVDVKNILVEMGTYFQVQDDYLDCFGDPETIGK- 246 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDT 283 IG D + K + V+ A + + +K N GK N+ + E N Sbjct: 247 IGTDIEDFKCSWVVVKALELCNEEQKKVLHE--NYGKPDPANVAIVKTLYNELNLEGAFA 304 Query: 284 EYRAYSYGQKAKDSLRCLPDSS 305 EY + SY +K S+ P S+ Sbjct: 305 EYESASY-EKLVTSIEAHPSSA 325 >gi|332667156|ref|YP_004449944.1| hypothetical protein Halhy_5245 [Haliscomenobacter hydrossis DSM 1100] gi|332335970|gb|AEE53071.1| hypothetical protein Halhy_5245 [Haliscomenobacter hydrossis DSM 1100] Length = 405 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 12/103 (11%) Query: 159 EDYLHVIKSKTAVLFSAALEVSSLIAG-VQNSVRQALKSYGMNLGIAFQLVDDVLD--YR 215 E Y I F +EV I G ++N +LK + + G Q+++D D Y Sbjct: 227 EAYFRRIYCSNVYFFRCIVEVLEQIGGKIENEYVNSLKLFSIQYGFMLQIINDYADFAYS 286 Query: 216 GEVNE------MGK---NIGEDFRNGKPTLPVILAFQRGTKRE 249 + NE GK + D N TLP+I Q G KR+ Sbjct: 287 DDANERSMLKLAGKKSTDFFADLYNFNITLPLIFHLQEGYKRK 329 >gi|239609673|gb|EEQ86660.1| geranylgeranyl pyrophosphate synthase [Ajellomyces dermatitidis ER-3] Length = 702 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 38/194 (19%), Positives = 82/194 (42%), Gaps = 16/194 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 ++ A ++ L+ DDV D S RRG AA +++G ++ ++ + F ++ + K Sbjct: 444 VIETAAMMVYHNLLMVDDVQDGSQTRRGMPAAYILYGTNQTMNSATYVWVKIFELMAQLK 503 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTE---------EDYLHVIKSKTAVLFSAA 176 +A + + EL+ L L ++L++ DY ++ +K+ F Sbjct: 504 FADACRDILI-------DELKSLGLGQSLELHWRFHKLCPPISDYFVMVDNKSGSFFQLV 556 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + + S +G + L + LG +Q+ +D + K +D GK ++ Sbjct: 557 MRLMSAESGNPAAPDTKLSHFINLLGRYYQIWNDYQNLESSEYMAMKGFCDDLSEGKLSI 616 Query: 237 PVILAFQRGTKREK 250 +I Q +++ Sbjct: 617 ILIHTLQNSVAKDR 630 >gi|221108268|ref|XP_002165073.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase, subunit 2 [Hydra magnipapillata] Length = 376 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 18/206 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAAR--LVWGNQTSVLVGDFLLSQAFCMVIE 123 +LA E I+ A L+H +++ L+ + ++ L +GN+ SVL GDFLL++A + + Sbjct: 128 ILAETCEMINIAFLVHGCIINLDKLQYLETLSKKSLEFGNKLSVLGGDFLLAKASVELAK 187 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNL---DVTEEDYLHVIKSKTAVLFSAALEVS 180 + +E +S AEG + ++ + V E + +H +++ ++L + + + + Sbjct: 188 LSNTYVVELISQAIGDSAEGNVLDDFCAEQICKWSVKEWE-VHTFQTRGSLL-ANSCKSA 245 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G Q A +G L +A Q +DV ++ + + KPT +I+ Sbjct: 246 LVLVGHQEQHMDAAFEFGRYLSVAVQCAEDVRAFQNSKSIL-----------KPTNIIII 294 Query: 241 AFQRGTKREKNFWKSTINDGKISVEN 266 ++ K ++ S I + I+ N Sbjct: 295 LALLQNEKTKIYYNSYIKNMNIASSN 320 >gi|295660371|ref|XP_002790742.1| farnesyl pyrophosphate synthetase [Paracoccidioides brasiliensis Pb01] gi|226281295|gb|EEH36861.1| farnesyl pyrophosphate synthetase [Paracoccidioides brasiliensis Pb01] Length = 346 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 95/230 (41%), Gaps = 21/230 (9%) Query: 40 SGGKRLRPMLTLATAL-MLEYRGDNHVLLACAI----EFIHTATLLHDDVVDDSALRRGK 94 GGK R + T L +L D C + E + L+ DD++D S RRGK Sbjct: 47 PGGKLNRGLSVPDTGLALLGKLSDEQFKHLCTLGWLTELLQAFFLVSDDMMDGSHTRRGK 106 Query: 95 VAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ------EALEALSLVACTLAEGELRQL 148 G + F+L + ++++ + + LE V+ G+L L Sbjct: 107 PCWHRRPGVNLIAINDSFMLESSIYVILKKHFRFHPAYVDFLELFHEVSFQTELGQLCDL 166 Query: 149 SLSK----NLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ----NSVRQALKSYGMN 200 + NLD D + I +S L V+ + +Q ++RQA + Sbjct: 167 LTAPEDNVNLDNFNMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPGNLRQA-HDILIP 225 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 LG FQ DD LD G+ ++GK +G D ++ K + + A +R + ++ Sbjct: 226 LGQYFQAQDDYLDVFGKPEQIGK-VGTDIQDNKCSWVINQALKRCSPEQR 274 >gi|170779365|gb|ACB37020.1| farnesyl-diphosphate synthase [Ganoderma lucidum] gi|170779367|gb|ACB37021.1| farnesyl-diphosphate synthase [Ganoderma lucidum] Length = 360 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 17/201 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LL +EF+ L+ DD++D S RRG+ V G + F+L A +++ Sbjct: 81 LLGWCVEFLQAFFLVSDDMMDQSVTRRGQPCWFRVEGINLIAINDSFMLEGAIYYLLKKH 140 Query: 126 SQEA---LEALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTAVL-F 173 + + L L T + E+ QL + ++D+++ + ++ KTA F Sbjct: 141 FRSEPYYVHLLELFHDTTFQTEIGQLIDLITAPEDHVDLSKFSLAKHQKIVIYKTAYYSF 200 Query: 174 SAALEVSSLIAGVQ----NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 + ++ GV N +S + LG FQ+ DD LD+ +GK +G D Sbjct: 201 YLPVALAMYTCGVPHAPANDPYALAQSILIPLGEYFQVQDDFLDFAAPPEVLGK-VGTDI 259 Query: 230 RNGKPTLPVILAFQRGTKREK 250 + K + V A R + ++ Sbjct: 260 VDNKCSWCVNAALARASPAQR 280 >gi|327356194|gb|EGE85051.1| hypothetical protein BDDG_07996 [Ajellomyces dermatitidis ATCC 18188] Length = 702 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 38/194 (19%), Positives = 82/194 (42%), Gaps = 16/194 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 ++ A ++ L+ DDV D S RRG AA +++G ++ ++ + F ++ + K Sbjct: 444 VIETAAMMVYHNLLMVDDVQDGSQTRRGMPAAYILYGTNQTMNSATYVWVKIFELMAQLK 503 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTE---------EDYLHVIKSKTAVLFSAA 176 +A + + EL+ L L ++L++ DY ++ +K+ F Sbjct: 504 FADACRDILI-------DELKSLGLGQSLELHWRFHKLCPPISDYFVMVDNKSGSFFQLV 556 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + + S +G + L + LG +Q+ +D + K +D GK ++ Sbjct: 557 MRLMSAESGNPAAPDTKLSHFINLLGRYYQIWNDYQNLESSEYMAMKGFCDDLSEGKLSI 616 Query: 237 PVILAFQRGTKREK 250 +I Q +++ Sbjct: 617 ILIHTLQNSVAKDR 630 >gi|219849930|ref|YP_002464363.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485] gi|219544189|gb|ACL25927.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485] Length = 305 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Query: 21 KRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 +R + +I V +LI + RLR +L LA A + G++ A A+E I AT Sbjct: 22 ERTRARATVISMVNPHLIANPTDRLRALLVLAVARLGGATGEHVAHAAAAVELIEAATRA 81 Query: 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 H++++D+ A R G+V W + +++VGD+L + A Sbjct: 82 HNNLIDEQARRLGRV-KNGAWDHGVALMVGDYLFALA 117 >gi|76800323|ref|ZP_00782013.1| polyprenyl synthetase family protein [Streptococcus agalactiae 18RS21] gi|76584478|gb|EAO61393.1| polyprenyl synthetase family protein [Streptococcus agalactiae 18RS21] Length = 111 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 5/108 (4%) Query: 214 YRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK-ISVENLKKAFI 272 Y + K + ED G +LP++LA + + +K ++ ++ E+++K Sbjct: 6 YTADKKTFNKPVLEDLAQGIYSLPLLLAIEENP----DIFKPILDKKTDMATEDMEKIAY 61 Query: 273 IMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++ +R + + A + +KA + LP SS KK L+++ ++ L+R Sbjct: 62 LVVSHRGVDKARHLARKFTEKAISDINKLPQSSAKKQLLQLTNYLLKR 109 >gi|221110878|ref|XP_002156194.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase, subunit 2 [Hydra magnipapillata] Length = 376 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 18/206 (8%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAAR--LVWGNQTSVLVGDFLLSQAFCMVIE 123 +LA E I+ A L+H +++ L+ + ++ L +GN+ SVL GDFLL++A + + Sbjct: 128 ILAETCEMINIAFLVHGCIINLDKLQYLETLSKKSLEFGNKLSVLGGDFLLAKASVELAK 187 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNL---DVTEEDYLHVIKSKTAVLFSAALEVS 180 + +E +S AEG + ++ + V E + +H +++ ++L + + + + Sbjct: 188 LSNTYVVELISQAIGDSAEGNVLDDFCAEQICKWSVKEWE-VHTFQTRGSLL-ANSCKSA 245 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G Q A +G L +A Q +DV ++ + + KPT +I+ Sbjct: 246 LVLVGHQEQHMDAAFEFGRYLSVAVQCAEDVRAFQNSKSIL-----------KPTNIIII 294 Query: 241 AFQRGTKREKNFWKSTINDGKISVEN 266 ++ K ++ S I + I+ N Sbjct: 295 LALLQNEKTKIYYNSYIKNMNIASSN 320 >gi|114566220|ref|YP_753374.1| hypothetical protein Swol_0676 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337155|gb|ABI68003.1| hypothetical protein Swol_0676 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 252 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 18/106 (16%), Positives = 58/106 (54%), Gaps = 7/106 (6%) Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163 Q ++L+GD++ + +++E + + + +++ + EG++ + + L +D Sbjct: 101 QFAILIGDYMFGRMLKLLVEAGADKLVGLFAVMMAEINEGQV----MERKLQAAHKD--- 153 Query: 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVD 209 V++ +++ A E + ++G++ + + + G+NLG++ +L++ Sbjct: 154 VLQKTRGSIYATAFETAGHLSGMKGILLENCRQLGLNLGMSIELMN 199 >gi|151415019|gb|ABS11699.1| farnesyl diphosphate synthase [Matricaria chamomilla var. recutita] Length = 343 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 40/256 (15%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-----------VAAR---LVWGN 103 D+ + L+ A IE++ L+ D++D+S RRG+ +AA L+ + Sbjct: 70 DDEIFLSSALGWCIEWLQAYFLVLGDIMDESHTRRGQPCWFRLPKVGMIAANDGILLRNH 129 Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTE 158 +L F + +++ ++ + S L+ + E +L + SLS Sbjct: 130 VPRILKNHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSV------ 183 Query: 159 EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + +++ KTA F + + L+ G +K+ + +G FQ+ DD LD G Sbjct: 184 --HRRIVQYKTAYYSFYLPVAXALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDCFGT 241 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK---ISVENLKKAFIIM 274 +GK IG D + K + V+ A + + +K F N GK SV +K+ + + Sbjct: 242 PEVIGK-IGTDIEDFKCSWLVVKALELANEEQKKFLHE--NYGKKDPASVAKVKELYHTL 298 Query: 275 RENRALVDTEYRAYSY 290 N V +Y A SY Sbjct: 299 --NLQAVFEDYEATSY 312 >gi|4324960|gb|AAD17204.1| farnesyl diphosphate synthase [Artemisia annua] Length = 343 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 40/256 (15%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-----------VAAR---LVWGN 103 D+ + L+ A IE++ L+ DD++D+S RRG+ +AA L+ + Sbjct: 70 DDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLLKVGMIAANDGILLRNH 129 Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTE 158 +L F + +++ ++ + S L+ + E +L + SLS Sbjct: 130 VPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSI------ 183 Query: 159 EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + +++ KTA F + + L+ G +K+ + +G FQ+ DD LD G Sbjct: 184 --HRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQDDYLDCFGA 241 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK---ISVENLKKAFIIM 274 +GK IG D + K + V+ A + + +K N GK SV +K+ + + Sbjct: 242 PEVIGK-IGTDIEDFKCSWLVVKALELANEEQKKVLHE--NYGKKDPASVAKVKEVYHTL 298 Query: 275 RENRALVDTEYRAYSY 290 N V +Y A SY Sbjct: 299 --NLQAVFEDYEATSY 312 >gi|302909459|ref|XP_003050078.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731015|gb|EEU44365.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 347 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 24/185 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVI 122 L E + L+ DD++D S RRG+ W Q V + D F+L A ++ Sbjct: 80 LGWMTELLQAFFLVSDDIMDSSITRRGQPC----WYRQEGVGMIAINDAFMLEAAIYTLL 135 Query: 123 ET--KSQEA-LEALSLVACTLAEGELRQLS--LSKNLDVTE------EDYLHVIKSKTA- 170 + +S A ++ + L T + EL QL L+ D + E Y ++ KTA Sbjct: 136 KKYFRSHPAYVDLIELFHETTFQTELGQLCDLLTAPEDKVDLDNFSMEKYSFIVIYKTAY 195 Query: 171 --VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 AL + L +++QA + + LG FQ+ DD LD G +GK IG D Sbjct: 196 YSFYLPVALALHQLNLATPKNLKQA-EDILIPLGEYFQIQDDYLDNFGLPEHIGK-IGTD 253 Query: 229 FRNGK 233 ++ K Sbjct: 254 IKDNK 258 >gi|2935459|gb|AAC73051.1| farnesyl pyrophosphate synthase [Solanum lycopersicum] Length = 342 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 33/206 (16%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTSVLVGDFL 113 L IE++ L+ DD++D S RRG+ + ++ N + ++ + Sbjct: 78 LGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWYNLEKVGMIAINDGILLRNHITRILKKYF 137 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 +++ + + E + Q A + + L+ + E +L + SLS +H ++ Sbjct: 138 RPESYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLS----------IHRRIV 187 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + L+ G +K +++GI FQ+ DD LD + +GK Sbjct: 188 QYKTAYYSFYLPVACALLMVGENLDKHVDVKKILIDMGIYFQVQDDYLDCFADPEVLGK- 246 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREK 250 IG D ++ K + V+ A + + +K Sbjct: 247 IGTDIQDFKCSWLVVKALELCNEEQK 272 >gi|21955860|emb|CAD42869.1| farnesyl pyrophosphate synthase [Mucor circinelloides f. lusitanicus] Length = 352 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 28/221 (12%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGD--------NHVLLACAIEFIHTATLLHDDVVDD 87 Y GGK R + + T +L +GD +L IEF+ L+ DD++D Sbjct: 48 YYNVPGGKLNRGISVVDTVRIL--KGDAVTEDDIFKATVLGWLIEFLQAFFLVSDDIMDA 105 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE---TKSQEALEALSLVACTLAEGE 144 S RRG+ G + F+L + ++ K+ +E + L + E Sbjct: 106 SITRRGQPCWYKSEGVGMVAINDAFILESCIYIFLKKYFKKTDYYIELVELFHEVTFQTE 165 Query: 145 LRQL-----SLSKNLDVTE---EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALK 195 L QL + ++D+++ + + ++ KTA F + ++ + G++N +A K Sbjct: 166 LGQLCDLITAPEDDVDLSKFSIKKHQFIVIYKTAYYSFYLPVALAMHMVGIKN--EEAFK 223 Query: 196 SYG---MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + LG FQ+ DD LD G +GK IG D + K Sbjct: 224 QSHDILIPLGEYFQVQDDYLDCYGAPEVIGK-IGTDIMDNK 263 >gi|50744624|ref|XP_419804.1| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Gallus gallus] Length = 379 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 24/259 (9%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ L+ + + +GN+ +VL GDFLL+ A + + + Sbjct: 127 LAEITELIHTAFLVHRGIVNIGELKSCDGPLKDMQFGNKMAVLSGDFLLANACTSLAQLQ 186 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK-----SKTAVL---FSAAL 177 + + +E +S L +G + S S +T++ + K S +A+L AA+ Sbjct: 187 NTKVVELISSAIGDLVQGIYYENSRSSENCLTDDIGISTWKEQVFLSHSALLAKSCQAAM 246 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 E++ A +Q+ + YG ++ ++ +L D+ + V E + N P Sbjct: 247 ELAKHSAEMQDMAFR----YGKHMSMSHKLHSDLQPF---VKESSSDAMAFSLNCAPA-- 297 Query: 238 VILAFQRGTKREKNFWKSTIND--GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 + Q R+ W I + GK ++ + KK ++ + + +G +A Sbjct: 298 --VLHQEFLGRDA--WIKQIREAQGKGNLMDYKKLQEAIKAGKGVTSAIDLCRCHGNRAL 353 Query: 296 DSLRCLPDSSWKKSLMEVV 314 +L P S + +L +V Sbjct: 354 AALESFPPSEARAALANIV 372 >gi|289619215|emb|CBI54483.1| unnamed protein product [Sordaria macrospora] Length = 347 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 16/181 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-- 124 L E + L+ DD++D S RRGK L G + F+L A +++ Sbjct: 80 LGWMTELLQAFFLVSDDIMDSSITRRGKPCWYLQEGVGMVAINDAFMLESAIYTLLKKYF 139 Query: 125 KSQ----EALEALSLVACTLAEGELRQLSLSK----NLD-VTEEDYLHVIKSKTA---VL 172 KS + LE V G+L L + +LD + + Y ++ KTA Sbjct: 140 KSHPRYVDFLELFHEVTFQTEMGQLCDLLTAPEDKVDLDNFSMDKYTFIVIYKTAYYSFY 199 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 AL + L +++QA + + LG FQ+ DD LD G +GK IG D ++ Sbjct: 200 LPVALAMYMLDIATPENLKQA-EDILIPLGEYFQVQDDYLDNFGRPEHIGK-IGTDIQDN 257 Query: 233 K 233 K Sbjct: 258 K 258 >gi|330923188|ref|XP_003300141.1| hypothetical protein PTT_11298 [Pyrenophora teres f. teres 0-1] gi|311325882|gb|EFQ91767.1| hypothetical protein PTT_11298 [Pyrenophora teres f. teres 0-1] Length = 347 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 66/274 (24%), Positives = 112/274 (40%), Gaps = 33/274 (12%) Query: 8 TLKDMEKVNFLI---LKRICSDVEMIPDVVKYLIFS------GGKRLRPMLTLATALMLE 58 TLKD E V I L+ C ++ + + + S GGK R M + T +L+ Sbjct: 4 TLKDFESVWPRIVADLQDHCKGYKLPQNCLDWFTKSLEYNTIGGKCNRGMSVVDTTSILQ 63 Query: 59 YR----GDNH----VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110 + G LL IEF+ L+ DD++D S RRG L L Sbjct: 64 NKTLKPGSEEYFRAALLGWMIEFLQAFFLVSDDIMDSSKTRRGNPCWYLAPKVGMIALND 123 Query: 111 DFLLSQAFCMVIETKSQE------ALEALSLVACTLAEGELRQLSLSKNLDV-----TEE 159 F+L + ++++ ++ +E V G+L L + DV + E Sbjct: 124 SFMLEASIYILLKKHFRQDKSYIDMVELFQEVTFQTECGQLCDLITAPEDDVDLDKFSLE 183 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG---MNLGIAFQLVDDVLDYRG 216 + ++ KTA +S L V+ + + + LK+ + +G FQ DD LD Sbjct: 184 KFTFIVIYKTAY-YSFYLPVALALYYTGAATPKNLKTAEDILIPMGEYFQAQDDYLDAFA 242 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +GK IG D + K + + A ++ T ++ Sbjct: 243 DPKVLGK-IGTDIMDNKCSWLINQALKKVTPEQR 275 >gi|170115769|ref|XP_001889078.1| predicted protein [Laccaria bicolor S238N-H82] gi|164636026|gb|EDR00326.1| predicted protein [Laccaria bicolor S238N-H82] Length = 363 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 28/218 (12%) Query: 40 SGGKRLRPMLTLATALMLEYRG---DNH---VLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R M + T +L+ R D + +L IE + L+ DD++D S RR Sbjct: 48 PGGKLNRGMSVVDTVEILKGRALDEDEYFKAAVLGWCIELLQAYFLVADDIMDSSITRRA 107 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ-EALEA--LSLVACTLAEGELRQLSL 150 + + T + F+L A +++T + +A A L L T + E+ QL Sbjct: 108 QPCWYRLPSVGTVAINDSFMLEAAIYRLLKTHFRGQAYYADLLDLFHETTYQTEMGQLV- 166 Query: 151 SKNLDVTEEDYL----------HVIKSKTAVLFSAALEVS-----SLIAGVQNSVRQALK 195 +L ED + H I +S L V+ S I + K Sbjct: 167 --DLITAPEDKVDLSKFSLARHHTIVIYKTAYYSFYLPVACAMLFSNIPSSDEHIYAHAK 224 Query: 196 SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 S + LG FQ+ DD LDY +GK IG D + K Sbjct: 225 SILLPLGEYFQIQDDFLDYSATPEVLGK-IGTDIVDNK 261 >gi|328793320|ref|XP_001123325.2| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera] Length = 332 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%) Query: 159 EDYLHVIKSKTAVL-FSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRG 216 + Y H+IK KT+ F ++ AG+ + + + + + FQ+ +D L+Y Sbjct: 165 DQYNHLIKHKTSYFSFILPFSLAMRFAGIIDLEMHREAEKILTKISHLFQVQNDFLNYYS 224 Query: 217 EVNEMGKN-IGEDFRNGKPTLPVILAFQRGTKREKNFWK 254 + GK+ I D + GK T P+++A +R T +K K Sbjct: 225 KEEIEGKSGIQTDIQKGKCTWPIVIALERATAEQKRILK 263 >gi|291585672|gb|ADE18770.1| farnesyl-diphosphate synthase [Glycyrrhiza uralensis] gi|291585674|gb|ADE18771.1| farnesyl-diphosphate synthase [Glycyrrhiza uralensis] Length = 342 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 44/293 (15%) Query: 40 SGGKRLRPMLTLATALML---EYRGDNHVLLACA----IEFIHTATLLHDDVVDDSALRR 92 GGK R + + + +L + D+ + LA A IE++ L+ DD++D+S RR Sbjct: 44 PGGKLNRGLSVIDSYRLLKEGQALNDDELFLASALGWCIEWLQAYFLVLDDIMDNSHTRR 103 Query: 93 GK-----------VAAR---LVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS---- 134 G+ +AA L+ + +L F + +++ ++ + S Sbjct: 104 GQPCWFRVPKVGMIAANDGVLLRNHIPRILRKHFRGKPYYVDLLDLFNEVEFQTASGQMI 163 Query: 135 -LVACTLAEGELRQLSLSKNLDVTEEDYLH--VIKSKTAVL-FSAALEVSSLIAGVQNSV 190 L+ E +L + +LS LH +++ KTA F + + L+ G Sbjct: 164 DLITTLEGEKDLSKYTLS----------LHRRIVQYKTAYYSFYLPVACALLMMGENLDN 213 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +K+ +++G FQ+ DD LD G+ +GK IG D + K + V+ A + + +K Sbjct: 214 HIDVKNILVDMGTYFQVQDDYLDCFGDPQTIGK-IGTDIEDFKCSWLVVKALELCNEEQK 272 Query: 251 NFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSYGQKAKDSLRCLP 302 GK N+ K + E N V EY + SY +K S+ P Sbjct: 273 KVLYEHY--GKPDPTNVAKVKALYNELNLQGVFAEYESASY-EKLVTSIEAHP 322 >gi|45190485|ref|NP_984739.1| AEL122Wp [Ashbya gossypii ATCC 10895] gi|44983427|gb|AAS52563.1| AEL122Wp [Ashbya gossypii ATCC 10895] Length = 351 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 36/223 (16%) Query: 40 SGGKRLRPMLTLATALML------------EYRGDNHVLLACAIEFIHTATLLHDDVVDD 87 GGK R + + T ++L EYR LL +E + L+ DD++D Sbjct: 47 PGGKLNRGLSVVDTYVILKNCKSPLDLPVDEYR--RVALLGWCVELLQAYFLVADDMMDK 104 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQA-FCMVIETKSQEA-----LEALSLVACTLA 141 S RRG+ V + F+L A +C++ + LE L V Sbjct: 105 SITRRGQPCWYRVEEVGDMAINDAFMLEAAIYCLLKRNFRDQPYYVDLLELLHDVTFQTE 164 Query: 142 EGELRQLSLSKNLDV-----TEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQN-----SV 190 G+L L + V + + + +++ KTA F + ++ AGV + Sbjct: 165 VGQLLDLMTAPEFIVDLNKFSLQRHSYIVIFKTAYYSFYLPVALAMYAAGVNDERDFAQA 224 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 R+ L + LG FQ+ DD LD G ++GK IG D ++ K Sbjct: 225 REVL----LPLGEYFQIQDDYLDCFGRPEDIGK-IGTDIQDNK 262 >gi|226945451|ref|YP_002800524.1| geranylgeranyl pyrophosphate synthase protein [Azotobacter vinelandii DJ] gi|226720378|gb|ACO79549.1| geranylgeranyl pyrophosphate synthase protein [Azotobacter vinelandii DJ] Length = 322 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 20/186 (10%) Query: 140 LAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 +A G+L ++ + V E V++ KT + +++ AG +A +YG Sbjct: 145 IAAGQLADIAATTGQAVAREGIEEVVRMKTGERRALYAALAAQHAGATPEQVEAYAAYGR 204 Query: 200 NLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR--GTKRE--KNFWKS 255 LGIA QL D+ D G D +G TLP+ L +R G+ RE ++ + Sbjct: 205 ALGIARQLRSDLQDL------FGPRPSRDLSSGTATLPIALLLERTDGSAREEIQDLLRQ 258 Query: 256 TINDGKI--SVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 +++ + S+ ++F ++R+ +++ R +A + L S ++S M + Sbjct: 259 AMHNTSVHASIRAHLRSFGVLRDVVKMIEANCR------RALAQIEALCPS--QRSAMHL 310 Query: 314 VDFCLQ 319 +F L+ Sbjct: 311 REFVLR 316 >gi|284051047|ref|ZP_06381257.1| Polyprenyl synthetase [Arthrospira platensis str. Paraca] Length = 81 Score = 39.7 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 27/51 (52%) Query: 202 GIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 G+AFQ+VDD+LD ++GK G+D K T P + ++ + + Sbjct: 1 GLAFQIVDDILDITAPSEQLGKTAGKDLEAQKATYPSLWGLEKSRAKAEQL 51 >gi|255988559|gb|ACU51163.1| farnesyl pyrophosphate synthase [Nicotiana tabacum] Length = 234 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 33/206 (16%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVA--------------ARLVWGNQTSVLVGDF 112 L IE++ L+ DD++D+S RRG+ L+ + T +L F Sbjct: 5 LGWRIEWLQAYFLVLDDIMDNSHTRRGQPCWYKLPKVGMIAVNDGILLRNHITRILKNHF 64 Query: 113 LLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 + +++ ++ + S L+ + E +L + SL +H ++ Sbjct: 65 RAKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLP----------IHRRIV 114 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + L+AG +K+ + +GI FQ+ DD LD + +GK Sbjct: 115 QYKTAYYSFYLPAACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFADPEVLGK- 173 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREK 250 IG D ++ K + V+ A + + +K Sbjct: 174 IGTDIQDFKCSWLVVKALELCNEEQK 199 >gi|12231186|dbj|BAB20977.1| putative GGPP synthase [Lactuca indica var. laciniata] Length = 126 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 16/126 (12%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETK---SQEALEALS-LVACTLAEGE 144 RRGK +V+G +VL GD LLS +F + TK S L A+ L C +EG Sbjct: 4 FRRGKPTNHIVYGEDVAVLAGDALLSFSFEHIATATKGVSSDRILRAIGELAKCIGSEG- 62 Query: 145 LRQLSLSKNLDVTEE------DYLHVIK-SKTAVLFSAALEVSSLIAGVQNSVRQALKSY 197 L + +DV E D+L I KTA L ++ + +++ G + + L+ + Sbjct: 63 ---LVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKF 119 Query: 198 GMNLGI 203 ++G+ Sbjct: 120 ARSIGL 125 >gi|14279425|gb|AAK58594.1|AF268889_1 farnesyl pyrophosphate synthase [Humulus lupulus] Length = 342 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 64/290 (22%), Positives = 118/290 (40%), Gaps = 48/290 (16%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGK- 94 Y + GGK L T+ L IE++ L+ DD++D+S RRG+ Sbjct: 58 YQLLKGGKELTEEEIFLTSA-----------LGWCIEWLQAYFLVLDDIMDNSVTRRGQP 106 Query: 95 ----------VAAR--LVWGNQTSVLVGDFLLSQAFCMVI-----ETKSQEAL-EALSLV 136 +AA ++ N ++ +++ + + E + Q A + + L+ Sbjct: 107 CWFRVPKVGLIAANDGILLRNHIPRILKKHFKGKSYYVDLLDLFNEVEFQTASGQMIDLI 166 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLH--VIKSKTAVL-FSAALEVSSLIAGVQNSVRQA 193 E +L + S+ LH +++ KTA F + + ++AG Sbjct: 167 TTIEGEKDLSKYSIP----------LHHRIVQYKTAYYSFYLPVACALVMAGENLDNHVD 216 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 +K+ + +G FQ+ DD LD G + +G IG D + K + V+ A + T+ +K Sbjct: 217 VKNVLIEMGTYFQVQDDYLDCFGHPDVIG-TIGTDIEDFKCSWLVVKALEIATEEQKKML 275 Query: 254 KSTINDG-KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 G + SV+ +K+ + + D E +Y QK S+ P Sbjct: 276 FEHYGKGDEASVKKVKELYKALDLEGVFADYENASY---QKLIKSIEAHP 322 >gi|10801556|dbj|BAB16691.1| GGPP synthase 1 [Hevea brasiliensis] Length = 127 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 13/125 (10%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEAL-----SLVACTL 140 LRRGK +V+G +VL GD LL+ AF + + S + A+ ++ A L Sbjct: 4 LRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGL 63 Query: 141 AEGELRQLSL--SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++ ++ S +D+ + +++H+ KTA L A+ + +++ G + + L+ Y Sbjct: 64 VAGQVVDINSEGSSEVDLEKLEFIHI--HKTAKLLEGAVVLGAILGGGTDEEVEKLRKYA 121 Query: 199 MNLGI 203 +G+ Sbjct: 122 RGIGL 126 >gi|302421470|ref|XP_003008565.1| farnesyl pyrophosphate synthetase [Verticillium albo-atrum VaMs.102] gi|261351711|gb|EEY14139.1| farnesyl pyrophosphate synthetase [Verticillium albo-atrum VaMs.102] Length = 346 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 16/199 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-- 124 L E + L+ DD++D S RRGK G + F+L A +++ Sbjct: 79 LGWMTELLQAFFLVSDDIMDSSITRRGKPCWYRHEGVGMVAINDAFMLEAAIYTLLKKFF 138 Query: 125 KSQEA-LEALSLVACTLAEGELRQL-------SLSKNLD-VTEEDYLHVIKSKTA---VL 172 +S + ++ + L E E+ QL NLD + + Y ++ KTA Sbjct: 139 RSHPSYVDLIELFHDVTFETEMGQLCDLLTAPEDKVNLDNFSMDKYSFIVIYKTAYYSFY 198 Query: 173 FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 AL + L N+++QA ++ + LG FQ+ DD LD G +GK IG D + Sbjct: 199 LPVALALHCLNIATPNNLKQA-EAILIPLGEYFQVQDDYLDNFGLPEHIGK-IGTDIMDN 256 Query: 233 KPTLPVILAFQRGTKREKN 251 K V A Q T ++ Sbjct: 257 KCGWLVNQALQIATPEQRQ 275 >gi|189210164|ref|XP_001941414.1| farnesyl pyrophosphate synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977507|gb|EDU44133.1| farnesyl pyrophosphate synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 347 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 66/274 (24%), Positives = 111/274 (40%), Gaps = 33/274 (12%) Query: 8 TLKDMEKVNFLI---LKRICSDVEMIPDVVKYLIFS------GGKRLRPMLTLATALMLE 58 TLKD E V I L+ C + + + + S GGK R M + T +L+ Sbjct: 4 TLKDFESVWPRIVADLQDHCKGYNLPQNCLDWFTKSLSYNTIGGKCNRGMSVVDTTSILQ 63 Query: 59 YR----GDNH----VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVG 110 + G LL IEF+ L+ DD++D S RRG L L Sbjct: 64 NKTLEPGSEEYFRAALLGWMIEFLQAFFLVSDDIMDSSKTRRGNPCWYLAPKVGMIALND 123 Query: 111 DFLLSQAFCMVIETKSQE------ALEALSLVACTLAEGELRQLSLSKNLDV-----TEE 159 F+L + ++++ ++ +E V G+L L + DV + E Sbjct: 124 SFMLEASIYILLKKHFRQDKSYIDMVELFQEVTFQTECGQLCDLITAPEDDVDLDKFSLE 183 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG---MNLGIAFQLVDDVLDYRG 216 + ++ KTA +S L V+ + + + LK+ + +G FQ DD LD Sbjct: 184 KFTFIVIYKTAY-YSFYLPVALALYYTGAATPKNLKTAEDILIPMGEYFQAQDDYLDAFA 242 Query: 217 EVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + +GK IG D + K + + A ++ T ++ Sbjct: 243 DPKVLGK-IGTDIMDNKCSWLINQALKKVTPEQR 275 >gi|1922251|emb|CAA72793.1| farnesyl pyrophosphate synthase [Gossypium arboreum] Length = 342 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 29/197 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTSVLVGDFL 113 L IE++ L+ DD++D S RRG+ V ++ N + ++ + Sbjct: 78 LGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVNDGVILRNHITRILKNHF 137 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 + + + + E + Q A + + L+ E +L + SL + + +++ Sbjct: 138 RGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYSLQQ--------HRRIVQY 189 Query: 168 KTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KTA F + + ++ G +K+ +++GI FQ+ DD LD G +GK IG Sbjct: 190 KTAYYSFYLPVACALVMCGENLDNHIDVKNILVDMGIYFQVQDDYLDCFGNPETIGK-IG 248 Query: 227 EDFRNGKPTLPVILAFQ 243 D N K + V+ A + Sbjct: 249 TDIENFKCSWLVVKALE 265 >gi|156847950|ref|XP_001646858.1| hypothetical protein Kpol_2002p71 [Vanderwaltozyma polyspora DSM 70294] gi|156117539|gb|EDO19000.1| hypothetical protein Kpol_2002p71 [Vanderwaltozyma polyspora DSM 70294] Length = 352 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 119/288 (41%), Gaps = 38/288 (13%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHV------------LLACAIEFIHTATLLHDDVVDD 87 GGK R + + T +L +G N V +L +E + L+ DD++D Sbjct: 48 PGGKLNRGLSVVDTYAIL--KGYNSVDDLSKDEYRRVAVLGWCVELLQAYFLVADDMMDK 105 Query: 88 SALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI------ETKSQEALEALSLVACTLA 141 S RRG+ V + F+L A ++ E+ + +E V Sbjct: 106 SITRRGQPCWYRVEDVGEIAINDAFMLEAAIYELLKKYFRSESYYIDLIELFHDVTFQTE 165 Query: 142 EGELRQL--SLSKNLDVTE---EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNS--VRQA 193 G+L L + +++D+++ E + ++ KTA F + ++ +AG + ++QA Sbjct: 166 MGQLLDLITAPEESVDLSKFSLEKHSFIVIFKTAYYSFYLPVALAMYVAGNHDPKDLKQA 225 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 + + LG FQ+ DD LD G ++GK IG D ++ K + V A Q T ++ Sbjct: 226 -QDVLIPLGEYFQIQDDYLDCFGTPEQIGK-IGTDIQDNKCSWVVNKALQLATPEQRKLL 283 Query: 254 KSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +E KK F N +D Y Y +K + LR Sbjct: 284 DENYGRKNSEMEAKCKKLF-----NEMGIDKYYHEYE--EKVAEDLRA 324 >gi|89675427|gb|ABD77586.1| farnesyl diphosphate synthase [Vitis vinifera] Length = 176 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 36/182 (19%) Query: 62 DNHVLLAC----AIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQ 104 D+ V LAC IE++ L+ DD++D+S RRG+ +AA ++ NQ Sbjct: 5 DDEVCLACVLGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVILRNQ 64 Query: 105 TSVLVGDFLLSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTE 158 ++ + + + + + E + Q A + + L+ E +L + SL Sbjct: 65 IPRILKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP------- 117 Query: 159 EDYLH--VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 LH +++ KTA F + + L+AG ++K + +GI FQ+ DD LD Sbjct: 118 ---LHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCF 174 Query: 216 GE 217 G+ Sbjct: 175 GD 176 >gi|300079894|gb|ADJ67472.1| farnesyl pyrophosphate synthase [Artemisia annua] Length = 343 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 40/256 (15%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQ 104 D+ + L+ A IE++ L+ DD++D+S RRG+ +AA ++ N Sbjct: 70 DDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLLKVGMIAANDGILLRNH 129 Query: 105 TSVLVGDFLLSQAFC-----MVIETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTE 158 ++ + + + E + Q A + + L+ + E +L + SLS Sbjct: 130 VPRILKKHFRGKPYYEDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSI------ 183 Query: 159 EDYLHVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217 + +++ KTA F + + L+ G +K+ + +G FQ+ DD LD G Sbjct: 184 --HRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQDDYLDCFGA 241 Query: 218 VNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK---ISVENLKKAFIIM 274 +GK IG D + K + V+ A + + +K N GK SV +K+ + + Sbjct: 242 PEVIGK-IGTDIEDFKCSWLVVKALELANEEQKKVLHE--NYGKKDPASVAKVKEVYHTL 298 Query: 275 RENRALVDTEYRAYSY 290 N V +Y A SY Sbjct: 299 --NLQAVFEDYEATSY 312 >gi|317029196|ref|XP_001391030.2| hypothetical protein ANI_1_558054 [Aspergillus niger CBS 513.88] Length = 619 Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 15/178 (8%) Query: 73 FIH--TATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 F H ++++ DD+ D S LRRG+ A +++G + + + +A + T + + Sbjct: 363 FAHLCASSVMLDDIQDGSDLRRGQPATHILYGESQTTNSALYGIVKALSLAASTDGKHS- 421 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSS 181 + L ++E L + L+V + +Y++++ KT F AL + Sbjct: 422 -QILLGGDFVSEKSLSDSIRGQALEVHWRYHARCPSNMEYINMVDCKTGSFFRCALRLLE 480 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 AG + L LG FQ+ +D + + K ED GK +LP+I Sbjct: 481 AEAGTK--AIPELHHLVTLLGRYFQVYNDYRNLSDDKYIATKGFCEDLSEGKFSLPLI 536 >gi|241804940|ref|XP_002416416.1| hypothetical protein IscW_ISCW015416 [Ixodes scapularis] gi|215510880|gb|EEC20333.1| hypothetical protein IscW_ISCW015416 [Ixodes scapularis] Length = 226 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 13/154 (8%) Query: 75 HTATLLHDDVVDDSALRRGKVAARLVW--GNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 H LLH V+D A + W G++ ++L+GDF + AF + +T+ L Sbjct: 3 HVMQLLHYSVMDTG--EHNDEAKKKNWELGDKLAILLGDFFWALAFKEIADTQDTTVLST 60 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + + A ++ ++ + F++A E S L+AGV+ Sbjct: 61 FARGIESFAASSFEEIP-----HCVSAEWWKDFTPRQCSWFASAFECSLLVAGVECPKEL 115 Query: 193 A-LKSYGMNLGIAFQ---LVDDVLDYRGEVNEMG 222 A + G NL +A Q +++ L G++ +M Sbjct: 116 AEARKCGTNLVLAMQAREIINHFLKNLGQIPQMS 149 >gi|213404660|ref|XP_002173102.1| decaprenyl-diphosphate synthase subunit 2 [Schizosaccharomyces japonicus yFS275] gi|212001149|gb|EEB06809.1| decaprenyl-diphosphate synthase subunit 2 [Schizosaccharomyces japonicus yFS275] Length = 286 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 12/136 (8%) Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IH A +H V + K A + + VLVGD+LL +A + K E Sbjct: 116 ELIHAANAIHKSVQE-----HAKEAHSIT---KLKVLVGDYLLGKASVDLASLKDNSITE 167 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 ++ L EG Q + +++ +E L + ++A L + A +S++ + Sbjct: 168 LMASAIANLIEGNFPQTRDTMSIE-SERRRLRL---QSAFLPAKACLCASILNRASEHIS 223 Query: 192 QALKSYGMNLGIAFQL 207 QA YG++LG A QL Sbjct: 224 QACFEYGLHLGTAMQL 239 >gi|225684972|gb|EEH23256.1| farnesyl pyrophosphate synthetase [Paracoccidioides brasiliensis Pb03] gi|226294284|gb|EEH49704.1| farnesyl pyrophosphate synthetase [Paracoccidioides brasiliensis Pb18] Length = 346 Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 16/198 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 L E + L+ DD++D S RRG+ G + F+L + ++++ Sbjct: 79 LGWLTELLQAFFLVSDDMMDGSHTRRGEPCWHRRPGVNLIAINDSFMLESSIYVILKKHF 138 Query: 127 Q------EALEALSLVACTLAEGELRQLSLSK----NLDVTEEDYLHVIKSKTAVLFSAA 176 + + LE V+ G+L L + NLD D + I +S Sbjct: 139 RFHPAYVDFLELFHEVSFQTELGQLCDLLTAPEDNVNLDNFNMDKFNFIVIYKTAYYSFY 198 Query: 177 LEVSSLIAGVQ----NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 L V+ + +Q ++RQA + LG FQ DD LD G+ ++GK IG D ++ Sbjct: 199 LPVALALHYLQLATPGNLRQA-HDILIPLGQYFQAQDDFLDVFGKPEQIGK-IGTDIQDN 256 Query: 233 KPTLPVILAFQRGTKREK 250 K + + A +R + ++ Sbjct: 257 KCSWVINQALKRCSPEQR 274 >gi|297291452|ref|XP_002803898.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 2 [Macaca mulatta] Length = 297 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 1/96 (1%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161 + + +E L+ L +G + S SK + DY Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSKAQEKGRLDY 243 >gi|19074981|ref|NP_586487.1| FARNESYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon cuniculi GB-M1] gi|19069706|emb|CAD26091.1| FARNESYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon cuniculi GB-M1] Length = 292 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 15/206 (7%) Query: 31 PDVVKYLIFS--GGKRLR--PMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVD 86 P+V+ L ++ GGK LR + + AL E +N +++ ++E + L+ DD++D Sbjct: 20 PEVLFLLDYNLGGGKELRYKAYVHVLKALNGEVSMEN-LIMGYSVELLQAVLLIVDDIMD 78 Query: 87 DSALRRGKVAARLVWGNQTSVLVGD-FLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 +S +RRGK L G +T V D F L A ++ K ++ C G+ Sbjct: 79 NSKIRRGKPCYYLKRGMKT---VKDAFFLLGAIRKLLSEKMKKPYSDSVFKTCL---GQT 132 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLG-IA 204 + + E Y+ + +SKT V +A N A NLG + Sbjct: 133 HDTIRKTRSEYSLETYVAIAESKTGAYTFYLPAVLGYVAA--NKAEPACLWDFCNLGALI 190 Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFR 230 FQ+ DD L++ E + N E+ + Sbjct: 191 FQMQDDYLNFLPEKSSKSMNDLEEMK 216 >gi|75233326|sp|Q7XYS9|FPPS1_ARTSI RecName: Full=Farnesyl diphosphate synthase 1; Includes: RecName: Full=Dimethylallyltranstransferase; Includes: RecName: Full=(2E,6E)-farnesyl diphosphate synthase gi|32329199|gb|AAP74720.1| farnesyl diphosphate synthase [Artemisia spiciformis] Length = 346 Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 44/258 (17%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-----------VAAR---LVWGN 103 D+ + L+ A IE++ L+ DD++D+S RRG+ +AA L+ + Sbjct: 73 DDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGILLRNH 132 Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTE 158 +L F + +++ ++ + S L+ + E +L + SLS Sbjct: 133 VPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLS------- 185 Query: 159 EDYLH--VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 +H +++ KTA F + + L+ G +K+ + +G FQ+ DD LD Sbjct: 186 ---IHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDCF 242 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK---ISVENLKKAFI 272 G +GK IG D + K + V+ A + + +K N GK SV +K+ + Sbjct: 243 GAPEVIGK-IGTDIEDFKCSWLVVKALELANEEQKKTLHE--NYGKKDPASVAKVKEVYH 299 Query: 273 IMRENRALVDTEYRAYSY 290 + N V +Y A SY Sbjct: 300 TL--NLQAVFEDYEATSY 315 >gi|322800772|gb|EFZ21658.1| hypothetical protein SINV_01398 [Solenopsis invicta] Length = 352 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 72/302 (23%), Positives = 130/302 (43%), Gaps = 43/302 (14%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M + +D+ ME LI + +E +++Y + GGK++R LTL A Sbjct: 17 MIIWQDIVRDTMEMAKNLITPDVADWIE---KMLQYTV-PGGKKIRS-LTLIYAYKSLVS 71 Query: 61 GDNHV--------LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LV 109 D +LA +E + + ++ +D+ + S LRRG+ W + + Sbjct: 72 KDQLTEDNIRLVRILAWCVELMQASLIVIEDIQNQSLLRRGQPC----WYRCNDIDKAAI 127 Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL------------RQLSLSKNLDV- 156 D++L Q I K + E + T E +LS NLD+ Sbjct: 128 NDYILLQNTIYYILQKYFKDKECYVSLVETFQEALFMTVMGQYLDFFSTELSKRPNLDLF 187 Query: 157 TEEDYLHVIKSKTAVLFSAALE--VSSLIAGVQ--NSVRQALKSYGMNLGIAFQLVDDVL 212 T + Y +++ K + +S L V+ +AG++ N +QA +++G FQ+ D L Sbjct: 188 TMDRYSSIVEYKES-HYSVILPVVVAMHLAGIKDLNMFKQA-NVILLDIGHLFQVQIDYL 245 Query: 213 DYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST--INDGKISVENLKKA 270 + G+ + GK+ D + GK T ++ A R T ++ K I D + ++ +K+ Sbjct: 246 NCFGDSDVYGKD-STDIQKGKCTWLIVAALLRATSEQRKVLKECYGILDPQ-KIKRVKQI 303 Query: 271 FI 272 FI Sbjct: 304 FI 305 >gi|296817039|ref|XP_002848856.1| farnesyl pyrophosphate synthetase [Arthroderma otae CBS 113480] gi|238839309|gb|EEQ28971.1| farnesyl pyrophosphate synthetase [Arthroderma otae CBS 113480] Length = 347 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 28/217 (12%) Query: 40 SGGKRLRPMLTLATALMLEYRGDN-----HV-LLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R + TAL L + N H+ LL E + L+ DD++D S RRG Sbjct: 47 PGGKLNRGLSVPDTALALLEKPLNEEQFKHLGLLGWMTELLQAFFLVSDDIMDSSITRRG 106 Query: 94 KVAARLVWGNQTSVLVGDFLLSQAFCMVIET--KSQEA-LEALSLVACTLAEGELRQLSL 150 + G + F+L + ++++ +S A ++ + L + EL QL Sbjct: 107 EPCWYRRPGVGMIAINDAFMLESSIYVLLKKHFRSHPAYIDLVELFHEITFQTELGQLC- 165 Query: 151 SKNLDVTEEDYL-----------HVIKSKTA---VLFSAALEVSSLIAGVQNSVRQALKS 196 +L ED++ ++ KTA AL + L ++RQA Sbjct: 166 --DLITAPEDHVDLDNFSMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPKNLRQA-HD 222 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 + LG FQ DD LD G+ ++GK IG D ++ K Sbjct: 223 ILIPLGQYFQAQDDYLDVFGKPEQIGK-IGTDIQDNK 258 >gi|253742869|gb|EES99536.1| Farnesyl diphosphate synthase [Giardia intestinalis ATCC 50581] Length = 407 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 111/275 (40%), Gaps = 56/275 (20%) Query: 28 EMIPDVVKYLIFSGGKRLRPMLTLATAL---------MLEYRGDNHVLLACAI------E 72 E I +V+KY GGK R L L +LE + LL +I E Sbjct: 52 EHIAEVIKYNAI-GGKMTRGTLAADVFLQTVRFLFPGLLEDSNFSEELLNLSIDICLIQE 110 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL--LSQAFCMVIETKSQEAL 130 + A L+ DDV+D S +RRGK + R V G++ +V G L ++ + +E K + L Sbjct: 111 TLQAAFLMLDDVIDHSTVRRGKPSWRTVVGDEQAVNDGMMLWQVADSLTFYLEDKCGKTL 170 Query: 131 EALSLV----ACTLAEGELRQL--SLSKNLDVTEEDYLHVIKS-------------KTAV 171 + + A T+ L + S+ + + +++K+ + V Sbjct: 171 KIFEVFHQVKANTIFGQHLDTFTKTYSQRYTMRHLNDTYILKTAYYTFYFPLMMGYRAGV 230 Query: 172 LF-------SAALE-------VSSLIAGVQN---SVRQALKSYGMNLGIAFQLVDDVLDY 214 LF SAA E V S++ Q+ V Q + M+LG +Q+ DD LD+ Sbjct: 231 LFGNVAIGASAASEGRQTMQKVDSILNLQQHLDADVEQQIYKISMDLGRLYQMQDDFLDF 290 Query: 215 RGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 E+ D+ K P++ A + E Sbjct: 291 YAP--EILHKESTDYLESKAVWPLVRALEISASEE 323 >gi|116199155|ref|XP_001225389.1| farnesyl pyrophosphate synthetase [Chaetomium globosum CBS 148.51] gi|88179012|gb|EAQ86480.1| farnesyl pyrophosphate synthetase [Chaetomium globosum CBS 148.51] Length = 267 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 79/188 (42%), Gaps = 24/188 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVI 122 L E + L+ DD++D S RRGK W Q V + D F+L A ++ Sbjct: 80 LGWMTELLQAFFLVSDDIMDSSITRRGKPC----WYRQEGVGMIAINDAFMLEAAIYTLL 135 Query: 123 ET---KSQEALEALSLVACTLAEGELRQLS--LSKNLDVTE------EDYLHVIKSKTA- 170 + ++ L L + E+ QL L+ DV + E Y ++ KTA Sbjct: 136 KKFFRSHPRYVDLLELFHEVTYQTEIGQLCDLLTAPEDVVDLDNFSMEKYRFIVVYKTAY 195 Query: 171 --VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 AL + L +++QA + + LG FQ+ DD LD G +GK IG D Sbjct: 196 YSFYLPVALALYMLDIATPENLKQA-EDILIPLGEYFQIQDDYLDNFGLPEHIGK-IGTD 253 Query: 229 FRNGKPTL 236 + K +L Sbjct: 254 IMDNKCSL 261 >gi|91084147|ref|XP_970126.1| PREDICTED: similar to candidate tumor suppressor protein [Tribolium castaneum] gi|270008055|gb|EFA04503.1| hypothetical protein TcasGA2_TC014811 [Tribolium castaneum] Length = 413 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 42/79 (53%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E I T+ L+H +V+ + +++GN+ ++L GD+LLS + + ++ Sbjct: 142 LAEVTEMIRTSHLVHKGLVNLQPSAATDASGDMMFGNKIALLSGDYLLSNSCTELANLRN 201 Query: 127 QEALEALSLVACTLAEGEL 145 Q+ +E +S LAE E Sbjct: 202 QDLVELMSSAVRDLAEAEF 220 >gi|1346030|sp|P49350|FPPS_ARTAN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|1022770|gb|AAC49452.1| farnesyl diphosphate synthase [Artemisia annua] Length = 343 Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 44/258 (17%) Query: 62 DNHVLLACA----IEFIHTATLLHDDVVDDSALRRGK-----------VAAR---LVWGN 103 D+ + L+ A IE++ L+ DD++D+S RRG+ +AA L+ + Sbjct: 70 DDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGILLRNH 129 Query: 104 QTSVLVGDFLLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTE 158 +L F + +++ ++ + S L+ + E +L + SLS Sbjct: 130 VPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLS------- 182 Query: 159 EDYLH--VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 +H +++ KTA F + + L+ G +K+ + +G FQ+ DD LD Sbjct: 183 ---IHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDCF 239 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK---ISVENLKKAFI 272 G +GK IG D + K + V+ A + + +K N GK SV +K+ + Sbjct: 240 GAPEVIGK-IGTDIEDFKCSWLVVKALELPNEEQKKTLHE--NYGKKDPASVAKVKEVYH 296 Query: 273 IMRENRALVDTEYRAYSY 290 + N V +Y A SY Sbjct: 297 TL--NLQAVFEDYEATSY 312 >gi|12862621|dbj|BAB32549.1| putative GGPP synthase 1 [Euphorbia tirucalli] gi|14041811|dbj|BAB55456.1| putative GGPPsynthase [Euphorbia tirucalli] Length = 127 Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 19/128 (14%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIET-------------KSQEALEALSL 135 LRRGK +V+G +VL GD LL+ AF + + T + +A+ A L Sbjct: 4 LRRGKPTNHIVYGEDVAVLAGDALLAFAFEHIAVSTLNVSPARIVRAIGELAKAIGAEGL 63 Query: 136 VACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195 VA + + LS +D+ +++H+ KTA L A+ + +++ G + + L+ Sbjct: 64 VAGQVVDISSEGLS---EVDLERLEFIHI--HKTAKLLEGAVVLGAILGGGTDEQVEKLR 118 Query: 196 SYGMNLGI 203 Y +G+ Sbjct: 119 KYARGIGL 126 >gi|317156440|ref|XP_001825747.2| hypothetical protein AOR_1_88054 [Aspergillus oryzae RIB40] Length = 346 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G ++ C+ H++ +L DD+ DDS+ RRG AA +++G +V + ++AF + Sbjct: 242 GSTEIIKTCSTILFHSSLML-DDIQDDSSKRRGMPAAHVMYGVGQTVNCVSYTGAKAFFL 300 Query: 121 VIETKSQEA 129 E K+ A Sbjct: 301 CEELKNANA 309 >gi|326490229|dbj|BAJ84778.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 355 Score = 38.9 bits (89), Expect = 1.00, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 31/234 (13%) Query: 65 VLLACA----IEFIHTATLLHDDVVDDSALRRGK-------------VAARLVWGNQTS- 106 LAC IE++ L+ DD++D+S RRG+ V ++ N S Sbjct: 85 TFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISR 144 Query: 107 VLVGDFLLSQAFCMVIETKSQEALEALS---LVACTLAEGELRQLSLSKNLDVTEEDYLH 163 +L F + +I+ ++ + S L T EGE + L+ NL+V + Sbjct: 145 ILQRHFRGKPYYVDLIDLFNEVEFKTASGQLLDLITTHEGE-KDLT-KYNLNV----HRR 198 Query: 164 VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 +++ KTA F + + L++G +K+ + +G FQ+ DD LD G+ +G Sbjct: 199 IVQYKTAYYSFYLPVACALLLSGENLDNFGDVKNILVEMGTYFQVQDDYLDCFGDPESIG 258 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 K IG D + K + V+ A + +K N GK E++ K + +E Sbjct: 259 K-IGTDIEDYKCSWLVVQALDHADESQKRILLE--NYGKSDPESVAKVKDLYKE 309 >gi|322696191|gb|EFY87987.1| Farnesyl pyrophosphate synthetase [Metarhizium acridum CQMa 102] Length = 347 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 28/224 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVI 122 L E + L+ DD++D S RRGK W Q V + D F+L + +++ Sbjct: 80 LGWMTELLQAFFLVSDDMMDGSITRRGKPC----WYRQEGVGMIAINDAFILESSIYVLL 135 Query: 123 ET--KSQEA-LEALSLVACTLAEGELRQLS--LSKNLDVTEEDYLHVIKSKTAVLF---- 173 +S A ++ + L T + E+ QL L+ D D + K + V++ Sbjct: 136 RKYFRSHPAYIDIVELFQETTFQTEMGQLCDLLTAPEDKVNLDNFSMTKYRFIVIYKTAY 195 Query: 174 -----SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 AL + L +++QA + + LG FQ+ DD LD G +GK IG D Sbjct: 196 YSFYLPVALALHQLNLATPKNLKQA-EDILIPLGEYFQIQDDYLDNFGLPEHIGK-IGTD 253 Query: 229 FRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFI 272 ++ K + V A + T ++ + D E+ K+A I Sbjct: 254 IKDNKCSWLVNQALEIATPEQRKI----LEDNYGQKEDAKEAVI 293 >gi|224010173|ref|XP_002294044.1| probable farnesyl pyrophosphate synthetase [Thalassiosira pseudonana CCMP1335] gi|220970061|gb|EED88399.1| probable farnesyl pyrophosphate synthetase [Thalassiosira pseudonana CCMP1335] Length = 360 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 61/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%) Query: 40 SGGKRLRPMLT------LATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 GGK R + L ++ E + +L +E++ L+ DD++D S RRG Sbjct: 51 PGGKMTRGLTVIKGVEVLKGRILTEVEYKHAAILGWQVEWLQAFFLVADDIMDGSITRRG 110 Query: 94 KVAARLVWGNQTSVL----VGDFLL---------------SQAFCMVIE-----TKSQEA 129 W Q +V + D L+ ++ ++E T E Sbjct: 111 NPC----WYKQPNVTQDNAINDALILENMIYQTLRRHFKGHPSYVQILELFIDTTYQTEI 166 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQN 188 + + A+G+ +L L++ T + Y ++ KT F + ++ G Sbjct: 167 GQHIDTNGTPYADGKRAELDLTR---FTLDRYQGCVRYKTCYYSFYLSCALALAYCGYDP 223 Query: 189 SVRQALKSYG------MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + + Y M LG FQ+ DDVLD +GK IG D + K + V A Sbjct: 224 ESGEGKELYANAEDVCMRLGEYFQIQDDVLDAFAPPEVLGK-IGTDIEDAKCSWLVCKAL 282 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + + +K N GK E ++K + RE Sbjct: 283 EMVNEEQKKVLVE--NYGKHDAEGVEKVKELYRE 314 >gi|238498004|ref|XP_002380237.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] gi|220693511|gb|EED49856.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] Length = 387 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 47/226 (20%), Positives = 90/226 (39%), Gaps = 31/226 (13%) Query: 25 SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV 84 +D + + Y+ K +R A LE + + I +H ++L+ DD+ Sbjct: 98 TDYKAVKAPYNYINTLPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDI 157 Query: 85 VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE 144 D+S RRG ++G VG + S + V + + L++ + + + + Sbjct: 158 EDNSVPRRGSPTTHTLFG------VGQTINSANYTFVCAFEELQKLQSPNAIGVFIE--Q 209 Query: 145 LRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL- 194 L+ L + LD+ T ++Y+ +I KT F + L+ G + + + Sbjct: 210 LKNLHCGQGLDLYWKYNTHVPTADEYMTMIDHKTGGPFRLCVR---LMQGESSGKTEHID 266 Query: 195 -KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + LG FQ+ DD + ED GK + P+I Sbjct: 267 ARRFVTLLGRYFQIRDDYQNLTS---------AEDLDEGKSSWPLI 303 >gi|145243448|ref|XP_001394251.1| geranylgeranyl diphosphate synthase [Aspergillus niger CBS 513.88] gi|134078925|emb|CAK48316.1| unnamed protein product [Aspergillus niger] Length = 335 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 23/217 (10%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 ++ IH +L DD+ D+S R+GK AA ++G + + ++Q ++ + A Sbjct: 97 MDAIHLCLMLVDDITDNSDYRKGKPAAHRIYGPSETANRAYYRVTQILNETVQRFPKLAK 156 Query: 131 EALSLVACTLAEGE-----LRQLSLSKNLDVTEED---YLHVIKSKTAVLFSAALEVSSL 182 L + L EG+ R+ L V EE Y + KT LF Sbjct: 157 FLLQNLEEIL-EGQDLSLIWRRDGLGSLSTVPEERVAAYRKMASLKTGALFR-------- 207 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLD-YRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + G Q++ L QL +D + Y E + + ED RN + + P+ILA Sbjct: 208 LLGQLVMEDQSMDGTMTTLAWCSQLQNDCKNVYSSEYAKAKGALAEDLRNRELSYPIILA 267 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENR 278 + + W ++ + S N++KA +++ R Sbjct: 268 LE----APEGHWVASALETS-SPRNIRKALAVIQSER 299 >gi|19115339|ref|NP_594427.1| decaprenyl diphosphate synthase subunit 2 Dlp1 [Schizosaccharomyces pombe 972h-] gi|60389474|sp|O13851|DLP1_SCHPO RecName: Full=Decaprenyl-diphosphate synthase subunit 2; AltName: Full=All-trans-decaprenyl-diphosphate synthase subunit 2; AltName: Full=Decaprenyl pyrophosphate synthase subunit 2 gi|2239206|emb|CAB10123.1| decaprenyl diphosphate synthase subunit 2 Dlp1 [Schizosaccharomyces pombe] gi|34393187|dbj|BAC82458.1| decaprenyl diphosphate synthase subunit2 [Schizosaccharomyces pombe] Length = 294 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 19/175 (10%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA E IH A ++H ++ ++ + + K+A LVGD+LL +A + ++ Sbjct: 117 LARVTELIHAANIIHINIGEEQSNEQIKLA----------TLVGDYLLGKASVDLAHLEN 166 Query: 127 QEALEALSLVACTLAEGEL--RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 E ++ V L EG RQ + ++ ++ E I ++A + + A +S++ Sbjct: 167 NAITEIMASVIANLVEGHFGSRQ---NGSVGLSNE---RTILLQSAFMPAKACLCASILN 220 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF-RNGKPTLPV 238 + A +YG LG++ QL + +V + +I + + N K +L V Sbjct: 221 NSSQYINDACFNYGKFLGLSLQLAHKPVSPDAQVLQKNNDILKTYVENAKSSLSV 275 >gi|109130476|ref|XP_001097788.1| PREDICTED: farnesyl pyrophosphate synthase-like [Macaca mulatta] Length = 380 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVL----VGDFLLSQAFCM--VIET 124 +E + L+ DD++D S +G++ W Q + + D +L +A C+ +++ Sbjct: 120 VELLQAFFLVADDIMDSSLSPQGQI-----WWYQKPGMGLDAINDAMLPEA-CIYHLLKL 173 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAV 171 E L L+ L Q + + LD+ TE+ Y ++K K A Sbjct: 174 YCLEQPYYLDLIQLFLQSS--YQTDIGQTLDLITAPQGNVGLGRFTEKRYKSIVKYKAAF 231 Query: 172 LFSAALEVSSLIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 + + IAG+ A K +++G FQ+ DD LD G+ + K +G D + Sbjct: 232 YSYLPVAAAMYIAGIDGEKNHANAKKILLDMGEFFQIQDDYLDLFGDPSVTSK-VGADIQ 290 Query: 231 NGKPTLPVILAFQRGTKREKNFWK 254 + K + V+ Q+ T + K Sbjct: 291 DNKCSWLVVQRLQQATPEQYQILK 314 >gi|42572937|ref|NP_974565.1| FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase [Arabidopsis thaliana] gi|332658459|gb|AEE83859.1| farnesyl diphosphate synthase 2 [Arabidopsis thaliana] Length = 247 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 8/159 (5%) Query: 164 VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 +++ KTA F + + L+AG +K+ +++GI FQ+ DD LD + +G Sbjct: 91 IVEYKTAYYSFYLPVACALLMAGENLENHTDVKTVLVDMGIYFQVQDDYLDCFADPETLG 150 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVD 282 K IG D + K + V+ A +R ++ + N GK N+ K + +E +D Sbjct: 151 K-IGTDIEDFKCSWLVVKALERCSEEQTKILYE--NYGKAEPSNVAKVKALYKE----LD 203 Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 E Y +++ + L L ++ K++ V+ L ++ Sbjct: 204 LEGAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFLAKI 242 >gi|145251934|ref|XP_001397480.1| geranyltranstransferase [Aspergillus niger CBS 513.88] gi|134083021|emb|CAK42784.1| unnamed protein product [Aspergillus niger] Length = 349 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 30/235 (12%) Query: 40 SGGKRLRPMLTLATALML------EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRG 93 + GK LR + T L + E + +L +E + L HDD++D+S+ RRG Sbjct: 47 TNGKMLRGLSVPQTGLSILGRPVTEQEYHDLCVLGWLVELLQAYLLTHDDIMDNSSTRRG 106 Query: 94 K--------VAARLVWGNQTSVLVGD--FLLSQ------AFCMVIETKSQEALEALSLVA 137 K V + V N S+L FLL Q A+ ++ET + + Sbjct: 107 KPCWYRLPSVGMKAV--NDGSLLRSSIFFLLKQHFQTHPAYLRIMETFHEVSFLCEIGQE 164 Query: 138 CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF-SAALEVSSLIAGVQNSVRQALKS 196 C E R + +N + E + + +K+ + S ++ + L +V+Q ++ Sbjct: 165 CDGIASEQRSI---ENWTMAEYEKICNLKAGYYTFYLSVSIALQYLQLDTPLNVQQ-IQD 220 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + LG +Q +D LD G + GK IG D + K + +I A Q + +++ Sbjct: 221 ILIPLGSFYQSQNDYLDIFGNHHLTGK-IGTDIQENKCSWVIIRALQMCSTEQRH 274 >gi|110590636|pdb|2HER|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Synthase (Cgd4_2550) In Complex With Zoledronate gi|110590637|pdb|2HER|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Synthase (Cgd4_2550) In Complex With Zoledronate gi|122921291|pdb|2O1O|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Synthase (Cgd4_2550) In Complex With Risedronate. gi|122921292|pdb|2O1O|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Synthase (Cgd4_2550) In Complex With Risedronate. gi|149243603|pdb|2Q58|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Synthase (Cgd4_2550) In Complex With Zoledronate gi|149243604|pdb|2Q58|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Synthase (Cgd4_2550) In Complex With Zoledronate Length = 368 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 24/219 (10%) Query: 19 ILKRICSDVEMIPDVVKYLI------FSGGKRLR-PMLTLATALMLEY---RGDNHVLLA 68 +LK++ + E+ V++Y + GK +R +L L ++L Y + D+ LL Sbjct: 42 VLKKLPLNDEIRKPVIEYYLNCIDYNVKKGKHIRGKILVLISSLSSAYSNIKRDSIYLLG 101 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV----------LVGDFLLSQAF 118 +E I L+ DD++D RRG +V G ++ L F LS F Sbjct: 102 WVVEAIQALILIADDIMDSGKFRRGAPCWYIVHGQSNAINDIFFLKMLSLSLIFELSSVF 161 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAAL 177 I K Q+ +L LSK D E Y +++ KT+ F + Sbjct: 162 GNDIVMKIQKIYNESIFFTVLGQHLDLSYFDLSK-ADKISERYFSMVEMKTSRYTFYMPV 220 Query: 178 EVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDY 214 ++ +Q S Q +++ LG +Q+ +DV DY Sbjct: 221 FFGLTLSEIQVSSAQLNLIEAILYKLGEFYQVHNDVSDY 259 >gi|78191047|gb|ABB29848.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana sanderae] Length = 234 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 29/204 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVA--------------ARLVWGNQTSVLVGDF 112 L IE++ L+ DD++D+S RRG+ L+ + T +L F Sbjct: 5 LGWRIEWLQAYFLVLDDIMDNSHTRRGQPCWYKLPKVGMIAVNDGILLRNHITRILKNHF 64 Query: 113 LLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 + +++ ++ + S L+ + E +L + SL + +++ Sbjct: 65 RAKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLPT--------HRRIVQY 116 Query: 168 KTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KTA F + + L+AG +K+ + +GI FQ+ DD LD + +GK IG Sbjct: 117 KTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFADPEVLGK-IG 175 Query: 227 EDFRNGKPTLPVILAFQRGTKREK 250 D ++ K + V+ A + +K Sbjct: 176 TDTQDFKCSWLVVKALVVCNEEQK 199 >gi|14422404|dbj|BAB60821.1| putative FPP synthase 1 [Eucommia ulmoides] Length = 305 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 33/206 (16%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAAR-------------LVWGNQTSVLVGDF 112 +L IE++ L+ DD++D S RRG++ L+ N ++ Sbjct: 46 VLGWCIEWLQACALVLDDIMDSSHTRRGQMCWYKLPKVGMIAINDGLILRNHVPRILKKH 105 Query: 113 LLSQAFCMVIETKSQEALEALSLVACTLAEGELRQL--SLSKNLDVTE---EDYLHVIKS 167 S+ + + E L+ V C G++ L +L +D++E + + S Sbjct: 106 FRSKPYYL-------ELLDLFHEVECQTVGGQMIDLITTLVGEIDLSEYSLPTHRQITVS 158 Query: 168 KTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KT+ F + + L+ G + L+S+ I ++ DD LD G+ +GK IG Sbjct: 159 KTSYYSFYLPVACALLMTG------EKLESHSGMKDILIEIQDDYLDCFGDPEVIGK-IG 211 Query: 227 EDFRNGKPTLPVILAFQRGTKREKNF 252 D + K T V+ A + + +K Sbjct: 212 SDIEDFKCTWLVVKALELCNEEQKKI 237 >gi|47220119|emb|CAF99032.1| unnamed protein product [Tetraodon nigroviridis] Length = 373 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 32/263 (12%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVA----ARLVWGNQTSVLVGDFLLSQAFCMVI 122 LA E IHTA L+H +VD L+ V+ + +GN+ +VL GDFLL+ A + Sbjct: 122 LAEITELIHTAFLVHRGIVD---LKEWTVSDGPLKDMQFGNKMAVLSGDFLLANACTGLA 178 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT----AVLFSAALE 178 + + + +E +S A G++ Q +N + +E L I T A L AL Sbjct: 179 QLDNTKVVELIS-----SAIGDVVQGLYYENCNGSENGVLQAIDMATWEEQAFLSHGALL 233 Query: 179 VSSLIAGVQ----NSVRQALK-SYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 S A ++ + Q+L YG +L + +L D+ + + + GE Sbjct: 234 AKSCQAALELARHDGQSQSLAYQYGKHLSLGHKLNSDLQPF------VKSSTGEPALFSL 287 Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENL--KKAFIIMRENRALVDTEYRAYSYG 291 + PV+ F R E W + K +L K ++ + + + + Sbjct: 288 FSAPVV--FHRQIIGEDQ-WHQQLQQAKTRRNHLDYSKLLAAVKSEKGVSSSVDLCRYHS 344 Query: 292 QKAKDSLRCLPDSSWKKSLMEVV 314 KA ++++ P S + +L + Sbjct: 345 NKALEAIQAFPSSEARSALENIA 367 >gi|10801552|dbj|BAB16689.1| GGPP synthase [Eucommia ulmoides] Length = 127 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 13/124 (10%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE------- 142 LRRGK +V+G +VL GD LL+ AF ++ + + + + V LA+ Sbjct: 4 LRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTGVPADRIVRVIGELAKSIGSEGL 63 Query: 143 --GELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++ + DV E +++HV KTA L ++ + +++ G + + L+ + Sbjct: 64 VAGQVIDICSEGMTDVGLEHLEFIHV--HKTAALLEGSVVLGAILGGATDPEVEKLRKFA 121 Query: 199 MNLG 202 +G Sbjct: 122 RCIG 125 >gi|19114211|ref|NP_593299.1| geranyltranstransferase Fps1 [Schizosaccharomyces pombe 972h-] gi|3287843|sp|O14230|FPPS_SCHPO RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|2330860|emb|CAB11097.1| geranyltranstransferase Fps1 [Schizosaccharomyces pombe] Length = 347 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 32/207 (15%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD---------FLLSQ 116 +L +E + + L+ DD++D S RRG+ L+ G ++ + D FLL + Sbjct: 79 VLGWMVELLQSFFLIADDIMDASKTRRGQPCWYLMPG-VGNIAINDAFMVESAIYFLLKK 137 Query: 117 AF----CMV--IE-----TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVI 165 F C V IE T E + L L+ +L + SL K + ++ Sbjct: 138 HFRQESCYVDLIELFHDVTFQTELGQQLDLLTAPEDSVDLSKFSLQK--------HSFIV 189 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVR-QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 KTA F + ++ +AGV + + + LG FQ+ DD LD G+ GK Sbjct: 190 IYKTAFYSFYLPVALAMHLAGVATPENLKCAQDILIILGKYFQVQDDYLDCYGDPTVTGK 249 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREK 250 IG D + K + + LA + T ++ Sbjct: 250 -IGTDILDNKCSWIINLALAKCTPEQR 275 >gi|146299748|ref|YP_001194339.1| integral membrane sensor signal transduction histidine kinase [Flavobacterium johnsoniae UW101] gi|146154166|gb|ABQ05020.1| integral membrane sensor signal transduction histidine kinase [Flavobacterium johnsoniae UW101] Length = 730 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 9/135 (6%) Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSAL--RRGKVAARLVWGNQTSVLVGDFLL 114 LEY+ DN ++L I + L D D++++ ++GK + NQ V+V LL Sbjct: 189 LEYKDDNEIILGSYINIGDIYSKLKD--YDNASIFYKKGKALSEKTNNNQGRVIV---LL 243 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLF 173 ++ K QEAL+ + EL QLS+ + + Y+ + K A ++F Sbjct: 244 GLGENYQLQKKHQEALKMFQEALAIADKSELNQLSIVSRSSIG-DTYISLKKYNEAKLIF 302 Query: 174 SAALEVSSLIAGVQN 188 S AL+ S +QN Sbjct: 303 SEALQKSVHFGLLQN 317 >gi|242077482|ref|XP_002448677.1| hypothetical protein SORBIDRAFT_06g031320 [Sorghum bicolor] gi|241939860|gb|EES13005.1| hypothetical protein SORBIDRAFT_06g031320 [Sorghum bicolor] Length = 329 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 11/134 (8%) Query: 163 HVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 H +K KT+ F + + L+ G + L+ + +GI FQ DD LD + N + Sbjct: 172 HNVKYKTSYYSFYLPVACALLLCGTKLENISGLRDVLIEMGIYFQAQDDYLDCFADPNTI 231 Query: 222 GKNIGEDFRNGKPTLPVILAFQRGTKRE-----KNFWKSTINDGKISVENLKKAFIIMRE 276 GK IG D + K + ++ A E KN+ K SV +K + + Sbjct: 232 GK-IGTDIEDHKCSWLIVQALSHANSNEIEVLLKNYGKKD----STSVSKVKNTYSTLDL 286 Query: 277 NRALVDTEYRAYSY 290 + E RAY + Sbjct: 287 KDIFSEFEDRAYKH 300 >gi|78191057|gb|ABB29853.1| geranyl-geranyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana sanderae] Length = 91 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 29/51 (56%) Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 L+ + +G+ FQ+VDD+LD ++GK G+D K T P ++ ++ Sbjct: 2 LRKFARCIGLLFQVVDDILDVTKSSQQLGKTAGKDLVADKVTYPKLIGIEK 52 >gi|254566651|ref|XP_002490436.1| Farnesyl pyrophosphate synthetase [Pichia pastoris GS115] gi|238030232|emb|CAY68155.1| Farnesyl pyrophosphate synthetase [Pichia pastoris GS115] gi|328350830|emb|CCA37230.1| dimethylallyltranstransferase [Pichia pastoris CBS 7435] Length = 354 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 24/186 (12%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGD-FLLSQAFCMVIE- 123 +L +E + L+ DD++D S RRG+ V N ++ + D F+L A ++ Sbjct: 86 ILGWCVELLQAYFLVADDMMDQSITRRGQPCWYKV-ENVGNIAINDSFMLEGAIYKILRK 144 Query: 124 --TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-----VLFSAA 176 K + L L+ + EL QL +L ED++ + K A V+F A Sbjct: 145 YFKKESYYADLLDLLHEVTFQTELGQLL---DLITAPEDHVDLSKFTPAKHSFIVIFKTA 201 Query: 177 LE-------VSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 ++ ++G+ + ++QA + + LG FQ+ DD LD G+ ++GK IG Sbjct: 202 YYSFYLPVVMAMYLSGITHEKDLQQA-EHILIPLGEYFQIQDDYLDCFGKPEDIGK-IGT 259 Query: 228 DFRNGK 233 D ++ K Sbjct: 260 DIQDNK 265 >gi|170096356|ref|XP_001879398.1| predicted protein [Laccaria bicolor S238N-H82] gi|164645766|gb|EDR10013.1| predicted protein [Laccaria bicolor S238N-H82] Length = 364 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 28/192 (14%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +L IE + L+ DD++D S RR + + + F+L A +++T Sbjct: 80 VLGWCIELLQAFFLVSDDIMDSSITRRSQPCWYRLPEIGMIAINDSFILEAAIYQLLKTH 139 Query: 126 SQEA---LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK-----SKTAVLFSAA- 176 + ++ L L T + E+ QL +L ED++ + K ++ V++ A Sbjct: 140 FRSEKFYVDLLELFHETTYQTEMGQLV---DLITAPEDHVDLNKFSLDRHRSIVIYKTAY 196 Query: 177 ---------------LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 + S +GV + KS + LG FQ+ DD LDY ++ Sbjct: 197 YSFYLPVACALHLLNIPESYTASGVTQKPYEISKSILLPLGEYFQIQDDFLDYSAPSEQL 256 Query: 222 GKNIGEDFRNGK 233 GK IG D + K Sbjct: 257 GK-IGTDIIDNK 267 >gi|30984142|dbj|BAC53873.2| farnesyl pyrophosphate synthase [Phaseolus lunatus] Length = 243 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 35/232 (15%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR---LVWGNQTSVLVGDF 112 L IE++ L+ DD++D+S RRG+ +AA L+ + +L F Sbjct: 15 LGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILKKHF 74 Query: 113 LLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLH--VI 165 + +++ ++ + S L+ E +L + +L+ LH ++ Sbjct: 75 RGKPYYVDLLDLFNEVEFQTASGQMIDLITTLQGEKDLSKYTLT----------LHRRIV 124 Query: 166 KSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 + KTA F + + L+AG +K+ + +G FQ+ DD LD G+ +GK Sbjct: 125 QYKTAYYSFYLPVACALLMAGDNLDNHVDVKNILVEMGTYFQVQDDYLDCFGDPETIGK- 183 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 IG D + K + V A + +++K N G EN+ K + E Sbjct: 184 IGTDIEDFKCSWLVAKALELSNEQQKKVLYD--NYGNPDPENVAKVKALYNE 233 >gi|12082285|dbj|BAB20883.1| GGPP synthase [Taraxacum japonicum] Length = 127 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 13/125 (10%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSLVACT-----L 140 RRGK V+G +VL GD LL+ AF + + L A+ +A + L Sbjct: 4 FRRGKPTNHKVYGEDVAVLAGDSLLAFAFQHIASATVGASPARVLAAVGELAKSIGTEGL 63 Query: 141 AEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++ ++ + DV E +++H+ KTA L AA+ + +++ G ++ + L+ + Sbjct: 64 VAGQVVDIASTGAKDVGLEQLEFIHI--HKTAALLEAAVVLGAIVGGGSDTQVEKLRKFA 121 Query: 199 MNLGI 203 +G+ Sbjct: 122 RCIGL 126 >gi|67619073|ref|XP_667626.1| farnesyl pyrophosphate synthase [Cryptosporidium hominis TU502] gi|54658782|gb|EAL37400.1| farnesyl pyrophosphate synthase [Cryptosporidium hominis] Length = 353 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 18/190 (9%) Query: 42 GKRLR-PMLTLATALMLEY---RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAA 97 GK +R +L L ++L Y + D+ LL +E I L+ DD++D RRG Sbjct: 56 GKHIRGKILVLISSLSSAYSNIKRDSIYLLGWVVEAIQALILIADDIMDSGKFRRGAPCW 115 Query: 98 RLVWGNQTSV----------LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQ 147 +V G ++ L F LS F I K Q+ +L Sbjct: 116 YIVHGQSNAINDIFFLKMLSLSLIFELSSVFGDDIVMKIQKIYNESIFFTVLGQHLDLSY 175 Query: 148 LSLSKNLDVTEEDYLHVIKSKTA-VLFSAALEVSSLIAGVQNSVRQ--ALKSYGMNLGIA 204 LSK +D E Y +++ KT+ F + ++ +Q S Q +++ LG Sbjct: 176 FDLSK-VDKISERYFSMVEMKTSRYTFYMPVFFGLTLSEIQVSSAQLNLIEAILYKLGEF 234 Query: 205 FQLVDDVLDY 214 +Q+ +DV DY Sbjct: 235 YQVHNDVSDY 244 >gi|322703753|gb|EFY95357.1| Farnesyl pyrophosphate synthetase [Metarhizium anisopliae ARSEF 23] Length = 347 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 24/202 (11%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGD-FLLSQAFCMVI 122 L E + L+ DD++D S RRGK W Q V + D F+L + +++ Sbjct: 80 LGWMTELLQAFFLVSDDMMDGSITRRGKPC----WYRQEGVGMIAINDAFILESSIYVLL 135 Query: 123 ET--KSQEA-LEALSLVACTLAEGELRQL-------SLSKNLD-VTEEDYLHVIKSKTA- 170 +S A ++ + L T + E+ QL NLD + Y ++ KTA Sbjct: 136 RKYFRSHPAYIDIVELFHETTFQTEMGQLCDLLTAPEDKVNLDNFSMTKYQFIVIYKTAY 195 Query: 171 --VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 AL + L +++QA + + LG FQ+ DD LD G +GK IG D Sbjct: 196 YSFYLPVALALHQLNLATPKNLKQA-EDILIPLGEYFQIQDDYLDNFGLPEHIGK-IGTD 253 Query: 229 FRNGKPTLPVILAFQRGTKREK 250 ++ K + V A + T ++ Sbjct: 254 IKDNKCSWLVNQALEIATPEQR 275 >gi|46367743|dbj|BAD15361.1| farnesyl diphosphate synthase [Lactarius chrysorrheus] Length = 381 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 97/255 (38%), Gaps = 42/255 (16%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE-- 123 +L A+E++ L+ DD++D S RRG+ G + +L A +I Sbjct: 100 VLGWAVEWMQAYFLVSDDIMDASITRRGQPCWYRTEGVGFMAINDALILEGAIFQMIRKH 159 Query: 124 -----------------TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIK 166 + E + + L+ +L + SLS++ + VI Sbjct: 160 FRKEPFYVDLIDLLHEVSYQTEMGQLVDLITAPEHSVDLSKFSLSRHSTI-------VIY 212 Query: 167 SKTAVLFSAALEVSSLIAGV----QNSVRQALKSYGMN----LGIAFQLVDDVLDYRGEV 218 F + +S L+ G QN ++ LG FQ+ DD LDY G Sbjct: 213 KTAYYSFYLPVALSLLLCGFPAEKQNETDPDFYKIALDILVPLGEYFQIQDDYLDYSGTP 272 Query: 219 NEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE---NLKKAFIIMR 275 ++GK IG D + K + + A R ++ + N G+ E +K F+ + Sbjct: 273 EQIGK-IGTDIVDNKCSWCINTALARANPAQRAILDA--NYGRKDPEAEARVKTVFVELG 329 Query: 276 ENRALVDTEYRAYSY 290 + V EY A SY Sbjct: 330 VD--AVYAEYEAASY 342 >gi|66357330|ref|XP_625843.1| farnesyl pyrophosphate synthase [Cryptosporidium parvum Iowa II] gi|46226968|gb|EAK87934.1| putative farnesyl pyrophosphate synthase [Cryptosporidium parvum Iowa II] Length = 384 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 24/219 (10%) Query: 19 ILKRICSDVEMIPDVVKYLI------FSGGKRLR-PMLTLATALMLEY---RGDNHVLLA 68 +LK++ + E+ V++Y + GK +R +L L ++L Y + D+ LL Sbjct: 58 VLKKLPLNDEIRKPVIEYYLNCIDYNVKKGKHIRGKILVLISSLSSAYSNIKRDSIYLLG 117 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV----------LVGDFLLSQAF 118 +E I L+ DD++D RRG +V G ++ L F LS F Sbjct: 118 WVVEAIQALILIADDIMDSGKFRRGAPCWYIVHGQSNAINDIFFLKMLSLSLIFELSSVF 177 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA-VLFSAAL 177 I K Q+ +L LSK D E Y +++ KT+ F + Sbjct: 178 GNDIVMKIQKIYNESIFFTVLGQHLDLSYFDLSK-ADKISERYFSMVEMKTSRYTFYMPV 236 Query: 178 EVSSLIAGVQNSVRQ--ALKSYGMNLGIAFQLVDDVLDY 214 ++ +Q S Q +++ LG +Q+ +DV DY Sbjct: 237 FFGLTLSEIQVSSAQLNLIEAILYKLGEFYQVHNDVSDY 275 >gi|13383239|dbj|BAB39470.1| putative GGPP synthase 3 [Lactuca indica var. laciniata] Length = 127 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 64/125 (51%), Gaps = 13/125 (10%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSLVACT-----L 140 RRGK V+G +VL GD LL+ AF + + + L A+ +A + L Sbjct: 4 FRRGKPTNHKVYGEDVAVLAGDSLLAFAFQHIASATVGASPERVLAAVGELAKSIGTEGL 63 Query: 141 AEGELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++ ++ + K++ + + +++H+ KTA L AA+ + +++ G ++ + L+ + Sbjct: 64 VAGQVVDIASTGAKDVGLDQLEFIHI--HKTAALLEAAVVLGAILGGGSDTQVEKLRKFA 121 Query: 199 MNLGI 203 +G+ Sbjct: 122 RCIGL 126 >gi|254586445|ref|XP_002498790.1| ZYRO0G18634p [Zygosaccharomyces rouxii] gi|238941684|emb|CAR29857.1| ZYRO0G18634p [Zygosaccharomyces rouxii] Length = 348 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 21/200 (10%) Query: 50 TLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV 109 T AT L E + LL IE + L+ DD++D S RRG+ + + Sbjct: 65 TTATQLPSE-QYSKLALLGWCIELLQAYFLVADDMMDRSITRRGQPCWYKIEEVNEIAIN 123 Query: 110 GDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDV--TEEDYLHVIKS 167 F+L A ++++ + + LV L Q L + LD+ ED + + K Sbjct: 124 DAFMLEAAIYKLLKSHFRSEPYYIDLV--ELFHEVTFQTELGQLLDLITAPEDKIDLSKF 181 Query: 168 KTA-----VLFSAA-------LEVSSLIAGVQNS--VRQALKSYGMNLGIAFQLVDDVLD 213 A V+F A + ++ +AG+ + ++QA + + LG FQ+ DD LD Sbjct: 182 SPAKHSFIVIFKTAYYSFYLPVALAMYVAGISDPKDLKQA-QDVLIPLGEYFQIQDDYLD 240 Query: 214 YRGEVNEMGKNIGEDFRNGK 233 G ++GK IG D ++ K Sbjct: 241 CYGTPEQIGK-IGTDIQDNK 259 >gi|157167319|ref|XP_001660253.1| candidate tumor suppressor protein [Aedes aegypti] gi|108882898|gb|EAT47123.1| candidate tumor suppressor protein [Aedes aegypti] Length = 453 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVA----ARLVWGNQTSVLVGDFLLSQAFCMVI 122 LA E I T++L+H +V+ L + +++GN+ ++L GD+LL A + Sbjct: 165 LAEVTEMIRTSSLVHQGLVNLQPLANAGNELSGDSEMIFGNKIALLSGDYLLGNACLQLA 224 Query: 123 ETKSQEALEALSLVACTLAE 142 K+QE +E +S LAE Sbjct: 225 GLKNQELIELISSSVRDLAE 244 >gi|145611940|ref|XP_369218.2| hypothetical protein MGG_00026 [Magnaporthe oryzae 70-15] gi|145616406|ref|XP_001403072.1| hypothetical protein MGG_14382 [Magnaporthe oryzae 70-15] gi|145010176|gb|EDJ94832.1| hypothetical protein MGG_14382 [Magnaporthe oryzae 70-15] gi|145019146|gb|EDK03425.1| hypothetical protein MGG_00026 [Magnaporthe oryzae 70-15] Length = 372 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 26/161 (16%) Query: 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLA 141 DDV D+S LRR A V+G +V + A +I S++ Sbjct: 137 DDVQDNSPLRRSNPATHTVFGMPQTVNSSVY----ATVDLIHRASEQ------------G 180 Query: 142 EGELRQLSLSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 + Q + ++LD+ T E+Y+ ++ KT LF + ++ Q +V Sbjct: 181 NAQAAQEVVGQSLDLLWTFEVSTPTFEEYMQMVDGKTGALFVMIYRIMVAVSPGQ-TVLP 239 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 AL+ + + LG FQ+ DD + K ED GK Sbjct: 240 ALERFTLLLGRYFQIRDDYANLASPDYSKAKGFCEDLDEGK 280 >gi|14625000|dbj|BAB61880.1| farnesyl diphosphate synthase [Rhodobacter azotoformans] Length = 137 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 12/129 (9%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLS 149 LRRG W T+VL GD L + AF ++ + A + LV + Sbjct: 12 LRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALGPAEVRIRLVETLARASGAEGMV 71 Query: 150 LSKNLDV---------TEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 L + LD+ T E H+ KT L + E +++ L+ Y Sbjct: 72 LGQALDIAAETAAVPLTLEQITHLQAGKTGALIRWSAEAGAILGQADTG---PLRRYATA 128 Query: 201 LGIAFQLVD 209 LG+AFQ+ D Sbjct: 129 LGLAFQVAD 137 >gi|227543002|ref|ZP_03973051.1| possible geranylgeranyl pyrophosphate synthase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181224|gb|EEI62196.1| possible geranylgeranyl pyrophosphate synthase [Corynebacterium glucuronolyticum ATCC 51866] Length = 365 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 29/200 (14%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRG-----KVAARLV-----------WGNQTSVL 108 L+ A + +HT + DDV+D RRG AA + +GN +VL Sbjct: 92 ALVGAAFDLVHTGLCIIDDVIDADHSRRGLKTIHATAAGIASPTIGTHAAAHYGNSIAVL 151 Query: 109 VGDFLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYL 162 +G L+ A +V + ++ + L+ GE + S D T Sbjct: 152 IGMSSLNAATSLVAKADMDPETTRRVIAELTTAVDDAIIGEFMDVEHSLPGHDPTPRQVD 211 Query: 163 HVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 + KT+ F A L +LIAG +V L+ +LG AF++ +D+ Sbjct: 212 NAALLKTSPYSFEAPLVCGALIAGRPVAVCDTLRVVARHLGAAFRMANDLRAL------T 265 Query: 222 GKNIGEDFRNGKPTLPVILA 241 G D RN + T ++LA Sbjct: 266 GNGFVGDIRNHRTTPLMVLA 285 >gi|297617610|ref|YP_003702769.1| hypothetical protein Slip_1441 [Syntrophothermus lipocalidus DSM 12680] gi|297145447|gb|ADI02204.1| hypothetical protein Slip_1441 [Syntrophothermus lipocalidus DSM 12680] Length = 263 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 20/164 (12%) Query: 48 MLTLATALMLEYRGDN-----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWG 102 ML TAL+ YRG V + + A +HD V DD + RL Sbjct: 46 MLPQVTALV--YRGLKVGFRCTVYMVTIFRLAYLANHIHDMVGDDEEGQ--GYDGRL--- 98 Query: 103 NQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE-LRQLSLSKNLDVTEEDY 161 Q ++L+GD+L + ++ E SQ + + + EG +R++ D Sbjct: 99 -QFNILIGDYLFGRVLKLLSENDSQYLAHTFAEMIMEINEGRVIRKMKGGNKKD------ 151 Query: 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 L VI + A L+ A +S++A + + + + G LG+A Sbjct: 152 LEVIAKEKATLYKNAFLTASMVANLPAAEQLIYREVGNKLGLAL 195 >gi|227488390|ref|ZP_03918706.1| hypothetical protein HMPREF0294_1540 [Corynebacterium glucuronolyticum ATCC 51867] gi|227091604|gb|EEI26916.1| hypothetical protein HMPREF0294_1540 [Corynebacterium glucuronolyticum ATCC 51867] Length = 365 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 29/200 (14%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRG---------KVAARLV-------WGNQTSVL 108 L+ A + +HT + DDV+D RRG +A+ + +GN +VL Sbjct: 92 ALVGAAFDLVHTGLCIIDDVIDADHSRRGLKTIHATATGIASPTIGTHAAAHYGNSIAVL 151 Query: 109 VGDFLLSQAFCMVIET-----KSQEALEALSLVACTLAEGELRQLSLS-KNLDVTEEDYL 162 +G L+ A +V + ++ + L+ GE + S D T Sbjct: 152 IGMSSLNAATSLVAKADMDPETTRRVIAELTTAVDDAIIGEFMDVEHSLPGHDPTPRQVD 211 Query: 163 HVIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEM 221 + KT+ F A L +LIAG +V L+ +LG AF++ +D+ Sbjct: 212 NAALLKTSPYSFEAPLVCGALIAGRPVAVCDTLRVVARHLGAAFRMANDLRAL------T 265 Query: 222 GKNIGEDFRNGKPTLPVILA 241 G D RN + T ++LA Sbjct: 266 GNGFVGDIRNHRTTPLMVLA 285 >gi|25452946|sp|O24242|FPPS2_PARAR RecName: Full=Farnesyl pyrophosphate synthase 2; Short=FPP synthase 2; Short=FPS 2; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2; AltName: Full=Dimethylallyltranstransferase 2; AltName: Full=Farnesyl diphosphate synthase 2; AltName: Full=Geranyltranstransferase 2 gi|1532052|emb|CAA57893.1| farnesyl diphosphate synthase [Parthenium argentatum] Length = 342 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 29/204 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGK-----------VAAR--LVWGNQTSVLVGDFL 113 L +E++ L+ DD++D+S RRG+ +AA ++ N ++ Sbjct: 78 LGWCVEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGIILRNHVPRILKKHF 137 Query: 114 LSQAFCMVI-----ETKSQEAL-EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 + + + + E + Q A + + L+ + E +L + SLS + +++ Sbjct: 138 RGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSI--------HRRIVQY 189 Query: 168 KTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 KTA F + + L+ G +K+ + +G FQ+ DD LD G +GK IG Sbjct: 190 KTAYYSFYLPVACALLMFGEDLEKHVEVKNVLVEMGTYFQVQDDYLDCFGAPEVIGK-IG 248 Query: 227 EDFRNGKPTLPVILAFQRGTKREK 250 D + K + V+ A + + +K Sbjct: 249 TDIEDFKCSWLVVKALELANEEQK 272 >gi|330806139|ref|XP_003291031.1| hypothetical protein DICPUDRAFT_38391 [Dictyostelium purpureum] gi|325078828|gb|EGC32459.1| hypothetical protein DICPUDRAFT_38391 [Dictyostelium purpureum] Length = 366 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 63/268 (23%), Positives = 107/268 (39%), Gaps = 50/268 (18%) Query: 41 GGKRLRPMLTLATALMLEYRG----DNHVLL-----ACAIEFIHTATLLHDDVVDDSALR 91 GGK +R + L T + +++G D + IEF+ + L+ DD++D +R Sbjct: 55 GGKYMRGLSVLNT--IKDFKGVEQLDEETIFLGRVAGWCIEFLQASLLIADDIMDGGIMR 112 Query: 92 RGKVAARLVWGNQTSVL----------VGDFLLSQAF----CMVIETKS--------QEA 129 R R W + + L +G ++ AF C+ I K E Sbjct: 113 RD----RPCWHHYPNPLIKNLNGVEQPIGKIAVNDAFIMESCIYILLKKYFREKPYYTEM 168 Query: 130 LEALSLVACTLAEGELRQLSLSKNL--DVTE---EDYLHVIKSKTAVLFSAALEVS--SL 182 LE ++ G+L S +L D + +++ H ++ KTA +S + V+ L Sbjct: 169 LELFHEISHNTFLGQLIDTSACHSLKGDFSSFNLKNFFHTVRFKTA-YYSLYIPVALGML 227 Query: 183 IAGVQ--NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + G+ + A+K + +G DD LD MGK +G D K + + Sbjct: 228 MCGINYLDPQYDAMKELLLEIGEYMNAQDDYLDCYELPENMGK-VGTDIEENKRSFLICQ 286 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLK 268 A T + K N G + EN+K Sbjct: 287 ALNYATPEQIEELKK--NYGIDNPENVK 312 >gi|154320702|ref|XP_001559667.1| hypothetical protein BC1G_01823 [Botryotinia fuckeliana B05.10] gi|150853512|gb|EDN28704.1| hypothetical protein BC1G_01823 [Botryotinia fuckeliana B05.10] Length = 265 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 49/222 (22%), Positives = 94/222 (42%), Gaps = 30/222 (13%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE------T 124 ++ IH +L DDV D+S LR+G++AA ++G ++ ++A+ + E + Sbjct: 1 MDAIHFGAILVDDVADNSHLRKGRIAAHRIYGTAETI-------NRAYLRIFEVIEKCRS 53 Query: 125 KSQEALEALSLVACTLAEGE-----LRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAAL 177 A+ A+ + +G+ R+ K LD Y KT LF Sbjct: 54 AKPSAIPAILDNLTQIHKGQDESLVWRRDGFDKGLDRAAALTRYRECASLKTGALFRL-- 111 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLD-YRGEVNEMGKNIGEDFRNGKPTL 236 + L G + L S + G QL +D + + +V + ED NG+ + Sbjct: 112 -IGQLATGSHE--KDQLMS---DFGWYCQLQNDCKNVFSSDVVAAKGALAEDLANGEYSF 165 Query: 237 PVILAFQRGTKREKNFWKS-TINDGKISVENLKKAFIIMREN 277 P+++A + + K+ + G E++ A +I++E+ Sbjct: 166 PILVALYSSPRIKTAVEKALSARQGGEFKEHVHNAAMILQED 207 >gi|126348819|ref|XP_001373435.1| PREDICTED: similar to farnesyl pyrophosphate synthetase (EC 2.5.1.1), partial [Monodelphis domestica] Length = 259 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 92/222 (41%), Gaps = 42/222 (18%) Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV---LVGDFLLSQA--------FCM-- 120 + L+ DD++D S RRG+ W + + D +L +A FC Sbjct: 1 VQAFFLVADDIMDSSLTRRGQPC----WYKSPGIGLDAINDAMLLEACVYRLLKHFCRGQ 56 Query: 121 -----VIE-----TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170 +IE T E + L L+ + +L + E+ Y ++K KTA Sbjct: 57 PYYLNLIELFLQCTYQTEIGQTLDLITAPQGKVDLTRFE--------EKRYKTIVKYKTA 108 Query: 171 VLFSAALEVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 +S L +S +AG+ K+ + +G FQ+ DD LD G+ + GK IG Sbjct: 109 -FYSFYLPFASAMYMAGIDGEKEHTNAKNILLEMGEFFQIQDDYLDLFGDPSMTGK-IGT 166 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 D ++ K + V+ + Q + ++ + N G+ E + K Sbjct: 167 DIQDNKCSWLVVKSLQLASPEQRKILEE--NYGQNDPEKIAK 206 >gi|327267931|ref|XP_003218752.1| PREDICTED: transmembrane and TPR repeat-containing protein 4-like [Anolis carolinensis] Length = 1404 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 5/77 (6%) Query: 149 SLSKNLDVTEEDYLHVIKSKT-----AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 S + +L + +++ +V+K+KT A E+ +L+ Q + +A K + GI Sbjct: 52 SYTAHLPMPDKEKHYVLKTKTKVRERAYTVQPKSELENLLPNEQQTKEEADKHLEYHQGI 111 Query: 204 AFQLVDDVLDYRGEVNE 220 AFQ VDDVLD + + N+ Sbjct: 112 AFQSVDDVLDEKPQKND 128 >gi|169842470|ref|ZP_02875575.1| hypothetical protein cdivTM_35209 [candidate division TM7 single-cell isolate TM7a] Length = 44 Score = 37.4 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 17/34 (50%), Positives = 22/34 (64%) Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 Q + Y LGIAFQ+ DD+LD G E+GKN+ Sbjct: 6 QKMVEYSKLLGIAFQIKDDILDIEGNFEEIGKNL 39 >gi|257094812|ref|YP_003168453.1| squalene synthase HpnD [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047336|gb|ACV36524.1| squalene synthase HpnD [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 277 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 24/158 (15%) Query: 82 DDVVDDSALRRGKVAA-RLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTL 140 DDVVD+ + ++AA +L W Q LS + + +AL+A S L Sbjct: 44 DDVVDEC--QDPQIAATKLAWWRQE--------LSGLYAGKPQHPVTQALQAAS-GEFHL 92 Query: 141 AEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMN 200 E +L+++ +D+ + YL K+ + + A V L A + + + Y + Sbjct: 93 PEEQLQEIIDGMAMDLQQTRYLD-FKALSLYCYRVASVVGLLAAEIFGYQDRKTQKYAHD 151 Query: 201 LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 LG+AFQL + + +++GED R G+ LP+ Sbjct: 152 LGLAFQLTNII-----------RDVGEDARMGRIYLPI 178 >gi|302686592|ref|XP_003032976.1| farnesyl-diphosphate synthase [Schizophyllum commune H4-8] gi|300106670|gb|EFI98073.1| farnesyl-diphosphate synthase [Schizophyllum commune H4-8] Length = 347 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 30/206 (14%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVW---GNQTSVLVGD-FLLSQAFCMV 121 +L +E + L+ DD++D S RRG+ W N + + D F+L A + Sbjct: 79 ILGWCVELLQAFFLVSDDIMDSSITRRGQPC----WYRTPNVGMIAINDAFMLEAAIYHL 134 Query: 122 IET--KSQE-ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH-----------VIKS 167 ++ KSQ +E L L T + E+ QL +L ED++ +++ Sbjct: 135 LKVHFKSQAYYVELLELFHETTHQTEMGQLI---DLITAPEDHVDLNRFSLKKHALIVQY 191 Query: 168 KTAVL-FSAALEVSSLIAGVQN--SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 KT+ F + ++ + G+ + + AL+ + LG FQ+ DD LDY +GK Sbjct: 192 KTSYYSFYLPVALAFHLCGITSPKAFETALEIL-LPLGEYFQIQDDYLDYHAPPEVLGK- 249 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREK 250 +G D + K + + A + T ++ Sbjct: 250 VGTDILDNKCSWCINKALEIATPAQR 275 >gi|330901422|gb|EGH32841.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 56 Score = 37.4 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 26/41 (63%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL 51 D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L Sbjct: 13 DFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVL 53 >gi|302852307|ref|XP_002957674.1| hypothetical protein VOLCADRAFT_98778 [Volvox carteri f. nagariensis] gi|300256968|gb|EFJ41223.1| hypothetical protein VOLCADRAFT_98778 [Volvox carteri f. nagariensis] Length = 340 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 32/201 (15%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 L IE++ L+ DD++D S RRG+ V + D++L I K Sbjct: 96 LGWCIEWLQAFFLVADDIMDGSITRRGQPCWYKV-PKVGMIACNDYILLDCCIYRILKKH 154 Query: 127 QEALEALSL-------VACTLAEGELRQLSLSK--NLDV---TEEDYLHVIKSKTAVLFS 174 + A + V + G+L L+ + ++D+ T+++YL ++ KTA +S Sbjct: 155 FRSHSAYAQLVDLFHEVTFQTSHGQLLDLTTAPIGSVDLAKYTQDNYLRIVTYKTA-YYS 213 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 L V+ GM L Q+ DD LD G+ +GK IG D + K Sbjct: 214 FYLPVAC----------------GMVLA-GIQIQDDYLDCCGDPEVIGK-IGTDIEDNKC 255 Query: 235 TLPVILAFQRGTKREKNFWKS 255 + V A Q + +K K+ Sbjct: 256 SWLVCTALQVASDEQKEVIKA 276 >gi|261196876|ref|XP_002624841.1| geranylgeranyl pyrophosphate synthase [Ajellomyces dermatitidis SLH14081] gi|239596086|gb|EEQ78667.1| geranylgeranyl pyrophosphate synthase [Ajellomyces dermatitidis SLH14081] Length = 702 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 20/196 (10%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 ++ A ++ L+ DDV D S RRG AA +++G ++ ++ + F ++ + K Sbjct: 444 VIETAAMMVYHNLLMVDDVQDGSQTRRGMPAAYILYGTNQTMNSATYVWVKIFELMAQLK 503 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTE---------EDYLHVIKSKTAVLFSAA 176 +A + + EL+ L L ++L++ DY ++ +K+ F Sbjct: 504 FADACRDILI-------DELKSLGLGQSLELHWRFHKLCPPISDYFVMVDNKSGSFFQLV 556 Query: 177 LEVSSLIAGVQNSVRQALK-SYGMN-LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + S A +N K S+ +N LG +Q+ +D + K +D GK Sbjct: 557 MRLMS--AESENPAAPDTKLSHFINLLGRYYQIWNDYQNLESSEYMAMKGFCDDLSEGKL 614 Query: 235 TLPVILAFQRGTKREK 250 ++ +I Q +++ Sbjct: 615 SIILIHTLQNSVAKDR 630 >gi|171693897|ref|XP_001911873.1| hypothetical protein [Podospora anserina S mat+] gi|170946897|emb|CAP73701.1| unnamed protein product [Podospora anserina S mat+] Length = 349 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 20/183 (10%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE--- 123 L E + L+ DD++D S RRGK G + F+L A +++ Sbjct: 82 LGWMTELLQAFFLVSDDIMDSSITRRGKPCWYRHEGVGMVAINDAFMLEAAIYTLLKKYF 141 Query: 124 ---TKSQEALEALSLVACTLAEGELRQLSLSK----NLD-VTEEDYLHVIKSKTAVLFSA 175 + + LE V G+L L + NLD + E Y ++ KTA +S Sbjct: 142 RDHPRYVDLLELFHEVTFQTEMGQLCDLLTAPEDVVNLDNFSMEKYRFIVIYKTAY-YSF 200 Query: 176 ALEVSSL-----IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L V+ IA N ++QA +S + LG FQ+ DD LD G +GK IG D Sbjct: 201 YLPVALSLLLLDIATPAN-LKQA-ESILIPLGEYFQIQDDYLDNFGLPEHIGK-IGTDIM 257 Query: 231 NGK 233 + K Sbjct: 258 DNK 260 >gi|85103549|ref|XP_961541.1| farnesyl pyrophosphate synthetase [Neurospora crassa OR74A] gi|67476924|sp|Q92250|FPPS_NEUCR RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|18376241|emb|CAD21355.1| farnesyl-pyrophosphate synthetase [Neurospora crassa] gi|28923088|gb|EAA32305.1| farnesyl pyrophosphate synthetase [Neurospora crassa OR74A] gi|206597129|dbj|BAG71669.1| farnesyl diohosphate synthase [Neurospora crassa] Length = 347 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 30/207 (14%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTS---VLVGD-FLLSQAFCMVI 122 L E + L+ DD++D S RRGK W Q V + D F+L A ++ Sbjct: 80 LGWMTELLQAFFLVSDDIMDSSITRRGKPC----WYRQEGVGMVAINDAFMLESAIYTLL 135 Query: 123 E------TKSQEALEALSLVACTLAEGELRQLSLSK----NLD-VTEEDYLHVIKSKTA- 170 + + + LE V G+L L + +LD + + Y ++ KTA Sbjct: 136 KKYFRSHPRYVDFLELFHEVTFQTEMGQLCDLLTAPEDKVDLDNFSMDKYTFIVIYKTAY 195 Query: 171 --VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228 AL + L +++QA + + LG FQ+ DD LD G +GK IG D Sbjct: 196 YSFYLPVALAMYMLDIATPENLKQA-EDILIPLGEYFQVQDDYLDNFGLPEHIGK-IGTD 253 Query: 229 FRNGK------PTLPVILAFQRGTKRE 249 ++ K L ++ QR T E Sbjct: 254 IQDNKCSWLVNKALSIVTPEQRKTLEE 280 >gi|153840450|ref|ZP_01993117.1| geranyltranstransferase [Vibrio parahaemolyticus AQ3810] gi|149745889|gb|EDM57019.1| geranyltranstransferase [Vibrio parahaemolyticus AQ3810] Length = 89 Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 27/50 (54%) Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 L+ Y +G+AFQ+ DD+LD + +GK G D K T P +L + Sbjct: 1 LERYSKAIGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPSLLGLE 50 >gi|125978361|ref|XP_001353213.1| GA10416 [Drosophila pseudoobscura pseudoobscura] gi|54641966|gb|EAL30715.1| GA10416 [Drosophila pseudoobscura pseudoobscura] Length = 449 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 67 LACAIEFIHTATLLHDDVVD-DSALRRGKVAAR---LVWGNQTSVLVGDFLLSQAFCMVI 122 LA E I + L+H+ VV+ S+ G+ AA + +GN+ +L GD+LL + + Sbjct: 166 LAEVTEMIRISHLVHNSVVNLQSSTEAGQDAATYDDMSFGNKIGLLTGDYLLGHSSAELA 225 Query: 123 ETKSQEALEALSLVACTLAEGEL 145 ++QE +E +S +E E Sbjct: 226 NLRNQEVVELISSAVRDFSESEF 248 >gi|194383898|dbj|BAG59307.1| unnamed protein product [Homo sapiens] Length = 297 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IH A L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161 + + +E L+ L +G + S SK + DY Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTSKAQEKGRLDY 243 >gi|13383247|dbj|BAB39474.1| putative GGPP synthase 3 [Metaplexis japonica] Length = 127 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 21/129 (16%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL-----SLVACTLAEGE 144 LRRGK V+G +VL GD LL+ AF ++ + E L L C +EG Sbjct: 4 LRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIVTATKGASSEQLVRVIEELAKCIGSEG- 62 Query: 145 LRQLSLSKNLDVTEE----------DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQAL 194 L + +D+ E +++H+ KTA L ++ + +++ G + L Sbjct: 63 ---LVAGQVVDICSEGISDVGLEHLEFIHL--HKTAALLEGSVVLGAILGGANDVQISKL 117 Query: 195 KSYGMNLGI 203 + + +G+ Sbjct: 118 RKFARCIGL 126 >gi|151944962|gb|EDN63217.1| FPP synthetase [Saccharomyces cerevisiae YJM789] Length = 352 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 22/216 (10%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +L IE + L+ DD++D S RRG+ V + F+L A ++++ Sbjct: 84 ILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIYKLLKSH 143 Query: 126 ---SQEALEALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTAVL-F 173 + ++ L + EL QL + +D+++ + + ++ KTA F Sbjct: 144 FRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSF 203 Query: 174 SAALEVSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + ++ +AG+ + ++QA + + LG FQ+ DD LD G ++GK IG D ++ Sbjct: 204 YLPVALAMYVAGITDEKDLKQA-RDVLIPLGEYFQIQDDYLDCFGTPEQIGK-IGTDIQD 261 Query: 232 GK------PTLPVILAFQRGTKREKNFWKSTINDGK 261 K L + A QR T E K ++ + K Sbjct: 262 NKCSWVINKALELASAEQRKTLDENYGKKDSVAEAK 297 >gi|78191049|gb|ABB29849.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana sanderae] Length = 234 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 31/220 (14%) Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVA--------------ARLVWGNQTSVLVGDFLLS 115 IE++ L+ DD++D+S RRG+ L+ + T +L F Sbjct: 8 CIEWLQAYFLVLDDIMDNSHTRRGQPCWYKLPKVGMIAVNDGILLRDHITRILKNHFRAK 67 Query: 116 QAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTA 170 + +++ ++ + S L+ + E +L + SL + +++ KTA Sbjct: 68 PYYVDLLDLFNEVEFQTASGQMVDLITTLVGEKDLSKYSLPT--------HRRIVQYKTA 119 Query: 171 VL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 F + + L+AG +K+ + +GI Q+ DD LD + +GK IG D Sbjct: 120 YYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYSQVQDDYLDCFADPEVLGK-IGTDI 178 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK 269 ++ K + V+ A + + +K N GK + E + K Sbjct: 179 QDFKCSWLVVKALEVCNEEQKKLLYE--NYGKDNPECIAK 216 >gi|323308567|gb|EGA61811.1| Erg20p [Saccharomyces cerevisiae FostersO] Length = 352 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 22/216 (10%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET- 124 +L IE + L+ DD++D S RRG+ V + F+L A ++++ Sbjct: 84 ILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIYKLLKSH 143 Query: 125 --KSQEALEALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTAVL-F 173 + ++ L + EL QL + +D+++ + + ++ KTA F Sbjct: 144 FRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSF 203 Query: 174 SAALEVSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + ++ +AG+ + ++QA + + LG FQ+ DD LD G ++GK IG D ++ Sbjct: 204 YLPVALAMYVAGITDEKDLKQA-RDVLIPLGEYFQIQDDYLDCFGTPEQIGK-IGTDIQD 261 Query: 232 GK------PTLPVILAFQRGTKREKNFWKSTINDGK 261 K L + A QR T E K ++ + K Sbjct: 262 NKCSWVINKALELASAEQRKTLDENYGKKDSVAEAK 297 >gi|6322294|ref|NP_012368.1| Erg20p [Saccharomyces cerevisiae S288c] gi|120479|sp|P08524|FPPS_YEAST RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|171517|gb|AAA34606.1| farnesyl diphosphate synthetase (EC 2.5.1.1) [Saccharomyces cerevisiae] gi|1008358|emb|CAA89462.1| ERG20 [Saccharomyces cerevisiae] gi|190409344|gb|EDV12609.1| farnesyl diphosphate synthetase [Saccharomyces cerevisiae RM11-1a] gi|207344136|gb|EDZ71372.1| YJL167Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256271340|gb|EEU06405.1| Erg20p [Saccharomyces cerevisiae JAY291] gi|285812738|tpg|DAA08636.1| TPA: Erg20p [Saccharomyces cerevisiae S288c] gi|290771068|emb|CAY80618.2| Erg20p [Saccharomyces cerevisiae EC1118] gi|323332955|gb|EGA74357.1| Erg20p [Saccharomyces cerevisiae AWRI796] gi|323337022|gb|EGA78278.1| Erg20p [Saccharomyces cerevisiae Vin13] gi|323348011|gb|EGA82269.1| Erg20p [Saccharomyces cerevisiae Lalvin QA23] Length = 352 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 22/216 (10%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET- 124 +L IE + L+ DD++D S RRG+ V + F+L A ++++ Sbjct: 84 ILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIYKLLKSH 143 Query: 125 --KSQEALEALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTAVL-F 173 + ++ L + EL QL + +D+++ + + ++ KTA F Sbjct: 144 FRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSF 203 Query: 174 SAALEVSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + ++ +AG+ + ++QA + + LG FQ+ DD LD G ++GK IG D ++ Sbjct: 204 YLPVALAMYVAGITDEKDLKQA-RDVLIPLGEYFQIQDDYLDCFGTPEQIGK-IGTDIQD 261 Query: 232 GK------PTLPVILAFQRGTKREKNFWKSTINDGK 261 K L + A QR T E K ++ + K Sbjct: 262 NKCSWVINKALELASAEQRKTLDENYGKKDSVAEAK 297 >gi|323304418|gb|EGA58189.1| Erg20p [Saccharomyces cerevisiae FostersB] Length = 352 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 22/216 (10%) Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET- 124 +L IE + L+ DD++D S RRG+ V + F+L A ++++ Sbjct: 84 ILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIYKLLKSH 143 Query: 125 --KSQEALEALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTAVL-F 173 + ++ L + EL QL + +D+++ + + ++ KTA F Sbjct: 144 FRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSF 203 Query: 174 SAALEVSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 + ++ +AG+ + ++QA + + LG FQ+ DD LD G ++GK IG D ++ Sbjct: 204 YLPVALAMYVAGITDEKDLKQA-RDVLIPLGEYFQIQDDYLDCFGTPEQIGK-IGTDIQD 261 Query: 232 GK------PTLPVILAFQRGTKREKNFWKSTINDGK 261 K L + A QR T E K ++ + K Sbjct: 262 NKCSWVINKALELASAEQRKTLDENYGKKDSVAEAK 297 >gi|205363969|gb|ACI04497.1| CrtE [uncultured bacterium] Length = 351 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IET 124 LA +E +H +L+ DD+ D+S RRG A + G ++ G++L A+ ++ I+ Sbjct: 84 LALIVEVLHAGSLIVDDIQDESEERRGGPALHQIHGVPLALNAGNWLYFWAYALLGEIDL 143 Query: 125 KSQEALEALSLVACTL 140 + A+ A LV L Sbjct: 144 PDEAAVRAHRLVTRAL 159 >gi|323354370|gb|EGA86209.1| Erg20p [Saccharomyces cerevisiae VL3] Length = 322 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 22/217 (10%) Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 +L IE + L+ DD++D S RRG+ V + F+L A ++++ Sbjct: 52 AILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIYKLLKS 111 Query: 125 ---KSQEALEALSLVACTLAEGELRQL-----SLSKNLDVTE---EDYLHVIKSKTAVL- 172 + ++ L + EL QL + +D+++ + + ++ KTA Sbjct: 112 HFRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYS 171 Query: 173 FSAALEVSSLIAGV--QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 F + ++ +AG+ + ++QA + + LG FQ+ DD LD G ++GK IG D + Sbjct: 172 FYLPVALAMYVAGITDEKDLKQA-RDVLIPLGEYFQIQDDYLDCFGTPEQIGK-IGTDIQ 229 Query: 231 NGK------PTLPVILAFQRGTKREKNFWKSTINDGK 261 + K L + A QR T E K ++ + K Sbjct: 230 DNKCSWVINKALELASAEQRKTLDENYGKKDSVAEAK 266 >gi|322793602|gb|EFZ17061.1| hypothetical protein SINV_02858 [Solenopsis invicta] Length = 343 Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust. Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 39/260 (15%) Query: 19 ILKRICSDVEMIPDVVKYL--IFSGGKRLRPMLTLATALMLEYRGDNHV----------- 65 I++ + V+ IPD+ K+L +F P L T L Y+ + Sbjct: 27 IMRDVTERVKNIPDIGKWLEKVFQYNVLETPKLHSLT-LFYAYKSIAPIEDQTEENIHLA 85 Query: 66 -LLACAIEFIHTATLLHDDVVDDSALRRGKV-------AARLVWGNQTSVL--VGDFLLS 115 +LA E + L+ DD++D S++RRGK L+ N ++L +G +LL Sbjct: 86 RILAWCTEVVRYLILI-DDIMDQSSIRRGKTCWYRHDDTTDLMAINDATMLESIGYYLLQ 144 Query: 116 QAFCMVIETKSQEALE--ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT---A 170 + F K +E A S ++ G+ + + T + Y+ +++K+ A Sbjct: 145 KYF------KRKECYNNIAESFQDVCISRGQFFDMKKCNLDEFTMDRYVITVQNKSGQLA 198 Query: 171 VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 L A + + + +S + +G +Q+ DD L +V +GK+ D Sbjct: 199 FLMPARAGIHYATTEKNGEMLKQTESILLEMGQFYQIQDDCLICFFDV--LGKDFN-DIA 255 Query: 231 NGKPTLPVILAFQRGTKREK 250 GK T ++ A +R T ++ Sbjct: 256 KGKFTWLIVKALERVTPEQR 275 >gi|119709588|dbj|BAF42691.1| geranylgeranyl diphosphate synthase-2-A-isoform [Nasutitermes takasagoensis] Length = 258 Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 14/177 (7%) Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEAL 130 IH + +L DD+ D++ LRRG A ++G +++ +LL + ++ AL Sbjct: 67 IIHHSCVLIDDIQDNTLLRRGIPVAHSIYGVASTLNTAIYLLLKGLKRAQILNNPDAIAL 126 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSSLIAGVQNS 189 L+ +G L N + E+Y+ +I+ K AV LF L +Q Sbjct: 127 CIEHLLDMYYGQG-LDICWRDNNTCPSLEEYMQMIQKKAAVWLFKIGL--------LQLL 177 Query: 190 VRQALKSYGMN--LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + +N L + Q+ DD + + + ED GK + P+I A +R Sbjct: 178 SDNKIDFTKLNSILAMYIQIRDDYCNLCLQQYTDERGYCEDITEGKLSFPIIHAIRR 234 >gi|119709590|dbj|BAF42692.1| geranylgeranyl diphosphate synthase-2-B-isoform [Nasutitermes takasagoensis] Length = 316 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 14/177 (7%) Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF--CMVIETKSQEAL 130 IH + +L DD+ D++ LRRG A ++G +++ +LL + ++ AL Sbjct: 67 IIHHSCVLIDDIQDNTLLRRGIPVAHSIYGVASTLNTAIYLLLKGLKRAQILNNPDAIAL 126 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV-LFSAALEVSSLIAGVQNS 189 L+ +G L N + E+Y+ +I+ K AV LF L +Q Sbjct: 127 CIEHLLDMYYGQG-LDICWRDNNTCPSLEEYMQMIQKKAAVWLFKIGL--------LQLL 177 Query: 190 VRQALKSYGMN--LGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 + +N L + Q+ DD + + + ED GK + P+I A +R Sbjct: 178 SDNKIDFTKLNSILAMYIQIRDDYCNLCLQQYTDERGYCEDITEGKLSFPIIHAIRR 234 >gi|13383243|dbj|BAB39472.1| putative GGPP synthase 1 [Metaplexis japonica] Length = 127 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 13/125 (10%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAF-CMVIETKSQEALEALSLVA--------CTL 140 LRRGK V+G +VL GD LL+ AF + T E L+ + L Sbjct: 4 LRRGKPTNHKVFGEDVAVLAGDSLLAFAFEYIATATAGVEPARVLAAIGELAKSIGTEGL 63 Query: 141 AEGELRQLSLS--KNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++ LS + N+ + + +++H+ KTA L A++ + +++ G + L+ + Sbjct: 64 VAGQVVDLSCTGKSNVGLDQLEFIHI--HKTAALLEASVVLGAILGGGTQEEVEKLRRFA 121 Query: 199 MNLGI 203 +G+ Sbjct: 122 RCIGL 126 >gi|161610601|gb|ABX75047.1| farnesyl diphosphate synthase [Polygala tenuifolia] Length = 252 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 17/164 (10%) Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLH--VIKSKTAVL-FSAALEVSSLIAGVQ 187 + + L+ E +L + SLS LH +++ KTA F + + L+A Sbjct: 71 QMIDLITTLEGEKDLSKYSLS----------LHRRIVQYKTAYYSFYLPVACALLMANEN 120 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +K+ +++G FQ+ DD LD G+ +GK IG D + K + V+ A + K Sbjct: 121 LDNHVDIKNILVDMGTYFQVQDDYLDCFGDPETIGK-IGTDIEDFKCSWLVVKALELSNK 179 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRE-NRALVDTEYRAYSY 290 +K N GK N+ K + +E + V T+Y SY Sbjct: 180 EQKKALHE--NYGKPDAGNVAKVKALYKELDLEGVFTDYENKSY 221 >gi|322802276|gb|EFZ22672.1| hypothetical protein SINV_06205 [Solenopsis invicta] Length = 917 Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 15/155 (9%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAA----RLVWGNQTSVLVGDFLLSQAFCMVI 122 LA E I T+ L+H +V+ + G + + + +GN+ ++L GD+LLS + + Sbjct: 150 LAEITEMIRTSNLIHRGLVNINTKDTGSLESSELNNITFGNKIALLCGDYLLSNSCTEMA 209 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDV----TEEDYLHVIKSKT-------AV 171 K+Q+ L +S L + E ++N + E+ + ++ T Sbjct: 210 ALKNQDLLLLISAAVRDLCQAEFVSRRDNQNFPIPSIPPEDRTGYALREWTLLNTYGAGS 269 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 L + + + IAG + + +G +L +A+Q Sbjct: 270 LLGKSCQSTLKIAGHSKEIEEKGYEFGKHLALAWQ 304 >gi|296198927|ref|XP_002747056.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 2 [Callithrix jacchus] Length = 298 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA E IHTA L+H +V+ + L+ + + +GN+ ++L GDFLL+ A + + Sbjct: 148 LAEITELIHTALLVHRGIVNINELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207 Query: 126 SQEALEALSLVACTLAEGELRQLSLS 151 + + +E L+ L +G + S S Sbjct: 208 NTKVVELLASALMDLVQGVYHENSTS 233 >gi|10801560|dbj|BAB16693.1| GGPP synthase 1 [Nicotiana tabacum] Length = 127 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 13/125 (10%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVACT-----L 140 LRRGK V+G +VL GD LL+ AF + + L A+ +A + L Sbjct: 4 LRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIAAATAGVSPSRILAAIGELAKSIGTEGL 63 Query: 141 AEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++ ++ + N +V + +++H+ KTA L A++ + +++ G + L+ + Sbjct: 64 VAGQVADIACTGNPNVGLDTLEFIHI--HKTAALLEASVVLGAILGGGTGEEVEKLRRFA 121 Query: 199 MNLGI 203 +G+ Sbjct: 122 RCIGL 126 >gi|13383253|dbj|BAB39477.1| putative GGPP synthase 2 [Youngia japonica] Length = 127 Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 13/125 (10%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV----IETKSQEALEALSLVACT-----L 140 RRGK V+G +VL GD L + AF + + L A+ +A + L Sbjct: 4 FRRGKPTNHKVYGEDVAVLAGDSLFAFAFQHIASATVGASPARVLAAVGELAKSIGTEGL 63 Query: 141 AEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++ ++ + DV E +++H+ KTA L AA+ + +++ G ++ + L+++ Sbjct: 64 VAGQVVDIASTGVKDVGLEQLEFIHI--HKTAALLEAAVVLGAILGGGSDTQVEELRTFA 121 Query: 199 MNLGI 203 +G+ Sbjct: 122 RCIGL 126 >gi|4115416|dbj|BAA36347.1| farnesyl diphosphate synthase [Oryza sativa Japonica Group] Length = 186 Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 2/89 (2%) Query: 164 VIKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMG 222 +++ KT+ F + + L++G + A++ + +GI FQ+ DD LD G+ +G Sbjct: 30 IVQYKTSYYSFYLPVACALLLSGEDLTKYGAVEDILVKMGIYFQVQDDYLDCYGDPKFIG 89 Query: 223 KNIGEDFRNGKPTLPVILAFQRGTKREKN 251 K IG D + K + V+ A +R + +K+ Sbjct: 90 K-IGTDIEDYKCSWLVVQALERADESQKS 117 >gi|10801562|dbj|BAB16694.1| GGPP synthase 2 [Nicotiana tabacum] Length = 127 Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 13/125 (10%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS----QEALEALSLVACT-----L 140 LRRGK V+G +VL GD LL+ AF + + L A+ +A + L Sbjct: 4 LRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIATATAGVSPSRILAAIGELAKSIGTEGL 63 Query: 141 AEGELRQLSLSKNLDVTEE--DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 G++ ++ + N +V + +++H+ KTA L A++ + +++ G + + L+ + Sbjct: 64 VAGQVADIACTGNPNVGLDTLEFIHI--HKTAALLEASVVLGAILGGGTDEEVEKLRIFA 121 Query: 199 MNLGI 203 +G+ Sbjct: 122 RCIGL 126 >gi|159480116|ref|XP_001698130.1| hypothetical protein CHLREDRAFT_177059 [Chlamydomonas reinhardtii] gi|158273628|gb|EDO99415.1| predicted protein [Chlamydomonas reinhardtii] Length = 794 Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 14/112 (12%) Query: 18 LILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTA 77 L R+C +E++ ++ +++ GG +P+L L T L D + +A + ++H Sbjct: 586 LTPPRLCLVMELMETSLERMLYGGGPD-QPLLPLGTVL------DIALDVAQGLSYLHP- 637 Query: 78 TLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 T++H D L+ G V L G + + DF LS+ V+ET++ EA Sbjct: 638 TIVHRD------LKPGNVLVNLNGGKRLIAKLSDFGLSRIQRTVVETENPEA 683 >gi|312861915|gb|ADR10437.1| farnesyl pyrophosphate synthase [Withania somnifera] Length = 343 Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust. Identities = 61/283 (21%), Positives = 119/283 (42%), Gaps = 50/283 (17%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRR------------GKVAAR---LVWGNQTSVLVGD 111 L IE++ L+ DD++D+S R G +A L+ + +L Sbjct: 78 LGWCIEWLQAYFLVLDDIMDNSHTRPRSTNAGTKLQKIGMIAVNDGILLHNHIPKILKNH 137 Query: 112 FLLSQAFCMVIETKSQEALEALS-----LVACTLAEGELRQLSLSKNLDVTEEDYLH--V 164 F + +++ +E + S L+ + + +L + SL +H + Sbjct: 138 FRPKPYYVDLLDLFPEEEFQTASGQMIDLITTLVGKKDLSKYSLP----------IHRRI 187 Query: 165 IKSKTAVL-FSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGK 223 ++ KTA F + L+AG +K +++GI FQ+ DD LD + +GK Sbjct: 188 VQYKTAYYSFYLPGACALLMAGENLDNHVDVKHILIDMGIYFQVQDDYLDCFADPKVLGK 247 Query: 224 NIGEDFRNGKPTLPVILAFQRGTKREK-----NFWKSTINDGKISVENLKKAFIIMRENR 278 IG D ++ K + V+ A + + +K N+ KS V N+K + ++ Sbjct: 248 -IGTDIQDFKCSWLVVKALELCNEEQKKLLHENYGKS----DPACVANVKALYNDLKLED 302 Query: 279 ALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 ++ E + Y +K +S+ P K++ EV+ L+++ Sbjct: 303 VYLEYEEKTY---EKLMNSIDAHP----SKTVQEVLKSFLEKI 338 >gi|242012483|ref|XP_002426962.1| hexaprenyl pyrophosphate synthetase, putative [Pediculus humanus corporis] gi|212511191|gb|EEB14224.1| hexaprenyl pyrophosphate synthetase, putative [Pediculus humanus corporis] Length = 383 Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust. Identities = 58/266 (21%), Positives = 111/266 (41%), Gaps = 33/266 (12%) Query: 67 LACAIEFIHTATLLHDDVVD--DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 LA E I T+ L+H +V+ V + +GN+ ++L GD+LL A + Sbjct: 126 LAEVTEMIRTSHLVHKGLVNIYPGLYSETSVLNDMTFGNKIALLSGDYLLGNACAELAGL 185 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKN----------LDVTEEDYLHVIKSKTAVLFS 174 ++Q +E +S L EGE +N EE L + S ++L Sbjct: 186 RNQSLVELMSSAIRDLTEGEFIGPRDKQNNPMPSPPGPPGTAMEEWTLRNVLSAGSLL-G 244 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + + + G ++ +G +L +A+Q D+ + E + G P Sbjct: 245 KSCQGTLQLGGHGPKFQEQGFCFGKHLALAWQACLDLEPFLPE---------SQYSKGNP 295 Query: 235 ----TLPVILAFQRGTKREKNFWKSTINDGKISVENL--KKAFIIMRENRALVDTEYRAY 288 + PV+L + + + ++ I GK SV ++ K I+ ++ A+ DT+ Sbjct: 296 FDLTSAPVLLHLE----YDPSLYRE-IEKGKGSVFDVDYTKLQEIISDSPAIEDTKNCKK 350 Query: 289 SYGQKAKDSLRCLPDSSWKKSLMEVV 314 + KA D L+ +S + +L ++ Sbjct: 351 VHSNKAMDVLQSFQESDARTALSNII 376 >gi|222630788|gb|EEE62920.1| hypothetical protein OsJ_17725 [Oryza sativa Japonica Group] Length = 183 Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 207 LVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGK 261 +VDD+LD E+GK GED + K T P +L G ++ + F + ++D + Sbjct: 120 IVDDILDVTKSSEEVGKTAGEDLASDKTTYPKLL----GLEKSRGFAEKLLSDAR 170 >gi|66529793|ref|XP_623861.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like [Apis mellifera] Length = 286 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 23/175 (13%) Query: 67 LACAIEFIHTATLLHDDVVD---DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 LA E I T+ L+H +V+ D ++ + +GN+ ++L GD+LL+ + + Sbjct: 31 LAEVTEMIRTSHLVHKGLVNIGSDVYFETSELN-DMNFGNKIALLSGDYLLANSCAELAN 89 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE------EDYLHVIKSKT--AVLFSA 175 ++Q+ +E +S LAE E ++N + +DY +K T VL + Sbjct: 90 LRNQDIVELMSSAVRDLAEAEFVGRRDNQNNPLPSIPPENCKDY--AVKEWTLRNVLSAG 147 Query: 176 ALEVSSL-----IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNI 225 AL S +AG N +++ ++G +L +A+Q D+ G N +NI Sbjct: 148 ALLGKSCKGTLKLAGHSNEIQEQGYNFGKHLALAWQACLDL----GPFNTKDQNI 198 >gi|1524295|emb|CAA65645.1| farnesyl pyrophosphate synthetase [Neurospora crassa] Length = 347 Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 34/209 (16%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM--VIET 124 L E + L+ DD++D S RRGK W Q VG ++ AF + I T Sbjct: 80 LGWMTELLQAFFLVSDDIMDSSITRRGKPC----WYRQEG--VGMVAINDAFMLESAIYT 133 Query: 125 KSQEALEA-------LSLVACTLAEGELRQLS--LSKNLDVTEED------YLHVIKSKT 169 + ++ + L L + E+ QL L+ D + D Y ++ KT Sbjct: 134 RLKKYFRSHPRYVDFLELFHEVTFQTEMGQLCDLLTAPEDKVDLDNFSMDKYTFIVIYKT 193 Query: 170 A---VLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIG 226 A AL + L +++QA + + LG FQ+ DD LD G +GK IG Sbjct: 194 AYYSFYLPVALAMYMLDIATPENLKQA-EDILIPLGEYFQVQDDYLDNFGLPEHIGK-IG 251 Query: 227 EDFRNGK------PTLPVILAFQRGTKRE 249 D ++ K L ++ QR T E Sbjct: 252 TDIQDNKCSWLVNKALSIVTPEQRKTLEE 280 >gi|158295164|ref|XP_316048.4| AGAP006015-PA [Anopheles gambiae str. PEST] gi|157015903|gb|EAA11709.4| AGAP006015-PA [Anopheles gambiae str. PEST] Length = 457 Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 20/136 (14%) Query: 67 LACAIEFIHTATLLHDDVVD----DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 LA E I TA L+H +V+ D A + ++GN+ ++L GD+LL A + Sbjct: 164 LAEITEMIRTAQLVHQGLVNLQSLDEAGNELGSDSDTIFGNKIALLSGDYLLGNACLQLA 223 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 ++Q +E +S S D+ E +++ + L S L+ + Sbjct: 224 GLRNQPLIELIS----------------SAVRDLAESNFIGERDQQNNPLPSCPLDCPGM 267 Query: 183 IAGVQNSVRQALKSYG 198 AG ++S + ++G Sbjct: 268 AAGGRDSEPEGAVNFG 283 >gi|12231184|dbj|BAB20976.1| putative GGPP synthase [Sonchus oleraceus] Length = 126 Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 17/109 (15%) Query: 90 LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV--IETK---SQEALEALS-LVACTLAEG 143 RRGK +V+G +VL GD LLS +F + + TK S L A+ L C +EG Sbjct: 4 FRRGKPTNHIVYGEDVAVLAGDALLSFSFEHIAYMATKGVSSDRILRAIGELAKCIGSEG 63 Query: 144 ELRQLSLSKNLDVTEE------DYLHVIK-SKTAVLFSAALEVSSLIAG 185 L + +D+ E D+L I KTA L ++ + +++ G Sbjct: 64 ----LVAGQVVDICSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGG 108 >gi|115928216|ref|XP_785706.2| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Strongylocentrotus purpuratus] gi|115934945|ref|XP_001190717.1| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Strongylocentrotus purpuratus] Length = 562 Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 44/262 (16%) Query: 72 EFIHTATLLHDDVVD----DSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 E IHTA L+H VV+ D A V + GN+ +VL GDFLL+ A + ++ Sbjct: 246 EMIHTAFLVHRGVVNLLNLDPATGPINV---MEMGNKMAVLSGDFLLASACKALAGLRNT 302 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTE-------------EDYLHVIKSKTAVLFS 174 +E +S L E + N D++ E Y++ + S T + S Sbjct: 303 TVVELISKAIGHLTEAAFMRFG---NADLSPIATIQPGLTFLDWERYVY-LSSGTLIGHS 358 Query: 175 --AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNG 232 ALE+++ ++ ++ +G N+ A QL ++ + + G D + Sbjct: 359 CRGALELTNH----SQALTESAYDFGKNIAWAQQLHTELQPFVSSSSPRGD---IDLTSA 411 Query: 233 KPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQ 292 PV+L + G + +S +N + ++KK +R++ AL + +Y Sbjct: 412 ----PVLLYLESGQGQ-----RSEVNSSR--KPDIKKLMREIRQSPALDKAKSLCLNYSD 460 Query: 293 KAKDSLRCLPDSSWKKSLMEVV 314 A L P S + +L +V Sbjct: 461 TALQGLSAFPASDSRTALQNMV 482 >gi|1160178|emb|CAA87327.1| farnesyl pyrophosphate synthetase like-4 [Homo sapiens] Length = 348 Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust. Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 22/222 (9%) Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +E + L+ DD++D S RRG++ G + LL +++ +E Sbjct: 87 VELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAIDDANLLEACIYPLLKLYCREQP 146 Query: 131 EALSLVACTLAEGELRQLSLSKNLDV-------------TEEDYLHVIKSKTAVLFSAAL 177 L+L+ L Q + + LD+ TE+ Y+ ++K KTA L S+ L Sbjct: 147 YYLNLIELFLQSS--YQTEIGQTLDLLTXPQGNVDLVRFTEKRYISIVKYKTA-LSSSYL 203 Query: 178 EVSS--LIAGVQNSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 +++ G+ A + +G Q+ DD L+ G+ + GK IG D ++ K Sbjct: 204 PIAAAXXXXGIVXEKEHANAXKILLEMGEFSQIQDDYLELFGDPSVTGK-IGTDIQDXKC 262 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRE 276 + R T + K N G+ E + + + E Sbjct: 263 NCLXVQCLXRATPEQYQILKE--NYGQKEAEKVPRVKALYEE 302 >gi|187955430|gb|AAI47754.1| Pdss2 protein [Mus musculus] gi|187955834|gb|AAI47753.1| Pdss2 protein [Mus musculus] Length = 264 Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQA 117 LA E IHTA L+H +V+ S L+ + + +GN+ ++L GDFLL+ A Sbjct: 149 LAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKIAILSGDFLLANA 200 >gi|194749103|ref|XP_001956979.1| GF24292 [Drosophila ananassae] gi|190624261|gb|EDV39785.1| GF24292 [Drosophila ananassae] Length = 453 Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 67 LACAIEFIHTATLLHDDVVD-DSALRRGKVAAR---LVWGNQTSVLVGDFLLSQAFCMVI 122 LA E I + L+H+ VV+ S+ + G+ A + +GN+ +L GD+LL + + Sbjct: 170 LAEVTEMIRISHLVHNSVVNLQSSTQAGQDVATFDDMSFGNKIGLLTGDYLLGHSSAELA 229 Query: 123 ETKSQEALEALSLVACTLAEGEL 145 ++QE +E +S +E E Sbjct: 230 NLRNQEVVELISSAVRDFSESEF 252 >gi|229543109|ref|ZP_04432169.1| Geranylgeranyl pyrophosphate synthase-like protein [Bacillus coagulans 36D1] gi|229327529|gb|EEN93204.1| Geranylgeranyl pyrophosphate synthase-like protein [Bacillus coagulans 36D1] Length = 289 Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 5/78 (6%) Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQ 206 Q + +N + EE+Y+ VIK K+ L + A +++AG + + Y +GI Q Sbjct: 114 QFADIRNAPLKEEEYIAVIKQKSGALCALACLCGAMLAGNTTDL-HLIGEYATGIGICAQ 172 Query: 207 L---VDDVLDYRGEVNEM 221 L +DDVL + GE N++ Sbjct: 173 LENDLDDVL-HLGEKNDL 189 >gi|12856514|dbj|BAB30693.1| unnamed protein product [Mus musculus] Length = 264 Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAAR-LVWGNQTSVLVGDFLLSQA 117 LA E IHTA L+H +V+ S L+ + + +GN+ ++L GDFLL+ A Sbjct: 149 LAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKIAILSGDFLLANA 200 >gi|138895709|ref|YP_001126162.1| Pre-ComX modifying enzyme [Geobacillus thermodenitrificans NG80-2] gi|196250964|ref|ZP_03149647.1| Polyprenyl synthetase [Geobacillus sp. G11MC16] gi|134267222|gb|ABO67417.1| Pre-ComX modifying enzyme [Geobacillus thermodenitrificans NG80-2] gi|196209528|gb|EDY04304.1| Polyprenyl synthetase [Geobacillus sp. G11MC16] Length = 310 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 121/254 (47%), Gaps = 21/254 (8%) Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ-AFCMVIETK 125 +A ++E + A + DD+VD +L A L + +G L Q A ++ Sbjct: 70 IAASVELMMLAGDMLDDLVDQDSLETTWNKAPLT--TSLHIAIGLLLAGQKAIVDLLIDD 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 ++A L + + L + + ++ ++ TE +Y+ ++K K+ L + A V + +AG Sbjct: 128 HKKAKAQLYISSRLLQSVNGQHMDVTYDIQ-TEAEYIEMVKKKSGSLVAMACFVGTALAG 186 Query: 186 VQ-NSVRQALKSYGMNLGIAFQLVDDV-LDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + N+V ++ Y ++GIA Q+ +D+ YR + KN D + K +LP++ + Sbjct: 187 AEKNTV--IIEKYANDIGIAAQIENDIDALYRWD----EKN---DIKAKKKSLPIL--YM 235 Query: 244 RGTKRE---KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +KR+ K ++ + ++ ++ V+ +K M + A + + Y +KA + Sbjct: 236 LTSKRDNLLKQYFSNHVDYNELYVQK-EKVIQQMEQEGAFYYAKVMSQIYKEKALQEIEK 294 Query: 301 LPDSSWKKSLMEVV 314 L + KS ++++ Sbjct: 295 LDVNDRYKSALKMI 308 Searching..................................................done Results from round 2 >gi|254780755|ref|YP_003065168.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040432|gb|ACT57228.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 322 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 322/322 (100%), Positives = 322/322 (100%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR Sbjct: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM Sbjct: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS Sbjct: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL Sbjct: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC Sbjct: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDSSWKKSLMEVVDFCLQRLN Sbjct: 301 LPDSSWKKSLMEVVDFCLQRLN 322 >gi|315121918|ref|YP_004062407.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495320|gb|ADR51919.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 322 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 268/322 (83%), Positives = 296/322 (91%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MKMLE LT+KDM KVN LI+ RICS+V +IPDVVKYLIFSGGKRLRPMLT+ATALMLEYR Sbjct: 1 MKMLEALTVKDMNKVNLLIMDRICSNVTIIPDVVKYLIFSGGKRLRPMLTVATALMLEYR 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+NHVLLACAIEFIHTATLLHDDVVDDSALRRGK AARLVWGNQ SVLVGDFLLSQAF M Sbjct: 61 GNNHVLLACAIEFIHTATLLHDDVVDDSALRRGKAAARLVWGNQASVLVGDFLLSQAFSM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 VIETKSQEAL+ LSLVACTL+EGELRQLS+SKNL+VTEEDYL+VIKSKTA LF AALEVS Sbjct: 121 VIETKSQEALKVLSLVACTLSEGELRQLSISKNLNVTEEDYLYVIKSKTAALFVAALEVS 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 SLI+G Q+SVR ALKSYG NLGIAFQLVDD LDYRGEVNEMGKNIG+DFRNGKPTLPVIL Sbjct: 181 SLISGAQDSVRDALKSYGTNLGIAFQLVDDALDYRGEVNEMGKNIGDDFRNGKPTLPVIL 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AFQR T +EKNFW+STI DG+ISVENL+KA I+++E ALVDT+ +AY YGQKAKDSL+ Sbjct: 241 AFQRATNQEKNFWRSTIGDGEISVENLQKALIMIQECNALVDTKSQAYYYGQKAKDSLQD 300 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP++ WK SL+EVVDFCLQRL+ Sbjct: 301 LPNNPWKASLIEVVDFCLQRLD 322 >gi|222085054|ref|YP_002543583.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter K84] gi|221722502|gb|ACM25658.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter K84] Length = 455 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 193/322 (59%), Positives = 250/322 (77%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V ++LI SGGKRLRPMLT+A+A + Y+ Sbjct: 134 IKPLVDLTKADMERVNQLILSKAGSDVQMIPEVAEHLISSGGKRLRPMLTIASAALYNYQ 193 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 194 GDNHIKLATSVEFLHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 253 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S EAL+ LS AC +AEGE+ QLS+SKN++ TE+DYL VI++KTA LFSAA EV Sbjct: 254 MVEVGSLEALDVLSSAACVIAEGEVLQLSVSKNMETTEDDYLSVIRAKTAALFSAAAEVG 313 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYG NLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 314 PIVANAGKAERNALKSYGTNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 373 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT++E+ FW+ I G S ENL+KA ++ + AL DT RA YG A+D+L Sbjct: 374 AYRRGTEKERAFWREAIETGNNSDENLEKALGLITKYGALNDTIARAVHYGTIARDALAP 433 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP++ WK +LMEV+DFC++R+N Sbjct: 434 LPETPWKSALMEVIDFCIERVN 455 >gi|67866738|gb|AAY82368.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens] Length = 358 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 191/322 (59%), Positives = 248/322 (77%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL R SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 37 VKPLVDLTRADMEQVNQLILSRAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 96 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 97 GDHHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 156 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 157 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 216 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL Sbjct: 217 PIVAKTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 276 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT+ E+ FW++ I +G+ S ENL+KA ++ + L DT RA YG A+D+L Sbjct: 277 SYRRGTQDERAFWRNAIENGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAP 336 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+S WK +L+EV+DFC++RLN Sbjct: 337 LPESPWKNALLEVIDFCIERLN 358 >gi|112950409|gb|ABI26723.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens] Length = 358 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 191/322 (59%), Positives = 246/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 37 VKPLVDLTRPDMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 96 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 97 GDNHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 156 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 157 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 216 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL Sbjct: 217 PIVAKTDKATRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 276 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT+ E+ FW++ I G+ S ENL+KA ++ + L DT RA YG A+D+L Sbjct: 277 SYRRGTQDERAFWRTAIEKGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAP 336 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S WK +L+EV+DFC++RLN Sbjct: 337 LPQSPWKDALLEVIDFCIERLN 358 >gi|37903500|gb|AAP56240.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens] Length = 358 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 191/322 (59%), Positives = 246/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 37 VKPLVDLTRPDMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 96 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 97 GDNHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 156 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 157 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 216 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL Sbjct: 217 PIVAKTDKATRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 276 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT+ E+ FW++ I G+ S ENL+KA ++ + L DT RA YG A+D+L Sbjct: 277 SYRRGTQDERAFWRTAIEKGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAP 336 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S WK +L+EV+DFC++RLN Sbjct: 337 LPQSPWKDALLEVIDFCIERLN 358 >gi|159184398|ref|NP_353656.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str. C58] gi|159139711|gb|AAK86441.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str. C58] Length = 338 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 192/322 (59%), Positives = 246/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL R SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 17 VKPLVDLTRPDMERVNQLILSRAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 77 GDNHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL Sbjct: 197 PIVAKTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT+ E+ FW++ I G+ S ENL+KA ++ + L DT RA YG A+D+L Sbjct: 257 SYRRGTQDERAFWRNAIEKGESSDENLEKALGLITKYNGLGDTIGRATHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S WK +L+EV+DFC++RLN Sbjct: 317 LPQSPWKNALLEVIDFCIERLN 338 >gi|291086510|ref|ZP_06571551.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220] gi|291067630|gb|EFE05739.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220] Length = 498 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 178 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 237 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 238 ENAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 297 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 298 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 357 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 358 GILAGCSAEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 417 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I G L+ M +L T RA KA +L+ Sbjct: 418 AMRHGTPEQAQMIRQAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 476 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 477 LPDTPWREALIGLAHIAVQR 496 >gi|325292016|ref|YP_004277880.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3] gi|325059869|gb|ADY63560.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3] Length = 338 Score = 338 bits (868), Expect = 5e-91, Method: Composition-based stats. Identities = 191/322 (59%), Positives = 248/322 (77%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL R SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 17 VKPLVDLTRADMERVNQLILSRAGSDVQMIPEVANHLISSGGKRLRPMLTLASASMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 77 GDHHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYGMNLG+AFQLVDDVLDY G+ ++GKN G+DFR GK TLPVIL Sbjct: 197 PIVAKTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGKNTGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT+ E+ FW++ I +G+ S ENL+KA ++ + L DT RA YG A+D+L Sbjct: 257 SYRRGTQDERAFWRNAIENGESSDENLEKALGLIAKYNGLGDTIGRATHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+S WK +L+EV+DFC++RLN Sbjct: 317 LPESPWKNALLEVIDFCIERLN 338 >gi|15964599|ref|NP_384952.1| putative octaprenyl-diphosphate synthase protein [Sinorhizobium meliloti 1021] gi|307309345|ref|ZP_07589008.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C] gi|307320081|ref|ZP_07599502.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83] gi|15073777|emb|CAC45418.1| Putative octaprenyl-diphosphate synthase [Sinorhizobium meliloti 1021] gi|306894296|gb|EFN25061.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83] gi|306900214|gb|EFN30832.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C] Length = 338 Score = 338 bits (868), Expect = 5e-91, Method: Composition-based stats. Identities = 187/322 (58%), Positives = 241/322 (74%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLTL DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 VKPLVDLTLSDMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 77 GDGHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSIDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAASEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + R ALKSYG NLG+AFQLVDDVLDY G +++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVAGGSKADRNALKSYGTNLGLAFQLVDDVLDYGGTSSDLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT +++ FW+ I G NL+KA ++R L DT RA YG A+D+L Sbjct: 257 SYRRGTPQDRAFWREAIEGGASDAANLEKALGLIRRYGGLTDTIARAKHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S WK +L+EV+DFC+ R++ Sbjct: 317 LPASPWKSALVEVIDFCIDRVS 338 >gi|161506132|ref|YP_001573244.1| hypothetical protein SARI_04320 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867479|gb|ABX24102.1| hypothetical protein SARI_04320 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 498 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 178 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 237 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 238 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 297 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 298 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 357 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 358 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGKHLGKNVGDDLNEGKPTLPLLH 417 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L M +L T RA KA +L+ Sbjct: 418 AMRHGTPEQSTMIRTAIEQGN-GRHLLDPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 476 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 477 LPDTPWREALIGLAHIAVQR 496 >gi|157148758|ref|YP_001456077.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895] gi|157085963|gb|ABV15641.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895] Length = 498 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 178 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 237 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 238 ENAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 297 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 298 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 357 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 358 GLLAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 417 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 418 AMRNGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMTACGSLEWTRQRAEDEADKAIAALQI 476 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 477 LPDTPWREALIGLAHIAVQR 496 >gi|306842306|ref|ZP_07474966.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO2] gi|306287563|gb|EFM59019.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO2] Length = 322 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 185/322 (57%), Positives = 236/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 1 MQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 61 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 121 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 181 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYSGSAADLGKNTGDDFREGKITLPVIL 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 241 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 300 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 S K +L+EVVDFC+ R+N Sbjct: 301 FKASPQKDALIEVVDFCISRVN 322 >gi|150395683|ref|YP_001326150.1| polyprenyl synthetase [Sinorhizobium medicae WSM419] gi|150027198|gb|ABR59315.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419] Length = 338 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 184/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 VKPLVDLTQSDMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 77 GDGHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAASEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYG NLG+AFQLVDDVLDY G +++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVASASKADRNALKSYGTNLGLAFQLVDDVLDYGGSSSDLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT +++ FW+ I G NL+KA ++ L DT RA YG A+D+L Sbjct: 257 SYRRGTPQDRAFWREAIEGGASDEANLEKALSLIHRYGGLTDTIARAKHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S K +L+EV+DFC+ R++ Sbjct: 317 LPVSPCKSALVEVIDFCIDRVS 338 >gi|153007864|ref|YP_001369079.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] gi|151559752|gb|ABS13250.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] Length = 356 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 184/322 (57%), Positives = 238/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN +IL R SDVEMIP+V +LI SGGKRLRPM+TLA A M Y Sbjct: 35 VQPLVDLTKADMARVNEMILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLAAARMFGYE 94 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 95 GDGHVRLATAVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFKM 154 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 155 MVDVGSLDALDVLATSASVIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAGEVG 214 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 215 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 274 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I DG +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 275 SYRRGTDDERAFWKHAIEDGASDDASLEKAIGLMTKHGAIADTVQRARHFGEIARDALAP 334 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L + K +L+EV+DFC+ R+N Sbjct: 335 LKATPQKDALIEVIDFCISRVN 356 >gi|239831276|ref|ZP_04679605.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] gi|239823543|gb|EEQ95111.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] Length = 356 Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 181/322 (56%), Positives = 238/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN +IL R SDVEMIP+V +LI SGGKRLRPM+TLA A M Y Sbjct: 35 VQPLVDLTKADMARVNEMILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLAAARMFGYE 94 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 95 GDGHVRLATAVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFKM 154 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 155 MVDVGSLDALDVLATSASVIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAGEVG 214 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + + R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 215 PIIAGARPADRVALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 274 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I +G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 275 SYRRGTDDERAFWKHAIEEGASDDASLQKAIGLMTKHGAIADTVQRARHFGEIARDALAP 334 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L + K +L+EV+DFC+ R+N Sbjct: 335 LKATPQKDALIEVIDFCISRVN 356 >gi|62289388|ref|YP_221181.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str. 9-941] gi|189023639|ref|YP_001934407.1| polyprenyl synthetase [Brucella abortus S19] gi|254693184|ref|ZP_05155012.1| hypothetical protein Babob3T_00652 [Brucella abortus bv. 3 str. Tulya] gi|254696828|ref|ZP_05158656.1| hypothetical protein Babob28_03708 [Brucella abortus bv. 2 str. 86/8/59] gi|254707866|ref|ZP_05169694.1| hypothetical protein BpinM_13091 [Brucella pinnipedialis M163/99/10] gi|254709549|ref|ZP_05171360.1| hypothetical protein BpinB_04602 [Brucella pinnipedialis B2/94] gi|254713033|ref|ZP_05174844.1| hypothetical protein BcetM6_06634 [Brucella ceti M644/93/1] gi|254716613|ref|ZP_05178424.1| hypothetical protein BcetM_09363 [Brucella ceti M13/05/1] gi|256031043|ref|ZP_05444657.1| hypothetical protein BpinM2_10374 [Brucella pinnipedialis M292/94/1] gi|256060537|ref|ZP_05450705.1| hypothetical protein Bneo5_09318 [Brucella neotomae 5K33] gi|256254446|ref|ZP_05459982.1| hypothetical protein BcetB_09183 [Brucella ceti B1/94] gi|256256948|ref|ZP_05462484.1| hypothetical protein Babob9C_06236 [Brucella abortus bv. 9 str. C68] gi|260168175|ref|ZP_05754986.1| polyprenyl synthetase family protein [Brucella sp. F5/99] gi|306839902|ref|ZP_07472700.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. NF 2653] gi|306845036|ref|ZP_07477617.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO1] gi|62195520|gb|AAX73820.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str. 9-941] gi|189019211|gb|ACD71933.1| Polyprenyl synthetase [Brucella abortus S19] gi|306274668|gb|EFM56457.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO1] gi|306405088|gb|EFM61369.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. NF 2653] gi|326408435|gb|ADZ65500.1| Polyprenyl synthetase [Brucella melitensis M28] gi|326538151|gb|ADZ86366.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 338 Score = 334 bits (857), Expect = 9e-90, Method: Composition-based stats. Identities = 185/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 17 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 77 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 137 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 197 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 257 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S K +L+EVVDFC+ R+N Sbjct: 317 LKASPQKDALIEVVDFCISRVN 338 >gi|237730107|ref|ZP_04560588.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2] gi|226908713|gb|EEH94631.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2] Length = 370 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 50 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 109 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 110 ENAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 169 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 170 MTSLGSLKVLEVMSKAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 229 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 230 GILAGCSEEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 289 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I G L+ M +L T RA KA +L+ Sbjct: 290 AMRHGTPEQALMIRQAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 348 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 349 LPDTPWREALIGLAHIAVQR 368 >gi|62181813|ref|YP_218230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62129446|gb|AAX67149.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|267995503|gb|ACY90388.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|322716302|gb|EFZ07873.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 381 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 61 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 120 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 121 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 180 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 181 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 240 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 241 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 300 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 301 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 359 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 360 LPDTPWREALIGLAHIAVQR 379 >gi|82699315|ref|YP_413889.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225851937|ref|YP_002732170.1| hypothetical protein BMEA_A0432 [Brucella melitensis ATCC 23457] gi|254688701|ref|ZP_05151955.1| hypothetical protein Babob68_00654 [Brucella abortus bv. 6 str. 870] gi|254718581|ref|ZP_05180392.1| hypothetical protein Bru83_03399 [Brucella sp. 83/13] gi|254729734|ref|ZP_05188312.1| hypothetical protein Babob42_00662 [Brucella abortus bv. 4 str. 292] gi|256044121|ref|ZP_05447028.1| hypothetical protein Bmelb1R_06464 [Brucella melitensis bv. 1 str. Rev.1] gi|256112919|ref|ZP_05453832.1| hypothetical protein Bmelb3E_09565 [Brucella melitensis bv. 3 str. Ether] gi|256159107|ref|ZP_05456928.1| hypothetical protein BcetM4_09356 [Brucella ceti M490/95/1] gi|256368857|ref|YP_003106363.1| polyprenyl synthetase family protein [Brucella microti CCM 4915] gi|260545860|ref|ZP_05821601.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260563478|ref|ZP_05833964.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260754179|ref|ZP_05866527.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260757399|ref|ZP_05869747.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260761223|ref|ZP_05873566.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260883204|ref|ZP_05894818.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|261213426|ref|ZP_05927707.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|261218414|ref|ZP_05932695.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261221617|ref|ZP_05935898.1| polyprenyl synthetase [Brucella ceti B1/94] gi|261315356|ref|ZP_05954553.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261317077|ref|ZP_05956274.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261320737|ref|ZP_05959934.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261324532|ref|ZP_05963729.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261757634|ref|ZP_06001343.1| polyprenyl synthetase [Brucella sp. F5/99] gi|265983557|ref|ZP_06096292.1| polyprenyl synthetase [Brucella sp. 83/13] gi|265988115|ref|ZP_06100672.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|265990531|ref|ZP_06103088.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265994359|ref|ZP_06106916.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|265997580|ref|ZP_06110137.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|265999601|ref|ZP_05467084.2| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|297247801|ref|ZP_06931519.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196] gi|82615416|emb|CAJ10385.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225640302|gb|ACO00216.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|255999015|gb|ACU47414.1| polyprenyl synthetase family protein [Brucella microti CCM 4915] gi|260097267|gb|EEW81142.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260153494|gb|EEW88586.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260667717|gb|EEX54657.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260671655|gb|EEX58476.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260674287|gb|EEX61108.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260872732|gb|EEX79801.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|260915033|gb|EEX81894.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|260920201|gb|EEX86854.1| polyprenyl synthetase [Brucella ceti B1/94] gi|260923503|gb|EEX90071.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261293427|gb|EEX96923.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261296300|gb|EEX99796.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261300512|gb|EEY04009.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261304382|gb|EEY07879.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261737618|gb|EEY25614.1| polyprenyl synthetase [Brucella sp. F5/99] gi|262552048|gb|EEZ08038.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|262765472|gb|EEZ11261.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|263001315|gb|EEZ13890.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263094886|gb|EEZ18624.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|264660312|gb|EEZ30573.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|264662149|gb|EEZ32410.1| polyprenyl synthetase [Brucella sp. 83/13] gi|297174970|gb|EFH34317.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196] Length = 340 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 185/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 19 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 78 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 79 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 138 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 139 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 198 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 199 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 258 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 259 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 318 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S K +L+EVVDFC+ R+N Sbjct: 319 LKASPQKDALIEVVDFCISRVN 340 >gi|161616314|ref|YP_001590279.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194443184|ref|YP_002042563.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449256|ref|YP_002047334.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472845|ref|ZP_03078829.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736065|ref|YP_002116255.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195873559|ref|ZP_02697387.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197250149|ref|YP_002148230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264749|ref|ZP_03164823.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197301014|ref|ZP_02663064.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|198241919|ref|YP_002217276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386848|ref|ZP_03213460.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204931208|ref|ZP_03222002.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205357197|ref|ZP_02345799.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205358083|ref|ZP_02575589.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205358511|ref|ZP_02656973.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205359199|ref|ZP_02668072.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205359738|ref|ZP_02831626.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205360595|ref|ZP_02684656.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224585102|ref|YP_002638901.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|161365678|gb|ABX69446.1| hypothetical protein SPAB_04122 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401847|gb|ACF62069.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407560|gb|ACF67779.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459209|gb|EDX48048.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711567|gb|ACF90788.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633125|gb|EDX51539.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197213852|gb|ACH51249.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243004|gb|EDY25624.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289078|gb|EDY28447.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936435|gb|ACH73768.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603946|gb|EDZ02491.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204319975|gb|EDZ05181.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323255|gb|EDZ11094.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327615|gb|EDZ14379.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333924|gb|EDZ20688.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337771|gb|EDZ24535.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343490|gb|EDZ30254.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348475|gb|EDZ35106.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224469630|gb|ACN47460.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|312914332|dbj|BAJ38306.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087750|emb|CBY97514.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225271|gb|EFX50330.1| Octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615309|gb|EFY12230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618332|gb|EFY15223.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622863|gb|EFY19707.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626815|gb|EFY23612.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631384|gb|EFY28144.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635349|gb|EFY32063.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643348|gb|EFY39912.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647080|gb|EFY43581.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648883|gb|EFY45328.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655075|gb|EFY51386.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657678|gb|EFY53946.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664174|gb|EFY60372.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667457|gb|EFY63619.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674705|gb|EFY70797.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675662|gb|EFY71735.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682298|gb|EFY78321.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|323131665|gb|ADX19095.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195894|gb|EFZ81065.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199011|gb|EFZ84108.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204289|gb|EFZ89298.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207636|gb|EFZ92583.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323214747|gb|EFZ99496.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221227|gb|EGA05653.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323233295|gb|EGA17389.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239332|gb|EGA23382.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242417|gb|EGA26443.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323255257|gb|EGA39034.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262720|gb|EGA46276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264030|gb|EGA47538.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269416|gb|EGA52871.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625055|gb|EGE31400.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629328|gb|EGE35671.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 370 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 50 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 109 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 110 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 169 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 170 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 229 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 230 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 289 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 290 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 348 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 349 LPDTPWREALIGLAHIAVQR 368 >gi|225626910|ref|ZP_03784949.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella ceti str. Cudo] gi|225618567|gb|EEH15610.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella ceti str. Cudo] Length = 363 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 185/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 42 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 101 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 102 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 161 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 162 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 221 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 222 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 281 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 282 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 341 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S K +L+EVVDFC+ R+N Sbjct: 342 LKASPQKDALIEVVDFCISRVN 363 >gi|254701208|ref|ZP_05163036.1| hypothetical protein Bsuib55_10162 [Brucella suis bv. 5 str. 513] Length = 338 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 186/322 (57%), Positives = 238/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 17 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 77 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 137 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 197 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++RA+ DT RA +G+ A+D+L Sbjct: 257 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHRAIADTVQRARHFGEIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S K +L+EVVDFC+ R+N Sbjct: 317 LKASPQKDALIEVVDFCISRVN 338 >gi|17987815|ref|NP_540449.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] gi|17983542|gb|AAL52713.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] Length = 362 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 185/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 41 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 100 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 101 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 160 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 161 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 220 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 221 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 280 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 281 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 340 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S K +L+EVVDFC+ R+N Sbjct: 341 LKASPQKDALIEVVDFCISRVN 362 >gi|23501305|ref|NP_697432.1| polyprenyl synthetase family protein [Brucella suis 1330] gi|161618375|ref|YP_001592262.1| hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365] gi|254703754|ref|ZP_05165582.1| hypothetical protein Bsuib36_07492 [Brucella suis bv. 3 str. 686] gi|260566991|ref|ZP_05837461.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261754401|ref|ZP_05998110.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] gi|23347194|gb|AAN29347.1| polyprenyl synthetase family protein [Brucella suis 1330] gi|161335186|gb|ABX61491.1| Hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365] gi|260156509|gb|EEW91589.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261744154|gb|EEY32080.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] Length = 340 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 185/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 19 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 78 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 79 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 138 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 139 MVDVGSFDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 198 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 199 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 258 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 259 SYRRGTDEERAFWKGAIEGGASYDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 318 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S K +L+EVVDFC+ R+N Sbjct: 319 LKASPQKDALIEVVDFCISRVN 340 >gi|260460355|ref|ZP_05808607.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] gi|259034000|gb|EEW35259.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] Length = 338 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 182/322 (56%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DM +VN LIL + SDVEMIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 IKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTLAAAQMFGYS 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV LA A+EF+HTATLLHDDVVD+S +RRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GEGHVKLATAVEFMHTATLLHDDVVDESGMRRGKKTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL+ LS A +AEGE+ QL+ +KNL+ TE+++ VIK+KTA LFSAA EV Sbjct: 137 MVDVGSLEALDILSSAASIIAEGEVMQLAAAKNLETTEDEHFAVIKAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA + R AL+SYGMNLG+AFQL+DD LDY G ++GKN+G+DFR GK TLPVIL Sbjct: 197 PVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGKNVGDDFREGKVTLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RG+K E+ FWK I D + L+KA +M + A+ DT RA +G+ A+D+L Sbjct: 257 AYRRGSKAERTFWKRAIEDNVVDDAGLEKAIGLMTRHGAIADTIGRARHFGEIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L ++ K +L++V+DFC+ R+N Sbjct: 317 LEETPQKSALIDVIDFCISRVN 338 >gi|237814874|ref|ZP_04593872.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella abortus str. 2308 A] gi|237789711|gb|EEP63921.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella abortus str. 2308 A] Length = 363 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 185/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 42 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 101 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 102 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 161 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 162 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 221 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 222 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 281 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 282 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 341 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S K +L+EVVDFC+ R+N Sbjct: 342 LKASPQKDALIEVVDFCISRVN 363 >gi|163761016|ref|ZP_02168094.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica DFL-43] gi|162281797|gb|EDQ32090.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica DFL-43] Length = 338 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 185/322 (57%), Positives = 238/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L D T DME+VN LIL + SDV MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 17 VKPLVDKTRGDMERVNQLILSKAGSDVAMIPEVANHLISSGGKRLRPMLTLASATMFGYS 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA ++EF+HTATLLHDDVVD+S LRRG+ AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GDFHIKLATSVEFMHTATLLHDDVVDESDLRRGRSTARMIWGNQASVLVGDFLLGQAFKM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S EAL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LFSAA EV Sbjct: 137 MVEVGSLEALDVLSTAAAVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFSAACEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA + R AL+SYG+NLG+AFQL+DDVLDY G N++GKN+G+DFR GK TLPV+L Sbjct: 197 PIIAETSKAERSALRSYGINLGLAFQLIDDVLDYGGSANDLGKNVGDDFREGKITLPVVL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RG++ E+ FW+ I GK L+KA ++ + +L DT RA Y A+D+L Sbjct: 257 AYRRGSEAERAFWREAIEGGKNDDAALEKALGLITKYGSLKDTMARAEHYASIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K +L+EV+ FCL R N Sbjct: 317 LPDSDEKAALLEVIAFCLNRAN 338 >gi|82395324|gb|ABB72030.1| decaprenyl diphosphate synthase [Sinorhizobium meliloti] Length = 338 Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats. Identities = 184/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLTL DME+VN IL + SDV+MIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 VKPLVDLTLSDMERVNQPILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR WGNQ SVLVGDFLL QAF M Sbjct: 77 GDGHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTFWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL V ++KTA LF+AA EV Sbjct: 137 MVDVGSIDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLRVNRAKTAALFAAASEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + R ALKSYG NLG+AFQLVDDVLDY G +++GKN+G+DFR K TLPVIL Sbjct: 197 PIVAGGSKADRNALKSYGTNLGLAFQLVDDVLDYGGTSSDLGKNVGDDFRESKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT +++ FW+ I G NL+KA ++R L DT RA YG A+D+L Sbjct: 257 SYRRGTPQDRAFWREAIEGGASDAANLEKALGLIRRYGGLTDTIARAKHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S WK +L+EV+DFC+ R++ Sbjct: 317 LPASPWKSALVEVIDFCIDRVS 338 >gi|227821037|ref|YP_002825007.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234] gi|227340036|gb|ACP24254.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234] Length = 338 Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats. Identities = 186/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L LT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 VKPLVGLTAADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 77 GDAHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS A +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYLQVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + R ALKSYGMNLG+AFQLVDDVLDY G +++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVASASRADRNALKSYGMNLGLAFQLVDDVLDYGGSSSDLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT ++ FW+ I G NL KA ++R L DT RA YG A+D+L Sbjct: 257 SYRRGTPEDRAFWREAIEGGVTDAANLDKALGLIRRYGGLTDTIARAQHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S WK +L+EV+DFC+ R++ Sbjct: 317 LPASPWKSALVEVIDFCIDRVS 338 >gi|261751747|ref|ZP_05995456.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] gi|261741500|gb|EEY29426.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] Length = 340 Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats. Identities = 186/322 (57%), Positives = 238/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 19 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 78 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 79 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 138 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 139 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 198 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 199 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 258 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++RA+ DT RA +G+ A+D+L Sbjct: 259 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHRAIADTVQRARHFGEIARDALAP 318 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S K +L+EVVDFC+ R+N Sbjct: 319 LKASPQKDALIEVVDFCISRVN 340 >gi|294851781|ref|ZP_06792454.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026] gi|294820370|gb|EFG37369.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026] Length = 340 Score = 331 bits (850), Expect = 7e-89, Method: Composition-based stats. Identities = 186/322 (57%), Positives = 238/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 19 VQPLVDLTRADMARVNELILSRAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 78 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 79 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 138 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 139 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 198 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 199 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 258 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 259 SYRRGTDEERAFWKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 318 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L SS K +L+EVVDFC+ R+N Sbjct: 319 LKASSQKDALIEVVDFCISRVN 340 >gi|163842683|ref|YP_001627087.1| hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445] gi|163673406|gb|ABY37517.1| Hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445] Length = 340 Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats. Identities = 185/322 (57%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL R SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 19 VQPLVDLTRADMARVNELILSRAASDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 78 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 79 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 138 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 139 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 198 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 199 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGKNTGDDFREGKITLPVIL 258 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FWK I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 259 SYRRGTDEERAFWKGAIEGGASYDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 318 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S K +L+EVVDFC+ R+N Sbjct: 319 LKASPQKDALIEVVDFCISRVN 340 >gi|148559082|ref|YP_001258425.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840] gi|148370339|gb|ABQ60318.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840] Length = 328 Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats. Identities = 183/322 (56%), Positives = 235/322 (72%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT DM +VN LIL SDVEMIP+V +LI SGGKRLRPM+TLA+A M Y Sbjct: 7 VQPLVDLTRADMARVNELILSCAGSDVEMIPEVANHLISSGGKRLRPMMTLASARMFGYE 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF M Sbjct: 67 GDGHVRLATSVEFMHTATLLHDDVVDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFKM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ L+ A +AEGE+ QL+ +KN++ TE++YL VIK+KTA LFSAA EV Sbjct: 127 MVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTEDEYLAVIKAKTAALFSAAAEVG 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG Q S R AL+ YG+NLG+AFQLVDD LDY G ++GKN G+DFR GK TLPVIL Sbjct: 187 PIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSATDLGKNTGDDFREGKITLPVIL 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ F K I G +L+KA +M ++ A+ DT RA +G+ A+D+L Sbjct: 247 SYRRGTDEERAFCKGAIEGGASDDASLQKAIGLMMKHGAIADTVQRARHFGEIARDALAP 306 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S K +L+EVVDFC+ R+N Sbjct: 307 LKASPQKDALIEVVDFCISRVN 328 >gi|312883913|ref|ZP_07743630.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368371|gb|EFP95906.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC BAA-2122] Length = 323 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 132/318 (41%), Positives = 197/318 (61%), Gaps = 1/318 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 ++ LT DM KVN I ++ SDV +I + Y++ GGKR+RP+L + +A L Y+G Sbjct: 5 TIQALTADDMAKVNETIHAQLNSDVTLINQLGFYIVSGGGKRVRPLLAIISAKALGYKGQ 64 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 H L A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 65 GHTLSAAFIEFIHTATLLHDDVVDESDMRRGKATANSAFGNAASVLVGDYIYTRSFQMMT 124 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E S + L+ +S +AEGE++QL + +V+EE Y+ VI SKTA LF A +V ++ Sbjct: 125 ELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPNVSEESYMQVIYSKTARLFEVATQVGAV 184 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 ++ + + ALK+YG LG AFQL+DDV+DY EMGKN+G+D GKPTLP+I A Sbjct: 185 LSEAPSEIEIALKNYGRYLGTAFQLIDDVMDYTSTGKEMGKNVGDDLAEGKPTLPLIHAM 244 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 Q + + K I + +++L++ IM++ +L +AY KA L C+P Sbjct: 245 QTSSPEQSQLIKQAIENAN-GMDHLQEILDIMKQTGSLDYARQKAYQEADKAISELNCIP 303 Query: 303 DSSWKKSLMEVVDFCLQR 320 +S +K++L+ + + R Sbjct: 304 ESDYKQALITLAHMSVNR 321 >gi|13476175|ref|NP_107745.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099] gi|14026935|dbj|BAB53531.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099] Length = 338 Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats. Identities = 182/322 (56%), Positives = 237/322 (73%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DM +VN LIL + SDVEMIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 IKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTLAAAQMFGYA 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV LA ++EF+HTATLLHDDVVD+S +RRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GEGHVKLATSVEFMHTATLLHDDVVDESGMRRGKKTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL+ LS A +AEGE+ QL+ +KNL+ TE+++ VIK+KTA LFSAA EV Sbjct: 137 MVDVGSLEALDILSSAASIIAEGEVMQLAAAKNLETTEDEHFAVIKAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA + R AL+SYGMNLG+AFQL+DD LDY G ++GKN+G+DFR GK TLPVIL Sbjct: 197 PVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGKNVGDDFREGKVTLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGTK E+ FWK I D + L+KA +M + A+ DT RA +G+ A+D+L Sbjct: 257 AYRRGTKAERTFWKRAIEDNVVDDAGLEKAIGLMTRHGAIADTIGRARHFGEIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L ++ K +L++V+DFC+ R+N Sbjct: 317 LEETRQKSALIDVIDFCISRVN 338 >gi|190890586|ref|YP_001977128.1| octaprenyl-diphosphate synthase [Rhizobium etli CIAT 652] gi|190695865|gb|ACE89950.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CIAT 652] Length = 346 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 192/322 (59%), Positives = 247/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A + +YR Sbjct: 25 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASLFDYR 84 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+NHV LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 85 GENHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 144 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 145 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLAVIRAKTAALFAAAAEVG 204 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 205 PIVAEAGKSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 264 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT+ E+ FW+ I G S NL+KA ++ + L DT RA YG A+D+L Sbjct: 265 AYRRGTEDERAFWRDAIEAGNSSDANLEKALGLITKYGTLADTIGRAVHYGTIARDALAP 324 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ WK +LMEV+DFC++R+N Sbjct: 325 LPDTVWKSALMEVIDFCIERVN 346 >gi|86356521|ref|YP_468413.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42] gi|86280623|gb|ABC89686.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42] Length = 346 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 192/322 (59%), Positives = 247/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A + +YR Sbjct: 25 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASLFDYR 84 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 85 GDNHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 144 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 145 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 204 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 205 PIVAEAGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 264 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT+ E+ FW+ I G S NL+KA ++ + L DT RA YG A+D+L Sbjct: 265 AYRRGTEDERAFWRDAIEAGNSSDANLEKALGLITKYGTLADTIGRAIHYGTIARDALAP 324 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ WK +LMEV+DFC++R+N Sbjct: 325 LPDTVWKSALMEVIDFCIERVN 346 >gi|296447427|ref|ZP_06889352.1| Geranyltranstransferase [Methylosinus trichosporium OB3b] gi|296255047|gb|EFH02149.1| Geranyltranstransferase [Methylosinus trichosporium OB3b] Length = 338 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 171/320 (53%), Positives = 231/320 (72%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L D+++VN LIL+R SDV IP+V +LI +GGKRLRPML LATA M YR Sbjct: 17 LDSLLALIGPDLQRVNQLILQRTGSDVTTIPEVANHLISAGGKRLRPMLVLATAGMCGYR 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEF+HTATLLHDDVVD+S +RRGK+AAR++WGN+T VLVGDFLL AF M Sbjct: 77 GDGHIKFAAGIEFMHTATLLHDDVVDESDMRRGKIAARMLWGNETCVLVGDFLLGHAFKM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E L +S A +AEGE+ QL+ +K+ TE+ Y+ VI+SKTA LF+AA EV Sbjct: 137 MVEPGVLPCLSVVSQAAAVIAEGEILQLNSAKDTQTTEDAYMAVIRSKTAELFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++G + A +SYGMNLGIAFQL+DD LDY G+ ++GKN+G+DFR GK TLPV+L Sbjct: 197 PMLSGRPKADEAACRSYGMNLGIAFQLIDDALDYGGQSAKLGKNVGDDFREGKITLPVVL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG++ E+ FW+ T+ G+I+ +++ A +M+++ AL DT RA YG A+D+L Sbjct: 257 AFRRGSENEREFWRRTLEKGEIADGDVETACALMKKHDALKDTVERASHYGAIARDALEI 316 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S WK +L+EVVDFC+QR Sbjct: 317 FPASPWKSALLEVVDFCVQR 336 >gi|319784751|ref|YP_004144227.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170639|gb|ADV14177.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 338 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 182/322 (56%), Positives = 235/322 (72%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DM +VN LIL + SDVEMIP+V +LI SGGKRLRPMLTLA A M Y Sbjct: 17 IKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTLAAAQMFGYA 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV LA ++EF+HTATLLHDDVVD+S +RRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GEGHVKLATSVEFMHTATLLHDDVVDESGMRRGKKTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL+ LS A +AEGE+ QL+ +KNL+ TE+++ VIK+KTA LFSAA EV Sbjct: 137 MVDVGSLEALDILSSAASIIAEGEVMQLAAAKNLETTEDEHFAVIKAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA + R AL+SYGMNLG+AFQL+DD LDY G ++GKN+G+DFR GK TLPVIL Sbjct: 197 PVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGKNVGDDFREGKVTLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGTK E+ FWK I D L+KA +M + A+ DT RA +G+ A+D+L Sbjct: 257 AYRRGTKAERTFWKRAIEDNVADDAGLEKATGLMTRHGAIADTIGRARHFGEIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L + K +L++V+DFC+ R+N Sbjct: 317 LEATPQKSALIDVIDFCISRVN 338 >gi|316932581|ref|YP_004107563.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1] gi|315600295|gb|ADU42830.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1] Length = 336 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 176/322 (54%), Positives = 229/322 (71%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y Sbjct: 15 IDQLVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYT 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M Sbjct: 75 GDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRM 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV Sbjct: 135 MVEVGSLRALDILSSASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 IA + A +S+GMN+GIAFQL+DDVLDY G+ ++GKN+G+DFR GK TLPV+L Sbjct: 195 PAIANRPKPEQSACRSFGMNIGIAFQLIDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW ++ G+IS +L +A +M ++RAL DT RA+ YG A D+L Sbjct: 255 AFRRGNDAEREFWIKSLERGEISDADLDQAIKLMTKHRALEDTIQRAHHYGAMAVDALAL 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P S K +L +VV FCL R + Sbjct: 315 FPSSPMKTALEQVVAFCLARSH 336 >gi|327192818|gb|EGE59745.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CNPAF512] Length = 338 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 192/322 (59%), Positives = 247/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A + +YR Sbjct: 17 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASLFDYR 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+NHV LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GENHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVAEAGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT+ E+ FW+ I G S NL+KA ++ + L DT RA YG A+D+L Sbjct: 257 AYRRGTEDERAFWRDAIEAGNSSDANLEKALGLITKYGTLADTIGRAVHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ WK +LMEV+DFC++R+N Sbjct: 317 LPDTVWKSALMEVIDFCIERVN 338 >gi|283788174|ref|YP_003368039.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168] gi|282951628|emb|CBG91328.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168] Length = 323 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 200/320 (62%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG ++ + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCSDAQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMRHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQT 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|110633068|ref|YP_673276.1| polyprenyl synthetase [Mesorhizobium sp. BNC1] gi|110284052|gb|ABG62111.1| Polyprenyl synthetase [Chelativorans sp. BNC1] Length = 338 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 172/322 (53%), Positives = 234/322 (72%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L LT DM +VN LIL + SDVE+IP + ++LI SGGKRLRPM+TLA A M Y Sbjct: 17 IERLIGLTKDDMARVNDLILSKAGSDVELIPQLARHLISSGGKRLRPMITLAAAQMFGYS 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV LA ++EF+HTATLLHDDVVD+S +RRGK AR +WGNQ SVLVGD+LL QAF M Sbjct: 77 GEGHVKLATSVEFMHTATLLHDDVVDESDMRRGKKTARTIWGNQASVLVGDYLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL+ LS A +AEGE+ QL +SKNL+ TE++YL VIK+KTA LFSAA EV Sbjct: 137 MVDVGSLEALDVLSSAASIIAEGEVMQLGVSKNLETTEDEYLSVIKAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA + R AL+S+G+NLG+AFQLVDD LDY G ++GKN+G+DFR GK TLPVIL Sbjct: 197 PIIAEASRNDRAALRSFGINLGLAFQLVDDALDYGGSSRDLGKNVGDDFREGKVTLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RG++ E+ FWK I + + + L KA +M + ++ DT RA +G+ A+D+L Sbjct: 257 SYRRGSEEERLFWKRAIEENQNDDDALAKAIGLMNRHGSIGDTIARARHFGEIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L + K +L +V+DFC+ R++ Sbjct: 317 LKSTPQKAALFDVIDFCISRVS 338 >gi|241203314|ref|YP_002974410.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857204|gb|ACS54871.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 338 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 191/322 (59%), Positives = 248/322 (77%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A + +YR Sbjct: 17 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASASLFDYR 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+NHV LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GENHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVAEAGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT+ E+ FW+ I G + NL+KA ++ + L DT RA YG A+D+L Sbjct: 257 AYRRGTEDERAFWRDAIEAGNSTDANLEKALGLITKYGTLSDTIGRAIHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ WK +LMEV+DFC++R+N Sbjct: 317 LPDTVWKSALMEVIDFCIERVN 338 >gi|331684834|ref|ZP_08385426.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H299] gi|331078449|gb|EGI49655.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H299] Length = 323 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN TSVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNATSVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|254038351|ref|ZP_04872409.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia sp. 1_1_43] gi|226839975|gb|EEH71996.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia sp. 1_1_43] Length = 340 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 20 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 79 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 80 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 139 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 140 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 199 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 200 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 259 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 260 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 318 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 319 LPDTPWREALIGLAHIAVQR 338 >gi|209548129|ref|YP_002280046.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533885|gb|ACI53820.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 338 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 192/322 (59%), Positives = 247/322 (76%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA A + +YR Sbjct: 17 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAASLFDYR 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+NHV LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GENHVKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSSAACIIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVAEAGKSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT+ E+ FW+ I G + NL+KA ++ + L DT RA YG A+D+L Sbjct: 257 AYRRGTEDERAFWRDAIEAGNSTDANLEKALGLITKYGTLSDTIGRAVHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ WK SLMEV+DFC++R+N Sbjct: 317 LPDTVWKSSLMEVIDFCIERVN 338 >gi|39934115|ref|NP_946391.1| farnesyltranstransferase [Rhodopseudomonas palustris CGA009] gi|192289642|ref|YP_001990247.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] gi|39647963|emb|CAE26483.1| octaprenyl-diphosphate synthase [Rhodopseudomonas palustris CGA009] gi|192283391|gb|ACE99771.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] Length = 336 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 176/322 (54%), Positives = 229/322 (71%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y Sbjct: 15 IDQLVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYT 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M Sbjct: 75 GDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRM 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV Sbjct: 135 MVEVGSLRALDILSSASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 IA + A +S+GMN+GIAFQL+DDVLDY G+ ++GKN+G+DFR GK TLPV+L Sbjct: 195 PAIANRPKPEQSACRSFGMNIGIAFQLIDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW ++ G+IS +L +A +M ++RAL DT RA+ YG A D+L Sbjct: 255 AFRRGNDAEREFWIKSLERGEISDADLDQAIKLMTKHRALDDTIQRAHHYGAMAVDALAL 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P S K +L +VV FCL R + Sbjct: 315 FPSSPMKTALEQVVAFCLARSH 336 >gi|116250711|ref|YP_766549.1| octaprenyl-diphosphate synthase [Rhizobium leguminosarum bv. viciae 3841] gi|115255359|emb|CAK06434.1| putative octaprenyl-diphosphate synthase [Rhizobium leguminosarum bv. viciae 3841] Length = 338 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 191/322 (59%), Positives = 249/322 (77%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L DLT DME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A + +YR Sbjct: 17 IKPLVDLTRADMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASASLFDYR 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+NH+ LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GENHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL+ LS AC +AEGE+ QLS++KN++ TE+DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A V S R ALKSYGMNLG+AFQLVDD LDY G+ ++GKN+G+DFR GK TLPVIL Sbjct: 197 PIVAEVGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGKNVGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RGT+ E+ FW+ I G + NL+KA ++ + L DT RA YG A+D+L Sbjct: 257 AYRRGTEDERAFWRDAIEAGNSTDANLEKALGLITKYGTLSDTIGRAIHYGTIARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ WK +LMEV+DFC++R+N Sbjct: 317 LPDTVWKSALMEVIDFCIERVN 338 >gi|218550470|ref|YP_002384261.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469] gi|218358011|emb|CAQ90657.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469] gi|324115209|gb|EGC09173.1| polyprenyl synthetase [Escherichia fergusonii B253] gi|325498768|gb|EGC96627.1| octaprenyl diphosphate synthase [Escherichia fergusonii ECD227] Length = 323 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 198/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPNITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG Q L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEQGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMRHGTPEQAQMIRNAIEHGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIKALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|115526409|ref|YP_783320.1| farnesyltranstransferase [Rhodopseudomonas palustris BisA53] gi|115520356|gb|ABJ08340.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisA53] Length = 341 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 174/322 (54%), Positives = 229/322 (71%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +L DM++VN IL R S+V MIP+V +LI SGGKRLRPMLTLA A + Y Sbjct: 20 IDQLVELVAADMKRVNATILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYT 79 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M Sbjct: 80 GDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRM 139 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV Sbjct: 140 MVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 199 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 IA + A +S+GMN+GIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L Sbjct: 200 PAIAERPKPEQSACRSFGMNIGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 259 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW ++ G+I+ +L +A +M ++RAL DT RA+ YG A D+L Sbjct: 260 AFRRGNDSERAFWIKSLERGEITDTDLDQAIGLMTKHRALEDTIQRAHHYGAMAVDALAL 319 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P S K +L +VV FCL R + Sbjct: 320 FPQSPMKTALEQVVAFCLARSH 341 >gi|315181275|gb|ADT88189.1| octaprenyl-diphosphate synthase [Vibrio furnissii NCTC 11218] Length = 396 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 131/319 (41%), Positives = 191/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 77 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAVLSAKALGYQG 136 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 H L A IEF HTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 137 QGHTLAAAFIEFTHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQMM 196 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 197 VELGSMKILQLMSEAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 256 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A + AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 257 ILADASPEIETALQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 316 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G + + I + L + M+E +L T +A KA L L Sbjct: 317 MRHGNAEQAAMIREAIEQAN-GMARLDEILAAMKETGSLEYTVAKANEEADKAITELAIL 375 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 376 PESDYKQALIALAHMAVNR 394 >gi|237706062|ref|ZP_04536543.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia sp. 3_2_53FAA] gi|226899102|gb|EEH85361.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia sp. 3_2_53FAA] Length = 340 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 20 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 79 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 80 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 139 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 140 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 199 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 200 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 259 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 260 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 318 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 319 LPDTPWREALVGLAHIAVQR 338 >gi|262172465|ref|ZP_06040143.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] gi|261893541|gb|EEY39527.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] Length = 323 Score = 325 bits (833), Expect = 7e-87, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 189/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 244 MQHGNPEQALMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQHEADKAIAELDIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 303 PESEYKQALITLAHMAVNR 321 >gi|262164113|ref|ZP_06031852.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] gi|262027641|gb|EEY46307.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] Length = 323 Score = 325 bits (833), Expect = 7e-87, Method: Composition-based stats. Identities = 134/319 (42%), Positives = 189/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 NH A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 SNHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 244 MQHGNPEQVLMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQHEADKAIAELAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 303 PESEYKQALITLAHMAVNR 321 >gi|258623396|ref|ZP_05718400.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573] gi|258584362|gb|EEW09107.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573] Length = 348 Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 188/319 (58%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y G Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYHG 88 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 268 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 269 MQHGNPEQALMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQHEADKAIAELDIL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 328 PESEYKQALITLAHMAVNR 346 >gi|323966367|gb|EGB61801.1| polyprenyl synthetase [Escherichia coli M863] gi|327251278|gb|EGE62967.1| polyprenyl synthetase family protein [Escherichia coli STEC_7v] Length = 323 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCSPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|260775534|ref|ZP_05884431.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260608715|gb|EEX34880.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 323 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 135/319 (42%), Positives = 192/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKR+RP+L + +A L Y+G Sbjct: 4 KAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRIRPLLAVLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 QAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNIIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + V AL++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPSEVETALQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q GT + + I +E L M + +L T +AY KA L L Sbjct: 244 MQHGTPEQTQMIREAIEKAN-GMEKLDSIMEAMEQTGSLEYTRQKAYQEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 +S +K++L+ + + R Sbjct: 303 SESPYKEALVTLAHMSVHR 321 >gi|15803727|ref|NP_289761.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 EDL933] gi|15833320|ref|NP_312093.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. Sakai] gi|168751593|ref|ZP_02776615.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4113] gi|168754169|ref|ZP_02779176.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4401] gi|168765367|ref|ZP_02790374.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4501] gi|168769043|ref|ZP_02794050.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4486] gi|168778214|ref|ZP_02803221.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4196] gi|168781331|ref|ZP_02806338.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4076] gi|168786073|ref|ZP_02811080.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC869] gi|168800901|ref|ZP_02825908.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC508] gi|195940043|ref|ZP_03085425.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. EC4024] gi|208813351|ref|ZP_03254680.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4045] gi|208818474|ref|ZP_03258794.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4042] gi|209396313|ref|YP_002272657.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4115] gi|217327318|ref|ZP_03443401.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. TW14588] gi|254795136|ref|YP_003079973.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. TW14359] gi|261228198|ref|ZP_05942479.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. FRIK2000] gi|261255054|ref|ZP_05947587.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. FRIK966] gi|12517802|gb|AAG58321.1|AE005547_7 octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. EDL933] gi|13363539|dbj|BAB37489.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. Sakai] gi|187766779|gb|EDU30623.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4196] gi|188014375|gb|EDU52497.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4113] gi|189001013|gb|EDU69999.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4076] gi|189358538|gb|EDU76957.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4401] gi|189361792|gb|EDU80211.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4486] gi|189364885|gb|EDU83301.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4501] gi|189374093|gb|EDU92509.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC869] gi|189376838|gb|EDU95254.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC508] gi|208734628|gb|EDZ83315.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4045] gi|208738597|gb|EDZ86279.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4042] gi|209157713|gb|ACI35146.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4115] gi|209758168|gb|ACI77396.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209758170|gb|ACI77397.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209758172|gb|ACI77398.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209758176|gb|ACI77400.1| octaprenyl diphosphate synthase [Escherichia coli] gi|217319685|gb|EEC28110.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. TW14588] gi|254594536|gb|ACT73897.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. TW14359] gi|320189540|gb|EFW64199.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC1212] gi|320640258|gb|EFX09830.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. G5101] gi|320645555|gb|EFX14564.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str. 493-89] gi|320650865|gb|EFX19322.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str. H 2687] gi|320666771|gb|EFX33750.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. LSU-61] gi|326337887|gb|EGD61721.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. 1125] gi|326347457|gb|EGD71182.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. 1044] Length = 323 Score = 324 bits (832), Expect = 9e-87, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G LK M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLKPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|16762067|ref|NP_457684.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766600|ref|NP_462215.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143556|ref|NP_806898.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415234|ref|YP_152309.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364164|ref|YP_002143801.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205354206|ref|YP_002228007.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858553|ref|YP_002245204.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213053033|ref|ZP_03345911.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426652|ref|ZP_03359402.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213646987|ref|ZP_03377040.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238910099|ref|ZP_04653936.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825815|ref|ZP_06544983.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25314317|pir||AH0903 octaprenyl-diphosphate synthase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421862|gb|AAL22174.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504370|emb|CAD07822.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139191|gb|AAO70758.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129491|gb|AAV78997.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095641|emb|CAR61209.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205273987|emb|CAR38993.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710356|emb|CAR34714.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261248470|emb|CBG26307.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301159854|emb|CBW19373.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|322684901|gb|EFY80899.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323211311|gb|EFZ96155.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323224032|gb|EGA08325.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230319|gb|EGA14438.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323246927|gb|EGA30893.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254140|gb|EGA37960.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|332990163|gb|AEF09146.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 323 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|157162671|ref|YP_001459989.1| octaprenyl diphosphate synthase [Escherichia coli HS] gi|157068351|gb|ABV07606.1| octaprenyl-diphosphate synthase [Escherichia coli HS] Length = 323 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVISEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|323495811|ref|ZP_08100879.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326] gi|323319027|gb|EGA71970.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326] Length = 323 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 135/321 (42%), Positives = 199/321 (61%), Gaps = 1/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKR+RPML + +A L Y+G Sbjct: 4 KAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRIRPMLAVLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V +AL++YG LG AFQL+DDV+DY + ++MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPEDVERALQNYGKYLGTAFQLIDDVMDYTSDGDDMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G++++ + + I ++ LK+ M E +L T +AY KA L L Sbjct: 244 MQNGSEQQASMIREAIEKAN-GMDKLKEILAAMDETGSLEYTRQQAYKEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 +S +K++L+ + + R + Sbjct: 303 EESEYKQALITLAHMSVHRSS 323 >gi|153802102|ref|ZP_01956688.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3] gi|124122346|gb|EAY41089.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3] Length = 348 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 88 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 268 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 269 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQYEADKAIAELAVL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 328 PESEYKQALITLAHMAVNR 346 >gi|187730997|ref|YP_001881898.1| octaprenyl diphosphate synthase [Shigella boydii CDC 3083-94] gi|187427989|gb|ACD07263.1| octaprenyl-diphosphate synthase [Shigella boydii CDC 3083-94] Length = 323 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|238750110|ref|ZP_04611613.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380] gi|238711654|gb|EEQ03869.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380] Length = 323 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 132/321 (41%), Positives = 197/321 (61%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEKIIELTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAILVARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M Sbjct: 63 GNKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTSLESLRVLTLMSDATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AVLANASEEQEVALQNYGRYLGTAFQLIDDLLDYSSDGVTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I G L+ M++ ++L T RA + KA SL+ Sbjct: 243 AMRNGTPEQAAMIRQAIEQGN-GRHLLEPVLFAMQQCKSLDYTRQRAEAEADKAIASLQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP+S+++++L + +QR+ Sbjct: 302 LPESNYRQALEGLAHIAVQRV 322 >gi|16131077|ref|NP_417654.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. MG1655] gi|24114476|ref|NP_708986.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301] gi|30064525|ref|NP_838696.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T] gi|74313724|ref|YP_312143.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046] gi|82545575|ref|YP_409522.1| octaprenyl diphosphate synthase [Shigella boydii Sb227] gi|89109950|ref|AP_003730.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. W3110] gi|110807053|ref|YP_690573.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401] gi|157155105|ref|YP_001464663.1| octaprenyl diphosphate synthase [Escherichia coli E24377A] gi|170018563|ref|YP_001723517.1| octaprenyl diphosphate synthase [Escherichia coli ATCC 8739] gi|170082722|ref|YP_001732042.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. DH10B] gi|170765991|ref|ZP_02900802.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627] gi|188492215|ref|ZP_02999485.1| polyprenyl synthetase [Escherichia coli 53638] gi|194434492|ref|ZP_03066752.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012] gi|194439175|ref|ZP_03071256.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1] gi|209920662|ref|YP_002294746.1| octaprenyl diphosphate synthase [Escherichia coli SE11] gi|218555757|ref|YP_002388670.1| octaprenyl diphosphate synthase [Escherichia coli IAI1] gi|218696892|ref|YP_002404559.1| octaprenyl diphosphate synthase [Escherichia coli 55989] gi|218701956|ref|YP_002409585.1| octaprenyl diphosphate synthase [Escherichia coli IAI39] gi|218706807|ref|YP_002414326.1| octaprenyl diphosphate synthase [Escherichia coli UMN026] gi|238902289|ref|YP_002928085.1| octaprenyl diphosphate synthase [Escherichia coli BW2952] gi|253771979|ref|YP_003034810.1| octaprenyl diphosphate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163129|ref|YP_003046237.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606] gi|256018894|ref|ZP_05432759.1| octaprenyl diphosphate synthase [Shigella sp. D9] gi|256024238|ref|ZP_05438103.1| octaprenyl diphosphate synthase [Escherichia sp. 4_1_40B] gi|260857314|ref|YP_003231205.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str. 11368] gi|260869938|ref|YP_003236340.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str. 11128] gi|291284561|ref|YP_003501379.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str. CB9615] gi|293406796|ref|ZP_06650722.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412] gi|298382537|ref|ZP_06992134.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302] gi|300817559|ref|ZP_07097775.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300823848|ref|ZP_07103972.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300897953|ref|ZP_07116330.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300904377|ref|ZP_07122226.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300918947|ref|ZP_07135503.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300926070|ref|ZP_07141891.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|300929881|ref|ZP_07145324.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|300938101|ref|ZP_07152876.1| polyprenyl synthetase [Escherichia coli MS 21-1] gi|300948840|ref|ZP_07162906.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300955774|ref|ZP_07168117.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|301022044|ref|ZP_07185986.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|301025932|ref|ZP_07189417.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|301301753|ref|ZP_07207887.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|301326382|ref|ZP_07219744.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|307139873|ref|ZP_07499229.1| octaprenyl diphosphate synthase [Escherichia coli H736] gi|307313108|ref|ZP_07592734.1| Trans-hexaprenyltranstransferase [Escherichia coli W] gi|309793766|ref|ZP_07688192.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|312968475|ref|ZP_07782684.1| polyprenyl synthetase family protein [Escherichia coli 2362-75] gi|312972539|ref|ZP_07786713.1| polyprenyl synthetase family protein [Escherichia coli 1827-70] gi|331643885|ref|ZP_08345016.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H736] gi|331648987|ref|ZP_08350075.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M605] gi|331654791|ref|ZP_08355791.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M718] gi|331670014|ref|ZP_08370859.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA271] gi|331679266|ref|ZP_08379938.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H591] gi|332279982|ref|ZP_08392395.1| octaprenyl diphosphate synthase [Shigella sp. D9] gi|83286883|sp|P0AD57|ISPB_ECOLI RecName: Full=Octaprenyl-diphosphate synthase; AltName: Full=All-trans-octaprenyl-diphosphate synthase; AltName: Full=Octaprenyl pyrophosphate synthase; Short=OPP synthase gi|83286884|sp|P0AD58|ISPB_SHIFL RecName: Full=Octaprenyl-diphosphate synthase; AltName: Full=All-trans-octaprenyl-diphosphate synthase; AltName: Full=Octaprenyl pyrophosphate synthase; Short=OPP synthase gi|606125|gb|AAA57988.1| ORF_o323 [Escherichia coli str. K-12 substr. MG1655] gi|1789578|gb|AAC76219.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. MG1655] gi|24053659|gb|AAN44693.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301] gi|30042784|gb|AAP18507.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T] gi|73857201|gb|AAZ89908.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046] gi|81246986|gb|ABB67694.1| octaprenyl diphosphate synthase [Shigella boydii Sb227] gi|85675981|dbj|BAE77231.1| octaprenyl diphosphate synthase [Escherichia coli str. K12 substr. W3110] gi|110616601|gb|ABF05268.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401] gi|157077135|gb|ABV16843.1| octaprenyl-diphosphate synthase [Escherichia coli E24377A] gi|169753491|gb|ACA76190.1| Polyprenyl synthetase [Escherichia coli ATCC 8739] gi|169890557|gb|ACB04264.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. DH10B] gi|170125137|gb|EDS94068.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627] gi|188487414|gb|EDU62517.1| polyprenyl synthetase [Escherichia coli 53638] gi|194417271|gb|EDX33380.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012] gi|194421871|gb|EDX37877.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1] gi|209758174|gb|ACI77399.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209913921|dbj|BAG78995.1| octaprenyl-diphosphate synthase [Escherichia coli SE11] gi|218353624|emb|CAU99827.1| octaprenyl diphosphate synthase [Escherichia coli 55989] gi|218362525|emb|CAR00149.1| octaprenyl diphosphate synthase [Escherichia coli IAI1] gi|218371942|emb|CAR19798.1| octaprenyl diphosphate synthase [Escherichia coli IAI39] gi|218433904|emb|CAR14821.1| octaprenyl diphosphate synthase [Escherichia coli UMN026] gi|238861931|gb|ACR63929.1| octaprenyl diphosphate synthase [Escherichia coli BW2952] gi|242378730|emb|CAQ33520.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)] gi|253323023|gb|ACT27625.1| Trans-hexaprenyltranstransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975030|gb|ACT40701.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606] gi|253979186|gb|ACT44856.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)] gi|257755963|dbj|BAI27465.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str. 11368] gi|257766294|dbj|BAI37789.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str. 11128] gi|260447786|gb|ACX38208.1| Polyprenyl synthetase [Escherichia coli DH1] gi|281180229|dbj|BAI56559.1| octaprenyl-diphosphate synthase [Escherichia coli SE15] gi|281602570|gb|ADA75554.1| Octaprenyl-diphosphate synthase [Shigella flexneri 2002017] gi|284923209|emb|CBG36303.1| octaprenyl-diphosphate synthase [Escherichia coli 042] gi|290764434|gb|ADD58395.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str. CB9615] gi|291426802|gb|EFE99834.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412] gi|298277677|gb|EFI19193.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302] gi|299879904|gb|EFI88115.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|300317358|gb|EFJ67142.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|300358334|gb|EFJ74204.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300397718|gb|EFJ81256.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|300403684|gb|EFJ87222.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300413928|gb|EFJ97238.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300417874|gb|EFK01185.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|300451683|gb|EFK15303.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300456907|gb|EFK20400.1| polyprenyl synthetase [Escherichia coli MS 21-1] gi|300462199|gb|EFK25692.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|300523616|gb|EFK44685.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300529857|gb|EFK50919.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300842734|gb|EFK70494.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|300846914|gb|EFK74674.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|306907019|gb|EFN37527.1| Trans-hexaprenyltranstransferase [Escherichia coli W] gi|308122723|gb|EFO59985.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|309703613|emb|CBJ02953.1| octaprenyl-diphosphate synthase [Escherichia coli ETEC H10407] gi|310334916|gb|EFQ01121.1| polyprenyl synthetase family protein [Escherichia coli 1827-70] gi|312286693|gb|EFR14604.1| polyprenyl synthetase family protein [Escherichia coli 2362-75] gi|313648570|gb|EFS13012.1| polyprenyl synthetase family protein [Shigella flexneri 2a str. 2457T] gi|315062493|gb|ADT76820.1| octaprenyl diphosphate synthase [Escherichia coli W] gi|315137773|dbj|BAJ44932.1| conserved hypothetical protein [Escherichia coli DH1] gi|315257114|gb|EFU37082.1| polyprenyl synthetase [Escherichia coli MS 85-1] gi|315617270|gb|EFU97879.1| polyprenyl synthetase family protein [Escherichia coli 3431] gi|320174552|gb|EFW49688.1| Octaprenyl-diphosphate synthase [Shigella dysenteriae CDC 74-1112] gi|320181462|gb|EFW56380.1| Octaprenyl-diphosphate synthase [Shigella boydii ATCC 9905] gi|320186674|gb|EFW61398.1| Octaprenyl-diphosphate synthase [Shigella flexneri CDC 796-83] gi|320194672|gb|EFW69302.1| Octaprenyl-diphosphate synthase [Escherichia coli WV_060327] gi|320202101|gb|EFW76676.1| Octaprenyl-diphosphate synthase [Escherichia coli EC4100B] gi|320656246|gb|EFX24158.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661936|gb|EFX29344.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str. USDA 5905] gi|323154401|gb|EFZ40602.1| polyprenyl synthetase family protein [Escherichia coli EPECa14] gi|323165148|gb|EFZ50938.1| polyprenyl synthetase family protein [Shigella sonnei 53G] gi|323173553|gb|EFZ59182.1| polyprenyl synthetase family protein [Escherichia coli LT-68] gi|323178637|gb|EFZ64213.1| polyprenyl synthetase family protein [Escherichia coli 1180] gi|323183141|gb|EFZ68539.1| polyprenyl synthetase family protein [Escherichia coli 1357] gi|323189192|gb|EFZ74476.1| polyprenyl synthetase family protein [Escherichia coli RN587/1] gi|323376919|gb|ADX49187.1| Polyprenyl synthetase [Escherichia coli KO11] gi|323936119|gb|EGB32413.1| polyprenyl synthetase [Escherichia coli E1520] gi|323941713|gb|EGB37892.1| polyprenyl synthetase [Escherichia coli E482] gi|323946959|gb|EGB42975.1| polyprenyl synthetase [Escherichia coli H120] gi|323970250|gb|EGB65521.1| polyprenyl synthetase [Escherichia coli TA007] gi|323979096|gb|EGB74174.1| polyprenyl synthetase [Escherichia coli TW10509] gi|324018330|gb|EGB87549.1| polyprenyl synthetase [Escherichia coli MS 117-3] gi|324119552|gb|EGC13434.1| polyprenyl synthetase [Escherichia coli E1167] gi|330909241|gb|EGH37755.1| octaprenyl-diphosphate synthase [Escherichia coli AA86] gi|331037356|gb|EGI09580.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H736] gi|331042734|gb|EGI14876.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M605] gi|331048173|gb|EGI20250.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M718] gi|331062927|gb|EGI34841.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA271] gi|331073331|gb|EGI44654.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H591] gi|332086238|gb|EGI91396.1| polyprenyl synthetase family protein [Shigella boydii 5216-82] gi|332086522|gb|EGI91669.1| polyprenyl synthetase family protein [Shigella dysenteriae 155-74] gi|332090693|gb|EGI95787.1| polyprenyl synthetase family protein [Shigella boydii 3594-74] gi|332102334|gb|EGJ05680.1| octaprenyl diphosphate synthase [Shigella sp. D9] gi|332345144|gb|AEE58478.1| polyprenyl synthetase [Escherichia coli UMNK88] gi|332752346|gb|EGJ82736.1| polyprenyl synthetase family protein [Shigella flexneri 4343-70] gi|332752872|gb|EGJ83257.1| polyprenyl synthetase family protein [Shigella flexneri K-671] gi|332754473|gb|EGJ84839.1| polyprenyl synthetase family protein [Shigella flexneri 2747-71] gi|332765183|gb|EGJ95410.1| octaprenyl-diphosphate synthase [Shigella flexneri 2930-71] gi|332998829|gb|EGK18425.1| polyprenyl synthetase family protein [Shigella flexneri VA-6] gi|332999266|gb|EGK18852.1| polyprenyl synthetase family protein [Shigella flexneri K-272] gi|333000017|gb|EGK19600.1| polyprenyl synthetase family protein [Shigella flexneri K-218] gi|333014533|gb|EGK33880.1| polyprenyl synthetase family protein [Shigella flexneri K-304] gi|333014990|gb|EGK34334.1| polyprenyl synthetase family protein [Shigella flexneri K-227] Length = 323 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|295097675|emb|CBK86765.1| Geranylgeranyl pyrophosphate synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 323 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGCSEAQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I G L+ M +L T RA KA +++ Sbjct: 243 AMRNGTPEQAKMIREAIEQGN-GRHLLEPVLETMAICGSLEWTRQRAEEEADKAIAAIQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDS W+ +L+ + +QR Sbjct: 302 IPDSPWRDALIGLAHIAVQR 321 >gi|238761751|ref|ZP_04622725.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638] gi|238699865|gb|EEP92608.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638] Length = 323 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 130/320 (40%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + DLT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEKIIDLTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M Sbjct: 63 GTKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTSLESLRVLTLMSAATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ L++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILSDATPEQELTLQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I +G L+ + M++ +L T RA KA +L+ Sbjct: 243 AMRNGTSEQAAMIRQAIEEGN-GRHLLEPVLVAMQQCGSLDYTRQRAEEEADKAIAALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S ++ +L + +QR Sbjct: 302 LPESEYRLALEGLAHIAVQR 321 >gi|306816471|ref|ZP_07450603.1| octaprenyl diphosphate synthase [Escherichia coli NC101] gi|222034904|emb|CAP77647.1| Octaprenyl-diphosphate synthase [Escherichia coli LF82] gi|305850036|gb|EFM50495.1| octaprenyl diphosphate synthase [Escherichia coli NC101] gi|312947744|gb|ADR28571.1| octaprenyl diphosphate synthase [Escherichia coli O83:H1 str. NRG 857C] Length = 323 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNVHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALVGLAHIAVQR 321 >gi|26249771|ref|NP_755811.1| octaprenyl diphosphate synthase [Escherichia coli CFT073] gi|26110199|gb|AAN82385.1|AE016767_145 Octaprenyl-diphosphate synthase [Escherichia coli CFT073] Length = 323 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALVSLAHIAVQR 321 >gi|229512636|ref|ZP_04402105.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] gi|229350313|gb|EEO15264.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] Length = 323 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 244 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQYEADKAIAELAVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 303 PESEYKQALITLAHMAVNR 321 >gi|170683435|ref|YP_001745459.1| octaprenyl diphosphate synthase [Escherichia coli SMS-3-5] gi|170521153|gb|ACB19331.1| octaprenyl-diphosphate synthase [Escherichia coli SMS-3-5] Length = 323 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKNIG+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNIGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|85714244|ref|ZP_01045232.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] gi|85698691|gb|EAQ36560.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] Length = 336 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 178/322 (55%), Positives = 227/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y Sbjct: 15 IDQLVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLAGYS 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV LA ++EF+HTATLLHDDVVD+S LRRGK++AR+VWGN+ SVLVGDFLL QAF M Sbjct: 75 GEGHVKLAASVEFMHTATLLHDDVVDESELRRGKLSARMVWGNEASVLVGDFLLGQAFRM 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV Sbjct: 135 MVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G + A S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L Sbjct: 195 PVLGGRPKAEETAAASFGMNLGIAFQLVDDVLDYGGKSAKLGKNVGDDFREGKITLPVVL 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW + +G+I +L A +M ++RAL DT RA YG A D+L Sbjct: 255 AFRRGNDVEREFWVRALEEGRIGDSDLNHAIGLMTKHRALEDTLNRAQHYGAMAVDALAL 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P S K +L +VV FCL R + Sbjct: 315 FPPSPMKSALEQVVAFCLMRSH 336 >gi|269960912|ref|ZP_06175282.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3] gi|269834352|gb|EEZ88441.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3] Length = 323 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 130/321 (40%), Positives = 194/321 (60%), Gaps = 1/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A ++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPEEVEVAFQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T + I ++ L+ +M+E +L T +A KA L L Sbjct: 244 MRNTTPENAQMIREAIEKAN-GMDRLEDILAVMQEAGSLEYTTQKAMDEADKAIAELAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P+S +K++L+ + ++R + Sbjct: 303 PESDYKQALITLAHMAVKRTS 323 >gi|254225991|ref|ZP_04919591.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51] gi|254291338|ref|ZP_04962132.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226] gi|125621447|gb|EAZ49781.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51] gi|150422794|gb|EDN14747.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226] Length = 348 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 88 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 268 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 269 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAVL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 328 PESEYKQALITLAHMAVNR 346 >gi|217977299|ref|YP_002361446.1| Polyprenyl synthetase [Methylocella silvestris BL2] gi|217502675|gb|ACK50084.1| Polyprenyl synthetase [Methylocella silvestris BL2] Length = 337 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 176/320 (55%), Positives = 231/320 (72%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLATA + YR Sbjct: 16 IEPLVALVSADMERVNQTILSRTASDVSMIPEVANHLISSGGKRLRPMLTLATAGLCNYR 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV LA ++EF+HTATLLHDDVVD+S +RRGK+AAR++WGN+ SVLVGDFLL QAF M Sbjct: 76 GAGHVKLAASVEFMHTATLLHDDVVDESDMRRGKLAARMLWGNEASVLVGDFLLGQAFKM 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S L+ LS A +AEGE+ QLS +K+ + +E+DYL VI++KTA LF AA EV Sbjct: 136 MVEVGSLPCLDVLSAAAAVIAEGEVMQLSAAKDTETSEDDYLAVIRAKTAALFGAAAEVG 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+AG + A + YG+NLG+AFQL+DD LDY G ++GKN+G+DFR GK TLPV+L Sbjct: 196 PLLAGRPKAEIAACRGYGLNLGVAFQLIDDALDYGGASAKLGKNVGDDFREGKITLPVVL 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +F+RGT +++FW+ T+ G+I+ +L+ A M ++RAL DT RA YG A+D+L Sbjct: 256 SFRRGTAEQRDFWRRTLERGEIADSDLEIAIATMHKHRALEDTVERARHYGAMARDALEL 315 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S WK +L VVDFC+ R Sbjct: 316 FPASPWKFALSNVVDFCVSR 335 >gi|269964673|ref|ZP_06178911.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B] gi|269830572|gb|EEZ84793.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B] Length = 323 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ + Sbjct: 124 TELGSMKILKLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPEHVEIAMQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T + I ++ L++ +M+E +L T +A KA L L Sbjct: 244 MRNTTPENAIMIREAIEKAN-GMDRLEEILAVMKEAGSLEYTTQKALEEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 P+S +K++L+ + +QR Sbjct: 303 PESEYKQALVTLAHVAVQRT 322 >gi|91212610|ref|YP_542596.1| octaprenyl diphosphate synthase [Escherichia coli UTI89] gi|110643427|ref|YP_671157.1| octaprenyl diphosphate synthase [Escherichia coli 536] gi|117625480|ref|YP_858803.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1] gi|191174477|ref|ZP_03035977.1| octaprenyl-diphosphate synthase [Escherichia coli F11] gi|218560257|ref|YP_002393170.1| octaprenyl diphosphate synthase [Escherichia coli S88] gi|218691477|ref|YP_002399689.1| octaprenyl diphosphate synthase [Escherichia coli ED1a] gi|227887908|ref|ZP_04005713.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972] gi|300980004|ref|ZP_07174826.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|300990877|ref|ZP_07179365.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|301047968|ref|ZP_07195012.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|331659474|ref|ZP_08360416.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA206] gi|91074184|gb|ABE09065.1| octaprenyl diphosphate synthase [Escherichia coli UTI89] gi|110345019|gb|ABG71256.1| octaprenyl-diphosphate synthase [Escherichia coli 536] gi|115514604|gb|ABJ02679.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1] gi|190905232|gb|EDV64871.1| octaprenyl-diphosphate synthase [Escherichia coli F11] gi|218367026|emb|CAR04797.1| octaprenyl diphosphate synthase [Escherichia coli S88] gi|218429041|emb|CAR09987.2| octaprenyl diphosphate synthase [Escherichia coli ED1a] gi|227835304|gb|EEJ45770.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972] gi|294490790|gb|ADE89546.1| octaprenyl-diphosphate synthase [Escherichia coli IHE3034] gi|300300164|gb|EFJ56549.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|300307867|gb|EFJ62387.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|300407044|gb|EFJ90582.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|307555280|gb|ADN48055.1| octaprenyl-diphosphate synthase [Escherichia coli ABU 83972] gi|307625214|gb|ADN69518.1| octaprenyl diphosphate synthase [Escherichia coli UM146] gi|315288960|gb|EFU48358.1| polyprenyl synthetase [Escherichia coli MS 110-3] gi|315294881|gb|EFU54220.1| polyprenyl synthetase [Escherichia coli MS 153-1] gi|315297896|gb|EFU57166.1| polyprenyl synthetase [Escherichia coli MS 16-3] gi|323951294|gb|EGB47169.1| polyprenyl synthetase [Escherichia coli H252] gi|323957666|gb|EGB53380.1| polyprenyl synthetase [Escherichia coli H263] gi|324008745|gb|EGB77964.1| polyprenyl synthetase [Escherichia coli MS 57-2] gi|324012137|gb|EGB81356.1| polyprenyl synthetase [Escherichia coli MS 60-1] gi|331054056|gb|EGI26085.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA206] Length = 323 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALVGLAHIAVQR 321 >gi|319406067|emb|CBI79697.1| octaprenyl-diphosphate synthase [Bartonella sp. AR 15-3] Length = 337 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 169/319 (52%), Positives = 231/319 (72%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L LT +DM++VN LI+ S+V MIP++ YLI SGGKR+RPM+TLATA M EY+GD Sbjct: 19 LFSLTKEDMKRVNQLIISMAKSNVTMIPEISNYLISSGGKRIRPMITLATAHMFEYQGDE 78 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ S+LVGDFLL QAF M+++ Sbjct: 79 HIKLATAVEFMHTATLLHDDVVDESELRRGKSTARILWGNQASILVGDFLLGQAFKMMVD 138 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S EAL LS A +AEGE+ QLS +KN++ DYL +IK+KTA LFSAA E+ +I Sbjct: 139 VGSLEALSVLSNAAAIIAEGEVMQLSAAKNIETNVSDYLKIIKAKTAALFSAAAEIGPII 198 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + R AL YG++LG+AFQL+DDVLDY +GKNIG+DFR GK T+PVIL++ Sbjct: 199 AGYGHEERSALHQYGLSLGLAFQLIDDVLDYSSNTQYLGKNIGDDFREGKITMPVILSYT 258 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG EK FWK + + + E+LK A ++ + L+DT +A YG++A D+L + + Sbjct: 259 RGNDTEKTFWKQALENNHNNDESLKHAQHLIEKYNGLIDTIEQARIYGKRAIDALSSIKE 318 Query: 304 SSWKKSLMEVVDFCLQRLN 322 + K +L++++DFC++R+N Sbjct: 319 NPAKNALIDIIDFCIERVN 337 >gi|82778501|ref|YP_404850.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197] gi|309785515|ref|ZP_07680146.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617] gi|81242649|gb|ABB63359.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197] gi|308926635|gb|EFP72111.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617] Length = 323 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNIIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|238787578|ref|ZP_04631376.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641] gi|238724365|gb|EEQ16007.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641] Length = 323 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEKIIELTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M Sbjct: 63 GNKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L ++ +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTSLESLRVLTLMAAATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AVLADASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L+ + M++ +L T RA KA SL+ Sbjct: 243 AMHNGTPEQTAMIRQAIEQGN-GRHLLEPVLLAMQQCGSLDYTRQRAEEEADKAIASLQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS ++++L + +QR Sbjct: 302 LPDSDYRQALEGLAHIAVQR 321 >gi|323136700|ref|ZP_08071781.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242] gi|322398017|gb|EFY00538.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242] Length = 336 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 167/321 (52%), Positives = 229/321 (71%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L D+E+ N LI++R SDV IP+V +LI +GGKRLRPML LATA M Y+ Sbjct: 15 LDSLLTLIGPDLERTNQLIIQRTGSDVTTIPEVANHLISAGGKRLRPMLVLATAGMCGYK 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEF+HTATLLHDDVVD+S +RRGK+AAR++WGNQT VLVGDFLL AF M Sbjct: 75 GDGHLKFAAGIEFMHTATLLHDDVVDESNMRRGKIAARMLWGNQTCVLVGDFLLGHAFKM 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E L +S A +AEGE+ QL+ +K+ TE+ Y+ VI+ KTA LF+AA EV Sbjct: 135 MVEPGMVPPLTVVSQAAAVIAEGEILQLNAAKDTTTTEDAYMAVIRRKTAELFAAAAEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + A +SYGMNLGIAFQL+DD LDY G ++GKN+G+DFR GK TLPV+L Sbjct: 195 VMLANKPKADEAAARSYGMNLGIAFQLIDDALDYGGSSAKLGKNVGDDFREGKITLPVVL 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG ++E+ FW+ T+ G+I+ +++ A +M++++AL DT RA YG A+D++ Sbjct: 255 AFRRGNEKEREFWRRTLEKGEINDGDVETACGLMKKHKALDDTIERAAHYGAIARDAMEI 314 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 P S WK +L+EVVDFC++R+ Sbjct: 315 FPASPWKSALLEVVDFCIERV 335 >gi|123440796|ref|YP_001004787.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087757|emb|CAL10543.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 323 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + DLT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEKIIDLTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M Sbjct: 63 GTKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTSLESLRVLTLMSDATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AVLSDATEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I +G L+ + M++ +L T RA KA +L+ Sbjct: 243 AMHNGTPEQAAMIRQAIEEGN-GRHLLEPVLVAMQQCGSLDYTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S ++ +L + +QR Sbjct: 302 LPESDYRLALEGLAHIAVQR 321 >gi|193065379|ref|ZP_03046450.1| octaprenyl-diphosphate synthase [Escherichia coli E22] gi|260846000|ref|YP_003223778.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str. 12009] gi|192927020|gb|EDV81643.1| octaprenyl-diphosphate synthase [Escherichia coli E22] gi|257761147|dbj|BAI32644.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str. 12009] gi|323162879|gb|EFZ48714.1| polyprenyl synthetase family protein [Escherichia coli E128010] Length = 323 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVQEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|323493611|ref|ZP_08098732.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546] gi|323312134|gb|EGA65277.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546] Length = 323 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 135/321 (42%), Positives = 193/321 (60%), Gaps = 1/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKR+RP+L + +A L Y+G Sbjct: 4 KAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIVSGGGKRIRPLLAVLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 EAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSLKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILNEAPAEVELALQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT+ + + I +E L M E +L T +AY KA L L Sbjct: 244 MEHGTEEQTQMIREAIEKAN-GMERLNDILATMEETGSLEYTRKKAYQEADKAIAELDVL 302 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 DS +K++L+ + + R + Sbjct: 303 DDSVYKQALITLAHMSVHRSS 323 >gi|258627044|ref|ZP_05721842.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603] gi|258580718|gb|EEW05669.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603] Length = 348 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 188/319 (58%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y G Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYHG 88 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 268 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 269 MQHGNAEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKAQHEADKAIAELAIL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 328 PESEYKQALITLAHMAVNR 346 >gi|28897101|ref|NP_796706.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD 2210633] gi|28805310|dbj|BAC58590.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD 2210633] Length = 333 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 14 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 73 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 74 TGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 133 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ + Sbjct: 134 TELGSMKILQLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 193 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 194 ILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 253 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T + I +E L + +M+E +L T +A KA L L Sbjct: 254 MRNTTPENALMIREAIEKAN-GMERLDEILAVMKEAGSLEYTTQKALEEADKAIAELEVL 312 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 P+S +K++L+ + ++R Sbjct: 313 PESEYKEALITLAHVAVKRT 332 >gi|229525127|ref|ZP_04414532.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|229338708|gb|EEO03725.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|327483290|gb|AEA77697.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4] Length = 323 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 244 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 303 PESEYKQALITLAHMAVNR 321 >gi|15640461|ref|NP_230088.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590773|ref|ZP_01678102.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80] gi|121727265|ref|ZP_01680424.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52] gi|147674613|ref|YP_001218702.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395] gi|153819559|ref|ZP_01972226.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457] gi|153822596|ref|ZP_01975263.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33] gi|153830825|ref|ZP_01983492.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39] gi|227080645|ref|YP_002809196.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2] gi|254850665|ref|ZP_05240015.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10] gi|298501034|ref|ZP_07010835.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757] gi|9654858|gb|AAF93607.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547375|gb|EAX57489.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80] gi|121630384|gb|EAX62779.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52] gi|126509895|gb|EAZ72489.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457] gi|126519900|gb|EAZ77123.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33] gi|146316496|gb|ABQ21035.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395] gi|148873684|gb|EDL71819.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39] gi|227008533|gb|ACP04745.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2] gi|227012288|gb|ACP08498.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395] gi|254846370|gb|EET24784.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10] gi|297540282|gb|EFH76342.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757] Length = 348 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 88 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 268 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 269 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAIL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 328 PESEYKQALITLAHMAVNR 346 >gi|163802656|ref|ZP_02196547.1| malate dehydrogenase [Vibrio sp. AND4] gi|159173544|gb|EDP58364.1| malate dehydrogenase [Vibrio sp. AND4] Length = 323 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 132/321 (41%), Positives = 197/321 (61%), Gaps = 1/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYHG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL N D TEE+Y+ VI SKTA LF +A ++ + Sbjct: 124 TELGSIKILKLMSDAVNVIAEGEVQQLMNCNNPDTTEENYMQVIYSKTARLFESATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ +V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPENVEVALQNYGKFLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 T + I ++ L++ +M++ +L TE +A KA L L Sbjct: 244 MHNTTPENAAMIREAIEKAN-GMDRLEEILAVMQDAGSLAYTEQKAVEEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P+S +K++L+ + ++R + Sbjct: 303 PESDYKQALITLAHMAVKRTS 323 >gi|215488503|ref|YP_002330934.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str. E2348/69] gi|215266575|emb|CAS11014.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str. E2348/69] Length = 323 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAIGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|297580574|ref|ZP_06942500.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385] gi|297534990|gb|EFH73825.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385] Length = 348 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 29 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 88 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 89 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 148 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 149 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 208 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 209 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 268 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 269 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAAL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 328 PESEYKQALITLAHMAVNR 346 >gi|193070326|ref|ZP_03051269.1| octaprenyl-diphosphate synthase [Escherichia coli E110019] gi|192956385|gb|EDV86845.1| octaprenyl-diphosphate synthase [Escherichia coli E110019] Length = 323 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILVGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|229507073|ref|ZP_04396579.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|229508772|ref|ZP_04398264.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229519759|ref|ZP_04409202.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229519996|ref|ZP_04409425.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] gi|229530278|ref|ZP_04419666.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] gi|229606271|ref|YP_002876919.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|255743817|ref|ZP_05417774.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262167602|ref|ZP_06035306.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] gi|229332051|gb|EEN97539.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] gi|229342945|gb|EEO07934.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] gi|229344448|gb|EEO09423.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229354175|gb|EEO19106.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229355818|gb|EEO20738.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|229368926|gb|ACQ59349.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|255738566|gb|EET93954.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262023938|gb|EEY42635.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] Length = 323 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 244 MQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 303 PESEYKQALITLAHMAVNR 321 >gi|238756420|ref|ZP_04617729.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473] gi|238705350|gb|EEP97758.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473] Length = 323 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L+Y+ Sbjct: 3 LEQIIELTAQDMAAVNATILDQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALDYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M Sbjct: 63 GNKHIKIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L+ +S +AEGE+ QL N D+TE+ Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLQLMSEATNVIAEGEVMQLMNCNNPDITEDSYMRVIYSKTARLFEAASQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++A A + YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++ Sbjct: 183 SILADASPEQEMAFQDYGRYLGTAFQLIDDLLDYSADGSTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I +G L+ MR+ +L T RA KA +L+ Sbjct: 243 AMNNGTAEQAAMIRKAIEEGN-GRHLLEPVLEAMRQCGSLDYTRQRAEEEADKAIAALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ ++++L + +QR Sbjct: 302 LPDTPYRQALEGLAHIAVQR 321 >gi|146313257|ref|YP_001178331.1| octaprenyl diphosphate synthase [Enterobacter sp. 638] gi|145320133|gb|ABP62280.1| Trans-hexaprenyltranstransferase [Enterobacter sp. 638] Length = 323 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +LT +DM VN +IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LDKINELTAQDMAGVNAVILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDAHVNIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTEAQERGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G+ + + I G L+ M +L T RA KA +++ Sbjct: 243 AMRNGSPDQAKLIREAIEQGN-GRHLLEPVLETMAICGSLEWTRQRAEEEADKAITAIQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDS W+ +L+ + +QR Sbjct: 302 IPDSPWRDALIGLAHIAVQR 321 >gi|261250197|ref|ZP_05942773.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] gi|260939313|gb|EEX95299.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] Length = 345 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 133/321 (41%), Positives = 193/321 (60%), Gaps = 1/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKR+RP+L + +A L Y+G Sbjct: 26 KAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIVSGGGKRIRPLLAVLSARALGYQG 85 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 86 EAHTTSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 145 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ + Sbjct: 146 TELGSLKILKLMSDAVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 205 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V AL++YG LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 206 ILNDAPEDVELALQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYA 265 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + I +E L M + +L T +AY KA L L Sbjct: 266 MKNGSAEQTAMIREAIEKAN-GMERLNDILAAMEQTGSLEYTRQKAYQEADKAIAELNVL 324 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 +S +K++L+ + + R + Sbjct: 325 EESVYKQALVTIAHMAVHRTS 345 >gi|208809557|ref|ZP_03251894.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4206] gi|208729358|gb|EDZ78959.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4206] Length = 324 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 136/319 (42%), Positives = 194/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y G Sbjct: 5 KKYNELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEG 64 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+ Sbjct: 65 NAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMM 124 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 125 TSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSG 184 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ A Sbjct: 185 ILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHA 244 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 GT + ++ I G LK M +L T RA KA +L+ L Sbjct: 245 MHHGTPEQAQMIRTAIEQGN-GRHLLKPVLEAMNACGSLEWTRQRAEEEADKAIAALQVL 303 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PD+ W+++L+ + +QR Sbjct: 304 PDTPWREALIGLAHIAVQR 322 >gi|90425826|ref|YP_534196.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB18] gi|90107840|gb|ABD89877.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB18] Length = 336 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 176/322 (54%), Positives = 230/322 (71%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +L DME+VN +IL R S+V MIP+V +LI SGGKRLRP LTLA A + Y Sbjct: 15 IDQLVELVAADMERVNAVILSRTGSEVTMIPEVANHLISSGGKRLRPNLTLAMAQLTGYS 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M Sbjct: 75 GEGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRM 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV Sbjct: 135 MVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 IAG + + A +S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L Sbjct: 195 PAIAGRPKAEQSACRSFGMNLGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW + G+I+ +L +A +M ++RAL DT RA+ YG A D+L Sbjct: 255 AFRRGNDAERAFWIKALERGEITEPDLDQAIGLMTKHRALEDTIQRAHHYGAMAVDALAL 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P S K +L +VV FCL R + Sbjct: 315 FPTSPMKAALEQVVAFCLARSH 336 >gi|156973119|ref|YP_001444026.1| octaprenyl-diphosphate synthase [Vibrio harveyi ATCC BAA-1116] gi|156524713|gb|ABU69799.1| hypothetical protein VIBHAR_00798 [Vibrio harveyi ATCC BAA-1116] Length = 323 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 131/321 (40%), Positives = 196/321 (61%), Gaps = 1/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ + Sbjct: 124 TELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ +V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPENVEVALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T + I ++ L+ +M+E +L T +A KA L L Sbjct: 244 MRNTTPENTAMIREAIEKAN-GMDRLEDILAVMQEAGSLEYTTQKALEEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P+S +K++L+ + ++R + Sbjct: 303 PESDYKQALVTLAHMAVKRTS 323 >gi|238783532|ref|ZP_04627554.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970] gi|238715587|gb|EEQ07577.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970] Length = 323 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT DM VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEKIIELTAPDMAAVNTTILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALHYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M Sbjct: 63 GSKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTSLESLRVLTLMSEATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AVLADASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT ++ + I G L+ + M++ +L T RA KA +L+ Sbjct: 243 AMRNGTPEQETMIRQAIEQGS-GRHLLEPVLVAMQQCGSLDYTRQRAEEEADKAIAALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S ++ +L + +QR Sbjct: 302 LPESEYRLALEGLAHIAVQR 321 >gi|323961158|gb|EGB56772.1| polyprenyl synthetase [Escherichia coli H489] Length = 323 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M R+L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACRSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|304393457|ref|ZP_07375385.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130] gi|303294464|gb|EFL88836.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130] Length = 338 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 173/322 (53%), Positives = 235/322 (72%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L LT DM VN LIL + SDVEMIP+V K+LI SGGKRLRPMLTL+ A ML Y Sbjct: 17 IDPLLRLTADDMAAVNTLILSKCGSDVEMIPEVAKHLIDSGGKRLRPMLTLSAARMLGYT 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+HV LA ++EF+HTATLLHDDVVD+S +RRGK +AR+VWGNQ SVLVGDFLL QAF M Sbjct: 77 GDHHVTLAASVEFMHTATLLHDDVVDESDMRRGKQSARMVWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL+ LS + +AEGE+ QLS +++++ TE+DY+ VI+ KTA LFSAA EV Sbjct: 137 MVDAGSMEALDVLSTASMVIAEGEVMQLSAAQSMETTEDDYMAVIRGKTAALFSAACEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A R AL+SYG+NLG+AFQLVDD LDY G ++GKN+G+DF GK TLPV+L Sbjct: 197 PILADAGKPARDALRSYGLNLGLAFQLVDDALDYGGSKADLGKNVGDDFHEGKITLPVLL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RG+ E++FW++ + L A ++++++ A+ DT RA YG+ A+D+L Sbjct: 257 AYRRGSDEERDFWRTNMEADNAGEGALDDAMVLLKKHGAIDDTVARARHYGEMARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP K +L++VVDFC+ R++ Sbjct: 317 LPAGEHKSALLDVVDFCIARVS 338 >gi|262403940|ref|ZP_06080497.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] gi|262349902|gb|EEY99038.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] Length = 323 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 SHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSLKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + V A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCDASSEVELAMQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q G + + I + L + M + +L T +A KA L L Sbjct: 244 MQHGNPEQALMIREAIEKAN-GMSRLNEILAAMEQTGSLRYTIEKAQHEADKAIAELDIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + + R Sbjct: 303 PESEYKQALITLAHMAVNR 321 >gi|262392448|ref|YP_003284302.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] gi|262336042|gb|ACY49837.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] Length = 323 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ + Sbjct: 124 TELGSMKILKLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V A+++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPEHVEIAMQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T + I ++ L+ +M+E +L T +A KA + L L Sbjct: 244 MRNTTPDNALMIREAIEKAN-GMDRLEDILAVMKEAGSLEYTTQKALEEADKAIEELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 P+S +K++L+ + +QR Sbjct: 303 PESEYKQALITLAHVAVQRT 322 >gi|91975694|ref|YP_568353.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB5] gi|91682150|gb|ABE38452.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB5] Length = 336 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 175/322 (54%), Positives = 228/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L DME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + Y Sbjct: 15 IDQLVGLVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPILTLAMANLTGYA 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M Sbjct: 75 GDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRM 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV Sbjct: 135 MVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 IA + + A +S+GMN+GIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L Sbjct: 195 PTIADRPKAEQSACRSFGMNIGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW + G+I+ +L +A +M ++RAL DT RA+ YG A D+L Sbjct: 255 AFRRGNDAERAFWIKALERGEITETDLDQAIALMAKHRALEDTIQRAHHYGAMAVDALAL 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P S K +L +VV FCL R + Sbjct: 315 FPSSPMKTALEQVVAFCLARSH 336 >gi|86748213|ref|YP_484709.1| farnesyltranstransferase [Rhodopseudomonas palustris HaA2] gi|86571241|gb|ABD05798.1| Farnesyltranstransferase [Rhodopseudomonas palustris HaA2] Length = 336 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 176/322 (54%), Positives = 228/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y Sbjct: 15 IDQLVGLVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYA 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA A+EF+HTATLLHDDVVD+S +RRGK +AR++WGN+ SVLVGDFLL QAF M Sbjct: 75 GDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRM 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S AL+ LS + T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV Sbjct: 135 MVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 IA + + A +S+GMN+GIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L Sbjct: 195 PAIADRPKAEQSACRSFGMNIGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW + G+I+ +L +A +M ++RAL DT RA+ YG A D+L Sbjct: 255 AFRRGNDSERAFWIKALERGEITEADLDQAIKLMTKHRALEDTIQRAHHYGAMAVDALAL 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P S K +L +VV FCL R + Sbjct: 315 FPSSPMKTALEQVVAFCLARSH 336 >gi|226329701|ref|ZP_03805219.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198] gi|225202887|gb|EEG85241.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198] Length = 323 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + T L+Y+ Sbjct: 3 LESIIKLTSADMTAVNEAILYQLNSDVSLINQLGYYIISGGGKRIRPMIAVLTGRALDYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M Sbjct: 63 GDKHISVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE+ QL + D++E+DY+ VI SKTA LF AA S Sbjct: 123 MTDLDSMRVLKLMSSATNVIAEGEVLQLMNCNDPDISEDDYMQVIYSKTARLFEAASHAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G +A + YG LG AFQL+DD+LDY + N++GKN G+D GKPTLP++ Sbjct: 183 AILSGATPEQEKAFQDYGRYLGTAFQLIDDLLDYDADNNQLGKNTGDDLDEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + E + I G L M++ +L T +A KA ++L Sbjct: 243 AMHNGNEEESKLIRQAIEQGN-GRHLLDTVLNTMKQCGSLEYTRQKAEEEADKAIEALSI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +P+S +K +L+ + +QR Sbjct: 302 IPNSPYKDALIGLAHVAVQR 321 >gi|92118681|ref|YP_578410.1| farnesyltranstransferase [Nitrobacter hamburgensis X14] gi|91801575|gb|ABE63950.1| Farnesyltranstransferase [Nitrobacter hamburgensis X14] Length = 336 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 177/322 (54%), Positives = 226/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y Sbjct: 15 IDQIVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMAHLAGYS 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA ++EF+HTATLLHDDVVD+S LRRGK++AR+VWGN+ SVLVGDFLL QAF M Sbjct: 75 GEGHIKLAASVEFMHTATLLHDDVVDESELRRGKLSARMVWGNEASVLVGDFLLGQAFRM 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV Sbjct: 135 MVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G + A S+GMNLGIAFQLVDDVLDY G+ ++GKNIG+DFR GK TLPV+L Sbjct: 195 PVLGGRPKAEEMAAASFGMNLGIAFQLVDDVLDYGGKSAKLGKNIGDDFREGKITLPVVL 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW + G+I +L A +M ++RAL DT RA YG A D+L Sbjct: 255 AFRRGNDIEREFWVRALEQGEIGDNDLNHAIGLMTKHRALEDTLNRAQHYGAMAVDALAL 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P S K +L +VV FCL R + Sbjct: 315 FPPSPMKSALEQVVAFCLARSH 336 >gi|261342632|ref|ZP_05970490.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC 35316] gi|288315280|gb|EFC54218.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC 35316] Length = 323 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LDKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G + + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILGGCTDVQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I G L+ M + +L T RA KA +L+ Sbjct: 243 AMRNGTPEQAKMIREAIEQGN-GRHLLEPVLEAMAISGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDS W+ +L+ + +QR Sbjct: 302 IPDSPWRDALIGLAHIAVQR 321 >gi|37528362|ref|NP_931707.1| octaprenyl diphosphate synthase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787800|emb|CAE16915.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 323 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 128/322 (39%), Positives = 194/322 (60%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT DM VN IL ++ SDV +I + Y+I GGKR+RP++ + + +L Y+ Sbjct: 3 LETIIKLTADDMAAVNETILSQLNSDVTLINQLGYYIISGGGKRIRPIIAILASRVLGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A ++GN SVLVGDF+ +++F M Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAMFGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S L+ +S +AEGE+ QL + +++E+DY+ VI SKTA LF A S Sbjct: 123 MTALNSMRVLKLMSEATNVIAEGEVLQLMNCNDPNISEDDYMRVIYSKTARLFEVAAHSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ AL++YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++ Sbjct: 183 AILSNATPEQEMALQNYGRYLGTAFQLIDDLLDYNADSDTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L+ M++ +L T RA KA +L+ Sbjct: 243 AMNHGTPEQSALIREAIEKGN-GRHLLETVLTTMKQCGSLEYTRKRAEEEADKAIAALQA 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L +S +K++L+ + +QRL+ Sbjct: 302 LENSPYKQALVGLAHIAVQRLS 323 >gi|260878015|ref|ZP_05890370.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034] gi|260896382|ref|ZP_05904878.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466] gi|308085175|gb|EFO34870.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466] gi|308090006|gb|EFO39701.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034] gi|328471899|gb|EGF42776.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 10329] Length = 323 Score = 322 bits (825), Expect = 6e-86, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 TGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE++QL + D TEE Y+ VI SKTA LF +A ++ + Sbjct: 124 TELGSMKILQLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T + I +E L + +M+E +L T +A KA L L Sbjct: 244 MRNTTPENALMIREAIEKAN-GMERLDEILAVMKEAGSLEYTTQKALEEADKAIAELEVL 302 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 P+S +K++L+ + ++R Sbjct: 303 PESEYKEALITLAHVAVKRT 322 >gi|331664800|ref|ZP_08365705.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA143] gi|331058048|gb|EGI30030.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA143] Length = 323 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD++W+++L+ + +QR Sbjct: 302 LPDTTWREALIGLAHIAVQR 321 >gi|253991517|ref|YP_003042873.1| octaprenyl diphosphate synthase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638395|emb|CAR67017.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase (opp synthetase) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782967|emb|CAQ86132.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase (opp synthetase) [Photorhabdus asymbiotica] Length = 323 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 130/322 (40%), Positives = 189/322 (58%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT DM VN IL ++ SDV +I + Y+I GGKR+RP++ + A L Y+ Sbjct: 3 LESIIKLTADDMAAVNEAILSQLNSDVALINQLGYYIISGGGKRIRPIIAILAARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M Sbjct: 63 SDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANATFGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S L+ +S +AEGE+ QL + +++E+DY+ VI SKTA LF A S Sbjct: 123 MTTLNSMRVLKLMSEATNVIAEGEVLQLMNCNDPNISEDDYMRVIYSKTARLFEVAAHSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I+ AL+ YG LG AFQL+DD+LDY + N +GKN G+D GKPTLP++ Sbjct: 183 AIISNATPEQETALQDYGRYLGTAFQLIDDLLDYDADSNTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + + I G L+ I M++ +L T RA KA +L+ Sbjct: 243 AMNHGNPEQSQLIRKAIEKGN-GRHLLETVLITMKQCGSLEYTRKRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L S +K++L+ + +QRL+ Sbjct: 302 LESSPYKQALVGLAHIAVQRLS 323 >gi|75676776|ref|YP_319197.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255] gi|74421646|gb|ABA05845.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255] Length = 336 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 178/322 (55%), Positives = 228/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y Sbjct: 15 IDQLVELVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLAGYA 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV LA ++EF+HTATLLHDDVVD+S LRRG+++AR+VWGN+ SVLVGDFLL QAF M Sbjct: 75 GEGHVKLAASVEFMHTATLLHDDVVDESELRRGRLSARMVWGNEASVLVGDFLLGQAFRM 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV Sbjct: 135 MVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G + + A S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+L Sbjct: 195 PVLGGRPKAEQTAAASFGMNLGIAFQLVDDVLDYGGKSAKLGKNVGDDFREGKITLPVVL 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW + GKI +L A +M ++RAL DT RA+ YG A D+L Sbjct: 255 AFRRGNDVEREFWVRALEQGKIGDNDLNHAIGLMTKHRALEDTLNRAHHYGAMAVDALAL 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P S K +L +VV FCL R + Sbjct: 315 FPPSPMKGALEQVVAFCLARSH 336 >gi|192361220|ref|YP_001981260.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107] gi|190687385|gb|ACE85063.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107] Length = 320 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 142/321 (44%), Positives = 199/321 (61%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M + + D VN LI+ ++ SDV ++ ++ YL+ +GGKRLRP+L + A L Y Sbjct: 1 MLPFQQVVKDDFAAVNQLIIDQLHSDVGLVENIGHYLVEAGGKRLRPLLVMLAAKSLGYT 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ LA IEFIHTATLLHDDVVD S LRRG+ A WGN SVLVGDFL S+AF M Sbjct: 61 GKQHLDLAAIIEFIHTATLLHDDVVDMSQLRRGRPTANAQWGNAPSVLVGDFLYSRAFQM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S + + LS T+AEGE++QL +K+ +VTEE+Y VI KTA+LFSAA EV Sbjct: 121 MVAIGSMDVMAILSDTTNTIAEGEVQQLVNAKDPNVTEENYFQVIDKKTAILFSAACEVG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG R+AL+ YG ++GIAFQLVDD LDY G+ +GKN+G+D GKPTLP+I Sbjct: 181 GVIAGANTRQREALRHYGSHVGIAFQLVDDALDYTGDAATLGKNVGDDLAEGKPTLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT+ + +TI G S L +++ + T A +A L+ Sbjct: 241 AMRTGTRAQAELVANTIRTGDAS--QLHAILEVVKATGGMDYTLQAARRQVDQALSQLQT 298 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LPD+++ +++ ++ +F L R Sbjct: 299 LPDNAYSQAMRQLAEFSLART 319 >gi|227113758|ref|ZP_03827414.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 323 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L+Y Sbjct: 3 LEQITALTAQDMAAVNNVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALDYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G + + + I +G L+ M++ +L T RA KA +L+ Sbjct: 243 AMRHGNAEQSSLIRKAIEEGN-GRHLLEPVLSAMQQCGSLDYTRQRAEEEADKAISALQQ 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ ++ +L + +QR Sbjct: 302 LPETPYRMALEGLAHLAVQR 321 >gi|319407551|emb|CBI81201.1| octaprenyl-diphosphate synthase [Bartonella sp. 1-1C] Length = 337 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 168/322 (52%), Positives = 225/322 (69%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L LT +DME VN LI+ S+V +IP++ YLI SGGKR+RPM+TLATA M Y+ Sbjct: 16 LHPLFSLTKEDMECVNQLIISMAQSNVAIIPEISNYLISSGGKRIRPMITLATAHMFGYQ 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ S+LVGDFLL QAF M Sbjct: 76 GDKHIKLATAVEFMHTATLLHDDVVDESELRRGKSTARIIWGNQASILVGDFLLGQAFKM 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL LS A +AEGE+ QLS +KN++ DYL +I +KTA LFSAA EV Sbjct: 136 MVDVGSLDALSVLSNAAAIIAEGEIMQLSAAKNIETNVSDYLKIINAKTAALFSAAAEVG 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG R AL YG++LG+AFQL+DDVLDY +GKNIG+DFR GK T+PVIL Sbjct: 196 PIIAGYGPEERSALHQYGLSLGLAFQLIDDVLDYSSSAQYLGKNIGDDFREGKITMPVIL 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++ RG EK FWK + + E LK A ++ + L DT +A YG++A D+L Sbjct: 256 SYTRGNDIEKIFWKQALENNHNDDEALKHAQQLIEKYDGLTDTIEQARIYGKRAIDALSS 315 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + D+ K +L++++DFC++R+N Sbjct: 316 IKDNPAKNALIDIIDFCIERIN 337 >gi|301644900|ref|ZP_07244870.1| polyprenyl synthetase [Escherichia coli MS 146-1] gi|301076794|gb|EFK91600.1| polyprenyl synthetase [Escherichia coli MS 146-1] Length = 320 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 133/319 (41%), Positives = 195/319 (61%), Gaps = 1/319 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + ++GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQ 319 LPD+ W+++L+ + +Q Sbjct: 302 LPDTPWREALIGLAHIAVQ 320 >gi|304396333|ref|ZP_07378214.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB] gi|308189085|ref|YP_003933216.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1] gi|304355842|gb|EFM20208.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB] gi|308059595|gb|ADO11767.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1] Length = 323 Score = 321 bits (824), Expect = 8e-86, Method: Composition-based stats. Identities = 136/320 (42%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + +A + Y+ Sbjct: 3 LEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISGGGKRIRPMIAVLSARAMGYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDLHVTNAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSMGSLRILALMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAASQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAEATPEEEKALQDYGRYLGTAFQLIDDLLDYSADGETLGKNTGDDLSEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G+ + + I G L+ M + +L T RA KA ++LR Sbjct: 243 AMQHGSPEQAKMIREAIEQGN-GRHLLEPVLEAMNQCGSLEWTRSRAEQEADKAIEALRI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S W+ +L + +QR Sbjct: 302 LPESPWRSALESLAHMSVQR 321 >gi|213582666|ref|ZP_03364492.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 319 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 133/318 (41%), Positives = 195/318 (61%), Gaps = 1/318 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 301 Query: 301 LPDSSWKKSLMEVVDFCL 318 LPD+ W+++L+ + + Sbjct: 302 LPDTPWREALIGLAHIAV 319 >gi|182677848|ref|YP_001831994.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633731|gb|ACB94505.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 336 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 175/322 (54%), Positives = 231/322 (71%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y Sbjct: 15 IERLLALVTPDMERVNQTILSRAASDVTMIPEVANHLISSGGKRLRPMLTLAAAGLCGYG 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA ++EF+HTATLLHDDVVD+S +RRGK+AAR++WGN+ SVLVGDFLL QAF M Sbjct: 75 GNGHIKLAASVEFMHTATLLHDDVVDESDMRRGKLAARMLWGNEASVLVGDFLLGQAFKM 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S LE LS A +AEGE+ QL+ +K+ + E+DYL VI++KTA LF AA EV Sbjct: 135 MVEVGSLACLEVLSTAAAVIAEGEVMQLAAAKDTETGEDDYLAVIRAKTAALFGAAAEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+A + A +SYG+NLGIAFQL+DD LDY G ++GKN+G+DFR GK TLPV+L Sbjct: 195 ALLAERPKAEIAACRSYGLNLGIAFQLIDDALDYGGTSAKLGKNVGDDFREGKITLPVVL 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 F+RGT+ E+ FW+ T+ G+I +L A MR++RA+ DT RA YG A+D+L Sbjct: 255 CFRRGTQDERIFWRRTLEKGEIEEGDLDIAIATMRKHRAIEDTVERARHYGAMARDALEL 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P S WK +L +VVDFC+ R++ Sbjct: 315 FPASPWKIALNDVVDFCVNRIS 336 >gi|213622139|ref|ZP_03374922.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 317 Score = 321 bits (823), Expect = 9e-86, Method: Composition-based stats. Identities = 135/316 (42%), Positives = 194/316 (61%), Gaps = 1/316 (0%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+G+ H Sbjct: 1 NELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAH 60 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 V +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+ Sbjct: 61 VTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSL 120 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S ++A Sbjct: 121 GSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILA 180 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ A + Sbjct: 181 GCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLHAMRH 240 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 GT + ++ I G L+ M +L T RA KA +L+ LPD+ Sbjct: 241 GTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQILPDT 299 Query: 305 SWKKSLMEVVDFCLQR 320 W+++L+ + +QR Sbjct: 300 PWREALIGLAHIAVQR 315 >gi|238797569|ref|ZP_04641066.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969] gi|238718566|gb|EEQ10385.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969] Length = 323 Score = 321 bits (823), Expect = 9e-86, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT DM VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEKIIELTAPDMAAVNTTILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALHYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M Sbjct: 63 GTKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTGLESLRVLTLMSEATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AVLANASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT ++ + I G L+ M++ +L T RA KA +L+ Sbjct: 243 AMRNGTSEQEAMIRQAIEQGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAIAALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S ++ +L + +QR Sbjct: 302 LPESEYRLALEGLAHIAVQR 321 >gi|332160062|ref|YP_004296639.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607378|emb|CBY28876.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp. palearctica Y11] gi|325664292|gb|ADZ40936.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862049|emb|CBX72215.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica W22703] Length = 323 Score = 321 bits (823), Expect = 9e-86, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + DLT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEKIIDLTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M Sbjct: 63 GTKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTSLESLRVLTLMSDATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AVLSDATEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I +G L+ + M++ +L T RA KA +L+ Sbjct: 243 AMHNGTPEQAAMIRQAIEEGN-GRHLLEPVLVAMQQCGSLDYTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S + +L + +QR Sbjct: 302 LPESDHRLALEGLAHIAVQR 321 >gi|300024374|ref|YP_003756985.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299526195|gb|ADJ24664.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 342 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 167/322 (51%), Positives = 226/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L D+E +N +IL + SDVEMIP++ +LI SGGKRLRPML LA+A + Y Sbjct: 21 LEPLLALVADDLEAINRIILDKAVSDVEMIPELAHHLIDSGGKRLRPMLALASAKLCGYG 80 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ A A+EF+HTATLLHDDVVD+SA RRG+ AR++WGNQ SVLVGDFLL QAF M Sbjct: 81 GNGHIRTASAVEFMHTATLLHDDVVDESATRRGRKTARMIWGNQASVLVGDFLLGQAFKM 140 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S L +S A T+AEGE+ QL+ +KN TE+DYL +I +KTA LFSAA E Sbjct: 141 FVDVGSLPVLRIMSNAAATIAEGEVMQLAAAKNTSTTEDDYLAIINAKTAALFSAAAESG 200 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + + AL+SYG NLG+AFQLVDD LDY G+ + +GK++G+DFR GK TLPVIL Sbjct: 201 AALTQRPPEEQSALRSYGKNLGLAFQLVDDALDYAGDSSRLGKSVGDDFREGKITLPVIL 260 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +F+RG+ E+ FW TI DG I+ +L++A MR+++A+ T RA SYG A+D+L Sbjct: 261 SFRRGSPEERQFWNRTIADGDINDGDLEQAVGFMRKHKAIEATFERARSYGAIARDALAI 320 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 PDS K +L +V+ FC+ R + Sbjct: 321 FPDSREKDALEQVIAFCIGRSH 342 >gi|311277840|ref|YP_003940071.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] gi|308747035|gb|ADO46787.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] Length = 323 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 198/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+AG ++ + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GLLAGCSDAQEKGLQDYGRYLGTAFQLIDDLLDYSSDGETLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G+ + + I +G L+ M + +L T RA KA +L Sbjct: 243 AMRHGSAAQSAMIRQAIEEGN-GRHLLEPVLEAMADCGSLEWTRQRAEEEADKAIAALSV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALISLAHIAVQR 321 >gi|293393170|ref|ZP_06637485.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582] gi|291424316|gb|EFE97530.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582] Length = 381 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ S+V +I + Y+I GGKR+RPM+ + A L+Y+ Sbjct: 61 LEQITELTAQDMAAVNATILEQLNSEVTLINQLGYYIISGGGKRIRPMIAVLAARALQYQ 120 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 121 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 180 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 181 MTSLESLRVLALMSEAVNVIAEGEVLQLMNVHDPDITEESYMRVIYSKTARLFEAAAQSS 240 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G + Q L+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 241 AILSGATEAQEQGLQDYGRYLGTAFQLIDDLLDYSADGVTLGKNTGDDLNEGKPTLPLLH 300 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G ++ + I G L+ M + +L T RA KA +L Sbjct: 301 AMHHGNAQQTAMIRGAIEQGN-GRHLLEPVLTAMEQCGSLSYTRQRAEEEADKAIAALHV 359 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + +QR Sbjct: 360 LPQSPFRDALEGLAHLAVQR 379 >gi|27377642|ref|NP_769171.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110] gi|27350787|dbj|BAC47796.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110] Length = 335 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 177/322 (54%), Positives = 226/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y Sbjct: 14 IEELVALVAGDMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMANLAGYT 73 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA ++EF+HTATLLHDDVVD+S +RRGK++AR++WGN+ SVLVGDFLL QAF M Sbjct: 74 GDGHIKLAASVEFMHTATLLHDDVVDESEMRRGKLSARMLWGNEASVLVGDFLLGQAFRM 133 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV Sbjct: 134 MVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVG 193 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA + + A +S GMNLGIAFQLVDDVLDY G+ ++GKN G+DFR GK TLPV+L Sbjct: 194 PVIANRPKAEQTACRSVGMNLGIAFQLVDDVLDYGGKSAKLGKNTGDDFREGKITLPVVL 253 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW + G+I +L A +M ++RAL DT RA YG A D+L Sbjct: 254 AFRRGNDTERAFWIKALERGEIGDTDLDHAIGLMNKHRALEDTLSRAQHYGAMAVDALAL 313 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P S K +L +VV FCL R + Sbjct: 314 FPSSPMKSALEQVVAFCLARSH 335 >gi|253686958|ref|YP_003016148.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753536|gb|ACT11612.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 323 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L+Y Sbjct: 3 LEQITTLTAQDMAAVNNVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALDYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + + + I +G L+ M++ +L T RA KA +L+ Sbjct: 243 AMHNGNAEQSSLIRKAIEEGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAISALQQ 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ ++ +L + +QR Sbjct: 302 LPETPYRIALEGLAHLAVQR 321 >gi|254470016|ref|ZP_05083420.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062] gi|211960327|gb|EEA95523.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062] Length = 337 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 167/322 (51%), Positives = 225/322 (69%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L +L DMEKVN LIL + S+VE+IP++ ++LI SGGKRLRPMLTLA A M Y Sbjct: 16 IQGLVELVSGDMEKVNELILSKAGSNVELIPEIARHLIDSGGKRLRPMLTLAFAQMFGYE 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV+LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M Sbjct: 76 GEGHVILAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKM 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ +S EAL LS + +AEGE+ QL +++ T + YL VI++KTA LF+AA EVS Sbjct: 136 MVDVRSLEALRILSEASAIIAEGEVLQLGAAQDTTTTYDMYLRVIEAKTAALFAAACEVS 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 IA + +R A + +G+ LG AFQLVDD LDY G ++GK++G+DF GK TLPVI Sbjct: 196 PEIADKGDEMRAAARKFGLELGYAFQLVDDALDYGGATVDLGKDVGDDFHEGKITLPVIY 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A +RG+ +K FWK + DG I +L A ++ + AL DT RA YG A D+L Sbjct: 256 AMERGSDEDKAFWKRCLEDGDIKDGDLDHAIKLLNDTGALADTVQRARDYGASAIDALSV 315 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 PD K++L E VDFC+ R++ Sbjct: 316 FPDGPAKQALKEAVDFCIARVS 337 >gi|119775962|ref|YP_928702.1| trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B] gi|119768462|gb|ABM01033.1| Trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B] Length = 333 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 136/322 (42%), Positives = 192/322 (59%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y Sbjct: 13 LNAIRQLADADMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVNYN 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 73 GEGHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S + L+ L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++ Sbjct: 133 MTELGSMKVLQVLADATNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATRLA 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG V +AL YG LG AFQL+DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 193 AVLAGSDEKVEEALADYGKYLGTAFQLIDDLLDYTSDAEELGKNIGDDLAEGKPTLPLIY 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G +RE+ ++ I +++ + AL T RA KA +L Sbjct: 253 AIGHGNEREQGLIRNAIEKAD-GTGAIEEILTALHRCGALDYTRRRAEEEADKAIAALSV 311 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+ +K +L + + R N Sbjct: 312 LPEGDFKTALESLARIAVSRSN 333 >gi|222147711|ref|YP_002548668.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4] gi|221734699|gb|ACM35662.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4] Length = 338 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 183/322 (56%), Positives = 241/322 (74%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT ME+VN LIL + SDV+MIP+V +LI SGGKRLRPMLTLA+A M Y Sbjct: 17 VQPLVDLTRNGMERVNQLILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLASAAMFGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA ++EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GEGHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S EAL+ LS A +AEGE+ QLS++KN++ TE+DY VI++KTA LF+AA EV Sbjct: 137 MVEVGSLEALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYQAVIRAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + R ALKSYGMNLG+AFQLVDD LDY G+V ++GKN G+DFR GK TLPVIL Sbjct: 197 PIVAGTDKAARNALKSYGMNLGLAFQLVDDALDYGGKVADLGKNTGDDFREGKITLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RG + E+ FW+ + G+ NL+KA ++ + L DT RA YG A+D+L Sbjct: 257 AYRRGNEAERGFWREALEGGRHDDANLEKAMGLITKYNGLSDTVARAIHYGDVARDALAP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 +PD WK +LM+V+DFC++R++ Sbjct: 317 VPDGVWKDALMDVIDFCIERVS 338 >gi|144898411|emb|CAM75275.1| Polyprenyl synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 346 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 153/318 (48%), Positives = 221/318 (69%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L L D+EKVN I+ R+ S VE+IP + ++I +GGKRLRP+LTLA+A + + G+ Sbjct: 27 TLVSLVKDDLEKVNRTIIDRMHSPVELIPQLAGHIIAAGGKRLRPVLTLASAKLAGHSGE 86 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 HV LA +EFIHTATLLHDDVVD+S LRRG+ +A ++GN+ SVLVGDFL S++F +++ Sbjct: 87 RHVKLAACVEFIHTATLLHDDVVDESELRRGQASANALFGNKPSVLVGDFLFSRSFELMV 146 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E S L LS + +AEGE+ QL + + D +E+ YL VI+SKTA LF+AA + ++ Sbjct: 147 EDGSLPVLAILSRASSVIAEGEVLQLITANDTDTSEDSYLEVIRSKTAALFAAACRIGAI 206 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +A + AL SYG+NLGIAFQL+DDVLDY + +GK +G+DFR GK TLP+ILAF Sbjct: 207 VADRPKAEEDALDSYGLNLGIAFQLIDDVLDYSAKQAVLGKTVGDDFREGKITLPIILAF 266 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 +RG ++ FW+ T+ + +L++A +M ++ AL DT RA YG+ A+D+L P Sbjct: 267 RRGNDEQREFWRRTVERLEQQDGDLEQAIALMEKHGALADTIARARHYGEVARDALALFP 326 Query: 303 DSSWKKSLMEVVDFCLQR 320 DS K+++++V+DFC+ R Sbjct: 327 DSPVKQAMIDVIDFCIDR 344 >gi|326423749|ref|NP_759657.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] gi|319999111|gb|AAO09184.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] Length = 333 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 134/319 (42%), Positives = 193/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 14 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSARALGYQG 73 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 74 NAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 133 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE+ QL + D TEE Y+ VI SKTA LF AA ++ + Sbjct: 134 TELGSMKILKLMSDAVNIIAEGEVLQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 193 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 194 ILNDAPAEVETALQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLHA 253 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + + I + +E L +M++ +L TE +A KA L+ L Sbjct: 254 MRHTNAENAQMIREAIENAN-GMERLDDILAVMQQAGSLTYTEAKAMEEADKAIAELQVL 312 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + ++R Sbjct: 313 PESEYKQALIALAHMAVKR 331 >gi|317493609|ref|ZP_07952030.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918552|gb|EFV39890.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 323 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ S+V +I + Y+I GGKR+RPM+ + +A L Y Sbjct: 3 LEQITELTAQDMADVNATILQQLNSEVSLINQLGYYIISGGGKRIRPMIAVLSARALNYT 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S LE +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLQSLRVLELMSEATNVIAEGEVLQLMNVNDPNITEENYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAGATHEQEIALQDYGRYLGTAFQLIDDLLDYDADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G+ + I +G L+ M E +L T RA KA +L Sbjct: 243 AMQNGSPERSAMIRKAIEEGN-GRHLLEPVLETMHEVGSLTYTRQRAEEEADKAISALDV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + + R Sbjct: 302 LPESPYKEALIGLANMAVDR 321 >gi|300718598|ref|YP_003743401.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661] gi|299064434|emb|CAX61554.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661] Length = 323 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ S+V +I + Y+I GGKR+RPM+ + A + Y Sbjct: 3 LEQINELTAQDMADVNATILEQLNSEVSLINQLGYYIISGGGKRIRPMIAVLAARAVNYT 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GKQHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A +AL+ YG +G AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 AILAEAVPEQEKALQDYGRFIGTAFQLIDDLLDYSADGKTLGKNVGDDLSEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I G L+ MR+ +L T A KA +L+ Sbjct: 243 AMRNGTPEQSQMIREAIEKGN-GRHLLEPVLETMRQCGSLEWTRQAAEHEADKAISALKA 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S W+ +L + +QR Sbjct: 302 LPESPWRSALEALAHMSVQR 321 >gi|209886074|ref|YP_002289931.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5] gi|209874270|gb|ACI94066.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5] Length = 336 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 178/319 (55%), Positives = 226/319 (70%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L L DM VN IL R S+V MIP+V +LI SGGKRLRPMLTLA A + Y GD Sbjct: 18 LVSLVADDMAGVNTTILARTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAQLAGYVGDG 77 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA A+EF+HTATLLHDDVVD+S LRRGK++AR++WGN+ SVLVGDFLL QAF M++E Sbjct: 78 HIKLAAAVEFMHTATLLHDDVVDESELRRGKLSARMLWGNEASVLVGDFLLGQAFRMMVE 137 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV +I Sbjct: 138 VGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPVI 197 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + + A ++ GMNLGIAFQLVDDVLDY G ++GKN+G+DFR GK TLPV+LAF+ Sbjct: 198 AERPKAEQTACRAVGMNLGIAFQLVDDVLDYGGTAAKLGKNVGDDFREGKITLPVVLAFR 257 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG E++FW T+ G+++ +L A +M ++RAL DT RA YG KA D+L P Sbjct: 258 RGNDVERDFWIRTLERGEVADADLDHAIGLMAKHRALEDTMQRAEHYGAKAVDALALFPS 317 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S K +L +VV FCL R N Sbjct: 318 SPMKSALEQVVAFCLARSN 336 >gi|262275074|ref|ZP_06052885.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] gi|262221637|gb|EEY72951.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] Length = 323 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 131/319 (41%), Positives = 193/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 ++ LT DM KV+ IL ++ SDV +I + Y++ GGKRLRPML + + L Y+G Sbjct: 4 NTIQALTADDMAKVDQKILAQLNSDVALINQLGFYIVSGGGKRLRPMLAVLSGRALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H+ A IEFIHTATLLHDDVVD+S LRRGK A ++GN SVLVGD++ +++F M+ Sbjct: 64 EGHITAAAFIEFIHTATLLHDDVVDESDLRRGKATANAMFGNAASVLVGDYIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E +S L+ +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELRSLRILDLMSKATNVIAEGEVLQLMNCNDPNTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A + A++ YG LG AFQL+DDV+DY + +EMGKN G+D GKPTLP++ A Sbjct: 184 ILADASEEIETAMQDYGRYLGTAFQLIDDVMDYTSQGDEMGKNTGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 GT + + I G ++ L + M +L T RA KA ++L + Sbjct: 244 MANGTPEQAAMIREAIEQGN-GLDKLAQILACMEACGSLEYTRQRAEDEADKAINALAPI 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L + ++R Sbjct: 303 PESEYKEALKALAHIAVRR 321 >gi|188582542|ref|YP_001925987.1| polyprenyl synthetase [Methylobacterium populi BJ001] gi|179346040|gb|ACB81452.1| Polyprenyl synthetase [Methylobacterium populi BJ001] Length = 351 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 167/323 (51%), Positives = 228/323 (70%), Gaps = 1/323 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59 + L L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + Y Sbjct: 29 LTDLVRLVADGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCGYG 88 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 GD V LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF Sbjct: 89 SGDGAVKLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFR 148 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M++E S AL+ LS A +AEGE+ QL+ +KN + +E++YL VI+ KTA LF+AA EV Sbjct: 149 MMVEVGSLRALDILSAAATVIAEGEVMQLTAAKNTETSEDEYLAVIRGKTAELFAAACEV 208 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++ + + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++ Sbjct: 209 GPVLSQRPEAEQAACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIV 268 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 LA +RG+ E+ FW+ T+ + +L++A I+R +RAL +T RA+ YG A+++L Sbjct: 269 LALRRGSDEERAFWRRTLEREDLGEGDLEQALAILRRHRALDETIERAHHYGMMAREALA 328 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 P+ K +L++VVDFC+ R + Sbjct: 329 PFPNGPMKSALLQVVDFCIARAH 351 >gi|148253842|ref|YP_001238427.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1] gi|146406015|gb|ABQ34521.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1] Length = 336 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 178/316 (56%), Positives = 229/316 (72%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + Y GD HV Sbjct: 21 LVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMAHLTGYAGDGHVK 80 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EF+HTATLLHDDVVD+S +RRGK++AR++WGN+ SVLVGDFLL QAF M++E S Sbjct: 81 LAAAVEFMHTATLLHDDVVDESEMRRGKLSARMLWGNEASVLVGDFLLGQAFRMMVEVGS 140 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV ++A Sbjct: 141 LRALDILSAAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPVLADR 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + A +S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+RG+ Sbjct: 201 PKAEQTASRSFGMNLGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVLAFRRGS 260 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW ++ G+IS +L A +M ++RAL DT RA+ YG A D+L P S Sbjct: 261 DSERAFWIKSLERGEISDSDLDHAIGLMNKHRALEDTISRAHHYGAMAVDALALFPASPM 320 Query: 307 KKSLMEVVDFCLQRLN 322 K +L +VV FCL R + Sbjct: 321 KTALEQVVAFCLARSH 336 >gi|242240764|ref|YP_002988945.1| octaprenyl diphosphate synthase [Dickeya dadantii Ech703] gi|242132821|gb|ACS87123.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech703] Length = 323 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L+ +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQITALSAQDMAAVNQIILEQLNSDVALINQLGHYIISGGGKRIRPMIAVLAARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLSSLRVLAVMSDAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILADADTTCENALRDYGRYLGTAFQLIDDLLDYNADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G ++ + I G L M+E +L T RA KA +L+C Sbjct: 243 AMHHGNPEQRRMIRQAIEQGN-GRHLLIPVLAAMQECGSLEYTRQRAEEEADKAIAALQC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S +K +L + +QR Sbjct: 302 LPRSDFKTALESLAHLAVQR 321 >gi|261820112|ref|YP_003258218.1| octaprenyl diphosphate synthase [Pectobacterium wasabiae WPP163] gi|261604125|gb|ACX86611.1| Trans-hexaprenyltranstransferase [Pectobacterium wasabiae WPP163] Length = 323 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y Sbjct: 3 LEQITKLTTQDMAAVNKVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALAYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + + ++ I +G L+ M++ +L T RA KA +L+ Sbjct: 243 AMHHGNAEQSSLIRNAIEEGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAISALQR 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ ++ +L + +QR Sbjct: 302 LPETPYRVALEGLAHLAVQR 321 >gi|307129369|ref|YP_003881385.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937] gi|306526898|gb|ADM96828.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937] Length = 323 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L+ +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + TA L Y+ Sbjct: 3 LEQITALSAQDMAAVNQTILDQLNSDVVLINQLGNYIISGGGKRIRPMIAVLTARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + +S +AEGE+ QL + D+TE+ Y+ VI SKTA LF AA + S Sbjct: 123 MTSLASLRVMSVMSDAVNVIAEGEVLQLMNCNDPDITEDSYMRVIYSKTARLFEAAAQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILSGASSEQELALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + ++ + I +G L+ M+ +L T RA KA +++C Sbjct: 243 AMHHGNEEQRTMIRQAIEEGN-GRHLLEPVLAAMQSCGSLTYTRQRAEEEADKAITAIQC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + +QR Sbjct: 302 LPASDFRTALEGLAHLAVQR 321 >gi|284006654|emb|CBA71916.1| octaprenyl-diphosphate synthase [Arsenophonus nasoniae] Length = 323 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 140/322 (43%), Positives = 198/322 (61%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT KDME VN IL ++ SDV +I + Y+I GGK++RPM+ + L Y Sbjct: 3 LESIINLTAKDMEAVNKAILNQLNSDVHLINQLGHYIISGGGKKIRPMIAILVGRALGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD+S LRRGK A V+GN SVLVGDF+ +++F M Sbjct: 63 GKKHINVAALIEFIHTATLLHDDVVDESTLRRGKKTANAVFGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S L+ +S +AEGE+ QL N D+TE Y+ +I SKTA LF AA S Sbjct: 123 MTELDSMPILKLMSDATNVIAEGEVSQLINCNNPDITESTYMQIIYSKTARLFEAATHAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G + +QAL+ YG LG AFQL+DD+LDY + +GKNIG+D GK TLP++ Sbjct: 183 AIVSGANETQQQALRDYGRYLGTAFQLIDDLLDYDADSTTIGKNIGDDLDEGKLTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A ++GT E +++I G L I M+ +L T RA KA +L Sbjct: 243 AMKKGTAEESALIRNSIEKGN-GRHLLSAILITMKRCGSLEYTRDRAREEADKAIKALDI 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+S+K +L+ + +QRL+ Sbjct: 302 LPDTSYKDALISLACISVQRLS 323 >gi|114564252|ref|YP_751766.1| trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB 400] gi|114335545|gb|ABI72927.1| Trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB 400] Length = 323 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 137/322 (42%), Positives = 202/322 (62%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+ Sbjct: 3 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARTVDYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GEHHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E ++ + L+ L+ LAEGE+ QL + D TE +Y+ VI KTA LF AA +++ Sbjct: 123 MTELENMKVLQVLAHTTNVLAEGEVLQLMNCNDPDTTEANYMRVIYCKTAKLFEAATQLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A V QAL YG LG AFQL DD+LDY +E+GKNIG+D GKPTLP+I Sbjct: 183 GVLANVSPEQEQALADYGKYLGTAFQLTDDLLDYTANADELGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G+ K + I + + + + + E+ ALV T+ +A + QKA D+L Sbjct: 243 AMENGSDTAKKLIRDAIEQSD-GTKAIDEILVALEESGALVYTQEKAQAEAQKAIDALTV 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 PDS +K++L+ + + R + Sbjct: 302 FPDSDYKQALISLAHLSVNRSS 323 >gi|213859721|ref|ZP_03385425.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 318 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 133/317 (41%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y+I GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + ++ I G L+ M +L T RA KA +L+ Sbjct: 243 AMRHGTPEQSAMIRTAIEQGN-GRHLLEPVLEAMTTCGSLEWTRQRAEEEADKAISALQI 301 Query: 301 LPDSSWKKSLMEVVDFC 317 LPD+ W+++L+ + Sbjct: 302 LPDTPWREALIGLAHIA 318 >gi|158422531|ref|YP_001523823.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571] gi|158329420|dbj|BAF86905.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571] Length = 335 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 177/322 (54%), Positives = 230/322 (71%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L DME+VN LIL R SDV MIP+V +LI SGGKRLRPMLT+A A + Y Sbjct: 14 IETLVRLVKGDMERVNALILSRTGSDVAMIPEVANHLISSGGKRLRPMLTIACAALSSYE 73 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGN+ SVLVGDFLL QAF M Sbjct: 74 GDGHIKLAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNEASVLVGDFLLGQAFKM 133 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E L+ LS ACT+AEGE+ QL+ +KN + +E+DYL VI+ KTA LF+AA EV Sbjct: 134 MVEVGILECLDILSTAACTIAEGEVMQLAAAKNTETSEDDYLAVIRGKTAELFAAACEVG 193 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + + A +S+GMNLGIAFQLVDD LDY G ++GKN+G+DFR GK TLPV+L Sbjct: 194 AVLNARPKAEQAACRSFGMNLGIAFQLVDDALDYGGSQAKLGKNVGDDFREGKITLPVLL 253 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FWK + G+ + ENL A ++ ++RAL DT RA YG AKD+L Sbjct: 254 AFRRGDAEERAFWKRCLETGETTDENLAHAVGLLTKHRALADTIERARHYGAMAKDALAL 313 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P S K +L E VDFC+ R + Sbjct: 314 FPASHAKDALAEAVDFCISRAH 335 >gi|149378271|ref|ZP_01895982.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893] gi|149357436|gb|EDM45947.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893] Length = 322 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 145/321 (45%), Positives = 204/321 (63%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + D D +VN LI+KR+ SDV ++ + +Y+I SGGKRLRP+L L ++ L Y Sbjct: 4 QRIYDTVADDFSRVNDLIIKRLSSDVPLVEKIAQYIIESGGKRLRPLLVLLSSRALGYNK 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H+ LA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL ++AF M+ Sbjct: 64 DEHLKLAAVIEFLHTATLLHDDVVDTSDMRRGRSTANARWGNAPSVLVGDFLYARAFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E ++ + ++ LS +AEGE+ QL KN DV+E+ Y+ VI +KTA+LF AA + Sbjct: 124 VELQNLKIMDVLSHATAVIAEGEVLQLMNVKNPDVSEDKYMEVIHNKTAMLFEAASHTGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L+AG S QAL +YG +LG+AFQLVDDVLDYRG+ MGKN+G+D GKPTLP+I A Sbjct: 184 LLAGANGSQEQALSAYGKHLGLAFQLVDDVLDYRGDAEAMGKNVGDDLAEGKPTLPLIYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G+ EK + + G + ++L + I+ + AL T RA + A D L L Sbjct: 244 MANGSDDEKQLIRQAVRKGGL--DDLARILDIVNRSGALEYTMERAKGEAKAALDCLETL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P+S + +L + D + R++ Sbjct: 302 PESDHRNALALLTDVAVARVS 322 >gi|197287216|ref|YP_002153088.1| octaprenyl diphosphate synthase [Proteus mirabilis HI4320] gi|227357090|ref|ZP_03841460.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906] gi|194684703|emb|CAR46670.1| octaprenyl-diphosphate synthase [Proteus mirabilis HI4320] gi|227162782|gb|EEI47745.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906] Length = 323 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + T L+Y+ Sbjct: 3 LESIIKLTSADMAAVNDAILYQLNSDVSLINQLGYYIISGGGKRIRPMIAVLTGRALDYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M Sbjct: 63 GDKHISVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE+ QL + D+TE+DY+ VI SKTA LF AA S Sbjct: 123 MTDLDSMRVLKLMSSATNVIAEGEVLQLMNCNDPDITEDDYMQVIYSKTARLFEAASHAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G +A + YG LG AFQL+DD+LDY + ++GKN G+D GKPTLP++ Sbjct: 183 AILCGATPEQEKAFQDYGRYLGTAFQLIDDLLDYDADNTQLGKNTGDDLDEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + E + I G L M++ +L T +A KA ++L Sbjct: 243 AMHHGNETESQLIRQAIEKGN-GRHLLDTVLKTMKQCGSLEYTRQKAEEEADKAIEALAI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDSS+K +L+ + +QR Sbjct: 302 IPDSSYKDALIGLAHVAVQR 321 >gi|126173210|ref|YP_001049359.1| polyprenyl synthetase [Shewanella baltica OS155] gi|152999569|ref|YP_001365250.1| polyprenyl synthetase [Shewanella baltica OS185] gi|160874188|ref|YP_001553504.1| polyprenyl synthetase [Shewanella baltica OS195] gi|304410433|ref|ZP_07392051.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|307304525|ref|ZP_07584275.1| Polyprenyl synthetase [Shewanella baltica BA175] gi|125996415|gb|ABN60490.1| Trans-hexaprenyltranstransferase [Shewanella baltica OS155] gi|151364187|gb|ABS07187.1| Polyprenyl synthetase [Shewanella baltica OS185] gi|160859710|gb|ABX48244.1| Polyprenyl synthetase [Shewanella baltica OS195] gi|304350917|gb|EFM15317.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|306911927|gb|EFN42351.1| Polyprenyl synthetase [Shewanella baltica BA175] gi|315266420|gb|ADT93273.1| Polyprenyl synthetase [Shewanella baltica OS678] Length = 331 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 139/320 (43%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVSYE 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 71 GEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S + L L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++ Sbjct: 131 MTELDSMKVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLA 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG AL +YG LG AFQL DD+LDY + +E+GKNIG+D GKPTLP+I Sbjct: 191 GVLAGATPEQETALGNYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIY 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT EK+ + I G + + K + AL T+ +A +KA ++L Sbjct: 251 AIAHGTDEEKHLIRQAIEQGD-GTQAIDKIVAALHHCGALNYTQQKAIEESEKAIEALSI 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +K++L+ + + R Sbjct: 310 LPDSDYKQALVALAKISVDR 329 >gi|120553786|ref|YP_958137.1| farnesyltranstransferase [Marinobacter aquaeolei VT8] gi|120323635|gb|ABM17950.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Marinobacter aquaeolei VT8] Length = 322 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 140/321 (43%), Positives = 203/321 (63%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + D D +VN LI+KR+ SDV ++ + +Y+I SGGKRLRP+L L + Y+ Sbjct: 4 QRIYDTVADDFSRVNDLIIKRLASDVPLVEKIAQYIIESGGKRLRPLLVLLASQAAGYQK 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+H+ LA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL ++AF M+ Sbjct: 64 DDHLKLAAVIEFLHTATLLHDDVVDTSDMRRGRSTANAKWGNAPSVLVGDFLYARAFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E +S + LS +AEGE+ QL KN D++E+ Y+ VI +KTA+LF AA + Sbjct: 124 VELQSLPIMNVLSHATAVIAEGEVMQLMNVKNPDLSEDQYMVVIHNKTAMLFEAASHTGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L+A ALK YG +LG+AFQLVDDVLDY+G+ MGKN+G+D GK TLP+I A Sbjct: 184 LLAKASKEQETALKDYGKHLGLAFQLVDDVLDYQGDAETMGKNVGDDLAEGKTTLPLIYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 +G++ E+ + I G + ++L K I++ + A+ T +A Q A+D L CL Sbjct: 244 MAKGSEDERQLIRQAIRKGGL--DDLPKVLDIVKASGAIEYTMTKAKEQAQIARDLLACL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S +++L + + + R++ Sbjct: 302 PGSEHRQALELLTEVAVARVS 322 >gi|74316881|ref|YP_314621.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC 25259] gi|74056376|gb|AAZ96816.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC 25259] Length = 343 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 139/320 (43%), Positives = 197/320 (61%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L+ DM V+ +I +R+ SDV +I V +Y+I SGGKRLRP L L +A YR Sbjct: 24 LESLQSFLADDMRAVDHVIRERLYSDVVLIRQVSEYIINSGGKRLRPALVLLSAGCFGYR 83 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M Sbjct: 84 GQAHHELAAVVEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDFLYSRAFQM 143 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + E + LS T+AEGE+ QL + D+ EE+YL VI+ KTA LF AA + Sbjct: 144 MVGVDNMEVMRILSDATNTIAEGEVLQLLNCHDPDIDEENYLRVIRYKTAKLFEAAGRLG 203 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I G + + AL YGM+LG AFQL+DDVLDY G+ + GKNIG+D GKPTLP++ Sbjct: 204 AVIGGGSEADKDALARYGMHLGTAFQLIDDVLDYSGDFLKTGKNIGDDLAEGKPTLPLLY 263 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G+ + + I G ++ + +++ AL T A Q A ++ Sbjct: 264 AMKHGSAAQAASIRHAIEHGGLT--EFQSVLAAIKDTNALQYTREVAQREVQTANAAISR 321 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS+ K +L+++ F ++R Sbjct: 322 LPDSNSKTALLQLAAFAVER 341 >gi|319899203|ref|YP_004159296.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73] gi|319403167|emb|CBI76726.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73] Length = 338 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 165/322 (51%), Positives = 227/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +LT DME +N LI+ S+VEMIP++ +LI SGGKR+RPM+TLA A M Y+ Sbjct: 17 LHPLLNLTKGDMESINQLIISMAKSNVEMIPEISNHLISSGGKRIRPMITLAAAHMFGYQ 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GDKHIKLATAVEFMHTATLLHDDVVDESELRRGKSTARMIWGNQASVLVGDFLLGQAFKM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL L+ A +AEGE+ QLS +KN++ +YL +I +KTA LFSAA EV Sbjct: 137 MVDVGSLEALSVLANAAAIIAEGEVMQLSAAKNIETNVSNYLKIINAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + R AL YG++LG+AFQL+DDVLDY +GKNIG+DFR GK T+PVIL Sbjct: 197 PIIAGYGHEERSALHQYGLSLGVAFQLIDDVLDYSSSAQYLGKNIGDDFREGKITMPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++ R EK FWK + + + E LK A ++ + L+DT +A YG++A D+L Sbjct: 257 SYTRSNDIEKTFWKQALENNHNNDEALKHAQQLIEKYDGLIDTIEQARIYGKRAIDALSS 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + ++ K +L++++DFC++R+N Sbjct: 317 IKENPAKNALIDIIDFCIERVN 338 >gi|154245320|ref|YP_001416278.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2] gi|154159405|gb|ABS66621.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2] Length = 335 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 176/322 (54%), Positives = 228/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + YR Sbjct: 14 IEALVALVKADMERVNATILARTGSDVAMIPEVANHLISSGGKRLRPMLTLACASLSGYR 73 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGN+ SVLVGDFLL QAF M Sbjct: 74 GDGHVKLAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNEASVLVGDFLLGQAFKM 133 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S L+ L+ AC +AEGE+ QL+ +KN +E+DYL VI+ KTA LF+AA EV Sbjct: 134 MVEVGSMTCLDILATAACVIAEGEVMQLAAAKNTATSEDDYLAVIRGKTAELFAAACEVG 193 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + + A +SYGMNLGIAFQLVDD LDY G ++GKN+G+DFR GK TLPV+L Sbjct: 194 AVLGQRPKAEQAACRSYGMNLGIAFQLVDDALDYGGSQAKLGKNVGDDFREGKITLPVLL 253 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW+ + G+ + +L +A +M +RA+ DT RA YG AKD+L Sbjct: 254 AFRRGDASERAFWQRCLEKGEGNDADLDQAIGLMTRHRAIADTVERARHYGAIAKDALAL 313 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P+ K +LME VDFCL R + Sbjct: 314 FPNGQAKDALMEAVDFCLSRAH 335 >gi|59710884|ref|YP_203660.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114] gi|59478985|gb|AAW84772.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114] Length = 323 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 192/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM VN IL ++ SDV +I + Y++ GGKRLRP+L + +A L Y G Sbjct: 4 KAIQALTADDMAIVNETILAQLNSDVALINQLGFYIVSGGGKRLRPVLAILSAKALGYEG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 KDHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAEFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S + L +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TSLGSIKILSLMSEAVNVIAEGEVLQLMNCNDPNTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPQEIETALQNYGKYLGTAFQLIDDVMDYTSDGKDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G + + + I +G ++ L+ M+E +L T+ +A KA L L Sbjct: 244 MMHGNEEQNAMIREAIENGN-GLDKLEPILACMKEVGSLEYTKQKADEEADKAIAELAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L + ++R Sbjct: 303 PESDYKEALKALAHLAVKR 321 >gi|209693963|ref|YP_002261891.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238] gi|208007914|emb|CAQ78045.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238] Length = 323 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 189/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM VN IL ++ SDV +I + Y++ GGKRLRP+L + +A L Y G Sbjct: 4 KAIQALTADDMAIVNETILAQLNSDVALINQLGFYIVSGGGKRLRPVLAILSAKALGYEG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 KDHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAEFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S + L +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TSLGSIKILSLMSESVNVIAEGEVLQLMNCNDPNTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNNASQEIETALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G + + I G ++ L M+E +L T+ +A KA L + Sbjct: 244 MNNGNAEQAAMIRHAIEQGN-GLDKLDPILACMKEVGSLEYTKQKADEEADKAIAELSII 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L + ++R Sbjct: 303 PESEYKEALKALAHLAVKR 321 >gi|90020654|ref|YP_526481.1| phage tail region protein [Saccharophagus degradans 2-40] gi|89950254|gb|ABD80269.1| Trans-hexaprenyltranstransferase [Saccharophagus degradans 2-40] Length = 320 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 136/320 (42%), Positives = 210/320 (65%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + +D +VN LI+ ++ SDV ++ ++ Y++ +GGKRLRP+L L TA L Y Sbjct: 1 MQSFYKVVQEDFAEVNTLIVNQLHSDVGLVENIGHYIVDAGGKRLRPLLVLLTARALGYN 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ L+ IEFIHTATLLHDDVVD SALRRG+ A WGN SVLVGDFL S+AF M Sbjct: 61 GNQHLSLSAIIEFIHTATLLHDDVVDVSALRRGRPTANANWGNAPSVLVGDFLYSRAFQM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E ++ L+ ++EGE++QL ++N +VTE++Y+ VI KTA LF AA E + Sbjct: 121 MVEIGEMGIMKELANTTNVISEGEVQQLVNARNPEVTEQNYMTVIHKKTAALFEAACETA 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + +A++SYG +LG+AFQLVDDVLDY+G+ E+GKN+G+D GKPTLP+I Sbjct: 181 AILAGADAATCKAVRSYGYHLGVAFQLVDDVLDYQGDAEELGKNVGDDLAEGKPTLPLIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 G+ E K I + S++ L++ I++ L T+ A + +AK ++ Sbjct: 241 TINNGSAEEAELVKQAIINS--SLDKLQQIVDIVQRRGGLEYTQQCAQDHINRAKQAIAL 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ ++ ++ ++ DF ++R Sbjct: 299 LPETEFRSAMEDLADFAIKR 318 >gi|320157514|ref|YP_004189893.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio vulnificus MO6-24/O] gi|319932826|gb|ADV87690.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O] Length = 323 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 134/319 (42%), Positives = 193/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y+I GGKRLRP+L + +A L Y+G Sbjct: 4 KTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 NAHTTAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE+ QL + D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSDAVNIIAEGEVLQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V AL++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPAEVETALQNYGKYLGTAFQLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + + I + +E L +M++ +L TE +A KA L+ L Sbjct: 244 MRHTNAENAQMIREAIENAN-GMERLDDILAVMQQAGSLTYTEAKAMEEADKAIAELQVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ + ++R Sbjct: 303 PESEYKQALIALAHMAVKR 321 >gi|197333941|ref|YP_002155036.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11] gi|197315431|gb|ACH64878.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11] Length = 323 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 131/319 (41%), Positives = 190/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM VN IL ++ SDV +I + Y++ GGKRLRP+L + +A L Y G Sbjct: 4 KAIQALTADDMAIVNETILAQLNSDVALINQLGFYIVSGGGKRLRPVLAILSAKALGYEG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 KDHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAEFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S + L +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TSLGSIKILSLMSEAVNVIAEGEVLQLMNCNDPNTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + AL++YG LG AFQL+DDV+DY + +MGKN+G+D GKPTLP++ A Sbjct: 184 ILNDAPQEIETALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G K + + I +G ++ L M E +L T+ +A KA L L Sbjct: 244 MMHGNKEQNAMIREAIENGN-GLDKLDPILACMEEVGSLEYTKQKADEEADKAIAELATL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L + ++R Sbjct: 303 PESDYKEALKALAHLAVKR 321 >gi|260773626|ref|ZP_05882542.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio metschnikovii CIP 69.14] gi|260612765|gb|EEX37968.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio metschnikovii CIP 69.14] Length = 323 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 130/320 (40%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KV+ IL ++ SDV +I + Y++ GGKRLRP+L + +A L Y+G Sbjct: 4 KAIQALTADDMAKVDKTILAQLNSDVSLINQLGFYIVSGGGKRLRPLLAILSAKALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H + A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 EGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANATFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + L+ +S +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TELGSMKILKLMSHSVNIIAEGEVLQLMNCNDPETTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V +A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 MLCDASPEVERAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + + + I +E L M++ +L T +A KA L L Sbjct: 244 MRNSQGEQSAMIREAIEKAN-GMEKLTAILATMQQAGSLEYTTAKAQQEADKAIAELAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 P+S +K++L+ + ++R Sbjct: 303 PESDYKQALIALAHMAVKRT 322 >gi|296104900|ref|YP_003615046.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059359|gb|ADF64097.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 323 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GKAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + + L+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGCTAAQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G+ + + I G L+ M +L T RA KA +L+ Sbjct: 243 AMHNGSADQAKMIREAIEQGN-GRHLLEPVLETMAICGSLEWTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDS W+ +L+ + +QR Sbjct: 302 IPDSPWRDALIGLAHIAVQR 321 >gi|240139858|ref|YP_002964335.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1] gi|240009832|gb|ACS41058.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1] Length = 340 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 170/323 (52%), Positives = 229/323 (70%), Gaps = 1/323 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59 + L L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + +Y Sbjct: 18 LTDLVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCDYG 77 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 GD V LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF Sbjct: 78 SGDGAVKLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFR 137 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M++E S AL+ LS A +AEGE+ QL+ +KN++ +E++YL VI+ KTA LF+AA EV Sbjct: 138 MMVEVGSLRALDILSAAATVIAEGEVMQLTAAKNIETSEDEYLAVIRGKTAELFAAACEV 197 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++AG S + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++ Sbjct: 198 GPVLAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGSSAALGKNVGDDFREGKITLPIV 257 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 LA +RG+ E+ FW+ T+ + +L++A I+ +RAL DT RA+ YG +A+ +L Sbjct: 258 LALRRGSDEERAFWRRTLEREDRAEGDLQQALAILSRHRALDDTIERAHHYGDQARAALE 317 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 P K +L++VVDFC+ R + Sbjct: 318 PFPPGPMKAALLQVVDFCIARAH 340 >gi|319404558|emb|CBI78164.1| octaprenyl-diphosphate synthase [Bartonella rochalimae ATCC BAA-1498] Length = 337 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 169/322 (52%), Positives = 225/322 (69%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L LT +DME VN L + S+V MIP++ YLI SGGKR+RPM+TLATA M Y+ Sbjct: 16 LHPLFSLTKEDMECVNQLTISMAKSNVAMIPEISNYLISSGGKRIRPMITLATAHMFGYQ 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA A+EF+HTATLLHDDVVD+SALRRGK AR++WGNQ S+LVGDFLL QAF M Sbjct: 76 GDKHIKLATAVEFMHTATLLHDDVVDESALRRGKSTARIIWGNQASILVGDFLLGQAFKM 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +AL LS A +AEGE+ QLS +KN++ DYL +I +KTA LFSAA EV Sbjct: 136 MVDVGSLDALSVLSNAAAIIAEGEVMQLSAAKNIETNVSDYLKIINAKTAALFSAAAEVG 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG R AL YG++LG+AFQL+DDVLDY +GKNIG+DFR GK T+PVIL Sbjct: 196 PIIAGYGPEERSALHQYGLSLGLAFQLIDDVLDYSSSAQYLGKNIGDDFREGKITMPVIL 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++ RG EK FWK + + E LK A ++ + L DT +A YG++A D+L Sbjct: 256 SYTRGNDIEKIFWKQALENNHNDDEALKHAQQLIEKYDGLTDTIEQARIYGKRAIDALSS 315 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + D+ K +L++++DFC++R+N Sbjct: 316 IKDNPAKNALIDIIDFCIERVN 337 >gi|292490245|ref|YP_003525684.1| trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4] gi|291578840|gb|ADE13297.1| Trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4] Length = 322 Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats. Identities = 137/321 (42%), Positives = 201/321 (62%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ DL DM+ VN LI KR+ SDV +I + Y+I SGGKRLRP++ L +A +Y+ Sbjct: 3 IQSTYDLIADDMQAVNGLIQKRLHSDVVLINQLGHYIINSGGKRLRPVVVLLSARAFDYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD S LRRG+ A +WG++ SVLVGDFL S+AF M Sbjct: 63 GSCHIDIATIIEFIHTATLLHDDVVDSSELRRGQKTANSIWGSEASVLVGDFLYSRAFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S +E L+ T+AEGE+ QL + D TEE YL VI+SKTA LF AA ++ Sbjct: 123 MVDVNSMRVMEILARTTNTIAEGEVMQLLNCHDPDTTEERYLDVIRSKTAKLFEAATQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ + +A+ +YGM+LG AFQL DDVLDY +++GKNIG+D GKPTLP+I Sbjct: 183 AVLSCRPAAEEEAMAAYGMHLGTAFQLTDDVLDYSASSDDLGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G ++ I G +NL + + + A+ T A +KA +++ Sbjct: 243 AMRNGIPSHAEVIRNAIEGG--GRDNLAEVIEAIESSGAIAYTAKTARREAEKAIQAIKK 300 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 +P S ++++L+ + F + R Sbjct: 301 IPASPYQEALLNLAKFAVYRT 321 >gi|163867858|ref|YP_001609062.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476] gi|161017509|emb|CAK01067.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476] Length = 338 Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats. Identities = 168/322 (52%), Positives = 227/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DLT KDME+VN IL S++EMIP++ +LI SGGKRLRPM+TLA+A M Y+ Sbjct: 17 LQSLFDLTQKDMERVNQFILSMAKSEIEMIPEISNHLISSGGKRLRPMITLASAHMFGYQ 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H+ LA A+EF+HTATLLHDDV+D+S LRRGK AR++WGNQ S+LVGDFLL QAF M Sbjct: 77 SDGHIKLATAVEFMHTATLLHDDVIDESDLRRGKSTARMIWGNQASILVGDFLLGQAFKM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL L+ A +AEGE+ QLS +KN+ + DYL +I +KTA LFSAA EV Sbjct: 137 MVDVGSIEALSVLANAAAIIAEGEVMQLSAAKNIKTSSSDYLKIINAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + R AL+ YG +LG+AFQL+DD LDY G +GKNIG+DFR GK T+PVIL Sbjct: 197 PIVAGYGHKERSALREYGTSLGLAFQLIDDALDYSGSAQNLGKNIGDDFREGKITMPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RG EK FWK + DG S E A +M + ++ DT +A YG++A D+L Sbjct: 257 AYERGNMDEKAFWKQALEDGNNSNEAFAHAQHLMEKYNSITDTIEQARVYGKRAIDALIP 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + ++ +L+E V+FC+ R+N Sbjct: 317 MNENPAYNALVETVEFCIARIN 338 >gi|163852524|ref|YP_001640567.1| polyprenyl synthetase [Methylobacterium extorquens PA1] gi|163664129|gb|ABY31496.1| Polyprenyl synthetase [Methylobacterium extorquens PA1] Length = 340 Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats. Identities = 170/323 (52%), Positives = 229/323 (70%), Gaps = 1/323 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59 + L L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + +Y Sbjct: 18 LTDLVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCDYG 77 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 GD V LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF Sbjct: 78 SGDGAVKLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFR 137 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M++E S AL+ LS A +AEGE+ QL+ +KN++ +E++YL VI+ KTA LF+AA EV Sbjct: 138 MMVEVGSLRALDILSAAATVIAEGEVMQLTAAKNIETSEDEYLAVIRGKTAELFAAACEV 197 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++AG S + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++ Sbjct: 198 GPVLAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIV 257 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 LA +RG+ E+ FW+ T+ + +L++A I+ +RAL DT RA+ YG +A+ +L Sbjct: 258 LALRRGSDEERAFWRRTLEREDRAEGDLQEALAILSRHRALDDTIERAHHYGDQARAALE 317 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 P K +L++VVDFC+ R + Sbjct: 318 PFPQGPMKAALLQVVDFCIARAH 340 >gi|269137746|ref|YP_003294446.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202] gi|267983406|gb|ACY83235.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202] gi|304557803|gb|ADM40467.1| Octaprenyl-diphosphate synthase [Edwardsiella tarda FL6-60] Length = 323 Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats. Identities = 136/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQITELTAQDMADVNARILHQLNSDVALINQLGYYIISGGGKRIRPMIAVLAARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDRHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE++QL + D++EE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRILALMSEATNVIAEGEVQQLMNVNDPDISEENYMQVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + QAL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAGADTAQEQALQDYGRYLGTAFQLIDDLLDYDADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G+ + I G L+ M++ +L T RA KA +L Sbjct: 243 AMHHGSAERSAMIRQAIEQGN-GRHLLEPVLETMQQAGSLDYTRSRAEEEADKAIAALAP 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS K++L+ + + + R Sbjct: 302 LPDSPHKQALIGLANLAVNR 321 >gi|50119637|ref|YP_048804.1| octaprenyl diphosphate synthase [Pectobacterium atrosepticum SCRI1043] gi|49610163|emb|CAG73603.1| octaprenyl-diphosphate synthase [Pectobacterium atrosepticum SCRI1043] Length = 323 Score = 318 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y Sbjct: 3 LEQITTLTTQDMAAVNKVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALAYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A ++G + + + I +G L+ M++ +L T RA KA ++L+ Sbjct: 243 AMRQGNAEQSSLIRQAIEEGN-GRHLLEPILAAMQQCGSLDYTRQRAEEEADKAINALQL 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + ++ +L + +QR Sbjct: 302 LPKTPYRMALEGLAHLAVQR 321 >gi|170723659|ref|YP_001751347.1| polyprenyl synthetase [Pseudomonas putida W619] gi|169761662|gb|ACA74978.1| Polyprenyl synthetase [Pseudomonas putida W619] Length = 322 Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 129/321 (40%), Positives = 198/321 (61%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QTFYRAVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ +EE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTSEEVYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AG + R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I Sbjct: 184 ALAGATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G + E+L++ + + + AL T A Y ++A + L L Sbjct: 244 MREGTPEQAALVRKAIQKGGL--EDLEQIRVAVEASGALDYTAQLARDYVKRAIECLEVL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PASQYRDALVELSEFAVARTH 322 >gi|146339069|ref|YP_001204117.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278] gi|146191875|emb|CAL75880.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278] Length = 336 Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 178/316 (56%), Positives = 230/316 (72%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DME+VN IL R SDV MIP+V +LI SGGKRLRPMLTLA A + EY GD HV Sbjct: 21 LVTADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMAHLTEYAGDGHVK 80 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EF+HTATLLHDDVVD+S +RRGK++AR++WGN+ SVLVGDFLL QAF M++E S Sbjct: 81 LAAAVEFMHTATLLHDDVVDESEMRRGKLSARMLWGNEASVLVGDFLLGQAFRMMVEVGS 140 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV ++A Sbjct: 141 LRALDILSAAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPVLADR 200 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + + A +S+GMNLGIAFQLVDDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+RG+ Sbjct: 201 PKAEQTASRSFGMNLGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVLAFRRGS 260 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW ++ G+I+ +L A +M ++RAL DT RA+ YG A D+L P S Sbjct: 261 DSERAFWIKSLERGEINDSDLDHAIGLMNKHRALEDTISRAHHYGAMAVDALALFPASPM 320 Query: 307 KKSLMEVVDFCLQRLN 322 K +L +VV FCL R + Sbjct: 321 KTALEQVVAFCLARSH 336 >gi|238793005|ref|ZP_04636634.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909] gi|238727605|gb|EEQ19130.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909] Length = 323 Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y Sbjct: 3 LEKIIELTAPDMANVNTTILNQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALHYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTGLESLRVLTLMSEATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAASQSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AVLADATETQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L+ M++ +L T RA KA +L+ Sbjct: 243 AMHNGTVEQAAMIRQAIEQGN-GRHLLEPVLAAMQQCGSLDYTRRRAEEEADKAIAALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S ++ +L + +QR Sbjct: 302 LPESEYRLALEGLAHIAVQR 321 >gi|254562277|ref|YP_003069372.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4] gi|254269555|emb|CAX25521.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4] Length = 340 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 170/323 (52%), Positives = 229/323 (70%), Gaps = 1/323 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59 + L L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + +Y Sbjct: 18 LTDLVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCDYG 77 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 GD V LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF Sbjct: 78 SGDGAVKLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFR 137 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M++E S AL+ LS A +AEGE+ QL+ +KN++ +E++YL VI+ KTA LF+AA EV Sbjct: 138 MMVEVGSLRALDILSAAATVIAEGEVMQLTAAKNIETSEDEYLAVIRGKTAELFAAACEV 197 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++AG S + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++ Sbjct: 198 GPVLAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIV 257 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 LA +RG+ E+ FW+ T+ + +L++A I+ +RAL DT RA+ YG +A+ +L Sbjct: 258 LALRRGSDEERAFWRRTLEREDRAEGDLQQALAILSRHRALDDTIERAHHYGDQARAALE 317 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 P K +L++VVDFC+ R + Sbjct: 318 PFPQGPMKAALLQVVDFCIARAH 340 >gi|317046711|ref|YP_004114359.1| polyprenyl synthetase [Pantoea sp. At-9b] gi|316948328|gb|ADU67803.1| Polyprenyl synthetase [Pantoea sp. At-9b] Length = 323 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + +A L Y+ Sbjct: 3 LEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISGGGKRIRPMIAVLSARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GSQHITNAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + L +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSMGSLKILALMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + +AL+ YG +G AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAEATPAQEKALQDYGRYIGTAFQLIDDLLDYSADGETLGKNTGDDLSEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I +G L+ M++ +L T RA KA +L+ Sbjct: 243 AMHHGTPEQAQMIRRAIEEGN-GRHLLEPVLEAMQQCGSLAWTRQRAEEEADKAIAALKI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ W+ +L + +QR Sbjct: 302 LPETPWRSALEALAHMSVQR 321 >gi|212709993|ref|ZP_03318121.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM 30120] gi|212687402|gb|EEB46930.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM 30120] Length = 323 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y++ GGKR+RPM+ + L Y Sbjct: 3 LESIVELTAEDMSAVNEAILSQLNSDVALINQLGYYIVSGGGKRIRPMIAILAGRSLGYS 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 H+ +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M Sbjct: 63 EHKHIQVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA S Sbjct: 123 MTDLDSMRVLKLMSEATNVIAEGEVLQLMNCNDPDITEESYMQVIYSKTARLFEAASHAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A +AL+ YG +G AFQLVDD+LDY + ++GKN G+D GKPTLP++ Sbjct: 183 AILANATPEQEKALQDYGRYIGTAFQLVDDLLDYDADNTQLGKNTGDDLDEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G + E + I G L+ M+ +L T RA QKA D+L Sbjct: 243 AMQHGNEEESALIRQAIEQGN-GRHLLETVLSTMKRCGSLEYTYQRAQEEAQKAIDALNA 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L DS +K++L+ + +QR Sbjct: 302 LEDSVYKEALIGLAHVAIQR 321 >gi|218531359|ref|YP_002422175.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4] gi|218523662|gb|ACK84247.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4] Length = 340 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 170/323 (52%), Positives = 228/323 (70%), Gaps = 1/323 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY- 59 + L L ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + +Y Sbjct: 18 LTDLVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCDYG 77 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 GD V LA A+EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF Sbjct: 78 SGDGAVKLAAAVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFR 137 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M++E S AL+ LS A +AEGE+ QL+ +KN++ +E +YL VI+ KTA LF+AA EV Sbjct: 138 MMVEVGSLRALDILSAAATVIAEGEVMQLTAAKNIETSENEYLAVIRGKTAELFAAACEV 197 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 ++AG S + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++ Sbjct: 198 GPVLAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIV 257 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 LA +RG+ E+ FW+ T+ + +L++A I+ +RAL DT RA+ YG +A+ +L Sbjct: 258 LALRRGSDEERAFWRRTLEREDRAEGDLQQALAILSRHRALDDTIERAHHYGDQARAALE 317 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 P K +L++VVDFC+ R + Sbjct: 318 PFPQGPMKAALLQVVDFCIARAH 340 >gi|126666697|ref|ZP_01737674.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] gi|126628742|gb|EAZ99362.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] Length = 322 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 143/321 (44%), Positives = 200/321 (62%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + D D +VN LI++R+ SDV M+ + +Y+I SGGKRLRP+L L + Y Sbjct: 4 QRIYDTVADDFSRVNELIIQRLSSDVPMVEKIAQYIIESGGKRLRPLLVLLASRATGYNE 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DNH+ LA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL ++AF M+ Sbjct: 64 DNHLKLAAVIEFLHTATLLHDDVVDTSDMRRGRSTANAKWGNAPSVLVGDFLYARAFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E +S ++ LS +AEGE+ QL KN D+TE Y+ VI +KTA+LF A+ + Sbjct: 124 VELESLPIMKVLSHATAVIAEGEVMQLMNVKNPDLTENQYMQVIHNKTAMLFEASSHSGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L+AG ++ +ALK+YG +LG+AFQLVDDVLDYRG+ MGKN+G+D GK TLP+I A Sbjct: 184 LLAGANHAQEEALKNYGKHLGLAFQLVDDVLDYRGDAETMGKNVGDDLAEGKTTLPLIYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 EK + I G + ++L+ I+ AL +A + Q+AKD L+ L Sbjct: 244 IANSNDDEKKLIRRAIRKGGL--DDLQPVLAIINTTGALNYAMDKAKNQAQQAKDCLQSL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S +L + D + R++ Sbjct: 302 PASEHLDALHLLTDIAVARIS 322 >gi|148977829|ref|ZP_01814384.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3] gi|145962898|gb|EDK28169.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3] Length = 323 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 136/321 (42%), Positives = 194/321 (60%), Gaps = 1/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L L +A L Y+G Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 EAHITSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S LE +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TTLGSLRILELMSEAVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILTESSPEIETAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G+ + + + I +E L +M+E +L T +AY KA L L Sbjct: 244 MHNGSPEQASMIREAIEKAN-GMERLDDIMAVMKETGSLEYTTNKAYEEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 PDS +K++L + ++R + Sbjct: 303 PDSEYKQALTTLAHLAVKRTS 323 >gi|319408199|emb|CBI81852.1| octaprenyl-diphosphate synthase [Bartonella schoenbuchensis R1] Length = 338 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 170/321 (52%), Positives = 229/321 (71%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + L +LT +ME+VN LI+ + +DVEMIP++ YLI SGGKRLRPM+TLA A M Y+G Sbjct: 18 QTLINLTKDNMERVNQLIISMVQADVEMIPEICNYLISSGGKRLRPMITLAAADMFGYQG 77 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H+ LA AIEF+HTATLLHDDVVD+S LRRGK AR++WGN+ SVLVGDFLL QAF M+ Sbjct: 78 DGHIKLATAIEFMHTATLLHDDVVDESNLRRGKSTARMIWGNKASVLVGDFLLGQAFKMI 137 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++ S EAL L+ A +AEGE+ QL+ ++N++ T DYL +I +KTA LFSAA EV Sbjct: 138 VDVGSMEALTILANAAAIIAEGEVMQLAAAQNIETTASDYLKIINAKTAALFSAAAEVGP 197 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IAG + R AL+ YG +LG+AFQLVDD LDY G +GKNIG+DFR GK T+PVIL+ Sbjct: 198 IIAGYGHEERLALREYGTSLGLAFQLVDDALDYSGNAEHLGKNIGDDFREGKITMPVILS 257 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + RG EK FWK + + + E+L A +M + +L DT +A YG++A D+L + Sbjct: 258 YTRGNATEKAFWKQALENNNNNDESLVHAQHLMEKYDSLTDTIEQARIYGKQAIDALSPI 317 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 ++ K + +E+VDFC+ R+N Sbjct: 318 KENPQKNAFIEIVDFCIARIN 338 >gi|119897305|ref|YP_932518.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72] gi|119669718|emb|CAL93631.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72] Length = 341 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 198/320 (61%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DM+ V+ LI K + SDV +I V +Y+I SGGKRLRP L L +A + YR Sbjct: 22 VQQLFAPIAADMQAVDALIRKALYSDVVLIRQVAEYIINSGGKRLRPALVLFSAGAVGYR 81 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA +EFIHT+TLLHDDVVD+S LRRG A ++GN SVLVGDFL ++AF M Sbjct: 82 GTQHHRLAAVVEFIHTSTLLHDDVVDESELRRGNKTANALFGNAASVLVGDFLYTRAFQM 141 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S ++ L+ +AEGE+ QL N DV EDYL VI+ KTA LF AA + Sbjct: 142 MVEVDSMRVMQILADATNIIAEGEVLQLLNCHNADVEVEDYLRVIRYKTAKLFEAASRLG 201 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G ++ +++ ++GM+LG AFQL+DDVLDY + + GK++G+D GKPTLP+I Sbjct: 202 AVLGGADPALEESMAAFGMHLGTAFQLIDDVLDYSADEADTGKHLGDDLAEGKPTLPLIH 261 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q G+ + + I +G ++ +++ AL T A +A +L+ Sbjct: 262 VMQHGSAEQAALVRGAIENG--GRDDFAAVLAAIQQTGALEVTRRHAREEADRAIAALQG 319 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S++K+SL+++ DF ++R Sbjct: 320 LPPSNFKESLLQLSDFAVER 339 >gi|237809123|ref|YP_002893563.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187] gi|237501384|gb|ACQ93977.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187] Length = 323 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 138/319 (43%), Positives = 198/319 (62%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 +++ L DM+ VN LI +R+ SDV ++ + Y+I GGKR+RP+L + +A + Y+G Sbjct: 4 QVIRTLADDDMQAVNQLIYQRLQSDVALVNQLAYYIISGGGKRIRPLLAVLSARAIGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H+ LA IEFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL ++AF M+ Sbjct: 64 DAHISLATIIEFIHTATLLHDDVVDESVLRRGRDTANQLFGNAASVLVGDFLHTRAFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E + ++ LS +AEGE+ QL + TE++YL VI KTA LF AA ++ Sbjct: 124 VELGNMRIMQLLSEATNLIAEGEVMQLMNCNDPSTTEDNYLQVIYCKTAKLFEAATHCAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A + QAL+ YG LG AFQL+DDV+DY MGKN+G+D GKPTLP+I A Sbjct: 184 ILANQPAHIEQALRDYGKYLGTAFQLIDDVMDYSSSSETMGKNVGDDLSEGKPTLPLIYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 +GT +K + I + +E L + I+++ AL T RA +KA D+L L Sbjct: 244 MVQGTPEQKKRIEQAITERD-GMEYLDEILDILQQTHALEYTVTRAEQEARKAIDALSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS +K +L + + + R Sbjct: 303 PDSDYKTALQALAESAVHR 321 >gi|85712490|ref|ZP_01043538.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] gi|85693624|gb|EAQ31574.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] Length = 323 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 136/321 (42%), Positives = 194/321 (60%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + DL KDM+ VN LI +++ SDV +I + Y++ SGGKRLRP+L + + L Y Sbjct: 3 LKSINDLAQKDMQGVNALIGEQLSSDVALINQLGMYIVNSGGKRLRPLLAVLSCRALGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ LA IEFIHTATLLHDDVVD+S LRRG+ A V+GN+ SVLVGDFL ++AF M Sbjct: 63 GRAHLSLATIIEFIHTATLLHDDVVDESELRRGRKTANAVFGNEASVLVGDFLYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S L L+ +AEGE+ QL + D TE Y VI KTA LF AA +++ Sbjct: 123 MVQLDSMTILSILADATNVIAEGEVLQLMNCNDPDTTEARYFDVIYGKTAKLFEAATQLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ ++V + L YG LG AFQLVDD++DY + MGKN G+D GKPTLP++ Sbjct: 183 GVLTEQDSTVTEQLADYGRYLGTAFQLVDDLMDYTSDSQTMGKNAGDDLAEGKPTLPLLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + + + I G E+L+ M AL T +A Q+A++SL Sbjct: 243 AMWHGDEAARKLIREAIEQGD-GREHLETVLAAMHATGALEYTRQKALEVAQQARESLAV 301 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP+S +K++L+ + + R+ Sbjct: 302 LPESDYKQALIALTHLAVDRV 322 >gi|291615993|ref|YP_003518735.1| IspB [Pantoea ananatis LMG 20103] gi|291151023|gb|ADD75607.1| IspB [Pantoea ananatis LMG 20103] gi|327396245|dbj|BAK13667.1| octaprenyl-diphosphate synthase IspB [Pantoea ananatis AJ13355] Length = 323 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + +A + Y+ Sbjct: 3 LEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISGGGKRIRPMIAVLSARAMGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDLHVTNAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSMGSLRILALMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAASQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAEATPAQEKALQDYGRYLGTAFQLIDDLLDYSADGETLGKNTGDDLSEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G+ + + I G L M + +L T RA KA +L+ Sbjct: 243 AMNHGSPEQAKMIRDAIEQGN-GRHLLAPVLEAMNQCGSLEWTRQRAEQEADKAIAALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ W+ +L + +QR Sbjct: 302 LPETPWRSALEALAHMSVQR 321 >gi|261345175|ref|ZP_05972819.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541] gi|282566867|gb|EFB72402.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541] Length = 323 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN +IL ++ SDV +I + Y+I GGKR+RPM+ + L Y Sbjct: 3 LESIIELTNEDMSAVNKVILSQLNSDVALINQLGYYIISGGGKRIRPMIAILAGRSLGYS 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M Sbjct: 63 GHKHTQVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA S Sbjct: 123 MTDLDSMRVLKLMSEATNVIAEGEVLQLMNCNDPNITEENYMQVIYSKTARLFEAASHAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + +AL+ YG +G AFQLVDD+LDY + ++GKN G+D GKPTLP++ Sbjct: 183 AILANATPAQEKALQDYGRYIGTAFQLVDDLLDYDADNTQLGKNTGDDLDEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + E + I G L M+ +L T RA QKA D+L Sbjct: 243 AMNHGNEEESALIRQAIEQGN-GRHLLDTVLATMKRCGSLDYTYQRAQEEAQKAIDALDI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L DS++K++L+ + +QR Sbjct: 302 LEDSAYKQALIGLAHIAIQR 321 >gi|84394037|ref|ZP_00992774.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01] gi|84375323|gb|EAP92233.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01] Length = 323 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 136/319 (42%), Positives = 195/319 (61%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L L +A L Y+G Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 EAHITSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S + LE +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TTLGSLKILELMSEAVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +++ + A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILSESSPEIETAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G+ + + + I +E L +M+E +L T +AY KA L L Sbjct: 244 MHNGSPEQTSMIREAIEKAN-GMERLDDIMAVMKETGSLEYTTNKAYEEADKAIAELSVL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS +K++L + ++R Sbjct: 303 PDSEYKQALTTLAHLAVKR 321 >gi|217974480|ref|YP_002359231.1| polyprenyl synthetase [Shewanella baltica OS223] gi|217499615|gb|ACK47808.1| Polyprenyl synthetase [Shewanella baltica OS223] Length = 331 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 139/320 (43%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVSYE 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 71 GEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S + L L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++ Sbjct: 131 MTELDSMKVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLA 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG AL +YG LG AFQL DD+LDY + +E+GKNIG+D GKPTLP+I Sbjct: 191 GVLAGATLEQETALGNYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIY 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT EK+ + I G + + K + AL T+ +A +KA ++L Sbjct: 251 AIAHGTDEEKHLIRQAIEQGD-GTQAIDKIVAALHHCGALNYTQQKAIEESEKAIEALSI 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +K++L+ + + R Sbjct: 310 LPDSDYKQALVALAKISVDR 329 >gi|260596184|ref|YP_003208755.1| octaprenyl-diphosphate synthase [Cronobacter turicensis z3032] gi|260215361|emb|CBA27367.1| Octaprenyl-diphosphate synthase [Cronobacter turicensis z3032] Length = 323 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A L Y Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARALGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GKAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSIKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGASEAQERALQDYGRYLGTAFQLIDDLLDYSADGERLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L M +L T RA KA +L Sbjct: 243 AMHNGTPAQAQMIREAIEQGN-GRHLLDPVLETMAACGSLEWTRTRAEEEADKAIAALEI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L S W+ +L+ + +QR Sbjct: 302 LSPSPWRDALIALAHMSVQR 321 >gi|206578772|ref|YP_002236401.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342] gi|288933385|ref|YP_003437444.1| dimethylallyltranstransferase [Klebsiella variicola At-22] gi|290511564|ref|ZP_06550933.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55] gi|206567830|gb|ACI09606.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342] gi|288888114|gb|ADC56432.1| Dimethylallyltranstransferase [Klebsiella variicola At-22] gi|289776557|gb|EFD84556.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55] Length = 323 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GSAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQCA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GMLADCSAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L M +L T+ RA KA +L+ Sbjct: 243 AMHHGTPDQAAMIRGAIEQGN-GRHLLDAVLETMATCGSLEWTQKRAEEEADKAIAALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|322831197|ref|YP_004211224.1| Polyprenyl synthetase [Rahnella sp. Y9602] gi|321166398|gb|ADW72097.1| Polyprenyl synthetase [Rahnella sp. Y9602] Length = 323 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + DLT DM VN IL+++ S+V +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQIIDLTQDDMAAVNASILEQLNSEVSLINQLGYYIISGGGKRIRPMIAVLAAKALSYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHIKVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + +S L ++ +AEGE++QL + D+TE Y+ VI SKTA LF AA + S Sbjct: 123 MTDLESLPVLALMAKAVNVIAEGEVQQLINCNDPDITEASYMQVIYSKTARLFEAASQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG N AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AMLAGGNNEQITALQDYGRYLGTAFQLIDDLLDYDADGETLGKNTGDDLDEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G + + I +G L+ M + +L T RA KA +L+ Sbjct: 243 AMQHGDAEQSAMIRKAIEEGN-GRHLLEPVLAAMHQWGSLAYTRQRAEEEADKAIQALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S ++ +L + ++R Sbjct: 302 LPESEYRSALEGLAHMSVKR 321 >gi|313497049|gb|ADR58415.1| IspB [Pseudomonas putida BIRD-1] Length = 322 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 130/321 (40%), Positives = 197/321 (61%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QTFYRAVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +A + R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I Sbjct: 184 ALAQATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G + E+L++ + + E+ AL T A Y ++A L L Sbjct: 244 MREGTTEQAALVRQAIQKGGL--EDLEQIRVAVEESGALKYTAELARDYVKRAIACLEVL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PASEYRDALVELSEFAVARTH 322 >gi|104780055|ref|YP_606553.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48] gi|95109042|emb|CAK13738.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48] Length = 322 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 132/321 (41%), Positives = 197/321 (61%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QTFYRAVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTTEEIYMDVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AG + R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I A Sbjct: 184 ALAGASDEQREALRTFGDHLGVAFQLVDDLLDYKGDSETLGKNVGDDLAEGKPTLPLIYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G + E+L++ I + + AL T A Y +A L L Sbjct: 244 MREGTAEQAALVRQAIQKGGL--EDLEQIRIAVEASGALAYTAQMARDYVARAIACLEVL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PASEYRDALVELSEFAVARTH 322 >gi|330831008|ref|YP_004393960.1| trans-hexaprenyltranstransferase [Aeromonas veronii B565] gi|328806144|gb|AEB51343.1| Trans-hexaprenyltranstransferase [Aeromonas veronii B565] Length = 323 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 139/319 (43%), Positives = 196/319 (61%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + L DM VN LIL R+ SDV +I + Y++ +GGKR+RPMLT+ A L Y G Sbjct: 4 QTIRALCAADMTAVNELILARLQSDVSLINQLGFYIVSAGGKRMRPMLTVMAARALGYEG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 ++H+ LA IEFIHT+TLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M+ Sbjct: 64 EDHLKLAAIIEFIHTSTLLHDDVVDESDLRRGRETANAMFGNAASVLVGDYLYSRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E + +E LS T+AEGE+ QL + D TEE Y+ VI KTA LF AA +++ Sbjct: 124 AELSNLRVMEILSDATNTIAEGEVLQLMNCNDPDTTEESYMTVIYCKTAKLFEAATRLAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V QA+ YG LG AFQ++DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 VLTHQPEPVEQAMTDYGKYLGTAFQIIDDVMDYCSQSEEMGKNVGDDLAEGKPTLPLLRA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT E+ + I + + +E+L++ I+ AL + RA KA +L L Sbjct: 244 MEVGTPEERQLVRDAI-EHRNGMEHLEQILGILDRTGALEYSRMRAREEADKAIAALAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS K +L + +QR Sbjct: 303 PDSPHKHALETLAHMAVQR 321 >gi|188532487|ref|YP_001906284.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99] gi|188027529|emb|CAO95376.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99] Length = 324 Score = 316 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 134/322 (41%), Positives = 196/322 (60%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A + +Y Sbjct: 3 LEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAINDY 62 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF Sbjct: 63 AGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 122 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + Sbjct: 123 MMTSLGSLKVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQS 182 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+++AG S QAL+ YG +G AFQL+DD+LDY + + +GKN+G+D GKPTLP++ Sbjct: 183 SAILAGATASQEQALQDYGRYIGTAFQLIDDLLDYSADGDTLGKNVGDDLSEGKPTLPLL 242 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + GT + + ++ I +G L+ M + +L T A KA +L+ Sbjct: 243 HAMRNGTPEQASLIRTAIEEGN-GRHLLETVLETMNQCGSLEWTRNAAEQEADKAIAALK 301 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 LP+S W+ +L + +QR Sbjct: 302 VLPESPWRSALEALAHMSVQRT 323 >gi|114766799|ref|ZP_01445733.1| decaprenyl diphosphate synthase [Pelagibaca bermudensis HTCC2601] gi|114540993|gb|EAU44051.1| decaprenyl diphosphate synthase [Roseovarius sp. HTCC2601] Length = 331 Score = 316 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 152/319 (47%), Positives = 208/319 (65%), Gaps = 1/319 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L L DM+ VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA+A + Y G Sbjct: 12 LATLLSGDMDGVNALIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLASARLCGYEGP 71 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L ++AF +++ Sbjct: 72 FHVHLAATVEFIHTATLLHDDVVDESKQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMV 131 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E + L LS A T+AEGE+ QL+ +++L E+ YL V++ KTA LFSAA EV + Sbjct: 132 EPGNLRVLNILSNAAATIAEGEVLQLTAAQDLRTNEDIYLQVVRGKTAALFSAATEVGGV 191 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 IAGV+ QAL YG LGIAFQ+VDD+LDY+G+ + GKN+G+DFR K TLPVI A Sbjct: 192 IAGVEEEQVQALFDYGDALGIAFQIVDDLLDYQGDSSATGKNVGDDFRERKLTLPVIKAI 251 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 E+ FWK TI G +L+ A ++ ++ AL T A ++ KAK S+ LP Sbjct: 252 AAADDEERAFWKRTIEKGDQQDGDLEHALALLNKHGALDATRADAQAWTDKAKASMEKLP 311 Query: 303 DSSWKKSLMEVVDFCLQRL 321 S + L+E+ DF + R+ Sbjct: 312 QSELRDLLVELADFVVSRV 330 >gi|26987423|ref|NP_742848.1| polyprenyl synthetase [Pseudomonas putida KT2440] gi|24982082|gb|AAN66312.1|AE016259_10 octylprenyl diphosphate synthase [Pseudomonas putida KT2440] Length = 322 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 130/321 (40%), Positives = 197/321 (61%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QTFYRAVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +A + R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I Sbjct: 184 ALAQATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G + E+L++ + + E+ AL T A Y ++A L L Sbjct: 244 MREGTAEQAALVRQAIQKGGL--EDLEQIRVAVEESGALKYTAELARDYVKRAIACLEVL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PASEYRDALVELSEFAVARTH 322 >gi|156935711|ref|YP_001439627.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894] gi|156533965|gb|ABU78791.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894] Length = 323 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A L Y Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARALGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GKAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + LE +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GILAGASEAQERALQDYGRYLGTAFQLIDDLLDYSADGERLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L M +L T RA KA +L Sbjct: 243 AMHNGTPAQAQMIREAIEQGN-GRHLLDPVLETMAACGSLEWTRARAEEEADKAIAALEI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L S W+ +L+ + +QR Sbjct: 302 LSPSPWRDALIALAHMSVQR 321 >gi|167031734|ref|YP_001666965.1| polyprenyl synthetase [Pseudomonas putida GB-1] gi|166858222|gb|ABY96629.1| Polyprenyl synthetase [Pseudomonas putida GB-1] Length = 322 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 130/321 (40%), Positives = 197/321 (61%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QTFYRAVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +A + R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I Sbjct: 184 ALAEATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G + E+L++ + + E+ AL T A Y ++A L L Sbjct: 244 MREGTAEQAALVRQAIQKGGL--EDLEQIRVAVEESGALKYTAELARDYVKRAIACLEVL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PASEYRDALVELSEFAVARTH 322 >gi|299134682|ref|ZP_07027874.1| Polyprenyl synthetase [Afipia sp. 1NLS2] gi|298590492|gb|EFI50695.1| Polyprenyl synthetase [Afipia sp. 1NLS2] Length = 336 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 177/319 (55%), Positives = 227/319 (71%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L L DM VN IL R S+V MIP+V +LI SGGKRLRPMLTLA A + Y GD Sbjct: 18 LVALVADDMAGVNTTILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAQLAGYTGDG 77 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA A+EF+HTATLLHDDVVD+S LRRGK++AR++WGN+ SVLVGDFLL QAF M++E Sbjct: 78 HIKLAAAVEFMHTATLLHDDVVDESELRRGKLSARMLWGNEASVLVGDFLLGQAFRMMVE 137 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S AL+ LS A T+AEGE+ QL+ +KN TE++YL VI+ KTA LF+AA EV +I Sbjct: 138 VGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAASEVGPVI 197 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + + A +S+GMNLGIAFQL+DDVLDY G+ ++GKN+G+DFR GK TLPV+LAF+ Sbjct: 198 ANRPKAEQTASRSFGMNLGIAFQLIDDVLDYGGKAAKLGKNVGDDFREGKITLPVVLAFR 257 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RG E++FW T+ G+++ +L A +M ++RAL DT RA YG A D+L P Sbjct: 258 RGNDVERDFWIRTLERGEVADADLDHAIGLMTKHRALDDTMQRAQHYGAMAVDALALFPS 317 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S K +L +VV FCL R N Sbjct: 318 SPMKSALEQVVAFCLARSN 336 >gi|254512243|ref|ZP_05124310.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium KLH11] gi|221535954|gb|EEE38942.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium KLH11] Length = 332 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 152/322 (47%), Positives = 210/322 (65%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +L +ME VN LI R+ SD IP+V +L+ +GGKRLRPMLTLA A + +Y Sbjct: 11 ERLAELLAAEMEAVNGLIRTRMASDHAPRIPEVTAHLVEAGGKRLRPMLTLAAAQLFDYS 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F + Sbjct: 71 GDHHIRLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET S L+ L+ + T+AEGE+ Q++ + +LD +E YL V++ KTA LFSAA EV Sbjct: 131 MVETGSLRVLDILANASATIAEGEVLQMTAATDLDTSEAIYLQVVRGKTAALFSAATEVG 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + +AL YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI Sbjct: 191 GVIAGASDEQVRALYDYGDALGIAFQIADDLLDYQGDSAATGKNVGDDFRERKLTLPVIK 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T E FW+ TI G+ +L A +MR+ L T A + KAK +L+ Sbjct: 251 AVAQATAEEHAFWERTIGRGRQEEGDLDHALSLMRKYGTLEATRADALGWATKAKTALQL 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD + L + D+ + RLN Sbjct: 311 LPDHEIRNLLGALADYVVSRLN 332 >gi|329997657|ref|ZP_08302894.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3] gi|328538933|gb|EGF64988.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3] Length = 323 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GSAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQCA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+A +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GLLADCTAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L M +L T+ RA KA +L+ Sbjct: 243 AMHHGTPDQSAMIRGAIEQGN-GRHLLDAVLETMATCGSLEWTQKRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|51594815|ref|YP_069006.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP 32953] gi|153949434|ref|YP_001402567.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP 31758] gi|170025973|ref|YP_001722478.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis YPIII] gi|186893824|ref|YP_001870936.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis PB1/+] gi|51588097|emb|CAH19703.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP 32953] gi|152960929|gb|ABS48390.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP 31758] gi|169752507|gb|ACA70025.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII] gi|186696850|gb|ACC87479.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+] Length = 323 Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 187/320 (58%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEKIIELTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M Sbjct: 63 GSKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL N D+TEE Y+ VI SKTA LF AA + + Sbjct: 123 MTGLQSMRVLTLMSEATNVIAEGEVLQLMNCNNPDITEESYMQVIYSKTARLFEAAAQSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ AL++YG LG AFQL+DD+LDY E + +GKN G+D GKPTLP++ Sbjct: 183 AILSDASEEQELALQNYGRYLGTAFQLIDDLLDYSAEGSTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L+ M +LV T RA KA +L Sbjct: 243 AMHNGTPEQAAMIRQAIEQGN-GRHLLEPVLAAMEHCGSLVYTRQRAEEEADKAIAALHA 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S ++ +L + + R Sbjct: 302 LPESDYRLALEGLAHISVHR 321 >gi|148545964|ref|YP_001266066.1| polyprenyl synthetase [Pseudomonas putida F1] gi|148510022|gb|ABQ76882.1| Polyprenyl synthetase [Pseudomonas putida F1] Length = 322 Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 130/321 (40%), Positives = 197/321 (61%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QTFYRAVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +A + R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I Sbjct: 184 ALAQATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G + E+L++ + + E+ AL T A Y ++A L L Sbjct: 244 MREGTAEQAALVRQAIQKGGL--EDLEQIRVAVEESGALHYTAELARDYVKRAIACLEVL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PASEYRDALVELSEFAVARTH 322 >gi|22124585|ref|NP_668008.1| octaprenyl diphosphate synthase [Yersinia pestis KIM 10] gi|45440424|ref|NP_991963.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Microtus str. 91001] gi|108806061|ref|YP_649977.1| octaprenyl diphosphate synthase [Yersinia pestis Antiqua] gi|108813417|ref|YP_649184.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516] gi|145600809|ref|YP_001164885.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides F] gi|153997290|ref|ZP_02022390.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125] gi|162421069|ref|YP_001608269.1| octaprenyl diphosphate synthase [Yersinia pestis Angola] gi|165928166|ref|ZP_02223998.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165937469|ref|ZP_02226032.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. IP275] gi|166011293|ref|ZP_02232191.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166214028|ref|ZP_02240063.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401227|ref|ZP_02306727.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420704|ref|ZP_02312457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423704|ref|ZP_02315457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470490|ref|ZP_02335194.1| octaprenyl-diphosphate synthase [Yersinia pestis FV-1] gi|218930527|ref|YP_002348402.1| octaprenyl diphosphate synthase [Yersinia pestis CO92] gi|229839166|ref|ZP_04459325.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896655|ref|ZP_04511822.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A] gi|229899730|ref|ZP_04514871.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229903892|ref|ZP_04519005.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516] gi|270489119|ref|ZP_06206193.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294505357|ref|YP_003569419.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003] gi|21957387|gb|AAM84259.1|AE013669_9 octaprenyl diphosphate synthase [Yersinia pestis KIM 10] gi|45435281|gb|AAS60840.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Microtus str. 91001] gi|108777065|gb|ABG19584.1| octaprenyl-diphosphate synthase [Yersinia pestis Nepal516] gi|108777974|gb|ABG12032.1| octaprenyl-diphosphate synthase [Yersinia pestis Antiqua] gi|115349138|emb|CAL22101.1| octaprenyl-diphosphate synthase [Yersinia pestis CO92] gi|145212505|gb|ABP41912.1| octaprenyl-diphosphate synthase [Yersinia pestis Pestoides F] gi|149288927|gb|EDM39007.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125] gi|162353884|gb|ABX87832.1| octaprenyl-diphosphate synthase [Yersinia pestis Angola] gi|165914574|gb|EDR33188.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. IP275] gi|165919853|gb|EDR37154.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989677|gb|EDR41978.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166204823|gb|EDR49303.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|166961510|gb|EDR57531.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049252|gb|EDR60660.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057874|gb|EDR67620.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679662|gb|EEO75765.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516] gi|229687222|gb|EEO79297.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229695532|gb|EEO85579.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700433|gb|EEO88465.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A] gi|262363422|gb|ACY60143.1| octaprenyl-diphosphate synthase [Yersinia pestis D106004] gi|262367203|gb|ACY63760.1| octaprenyl-diphosphate synthase [Yersinia pestis D182038] gi|270337623|gb|EFA48400.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294355816|gb|ADE66157.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003] gi|320013717|gb|ADV97288.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 323 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 188/320 (58%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+++ A L Y+ Sbjct: 3 LEKIIELTAPDMAAVNTTILDQLNSDVVLINQLGHYIISGGGKRIRPMISVLVARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M Sbjct: 63 GSKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL N D+TEE Y+ VI SKTA LF AA + + Sbjct: 123 MTGLQSMRVLTLMSEATNVIAEGEVLQLMNCNNPDITEESYMQVIYSKTARLFEAAAQSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ AL++YG LG AFQL+DD+LDY E + +GKN G+D GKPTLP++ Sbjct: 183 AILSDASEEQELALQNYGRYLGTAFQLIDDLLDYSAEGSTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L+ M +LV T RA KA +L Sbjct: 243 AMHNGTPEQAAMIRQAIEQGN-GRHLLEPVLAAMEHCGSLVYTRQRAEEEADKAIAALHA 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S ++ +L + + R Sbjct: 302 LPESDYRLALEGLAHISVHR 321 >gi|332678210|gb|AEE87339.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida Fx1] Length = 325 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 130/325 (40%), Positives = 201/325 (61%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYS 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQ---NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + + + +++YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A T++++ K I G+ + + + +++++ A+ + A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEYT---IDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|77166478|ref|YP_345003.1| trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707] gi|76884792|gb|ABA59473.1| Trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707] Length = 345 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 135/321 (42%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ DL DM+ V+ LI +R+ SDV +I + Y+I SGGKRLRPM+ L +A Y+ Sbjct: 26 IQSAYDLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQ 85 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD S LRRG+ A +WG++ SVLVGDFL S+AF M Sbjct: 86 GSYHIDIAAIIEFIHTATLLHDDVVDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEM 145 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S +E L+ T+AEGE+ QL D TEE YL +I+SKTA LF AA ++ Sbjct: 146 MVGVDSMRVMEILARTTNTIAEGEVMQLLNCHEPDTTEECYLEIIRSKTAKLFEAATQLG 205 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ ++ + + +YGM+LG AFQL DDVLDY ++GKNIG+D GKPTLP+I Sbjct: 206 AVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGKNIGDDLAEGKPTLPLIY 265 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A +G+ ++ I G ENL + + + A+ T A KA +++ Sbjct: 266 AMSKGSTSHVKVIRNAIESG--GRENLAEVIEAIESSGAIAYTAEAARREADKAMQAVKN 323 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 +P S ++++L+ + F R Sbjct: 324 IPASPYQEALLNLAKFAAYRT 344 >gi|238918407|ref|YP_002931921.1| hypothetical protein NT01EI_0448 [Edwardsiella ictaluri 93-146] gi|238867975|gb|ACR67686.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 323 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQITELTAQDMADVNAKILHQLNSDVALINQLGYYIISGGGKRIRPMIAILAARTLGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDHHLTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE++QL + D++EE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRILALMSEATNVIAEGEVQQLMNVNDPDISEENYMQVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + QAL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAGADPAQEQALQDYGRYLGTAFQLIDDLLDYDADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G+ + I G L+ M++ +L T RA KA +L Sbjct: 243 AMHHGSAERSAMIRQAIEQGN-GRHLLELVLETMQQAGSLDYTRSRAEEEADKAIAALTL 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS K++L+ + + + R Sbjct: 302 LPDSPHKQALIGLANLAVNR 321 >gi|310766238|gb|ADP11188.1| Octaprenyl diphosphate synthase [Erwinia sp. Ejp617] Length = 324 Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 134/322 (41%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A + +Y Sbjct: 3 LEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAINDY 62 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF Sbjct: 63 AGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 122 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + Sbjct: 123 MMTSLGSLKVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQS 182 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+++AG + QAL+ YG +G AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 SAILAGASEAEEQALQDYGRYIGTAFQLIDDLLDYSADGETLGKNVGDDLSEGKPTLPLL 242 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + GT + + +S I +G L+ M + +L T A KA +L Sbjct: 243 HAMRNGTPEQASMIRSAIEEGN-GRHLLESVLETMNQCGSLEWTRNAAEKEADKAIAALG 301 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 LP S W+ +L + +QR Sbjct: 302 VLPKSPWRTALEALAHMSVQRT 323 >gi|241668473|ref|ZP_04756051.1| polyprenyl synthetase family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877007|ref|ZP_05249717.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843028|gb|EET21442.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 325 Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 131/325 (40%), Positives = 203/325 (62%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K +++L +D+E N I+ + S+V +I + Y+I SGGKRLRP+L + + L Y Sbjct: 4 LKDIQNLIKQDIENNNQFIINSLSSEVVLINQISHYIINSGGKRLRPLLVMLFSRALNYT 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GNDHLACAAIIEFIHTATLLHDDVVDDSHLRRGKETANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N++++EEDY +VI KTA LF AA E++ Sbjct: 124 MVGLDNMKIMQILADATNKISEGEVLQLLNARNIELSEEDYTNVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQNSVRQAL---KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + S + K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQSYSKLQNSIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A + E+ K I G+ ++ + I++ + A+ + A Y KAK+S Sbjct: 244 TIYALANTSSAEQKKIKDAIEKGQY---DISEIINIVKSSGAVEYSYQVACQYADKAKES 300 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LP+S +K++++ + D ++R + Sbjct: 301 ISFLPESEYKQAMILLCDLAVKRKS 325 >gi|152972111|ref|YP_001337257.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896694|ref|YP_002921439.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae NTUH-K2044] gi|262042746|ref|ZP_06015900.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150956960|gb|ABR78990.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549021|dbj|BAH65372.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039971|gb|EEW41088.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 323 Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV++I + Y++ GGKR+RPM+ + A + Y+ Sbjct: 3 LEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GSAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S + LE +S +AEGE+ QL + D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQCA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+A +AL+ YG LG AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 GLLADCTAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLGKNVGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L M +L T+ RA KA +L+ Sbjct: 243 AMHHGTPDQSAMIRGAIEQGN-GRHLLDAVLETMATCGSLEWTQKRAEEEADKAIAALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ W+++L+ + +QR Sbjct: 302 LPDTPWREALIGLAHIAVQR 321 >gi|271499159|ref|YP_003332184.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586] gi|270342714|gb|ACZ75479.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586] Length = 323 Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 129/320 (40%), Positives = 188/320 (58%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L+ +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQITALSAQDMAAVNQTILDQLNSDVVLINQLGNYIIGGGGKRIRPMIAVLAARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + +S +AEGE+ QL + D+TE+ Y+ VI SKTA LF AA + S Sbjct: 123 MTSLASLRVMSVMSDAVNVIAEGEVLQLMNCNDPDITEDSYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILSDASSEQELALQEYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G ++ + I G L+ M+ +L T RA KA +++C Sbjct: 243 AMHHGNDEQRTMIRQAIEQGN-GRHLLEPVLAAMQSCGSLTYTRQRAEEEADKAITAIQC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + +QR Sbjct: 302 LPASDFRTALEGLAHLAVQR 321 >gi|49475216|ref|YP_033257.1| octaprenyl-diphosphate synthase [Bartonella henselae str. Houston-1] gi|49238021|emb|CAF27227.1| Octaprenyl-diphosphate synthase [Bartonella henselae str. Houston-1] Length = 356 Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 167/322 (51%), Positives = 221/322 (68%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L +LT DME VN I SDVE+IP++ +LI SGGKRLRPMLTLA+A M Y+ Sbjct: 35 LQSLVNLTKDDMEHVNQCIFSMAKSDVEIIPEISNHLISSGGKRLRPMLTLASARMFGYQ 94 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H+ LA A+EF+HTATLLHDDV+D+S LRRGK AR++WGNQ S+LVGDFLL QAF M Sbjct: 95 NDGHIKLATAVEFMHTATLLHDDVIDESNLRRGKSTARMIWGNQASILVGDFLLGQAFKM 154 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL L+ A +AEGE+ QLS +KN++ + DYL +I +KTA LFSAA EV Sbjct: 155 MVDVGSIEALSVLANAAAIIAEGEVMQLSATKNIETSISDYLKIINAKTAALFSAAAEVG 214 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + R AL+ YG LG+AFQL+DD LDY G +GKNIG+DFR GK T+PVIL Sbjct: 215 PIIAGYGHEERLALREYGTFLGLAFQLIDDALDYGGTAKYLGKNIGDDFREGKITMPVIL 274 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+ R EK FWK + +G + E A ++ + +L DT +A SYG+ A +L Sbjct: 275 AYARSNAVEKTFWKQALENGNSNDETFAHAQHLIEKYDSLTDTIEQARSYGKNATHALAA 334 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + +S +L+E VDFC+ R+N Sbjct: 335 ISESPIHNALIETVDFCIARVN 356 >gi|254464181|ref|ZP_05077592.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I] gi|206685089|gb|EDZ45571.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I] Length = 328 Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 151/322 (46%), Positives = 210/322 (65%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +ML +++E VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A M Y Sbjct: 7 EMLAATLSQELEAVNVLIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYE 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F + Sbjct: 67 GDHHVKLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET+S L+ L+ + T+AEGE+ Q++ + NL E YL V++ KTA LFSAA EV Sbjct: 127 MVETESLRVLDILANASATIAEGEVLQMTAASNLKTDEGIYLQVVRGKTAALFSAATEVG 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + +AL YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI Sbjct: 187 GVIAGAPETQVKALFEYGDALGIAFQIADDLLDYQGDSKATGKNVGDDFRERKLTLPVIK 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T E+ FW TI GK +L++A +M + L T A + KA+ +L Sbjct: 247 AVAQATDEERAFWTRTIEKGKQQDGDLEQALALMAKYGTLEATRQDALGWAAKARAALEV 306 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD + L ++ D+ + RLN Sbjct: 307 LPDHEIRTMLSDLADYVVARLN 328 >gi|218708400|ref|YP_002416021.1| octaprenyl-diphosphate synthase [Vibrio splendidus LGP32] gi|218321419|emb|CAV17369.1| Octaprenyl-diphosphate synthase [Vibrio splendidus LGP32] Length = 323 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 135/319 (42%), Positives = 193/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L L +A L Y+G Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 EAHITSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S LE +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TTLGSLRILELMSESVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILTESSPEIETAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G+ + + + I +E L +M+E +L T +AY KA L L Sbjct: 244 MHNGSPDQASMIREAIEKAN-GMERLDDIMSVMKETGSLEYTTNKAYEEADKAIAELSIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L + ++R Sbjct: 303 PESEYKQALTTLAHLAVKR 321 >gi|300721522|ref|YP_003710797.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC 19061] gi|297628014|emb|CBJ88563.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC 19061] Length = 323 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 128/322 (39%), Positives = 188/322 (58%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + L+ Sbjct: 3 LESIIKLTADDMAAVNETILNQLNSDVALINQLGYYIISGGGKRIRPMIAVLAGKALQCG 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + H+ +A IEFIHTATLLHDDVVD+S +RRGK A ++GN SVLVGDF+ +++F M Sbjct: 63 DEKHIKVAALIEFIHTATLLHDDVVDESDMRRGKETANAIYGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE+ QL + D++E+DY+ VI SKTA LF A + Sbjct: 123 MTDLDSMRVLKLMSDATNVIAEGEVMQLMNCNDPDISEDDYMRVIYSKTARLFEVAAHSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A AL+ YG LG AFQL+DD+LDY + N +GKN G+D GKPTLP++ Sbjct: 183 AILANATPEQEIALRDYGCYLGTAFQLIDDLLDYDSDNNTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L M++ +L T RA KA +L+ Sbjct: 243 AMNHGTPEQSALIRDAIEKGN-GRHLLDTVLATMKQCGSLKYTRQRAEEEADKAISALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L DS +K +L+ + +QR++ Sbjct: 302 LDDSPYKAALVGLAHIAVQRVS 323 >gi|117617957|ref|YP_855472.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559364|gb|ABK36312.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 323 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 138/319 (43%), Positives = 197/319 (61%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + L DM VN LIL R+ SDV +I + Y++ +GGKR+RPMLT+ A L Y G Sbjct: 4 QTIRALCAADMTAVNELILARLQSDVSLINQLGFYIVSAGGKRMRPMLTVMAARALGYEG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 ++H+ LA IEFIHT+TLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M+ Sbjct: 64 EDHLKLAAIIEFIHTSTLLHDDVVDESDLRRGRETANALFGNAASVLVGDYLYSRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E + +E LS T+AEGE+ QL + D TEE Y+ VI KTA LF AA +++ Sbjct: 124 SELSNLRVMEILSDATNTIAEGEVLQLMNCNDPDTTEESYMTVIYCKTAKLFEAATRLAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V QA+ YG LG AFQ++DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 184 VLTHQPEPVEQAMTDYGKYLGTAFQIIDDVMDYCSQSDEMGKNVGDDLAEGKPTLPLLRA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ E+ + I + + +E+L + I+ AL + RA KA +L L Sbjct: 244 MEVGSPEERQLVRDAI-EHRNGMEHLDRILAILDRTGALEYSRMRAREEADKAIAALAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS K++L + +QR Sbjct: 303 PDSRHKQALETLAHMAVQR 321 >gi|86147820|ref|ZP_01066126.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222] gi|85834347|gb|EAQ52499.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222] Length = 323 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 135/319 (42%), Positives = 194/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM KVN I ++ SDV +I + Y++ GGKRLRP+L L +A L Y+G Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H+ A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ +++F M+ Sbjct: 64 EAHITSAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 S LE +S +AEGE++QL N D TEE Y+ VI SKTA LF AA ++ + Sbjct: 124 TTLGSLRILELMSESVNVIAEGEVQQLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ + A+++YG LG AFQL+DDV+DY + EMGKN+G+D GKPTLP++ A Sbjct: 184 ILTESTPEIETAMQNYGKYLGTAFQLIDDVMDYTADGKEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + + I +E L +M+E +L T +AY KA L L Sbjct: 244 MRNGSPDQASMIREAIEKAN-GMERLDDIMSVMKETGSLEYTTNKAYEEADKAIAELSIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L + ++R Sbjct: 303 PESEYKQALTTLAHLAVKR 321 >gi|259907026|ref|YP_002647382.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96] gi|224962648|emb|CAX54103.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96] gi|283476821|emb|CAY72659.1| octaprenyl diphosphate synthase [Erwinia pyrifoliae DSM 12163] Length = 324 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 134/322 (41%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A + +Y Sbjct: 3 LEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAINDY 62 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF Sbjct: 63 AGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 122 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + Sbjct: 123 MMTSLGSLKVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQS 182 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+++AG + QAL+ YG +G AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 SAILAGASEAEEQALQDYGRYIGTAFQLIDDLLDYSADGETLGKNVGDDLSEGKPTLPLL 242 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + GT + + +S I +G L+ M + +L T A KA +L Sbjct: 243 HAMRNGTPEQASMIRSAIEEGN-GRHLLESVLETMNQCGSLGWTRNAAEKEADKAIAALE 301 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 LP S W+ +L + +QR Sbjct: 302 VLPKSPWRTALEALAHMSVQRT 323 >gi|156502468|ref|YP_001428533.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|290953802|ref|ZP_06558423.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312813|ref|ZP_06803545.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica URFT1] gi|156253071|gb|ABU61577.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 325 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 132/325 (40%), Positives = 198/325 (60%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALVKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQNSVRQAL---KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 LI+ + + K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GLISIDKQDYTKYQGRIKNYGVYLGNAFQITDDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A T++++ K I G+ + + +++++ A+ + A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|153874225|ref|ZP_02002523.1| Polyprenyl synthetase [Beggiatoa sp. PS] gi|152069311|gb|EDN67477.1| Polyprenyl synthetase [Beggiatoa sp. PS] Length = 337 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 140/330 (42%), Positives = 195/330 (59%), Gaps = 12/330 (3%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 + L +DM VN LI KR+ S+V ++ + Y++ SGGKRLRPML L +A Y+G Sbjct: 6 AINTLINQDMRAVNVLIQKRLYSEVALVNQIGDYIVNSGGKRLRPMLLLLSARAFAYQGT 65 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +H+ LA +EFIHTATLLHDDVVD S LRRG+ A +WGN+ SVLVGDFL S+AF M++ Sbjct: 66 HHIDLAAIVEFIHTATLLHDDVVDASLLRRGQETANNIWGNEASVLVGDFLYSRAFQMMV 125 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + + ++ LS +AEGE+ QL D TE DYL VI +KTA LF AA ++ ++ Sbjct: 126 DINNMRVMKILSEATNVMAEGEVLQLLNCYEPDTTEMDYLRVICAKTAKLFEAAAQLGAV 185 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 I+ + +A+ YGM+LGIAFQL+DD LDY + +GKNIG+D GKPTLP+I A Sbjct: 186 ISEQPSEYEKAMAMYGMHLGIAFQLIDDALDYNATMENLGKNIGDDLTEGKPTLPLIYAL 245 Query: 243 QRGTKREKNFWKSTI------------NDGKISVENLKKAFIIMRENRALVDTEYRAYSY 290 + T ++ + I ND E +KK +I+ A+ T A Sbjct: 246 KHATPSQQKILREGISQDGQLHDAIKQNDKTSVDELIKKVIVIVESTGAIRYTMQVAQKE 305 Query: 291 GQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 KA +L LP S + ++L + DF + R Sbjct: 306 ADKAIIALTELPQSPYTEALRSLADFSVNR 335 >gi|329297304|ref|ZP_08254640.1| polyprenyl synthetase [Plautia stali symbiont] Length = 323 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGK +RPM+ + +A L Y+ Sbjct: 3 LEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISGGGKHIRPMIAVLSARALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GSLHVTNAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSMGSLKILALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAASQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAEATPAQEKALQDYGRYLGTAFQLIDDLLDYSADGETLGKNTGDDLSEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I +G L+ M++ +L T RA KA +L+ Sbjct: 243 AMHNGTPEQAQMIRKAIEEGN-GRHLLEPVLAAMQQTGSLEWTRKRAEEEADKAIAALQA 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ W+ +L + +QR Sbjct: 302 LPETPWRSALEALAHMSVQR 321 >gi|167856324|ref|ZP_02479054.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755] gi|167852554|gb|EDS23838.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755] Length = 327 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 129/320 (40%), Positives = 198/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L DM+ V+ IL ++ SDV +I + Y+I GGKR+RP++ + A + Y+ Sbjct: 7 LEQILTLVKADMQAVDQAILAQLNSDVVLINQLGHYIISGGGKRIRPLIAVLAANTVGYK 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ A +EFIHTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF M Sbjct: 67 GQEHITCAAFVEFIHTATLLHDDVVDESDMRRGRETANARFGNAASVLVGDFIYTRAFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S + L+ +S +AEGE++QL + + TE +Y+ VI SKTA LF AA + S Sbjct: 127 MASLRSLDVLQVMSDATNVIAEGEVQQLMNVNDPETTEANYMQVIYSKTARLFEAASQCS 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G + A++ YG LG AFQLVDD+LDY ++GKNIG+D GKPTLP++ Sbjct: 187 AIVSGADQATVIAMRDYGRYLGTAFQLVDDILDYSANAEQLGKNIGDDLAEGKPTLPLLH 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G +++ + I G E L + IM E+++L T RA QKA D++ Sbjct: 247 AMRSGNRQQAALIREAIEQGG-KREALDEILAIMAEHKSLDYTMERAKQEAQKAVDAIAI 305 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 306 LPESEYKQALISLAYLSVDR 325 >gi|294634497|ref|ZP_06713032.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685] gi|291092011|gb|EFE24572.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685] Length = 323 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 135/321 (42%), Positives = 192/321 (59%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEKITELTAQDMADVNAKILHQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALHYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDRHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S LE +S +AEGE+ QL + D++EE+Y+ VI SKTA LF AA + S Sbjct: 123 MTSLQSLRILELMSAATNVIAEGEVMQLMNVNDPDISEENYMQVIYSKTARLFEAAAQCS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAGADTHQELALQDYGRYLGTAFQLIDDLLDYDADGATLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G+ + I G L M++ +L T RA KA +L Sbjct: 243 AMRHGSPERSAMIRQAIEQGN-GRHLLDPVLETMQQVGSLDYTRRRAEEEADKAIAALAV 301 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 L DS +K++L+ + + + R Sbjct: 302 LDDSPYKQALIGLANLSVNRT 322 >gi|157368719|ref|YP_001476708.1| octaprenyl diphosphate synthase [Serratia proteamaculans 568] gi|157320483|gb|ABV39580.1| Polyprenyl synthetase [Serratia proteamaculans 568] Length = 323 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQITELTAQDMAAVNATILEQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALHYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ + +AL+ YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++ Sbjct: 183 AILSDASVAEEKALQDYGRYLGTAFQLIDDLLDYSADGSTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A +K + I G L+ M++ +L T RA KA +L+ Sbjct: 243 AMHNSEGEQKAMIRGAIEQGN-GRHLLEPVLQAMQQCGSLEYTRQRAEEEADKAIAALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S + +L + +QR Sbjct: 302 LPESPHRSALEGLAHLAVQR 321 >gi|89256379|ref|YP_513741.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica LVS] gi|115314825|ref|YP_763548.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica OSU18] gi|254367716|ref|ZP_04983737.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica 257] gi|89144210|emb|CAJ79480.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica LVS] gi|115129724|gb|ABI82911.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica OSU18] gi|134253527|gb|EBA52621.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica 257] Length = 325 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 132/325 (40%), Positives = 198/325 (60%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALVKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQNSVRQAL---KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 LI+ + + K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GLISIDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A T++++ K I G+ + + +++++ A+ + A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|70732635|ref|YP_262398.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5] gi|68346934|gb|AAY94540.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5] Length = 322 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 129/321 (40%), Positives = 191/321 (59%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDGIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANAMWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMRILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AG +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALAGATEEQAEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G +E+L+ + + +L T A Y +A L L Sbjct: 244 MREGTPEQAALVRQAIQKG--GIEDLESIRAAVEASGSLDYTAQLARDYVARAITCLEAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PPSEYRDALVELSEFAVARTH 322 >gi|254369351|ref|ZP_04985363.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp. holarctica FSC022] gi|157122301|gb|EDO66441.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp. holarctica FSC022] Length = 325 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 131/325 (40%), Positives = 198/325 (60%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQNSVRQAL---KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + + K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A T++++ K I G+ + + +++++ A+ + A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|83311261|ref|YP_421525.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] gi|82946102|dbj|BAE50966.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] Length = 339 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 151/318 (47%), Positives = 221/318 (69%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L L D++KVN I+ R+ S VEMIP + ++I +GGKRLRP+LTLA+A + + G+ Sbjct: 20 ALVALVKDDLQKVNHAIVDRMHSPVEMIPQLAGHIIAAGGKRLRPVLTLASAKLAGHTGE 79 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 H+ LA +EFIHTATLLHDDVVD+S LRRG+ +A ++GN+ SVLVGDFL S++F +++ Sbjct: 80 RHIKLAACVEFIHTATLLHDDVVDESELRRGQASANALFGNKPSVLVGDFLFSRSFELMV 139 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E S L LS + +AEGE+ QL + + + +E+ YL VI+SKTA LF+AA + ++ Sbjct: 140 EDGSLSVLAILSRASSVIAEGEVLQLITANDTETSEDSYLEVIRSKTAALFAAACRIGAV 199 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +A +AL+SYG+NLGIAFQL+DDVLDY + +GK +G+DFR GK TLPVILAF Sbjct: 200 VADRPKVEEEALESYGLNLGIAFQLIDDVLDYSAKQAVLGKTVGDDFREGKITLPVILAF 259 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 +RG E+ FW+ + + S E++ +A +M ++ +L T RA YG+ A+D+L P Sbjct: 260 RRGGDEERAFWRRCLEELDQSDEDIGQAIKLMEKHGSLAATIARARHYGEIARDALGIFP 319 Query: 303 DSSWKKSLMEVVDFCLQR 320 DS K+++++V+DFC+ R Sbjct: 320 DSPVKQAMIDVIDFCIDR 337 >gi|311693395|gb|ADP96268.1| trans-hexaprenyltranstransferase [marine bacterium HP15] Length = 322 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 138/321 (42%), Positives = 199/321 (61%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + D D +VN LI++R+ SDV ++ + +Y+I SGGKRLRP+L L ++ Y Sbjct: 4 QRIYDTVADDFSRVNDLIIQRLSSDVPLVEKIAQYIIESGGKRLRPLLVLLSSQAAGYEE 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 ++H+ LA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL ++AF M+ Sbjct: 64 NDHLKLAAVIEFLHTATLLHDDVVDTSDMRRGRSTANARWGNAPSVLVGDFLYARAFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E KS ++ LS +AEGE+ QL KN D+TEE Y+ VI +KTA+LF AA + Sbjct: 124 VELKSLRIMDVLSHATAVIAEGEVMQLMNVKNPDLTEEQYMKVIHNKTAMLFEAASHTGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L+A LK YG +LG+AFQLVDDVLDY+G+ MGKN+G+D GK TLP+I A Sbjct: 184 LLAHASAEQELGLKDYGKHLGLAFQLVDDVLDYQGDAEAMGKNVGDDLAEGKTTLPLIHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 GT E+ + I G + ++L + I+ + A+ T +A + A+ L L Sbjct: 244 MSHGTGEERQLIRQAIRKGGL--DDLPRILDIVERSGAIEYTMAKAREQAELAQTCLLSL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 PDS K+++ + + + R++ Sbjct: 302 PDSGHKEAMELLTEVAVARVS 322 >gi|118497514|ref|YP_898564.1| octaprenyl diphosphate synthase [Francisella tularensis subsp. novicida U112] gi|195536208|ref|ZP_03079215.1| polyprenyl synthetase family protein [Francisella tularensis subsp. novicida FTE] gi|118423420|gb|ABK89810.1| octaprenyl diphosphate synthase [Francisella novicida U112] gi|194372685|gb|EDX27396.1| polyprenyl synthetase family protein [Francisella tularensis subsp. novicida FTE] Length = 325 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 130/325 (40%), Positives = 200/325 (61%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQ---NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + + + +++YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A T++++ K I G+ + + +++++ A+ + A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|56708131|ref|YP_170027.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670602|ref|YP_667159.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis FSC198] gi|134301942|ref|YP_001121911.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|208779313|ref|ZP_03246659.1| polyprenyl synthetase family protein [Francisella novicida FTG] gi|224457222|ref|ZP_03665695.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254370617|ref|ZP_04986622.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874931|ref|ZP_05247641.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|56604623|emb|CAG45677.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320935|emb|CAL09060.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis FSC198] gi|134049719|gb|ABO46790.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151568860|gb|EDN34514.1| hypothetical protein FTBG_00405 [Francisella tularensis subsp. tularensis FSC033] gi|208745113|gb|EDZ91411.1| polyprenyl synthetase family protein [Francisella novicida FTG] gi|254840930|gb|EET19366.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159332|gb|ADA78723.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis NE061598] Length = 325 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 131/325 (40%), Positives = 198/325 (60%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQNSVRQAL---KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + + K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A T++++ K I G+ + + +++++ A+ + A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|219871055|ref|YP_002475430.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165] gi|219691259|gb|ACL32482.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165] Length = 327 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 130/320 (40%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L DM+ V+ IL ++ SDV +I + Y+I GGKR+RP++ + A + Y+ Sbjct: 7 LEQILTLVKADMQAVDQAILAQLNSDVVLINQLGHYIISGGGKRIRPLIAVLAANTVGYK 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ A +EFIHTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF M Sbjct: 67 GQEHITCAAFVEFIHTATLLHDDVVDESDMRRGRETANARFGNAASVLVGDFIYTRAFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + L+ +S +AEGE++QL N + TE +Y+ VI SKTA LF AA + S Sbjct: 127 MASLCSLDVLQVMSDATNVIAEGEVQQLMNVNNPETTEANYMQVIYSKTARLFEAASQCS 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G + A++ YG LG AFQLVDD+LDY ++GKNIG+D GKPTLP++ Sbjct: 187 AIVSGADQATVIAMRDYGRYLGTAFQLVDDILDYSANAEQLGKNIGDDLAEGKPTLPLLH 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G ++ + I G E L + IM E+++L T RA QKA D++ Sbjct: 247 AMRSGNLQQAALIREAIEQGG-KREALDEILAIMAEHKSLDYTMERAKQEAQKAVDAIAI 305 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 306 LPESEYKQALISLAYLSVDR 325 >gi|260429621|ref|ZP_05783598.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45] gi|260420244|gb|EEX13497.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45] Length = 333 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 151/319 (47%), Positives = 213/319 (66%), Gaps = 1/319 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L +L +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA+A + Y G Sbjct: 14 LAELLSEDMGGVNALIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLASARLCGYEGP 73 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 HV LA +EFIHTATLLHDDVVD+S+ RRG+ A L+W N++SVLVGD+L +++F +++ Sbjct: 74 YHVHLAATVEFIHTATLLHDDVVDESSQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMV 133 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E + L LS A T+AEGE+ QL+ +++L TE+ YL V++ KTA LFSAA EV + Sbjct: 134 EPGNLRVLNILSNAAATIAEGEVLQLTAAQDLKTTEDIYLQVVRGKTAALFSAATEVGGV 193 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 IAGV QAL +YG LGIAFQ+ DD+LDY+G+ + GKN+G+DFR K TLP+I A Sbjct: 194 IAGVPEEQVQALFTYGDALGIAFQIADDLLDYQGDSSATGKNVGDDFRERKLTLPLIKAV 253 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 R + E+ FW TI G +L+ A ++ + AL DT A ++ +KAKD++ LP Sbjct: 254 ARASDEERAFWVRTIEKGDQRDGDLEHALELLNAHAALEDTRTDALAWAEKAKDAMTELP 313 Query: 303 DSSWKKSLMEVVDFCLQRL 321 S + L+++ DF + RL Sbjct: 314 QSELRDLLIDLADFVVARL 332 >gi|260752929|ref|YP_003225822.1| trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552292|gb|ACV75238.1| Trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 337 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 156/320 (48%), Positives = 213/320 (66%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L L DM+ VN +IL R+ S+V +IP++ +LI SGGKR+RPML LA + ++ Sbjct: 16 LKPLMHLVASDMQAVNQVILDRMQSEVPLIPELAGHLISSGGKRMRPMLMLACSRLIGEP 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H LA AIEFIHTATLLHDDVVD S LRRGK A +WGN +VLVGDFLLS+AF M Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDVVDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAFEM 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E+ S ALE LS A + +GE+ QL ++ E YL +I +KTAVLF+A+ ++ Sbjct: 136 MVESGSLRALEILSNAAAIITQGEVDQLVSQYQVETDEARYLSIIGAKTAVLFAASCRIA 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG Q+L YG LGIAFQL DD +DY + MGK +G+DFR+GK TLPVIL Sbjct: 196 AVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSDSQTMGKGVGDDFRDGKVTLPVIL 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+QRG K +++FW+ I +++ +L A I++ AL DT RA YG+KA SL Sbjct: 256 AYQRGEKADRDFWREAIEGRRVADSDLDIAKILLVNTDALSDTLERARLYGEKAIQSLEA 315 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PD + K++L+E V+F + R Sbjct: 316 FPDGAVKEALIEAVEFTIAR 335 >gi|259415043|ref|ZP_05738965.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B] gi|259348953|gb|EEW60707.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B] Length = 336 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 148/322 (45%), Positives = 215/322 (66%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++L + ++E VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLA A M Y Sbjct: 15 ELLAETLASELEAVNLLIQERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYE 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F + Sbjct: 75 GDHHLKLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++T S L+ L+ + T+AEGE+ Q++ + +L TEE YL V++ KTA LFSAA EV Sbjct: 135 MVDTGSLRVLDILANASATIAEGEVLQMTAATDLRTTEEIYLQVVRGKTAALFSAATEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA ++ +AL YG LGIAFQ+ DD+LDY+G+ + GKN+G+DFR K TLPVI Sbjct: 195 GVIASATDAQVKALYDYGDALGIAFQIADDLLDYQGDTAKTGKNVGDDFRERKLTLPVIK 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T E+ FW+ TI G+ +L A +M + L T A+ + +KAK +L Sbjct: 255 AIAQATDEERAFWQRTIAKGRQEEGDLDHALELMAKYATLDATRADAFGWAEKAKSALAE 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD + L+++ D+ + RLN Sbjct: 315 LPDHPIRTMLIDLADYVVSRLN 336 >gi|241761105|ref|ZP_04759194.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374724|gb|EER64185.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 337 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 156/320 (48%), Positives = 214/320 (66%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L L DM+ VN +IL R+ S+V +IP++ +LI SGGKR+RPML LA + ++ Sbjct: 16 LKPLMHLVASDMQAVNQVILDRMQSEVPLIPELAGHLISSGGKRMRPMLMLACSRLIGEP 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H LA AIEFIHTATLLHDDVVD S LRRGK A +WGN +VLVGDFLLS+AF M Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDVVDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAFEM 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E+ S ALE LS A + +GE+ QL ++ E YL +I +KTAVLF+A+ ++ Sbjct: 136 MVESGSLRALEILSNAAAIITQGEVDQLVSQYQVETDEARYLSIIGAKTAVLFAASCRIA 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG Q+L YG LGIAFQL DD +DY + MGK +G+DFR+GK TLPVIL Sbjct: 196 AVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSDSQTMGKGVGDDFRDGKVTLPVIL 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+QRG K +++FW+ I +++ +L A I++ AL DT RA YG+KA SL+ Sbjct: 256 AYQRGEKADRDFWREAIEGRRVADSDLDIAKILLVNTDALSDTLERARLYGEKAIQSLKA 315 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PD + K++L+E V+F + R Sbjct: 316 FPDGAVKEALIEAVEFTIAR 335 >gi|251791050|ref|YP_003005771.1| octaprenyl diphosphate synthase [Dickeya zeae Ech1591] gi|247539671|gb|ACT08292.1| Trans-hexaprenyltranstransferase [Dickeya zeae Ech1591] Length = 323 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 129/320 (40%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L+ +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEQITALSAQDMAAVNQTILDQLNSDVVLINQLGNYIIGGGGKRIRPMIAVLAARALSYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S + +S +AEGE+ QL + D+TE+ Y+ VI SKTA LF AA + S Sbjct: 123 MTSLASLRVMSVMSDAVNVIAEGEVLQLMNCNDPDITEDSYMRVIYSKTARLFEAAAQAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ + AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILSDASSEQELALQEYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + ++ + I G L+ M+ +L T RA KA +++C Sbjct: 243 AMHHGNEEQRIMIRQAIEQGN-GRHLLEPVLAAMQSCGSLAYTRQRAEEEADKAITAIQC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + +QR Sbjct: 302 LPASDFRTALEGLAHLAVQR 321 >gi|146281341|ref|YP_001171494.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501] gi|145569546|gb|ABP78652.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501] gi|327479520|gb|AEA82830.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri DSM 4166] Length = 322 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 124/321 (38%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L + L ++G Sbjct: 4 QPFYQVVADDFAAVDGIIRKQLTSRVPLVEKIGDYITSAGGKRLRPLLVLLSGSALGHQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + LLA IEF+HT+TLLHDDVVD S +RRG+ A +WGN SVLVGDFL +++F M+ Sbjct: 64 EQLRLLAAIIEFLHTSTLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYARSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELDSMPVMRIISQATRVIAEGEVLQLSKVRDASTTEEIYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AG R+AL+++G +LGIAFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I Sbjct: 184 TLAGASEQQREALRTFGDHLGIAFQLVDDLLDYQGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G + E+L+ + + AL T A Y ++A L + Sbjct: 244 MREGTAEQAALVRKAIQKGGL--EDLESIRSAVEASGALDYTAKLARDYAERAIACLEVI 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P + ++ +L+++ F + R + Sbjct: 302 PANQYRDALVQLCRFAVARTH 322 >gi|5712726|gb|AAD47627.1| octylprenyl diphosphate synthase-like protein [Pseudomonas sp. BG33R] Length = 322 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 125/321 (38%), Positives = 190/321 (59%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I +++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDGIIKQQLTSKVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDF+ S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRETANAMWGNAPSVLVGDFMYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+ F A+ ++ Sbjct: 124 VELGSMPVMKILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMFFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + G +AL+++G NLG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCGATAEQAEALRTFGDNLGVAFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G +E+L+ + + +L T A Y +A L L Sbjct: 244 MREGTPEQAALVRKAIQKG--GIEDLEAIRAAVEASGSLEYTAQLARDYVARAIQCLEAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PASEYRDALVELSEFAVARTH 322 >gi|254374334|ref|ZP_04989816.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548] gi|151572054|gb|EDN37708.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548] Length = 325 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 130/325 (40%), Positives = 200/325 (61%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYS 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQ---NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + + + +++YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A T++++ K I G+ + + +++++ A+ + A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDQIIAMVKDSGAVDYSYKVACQYADLAKQQ 300 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|170751717|ref|YP_001757977.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] gi|170658239|gb|ACB27294.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] Length = 339 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 166/322 (51%), Positives = 225/322 (69%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L M +VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + Y Sbjct: 16 LNDLVALVADGMARVNTTILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACAQLCGYA 75 Query: 61 G--DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 G + V LA ++EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF Sbjct: 76 GATEGDVKLAASVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAF 135 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 M++E S AL+ LS A +AEGE+ QL+ +KNL+ E YL VI+ KTA LF+AA E Sbjct: 136 RMMVEVGSLRALDILSAAATVIAEGEVMQLTNAKNLETDEAAYLAVIRGKTAELFAAACE 195 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 V ++AG + + A +SYGMNLGIAFQL+DDVLDY G E+GKN+G+DFR GK TLP+ Sbjct: 196 VGPVLAGRPEAEQAAARSYGMNLGIAFQLIDDVLDYGGTSAELGKNVGDDFREGKITLPI 255 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 +LA++R ++ E+ FW+ T+ G+I +L+ A +++ + AL +T RA+ YG +A+ +L Sbjct: 256 VLAYRRASEGERGFWRRTLQQGEIGETDLETALDLLQRHGALEETVARAHHYGAEARAAL 315 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 PD K +L+ V+FC+ R Sbjct: 316 DIFPDGPVKAALIGAVEFCVAR 337 >gi|254372879|ref|ZP_04988368.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. novicida GA99-3549] gi|151570606|gb|EDN36260.1| octaprenyl-diphosphate synthase [Francisella novicida GA99-3549] Length = 325 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 131/325 (40%), Positives = 198/325 (60%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQNSVRQAL---KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + + K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQGYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A T++++ K I G+ + + +++++ A+ + A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDQIIAMVKDSGAVDYSYKVACQYADLAKQQ 300 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 301 IDFLPDSEYKQAMILLCDLAVNRKN 325 >gi|157374092|ref|YP_001472692.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3] gi|157316466|gb|ABV35564.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3] Length = 323 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 137/322 (42%), Positives = 199/322 (61%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKR+RP+L++ A ++Y+ Sbjct: 3 LNAIRQLADNDMQNVNKLIYKQLESDVALINQLGFYIINGGGKRMRPLLSILAARAIDYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GEAHLKLAAIIEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + E LE L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++ Sbjct: 123 MTELGNMEVLEVLADATNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 183 GVLAQSPIEAQNALADYGKFLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT++E+ ++ I G +N+++ + AL T RA KA ++L Sbjct: 243 AMAHGTEKEQELIRTAIEKGD-GTQNIEEILNALHSCGALDYTFRRALEESDKAIEALSI 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 +P+S +K++L+ + ++R N Sbjct: 302 IPESDYKQALISLAKIAVERSN 323 >gi|46203612|ref|ZP_00051268.2| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum magnetotacticum MS-1] Length = 312 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 171/312 (54%), Positives = 229/312 (73%), Gaps = 1/312 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVLLACA 70 ME+VN IL R SDV MIP+V +LI SGGKRLRP+LTLA A + Y GD V LA A Sbjct: 1 MERVNATILSRTGSDVAMIPEVANHLIASGGKRLRPILTLACADLCGYGDGDGAVKLAAA 60 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EF+HTATLLHDDVVD+S +RRG+VAAR+ WGN+ SVLVGDFLL QAF M++E S AL Sbjct: 61 VEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFRMMVEVGSLRAL 120 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS A +AEGE+ QL+ +KN + +E++YL VI+ KTA LF+AA EV ++AG + Sbjct: 121 DILSAAATVIAEGEVMQLTAAKNTETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPEAE 180 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 + A ++YGMNLGIAFQL+DDVLDY G +GKN+G+DFR GK TLP++LA +RGT E+ Sbjct: 181 QVACRAYGMNLGIAFQLIDDVLDYGGTSAALGKNVGDDFREGKITLPIVLALRRGTDEER 240 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FW+ T+ ++ +L++A I+R NRAL DT RA+ YG A+++L LP+ + K +L Sbjct: 241 AFWRRTLEREELEDGDLEQALAILRRNRALEDTITRAHHYGTMAREALAPLPNGAMKSAL 300 Query: 311 MEVVDFCLQRLN 322 ++VVDFC+ R + Sbjct: 301 LQVVDFCIARAH 312 >gi|224588345|gb|ACN58969.1| octaprenyl diphosphate synthase [uncultured bacterium BLR10] Length = 348 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 135/315 (42%), Positives = 204/315 (64%), Gaps = 2/315 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DM+ VN +I +++ S+V ++ + +Y+I +GGKR+RP+L L A Y+G H L Sbjct: 36 IAADMDAVNTVIRRKLHSEVSLVNQIAEYIISAGGKRIRPVLVLLVANAYSYKGTAHHEL 95 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S+LRRG+ A ++GN SVLVGDFL S+AF M++ + Sbjct: 96 AAVVEFIHTATLLHDDVVDESSLRRGRATANALFGNAASVLVGDFLYSRAFQMMVGLNNM 155 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ LS +AEGE+ QL + DV++E YL VI+SKTA LF AA E+ +L++G Sbjct: 156 RVMQILSDATNVIAEGEVLQLLNMHDPDVSQERYLQVIRSKTAKLFEAAAELGALVSGAN 215 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ +A YG +LG AFQL+DDVLDY G+ NE+GKN+G+D R GKPTLP+I + GT Sbjct: 216 DAQIEAAGEYGRSLGTAFQLIDDVLDYAGDANEIGKNVGDDLREGKPTLPLIYLMENGTP 275 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ +S I G ++ + + AL T +A + ++A +++ LPDS +K Sbjct: 276 EQRELVRSCIEQG--DEQHFDTILAAITSSGALEYTRQQAVTAAKRAAEAIAGLPDSIYK 333 Query: 308 KSLMEVVDFCLQRLN 322 +SL+++ DF + R + Sbjct: 334 ESLLQLADFSVNRTH 348 >gi|99078713|ref|YP_611971.1| farnesyltranstransferase [Ruegeria sp. TM1040] gi|99035851|gb|ABF62709.1| Farnesyltranstransferase [Ruegeria sp. TM1040] Length = 336 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 146/322 (45%), Positives = 211/322 (65%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++L + ++E VN LI +R+ S IP+V +L+ +GGKRLRPMLTLA A M Y Sbjct: 15 ELLAETLAPELEAVNLLIRERMASQHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYE 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F + Sbjct: 75 GEHHLKLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++T S L+ L+ + T+AEGE+ Q++ + +L TEE YL V++ KTA LFSAA EV Sbjct: 135 MVDTGSLRVLDILANASATIAEGEVLQMTAATDLGTTEEIYLQVVRGKTAALFSAATEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + +AL YG LGIAFQ+ DD+LDY+G+ + GKN+G+DFR K TLPVI Sbjct: 195 GVIAGASEAQVKALFDYGDALGIAFQIADDLLDYQGDTAKTGKNVGDDFRERKLTLPVIK 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + E+ FW TI G+ +L+ A +M + L T A + KAK +L Sbjct: 255 AIAQAGDEERAFWHRTIAKGRQEEGDLEHALSLMAKYATLEATRADAIGWADKAKSALAD 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+ + L+++ D+ + RLN Sbjct: 315 LPEHPIRTLLIDLADYVVSRLN 336 >gi|240850066|ref|YP_002971459.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup] gi|240267189|gb|ACS50777.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup] Length = 358 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 166/322 (51%), Positives = 227/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L +LT KDME+VN IL S+VEMIP++ +LI SGGKRLRPM+TLA+A M Y+ Sbjct: 37 LQSLVNLTQKDMERVNQFILSMAKSEVEMIPEISNHLISSGGKRLRPMITLASAHMFGYQ 96 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H+ LA A+EF+HTATLLHDDV+D+S LRRGK AR++WGNQ SVLVGDFLL QAF M Sbjct: 97 SDGHIKLATAVEFMHTATLLHDDVIDESNLRRGKSTARMIWGNQASVLVGDFLLGQAFKM 156 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL L+ A +AEGE+ QLS +KN+ + DYL +I +KTA LFSAA EV Sbjct: 157 MVDVGSIEALSVLANAAAIIAEGEVMQLSAAKNIKTSPSDYLKIINAKTAALFSAAAEVG 216 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + R +L+ YG +LG+AFQL+DD LDY G +GKNIG+DFR GK T+PVI+ Sbjct: 217 PIVAGYGHKERSSLREYGTSLGLAFQLIDDALDYSGSAQNLGKNIGDDFREGKITMPVII 276 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++RG EKNFWK + DG + E A ++ + ++ DT +A YG+ A D+L Sbjct: 277 AYERGNIVEKNFWKQALEDGNNNNEAFAYAQHLIEKYDSITDTIEQARIYGKHAIDALIP 336 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + ++ +L+E V+FC+ R+N Sbjct: 337 MNENLAYNALVETVEFCIARVN 358 >gi|56551460|ref|YP_162299.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543034|gb|AAV89188.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 337 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 156/320 (48%), Positives = 214/320 (66%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L L DM+ VN +IL R+ S+V +IP++ +LI SGGKR+RPML LA + ++ Sbjct: 16 LKPLMHLVASDMQAVNQVILDRMQSEVPLIPELAGHLISSGGKRMRPMLMLACSRLIGEP 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H LA AIEFIHTATLLHDDVVD S LRRGK A +WGN +VLVGDFLLS+AF M Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDVVDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAFEM 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E+ S ALE LS A + +GE+ QL ++ E YL +I +KTAVLF+A+ ++ Sbjct: 136 MVESGSLRALEILSNAAAIITQGEVDQLVSQYQVETDEARYLSIIGAKTAVLFAASCRIA 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG Q+L YG LGIAFQL DD +DY + MGK +G+DFR+GK TLPVIL Sbjct: 196 AVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSDSQTMGKGVGDDFRDGKVTLPVIL 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+QRG K +++FW+ I +++ +L A I++ AL DT RA YG+KA SL+ Sbjct: 256 AYQRGEKADRDFWREAIEGRRVADSDLDIAKILLVNTDALSDTLERARLYGEKAIQSLKA 315 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PD + K++L+E V+F + R Sbjct: 316 FPDGAVKEALVEAVEFTIAR 335 >gi|82702937|ref|YP_412503.1| farnesyltranstransferase [Nitrosospira multiformis ATCC 25196] gi|82411002|gb|ABB75111.1| Farnesyltranstransferase [Nitrosospira multiformis ATCC 25196] Length = 322 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 194/320 (60%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L DM +V+ +I +++ S+V +I V +Y+I SGGKRLRP L + +A Y Sbjct: 3 IERIRSLIAPDMGRVDTVIREKLHSEVVLIRQVSEYIINSGGKRLRPALVILSAGAFGYT 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA +EFIHTATLLHDDVVD S LRR K A ++GN SVLVGDFL S+AF M Sbjct: 63 GQYHYNLAAIVEFIHTATLLHDDVVDASELRRSKATANALFGNAASVLVGDFLYSRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + + L+ T+AEGE+ QL ++ DV EE+YL VI+ KTA LF AA + Sbjct: 123 MVEVDNMRVMRVLADATNTIAEGEVLQLLNVRDPDVDEENYLRVIRYKTAKLFEAATRLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + +A+ YGM+LG AFQL DD+LDY G+ E GKN+G+D GKPTLP+I Sbjct: 183 AILGNASPAEEEAMAVYGMHLGTAFQLTDDMLDYSGDYQETGKNLGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G+ + +S I G + ++++ AL RA + + A + + Sbjct: 243 AMKTGSGAQAQIIRSAIERG--GEGGFQPVLEVIQQTGALDYARQRAQAESETASNMISS 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +K+ L+++ F + R Sbjct: 301 LPDSDYKQCLLDLSTFAVAR 320 >gi|257465194|ref|ZP_05629565.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202] gi|257450854|gb|EEV24897.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202] Length = 327 Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 130/320 (40%), Positives = 202/320 (63%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ VN IL ++ S+V +I + Y+I GGKR+RP++T+ A L Y+ Sbjct: 7 LEQIQALAAEDMQAVNAEILAQLNSEVPLINQLGFYIISGGGKRIRPLITVLAARALGYQ 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGD++ +++F M Sbjct: 67 GAKQITTAAFIEFVHTATLLHDDVVDESDMRRGRETANAAFGNAASVLVGDYIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S E L+ +S LAEGE++QL + + TEE+Y+ VI +KTA LF AA + Sbjct: 127 MTSVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEENYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + ALK+YG LG AFQLVDD+LDY +GKN+G+DF GKPT+P++ Sbjct: 187 AIVANASKEIEIALKNYGCYLGTAFQLVDDILDYSANAQALGKNVGDDFVEGKPTMPLLH 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G + + N + I G + EN+ + IM E+++L T +A + QKA D++ Sbjct: 247 AMRHGNEAQANMIRQAIEQGG-NRENIDEVLAIMAEHKSLDYTMEKAKAEAQKAVDAIAI 305 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 306 LPESEYKQALISLAYLSVDR 325 >gi|212636824|ref|YP_002313349.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3] gi|212558308|gb|ACJ30762.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3] Length = 323 Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 144/320 (45%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y Sbjct: 3 LNAIRQLADSDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSILAARAIDYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GESHLKLAAIIEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E KS E LE L+ LAEGE+ QL + D TE+ Y+ VI KTA LF AA ++ Sbjct: 123 MTELKSLEVLEILADATNVLAEGEVLQLMNCNDPDTTEDSYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+A V+ AL YG LG AFQL DD+LDY E E+GKNIG+D GKPTLP+I Sbjct: 183 GLLAESSEEVQTALAEYGKFLGTAFQLTDDLLDYTAETEELGKNIGDDLAEGKPTLPLIF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G+ EK + I G E+++ ++ AL TE RA KA +L Sbjct: 243 AMANGSDTEKALIREAIEKGD-GTEHIEVILSALKSCGALEYTEQRAIEESNKAIAALNI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K +L+ + +QR Sbjct: 302 LPESEYKTALVSLAKIAVQR 321 >gi|254435950|ref|ZP_05049457.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] gi|207089061|gb|EDZ66333.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] Length = 322 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 135/321 (42%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ DL DM+ V+ LI +R+ SDV +I + Y+I SGGKRLRPM+ L +A Y+ Sbjct: 3 IQSAYDLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD S LRRG+ A +WG++ SVLVGDFL S+AF M Sbjct: 63 GSYHIDIAAIIEFIHTATLLHDDVVDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S +E L+ T+AEGE+ QL D TEE YL +I+SKTA LF AA ++ Sbjct: 123 MVGVDSMRVMEILARTTNTIAEGEVMQLLNCHEPDTTEECYLEIIRSKTAKLFEAATQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ ++ + + +YGM+LG AFQL DDVLDY ++GKNIG+D GKPTLP+I Sbjct: 183 AVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A +G+ ++ I G ENL + + + A+ T A KA +++ Sbjct: 243 AMSKGSTSHVKVIRNAIESG--GRENLAEVIEAIESSGAIAYTAEAARREADKAMQAVKN 300 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 +P S ++++L+ + F R Sbjct: 301 IPASPYQEALLNLAKFAAYRT 321 >gi|145300249|ref|YP_001143090.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853021|gb|ABO91342.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp. salmonicida A449] Length = 323 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 137/319 (42%), Positives = 196/319 (61%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + L DM VN LIL R+ SDV +I + Y++ +GGKR+RPMLT+ A L Y G Sbjct: 4 QTIRALCAADMTAVNELILARLQSDVSLINQLGFYIVSAGGKRMRPMLTVMAARALGYEG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H+ LA IEFIHT+TLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M+ Sbjct: 64 QDHLKLAAIIEFIHTSTLLHDDVVDESDLRRGRETANALFGNAASVLVGDYLYSRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E + +E LS T+AEGE+ QL + D TE+ Y+ VI KTA LF AA +++ Sbjct: 124 SELSNLRVMEILSDATNTIAEGEVLQLMNCNDPDTTEQSYMTVIYCKTAKLFEAATRLAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ V QA+ YG LG AFQ++DDV+DY + +EMGKN+G+D GKPTLP++ A Sbjct: 184 VLTHQPEPVEQAMTDYGKYLGTAFQIIDDVMDYCSQSDEMGKNVGDDLAEGKPTLPLLRA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ E+ + I + + +E+L + I+ AL + RA KA +L L Sbjct: 244 MEVGSPEERQLVRDAI-EHRNGMEHLDQILGILDRTGALEYSRMRAREEADKAIAALAIL 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS K++L + +QR Sbjct: 303 PDSQHKQALETLAQMAVQR 321 >gi|167627921|ref|YP_001678421.1| polyprenyl synthetase family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597922|gb|ABZ87920.1| polyprenyl synthetase family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 325 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 130/325 (40%), Positives = 203/325 (62%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K +++L +D+E N I+ + S+V +I + Y+I SGGKRLRP+L + + L Y Sbjct: 4 LKDIQNLIKQDIENNNQFIINSLSSEVVLINQISHYIINSGGKRLRPLLVMLFSRALNYT 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GNDHLACAAIIEFIHTATLLHDDVVDDSHLRRGKETANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N++++EEDY +VI KTA LF AA E++ Sbjct: 124 MVGLDNMQIMQILADATNKISEGEVLQLLNARNIELSEEDYTNVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQNSVRQAL---KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + S + K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQSYSKLQNSIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A + E+ K I G+ ++ + I++ + A+ + A Y K+K+S Sbjct: 244 TIYALANTSSAEQKKIKDAIEKGQY---DISEIINIVKSSGAVEYSYQVACQYADKSKES 300 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LP+S +K++++ + D ++R + Sbjct: 301 ISFLPESEYKQAMILLCDLAVKRKS 325 >gi|240950200|ref|ZP_04754487.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305] gi|240295287|gb|EER46073.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305] Length = 327 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 201/320 (62%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ VN IL ++ S+V +I + Y+I GGKR+RP++T+ A L Y+ Sbjct: 7 LEQIQALAAEDMQAVNAEILAQLNSEVPLINQLGFYIISGGGKRIRPLITVLAARALGYQ 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGD++ +++F M Sbjct: 67 GAKQITTAAFIEFVHTATLLHDDVVDESDMRRGRETANAAFGNAASVLVGDYIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S E L+ +S LAEGE++QL + + TEE+Y+ VI +KTA LF AA + Sbjct: 127 MTSVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEENYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + ALK+YG LG AFQLVDD+LDY +GKN+G+DF GKPT+P++ Sbjct: 187 AIVANASKEIEIALKNYGCYLGTAFQLVDDILDYSANAQALGKNVGDDFVEGKPTMPLLH 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G + + N + I G EN+ + IM E+++L T +A + QKA D+L Sbjct: 247 AMRHGNEAQANMIRQAIEQGG-DRENIDEVLAIMAEHKSLDYTMSKAKAEAQKAVDALAI 305 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 306 LPESEYKQALISLAYLSVDR 325 >gi|49473966|ref|YP_032008.1| octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse] gi|49239469|emb|CAF25820.1| Octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse] Length = 356 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 166/322 (51%), Positives = 226/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L +LT DME+VN IL SD+EMIP++ +LI SGGKRLRPM+TLA+A M +Y+ Sbjct: 35 LQSLINLTKDDMERVNKFILSMAKSDIEMIPEISNHLISSGGKRLRPMITLASAHMFDYQ 94 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D H+ LA A+EF+HTATLLHDDV+D+S LRRGK AR++WGNQ S+LVGDFLL QAF + Sbjct: 95 NDGHIKLATAVEFMHTATLLHDDVIDESNLRRGKSTARMIWGNQASILVGDFLLGQAFKL 154 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL L+ A +AEGE+ QLS KN++ + DYL +I +KTA LFSAA EV Sbjct: 155 MVDVGSIEALSVLANAAAIIAEGEVMQLSAVKNIETSTSDYLKIINAKTAALFSAAAEVG 214 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + R AL+ YG LG+AFQL+DDVLDY G +GKNIG+DFR GK T+PVIL Sbjct: 215 PIIAGYKYKERFALREYGTLLGLAFQLIDDVLDYGGTAKHLGKNIGDDFREGKITMPVIL 274 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+ RG EK FWK + + + E A ++ + +L DT +A +YG++A ++L Sbjct: 275 AYARGNTAEKAFWKQALENCNNNDETFAHAQHLIEKYDSLTDTIEQARAYGKRATNALAS 334 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + +S +L+E VDFC+ R+N Sbjct: 335 MNESPAHSALIETVDFCIARVN 356 >gi|312115019|ref|YP_004012615.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311220148|gb|ADP71516.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 338 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 160/322 (49%), Positives = 230/322 (71%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L +M +VN +IL + SDV +IP++ ++LI SGGKRLRPMLT+ A M Y Sbjct: 17 LEPLLRLVHDEMGEVNNIILSQARSDVALIPELARHLINSGGKRLRPMLTIGAAKMCGYE 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H++LA ++EF+HTATLLHDDVVD+S +RRGK +AR++WGNQ SVLVGDFLL QAF M Sbjct: 77 GTGHIMLAASVEFMHTATLLHDDVVDESDMRRGKKSARMLWGNQASVLVGDFLLGQAFRM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S AL+ LS + +AEGE+ QL+ SKNL TEE+YL+VI SKTA LF+AA E+ Sbjct: 137 MVDVGSLGALKVLSEASSVIAEGEVWQLAASKNLATTEEEYLNVIISKTAALFAAAAEIG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + AL+ YG N+G+AFQL+DD LDY GE +GK +G+DFR GK TLPV+L Sbjct: 197 AILTNRGPEEQAALRLYGTNIGLAFQLIDDALDYSGEAASLGKCVGDDFREGKITLPVVL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +++RGT E+ FW+ T+ +G I +L+ A IMR + A+ +T RA YG++A+++L Sbjct: 257 SYRRGTPEERAFWRRTLQEGSIEDGDLEHAIQIMRRHNAIEETIQRAVYYGKEAREALAI 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P +K+L++ VDF + R++ Sbjct: 317 FPAGEARKALIDAVDFSIARMH 338 >gi|152978590|ref|YP_001344219.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z] gi|150840313|gb|ABR74284.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z] Length = 330 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 133/321 (41%), Positives = 197/321 (61%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM+KVN IL ++ SDV +I + Y+I GGKR+RPM+ L A L Y Sbjct: 10 IKAIQALIEPDMQKVNTEILAQLNSDVALINQLGFYIIQGGGKRIRPMIALLAARALNYE 69 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ + A IEFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 70 GEKMPVCAAFIEFIHTASLLHDDVVDESDMRRGRATANAAFGNAASVLVGDFIYTRAFQL 129 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S + L +S LAEGE++QL + + TEE+Y+ VI KTA LF + + + Sbjct: 130 MAKLNSLKMLTIMSDATNVLAEGEVQQLMNVNDPETTEENYMKVIYRKTARLFEVSTQAA 189 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL+ YG LG AFQLVDDVLDY + MGKN+G+D GKPTLP++ Sbjct: 190 AIMANADEKIESALQQYGRYLGTAFQLVDDVLDYSAQAETMGKNVGDDLAEGKPTLPLLH 249 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT+ + +S I G E + + IM ++++L RA + QKA D+L Sbjct: 250 AMRHGTEEQSALIRSAIEQGG-KREIIAEVLAIMAQHKSLDHAMERAKAEAQKAVDALTI 308 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LPD+ +K++L+ + + R Sbjct: 309 LPDNEYKRALISLAYQSVNRT 329 >gi|62260098|gb|AAX77879.1| unknown protein [synthetic construct] Length = 360 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 131/325 (40%), Positives = 198/325 (60%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 30 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 89 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 90 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 149 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 150 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 209 Query: 181 SLIAGVQNSVRQAL---KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + + K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 210 GVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 269 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A T++++ K I G+ + + +++++ A+ + A Y AK Sbjct: 270 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 326 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D + R N Sbjct: 327 IDFLPDSEYKQAMILLCDLAVNRKN 351 >gi|241912483|gb|ACS71955.1| putative geranylgeranyl pyrophosphate synthase [Azospirillum brasilense] Length = 338 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 156/320 (48%), Positives = 221/320 (69%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L D+ VN +I++R+ S V+MIP + YLI +GGKRLRP+LTLA A + Y+ Sbjct: 17 LDDLTALVADDLSAVNEIIVQRMHSSVDMIPQLAGYLIAAGGKRLRPVLTLAAAELCGYK 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H +LA +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL S++F + Sbjct: 77 GEDHKMLAAVVEFIHTATLLHDDVVDESDLRRGLASANAVFGNKASVLVGDFLFSRSFEL 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S + L LS + +AEGE+ QL + + + +E+ YL VIK+KTA LF+AA V Sbjct: 137 MVEVGSLDVLRILSKASAVIAEGEVLQLRTTNDTETSEQAYLEVIKAKTAELFAAACRVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL YGMNLGIAFQLVDDVLDY + ++GK +G+DFR GK TLPV+L Sbjct: 197 AVVAARPQAEELALYDYGMNLGIAFQLVDDVLDYSAKQAKLGKTVGDDFREGKITLPVVL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW+ T+ + +L++A +M ++ AL DT RA YG A+D+L Sbjct: 257 AFRRGNDEERAFWRRTMEELDQQEGDLERAQELMAKHNALKDTVERARHYGSIARDALGL 316 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PD+ K +L+EV+DF ++R Sbjct: 317 FPDTPVKAALLEVLDFVIER 336 >gi|157960679|ref|YP_001500713.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345] gi|157845679|gb|ABV86178.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345] Length = 323 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 145/322 (45%), Positives = 198/322 (61%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + LT DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+ Sbjct: 3 LNAIRQLTDSDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSILAARAIDYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GDSHLKLAAIIEFIHTASLLHDDVVDESMLRRGRKTANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E +S + LE L+ LAEGE+ QL + D TE+ Y+ VI KTA LF AA ++ Sbjct: 123 MTELRSLDVLEILADATNVLAEGEVLQLMNCNDPDTTEDSYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+A V+ AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 183 GLLADSPIEVQTALADYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G EK + I G E++ ++ AL TE RA +KA +L Sbjct: 243 AMANGNDTEKALIRDAIEKGD-GTEHIDVILAALKNCGALEYTEQRAIEESEKAIAALSI 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 +PDS +KK+L+ + QR N Sbjct: 302 IPDSDYKKALISLAKIATQRSN 323 >gi|312962998|ref|ZP_07777484.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6] gi|311282767|gb|EFQ61362.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6] Length = 322 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 127/321 (39%), Positives = 191/321 (59%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I +++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDGIIKQQLTSKVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRETANAMWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMKILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + G +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCGASAEQAEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G +E+L+ + + +L T A Y +A L L Sbjct: 244 MREGTPEQAALVRKAIQKG--GIEDLESIRAAVEASGSLDYTAQLARDYVARAIKCLEAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PASEYRDALVELSEFAVARTH 322 >gi|238757559|ref|ZP_04618744.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236] gi|238704321|gb|EEP96853.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236] Length = 323 Score = 311 bits (798), Expect = 8e-83, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 LEKIIELTAPDMAAVNATILDQLNSDVVLINQLGHYIISGGGKRIRPMIAVLVARALHYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ ++AF M Sbjct: 63 GSKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDYIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL N D+TEE+Y+ VI SKTA LF AA + + Sbjct: 123 MTGLESLRVLTLMSAATNVIAEGEVLQLMNCNNPDITEENYMQVIYSKTARLFEAAAQSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A AL++YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AVLAEASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT + + I G L+ M++ +L T RA KA +L+ Sbjct: 243 AMHNGTSEQALMIRQAIEQGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAIAALQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ ++++L + +QR Sbjct: 302 LPENEYRQALEGLAHIAVQR 321 >gi|154251178|ref|YP_001412002.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1] gi|154155128|gb|ABS62345.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1] Length = 339 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 164/318 (51%), Positives = 225/318 (70%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L+ L K+M+ VN I +R+ SDV M+P++ +LI SGGKRLRPMLT+A + + Y G Sbjct: 20 QLQALVAKEMQAVNEFIRERMASDVPMVPELASHLINSGGKRLRPMLTIAASRLCGYNGT 79 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +H+ LA +EF+HTATLLHDDVVD+S +RRG AR++WGNQ SVLVGDFLL +AF +++ Sbjct: 80 DHIKLAATVEFLHTATLLHDDVVDESDMRRGAKTARMLWGNQASVLVGDFLLGRAFKLMV 139 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 ETKS ALE ++ A +AEGE+ QL+ +K+ TE+ YL VI++KTA LF+AA E+ ++ Sbjct: 140 ETKSLRALEIIADAASVIAEGEVMQLAAAKDTGTTEDAYLRVIQAKTAALFAAATEIGAV 199 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 I+ S AL+SYG NLGIAFQLVDD LDY G +GKN+G+DFR GK TLPV+LAF Sbjct: 200 ISEKNGSEAAALESYGRNLGIAFQLVDDALDYGGRAASLGKNVGDDFREGKITLPVVLAF 259 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 +RG E+ FW+ T+ G +L+ A +M ++ AL DT RA YG A D+L P Sbjct: 260 RRGNAEERAFWERTLQQGDRQEGDLEHAVDLMNKHAALEDTILRARHYGAIANDALAIFP 319 Query: 303 DSSWKKSLMEVVDFCLQR 320 DS ++++L ++VDFC+ R Sbjct: 320 DSPYRQALTDLVDFCINR 337 >gi|298293858|ref|YP_003695797.1| trans-hexaprenyltranstransferase [Starkeya novella DSM 506] gi|296930369|gb|ADH91178.1| Trans-hexaprenyltranstransferase [Starkeya novella DSM 506] Length = 340 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 171/321 (53%), Positives = 232/321 (72%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L DM++VN LIL R SDV MIP+V ++LI SGGKRLRPMLTLATA + Y Sbjct: 19 IEGIVTLVRADMDRVNALILSRTGSDVTMIPEVAQHLISSGGKRLRPMLTLATAALSGYE 78 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD V LA ++EF+HTATLLHDDVVDDS +RRGK+AAR++WGN+ SVLVGDFLL QAF M Sbjct: 79 GDGAVKLAASVEFMHTATLLHDDVVDDSEMRRGKLAARMLWGNEASVLVGDFLLGQAFRM 138 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +IE S AL+ LS A +AEGE+ QL+ +KN+ E+ YL VI+ KTA LF+AA EV Sbjct: 139 MIEVGSMRALDILSTAAVVIAEGEVAQLAAAKNIATDEDAYLAVIRGKTAELFAAACEVG 198 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + A ++YGMNLGIAFQLVDD LDY G ++GKN+G+DFR GK TLP++L Sbjct: 199 PVLAGRPEAEMAAARAYGMNLGIAFQLVDDALDYGGSGADLGKNVGDDFREGKITLPIVL 258 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A +R + E+ FW+ + +G+I +L++A ++ + AL +T RA YG++AK +L Sbjct: 259 AVRRANEDERGFWRRCLEEGEIGEGDLERALALLTRHGALAETVERARFYGEEAKAALVA 318 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP + K +L++VVDFC+ R+ Sbjct: 319 LPAGTAKSALIDVVDFCISRV 339 >gi|328676037|gb|AEB28712.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida 3523] Length = 325 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 129/325 (39%), Positives = 198/325 (60%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIIDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EEDY+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEDYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIA---GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + +++YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQSYAKYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I ++++ K I +G+ + + + +++ + A+ + A Y AK Sbjct: 244 TIYTLANVNQQQQQILKKAIENGEYA---IDEIIAMVKNSGAVDYSYKIACQYADLAKQQ 300 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + D ++R N Sbjct: 301 IDFLPDSEYKQAMILLCDLAVKRKN 325 >gi|187931635|ref|YP_001891619.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712544|gb|ACD30841.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] Length = 325 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 130/325 (40%), Positives = 197/325 (60%), Gaps = 6/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L +D++ N I+ +CSDV +I + Y+I SGGKRLRP+L + A L Y Sbjct: 4 LKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALNYN 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVDDS LRRGK A V+GN SVL GDFL S+AF M Sbjct: 64 GDKHLACAAIIEFIHTATLLHDDVVDDSQLRRGKQTANNVFGNAASVLTGDFLYSRAFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + ++ L+ ++EGE+ QL ++N +++EE+Y+ VI KTA LF AA E++ Sbjct: 124 MVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSEEEYIKVIYCKTAKLFEAACELA 183 Query: 181 SLIAGVQNSVRQAL---KSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +I+ + + K+YG+ LG AFQ+ DDVLDY + +GKNIG+D GK TLP Sbjct: 184 GVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGKNIGDDLDEGKMTLP 243 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A T++++ K I G+ + + +++++ A+ + A Y AK Sbjct: 244 TIYALANVTEQQQQILKKAIEKGEY---RIDEIIAMVKDSGAVDYSYKVACQYADLAKQQ 300 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 + LPDS +K++++ + + R N Sbjct: 301 IDFLPDSEYKQAMILLCGLAVNRKN 325 >gi|256822892|ref|YP_003146855.1| polyprenyl synthetase [Kangiella koreensis DSM 16069] gi|256796431|gb|ACV27087.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069] Length = 323 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 198/320 (61%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + DL + + N +I+ R+ SDV ++ V Y++ +GGKRLRPML L A L Y+ Sbjct: 4 LDEIRDLVADEFDTTNQIIIDRLQSDVVLVNQVGHYIVAAGGKRLRPMLLLLAAKSLNYQ 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IE IHTATLLHDDVVD+S LRRG+ A ++GNQ SVLVGD+L S++F M Sbjct: 64 GKFHPNLAAVIELIHTATLLHDDVVDESDLRRGRQTANAMFGNQASVLVGDYLYSRSFQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E +E LS +A GE+ QL + DV E Y VI+ KTA+LF+AA +++ Sbjct: 124 MVEVGEMRVMEVLSETTNEVAAGEVLQLMNVNDPDVDEASYYQVIERKTAILFAAATQLA 183 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG V + L+ YG+ LG AFQLVDD LDY + E+GKN+G+D GKPTLP+I Sbjct: 184 AILAGASKDVEEGLREYGLQLGNAFQLVDDALDYAADTEELGKNVGDDLAEGKPTLPLIY 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G+ + + I G + +N+ I+++ A+ T A KA +L+ Sbjct: 244 AMQHGSDTDAQMIRQAIEQGGL--DNMDAILRIIQDTGAIEYTYQSAEKAVAKAISALKP 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+++ + L+R Sbjct: 302 LPESQYKQALIDIANLSLKR 321 >gi|229592556|ref|YP_002874675.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25] gi|229364422|emb|CAY52224.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25] Length = 322 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 191/321 (59%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDGIIKKQLTSKVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRETANAMWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMKILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + G +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCGATVEQAEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G +E+L+ + + +L T A Y +A L L Sbjct: 244 MREGTPEQAALVRKAIQKG--GIEDLEAIRAAVEASGSLEYTAQLARDYVARAIKCLEAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PASEYRDALVELSEFAVARTH 322 >gi|260912975|ref|ZP_05919460.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325] gi|260632965|gb|EEX51131.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325] Length = 358 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 129/321 (40%), Positives = 190/321 (59%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L DM+K N IL ++ S+V +I + Y+I SGGKR+RPM+ + A L Y Sbjct: 38 IETIQQLIQLDMQKTNEAILAQLNSNVALINQLGYYIIQSGGKRIRPMIAILAARALGYT 97 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D + A IEFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ ++AF + Sbjct: 98 SDEPITCATFIEFIHTATLLHDDVVDESELRRGNPTANAEFGNAASVLVGDFIYTRAFQL 157 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE++QL + + TEE+Y+ VI KTA LF AA S Sbjct: 158 MTQLNSLRILKVMSDATNVIAEGEVQQLMNVNDPNTTEENYMQVIYGKTARLFEAATHCS 217 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + +AL+ YG LG AFQLVDD+LDY +GKN+G+D GKPTLP++ Sbjct: 218 AILAKATAAQEKALQDYGRYLGTAFQLVDDILDYSSNAQTLGKNLGDDLAEGKPTLPLLH 277 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + + I G + L IM E+++L RA QKA D++ Sbjct: 278 AMHNGNPEQAKLIRDAIEQGG-KRDILDTVLAIMAEHKSLDYAMNRAKEEAQKAVDAIAL 336 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP++ +K++L+ + ++R Sbjct: 337 LPENEYKQALISLAYLSVERT 357 >gi|124265703|ref|YP_001019707.1| dimethylallyltransferase [Methylibium petroleiphilum PM1] gi|124258478|gb|ABM93472.1| Dimethylallyltransferase [Methylibium petroleiphilum PM1] Length = 330 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 140/319 (43%), Positives = 197/319 (61%), Gaps = 2/319 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 DL DM +V+ LI +R+ SDV +I + Y+I +GGKRLRPML L A L +RG Sbjct: 14 FADLVAADMGEVDALIRRRLASDVALINQISHYIISAGGKRLRPMLVLLFAQALGFRGPE 73 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 LA +EFIHTATLLHDDVVD+SALRRG+ A +GN SVLVGDFL S+AF M++ Sbjct: 74 RFELAATVEFIHTATLLHDDVVDESALRRGRDTANARFGNAASVLVGDFLYSRAFQMMVS 133 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 LE L+ +AEGE+ QL + D++ +DYL VI+ KTA LF A+ + +++ Sbjct: 134 VNRMRVLEVLADATNVIAEGEVLQLMNMHDPDLSIDDYLRVIRFKTAKLFEASARLGAML 193 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A V A YG LG AFQLVDD+LDY G + +GKNIG+D R GKPTLP+++A Sbjct: 194 ADASPGVETACADYGRALGTAFQLVDDLLDYEGATSALGKNIGDDLREGKPTLPLLVAMT 253 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 RGT +++ ++ I G+ V+ L + I+R AL T A + +A ++L LPD Sbjct: 254 RGTPAQRDVVRAAIEQGE--VQRLPEIIEIVRSTGALEATREVARAEVARACEALSVLPD 311 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S ++++L+ + +R + Sbjct: 312 SQYREALLHLCAQSTERSS 330 >gi|152998234|ref|YP_001343069.1| polyprenyl synthetase [Marinomonas sp. MWYL1] gi|150839158|gb|ABR73134.1| Polyprenyl synthetase [Marinomonas sp. MWYL1] Length = 326 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 128/328 (39%), Positives = 195/328 (59%), Gaps = 8/328 (2%) Query: 1 MKMLE--DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML- 57 M+ ++ D+ + +VN I+ ++ SD+ +I + Y+I +GGKRLRP+L L A Sbjct: 1 MQPIQIHDVVANEFGQVNDYIVSQLSSDIPLIEQIGYYIISNGGKRLRPLLVLLAAKASA 60 Query: 58 ---EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 + + D + +A IEFIHT+TLLHDDVVD+S +RRGK A WGN SVLVGDFL Sbjct: 61 ELDKPKLDQAIQMATIIEFIHTSTLLHDDVVDESDMRRGKKTANEEWGNAPSVLVGDFLY 120 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 S+AF ++++ S + + L+ +AEGE++QL + D TEE YL VI+ KTA LF Sbjct: 121 SRAFQIMVDVGSMQCMSVLAKTTNIIAEGEVQQLINCGDPDTTEESYLKVIQYKTAKLFE 180 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A ++IAG ++AL+ +GM +G AFQL+DDV+DY EMGK++G+D GKP Sbjct: 181 GAALCGAVIAGASKEHQEALRQFGMYVGTAFQLIDDVMDYTSTAEEMGKSVGDDLAEGKP 240 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 TLP+I + G K + I G + + LK ++ A+ T+ +A A Sbjct: 241 TLPLIFTMKHGPKDAVERVRQAILTGGL--DQLKSIINDVQNCGAIEYTQQKAQEQADLA 298 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +S+ LP+S +KK+L+ + + ++R N Sbjct: 299 IESIAPLPESDYKKALVALANASVKRRN 326 >gi|85058340|ref|YP_454042.1| octaprenyl diphosphate synthase [Sodalis glossinidius str. 'morsitans'] gi|84778860|dbj|BAE73637.1| octaprenyl-diphosphate synthase [Sodalis glossinidius str. 'morsitans'] Length = 323 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 188/320 (58%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM +VN I +++ S+V +I + Y+I GGKR+RPM+ + A L Y+ Sbjct: 3 IEQITELTAQDMAEVNTAIREQLNSEVALINQLGHYIISGGGKRIRPMIAVLAARALHYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GKQHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S LE +S +AEGE+ QL + D+T ++Y+ VI SKTA LF AA + S Sbjct: 123 MTALESLRVLELMSEAVNIIAEGEVLQLMNCNDPDITIDNYMRVIYSKTARLFEAASQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 AILAGADACQEAALRDYGRYLGTAFQLIDDLLDYGADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I G L+ M + +L T A KA L C Sbjct: 243 AMRNGTPEQAALIRQAIEQGN-GRHLLETVLKTMHQCDSLGYTRRCAEEEADKAIACLDC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L S ++ +L + +QR Sbjct: 302 LSPSPYRDALESLAHVAVQR 321 >gi|170725365|ref|YP_001759391.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908] gi|169810712|gb|ACA85296.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908] Length = 323 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKR+RP+L++ A ++Y Sbjct: 3 LNAIRQLADNDMQNVNKLIYKQLESDVALINQLGFYIINGGGKRMRPLLSILAARAVDYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GEAHLKLAAIIEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S E LE L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++ Sbjct: 123 MTELGSMEVLEVLADATNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A ++ AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 183 GVLADSPKEIQVALADYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G++ E+ ++ I G +++ + AL T RA +KA +L Sbjct: 243 AIAHGSETEQTLIRTAIEKGD-GTDSIDPILAALDNCGALEYTYKRAQEEAEKAIGALSI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 302 LPESDYKQALISLAKIAVAR 321 >gi|126740547|ref|ZP_01756234.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6] gi|126718348|gb|EBA15063.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6] Length = 332 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 147/322 (45%), Positives = 209/322 (64%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++L +ME VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A + Y Sbjct: 11 ELLAATLSSEMEAVNSLIQTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYE 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H+ LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F + Sbjct: 71 GEHHIKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET S + L+ L+ + T+AEGE+ Q++ + NL E YL V++ KTA LFSAA EV Sbjct: 131 MVETGSLKVLDILANASATIAEGEVLQMTAASNLATDEAVYLQVVRGKTAALFSAATEVG 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + +AL YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI Sbjct: 191 GVIAGASETEIKALFDYGDALGIAFQIADDLLDYQGDSKATGKNVGDDFRERKLTLPVIK 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T E FW TI G+ +L++A +M + + L T A ++ KA D+L Sbjct: 251 AVAQATDEEHAFWTRTIEKGRQEEGDLEQALALMAKYQTLEATRQDALNWAAKATDALTA 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+ ++ L ++ D+ + RLN Sbjct: 311 LPEHPIRQMLHDLADYVVSRLN 332 >gi|113460390|ref|YP_718452.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT] gi|112822433|gb|ABI24522.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT] Length = 326 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM+KVN IL ++ SDV +I + Y++ SGGKR+RPM+ L A L Y+ Sbjct: 6 INAIQSLIKTDMDKVNATILAQLNSDVALINQLGYYIVQSGGKRIRPMIALLAARALNYQ 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD + A +EFIHTATLLHDDVVD+S +RRG A +GN SVLVGDF+ ++AF + Sbjct: 66 GDEPITCAAFVEFIHTATLLHDDVVDESDMRRGNPTANAEFGNAASVLVGDFIYTRAFQL 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE++QL + + +E++Y+ VI SKTA LF A + + Sbjct: 126 MTKLNSLRILQIMSDATNIIAEGEVQQLMNVNDPETSEDNYMKVIYSKTARLFEVATQCA 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ A AL+ YG LG AFQLVDDVLDY +GKNIG+D GKPTLP++ Sbjct: 186 AITAQSNAEQEIALQHYGRYLGTAFQLVDDVLDYSANAATLGKNIGDDLAEGKPTLPLLH 245 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT ++ + I G + L IM E ++L +A QKA DS+ C Sbjct: 246 AMRNGTPQQSALIREAIEQGG-KRDFLDDVLAIMTEQKSLDYAMSKAKEEAQKAVDSISC 304 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ +K++L+ + ++R Sbjct: 305 LPENQYKQALISLAYLSVER 324 >gi|56477995|ref|YP_159584.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1] gi|56314038|emb|CAI08683.1| Polyprenyl synthetase (EC 2.5.1.-), gene: ISPB OR NE1915 [Aromatoleum aromaticum EbN1] Length = 322 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 135/319 (42%), Positives = 194/319 (60%), Gaps = 2/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + L DM+ V+ +I +R+ SDV +I V +Y+I SGGKRLRP L L +A + YRG Sbjct: 4 QQLYAPIATDMQAVDAVIRERLHSDVVLIRQVAEYIIHSGGKRLRPALVLFSAGAMGYRG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H LA +EFIHTATLLHDDVVD+S LRRG A ++GN SVLVGDFL ++AF M+ Sbjct: 64 QSHHQLAAVVEFIHTATLLHDDVVDESELRRGNKTANALFGNAASVLVGDFLYTRAFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + ++ L+ +AEGE+ QL N DV EDYL VI+ KTA LF AA + + Sbjct: 124 VGVGDMRVMQVLADATNIIAEGEVLQLLNCHNADVDIEDYLRVIRYKTAKLFEAATRLGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ G + + ++GM+LG AFQ++DDVLDY + GK++G+D GKPTLP+I A Sbjct: 184 ILGGANEEQERKVAAFGMHLGTAFQIIDDVLDYSSDEAATGKHLGDDLAEGKPTLPLIHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + ++ I G ++ + +RE AL + A + GQ A D+L L Sbjct: 244 MKHGTAEQSARVRNAIESG--GRDDFEAVLAAIRETGALEEARRWARAEGQFAIDALEVL 301 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P S +K +L+++ DF + R Sbjct: 302 PPSIFKDALLQLSDFAVVR 320 >gi|114771291|ref|ZP_01448711.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha proteobacterium HTCC2255] gi|114548216|gb|EAU51103.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha proteobacterium HTCC2255] Length = 329 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 150/321 (46%), Positives = 208/321 (64%), Gaps = 1/321 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 L L DM KVN LI KR+ SD IP+V ++LI +GGKRLRP+LTLA A M Sbjct: 9 QLASLLNHDMVKVNSLIKKRMASDAAPRIPEVTEHLIDAGGKRLRPLLTLAAAEMCGNTS 68 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 H+ LA +EFIHTATLLHDDVVD+S RRG+ A L+W NQ+SVLVGD+L S++F ++ Sbjct: 69 PYHIHLAATVEFIHTATLLHDDVVDESKQRRGRPTANLLWDNQSSVLVGDYLFSRSFQLM 128 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +ET + L+ L+ + T+AEGE+ QL++++NL TE+ YL VI+ KTA LF AA +V Sbjct: 129 VETGNLRVLDILANASATIAEGEVLQLTVAQNLSTTEDTYLKVIRGKTAALFGAACKVGG 188 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +I+ + + AL SYG LG+ FQ+ DD+LDY G ++GK+IG+DFR K +LP+I Sbjct: 189 VISNAEEKIIDALASYGDALGVCFQITDDLLDYNGSSADLGKSIGDDFRERKMSLPLIKV 248 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++ EK FWK TI G ++L A +M ++ AL DT A + +KAK S+ L Sbjct: 249 LKKSDVTEKEFWKRTIEKGDQQDDDLDFALKLMTKHNALKDTHNDAKFWAEKAKKSISIL 308 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S + L E+ DF + RL+ Sbjct: 309 PKSKLRNILTELPDFVVNRLS 329 >gi|254462754|ref|ZP_05076170.1| geranylgeranyl pyrophosphate synthase [Rhodobacterales bacterium HTCC2083] gi|206679343|gb|EDZ43830.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium HTCC2083] Length = 333 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 145/321 (45%), Positives = 208/321 (64%), Gaps = 1/321 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D+ VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y G Sbjct: 13 AMAAYLADDLNAVNVLIQQRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYDG 72 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F ++ Sbjct: 73 PYHVHLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLM 132 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +ET S L+ L+ + T+AEGE+ QL+ S++L TE YL V++ KTA LFSAA EV Sbjct: 133 VETGSMRVLDILANASATIAEGEVLQLTASQDLSTTEAIYLQVVRGKTAALFSAATEVGG 192 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IAG + +AL YG LGIAFQ+VDD+LD G+ +GKNIG+DFR K TLP+I A Sbjct: 193 VIAGADEAHVKALFDYGDALGIAFQIVDDLLDMSGDAGAIGKNIGDDFREKKLTLPLIKA 252 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + E+ FW+ TI G+ +L+ A ++ ++ AL DT A ++ +KA ++ L Sbjct: 253 IAKADAEERAFWERTIEKGRQEDGDLETAIALLHKHGALDDTRDEALAWAEKAVKAIDYL 312 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P ++ L ++ D+ + R+N Sbjct: 313 PAHPVREMLRDLADYVVARIN 333 >gi|66043965|ref|YP_233806.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae B728a] gi|289674837|ref|ZP_06495727.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae FF5] gi|63254672|gb|AAY35768.1| Trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae B728a] gi|330941237|gb|EGH44102.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. pisi str. 1704B] gi|330954228|gb|EGH54488.1| trans-hexaprenyltranstransferase [Pseudomonas syringae Cit 7] gi|330977523|gb|EGH77469.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 322 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 190/321 (59%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDVRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S E ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMEVMKILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCNAPQEQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + I G + E+L+ + AL T A Y +A L L Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PPSEYRDALVELSEFAVARTH 322 >gi|52425655|ref|YP_088792.1| IspA protein [Mannheimia succiniciproducens MBEL55E] gi|52307707|gb|AAU38207.1| IspA protein [Mannheimia succiniciproducens MBEL55E] Length = 358 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 128/320 (40%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM+KVN IL ++ SDV +I + Y+I SGGKR+RPM+ A L Y+ Sbjct: 38 IKTIQALVSDDMQKVNEEILAQLNSDVPLINQLGYYIIHSGGKRIRPMIANLAAKALNYQ 97 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + H+ A IEF+HTATLLHDDVVD+S +RRG A +GN SVLVGD++ +++F M Sbjct: 98 DNKHITCAAFIEFLHTATLLHDDVVDESDMRRGNPTANAEFGNAASVLVGDYMHTRSFQM 157 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S L+ +S +AEGE++QL ++ D TE++Y+ VI SKTA LF + + Sbjct: 158 MTELGSLRILQVMSAATNVIAEGEVQQLMNVRDPDTTEQNYMKVIYSKTARLFEVSTQTV 217 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A ++ + L++YG LG AFQLVDD+LDY +GKNIG+D GKPTLP++ Sbjct: 218 AILADAGAAIEEGLQNYGRYLGTAFQLVDDILDYSANAATLGKNIGDDLAEGKPTLPLLH 277 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G ++ ++ I G + + L + IM E+++L A QKA D+L Sbjct: 278 AMRHGNPQQAELIRNIILQGG-NRDALDEVLTIMHEHKSLDYAMEHAKQEAQKAVDALAP 336 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ +K++++ + + R Sbjct: 337 LPDNIYKRAMISLAYLSVDR 356 >gi|121602666|ref|YP_988702.1| polyprenyl synthetase [Bartonella bacilliformis KC583] gi|120614843|gb|ABM45444.1| polyprenyl synthetase [Bartonella bacilliformis KC583] Length = 338 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 168/322 (52%), Positives = 222/322 (68%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L +LT DME+ N LI+ I S++EMIP++ +LI SGGKRLRPM+TLA A M Y+ Sbjct: 17 LQPLINLTKDDMERANQLIISMIKSNIEMIPEICNHLISSGGKRLRPMITLAAAHMFGYQ 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA A+EF+HTATLLHDDVVD+S LRRGK AR++WGNQ SVLVGDFLL QAF + Sbjct: 77 GDEHIKLATAVEFMHTATLLHDDVVDESNLRRGKSTARMIWGNQASVLVGDFLLGQAFKI 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ +S EAL LS A +AEGE+ QL+ + N++ +YL +I +KTA LFSAA EV Sbjct: 137 MVDARSMEALAILSNAAAVIAEGEVMQLAAANNIENDISNYLKIINAKTAALFSAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG R AL+ YG +LG+AFQL+DD LDY G+ +GKNIG+DFR K T+PVI Sbjct: 197 PIIAGYGCEERSALRKYGTSLGLAFQLIDDALDYSGDAQHLGKNIGDDFREKKITMPVIF 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++ RG EK FWK T + S E A +M + + DT A YGQ A D+L Sbjct: 257 SYMRGNAVEKEFWKQTFKESNHSDEAFIHAQYLMEKYGCITDTIKHARIYGQHAIDALSS 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + DS K +L+EV+DFC+ R+N Sbjct: 317 IKDSPAKSALIEVIDFCIARVN 338 >gi|325981722|ref|YP_004294124.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212] gi|325531241|gb|ADZ25962.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212] Length = 322 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +DM V+ +I +++ S V +I V +Y+I SGGKRLRP L + +A Y Sbjct: 3 IEYIRSFIAQDMSIVDNVIREKLHSHVLLIRQVSEYIINSGGKRLRPALVILSAGAFGYS 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHTATLLHDDVVD+S LRR + A ++GN SVLVGDFL S+AF M Sbjct: 63 GKFHYNLAAVIEFIHTATLLHDDVVDESELRRNRETANALFGNAASVLVGDFLYSRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + ++ L+ T+AEGE+ QL ++ V+EE+YL VI+ KTA LF AA + Sbjct: 123 MVEVDNMRVMQVLADATNTIAEGEVLQLLNCRDPQVSEENYLQVIRFKTAKLFEAASRLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + A+ YGM+LG AFQLVDD+LDY G +++GKN+G+D GKPTLP+I Sbjct: 183 AILGNATSEEENAMAVYGMHLGTAFQLVDDMLDYSGNNHDIGKNLGDDLTEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT+ + N + I DG + + ++R+ AL + A + A ++ Sbjct: 243 AMRTGTQEQANIIRKAIEDG--GKDGFQPVLNVIRQTAALEYAKKCAEAEVTTAVAAIAT 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS KK L+++ F + R Sbjct: 301 LPDSENKKCLLQLASFAVTR 320 >gi|288960115|ref|YP_003450455.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510] gi|288912423|dbj|BAI73911.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510] Length = 342 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 160/320 (50%), Positives = 215/320 (67%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L +D+ VN +IL R+ S VEMIP + YLI +GGKRLRP+LTLA A + Y+ Sbjct: 21 LDDLTALVAEDLSAVNQIILDRMQSQVEMIPQLAGYLIAAGGKRLRPVLTLAAANLCGYQ 80 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H LLA +EFIH+ATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL S+AF M Sbjct: 81 GEHHRLLAAVVEFIHSATLLHDDVVDESDLRRGMASANAVFGNKASVLVGDFLFSRAFEM 140 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E +S + L LS + +AEGE+ QL + + + +E+ YL VIK KTA LF+AA V Sbjct: 141 MVEVQSLDVLRILSGASAIIAEGEVLQLRTTNDTETSEQAYLEVIKGKTAELFAAACRVG 200 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL YGMNLGIAFQLVDDVLDY ++GK +G+DFR GK TLPV+L Sbjct: 201 AVVANRPQAEELALYDYGMNLGIAFQLVDDVLDYSALQAKLGKTVGDDFREGKITLPVVL 260 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG E+ FW+ + D +L+ A +M + AL DT RA YG A+DSL Sbjct: 261 AFRRGNDEERAFWRRVMEDLDQKDGDLEHAQTLMARHNALKDTVERARHYGSIARDSLGL 320 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 D K++L+EV+DF + R Sbjct: 321 FADGPIKQALLEVIDFVIDR 340 >gi|289625167|ref|ZP_06458121.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651351|ref|ZP_06482694.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi str. 2250] gi|298485383|ref|ZP_07003473.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160081|gb|EFI01112.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330869163|gb|EGH03872.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330988777|gb|EGH86880.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 322 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 189/321 (58%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S E + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMEVMRILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + I G + E+L+ + AL T A Y +A L L Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDTL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PPSEYRDALVELSEFAVARTH 322 >gi|320540162|ref|ZP_08039817.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str. Tucson] gi|320029828|gb|EFW11852.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str. Tucson] Length = 333 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT +DM VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y Sbjct: 13 LEQITALTAQDMMAVNAAILEQLHSDVTLINQLCYYIISGGGKRIRPMIAVLAARALNYE 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 73 GNKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + KS L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 133 MTSLKSLRVLALMSEAVNVIAEGEVLQLMNVHDPDITEESYMQVIYSKTARLFEAAAQSS 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G + +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 193 AILSGANQAEEKALQDYGRYLGTAFQLIDDLLDYSANGSTLGKNTGDDLNEGKPTLPLLH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + +++ + I G L+ M++ +L T RA KA +L+ Sbjct: 253 AMHHGDEAQRSMIREAIEQGN-RRHLLEPVLQAMQQCASLEYTHNRAEEEANKAIAALQA 311 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + +QR Sbjct: 312 LPKSPYRDALEGLARLAVQR 331 >gi|86139019|ref|ZP_01057590.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193] gi|85824250|gb|EAQ44454.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193] Length = 332 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 144/322 (44%), Positives = 207/322 (64%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++L +ME VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y Sbjct: 11 ELLAATLSDEMEAVNTLIQTRMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAARLCGYE 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F + Sbjct: 71 GAHHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET S + L+ L+ + T+AEGE+ Q++ + NL E YL V++ KTA LFSAA +V Sbjct: 131 MVETGSLQVLDILANASATIAEGEVLQMTAASNLATDEAVYLQVVRGKTAALFSAATQVG 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IA + + L YG LGIAFQ+ DD+LDY+G+ GKNIG+DFR K TLPVI Sbjct: 191 GVIAAAPETQIKGLFDYGDALGIAFQIADDLLDYQGDAATTGKNIGDDFRERKLTLPVIK 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T E+ FW TI G+ +L++A +M + L T A + +KA ++L Sbjct: 251 AVAQATDEERAFWIRTIEKGQQQEGDLEQALALMAKYGTLEATRQDALLWAEKATEALSA 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD ++ L ++ ++ + RL+ Sbjct: 311 LPDHPIRQMLHDLAEYVVSRLH 332 >gi|56695234|ref|YP_165582.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3] gi|56676971|gb|AAV93637.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3] Length = 332 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 147/322 (45%), Positives = 213/322 (66%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +ML ++M VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y+ Sbjct: 11 EMLAATLSQEMAAVNALIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYQ 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F + Sbjct: 71 GEDHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET S L+ L+ A T+AEGE+ Q++ + +L E YL V++ KTA LFSAA EV Sbjct: 131 MVETGSLRVLDILANAAATIAEGEVLQMTAASDLRTDESVYLQVVRGKTAALFSAATEVG 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAGV + +AL YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI Sbjct: 191 GVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIK 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T E+ FW TI GK + +L++A +M + L T A+++ +KA+ +L Sbjct: 251 AVAQATDEERAFWVRTIEKGKQAEGDLEQALALMEKYGTLAATRADAHAWAEKARTALEL 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+ + L ++ D+ + RL+ Sbjct: 311 LPNHEIRTMLSDLADYVVARLS 332 >gi|213971072|ref|ZP_03399192.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato T1] gi|301384205|ref|ZP_07232623.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato Max13] gi|302060871|ref|ZP_07252412.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato K40] gi|302132864|ref|ZP_07258854.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924180|gb|EEB57755.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato T1] gi|331018359|gb|EGH98415.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 322 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 191/321 (59%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDIRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S E ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMEVMKILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCKASEAQTEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + I G + E+L+ + AL T A Y +A L L Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVENAGALDYTAQLARDYAARAIACLDAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PPSEYRDALIELSEFAVARTH 322 >gi|28868024|ref|NP_790643.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato str. DC3000] gi|28851260|gb|AAO54338.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato str. DC3000] gi|330878952|gb|EGH13101.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966393|gb|EGH66653.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 322 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 191/321 (59%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDIRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S E ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMEVMKILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCKASEAQTEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + I G + E+L+ + AL T A Y +A L L Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PPSEYRDALIELSEFAVARTH 322 >gi|308051079|ref|YP_003914645.1| trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799] gi|307633269|gb|ADN77571.1| Trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799] Length = 322 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 136/322 (42%), Positives = 195/322 (60%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + DL DM+ VN +I ++ SDV +I + Y+I GGKR+RP+L + A ++Y+ Sbjct: 3 LNAIRDLADHDMKMVNQMIYDQLHSDVVLINQLSFYIINGGGKRMRPLLAVLAARAVDYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+HV LA IEFIHTATLLHDDVVD+S +RRG+ A ++GNQ SVLVGDFL +++F M Sbjct: 63 GDDHVKLAAIIEFIHTATLLHDDVVDESTMRRGRETANALFGNQASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E K LE L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++ Sbjct: 123 MTELKRPRVLEDLADATNVLAEGEVLQLMNCNDPNTTEESYMQVIYCKTARLFEAATHLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IA V AL YG LG AFQLVDDVLDY + E+GKN+G+D GKPTLP+I Sbjct: 183 AVIADQPTEVCDALSDYGRYLGTAFQLVDDVLDYTADAEELGKNLGDDLAEGKPTLPLIH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + +S I +G + + + + + +L T RA KA +L Sbjct: 243 AIAHAPEAQSQQIRSAIENGGC--DEVDEVVATLNQVGSLEYTMQRAVEEADKAIAALDV 300 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP++ ++++L + ++R N Sbjct: 301 LPETPFREALASLARIAVERRN 322 >gi|109900040|ref|YP_663295.1| trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c] gi|109702321|gb|ABG42241.1| Trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c] Length = 323 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 133/321 (41%), Positives = 196/321 (61%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM VN LI K++ SDV +I + Y++ SGGKRLRP+LT+ A L + Sbjct: 3 LDHILSLAEPDMLAVNQLIQKQVNSDVSLINQLGFYIVNSGGKRLRPLLTVLAARALNIQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + H LA IEFIHTATLLHDDVVD+S +RRG+ A V+GNQ SVLVGDFL +++F M Sbjct: 63 TEQHHTLAAIIEFIHTATLLHDDVVDESTMRRGRETANEVFGNQASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S ++ LS +AEGE+ QL + D TEE Y+ VI SKTA LF AA ++ Sbjct: 123 MVTLDSMRVMQILSDATNVIAEGEVLQLMNCNDPDTTEESYMEVIYSKTARLFEAATLLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ ++ A++ YG LG AFQLVDD++DY + EMGKN+G+D GKPTLP++ Sbjct: 183 GVLTKQSEAIENAMQDYGKYLGTAFQLVDDIMDYASDSEEMGKNMGDDLAEGKPTLPLLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G +++ + I G ++NL M + AL T+ +A Q+A D+L Sbjct: 243 AMWHGNEQQTAIIREAIETGN-GMDNLTPILETMEQTGALTYTKQQALKASQQAIDALSP 301 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 + +S +K++L+ + ++R+ Sbjct: 302 IEESVYKEALIGLAHISVERV 322 >gi|302188811|ref|ZP_07265484.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. syringae 642] Length = 322 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 127/321 (39%), Positives = 191/321 (59%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDVRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S + ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMDVMKILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCNASEAQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + I G + E+L+ + AL T A Y +A L L Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PPSEYRDALVELSEFAVARTH 322 >gi|320326220|gb|EFW82274.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea str. B076] gi|320330645|gb|EFW86622.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330881372|gb|EGH15521.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330891602|gb|EGH24263.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. mori str. 301020] Length = 322 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 189/321 (58%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S E + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMEVMRILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + I G + E+L+ + AL T A Y +A L L Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PPSEYRDALVELSEFAVARTH 322 >gi|90411954|ref|ZP_01219962.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum 3TCK] gi|90327212|gb|EAS43584.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum 3TCK] Length = 323 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM +V+ I ++ SDV +I + Y++ GGKRLRPML + A L Y+G Sbjct: 4 KAIQALTANDMAEVDAKIQAQLNSDVALINQLGFYIVSGGGKRLRPMLVVLAARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H+ A +EFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 64 DKHITAAAFVEFIHTATLLHDDVVDESDMRRGKETANAAFGNAASVLVGDYIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +S + L+ +S +AEGE+ QL + + TE++Y+ VI SKTA LF AA ++S+ Sbjct: 124 TSLRSLKILDVMSEATNVIAEGEVLQLMNCNDPNTTEDNYMQVIYSKTARLFEAATQISA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +I V AL+ YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A Sbjct: 184 IITESSTEVEVALQDYGRYLGTAFQLIDDVLDYVADGKEMGKNVGDDLSEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G + + + I ++ L MRE +L T+ RA KA +L + Sbjct: 244 MHNGNEAQSAMIREAIEKSN-GMDKLNDILAAMREAGSLEYTQQRAEEEADKAIAALAPI 302 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 +S +K++L+++ ++R Sbjct: 303 AESDYKEALIQLAHLAVKRT 322 >gi|325577651|ref|ZP_08147926.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC 33392] gi|325160396|gb|EGC72522.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC 33392] Length = 331 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M ++ LT DM+KVN IL +I SDV M+ + Y++ GGKR+RP++ + A L Y Sbjct: 11 MHAIQALTDADMQKVNQAILAQINSDVPMVNQLGFYIVQGGGKRIRPLIAVLAARALGYE 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 71 SDKVATCATFVEFIHTASLLHDDVVDESDMRRGRATANSAFGNAASVLVGDFIYTRAFQL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + +S + L ++ LAEGE++QL + D TEE Y+ VI SKTA LF A + Sbjct: 131 VAQLQSLDILRIMADATNVLAEGEVQQLMNVNDPDTTEESYMRVIYSKTARLFEVAAQSV 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + S+ A + YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ Sbjct: 191 AIVAGAEKSIETAFQEYGRYLGTAFQLVDDVLDYSANAAALGKNVGDDLAEGKPTLPLLH 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G ++ + I G + + + IM E+++L RA QKA D+++ Sbjct: 251 AMRHGNPQQAALIREAIEQGG-KRDAIDEVLAIMAEHKSLDYAMDRAKQEAQKAIDAIQI 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 310 LPESEYKQALISLAYLSVSR 329 >gi|167622844|ref|YP_001673138.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] gi|167352866|gb|ABZ75479.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] Length = 323 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 143/322 (44%), Positives = 196/322 (60%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + LT DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+ Sbjct: 3 LNAIRQLTDSDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSILAARAIDYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GDSHLKLAAIIEFIHTASLLHDDVVDESMLRRGRKTANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E K + LE L+ LAEGE+ QL + D TE+ Y+ VI KTA LF AA ++ Sbjct: 123 MTELKCLDVLEILADATNVLAEGEVLQLMNCNDPDTTEDSYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L+A V+ AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 183 GLLADSPIEVQTALAEYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G EK + I G E+++ + AL TE RA +KA +L Sbjct: 243 AMANGNDTEKALIREAIEKGD-GTEHIEVILAALNNCGALKYTEQRAIEESEKAIAALAI 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 +P+S +K +L+ + QR N Sbjct: 302 IPESDYKTALISLAKLATQRSN 323 >gi|300115547|ref|YP_003762122.1| trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113] gi|299541484|gb|ADJ29801.1| Trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113] Length = 322 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 135/321 (42%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ DL DM V+ LI +R+ SDV +I + Y+I SGGKRLRPM+ L +A +Y+ Sbjct: 3 IQSAYDLVADDMRSVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFDYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD S LRRG+ A +WG++ SVLVGDFL S+AF M Sbjct: 63 GSYHIDIAAIIEFIHTATLLHDDVVDSSELRRGRKTANNIWGSEASVLVGDFLYSRAFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S +E L+ T+AEGE+ QL D TEE YL +I+SKTA LF AA ++ Sbjct: 123 MVGVDSMRVMEILARTTNTIAEGEVMQLLNCHEPDTTEECYLEIIRSKTAKLFEAATQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ ++ + + +YGM+LG AFQL DDVLDY ++GKNIG+D GKPTLP+I Sbjct: 183 AVLCHRSSAEEKLMATYGMHLGTAFQLTDDVLDYSAFSEDLGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A +GT ++ I G ENL + + + A+ T A +A +++ Sbjct: 243 AMSKGTAPHVKVIRNAIESG--GRENLAEVIEAIESSGAIAYTAEAARREADRAMQAVKS 300 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 +P S ++++L+ + F R Sbjct: 301 IPPSPYQEALLNLAKFAAYRT 321 >gi|170717395|ref|YP_001783470.1| polyprenyl synthetase [Haemophilus somnus 2336] gi|168825524|gb|ACA30895.1| Polyprenyl synthetase [Haemophilus somnus 2336] Length = 330 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM+KVN IL ++ SDV +I + Y++ SGGKR+RPM+ L A L Y+ Sbjct: 10 IHAIQSLIKTDMDKVNATILAQLNSDVALINQLGYYIVQSGGKRIRPMIALLAARALNYQ 69 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD + A +EFIHTATLLHDDVVD+S +RRG A +GN SVLVGDF+ ++AF + Sbjct: 70 GDEPITCAAFVEFIHTATLLHDDVVDESDMRRGNPTANAEFGNAASVLVGDFIYTRAFQL 129 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE++QL + + +E++Y+ VI SKTA LF A + + Sbjct: 130 MTKLNSLRILQIMSDATNIIAEGEVQQLMNVNDPETSEDNYMKVIYSKTARLFEVATQCA 189 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ A AL+ YG LG AFQLVDDVLDY +GKNIG+D GKPTLP++ Sbjct: 190 AITAQSNAEQEIALQHYGRYLGTAFQLVDDVLDYSANAATLGKNIGDDLAEGKPTLPLLH 249 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT ++ + I G + L IM E ++L +A QKA DS+ C Sbjct: 250 AMRNGTPQQSALIREAIEQGG-KRDFLDDVLAIMTEQKSLDYAMSKAKEEAQKAVDSISC 308 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ +K++L+ + ++R Sbjct: 309 LPENQYKQALISLAYLSVER 328 >gi|126728318|ref|ZP_01744134.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Sagittula stellata E-37] gi|126711283|gb|EBA10333.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Sagittula stellata E-37] Length = 325 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 151/326 (46%), Positives = 210/326 (64%), Gaps = 5/326 (1%) Query: 1 MKMLEDLTLK---DMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MK E L +M VN LI +R+ S IP+V +L+ +GGKRLRPMLTLA+A + Sbjct: 1 MKPHERLAADLVAEMAAVNDLIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLTLASAKL 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 Y G HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L ++ Sbjct: 61 CGYDGPYHVHLAATVEFIHTATLLHDDVVDESERRRGRPTANLLWDNKSSVLVGDYLFAR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 +F ++ ET + L LS A T+AEGE+ QL+ +++L TE+ YL V++ KTA LFSAA Sbjct: 121 SFQLMTETGNLRVLRILSDAAATIAEGEVLQLTAAQDLSTTEDIYLQVVRGKTAALFSAA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 EV +IAG +AL YG LGIAFQ+VDD+LDY G GKN+G+DFR K TL Sbjct: 181 TEVGGVIAGRPEEDVRALFDYGDALGIAFQIVDDLLDYWGGDAT-GKNVGDDFRERKLTL 239 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 P+I AF + EK FWK I G +L++A ++ + AL +T A ++ ++AK Sbjct: 240 PLIKAFAKADDAEKAFWKRVIEKGDQREGDLEEALRLLERHGALEETRQEALAWAERAKT 299 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 +++ LP S + L+E+ D+ + R+N Sbjct: 300 AMQKLPSSGLRDLLIELSDYVVSRVN 325 >gi|23014219|ref|ZP_00054047.1| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum magnetotacticum MS-1] Length = 339 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 149/318 (46%), Positives = 221/318 (69%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L L D+EKVN I+ R+ S VE+IP + ++I +GGKRLRP+LTLA+A + + G+ Sbjct: 20 ALVALVKDDLEKVNRAIVDRMHSPVELIPQLAGHIIAAGGKRLRPVLTLASAKLAGHTGE 79 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 H+ LA +EFIHTATLLHDDVVD+S LRRG+ +A ++GN+ SVLVGDFL S++F +++ Sbjct: 80 RHIKLAACVEFIHTATLLHDDVVDESELRRGQASANALFGNKPSVLVGDFLFSRSFELMV 139 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E S L LS + +AEGE+ QL + + + +E+ YL VI+SKTA LF+AA + ++ Sbjct: 140 EDGSLSVLAILSHASSVIAEGEVLQLITANDTETSEDSYLEVIRSKTAALFAAACRIGAV 199 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +A +AL+SYG+NLGIAFQL+DDVLDY + +GK +G+DFR GK TLPVILAF Sbjct: 200 VADRPKVEEEALESYGLNLGIAFQLIDDVLDYSAKQAVLGKTVGDDFREGKITLPVILAF 259 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 +RG E+ FW+ + + + ++ +A +M ++ +L T RA YG+ A+D+L P Sbjct: 260 RRGDDEERAFWRRCLEELDQADNDIGRAIKLMEKHGSLAATIARARHYGEIARDALGIFP 319 Query: 303 DSSWKKSLMEVVDFCLQR 320 DS+ K+++++V+DFC+ R Sbjct: 320 DSAVKQAMIDVIDFCIDR 337 >gi|71735497|ref|YP_273004.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556050|gb|AAZ35261.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 322 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 189/321 (58%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S E + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMEVMRILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + I G + E+L+ + AL T A Y +A L L Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRDAVESAGALDYTAQLARDYAARAIACLDAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PPSEYRDALVELSEFAVARTH 322 >gi|254785128|ref|YP_003072556.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901] gi|237684423|gb|ACR11687.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901] Length = 320 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 138/320 (43%), Positives = 201/320 (62%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + D + VN LI+ ++ SDV+++ ++ +Y++ +GGKRLRP+L L A L Y+ Sbjct: 1 MQSFHKVVEADFDAVNRLIVAKLHSDVDLVENIGQYIVDAGGKRLRPLLVLLAAKALGYQ 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ LA IEFIHTATLLHDDVVD SALRRG+ +A WGN SVLVGDFL S+AF M Sbjct: 61 GQQHIELAAIIEFIHTATLLHDDVVDVSALRRGRPSANAQWGNAPSVLVGDFLYSRAFQM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + + +S ++EGE++QL +K+ DVTE++Y+ VI KTA LF AA E Sbjct: 121 MVGVGNIDVMAIMSDTTNVISEGEVQQLVNAKDPDVTEQNYMAVIHKKTAALFEAACETG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IAGV + R ++K G +LG+AFQLVDD LDY G +GKN+G+D GKPTLP+I Sbjct: 181 AVIAGVSSEQRASIKQIGYHLGVAFQLVDDALDYHGNTESLGKNVGDDLAEGKPTLPLIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +GT E ++ I G V+ L++ I+RE L T A + +A + Sbjct: 241 TMAQGTPEEAALIRTAIQQG--GVDKLQQIISIVRERGGLEYTMRCANRHADEALTLIDQ 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L ++ F + R Sbjct: 299 LPTSPFQSALADLTRFSVSR 318 >gi|332289056|ref|YP_004419908.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179] gi|330431952|gb|AEC17011.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179] Length = 323 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 200/320 (62%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L+ KDM+ VN +I +++ SDV +I + Y+I GGKR+RP++ + A L Y+ Sbjct: 3 LNEIQALSAKDMQAVNAMISQQLQSDVALINQLSFYIINGGGKRIRPLIAVLVANALNYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ A IEFIHTATLLHDDVVD+S LRRGK A ++GN SVLVGDF+ ++AF + Sbjct: 63 GDRHITCATFIEFIHTATLLHDDVVDESTLRRGKDTANAIFGNAASVLVGDFIYTRAFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S ++ +S +A GE+ QL + D TE+ Y+ VI SKTA LF A E S Sbjct: 123 MARLGSLPVMQVMSDAVNVIAAGEVLQLMNCNDPDTTEQSYMQVIYSKTARLFEVAAECS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L++ QA+K YG LG AFQL+DDVLDY +V+++GKN+G+D GKPTLP++ Sbjct: 183 ALLSEATEQQVQAMKLYGRYLGTAFQLIDDVLDYCADVDKLGKNLGDDLEEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q ++ E+ +S I G + L + +M + ++L T +A QKA DSL Sbjct: 243 AMQHASEDERQLIRSIIEHGH-GRKYLAEVQAMMDKYQSLTYTIEKAKQEAQKAIDSLSV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 + D+ +K++L+ + ++R Sbjct: 302 IDDNPYKEALISLAKISVER 321 >gi|301154821|emb|CBW14284.1| octaprenyl diphosphate synthase [Haemophilus parainfluenzae T3T1] Length = 331 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M ++ LT DM+KVN IL +I SDV M+ + Y++ GGKR+RP++ + A L Y Sbjct: 11 MHAIQALTDADMQKVNQAILAQINSDVPMVNQLGFYIVQGGGKRIRPLIAVLAARALGYE 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 71 SDKVATCATFVEFIHTASLLHDDVVDESDMRRGRATANSAFGNAASVLVGDFIYTRAFQL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + +S + L ++ LAEGE++QL + D TEE Y+ VI SKTA LF A + Sbjct: 131 VAQLQSLDILRIMADATNVLAEGEVQQLMNVNDPDTTEESYMRVIYSKTARLFEVAAQSV 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + S+ A + YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ Sbjct: 191 AIVAGAEKSIETAFQEYGRYLGTAFQLVDDVLDYSANAAALGKNVGDDLAEGKPTLPLLH 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G ++ + I G + + + IM E+++L RA QKA D+++ Sbjct: 251 AMRHGNPQQAALIREAIEQGG-KRDAIDEVLAIMAEHKSLDYAMDRAKQEAQKAVDAIQI 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 310 LPESEYKQALISLAYLSVSR 329 >gi|325277088|ref|ZP_08142742.1| polyprenyl synthetase [Pseudomonas sp. TJI-51] gi|324097770|gb|EGB95962.1| polyprenyl synthetase [Pseudomonas sp. TJI-51] Length = 322 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 130/321 (40%), Positives = 198/321 (61%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QTFYRPVADDFSAVDEIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTTEEVYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +A ++ R+AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I Sbjct: 184 ALAEATDAQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G + E+L++ + + E+ AL T A Y ++A L L Sbjct: 244 MREGTAEQAALVRQAIQKGGL--EDLEQIRVAVEESGALQYTAELARDYVKRAIACLEVL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PASEYRDALVELSEFAVARTH 322 >gi|294139556|ref|YP_003555534.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12] gi|293326025|dbj|BAJ00756.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12] Length = 323 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 136/320 (42%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI ++ SDV +I + Y+I GGKR+RP+LT+ A ++Y+ Sbjct: 3 LNAIRQLADSDMQDVNKLIYSQLESDVALINQLGFYIINGGGKRMRPLLTILAARAIDYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GEAHLKLAAIIEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S + LE L+ LAEGE+ QL + D +EE+Y+ VI KTA LF AA ++ Sbjct: 123 MTELGSMKVLEMLADATNVLAEGEVLQLMNCNDPDTSEENYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A ++ AL YG LG AFQL DD+LDY E+GKNIG+D GKPTLP+I Sbjct: 183 GVLADSPIEIQTALADYGKYLGTAFQLTDDLLDYTANTEELGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT++E+ + I G + + + + + AL T RA KA ++L C Sbjct: 243 AIANGTEKEQALIRKAIELGD-GTQYIDEILTALNKCGALEYTLNRALEESDKAIEALSC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDS +K++L+ + ++R Sbjct: 302 IPDSDYKQALISLAKIAVER 321 >gi|254491038|ref|ZP_05104219.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010] gi|224463551|gb|EEF79819.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010] Length = 322 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 138/320 (43%), Positives = 198/320 (61%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + L DM V+ LI +R+ SDV +I + Y+I SGGKRLRP + + +A Y Sbjct: 3 IQSIYSLIEDDMTAVDNLIQQRLQSDVALINQLGFYIINSGGKRLRPAIAILSAKACGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA IEFIHTATLLHDDVVD+SA+RRGK A +WGN+ SVLVGDFL +++F M Sbjct: 63 GDKHINLATIIEFIHTATLLHDDVVDNSAMRRGKETANNLWGNEASVLVGDFLYTRSFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S + LS +AEGE+ QL + D TE YL VI KTA LF AA ++ Sbjct: 123 MVEMDSMRLMRILSSTTNIIAEGEVLQLLNCHDADTTEARYLEVIHHKTAKLFEAAGQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I+ + + QA+ Y M+LG AFQLVDD+LDY +GKNIG+D GKPTLP+I Sbjct: 183 AVISRSADDIEQAMARYAMHLGSAFQLVDDLLDYSQSSETIGKNIGDDLAEGKPTLPLIH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A ++GT ++ + I G+ + + + I+ E A+ T + A AK +L Sbjct: 243 AMRQGTDQQAAIIREAIEQGQ--RDRIDEIITIINETGAIDYTAHAAAQEVAHAKQALAT 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ +K++L+ + DF + R Sbjct: 301 LPETDYKQALLSLADFSISR 320 >gi|56459585|ref|YP_154866.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] gi|56178595|gb|AAV81317.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] Length = 324 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 134/321 (41%), Positives = 191/321 (59%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + L DM VN LI +++ SDV +I + Y++ SGGKRLRP+L + L Y Sbjct: 4 MQSINALAKDDMLGVNALIGEQLQSDVALINQLGLYIVNSGGKRLRPLLAILACRALGYE 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H LA IEFIHTATLLHDDVVD+S LRRG+ A V+GN+ SVLVGDFL ++AF + Sbjct: 64 GNDHRKLATIIEFIHTATLLHDDVVDESELRRGRKTANAVFGNEASVLVGDFLYTRAFQL 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S L L+ ++EGE+ QL + D +E Y +VI KTA LF AA E++ Sbjct: 124 MVDLDSLRILRILADATNIISEGEVLQLMNCNDPDTSEASYFNVIYGKTAKLFEAATELA 183 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ V Q L YG LG AFQLVDD++DY + MGKN G+D GKPTLP++ Sbjct: 184 GVLTAQDEKVTQQLADYGRYLGTAFQLVDDLMDYTADSESMGKNAGDDLAEGKPTLPLLY 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + E+ + I G E+L+ M AL T +A ++A++SL Sbjct: 244 AMWHGNEIEQKLIREAIEQGD-GREHLQTVLTAMERTGALQYTRDKALEAAEQARESLSE 302 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LPDS +K++L+ + + R+ Sbjct: 303 LPDSDYKQALLTLTHLAVDRV 323 >gi|88859033|ref|ZP_01133674.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas tunicata D2] gi|88819259|gb|EAR29073.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas tunicata D2] Length = 323 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 137/322 (42%), Positives = 199/322 (61%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ LT DM++VN LI K++ SDV ++ + Y++ SGGKR+RPML++ +A L Y Sbjct: 3 IKSIQALTDNDMQRVNQLIYKQLQSDVALVNQLGLYIVSSGGKRVRPMLSILSAKALGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA +EFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ ++AF + Sbjct: 63 GDAHITLAAIVEFIHTATLLHDDVVDESDLRRGNATANAEFGNAASVLVGDFIYTRAFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + ++ L+ +AEGE+ QL + D TE+ Y+ VI SKTA LF AA +++ Sbjct: 123 MVGLEEMRVMKILADATNVIAEGEVLQLMNCNDPDTTEQSYMQVIYSKTAKLFEAATQLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I + + LK YGM+LG AFQLVDDVLDY + E+GK++G+D GKPTLP+I Sbjct: 183 AVITRKDAATEEQLKLYGMHLGTAFQLVDDVLDYSADQAELGKSLGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q GTK + + I G L + + AL T +A Q+A L Sbjct: 243 AMQHGTKEQVALIRQVIEQGN-GRAFLDDVLKALADTDALNFTLNKAKEESQRAIACLAL 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS +K++L+ + + R + Sbjct: 302 LPDSEYKEALIGLARLAVDRTH 323 >gi|220924250|ref|YP_002499552.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060] gi|219948857|gb|ACL59249.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060] Length = 345 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 177/326 (54%), Positives = 227/326 (69%), Gaps = 6/326 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L ME+VN +IL R SDV MIP+V +LI SGGKRLRP+LTLATA + YR Sbjct: 18 LNDLVALVETGMERVNAMILSRTGSDVAMIPEVANHLIASGGKRLRPILTLATAQLCGYR 77 Query: 61 G-----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 D V LA ++EF+HTATLLHDDVVD+S +RRG+VAAR+ WGNQ SVLVGDFLL Sbjct: 78 SAEGGRDGDVKLAASVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNQASVLVGDFLLG 137 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 QAF M++E S AL+ LS A +AEGE+ QL +KN + TE++YL VI++KTA LF+A Sbjct: 138 QAFKMMVEVGSLRALDILSSAAAVIAEGEVMQLGAAKNTETTEDEYLAVIRAKTAELFAA 197 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A EV ++A S A +SYGMNLGIAFQLVDD LDY G +GKN+G+DFR GK T Sbjct: 198 ACEVGPVLAERPKSEAAACRSYGMNLGIAFQLVDDALDYGGTSAALGKNVGDDFREGKIT 257 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKA 294 LP++L+F+RG E+ FW+ T+ G+I +L A IMR +RAL DT RA YG A Sbjct: 258 LPIVLSFRRGNAEERAFWRRTLEQGEIDESRDLDTAIGIMRRHRALEDTIERARHYGAIA 317 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320 +D+L PD+ K++L++ VDFC+ R Sbjct: 318 RDALALFPDAPMKRALLQAVDFCISR 343 >gi|257487512|ref|ZP_05641553.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 322 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 188/321 (58%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S E + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMEVMRILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + I G + E+L+ + AL T A Y +A L L Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ L+E+ +F + R + Sbjct: 302 PPSEYRDVLVELSEFAVARTH 322 >gi|328543228|ref|YP_004303337.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase [polymorphum gilvum SL003B-26A1] gi|326412974|gb|ADZ70037.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase [Polymorphum gilvum SL003B-26A1] Length = 336 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 161/322 (50%), Positives = 223/322 (69%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DL +DME VN LIL + S+V++IP++ K+LI SGGKRLRPMLTLA A M Y+ Sbjct: 15 IQSLVDLVARDMEAVNRLILSKAGSNVDLIPEIAKHLIDSGGKRLRPMLTLALADMFGYQ 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV L+ ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M Sbjct: 75 GSGHVTLSASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKM 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL L+ + +AEGE+ QL +KNL +E Y+ VI++KTA LF+AA EV Sbjct: 135 MVDVGSLEALRVLAEASAVIAEGEVMQLGAAKNLATSEASYMKVIEAKTAALFAAAAEVG 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG A + YGM LG+AFQLVDD LDY G ++GK +G+DFR GK TLPV++ Sbjct: 195 PIIAGQSAETCAAARRYGMELGLAFQLVDDALDYGGSSADLGKQVGDDFREGKITLPVVV 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A +RG+ ++ FW+ + I +L+ A ++R + A+ +T RA YG A ++L Sbjct: 255 AVERGSDEDRAFWRRCLETDGIRDGDLEHAIGLLRRHGAIEETIARARHYGASAIEALAA 314 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP + +L E V+FC+ R+N Sbjct: 315 LPAGRHRDALHEAVEFCISRVN 336 >gi|119944297|ref|YP_941977.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37] gi|119862901|gb|ABM02378.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37] Length = 331 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 129/322 (40%), Positives = 194/322 (60%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ ++ +M +VN LI +++ SDV +I + Y+I SGGKR+RP++T+ A L Sbjct: 11 IKTIQRISATEMNQVNKLITEQLSSDVALINQLGFYIINSGGKRIRPLITVLAAKALGIH 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 N LA IEFIHTATLLHDDVVDDS LRRGK A V+G+ SVLVGDFL +++F M Sbjct: 71 DQNTTKLAAIIEFIHTATLLHDDVVDDSDLRRGKKTANAVFGSAASVLVGDFLYTRSFQM 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + ++ + ++ LS +AEGE+ QL + D TE+ Y+ +I KTA LF AA ++ Sbjct: 131 MTQLRNLKVMDILSSATNIIAEGEVLQLMNCNDPDTTEKKYMDIIYFKTAKLFEAATQLV 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + AL +YG LG AFQL DDV+DY + +EMGKN G+D GKPTLP++ Sbjct: 191 AVLGEQSEEIETALLNYGKYLGTAFQLTDDVMDYNSDASEMGKNTGDDLAEGKPTLPLLY 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G K++ K I G +++ + + + AL + RA KA +L Sbjct: 251 AIQHGNKKQATLIKEAIKKGN-GMDHFDEIMQALHDTNALEYAKKRALEEADKAIKALVI 309 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 +PDS +K++L+ + R + Sbjct: 310 IPDSEYKQALISLAHIAADRKS 331 >gi|307824936|ref|ZP_07655158.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96] gi|307733983|gb|EFO04838.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96] Length = 336 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 149/317 (47%), Positives = 202/317 (63%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ LT + + V+ LI+ + SDV +I + Y++ SGGKRLRPML L A L DN Sbjct: 20 IKKLTTAEAKAVDQLIINELSSDVVLINQMGHYIVGSGGKRLRPMLLLLAAKALGGANDN 79 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+L+A IEFIHTATLLHDDVVDDS LRRGK +A VWGN S+LVGD+L S AF M++ Sbjct: 80 HLLMAAVIEFIHTATLLHDDVVDDSDLRRGKESANAVWGNAASILVGDYLYSSAFEMMVR 139 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 T + +E LS +AEGE+ QL N + TE+ YL VI KTA+LFSAA +++++I Sbjct: 140 TGNMRVMEILSKTTTAIAEGEVLQLLNCNNPETTEQKYLEVIARKTAILFSAATKLAAVI 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG Q L YG +LGIAFQL+DD LDY+ +E+GKN+G+D GKPTLP+I A Q Sbjct: 200 AGASTETEQGLSLYGQHLGIAFQLIDDALDYKASKDELGKNLGDDLAEGKPTLPLIYAIQ 259 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G++ E I +G V + + I++ +A+ TE RA QKA +L LPD Sbjct: 260 NGSESEAKIIIDAIKNGDRDV--FNEVYAIVQSTKAIDYTEQRADEEAQKAISALSVLPD 317 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L + F +QR Sbjct: 318 SEYKQALTLLAMFSVQR 334 >gi|171059952|ref|YP_001792301.1| polyprenyl synthetase [Leptothrix cholodnii SP-6] gi|170777397|gb|ACB35536.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6] Length = 313 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 128/314 (40%), Positives = 193/314 (61%), Gaps = 2/314 (0%) Query: 9 LKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLA 68 +M +V+ +I +R+ S+V +I + Y++ +GGKR+RP+L L A L++ G +A Sbjct: 2 AAEMAQVDAVIHRRLASEVALINQISHYIVSAGGKRIRPLLVLLFARALDFDGPERFEMA 61 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M++ Sbjct: 62 ATVEFIHTATLLHDDVVDESDLRRGRKTANAIFGNAASVLVGDFLYSRAFQMMVSVNRLR 121 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 L+ L+ +AEGE+ QL + D++ E YL VI+ KTA LF A+ +++AGV Sbjct: 122 VLDVLADATNVIAEGEVLQLLNMHDPDISIEAYLRVIRYKTAKLFEASARTGAVLAGVSA 181 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + + SYG LG AFQL+DD+LDY G ++GKN+G+D R GKPT+P++LA Q G+ Sbjct: 182 PLEDSCASYGRCLGTAFQLIDDLLDYEGATAQLGKNVGDDLREGKPTMPLLLAMQHGSST 241 Query: 249 EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKK 308 +++ + I G+ VE L + I+R AL T A KA+ L LP S +K+ Sbjct: 242 QRDLIRHAIEHGE--VERLPEIIEIVRSTGALEATRQAARDEANKARAHLSSLPSSQFKE 299 Query: 309 SLMEVVDFCLQRLN 322 +L+ + ++R + Sbjct: 300 ALLYLCAQSVERSS 313 >gi|89093572|ref|ZP_01166520.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92] gi|89082262|gb|EAR61486.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92] Length = 322 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 139/320 (43%), Positives = 199/320 (62%), Gaps = 2/320 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L E VN I+ + S+V ++ + Y++ SGGKRLRP+L L A Y+GD Sbjct: 5 QLNPAIEPQFEAVNDYIINHLGSNVPLVEKIGHYIVESGGKRLRPLLVLLAANAAGYKGD 64 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 HV LA IEFIHTATLLHDDVVD+S LRRGK A WGN SVLVGDFL S+AF +++ Sbjct: 65 KHVPLAAIIEFIHTATLLHDDVVDNSDLRRGKDTANAKWGNAPSVLVGDFLYSRAFQIMV 124 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E S + +E +S +AEGE+ QL +KN D TEE Y+ VI KTA+LF AA E ++ Sbjct: 125 EIGSMQIMEVISNATNVIAEGEVLQLLNTKNPDTTEEAYMQVILGKTAMLFEAATEAGAI 184 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +A R+ L+ YG++LG AFQL+DDV+DY EMGKN+G+D GK TLP+I A Sbjct: 185 LADATAEEREGLRLYGLHLGTAFQLIDDVMDYLSTAEEMGKNVGDDLAEGKATLPLIHAM 244 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + G + ++ + I G + ++L+ I++E A+ T+ +A KA +L L Sbjct: 245 RAGNEEQRLLVRQAIRKGGL--DDLQPIMDIVKETGAIEYTQQKAQEEADKAIAALSALS 302 Query: 303 DSSWKKSLMEVVDFCLQRLN 322 DSS+K++L+++ + ++R + Sbjct: 303 DSSFKETLVQLANMAVKRKS 322 >gi|163745677|ref|ZP_02153037.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45] gi|161382495|gb|EDQ06904.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45] Length = 334 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 150/321 (46%), Positives = 205/321 (63%), Gaps = 1/321 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + DM+ V+ LI +R+ S IP+V +L+ +GGKRLRPMLTLA A M Y G Sbjct: 14 QMAAYLADDMQAVSALIRERMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYGG 73 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W NQ+SVLVGD+L +++F ++ Sbjct: 74 PYHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNQSSVLVGDYLFARSFQLM 133 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 E S + LS A T+AEGE+ QL+ ++NL E YL V++ KTA LFSAA EV Sbjct: 134 TEPGSMPVMRILSNAAATIAEGEVLQLTAAQNLATDEAVYLQVVRGKTAALFSAATEVGG 193 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IAG +AL YG LGIAFQ+VDD+LDY+G+ GKN+G+DFR K TLPVI A Sbjct: 194 VIAGASTDQVKALYDYGDALGIAFQIVDDLLDYQGDTGATGKNVGDDFRERKLTLPVIKA 253 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + E+ FW TI GK +L +A I+ ++ L T+ A+ + +KAK +L L Sbjct: 254 VAKADAEERAFWVRTIEKGKQEDGDLDQALSILNKHATLAATQRDAHGWAEKAKAALAPL 313 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 PD K L+++ D+ + R++ Sbjct: 314 PDHDLKDMLIDLADYVVSRIS 334 >gi|24375152|ref|NP_719195.1| octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1] gi|24349926|gb|AAN56639.1|AE015800_12 octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1] Length = 323 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 139/320 (43%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+ Sbjct: 3 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVDYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S L L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++ Sbjct: 123 MTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG AL YG LG AFQL DD+LDY + +E+GKNIG+D GKPTLP+I Sbjct: 183 AVLAGASPEQETALGDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT+ EK + I G ++K + AL T+ +A KA +L Sbjct: 243 AIAHGTEEEKQLIRQAIEQGD-GTHAIEKIVAALHHCGALNYTQQKAIEESNKAIAALSV 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +K +L+ + + R Sbjct: 302 LPDSDFKTALISLAKISVDR 321 >gi|46143904|ref|ZP_00133901.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209449|ref|YP_001054674.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae L20] gi|307258100|ref|ZP_07539852.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|126098241|gb|ABN75069.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306863463|gb|EFM95394.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 331 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 135/324 (41%), Positives = 204/324 (62%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AF----QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A ++G + + + +S I +G E + IM E+++L RA QKA D Sbjct: 247 AMHTAQEKGNQAQVDIIRSAIENGG-EREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVD 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LP+S +K++L+ + + R Sbjct: 306 ALAVLPESEYKQALISLAYLSVDR 329 >gi|91794278|ref|YP_563929.1| trans-hexaprenyltranstransferase [Shewanella denitrificans OS217] gi|91716280|gb|ABE56206.1| Trans-hexaprenyltranstransferase [Shewanella denitrificans OS217] Length = 323 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 134/322 (41%), Positives = 195/322 (60%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +L DM+ V+ LI +++ SDV +I + Y+I SGGKRLRP+LT+ + Y Sbjct: 3 LNAIRELAETDMKAVDQLIYQQLESDVALINQLAFYIIKSGGKRLRPLLTVLACRAMGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA +EFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GDKHLKLAAIVEFIHTASLLHDDVVDESLLRRGRETANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S L+ L+ LAEGE+ QL + + TE +Y+ VI KTA LF AA ++ Sbjct: 123 MTELDSLHVLKVLANTTNVLAEGEVLQLMNCNDPNTTEANYMRVIYCKTAKLFEAATLLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG + + AL YG LG AFQL DD+LDY +E+GKNIG+D GKPTLP+I Sbjct: 183 GVLAGASVAEQIALGEYGKFLGTAFQLTDDLLDYTASSDELGKNIGDDLAEGKPTLPLIF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G+ K K I G + + + + ++ AL T+ +A +KA +L C Sbjct: 243 AMEHGSAHAKALIKQAIEQGD-GTQAIDEIVKALHDSGALEYTKNKAIEEAEKAIAALSC 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + DS K +L+ + + + R N Sbjct: 302 VKDSRHKDALISLANIAVNRSN 323 >gi|15602211|ref|NP_245283.1| IspB [Pasteurella multocida subsp. multocida str. Pm70] gi|12720590|gb|AAK02430.1| IspB [Pasteurella multocida subsp. multocida str. Pm70] Length = 330 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 130/320 (40%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L +DM+K N IL ++ SDV +I + Y+I SGGKR+RPM+ + A L + Sbjct: 10 IDDIQKLIHRDMQKTNETILAQLNSDVTLINQLGYYIIQSGGKRIRPMIAILAARALGFH 69 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ + A IEFIHTATLLHDDVVD+SALRRG A +GN SVLVGDF+ ++AF + Sbjct: 70 GEQPITCATFIEFIHTATLLHDDVVDESALRRGNPTANAEFGNAASVLVGDFIYTRAFQL 129 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE++QL + + TEE+Y+ VI KTA LF AA + Sbjct: 130 MTQLDSLRILKVMSDATNVIAEGEVQQLMNVNDPNTTEENYMQVIYGKTARLFEAATHCA 189 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL+ YG LG AFQLVDD+LDY + +GKNIG+D GKPTLP++ Sbjct: 190 AILAHATEAQENALREYGCYLGTAFQLVDDILDYSADAQALGKNIGDDLAEGKPTLPLLH 249 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + + I G + L+ IM E+++L RA QKA D++ Sbjct: 250 AMHHGNPAQAKLIREAIEQGG-KRDILEDVLTIMTEHKSLDYAMMRAKQEAQKAVDAIAL 308 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ +K++L+ + + R Sbjct: 309 LPENEYKQALISLAYLSVDR 328 >gi|261493062|ref|ZP_05989602.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496350|ref|ZP_05992745.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307994|gb|EEY09302.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311282|gb|EEY12445.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 335 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 129/324 (39%), Positives = 199/324 (61%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ VN IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 11 LEQIQALANEDMQAVNAEILAQLNSEVLLINQLGHYIIAGGGKRIRPLIAVLAARALGYR 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 71 GKKHITAAAFIEFVHTATLLHDDVVDESDMRRGRPTANAHFGNAASVLVGDFIYTRSFQM 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 131 MTDLDSLRVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + ALK+YG LG AFQL+DD+LDY + +GKN+G+DF GKPTLP++ Sbjct: 191 AIVADASEEIETALKNYGCYLGTAFQLIDDILDYSAQSESLGKNVGDDFVEGKPTLPLLH 250 Query: 241 AFQRGTKR----EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A K + ++ I +G +E + + IM+E+++L +A QKA D Sbjct: 251 AMHAADKAGKTTQAELIRNAIENGG-ELEQIPQVLAIMQEHQSLDYAMQKAREEAQKAVD 309 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 SL LP+S +K++L+ + + R Sbjct: 310 SLGVLPESEYKQALVSLAYLSVDR 333 >gi|319897631|ref|YP_004135828.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031] gi|317433137|emb|CBY81511.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031] Length = 329 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 126/317 (39%), Positives = 195/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL++YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEAQEKALQNYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 252 HGNPQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 311 SEYKQALISLAYLSVDR 327 >gi|307543898|ref|YP_003896377.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581] gi|307215922|emb|CBV41192.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581] Length = 333 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 135/317 (42%), Positives = 190/317 (59%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + + +D VN I ++ S + ++ + +Y++ SGGKR+RP+L L A L Y GD Sbjct: 17 IHAVVAEDFAAVNRTIQTQLASRIPLVEAIGQYIVDSGGKRMRPLLVLLAARSLGYEGDQ 76 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA IEF+HT+TLLHDDVVD+S +RRG+ A WGN SVLVGDFL S++F M++ Sbjct: 77 HVALATLIEFMHTSTLLHDDVVDESHMRRGRATANDAWGNAPSVLVGDFLYSRSFQMMVG 136 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +E LS CT+AEGE++QL+ N DV E Y I+ KTA+LF AA ++I Sbjct: 137 VGSMRIMEILSAATCTIAEGEVQQLTNVGNPDVDEAAYFETIQGKTAMLFEAASHCGAII 196 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A AL++YG LG+AFQLVDD+LDYRG+ + MGKN+G+D GKPTLP+I A Sbjct: 197 ADATPEQEAALQAYGRYLGLAFQLVDDLLDYRGDADTMGKNVGDDLAEGKPTLPLIQAMV 256 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G+ + + I G + E L + I+ + AL T+ RA KA L LP Sbjct: 257 TGSPEQAKVIRQAIRQGGL--ERLDEVLAIVHDTGALDYTQRRAEEMSAKALAQLEVLPP 314 Query: 304 SSWKKSLMEVVDFCLQR 320 S ++ S+ ++ + R Sbjct: 315 SVFRDSMEQLAHRAVDR 331 >gi|331008742|gb|EGH88798.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 322 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 127/321 (39%), Positives = 187/321 (58%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN VLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPRVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S E + LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMEVMRILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + I G + E+L+ + AL T A Y +A L L Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ L+E+ +F + R + Sbjct: 302 PPSEYRDVLVELSEFAVARTH 322 >gi|190151351|ref|YP_001969876.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251769|ref|ZP_07337940.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246933|ref|ZP_07528998.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249070|ref|ZP_07531077.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251268|ref|ZP_07533189.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255915|ref|ZP_07537716.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260368|ref|ZP_07542075.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307264706|ref|ZP_07546286.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189916482|gb|ACE62734.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649199|gb|EFL79384.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306852218|gb|EFM84458.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854358|gb|EFM86554.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856784|gb|EFM88919.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861183|gb|EFM93176.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865619|gb|EFM97500.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306870018|gb|EFN01782.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 331 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 135/324 (41%), Positives = 204/324 (62%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AF----QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A ++G + + + +S I +G E + IM E+++L RA QKA D Sbjct: 247 AMHTAQEKGNQAQVDMIRSAIENGG-EREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVD 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LP+S +K++L+ + + R Sbjct: 306 ALAVLPESEYKQALISLAYLSVDR 329 >gi|170740966|ref|YP_001769621.1| polyprenyl synthetase [Methylobacterium sp. 4-46] gi|168195240|gb|ACA17187.1| Polyprenyl synthetase [Methylobacterium sp. 4-46] Length = 345 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 176/326 (53%), Positives = 228/326 (69%), Gaps = 6/326 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L ME+VN +IL R SDV MIP+V +LI SGGKRLRP+LTLATA + YR Sbjct: 18 LNDLVALVASGMERVNAMILSRTGSDVAMIPEVANHLIASGGKRLRPILTLATAQLCGYR 77 Query: 61 G-----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 D V LA ++EF+HTATLLHDDVVD+S +RRG+VAAR+ WGNQ SVLVGDFLL Sbjct: 78 AGEAGRDGDVKLAASVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNQASVLVGDFLLG 137 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 QAF M++E S AL+ LS A +AEGE+ QL +KN + TE++YL VI++KTA LF+A Sbjct: 138 QAFKMMVEVGSLRALDILSSAAAVIAEGEVMQLGAAKNTETTEDEYLAVIRAKTAELFAA 197 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A EV ++A S A +SYGMNLG+AFQL+DD LDY G +GKN+G+DFR GK T Sbjct: 198 ACEVGPVLAERPKSEAAACRSYGMNLGVAFQLIDDALDYGGTSAALGKNVGDDFREGKIT 257 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVE-NLKKAFIIMRENRALVDTEYRAYSYGQKA 294 LPV+L+F+RG+ E+ FW+ T+ G+I +L A IMR +RAL DT RA YG A Sbjct: 258 LPVVLSFRRGSAEERAFWRRTLEQGEIDEARDLDTAIGIMRRHRALEDTVERARHYGAIA 317 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320 +D+L PD+ K++L++ VDFC+ R Sbjct: 318 RDALALFPDAPMKRALLQAVDFCIAR 343 >gi|229845932|ref|ZP_04466044.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1] gi|229810936|gb|EEP46653.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1] Length = 323 Score = 306 bits (785), Expect = 3e-81, Method: Composition-based stats. Identities = 126/317 (39%), Positives = 195/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 6 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 66 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 126 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSETNYMRVIYSKTARLFEVAGQAAAIV 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL++YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 186 AGGTEAQEKALQNYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 246 HGNAQQAALIREAIEQGG-KREAIDEVLTIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 305 SEYKQALISLAYLSVDR 321 >gi|145638300|ref|ZP_01793910.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittII] gi|145272629|gb|EDK12536.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittII] Length = 323 Score = 306 bits (785), Expect = 3e-81, Method: Composition-based stats. Identities = 126/317 (39%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 6 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 66 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 126 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 186 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQALGKNVGDDLAEGKPTLPLLHAMR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 246 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 305 SEYKQALISLAYLSVDR 321 >gi|83941379|ref|ZP_00953841.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36] gi|83847199|gb|EAP85074.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36] Length = 332 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 147/313 (46%), Positives = 206/313 (65%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y G HV LA Sbjct: 20 DMTAVNDLIRDRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYDGPYHVHLAA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F ++ ET + Sbjct: 80 TVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTETNNMRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L L+ + T+AEGE+ QL+ ++NL E YL V++ KTA LFSAA +V +IA ++ Sbjct: 140 LAILANASATIAEGEVLQLTAAQNLATDEGIYLQVVRGKTAALFSAATQVGGVIATAPDA 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 QAL YG LGIAFQ+VDD+LDY+G+ N GKNIG+DFR K TLPVI A +G E Sbjct: 200 QVQALYDYGDALGIAFQIVDDLLDYQGDPNATGKNIGDDFRERKLTLPVIKAIAKGDAAE 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI GK +L+ A ++ + L +T+ A ++ ++AK +L LPD + Sbjct: 260 RAFWTRTIEKGKQEDGDLEHALSLLNAHGTLDETKAEALAWAEQAKTALNTLPDHDLTQM 319 Query: 310 LMEVVDFCLQRLN 322 L ++ D+ + R++ Sbjct: 320 LRDLADYVVARIS 332 >gi|71891880|ref|YP_277610.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795986|gb|AAZ40737.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 323 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 193/321 (60%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +LT +DME VN I R+ S++ +I +V+Y++ SGGKR+RPM+TL TA L Y+ Sbjct: 3 IDQISELTEQDMEDVNSEIRTRLASEITLINKLVQYIVDSGGKRIRPMITLLTARALCYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 HV +A IEFIHTATLLHDDVVD S +RRG+ +++GN SVLVGDF+ ++AF M Sbjct: 63 KTQHVTIATLIEFIHTATLLHDDVVDKSHMRRGRKTTNIIFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E +S L ++ +A GE+ QL+ + +T + Y+ +I SKTA LF A + S Sbjct: 123 MTELESLRILSLMADAVNIIAAGEILQLTHCNDPTITIDSYMKIIYSKTARLFEVASQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A +AL++YG +GIAFQLVDDVLDY GKN+G D GK TLP++ Sbjct: 183 AILADANTCQEKALRNYGRYMGIAFQLVDDVLDYSASETIFGKNVGNDLNEGKLTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A T ++ + +I +G L M ++ +L T RA + +KA L Sbjct: 243 AIHHSTSKQASLIIQSIKEGN-HRHLLNIILDTMHQHGSLEYTRKRAETEIKKAISCLDI 301 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP S ++++L + + +QR+ Sbjct: 302 LPPSPYRQALASLATYTVQRI 322 >gi|83854856|ref|ZP_00948386.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1] gi|83842699|gb|EAP81866.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1] Length = 332 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 147/313 (46%), Positives = 206/313 (65%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y G HV LA Sbjct: 20 DMTAVNDLIRDRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYDGPYHVHLAA 79 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F ++ ET + Sbjct: 80 TVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTETNNMRV 139 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L L+ + T+AEGE+ QL+ ++NL E YL V++ KTA LFSAA +V +IA ++ Sbjct: 140 LAILANASATIAEGEVLQLTAAQNLATDEGIYLQVVRGKTAALFSAATQVGGVIAAAPDA 199 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 QAL YG LGIAFQ+VDD+LDY+G+ N GKNIG+DFR K TLPVI A +G E Sbjct: 200 QVQALFDYGDALGIAFQIVDDLLDYQGDPNATGKNIGDDFRERKLTLPVIKAIAKGDATE 259 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI GK +L+ A ++ + L +T+ A ++ ++AK +L LPD + Sbjct: 260 RAFWTRTIEKGKQEDGDLEHALSLLNAHGTLDETKAEALAWAEQAKTALNTLPDHELTQM 319 Query: 310 LMEVVDFCLQRLN 322 L ++ D+ + R++ Sbjct: 320 LRDLADYVVARIS 332 >gi|254488187|ref|ZP_05101392.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101] gi|214045056|gb|EEB85694.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101] Length = 332 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 146/320 (45%), Positives = 205/320 (64%), Gaps = 1/320 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 + + DM VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y G Sbjct: 13 MAEYLAVDMAAVNTLIRDRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYDGP 72 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L +++F ++ Sbjct: 73 YHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMT 132 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 ET + L LS + T+AEGE+ QL+ ++NL E YL V++ KTA LFSAA EV + Sbjct: 133 ETNNMRVLAILSNASATIAEGEVLQLTAAQNLATDESVYLQVVRGKTAALFSAATEVGGV 192 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 IAG ++ QAL +G LGIAFQ+VDD+LDY+G+ + GKNIG+DFR K TLPVI A Sbjct: 193 IAGAPDAQVQALFDFGDALGIAFQIVDDLLDYQGDASATGKNIGDDFRERKLTLPVIKAV 252 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 R E FW TI G+ +L+ A ++ ++ + T A ++ +AK +L LP Sbjct: 253 ARADAEEHAFWTRTIEKGRQEDGDLEHALSLLHKHDTMTQTRAEAVAWANRAKAALDALP 312 Query: 303 DSSWKKSLMEVVDFCLQRLN 322 + + L ++ D+ + R+N Sbjct: 313 EHGVRDMLRDLADYVVARIN 332 >gi|183600352|ref|ZP_02961845.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827] gi|188020143|gb|EDU58183.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827] Length = 323 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y++ GGKR+RPM+ + L Y Sbjct: 3 LESIVELTSEDMSAVNEAILSQLNSDVALINQLGYYIVSGGGKRIRPMIAVLAGRSLGYS 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M Sbjct: 63 GQKHIQVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA S Sbjct: 123 MTDLDSMRVLKLMSEATNVIAEGEVLQLMNCNDPNITEENYMQVIYSKTARLFEAAAHAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A +AL+ YG LG AFQL+DD+LDY + ++GKN G+D GKPTLP++ Sbjct: 183 AILASATPEQEKALQDYGRYLGTAFQLIDDLLDYDADNKQLGKNTGDDLDEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT+ E + I G L M+ +L T RA QKA D+L Sbjct: 243 AMNHGTEEEAALIRQAIEQGN-GRHLLDTVLATMKRCGSLEYTYARAKEESQKAIDALST 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L DS +K +L+ + + + R Sbjct: 302 LDDSVYKDALISLAEVAISR 321 >gi|197119777|ref|YP_002140204.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem] gi|197089137|gb|ACH40408.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem] Length = 322 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 189/321 (58%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L +D++ V K + SDV +I V +Y++ SGGKR+RP L L A + Y Sbjct: 1 MDAALALIGEDLKNVELQFKKDLQSDVPLIRKVGEYVLSSGGKRIRPGLVLLAARLCGYD 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ V LA +EFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F + Sbjct: 61 GNRSVPLASVVEFIHTATLLHDDVVDNANLRRGLASANTLWGNEASVLVGDFLFSKSFSL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ L+ L+ +AEGE+ QL + +LD+T E Y+ V++SKTA+L SAA EV Sbjct: 121 MVTDGDLRILKVLADATTIIAEGEVLQLVCTSDLDITVERYIEVVRSKTAILLSAACEVG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ RQAL YGM+LGIAFQL+DD LDY + GK+IG D GK TLP+I Sbjct: 181 AILGEADPVHRQALADYGMDLGIAFQLMDDTLDYTASEEQFGKSIGHDLEEGKITLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + T +E++ S + +S E+ + +++ + T A Y K L Sbjct: 241 TLRNCTSQERDLIASVVEKELLSDEDFAQVLELVQRYGGIEHTVASAGEYVVLCKQHLEK 300 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 P S+ + +L E+ ++ + R+ Sbjct: 301 FPPSATRDALAELAEYVVTRV 321 >gi|253702068|ref|YP_003023257.1| trans-hexaprenyltranstransferase [Geobacter sp. M21] gi|251776918|gb|ACT19499.1| Trans-hexaprenyltranstransferase [Geobacter sp. M21] Length = 322 Score = 306 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 126/321 (39%), Positives = 191/321 (59%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L +D++ V K + SDV +I V +Y++ SGGKR+RP L L + + Y Sbjct: 1 MDAALALIGEDLKNVELQFKKDLQSDVPLIRKVGEYVLSSGGKRIRPALVLLASRLCGYD 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ V LA +EFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F + Sbjct: 61 GNRSVPLASVVEFIHTATLLHDDVVDNANLRRGLASANTLWGNEASVLVGDFLFSKSFSL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ L+ L+ +AEGE+ QL + +LD+T E Y+ V++SKTA+L SAA EV Sbjct: 121 MVTDGDLRILKVLADATTIIAEGEVLQLVCTCDLDITVERYIEVVRSKTAILLSAACEVG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ RQAL YGM+LGIAFQL+DD LDY + GK+IG D GK TLP+I Sbjct: 181 AILGEADPEHRQALADYGMDLGIAFQLMDDTLDYTASEEQFGKSIGHDLEEGKITLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + T++E++ S + +S E+ + +++ + T A + K L Sbjct: 241 TLRNCTEQERDLIASVVEKELLSDEDFAQVLELVQRYGGIEHTVASAAEHVVLCKRHLEK 300 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 P S+ +++L E+ ++ + R+ Sbjct: 301 FPPSATREALAELAEYVVTRV 321 >gi|16272821|ref|NP_439042.1| octaprenyl-diphosphate synthase [Haemophilus influenzae Rd KW20] gi|260579972|ref|ZP_05847802.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae RdAW] gi|1170590|sp|P44916|ISPB_HAEIN RecName: Full=Octaprenyl-diphosphate synthase; AltName: Full=All-trans-octaprenyl-diphosphate synthase; AltName: Full=Octaprenyl pyrophosphate synthase; Short=OPP synthase gi|1573899|gb|AAC22540.1| octaprenyl-diphosphate synthase (ispB) [Haemophilus influenzae Rd KW20] gi|260093256|gb|EEW77189.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae RdAW] gi|309751451|gb|ADO81435.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2866] Length = 329 Score = 306 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 126/317 (39%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 252 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 311 SEYKQALISLAYLSVDR 327 >gi|307262498|ref|ZP_07544143.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306867875|gb|EFM99706.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 331 Score = 306 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 135/324 (41%), Positives = 204/324 (62%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESNMRRGRATANATFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AF----QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A ++G + + + +S I +G E + IM E+++L RA QKA D Sbjct: 247 AMHTAQEKGNQAQVDMIRSAIENGG-EREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVD 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LP+S +K++L+ + + R Sbjct: 306 ALAVLPESEYKQALISLAYLSVDR 329 >gi|304413337|ref|ZP_07394810.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola LSR1] gi|304284180|gb|EFL92573.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola LSR1] Length = 327 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 130/320 (40%), Positives = 193/320 (60%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + +++LT KDM VN I +++ SDV +I ++ Y+I +GGKR+RPM+ + A L Y+ Sbjct: 8 LDEVKELTAKDMATVNDTIEEQMRSDVALITEISHYIINNGGKRIRPMIAILVAQALGYK 67 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ +A IEFIHTATLLHDDVVD+S LRRGK +GN SVLVGDF+ ++AF M Sbjct: 68 GNQHITIAVLIEFIHTATLLHDDVVDNSDLRRGKATVNAQFGNAASVLVGDFIYTRAFQM 127 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S LE +S +A+GE++QL K+ +TEE+YL VI SKTA LF AA + S Sbjct: 128 MTQLGSMRVLEVMSTATNMIAKGEVQQLINCKDPRITEENYLSVIGSKTAKLFEAASQSS 187 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG AL+ YG ++GIAFQL+DD+LDY N GK G D GK TLP++ Sbjct: 188 AILAGANKEKELALQRYGHHIGIAFQLIDDLLDY-SPENSTGKKSGADLAEGKVTLPLLH 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A ++GT + + I +++E +L T A + KA L+ Sbjct: 247 AIEKGTPEQTALLCNAIQQDN-GRHLFTSVQQVLKEYGSLNYTRQCAKTEANKAIAELQV 305 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ ++ +L ++ F + R Sbjct: 306 LPENPYRIALEKLAKFSIMR 325 >gi|254448914|ref|ZP_05062369.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015] gi|198261451|gb|EDY85741.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015] Length = 322 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 138/316 (43%), Positives = 197/316 (62%), Gaps = 2/316 (0%) Query: 5 EDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 +DL +M+ VN LI++R+ SDV +I + Y+I SGGKRLRP L + A Y+G++H Sbjct: 7 QDLIGGEMKAVNALIVERLKSDVALINQLGHYIIQSGGKRLRPQLAVLAARAAGYQGEDH 66 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + +A IEFIHTATLLHDDVVD S LRRG+ A V+GN+ +VLVGDFL S++F M++E Sbjct: 67 LQIAAIIEFIHTATLLHDDVVDASELRRGRETANAVFGNEAAVLVGDFLYSRSFEMMVEL 126 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 S + LS +AEGE+ QL + D TE YL VI SKTA LF AA + ++++ Sbjct: 127 DSMRIMSILSRATNVIAEGEVMQLLNIHDADTTEARYLEVIHSKTAKLFEAATRIGAVLS 186 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 G+ QAL YGM+LG AFQL+DDVLDY + + MGKN+G+D GKPTLP+I A + Sbjct: 187 GLPQEKEQALADYGMHLGTAFQLIDDVLDYSADADAMGKNVGDDLAEGKPTLPLIYAMRE 246 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 G++ E + I +G + + + ++ AL T A A ++ CLPDS Sbjct: 247 GSEDEAALIRRAIENGGL--DEIDAVLAAIQSTGALEFTRRAAQREADAAVAAVGCLPDS 304 Query: 305 SWKKSLMEVVDFCLQR 320 ++++L+ + F + R Sbjct: 305 EYRQALIALAQFSVDR 320 >gi|114048617|ref|YP_739167.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-7] gi|113890059|gb|ABI44110.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-7] Length = 331 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 137/320 (42%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+ Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVDYQ 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 71 GEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S L L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++ Sbjct: 131 MTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATLLA 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 191 AVLAGATPEQETALGDYGKYLGTAFQLTDDLLDYTADSEELGKNIGDDLAEGKPTLPLIY 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT+ E+ + I G ++K + AL T+ +A KA +L Sbjct: 251 AIAHGTEEEQQLIRQAIEQGD-GTHAIEKIVAALHHCGALTYTQQKAIEESNKAIAALSV 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS++K +L+ + + R Sbjct: 310 LPDSNFKTALISLAKISVDR 329 >gi|120599984|ref|YP_964558.1| trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1] gi|146292082|ref|YP_001182506.1| trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32] gi|120560077|gb|ABM26004.1| Trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1] gi|145563772|gb|ABP74707.1| Trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32] Length = 331 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 138/320 (43%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARTVSYE 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 71 GDAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + L L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++ Sbjct: 131 MTELDNMRVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLA 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG AL +YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 191 AVLAGASTEQETALGNYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIY 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT E+ + I G + + K + AL T+ +A +KA +L Sbjct: 251 AIAHGTNEERQLIRQAIEQGD-GTQAIDKIVAALHHCGALTYTQQKAIEESEKAIAALDV 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +K++L+ + + R Sbjct: 310 LPDSEFKEALVSLAKISVDR 329 >gi|148265763|ref|YP_001232469.1| polyprenyl synthetase [Geobacter uraniireducens Rf4] gi|146399263|gb|ABQ27896.1| Polyprenyl synthetase [Geobacter uraniireducens Rf4] Length = 322 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 130/321 (40%), Positives = 187/321 (58%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ L +D++ V K + SDV +I V +Y++ SGGKR+RP L L +A + Y Sbjct: 1 MEAALALIGEDLKNVELQFKKDLQSDVPLIRKVGEYVLSSGGKRIRPALLLLSAKLCGYH 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA IEFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F + Sbjct: 61 GDRHVPLASVIEFIHTATLLHDDVVDNANLRRGLASANTLWGNEASVLVGDFLFSKSFSL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ L+ LS +AEGE+ QL + +LDVT E Y+ V+KSKTA+L SAA + Sbjct: 121 MVADGDLNVLKVLSGATTIIAEGEVLQLVCTSDLDVTTERYIEVVKSKTAILLSAACQSG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + AL+++GM LGIAFQLVDD LDY + GK+IG D GK TLP+I Sbjct: 181 AILGKASSEREVALQNFGMELGIAFQLVDDTLDYVASEEQFGKSIGHDLEEGKITLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q T EK ++ + ++ F ++ + + A Y + K L Sbjct: 241 TLQHCTAAEKEKIAEVVDKDVLDEDDFAAVFELVHQYGGIDHAVTVAKDYVARCKAYLDV 300 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 DS K +L+ + D+ + R+ Sbjct: 301 FEDSPEKYALVNLADYVVTRV 321 >gi|118593444|ref|ZP_01550824.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata IAM 12614] gi|118433923|gb|EAV40581.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata IAM 12614] Length = 338 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 166/322 (51%), Positives = 227/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DL M +VN LIL + S+VE+IP++ K+LI SGGKRLRPMLTLA A M Y+ Sbjct: 17 IQPLVDLVSGGMGEVNELILSKAGSNVELIPEIAKHLISSGGKRLRPMLTLACADMFGYQ 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M Sbjct: 77 GDGHVTLAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKM 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S EAL LS + +AEGE+ QL +KN+ TE DYL VI++KTA LF+AA EV Sbjct: 137 MVDVGSLEALRILSTASAVIAEGEVLQLGAAKNIATTEADYLRVIEAKTAALFAAAAEVG 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG +++A ++YGM LG AFQLVDD LDY G ++GK++G+DFR GK TLPV+L Sbjct: 197 PVIAGQSAEMKRAARTYGMELGYAFQLVDDALDYGGSSADLGKDVGDDFREGKITLPVVL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A RGT +++FW+ + +I +L++A ++ + AL +T RA YG KA +L Sbjct: 257 AVARGTDADRDFWRRCLEGEEIQDGDLEQAIELLNKYDALSETIERAKDYGNKALAALDT 316 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP + +L + V FC+ R++ Sbjct: 317 LPSGAHSDALGDAVAFCISRVS 338 >gi|87122767|ref|ZP_01078640.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121] gi|86161932|gb|EAQ63224.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121] Length = 327 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 128/326 (39%), Positives = 181/326 (55%), Gaps = 7/326 (2%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + + VN IL ++ S++ +I + Y+I +GGKRLRP+L L A Sbjct: 4 NSIHAVVNTEFNLVNDHILSQLKSEIPLIEQIGYYIISNGGKRLRPLLVLMAARACGNAD 63 Query: 62 -----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 DN V +A IEFIHTATLLHDDVVD+S +RRGK A WGN SVLVGDFL S+ Sbjct: 64 ASNYQDNMVKMATIIEFIHTATLLHDDVVDESDMRRGKKTANEEWGNAPSVLVGDFLYSR 123 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++E S + ++ L+ ++EGE++QL + +EE YL VI+ KTA LF A Sbjct: 124 AFQIMVEVGSMQCMQILAETTNIISEGEVQQLINCGDPSTSEESYLKVIQYKTAKLFEGA 183 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +++A +QAL YG +G AFQL+DDV+DY EMGKN+G+D GKPTL Sbjct: 184 ALCGAIVANANKEQQQALADYGTYVGTAFQLIDDVMDYTSTAEEMGKNVGDDLAEGKPTL 243 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 P+I + + I G + E L ++ A+ TE A Q A D Sbjct: 244 PLIYTMKHAPTEAAQRVRQAIETGGL--EQLDTIIADVQACGAIEYTEKAAQEQAQLAID 301 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 L LPDS +K +L+++ + + R N Sbjct: 302 VLAPLPDSVYKTALIDLANASVNRRN 327 >gi|145629957|ref|ZP_01785739.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021] gi|145634043|ref|ZP_01789754.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA] gi|145636989|ref|ZP_01792653.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittHH] gi|145641936|ref|ZP_01797510.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae R3021] gi|148828062|ref|YP_001292815.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG] gi|229844760|ref|ZP_04464899.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1] gi|144984238|gb|EDJ91661.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021] gi|145268487|gb|EDK08480.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA] gi|145269847|gb|EDK09786.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittHH] gi|145273415|gb|EDK13287.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae 22.4-21] gi|148719304|gb|ABR00432.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG] gi|229812474|gb|EEP48164.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1] Length = 323 Score = 305 bits (782), Expect = 6e-81, Method: Composition-based stats. Identities = 126/317 (39%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 6 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 66 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 126 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 186 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 246 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 305 SEYKQALISLAYLSVDR 321 >gi|268592839|ref|ZP_06127060.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131] gi|291311626|gb|EFE52079.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131] Length = 323 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 190/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +LT +DM VN IL ++ SDV +I + Y++ GGKR+RPM+ + L Y Sbjct: 3 LESIIELTTEDMSAVNEAILSQLNSDVALINQLGYYIVSGGGKRIRPMIAVLAGRSLGYS 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H +A IEFIHTATLLHDDVVD+S +RRGK A V+GN SVLVGDF+ +++F M Sbjct: 63 GHKHTQVAALIEFIHTATLLHDDVVDESDMRRGKQTANAVFGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE+ QL + ++TEE+Y+ VI SKTA LF AA S Sbjct: 123 MTDLDSMRVLKLMSEATNVIAEGEVLQLMNCNDPNITEENYMQVIYSKTARLFEAAAHAS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A +AL+ YG +G AFQL+DD+LDY + ++GKN G+D GKPTLP++ Sbjct: 183 AILANATPEQEKALQDYGRYIGTAFQLIDDLLDYDADNAQLGKNTGDDLDEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G + E + I G L M+ +L T RA QKA D+L Sbjct: 243 AMQNGNEEESALIRQAIEQGN-GRHLLDTVLATMKRCGSLEYTYARAQEEAQKAIDALNI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 + DS +K +L+ + +QR Sbjct: 302 IEDSIYKDALIGLAYIAIQR 321 >gi|113969238|ref|YP_733031.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-4] gi|113883922|gb|ABI37974.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-4] Length = 331 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 137/320 (42%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+ Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVDYQ 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 71 GEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S L L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++ Sbjct: 131 MTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATLLA 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 191 AVLAGATPEQETALGDYGKYLGTAFQLTDDLLDYTADSEELGKNIGDDLAEGKPTLPLIY 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT+ E+ + I G ++K + AL T+ +A KA +L Sbjct: 251 AIAHGTEEEQQLIRQAIEQGD-GTHAIEKIVAALHHCGALTYTQQKAIEESNKAIAALAV 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +K +L+ + + R Sbjct: 310 LPDSDFKTALISLAKISVDR 329 >gi|148556350|ref|YP_001263932.1| polyprenyl synthetase [Sphingomonas wittichii RW1] gi|148501540|gb|ABQ69794.1| Polyprenyl synthetase [Sphingomonas wittichii RW1] Length = 341 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 150/320 (46%), Positives = 210/320 (65%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM VN +IL R+ SDV +IP++ +LI GGKR+RPMLTLA A +L+Y Sbjct: 20 LDPIMALVAADMNAVNSVILARMQSDVPLIPELAGHLIAGGGKRMRPMLTLACAKLLDYA 79 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H LA +EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S++F + Sbjct: 80 GERHHKLAATVEFIHTATLLHDDVVDQSGLRRGRSTANMIWGNAASVLVGDFLFSRSFEL 139 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S L LS + +AEGE+ QL+ + ++ +EE YL +I +KTAVLF+AA ++ Sbjct: 140 MVEDGSLRVLRILSNASAVIAEGEVNQLTAQRRIETSEERYLEIIAAKTAVLFAAACRIA 199 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + +V +AL YG LGIAFQLVDDV+DY + MGK+ G+DFR+GK TLPVIL Sbjct: 200 AVVAEREPAVEEALDQYGRYLGIAFQLVDDVIDYVSDGATMGKDAGDDFRDGKVTLPVIL 259 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+ R +++F + I + E+L +A I+R AL DT RA Y Q+A D+L Sbjct: 260 AYARAEAADRDFLREAIEGLRNEDEDLVRATGILRGTGALADTAARARHYAQRAIDALAS 319 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P + +L+E F + R Sbjct: 320 FPAGQARSALIEAAQFAVSR 339 >gi|319778972|ref|YP_004129885.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9] gi|317108996|gb|ADU91742.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9] Length = 321 Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 136/321 (42%), Positives = 197/321 (61%), Gaps = 3/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + +DM V+ +I R+ S+V +I + +Y+I +GGKR+RP + L + L Y Sbjct: 3 IKAIFQPISEDMSAVDKVIRSRLNSEVVLIRTIGEYIISAGGKRIRPAMLLMMSKALGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H L+A IEFIHT+TLLHDDVVD+S +RRG A V+GN SVLVGD+L S++F M Sbjct: 63 GSLHHLMAAVIEFIHTSTLLHDDVVDESDMRRGSATANAVFGNAASVLVGDYLYSRSFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S ++ +S +AEGE+ QL + +V + Y+ VIKSKTA LF AA V+ Sbjct: 123 MVEADSMRIMQIMSEATTVIAEGEVLQLLNVHDPNVDFDRYMDVIKSKTAKLFEAATRVA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG ++V Q YG ++G AFQ++DDVLDY G ++GKN+G+D R GKPTLP+I Sbjct: 183 AVLAGADDAVEQKAALYGTHVGTAFQVIDDVLDYSGSAEDLGKNVGDDLREGKPTLPLIR 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 GT +K + I +G E + +A +R AL T A A +L Sbjct: 243 VMSVGTPEQKALIRHAIEEGDADFERVAQA---IRSTDALDYTRNIAQEQANIALSALDG 299 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LPDS++KKSL ++V+F L R Sbjct: 300 LPDSAYKKSLQDLVNFSLART 320 >gi|58425655|gb|AAW74692.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 408 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 126/322 (39%), Positives = 179/322 (55%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ +I +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 89 LPQIQSLAAPDMAAVDAVIRRRLASDVMLINQIADHIISAGGKRLRPMLVILAGHAAGGS 148 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 149 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 208 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 209 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 268 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E E+GKN+G+D GK TLP+I Sbjct: 269 ALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAAELGKNLGDDLAEGKATLPLIH 328 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + L + RA Y A+ +L Sbjct: 329 AMAHSDATTRERLRQIVEQGDAA--AMPDVLAAIHATGGLDYSRQRAGEYAAAAEQALDT 386 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 387 LPYSPAVAALRGLARYAVERTH 408 >gi|326793607|ref|YP_004311427.1| trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1] gi|326544371|gb|ADZ89591.1| Trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1] Length = 329 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 128/327 (39%), Positives = 191/327 (58%), Gaps = 9/327 (2%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML----- 57 + D+ + +VN IL ++ S++ +I + Y+I +GGKR+RP++ L A Sbjct: 5 KIHDVVADEFSQVNDYILSQLKSEIPLIEQIGYYIISNGGKRMRPLMVLLAARAAQPAQG 64 Query: 58 --EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 E + + V +A IEFIHTATLLHDDVVD+S +RRGK A WGN SVLVGDFL S Sbjct: 65 LSETQLSHTVKMASIIEFIHTATLLHDDVVDESDMRRGKKTANEEWGNAPSVLVGDFLYS 124 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 +AF +++ S +E LS ++EGE++QL + D +EE YL VI+ KTA LF Sbjct: 125 RAFQIMVNVGSVPCMEILSNTTNIISEGEVQQLINCGDPDTSEESYLKVIQYKTAKLFEG 184 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 A +++AG ++AL++YGM +G AFQLVDDV+DY EMGK++G+D GKPT Sbjct: 185 AALCGAVVAGASEEHQKALQAYGMYVGTAFQLVDDVMDYVSTAEEMGKSVGDDLAEGKPT 244 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 LP+I + G K + I G + ENL++ +R A+ TE +A A Sbjct: 245 LPLIYTMKHGDADAKERVRQAILTGGL--ENLEQILSDVRACGAIEYTEKQAEEQADLAI 302 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +++ P+S K +L+ + + ++R N Sbjct: 303 KAIQAFPESEHKSALIALANAAVKRRN 329 >gi|165977439|ref|YP_001653032.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877540|gb|ABY70588.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 331 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 134/324 (41%), Positives = 203/324 (62%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AF----QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A ++G + + + +S I +G E + IM E+++L RA QKA D Sbjct: 247 AMHTAQEKGNQAQVDIIRSAIENGG-EREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVD 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LP+S + ++L+ + + R Sbjct: 306 ALAVLPESEYTQALISLAYLSVDR 329 >gi|68249468|ref|YP_248580.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP] gi|329122893|ref|ZP_08251464.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116] gi|68057667|gb|AAX87920.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP] gi|327471824|gb|EGF17264.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116] Length = 329 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 126/317 (39%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 252 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 311 SEYKQALISLAYLSVDR 327 >gi|301169600|emb|CBW29201.1| octaprenyl diphosphate synthase [Haemophilus influenzae 10810] Length = 329 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 127/317 (40%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 252 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +KK+L+ + + R Sbjct: 311 SEYKKALISLAYLSVDR 327 >gi|103486007|ref|YP_615568.1| trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256] gi|98976084|gb|ABF52235.1| Trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256] Length = 337 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 153/314 (48%), Positives = 213/314 (67%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +VN +IL R+ S+V +IP++ +LI GGKR+RPMLTLA +L+Y G H Sbjct: 22 LVAADMNEVNAVILDRMQSEVPLIPELAGHLIAGGGKRMRPMLTLACGRLLDYPGRRHCK 81 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S+AF +++E S Sbjct: 82 LAAAVEFIHTATLLHDDVVDKSDLRRGRKTANVIWGNSASVLVGDFLFSRAFEVMVEDGS 141 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ LS + +AEGE+ QLS + ++ +E+ YL +I +KTA LF+AA ++++++A Sbjct: 142 LKVLKILSRASAVIAEGEVNQLSAQRRIETSEDQYLAIINAKTAELFAAACKIAAVVAER 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + AL +YG NLGIAFQLVDD +DY + MGK +G+DFR+GK TLPVILA+ RG+ Sbjct: 202 DEATEAALDAYGRNLGIAFQLVDDAIDYVSDAETMGKGVGDDFRDGKVTLPVILAYARGS 261 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E++FWK I K S E+L A ++R++ + DT RA YGQ+A D++ S Sbjct: 262 AEERDFWKQAITGHKTSDEDLVYATSLLRKHDTIADTLARARHYGQRAVDAIGGFRASQA 321 Query: 307 KKSLMEVVDFCLQR 320 K +L E V F + R Sbjct: 322 KSALTEAVAFAVAR 335 >gi|319425378|gb|ADV53452.1| Polyprenyl synthetase [Shewanella putrefaciens 200] Length = 331 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 138/320 (43%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A + Y Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARTVSYE 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 71 GDAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + L L+ LAEGE+ QL + D TEE Y+ VI KTA LF AA ++ Sbjct: 131 MTELDNMRVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLA 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG AL +YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 191 AVLAGATPEHETALGNYGKYLGTAFQLTDDLLDYTADTEELGKNIGDDLAEGKPTLPLIY 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT+ E+ + I G + + K + AL T+ +A +KA +L Sbjct: 251 AIAHGTEEERQLIRQAIEQGD-GTQAIDKIVAALHHCGALAYTQQKAIEESEKAIAALDV 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +K++L+ + + R Sbjct: 310 LPDSDFKEALVALAKISVDR 329 >gi|153825628|ref|ZP_01978295.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2] gi|149740658|gb|EDM54765.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2] Length = 304 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 125/302 (41%), Positives = 179/302 (59%), Gaps = 1/302 (0%) Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78 I + SDV +I + Y+I GGKRLRP+L + +A L Y+G +H A IEFIHTAT Sbjct: 2 IHAXLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTAT 61 Query: 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVAC 138 LLHDDVVD+S LRRGK A +GN SVLVGDF+ +++F M+ E S + L+ +S Sbjct: 62 LLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVN 121 Query: 139 TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYG 198 +AEGE++QL + D TE Y+ VI SKTA LF AA ++ +++ V A+++YG Sbjct: 122 VIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYG 181 Query: 199 MNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTIN 258 LG AFQL+DDV+DY + +EMGKN+G+D GKPTLP++ A Q G + + I Sbjct: 182 KYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIE 241 Query: 259 DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCL 318 + L + M + +L T +A KA L LP+S +K++L+ + + Sbjct: 242 KAN-GMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAVLPESEYKQALITLAHMAV 300 Query: 319 QR 320 R Sbjct: 301 NR 302 >gi|226946118|ref|YP_002801191.1| trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ] gi|226721045|gb|ACO80216.1| Trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ] Length = 322 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 190/321 (59%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + D V+ +I K++ S V ++ + Y+I +GGKRLRP+L L L Sbjct: 4 QAFYRVVADDFSAVDGIIRKQLTSRVPLVETIGDYIISAGGKRLRPLLVLLCGNALGKCD 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + LLA AIEF+HT+TLLHDDVVDDS LRRG+ + +WGN SVLVGDFL ++ F M+ Sbjct: 64 ERMRLLAAAIEFLHTSTLLHDDVVDDSELRRGRSTSNALWGNAPSVLVGDFLYARCFEML 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF AA ++ Sbjct: 124 VELASMPVMRIMSQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEAASHGAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AG + +AL+ +G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 SLAGATSEQAEALRCFGDSLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G +E+L + AL T RA + ++A L L Sbjct: 244 MREGTPGQAALVRRAIQKG--GIEDLTAIVAAVEAAGALDYTARRAREHAERAIACLDTL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P ++ +L+E+ F + R + Sbjct: 302 PPGEYRDALVELSRFAVARTH 322 >gi|117921658|ref|YP_870850.1| polyprenyl synthetase [Shewanella sp. ANA-3] gi|117613990|gb|ABK49444.1| Polyprenyl synthetase [Shewanella sp. ANA-3] Length = 331 Score = 304 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 137/320 (42%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI K++ SDV +I + Y+I GGKRLRP+L++ A ++Y+ Sbjct: 11 LNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAVDYQ 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA IEFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 71 GEAHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQM 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S L L+ LAEGE+ QL + + TEE Y+ VI KTA LF AA ++ Sbjct: 131 MTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAATLLA 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG AL YG LG AFQL DD+LDY + E+GKNIG+D GKPTLP+I Sbjct: 191 AVLAGATPEQEAALGDYGKYLGTAFQLTDDLLDYTADSEELGKNIGDDLAEGKPTLPLIY 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT+ E+ + I G ++K + AL T+ +A KA +L Sbjct: 251 AIAHGTEEEQQLIRQAIEQGD-GTHAIEKIVAALHHCGALTYTQQKAIEESNKAIAALAV 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +K +L+ + + R Sbjct: 310 LPDSDFKTALISLAKISVDR 329 >gi|117926629|ref|YP_867246.1| trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1] gi|117610385|gb|ABK45840.1| Trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1] Length = 331 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 136/318 (42%), Positives = 205/318 (64%), Gaps = 1/318 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGD 62 L L +D+++ N +IL+++ S VE+I V +L+ SGGKRLRP+LTL TA + Y + D Sbjct: 12 LRSLVEQDLQRTNEVILEQLNSPVELITQVGDHLLNSGGKRLRPILTLVTAKLFGYQKAD 71 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 H LLA +EFIHTATLLHDDVVD S RRG+ A VWGN+ +LVGDFL S++F +++ Sbjct: 72 VHALLAAVVEFIHTATLLHDDVVDKSNTRRGQATANSVWGNKAPILVGDFLFSRSFQIMV 131 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E L +S ++EGE+ QL S +L EE YL VI+ KTA LF++A ++ ++ Sbjct: 132 EHGDLRVLRIVSDCCAIISEGEVMQLVASNDLATDEERYLDVIRHKTASLFASASQLGAV 191 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +A + + Q + YGM LG A+Q+VDD+LDY E ++GKN+G+DF+ GK TLPVI AF Sbjct: 192 VADQSDEIAQRMYDYGMMLGTAYQVVDDLLDYSAETEKLGKNVGDDFQEGKITLPVIHAF 251 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + G E+ FW+ + D + + A ++ ++ +L T +A + KAK +L LP Sbjct: 252 RSGDAEEQAFWRRCLEDEEQDESSFDHARALIAKHGSLDYTMSQARALIVKAKAALAPLP 311 Query: 303 DSSWKKSLMEVVDFCLQR 320 +S+ +++LM++ D + R Sbjct: 312 ESAERQALMDLADLSVDR 329 >gi|300309704|ref|YP_003773796.1| octaprenyldiphosphate synthase [Herbaspirillum seropedicae SmR1] gi|300072489|gb|ADJ61888.1| octaprenyldiphosphate synthase protein [Herbaspirillum seropedicae SmR1] Length = 309 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 139/309 (44%), Positives = 200/309 (64%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 ME VN +I +++ S+V ++ V +Y+I +GGKRLRP+L + A Y+G++H LA I Sbjct: 1 MEAVNAVIRRQLYSEVPLVNQVAEYIISAGGKRLRPVLVVLIANAFGYKGEHHHSLAAVI 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S+LRRGK A ++GN SVLVGDFL S+AF M++ + +E Sbjct: 61 EFIHTATLLHDDVVDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVAVGNPRVME 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 ++ +AEGE+ QL N DV E YL VI+SKTA LF AA ++ +LIAG + Sbjct: 121 IVADATNVIAEGEVLQLLNMHNPDVDENGYLQVIRSKTAKLFEAASQIGALIAGADEAGI 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A YG ++G AFQL+DDVLDY G E+GKN+G+D R GKPTLP+I Q GT +++ Sbjct: 181 EAAAEYGRSIGTAFQLIDDVLDYSGNSAEIGKNVGDDLREGKPTLPLIWLMQHGTPQQRE 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 ++ I +G ++ + + + AL T +A ++A D++ LPDS +KKSL+ Sbjct: 241 LVRTCIENG--DEQHFDEVLSAITHSGALAYTREQAEIAARRAADAIISLPDSQFKKSLL 298 Query: 312 EVVDFCLQR 320 E+ F + R Sbjct: 299 ELSAFAVDR 307 >gi|163792420|ref|ZP_02186397.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] gi|159182125|gb|EDP66634.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] Length = 340 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 153/320 (47%), Positives = 212/320 (66%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L +M KVN IL+ + S V +IP + +++ SGGKRLRPMLTLATA + Y Sbjct: 19 VDALRRLVDANMLKVNRAILEHMQSPVALIPQLAGHIVASGGKRLRPMLTLATAGLCGYT 78 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA +EFIHTATLLHDDVVD+S LRRG+ A VWGNQ SVLVGDFL S+AF + Sbjct: 79 GERHIGLAACVEFIHTATLLHDDVVDESDLRRGQDTANAVWGNQASVLVGDFLFSRAFQL 138 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S + L+ LS + +AEGE+ QL + ++D TE YL VI+ KTA LF+AA ++ Sbjct: 139 MVGDGSLKVLKILSDASAIIAEGEVHQLITTNDIDTTEAAYLEVIRCKTAQLFAAAAQIG 198 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + AL+ +G +LG+AFQLVDDVLDY E +GK +G+DFR GK TLPVIL Sbjct: 199 PVVAERPEAEEMALEGFGRDLGVAFQLVDDVLDYAAEQAALGKTVGDDFREGKVTLPVIL 258 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+Q G E+ FWK TI D ++L +A +M ++ L + RA Y A+ +LR Sbjct: 259 AYQAGDDPERAFWKRTIGDLDQRDDDLAEAQRLMAKHGTLEASLNRARDYADAAQAALRS 318 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P + ++ +L E+VDFC++R Sbjct: 319 FPANPYRAALEELVDFCVER 338 >gi|302877611|ref|YP_003846175.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] gi|302580400|gb|ADL54411.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] Length = 320 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 132/322 (40%), Positives = 192/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ L DM V+ +I ++ S+V ++ V +Y++ SGGKRLRP L + +A Y Sbjct: 1 MENFNQLLAADMASVDQVIRNKLHSEVVLVNQVAEYIVNSGGKRLRPALVVLSAHAFNYT 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M Sbjct: 61 GEHHHELAAVVEFIHTATLLHDDVVDESGLRRGRETANALFGNAASVLVGDFLYSRAFQM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S ++ L+ +AEGE+ QL + DV E+Y+ VI KTA LF AA+ + Sbjct: 121 MVEVGSMRVMQTLADATNVIAEGEVLQLLNCNDADVDAENYMRVIHYKTAKLFEAAMRLG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + A +YGM+LG AFQL+DDVLDY + GK++G+D GKPTLP+I Sbjct: 181 AILAKTSSEDEAAAATYGMHLGTAFQLIDDVLDYSADEAATGKHLGDDLAEGKPTLPLIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q GT ++ +S I +G + I+ + AL T +A + A +++ Sbjct: 241 AMQHGTAQQAAVVRSAIEEGDVG--KFADVLKIIHDTGALDFTRLQAMREVELACAAIKG 298 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +K LME+ F R + Sbjct: 299 LPASKYKTCLMELAHFAATRQH 320 >gi|270265042|ref|ZP_06193305.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13] gi|270040976|gb|EFA14077.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13] Length = 310 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 129/309 (41%), Positives = 185/309 (59%), Gaps = 1/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M VN IL+++ SDV +I + Y+I GGKR+RPM+ + A L Y+GD H+ +A I Sbjct: 1 MAAVNATILEQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALHYQGDKHITVAALI 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M+ +S L Sbjct: 61 EFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLESLRVLA 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S++++ + Sbjct: 121 LMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQSSAILSEASEAEE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +AL+ YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++ A + G + Sbjct: 181 KALQDYGRYLGTAFQLIDDLLDYSADGSTLGKNTGDDLNEGKPTLPLLHAMRNGNSAQTA 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G L+ M++ +L T RA KA +L+ LP+S + +L Sbjct: 241 MIREAIEQGS-GRHLLEPVLQAMQQCGSLEYTRQRAEEEADKAIAALQVLPESPHRSALE 299 Query: 312 EVVDFCLQR 320 + +QR Sbjct: 300 GLAHLAVQR 308 >gi|145632254|ref|ZP_01787989.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655] gi|144987161|gb|EDJ93691.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655] Length = 323 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 128/317 (40%), Positives = 193/317 (60%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 6 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 66 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 126 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSETNYMRVIYSKTARLFEVAGQAAAIV 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 186 AGGTEVQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA DS+ LP+ Sbjct: 246 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDSIAILPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +KK+L+ + + R Sbjct: 305 SDYKKALISLAYLSVDR 321 >gi|332308087|ref|YP_004435938.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175416|gb|AEE24670.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 323 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 132/321 (41%), Positives = 199/321 (61%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM VN LI K++ SDV +I + Y++ SGGKRLRP+LT+ A L + Sbjct: 3 LDHILSLAEPDMLAVNQLIQKQVNSDVSLINQLGFYIVNSGGKRLRPLLTVLAARALNIQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + H LA IEFIHTATLLHDDVVD+S +RRG+ A V+GNQ SVLVGDFL +++F M Sbjct: 63 TEQHHTLAAIIEFIHTATLLHDDVVDESTMRRGRETANEVFGNQASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S ++ LS +AEGE+ QL + + TEE Y+ VI SKTA LF AA ++ Sbjct: 123 MVTLDSMRVMQILSDATNVIAEGEVLQLMNCNDPNTTEESYMEVIYSKTARLFEAATLLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ ++ A++ YG LG AFQLVDD++DY + +MGKN+G+D GKPTLP++ Sbjct: 183 AVLTKQSEAIENAMQDYGKYLGTAFQLVDDIMDYASDSEDMGKNMGDDLAEGKPTLPLLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G +++ + I G ++NL M + AL T+++A Q+A D+L Sbjct: 243 AMWHGNEQQAAMIREAIESGN-GMDNLTLILEAMEQTNALGYTKHQALKASQQAVDALAP 301 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 +P+S +K++L+ + ++R+ Sbjct: 302 IPESHYKQALIGLAHVAVERV 322 >gi|149187005|ref|ZP_01865313.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21] gi|148829394|gb|EDL47837.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21] Length = 338 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 149/320 (46%), Positives = 216/320 (67%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT + M VN +IL R+ S+V +IP + +LI GGKRLRPMLTLA A ++ Y Sbjct: 17 IEPMLALTAQGMNAVNQVILDRMQSEVPLIPALAGHLISGGGKRLRPMLTLAGAELVGYS 76 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA A+EFIHTATLLHDDVVD S LRRGK AA +++GN +VLVGDFL S++F + Sbjct: 77 GTRHHKLAAAVEFIHTATLLHDDVVDGSDLRRGKAAANIIFGNPATVLVGDFLFSRSFEL 136 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S + L+ LS + +AEGE+ QL+ + +D +E+ YLH+I++KTA LF+AA ++ Sbjct: 137 MTEDGSLKVLKILSGASAIIAEGEVDQLTAQRKIDTSEQRYLHIIRAKTAALFAAASRIA 196 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A Q+L YG NLG+AFQLVDD LDY + EMGK+ G+DFR GK TLPVIL Sbjct: 197 AVVAECSEEEEQSLDEYGRNLGVAFQLVDDALDYDSDAAEMGKDRGDDFREGKMTLPVIL 256 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+ RG++ E+ FWK+ I + S +L +A ++ + A+ DT+ RA + Q+A D+L Sbjct: 257 AYARGSEEEREFWKAAIAGFRTSDSDLDEAIRLIEVHNAVADTKARARHFAQRAIDALSI 316 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PD ++++ + F + R Sbjct: 317 FPDGKARRAMTQAALFAVSR 336 >gi|49083716|gb|AAT51120.1| PA4569 [synthetic construct] Length = 323 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 127/321 (39%), Positives = 193/321 (60%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + +D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L L Y+G Sbjct: 4 QAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HT+TLLHDDVVD S LRRG+ A +WGN SVLVGDFL +++F M+ Sbjct: 64 DDLCLLAATIEFLHTSTLLHDDVVDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMRIISQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +AL+ +G LGIAFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I+ Sbjct: 184 ALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT+ + + I G ++L+ + AL T A Y +A L L Sbjct: 244 MRDGTEEQAALVRKAIQQG--GSQDLESVCAAVEAAGALDYTANLARDYAARAIACLDTL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 PD+ ++ +L+E+ +F + R + Sbjct: 302 PDNEYRSALVELSEFAVARTH 322 >gi|127511802|ref|YP_001092999.1| trans-hexaprenyltranstransferase [Shewanella loihica PV-4] gi|126637097|gb|ABO22740.1| Trans-hexaprenyltranstransferase [Shewanella loihica PV-4] Length = 323 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 136/320 (42%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ V+ LI K++ SDV +I + Y+I GGKR+RP+L++ A + Y Sbjct: 3 LNAIRQLADADMKAVDQLIYKQLESDVALINQLGFYIINGGGKRMRPLLSILAARAIAYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA +EFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GEAHLKLAAIVEFIHTASLLHDDVVDESMLRRGRETANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E KS E LE L+ LAEGE+ QL + D +EE Y+ VI KTA LF AA ++ Sbjct: 123 MTELKSMEVLEVLADATNVLAEGEVLQLMNCNDPDTSEESYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A V+ AL YG LG AFQL DD+LDY + +GKNIG+D GKPTLP+I Sbjct: 183 GVLAESSIEVQTALADYGKYLGTAFQLTDDLLDYTADTEALGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + E+ + I G E++ +++ AL TE RA +KA +L Sbjct: 243 AIANGNELERQLIRDAIEKGD-GTEHIDTILNALKQCGALDYTEKRAREEAEKAIRALDL 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDS +K++L+ + + R Sbjct: 302 IPDSDYKQALISLARIAVAR 321 >gi|303250376|ref|ZP_07336575.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253685|ref|ZP_07535552.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650846|gb|EFL81003.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306858921|gb|EFM90967.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 331 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 134/324 (41%), Positives = 203/324 (62%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 7 LEQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAGGGKRIRPLIAVLAANALGYR 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 67 GNKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAENFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AF----QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A ++G + + + +S I +G E + IM E+++L RA QKA D Sbjct: 247 AMHTAQEKGNQAQVDMIRSAIENGG-EREQIPAVLEIMAEHQSLEYAMTRAKQEAQKAVD 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LP+S + ++L+ + + R Sbjct: 306 ALAVLPESEYTQALISLAYLSVDR 329 >gi|237801840|ref|ZP_04590301.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024698|gb|EGI04754.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 319 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 127/317 (40%), Positives = 189/317 (59%), Gaps = 2/317 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDLIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDIRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S E ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMEVMKILSKATRIIAEGEVLQLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + +AL+++G +LG+AFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I Sbjct: 184 ALCKASEAQTEALRTFGDHLGVAFQLVDDLLDYRGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + + I G + E+L+ + AL T A Y +A L L Sbjct: 244 MREGSPEQAALVRQAIQKGGL--EDLESIRNAVESAGALDYTAQLARDYAARAIACLDAL 301 Query: 302 PDSSWKKSLMEVVDFCL 318 P S ++ +L+E+ +F + Sbjct: 302 PPSEYRDALVELSEFAV 318 >gi|71278535|ref|YP_271161.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H] gi|71144275|gb|AAZ24748.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H] Length = 327 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 132/322 (40%), Positives = 192/322 (59%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM VN LI ++ SDV +I + Y++ GGKR+RPMLT+ A Y+ Sbjct: 7 IKAIQALAQSDMAAVNDLIYDQLQSDVALINQLGIYIVNGGGKRMRPMLTVLAARAFAYQ 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD H+ +A IEFIHTATLLHDDVVD+S +RRG+ A ++GN SVLVGDFL +++F M Sbjct: 67 GDKHLEIAAIIEFIHTATLLHDDVVDESNMRRGRETANALFGNSASVLVGDFLYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + ++ LS +AEGE+ QL + TEE Y+ VI KTA LF AA ++ Sbjct: 127 MTKLGDMRIMDILSEATNIVAEGEVLQLMNCNDASTTEESYMQVIYCKTAKLFEAATRLA 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IA + QA+ YG LG AFQLVDD++DY + EMGKN+G+D GKPTLP++ Sbjct: 187 AVIAKQDAKIEQAMADYGKYLGTAFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLY 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G + ++ K I G ++NL+ M E +L T+ +A KA +L Sbjct: 247 AMKHGNEAQQKLIKEAIELGN-GMDNLELILQAMEETGSLRYTQKQAEIEADKAIKALNV 305 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 + DS K++L+ + R + Sbjct: 306 IADSEHKQALISLAHIAANRSH 327 >gi|77461082|ref|YP_350589.1| polyprenyl synthetase [Pseudomonas fluorescens Pf0-1] gi|77385085|gb|ABA76598.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1] Length = 322 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 129/321 (40%), Positives = 193/321 (60%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDGIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDMRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANAMWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMKILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AG +AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I Sbjct: 184 ALAGATAEQSEALRTFGDHLGVAFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G +E+L+ I + + +L T A Y +A L L Sbjct: 244 MREGTPEQAALVRQAIQKG--GIEDLESIRIAVEASGSLEYTAQLARDYVARAIKCLDAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PASEYRDALVELSEFAVARTH 322 >gi|329848574|ref|ZP_08263602.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] gi|328843637|gb|EGF93206.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] Length = 339 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 149/318 (46%), Positives = 205/318 (64%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L +LT DM KVN LI R+ S+V +IP + +LI +GGKRLRP+L +A A + E R D Sbjct: 20 ALVNLTAADMVKVNSLITARMQSEVAVIPALADHLIAAGGKRLRPLLCVAAARLCEVRND 79 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 NH L+ A+EFIHTATLLHDDVVD S+LRRGKVAA L+WG +SVLVGDFL ++AF +++ Sbjct: 80 NHHKLSAAVEFIHTATLLHDDVVDSSSLRRGKVAAHLIWGAPSSVLVGDFLFARAFELMV 139 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 ET S AL+ LS + + +GE+ QL + +L++++ DY+ +I SKTA LFSAA E ++ Sbjct: 140 ETGSLRALDILSKASAVITQGEVLQLMKAFDLNLSQADYIEIISSKTAALFSAASESGAV 199 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AG AL SYG+NLG+AFQ+ DDVLDY+G+ ++GKN G+DF GK TLP+ILA Sbjct: 200 AAGASEDKITALYSYGLNLGLAFQIQDDVLDYQGDAADLGKNAGDDFAEGKSTLPLILAM 259 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 Q + FW TI + K + A +M + AL A +Y KA+ SL Sbjct: 260 QATKGTQDAFWARTIGERKQQDGDFAMAQDLMVSSGALDQARALARAYADKARASLSLFE 319 Query: 303 DSSWKKSLMEVVDFCLQR 320 W+ +L + + + R Sbjct: 320 PGPWRTALENLALYSVDR 337 >gi|260581709|ref|ZP_05849506.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae NT127] gi|260095302|gb|EEW79193.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae NT127] Length = 329 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 126/317 (39%), Positives = 193/317 (60%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEVQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 252 HGNAQQAALIREAIEQGG-KREAIDEVLAIMAEHKSLDYAMNRAKEEAQKAVDAIEILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 311 SEYKQALISLAYLSVDR 327 >gi|332994564|gb|AEF04619.1| Geranylgeranyl pyrophosphate synthase [Alteromonas sp. SN2] Length = 324 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 129/323 (39%), Positives = 194/323 (60%), Gaps = 2/323 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L+ DM+ VN LI +++ SDV +I + Y++ SGGKRLRP+LT+ +A + Sbjct: 3 INQIRALSNDDMQAVNHLIQQQVDSDVALINQLGFYIVNSGGKRLRPLLTVLSARAMGIE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 +H LA +EFIHTATLLHDDVVD+S +RRG+ A V+GNQ SVLVGDFL +++F M Sbjct: 63 NADHHTLAAIVEFIHTATLLHDDVVDESTMRRGRETANAVFGNQASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ K ++ LS +AEGE+ QL + TE Y VI KTA LF AA +++ Sbjct: 123 MVSLKRMRVMDILSEATNQIAEGEVLQLMNCNDASTTEARYFDVIYGKTARLFEAATQLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ +V A++ YG +LG AFQL DD+LDY + +EMGKN G+D GKPTLP++ Sbjct: 183 AVLTDQPENVEHAMQEYGKHLGTAFQLADDILDYMADSDEMGKNAGDDLAEGKPTLPLLY 242 Query: 241 AF-QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A ++ +K + I + +L + IM AL T A + + A DSL Sbjct: 243 AMWNTDSEEDKALIRDAIEQSN-GLPHLTRIQQIMESTGALDYTRTCANNEVKMAIDSLS 301 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 +PDS +K++L+ + ++R + Sbjct: 302 IIPDSPYKEALIALAHISVERTS 324 >gi|84500217|ref|ZP_00998483.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597] gi|84392151|gb|EAQ04419.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597] Length = 331 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 146/321 (45%), Positives = 202/321 (62%), Gaps = 1/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L D+ VN LI +R+ S IP+V +L+ +GGKR+RPMLTLA A + Y Sbjct: 10 EAIAALLADDLGAVNALIRERMASRHAPRIPEVTAHLVEAGGKRIRPMLTLAAARLCGYD 69 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L ++AF + Sbjct: 70 GPYHIHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQL 129 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + L LS A T+AEGE+ QLS +++L TEE YL VI+ KTA LFSAA E Sbjct: 130 MVEPGNLRVLSILSDAAATIAEGEVLQLSAAQDLKTTEETYLQVIRGKTAALFSAATEAG 189 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 IAG + +AL YG LGIAFQ+ DD+LD+ G+ + GKN+G+DFR K TLP+I Sbjct: 190 GEIAGASPAQVRALFDYGDALGIAFQMADDLLDWTGKTDSTGKNVGDDFRERKLTLPLIR 249 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A E+ FW TI G+ + E+L A ++ + AL T A + +AK +L Sbjct: 250 AVAAADDEERAFWTRTIEKGRQNDEDLATARELLDRHGALGSTRETALDWADRAKSALTH 309 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LPD L ++ D+ ++RL Sbjct: 310 LPDHDLTAHLSDLADYVVERL 330 >gi|15599765|ref|NP_253259.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1] gi|107099768|ref|ZP_01363686.1| hypothetical protein PaerPA_01000786 [Pseudomonas aeruginosa PACS2] gi|116052711|ref|YP_793028.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|218893664|ref|YP_002442533.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58] gi|254238683|ref|ZP_04932006.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719] gi|254244534|ref|ZP_04937856.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192] gi|296391383|ref|ZP_06880858.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAb1] gi|313107214|ref|ZP_07793413.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016] gi|9950815|gb|AAG07957.1|AE004870_8 octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1] gi|115587932|gb|ABJ13947.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|126170614|gb|EAZ56125.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719] gi|126197912|gb|EAZ61975.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192] gi|218773892|emb|CAW29706.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58] gi|310879915|gb|EFQ38509.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016] Length = 322 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 127/321 (39%), Positives = 193/321 (60%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + +D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L L Y+G Sbjct: 4 QAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HT+TLLHDDVVD S LRRG+ A +WGN SVLVGDFL +++F M+ Sbjct: 64 DDLCLLAATIEFLHTSTLLHDDVVDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMRIISQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +AL+ +G LGIAFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I+ Sbjct: 184 ALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT+ + + I G ++L+ + AL T A Y +A L L Sbjct: 244 MRDGTEEQAALVRKAIQQG--GSQDLESVCAAVEAAGALDYTANLARDYAARAIACLDTL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 PD+ ++ +L+E+ +F + R + Sbjct: 302 PDNEYRSALVELSEFAVARTH 322 >gi|297787795|pdb|3MZV|A Chain A, Crystal Structure Of A Decaprenyl Diphosphate Synthase From Rhodobacter Capsulatus gi|297787796|pdb|3MZV|B Chain B, Crystal Structure Of A Decaprenyl Diphosphate Synthase From Rhodobacter Capsulatus Length = 341 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 145/319 (45%), Positives = 203/319 (63%), Gaps = 1/319 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L +DM VN LI +R+ S+ IP+V +LI +GGKRLRPMLTLA A ++ Y G Sbjct: 14 LAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYGGP 73 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F ++ Sbjct: 74 FHVHLAATVEFIHTATLLHDDVVDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMT 133 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +T + +E L+ + +AEGE+ QL+ ++NL TE+ YL VI+ KTA LFSAA EV + Sbjct: 134 DTGNMRVMEILANASAVIAEGEVLQLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGI 193 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 I G QAL YG LGIAFQ+VDD+LDY G+ E+GKN G+DFR K T+PVI A Sbjct: 194 IGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGGKSAEIGKNTGDDFRERKLTMPVIKAV 253 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + E+ FWK I G +L+ A +M ++ L T A + A+ +L LP Sbjct: 254 ALADEAERAFWKRVIEKGDQQDGDLEHAMALMTKHGTLEATRLAAIGWTDTARKALAKLP 313 Query: 303 DSSWKKSLMEVVDFCLQRL 321 D ++ L ++ D+ ++R+ Sbjct: 314 DHPLRQMLDDLADYVVERV 332 >gi|119472626|ref|ZP_01614617.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7] gi|119444830|gb|EAW26131.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7] Length = 323 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 191/320 (59%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM VN LI ++ S+V ++ + Y++ SGGKR+RPML + A L Y Sbjct: 3 IKAIQALIESDMNDVNQLIHAQMRSEVALVNQLGLYIVNSGGKRVRPMLAILAAKALGYT 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H+ LA +EFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ +++F + Sbjct: 63 GKDHITLATIVEFIHTATLLHDDVVDESNLRRGTPTANAEFGNAASVLVGDFIYTRSFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + ++ L+ +AEGE+ QL + D TE Y+ VI SKTA LF AA ++ Sbjct: 123 MVGLGKMQIMQILADATNIIAEGEVLQLMNCNDPDTTEASYMQVIYSKTAKLFEAATGLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I + AL YGM+LG AFQLVDDVLDY + N++GKNIG+D GKPTLP+I Sbjct: 183 AIITNNDEATLNALNLYGMHLGTAFQLVDDVLDYNADANQLGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G + + I +E+L++ +++ AL T +A KA L Sbjct: 243 AMQHGNAHQTQLIRDAIEHSN-GMEHLEEILSTLKQTNALEFTMQKAELEADKAIACLDF 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K +L+ + + R Sbjct: 302 LPESEYKHALVSLARIAVDR 321 >gi|261365500|ref|ZP_05978383.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996] gi|288566037|gb|EFC87597.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996] Length = 324 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 128/322 (39%), Positives = 198/322 (61%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ +VN +I K + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLSRVNEVINKAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKSVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 GDKLYALAAMVEFIHTSTLLHDDVVDESDLRRGRETANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++++ S LE ++ +AEGE+ QL N D+TE Y+ VI+ KTA LF AA +V Sbjct: 125 MVDSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEAQYVQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I Sbjct: 185 AILGNAPPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G+K+ + + + + S + +K + + AL + A ++A SL Sbjct: 245 LMRNGSKQVADDVRHALENADRS--SFQKIHDYVVRSDALTYSISEARKAVEQAVASLAV 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K++++++ + L R++ Sbjct: 303 LPDSEVKQAMIQLAEESLARVS 324 >gi|319775186|ref|YP_004137674.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047] gi|317449777|emb|CBY85984.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047] Length = 329 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 128/317 (40%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGSN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA DS+ LP+ Sbjct: 252 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDSIAILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +KK+L+ + + R Sbjct: 311 SDYKKALISLAYLSVDR 327 >gi|149912227|ref|ZP_01900805.1| octaprenyl-diphosphate synthase [Moritella sp. PE36] gi|149804686|gb|EDM64738.1| octaprenyl-diphosphate synthase [Moritella sp. PE36] Length = 323 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 131/322 (40%), Positives = 199/322 (61%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L+ +DM+ VN LIL R+ SDV ++ V Y++ GGKR+RP++ +A L Y+ Sbjct: 3 IKAIQALSKQDMDAVNELILARLQSDVALVNQVGYYIVNGGGKRIRPLIATLSARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV +A IEFIHT+TLLHDDVVD+S +RRG+ A +GN SVLVGDFL S++F M Sbjct: 63 GQQHVDVAAIIEFIHTSTLLHDDVVDESDMRRGRKTANAAFGNAASVLVGDFLYSRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + + + ++ LS +AEGE+ QL + D E+ Y+ VI KTA LF AA +++ Sbjct: 123 MAKLNNSKIIDILSDATNVIAEGEVLQLMNCNDADTDEKRYMDVIYYKTAKLFEAATQLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IA + QA+ YG++LG AFQL+DDV+DY + EMGKN+G+D GKPTLP+I Sbjct: 183 AVIAEQPADIEQAMIDYGVHLGAAFQLIDDVMDYTSDAQEMGKNVGDDLAEGKPTLPLIH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT++E + I ++NL+ I+ N +L +A + A ++ Sbjct: 243 AMAHGTEQEALMVREAIEKMN-GMDNLEAILAILERNGSLNYCFDKAQQEAELAVKAIAV 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+S +K++L+ + R N Sbjct: 302 LPESEYKQALISLAYIAANRSN 323 >gi|294678700|ref|YP_003579315.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003] gi|77862362|gb|ABB04465.1| decaprenyl diphosphate synthase [Rhodobacter capsulatus] gi|294477520|gb|ADE86908.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003] Length = 333 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 145/319 (45%), Positives = 203/319 (63%), Gaps = 1/319 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L +DM VN LI +R+ S+ IP+V +LI +GGKRLRPMLTLA A ++ Y G Sbjct: 14 LAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYGGP 73 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F ++ Sbjct: 74 FHVHLAATVEFIHTATLLHDDVVDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMT 133 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +T + +E L+ + +AEGE+ QL+ ++NL TE+ YL VI+ KTA LFSAA EV + Sbjct: 134 DTGNMRVMEILANASAVIAEGEVLQLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGI 193 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 I G QAL YG LGIAFQ+VDD+LDY G+ E+GKN G+DFR K T+PVI A Sbjct: 194 IGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGGKSAEIGKNTGDDFRERKLTMPVIKAV 253 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + E+ FWK I G +L+ A +M ++ L T A + A+ +L LP Sbjct: 254 ALADEAERAFWKRVIEKGDQQDGDLEHAMALMTKHGTLEATRLAAIGWTDTARKALAKLP 313 Query: 303 DSSWKKSLMEVVDFCLQRL 321 D ++ L ++ D+ ++R+ Sbjct: 314 DHPLRQMLDDLADYVVERV 332 >gi|30249867|ref|NP_841937.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] gi|30180904|emb|CAD85826.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] Length = 322 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 202/320 (63%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + ++ KDM +V+ +I +++ S V ++ V +Y+I SGGKRLRP L + A + +Y+ Sbjct: 3 IESIRNVIAKDMGEVDNVIQQKLHSQVALVRQVSEYIIHSGGKRLRPALVILAAGLFDYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA +EFIHTATLLHDDVVD+S LRR + A ++GN SVLVGDFL S+AF M Sbjct: 63 GLHHHNLAAVVEFIHTATLLHDDVVDESELRRNQATANALFGNAASVLVGDFLYSRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + +E L+ T+AEGE+ QL ++ DV EE+YL VI+ KTA LF AA + Sbjct: 123 MVEVGNMRVMEVLADATNTIAEGEVLQLLNCRDPDVEEENYLQVIRFKTAKLFEAAARLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G + +AL +YGM+LG AFQLVDD+LDY G + GKN+G+D GKPTLP+I Sbjct: 183 AILGGATPAEEEALAAYGMHLGTAFQLVDDLLDYSGNDQDTGKNLGDDLAEGKPTLPLIF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G + + + I G + + I++E+ AL + A + A ++ Sbjct: 243 AMRSGIPEQVDTVRHAIETG--GKDGFEPILKIIQESGALDYAKQCAQNEANMAISAITA 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 + DS +K+ L+E+ +F + R Sbjct: 301 IRDSIYKQCLLELAEFAITR 320 >gi|254475222|ref|ZP_05088608.1| decaprenyl diphosphate synthase [Ruegeria sp. R11] gi|214029465|gb|EEB70300.1| decaprenyl diphosphate synthase [Ruegeria sp. R11] Length = 406 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 144/320 (45%), Positives = 205/320 (64%), Gaps = 1/320 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 ML ++M VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A + Y G Sbjct: 86 MLAATLSEEMAAVNTLIRTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYSG 145 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DNHV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F ++ Sbjct: 146 DNHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLM 205 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +ET S L+ L+ + T+AEGE+ Q++ + +L E+ YL V++ KTA LFSAA + Sbjct: 206 VETGSLRVLDILANASATIAEGEVLQMTAASDLATDEDIYLQVVRGKTAALFSAATQAGG 265 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IA + AL +YG LGIAFQ+ DD+LDY+G+ + GKN+G+DFR K TLPVI A Sbjct: 266 VIAEASEAEVDALYAYGDALGIAFQIADDLLDYQGDSSATGKNVGDDFRERKLTLPVIKA 325 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T E+ FW TI G+ +L A +M + L T A ++ KA+D+L L Sbjct: 326 VAQATAEERAFWVRTIEKGRQDEGDLDHALALMDKYDTLGATRRDAMAWVAKAQDALTAL 385 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 P+ ++ L ++ D+ + RL Sbjct: 386 PEDPIRQMLHDLADYVVARL 405 >gi|322418219|ref|YP_004197442.1| poluprenyl synthetase [Geobacter sp. M18] gi|320124606|gb|ADW12166.1| Polyprenyl synthetase [Geobacter sp. M18] Length = 322 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 125/321 (38%), Positives = 191/321 (59%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L +D++ V K + SDV +I V +Y++ SGGKR+RP L L A + Y Sbjct: 1 MDAALALIGEDLKNVELQFKKDLQSDVPLIRKVGEYVLSSGGKRIRPALVLLAARLCGYD 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G V LA +EFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F + Sbjct: 61 GSRSVPLASVVEFIHTATLLHDDVVDNANLRRGLASANTLWGNEASVLVGDFLFSKSFSL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ L+ L+ +AEGE+ QL + +LD+T E Y+ V++SKTA+L SAA EV Sbjct: 121 MVTDGDLGILKVLADATTMIAEGEVLQLVCTSDLDITVERYIEVVRSKTAILLSAACEVG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G + +RQA+ YGM+LGIAFQL+DD LDY + GK+IG D GK TLP+I Sbjct: 181 AILGGAEPGLRQAVADYGMDLGIAFQLMDDTLDYTASQEQFGKSIGHDLEEGKITLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++ + E++ S + +S E+ + +++ + T A + K L Sbjct: 241 TLKQCSDEERDLIASVVEKDLLSDEDFELVLALVQRYGGIEHTVASAGEHVALCKKHLEK 300 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 P S ++++ ++ D+ + R+ Sbjct: 301 FPPSQAREAMADLADYVVTRV 321 >gi|148826474|ref|YP_001291227.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittEE] gi|148716634|gb|ABQ98844.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittEE] Length = 323 Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats. Identities = 126/317 (39%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 6 IQKLADPDMQKVNQNILAQLNSDVSLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGAN 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 66 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 126 LESLKILGIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 186 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 246 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 305 SEYKQALISLAYLSVDR 321 >gi|152980282|ref|YP_001354685.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille] gi|151280359|gb|ABR88769.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille] Length = 334 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 198/319 (62%), Gaps = 2/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 +L D+ V+ +I +++ S+V ++ + Y+I +GGKR+RP+L L A YRG Sbjct: 16 NLLIQPIAADLNAVDTVIRQKLHSEVALVNQIADYIISAGGKRIRPVLVLLMANAYGYRG 75 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +H LA +EFIHTATLLHDDVVD+S+LRRG+ A ++GN SVLVGDFL S+AF M+ Sbjct: 76 TDHHQLAAVVEFIHTATLLHDDVVDESSLRRGRKTANALFGNAASVLVGDFLYSRAFQMM 135 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + ++ L+ +AEGE+ QL + DV+EE Y VI+SKTA LF AA ++ + Sbjct: 136 VSVGDIRIMQILADATNVIAEGEVLQLLNMHDPDVSEERYTQVIRSKTAKLFEAAAQLGT 195 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 LIAG + +A YG +LG AFQL+DDVLDY G+ +++GKN+G+D R GK TLP+I Sbjct: 196 LIAGASDDEIEAAAEYGRSLGTAFQLIDDVLDYSGQADDIGKNVGDDLREGKATLPLIYL 255 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT ++ +S I +G ++ + + AL T+ +A +A S+ L Sbjct: 256 MEHGTPEQRELVRSCIENG--DEQHFDAVLQAVTTSGALDYTKRKAEEASARATASIAGL 313 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PD+++K +L+++ F + R Sbjct: 314 PDNAFKDALLKLSAFAVNR 332 >gi|163749221|ref|ZP_02156471.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99] gi|161331291|gb|EDQ02180.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99] Length = 323 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM+ VN LI ++ SDV +I + Y+I GGKR+RP+L++ A ++Y+ Sbjct: 3 LNAIRQLADSDMQDVNKLIYAQLESDVALINQLGFYIINGGGKRMRPLLSILAARAIDYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ LA +EFIHTA+LLHDDVVD+S LRRG+ A ++GN SVLVGDFL +++F M Sbjct: 63 GVAHLKLAAIVEFIHTASLLHDDVVDESMLRRGRDTANALFGNSASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S + L+ L+ LAEGE+ QL + D +EE Y+ VI KTA LF AA ++ Sbjct: 123 MTELGSMKVLKMLADATNVLAEGEVLQLMNCNDPDTSEESYMRVIYCKTAKLFEAATRLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A ++ AL YG LG AFQL DD+LDY E+GKNIG+D GKPTLP+I Sbjct: 183 GVLADSPIEIQTALADYGKYLGTAFQLTDDLLDYTANTEELGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A GT++E+ + + G +N+++ + + AL T RA KA +L C Sbjct: 243 AIAHGTEKEQALIRKAVELGD-GTQNIEEILVALNNCGALKYTHDRALEESDKAVAALAC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDS +K++L+ + ++R Sbjct: 302 IPDSEYKQALISLAKIAVER 321 >gi|20429105|emb|CAD24417.1| decaprenyl diphosphate synthase [Paracoccus zeaxanthinifaciens] Length = 333 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 150/322 (46%), Positives = 207/322 (64%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 + L + +ME VN LI +R+ S IP+V +LI +GGKRLRPMLTLA A +L Y Sbjct: 11 LDRLAEALAPEMEAVNALIRERMASRHAPRIPEVTAHLIEAGGKRLRPMLTLAAAKLLGY 70 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F Sbjct: 71 GGPYHVHLAATVEFIHTATLLHDDVVDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQ 130 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 +++E S LE LS A T+AEGE+ QL+ +++L E+ YL V++ KTA LFSAA EV Sbjct: 131 LMVEPGSMRTLEILSNAAATIAEGEVLQLTAAQDLATNEDIYLQVVRGKTAALFSAATEV 190 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +IAGV ++ +AL YG LGIAFQ+VDD+LDY G + KN G+DFR K TLPVI Sbjct: 191 GGVIAGVPDAQVRALFDYGDALGIAFQIVDDLLDYGGTAEAIDKNTGDDFRERKLTLPVI 250 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A R T E+ FW TI G +L+ A ++ + A+ D A + +A+ SL+ Sbjct: 251 KAVARATPEERAFWSRTIEKGDQKDGDLEHALELLARHGAMADARRDALDWAARARASLQ 310 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 LP+ + L ++ DF ++R+ Sbjct: 311 ILPEHPIRDMLSDLADFVVERI 332 >gi|288941872|ref|YP_003444112.1| trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180] gi|288897244|gb|ADC63080.1| Trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180] Length = 322 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 131/321 (40%), Positives = 188/321 (58%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D + V+ LIL+R+ SDV +I + Y++ SGGKRLRP+ L A Y Sbjct: 3 LSRIRQPVAEDTKAVDALILRRLQSDVVLINQIGHYIVNSGGKRLRPLSVLLAARACGYT 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA +EFIHT+TLLHDDVVD S LRR + A +VWGN SVLVGDFL S++F M Sbjct: 63 GERHIDLAAIVEFIHTSTLLHDDVVDGSELRRNRETANVVWGNDASVLVGDFLYSRSFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ + +E L+ +AEGE+ QL ++ D E Y+ VI KTA LF A + Sbjct: 123 MVDVGNMRVMEVLAHATNRIAEGEVLQLLNERDPDTDEARYMEVISRKTATLFEAGTRLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IA + +A++ YG+ LGIAFQLVDD LDY + E+GKN+G+D GKPTLP+I Sbjct: 183 AVIAESPPEIEEAIREYGLRLGIAFQLVDDALDYSVDNAELGKNVGDDLDEGKPTLPIIR 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q GT ++ + I G + ++ + A+ T A SY +AK +L Sbjct: 243 AMQVGTPEQRALLRDAIEHG--GRDRIESVTAAIASTDAIDYTTQLAQSYAAQAKKALER 300 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP S +L + DF + R Sbjct: 301 LPASPANDALALLADFAVART 321 >gi|114319994|ref|YP_741677.1| trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1] gi|114226388|gb|ABI56187.1| Trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1] Length = 322 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 137/321 (42%), Positives = 197/321 (61%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +L DM VN LI +R+ S+V +I + Y++ SGGKRLRP+L L A YR Sbjct: 3 IDAIRNLAADDMAAVNRLIQERLSSEVVLIDQMGHYIVNSGGKRLRPLLVLLAARAAGYR 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H+ LA +EFIHTATLLHDDVVD+S LRRG+ A +WGN+ +VLVGDFL ++AF M Sbjct: 63 GEHHIKLAAVVEFIHTATLLHDDVVDESTLRRGQDTANSIWGNEAAVLVGDFLYTRAFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E ++ ++ T+AEGE+ QL + DV+E Y VI KTA LF AA + Sbjct: 123 MVEVGLLPIMQVMARTTNTIAEGEVMQLLNCHDPDVSEARYRDVIYRKTASLFEAACCLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 IAG+ + L +YG++LG A+QLVDD LDY G+ E+GKNIG+D GKPT+P+I Sbjct: 183 GTIAGLPQAQTDHLAAYGLHLGTAYQLVDDALDYAGKAEEIGKNIGDDLAEGKPTMPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A RG+ E+ + I++G IS + + A+ T+ A ++A + L Sbjct: 243 AMARGSAEERQVIREAISEGGIS--RIAAVQQAIENTGAIPYTQRLARDEAEEAVNRLAH 300 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LPDS WK++L + F + R Sbjct: 301 LPDSEWKQALEALARFSVART 321 >gi|114330832|ref|YP_747054.1| farnesyltranstransferase [Nitrosomonas eutropha C91] gi|114307846|gb|ABI59089.1| Farnesyltranstransferase [Nitrosomonas eutropha C91] Length = 322 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 200/320 (62%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + ++ KDM +V+ +I +++ S V ++ V +Y+I SGGKRLRP L + A + +Y+ Sbjct: 3 IESIRNVIAKDMGEVDNVIQQKLHSQVVLVRQVSEYIIHSGGKRLRPALVILAAGLYDYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA +EFIHTATLLHDDVVD+S LRR + A ++GN SVLVGDFL S+AF M Sbjct: 63 GTHHYNLAAVVEFIHTATLLHDDVVDESQLRRNQATANALFGNAASVLVGDFLYSRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + +E L+ T+AEGE+ QL ++ DV EE+YL VI+ KTA LF AA + Sbjct: 123 MVEVDNMRVMEVLADATNTIAEGEVLQLLNCRDPDVEEENYLQVIRFKTAKLFEAAGRLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G + +AL +YGM+LG AFQLVDD+LDY G ++ GKN+G+D GKPTLP+I Sbjct: 183 AILGGATPAEEEALAAYGMHLGTAFQLVDDLLDYSGNDHDTGKNLGDDLAEGKPTLPLIF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + N + I G + I+++ AL + A A + Sbjct: 243 AMRAGTTDQANTVRHAIESG--GKDGFGPVLEIIQKTGALDYAKQCAQKEANMATSVIST 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L DS +K+ L+E+ +F + R Sbjct: 301 LRDSIYKQCLLELAEFAVSR 320 >gi|90420152|ref|ZP_01228060.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans SI85-9A1] gi|90335486|gb|EAS49236.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans SI85-9A1] Length = 337 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 166/322 (51%), Positives = 226/322 (70%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +T DM +VN LIL S+VE+IP++ ++LI SGGKRLRPMLT+A+AL +YR Sbjct: 16 IEPMIAVTAPDMARVNDLILAMAGSNVELIPEIAEHLISSGGKRLRPMLTIASALAHDYR 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA ++EF+HTATLLHDDVVD+S LRRGK AR +WGNQ SVLVGDFLL QAF Sbjct: 76 GDAHVKLAASVEFMHTATLLHDDVVDESDLRRGKKTARTIWGNQASVLVGDFLLGQAFKT 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S AL+ LS + +AEGE+ QLS +K++ +E DYL VI +KTA LF+AA EV Sbjct: 136 MVEVGSLTALDILSTASSVIAEGEVWQLSAAKHMTTSEADYLAVIDAKTAALFAAAAEVG 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + R A++ YG +LG+AFQLVDDVLDY G +GKN G+DFR GK TLPVIL Sbjct: 196 PVIAGAGEAERTAMRDYGRSLGLAFQLVDDVLDYGGTAAALGKNTGDDFREGKITLPVIL 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+Q G EK FW+ + G+ + L +A ++ ++ AL +T RA YG+ A + Sbjct: 256 AYQAGDDTEKAFWREAMEGGRNDDKALARATALIHQHGALEETVQRARQYGEAAYAAASG 315 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S + +++ VV+FC+ R++ Sbjct: 316 LPQSPSRDAMLGVVEFCIDRVS 337 >gi|238898823|ref|YP_002924505.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466582|gb|ACQ68356.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 310 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 129/309 (41%), Positives = 196/309 (63%), Gaps = 1/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M +N +I+ ++ SD+E++ + Y+I GGKR+RPM+++ +A L Y+GD H+++A I Sbjct: 1 MAALNVIIIDQMHSDIELVNQLSAYIINGGGKRIRPMISILSARALNYKGDQHIIVAALI 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD S LRRGK A V+GN SVLVGDF+ ++AF M+ + S L+ Sbjct: 61 EFIHTATLLHDDVVDKSDLRRGKKTANTVFGNSASVLVGDFIYTRAFQMMTDLGSMRILK 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +S ++EGE++QL N+++TE DY+ VI SKTA LF AA + ++++A Sbjct: 121 VMSSATNVISEGEVQQLMYCNNVNITEYDYMKVIYSKTARLFEAASQSAAILAKASPEQE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 AL+SYG LG +QL+DD+LDY + N GK+IG+D GK TLP++ A GT+ +K Sbjct: 181 SALQSYGCYLGTTYQLIDDLLDYNSKGNLFGKDIGDDLDEGKATLPLLHAMHHGTEEQKQ 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 I G + ++L + IM++ +L T RA KA +L+ LP +S++ +L Sbjct: 241 MISFAIKRGN-ARQSLPQILNIMKQCGSLGYTLNRAKEEANKAISALQILPKNSYRTALE 299 Query: 312 EVVDFCLQR 320 + F ++R Sbjct: 300 SLAYFAVKR 308 >gi|163741857|ref|ZP_02149247.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10] gi|161385030|gb|EDQ09409.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10] Length = 332 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 145/320 (45%), Positives = 203/320 (63%), Gaps = 1/320 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 ML +M VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A + Y G Sbjct: 12 MLAATLSDEMAAVNTLIQTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYSG 71 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DNHV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F ++ Sbjct: 72 DNHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLM 131 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +ET S L+ L+ + T+AEGE+ Q++ + +L EE YL V++ KTA LFSAA + Sbjct: 132 VETGSLRVLDILANASATIAEGEVLQMTAASDLATDEEIYLQVVRGKTAALFSAATQAGG 191 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A + AL +YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI A Sbjct: 192 VVANAPETQIDALFAYGDALGIAFQIADDLLDYQGDSAATGKNVGDDFRERKLTLPVIKA 251 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T E+ FW TI G+ +L A +M + L T + A + KA+D+L L Sbjct: 252 VAQATAEERGFWVRTIEKGRQDEGDLDHALALMDKYGTLTATRHDAMDWVGKAQDALTAL 311 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 PD ++ L ++ D+ + RL Sbjct: 312 PDDPIRQMLHDLADYVVARL 331 >gi|309973622|gb|ADO96823.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2846] Length = 329 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 126/317 (39%), Positives = 194/317 (61%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + G N Sbjct: 12 IQKLADPDMQKVNQNILAQLNSDVSLIGQLGFYIVQGGGKRIRPLIAVLAARSLGFEGAN 71 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF +V + Sbjct: 72 SITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQ 131 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L ++ LAEGE++QL + + +E +Y+ VI SKTA LF A + ++++ Sbjct: 132 LESLKILGIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIV 191 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + +AL+ YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ A + Sbjct: 192 AGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGKNVGDDLAEGKPTLPLLHAMR 251 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + I G E + + IM E+++L RA QKA D++ LP+ Sbjct: 252 HGNAQQAALIREAIEQGG-KREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPE 310 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+ + + R Sbjct: 311 SEYKQALISLAYLSVDR 327 >gi|253995893|ref|YP_003047957.1| trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8] gi|253982572|gb|ACT47430.1| Trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8] Length = 322 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 124/318 (38%), Positives = 191/318 (60%), Gaps = 2/318 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 +++ DM V+ I + + S+V ++ V +Y+I SGGKRLRPML L A + Sbjct: 5 IIQSCINDDMRMVDTTIRQSLHSEVALVNQVAEYIINSGGKRLRPMLVLLAAGLFGEIQT 64 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 H LA +EFIHTATLLHDDVVD+S+ RRG+ A ++GN SVLVGDF+ S+AF M++ Sbjct: 65 QHHQLAAVVEFIHTATLLHDDVVDESSKRRGQSTANALFGNAASVLVGDFVYSRAFQMMV 124 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 ++ +E LS +AEGE+ QL N D++++ YL VI KTA LF AA + ++ Sbjct: 125 AVQNMRVMEVLSNATNVIAEGEVLQLLNVNNADISDKAYLQVIHYKTAKLFEAATRLGAI 184 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 I+ AL +YGM+LG AFQL+DD+LD G ++GKN+G+D GKPTLP++ A Sbjct: 185 ISEASAKDEAALTAYGMHLGTAFQLIDDILDLSGNSEDIGKNLGDDLAEGKPTLPLLYAM 244 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + + ++ I G + E+L + I+ + AL + A + + + ++ P Sbjct: 245 RNSNTEQSQLIRNAIEQGGL--EHLTQVVEIVNNSGALDHVKKIAEAESAQCRAAIAHFP 302 Query: 303 DSSWKKSLMEVVDFCLQR 320 +S +K++L+E+ DF + R Sbjct: 303 ESKFKQALIELADFAVTR 320 >gi|330811830|ref|YP_004356292.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379938|gb|AEA71288.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 322 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 193/321 (60%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + D V+ +I K++ S V ++ + Y+ +GGKRLRP+L L L G Sbjct: 4 QAFYRAVADDFSAVDGIIKKQLTSRVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A +WGN SVLVGDFL S++F M+ Sbjct: 64 DDMRLLAATIEFLHTATLLHDDVVDMSGMRRGRSTANAMWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMKILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AG +AL+++G +LG+AFQLVDD+LDY+G+ +GKN+G+D GKPTLP+I Sbjct: 184 ALAGASAEQSEALRTFGDHLGVAFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT + + I G +E+L+ + + + +L T A Y +A L L Sbjct: 244 MREGTPEQAALVRQAIQKG--GIEDLESIRVAVEASGSLDYTANLARGYVARAIKCLDAL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P S ++ +L+E+ +F + R + Sbjct: 302 PASEYRDALVELSEFAVARTH 322 >gi|225075990|ref|ZP_03719189.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens NRL30031/H210] gi|224952705|gb|EEG33914.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens NRL30031/H210] Length = 324 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 128/322 (39%), Positives = 191/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + + Sbjct: 5 LPYFQRHLPDDLAKVNVVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKAVGHD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE YL VI+ KTA LF AA +V Sbjct: 125 MVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYLQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G++ N + + + S +K + + AL + A KA SL Sbjct: 245 LMRNGSELAANDVRHALENADRS--YFEKIHDYVVNSDALPYSISEAKKAVDKAIASLNV 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K +++++ L R++ Sbjct: 303 LPDSEVKDAMIQLAKESLARVS 324 >gi|292486819|ref|YP_003529689.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430] gi|292900783|ref|YP_003540152.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946] gi|291200631|emb|CBJ47763.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946] gi|291552236|emb|CBA19273.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430] gi|312170887|emb|CBX79146.1| octaprenyl diphosphate synthase [Erwinia amylovora ATCC BAA-2158] Length = 324 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 135/322 (41%), Positives = 194/322 (60%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59 ++ + +LT +DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + A + +Y Sbjct: 3 LEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAINDY 62 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G H+ +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF Sbjct: 63 AGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 122 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M+ S + L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + Sbjct: 123 MMTSLGSLKVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQS 182 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 S+++AG + QAL+ YG +G AFQL+DD+LDY + +GKN+G+D GKPTLP++ Sbjct: 183 SAILAGASATEEQALQDYGRYIGTAFQLIDDLLDYSADGETLGKNVGDDLSEGKPTLPLL 242 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + GT + + +S I +G L+ M + +L T A KA +L Sbjct: 243 HAMRNGTPEQASMIRSAIEEGN-GRHLLESVLETMNQCGSLEWTRNAAEKEADKAIAALA 301 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 LPDS W+ +L + +QR Sbjct: 302 ALPDSPWRSALEALAHMSVQRT 323 >gi|152985492|ref|YP_001350541.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7] gi|150960650|gb|ABR82675.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7] Length = 322 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 127/321 (39%), Positives = 193/321 (60%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + +D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L L Y+G Sbjct: 4 QAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HT+TLLHDDVVD S LRRG+ A +WGN SVLVGDFL +++F M+ Sbjct: 64 DDLCLLAATIEFLHTSTLLHDDVVDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S + +S +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMRIISQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +AL+ +G LGIAFQLVDD+LDYRG+ +GKN+G+D GKPTLP+I+ Sbjct: 184 ALCRAGEEQAEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT+ + + I G ++L+ + AL T A Y +A L L Sbjct: 244 MRDGTEEQAALVRKAIQQG--GSQDLESVCAAVEAAGALDYTANLARDYAARAIACLESL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 PD+ ++ +L+E+ +F + R + Sbjct: 302 PDNEYRAALVELSEFAVARTH 322 >gi|239995268|ref|ZP_04715792.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii ATCC 27126] Length = 324 Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats. Identities = 128/323 (39%), Positives = 190/323 (58%), Gaps = 2/323 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L+ DM+ VN LI +++ SDV +I + Y++ SGGKRLRP+LT+ +A + Sbjct: 3 IDQIRALSNDDMQAVNQLIQQQVDSDVALINQLGFYIVNSGGKRLRPLLTVLSARAMGID 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 ++H LA +EFIHTATLLHDDVVD+S +RRG+ A ++GNQ SVLVGDFL +++F M Sbjct: 63 NNDHHTLAAIVEFIHTATLLHDDVVDESTMRRGRETANAIFGNQASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ K +E LS +AEGE+ QL + TE Y VI KTA LF AA +++ Sbjct: 123 MVSLKRMRVMEILSEATNQIAEGEVLQLMNCNDPSTTEARYFDVIYGKTARLFEAATQLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + A++ YG +LG AFQL DD+LDY + EMGKN G+D GKPTLP++ Sbjct: 183 AVLTDQNEHIEHAMQEYGKHLGTAFQLADDILDYMADSEEMGKNAGDDLAEGKPTLPLLY 242 Query: 241 AFQRG-TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A +K + I + +L + IM E AL T A Q A +SL Sbjct: 243 AMWHARNDDDKALIQEAIEQSN-GLPHLTRIQGIMEETGALDYTRECAQKEVQMAINSLN 301 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 + DS +K++L+ + ++R + Sbjct: 302 AIEDSEYKEALIALAHISIERTS 324 >gi|315127756|ref|YP_004069759.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas sp. SM9913] gi|315016270|gb|ADT69608.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas sp. SM9913] Length = 323 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 198/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM VN LI ++ SDV ++ + Y++ SGGKR+RPML + A L Y+ Sbjct: 3 IKAIQALIESDMNDVNQLIHAQMRSDVALVNQLGLYIVNSGGKRVRPMLAILAAKALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H+ LA IEFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ +++F + Sbjct: 63 GKDHITLATIIEFIHTATLLHDDVVDESNLRRGTPTANAEFGNAASVLVGDFIYTRSFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + ++ L+ +AEGE+ QL + D TE Y+ VI SKTA LF AA ++ Sbjct: 123 MVGLGKMQIMQVLADATNIIAEGEVLQLMNCNDPDTTEASYMQVIYSKTAKLFEAATGLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I +SV +AL YGM+LG AFQLVDDVLDY + +++GKNIG+D GKPTLP+I Sbjct: 183 AIITDQDDSVLEALNLYGMHLGTAFQLVDDVLDYNADADQLGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G++ + + I + +E+L + ++ AL T +A KA L C Sbjct: 243 AMQHGSEHQTQLIRDAI-EHCNGMEHLDEILAALKHTNALEFTMKKAEQEANKAIACLDC 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L +SS+K++L+ + + R Sbjct: 302 LAESSYKQALISLARIAVDR 321 >gi|332531718|ref|ZP_08407603.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332038694|gb|EGI75136.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 323 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 130/320 (40%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM VN LI ++ SDV ++ + Y++ SGGKR+RPML + A L Y+ Sbjct: 3 IKAIQALIESDMNDVNQLIHAQMRSDVALVNQLGLYIVSSGGKRVRPMLAILAAKALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H+ LA +EFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ +++F + Sbjct: 63 GKDHITLATIVEFIHTATLLHDDVVDESNLRRGTPTANAEFGNAASVLVGDFIYTRSFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + ++ L+ +AEGE+ QL + D TE Y+ VI SKTA LF AA ++ Sbjct: 123 MVGLGKMQIMQVLADATNIIAEGEVLQLMNCNDPDTTEASYMQVIYSKTAKLFEAATGLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I + AL YGM+LG AFQLVDDVLDY + ++GKNIG+D GKPTLP+I Sbjct: 183 AIITEQDQATLDALNLYGMHLGTAFQLVDDVLDYNADAEQLGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G++++ + I +E+L++ +++ AL T +A +KA L Sbjct: 243 AMQHGSEQQTLLIRDAIEHSN-GMEHLEEILTALKQTNALEFTMQKAELEAEKAIACLDF 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L +S +K++L+ + + R Sbjct: 302 LAESDYKQALISLARIAVDR 321 >gi|88798952|ref|ZP_01114534.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297] gi|88778432|gb|EAR09625.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297] Length = 322 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 140/319 (43%), Positives = 193/319 (60%), Gaps = 2/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K + D E VN I + + SDV M+ V +Y+I SGGKR+RP+L L + Sbjct: 4 KAVFSTVSSDFEAVNSTIHRYLASDVPMVEKVAEYIIDSGGKRMRPLLVLLAGQLNGQLT 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H LLA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL +++F M+ Sbjct: 64 DRHHLLAAIIEFLHTATLLHDDVVDKSDMRRGRATANANWGNAPSVLVGDFLYARSFEML 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E + + +++LS +AEGE+ QL KN D+TE Y+ VIK KTA+LF A+ E S Sbjct: 124 VELGNFDVMQSLSQATRVIAEGEVMQLMNVKNPDITEAQYMEVIKGKTAILFKASAETSG 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 LI+G + AL YG+NLG+AFQL+DD LDY G+ +GKNIG+D GKPTLP+I A Sbjct: 184 LISGYDRTSVNALADYGLNLGLAFQLIDDALDYAGDAEALGKNIGDDLAEGKPTLPLIFA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++GT EK ++ I G + L ++R A+ +A ++ AK +L Sbjct: 244 MEKGTDEEKALVRNCIRKGGLV--ELDAVLEVIRHTDAIGYVTQKALTHADAAKQALASF 301 Query: 302 PDSSWKKSLMEVVDFCLQR 320 DS K++LM + D + R Sbjct: 302 ADSDSKRALMALADLAVSR 320 >gi|330504899|ref|YP_004381768.1| polyprenyl synthetase [Pseudomonas mendocina NK-01] gi|328919185|gb|AEB60016.1| polyprenyl synthetase [Pseudomonas mendocina NK-01] Length = 322 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 131/321 (40%), Positives = 197/321 (61%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L + L Y+ Sbjct: 4 QAFYRVVADDFTAVDAIIRQQVVSRVPLVEKIGDYIISAGGKRLRPLLVLLSGRALGYQA 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSDMRRGRSTANAQWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMKILSHATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHAAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AG + R+AL+++G +LGIAFQLVDD+LDY+G+ E+GKN+G+D GKPTLP+I Sbjct: 184 ALAGANEAQREALRTFGDHLGIAFQLVDDLLDYKGDAAELGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + GT+ + + I G +E+L+ + AL T A Y ++A L L Sbjct: 244 MREGTEEQAALVRRAIQKG--GIEDLESIRAAVDAAGALDYTAQLARDYAERAIACLDVL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P ++ +L+E+ F + R + Sbjct: 302 PAGEYRDALIELSRFAVARTH 322 >gi|77361572|ref|YP_341147.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas haloplanktis TAC125] gi|76876483|emb|CAI87705.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas haloplanktis TAC125] Length = 323 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 129/320 (40%), Positives = 194/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L DM VN LI ++ SDV ++ + Y++ SGGKR+RPML + A L Y+ Sbjct: 3 IKAIQALIENDMNDVNQLIHAQMRSDVALVNQLGLYIVNSGGKRVRPMLAILAARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H+ LA +EFIHTATLLHDDVVD+S LRRG A +GN SVLVGDF+ +++F + Sbjct: 63 GKDHITLATIVEFIHTATLLHDDVVDESNLRRGTPTANAEFGNAASVLVGDFIYTRSFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + ++ L+ +AEGE+ QL + D TE Y+ VI SKTA LF AA ++ Sbjct: 123 MVGLGKMQVMQVLADATNIIAEGEVLQLMNCNDPDTTEASYMQVIYSKTAKLFEAATGLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I + AL YGM+LG AFQLVDDVLDY + +++GKNIG+D GKPTLP+I Sbjct: 183 AIITEQNQATLDALNLYGMHLGTAFQLVDDVLDYNADADQLGKNIGDDLAEGKPTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G +++ + I +++L++ +++ AL T +A KA L Sbjct: 243 AMQHGNEQQTQLIRDAIEHSN-GMDHLEEILAALKQTNALEFTMQKAELEADKAIACLDF 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L +S +K++L+ + + R Sbjct: 302 LAESEYKQALVSLARIAVDR 321 >gi|34496302|ref|NP_900517.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC 12472] gi|34102155|gb|AAQ58522.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC 12472] Length = 309 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 130/309 (42%), Positives = 191/309 (61%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+ V+ +I R+ SDV +I V +Y+I +GGKRLRP+LTL + L YRG++ LA I Sbjct: 1 MQTVDGVIRARLHSDVVLIRQVAEYIISAGGKRLRPILTLLSGRALGYRGEHLFELAAMI 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL ++AF M++ T++ LE Sbjct: 61 EFIHTATLLHDDVVDESDLRRGRKTANALFGNAASVLVGDFLYTRAFQMMVTTRNMTILE 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 ++ +AEGE+ QL N DV+E++YL VI+ KTA LF AA V +LIA Sbjct: 121 VMAEATNIIAEGEVLQLLNIGNTDVSEDEYLKVIQYKTAKLFEAAARVGALIADASAEQV 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A+ YGM LG AFQ++DDVLDY G+ + +GK++G+D GKPTLP+I + G+ Sbjct: 181 RAMADYGMYLGTAFQIIDDVLDYSGDADTIGKSLGDDLAEGKPTLPLIYTMRNGSSEASA 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + + + + ++ AL + A ++A SL+ +PDS +++L+ Sbjct: 241 LVRDALENAN--RDRFHDVLNAVQSCGALEYAKNEAVKMAEQAIASLQSIPDSEVRQALI 298 Query: 312 EVVDFCLQR 320 E+ + R Sbjct: 299 ELARLSVDR 307 >gi|160871595|ref|ZP_02061727.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella grylli] gi|159120394|gb|EDP45732.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella grylli] Length = 322 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 130/320 (40%), Positives = 192/320 (60%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L KD+++V+ LI + + +D+ +IP + K+LI SGGKRLRP++ L +A Y+ Sbjct: 3 LAPIVALVKKDLDEVDALINRCLYADIPLIPQLAKHLINSGGKRLRPLIALLSAKAFGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA ++E IH ATLLHDDV+D S LRRGK A +WGN SVLVGDFL S+AF + Sbjct: 63 GKEHRRLAASLELIHGATLLHDDVIDGSVLRRGKKTANSLWGNSASVLVGDFLYSRAFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + + L +L+ TLA+ E+ QL N+DV E L VI+ KT VLFS A E Sbjct: 123 ISQINNSRVLTSLADATNTLAQSEVLQLINCYNVDVDEAYCLKVIQGKTGVLFSIAAEQP 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + A+ YGM+LGIAFQL+DD LDY G+ ++GK++G D GKPTLP+I Sbjct: 183 AMLTERPEAEISAMAHYGMHLGIAFQLIDDSLDYSGDPQQLGKSLGNDLSEGKPTLPIIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q + + K+ + G + L I++ AL T A Y +K+ L Sbjct: 243 ALQHASAEQAQLLKTALTQGDQN--KLMTIIPILQSTSALEYTRTLARHYIEKSLTYLNL 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +PDS ++++L + F ++R Sbjct: 301 IPDSDYRQALAHLTTFAIER 320 >gi|254363100|ref|ZP_04979154.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213] gi|153094987|gb|EDN75550.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213] Length = 315 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 128/314 (40%), Positives = 192/314 (61%), Gaps = 5/314 (1%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 DM+ VN IL ++ S+V +I + Y+I GGKR+RP++ + A L YRG H+ A Sbjct: 1 DMQAVNAEILAQLNSEVLLINQLGHYIIAGGGKRIRPLIAVLAARALGYRGKKHITAAAF 60 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M+ + S L Sbjct: 61 IEFVHTATLLHDDVVDESDMRRGRPTANAHFGNAASVLVGDFIYTRSFQMMTDLDSLRVL 120 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + ++ A + Sbjct: 121 KVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCVAIAADASEEI 180 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR-- 248 ALK+YG LG AFQL+DD+LDY + +GKN+G+DF GKPTLP++ A K Sbjct: 181 ETALKNYGCYLGTAFQLIDDILDYSAQSESLGKNVGDDFVEGKPTLPLLHAMHAADKAGK 240 Query: 249 --EKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + ++ I +G +E + + IM+E+++L +A QKA DSL LP+S + Sbjct: 241 TTQAELIRNAIENGG-ELEQIPQVLAIMQEHQSLDYAMQKAREEAQKAVDSLGVLPESEY 299 Query: 307 KKSLMEVVDFCLQR 320 K++L+ + + R Sbjct: 300 KQALVSLAYLSVDR 313 >gi|94501366|ref|ZP_01307886.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65] gi|94426479|gb|EAT11467.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65] Length = 322 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 132/317 (41%), Positives = 196/317 (61%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + + + + N +IL+++ S+V M+ + ++I SGGKR+RP+L L A LE N Sbjct: 6 IYQVVETEFARTNEIILEQLSSNVPMVEKIGHHIIESGGKRMRPLLVLLAAKALESNEQN 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H LLA IEF+HTATLLHDDVVD S +RRGK A +GN SVLVGDFL S+AF M+++ Sbjct: 66 HPLLASIIEFLHTATLLHDDVVDTSDMRRGKATANAAFGNAPSVLVGDFLYSRAFEMMVQ 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S E + LS C +AEGE+ QL KN +V E+ Y+ VI+ KTA+LF A+ + + Sbjct: 126 LGSMEVMAILSNATCVIAEGEVMQLMNVKNPNVGEDKYMDVIQGKTAMLFEASSHSGAKL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A +AL+ +G +LG+AFQLVDDVLDY G +E+GKN+G+D GKPTLP+I A Q Sbjct: 186 ANASPEQAEALRLFGHHLGMAFQLVDDVLDYIGNADELGKNVGDDLAEGKPTLPLIFAMQ 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 ++ + + + I G E+L K I++ A+ T+ +A + +A +++ L D Sbjct: 246 NASQEQADVIRQAIRKG--GTEDLPKIIEIVQSCGAIDYTQQKAQEHVNQACEAIAILAD 303 Query: 304 SSWKKSLMEVVDFCLQR 320 + K++L + D + R Sbjct: 304 TPAKQALQTLADMAINR 320 >gi|88704338|ref|ZP_01102052.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71] gi|88701389|gb|EAQ98494.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71] Length = 320 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 122/322 (37%), Positives = 196/322 (60%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + + K+++ VN +I++++ SDVEM+ +V +Y++ +GGKRLRP+L L ++ L Sbjct: 1 MQEVRAVVSKELDAVNAVIIEQLRSDVEMVENVGQYIVDAGGKRLRPVLVLLSSAALGSI 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + + A +EFIHTATLLHDDVVD S LRRG+ A +GN +SVLVGDFL ++AF + Sbjct: 61 SELQIRFAAVVEFIHTATLLHDDVVDVSELRRGRPTANSAFGNASSVLVGDFLYTRAFQL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + L+ ++ T+A GE+ QL + + +E+ Y VI KTA LF+A + + Sbjct: 121 MVTLGNHDVLKMMADTTNTIAAGEVLQLIRAGDSSTSEDQYYDVIDRKTAALFAAGCQGA 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+AG + + L YG N+GIAFQ+VDD+LDY+G+ GKN+G+D GKPTLP+I Sbjct: 181 ALLAGADSGNVRDLNIYGRNVGIAFQIVDDLLDYQGDPEVTGKNVGDDLAEGKPTLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G+ + + IN E L +++ +L T A S KA +L+ Sbjct: 241 VMREGSNAQATLVREAIN--AKDRERLPDIIQAVKDCGSLEYTREAAVSCRDKALGALKG 298 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 P+S KK+++ + L+R + Sbjct: 299 FPESPAKKAMINLAALSLERSH 320 >gi|296535664|ref|ZP_06897840.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957] gi|296264015|gb|EFH10464.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957] Length = 347 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 150/320 (46%), Positives = 204/320 (63%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L +D+E N I+ R+ S V++IP + +LI +GGKRLRP+L LA A + YR Sbjct: 26 LTALVSLVQEDLEACNREIIARMQSPVQLIPQLAAHLIAAGGKRLRPLLVLAAARLCGYR 85 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV LA +EFIHTATLLHDDVVD+S LRRG+ +A ++GN+ SVLVGDFL ++AF + Sbjct: 86 GQRHVGLAACVEFIHTATLLHDDVVDESDLRRGQASANAIFGNKASVLVGDFLFARAFQL 145 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S E L+ L + T+AEGE+ QL + + TE YL VI+ KTA LF+AA V Sbjct: 146 MTADGSLEVLDILCGASATIAEGEVLQLVIQNDTSSTEAQYLEVIEGKTAALFAAATRVG 205 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL++YG N GIAFQLVDD LDY E +GK +G+DFR GK TLPV+L Sbjct: 206 AVVAERPKAEADALEAYGRNFGIAFQLVDDALDYSAEQERLGKTVGDDFREGKITLPVLL 265 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF RG + EK FW+ + + + +L A +M +RA+ DT RA YG A L Sbjct: 266 AFARGDETEKTFWRRVLEEKRQEEGDLAHALSLMHRHRAIEDTIARARHYGDLALQGLAP 325 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 D K++L VV+FC+ R Sbjct: 326 FADGPEKQALAGVVEFCIAR 345 >gi|224823689|ref|ZP_03696798.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] gi|224604144|gb|EEG10318.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] Length = 360 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 135/319 (42%), Positives = 194/319 (60%), Gaps = 2/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + L DM+ V+ +I R+ SDV +I V +Y+I +GGKRLRP+LTL L+YRG Sbjct: 42 PLFRSLLADDMQTVDRVIRARLHSDVVLIRQVAEYIISAGGKRLRPVLTLLAGKALDYRG 101 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 ++ LA IEFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL ++AF M+ Sbjct: 102 EHLHELAAMIEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDFLYTRAFQMM 161 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + T++ LE ++ +AEGE+ QL N DVTE YL VI+ KTA LF AA V + Sbjct: 162 VTTRNMAILEVMAEATNIIAEGEVLQLLNIGNTDVTEAQYLQVIQYKTAKLFEAASRVGA 221 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 LIA +AL YGM+LG AFQ++DDVLDY G+ +GK++G+D GKPTLP+I Sbjct: 222 LIAAASPEQEKALADYGMHLGTAFQIIDDVLDYSGDAETIGKSLGDDLAEGKPTLPLIHT 281 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G+ + I + + + + ++ AL + A ++A ++ L Sbjct: 282 MRHGSPEAATTVRDAIENAR--GDRFHEVLAAVQSCGALDYAKSEAVRAAEQAVAAIAGL 339 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS K++L+E+ ++R Sbjct: 340 PDSPSKQALVELARLSVER 358 >gi|291465068|gb|ADE06004.1| polyprenyl synthase [Rhodobacter sphaeroides 2.4.1] Length = 333 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 140/315 (44%), Positives = 206/315 (65%), Gaps = 1/315 (0%) Query: 8 TLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y G H+ Sbjct: 18 LAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIH 77 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +++ET S Sbjct: 78 LAATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGS 137 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA EV ++AGV Sbjct: 138 LRVMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGV 197 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI A + Sbjct: 198 PEAQVEALHAYGDALGIAFQIVDDLLDYGGVDAQIGKNTGDDFRERKLTLPVIKAVAQAD 257 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW+ I G +L++A IM + A+ A + A+++L LP+ Sbjct: 258 AEERAFWQRVIEKGDQREGDLEQAHAIMSRHGAMEAARQDALRWVTVAREALGQLPEHPL 317 Query: 307 KKSLMEVVDFCLQRL 321 +K L ++ DF ++R+ Sbjct: 318 RKMLHDLADFVVERI 332 >gi|146308698|ref|YP_001189163.1| polyprenyl synthetase [Pseudomonas mendocina ymp] gi|145576899|gb|ABP86431.1| Polyprenyl synthetase [Pseudomonas mendocina ymp] Length = 322 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 130/321 (40%), Positives = 197/321 (61%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + D V+ +I +++ S V ++ + Y+I +GGKRLRP+L L + L Y+ Sbjct: 4 QAFYRVVADDFTAVDGIIRQQVVSRVPLVEKIGDYIISAGGKRLRPLLVLLSGRALGYQA 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ LLA IEF+HTATLLHDDVVD S +RRG+ A WGN SVLVGDFL S++F M+ Sbjct: 64 DDLRLLAATIEFLHTATLLHDDVVDMSDMRRGRSTANAQWGNAPSVLVGDFLYSRSFEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S ++ LS +AEGE+ QLS ++ TEE Y+ VI+ KTA+LF A+ ++ Sbjct: 124 VELGSMPVMKILSHATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +AG + R+AL+++G +LGIAFQLVDD+LDY+G+ E+GKN+G+D GKPTLP+I Sbjct: 184 ALAGANEAQREALRTFGDHLGIAFQLVDDLLDYKGDAAELGKNVGDDLAEGKPTLPLIYT 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G++ + + I G +E+L+ + AL T A Y ++A L L Sbjct: 244 MREGSEEQAALVRRAIQKG--GIEDLESIRAAVDAAGALDYTARLARDYAERAIACLDVL 301 Query: 302 PDSSWKKSLMEVVDFCLQRLN 322 P ++ +L+E+ F + R + Sbjct: 302 PAGEYRDALIELSRFAVARTH 322 >gi|254427749|ref|ZP_05041456.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881] gi|196193918|gb|EDX88877.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881] Length = 323 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 194/321 (60%), Gaps = 3/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K + + D E VN I + S+V +I +V Y+I SGGKRLRP++ + A Y+G Sbjct: 4 KAIYAVVDDDFEAVNQFISHHLDSNVPLIREVGDYIIQSGGKRLRPLIAILCARAAGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D HV +A IEF+HTATLLHDDVVD+S LRRG+ VWGN SVLVGDFL+S+A ++ Sbjct: 64 DRHVDVAAIIEFLHTATLLHDDVVDESNLRRGRPTVNAVWGNAASVLVGDFLISRALQLM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + + L+ S T++EGE+ QL ++ + +EE+Y+ VI KTA +F +A E + Sbjct: 124 VALRHPRLLDIFSQSTNTISEGEVLQLINVRDPNTSEENYMRVIHHKTAKMFESAAETGA 183 Query: 182 LI-AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ A + A +YG +LGIAFQL+DDVLDY+G+ +E+GKN+G+D GKPTLP+I Sbjct: 184 VLGADEVSDHVDAFATYGRHLGIAFQLIDDVLDYQGDASELGKNVGDDLAEGKPTLPLIY 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 G+ + K I G + E+L++ +R + L T +A + A +++ Sbjct: 244 TIANGSPEQATLIKDAIRSGGL--EHLEQIVETVRASGGLQYTVDKAAEQTRIALEAIAQ 301 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 +P S +K +L + + L+R Sbjct: 302 VPASPYKDALFRLAEESLKRT 322 >gi|255066032|ref|ZP_05317887.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256] gi|255049577|gb|EET45041.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256] Length = 324 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 128/322 (39%), Positives = 199/322 (61%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ +VN +I + + SDV +I + Y+I +GGKRLRP++T+ A + Y Sbjct: 5 LPYFQRHLPEDLSRVNEVINQAVQSDVALISQIGTYIISAGGKRLRPIMTILAAKSVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 GDKLYALAAMVEFIHTSTLLHDDVVDESDLRRGRETANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++++ S LE ++ +AEGE+ QL N D+TE Y+ VI+ KTA LF AA +V Sbjct: 125 MVDSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEAQYVQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I Sbjct: 185 AILGNAAPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G+K+ + + + + S + +K + + AL + A ++A SL Sbjct: 245 LMRNGSKQVADDVRHALENADRS--SFQKIHDYVVHSDALTYSISEARKAVEQAVASLAV 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K++++++ + L R++ Sbjct: 303 LPDSEVKQAMIQLAEESLARVS 324 >gi|319639120|ref|ZP_07993876.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102] gi|317399597|gb|EFV80262.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102] Length = 324 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 127/322 (39%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + + Sbjct: 5 LPYFQRHLPDDLAKVNAVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKAVGHD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYVQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G+++ N + + + S +K + + AL + A KA SL Sbjct: 245 LMRNGSEQAANDVRHALENADRS--YFEKIHDYVVNSDALPYSISEAKKAVDKAIASLDV 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K++++++ L R++ Sbjct: 303 LPDSEVKEAMIQLAKESLARVS 324 >gi|254503516|ref|ZP_05115667.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] gi|222439587|gb|EEE46266.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] Length = 318 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 161/317 (50%), Positives = 226/317 (71%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL M VN LIL + S+V++IP++ K+LI SGGKRLRPMLTLA A M Y+G HV Sbjct: 2 DLVAPGMADVNELILSKAGSNVDLIPEIAKHLISSGGKRLRPMLTLAFADMFGYQGSGHV 61 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +LA ++EF+HTATLLHDDVVD+S +RRGK+AAR +WGNQ SVLVGD+LL QAF M+++T Sbjct: 62 ILAASVEFMHTATLLHDDVVDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKMMVDTG 121 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S EAL LS + +AEGE+ QL SKN++ TE +YL VI++KTA LF+AA EV IAG Sbjct: 122 SLEALRILSEASAIIAEGEVLQLGASKNIETTEAEYLRVIEAKTAALFAAAAEVGPEIAG 181 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + +R+A ++YG+ LG AFQ+VDD LDY G ++GK++G+DFR GK TLPV+LA RG Sbjct: 182 QNDVMRKAARTYGLELGYAFQMVDDALDYGGSSADLGKDVGDDFREGKITLPVVLAVARG 241 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T +++ FWK + ++ ++L +A ++++ A+ +T RA +YG A +L LP + Sbjct: 242 TDQDRAFWKRCMEGDNVTDDDLAEAIELLKKFDAIAETVQRARTYGDNALKALDQLPACA 301 Query: 306 WKKSLMEVVDFCLQRLN 322 +L + V FC+ R++ Sbjct: 302 HTDALADAVAFCIARVS 318 >gi|241760794|ref|ZP_04758885.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114] gi|241318691|gb|EER55243.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114] Length = 324 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 127/322 (39%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + + Sbjct: 5 LPYFQRHLPDDLAKVNAVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKAVGHD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYVQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I Sbjct: 185 AILGKASTEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G+++ N + + + S +K + + AL + A KA SL Sbjct: 245 LMRNGSEQAANDVRHALENADRS--YFEKIHDYVVNSDALPYSISEAKKAVDKAIASLDV 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K++++++ L R++ Sbjct: 303 LPDSEVKEAMIQLAKESLARVS 324 >gi|33591927|ref|NP_879571.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I] gi|33571571|emb|CAE41057.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I] gi|332381344|gb|AEE66191.1| octaprenyl-diphosphate synthase [Bordetella pertussis CS] Length = 321 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 195/320 (60%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L DM+ V+ +I R+ SDV +I + Y+I +GGKR+RP + L A L Y+ Sbjct: 3 LPELIAPIADDMKAVDTVIRDRLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LLA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M Sbjct: 63 GTHHQLLAAVVEFIHTATLLHDDVVDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S ++ LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V Sbjct: 123 MVEADSMRIMQILSQATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG A +YG ++G AFQLVDDVLDY G+ + +GKN+G+D R GKPTLP+I Sbjct: 183 AVLAGASPEQETAAAAYGRHVGTAFQLVDDVLDYSGDAHALGKNVGDDLREGKPTLPLIR 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + GT ++ + I G+ + +A ++ AL A + + A+ +L Sbjct: 243 VMETGTPEQRELIREAIKTGQADFAAVAQA---IQATDALAHARQAAENEAELARQALSA 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S ++KSL+E F + R Sbjct: 300 FPVSLYQKSLLEFCAFAVNR 319 >gi|261378364|ref|ZP_05982937.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685] gi|269145472|gb|EEZ71890.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685] Length = 324 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 127/322 (39%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQKHLSEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGRSVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 NEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE+Y+ VI+ KTA LF AA +V Sbjct: 125 MVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEEYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I Sbjct: 185 SILGNAPPECEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N + + + S K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRLALENADRS--YFAKIHEYVVRSDALAYSIGEARKAVDCAIAALDT 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K++++ + L R++ Sbjct: 303 LPDSEAKEAMIRLAQESLVRVS 324 >gi|217970068|ref|YP_002355302.1| trans-hexaprenyltranstransferase [Thauera sp. MZ1T] gi|217507395|gb|ACK54406.1| Trans-hexaprenyltranstransferase [Thauera sp. MZ1T] Length = 322 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 134/322 (41%), Positives = 196/322 (60%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L DM+ V+ +I R+ SDV +I + +Y++ SGGKRLRP L L A L+YR Sbjct: 3 VQQLFAPIAADMQAVDTVIRNRLHSDVALIRRIAEYIVGSGGKRLRPALVLYAAGALDYR 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA +EFIHTA+LLHDDVVD+S LRRGK A +GN ++VLVGDFL S+AF M Sbjct: 63 GVHHHELAAVVEFIHTASLLHDDVVDESDLRRGKRTANAAFGNASAVLVGDFLYSRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + L+ +AEGE+ QL N DV EDYL VI+ KTA LF AA + Sbjct: 123 MVGVDEMRVMRVLADATNIIAEGEVLQLLNCHNADVVIEDYLRVIRYKTAKLFEAAARLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AG +++ Q L ++GM+LG AFQL+DDVLDY + + GK++G+D GKPTLP+I Sbjct: 183 GIVAGADDALEQRLAAFGMHLGTAFQLIDDVLDYSADEADTGKHLGDDLAEGKPTLPLIH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q GT + + I G + ++ AL +T A + + A D++ Sbjct: 243 VMQHGTAEQGALVRHAIEGG--GRGDFAAVLAAIQSTGALEETRRYAEAEAKLAIDAISV 300 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +K++L+++ DF ++R + Sbjct: 301 LPPSIFKEALLQLSDFAVRRKH 322 >gi|297537721|ref|YP_003673490.1| trans-hexaprenyltranstransferase [Methylotenera sp. 301] gi|297257068|gb|ADI28913.1| Trans-hexaprenyltranstransferase [Methylotenera sp. 301] Length = 332 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 126/320 (39%), Positives = 185/320 (57%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ D+ VN +I + S+V ++ V Y++ SGGKRLRP+L L + + Sbjct: 13 LNTIQSCIAADILAVNTVITHSLHSEVTLVNQVAHYIVNSGGKRLRPILVLLSGGLFGEV 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 H LA +EFIHTATLLHDDVVD+S+ RRG+ A ++GN SVLVGDF+ S+AF M Sbjct: 73 KPEHHQLAAVVEFIHTATLLHDDVVDESSKRRGQNTANAIFGNAASVLVGDFVYSRAFQM 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ ++ +E LS +AEGE+ QL N DVT+ YL VI KTA LF AA + Sbjct: 133 MVAVQNMRVMEVLSNATNVIAEGEVLQLLNIHNADVTDGAYLQVIHYKTAKLFEAATRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I+ S +AL YGM++G AFQL+DDVLD G +E+GKN+G+D GKPTLP++ Sbjct: 193 AIISNASPSDEEALSQYGMHIGTAFQLIDDVLDLSGNASEIGKNLGDDLSEGKPTLPLLY 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT E K I G + E+L + AL A + A ++ Sbjct: 253 AMRNGTADEAETIKRAIEHGGL--EDLVTVLSAVERTGALDHVRKVAAKESELACAAIAH 310 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 DS +K++++ + +F + R Sbjct: 311 FADSPYKQAMLTLAEFAVAR 330 >gi|39996419|ref|NP_952370.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA] gi|39983299|gb|AAR34693.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA] gi|298505429|gb|ADI84152.1| octaprenyl diphosphate synthase [Geobacter sulfurreducens KN400] Length = 322 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 130/320 (40%), Positives = 190/320 (59%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L D++ V K + SDV +I V +Y++ SGGKR+RPML L +A + Y+ Sbjct: 1 MHAALSLVGDDLKNVELQFRKDLESDVYLIRKVGEYVLASGGKRIRPMLLLLSAKLCGYQ 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA IEFIHTATLLHDDVVD++ LRRG +A VWGN+ SVLVGDFL S++F + Sbjct: 61 GDRHVPLASVIEFIHTATLLHDDVVDNATLRRGNASANEVWGNEASVLVGDFLFSKSFSL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E L+ +S +AEGE+ QL + +L++T+E Y+ V+KSKTAVL SAA E Sbjct: 121 MVEAGDLRILKVISGATTIIAEGEVLQLLCTSDLEMTQERYIEVVKSKTAVLLSAACEAG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ ++AL+ +GM+LGIAFQL+DD LDY + GK IG D GK TLP+I Sbjct: 181 AILGTSSAEQQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + + E+ + + + + + F ++ + + T A Y + K L Sbjct: 241 TLMKCSDEERETIAAVVEKEILEPGDFESVFTLVHKYGGIEYTVSVANEYIARCKAHLGA 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 DS K +L+E+ D+ + R Sbjct: 301 FVDSQEKAALIELADYVVNR 320 >gi|209964973|ref|YP_002297888.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum SW] gi|209958439|gb|ACI99075.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum SW] Length = 340 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 155/320 (48%), Positives = 213/320 (66%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L D+ VN IL R+ S VE+IP + Y++ GGKRLRP+LTLA A + Y+ Sbjct: 19 LEALIALVADDLNAVNEQILSRMHSSVELIPQLGGYIVAGGGKRLRPVLTLAAAQLCGYQ 78 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G LA +EF+HTATLLHDDVVD+S LRRG+ +A V+GN+ SVLVGDFL ++AF + Sbjct: 79 GTRQTALAACVEFLHTATLLHDDVVDESDLRRGQASANAVFGNKASVLVGDFLFARAFQI 138 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S + L L + +AEGE+ QL+ + + D TEE YL VIK+KTA LF+AA E+ Sbjct: 139 MVEDGSLDVLRILCTASAVIAEGEVLQLTTTNDTDTTEEAYLEVIKAKTAELFAAACELG 198 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + AL+SYGMNLGIAFQLVDDVLDY +GK IG+DFR GK LPV+L Sbjct: 199 GIVADRPAVEQAALRSYGMNLGIAFQLVDDVLDYSAVQARLGKTIGDDFREGKINLPVVL 258 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 AF+RG + E+ FW+ T+ D +L+ A +M + AL D+ RA YG A+D+L Sbjct: 259 AFRRGDEEERQFWRRTMEDLDQRDGDLEHAIALMTRHNALHDSVERARHYGAVARDALEM 318 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P+S K +L++V+DF + R Sbjct: 319 FPNSRIKHALLDVIDFVVSR 338 >gi|251793088|ref|YP_003007814.1| octaprenyl-diphosphate synthase [Aggregatibacter aphrophilus NJ8700] gi|247534481|gb|ACS97727.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Aggregatibacter aphrophilus NJ8700] Length = 323 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 198/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M ++ L+ DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + Sbjct: 3 MNAIQALSHADMQKVNESILAQLNSDVVLINQLGFYIVQGGGKRIRPLIAVLAARALGFE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 63 GPQAITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + +S + L ++ LAEGE++QL + +EE+Y+ VI SKTA LF A + + Sbjct: 123 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMRVIYSKTARLFEVAAQAA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IAG + QAL+SYG LG AFQLVDDVLDY V +GKN+G+D GKPTLP++ Sbjct: 183 AIIAGSNEAQEQALQSYGRYLGTAFQLVDDVLDYSANVKALGKNVGDDLAEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G +++ + I G E + + IM E+++L RA QKA D+++ Sbjct: 243 AMHHGNEQQAALIREAIEQGG-KREAIDEVLAIMAEHKSLDYAMDRAKQEAQKAVDAIQI 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 302 LPESEYKQALISLAYLSVDR 321 >gi|322513608|ref|ZP_08066706.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976] gi|322120568|gb|EFX92468.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976] Length = 331 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 136/324 (41%), Positives = 201/324 (62%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L YR Sbjct: 7 LEKIQALAKQDMQAVDAEILAQLNSEVVLINQLGHYIIAGGGKRIRPLIAVLAANALGYR 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV A IEF+HTATLLHDDVVD+S +RRG+ A +GN SVLVGDF+ +++F M Sbjct: 67 GDKHVTCAAFIEFVHTATLLHDDVVDESDMRRGRATANATFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S E L+ +S LAEGE++QL + + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTSVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AGV+ SV ALK YG LG AFQL+DD+LDY + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSAKAESFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AF----QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 A +G + + + +S I +G E + IM E+++L RA QKA D Sbjct: 247 AMHAAQAKGNQAQVDMIRSAIENGG-EREQIPAVLEIMAEHQSLDYAMARAKQEAQKAVD 305 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LP+S +K++L+ + R Sbjct: 306 ALAVLPESEYKQALISLAYLSADR 329 >gi|253998223|ref|YP_003050286.1| trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4] gi|253984902|gb|ACT49759.1| Trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4] Length = 322 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 130/321 (40%), Positives = 192/321 (59%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ +DM+ V+ +I K + SDV +I V +Y+I GGKRLRP L L +A Sbjct: 3 LAFIKSCIAQDMQAVDAVIRKSLHSDVVLINQVAEYIINGGGKRLRPALVLLSAGAFGEV 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 H LA +EFIHTATLLHDDVVD+SA+RRG+ A ++GN SVLVGDF+ S+AF M Sbjct: 63 NARHHELAAVVEFIHTATLLHDDVVDESAMRRGRATANTLFGNAASVLVGDFIYSRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ +S +E L+ +AEGE+ QL + D+T+E YL VI KTA LF AA + Sbjct: 123 MVGVESMRVMEVLAEATNIIAEGEVLQLLNVHDADITDEAYLKVIHYKTAKLFEAATRLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I QA+ YGM LG AFQL+DDVLD+ G+ E+GKN+G+D GKPTLP+++ Sbjct: 183 AIICAASEQDEQAMAEYGMRLGTAFQLIDDVLDFSGDSQEIGKNLGDDLAEGKPTLPLLI 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT + + I +G + + L + E AL A + D+++ Sbjct: 243 AMRLGTTAQAQTIRKAIEEGGL--DELPAVMQAVHETGALDQVRAIARQEAKAGCDAIQH 300 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LPDS +++L+++ +F + R Sbjct: 301 LPDSPSRQALLKLAEFAVDRT 321 >gi|290473433|ref|YP_003466299.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004] gi|289172732|emb|CBJ79503.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004] Length = 323 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 127/322 (39%), Positives = 187/322 (58%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT DM VN IL ++ SDV +I + Y+I GGKR+RPM+ + L Sbjct: 3 LESIIKLTADDMAAVNETILNQLNSDVALINQLGYYIISGGGKRIRPMIAVLAGKALHCE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + H+ +A IEFIHTATLLHDDVVD+S +RRGK A ++GN SVLVGDF+ +++F M Sbjct: 63 KEKHIKVAALIEFIHTATLLHDDVVDESDMRRGKATANAMYGNAASVLVGDFIYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + S L+ +S +AEGE+ QL + D +E+DY+ VI SKTA LF A + Sbjct: 123 MTDLDSMRVLKLMSDATNVIAEGEVMQLMNCNDPDTSEDDYMRVIYSKTARLFEVAAHSA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++G AL+ YG LG AFQL+DD+LDY + + +GKN G+D GKPTLP++ Sbjct: 183 AILSGATPEQEAALRDYGRYLGTAFQLIDDLLDYDSDDSTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G + +S I G L M++ +L T RA KA +L+ Sbjct: 243 AMHHGVPEQSALIRSAIEQGN-GRHLLDTVLATMKQCGSLKYTRQRAEEEADKAISALQV 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L +S +K +L+ + +QRL+ Sbjct: 302 LDESPYKAALVGLAHVAVQRLS 323 >gi|332140074|ref|YP_004425812.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|332143128|ref|YP_004428866.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327550096|gb|AEA96814.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327553150|gb|AEA99868.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] Length = 324 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 129/323 (39%), Positives = 191/323 (59%), Gaps = 2/323 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L+ DM+ VN LI +++ S+V +I + Y++ SGGKRLRP+LT+ +A + Sbjct: 3 IDQIRALSNDDMQAVNQLIQQQVDSEVALINQLGFYIVNSGGKRLRPLLTVLSARAMGID 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + H LA +EFIHTATLLHDDVVD+S +RRG+ A ++GNQ SVLVGDFL +++F M Sbjct: 63 NNEHHTLAAIVEFIHTATLLHDDVVDESTMRRGRETANAIFGNQASVLVGDFLYTRSFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ K +E LS +AEGE+ QL + TE Y VI KTA LF AA +++ Sbjct: 123 MVSLKRMRVMEILSEATNQIAEGEVLQLMNCNDAGTTEARYFDVIYGKTARLFEAATQLA 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + +A++ YG +LG AFQL DD+LDY + EMGKN G+D GKPTLP++ Sbjct: 183 AVLTEQNEHIERAMQEYGKHLGTAFQLADDILDYMADSEEMGKNAGDDLAEGKPTLPLLY 242 Query: 241 AFQRGT-KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A T +K + I + +L + IM E AL T A Q A DSL Sbjct: 243 AMWHATNDSDKALIQEAIEQSN-GLPHLTRIQGIMEETGALDYTRQCAQKEVQMAIDSLS 301 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 + DS +K++L+ + ++R + Sbjct: 302 AIEDSKYKEALIALAHISIERTS 324 >gi|261379260|ref|ZP_05983833.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703] gi|284797691|gb|EFC53038.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703] Length = 324 Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 127/322 (39%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + + Sbjct: 5 LPYFQRHLPDDLAKVNAVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKAVGHD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYVQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G+++ N + + + S +K + + AL + A KA SL Sbjct: 245 LMRNGSEQAANDVRYALENADRS--YFEKIHDYVVNSDALPYSISEAKKAVDKAIASLDV 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K++++++ L R++ Sbjct: 303 LPDSEVKEAMIQLAKESLARVS 324 >gi|77919579|ref|YP_357394.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380] gi|77545662|gb|ABA89224.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380] Length = 322 Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 120/322 (37%), Positives = 194/322 (60%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M++ + L +D++ + + + SDV +I + Y++ SGGKR+RP+L L A + Y Sbjct: 1 MQLAQTLLKEDLQHIESCFRQYLTSDVPLIRQMSDYILASGGKRIRPVLLLLCARLSGYN 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++ LA IEFIHTATLLHDDVVD + LRRG+VAA + WGN +VLVGD+L ++ F M Sbjct: 61 GEHRYPLASVIEFIHTATLLHDDVVDGATLRRGQVAANVTWGNDIAVLVGDYLFARCFEM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ + ++ L+ +A+GE+ QL S +L + EE YL V++SKTA LFSA + Sbjct: 121 MVDFCDRRIMQVLANTTSLMAQGEVVQLINSGDLSLDEERYLSVVRSKTAALFSATCRCA 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + + L +GM+LG+AFQLVDD LDY + NE GK +G D GK TLP+I Sbjct: 181 AILGQLSAEKEEDLAGFGMHLGVAFQLVDDALDYVADQNESGKLLGRDLAEGKMTLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + + E+ + G++ E+L ++ + T+ +A SY ++A L+ Sbjct: 241 SLRHCQGEERQQVSGILAKGQLHAEDLAFVQNLINRYDGIGYTQRQADSYVKQACLRLQG 300 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 PDS +++L+E+ + + R + Sbjct: 301 FPDSPARQALVELAESAVHRRS 322 >gi|207721484|ref|YP_002251924.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum MolK2] gi|206586644|emb|CAQ17230.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum MolK2] Length = 352 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 133/313 (42%), Positives = 195/313 (62%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG++H L Sbjct: 40 VAEDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGNHHYEL 99 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 100 AAVVEFIHTATLLHDDVVDESELRRGRQTANAVFGNAASVLVGDFLYSRAFQMMVQADSM 159 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G Sbjct: 160 RVMQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGAD 219 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ Sbjct: 220 AATEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIHLLSHGTE 279 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G E+ F ++ + AL T A A +++ LP S ++ Sbjct: 280 EQRALARQAIEQG--GTEHFDAIFDAIQASGALEYTRKAAEREASAAAEAIIALPPSQFR 337 Query: 308 KSLMEVVDFCLQR 320 ++L+E+ F LQR Sbjct: 338 QTLIELCAFSLQR 350 >gi|78223658|ref|YP_385405.1| polyprenyl synthetase [Geobacter metallireducens GS-15] gi|78194913|gb|ABB32680.1| Polyprenyl synthetase [Geobacter metallireducens GS-15] Length = 322 Score = 298 bits (764), Expect = 7e-79, Method: Composition-based stats. Identities = 128/320 (40%), Positives = 188/320 (58%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L D++ V K + SDV +I V +Y++ SGGKR+RP L L A + Y Sbjct: 1 MHSALALVGDDLKNVEAQFKKDLESDVYLIRKVGEYVLASGGKRIRPTLLLLAAKLCGYT 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV LA IEFIHTATLLHDDVVD++ LRRG +A VWGN+ SVLVGDFL S++F + Sbjct: 61 GDRHVPLASVIEFIHTATLLHDDVVDNATLRRGNASANEVWGNEASVLVGDFLFSKSFSL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ L+ +S +AEGE+ QL + +LD+T E Y+ V+KSKTAVL SAA E Sbjct: 121 MVQAGDLRVLKVISDATTIIAEGEVLQLLCTSDLDMTLERYIEVVKSKTAVLLSAACEAG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ AL+ +GM+LGIAFQL+DD LDY + GK IG D GK TLP+I Sbjct: 181 AILGKATPEQELALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++ T E+ + + + + + F ++ + + T A Y + K+ L+ Sbjct: 241 TLRKCTDEERETIAAVVEKEVMEPGDFEAVFALVHKYGGIQYTTEVAGEYIARCKEHLQA 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S+ K++ +++ D+ + R Sbjct: 301 FPASTEKQAALDLADYVVSR 320 >gi|297183903|gb|ADI20025.1| geranylgeranyl pyrophosphate synthase [uncultured gamma proteobacterium EB000_65A11] Length = 321 Score = 298 bits (764), Expect = 7e-79, Method: Composition-based stats. Identities = 126/313 (40%), Positives = 186/313 (59%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 D V+ LI + + V ++ ++ YLI +GGKRLRP+L L A Y+ H+ L Sbjct: 9 VKTDFSAVDVLIKSSLVTRVPLVEEISTYLIEAGGKRLRPLLVLLAARACNYQQHQHINL 68 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A IEF+HTA LLHDDVVD+S LRRG+ WGN SVLVGDFL S+AF M++E Sbjct: 69 ATIIEFLHTAMLLHDDVVDESDLRRGRKTVNAAWGNPASVLVGDFLHSRAFEMMVEIGDL 128 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS T+AEGE++QL +N D TE+ Y+ VI KTA+LF AA +++AG Sbjct: 129 RVMEILSHATNTIAEGEVQQLGNIRNPDATEQSYIEVINRKTAMLFEAASHSGAVLAGAS 188 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +L+ YG +LG+AFQL+DD+LDY G ++GKN+G+DF GK TLP+I+A + G+ Sbjct: 189 PEQELSLQQYGCHLGVAFQLIDDILDYEGSTEQLGKNVGDDFAEGKVTLPLIVAMRNGSP 248 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + + I G+++ ++ ++ L TE A + KA L LP S +K Sbjct: 249 EQASTVRQAILTGEVA--DIDNLLKTVKATGGLQYTEALAVAEIDKATACLEKLPSSVYK 306 Query: 308 KSLMEVVDFCLQR 320 ++ ++ + + R Sbjct: 307 DAMHDLARYSINR 319 >gi|325134983|gb|EGC57614.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M13399] gi|325202853|gb|ADY98307.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240149] gi|325208846|gb|ADZ04298.1| octaprenyl-diphosphate synthase [Neisseria meningitidis NZ-05/33] Length = 324 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 126/322 (39%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + S +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENADRS--YFEKIHDYVVRSDALAYSIGEARKAVDCAVTALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K +++++ L R++ Sbjct: 303 LPDSEVKDAMIQLAKESLVRVS 324 >gi|126463166|ref|YP_001044280.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC 17029] gi|332559215|ref|ZP_08413537.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N] gi|126104830|gb|ABN77508.1| Trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC 17029] gi|332276927|gb|EGJ22242.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N] Length = 333 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 139/315 (44%), Positives = 206/315 (65%), Gaps = 1/315 (0%) Query: 8 TLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y G H+ Sbjct: 18 LAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIH 77 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +++ET S Sbjct: 78 LAATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGS 137 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA EV ++AGV Sbjct: 138 LRVMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGV 197 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI A + Sbjct: 198 PEAQVEALHAYGDALGIAFQIVDDLLDYGGVDAQIGKNTGDDFRERKLTLPVIKAVAQAD 257 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW+ I G +L++A IM + A+ A + A+++L LP+ Sbjct: 258 AEERAFWQRVIEKGDQREGDLEQAHAIMSRHGAMEAARQDALRWVAVAREALGQLPEHPL 317 Query: 307 KKSLMEVVDFCLQRL 321 ++ L ++ DF ++R+ Sbjct: 318 REMLHDLADFVVERI 332 >gi|95929474|ref|ZP_01312217.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM 684] gi|95134590|gb|EAT16246.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM 684] Length = 322 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 127/320 (39%), Positives = 194/320 (60%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + + ++M V + + S+V +I V +Y++ SGGKR+RPML L A + Y+ Sbjct: 1 MERVLQMLEEEMALVEQQFRQDLDSEVTLIRKVGEYVLASGGKRMRPMLVLLCARLAAYQ 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G++H+ +A +EFIHTATLLHDDVVD + LRRG +A VWGN+ SVLVGDFL S++F + Sbjct: 61 GESHIGVASVVEFIHTATLLHDDVVDSADLRRGAASANNVWGNEASVLVGDFLFSKSFSI 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ T S L+ALS +AEGE+ QL + +LD++EE Y+ V++ KTAVL +AA Sbjct: 121 MVRTGSLPILQALSDATTNMAEGEVLQLISTCDLDLSEERYMQVVRDKTAVLIAAACRCG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ GV QAL+ +GM LGIAFQ +DD LDY + E GK G D GK TLP+I Sbjct: 181 GILGGVSAEQEQALQEFGMELGIAFQFMDDALDYVADQAEFGKACGHDLEEGKMTLPLIE 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + ++ E++ + + ++S E+L+K ++ + + T RA + AK L Sbjct: 241 TLRHCSRDERDRVEQIVEKDQLSDEDLEKVIALIHQYDGIDYTRKRAKQLVESAKQRLAA 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 D K++L + D+ + R Sbjct: 301 FEDGEAKQALEILADYVVSR 320 >gi|315634742|ref|ZP_07890026.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393] gi|315476690|gb|EFU67438.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393] Length = 329 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 128/320 (40%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M ++ L+ DM+KVN IL ++ SDV +I + Y++ GGKR+RP++T+ A L + Sbjct: 9 MNAIQALSQADMQKVNESILAQLNSDVVLINQLGFYIVQGGGKRIRPLITVLAARALGFE 68 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 69 GQKAITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + +S + L ++ LAEGE++QL + +EE+Y+ VI SKTA LF A + + Sbjct: 129 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMRVIYSKTARLFEVAAQAA 188 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IA + +AL++YG LG AFQLVDDVLDY +GKN+G+D GKPTLP++ Sbjct: 189 AIIADADDEQEKALQNYGRYLGTAFQLVDDVLDYSANAKALGKNVGDDLAEGKPTLPLLH 248 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G +++ + I G E + + IM E+++L RA QKA D+++ Sbjct: 249 AMHHGNEQQAALIREAIEQGG-KREAIDEVLAIMAEHKSLDYAMDRAKQEAQKAVDAIQI 307 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +K++L+ + + R Sbjct: 308 LPESEYKQALISLAYLSVDR 327 >gi|149913258|ref|ZP_01901792.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b] gi|149813664|gb|EDM73490.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b] Length = 333 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 147/312 (47%), Positives = 203/312 (65%), Gaps = 1/312 (0%) Query: 12 MEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 M VN LI +R+ S IP+V +L+ +GGKRLRPMLTLATA M Y G V LA Sbjct: 22 MAAVNTLIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLTLATADMCGYGGAFDVHLAAT 81 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L ++AF +++E + L Sbjct: 82 VEFIHTATLLHDDVVDESQQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPGNLRVL 141 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + LS A +AEGE+ QLS +++L E YL V++ KTA LFSAA EV +IA + Sbjct: 142 DILSNAAAVIAEGEVLQLSAARDLKTDENIYLQVVRGKTAALFSAATEVGGVIADAPEAQ 201 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +AL YG LGIAFQ+VDD+LDY+G+ N GKN+G+DFR K TLPVI A + E+ Sbjct: 202 IKALFDYGDALGIAFQIVDDLLDYQGDSNATGKNVGDDFRERKLTLPVIKAVAAADETER 261 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FW TI G+ +L+ A +++++ AL T A S+ KAK ++ LPD + + L Sbjct: 262 AFWIRTIEKGRQEDGDLQHALDLLKKHGALEATRQDALSWAAKAKSAMDALPDHAVRGML 321 Query: 311 MEVVDFCLQRLN 322 ++ D+ + R+N Sbjct: 322 TDLADYVVARVN 333 >gi|254483435|ref|ZP_05096664.1| polyprenyl synthetase superfamily protein [marine gamma proteobacterium HTCC2148] gi|214036309|gb|EEB76987.1| polyprenyl synthetase superfamily protein [marine gamma proteobacterium HTCC2148] Length = 320 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 197/320 (61%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + + E+VN LI+ ++ SDV+M+ ++ Y++ +GGKRLRP+L L TA Sbjct: 1 MQDIRSAVAAEFEQVNHLIIDQLHSDVDMVENIGHYIVDAGGKRLRPLLVLLTAAAFGRC 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + + A IEFIHTATLLHDDVVD S+LRRG+ A +GN SVLVGDFL ++AF + Sbjct: 61 GPDQIKFAAVIEFIHTATLLHDDVVDISSLRRGRPTANAEFGNAPSVLVGDFLYTRAFQL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ + L ++ T+AEGE+ QL + N D TE+ YL VI KTA+LF+A + Sbjct: 121 MVQLGDMDILTHMANTTNTIAEGEVLQLVRAGNADTTEQQYLDVITRKTAILFAAGCYGA 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + ++SV Q + S+G+NLGIAFQ++DD+LDY G+ MGKN+G+D GKPTLP+I Sbjct: 181 ATLCHQESSVCQGMHSFGLNLGIAFQMIDDILDYEGDPAAMGKNVGDDLTEGKPTLPLIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + GTK E+ + I + + E++++ ++ AL ++ +A Y A L Sbjct: 241 TLEHGTKEEQALVRRAITEK--TAEDIEQVLAAVQRCGALNYSKQQARKYHNLALAELAA 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS + SL V + R Sbjct: 299 LPDSPARASLQAVTALSINR 318 >gi|33599305|ref|NP_886865.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50] gi|33575351|emb|CAE30814.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50] Length = 321 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 195/320 (60%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L DM+ V+ +I R+ SDV +I + Y+I +GGKR+RP + L A L Y+ Sbjct: 3 LPELIAPIADDMKAVDAVIRDRLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LLA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M Sbjct: 63 GTHHQLLAAVVEFIHTATLLHDDVVDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S ++ LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V Sbjct: 123 MVEADSMRIMQILSQATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG A +YG ++G AFQLVDDVLDY G+ + +GKN+G+D R GKPTLP+I Sbjct: 183 AVLAGASPEQETAAAAYGRHVGAAFQLVDDVLDYSGDAHALGKNVGDDLREGKPTLPLIR 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + GT ++ + I G+ + +A ++ AL A + + A+ +L Sbjct: 243 VMETGTPEQRELIREAIKTGQADFAAVAQA---IQATDALAHARQAAENEAELARQALSA 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S ++KSL+E F + R Sbjct: 300 FPVSLYQKSLLEFCAFAVNR 319 >gi|296284709|ref|ZP_06862707.1| geranylgeranyl pyrophosphate synthase [Citromicrobium bathyomarinum JL354] Length = 340 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 148/320 (46%), Positives = 208/320 (65%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + LT M VN +IL R+ S++ +IP + +LI GGKRLRPMLTLA A ++ Y Sbjct: 19 IDAMLSLTASGMNAVNTVILDRMQSEIPLIPSLAGHLISGGGKRLRPMLTLAGAELVGYN 78 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA A+EFIHTATLLHDDVVD S +RRGK AA +++GN +VLVGDFL S+AF + Sbjct: 79 GTRHHKLAAAVEFIHTATLLHDDVVDGSEMRRGKAAANIIFGNPATVLVGDFLFSRAFEL 138 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S + L+ LS + +AEGE+ QL+ + + +E+ YL +I SKTA LF+AA ++ Sbjct: 139 MTEDGSLKVLKILSSASAIIAEGEVAQLTSQRKITTSEQRYLDIIGSKTAALFAAASRIA 198 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A ++ QAL YG NLGIAFQLVDD LDY + EMGK+ G+DFR GK TLPVIL Sbjct: 199 AVVAECSDAEEQALDDYGRNLGIAFQLVDDALDYSSDAAEMGKDRGDDFREGKMTLPVIL 258 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+ RG E+ FW++ I + S E+L A ++ + + T RA + Q A D+L Sbjct: 259 AYARGDAEERKFWEAAILGHRTSDEDLAHAVSLVERHDCVTATRERARHFAQMAADALSI 318 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PD +++++E F + R Sbjct: 319 FPDGKAREAMVEAAHFAVAR 338 >gi|304386506|ref|ZP_07368794.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091] gi|304339335|gb|EFM05407.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091] Length = 324 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 125/322 (38%), Positives = 194/322 (60%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++++ S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVDSGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ +ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + S +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENADRS--YFEKIHDYVVRSDALAYSIGEARKAVDCAVAALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K +++++ L R++ Sbjct: 303 LPDSEVKDAMIQLAKESLVRVS 324 >gi|163738897|ref|ZP_02146310.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107] gi|161387702|gb|EDQ12058.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107] Length = 332 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 143/320 (44%), Positives = 202/320 (63%), Gaps = 1/320 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 ML +M VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A + Y G Sbjct: 12 MLAATLSDEMAAVNTLIQTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYSG 71 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DNHV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F ++ Sbjct: 72 DNHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLM 131 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +ET S L+ L+ + T+AEGE+ Q++ + +L E YL V++ KTA LFSAA + Sbjct: 132 VETGSLRVLDILANASATIAEGEVLQMTAASDLATDEGIYLQVVRGKTAALFSAATQAGG 191 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A + AL +YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI A Sbjct: 192 VVANAPETQIDALFAYGDALGIAFQIADDLLDYQGDSAATGKNVGDDFRERKLTLPVIKA 251 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + T E+ FW TI G+ +L A +M + L T + A + KA+++L L Sbjct: 252 VAQATAEERGFWVRTIEKGRQDEGDLDHALALMDKYDTLTATRHDAMDWVAKAQNALTAL 311 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 PD ++ L ++ D+ + RL Sbjct: 312 PDDPIRQMLHDLADYVVARL 331 >gi|77464324|ref|YP_353828.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase [Rhodobacter sphaeroides 2.4.1] gi|57115620|gb|AAW33555.1| decaprenyl diphosphate synthase [Rhodobacter sphaeroides] gi|77388742|gb|ABA79927.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Rhodobacter sphaeroides 2.4.1] Length = 333 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 139/315 (44%), Positives = 206/315 (65%), Gaps = 1/315 (0%) Query: 8 TLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y G H+ Sbjct: 18 LAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIH 77 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +++ET S Sbjct: 78 LAATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGS 137 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA EV ++AGV Sbjct: 138 LRVMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGV 197 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI A + Sbjct: 198 PEAQVEALHAYGDALGIAFQIVDDLLDYGGVDAQIGKNTGDDFRERKLTLPVIKAVAQAD 257 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW+ I G +L++A IM + A+ A + A+++L LP+ Sbjct: 258 AEERAFWQRVIEKGDQREGDLEQAHAIMSRHGAMEAARQDALRWVTVAREALGQLPEHPL 317 Query: 307 KKSLMEVVDFCLQRL 321 ++ L ++ DF ++R+ Sbjct: 318 REMLHDLADFVVERI 332 >gi|53802938|ref|YP_115384.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str. Bath] gi|53756699|gb|AAU90990.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str. Bath] Length = 340 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 140/317 (44%), Positives = 202/317 (63%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + L + V+ LIL+ + SDV +I + +Y++ SGGKRLRPML L +A L Y GD+ Sbjct: 24 IRRLVDGEAAAVDSLILRELHSDVVLINQIGQYIVGSGGKRLRPMLHLLSAKALGYPGDH 83 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA IEFIHTATLLHDDVVD+SALRRG+ +A +WGN SVLVGD+L S++F +++ Sbjct: 84 HITLAAVIEFIHTATLLHDDVVDESALRRGQDSANALWGNSASVLVGDYLYSRSFELMVR 143 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + ++ LS +AEGE+ QL N E YL VI KTA+LFSAA ++++++ Sbjct: 144 VQDMRVMDILSRTTTAIAEGEVLQLLNCNNPATDEGRYLDVISRKTAILFSAAAQLAAVL 203 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG ++V ++LK+YG LGIAFQL DDVLDY+ + E GKN+G+D GKPTLP+I A Sbjct: 204 AGSSHAVEESLKNYGTYLGIAFQLKDDVLDYKADPEEWGKNLGDDLAEGKPTLPLIYALS 263 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + + E + I G+ E+ KK + ++ A+ TE RA KA + + LP+ Sbjct: 264 QSSGAEAELLRQAIEHGE--REHFKKVYAVIESTDAISYTERRARDAANKAIEQVTHLPE 321 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K +L+ + F + R Sbjct: 322 SGYKDALIALARFAVDR 338 >gi|254805638|ref|YP_003083859.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14] gi|254669180|emb|CBA07918.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14] gi|325145122|gb|EGC67404.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240013] gi|325205404|gb|ADZ00857.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M04-240196] Length = 324 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 126/322 (39%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYALAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + S +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENADRS--YFEKIHDYVVRSDALAYSIGEARKAVDCAVTALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K +++++ L R++ Sbjct: 303 LPDSEVKDAMIQLAKESLVRVS 324 >gi|33151879|ref|NP_873232.1| octaprenyl pyrophosphate synthetase [Haemophilus ducreyi 35000HP] gi|33148100|gb|AAP95621.1| octaprenyl-diphosphate synthase [Haemophilus ducreyi 35000HP] Length = 327 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ L +DM+ V+ IL ++ S+V +I + Y+I GGKR+RP++ + A L Y Sbjct: 7 LEQIQALAQQDMQAVDQEILAQLNSEVPLINQLGHYIISGGGKRIRPLIAVLAANALCYT 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ A IEF+HTATLLHDDVVD+SALRRG+ A ++GN SVLVGDF+ +++F M Sbjct: 67 GRKHLTCAAFIEFVHTATLLHDDVVDESALRRGRETANAIFGNAASVLVGDFIYTRSFQM 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + S E L+ +S LAEGE++QL + TE +Y+ VI +KTA LF AA + Sbjct: 127 MTSVDSLEVLKVMSAATNALAEGEVQQLMNINDPHTTEANYMRVIYNKTARLFEAATQCV 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + QALK+YG LG AFQLVDD+LDY + + GKN+G+DF GKPTLP++ Sbjct: 187 AIVAGASQQIEQALKAYGCYLGTAFQLVDDILDYSAKAEQFGKNVGDDFVEGKPTLPLLH 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q + + + + I G + IM E+++L RA QKA +L Sbjct: 247 ALQHANEAQASMIREAIEHGG-ERAKIPMVLAIMAEHKSLEYAMARAKQEAQKAVAALDI 305 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L D+ +KK+L+ + + R Sbjct: 306 LADTEYKKALISLAYLSVDR 325 >gi|121998628|ref|YP_001003415.1| trans-hexaprenyltranstransferase [Halorhodospira halophila SL1] gi|121590033|gb|ABM62613.1| Trans-hexaprenyltranstransferase [Halorhodospira halophila SL1] Length = 323 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 131/322 (40%), Positives = 194/322 (60%), Gaps = 3/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +L DM +VN LI +R+ SDV +I + +++ SGGKRLRPM+ L A Y+ Sbjct: 3 LDAIRELAADDMAEVNRLIEERLSSDVVLINQLAYHIVHSGGKRLRPMVVLLAARACGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +HV LA IEFIHTATLLHDDVVD S +RRGK A +WGN+ SVLVGDFL ++AF M Sbjct: 63 GKDHVQLAAIIEFIHTATLLHDDVVDGSDMRRGKQTAHTIWGNEASVLVGDFLYTRAFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S L L+ T+A GE+ QL D+TE DY VI KTA LF A + Sbjct: 123 MVELDSMAVLRILARATNTIARGEVMQLMNVHEPDLTEADYRQVIYRKTATLFEAGCQNG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG+ ++ +AL +YG +LG A+QLVDD LDY G+ +E+GKNIG+D GK T+P+I Sbjct: 183 AVLAGLDDAGCEALAAYGRHLGTAYQLVDDALDYSGDASEIGKNIGDDLAEGKTTMPLIH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL-R 299 A + G +++ + I G + + ++ + + + T A ++A + L Sbjct: 243 AMREGEPADRDLIRQAIEAGGL--DQMEAVGRAIEKTGSAEYTRRLAEVEVEQAVEQLTS 300 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 +P S W+ +L+ + + R Sbjct: 301 AVPGSPWRDALVHLARNSISRT 322 >gi|33595027|ref|NP_882670.1| octaprenyl-diphosphate synthase [Bordetella parapertussis 12822] gi|33565103|emb|CAE40054.1| octaprenyl-diphosphate synthase [Bordetella parapertussis] Length = 321 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 194/320 (60%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L DM+ V+ +I R+ SDV +I + Y+I +GGKR+RP + L A L Y+ Sbjct: 3 LPELIAPIADDMKAVDAVIRDRLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LLA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M Sbjct: 63 GTHHQLLAAVVEFIHTATLLHDDVVDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S ++ LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V Sbjct: 123 MVEADSMRIMQILSQATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG A +YG +G AFQLVDDVLDY G+ + +GKN+G+D R GKPTLP+I Sbjct: 183 AVLAGASPEQETAAAAYGRRVGTAFQLVDDVLDYSGDAHALGKNVGDDLREGKPTLPLIR 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + GT ++ + I G+ + +A ++ AL A + + A+ +L Sbjct: 243 VMETGTPEQRELIREAIKTGQADFAAVAQA---IQATDALAHARQAAENEAELARQALSA 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S ++KSL+E F + R Sbjct: 300 FPVSLYQKSLLEFCAFAVNR 319 >gi|309783042|ref|ZP_07677761.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA] gi|308918150|gb|EFP63828.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA] Length = 325 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 130/313 (41%), Positives = 194/313 (61%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L Y+G++ L Sbjct: 13 VAEDMRAVDAVIRRRLGSEVVLINQIGEYIISAGGKRLRPVILLLVANALGYKGEHQHEL 72 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 73 AAVVEFIHTATLLHDDVVDESDLRRGRKTANAVFGNAASVLVGDFLYSRAFQMMVQANSM 132 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G Sbjct: 133 RIMQILADATNIISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGAD 192 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + +A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ Sbjct: 193 AATEEAAAEYGRRIGTAFQIVDDLLDYTSTADQMGKNAGDDLREGKPTLPLIHLLSNGTE 252 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G E+ F ++ + AL T A A+ + LP S ++ Sbjct: 253 EQRALVRQAIEQG--GTEHFDAIFAAIQASGALEYTRQAAEREAAAAEAAANALPPSLFR 310 Query: 308 KSLMEVVDFCLQR 320 ++L+++ F LQR Sbjct: 311 QTLIDLCAFSLQR 323 >gi|325203440|gb|ADY98893.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240355] Length = 324 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 125/322 (38%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ +ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + S +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENADRS--YFEKIHDYVVRSDALAYSIGEARKAVDCAVAALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K +++++ L R++ Sbjct: 303 LPDSEVKDAMIQLAKESLVRVS 324 >gi|15676243|ref|NP_273375.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58] gi|161870743|ref|YP_001599916.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442] gi|218768897|ref|YP_002343409.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491] gi|7225547|gb|AAF40771.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58] gi|121052905|emb|CAM09257.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491] gi|161596296|gb|ABX73956.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442] gi|254670157|emb|CBA05202.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha153] gi|316984329|gb|EFV63303.1| polyprenyl synthetase family protein [Neisseria meningitidis H44/76] gi|319411198|emb|CBY91603.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase; OPP synthetase) [Neisseria meningitidis WUE 2594] gi|325128912|gb|EGC51766.1| octaprenyl-diphosphate synthase [Neisseria meningitidis N1568] gi|325140975|gb|EGC63481.1| octaprenyl-diphosphate synthase [Neisseria meningitidis CU385] gi|325198983|gb|ADY94439.1| octaprenyl-diphosphate synthase [Neisseria meningitidis G2136] gi|325199520|gb|ADY94975.1| octaprenyl-diphosphate synthase [Neisseria meningitidis H44/76] Length = 324 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 125/322 (38%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ +ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + S +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENADRS--YFEKIHDYVVRSDALAYSIGEARKAVDCAVTALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K +++++ L R++ Sbjct: 303 LPDSEVKDAMIQLAKESLVRVS 324 >gi|296313619|ref|ZP_06863560.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC 43768] gi|296839857|gb|EFH23795.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC 43768] Length = 324 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 126/322 (39%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DGKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++++ S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVDSDSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + S +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENADRS--YFEKIHNYVVRSDALAYSIGEARKAVDCAVAALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K +++++ L R++ Sbjct: 303 LPDSEVKDAMIQLAKESLVRVS 324 >gi|261391852|emb|CAX49311.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase; OPP synthetase) [Neisseria meningitidis 8013] Length = 324 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 125/322 (38%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYALAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ +ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + S +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENADRS--YFEKIHDYVVRSDALAYSIGEARKAVDCAVTALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K +++++ L R++ Sbjct: 303 LPDSEVKDAMIQLAKESLVRVS 324 >gi|261401641|ref|ZP_05987766.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970] gi|313667728|ref|YP_004048012.1| octaprenyl-diphosphate synthase [Neisseria lactamica ST-640] gi|269208281|gb|EEZ74736.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970] gi|313005190|emb|CBN86623.1| octaprenyl-diphosphate synthase [Neisseria lactamica 020-06] Length = 324 Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 128/322 (39%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I SGGKRLRP++T+ + Y Sbjct: 5 LPYFQQHLSEDLAKVNKVINRAVQSDVALIAQIGTYIIGSGGKRLRPIMTILAGRSVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DDKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + S +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENADRS--YFEKIHDYVVRSDALAYSIGEARKAVDCAVAALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K++++ + L R++ Sbjct: 303 LPDSEAKEAMIRLARESLVRVS 324 >gi|119384763|ref|YP_915819.1| trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222] gi|119374530|gb|ABL70123.1| Trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222] Length = 333 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 146/325 (44%), Positives = 220/325 (67%), Gaps = 4/325 (1%) Query: 2 KMLEDLTLK---DMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALML 57 K L+ L+ + DM++VN LI +R+ S IP+V +L+ +GGKRLRPML LA A + Sbjct: 9 KPLDRLSAELAGDMDRVNALIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLVLAAARLC 68 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 Y G++H+LLA A+EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++ Sbjct: 69 GYAGESHILLAAAVEFIHTATLLHDDVVDESQQRRGRPTANLLWDNKSSVLVGDYLFARS 128 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 F ++ +T+S + + L+ + T+AEGE+ QL+ ++++ TE+ Y+ +++ KTA LFSAA Sbjct: 129 FQLMADTESMQVMRILANASATIAEGEVLQLTAAQDVSTTEDTYIQIVRGKTAALFSAAT 188 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 E +++AG +V++AL YG LGIAFQ+VDD+LDY G + +GKN+G+DFR K TLP Sbjct: 189 EAGAVVAGADPAVQRALFDYGDALGIAFQIVDDLLDYGGSTSSIGKNVGDDFRERKLTLP 248 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 VI A R + E+ FW+ TI G+ +L A I+R AL A ++ Q+AK + Sbjct: 249 VIKAIARADEVERAFWERTIGQGQQDEADLATALEILRRREALEAARADAIAWAQRAKAA 308 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 L+ PD ++ L ++ DF + RL+ Sbjct: 309 LQAAPDQPLRRILADLADFVVSRLS 333 >gi|89052978|ref|YP_508429.1| trans-hexaprenyltranstransferase [Jannaschia sp. CCS1] gi|88862527|gb|ABD53404.1| Trans-hexaprenyltranstransferase [Jannaschia sp. CCS1] Length = 335 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 146/322 (45%), Positives = 202/322 (62%), Gaps = 3/322 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L D+ VN LI R+ S IP+V +L+ +GGKR+RPMLTLA A + Y GD Sbjct: 14 LSAALKDDLTAVNTLIRARMASKHAPRIPEVTAHLVEAGGKRIRPMLTLACARLCGYSGD 73 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 +HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W NQ+SVLVGD+L ++AF +++ Sbjct: 74 DHVKLAATVEFIHTATLLHDDVVDESEQRRGRPTANLLWDNQSSVLVGDYLFARAFQLMV 133 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E + L+ LS A T+AEGE+ QL+++ N++ EE YL VI+ KTA LF AA EV + Sbjct: 134 EPGNLRVLDILSNAAATIAEGEVLQLTVASNIETPEETYLQVIRGKTAALFEAACEVGGV 193 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRG--EVNEMGKNIGEDFRNGKPTLPVIL 240 IAG + QAL +YG LG+AFQ+ DD+LD+ G ++ KNIG+DFR K TLPVI Sbjct: 194 IAGRDTFIIQALATYGDGLGVAFQMADDLLDWGGVDGGAQLDKNIGDDFRERKMTLPVIR 253 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A E+ FW TI G +L++A +++ + L T A + +AK +L Sbjct: 254 AIAAANGDERAFWARTIGKGDQRDGDLEQALDVLQRHGTLASTRDAANDHVARAKAALTN 313 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD + L ++ D+ + RLN Sbjct: 314 LPDDPLRDMLADLADYVVARLN 335 >gi|220936362|ref|YP_002515261.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] gi|219997672|gb|ACL74274.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 322 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 137/320 (42%), Positives = 189/320 (59%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM VN I +R+ S V +I + Y+I SGGKRLRP+L L +A Sbjct: 3 LDQIRALVADDMNAVNDRIRERLQSSVVLINQLGHYIINSGGKRLRPLLVLLSARACGAG 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 H+ LA IEFIHTATLLHDDVVD S LRRG+ A ++GN+ SVLVGDFL S++F M Sbjct: 63 DRRHIDLAAIIEFIHTATLLHDDVVDASELRRGRETANALFGNEASVLVGDFLYSRSFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S +E L+ T+AEGE+ QL + D EE Y+ VI+SKTA LF AA + Sbjct: 123 MVEIGSMRVMEILAHTTNTIAEGEVLQLLNCHDADTPEERYMEVIQSKTAKLFEAAARIG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G SV QA+ +YGM+LG AFQL+DDVLDY EMGKN+G+D GKPTLP+I Sbjct: 183 AVLGGQPESVEQAMAAYGMHLGTAFQLIDDVLDYGASAEEMGKNMGDDLAEGKPTLPLIH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + G + + I G + + I++ +L T A + +A SL Sbjct: 243 AMRVGDADQAGLIREAIEQGGRDYAD--RVLGIIQATGSLDYTRAVAAAEADRAAASLAV 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ +++L + F + R Sbjct: 301 LPDTPERQALEFLARFSVTR 320 >gi|309378666|emb|CBX22737.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 324 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 127/322 (39%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I SGGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALIAQIGTYIIGSGGKRLRPIMTILAGRSVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 NEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + S +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENADRS--YFEKIHDYVVRSDALAYSIGEARKAVDCAVAALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K++++ + L R++ Sbjct: 303 LPDSEAKEAMIRLARESLVRVS 324 >gi|329889422|ref|ZP_08267765.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC 11568] gi|328844723|gb|EGF94287.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC 11568] Length = 367 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 144/322 (44%), Positives = 204/322 (63%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L DM V+ LI+ R+ SDV +IP + ++L+ +GGKRLRP+LT+A A + Sbjct: 44 VDALVHLAKDDMAAVDALIIARMQSDVPVIPLLAEHLVSAGGKRLRPLLTVAAARAIGQT 103 Query: 61 G--DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 G D LA ++EFIHTATLLHDD+VD S +RRGKVAA L+WG+ +SVLVGDFL ++AF Sbjct: 104 GAIDGPKKLAASVEFIHTATLLHDDIVDGSEMRRGKVAAHLIWGSASSVLVGDFLFARAF 163 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +++ET S AL L+ + +AEGE+ QL+ + +L++ + YL +I++KTA LF+AA E Sbjct: 164 ELMVETDSLRALGILARASAVIAEGEVLQLTRAHDLNLDLDTYLQIIRAKTAELFAAAAE 223 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 ++ AG + AL+ YGM LGIAFQL DD LDY G +GKN G+DF GK TLP+ Sbjct: 224 SGAVGAGATDEQVAALRDYGMALGIAFQLADDALDYGGATETLGKNAGDDFNEGKATLPL 283 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 +LA QR E FW I G E+ +A ++ + A+ T A Y +AK +L Sbjct: 284 LLAVQRTKGTEDLFWDRVITKGDRKPEDFDRARQLIVASGAVEATLDTASEYADRAKTAL 343 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 + LP W+ +L + DF + R Sbjct: 344 QVLPAGPWRSALEALADFAVSR 365 >gi|237747110|ref|ZP_04577590.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS] gi|229378461|gb|EEO28552.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS] Length = 329 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 123/313 (39%), Positives = 191/313 (61%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 L D+E V+ +I +++ SD+ ++ + +YLI +GGKR+RP+L L A L Y+G H L Sbjct: 17 VLPDLEAVDRIIRQQMHSDIALVGRIAEYLINAGGKRIRPVLVLLMAKALGYQGKQHQTL 76 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A IEFIHTATLLHDDVVD+S LRRG +A ++GN +SVLVGDFL ++AF M++ + Sbjct: 77 AATIEFIHTATLLHDDVVDESELRRGIPSANALFGNASSVLVGDFLYTRAFQMMVSVGNM 136 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 LE L+ +AEGE+ QL ++N + E+ Y+ VI +KTA LF A+ + +L+A V Sbjct: 137 RILEVLAEATNLIAEGEVMQLMNARNAAIDEDGYMKVIYAKTAKLFEASSVLGALVAHVS 196 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A +G +G+AFQL+DD+LDY G+ GKN+G D + GK TLP+I + G++ Sbjct: 197 EEKIGAAARFGRAVGMAFQLIDDMLDYAGDTGVTGKNVGNDLKEGKMTLPLIYLMKNGSE 256 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++K + ++ + S +R + A+ T +A +A +L L +K Sbjct: 257 KQKASVRKSVEENDESC--FPAVLNAVRSSGAMDYTYQKARQAVAEAVQALSALDSGQYK 314 Query: 308 KSLMEVVDFCLQR 320 KSL+++ F ++R Sbjct: 315 KSLLKLSSFSVER 327 >gi|270159180|ref|ZP_06187836.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968] gi|289165992|ref|YP_003456130.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] gi|269987519|gb|EEZ93774.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968] gi|288859165|emb|CBJ13094.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] Length = 322 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 124/320 (38%), Positives = 198/320 (61%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L D VN LI+ +I S + +I + ++I SGGKRLRP+L L T+ Y+ Sbjct: 3 IDSIRALINDDFNAVNNLIINKIESQIGLIDKMSHHMIESGGKRLRPLLVLLTSNACGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ S+LVGD+L +Q+ + Sbjct: 63 GQDHIDLAAMVEFFHTATLLHDDVIDESTLRRGRQTANNIWGSKASILVGDYLFTQSIEL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ + E L+ + A ++ GE++QL+ N +T E+Y VI++KTA+LF+AA + Sbjct: 123 MVDINNPEVLKLFARTALEISCGEVKQLTNRHNPALTFEEYFDVIRAKTALLFAAAACIG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ ++ AL +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I Sbjct: 183 PILSNSSKEMQNALYAYGLHLGNAFQLIDDALDYCSDAKTIGKNIGDDLADGKATLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q GT+ +K + ++ G + L + + E +A+ T+ A A +L Sbjct: 243 ALQHGTEVQKQQIEESLKHGTLDF--LPEILGALEETKAIEYTKGIAAKEVNTAISNLAL 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +K +L+E+ F L R Sbjct: 301 LPDSKYKNALIELAQFALLR 320 >gi|332188683|ref|ZP_08390398.1| polyprenyl synthetase family protein [Sphingomonas sp. S17] gi|332011300|gb|EGI53390.1| polyprenyl synthetase family protein [Sphingomonas sp. S17] Length = 336 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 146/320 (45%), Positives = 216/320 (67%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM VN +I+ R+ S++ +IP + +LI GGKR+RPMLTLA+A +L YR Sbjct: 15 LDPMIRLVADDMNAVNQVIIDRMRSEIPLIPQLAGHLISGGGKRMRPMLTLASAQLLGYR 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H +LA A+EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S++F + Sbjct: 75 GTSHHVLAAAVEFIHTATLLHDDVVDGSDLRRGRRTANIIWGNPASVLVGDFLFSRSFQL 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ S + L LS + +AEGE+ QL+ + + + EE YL +I +KTA LF+AA ++ Sbjct: 135 MVDAGSLKVLNILSGASAVIAEGEVNQLTAVRQVGLPEERYLSIIDAKTAALFAAACRIA 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + AL++YG NLGIAFQL+DD +DY + MGK+ G+DFR GK TLPVIL Sbjct: 195 AVVAERPEAEELALEAYGRNLGIAFQLIDDAIDYVSDAGTMGKDAGDDFREGKMTLPVIL 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+ RG + E+ FWK + + S ++ +A ++R++RA+ DT RA YG A +++R Sbjct: 255 AYARGNEEERAFWKDAVEGRRTSDQDFTRAIALVRKSRAVDDTMARARHYGGLAIEAIRG 314 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 D K +++E V+F + R Sbjct: 315 FADGPAKAAMIEAVEFAVAR 334 >gi|78484685|ref|YP_390610.1| trans-hexaprenyltranstransferase [Thiomicrospira crunogena XCL-2] gi|78362971|gb|ABB40936.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2] Length = 321 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 137/320 (42%), Positives = 196/320 (61%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L D+E + LIL ++ SDV +I + Y+I SGGKRLRP+L L +A +Y+ Sbjct: 3 LSQIRKLIQDDIEATDQLILSKLSSDVVLINQIGHYIINSGGKRLRPLLVLLSAHACDYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H+ LA IEFIHT+TLLHDDVVD+S RRG A VWGN SVLVGDFL S++F M Sbjct: 63 GKDHLTLAAVIEFIHTSTLLHDDVVDESETRRGNQTANEVWGNAASVLVGDFLYSRSFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E +E +S +AEGE+ QL + D T + Y+ VI KTA LF AA + Sbjct: 123 MVEPGIMRVMEVMSETTNVIAEGEVLQLLNCHDADTTSQRYMEVIHRKTAKLFEAATLLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G + + A SYG +LG AFQL+DD LDY + +E+GKN+G+D GKPTLP+I Sbjct: 183 PIL-GKKPELESAFSSYGRHLGAAFQLIDDALDYTADADELGKNLGDDLAEGKPTLPLIY 241 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + GT+ EK+ + I I + LK+ I++ + A+ T+ A +KAK +L Sbjct: 242 VLENGTENEKSLIRKAIETEGIKL--LKEVTSIIQTSGAIQYTQEVATQEAEKAKAALAP 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L DS K++L+ + D +QR Sbjct: 300 LNDSEIKQALLSLADLAVQR 319 >gi|260431561|ref|ZP_05785532.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis ITI-1157] gi|260415389|gb|EEX08648.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis ITI-1157] Length = 332 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 151/322 (46%), Positives = 211/322 (65%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +L +M+ VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y Sbjct: 11 ERLAELLAGEMDAVNTLIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLFGYG 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD+H+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L S++F + Sbjct: 71 GDHHIRLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFSRSFQL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET S L+ L+ + T+AEGE+ Q++ + +L E YL V++ KTA LFSAA EV Sbjct: 131 MVETGSLRVLDILANASATIAEGEVLQMTAATDLRTDEAVYLQVVRGKTAALFSAATEVG 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG +AL +YG LGIAFQ+ DD+LDY+G+ GKN+G+DFR K TLPVI Sbjct: 191 GVIAGASEEQVRALFAYGDALGIAFQIADDLLDYQGDSKATGKNVGDDFRERKLTLPVIK 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T E+ FW+ TI G+ +L+ A +MR+ R L T A + KAK +L Sbjct: 251 AVAQATPEERAFWERTIEKGRQQEGDLEHALGLMRKYRTLEATRADALGWAAKAKAALAV 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD + L ++ D+ + RLN Sbjct: 311 LPDHEIRDLLRDMADYVVARLN 332 >gi|326385511|ref|ZP_08207150.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM 19370] gi|326210050|gb|EGD60828.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM 19370] Length = 337 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 140/320 (43%), Positives = 204/320 (63%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L M VN +IL R+ S + +IP + +LI GGKR+RPMLTLA A ++ Y Sbjct: 16 LQPLLALVADGMNSVNAVILDRMQSRIPLIPALAGHLIAGGGKRMRPMLTLAGAELVGYG 75 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA A+EFIHTATLLHDDVVD S +RRGK AA +++GN +VLVGDFL S++F + Sbjct: 76 GSRHYKLAAAVEFIHTATLLHDDVVDGSDMRRGKKAANIIYGNPATVLVGDFLFSRSFEL 135 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S + L LS + + EGE+ QL + ++ +EE YL +I KTA LF+AA ++ Sbjct: 136 MVEDGSIKVLRILSNASAIITEGEVDQLIAQREIETSEERYLAIINGKTAALFAAACRIA 195 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A AL +YG +LG AFQL DD +DY + + MGK+ G+DFR GK TLPVIL Sbjct: 196 AVVAERPEDEELALDAYGRHLGTAFQLADDAIDYDSDADVMGKDKGDDFREGKMTLPVIL 255 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+ RG E+ FW+ I + +L A ++R++ A++ T RA Y Q+A D++ Sbjct: 256 AYARGNAEEREFWRRAIAGERNGEADLAHAIELIRKHDAVLATRERARHYAQRAIDAIAS 315 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S+ K +++E +F + R Sbjct: 316 FPASAAKSAMIEAAEFAVAR 335 >gi|37678653|ref|NP_933262.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] gi|37197393|dbj|BAC93233.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] Length = 306 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 124/295 (42%), Positives = 179/295 (60%), Gaps = 1/295 (0%) Query: 26 DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVV 85 DV +I + Y+I GGKRLRP+L + +A L Y+G+ H A IEFIHTATLLHDDVV Sbjct: 11 DVSLINQLGFYIISGGGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDVV 70 Query: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGEL 145 D+S +RRGK A +GN SVLVGDF+ +++F M+ E S + L+ +S +AEGE+ Sbjct: 71 DESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNIIAEGEV 130 Query: 146 RQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAF 205 QL + D TEE Y+ VI SKTA LF AA ++ +++ V AL++YG LG AF Sbjct: 131 LQLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAF 190 Query: 206 QLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVE 265 QL+DDV+DY + EMGKN+G+D GKPTLP++ A + + I + +E Sbjct: 191 QLIDDVMDYTSDGEEMGKNVGDDLAEGKPTLPLLHAMRHTNAENAQMIREAIENAN-GME 249 Query: 266 NLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 L +M++ +L TE +A KA L+ LP+S +K++L+ + ++R Sbjct: 250 RLDDILAVMQQAGSLTYTEAKAMEEADKAIAELQVLPESEYKQALIALAHMAVKR 304 >gi|166711277|ref|ZP_02242484.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 332 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 126/322 (39%), Positives = 179/322 (55%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E E+GK++G+D GK TLP+I Sbjct: 193 ALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAAELGKSLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + L + RA Y A+ +L Sbjct: 253 AMAHSDATTRERLRQIVEQGDAA--AMPDVLAAIHATGGLDYSRQRAGEYAAAAEQALET 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 311 LPYSPAVAALRGLARYAVERTH 332 >gi|325132994|gb|EGC55670.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M6190] gi|325136902|gb|EGC59499.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M0579] gi|325138982|gb|EGC61531.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ES14902] Length = 324 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 125/322 (38%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DGKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++++ S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVDSDSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ +ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + S +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENADRS--YFEKIHDYVVRSDALAYSIGEARKAVDCAVTALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K +++++ L R++ Sbjct: 303 LPDSEVKDAMIQLAKESLVRVS 324 >gi|121635537|ref|YP_975782.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18] gi|120867243|emb|CAM11012.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18] Length = 324 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 125/322 (38%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DGKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++++ S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVDSDSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ +ALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + S +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENADRS--YFEKIHDYVVRSDALAYSIGEARKAVDCAVAALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS K +++++ L R++ Sbjct: 303 LPDSEVKDAMIQLAKESLVRVS 324 >gi|221640208|ref|YP_002526470.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131] gi|221160989|gb|ACM01969.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131] Length = 331 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 137/315 (43%), Positives = 205/315 (65%), Gaps = 1/315 (0%) Query: 8 TLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 +DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y G H+ Sbjct: 16 LAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIH 75 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +++ET S Sbjct: 76 LAATVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGS 135 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA +V ++AG+ Sbjct: 136 LRVMDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATQVGGVVAGM 195 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI A + Sbjct: 196 PEAQVEALHAYGDALGIAFQIVDDLLDYGGVDAQIGKNTGDDFRERKLTLPVIKAVAQAD 255 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW+ I G +L++A IM + A+ A + A+++L LP Sbjct: 256 AEERAFWQRVIEKGDQREGDLEQAHAIMSRHGAMEAARQDALRWVAVAREALGQLPKHPL 315 Query: 307 KKSLMEVVDFCLQRL 321 ++ L ++ DF ++R+ Sbjct: 316 REMLHDLADFVVERI 330 >gi|254495951|ref|ZP_05108859.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii LLAP12] gi|254354829|gb|EET13456.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii LLAP12] Length = 322 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 127/320 (39%), Positives = 201/320 (62%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + + D VN LI+ +I S + +I D+ ++I SGGKRLRP+L L + Y+ Sbjct: 3 IESIRAAVIDDFNAVNALIVNKIESQIGLIDDMSHHVIESGGKRLRPLLVLLASNACSYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H+ LA +EF HTATLLHDDVVD+S LRRG+ A +WG++ S+LVGD+L +Q+ + Sbjct: 63 GNAHIALAAMVEFFHTATLLHDDVVDESTLRRGRETANNIWGSKASILVGDYLFTQSIEL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++++ + L+ + A ++ GE++QLS N +T E+Y VI++KTA+LF+AA + Sbjct: 123 MVDSGNPAILKLFANTALEISCGEVKQLSNRHNPALTFEEYFDVIRAKTALLFAAAACIG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ V+ +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I Sbjct: 183 PMLSDASKEVQDSLYAYGLHLGNAFQLIDDALDYCSDAKTIGKNIGDDLADGKATLPLIH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q G++R+K ++ G S+E L + I + E +A+ T+ A A L Sbjct: 243 ALQHGSERQKQQIIESLKKG--SLEFLPEILIALEETKAIEYTKKVAAQEIDTALSFLMV 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +K +L ++ F LQR Sbjct: 301 LPDSKYKNALTQLAQFALQR 320 >gi|189425336|ref|YP_001952513.1| polyprenyl synthetase [Geobacter lovleyi SZ] gi|189421595|gb|ACD95993.1| Polyprenyl synthetase [Geobacter lovleyi SZ] Length = 322 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 122/320 (38%), Positives = 194/320 (60%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ +L +D+++V K + SDV +I V +Y++ SGGKR+RP + L A + EY+ Sbjct: 1 MQAALELIGEDLKQVEEQFRKDLESDVPLIRKVGEYVLASGGKRIRPAMLLLAARLCEYQ 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ + LA +EFIHTATLLHDDVVD + LRRG +A +WGN+ SVL+GDFL S++F + Sbjct: 61 GNQAIPLASVVEFIHTATLLHDDVVDSATLRRGLASANTLWGNEASVLIGDFLFSKSFSL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S + L +S +AEGE+ QL + +++TE+ Y+ V+++KTAVL SAA + Sbjct: 121 MVAAGSLDVLRVMSKATTVIAEGEVLQLLYTGEVELTEQQYIEVVRAKTAVLLSAACQCG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ GV QAL +GM LGIAFQL+DD+LDY E GK+IG D GK TLP+I Sbjct: 181 AILGGVSPEQEQALADFGMELGIAFQLMDDILDYTASEEEFGKSIGHDLEEGKLTLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + E+ + I +++ E+ + +++ + T +A L C Sbjct: 241 ALRGCSDEERGAVTAIIEKDELTPEDFRLVSDLVQSYGGIEYTVEKARDCVANCARHLSC 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P +S K +L+++ ++ + R Sbjct: 301 FPANSCKAALLDLAEYVVTR 320 >gi|187930136|ref|YP_001900623.1| Polyprenyl synthetase [Ralstonia pickettii 12J] gi|187727026|gb|ACD28191.1| Polyprenyl synthetase [Ralstonia pickettii 12J] Length = 325 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 128/313 (40%), Positives = 193/313 (61%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM V+ +I +R+ S+V +I + +Y++ +GGKRLRP++ L A L Y+G++ L Sbjct: 13 VAEDMRAVDAVIRRRLGSEVVLINQIGEYIVSAGGKRLRPVILLLVANALGYKGEHQHEL 72 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 73 AAVVEFIHTATLLHDDVVDESDLRRGRKTANAVFGNAASVLVGDFLYSRAFQMMVQANSM 132 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++ Sbjct: 133 RIMQILADATNIISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSDAD 192 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + +A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ Sbjct: 193 AATEEAAAEYGRRIGTAFQIVDDLLDYTSTADQMGKNAGDDLREGKPTLPLIHLLSNGTE 252 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G E+ F ++ + AL T A A+ + LP S ++ Sbjct: 253 EQRALVRQAIEQG--GTEHFDAIFAAIQASGALEYTRQAAEREAAAAEAAANALPPSLFR 310 Query: 308 KSLMEVVDFCLQR 320 ++L+++ F LQR Sbjct: 311 QTLIDLCAFSLQR 323 >gi|84622979|ref|YP_450351.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|122879101|ref|YP_200077.6| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] gi|188577962|ref|YP_001914891.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|84366919|dbj|BAE68077.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522414|gb|ACD60359.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 332 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 126/322 (39%), Positives = 179/322 (55%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ +I +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDAVIRRRLASDVMLINQIADHIISAGGKRLRPMLVILAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E E+GKN+G+D GK TLP+I Sbjct: 193 ALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAAELGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + L + RA Y A+ +L Sbjct: 253 AMAHSDATTRERLRQIVEQGDAA--AMPDVLAAIHATGGLDYSRQRAGEYAAAAEQALDT 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 311 LPYSPAVAALRGLARYAVERTH 332 >gi|85373560|ref|YP_457622.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis HTCC2594] gi|84786643|gb|ABC62825.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis HTCC2594] Length = 340 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 151/320 (47%), Positives = 212/320 (66%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT M VN +IL R+ S++ +IP + +LI GGKRLRPMLTLA A ++ Y+ Sbjct: 19 IEPMLQLTASGMNAVNTVILDRMQSEIPLIPRLAGHLISGGGKRLRPMLTLAGAELVGYQ 78 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA A+EFIHTATLLHDDVVD S +RRGK AA +++GN +VLVGDFL S+AF + Sbjct: 79 GSRHHKLAAAVEFIHTATLLHDDVVDGSEMRRGKAAANIIFGNPATVLVGDFLFSRAFEL 138 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S L+ LS + +AEGE+ QLS + L+ +EE YL +I +KTA LF+AA +S Sbjct: 139 MTEDGSLRVLKILSNASAVIAEGEVAQLSAQRKLETSEERYLDIIGAKTAALFAAASRIS 198 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A +S +AL YG NLG+AFQLVDD +DY + EMGK+ G+DFR GK TLPVIL Sbjct: 199 AVVAECDDSHERALDDYGRNLGVAFQLVDDAIDYDSDAAEMGKDQGDDFREGKMTLPVIL 258 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+ RG + E+ FWK I + S +L A ++ + AL DT RA + ++A D++ Sbjct: 259 AYARGNEDERAFWKDAIGGHRASDADLAHAITLIGRHNALEDTRTRARHFARRAIDAISI 318 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PDS ++++ E F + R Sbjct: 319 FPDSKARQAMAEAALFAVAR 338 >gi|260576245|ref|ZP_05844237.1| Polyprenyl synthetase [Rhodobacter sp. SW2] gi|259021513|gb|EEW24817.1| Polyprenyl synthetase [Rhodobacter sp. SW2] Length = 333 Score = 295 bits (756), Expect = 6e-78, Method: Composition-based stats. Identities = 138/319 (43%), Positives = 201/319 (63%), Gaps = 1/319 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L DM VN LI +R+ S+ IP V +L+ +GGKRLRP+LTLA A + Y G Sbjct: 14 LAAFLAADMLAVNVLIRERMASEHAPRIPQVTAHLVEAGGKRLRPLLTLAAARLCGYGGP 73 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 HV LA +EFIHTATLLHDDVVD+S+ RRG+ A L+W N++SVLVGD+L +++F +++ Sbjct: 74 FHVHLAATVEFIHTATLLHDDVVDESSRRRGRPTANLLWDNKSSVLVGDYLFARSFQLMV 133 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E + L+ L+ + ++AEGE+ QL+ +++L TE YL V++ KTA LFSAA EV + Sbjct: 134 EPGNLRVLDILANASASIAEGEVLQLTAAQDLATTEAIYLQVVRGKTAALFSAATEVGGV 193 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 IAG +AL +YG LG+AFQ+VDD+LDY G +GK++G+DFR K TLPVI A Sbjct: 194 IAGAPADQVKALFTYGDALGVAFQIVDDLLDYGGVAATIGKDVGDDFRERKLTLPVIKAV 253 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 + E+ FW I G + +L++A ++ + AL A + A+D+L LP Sbjct: 254 AKADAEERAFWVRVIEKGHQAEGDLEQAQALLARHGALQAARVDALHWAATARDALAVLP 313 Query: 303 DSSWKKSLMEVVDFCLQRL 321 + L ++ DF ++R+ Sbjct: 314 AHPLRTMLEDLADFVVERI 332 >gi|300702983|ref|YP_003744585.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957] gi|299070646|emb|CBJ41941.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957] Length = 322 Score = 295 bits (756), Expect = 6e-78, Method: Composition-based stats. Identities = 133/313 (42%), Positives = 196/313 (62%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG++H L Sbjct: 10 VAEDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGNHHHEL 69 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 70 AAVVEFIHTATLLHDDVVDESELRRGRQTANAVFGNAASVLVGDFLYSRAFQMMVQADSM 129 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G Sbjct: 130 RVMQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGAD 189 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I +GT+ Sbjct: 190 AATEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIHLLSQGTE 249 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G E+ F ++ + AL T A A +++ LP S ++ Sbjct: 250 EQRALARQAIEQG--GTEHFDAIFSAIQTSGALEYTRKAAEREASAAAEAIIALPPSQFR 307 Query: 308 KSLMEVVDFCLQR 320 ++L+E+ F LQR Sbjct: 308 QTLIELCAFSLQR 320 >gi|261868528|ref|YP_003256450.1| octaprenyl-diphosphate synthase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413860|gb|ACX83231.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Aggregatibacter actinomycetemcomitans D11S-1] Length = 329 Score = 295 bits (756), Expect = 6e-78, Method: Composition-based stats. Identities = 130/321 (40%), Positives = 197/321 (61%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MK ++ L+ DM+KVN IL ++ SDV +I + Y++ GGKR+RP++ + A L + Sbjct: 9 MKAIQALSHGDMQKVNESILAQLNSDVALINQLGFYIVQGGGKRIRPLIAVLAARALGFD 68 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 69 GQQAITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + +S + L ++ LAEGE++QL + +EE+Y+ VI SKTA LF A + + Sbjct: 129 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMRVIYSKTARLFEVAAQAA 188 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IAG ++ +AL++YG LG AFQLVDDVLDY N +GKN+G+D GKPTLP++ Sbjct: 189 AIIAGADDTQEKALQNYGRYLGTAFQLVDDVLDYSANANALGKNVGDDLAEGKPTLPLLH 248 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G ++ + I G + + IM E+ +L RA QKA D+++C Sbjct: 249 AMHHGNAQQAALIRKAIEQGG-RRDAIDDVLAIMAEHNSLDYAMNRAKQEAQKAVDAIQC 307 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP+S +K +L+ + + R Sbjct: 308 LPESEYKLALISLAYLSVDRT 328 >gi|85705714|ref|ZP_01036811.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. 217] gi|85669704|gb|EAQ24568.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. 217] Length = 333 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 148/322 (45%), Positives = 204/322 (63%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L ME VN LI +R+ S IP V +L+ +GGKRLRPML LATA + Y Sbjct: 12 EQLAAHLATKMEAVNVLIRERMASRHAPRIPQVTAHLVEAGGKRLRPMLVLATADLCGYD 71 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G V LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L ++AF + Sbjct: 72 GPFDVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQL 131 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S L+ LS + T+AEGE+ QLS +++L TE+ YL V++ KTA LFSAA EV Sbjct: 132 MVEPGSLRVLDILSNASATIAEGEVLQLSAAQDLATTEDIYLQVVRGKTAALFSAATEVG 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG +AL YG LGIAFQ+VDD+LDY+G+V GKN+G+DFR K TLPVI Sbjct: 192 GVIAGAPEDHVKALFEYGDALGIAFQIVDDLLDYQGDVKSTGKNVGDDFRERKLTLPVIK 251 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + E+ FWK TI G +L+ A +M+ + AL T A + +A+ ++ Sbjct: 252 AVAAASAEERAFWKRTIEKGDQRDGDLEHALTLMQAHGALEQTRAEALDWAARARAAIAV 311 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD ++ L + + + R++ Sbjct: 312 LPDHPVQRMLDNLAGYVVARIS 333 >gi|17547542|ref|NP_520944.1| octaprenyl-diphosphate synthase [Ralstonia solanacearum GMI1000] gi|17429846|emb|CAD16530.1| probable octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum GMI1000] Length = 322 Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 133/313 (42%), Positives = 194/313 (61%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG +H L Sbjct: 10 VAEDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGQHHYEL 69 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 70 AAVVEFIHTATLLHDDVVDESELRRGRQTANAVFGNAASVLVGDFLYSRAFQMMVQADSM 129 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G Sbjct: 130 RVMQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGAD 189 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ Sbjct: 190 AATEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIYLLSHGTE 249 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G E+ F ++ + AL T A A +++ LP S ++ Sbjct: 250 TQRALARQAIEQG--GTEHFDAIFAAIQASGALEYTRKAAEHEASAAAEAIIALPPSQFR 307 Query: 308 KSLMEVVDFCLQR 320 ++L+E+ F LQR Sbjct: 308 QTLIELCAFSLQR 320 >gi|71906297|ref|YP_283884.1| polyprenyl synthetase [Dechloromonas aromatica RCB] gi|71845918|gb|AAZ45414.1| Polyprenyl synthetase [Dechloromonas aromatica RCB] Length = 341 Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 137/320 (42%), Positives = 201/320 (62%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L DM+ V+ +I R+ SDV ++ V +Y+I SGGKR+RP L L A L+Y+ Sbjct: 22 LEQLYALIGPDMKAVDAVIRDRLYSDVVLVRQVAEYIISSGGKRMRPALVLLAAGALDYQ 81 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H +A +EFIHTATLLHDDVVD+SALRRG+ A ++GN SVLVGDFL S+AF M Sbjct: 82 GTRHQEMAAVVEFIHTATLLHDDVVDESALRRGRDTANAMFGNAASVLVGDFLYSRAFQM 141 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + ++ LS +AEGE+ QL + DV E Y+ VI KTA LF AA ++ Sbjct: 142 MVAVDNMRVMQVLSDATNVIAEGEVLQLMNCHDADVDEARYMQVIHYKTAKLFEAAAQLG 201 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ V +AL +YGM+LG AFQL+DDVLDY G+ + GK+IG+D GKPTLP+I Sbjct: 202 AILGQATPEVEKALTAYGMHLGTAFQLIDDVLDYSGQEADTGKHIGDDLAEGKPTLPLIY 261 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q GT + + I +G ++ + +R + AL + RA + AK +++C Sbjct: 262 VMQHGTPEQAACVRKAIEEG--GRDDFPQVLDAIRNSGALDHAKARAIQEAELAKSAIQC 319 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L DS++KK+L+++ F ++R Sbjct: 320 LGDSNYKKALLQLTLFAVER 339 >gi|313200295|ref|YP_004038953.1| trans-hexaprenyltranstransferase [Methylovorus sp. MP688] gi|312439611|gb|ADQ83717.1| Trans-hexaprenyltranstransferase [Methylovorus sp. MP688] Length = 309 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 129/310 (41%), Positives = 187/310 (60%), Gaps = 2/310 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+ V+ +I K + SDV +I V +Y+I GGKRLRP L L +A H LA + Sbjct: 1 MQAVDAVIRKSLHSDVVLINQVAEYIINGGGKRLRPALVLLSAGAFGEVNARHHELAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+SA+RRG+ A ++GN SVLVGDF+ S+AF M++ +S +E Sbjct: 61 EFIHTATLLHDDVVDESAMRRGRATANTLFGNAASVLVGDFIYSRAFQMMVGVESMRVME 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ +AEGE+ QL + D+T+E YL VI KTA LF AA + ++I Sbjct: 121 VLAEATNIIAEGEVLQLLNVHDADITDEAYLKVIHYKTAKLFEAATRLGAIICSASEQDE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 QA+ YGM LG AFQL+DDVLD+ G+ E+GKN+G+D GKPTLP+++A + GT + Sbjct: 181 QAMAEYGMRLGTAFQLIDDVLDFSGDSQEIGKNLGDDLAEGKPTLPLLIAMRLGTTAQAQ 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I +G + + L + E AL A + D+++ LPDS +++L+ Sbjct: 241 TIRKAIEEGGL--DELPAVMQAVHETGALDQVRAIARQEAKAGCDAIQHLPDSPSRQALL 298 Query: 312 EVVDFCLQRL 321 ++ +F + R Sbjct: 299 KLAEFAVDRT 308 >gi|146278504|ref|YP_001168663.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145556745|gb|ABP71358.1| Polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 333 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 140/312 (44%), Positives = 202/312 (64%), Gaps = 1/312 (0%) Query: 11 DMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM VN LI +R+ S IP+V +L+ +GGKRLRP+LTLA A + Y G H+ LA Sbjct: 21 DMAAVNGLIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S RRGK A L+W N++SVLVGD+L +++F +++ET S Sbjct: 81 TVEFIHTATLLHDDVVDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ L+ + T++EGE+ QL+ +++L TE+ YL V++ KTA LF+AA EV ++AGV + Sbjct: 141 MDILANASATISEGEVLQLTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPEA 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL +YG LGIAFQ+VDD+LDY G ++GKN G+DFR K TLPVI A + E Sbjct: 201 QVAALHAYGDALGIAFQIVDDLLDYGGADAQIGKNTGDDFRERKLTLPVIKAVAKADAEE 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW+ I G +L +A IM + A+ A + A++SL LP+ + Sbjct: 261 RAFWQRVIEKGDQREGDLAQAHAIMARHGAMEAARQDALHWVAVARESLTQLPEHPLRDM 320 Query: 310 LMEVVDFCLQRL 321 L ++ DF ++R+ Sbjct: 321 LHDLADFVVERI 332 >gi|134095950|ref|YP_001101025.1| octaprenyl diphosphate synthase [Herminiimonas arsenicoxydans] gi|133739853|emb|CAL62904.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Herminiimonas arsenicoxydans] Length = 329 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 131/319 (41%), Positives = 194/319 (60%), Gaps = 2/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 +L DM V+ +I +++ S+V ++ + Y+I +GGKR+RP+L L A L YRG Sbjct: 11 NLLIQPIAADMSAVDAVIRQKLHSEVALVNQIADYIISAGGKRIRPVLVLLMANALGYRG 70 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M+ Sbjct: 71 THQYDLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDFLHSRAFQMM 130 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + + A++ L+ +AEGE+ QL + D++EE Y VI+SKTA LF AA ++ + Sbjct: 131 VTVGNIRAMQILADATNVIAEGEVLQLLNMHDPDISEERYTQVIRSKTAKLFEAAAQLGA 190 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 LIAG +A YG +LG AFQL+DDVLDY G ++GKN+G+D R GK TLP+I Sbjct: 191 LIAGASEDEIEAAAEYGRSLGTAFQLIDDVLDYSGHAEDIGKNVGDDLREGKATLPLIYL 250 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G ++ +S I +G E+ + + + AL T+ +A +A S+ L Sbjct: 251 MEHGNTEQRELVRSCIENG--DEEHFDAVLLAVTTSGALDYTKRKAEEAAARAAASIAGL 308 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K +L+ + F + R Sbjct: 309 PESQFKDALLNLSSFAVHR 327 >gi|298369461|ref|ZP_06980778.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str. F0314] gi|298282018|gb|EFI23506.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str. F0314] Length = 324 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 124/322 (38%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D++KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFKQHLHEDLDKVNVVINQAVKSDVALISQIGTYIISAGGKRLRPIITILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRETANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S + LE ++ +AEGE+ QL N D+TE+ Y+ VI+ KTA LF AA +V Sbjct: 125 MVASGSMKILEVMADATNIIAEGEVMQLMNIGNTDITEKQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G + QALK YGM +G AFQ++DDVLDY GE E+GKN+G+D GKPTLP+I Sbjct: 185 AILGGANPAQEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 G+++ + + + S +K + + AL A +KA L Sbjct: 245 LMHNGSEQAAKDVRLALENADRS--YFEKIHDYVVNSNALPYAINEARKAVEKAVACLDI 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ ++ ++ + L R++ Sbjct: 303 LPDNEITLAMRQLAEESLARVS 324 >gi|149202965|ref|ZP_01879936.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. TM1035] gi|149143511|gb|EDM31547.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. TM1035] Length = 333 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 147/322 (45%), Positives = 202/322 (62%), Gaps = 1/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L ME VN LI +R+ S IP V +L+ +GGKRLRPML LATA + Y Sbjct: 12 EQLAAHLAAKMEAVNLLIRERMASRHAPRIPQVTAHLVEAGGKRLRPMLVLATADLCGYD 71 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G V LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N++SVLVGD+L ++AF + Sbjct: 72 GPFDVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQL 131 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S L+ LS + T+AEGE+ QLS +++L TE+ YL V++ KTA LFSAA EV Sbjct: 132 MVEPGSLRVLDILSNASATIAEGEVLQLSAAQDLATTEDIYLQVVRGKTAALFSAATEVG 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + +AL YG LGIAFQ+VDD+LDY+G+ GKN+G+DFR K TLPVI Sbjct: 192 GVIAGAPETQIKALFEYGDALGIAFQIVDDLLDYQGDAKSTGKNVGDDFRERKLTLPVIK 251 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A E+ FWK TI G +L+ A +M+ + AL T A + +A+ ++ Sbjct: 252 AVSAANAEERAFWKRTIEKGDQRDGDLEHALALMQAHGALEQTRAEALDWAARARAAIAV 311 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD + L + + + R++ Sbjct: 312 LPDHPVRGMLDRLAGYVVARIS 333 >gi|90408282|ref|ZP_01216447.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3] gi|90310583|gb|EAS38703.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3] Length = 325 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 125/320 (39%), Positives = 192/320 (60%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ ++ +M KVN LI K++ SDV +I + Y++ SGGKR+RP++T+ A L Sbjct: 5 IKHIQQISNTEMAKVNALISKQLTSDVALIKQLGFYIVNSGGKRIRPLITILAAKALNVH 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA IEF+HTATLLHDDVVD+S LRRGK A ++GN SVLVGDFL +++F M Sbjct: 65 SEKITKLAAIIEFVHTATLLHDDVVDESDLRRGKKTANALFGNAASVLVGDFLYTRSFQM 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E ++ + ++ LS +AEGE+ QL + +++E+ Y+ +I KTA LF AA ++ Sbjct: 125 MSELQNLKVMDVLSRATNIIAEGEVLQLMNCNDANISEKLYMDIIYYKTAKLFEAATQLV 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++A + AL +YG LG AFQL DDV+DY EMGKN G+D GKPTLP+I Sbjct: 185 GVLAEQTPEIELALLNYGKYLGTAFQLTDDVMDYTSNAQEMGKNSGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT+++K K I +++ + AL + RA KA +++ Sbjct: 245 AMKNGTEKQKALIKDAIEKAN-GMQHFDLIMETLASTNALEYAQARAQEEADKAIEAIAI 303 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ +K++L+ + R Sbjct: 304 LPNNQYKEALVSLAHLAANR 323 >gi|299065629|emb|CBJ36801.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CMR15] Length = 322 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 132/313 (42%), Positives = 193/313 (61%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG +H L Sbjct: 10 VAEDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGQHHYEL 69 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M+++ S Sbjct: 70 AAVVEFIHTATLLHDDVVDESELRRGRQTANAAFGNAASVLVGDFLYSRAFQMMVQADSM 129 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G Sbjct: 130 RVMQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGAD 189 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ Sbjct: 190 AATEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIYLLSHGTE 249 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G E+ F ++ + AL T A A +++ LP S ++ Sbjct: 250 TQRALARQAIEQG--GTEHFDAIFAAIQASGALEYTRKAAEREASAAAEAIIALPPSQFR 307 Query: 308 KSLMEVVDFCLQR 320 ++L+E+ F LQR Sbjct: 308 QTLIELCAFSLQR 320 >gi|222054630|ref|YP_002536992.1| Polyprenyl synthetase [Geobacter sp. FRC-32] gi|221563919|gb|ACM19891.1| Polyprenyl synthetase [Geobacter sp. FRC-32] Length = 322 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 126/321 (39%), Positives = 192/321 (59%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ L +D+ V K + SDV +I V +Y++ SGGKR+RP L L +A + Y Sbjct: 1 MEAALALIGEDLTNVELQFKKDLHSDVPLIRKVGEYVLASGGKRIRPALLLLSAKLCGYT 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ +V LA IEFIHTATLLHDDVVD++ LRRG +A +WGN+ SVLVGDFL S++F + Sbjct: 61 GNRNVALASVIEFIHTATLLHDDVVDNANLRRGIASANTLWGNEASVLVGDFLFSKSFSL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + L+ LS +AEGE+ QL + +LD+T E Y+ V+K+KTA+L SAA + Sbjct: 121 MVADGDLKILKVLSGATTIIAEGEVLQLICTSDLDLTLERYIEVVKAKTAILLSAACQSG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + AL+ +GM+LGIAFQL+DD LDY + GK+IG D GK TLP+I Sbjct: 181 AILGQASSQHETALQEFGMDLGIAFQLMDDTLDYVASEEQFGKSIGHDLEEGKITLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++ T E++ + I + ++ F ++ + + T A Y + K L Sbjct: 241 TLRQCTAEERSQIGTIIEKDILEDQDFSTVFDLVGKYDGIKHTIAVANEYVNRCKGHLNV 300 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 P+S+ K +L ++ D+ L R+ Sbjct: 301 FPESTEKAALFDLADYVLTRV 321 >gi|92112606|ref|YP_572534.1| trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM 3043] gi|91795696|gb|ABE57835.1| Trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM 3043] Length = 337 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 134/304 (44%), Positives = 186/304 (61%), Gaps = 2/304 (0%) Query: 17 FLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHT 76 IL ++ S V ++ + +Y+I SGGKRLRP+L L A L Y GD HV LA IEF+HT Sbjct: 34 RTILAQLASRVPLVETIGRYIIESGGKRLRPLLVLLAARSLNYPGDRHVTLATLIEFMHT 93 Query: 77 ATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136 +TLLHDDVVD+S LRRGK A WGN SVLVGDFL S++F M++E S +E LS Sbjct: 94 STLLHDDVVDESHLRRGKATANDAWGNAPSVLVGDFLYSRSFQMMVEVGSMRVMEILSGA 153 Query: 137 ACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKS 196 C +AEGE+ QL+ N D+ E Y I+ KTA+LF AA +++A + +ALK Sbjct: 154 TCVIAEGEVLQLTNIGNPDIDEAAYFDTIQGKTAMLFEAASHSGAVLAEATPAQEEALKL 213 Query: 197 YGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKST 256 YG LG+AFQLVDD+LDY+G+ + MGKN+G+D GKPTLP+I A G + + + Sbjct: 214 YGRYLGLAFQLVDDLLDYQGDADAMGKNVGDDLAEGKPTLPLIHAMANGNAEQVSVVRQA 273 Query: 257 INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDF 316 I G + ++L + I+ + AL T RA +A L LP+S ++ S+ + Sbjct: 274 IRQGGL--DHLDEVLAIVHDTGALDYTRRRAEEMADRALAQLELLPESRYRDSMAALAHL 331 Query: 317 CLQR 320 ++R Sbjct: 332 AVER 335 >gi|293390542|ref|ZP_06634876.1| heptaprenyl diphosphate synthase component II [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951076|gb|EFE01195.1| heptaprenyl diphosphate synthase component II [Aggregatibacter actinomycetemcomitans D7S-1] Length = 329 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 128/321 (39%), Positives = 198/321 (61%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ L+ +DM+K+N IL ++ SDV +I + Y++ GGKR+RP++ + A L + Sbjct: 9 VKAIQALSHEDMQKINESILAQLNSDVALINQLGFYIVQGGGKRIRPLIAVLAARALGFD 68 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + A +EFIHTA+LLHDDVVD+S +RRG+ A +GN SVLVGDF+ ++AF + Sbjct: 69 GQQAITCATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 V + +S + L ++ LAEGE++QL + +EE+Y+ VI SKTA LF A + + Sbjct: 129 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMRVIYSKTARLFEVAAQAA 188 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++IAG ++ +AL++YG LG AFQLVDDVLDY N +GKN+G+D GKPTLP++ Sbjct: 189 AIIAGADDTQEKALQNYGRYLGTAFQLVDDVLDYSANANALGKNVGDDLAEGKPTLPLLH 248 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A G ++ + I G + + IM E+ +L RA QKA D+++C Sbjct: 249 AMHHGNAQQAALIRKAIEQGG-RRDAIDDVLAIMAEHNSLDYAMNRAKQEAQKAVDAIQC 307 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP+S +K +L+ + + R Sbjct: 308 LPESEYKLALISLAYLSVDRT 328 >gi|227328594|ref|ZP_03832618.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 296 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 129/295 (43%), Positives = 180/295 (61%), Gaps = 1/295 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT +DM VN +IL+++ SDV +I + Y+I GGKR+RPM+ + A L+Y Sbjct: 3 LEQITALTTQDMAAVNNVILEQLNSDVVLINQLGHYIISGGGKRIRPMIAVLAARALDYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD HV +A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGDF+ ++AF M Sbjct: 63 GDKHVTVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + +S L +S +AEGE+ QL + D+TEE Y+ VI SKTA LF AA + S Sbjct: 123 MTSLESLRVLALMSEAVNVIAEGEVLQLMNCNDPDITEESYMRVIYSKTARLFEAAAQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++AG +AL+ YG LG AFQL+DD+LDY + +GKN G+D GKPTLP++ Sbjct: 183 SILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLGKNTGDDLNEGKPTLPLLH 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 A + G + + + I +G L+ M++ +L T RA KA Sbjct: 243 AMRNGNAEQSSLIRKAIEEGN-GRHLLEPVLAAMQQCGSLDYTRQRAEEEADKAI 296 >gi|325267223|ref|ZP_08133886.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394] gi|324981284|gb|EGC16933.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394] Length = 324 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 125/320 (39%), Positives = 196/320 (61%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + D+ +VN +I + + SDV +I + Y+I SGGKRLRP+LT+ + L Y Sbjct: 5 IPYFQQNLEADLSRVNVVINRAVQSDVALISQIGTYIIGSGGKRLRPILTILSGKCLGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DDKLYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S + LE ++ +AEGE+ QL N+D+TE+ YL VI+ KTA LF AA +V Sbjct: 125 MVGSGSLKILEVMADATNIIAEGEVMQLMNIGNVDITEQQYLQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + +ALK +GM +G AFQ+VDDVLDY G V ++GKN+G+D GKPTLP+I Sbjct: 185 AILAGADDEQERALKEFGMYMGTAFQIVDDVLDYSGSVEQIGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q+G++ + ++ + + + K + E+ L +A +A L+ Sbjct: 245 LMQQGSQAARQDVRTALQNADRA--YFDKIHQYVTESDVLEYCMTQAKEAVNQAIHCLKR 302 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ +++ ++ + + R Sbjct: 303 LPDNEVTQAMRQMAELSVVR 322 >gi|293398312|ref|ZP_06642503.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62] gi|291611236|gb|EFF40320.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62] Length = 324 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 124/322 (38%), Positives = 191/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENA--DRGYFEKIRDYVVRSDALAYSIGEARKAVDCAVAALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L DS K +++++ L R++ Sbjct: 303 LSDSEVKDAMIQLAKESLVRVS 324 >gi|194290791|ref|YP_002006698.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424] gi|193224626|emb|CAQ70637.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424] Length = 345 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 134/313 (42%), Positives = 191/313 (61%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L TA L Y G+ H L Sbjct: 33 VAADMRAVDAVIRQRLSSEVPLIEQIGEYIIGAGGKRLRPVILLLTARALGYDGNRHHEL 92 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 93 AAVVEFIHTATLLHDDVVDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMVDAGSM 152 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS +AEGE+ QL + DVT E YL VI+ KTA LF AA ++ ++++G Sbjct: 153 RIMEILSNATNVIAEGEVLQLLNMHDPDVTVERYLQVIRYKTAKLFEAAAQLGAVLSGAD 212 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++ + GT Sbjct: 213 AQMEEAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLMEHGTA 272 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G E+ F + + AL T A + A+ + R P S+ K Sbjct: 273 EQRQLARDAIVQG--GTEHFDAVFAAIHASGALEVTFEAARREAEAAEQAARQFPPSALK 330 Query: 308 KSLMEVVDFCLQR 320 ++L+++ F LQR Sbjct: 331 ETLIQLCAFSLQR 343 >gi|59802000|ref|YP_208712.1| IspB [Neisseria gonorrhoeae FA 1090] gi|194099557|ref|YP_002002687.1| IspB [Neisseria gonorrhoeae NCCP11945] gi|239999762|ref|ZP_04719686.1| IspB [Neisseria gonorrhoeae 35/02] gi|240014919|ref|ZP_04721832.1| IspB [Neisseria gonorrhoeae DGI18] gi|240081510|ref|ZP_04726053.1| IspB [Neisseria gonorrhoeae FA19] gi|240113789|ref|ZP_04728279.1| IspB [Neisseria gonorrhoeae MS11] gi|240116523|ref|ZP_04730585.1| IspB [Neisseria gonorrhoeae PID18] gi|240118747|ref|ZP_04732809.1| IspB [Neisseria gonorrhoeae PID1] gi|240121989|ref|ZP_04734951.1| IspB [Neisseria gonorrhoeae PID24-1] gi|240124286|ref|ZP_04737242.1| IspB [Neisseria gonorrhoeae PID332] gi|240126497|ref|ZP_04739383.1| IspB [Neisseria gonorrhoeae SK-92-679] gi|240128960|ref|ZP_04741621.1| IspB [Neisseria gonorrhoeae SK-93-1035] gi|254494548|ref|ZP_05107719.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291] gi|260439720|ref|ZP_05793536.1| IspB [Neisseria gonorrhoeae DGI2] gi|268595575|ref|ZP_06129742.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02] gi|268597610|ref|ZP_06131777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19] gi|268599861|ref|ZP_06134028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11] gi|268602196|ref|ZP_06136363.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18] gi|268604462|ref|ZP_06138629.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1] gi|268682915|ref|ZP_06149777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332] gi|268685081|ref|ZP_06151943.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679] gi|268687344|ref|ZP_06154206.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035] gi|291042968|ref|ZP_06568706.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2] gi|59718895|gb|AAW90300.1| putative octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA 1090] gi|193934847|gb|ACF30671.1| IspB [Neisseria gonorrhoeae NCCP11945] gi|226513588|gb|EEH62933.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291] gi|268548964|gb|EEZ44382.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02] gi|268551398|gb|EEZ46417.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19] gi|268583992|gb|EEZ48668.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11] gi|268586327|gb|EEZ51003.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18] gi|268588593|gb|EEZ53269.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1] gi|268623199|gb|EEZ55599.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332] gi|268625365|gb|EEZ57765.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679] gi|268627628|gb|EEZ60028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035] gi|291013107|gb|EFE05076.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2] gi|317165053|gb|ADV08594.1| IspB [Neisseria gonorrhoeae TCDC-NG08107] Length = 324 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 124/322 (38%), Positives = 191/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIRVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G+++ N ++ + + +K + + AL + A A +L Sbjct: 245 LMRQGSEQVANDVRTALENA--DRGYFEKIRDYVVRSDALAYSIGEARKAVDCAVAALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L DS K +++++ L R++ Sbjct: 303 LSDSEVKDAMIQLAKESLVRVS 324 >gi|330813965|ref|YP_004358204.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487060|gb|AEA81465.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 338 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 125/319 (39%), Positives = 193/319 (60%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L ++E+V+ I +++ S VE+I ++ YLI SGGKRLRP+LT+A++ + Y+GD Sbjct: 20 LRSAYQSEIEEVDSFIKEKLSSHVELIGEMSSYLIQSGGKRLRPLLTIASSELFGYQGDR 79 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA +E IH ATLLHDDV+D S RRGK +WGN+ S+L GD+LL + F +++E Sbjct: 80 HIKLAACVELIHNATLLHDDVIDKSDFRRGKKTNNNLWGNKNSILTGDYLLGRCFEIMVE 139 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S E L+ LS V+ +A+GE+ QL K ++ E+ YL +I SKT+ LF+A++ V I Sbjct: 140 DGSLEVLKLLSSVSSEIAQGEILQLQHEKEVETLEKTYLEIIGSKTSSLFAASMRVGGCI 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + ++AL S+G NLGI FQ+ DD+LDY + GK IG DF GK TLP+I+ +Q Sbjct: 200 NDKSKNEKEALTSFGFNLGICFQITDDILDYYSDKIAFGKVIGNDFYEGKVTLPIIMLYQ 259 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + ++ E+ K + + E L +M + + + + RA + + DSL P+ Sbjct: 260 KSSESERLALKEMFVRKERTKEELAYTLNLMTKYQVIASCKKRAEHFSSVSADSLGIFPE 319 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S K L E+ + + R+N Sbjct: 320 SKEKTRLQELAFYIVNRIN 338 >gi|20094211|ref|NP_614058.1| geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19] gi|19887236|gb|AAM01988.1| Geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19] Length = 324 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 108/322 (33%), Positives = 178/322 (55%), Gaps = 5/322 (1%) Query: 4 LEDLTLKDMEKVNFLILKRI-----CSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 + LK++ + L+ +I E + D +LI +GGKR+RP+L + + LML Sbjct: 1 MRSEILKELNRARELVDAKIEEVLPRGGPEDLYDACWHLIEAGGKRIRPLLAIKSCLMLG 60 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 ++ + A A+E IHT TL+HDD++D+ RRG A + WG ++L GD L S+AF Sbjct: 61 GSEEDVLPEAVAVELIHTFTLIHDDIMDEDDERRGVPAVHVKWGVPVAILAGDTLFSKAF 120 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 + E EA++ L+ + EG+ + +VTE+++L +I+ KTA L + Sbjct: 121 EVAAEGGDVEAVKELARACTEICEGQAMDIGFENRTEVTEDEFLEMIRKKTAALIRTSCV 180 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 V L AG +AL+ YG NLGIAFQ+ DDVLD G+ +E+GK +G D GK TL V Sbjct: 181 VGGLKAGANREQLEALREYGENLGIAFQIQDDVLDLVGDESELGKPVGSDIVEGKKTLIV 240 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 I + + ++ S + + S E++++ I+ + A+ + RA Y +AK +L Sbjct: 241 IKGLELADEEQRERILSVLGNEDASREDVREVIQILEDLGAIDYAKKRAREYADRAKAAL 300 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 R LP++ ++ L ++ DF ++R Sbjct: 301 RELPENEHREFLEKLADFVVER 322 >gi|255264686|ref|ZP_05344028.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62] gi|255107021|gb|EET49695.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62] Length = 332 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 139/321 (43%), Positives = 209/321 (65%), Gaps = 2/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L D+E VN +I R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y Sbjct: 12 ERLNAALTTDLEAVNEVIAARMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAAQLCGYD 71 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GDNH+ LA +EFIHTATLLHDDVVD+SA RRG+ A L+W NQ+SVLVGD+L +++F + Sbjct: 72 GDNHIKLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNQSSVLVGDYLFARSFQL 131 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++T S L+ L+ A T+AEGE+ Q++ +++L TE+ YL +++ KTA LFSAA +V Sbjct: 132 MVKTGSLRVLDILANAAATIAEGEVLQMTAAQDLGTTEDTYLKIVRGKTAALFSAATQVG 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +I+ ++ +AL YG LGIAFQ+VDD+LDY G + GKNIG+DFR K TLPVI Sbjct: 192 GVISDADETIVKALYDYGDALGIAFQIVDDLLDY-GGSDATGKNIGDDFRERKLTLPVIK 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A E+ FW+ I GK +L+ A ++ ++ ++ A + + AK ++ Sbjct: 251 AVAAADTEERAFWERVIEKGKQDEGDLEHALTLLAKHGSMQAARVDALEWIEVAKSAMAN 310 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP + ++ L+++ D+ + R+ Sbjct: 311 LPQAPLREMLIDLADYVVARV 331 >gi|113869207|ref|YP_727696.1| trans-hexaprenyltranstransferase [Ralstonia eutropha H16] gi|113527983|emb|CAJ94328.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha H16] Length = 328 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 134/313 (42%), Positives = 190/313 (60%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L TA + Y G+ H L Sbjct: 16 VAADMRAVDAVIRQRLSSEVPLIEQIGEYIIGAGGKRLRPVILLLTARAMGYDGNRHHEL 75 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 76 AAVVEFIHTATLLHDDVVDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMVDAGSM 135 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS +AEGE+ QL + DVT E YL VI+ KTA LF AA ++ +++AG Sbjct: 136 RIMEILSNATNVIAEGEVLQLLNMHDPDVTVERYLQVIRYKTAKLFEAAAQLGAVLAGAD 195 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++ + GT Sbjct: 196 AQMEEAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLLEHGTP 255 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G E+ F + + AL T A + A+ + R P S K Sbjct: 256 EQRQLARDAIVRG--GTEHFDAVFAAIHASGALDVTFEAARREAEAAEQAARQFPPSELK 313 Query: 308 KSLMEVVDFCLQR 320 ++L+++ F LQR Sbjct: 314 ETLIQLCAFSLQR 326 >gi|307294472|ref|ZP_07574314.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1] gi|306878946|gb|EFN10164.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1] Length = 346 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 214/314 (68%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L + M +VN +IL R+ S + +IP++ +LI GGKR+RPMLTLA A ++ Y G H Sbjct: 31 LVAEGMNQVNAVILDRMQSRIPLIPELAGHLIAGGGKRMRPMLTLACADLVGYAGSRHYK 90 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S++F +++E +S Sbjct: 91 LAAAVEFIHTATLLHDDVVDGSGLRRGRKTANIIWGNSASVLVGDFLFSRSFELMVEAES 150 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ LS + +AEGE+ QL+ + +D +EE YL +I +KTA LF+AA +S+++A Sbjct: 151 LKVLKILSNASAVIAEGEVNQLTAQRKIDTSEEQYLDIIGAKTAALFAAACRISAVVADR 210 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QAL YG NLGIAFQL+DD +DY + MGK+ G+DFR+GK TLPVILA+ RG+ Sbjct: 211 DEAEEQALDVYGRNLGIAFQLIDDAIDYESDGATMGKDAGDDFRDGKVTLPVILAYARGS 270 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FWK+ I ++S E+L A ++R+ A+ DT RA YGQ+A D+L + Sbjct: 271 DEERTFWKAAIAGNRVSDEDLAHATGLLRKTGAIADTLARARHYGQRAIDALGMFDNGKA 330 Query: 307 KKSLMEVVDFCLQR 320 K +L E V+F + R Sbjct: 331 KAALTEAVEFAIAR 344 >gi|83945354|ref|ZP_00957702.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii HTCC2633] gi|83851188|gb|EAP89045.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii HTCC2633] Length = 351 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 144/317 (45%), Positives = 211/317 (66%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L L DM V +I +R+ S IP YL+ +GGKR+RP++T+ A ML Y GD Sbjct: 33 LATLASDDMAAVEAVIEERMASATRSIPQTADYLVAAGGKRIRPLITVTAARMLGYEGDG 92 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 HV LA A+E+IH+ATLLHDDVVD+S LRRGK A VWGN SVLVGDFL +++F M+++ Sbjct: 93 HVSLAAAVEYIHSATLLHDDVVDESELRRGKAPANTVWGNAHSVLVGDFLFARSFMMMVD 152 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S +AL LS A +AEGE+RQL+ +N+D++ ++Y+ +I +KTA LFSAA +V+ ++ Sbjct: 153 AGSMDALHVLSRAASVIAEGEVRQLAAVRNIDISRDEYMSIIDAKTAALFSAAAQVAPIL 212 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G ++ L++YG LG+AFQLVDD LDY G E+GKN G+DFR GK TLPV LA + Sbjct: 213 YGSDKAIEDGLETYGRELGLAFQLVDDALDYGGMAAELGKNTGDDFREGKITLPVALAME 272 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + RE+ FWK I+DG+ + + +A I++++ AL T A ++ A ++L+ P Sbjct: 273 NASARERAFWKRVISDGEQTDADFDEALAILKKHGALDATLEAARTHAANAVNALKIAPQ 332 Query: 304 SSWKKSLMEVVDFCLQR 320 + W ++L + +F ++R Sbjct: 333 NEWTEALAALPEFVVER 349 >gi|270158512|ref|ZP_06187169.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968] gi|289166652|ref|YP_003456790.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] gi|269990537|gb|EEZ96791.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968] gi|288859825|emb|CBJ13806.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] Length = 322 Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats. Identities = 122/319 (38%), Positives = 202/319 (63%), Gaps = 2/319 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L +L +D E VN LI++ I S +++I D+ ++I SGGKRLR +L L + Y G Sbjct: 6 LRNLVSEDFEAVNHLIIETIKSPIQLIDDIANHVIQSGGKRLRCLLVLLASRACGYEGKE 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H++LA IEF HTATLLHDDV+DDS LRRG+ A +WGN+ S+LVGD+L ++ +++E Sbjct: 66 HIMLAAMIEFFHTATLLHDDVIDDSTLRRGRDTANKIWGNKASILVGDYLFTKYLELMVE 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + ++ L +A + GE++Q S N D++ E+Y +I++KTA+LF+A+ + +LI Sbjct: 126 VGDIDIIQLLIGIAPQMGCGEIQQFSNRHNADLSVEEYFDMIRAKTALLFAASSAIGALI 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + ++ +++A+ SYG++LG AFQL+DD LDY + +GKNIG+D GK TLP++ A + Sbjct: 186 SKSEHQIQKAMYSYGLHLGNAFQLIDDALDYCSDAQTIGKNIGDDLATGKITLPLLQALK 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 GT ++ + ++ G ++ +L + E +A+ T A A D+L LPD Sbjct: 246 HGTAEQQIKIRESLEKG--TLLHLPAILAAITETKAIEYTRDIADKEADFAIDALSILPD 303 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S++K++L+++ + R + Sbjct: 304 STYKQALVDLARYAAHRKH 322 >gi|262371901|ref|ZP_06065180.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii SH205] gi|262311926|gb|EEY93011.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii SH205] Length = 325 Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats. Identities = 117/315 (37%), Positives = 183/315 (58%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVL 66 D +++LI + I S V ++ V K+++ +GGKR+RP++ L A Sbjct: 13 VATDFAAMDYLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAAKACGLVNMQQAQH 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL++++F ++++ + Sbjct: 73 LAAIIEMLHTATLVHDDVVDESNLRRGRPTANATWNNQTAVLVGDFLIARSFDLLVDLNN 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL + TEE YL +I KT+ LF A E ++++AG Sbjct: 133 ITLLKDFSTGTCEIAEGEVLQLQSQHQPETTEETYLRIIHGKTSRLFELATEGAAILAG- 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T Sbjct: 192 TEEYREPLRRFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHST 251 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E + +I G +E+L K I+ + A+ + RA A ++L+ LPD+ + Sbjct: 252 GEEHEIIRRSIATG--GIEHLDKVIQIVHNSGAIEYCQKRAQQETDGALEALKALPDNEY 309 Query: 307 KKSLMEVVDFCLQRL 321 +++L+ + L RL Sbjct: 310 RQALINLTLMALHRL 324 >gi|212213122|ref|YP_002304058.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212] gi|212011532|gb|ACJ18913.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212] Length = 332 Score = 291 bits (746), Expect = 9e-77, Method: Composition-based stats. Identities = 124/321 (38%), Positives = 192/321 (59%), Gaps = 3/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L D+E V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y Sbjct: 12 IESLRQLVQNDIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYE 71 Query: 61 GD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 D H LA IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF Sbjct: 72 QDVEHQELATVIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQ 131 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+ Sbjct: 132 ILARRSNVPIMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEI 191 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++A + ++++ ++G++LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I Sbjct: 192 GAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLI 251 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + I +G + ++L+ +M E RA T+ A +KA L+ Sbjct: 252 YAKQQAQPAQAEHIREAIKNGDL--DDLQSIMKLMDETRAREYTQQCALKQAEKAHTYLQ 309 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + F + R Sbjct: 310 QLPPSPYRDALNALTQFVVSR 330 >gi|294012754|ref|YP_003546214.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S] gi|292676084|dbj|BAI97602.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S] Length = 346 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 151/314 (48%), Positives = 214/314 (68%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L + M +VN +IL R+ S + +IP++ +LI GGKR+RPMLTLA A ++ Y G H Sbjct: 31 LVAEGMNQVNAVILDRMQSRIPLIPELAGHLIAGGGKRMRPMLTLACADLVGYAGSRHYK 90 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S LRRG+ A ++WGN SVLVGDFL S++F +++E +S Sbjct: 91 LAAAVEFIHTATLLHDDVVDGSGLRRGRKTANIIWGNSASVLVGDFLFSRSFELMVEAES 150 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L+ LS + +AEGE+ QL+ + +D +EE YL +I +KTA LF+AA +S+++A Sbjct: 151 LKVLKILSNASAVIAEGEVNQLTAQRKIDTSEEQYLDIIGAKTAALFAAACRISAVVADR 210 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QAL YG NLGIAFQL+DD +DY + MGK+ G+DFR+GK TLPVILA+ RG+ Sbjct: 211 DEAEEQALDVYGRNLGIAFQLIDDAIDYESDGATMGKDAGDDFRDGKVTLPVILAYARGS 270 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FWK+ I ++S E+L A ++R+ A+ DT RA YGQ+A D+L + Sbjct: 271 DEERAFWKAAIAGNRVSDEDLAHATGLLRKTGAIADTLARARHYGQRAIDALGMFDNGKA 330 Query: 307 KKSLMEVVDFCLQR 320 + +L E V+F + R Sbjct: 331 RAALTEAVEFAIAR 344 >gi|295688727|ref|YP_003592420.1| trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756] gi|295430630|gb|ADG09802.1| Trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756] Length = 341 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 153/323 (47%), Positives = 211/323 (65%), Gaps = 5/323 (1%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-----E 58 L L DM VN LI +R+ SDV +IP + ++LI +GGKRLRP+LT+A A + Sbjct: 18 LVRLAETDMAGVNRLITERMQSDVPIIPALAEHLIAAGGKRLRPLLTVAAARLAASDGAG 77 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 D+ + LA A+EFIHTATLLHDDVVD SALRRGKVAA L+WG SVLVGDFL ++AF Sbjct: 78 SDNDHCLKLAAAVEFIHTATLLHDDVVDGSALRRGKVAAHLIWGGAQSVLVGDFLFARAF 137 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +++ET S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E Sbjct: 138 ELMVETNSMKALEILARASRVIAEGEVMQLMRSHDLNLSQALYLEIIQAKTAELFAAASE 197 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 ++ AGV + ALK+YG+NLG+AFQLVDD LDY G +GKN G+DFR GK TLP+ Sbjct: 198 AGAVSAGVDQTRADALKAYGLNLGLAFQLVDDALDYGGATETLGKNAGDDFREGKATLPL 257 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 +LA R RE FW+ + + + + ++A ++ AL T A Y KAK +L Sbjct: 258 LLAIARSGPREAEFWERAVGRREQTEADFRRARELIIGTGALDATLDLATDYADKAKAAL 317 Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321 P + W++SL + DF + R Sbjct: 318 AIFPANDWRESLESLADFAVSRT 340 >gi|187476774|ref|YP_784798.1| octaprenyl-diphosphate synthase [Bordetella avium 197N] gi|115421360|emb|CAJ47865.1| octaprenyl-diphosphate synthase [Bordetella avium 197N] Length = 321 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 134/320 (41%), Positives = 195/320 (60%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L DM+ V+ +I +R+ S+V +I + Y+I +GGKR+RP + L A L Y Sbjct: 3 LPALIAPITDDMKAVDAVIRERLNSEVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LLA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M Sbjct: 63 GTHHQLLAAVVEFIHTATLLHDDVVDESDLRRGRETANAVFGNAASVLVGDYLYSRSFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S ++ LS +AEGE+ QL + +V++E YL V++ KTA LF AA +V Sbjct: 123 MVEANSMRIMQILSEATTVIAEGEVLQLLNVHDPEVSQERYLQVVRYKTAKLFEAAAQVG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG A +YG ++G AFQL+DDVLDY G+ +GKN+G+D R GKPTLP+I Sbjct: 183 AVLAGATPEQEAAAAAYGRHIGTAFQLIDDVLDYSGDALALGKNVGDDLREGKPTLPLIR 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G+ ++ + I G+ +R+ AL A QKA+D+L C Sbjct: 243 VMEVGSPEQQALIRQAIETGQADF---AAVAAAIRDTDALAHARRAAEVEAQKARDALSC 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S ++KSL+E F ++R Sbjct: 300 YPASIFQKSLLEFCAFAVER 319 >gi|169632597|ref|YP_001706333.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter baumannii SDF] gi|169794921|ref|YP_001712714.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter baumannii AYE] gi|184159304|ref|YP_001847643.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii ACICU] gi|213157674|ref|YP_002320472.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057] gi|215482467|ref|YP_002324653.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294] gi|239502311|ref|ZP_04661621.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB900] gi|260557286|ref|ZP_05829502.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606] gi|301344906|ref|ZP_07225647.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB056] gi|301511077|ref|ZP_07236314.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB058] gi|301595152|ref|ZP_07240160.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB059] gi|332854208|ref|ZP_08435228.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6013150] gi|332866350|ref|ZP_08436955.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6013113] gi|332872565|ref|ZP_08440534.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6014059] gi|169147848|emb|CAM85711.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter baumannii AYE] gi|169151389|emb|CAP00114.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter baumannii] gi|183210898|gb|ACC58296.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii ACICU] gi|213056834|gb|ACJ41736.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057] gi|213986828|gb|ACJ57127.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294] gi|260409392|gb|EEX02694.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606] gi|322509215|gb|ADX04669.1| ispB [Acinetobacter baumannii 1656-2] gi|323519244|gb|ADX93625.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii TCDC-AB0715] gi|332728133|gb|EGJ59521.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6013150] gi|332734698|gb|EGJ65802.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6013113] gi|332739251|gb|EGJ70109.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6014059] Length = 325 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 121/315 (38%), Positives = 185/315 (58%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A N Sbjct: 13 VATDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDNMQNAQR 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 73 LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNN 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E ++++AG Sbjct: 133 MTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAG- 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 Q + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T Sbjct: 192 QEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHST 251 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E + +I G V+ L K I++++ AL + RA + A +L LPD+ + Sbjct: 252 GEEHAIIRRSIATG--GVDQLPKVIEIVQKSGALDYCQRRAQEETEAALQALSILPDTPY 309 Query: 307 KKSLMEVVDFCLQRL 321 +++L+ + L R+ Sbjct: 310 RQALINLTRLALHRI 324 >gi|241664241|ref|YP_002982601.1| polyprenyl synthetase [Ralstonia pickettii 12D] gi|240866268|gb|ACS63929.1| Polyprenyl synthetase [Ralstonia pickettii 12D] Length = 325 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 129/313 (41%), Positives = 195/313 (62%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L Y+G++ L Sbjct: 13 VAEDMRAVDAVIRRRLGSEVVLINQIGEYIISAGGKRLRPVILLLVANALGYKGEHQHEL 72 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 73 AAVVEFIHTATLLHDDVVDESDLRRGRKTANAVFGNAASVLVGDFLYSRAFQMMVQANSM 132 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G Sbjct: 133 RIMQILADATNIISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGAG 192 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ +A YG +G AFQ++DD+LDY ++MGKN G+D R GKPTLP+I GT+ Sbjct: 193 AAIEEAAAEYGRRIGTAFQIIDDLLDYTSTADQMGKNAGDDLREGKPTLPLIHLLSNGTE 252 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G E+ F ++ + AL T A A+ + LP S ++ Sbjct: 253 EQRALVRQAIEQG--GTEHFDAIFAAIQASGALEYTRQAAEREAAAAEAAANALPPSLFR 310 Query: 308 KSLMEVVDFCLQR 320 ++L+++ F LQR Sbjct: 311 QTLIDLCAFSLQR 323 >gi|262376679|ref|ZP_06069907.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145] gi|262308389|gb|EEY89524.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145] Length = 325 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 119/315 (37%), Positives = 188/315 (59%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66 D ++ I + I S V ++ V K+++ +GGKR+RP++ L A + H Sbjct: 13 VANDFAAMDTFINEGITSKVALVMAVSKHVVEAGGKRMRPIMCLLAAKACGAENLEPHRK 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+S+AF ++++ + Sbjct: 73 LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLISRAFDLLVDLNN 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL + TE YL++I KT+ LF A E +++++ Sbjct: 133 MVLLKDFSTGTCEIAEGEVLQLQSQHQPETTEATYLNIIHGKTSRLFELATEGAAILSD- 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ RQ LK++ + G AFQ++DD+LDY + + +GKNIG+D GKPTLP+I A + T Sbjct: 192 KDEFRQPLKTFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPTLPLIAALKNTT 251 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + +I G E+L++ I+ E+ AL RA + A D+L+ LPDS + Sbjct: 252 GEQHEIIRRSIATG--GTEHLEQVIQIVNESGALDYCRQRATEETEIAIDALQALPDSEY 309 Query: 307 KKSLMEVVDFCLQRL 321 +++L+ + L R+ Sbjct: 310 RQALINLAKLALHRI 324 >gi|240017367|ref|ZP_04723907.1| IspB [Neisseria gonorrhoeae FA6140] Length = 324 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 124/322 (38%), Positives = 190/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ KVN +I + + SDV +I + Y+I +GGKRLRP++T+ + Y Sbjct: 5 LPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISAGGKRLRPIMTILAGKAVGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S LE ++ +AEGE+ QL N D+TEE Y+ VI+ KTA LF AA +V Sbjct: 125 MVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITEEQYIRVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ QALK YGM +G AFQ++DDVLDY GE E GKN+G+D GKPTLP+I Sbjct: 185 AILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETEETGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++G ++ N ++ + + +K + + AL + A A +L Sbjct: 245 LMRQGFEQVANDVRTALENA--DRGYFEKIRDYVVRSDALAYSIGEARKAVDCAVAALDA 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L DS K +++++ L R++ Sbjct: 303 LSDSEVKDAMIQLAKESLVRVS 324 >gi|299768956|ref|YP_003730982.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1] gi|298699044|gb|ADI89609.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1] Length = 325 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 120/315 (38%), Positives = 184/315 (58%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A N Sbjct: 13 VASDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDNMQNAQR 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 73 LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNN 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E ++++AG Sbjct: 133 MTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAG- 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 Q + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T Sbjct: 192 QEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHST 251 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E + +I G V+ L + I++++ AL RA + A +L LPD+ + Sbjct: 252 GEEHAIIRRSIATG--GVDQLSQVIEIVQKSGALDYCHQRAQEETEAALQALSNLPDTPY 309 Query: 307 KKSLMEVVDFCLQRL 321 +++L+ + L R+ Sbjct: 310 RQALINLTQLALHRI 324 >gi|225024258|ref|ZP_03713450.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC 23834] gi|224943283|gb|EEG24492.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC 23834] Length = 339 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 119/322 (36%), Positives = 192/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +D+ +VN +I + + S+V +I + +Y+I +GGKRLRP+LT+ + +L Y Sbjct: 20 LPYFQQHLPRDLSRVNAVIERAVQSEVALISQIGRYIISAGGKRLRPVLTILSGKVLGYD 79 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 80 EDPLYALAAMVEFIHTSTLLHDDVVDESELRRGRKTANNMFGNAAAVLVGDFLYTRAFQL 139 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S + L+ ++ +AEGE+ QL N ++TE +Y+ VI+ KTA LF AA +V Sbjct: 140 MVSSGSLKILDVMADATNIIAEGEVLQLMNIGNTNITEAEYVQVIQYKTAKLFEAAAQVG 199 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG ALK YG ++G AFQ++DDVLDY G + E+GKN+G+D GKPTLP+I Sbjct: 200 AILAGATPEQENALKDYGRHIGTAFQIIDDVLDYSGNIEEIGKNVGDDLAEGKPTLPLIY 259 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q + + + S ++ + ++ AL A +A L Sbjct: 260 LMQNAEPPVADAVRHALEHADRS--YFEQIHAHVVQSDALAYCVSEARKAVDEALSCLAA 317 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ +++ ++ + L R++ Sbjct: 318 LPDNEVSQAMRQLAEESLARVS 339 >gi|254284097|ref|ZP_04959065.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B] gi|219680300|gb|EED36649.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B] Length = 321 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 122/322 (37%), Positives = 200/322 (62%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + ++E+V+ LI++++ SDV+M+ +V +Y++ +GGKRLRP+L L L Sbjct: 2 IEAIRACVQSEVEQVDQLIIEQLHSDVDMVENVGQYIVDAGGKRLRPLLVLLAGEALGGC 61 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 ++H+ + +EFIHTATLLHDDVVD S LRRG+ A +GN SVLVGDFL ++AF + Sbjct: 62 TESHIRFSAVVEFIHTATLLHDDVVDVSTLRRGRPTANEAFGNAPSVLVGDFLYTRAFQL 121 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ + + L ++ T+AEGE+ QL+ + N D+ E Y+ VI KTA+LF++A + + Sbjct: 122 MVQLDNMDLLRHMADTTNTIAEGEVLQLARAGNPDIDESQYIDVITRKTAILFASACQGA 181 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A +QAL YG+NLGIAFQ++DDVLDY G+ GKNIG+D GK TLP++ Sbjct: 182 AMLANCDIKTQQALSQYGLNLGIAFQMIDDVLDYEGDPTVTGKNIGDDLNEGKTTLPLLH 241 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q G+K +++ ++ + S +L + +R + +L T RA A L Sbjct: 242 TMQTGSKPDRDLVAQSLREK--STASLSEVIAAVRRSGSLDFTRERARERHDLAMSGLDV 299 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L ++ K +L +++ L+R + Sbjct: 300 LQENRAKAALSDLLHLSLERAS 321 >gi|297518736|ref|ZP_06937122.1| octaprenyl diphosphate synthase [Escherichia coli OP50] Length = 286 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 122/285 (42%), Positives = 173/285 (60%), Gaps = 1/285 (0%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GGKR+RPM+ + A + Y G+ HV +A IEFIHTATLLHDDVVD+S +RRGK Sbjct: 1 YIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKA 60 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A +GN SVLVGDF+ ++AF M+ S + LE +S +AEGE+ QL + D Sbjct: 61 TANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPD 120 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 +TEE+Y+ VI SKTA LF AA + S ++AG + L+ YG LG AFQL+DD+LDY Sbjct: 121 ITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYN 180 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 + ++GKN+G+D GKPTLP++ A GT + ++ I G L+ M Sbjct: 181 ADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGN-GRHLLEPVLEAMN 239 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 +L T RA KA +L+ LPD+ W+++L+ + +QR Sbjct: 240 ACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQR 284 >gi|83594282|ref|YP_428034.1| farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170] gi|83577196|gb|ABC23747.1| Farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170] Length = 360 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 145/322 (45%), Positives = 214/322 (66%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + +L L D+++VN +I++R+ S + +IP + ++I +GGKRLRP+LTLA+A + Y Sbjct: 37 LDVLLTLVGGDLKRVNEIIVERMHSPIALIPQLAGHIIAAGGKRLRPLLTLASARLCGYE 96 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ H LA +EFIHTATLLHDDVVD+S LRRG+ +A +WGN+ SVLVGDFL S++F + Sbjct: 97 GERHAQLAACVEFIHTATLLHDDVVDESLLRRGRDSANALWGNKASVLVGDFLFSRSFEL 156 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + L LS + +AEGE+ QL + ++ TE YL VI+ KTA LF+AA + Sbjct: 157 MVEDGVLKVLGILSHASRVIAEGEVAQLITANDMATTEAQYLEVIRGKTAQLFAAACRIG 216 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + +AL +YGM LGIAFQLVDD LDY ++GK +G+DF +GK TLPVIL Sbjct: 217 AVVAERPEAEEEALDTYGMTLGIAFQLVDDYLDYSARQQDLGKTVGDDFMDGKITLPVIL 276 Query: 241 AFQRGTKREKNFWKSTINDGKIS--VENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 A+QRGT E+ FW+ + ++ ++L KA +M L +T RA YG++A+ +L Sbjct: 277 AYQRGTDDERAFWRRCMEAQDMAEPEKDLAKAIELMTRYGTLAETVERARHYGERARSAL 336 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 D K +L +VDFC++R Sbjct: 337 DIFADGPAKAALAGIVDFCIER 358 >gi|293610928|ref|ZP_06693227.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826580|gb|EFF84946.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123244|gb|ADY82767.1| octaprenyl-diphosphate synthase [Acinetobacter calcoaceticus PHEA-2] Length = 325 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 121/315 (38%), Positives = 185/315 (58%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A N Sbjct: 13 VASDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDNMANAQR 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 73 LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNN 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E ++++AG Sbjct: 133 MTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAG- 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 Q + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A R T Sbjct: 192 QEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALARST 251 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E + +I G V+ L + I++++ AL RA + A +L LPD+ + Sbjct: 252 GEEHAIIRRSIATG--GVDQLSQVIEIVQKSGALDYCNQRAQEETEAALQALSNLPDTPY 309 Query: 307 KKSLMEVVDFCLQRL 321 +++L+ + L R+ Sbjct: 310 RQALINLTQLALHRI 324 >gi|254230032|ref|ZP_04923431.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] gi|151937420|gb|EDN56279.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] Length = 287 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 118/286 (41%), Positives = 176/286 (61%), Gaps = 1/286 (0%) Query: 36 YLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKV 95 Y++ GGKRLRP+L + +A L Y+G+ H + A IEFIHTATLLHDDVVD+S +RRGK Sbjct: 2 YIVSGGGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKA 61 Query: 96 AARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD 155 A +GN SVLVGDF+ +++F M+ E S + L+ +S +AEGE++QL + D Sbjct: 62 TANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSNAVNVIAEGEVQQLMNCNDPD 121 Query: 156 VTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYR 215 TEE Y+ VI SKTA LF +A ++ +++ V A+++YG LG AFQL+DDV+DY Sbjct: 122 TTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVMDYT 181 Query: 216 GEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMR 275 + +MGKN+G+D GKPTLP++ A + T + I ++ L+ +M+ Sbjct: 182 SDGEDMGKNVGDDLAEGKPTLPLLHAMRNTTPDNALMIREAIEKAN-GMDRLEDILAVMK 240 Query: 276 ENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 E +L T +A KA + L LP+S +K++L+ + +QR Sbjct: 241 EAGSLEYTTQKALEEADKAIEELSVLPESEYKQALITLAHVAVQRT 286 >gi|167647338|ref|YP_001685001.1| polyprenyl synthetase [Caulobacter sp. K31] gi|167349768|gb|ABZ72503.1| Polyprenyl synthetase [Caulobacter sp. K31] Length = 322 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 151/320 (47%), Positives = 205/320 (64%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L L DM V+ LI R+ S+V +IP + ++LI +GGKRLRP+LT+ATA + Sbjct: 1 MDRLVRLAAADMAGVDALITARMQSEVPVIPALAEHLIAAGGKRLRPLLTVATARLAGSD 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF + Sbjct: 61 NAACLKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGAAQSVLVGDFLFARAFEL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET S ALE L+ + +AEGE+ QL+ S +L++++ YL +I +KTA LF+AA E Sbjct: 121 MVETSSMRALEILAKASRVIAEGEVLQLTRSHDLNLSQALYLEIIAAKTAELFAAASEAG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + AGV +AL++YGMNLG+AFQL DD LDY G +GKN G+DFR GK TLP++L Sbjct: 181 GVSAGVSADKSEALRAYGMNLGLAFQLADDALDYGGTTEALGKNAGDDFREGKATLPLLL 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A R RE FW+ I + + + ++A ++ AL T A Y KAK +L Sbjct: 241 AIARSGPREAEFWERAIGRREQTEADFRRARELIVGTGALEATLDLASEYADKAKLALAS 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P + W+ SL + DF + R Sbjct: 301 FPANDWRASLESLADFAVSR 320 >gi|291612793|ref|YP_003522950.1| trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1] gi|291582905|gb|ADE10563.1| Trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1] Length = 320 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 127/320 (39%), Positives = 188/320 (58%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ L+ L DM V+ +I R+ S+V ++ V +Y+I SGGKRLRP L L +A Y Sbjct: 1 MENLKRLLASDMAAVDAVIRARLHSEVALVNQVGEYIINSGGKRLRPALVLLSAQAFGYG 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M Sbjct: 61 GKHHHDLAAVVEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDFLYSRSFQM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ ++ L+ +AEGE+ QL + V +Y+ VI KTA LF AA+ + Sbjct: 121 MVDVGEMRVMQTLADATNVIAEGEVLQLLNCHDASVDIPNYMRVIHCKTAKLFEAAMRLG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + +A YGM+LG AFQL+DDVLDY + + GK++G+D GKPTLP+I Sbjct: 181 AILGKASTADEEAAAKYGMHLGTAFQLIDDVLDYSADEAQTGKHLGDDLAEGKPTLPLIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q GT + + I G + + ++R+ AL T +A + A ++ Sbjct: 241 AMQHGTGAQAAVVRDAIEQGDVG--KFTEVLTVIRDTGALEFTRQQALRETETACAAIAA 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 + DS +K+ L+E+ F R Sbjct: 299 MADSKYKQCLLELAHFAATR 318 >gi|91776572|ref|YP_546328.1| trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT] gi|91710559|gb|ABE50487.1| Trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT] Length = 322 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 192/320 (60%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ +DM+KV+ +I K + SDV +I V Y+I SGGKRLRP L L +A Sbjct: 3 LAFIQSCIAEDMQKVDAVIRKALHSDVVLINQVADYIINSGGKRLRPTLVLLSAGAFGRI 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 H LA IE IHT+TLLHDDVVD+S+LRRGK A ++GN SVLVGDF+ S+ F M Sbjct: 63 EAKHHELAAIIELIHTSTLLHDDVVDESSLRRGKATANTLFGNAASVLVGDFIYSRTFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ +S +E LS T+AEGE+ QL + D+T+E YL VI KTA LF AA + Sbjct: 123 MVGIQSMRVMEVLSDATNTIAEGEVLQLLNVHDADITDEAYLRVIHYKTAKLFEAATRLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I G A+ YGM LG AFQLVDDVLD G+ +E+GKN+G+D GKPTLP++ Sbjct: 183 AIICGTDAQDEAAMAEYGMRLGTAFQLVDDVLDLSGDSSEIGKNLGDDLAEGKPTLPLLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT+ + +++I G + + L ++ AL A + ++ Sbjct: 243 AMRHGTEAQHEIIRNSIEKGGL--QELPAVVEAVKATGALEHVRELAKAEAAAGCAAIMH 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S++K++L+ + DF + R Sbjct: 301 LPESTYKEALLRLADFAVSR 320 >gi|317401225|gb|EFV81869.1| octaprenyl-diphosphate synthase [Achromobacter xylosoxidans C54] Length = 321 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L + DM+ V+ +I +R+ SDV +I + Y+I +GGKR+RP + L A L Y+ Sbjct: 3 LPALIAPIVDDMKAVDAVIRERLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LLA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M Sbjct: 63 GTHHQLLAAVVEFIHTATLLHDDVVDESDLRRGRETANAVFGNAASVLVGDYLYSRSFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S + LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V Sbjct: 123 MVEADSMRIMSILSEATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG A +YG ++G AFQLVDDVLDY G+ +GKN+G+D R GKPTLP+I Sbjct: 183 AVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAAALGKNVGDDLREGKPTLPLIR 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + GT +++ + I G ++ AL A + +A+++L Sbjct: 243 VMEVGTPQQQQLIRDAIKTGDADF---AAVAAAIQATDALEHARQAAVAEADRAREALSA 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S + SL+E F + R Sbjct: 300 YPVSPFLNSLLEFCAFAVNR 319 >gi|126726042|ref|ZP_01741884.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium HTCC2150] gi|126705246|gb|EBA04337.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium HTCC2150] Length = 332 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 138/320 (43%), Positives = 204/320 (63%), Gaps = 2/320 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L +M +VN +I R+ S+ IP+V +L+ +GGKR+RPM+TLA A M Y G Sbjct: 14 LAKALADEMAQVNDMIRARMASEHAPRIPEVTAHLVEAGGKRIRPMMTLAAAKMCGYDGP 73 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 H+ LA +EFIHTATLLHDDVVD+S+ RRG+ A L+W N++S+LVGD+L ++AF +++ Sbjct: 74 YHINLAATVEFIHTATLLHDDVVDESSQRRGRATANLLWDNKSSILVGDYLFARAFQLMV 133 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 E +S L+ LS + T+AEGE+ Q++ +++L+ E YL V++ KTA LFSAA EV + Sbjct: 134 EAESLTVLDILSNASATIAEGEVLQMTAAQDLETDEATYLKVVRGKTAALFSAATEVGGV 193 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 IA +AL +G LGI+FQ+VDD+LDY G + +GKNIG+DFR K TLPVI A Sbjct: 194 IANAPAEHTKALFDFGDALGISFQIVDDLLDYDGSLA-IGKNIGDDFRERKLTLPVIKAV 252 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 E+ FW TI GK + + A +++++ L T A + KAK SL +P Sbjct: 253 AMADAEERAFWVKTIEKGKQDDGDFEHALSLLKKHDTLNATRTEALEWRDKAKASLSIIP 312 Query: 303 DSSWKKSLMEVVDFCLQRLN 322 S + L+++ D+ + R++ Sbjct: 313 QSELRDMLLDLADYVVARIS 332 >gi|294789130|ref|ZP_06754369.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453] gi|294482871|gb|EFG30559.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453] Length = 324 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 122/322 (37%), Positives = 195/322 (60%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + D+ +VN ++ + + SDV +I + Y+I +GGKRLRP+LT+ + L Y Sbjct: 5 IPYFQQNLEHDLSRVNLVVNQAVQSDVALISQIGTYIIGAGGKRLRPILTILSGKCLGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DDKLYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S + LE ++ +AEGE+ QL N+D+TE YL VI+ KTA LF AA +V Sbjct: 125 MVGSGSLKILEVMADATNIIAEGEVMQLMNIGNIDITEAQYLQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG + ALK++GM +G AFQ++DDVLDY G V ++GKN+G+D GKPTLP+I Sbjct: 185 AILAGATHEQETALKNFGMYMGTAFQIIDDVLDYSGSVEQIGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q+G ++ + + E + + E+ AL +A +A L+ Sbjct: 245 LMQQGNDVAAQDVRTALQNA--DREYFDQIHAHVTESDALNYCMEQAKKAVAQAIGCLKM 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP++ ++ ++ + ++R++ Sbjct: 303 LPENEVTVAMRQMAELSVERVS 324 >gi|332526525|ref|ZP_08402637.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2] gi|332110793|gb|EGJ10970.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2] Length = 313 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 129/311 (41%), Positives = 193/311 (62%), Gaps = 2/311 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M +V+ ++ R+ S V +I + Y+I +GGKR+RP L L + L +RG LA + Sbjct: 5 MRQVDAVLRARLSSKVALIDQIASYIISAGGKRMRPRLLLLFSEALGFRGPERYELAAVV 64 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHT+TLLHDDVVD+S+LRRG+ A ++GN +VLVGDFL S++F M++ KS LE Sbjct: 65 ELIHTSTLLHDDVVDESSLRRGRATANSMFGNAAAVLVGDFLYSRSFQMMVSVKSMRVLE 124 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ +AEGE+ QL + D+ ++YL VI+ KTA LF A+ + +++AG V Sbjct: 125 VLAEATNVIAEGEVLQLMNMHDADLAVDEYLRVIRFKTAKLFEASARLGAVLAGASAEVE 184 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A YG +LG AFQLVDD+LDY G +E+GKN+G+D R GKPTLP+++A +RGT E+ Sbjct: 185 EACADYGRSLGTAFQLVDDLLDYEGNASELGKNVGDDLREGKPTLPLLIAMERGTAEERE 244 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G++ E L++ I+R AL T A + A+ +L LP S +++L+ Sbjct: 245 LIRHAIEHGEL--ERLQQIIDIVRRTGALEATREAAQAQADIARATLELLPVSKAREALL 302 Query: 312 EVVDFCLQRLN 322 E + R + Sbjct: 303 EFCFRAVHRSS 313 >gi|50085967|ref|YP_047477.1| octaprenyl-diphosphate synthase [Acinetobacter sp. ADP1] gi|49531943|emb|CAG69655.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter sp. ADP1] Length = 325 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 116/315 (36%), Positives = 183/315 (58%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RGDNHVL 66 D ++ I + I S V ++ V K+++ +GGKR+RP++ L A + H Sbjct: 13 VASDFAAMDTFINEGITSKVALVMAVSKHVVEAGGKRMRPIMCLLAAKACGSTDLEQHRK 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+S+AF ++++ Sbjct: 73 LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLISRAFDLLVDLND 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL + + TE+ YL++I KT+ LF A E +++++G Sbjct: 133 MVLLKDFSTGTCEIAEGEVLQLQSQHDPETTEQTYLNIIHGKTSRLFELATEGAAILSG- 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A Q Sbjct: 192 TPEYREPLRHFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALQHTQ 251 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E + + +I G + L++ I++++ AL RA Q A +L+ LP+S Sbjct: 252 GEEHDIVRRSIATG--GIHQLEQVIQIVQQSGALDYCRKRAEEETQAALAALQHLPESEA 309 Query: 307 KKSLMEVVDFCLQRL 321 +++L + L R+ Sbjct: 310 RQALFNLTQLALHRI 324 >gi|126642763|ref|YP_001085747.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978] gi|126388647|gb|ABO13145.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978] Length = 325 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 121/315 (38%), Positives = 186/315 (59%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A + N Sbjct: 13 VATDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACDLDNMQNAQR 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 73 LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNN 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E ++++AG Sbjct: 133 MTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAG- 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 Q + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T Sbjct: 192 QEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHST 251 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E + +I G V+ L K I++++ AL + RA + A +L LPD+ + Sbjct: 252 GEEHAIIRRSIATG--GVDQLPKVIEIVQKSGALDYCQRRAQEETEAALQALSILPDTPY 309 Query: 307 KKSLMEVVDFCLQRL 321 +++L+ + L R+ Sbjct: 310 RQALINLTRLALHRI 324 >gi|262281247|ref|ZP_06059029.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus RUH2202] gi|262257478|gb|EEY76214.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus RUH2202] Length = 325 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 120/315 (38%), Positives = 184/315 (58%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A N Sbjct: 13 VASDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDNMANAQR 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 73 LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNN 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E ++++AG Sbjct: 133 MTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAG- 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 Q + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T Sbjct: 192 QEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHST 251 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E + +I G V+ L + I++++ AL RA + A +L LPD+ + Sbjct: 252 GDEHAIIRRSIATG--GVDQLSQVIEIVQKSGALDYCHQRAQEETEAALQALSNLPDTPY 309 Query: 307 KKSLMEVVDFCLQRL 321 +++L+ + L R+ Sbjct: 310 RQALINLTQLALHRI 324 >gi|54307607|ref|YP_128627.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum SS9] gi|46912030|emb|CAG18825.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum SS9] Length = 323 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 131/320 (40%), Positives = 195/320 (60%), Gaps = 1/320 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM V+ I ++ SDV +I + Y++ GGKRLRPML + A L Y+G Sbjct: 4 KAIQALTANDMAGVDAKIQAQLNSDVALINQLGFYIVSGGGKRLRPMLVVLAARALGYQG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H+ A +EFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 64 DKHITAAAFVEFIHTATLLHDDVVDESDMRRGKDTANAAFGNAASVLVGDYIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +S + L+ +S +AEGE++QL + + TE++Y+ VI SKTA LF AA ++S+ Sbjct: 124 TSLRSLKILDIMSEATNVIAEGEVQQLMNCNDPNTTEDNYMQVIYSKTARLFEAATQISA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +I V AL+ YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A Sbjct: 184 IITESSTEVEVALQDYGRYLGTAFQLIDDVLDYVADGKEMGKNVGDDLSEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G + + + I ++ L MRE +L T+ RA +KA +L + Sbjct: 244 MHNGNEAQSAMIREAIEKSN-GMDKLNDILAAMREAGSLEYTQQRAEEEAEKAIAALAPI 302 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 +S +K++L+++ ++R Sbjct: 303 AESDYKEALIQLAHLAVKRT 322 >gi|73542643|ref|YP_297163.1| trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134] gi|72120056|gb|AAZ62319.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134] Length = 325 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 132/313 (42%), Positives = 190/313 (60%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L +A Y G+ H L Sbjct: 13 VAADMRAVDAVIRQRLSSEVPLIEQIGEYIISAGGKRLRPVILLMSARAFGYDGNRHHEL 72 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 73 AAVVEFIHTATLLHDDVVDESELRRGRETANAVFGNAASVLVGDFLYSRAFQMMVDAGSM 132 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS +AEGE+ QL + DVT E YL VI+ KTA LF A+ ++ +++AG Sbjct: 133 RIMEILSNATNVIAEGEVLQLLNMHDPDVTIERYLQVIRYKTAKLFEASAQLGAVLAGAD 192 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++ + GT Sbjct: 193 AAMEEAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLLEYGTP 252 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G E+ F + + AL T A + A+ + + P S WK Sbjct: 253 EQRVLAREAIVQG--GTEHFDAVFSAIHASGALDVTFEAARREAEAAEKAAQQFPASDWK 310 Query: 308 KSLMEVVDFCLQR 320 +L+ + +F LQR Sbjct: 311 DTLIALCEFSLQR 323 >gi|148260434|ref|YP_001234561.1| polyprenyl synthetase [Acidiphilium cryptum JF-5] gi|146402115|gb|ABQ30642.1| Polyprenyl synthetase [Acidiphilium cryptum JF-5] Length = 344 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 147/314 (46%), Positives = 206/314 (65%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 + D+ + N IL R+ SDVE+IP + +LI +GGKRLRP+LTLA A + YRG+ H+ Sbjct: 29 VLQDDLTETNRTILARMASDVELIPQLAAHLIAAGGKRLRPLLTLAAARLCGYRGERHIH 88 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL ++AF +++E S Sbjct: 89 LAACVEFIHTATLLHDDVVDESGLRRGLASANAVFGNKASVLVGDFLFARAFELMVEDGS 148 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L L + T+AEGE+ QL+ +L Y VI+ KTA LF+AA EV ++A Sbjct: 149 LDVLRILCNASATIAEGEVLQLTTQNDLSTDIPRYFKVIEGKTAALFAAACEVGGVVADR 208 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++V AL YG LG+AFQLVDD LDY + NE+GK +G+DFR GK T PV++A+ G Sbjct: 209 DSAVCGALACYGAALGMAFQLVDDALDYAADQNELGKTVGDDFREGKLTYPVLVAYAAGD 268 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW+ TI DG+ + +L A ++R + A+ T A ++ +KAKD+L LPD Sbjct: 269 GPERAFWRRTIEDGEQTETDLATALDLIRRHDAIGQTIREADAFARKAKDALATLPDDPL 328 Query: 307 KKSLMEVVDFCLQR 320 + +ME D+ + R Sbjct: 329 RALMMEAADYAVSR 342 >gi|165918704|ref|ZP_02218790.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334] gi|165917639|gb|EDR36243.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334] Length = 332 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 123/321 (38%), Positives = 192/321 (59%), Gaps = 3/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L D+E V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y Sbjct: 12 IESLRQPVQNDIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYE 71 Query: 61 GD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 D H LA IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF Sbjct: 72 QDVEHQELATVIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQ 131 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+ Sbjct: 132 ILARRSNVPIMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEI 191 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++A + ++++ ++G++LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I Sbjct: 192 GAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLI 251 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + I +G + ++L+ +M E RA T+ A + +KA L+ Sbjct: 252 YAKQQAQPAQAEHIREAIKNGDL--DDLQSIMKLMDETRAREYTQQCALTQAEKAHTYLQ 309 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + F + R Sbjct: 310 QLPPSPYRDALNALTQFVVSR 330 >gi|83952381|ref|ZP_00961112.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM] gi|83836054|gb|EAP75352.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM] Length = 333 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 142/312 (45%), Positives = 205/312 (65%), Gaps = 1/312 (0%) Query: 12 MEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ME VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y GD+ LA Sbjct: 22 MEAVNALIRARMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAAICGYEGDHDERLAAT 81 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +++ET S L Sbjct: 82 VEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRVL 141 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 + L+ + T+AEGE+ QL+ S+++ TE YL V++ KTA LFSAA EV +IAG + V Sbjct: 142 DILANASATIAEGEVLQLTASRDIATTEATYLQVVRGKTAALFSAATEVGGVIAGASDEV 201 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 AL YG LGIAFQ+ DD+LD++G+ + GKN+G+DFR K TLP+I A + + E+ Sbjct: 202 TGALYDYGDALGIAFQIADDLLDFQGDSAKTGKNVGDDFRERKLTLPLIKAIAKADETER 261 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 FW+ TI G +L A ++ ++RAL +T A + +A+ +L LP + L Sbjct: 262 AFWRRTIEKGAQGEGDLDHAIALLHKHRALEETLADAQGWAARAQAALAKLPAHPVRDML 321 Query: 311 MEVVDFCLQRLN 322 ++ D+ + R++ Sbjct: 322 GDLSDYVVARVS 333 >gi|291279049|ref|YP_003495884.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1] gi|290753751|dbj|BAI80128.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1] Length = 327 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 120/320 (37%), Positives = 198/320 (61%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +L D++ V +LK + S+V+M+ +V Y+ SGGKRLRP+ + ++ + Y Sbjct: 6 INEVFELLKDDIKSVEDELLKNLDSEVQMVNEVASYVFKSGGKRLRPVFLILSSKLSGYE 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G+ ++++ +E+IHTATLLHDDV+D + RRGK AA V+GN +VL GDFL S+AF Sbjct: 66 GNRSIVISGVVEYIHTATLLHDDVIDGAMYRRGKKAANRVFGNDITVLCGDFLYSRAFVN 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ E L+ A T++EGE+ QL + N D+T EDYL +I SKTA+LFS+ E+ Sbjct: 126 LVKDGDPEVQMILANAAKTMSEGEVFQLVKTANFDLTMEDYLKIIFSKTAILFSSCCEIG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ R+ L+ YG +G+AFQ+ DD+LDY G+ N+ GK G D + GK TLP++L Sbjct: 186 AVLSKSDKDKRENLREYGRLIGLAFQMSDDILDYLGDENKTGKKPGTDLKEGKMTLPLLL 245 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +EK K I S ++L +M+++ E SY +KAK+ L+ Sbjct: 246 LRDLIDDKEKKNLKEIILKEDPSEDDLIYIIGLMKKHNIKEKAEQFVDSYIEKAKEKLQI 305 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P+S++K++L+ + ++ ++R Sbjct: 306 FPNSTYKEALIYLSEYVIKR 325 >gi|2547044|dbj|BAA22867.1| solanesyl diphosphate synthase [Rhodobacter capsulatus] Length = 325 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 115/315 (36%), Positives = 187/315 (59%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66 +D ++ I + I S V ++ V K+++ +GGKR+RP++ L A + Sbjct: 13 VAQDFAAMDQFINEGISSKVALVMSVSKHVVEAGGKRMRPIMCLLAAYACGETNLKHAQK 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 73 LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLDN 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL D TE+ YL +I KT+ LF A E ++++AG Sbjct: 133 MILLKDFSTGTCEIAEGEVLQLQAQHQPDTTEDIYLQIIHGKTSRLFELATEGAAILAG- 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + R+ L+ + + G AFQ++DD+LDY + + +GKNIG+D GKPTLP+I A Q Sbjct: 192 KPEYREPLRRFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPTLPLIAAMQNTQ 251 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +++ + +I G S L++ I++ + AL RA ++A +L LP+S++ Sbjct: 252 GEQRDLIRRSIATGGTS--QLEQVIAIVQNSGALDYCHKRATEETERALQALEILPESTY 309 Query: 307 KKSLMEVVDFCLQRL 321 +++L+ + L R+ Sbjct: 310 RQALVNLTRLALDRI 324 >gi|29653729|ref|NP_819421.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493] gi|161831382|ref|YP_001596323.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331] gi|29540992|gb|AAO89935.1| farnesyl pyrophosphate synthetase [Coxiella burnetii RSA 493] gi|161763249|gb|ABX78891.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331] Length = 332 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 123/321 (38%), Positives = 190/321 (59%), Gaps = 3/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L D+E V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y Sbjct: 12 IESLRQPVQNDIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYE 71 Query: 61 GD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 D H LA IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF Sbjct: 72 QDVEHQELATVIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQ 131 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+ Sbjct: 132 ILARRSNVPIMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEI 191 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++A + ++++ ++G +LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I Sbjct: 192 GAIVATKNETWQKSMAAFGFHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLI 251 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + I +G + ++L+ +M E RA T+ A +KA L+ Sbjct: 252 YAKQQAQPAQAEHIREAIKNGDL--DDLQSIMKLMDETRAREYTQQCALKQAEKAHTYLQ 309 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + F + R Sbjct: 310 QLPPSPYRDALNALTQFVVSR 330 >gi|94497263|ref|ZP_01303835.1| Farnesyltranstransferase [Sphingomonas sp. SKA58] gi|94423368|gb|EAT08397.1| Farnesyltranstransferase [Sphingomonas sp. SKA58] Length = 378 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 150/320 (46%), Positives = 215/320 (67%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +L M +VN +IL R+ S + +IP++ +LI GGKRLRPMLTLA A ++ Y Sbjct: 57 LDPIMNLVADGMNQVNAVILDRMQSRIPLIPELAGHLIAGGGKRLRPMLTLACADLVGYA 116 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA A+EFIHTATLLHDDVVD S +RRG+ A ++WGN SVLVGDFL S++F + Sbjct: 117 GARHYKLAAAVEFIHTATLLHDDVVDGSGMRRGRKTANIIWGNSASVLVGDFLFSRSFEL 176 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E +S + L+ LS + +AEGE+ QL+ + +D +EE YL +I +KTA LF+AA +S Sbjct: 177 MVEAESLKVLKILSGASAVIAEGEVNQLTAQRKIDTSEEQYLDIIGAKTAALFAAACRIS 236 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + QAL YG NLGIAFQL+DD +DY + MGK+ G+DFR+GK TLPVIL Sbjct: 237 AVVADRSEAEEQALDVYGRNLGIAFQLIDDAIDYESDEATMGKDAGDDFRDGKVTLPVIL 296 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A+ RG++ ++ FWK+ I ++S +L A ++R+ A+ DT RA YGQ+A D+L Sbjct: 297 AYARGSEADRAFWKAAIAGHRVSDADLAHATGLLRQTGAIADTLARARHYGQRAIDALGM 356 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 K +L E V+F + R Sbjct: 357 FDAGRAKAALTEAVEFAIAR 376 >gi|226951590|ref|ZP_03822054.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) [Acinetobacter sp. ATCC 27244] gi|294651249|ref|ZP_06728577.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC 19194] gi|226837665|gb|EEH70048.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) [Acinetobacter sp. ATCC 27244] gi|292822902|gb|EFF81777.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC 19194] Length = 347 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 119/315 (37%), Positives = 182/315 (57%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE-YRGDNHVL 66 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A Sbjct: 35 VATDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLTNMQQAQH 94 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 95 LAAVIEMLHTATLVHDDVVDESNLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNN 154 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL D TEE YL++I KT+ LF A E ++++AG Sbjct: 155 MTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEEIYLNIIHGKTSRLFELATEGAAILAG- 213 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T Sbjct: 214 TEEYREPLRRFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHST 273 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + +I G +E+L K I+ + L + RA A ++L+ LPD+ + Sbjct: 274 GEDHAIIRRSIATG--GIEHLDKVIEIVHHSGGLDYCQKRAQQETDAALEALKALPDNEY 331 Query: 307 KKSLMEVVDFCLQRL 321 +++LM + L RL Sbjct: 332 RQALMNLTLMALHRL 346 >gi|319944647|ref|ZP_08018914.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599] gi|319742086|gb|EFV94506.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599] Length = 329 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 186/321 (57%), Gaps = 9/321 (2%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---- 62 + +D+ +V+ +I +R+ S V +I + Y+I +GGKRLRP+L A L Y Sbjct: 9 IISEDLAEVDRVIKERLDSPVALIRTIATYIISAGGKRLRPVLLTLFARALGYGQTEQQR 68 Query: 63 ---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 +H L+A +EFIHTATLLHDD+VD+S LRRG A +GN SVLVGDFL S++F Sbjct: 69 AQGHHWLMAAVVEFIHTATLLHDDIVDESTLRRGAPTANAQFGNAASVLVGDFLYSRSFQ 128 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M++E + L+ L+ +AEGE+ QL + DV E YL VI+ KTA LF A+ + Sbjct: 129 MMVEVEQLHILKTLADATNVIAEGEVLQLLNCNDPDVDEAAYLQVIRFKTAKLFEASARI 188 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++AG + A +YG +LG AFQ++DDVLDY GE +GKNIG+D R GK TLP+I Sbjct: 189 GAVLAGATPELEDAAAAYGRHLGTAFQIIDDVLDYSGESETLGKNIGDDLREGKATLPLI 248 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + G+ ++ + I +G+ +L ++ AL A +A +L Sbjct: 249 RVMEVGSPEDREIVRQAILNGETEHFDL--IHQAIQRCDALGYARQLAEQEANRAHAALA 306 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 +P S ++++L+ + + + R Sbjct: 307 QMPPSQYREALVYLSSYSVSR 327 >gi|171463010|ref|YP_001797123.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192548|gb|ACB43509.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 334 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 116/313 (37%), Positives = 184/313 (58%), Gaps = 3/313 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHVLLA 68 D + ++ +I +R+ S V +I + Y+I +GGKR+RP L + A L + + + ++ Sbjct: 20 DFKALDEVIRQRLASKVALIDQISTYIIQAGGKRVRPALLMLVAKALANGKQTPHILEMS 79 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M+++ Sbjct: 80 AVVEFIHTATLLHDDVVDESTLRRGRKTANAAFGNAASVLVGDFLYSRAFQMMVDPNDLR 139 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ LS T+AEGE+ QL + +V EE YL VI+ KTA LF A+ E+ +++A N Sbjct: 140 VMQILSDATNTIAEGEVLQLLNMNDPEVDEESYLQVIRYKTAKLFEASTELGAILANATN 199 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 + R+ ++G ++G AFQL+DD+LDY +MGKN G+D R GKPTLP+I + G+ Sbjct: 200 AQREQAAAFGRHIGTAFQLMDDLLDYTANAAQMGKNAGDDLREGKPTLPLIYLLENGSSE 259 Query: 249 EKNFWKSTINDGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 E+ ++ I + +++ + ++ + AL T+ A A L+ P + Sbjct: 260 EQLLVRAAIEQNQDLPDDVFAQILAAVQNSGALEYTQAAAKREADLAMSYLKDFPANPAS 319 Query: 308 KSLMEVVDFCLQR 320 ++L + + L R Sbjct: 320 QALEALCAYSLTR 332 >gi|331004838|ref|ZP_08328256.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989] gi|330421369|gb|EGG95617.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989] Length = 321 Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 139/315 (44%), Positives = 204/315 (64%), Gaps = 2/315 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +D E VN LIL +I SDV ++ D+ +YLI +GGKRLRP+L L + L+Y+GD H L Sbjct: 9 VARDFEAVNQLILGQIHSDVGLVEDIGQYLIEAGGKRLRPLLVLLVSNALQYQGDKHHDL 68 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A IEFIH+ATLLHDDVVD S LRRG++ A WGN SVLVGDFL S+AF M++ Sbjct: 69 AAIIEFIHSATLLHDDVVDMSDLRRGRLTANAKWGNAPSVLVGDFLYSRAFQMMVAVGDM 128 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ LS ++EGE++QL +K D++E+ Y VI KTA+LF AA E ++ ++G + Sbjct: 129 SIMKILSDTTNLISEGEVQQLINAKKPDISEKGYFEVIHKKTAILFEAACETAATLSGAE 188 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++R+ L +YG ++GIAFQL+DD LDY G E+GKN+G+D GKPTLP+I A ++ Sbjct: 189 ETLRRQLTAYGYHVGIAFQLIDDALDYTGNTEELGKNVGDDLAEGKPTLPLIYAMSNSSE 248 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + +I +G S L + I+R++ AL T A + A +L LPDS++K Sbjct: 249 EQSAMIADSIRNGDKS--QLSQIINIIRDSGALDYTLNLAKEHAMSAIKTLDALPDSTYK 306 Query: 308 KSLMEVVDFCLQRLN 322 ++++++ +F + R N Sbjct: 307 QAMIDLAEFSISRSN 321 >gi|300690362|ref|YP_003751357.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07] gi|299077422|emb|CBJ50048.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07] Length = 322 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 132/313 (42%), Positives = 193/313 (61%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG +H L Sbjct: 10 VAEDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGKHHHEL 69 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 70 AAVVEFIHTATLLHDDVVDESELRRGRRTANAVFGNAASVLVGDFLYSRAFQMMVQADSM 129 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G Sbjct: 130 RVMQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGAD 189 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ Sbjct: 190 AATEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIHLLSHGTE 249 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G E+ F ++ + AL T A A +++ LP S + Sbjct: 250 EQRALARQAIEQG--GTEHFDAIFAAIQASGALEYTRKTAEREASAAAEAINALPPSLFL 307 Query: 308 KSLMEVVDFCLQR 320 ++L+++ F LQR Sbjct: 308 QTLIDLCAFSLQR 320 >gi|153207271|ref|ZP_01946035.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212218206|ref|YP_002304993.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154] gi|120576759|gb|EAX33383.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012468|gb|ACJ19848.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154] Length = 332 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 123/321 (38%), Positives = 192/321 (59%), Gaps = 3/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L D+E V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y Sbjct: 12 IESLRQPVQNDIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYE 71 Query: 61 GD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 D H LA IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF Sbjct: 72 QDVEHQELATVIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQ 131 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+ Sbjct: 132 ILARRSNVPIMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEI 191 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++A + ++++ ++G++LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I Sbjct: 192 GAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDASPLDKNVGDDLAEGKATLPLI 251 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + I +G + ++L+ +M E RA T+ A + +KA L+ Sbjct: 252 YAKQQAQPAQAAHIREAIKNGDL--DDLQSIMKLMDETRAREYTQQCALTQAEKAHTYLQ 309 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + F + R Sbjct: 310 QLPPSPYRDALNALTQFVVSR 330 >gi|255318820|ref|ZP_05360046.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82] gi|262378919|ref|ZP_06072076.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164] gi|255304076|gb|EET83267.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82] gi|262300204|gb|EEY88116.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164] Length = 325 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 115/315 (36%), Positives = 186/315 (59%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66 +D ++ I + I S V ++ V K+++ +GGKR+RP++ L A + Sbjct: 13 VAQDFAAMDQFINEGISSKVALVMSVSKHVVEAGGKRMRPIMCLLAAYACGETNLKHAQK 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 73 LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLDN 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL D TE YL +I KT+ LF A E ++++AG Sbjct: 133 MILLKDFSTGTCEIAEGEVLQLQAQHQPDTTEAVYLQIIHGKTSRLFELATEGAAILAG- 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + R+ L+ + + G AFQ++DD+LDY + + +GKNIG+D GKPTLP+I A Q Sbjct: 192 KPEYREPLRRFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPTLPLIAAMQNTQ 251 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +++ + +I G S L++ I++ + AL RA ++A +L LP+S++ Sbjct: 252 GEQRDLIRRSIATGGTS--QLEQVIAIVQNSGALDYCHKRATEETERALQALEILPESTY 309 Query: 307 KKSLMEVVDFCLQRL 321 +++L+ + L R+ Sbjct: 310 RQALVNLTRLALDRI 324 >gi|304311022|ref|YP_003810620.1| Polyprenyl synthetase [gamma proteobacterium HdN1] gi|301796755|emb|CBL44967.1| Polyprenyl synthetase [gamma proteobacterium HdN1] Length = 322 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 120/319 (37%), Positives = 187/319 (58%), Gaps = 2/319 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + L D V+ +I ++I S V ++ + Y+I +GGKRLRP+L L + Y ++ Sbjct: 6 MRALVADDFIAVDEIIRQQIQSKVALVQTIGDYIISAGGKRLRPLLVLLGGRAVGYHKED 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 +LA IE +HTATLLHDDVVD S LRRG+ A WGN SVLVGD+L S++F M++ Sbjct: 66 LRILAATIELLHTATLLHDDVVDKSGLRRGRATANAQWGNAPSVLVGDYLYSRSFEMMVG 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + ++ LS +AEGE QLS +++ +EE Y+ +I+SKT+VL A+ ++++ Sbjct: 126 LGNMPVMKILSQATRIMAEGEALQLSRVRDVSTSEETYMQIIRSKTSVLLEASSHSAAVL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 A + R AL+ +G +LGIAFQL+DDVLD+RG+ +GKNIG+D GKPTLP+I + Sbjct: 186 ASATDYERHALRGFGEHLGIAFQLIDDVLDFRGDSQALGKNIGDDLAEGKPTLPLIFTMR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G + I +G +++ + L T +A+ + A L LPD Sbjct: 246 EGNAESAKLIHNAILEG--GSPDIEAIRSAVETAGGLEYTANKAHEHALLACHHLDALPD 303 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S ++++L ++ F + R + Sbjct: 304 SPYRQALHDLSHFAVARSH 322 >gi|21232167|ref|NP_638084.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767704|ref|YP_242466.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|188990821|ref|YP_001902831.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris pv. campestris str. B100] gi|21113920|gb|AAM42008.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573036|gb|AAY48446.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|167732581|emb|CAP50775.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris pv. campestris] Length = 332 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 127/322 (39%), Positives = 181/322 (56%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I Sbjct: 193 ALASGADAQVQQCLYDYGMQLGFAFQIADDVLDYAADATDLGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G E + + +R L + RA Y A+ +L Sbjct: 253 AIAHSDAATQQRLRQIVEQG--DAEAMPEVLTAIRATGGLDYSRQRAAEYAAAAEQALDG 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 311 LPPSPAVAALRGLARYAVERTH 332 >gi|302038674|ref|YP_003798996.1| polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii] gi|300606738|emb|CBK43071.1| Polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii] Length = 334 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 119/320 (37%), Positives = 192/320 (60%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M + D+ +++E V I K + S V ++ V +++ SGGKR+RP+ L +A + Y Sbjct: 13 MADVWDVYREELEGVEEQIRKNLDSSVALVNTVAAHILNSGGKRVRPLFVLLSAHLCGYA 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H L +EFIHTATLLHDDVVD++ LRRG+ A VWGNQ S+LVGD+L S+A C Sbjct: 73 GQDHQALGSLVEFIHTATLLHDDVVDEADLRRGRRTASKVWGNQISILVGDYLYSRAICQ 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ ++Q EALS +AEGE+ QL + N + E +YL +I+ KTA L +A+ ++ Sbjct: 133 IVDFRNQGINEALSEACRKMAEGEVLQLYYNGNPLMPESEYLRIIEHKTAGLIAASCKIG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G +++AL +G LGIAFQL DD LDY +GK +G+D R GK TLP++ Sbjct: 193 AIVGGATEELQEALFRFGQRLGIAFQLADDTLDYTANGEHLGKTLGQDLRQGKATLPLLH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q ++ ++ K + ++ E L++ +M+E ++ RA+++ AK L Sbjct: 253 LLQHCSEPDRQLIKDRMETRTLTDEELRRIVGLMQEYGSIAYAMERAHAFVAAAKRDLDL 312 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 D++ K++L D+ + R Sbjct: 313 FHDNTAKRALAIAADYMVTR 332 >gi|326403627|ref|YP_004283709.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301] gi|325050489|dbj|BAJ80827.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301] Length = 344 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 147/314 (46%), Positives = 206/314 (65%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 + D+ + N IL R+ SDVE+IP + +LI +GGKRLRP+LTLA A + YRG+ H+ Sbjct: 29 VLQDDLTETNRTILARMASDVELIPQLAAHLIAAGGKRLRPLLTLAAARLCGYRGERHIH 88 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL ++AF +++E S Sbjct: 89 LAACVEFIHTATLLHDDVVDESGLRRGLASANAVFGNKASVLVGDFLFARAFELMVEDGS 148 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L L + T+AEGE+ QL+ +L Y VI+ KTA LF+AA EV ++A Sbjct: 149 LDVLRILCNASATIAEGEVLQLTTQNDLSTDIPRYFKVIEGKTAALFAAACEVGGVVADR 208 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++V AL YG LG+AFQLVDD LDY + NE+GK +G+DFR GK T PV++A+ G Sbjct: 209 DSAVCGALAGYGAALGMAFQLVDDALDYAADQNELGKTVGDDFREGKLTYPVLVAYAAGD 268 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E+ FW+ TI DG+ + +L A ++R + A+ T A ++ +KAKD+L LPD Sbjct: 269 GPERAFWRRTIEDGEQTETDLATALDLIRRHDAIGQTIREADAFARKAKDALATLPDDPL 328 Query: 307 KKSLMEVVDFCLQR 320 + +ME D+ + R Sbjct: 329 RALMMEAADYAVSR 342 >gi|84683979|ref|ZP_01011881.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84667732|gb|EAQ14200.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Rhodobacterales bacterium HTCC2654] Length = 331 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 144/322 (44%), Positives = 205/322 (63%), Gaps = 2/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L D+ +V+ +I R+ S+ IP+V +L+ +GGKRLRPMLTLA+A + Y Sbjct: 11 ERLAAHLKDDLSQVDEMIRARMASEHAPRIPEVTAHLVDAGGKRLRPMLTLASARLCGYE 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H+ LA A+EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F + Sbjct: 71 GGHHIHLATAVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQL 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S L+ LS + T+ EGE+ QL+ +++L TE+ Y V++ KTA LF+AA EV Sbjct: 131 MTEADSLRVLQVLSNASATITEGEVLQLTAAQDLGTTEDTYFKVVRGKTAALFAAATEVG 190 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++AGV +AL YG LGIAFQ+VDD+LD+ G GKNIG+DFR K TLP+I Sbjct: 191 GILAGVSEDRIKALHDYGDALGIAFQVVDDLLDFWGGDAT-GKNIGDDFRERKLTLPIIK 249 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A RG E+ FWK T+ +L++A IM + AL DT A + +AK L Sbjct: 250 AIARGDDEERAFWKRTLEKNDQRDGDLERALEIMTAHGALDDTRAAALDWAARAKACLDA 309 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+ + L ++ D+ + RLN Sbjct: 310 LPEDPIRDMLSDIADYVVARLN 331 >gi|154706037|ref|YP_001425022.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway 5J108-111] gi|154355323|gb|ABS76785.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway 5J108-111] Length = 332 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 190/321 (59%), Gaps = 3/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L D+ V+ LI+K + S V +I + ++I SGGKRLRP++ L TA Y Sbjct: 12 IESLRQPVQNDIAAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACGYE 71 Query: 61 GD-NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 D H LA IEFIHTATLLHDDVVD S RRG+ A +WGN SVLVGDFL S+AF Sbjct: 72 QDVEHQELATVIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQ 131 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 ++ + ++ L+ ++EGE+ QL + D+ E Y VI+ KTA LFSAA E+ Sbjct: 132 ILARRSNVPIMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEI 191 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++A + ++++ ++G++LG+A+Q++DD+LDY + + + KN+G+D GK TLP+I Sbjct: 192 GAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLI 251 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A Q+ + + I +G + ++L+ +M E RA T+ A +KA L+ Sbjct: 252 YAKQQAQPAQAEHIREAIKNGDL--DDLQSIMKLMDETRAREYTQQCALKQAEKAHTYLQ 309 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP S ++ +L + F + R Sbjct: 310 QLPPSPYRDALNALTQFVVSR 330 >gi|110833312|ref|YP_692171.1| transferase [Alcanivorax borkumensis SK2] gi|110646423|emb|CAL15899.1| transferases [Alcanivorax borkumensis SK2] Length = 307 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 122/308 (39%), Positives = 187/308 (60%), Gaps = 3/308 (0%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 +N I + S+V +I +V Y+I SGGKRLRP++ + A Y+G HV +A IEF+ Sbjct: 1 MNQFISHHLDSNVPLIREVGDYIIQSGGKRLRPLIAVLCARASGYQGSRHVDVAAIIEFL 60 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134 HTATLLHDDVVD+S LRRG+ VWGN SVLVGDFL+S+A +++ + L+ S Sbjct: 61 HTATLLHDDVVDESNLRRGRPTVNAVWGNAASVLVGDFLISRALQLMVALRHPRLLDIFS 120 Query: 135 LVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ-NSVRQA 193 T++EGE+ QL ++ + +E++Y+ VI KTA +F +A E +++ + A Sbjct: 121 QSTNTISEGEVLQLINVRDPNTSEDNYMRVIHHKTAKMFESAAETGAVLGANDVSDHVDA 180 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 +YG +LGIAFQL+DDVLDY+G+ +E+GKN+G+D GKPTLP+I G+ + Sbjct: 181 FATYGRHLGIAFQLIDDVLDYQGDASELGKNVGDDLAEGKPTLPLIHTIANGSAEQATLI 240 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 K I G + E+L++ +R + L T +A + A D++ +P S +K +L + Sbjct: 241 KDAIRSGGL--EHLEQIVETVRASGGLQYTVDKAAEQTRIALDAIAQVPASPYKDALFRL 298 Query: 314 VDFCLQRL 321 + L+R Sbjct: 299 AEESLKRT 306 >gi|293602311|ref|ZP_06684757.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC 43553] gi|292819073|gb|EFF78108.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC 43553] Length = 321 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 189/320 (59%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L DM+ V+ +I +R+ SDV +I + Y+I +GGKR+RP + L A L Y Sbjct: 3 LPALIAPIADDMKAVDAVIRERLNSDVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LLA +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M Sbjct: 63 GTHHQLLAAVVEFIHTATLLHDDVVDESDLRRGRETANAVFGNAASVLVGDYLYSRSFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S + LS +AEGE+ QL + DV+++ YL V++ KTA LF AA +V Sbjct: 123 MVEADSMRIMSILSEATTVIAEGEVLQLLNVHDPDVSQDRYLQVVRYKTAKLFEAAAQVG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG A +YG ++G AFQLVDDVLDY G+ +GKN+G+D R GKPTLP+I Sbjct: 183 AVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAAALGKNVGDDLREGKPTLPLIR 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + GT +++ + I G + A AL A + +A+++L Sbjct: 243 VMEVGTPQQQQLIRDAIKTGDADFAAVAAAIQA---TDALEHARLAAVAEADRAREALSI 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S + SL+E F + R Sbjct: 300 YPVSPFLNSLLEFCAFAVNR 319 >gi|296160521|ref|ZP_06843337.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1] gi|295889270|gb|EFG69072.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1] Length = 330 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 128/313 (40%), Positives = 178/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM++VN +I R+ SDV +I + +Y+I +GGKRLRP L L A L + L Sbjct: 18 IAEDMQQVNRVIRHRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGETTGHRHEL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 138 RVMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGSD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 AKTEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 258 EQSALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECAKQEAQAAATAISSFPDSIFK 315 Query: 308 KSLMEVVDFCLQR 320 SL+E+ + R Sbjct: 316 DSLLELCSYSTAR 328 >gi|186477401|ref|YP_001858871.1| polyprenyl synthetase [Burkholderia phymatum STM815] gi|184193860|gb|ACC71825.1| Polyprenyl synthetase [Burkholderia phymatum STM815] Length = 330 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 125/313 (39%), Positives = 179/313 (57%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM++VN +I R+ S+V +I + +Y+I +GGKRLRP L L A L R L Sbjct: 18 IAEDMQQVNRVIRHRLASEVMLINQISEYIISAGGKRLRPALLLLVAGALGDRTGYRHEL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ ++++G Sbjct: 138 RVMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLSGAD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 ATTEAAAAEFGRRIGTAFQIMDDWLDYTGTPESMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + + F + + AL T A Q A ++ P S +K Sbjct: 258 EQSALAREAIEQG--GTDRFDEIFEAITRSGALDHTLECAKQEAQAAATAISSFPSSIYK 315 Query: 308 KSLMEVVDFCLQR 320 +SL+ + + R Sbjct: 316 ESLLNLCSYSTTR 328 >gi|126733996|ref|ZP_01749743.1| Farnesyltranstransferase [Roseobacter sp. CCS2] gi|126716862|gb|EBA13726.1| Farnesyltranstransferase [Roseobacter sp. CCS2] Length = 332 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 143/308 (46%), Positives = 203/308 (65%), Gaps = 2/308 (0%) Query: 15 VNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLA A M Y G HV LA +EF Sbjct: 25 VNTLIRERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYDGPYHVHLAATVEF 84 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IHTATLLHDDVVD+S+ RRG+ A L+W N +SVLVGD+L +++F +++ET S L+ L Sbjct: 85 IHTATLLHDDVVDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDIL 144 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + A T+AEGE+ QL+ + +L TE+ YL V++ KTA LFSAA+EV IA + +QA Sbjct: 145 ANAAATIAEGEVLQLTAASDLATTEDIYLQVVRGKTAALFSAAMEVGGEIADQDAATKQA 204 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L YG LGI+FQ+VDD+LDY G GKN+G+DFR K TLPVI A E++FW Sbjct: 205 LFDYGDALGISFQIVDDLLDY-GGTKATGKNVGDDFRERKLTLPVIRAIAAADAGERDFW 263 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 TI G+ +L A ++ ++ + T A ++ +KAK +L +PD + K+ L+++ Sbjct: 264 VRTIGKGRQEAGDLDHAIALLAKHGTMEATRLDALAWAEKAKSALDAIPDHALKQMLVDL 323 Query: 314 VDFCLQRL 321 D+ + R+ Sbjct: 324 ADYVVARI 331 >gi|325295651|ref|YP_004282165.1| trans-hexaprenyltranstransferase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066099|gb|ADY74106.1| Trans-hexaprenyltranstransferase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 324 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 109/324 (33%), Positives = 188/324 (58%), Gaps = 2/324 (0%) Query: 1 MKMLE--DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 MK+ + ++ +++EK + + S+V ++ Y++ SGGKR+RP LT+ + ++E Sbjct: 1 MKIFKPFEVIREELEKAEECSRELLNSNVRLVLTAGGYILDSGGKRVRPGLTIISGKLVE 60 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + + +A +E++HTATLLHDD+VD + LRRG+++A V+GN +VLVGD++ ++A Sbjct: 61 APLERLIPVATVMEYMHTATLLHDDIVDGAKLRRGRLSANEVFGNDVAVLVGDYMFAKAI 120 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 ++ + L+ + +AEGEL QL ++++TEE+Y +I KTA L S E Sbjct: 121 YILAVYGGDKVLKVAAQTVQEMAEGELLQLEKIGDINLTEEEYFDIIYRKTASLLSTCCE 180 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 V ++ + R+ALK+YG +G AFQLVDD DY + +GK G D R GK T P+ Sbjct: 181 VGGIVGEAREEERKALKNYGKFIGYAFQLVDDAFDYISDEKTIGKPAGNDIREGKVTYPL 240 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 + A ++ T+ EK ++ + + E ++ E + +T A Y ++AK+ L Sbjct: 241 LSALKKATESEKERISQVLSTVEPTKEQIESVRQFAFEKGGVEETIKLAREYVERAKEVL 300 Query: 299 RCLPDSSWKKSLMEVVDFCLQRLN 322 P+S +K+L E+ DF ++R + Sbjct: 301 NVFPESPLRKALFEIADFIVERTS 324 >gi|319760237|ref|YP_004124175.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str. BVAF] gi|318038951|gb|ADV33501.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str. BVAF] Length = 324 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 124/323 (38%), Positives = 186/323 (57%), Gaps = 2/323 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L +D+ VNF I KR+ S + +I +++Y+I SGGK++R + L A L Y+ Sbjct: 3 INQINKLIQQDIINVNFEIHKRLKSKITLINKLIQYIINSGGKKIRSSMVLLIAKSLTYK 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + HV++A IEFIH ATLLHDDVVD S +RRGK+ A +++GN SVLVGDF+ ++AF M Sbjct: 63 KNQHVIIATLIEFIHAATLLHDDVVDTSEMRRGKITANIMFGNAASVLVGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E +S L ++ +AEGE+ QL + +T Y+ +I +KTA LF A + S Sbjct: 123 MTELQSLRILSLMANAVNIIAEGEIMQLIHCHDPTITINHYMKIIYNKTARLFEVASQTS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY-RGEVNEMGKNIGEDFRNGKPTLPVI 239 +++A QAL +YG +GIAFQL+DDVLDY GK+ G D GKPTLP++ Sbjct: 183 AILANADIKQEQALGNYGKYIGIAFQLIDDVLDYDTSNTILFGKHTGNDLNEGKPTLPLL 242 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A T +E + + I +G + L M++ +L T A + +A L Sbjct: 243 HAIHHSTPKEASIIRQAIKNGN-NRHLLNIILNTMQQYGSLEYTRKCAETKINQAISCLS 301 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 LP S +KK+L + F + R + Sbjct: 302 ILPASPYKKALKNLAYFIIHRYH 324 >gi|54298645|ref|YP_125014.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris] gi|53752430|emb|CAH13862.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris] Length = 322 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 123/317 (38%), Positives = 199/317 (62%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + +L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+G + Sbjct: 6 IRELVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYKGKD 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +++E Sbjct: 66 HISLAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNLMVE 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA + ++ Sbjct: 126 VGIKEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIGPIL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I A Q Sbjct: 186 TNAPIEIRDSLYNYGLHLGNAFQLIDDALDYCSDAATLGKNIGDDLADGKATLPLIHALQ 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + ++ G +S +L I + + A+ T+ A A +L LPD Sbjct: 246 NGNATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALEILPD 303 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+++ F L+R Sbjct: 304 SVYKEALVDLAKFALER 320 >gi|153217175|ref|ZP_01950939.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587] gi|124113799|gb|EAY32619.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587] Length = 282 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 118/281 (41%), Positives = 168/281 (59%), Gaps = 1/281 (0%) Query: 40 SGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARL 99 GGKRLRP+L + +A L Y+G +H A IEFIHTATLLHDDVVD+S LRRGK A Sbjct: 1 GGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANA 60 Query: 100 VWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEE 159 +GN SVLVGDF+ +++F M+ E S + L+ +S +AEGE++QL + D TE Sbjct: 61 AFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEA 120 Query: 160 DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVN 219 Y+ VI SKTA LF AA ++ +++ V A+++YG LG AFQL+DDV+DY + + Sbjct: 121 SYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGD 180 Query: 220 EMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRA 279 EMGKN+G+D GKPTLP++ A Q G + + I + L + M + + Sbjct: 181 EMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGS 239 Query: 280 LVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 L T +A KA L LP+S +K++L+ + + R Sbjct: 240 LQYTIEKALHEADKAIAELAVLPESEYKQALITLAHMAVNR 280 >gi|254449834|ref|ZP_05063271.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus 238] gi|198264240|gb|EDY88510.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus 238] Length = 332 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 144/319 (45%), Positives = 206/319 (64%), Gaps = 2/319 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L +M+ VN LI R+ S+ IP+V +L+ +GGKRLRPMLTLA A M Y G Sbjct: 14 LAAALTDEMDAVNVLIRDRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAKMCGYGGP 73 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N +SVLVGD+L +++F +++ Sbjct: 74 YHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMV 133 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 ET S L+ L+ + T+AEGE+ QL+ + +L +E YL +++ KTA LFSAALEV + Sbjct: 134 ETGSLRVLDILANASATIAEGEVLQLTAASDLATSEAVYLQIVRGKTAALFSAALEVGGV 193 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 IA ++ +AL YG LGI FQ+VDD+LDY G + +GK++G+DFR K TLPVI A Sbjct: 194 IAQQDEALVKALYDYGDALGIGFQIVDDLLDYSG-TDAIGKDVGDDFRERKLTLPVIKAV 252 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 E+ FW TI G+ +L+ A ++ ++ L T+ A ++ +KAK +L LP Sbjct: 253 ALADATERAFWVRTIEKGRQEDGDLQTALGLLVKHGTLDATKSDALAWMEKAKAALAPLP 312 Query: 303 DSSWKKSLMEVVDFCLQRL 321 D K L+++ D+ + R+ Sbjct: 313 DHPIKLMLLDLADYVVARI 331 >gi|289209165|ref|YP_003461231.1| trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix] gi|288944796|gb|ADC72495.1| Trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix] Length = 322 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 129/320 (40%), Positives = 191/320 (59%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +L DM+ V+ I R+ S V +I + Y+I SGGKRLRP+L +A Sbjct: 3 INAIRELAADDMQAVDQCIRDRLSSPVVLINQLGHYIIHSGGKRLRPLLATLSARACAVE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD V+LA +EFIHTATLLHDDVVD S +RRG A ++GN+ +VLVGDFL S+AF M Sbjct: 63 GDEPVVLAAVVEFIHTATLLHDDVVDASEMRRGNETANHIFGNEAAVLVGDFLYSRAFEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S +E L+ +AEGE+ QL + DV E Y++VI+SKTA LF AA ++ Sbjct: 123 MVEVGSMRVMEILAHATNVIAEGEVMQLMNCHDADVDEARYMNVIQSKTAKLFEAACQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ + ++L YGM+LG AFQL+DDVLDY + GK +G+D GKPTLP+I Sbjct: 183 AILGERPRAEEESLAHYGMHLGTAFQLIDDVLDYSSDDAVTGKRMGDDLAEGKPTLPLIQ 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + GT ++ + I DG E ++ I+ AL RA + + A ++ Sbjct: 243 AIRVGTPEQQTVVRQAIEDG--GREQVEAVLEIVHATGALDYARERAAAETEAAIAAVSV 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+S +++L+++ F + R Sbjct: 301 LPESPHRQALIDLARFAVGR 320 >gi|260548979|ref|ZP_05823201.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624] gi|260408147|gb|EEX01618.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624] Length = 325 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 119/315 (37%), Positives = 184/315 (58%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH-VL 66 D ++ LI + I S V ++ V K+++ +GGKR+RP++ L A H Sbjct: 13 VATDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACGLDNMQHAQR 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+++AF ++++ + Sbjct: 73 LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLLVDLNN 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL D TEE YL +I KT+ LF A E ++++AG Sbjct: 133 MTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAG- 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 Q + R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A T Sbjct: 192 QEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHST 251 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E + +I G V+ L + I++++ AL + RA + A +L L D+ + Sbjct: 252 GEEHAIIRRSIATG--GVDQLTRVIEIVQKSGALDYCQRRAQEETEAALQALSILSDTPY 309 Query: 307 KKSLMEVVDFCLQRL 321 +++L+ + L R+ Sbjct: 310 RQALINLTRLALHRI 324 >gi|296116309|ref|ZP_06834925.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295977128|gb|EFG83890.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 334 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 137/325 (42%), Positives = 201/325 (61%), Gaps = 4/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L + DM N I++R+ S V +IP + +L+ +GGKRLRP+LTLA+A + Y Sbjct: 9 LRDLAEYLADDMAACNRAIVERMDSPVALIPQLAAHLVAAGGKRLRPLLTLASARLCGYE 68 Query: 61 GD----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 D HV LA +EFIHTATLLHDDVVD+S LRRG +A ++GN+ SVLVGDFL ++ Sbjct: 69 PDATHQRHVALAACVEFIHTATLLHDDVVDESTLRRGLASANAIFGNKASVLVGDFLFAR 128 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 +F ++ + S + + LS + T+AEGE+ Q+S +L + E YL VI KTA LF+AA Sbjct: 129 SFQLMTDDGSLKVMNILSSASATIAEGEVLQMSTQNDLSTSIEKYLEVIHGKTAALFAAA 188 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 V +++A V +AL SYG NLG+AFQLVDD LDY + +GK IG+DFR GK TL Sbjct: 189 CRVGAVVADQPLKVEEALDSYGTNLGMAFQLVDDALDYAADQATLGKTIGDDFREGKITL 248 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 PV+ A+ G ++++ FW+ I + + + ++L A ++ A+ T A Y + A Sbjct: 249 PVLTAYNAGDEKDRVFWRRVIEESEQTPDDLDHALELIARTNAIGITLDHATRYAEAASQ 308 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321 +L P S K+ L + + + RL Sbjct: 309 ALDIFPHSRLKQLLQDTASYTVSRL 333 >gi|262369367|ref|ZP_06062695.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046] gi|262315435|gb|EEY96474.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046] Length = 325 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 115/315 (36%), Positives = 183/315 (58%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVL 66 +D ++ I + I S V ++ V K+++ +GGKR+RP++ L A + Sbjct: 13 VAQDFATMDTFINEGITSKVALVMAVSKHVVEAGGKRMRPIMCLLAAKACGAEDLERQRK 72 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA IE +HTATL+HDDVVD+S LRRG+ A W NQT+VLVGDFL+S+AF ++++ Sbjct: 73 LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLISRAFDLLVDLGD 132 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ S C +AEGE+ QL + TE+ YL +I KT+ LF A E +++++G Sbjct: 133 MTLLKDFSTGTCEIAEGEVLQLQAQHQPETTEQTYLDIIHGKTSRLFELATEGAAILSG- 191 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 R+ L+ + + G AFQ++DD+LDY + +GKNIG+D GKPTLP+I A + T Sbjct: 192 TPQYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALKNTT 251 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 E + + +I G + +L + I+ + AL RA+ + A +L+ LPDS + Sbjct: 252 GEEHDIVRRSIATGGTA--DLDQVIAIVNSSGALDYCRQRAHEETEAALQALQALPDSQY 309 Query: 307 KKSLMEVVDFCLQRL 321 +++L+ + L R+ Sbjct: 310 RQALVNLTQLALHRI 324 >gi|310815063|ref|YP_003963027.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25] gi|308753798|gb|ADO41727.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25] Length = 325 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 139/310 (44%), Positives = 194/310 (62%), Gaps = 2/310 (0%) Query: 14 KVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIE 72 KVN + + SD I V +LI +GGKRLRPMLT+A A + Y G +H+ LA +E Sbjct: 17 KVNETLHSYMQSDAAPRIRQVSAHLIDAGGKRLRPMLTVAAARLCGYDGPHHIHLAATVE 76 Query: 73 FIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEA 132 FIHTATLLHDDVVDDS RRG+ A L+W N +SVLVGD+L S+AF ++ T S L A Sbjct: 77 FIHTATLLHDDVVDDSKQRRGRPTANLLWDNMSSVLVGDYLFSRAFQLMTITGSMPILAA 136 Query: 133 LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQ 192 L+ + T+AEGE+ QLS +++L T E Y+ + + KTA LFSAA V +++A +++ Q Sbjct: 137 LADASATIAEGEVLQLSTARDLSATPETYIRIARGKTAALFSAATRVGAMLAEPGDAIVQ 196 Query: 193 ALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNF 252 A+ YG LGIAFQ+ DD+LDY G + +GKN G+D R GK TLPVI A + E+ F Sbjct: 197 AMHDYGDALGIAFQIADDLLDYTG-TDAIGKNRGDDLREGKLTLPVIWALDKADAAERAF 255 Query: 253 WKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLME 312 W TI G + + A IM + +L+ T A + AK +L+ LP +++L E Sbjct: 256 WTRTIGKGDVQDGDFDAALSIMDKRGSLLATADEARRWAGLAKAALQALPPQPLRETLEE 315 Query: 313 VVDFCLQRLN 322 + D+ + RL+ Sbjct: 316 LADYVVARLS 325 >gi|149927152|ref|ZP_01915409.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Limnobacter sp. MED105] gi|149824091|gb|EDM83312.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Limnobacter sp. MED105] Length = 330 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 121/323 (37%), Positives = 184/323 (56%), Gaps = 5/323 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + DM++++ +I + S+V +I + Y+I +GGKRLRP L + TA L Sbjct: 8 VKSVLSPIAADMQQLDQVIRTSLHSEVSLINQISDYIINAGGKRLRPALVILTARALGAT 67 Query: 61 GDNHVL---LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 LA +EFIHTATLLHDDVVD+S +RRG++ A +GN +VLVGDFL S++ Sbjct: 68 QQQMQQTIELAAIVEFIHTATLLHDDVVDESDMRRGRLTANAEYGNSAAVLVGDFLYSRS 127 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 F M+++ + ++ LS T+AEGE+ QL K+ DVTE Y+ VI KTA LF A+ Sbjct: 128 FQMMVKIGLMDVMDVLSEATNTIAEGEVLQLLNCKDPDVTEARYMQVIDFKTAKLFEASC 187 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ ++ G L +G +G AFQL+DDVLDY GE +GKN+G+D R GKPTLP Sbjct: 188 RLAGIVTGQSKEAITNLGRFGAEVGSAFQLIDDVLDYAGESAALGKNVGDDLREGKPTLP 247 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 +I A Q + +N + I +G +++ + + +L T +A + AK Sbjct: 248 LIHAMQHAKPQVQNQIRDAIANG--GTQDVSVIMASIEQTGSLAYTRNKAQALADSAKTR 305 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L L + + ++L + D + R Sbjct: 306 LGSLTSNPYTEALAVLCDVAVNR 328 >gi|114798232|ref|YP_759407.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444] gi|114738406|gb|ABI76531.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444] Length = 337 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 137/319 (42%), Positives = 202/319 (63%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + ++ L D+ V L+ R S V +IPD+ Y++ +GGKRLRPM+TL A + Sbjct: 18 ERMQALVADDLAAVERLLATRAASPVAVIPDLSGYIVSAGGKRLRPMITLIAAHAVGKAN 77 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 LA A+EFIHTATLLHDDVVD+S LRRGK AA+ +WGN+ ++LVGDFL ++AF ++ Sbjct: 78 AATHALAAAVEFIHTATLLHDDVVDESDLRRGKPAAKAIWGNKAAILVGDFLFARAFNLL 137 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S + L L+ + +AEGE+RQL+ D+ E+YL ++++KT LF AA E + Sbjct: 138 VEANSLDILNRLATASTVIAEGEVRQLAAMATRDLPTEEYLAIVEAKTGALFEAAAETGA 197 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + AG AL +YG NLG+AFQ++DD LDY G + +GK++G+DFR GK TLPVI+A Sbjct: 198 MSAGG-EEYSDALATYGKNLGLAFQIIDDALDYGGTTSVIGKSVGDDFREGKITLPVIIA 256 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 +RG+ ++ FW +N +L A ++R A T A +Y AK +LR L Sbjct: 257 RRRGSDEDRAFWDRALNPETQEDSDLAHAVHLIRATGAAEATVQEAEAYAALAKGALRTL 316 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P S+++ +L ++ DFC+ R Sbjct: 317 PASTYRDALEDLADFCVSR 335 >gi|84515724|ref|ZP_01003085.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53] gi|84510166|gb|EAQ06622.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53] Length = 332 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 142/308 (46%), Positives = 200/308 (64%), Gaps = 2/308 (0%) Query: 15 VNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEF 73 VN +I R+ S+ IP V +L+ +GGKRLRPMLTLA A M Y G H+ LA +EF Sbjct: 25 VNAMIRDRMASEHAPRIPQVTAHLVEAGGKRLRPMLTLAAARMCGYDGPYHIHLAATVEF 84 Query: 74 IHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEAL 133 IHTATLLHDDVVD+S+ RRG+ A L+W N +SVLVGD+L +++F +++ET S L+ L Sbjct: 85 IHTATLLHDDVVDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDIL 144 Query: 134 SLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQA 193 + + T+AEGE+ QL+ + +L TE+ Y+ V++ KTA LFSAA+EV IAG +++QA Sbjct: 145 ANASATIAEGEVLQLTAAADLATTEDIYIKVVRGKTAALFSAAMEVGGEIAGQDPAIKQA 204 Query: 194 LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFW 253 L YG LGI+FQ+VDD+LDY G GKN+G+DFR K TLPVI A E+ FW Sbjct: 205 LFDYGDALGISFQIVDDLLDY-GGTKATGKNVGDDFRERKLTLPVIRAVAAADADERAFW 263 Query: 254 KSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEV 313 + TI G+ +L A ++ + L T A + KAK++L +PD + K L+++ Sbjct: 264 ERTIQKGRQQDGDLDHAIALLHRHGTLESTRQDAILWAAKAKEALGVIPDHALKTMLVDL 323 Query: 314 VDFCLQRL 321 D+ + RL Sbjct: 324 ADYVVARL 331 >gi|87199374|ref|YP_496631.1| farnesyltranstransferase [Novosphingobium aromaticivorans DSM 12444] gi|87135055|gb|ABD25797.1| Farnesyltranstransferase [Novosphingobium aromaticivorans DSM 12444] Length = 337 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 147/314 (46%), Positives = 206/314 (65%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L + M VN +IL R+ S + +IP + +LI GGKR+RPMLTLA+A +L Y G H Sbjct: 22 LVAEGMNSVNAVILDRMQSRIPLIPTLAGHLIAGGGKRMRPMLTLASAALLGYGGSRHYK 81 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA A+EFIHTATLLHDDVVD S +RRGK A +V+GN +VLVGDFL S++F +++E S Sbjct: 82 LAAAVEFIHTATLLHDDVVDGSDMRRGKKTANIVYGNPATVLVGDFLFSRSFELMVEDGS 141 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + L LS + ++EGE+ QL + +D TEE YL +I +KTA LFSAA +++++A Sbjct: 142 LKVLRILSNASAVISEGEVDQLVAQRQIDTTEEMYLDIIAAKTAALFSAACRIAAVVAER 201 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ AL +YG NLGIAFQL DD +DY + EMGK+ G+DFR GK TLPVILA+ RG Sbjct: 202 PDADELALDAYGRNLGIAFQLADDAIDYDSDAAEMGKDQGDDFREGKMTLPVILAYARGD 261 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + E+ FW+ I + S +L A ++R + A+ T RA Y Q+A D++ P S+ Sbjct: 262 EEERGFWQQAIAGERSSDADLAHAISLIRRHDAVHATRERARMYAQRAIDAISGFPASAA 321 Query: 307 KKSLMEVVDFCLQR 320 K ++ E +F + R Sbjct: 322 KAAMTEAAEFAVAR 335 >gi|307611532|emb|CBX01209.1| hypothetical protein LPW_29081 [Legionella pneumophila 130b] Length = 322 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 123/317 (38%), Positives = 198/317 (62%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+G + Sbjct: 6 IRALVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYKGKD 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +++E Sbjct: 66 HISLAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNLMVE 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA + ++ Sbjct: 126 VGIKEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIGPIL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I A Q Sbjct: 186 TNAPIEIRNSLYNYGLHLGNAFQLIDDALDYCSDATTLGKNIGDDLADGKATLPLIHALQ 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + ++ G +S +L I + + A+ T+ A A +L LPD Sbjct: 246 NGNATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALEILPD 303 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+++ F L+R Sbjct: 304 SVYKEALVDLAKFALER 320 >gi|238022826|ref|ZP_04603252.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147] gi|237866029|gb|EEP67165.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147] Length = 324 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 121/311 (38%), Positives = 190/311 (61%), Gaps = 2/311 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 D+ +VN +I + + S+V +I + Y+I +GGKRLRP+LT+ L D LA Sbjct: 15 DLSRVNVVINRAVQSEVALISQIGTYIISAGGKRLRPILTILAGKCLGCDSDKLYSLAAM 74 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF +++ + S + L Sbjct: 75 VEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVGSGSLKIL 134 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 E ++ +AEGE+ QL N +++E +YL VI+ KTA LF AA +V +++AG + Sbjct: 135 EVMAEATNIIAEGEVMQLMNIGNTEISETEYLQVIQYKTAKLFEAAAQVGAILAGATSGQ 194 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 QALK YG ++G AFQ++DDVLDY G V ++GKN+G+D GKPTLP+I ++G++ Sbjct: 195 EQALKDYGAHIGTAFQIIDDVLDYSGSVEQIGKNVGDDLAEGKPTLPLIYLMRQGSEEAA 254 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 + + S + + ++ AL +A KA +L+ LP++ ++ Sbjct: 255 RDVRHALQHADRS--YFETIHNHVMQSGALDYCVQQARHAADKAILALQMLPENEVTHAM 312 Query: 311 MEVVDFCLQRL 321 E+ + L R+ Sbjct: 313 RELAEQSLSRI 323 >gi|294339015|emb|CAZ87362.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Thiomonas sp. 3As] Length = 336 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 121/314 (38%), Positives = 186/314 (59%), Gaps = 2/314 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DME+V+ I + S+V +I + Y++ GGKRLRP L L + L +RG ++ Sbjct: 24 ITEDMERVDRAIHTHLASEVALINTIGGYIVAGGGKRLRPALLLLVSQALGFRGPQQHIM 83 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +E IHTATLLHDDVVD+S++RRG+ + ++GN SVLVGDFL S+AF M++ S Sbjct: 84 AAVVELIHTATLLHDDVVDESSMRRGRETSNALFGNSASVLVGDFLYSRAFQMMVSVGSM 143 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L+ L+ +AEGE+ QL + +V E+ YL VI+ KTA LF AA + +++A Sbjct: 144 RILDILADATNVIAEGEVLQLLNMHDPEVDEQRYLQVIRFKTAKLFEAAARIGAVLADAD 203 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + ++ + G + G AFQL+DD+LDY G E+GKNIG+D R GKPTLP+I+A ++GT Sbjct: 204 ANTQEEMALAGRSFGTAFQLIDDLLDYSGNSAELGKNIGDDLREGKPTLPLIIAMRQGTA 263 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ ++ I G S L I+ A+ A + A+ +L L S + Sbjct: 264 AQRTLIENAIRQGDTS--ALDDVMDIVHACGAMQAVRKAAQGEIRVAECALSPLAPSPAR 321 Query: 308 KSLMEVVDFCLQRL 321 ++L+++ + L R Sbjct: 322 QALLDLCAYSLGRT 335 >gi|54295495|ref|YP_127910.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens] gi|148358609|ref|YP_001249816.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str. Corby] gi|53755327|emb|CAH16823.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens] gi|148280382|gb|ABQ54470.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str. Corby] Length = 322 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 123/317 (38%), Positives = 198/317 (62%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+G + Sbjct: 6 IRALVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYKGKD 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +++E Sbjct: 66 HISLAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNLMVE 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA + ++ Sbjct: 126 VGIKEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIGPIL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I A Q Sbjct: 186 TNAPIEIRNSLYNYGLHLGNAFQLIDDALDYCSDAATLGKNIGDDLADGKATLPLIHALQ 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + ++ G +S +L I + + A+ T+ A A +L LPD Sbjct: 246 NGNATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALEILPD 303 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+++ F L+R Sbjct: 304 SVYKEALVDLAKFALER 320 >gi|110680572|ref|YP_683579.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114] gi|109456688|gb|ABG32893.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114] Length = 333 Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 148/313 (47%), Positives = 207/313 (66%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM V+ LI +R+ S IP+V +L+ +GGKRLRPMLTLA A + Y G H+ LA Sbjct: 21 DMAAVSTLIRERMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYDGPFHINLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +++ET S Sbjct: 81 TVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ + T+AEGE+ QL+ S+NL TEE YL V++ KTA LFSAA EV +IAG + Sbjct: 141 LDILANASATIAEGEVLQLTASQNLATTEEVYLQVVRGKTAALFSAATEVGGVIAGAPDD 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL YG LGIAFQ+VDD+LD++G+ +GKNIG+DFR K T+P+I A + E Sbjct: 201 HVAALFEYGDALGIAFQIVDDLLDFQGDAGAIGKNIGDDFRERKLTMPLIKAVAKADAEE 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI GK +L+ A ++ ++ AL DT A + +AK +L LP K Sbjct: 261 RAFWVRTIEKGKQEEGDLQHAIALLHKHAALTDTSVVARTQAARAKAALAPLPAHPVKDM 320 Query: 310 LMEVVDFCLQRLN 322 L+++ D+ ++R+N Sbjct: 321 LVDLADYVVERIN 333 >gi|329113331|ref|ZP_08242112.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001] gi|326697156|gb|EGE48816.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001] Length = 356 Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 138/324 (42%), Positives = 196/324 (60%), Gaps = 4/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L D DM N +I+ R+ S V +IP + +L+ +GGKRLRP+LTLA A M Y Sbjct: 31 LKALADYLASDMLACNQVIVDRMQSPVALIPQLAAHLVAAGGKRLRPLLTLAAARMCGYN 90 Query: 61 GDN----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + HV +A +EFIHTATLLHDDVVDDS LRRG +A ++GN+ SVLVGDFL ++ Sbjct: 91 NQDGRMRHVEIAACVEFIHTATLLHDDVVDDSQLRRGLASANAIFGNKASVLVGDFLFAR 150 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 +F ++ S + LS + TLAEGE+ Q++ +L + + YL VI KTA LF+AA Sbjct: 151 SFQILTADASLGVMAILSAASATLAEGEVMQMTTQNDLSTSVDQYLQVIYGKTAALFAAA 210 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 E ++I R+AL+ YG NLG+AFQLVDD LDY + +GK +G+DFR GK TL Sbjct: 211 CESGAVIGEATPEQREALRMYGANLGMAFQLVDDALDYAADQATLGKEVGDDFREGKVTL 270 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 PV+ A++ G + ++ FW+ I + +L+ A + E A+ T A Y KA++ Sbjct: 271 PVLAAYEAGNEEDRIFWRRVIEECDQHPGDLEAALGRIAETNAIGITLKCAEDYAAKARE 330 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L PD + K L+E + R Sbjct: 331 NLSMFPDDTLKNLLLETASYSASR 354 >gi|315498623|ref|YP_004087427.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48] gi|315416635|gb|ADU13276.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48] Length = 343 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 145/321 (45%), Positives = 212/321 (66%), Gaps = 1/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L L DM VN +I +R+ SDV +IP + ++L+ +GGKRLRP+L +A A + Sbjct: 23 VEALVRLCADDMAAVNAIITERMQSDVAVIPALAEHLVSAGGKRLRPLLCVAAARVAGTT 82 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 +H L+ A+EFIHTATLLHDDVVD S LRRGKVAA L+WG +SVLVGDFL ++AF + Sbjct: 83 NLHHRKLSAAVEFIHTATLLHDDVVDSSQLRRGKVAAHLIWGAPSSVLVGDFLFARAFEL 142 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET S +AL LS + +AEGE+ QL + ++++TE Y+ +I +KTAVLF+AA E Sbjct: 143 MVETDSLQALGILSKASGVIAEGEVLQLMKAYDVNLTEATYIDIIAAKTAVLFAAAAESG 202 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AG ++ +QAL+ YG+NLG+AFQ+ DD LDY G +GKN G+DF GK TLP+IL Sbjct: 203 AVAAGASSAGQQALRDYGLNLGLAFQIQDDALDYGGTTQSLGKNAGDDFAEGKATLPLIL 262 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T FW T++ + +L +A ++ E+ A+ T A Y QKAKD+L+ Sbjct: 263 AV-KATPEAAAFWHRTVSLRDQTDGDLAQAQALIVESGAMAKTMETARHYAQKAKDALKG 321 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 S W+ +L + D+ ++R Sbjct: 322 FEPSDWRTALEALADYSVERT 342 >gi|162147610|ref|YP_001602071.1| octaprenyl-diphosphate synthase [Gluconacetobacter diazotrophicus PAl 5] gi|209542242|ref|YP_002274471.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161786187|emb|CAP55769.1| putative octaprenyl-diphosphate synthase [Gluconacetobacter diazotrophicus PAl 5] gi|209529919|gb|ACI49856.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 358 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 139/324 (42%), Positives = 203/324 (62%), Gaps = 4/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L D DM N I++R+ S V +IP + +L+ +GGKRLRP+LTLA A + +Y Sbjct: 33 LRDLSDYLGDDMAACNRAIVERMDSPVALIPQLAAHLVAAGGKRLRPLLTLAAARLCDYP 92 Query: 61 G----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 HV LA +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL ++ Sbjct: 93 AGPEHQRHVSLAACVEFIHTATLLHDDVVDESLLRRGLASANAVFGNKASVLVGDFLFAR 152 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 +F ++ + S + + LS + T+AEGE+ Q+S +L + E YL VI KTA LF+AA Sbjct: 153 SFQLMTDDGSLKVMAILSSASATIAEGEVLQMSTQNDLSTSVEQYLEVIHGKTAALFAAA 212 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 V +++A + AL+S+G NLG+AFQLVDD LDY + +GK +G+DFR GK TL Sbjct: 213 CRVGAVVAERPEAEELALESFGTNLGMAFQLVDDALDYAADQAVLGKTVGDDFREGKITL 272 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 PV+ A+ G + E+ FW+ I + + E+L +A ++ + A+ T RA Y Q A+D Sbjct: 273 PVLAAYAAGDEEERVFWRRVIEQSEQAPEDLDRALALIAKTDAIGVTLDRAALYAQAARD 332 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L PDS ++ L + + + R Sbjct: 333 ALEIFPDSRLRRLLQDTAAYTVSR 356 >gi|52842862|ref|YP_096661.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629973|gb|AAU28714.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 322 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 123/317 (38%), Positives = 198/317 (62%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+G + Sbjct: 6 IRALVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYKGKD 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +++E Sbjct: 66 HISLAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNLMVE 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA + ++ Sbjct: 126 VGIKEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIGPIL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I A Q Sbjct: 186 TNAPIELRNSLYNYGLHLGNAFQLIDDALDYCSDAATLGKNIGDDLADGKATLPLIHALQ 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + ++ G +S +L I + + A+ T+ A A +L LPD Sbjct: 246 NGNATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALEILPD 303 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+++ F L+R Sbjct: 304 SVYKEALVDLAKFALER 320 >gi|116622453|ref|YP_824609.1| geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076] gi|116225615|gb|ABJ84324.1| Geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076] Length = 333 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 104/317 (32%), Positives = 174/317 (54%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + DL D+E+V I + V+ + + +YL +GGKRLRP L L +A ++ G + Sbjct: 15 IFDLIQDDLEQVEKKITAESVASVDAVTAIGQYLQSAGGKRLRPALLLLSAKLVGNGGPS 74 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + L +E IH ATL+HDDV+D + RRG+ + + WGN T VL GD+L QAF + + Sbjct: 75 AIQLGAVVELIHAATLVHDDVIDTAQTRRGRPSTNVKWGNHTCVLAGDWLYMQAFQIALR 134 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +S + L+ L + + EGEL QL ++V+E D + ++ KTA LFS + L Sbjct: 135 ERSFQMLDLLIGLTQMMVEGELLQLERIGRINVSEADCMELVDRKTACLFSVCARLGGLC 194 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 ++ L Y NLG+AFQLVDDVLD+ +GK +G D R GK TLP++ A + Sbjct: 195 GHTDPQTQEKLGEYAWNLGMAFQLVDDVLDFTSREKVLGKPVGGDLREGKVTLPLVYALE 254 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 R E+ ++ + D ++ ++ + + + + RA ++ KA+ ++ P+ Sbjct: 255 RAAPEERKLVETILEDRTYDRVPFQRILALLEKYQGIERVKERAQAFTDKARQTIAEFPE 314 Query: 304 SSWKKSLMEVVDFCLQR 320 S ++++L+ V + +R Sbjct: 315 SPYQRALLAVTELVTER 331 >gi|254439584|ref|ZP_05053078.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] gi|198255030|gb|EDY79344.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] Length = 332 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 146/319 (45%), Positives = 204/319 (63%), Gaps = 2/319 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L +M+ VN LI R+ S IP+V +L+ +GGKRLRPMLTLA A M Y G Sbjct: 14 LAAALSDEMDAVNVLITDRMASKHAPRIPEVTAHLVGAGGKRLRPMLTLAAAKMCGYSGP 73 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W N +SVLVGD+L +++F +++ Sbjct: 74 YHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMV 133 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 ET S L+ L+ + T+AEGE+ QL+ + +L TE YL +++ KTA LFSAA+EV + Sbjct: 134 ETGSLRVLDILANASATIAEGEVLQLTAASDLATTEAIYLQIVRGKTAALFSAAMEVGGV 193 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 IAG ++ +AL YG LGI FQ+VDD+LDY G + +GKNIG+DFR K TLPVI A Sbjct: 194 IAGQDAALVEALYDYGDALGIGFQIVDDLLDYAG-TDAIGKNIGDDFRERKLTLPVIKAV 252 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 E+ FW TI G+ +L A ++ ++ L T+ A ++ +KAK +L LP Sbjct: 253 ALADVEERAFWVRTIEKGRQEDGDLDAALGLLVKHGTLDATKSEALAWMEKAKAALAPLP 312 Query: 303 DSSWKKSLMEVVDFCLQRL 321 D K L+++ + + R+ Sbjct: 313 DHPIKPMLLDLAGYVVARV 331 >gi|114327555|ref|YP_744712.1| decaprenyl diphosphate synthase [Granulibacter bethesdensis CGDNIH1] gi|114315729|gb|ABI61789.1| farnesyl pyrophosphate synthetase [Granulibacter bethesdensis CGDNIH1] Length = 353 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 142/323 (43%), Positives = 202/323 (62%), Gaps = 6/323 (1%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-- 61 L L D+ N I+ R+ S V +IP + +++ +GGKRLRP+LTLA+A + + Sbjct: 29 LIALVQDDLTLCNQAIIDRMDSQVPLIPQLAAHIVAAGGKRLRPLLTLASARLCGFDTAL 88 Query: 62 ----DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 HV LA +EFIHTATLLHDDVVD+S +RRG +A V+GN SVLVGDFL ++A Sbjct: 89 AGGVPRHVHLAACVEFIHTATLLHDDVVDESRMRRGMASANAVFGNNASVLVGDFLFARA 148 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 F +++E S + L LS A T+AEGE+ QL+ +L+ E YL VI+ KTA LF+AA Sbjct: 149 FQLMVEDGSLQVLAILSKAAATIAEGEVLQLATQNDLETPESRYLEVIEGKTASLFAAAC 208 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 +V +++A QAL YGM+LGIAFQL DD LDY + ++GK +G+DFR GK TLP Sbjct: 209 QVGAVVAARPAEEEQALYDYGMSLGIAFQLTDDALDYAADQRKLGKTVGDDFREGKITLP 268 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 V+ AF G EK FW+ TI + + ++L++A ++ + + T RA +KAK + Sbjct: 269 VLAAFHAGDAEEKRFWQRTIGESDQTEDDLEEALRLIARHDTIGLTLERARIMAEKAKRA 328 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L PD+ ++SL V D+ + R Sbjct: 329 LDIFPDTPLRRSLCAVADYTVWR 351 >gi|85708095|ref|ZP_01039161.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1] gi|85689629|gb|EAQ29632.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1] Length = 336 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 146/304 (48%), Positives = 206/304 (67%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + LT M VN +IL+R+ S++ +IP + +LI GGKRLRPMLTLA A ++ Y Sbjct: 15 LEPMLSLTANGMNSVNSVILERMQSEIPLIPRLAGHLISGGGKRLRPMLTLAGAALVGYE 74 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA A+EFIHTATLLHDDVVD S LRRGK AA +V+GN +VLVGDFL S+AF + Sbjct: 75 GTRHHKLAAAVEFIHTATLLHDDVVDGSELRRGKAAANIVFGNPATVLVGDFLFSRAFEL 134 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S L+ LS + +AEGE+ QL+ + ++ +EE YLH+I +KTA LF+AA ++S Sbjct: 135 MTEDGSLRVLKILSHASAVIAEGEVSQLTAQRQIETSEERYLHIIGAKTAALFAAASQIS 194 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++A + +AL+ YG NLG+AFQLVDD +DY + +MGK+ G+DFR GK TLPVIL Sbjct: 195 AVVAECSDEEERALEDYGRNLGVAFQLVDDAIDYDSDAAQMGKDQGDDFREGKMTLPVIL 254 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A RG + E+ FWK I + S E+ +A ++ ++ AL DT +A + Q+A D++ Sbjct: 255 AHARGDEAERKFWKDAILGHRSSDEDFAEAIRLIEKHNALEDTREKARHFAQRAIDAISI 314 Query: 301 LPDS 304 DS Sbjct: 315 FADS 318 >gi|258542159|ref|YP_003187592.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256633237|dbj|BAH99212.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256636296|dbj|BAI02265.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-03] gi|256639349|dbj|BAI05311.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-07] gi|256642405|dbj|BAI08360.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-22] gi|256645460|dbj|BAI11408.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-26] gi|256648513|dbj|BAI14454.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-32] gi|256651566|dbj|BAI17500.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654557|dbj|BAI20484.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-12] Length = 356 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 138/324 (42%), Positives = 195/324 (60%), Gaps = 4/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K L D DM N +I+ R+ S V +IP + +L+ +GGKRLRP+LTLA A M Y Sbjct: 31 LKALADYLASDMLACNQVIVDRMQSPVALIPQLAAHLVAAGGKRLRPLLTLAAARMCGYN 90 Query: 61 GDN----HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + HV +A +EFIHTATLLHDDVVDDS LRRG +A ++GN+ SVLVGDFL ++ Sbjct: 91 NQDGRMRHVEIAACVEFIHTATLLHDDVVDDSQLRRGLASANAIFGNKASVLVGDFLFAR 150 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 +F ++ S + LS + TLAEGE+ Q++ +L + E YL VI KTA LF+AA Sbjct: 151 SFQILTADASLGVMAILSAASATLAEGEVMQMTTQNDLSTSVEQYLQVIYGKTAALFAAA 210 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 E ++I R+AL+ YG NLG+AFQLVDD LDY + +GK +G+DFR GK TL Sbjct: 211 CESGAVIGEATPEQREALRMYGANLGMAFQLVDDALDYAADQATLGKEVGDDFREGKVTL 270 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 PV+ A+ G + ++ FW+ I + +L+ A + + A+ T A Y KA++ Sbjct: 271 PVLAAYDAGDEEDRIFWRRVIEECDQHPGDLEAALDRIAKTNAIGITLKCAEDYAAKARE 330 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L PD + K L+E + R Sbjct: 331 NLSMFPDDTLKNLLLETASYSASR 354 >gi|311109204|ref|YP_003982057.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans A8] gi|310763893|gb|ADP19342.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans A8] Length = 308 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 129/309 (41%), Positives = 183/309 (59%), Gaps = 3/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+ V+ +I +R+ S+V +I + Y+I +GGKR+RP + L A L Y G +H LLA + Sbjct: 1 MKAVDAVIRERLNSEVVLIRTIGDYIIGAGGKRMRPAMVLMVARALGYEGTHHQLLAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M++E S + Sbjct: 61 EFIHTATLLHDDVVDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEMMVEANSMRVMS 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS +AEGE+ QL + DV++E YL V++ KTA LF AA +V +++AG Sbjct: 121 ILSEATTVIAEGEVLQLLNVHDPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGATPEQE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 A +YG ++G AFQLVDDVLDY G+ +GKN+G+D R GKPTLP+I + GT ++ Sbjct: 181 AAAAAYGRHVGTAFQLVDDVLDYSGDAAALGKNVGDDLREGKPTLPLIRVMEVGTPEQQQ 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G ++ AL A + A+ +L P S + SL+ Sbjct: 241 LIRDAIKTGDADF---AAVAAAIQATDALEHARQAAVAEADLARQALSGYPISPFLNSLL 297 Query: 312 EVVDFCLQR 320 E F + R Sbjct: 298 EFCAFAVNR 306 >gi|163858994|ref|YP_001633292.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM 12804] gi|163262722|emb|CAP45025.1| putative octaprenyl-diphosphate synthase [Bordetella petrii] Length = 308 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 129/309 (41%), Positives = 192/309 (62%), Gaps = 3/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+ V+ +I R+ S+V +I + Y+I +GGKR+RP + L A L Y+G++H LLA + Sbjct: 1 MKAVDAVIRGRLDSEVVLIRTIADYIIGAGGKRMRPAMVLMMARALGYQGEHHRLLAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++E S ++ Sbjct: 61 EFIHTATLLHDDVVDESDLRRGRETANAMFGNAASVLVGDYLYSRSFEMMVEAGSMRIMQ 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS +AEGE+ QL + DV++ YL V++ KTA LF AA +V +++AG Sbjct: 121 ILSEATTIIAEGEVLQLLNVHDPDVSQARYLQVVRYKTAKLFEAAAQVGAVLAGASPEQE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A +YG ++G AFQLVDDVLDY G+ +GKN+G+D R GKPTLP+I + G +++ Sbjct: 181 EAAAAYGRHIGTAFQLVDDVLDYSGDAQALGKNVGDDLREGKPTLPLIRVMETGAPQQRE 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 ++ I G + +A ++ AL A + A+ +L LP S ++KSL+ Sbjct: 241 LIRNAIKTGDADFAAVAQA---IQATDALEHARQAALAEADAARQALAGLPISVYQKSLL 297 Query: 312 EVVDFCLQR 320 E F + R Sbjct: 298 EFCAFAVNR 306 >gi|325919582|ref|ZP_08181594.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC 19865] gi|325549918|gb|EGD20760.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC 19865] Length = 358 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 124/322 (38%), Positives = 179/322 (55%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 39 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 98 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA +EFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 99 GPEHHQLAAIVEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 158 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 159 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 218 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I Sbjct: 219 ALASGADAHVQQRLYDYGMQLGFAFQIADDVLDYAADATDLGKNLGDDLAEGKATLPLIH 278 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + L + RA Y A+ +L Sbjct: 279 AMAHSDATTRERLRQIVEQGDAG--AMPEVLAAIHATGGLDYSRQRAAEYAAAAEQALDG 336 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 337 LPASPAVAALRGLARYAVERTH 358 >gi|296108301|ref|YP_003620002.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila 2300/99 Alcoy] gi|295650203|gb|ADG26050.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila 2300/99 Alcoy] Length = 322 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 123/317 (38%), Positives = 198/317 (62%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + L +D VN LI+ +I S V +I D+ ++++ SGGKRLRP++ L + Y+G + Sbjct: 6 IRALVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVESGGKRLRPLVVLLASNACGYKGKD 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA +EF HTATLLHDDV+D+S LRRG+ A +WG++ SVLVGD+L +Q+ +++E Sbjct: 66 HISLAAMVEFFHTATLLHDDVIDESTLRRGRQTANSIWGSKASVLVGDYLFTQSVNLMVE 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 +E L L+ + + GE++QL+ N +T +DY VI++KTA+LF+AA + ++ Sbjct: 126 VGIKEILNLLANTSHQITCGEVKQLANRHNPALTLDDYFDVIRAKTALLFAAAACIGPIL 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +R +L +YG++LG AFQL+DD LDY + +GKNIG+D +GK TLP+I A Q Sbjct: 186 TNAPIEIRDSLYNYGLHLGNAFQLIDDALDYCSDAATLGKNIGDDLADGKATLPLIHALQ 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G ++ + ++ G +S +L I + + A+ T+ A A +L LPD Sbjct: 246 NGNATQQQQIRESLMKGSLS--HLPDILIAIEQTEAIPFTKRIAAQEVDSALSALGILPD 303 Query: 304 SSWKKSLMEVVDFCLQR 320 S +K++L+++ F L+R Sbjct: 304 SVYKEALVDLAKFALER 320 >gi|3410887|dbj|BAA32241.1| decaprenyl diphosphate synthase [Gluconobacter oxydans] Length = 315 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 133/313 (42%), Positives = 196/313 (62%), Gaps = 4/313 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY----RGDNHVLL 67 M N I+ R+ S V +IP + +L+ +GGKRLRP+LTLA+A + Y HV L Sbjct: 1 MLACNRAIIARMESPVPLIPQLGAHLVAAGGKRLRPLLTLASARLCGYQPGPDHQRHVGL 60 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL +++F ++ S Sbjct: 61 AACVEFIHTATLLHDDVVDESTLRRGLASANAVFGNKASVLVGDFLFARSFQLMTADGSL 120 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + + LS + T+AEGE+ Q+ + +L E YL VI KTA LF+AA V +++A Sbjct: 121 KVMAILSDASATIAEGEVLQMVVQNDLTTPVERYLEVIHGKTAALFAAACRVGAVVAERP 180 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + +AL+ +G NLG+AFQLVDD LDY + +GK +G+D R GK TLPV+ A++ G+ Sbjct: 181 EAEEEALERFGTNLGMAFQLVDDALDYAADQQVLGKTVGDDMREGKITLPVLAAYEAGSP 240 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ FW+ I +G+ + ++L A ++ + A+ T RA Y A ++L PDS + Sbjct: 241 EDRIFWERVIGEGEQTEDDLPHALNLIAKTGAINTTIARAQVYADAAVEALSIFPDSELR 300 Query: 308 KSLMEVVDFCLQR 320 + L+E V F + R Sbjct: 301 RLLIETVQFTVNR 313 >gi|291287109|ref|YP_003503925.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM 12809] gi|290884269|gb|ADD67969.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM 12809] Length = 324 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 120/315 (38%), Positives = 184/315 (58%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 L + E V ++ + SDVEM+ V +Y+ SGGKRLRP+ + +ALM Y G+ + Sbjct: 8 KLVENEREAVEKNLIDNLDSDVEMVNKVAEYIFESGGKRLRPVFMILSALMCGYDGERTI 67 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA +E+IHTATLLHDDV+D + RRGK +A V+GN +VL GDFL S+AF +++ Sbjct: 68 NLAGVVEYIHTATLLHDDVIDGAKYRRGKESANNVFGNDITVLCGDFLYSRAFMNLVKDG 127 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 A L++ A T++EGE+ QL + ++ +T +DYL +I SKTAV+F+ E+ +++ Sbjct: 128 DSRAQMLLAVAARTMSEGEVFQLIKTADVKITMDDYLRIINSKTAVMFATCCEIGAILGE 187 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + ++AL +G LGIAFQ+ DD+LDY G+ + GK G D + GK TLP+I Sbjct: 188 MPVEKQKALADFGKTLGIAFQMADDILDYLGDPEKTGKKPGTDLKEGKITLPIITLLANA 247 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + EK ++ I D + S ENL +M +E Y Q+AK +L S Sbjct: 248 AEEEKKRVRNIIVDERSSEENLNYILDLMNTYDVKAKSELVVDKYIQEAKANLNLFEKSK 307 Query: 306 WKKSLMEVVDFCLQR 320 ++ +L + D+ + R Sbjct: 308 YRDALDFLADYMVAR 322 >gi|296134998|ref|YP_003642240.1| Polyprenyl synthetase [Thiomonas intermedia K12] gi|295795120|gb|ADG29910.1| Polyprenyl synthetase [Thiomonas intermedia K12] Length = 326 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 121/314 (38%), Positives = 184/314 (58%), Gaps = 2/314 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DME V+ I + S+V +I + Y++ GGKRLRP L L + L +RG ++ Sbjct: 14 ITEDMESVDRAIHTHLASEVALINTIGGYIVAGGGKRLRPALLLLVSQALGFRGPQQHIM 73 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +E IHTATLLHDDVVD+S++RRG+ + ++GN SVLVGDFL S+AF M++ S Sbjct: 74 AAVVELIHTATLLHDDVVDESSMRRGRETSNALFGNSASVLVGDFLYSRAFQMMVSVGSM 133 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L L+ +AEGE+ QL + +V E+ YL VI+ KTA LF AA + +++A Sbjct: 134 RILNILADATNVIAEGEVLQLLNMHDPEVDEQRYLQVIRFKTAKLFEAAARIGAVLADAD 193 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + ++ + G + G AFQL+DD+LDY G E+GKNIG+D R GKPTLP+I+A ++GT Sbjct: 194 ANTQEEMALAGRSFGTAFQLIDDLLDYSGNSAELGKNIGDDLREGKPTLPLIIAMRQGTA 253 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ ++ I G S L I+ A+ A + A+ +L L S + Sbjct: 254 AQRTLIENAIRQGDTS--ALDDVMDIVHACGAMQAVRKAAQGEIRVAERALSPLAPSPAR 311 Query: 308 KSLMEVVDFCLQRL 321 ++L+++ + L R Sbjct: 312 QALLDLCAYSLGRT 325 >gi|330448814|ref|ZP_08312461.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328493005|dbj|GAA06958.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 323 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 131/319 (41%), Positives = 191/319 (59%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM +V+ I ++ SDV +I + Y++ SGGKRLRPML + A L Y G Sbjct: 4 KAIQALTANDMAQVDAKIQAQLNSDVALINQLGFYIVSSGGKRLRPMLAVLAARALGYDG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + H A +EFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 64 EKHTTAAAFVEFIHTATLLHDDVVDESDMRRGKETANAAFGNAASVLVGDYIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +S + L+ +S +AEGE+ QL + D TE+ Y+ VI SKTA LF A+ ++++ Sbjct: 124 TSLRSLKILDIMSEATNVIAEGEVLQLMNCNDPDTTEDSYMQVIYSKTARLFEASTQIAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IA + A + YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A Sbjct: 184 IIADAPAEIELAFQEYGRYLGTAFQLIDDVLDYIADGKEMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G + + I +E L M E+ +L T+ RA +KA +L + Sbjct: 244 MHHGNAEQTAMIREAIEKAN-GMEKLDAILACMHEHGSLEYTQKRAEEEAEKAIAALAPI 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 DS +K++L+ + +QR Sbjct: 303 ADSDYKEALIALAHMAVQR 321 >gi|294626299|ref|ZP_06704902.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666655|ref|ZP_06731892.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599445|gb|EFF43579.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603561|gb|EFF46975.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 332 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 126/322 (39%), Positives = 181/322 (56%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E +++GKN+G+D GK TLP+I Sbjct: 193 ALASGASEQVQQQLYDYGMQLGFAFQIADDVLDYAAEASDLGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + + L + RA Y A+ +L Sbjct: 253 AMAHSDATTRERLRQIVEQGDAA--AMPEVLAAIHATGGLDYSRQRAAEYAAAAEQALET 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 311 LPHSPAVAALRGLARYAVERTH 332 >gi|148244492|ref|YP_001219186.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius okutanii HA] gi|146326319|dbj|BAF61462.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius okutanii HA] Length = 323 Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 195/320 (60%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L D++K + +++ R+ S+V +I + Y+I +GGKRLRP+L L A Y+ Sbjct: 4 LSDIQSLIKLDLKKTDEILINRLSSNVALINQMSHYIIHAGGKRLRPLLLLLCARATGYQ 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H L+A IE IHTATLLHDD+VD+S+ RRGK VWGN S+LVGDFL S+AF + Sbjct: 64 GTHHYLMAVVIELIHTATLLHDDIVDESSTRRGKDTVNEVWGNAPSILVGDFLYSRAFEI 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + LS +AEGE+ QL +N ++TE +Y VIK KTA LF AA ++ Sbjct: 124 MVEPNLMSIMCILSKTTNNIAEGEVLQLLNCQNDELTEVEYYAVIKQKTACLFQAATQIG 183 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L++ V + ALK+YG++LG AFQ++DDVLDY + +GK +G+D GK TLP+I Sbjct: 184 GLLSAVNKTQETALKNYGLHLGNAFQIIDDVLDYESDAKTIGKEVGDDLSEGKTTLPMIY 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + +K K IN S + + I++ +A T +AY Q AK SL Sbjct: 244 ALSHTSGNDKQLLKDAINQADNS--KIVQVIKILQSVKAFDYTRNQAYKSAQLAKQSLNL 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +P+S +K +L+ + D LQR Sbjct: 302 IPNSEYKDALILLCDLSLQR 321 >gi|330815463|ref|YP_004359168.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3] gi|327367856|gb|AEA59212.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3] Length = 332 Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 127/315 (40%), Positives = 179/315 (56%), Gaps = 2/315 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 + DME+VN +I + SDV +I + +Y+I +GGKRLRP L L A L + L Sbjct: 20 IVDDMEQVNRVIRHSLSSDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGDGSSHRHTL 79 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 80 AAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 139 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 140 RVMEILSEATTIISEGEVLQLLNMHDADVDESRYMQVIRYKTAKLFEASARLGAVLAGAD 199 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 S A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I + GT Sbjct: 200 ASTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIHLLEHGTP 259 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G + + F + + AL T A Q A D++ P S +K Sbjct: 260 EQQALAREAIEQG--GTDRFETIFEAITRSGALDHTLECARQEAQAAADAIFSFPSSIFK 317 Query: 308 KSLMEVVDFCLQRLN 322 SL+E+ + R + Sbjct: 318 NSLLELCSYSTTRKS 332 >gi|163732321|ref|ZP_02139767.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149] gi|161394619|gb|EDQ18942.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149] Length = 333 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 149/313 (47%), Positives = 208/313 (66%), Gaps = 1/313 (0%) Query: 11 DMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69 DM VN LI +R+ S IP+V +L+ +GGKRLRPMLTLATA + Y G H+ LA Sbjct: 21 DMAAVNTLIRERMASKHAPRIPEVTAHLVDAGGKRLRPMLTLATAHLCGYDGPFHINLAA 80 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L S++F +++ET S Sbjct: 81 TVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRV 140 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 L+ L+ + T+AEGE+ QL+ S+NL TEE YL V++ KTA LFSAA EV +IAG + Sbjct: 141 LDILANASATIAEGEVLQLTASQNLATTEEIYLQVVRGKTAALFSAATEVGGVIAGAPDD 200 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 AL YG LG+AFQ+VDD+LD++G+ +GKNIG+DFR K T+P+I A + E Sbjct: 201 QVAALFEYGDALGVAFQIVDDLLDFQGDAGAIGKNIGDDFRERKLTMPLIKAVAKADAEE 260 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 + FW TI GK +L+ A ++ ++ AL DT A + +AK +L LP K Sbjct: 261 RAFWVRTIEKGKQEESDLQHAIDLLHKHAALFDTSVVARAEAARAKAALAPLPAHPVKDM 320 Query: 310 LMEVVDFCLQRLN 322 L+++ D+ ++R+N Sbjct: 321 LVDLADYVVERIN 333 >gi|330994653|ref|ZP_08318576.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1] gi|329758294|gb|EGG74815.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1] Length = 334 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 136/325 (41%), Positives = 203/325 (62%), Gaps = 4/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ L + DM N I++R+ S V +IP + +L+ +GGKRLRP+LTLA+A + Y+ Sbjct: 9 LRDLAEYLADDMAACNRAIVERMDSPVALIPQLAAHLVAAGGKRLRPLLTLASARLCGYQ 68 Query: 61 GD----NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 D HV LA +EFIHTATLLHDDVVD+S+LRRG +A V+GN+ SVLVGDFL ++ Sbjct: 69 PDATHQRHVGLAACVEFIHTATLLHDDVVDESSLRRGMASANAVFGNKASVLVGDFLFAR 128 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 +F ++ + S + + LS + T+AEGE+ Q+S +L + YL VI KTA LF+AA Sbjct: 129 SFQLMTDDGSLKVMNILSSASATIAEGEVLQMSTQNDLSTRIDQYLEVIHGKTAALFAAA 188 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 V +++A +V +AL+SYG NLG+AFQLVDD LDY + +GK +G+DFR GK TL Sbjct: 189 CRVGAVVAERDETVERALESYGTNLGMAFQLVDDALDYAADQARLGKTVGDDFREGKITL 248 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 PV+ A+ G++ ++ FW+ I + E+L A ++ A+ T RA Y A++ Sbjct: 249 PVLAAYAAGSEEDRAFWQRVIERSEQQPEDLDHALQLIARTDAIRITLDRATEYADAARE 308 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321 +L P ++ L + + + RL Sbjct: 309 ALSIFPPGHLRQLLQDTASYTVSRL 333 >gi|94312038|ref|YP_585248.1| polyprenyl synthetase [Cupriavidus metallidurans CH34] gi|93355890|gb|ABF09979.1| octaprenyl diphosphate synthase [Cupriavidus metallidurans CH34] Length = 325 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 132/313 (42%), Positives = 190/313 (60%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L +A +Y G H L Sbjct: 13 VAADMRAVDAVIRRRLSSEVPLIEQIGEYIIGAGGKRLRPVILLLSARAFDYEGHRHHEL 72 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M++E S Sbjct: 73 AAVVEFIHTATLLHDDVVDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMVEAGSM 132 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS +AEGE+ QL + +VT E YL VI+ KTA LF A+ ++ +++AG Sbjct: 133 RIMEILSNATNVIAEGEVLQLLNMHDPEVTVERYLQVIRYKTAKLFEASAQLGAVLAGAD 192 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++ + GT Sbjct: 193 AEMEEAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLLEHGTA 252 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 +++ + I G E+ F + + AL T A + A+ + PDS K Sbjct: 253 QQRELARDAIVQG--GTEHFDAVFSAIHASGALDVTFAAAQREAEAAEKAAMQFPDSPLK 310 Query: 308 KSLMEVVDFCLQR 320 ++L+++ F LQR Sbjct: 311 QTLIDLCAFSLQR 323 >gi|33519569|ref|NP_878401.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus] gi|33517232|emb|CAD83615.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus] Length = 324 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 124/321 (38%), Positives = 183/321 (57%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L +D+ +NF I KR+ S++ +I +KY+I SGGK++R + L A L Y Sbjct: 3 INQINKLIKQDIININFEIHKRLKSNIILINKFIKYIINSGGKKIRSTMILLIAKSLTYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 H +LA IEFIHTATLLHDDV+D S RRGK A +++GN S+L+GDF+ ++AF M Sbjct: 63 KTQHTILATLIEFIHTATLLHDDVIDHSTTRRGKTTANIIFGNPASILIGDFIYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E +S L ++ +AEGE+ QL+ + +T +Y+ +I KTA LF A + S Sbjct: 123 MTELQSLRILSLMADAVNIIAEGEILQLTYCNDPTITMNNYMQIIYKKTARLFEVASQSS 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDY-RGEVNEMGKNIGEDFRNGKPTLPVI 239 +++A QAL +YG +GIAFQL+DD+LDY ++ GKNIG D GK TLP++ Sbjct: 183 AILAHANIQQEQALSNYGKYIGIAFQLIDDLLDYNASDIVSFGKNIGNDLNEGKLTLPLL 242 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A T +E + I D K + L IM++ +L T A + KA + L Sbjct: 243 HAIYHSTPKEASIIHQAITD-KNNQNLLYTVLNIMQQYGSLDYTRKCAETKINKAINCLN 301 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 L S +K +L + F L R Sbjct: 302 ILSPSPYKHALKHLAYFILTR 322 >gi|289664594|ref|ZP_06486175.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667160|ref|ZP_06488235.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 332 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 126/322 (39%), Positives = 180/322 (55%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I Sbjct: 193 ALASGATVEVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + + L + RA Y A+ +L Sbjct: 253 AMAHSDATTRERLRQIVEQGDAA--AMPEVLAAIHATGGLDYSRQRAAEYAAAAELALNT 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 311 LPHSPAVAALRGLARYAVERTH 332 >gi|78048606|ref|YP_364781.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037036|emb|CAJ24768.1| Octaprenyl-diphosphate synthase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 332 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 126/322 (39%), Positives = 180/322 (55%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I Sbjct: 193 ALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + + L + RA Y A+ +L Sbjct: 253 AMAHSDATTRERLRQIVEQGDAA--AMPEVLAAIHATGGLDYSRQRAAEYAAAAEQALET 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 311 LPHSPAVAALRGLARYAVERTH 332 >gi|90580809|ref|ZP_01236612.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14] gi|90438077|gb|EAS63265.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14] Length = 323 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 131/319 (41%), Positives = 192/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM +V+ I ++ S+V +I + Y++ SGGKRLRPML + A L Y G Sbjct: 4 KAIQALTANDMAEVDAKIQAQLNSEVVLINQLGFYIVSSGGKRLRPMLAVLAARALGYDG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 64 DKHTTAAAFIEFIHTATLLHDDVVDESNMRRGKETANAAFGNAASVLVGDYIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +S + L+ +S +AEGE+ QL + + TE+ Y+ VI SKTA LF A+ ++++ Sbjct: 124 TSLRSLKILDIMSEATNVIAEGEVLQLMNCNDPNTTEDSYMQVIYSKTARLFEASTQIAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IA + A + YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A Sbjct: 184 IIADAPAEIELAFQEYGRYLGTAFQLIDDVLDYIADGKEMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G + + I +E L M E+ +L T+ RA +KA +L + Sbjct: 244 MRHGNAEQAAMIREAIEKAN-GMEKLDAILACMHEHGSLEYTQQRAEEEAEKAIAALAPI 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 DS +K++L+ + +QR Sbjct: 303 ADSEYKEALVALAHMSVQR 321 >gi|85858101|ref|YP_460303.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / decaprenyl diphosphate synthase [Syntrophus aciditrophicus SB] gi|85721192|gb|ABC76135.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / decaprenyl diphosphate synthase [Syntrophus aciditrophicus SB] Length = 324 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 114/310 (36%), Positives = 181/310 (58%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACA 70 ++++V + + S+V +IP++V +L+ SGGKR RP+L L +A + Y+G L+ Sbjct: 13 ELKRVEEEMEFHLRSEVAIIPEIVTHLLGSGGKRFRPLLLLISADLFGYQGRRCHTLSAV 72 Query: 71 IEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEAL 130 +EFIHTA+L HDDV+D + RRGKV+A +WGN VLVGDFL S+A+ ++ E S E + Sbjct: 73 LEFIHTASLFHDDVIDKAESRRGKVSANNIWGNAAVVLVGDFLYSKAYQLMAEDGSMEIM 132 Query: 131 EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSV 190 +S + ++EGE+ QL +++TEEDYL +I+ KTA+L SAA + + G + Sbjct: 133 HLISTTSNVMSEGEVFQLIKCGEVNLTEEDYLKIIEKKTAILISAACALGGYLGGAEVHQ 192 Query: 191 RQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREK 250 +ALK +G+ LG AFQ+ DD LDY + GK IG+D GK TLP+I +R T E+ Sbjct: 193 IEALKQFGLRLGSAFQMTDDTLDYVAREEDFGKVIGKDLNEGKMTLPLIYTLKRCTPEER 252 Query: 251 NFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSL 310 F ++ + + + ++ + D +A + + + L LP+ K++L Sbjct: 253 KFIETALAERRTREMPAGDILTLISRYDGITDALNQAETLIDEGRTFLAGLPEGPAKEAL 312 Query: 311 MEVVDFCLQR 320 V +F L R Sbjct: 313 FAVSEFVLNR 322 >gi|145588381|ref|YP_001154978.1| farnesyltranstransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046787|gb|ABP33414.1| Farnesyltranstransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 334 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 117/313 (37%), Positives = 180/313 (57%), Gaps = 3/313 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL--A 68 + + ++ +I R+ S V +I + Y+I +GGKR+RP L + A L ++ L A Sbjct: 20 EFKGLDEVIRLRLASKVALIDQISTYIIQAGGKRVRPALLMLVAKALANGKESAHTLEMA 79 Query: 69 CAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQE 128 +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M++ Sbjct: 80 AVVEFIHTATLLHDDVVDESTLRRGRETANAAFGNAASVLVGDFLYSRAFQMMVAPNDLR 139 Query: 129 ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQN 188 ++ LS T+AEGE+ QL + +V E YL VI+ KTA LF A+ E+ +++A + Sbjct: 140 VMQILSDATNTIAEGEVLQLLNMNDPEVDEASYLQVIRYKTAKLFEASTELGAILASATD 199 Query: 189 SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKR 248 S R+ ++G ++G AFQL+DD+LDY +MGKN G+D R GKPTLP+I + G+ Sbjct: 200 SQREQAAAFGRHIGTAFQLMDDLLDYTANAAQMGKNAGDDLREGKPTLPLIYLLENGSNE 259 Query: 249 EKNFWKSTINDGKISVENL-KKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 E+ ++ I + E++ + ++ + AL T+ A A D + P + Sbjct: 260 ERLLVRAAIEQNQDLPEDVFAQILGAVQSSGALDYTQAVAKREADLALDCISEFPSNEAT 319 Query: 308 KSLMEVVDFCLQR 320 +L ++ + L R Sbjct: 320 TALRDLCTYSLAR 332 >gi|319761641|ref|YP_004125578.1| polyprenyl synthetase [Alicycliphilus denitrificans BC] gi|317116202|gb|ADU98690.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC] Length = 349 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 135/302 (44%), Positives = 192/302 (63%), Gaps = 2/302 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +V+ +I R+ S V ++ V +Y+I +GGKRLRP L L T LEY+G+ Sbjct: 36 LIADDMREVDKVIAARLQSSVPLVGSVAQYIISAGGKRLRPALLLLTCGALEYKGEQRFN 95 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E S Sbjct: 96 LAAVVEFIHTATLLHDDVVDESTLRRGRPTANEAFGNPASVLVGDFLHTRSFQMMVEAGS 155 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ L+ +AEGE++QL + + + E YLHVI+SKTA LF A+ +++++AG Sbjct: 156 MRILQVLADATNVIAEGEVQQLMNTHDASLDEAGYLHVIRSKTAKLFEASARLAAILAGS 215 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QA YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I+A QRG+ Sbjct: 216 TPDIEQACADYGQALGTAFQVIDDVLDYDGDAQEMGKNLGDDLREGKVTLPLIIAMQRGS 275 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + ++ ++ I G S + L+ I+RE AL T A + + A D+ LP + + Sbjct: 276 QAQRELLRNVIETG--SADELQPVIAIIRETGALTATRDAAAAQARLAMDAAAKLPANPY 333 Query: 307 KK 308 K Sbjct: 334 TK 335 >gi|325925951|ref|ZP_08187318.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans 91-118] gi|325543616|gb|EGD15032.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans 91-118] Length = 332 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 126/322 (39%), Positives = 180/322 (55%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMTAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I Sbjct: 193 ALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + + L + RA Y A+ +L Sbjct: 253 AMAHSDATTRERLRQIVEQGDAA--AMPEVLAAIHATGGLDYSRQRAAEYAAAAEQALET 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + ++R + Sbjct: 311 LPHSPAVAALRGLARYAVERTH 332 >gi|225851044|ref|YP_002731278.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1] gi|225645501|gb|ACO03687.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1] Length = 320 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 109/321 (33%), Positives = 183/321 (57%), Gaps = 4/321 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EY 59 MK+L LK+ + + K + S+VE I + Y++ SGGKRLRP+L L + +L Sbjct: 1 MKILSREVLKE---IEERLSKYMDSEVEFILKIGNYILDSGGKRLRPVLVLTFSKLLKGE 57 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 + +A A+E++HTA+LLHDDVVD + RRGK AA V+GN T+VL GD++ + A Sbjct: 58 NEERDYPIAVAMEYLHTASLLHDDVVDGAETRRGKAAANRVFGNDTTVLTGDYMYANALY 117 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + + +S ++EG+L +L ++D+ EEDY +++ KTAVLF + V Sbjct: 118 LFSVYGDIDMIRNVSDAVKKMSEGQLLELKKIGDIDMREEDYFRILEGKTAVLFGSCCYV 177 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + G + +++ +YG+++GIAFQL+DD+LDY + ++GK + D R GK T P++ Sbjct: 178 GTALGGGSDKQKKSAYNYGLSIGIAFQLIDDLLDYIADEKKLGKPVCNDLREGKITYPLL 237 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + ++ EK F K I D +++++ +++E T +A Y A L Sbjct: 238 SVLDKLSEDEKEFVKGVIRDLNPDKKHIERVKNMVKEKGGFDKTIEKAREYVDTAVRELE 297 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 PDS + K L E+ + ++R Sbjct: 298 NFPDSEYLKELEELAKYIVER 318 >gi|51891328|ref|YP_074019.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863] gi|51855017|dbj|BAD39175.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863] Length = 331 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 98/313 (31%), Positives = 169/313 (53%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 D+ +V I + + M+ +V +L+ SGGKR+RP L + + + + Sbjct: 19 IADDLRQVETAIEAALSTQETMLEEVSTHLLRSGGKRIRPALVILASRFPGVELKQVIDV 78 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A A+E IH ATL+HDDVVD++ LRRG+ +W NQ SVL GD+L ++AF ++ +T + Sbjct: 79 AVAVELIHMATLVHDDVVDNADLRRGRPTVNALWNNQVSVLTGDYLFAKAFTLLADTGNN 138 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + +S V +++GEL Q++ +++ TEEDY I KT L + A + +++AGV Sbjct: 139 RVVRLMSEVVREMSQGELAQMASYFDVEQTEEDYYRRIARKTGYLIAEACRLGAVMAGVG 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 QA+ YGM +G++FQ+ DD+LD+ G+ +GK + D + G TLPVI + Sbjct: 199 EEQVQAVYDYGMGVGLSFQIADDLLDFFGDEETVGKPVCGDLKIGILTLPVIHGLAHAPR 258 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 R + + I I + + I+ E+ + +A + +KA +L +P + + Sbjct: 259 RAE--LRELILSRSIDDTAVARVKEILTESGSFDYARGKAREHIEKAVRALDHVPTLATR 316 Query: 308 KSLMEVVDFCLQR 320 +L + +F + R Sbjct: 317 PALKTLAEFVINR 329 >gi|89070187|ref|ZP_01157515.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516] gi|89044203|gb|EAR50354.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516] Length = 332 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 149/322 (46%), Positives = 209/322 (64%), Gaps = 2/322 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L + D+ VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLA A + Y Sbjct: 12 ERLAEALSDDLAAVNALIRERMQSEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYD 71 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV LA +EFIHTATLLHDDVVD+SA RRG+ A L+W NQ+SVLVGD+L +++F + Sbjct: 72 GPYHVHLAATVEFIHTATLLHDDVVDESAQRRGRPTANLLWDNQSSVLVGDYLFAKSFLL 131 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++T + + L LS + T+AEGE+ QL+ S++L E Y+ VI+ KTA LFSAA EV Sbjct: 132 MVDTGNLDVLRILSQASATIAEGEVLQLTASRSLATDEAVYMKVIRGKTAALFSAATEVG 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG V +AL YG LGIAFQ+VDD+LDY G GKN+G+DFR K TLPVI Sbjct: 192 GVIAGQGPEVCRALFDYGDALGIAFQIVDDLLDYEGTEAT-GKNVGDDFRERKLTLPVIK 250 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A R E+ FW+ TI G+ +L+ A ++ + AL +T A + +AK +L Sbjct: 251 AVARADAEERAFWQRTIEKGRQEEGDLETALGLLARHGALDETRAAAIEWAARAKAALAP 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPDS+ + L ++ D+ + R++ Sbjct: 311 LPDSALTEMLADLADYVVARIS 332 >gi|83590100|ref|YP_430109.1| trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC 39073] gi|83573014|gb|ABC19566.1| Trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC 39073] Length = 322 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 94/313 (30%), Positives = 167/313 (53%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 D+++V +L+++ + ++ ++L+ +GGKRLRP + A + + L Sbjct: 10 VQADLQQVEAELLRQVDAPDPVLSQAARHLVQAGGKRLRPAFAILAARCCGAPLERILPL 69 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A A+E IH ATL+HDDV+D S +RRG+ WG + S+ GD+L +++ +V Sbjct: 70 AVALEMIHMATLVHDDVIDASPIRRGRPTVWARWGQELSLHTGDYLFARSLILVATYDDP 129 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L+ V+ + +GE++Q++ + +LD+T DYL I KTA+L +A+ E+ ++ AG Sbjct: 130 RIPSVLASVSVKMVQGEIQQMAAAFDLDITLRDYLDRIYRKTALLIAASCELGAIAAGAD 189 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + + L+ YG NLG+AFQ+ DDVLD + ++GK IG D R G TLP I A Q K Sbjct: 190 TATIRHLRYYGRNLGLAFQITDDVLDMVADPEQLGKPIGGDLRQGVITLPAIYALQASPK 249 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++K + + +++A ++++ + A Y ++A+ LP + Sbjct: 250 KQK--LIHLLGKRDKTQAEIQEAIQLIKDCGGIKYALDIAEGYLERARKQASYLPPGVAR 307 Query: 308 KSLMEVVDFCLQR 320 +L + + R Sbjct: 308 DTLTSLTYYIRTR 320 >gi|160900919|ref|YP_001566501.1| polyprenyl synthetase [Delftia acidovorans SPH-1] gi|160366503|gb|ABX38116.1| Polyprenyl synthetase [Delftia acidovorans SPH-1] Length = 359 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 131/298 (43%), Positives = 184/298 (61%), Gaps = 2/298 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +V+ +I +R+ + V +I + +Y+I +GGKRLRP L L L Y G + + Sbjct: 46 LITDDMREVDHVIAQRLTTTVPLIAQISQYIIAAGGKRLRPALLLMVCNALGYEGRDRHV 105 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S++F M++E S Sbjct: 106 LAAVVELIHTATLLHDDVVDESTLRRGRPTANETFGNPASVLVGDFLHSRSFQMMVEVGS 165 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ LS +AEGE++QL + + + E YLHVI+SKTA LF A+ ++ +++A Sbjct: 166 MRVLKILSDATNVIAEGEVQQLINTHDASLDEAGYLHVIRSKTAQLFEASAQLGAVLADA 225 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QA YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I A QRGT Sbjct: 226 PREIEQACAIYGQALGTAFQIIDDVLDYTGDTQEMGKNLGDDLREGKCTLPLIAAMQRGT 285 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + ++ I G S E L I+R AL A++ ++A D++ LP + Sbjct: 286 PEQAAIVRNAIEQG--STEQLSAVVDIVRSTGALDVAREAAHAEARRAIDAINVLPSN 341 >gi|319789063|ref|YP_004150696.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] gi|317113565|gb|ADU96055.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] Length = 324 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 111/323 (34%), Positives = 181/323 (56%), Gaps = 2/323 (0%) Query: 1 MKMLE--DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 MK+ + ++ +++ V + + S V ++ Y++ SGGKR+RP LT+ ++E Sbjct: 1 MKIFKPFEVVREELLSVEEFSRELLSSKVSLVLRAGGYILDSGGKRVRPGLTVIAGKLVE 60 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 D + +A +E++HTATLLHDD+VD + LRRG+ + V+GN +VLVGD++ ++A Sbjct: 61 APLDRLIPVATVMEYMHTATLLHDDIVDGAKLRRGRPSVNAVFGNDVAVLVGDYMFAKAI 120 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 ++ E L+ + +AEGEL QL ++++TEE+Y +I KTA L S E Sbjct: 121 YVLAVYGGPEVLKTAAKTVQDMAEGELLQLEKIGDINLTEEEYFDIIYRKTASLLSTCCE 180 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 +++ G R+ALK YG +G AFQLVDD DY + +GK G D R GK T P+ Sbjct: 181 CGAIVGGASEKERKALKDYGTYIGYAFQLVDDAFDYISDEKTIGKPAGNDIREGKVTYPL 240 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 + A +R T+ E+ + +N+ + E ++ + E T A + ++AK+SL Sbjct: 241 LWALKRATEEEREAVERVLNNPSPTKEEIELVRNFVLEKGGEKATFELARDFVKRAKESL 300 Query: 299 RCLPDSSWKKSLMEVVDFCLQRL 321 +S KK+L EV DF ++R Sbjct: 301 EIFKESPLKKALFEVADFIVERT 323 >gi|330823512|ref|YP_004386815.1| trans-hexaprenyltranstransferase [Alicycliphilus denitrificans K601] gi|329308884|gb|AEB83299.1| Trans-hexaprenyltranstransferase [Alicycliphilus denitrificans K601] Length = 349 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 135/302 (44%), Positives = 192/302 (63%), Gaps = 2/302 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +V+ +I R+ S V ++ V +Y+I +GGKRLRP L L T LEY+G+ Sbjct: 36 LIADDMREVDKVIAARLQSSVPLVGSVAQYIISAGGKRLRPALLLLTCGALEYKGEQRFN 95 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E S Sbjct: 96 LAAVVEFIHTATLLHDDVVDESTLRRGRPTANEAFGNPASVLVGDFLHTRSFQMMVEAGS 155 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ L+ +AEGE++QL + + + E YLHVI+SKTA LF A+ +++++AG Sbjct: 156 MRILQVLADATNVIAEGEVQQLMNTHDASLDEAGYLHVIRSKTAKLFEASARLAAILAGS 215 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QA YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I+A QRG+ Sbjct: 216 TPDIEQACADYGQALGTAFQVIDDVLDYDGDAQEMGKNLGDDLREGKVTLPLIIAMQRGS 275 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + ++ ++ I G S + L+ I+RE AL T A + + A D+ LP + + Sbjct: 276 QAQRELLRNVIETG--SADELQPVIAIIRETGALTATRDAAAAQARLAMDAAAKLPANPY 333 Query: 307 KK 308 K Sbjct: 334 TK 335 >gi|167842012|ref|ZP_02468696.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis MSMB43] Length = 330 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 127/313 (40%), Positives = 177/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L + +L Sbjct: 18 IASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQKHVL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 138 RVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGAD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ P S +K Sbjct: 258 EQSTLAREAIEHG--GTDRFDTIFDAITLSGALDHTLECARQEAQAAATAISSFPSSVFK 315 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + R Sbjct: 316 ESLLELCFYSTSR 328 >gi|285017833|ref|YP_003375544.1| octaprenyl-diphosphate synthase [Xanthomonas albilineans GPE PC73] gi|283473051|emb|CBA15556.1| putative octaprenyl-diphosphate synthase protein [Xanthomonas albilineans] Length = 331 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 125/322 (38%), Positives = 184/322 (57%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ DM V+ LI R+ SDV +I + ++I +GGKRLRPML + Sbjct: 12 LPQIQMFAAPDMAAVDALIRHRLASDVVLINQIADHIISAGGKRLRPMLVMLAGRACGSH 71 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 72 GPKHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 131 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E S + L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 132 MVELDSMAVMRLLADTTNRIAEGEVLQLLHVHNPDTDEAAYLQVIERKTAVLFAAGTRLG 191 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L AG ++V+Q L +YGM+LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I Sbjct: 192 ALAAGATDAVQQCLYAYGMHLGYAFQIADDVLDYTADAADLGKNLGDDLAEGKATLPLIH 251 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + ++ + L + RA Y A+ +L Sbjct: 252 AIAHADASTRARLRQIVEHG--DADAMPEVLTAIQASGGLDYSRRRAAEYAAAAERALDS 309 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LPD+ +L + + ++R + Sbjct: 310 LPDNDAVAALRGLARYAVERKH 331 >gi|114570734|ref|YP_757414.1| trans-hexaprenyltranstransferase [Maricaulis maris MCS10] gi|114341196|gb|ABI66476.1| Trans-hexaprenyltranstransferase [Maricaulis maris MCS10] Length = 340 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 147/319 (46%), Positives = 214/319 (67%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + L L DM +V+ LIL+R+ S VE+IP++ +YLI +GGKR+RPM+T+A A M+ + Sbjct: 20 EALARLAHDDMRRVDALILERLDSHVELIPELARYLIEAGGKRVRPMITVAAANMIGHSD 79 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + LA A+EFIHTATLLHDDVVD+S +RRGK AA LVWGN +SVLVGDFL +++F ++ Sbjct: 80 IAPLKLAAAVEFIHTATLLHDDVVDESGMRRGKAAANLVWGNASSVLVGDFLFARSFSLM 139 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E S AL LS A T+AEGE+RQLS K++ V+ E Y+ +I +KTA LF+AA +VS Sbjct: 140 VEAGSMRALGVLSDAASTIAEGEVRQLSAVKDVGVSVETYMQIIDAKTAALFAAAAQVSG 199 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A + AL++YG LG+AFQLVDD LDY G ++GK+ G+DFR GK TLPV LA Sbjct: 200 IVADRPANEETALETYGRELGLAFQLVDDALDYSGASAKLGKSTGDDFREGKVTLPVALA 259 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + E FW I G+ + ++A ++ + AL T +A ++ ++A+++L Sbjct: 260 IAAASTEETAFWDRVIARGEQVEGDFERAISLVNTHGALAATVTQARNHARRAREALAIF 319 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + W+ +L ++ DF R Sbjct: 320 PANKWRTALEDLADFVADR 338 >gi|21243633|ref|NP_643215.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri str. 306] gi|21109209|gb|AAM37751.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri str. 306] Length = 332 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 127/322 (39%), Positives = 182/322 (56%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I Sbjct: 193 ALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + G + + + +R L + RA Y A+ +L Sbjct: 253 AMAHSDATTRERLRQIVEQGDAA--AMPEVLAAIRATGGLDYSRQRAAEYAAAAEQALET 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S+ +L + + ++R + Sbjct: 311 LPHSAAVAALRGLARYAVERTH 332 >gi|159045612|ref|YP_001534406.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12] gi|157913372|gb|ABV94805.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12] Length = 334 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 146/321 (45%), Positives = 205/321 (63%), Gaps = 1/321 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +DM+ VN LI +R+ S+ IP+V +L+ +GGKRLRPMLTLATA + Y Sbjct: 13 ERLATHLAEDMDAVNVLIRERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLATARLCGYT 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W NQ+SVLVGD+L +++F + Sbjct: 73 GPYHVHLAATVEFIHTATLLHDDVVDESNQRRGRPTANLLWDNQSSVLVGDYLFARSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET S L+ L+ A T+AEGE+ QLS +++L E+ YL V++ KTA LFSAA EV Sbjct: 133 MVETGSLRVLDILANAAATIAEGEVLQLSAAQDLATDEDIYLKVVRGKTAALFSAATEVG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +IAG + +AL +YG LGIAFQ+VDD+LDY G+ + GKNIG+DFR K TLPVI Sbjct: 193 GVIAGADEAQVRALFTYGDALGIAFQIVDDLLDYGGDSTKTGKNIGDDFRERKLTLPVIK 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + E+ FW I G +L+ A ++ + A+ T A +Y +AK +L Sbjct: 253 AVAKADLEERAFWSRVIEKGDQRDGDLEHALALLDRHGAMAATRADAVAYAAQAKAALEA 312 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 + L ++ D+ + R+ Sbjct: 313 VAPHPLTDMLRDLADYVVARV 333 >gi|167586043|ref|ZP_02378431.1| Trans-hexaprenyltranstransferase [Burkholderia ubonensis Bu] Length = 331 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 127/313 (40%), Positives = 179/313 (57%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 19 IASDMEQVNRVIRQSLASDVVLINQIAEYIIGAGGKRLRPALLLFVAGALGETSHQRHVL 78 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 79 AAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 138 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 139 RVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEASARLGAVLAGAD 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 ATTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTP 258 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + + F + + AL T A Q A ++ PDS +K Sbjct: 259 EQAALAREAIEQG--GTDRFETIFDAITRSGALDHTLECARQEAQAAAAAIAAFPDSVYK 316 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + R Sbjct: 317 ESLLELCSYSTSR 329 >gi|262277442|ref|ZP_06055235.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114] gi|262224545|gb|EEY75004.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114] Length = 337 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 121/319 (37%), Positives = 195/319 (61%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ + ++KV+ I ++ S VE++ ++ +L+ +GGKRLRP+LT+ ++ + Y+G+ Sbjct: 19 IKSAYQEQLKKVDDHIKLKLSSHVELVGEMATHLMSTGGKRLRPLLTICSSEIFNYKGNR 78 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H+ LA +E IH ATLLHDDV+D S RRG +WGN++S+L GD+LLS+ F M+++ Sbjct: 79 HINLAACVELIHNATLLHDDVIDKSESRRGFKTTNAIWGNKSSILAGDYLLSRCFEMMVD 138 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 SQE L+ LS V+ +A+GE+ QL K +D+ E++YL +I +KTA LF A++ V I Sbjct: 139 DGSQEVLKILSSVSSEIAQGEIMQLQFEKQVDMVEKNYLDIISAKTASLFGASMRVGGCI 198 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 N ++AL+SYG NLGI FQ+ DD+LDY + GK IG DF GK TLP+IL FQ Sbjct: 199 NDRSNKEKEALESYGRNLGICFQITDDILDYSSKEQVFGKKIGNDFLEGKITLPIILLFQ 258 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + T +E+ + + S + ++ ++ + + + + RA + A DSL Sbjct: 259 KSTPKEREMLQKYFSQSVRSENDFEQTLKLINKYQIIETCKKRADYFSNVASDSLSVFEK 318 Query: 304 SSWKKSLMEVVDFCLQRLN 322 + + L E+ + + RLN Sbjct: 319 NFVVEKLQELSFYIVNRLN 337 >gi|329118546|ref|ZP_08247250.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC BAA-1200] gi|327465281|gb|EGF11562.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC BAA-1200] Length = 324 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 119/322 (36%), Positives = 188/322 (58%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + D+ +VN ++ + + S+V +I + Y+I +GGKRLRP++T+ L Y Sbjct: 5 LPYFQKNLATDLGRVNQVVGRAVQSEVALISQIGSYIIGAGGKRLRPIITILAGKSLGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD LA +EFIHT+TLLHDDVVD+S +RRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 GDPLYSLAAMVEFIHTSTLLHDDVVDESDMRRGRETANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S + LE ++ +AEGE+ QL N D++E +YL VI+ KTA LF AA +V Sbjct: 125 MVGSGSMKILEVMADATNIIAEGEVMQLMNIGNTDISETEYLRVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG AL+ YGM +G AFQ+VDD+LDY G+ E+GKN+G+D GKPTLP+I Sbjct: 185 AILAGASAEQEAALRDYGMYVGTAFQIVDDILDYCGDPAEIGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +GT + ++ S ++ + + AL +A A L Sbjct: 245 LMHQGTPEAARDVRDALHHADRS--RFEQIHAHVTASDALAYCARQARIAVDNALSCLDK 302 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP + ++ ++ + L R++ Sbjct: 303 LPANETTLAMRQLAEESLARVS 324 >gi|222834545|gb|EEE73022.1| predicted protein [Populus trichocarpa] Length = 309 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 131/309 (42%), Positives = 189/309 (61%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L +A +Y G H LA + Sbjct: 1 MRAVDAVIRRRLSSEVPLIEQIGEYIIGAGGKRLRPVILLLSARAFDYEGHRHHELAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M++E S +E Sbjct: 61 EFIHTATLLHDDVVDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMVEAGSMRIME 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS +AEGE+ QL + +VT E YL VI+ KTA LF A+ ++ +++AG + Sbjct: 121 ILSNATNVIAEGEVLQLLNMHDPEVTVERYLQVIRYKTAKLFEASAQLGAVLAGADAEME 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +A YG +G AFQL+DD+LDY +MGKN G+D R GKPTLP++ + GT +++ Sbjct: 181 EAAAEYGRRIGTAFQLIDDMLDYTASAEQMGKNAGDDLREGKPTLPLLHLLEHGTAQQRE 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G E+ F + + AL T A + A+ + PDS K++L+ Sbjct: 241 LARDAIVQG--GTEHFDAVFSAIHASGALDVTFAAAQREAEAAEKAAMQFPDSPLKQTLI 298 Query: 312 EVVDFCLQR 320 ++ F LQR Sbjct: 299 DLCAFSLQR 307 >gi|124516584|gb|EAY58092.1| trans-hexaprenyltranstransferase [Leptospirillum rubarum] Length = 330 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 117/320 (36%), Positives = 189/320 (59%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + +D+ V +++ + I +V ++I SGGKRLRP+L + + + Y Sbjct: 9 LKNVWADYEQDLLAVENCLIEYGGDTNDYIREVTSHIIQSGGKRLRPLLMIIASRISGYS 68 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + LL+ +EFIHTATLLHDDVVD + +RRGK++A +WGNQT+VLVGD+L + A M Sbjct: 69 GPHISLLSAVVEFIHTATLLHDDVVDHAEMRRGKLSANQIWGNQTAVLVGDYLYATALWM 128 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + L+L ++EGE+ +L L NL EEDYL V++ KTA L + + Sbjct: 129 ATGVHNHEINDTLTLACRKMSEGEVLELILDNNLSAREEDYLSVVECKTAALTAGTCRIG 188 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G ++AL+ +G N+G++FQ+ DD LDY +GK +G+D GK TLP++ Sbjct: 189 AILGGADTEKKKALEDFGYNIGMSFQIADDALDYMAREERLGKTLGKDLSEGKMTLPLLH 248 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 R T ++ I G ++ ++L + +M+ +L + +A S+ QKAK SL Sbjct: 249 CLSRATSAQRESLVQKIGKGDVTEQHLHEVIELMKSTGSLEFSLEKAISFVQKAKASLEA 308 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PDS K++L+ + DF ++R Sbjct: 309 FPDSLHKQNLLFLSDFVIER 328 >gi|90416595|ref|ZP_01224526.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium HTCC2207] gi|90331794|gb|EAS47022.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium HTCC2207] Length = 331 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 124/332 (37%), Positives = 193/332 (58%), Gaps = 13/332 (3%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M D VN LI+ + S+V ++ ++ Y++ SGGKRLRP++ L +AL Y+ Sbjct: 1 MLSFHKAVESDFSAVNELIIANLQSNVGLVENIGHYIVGSGGKRLRPVVVLLSALASGYQ 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ +A IEFIHTATLLHDDVVD SALRRG+ A WGN SVLVGDF+ S+AF M Sbjct: 61 GKQHLTMAAVIEFIHTATLLHDDVVDVSALRRGRETANNQWGNAPSVLVGDFIYSRAFQM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ + ++ ++EGE++Q+ + N + E Y VI KTA LF AA + Sbjct: 121 LVDVGDMPIMGVIADATNLISEGEVQQMGNAGNSAIDEATYYEVIYRKTAKLFEAAARIG 180 Query: 181 SLIAGVQ-----------NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229 +++A + ++ A+ +YG +LG+AFQ+ DDV+DY+G+ +GKN+G+D Sbjct: 181 AMLAAEEADLFVGDSAILDARTDAMAAYGKHLGLAFQIADDVMDYQGDSQSIGKNVGDDL 240 Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289 GK TLP+I A ++K S I S E+ +K +R++ +L + +A Sbjct: 241 AEGKMTLPLIHARDHLDDQKKQLICSAIESK--SAEHFEKILAAVRQSSSLEYSVTQAQE 298 Query: 290 YGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 + AK SL +P+S +K+ L ++ DF + R+ Sbjct: 299 QAELAKQSLAQMPESDFKEVLSDLADFAVSRI 330 >gi|308388198|pdb|3OYR|A Chain A, Crystal Structure Of Polyprenyl Synthase From Caulobacter Crescentus Cb15 Complexed With Calcium And Isoprenyl Diphosphate gi|308388199|pdb|3OYR|B Chain B, Crystal Structure Of Polyprenyl Synthase From Caulobacter Crescentus Cb15 Complexed With Calcium And Isoprenyl Diphosphate Length = 345 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 150/317 (47%), Positives = 209/317 (65%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A + D+ Sbjct: 27 LVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGADNDH 86 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF +++E Sbjct: 87 FQKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVE 146 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 T S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E ++ Sbjct: 147 TNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVS 206 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AGV + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++LA Sbjct: 207 AGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLLAIA 266 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 R RE FW+ I + + + ++A ++ + AL T A Y KAK +L P Sbjct: 267 RSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPA 326 Query: 304 SSWKKSLMEVVDFCLQR 320 + W+++L E+ DF + R Sbjct: 327 NDWREALEELADFAVSR 343 >gi|206603458|gb|EDZ39938.1| Trans-hexaprenyltranstransferase [Leptospirillum sp. Group II '5-way CG'] Length = 330 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 116/320 (36%), Positives = 191/320 (59%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + +D+ V +++ + I +V ++I SGGKRLRP+L + + + Y Sbjct: 9 LKNVWADYEQDLLAVENCLIEFGGDTNDYIREVTSHIIQSGGKRLRPLLMIIASRISGYS 68 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G + LL+ +EFIHTATLLHDDVVD + +RRGK++A +WGNQT+VLVGD+L + A M Sbjct: 69 GPHISLLSAVVEFIHTATLLHDDVVDHAEMRRGKLSANQIWGNQTAVLVGDYLYATALWM 128 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + L+L ++EGE+ +L L NL EEDYL+V++ KTA L + + Sbjct: 129 ATGVHNHEINDTLTLACRKMSEGEVLELILDNNLSAREEDYLNVVECKTAALTAGTCRIG 188 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G +++L+ +G N+G++FQ+ DD LDY +GK +G+D GK TLP++ Sbjct: 189 AILGGADPEKKKSLEDFGYNIGMSFQIADDALDYMAREERLGKTLGKDLSEGKMTLPLLH 248 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 R T ++ I G ++ ++L++ +M+ +L + +A S+ QKAK SL Sbjct: 249 CLSRATSTQRESLVQKIGKGDVTKQHLREVVDLMKSTGSLEFSLEKAISFMQKAKASLEA 308 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PDS K++L+ + DF ++R Sbjct: 309 FPDSLHKQNLLFLSDFVIER 328 >gi|207744381|ref|YP_002260773.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum IPO1609] gi|206595786|emb|CAQ62713.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum IPO1609] Length = 338 Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 126/299 (42%), Positives = 183/299 (61%), Gaps = 2/299 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM V+ +I +R+ S+V +I + +Y+I +GGKRLRP++ L A L YRG++H L Sbjct: 40 VAEDMHAVDAVIRRRLGSEVALINQIGEYIISAGGKRLRPVILLLMANALGYRGNHHYEL 99 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTA LLHDDVVD+S LRRG+ A V+GN SVLVGDFL S+AF M+++ S Sbjct: 100 AAVVEFIHTAALLHDDVVDESELRRGRQTANAVFGNAASVLVGDFLYSRAFQMMVQADSM 159 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ L+ ++EGE+ QL + DVTEE YL VI+ KTA LF AA ++ ++++G Sbjct: 160 RVMQILADATNVISEGEVLQLLNMHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGAD 219 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + A YG +G AFQ+VDD+LDY ++MGKN G+D R GKPTLP+I GT+ Sbjct: 220 AATEAAAAEYGRRIGTAFQIVDDLLDYTATADQMGKNAGDDLREGKPTLPLIHLLSHGTE 279 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 ++ + I G E+ F ++ + AL T A A +++ LP S + Sbjct: 280 EQRALARQAIEQG--GTEHFDAIFDAIQASGALEYTRKAAEREASAAAEAIIALPPSQF 336 >gi|146329727|ref|YP_001209836.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A] gi|146233197|gb|ABQ14175.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A] Length = 348 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 114/320 (35%), Positives = 194/320 (60%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L +ME+ ++ + I ++V + V++Y + + GKR RPML L +A + +YR Sbjct: 29 LSDIQRLIANEMEQTERVMQREIYTEVALAQSVMRYALQAKGKRFRPMLHLLSAGVCDYR 88 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD A IEFIH ATLLHDDVVD S +RRG+ +A +++ N S+LVGDFL ++AF + Sbjct: 89 GDFAPTAAAFIEFIHNATLLHDDVVDSSDIRRGQASAHIIFSNAASILVGDFLYTRAFQL 148 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + L+ ++ +A GE+ QL+ N D+ E Y VI+ KTAVLFSAA +++ Sbjct: 149 MVSSGNAAVLKTMADATNLIAAGEVMQLANMHNPDIDETCYYRVIELKTAVLFSAACKIA 208 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + +AGV AL YG LG+AFQ++DD+LDY G+ +++GK +G+D GKPT+P+I Sbjct: 209 AQLAGVSEEKIAALADYGKKLGMAFQMIDDMLDYMGDESKIGKALGDDLAEGKPTMPLIR 268 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q+ ++ ++ + G E + + ++++ AL T+ +A A ++L Sbjct: 269 ALQQLCDPDQKRLRAILQTG--DREAITEVITLLKKTDALAYTQAQAEKMATAAAEALMI 326 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P++ +K +L+ + + R Sbjct: 327 FPENDYKNALISLAYQAVHR 346 >gi|118580423|ref|YP_901673.1| trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379] gi|118503133|gb|ABK99615.1| Trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379] Length = 322 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 126/320 (39%), Positives = 191/320 (59%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ ++ D+++V + SDV +I V +Y++ SGGKR+RP L L A + +Y+ Sbjct: 1 MQAALNIIGDDLKRVEQQFRTDLESDVPLIRKVGEYVLSSGGKRVRPALLLLAARLCDYQ 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 GD V LA IEFIHTATLLHDDVVD + LRRG +A +WGN+ SVLVGDFL S++F + Sbjct: 61 GDKAVPLASVIEFIHTATLLHDDVVDSATLRRGLASANTLWGNEASVLVGDFLFSKSFSL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S + L+ LS +AEGE+ QL + L++TEE Y+ V++SKTA+L SAA E Sbjct: 121 MVAVGSLDILKVLSDATTVIAEGEVMQLLCTGELELTEERYIDVVRSKTAILMSAACEAG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G RQAL +GMNLGIAFQL+DD LDY E GK+IG D GK T+P+I Sbjct: 181 AILGGAAPERRQALSDFGMNLGIAFQLMDDTLDYIATEEEFGKSIGHDLEEGKITMPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + T E++ + + +++++ ++ +++ + T A Y Q DSL Sbjct: 241 VLRHCTPSERDQIATVVEKDEMTLDEFRQVSGLVQRYGGIDYTVDAARRYIQGCADSLSL 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +L+++ + + R Sbjct: 301 FASGPVADALLDLAGYVVTR 320 >gi|220964307|gb|ACL95663.1| trans-isoprenyl diphosphate synthase [Caulobacter crescentus NA1000] Length = 322 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 151/320 (47%), Positives = 210/320 (65%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A + Sbjct: 1 MDRLVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGAD 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D+ LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF + Sbjct: 61 NDHFQKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFEL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ET S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E Sbjct: 121 MVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AGV + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++L Sbjct: 181 AVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLL 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A R RE FW+ I + + + ++A ++ + AL T A Y KAK +L Sbjct: 241 AIARSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAM 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P + W+++L E+ DF + R Sbjct: 301 FPANDWREALEELADFAVSR 320 >gi|225849175|ref|YP_002729339.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644434|gb|ACN99484.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense Az-Fu1] Length = 317 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 116/311 (37%), Positives = 187/311 (60%), Gaps = 1/311 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLAC 69 D EKV + K + S V+ I V Y++ GGKR+RP L L A M+ Y + +LA Sbjct: 5 DKEKVESTLRKYLDSSVDFILQVGGYILDGGGKRVRPYLVLKFASMIRGYNKEEDYILAS 64 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+E++HTA+LLHDDVVD+S RRG++ A V+GN T+VLVGD++ + A + + Sbjct: 65 ALEYLHTASLLHDDVVDESEKRRGRLTANRVFGNDTTVLVGDYMYANALYLFSIYGDIDM 124 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ +S +AEG+L +L N D T +DY ++ KTAVLF + V + +A + Sbjct: 125 IKNVSDSVKKMAEGQLLELKKIANFDTTFDDYYKIVLGKTAVLFGSCCYVGTALASEDKN 184 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 +++ YG+NLG+AFQ+VDD+LDY G+ ++GK++ D + GK T P+++ K + Sbjct: 185 LKENAYQYGVNLGVAFQIVDDILDYEGDEEKVGKSLMNDLKEGKITYPLLVVKDILNKED 244 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 K+F KS + D SVE+L KA I+ + + + A SY +KA ++L+ PD+ K+ Sbjct: 245 KDFIKSVVLDKNPSVESLLKAKKIVEDYGGIEKAKADAESYVRKAIENLKDFPDNKDKQD 304 Query: 310 LMEVVDFCLQR 320 L+ + + ++R Sbjct: 305 LINLAHYIVKR 315 >gi|302383413|ref|YP_003819236.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302194041|gb|ADL01613.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 346 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 143/326 (43%), Positives = 204/326 (62%), Gaps = 5/326 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + L L DM V+ LIL R+ S V +IP + ++++ +GGKRLRP+LT+A A Sbjct: 21 EALARLAKVDMAAVDALILDRMQSSVPVIPLLAEHIVSAGGKRLRPLLTIAAARSATADR 80 Query: 62 DNHVL-----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + L LA ++EFIHTATLLHDDVVD S RRGKVAA L+WG+ TSVLVGDFL ++ Sbjct: 81 PDADLTAALKLAASVEFIHTATLLHDDVVDGSERRRGKVAAHLIWGSATSVLVGDFLFAR 140 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ET AL L+ + +A+GE+ QL+ + +L++ +E YL +I +KTA LF+AA Sbjct: 141 AFELMVETDQIRALGILAQASSVIAQGEVLQLTRAHDLNLDQETYLRIISAKTAELFAAA 200 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 E ++ G AL+SYG+NLG+AFQL DD LDY G +GKN G+DFR GK T+ Sbjct: 201 AESGAVGVGADPKTTSALRSYGLNLGLAFQLADDALDYGGSSEALGKNAGDDFREGKVTM 260 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 P++LA R RE FW TIN + + ++ ++A ++ A+ T A Y AK Sbjct: 261 PLLLAVARTRGREDAFWDRTINGNQRTDDDFRRARELIVGTGAVSATLDAAGEYADAAKT 320 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 +L LP+ WK +L + DF + R + Sbjct: 321 ALGVLPNGEWKAALERLADFAVSRAS 346 >gi|89075549|ref|ZP_01161954.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34] gi|89048689|gb|EAR54261.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34] Length = 323 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 132/319 (41%), Positives = 192/319 (60%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K ++ LT DM +V+ I ++ S+V +I + Y++ SGGKRLRPML + A L Y G Sbjct: 4 KAIQALTANDMAEVDAKIQAQLNSEVVLINQLGFYIVSSGGKRLRPMLAVLAARALGYDG 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H A IEFIHTATLLHDDVVD+S +RRGK A +GN SVLVGD++ +++F M+ Sbjct: 64 DKHTTAAAFIEFIHTATLLHDDVVDESNMRRGKETANAAFGNAASVLVGDYIYTRSFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +S + L+ +S +AEGE+ QL + + TE+ Y+ VI SKTA LF A+ ++++ Sbjct: 124 TSLRSLKILDIMSEATNVIAEGEVLQLMNCNDPNTTEDSYMQVIYSKTARLFEASTQIAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +IA + AL+ YG LG AFQL+DDVLDY + EMGKN+G+D GKPTLP++ A Sbjct: 184 IIAQAPAEIELALQEYGRYLGTAFQLIDDVLDYIADGKEMGKNVGDDLAEGKPTLPLLHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 G + + I +E L M E+ +L T+ RA +KA +L + Sbjct: 244 MNHGNAEQSTMIREAIEKAN-GMEKLDAILAAMHEHGSLEYTQQRAEEEAEKAIAALAPI 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 DS +K++L+ + +QR Sbjct: 303 ADSQYKEALVALAHMAVQR 321 >gi|254418195|ref|ZP_05031919.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3] gi|196184372|gb|EDX79348.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3] Length = 324 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 147/322 (45%), Positives = 207/322 (64%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L L DM +V+ LI+ R+ SDV +IP + ++L+ +GGKRLRP+LT+A A Sbjct: 1 MNALVRLAGTDMAEVDALIIDRMQSDVPIIPKLAEHLVSAGGKRLRPLLTVAAARASGTE 60 Query: 61 GDNHVL--LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 GD LA A+EFIHTATLLHDD+VD S LRRGKVAA L+WG TSVLVGDFL ++AF Sbjct: 61 GDILSPKKLAAAVEFIHTATLLHDDIVDASELRRGKVAAHLIWGAPTSVLVGDFLFARAF 120 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +++ET S AL L+ + ++EGE+ QL+ + +L++ + YL +I +KTA LF+AA E Sbjct: 121 ELMVETDSMRALGILAQASRVISEGEVLQLTRAHDLNLDQATYLQIISAKTAELFAAAAE 180 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 ++ AG + AL+ YGM LGIAFQL DD LDY +GKN G+DF GK TLP+ Sbjct: 181 AGAVGAGADAAATAALRDYGMALGIAFQLADDALDYGATAEALGKNAGDDFNEGKATLPL 240 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 +LA R RE +FW+ T+ G+ + E+ +A ++ + A+ T A Y +AK +L Sbjct: 241 LLAVARTRGREDDFWERTVTKGERTPEDFARARELVVGSGAIGATLDLAGDYADQAKAAL 300 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 LP S W+ +L ++ DF + R Sbjct: 301 SVLPASDWRAALEDLADFAVSR 322 >gi|258544867|ref|ZP_05705101.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC 15826] gi|258519890|gb|EEV88749.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC 15826] Length = 326 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 122/319 (38%), Positives = 188/319 (58%), Gaps = 2/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + L +DM+ L+ + S+V + V++Y I GGKR RP+LTL + + +YRG Sbjct: 8 EAIRQLVQQDMQATEALMRAEMQSEVPLAELVMQYAIGDGGKRFRPLLTLLSCGLCDYRG 67 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 ++ + A IEFIH ATLLHDDVVD+SALRRGK +A + +GN SVLVGDFL ++AF ++ Sbjct: 68 EHAITAAAFIEFIHNATLLHDDVVDESALRRGKPSANIAFGNAASVLVGDFLYTRAFQLM 127 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + T + + ++ +A GE+ QL + DV E Y VI+ KTAVLF+AA + + Sbjct: 128 VRTGNSAVIAMMADAVNLIAAGEVMQLGNMHDPDVDEPRYYRVIELKTAVLFAAACKTAG 187 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L+AG+ + + L YG LG+AFQ++DD+LDY G+ +GK++G+D GKPTLP+I A Sbjct: 188 LLAGLPEARSEQLAVYGRKLGMAFQIMDDLLDYTGDEALIGKSLGDDLAEGKPTLPLIRA 247 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q+ K + I G E + + +++ AL + A +A +L Sbjct: 248 QQQLPAAGKQRLRDIIEAG--DREAIGEVIALLQATDALPYSRQAAERLAHEAVQALTAF 305 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS++K +L + +R Sbjct: 306 PDSAYKDALFSLAQRTTER 324 >gi|28198534|ref|NP_778848.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1] gi|71274823|ref|ZP_00651111.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon] gi|71902480|ref|ZP_00684417.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1] gi|170729932|ref|YP_001775365.1| trans-hexaprenyltranstransferase [Xylella fastidiosa M12] gi|182681213|ref|YP_001829373.1| polyprenyl synthetase [Xylella fastidiosa M23] gi|28056618|gb|AAO28497.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1] gi|71164555|gb|EAO14269.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon] gi|71727796|gb|EAO30052.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1] gi|167964725|gb|ACA11735.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa M12] gi|182631323|gb|ACB92099.1| Polyprenyl synthetase [Xylella fastidiosa M23] Length = 333 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 181/321 (56%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ DM ++ LI R+ SD+ +I + ++I SGGKRLRPMLT+ + Sbjct: 14 LPQIQSFAASDMAAIDTLIHDRLTSDIVLINQIADHIICSGGKRLRPMLTMLAGHAIGPT 73 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA IEFIHTATLLHDDVVD S LRR + A +WGN SVLVGDFL S++F + Sbjct: 74 GPHHHQLAAIIEFIHTATLLHDDVVDGSELRRSRSTANALWGNAPSVLVGDFLYSRSFQL 133 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + E ++ L+ ++EGE+ QL N D E YL VI+ KTA+LF+AA ++ Sbjct: 134 MTELANLEVMQILAETTNRISEGEVLQLLHVHNPDTDETTYLSVIERKTAILFAAAAQLG 193 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L + + + YGM LG AFQ+ DDVLDY +++GKN+G+D GK TLPVI Sbjct: 194 ALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGKNLGDDLAEGKATLPVIH 253 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + I+ G + + + +R +L + RA +Y A+ +L Sbjct: 254 AMTHSDAATCERLRMIISKG--DSDAMPEVLNAIRTTGSLDYSRQRASAYAATAERALDG 311 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP++ +L + + +QR Sbjct: 312 LPETEAVAALRGLARYAVQRT 332 >gi|237749261|ref|ZP_04579741.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13] gi|229380623|gb|EEO30714.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13] Length = 329 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 128/313 (40%), Positives = 183/313 (58%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME VN +I +++ S+V I + +YLI +GGKR+RP L L A Y+G H +L Sbjct: 17 IAPDMEGVNRIIREQLHSNVPFISQIAEYLINAGGKRIRPALVLLMARAFGYQGTQHQML 76 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A IEFIHTATLLHDDVVD++ LRRGK +A ++GN SVLVGDFL ++AF M++ Sbjct: 77 AAMIEFIHTATLLHDDVVDEADLRRGKSSANALFGNAASVLVGDFLYTRAFQMIVAVNDM 136 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L LS +AEGE+ QL +N + E+ Y+ VI +KTA LF + + +LIA Sbjct: 137 RILPVLSDATNLIAEGEVMQLVNVRNPAIDEKRYMEVIYAKTARLFEVSAVLGALIAHAS 196 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +A +YG +LGIAFQLVDD+LDY GE + +GK +G D R GK TLP+I + Sbjct: 197 EKEIEAAAAYGRSLGIAFQLVDDLLDYAGETDVLGKTVGNDLREGKMTLPLIFLMSHCDE 256 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I + +L ++ + AL T +A A +L CL DS +K Sbjct: 257 SIRKTIRECIENH--DEASLPFILEAVKASDALDYTARKAQDAANDAAQALSCLRDSQYK 314 Query: 308 KSLMEVVDFCLQR 320 ++L+++ F +R Sbjct: 315 ETLIKLSTFSAER 327 >gi|325918710|ref|ZP_08180807.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325918918|ref|ZP_08180989.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325534852|gb|EGD06777.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325535077|gb|EGD06976.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC 35937] Length = 332 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 127/322 (39%), Positives = 182/322 (56%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + Sbjct: 13 LPQIQSLAAPDMAAVDALIRRRLASDVVLINQIADHIISAGGKRLRPMLVMLAGHAAGGS 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E E ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELDRMEVMQILADTTNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +G V+Q L YGM LG AFQ+ DDVLDY E ++GKN+G+D GK TLP+I Sbjct: 193 ALASGADADVQQRLYDYGMQLGFAFQIADDVLDYAAEAEDLGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + ++ + G + + + + L + RA Y A+ +L Sbjct: 253 AMAHSDEATRQRLRAIVEQGDAA--AMPEVLAAIHATGGLDYSRQRAAEYAAAAEQALAT 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP S +L + + +QR + Sbjct: 311 LPASPAVAALRGLARYAVQRTH 332 >gi|228473247|ref|ZP_04058002.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624] gi|228275397|gb|EEK14189.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624] Length = 327 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 96/324 (29%), Positives = 176/324 (54%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58 ++ +++ ++M + S V ++ + Y++ GK++RPM A ++ Sbjct: 5 IEQIKEPIAQEMAAFEDKFRDSMSSRVALLNRITHYIVNRKGKQMRPMFVFLVAKLVSEG 64 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ Sbjct: 65 LVQERTYRGAAVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL 124 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 + I+ + L +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A Sbjct: 125 LLSIDNGDFDLLRIISVAVREMSEGELLQMEKARRLDITEEVYYEIIRQKTATLIAACCA 184 Query: 179 VSSL-IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + +A + V + ++ +G +G+AFQ+ DD+ DY +GK G D + K TLP Sbjct: 185 MGACSVAPENSQVIEQMRLFGEYVGMAFQIKDDLFDYT--EEAIGKPTGIDIKEQKMTLP 242 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 +I T++++++ ++I + + +K+ ++ + + T+ + Y KA Sbjct: 243 LIYTLNMVTEKDRHWLINSIKNHNTDKKRVKEVIAFVKAHGGIDYTQEKMKEYQAKALAI 302 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321 L PDS +KK+L+++V + ++R Sbjct: 303 LDRFPDSPYKKALLQIVTYVIERT 326 >gi|303258213|ref|ZP_07344220.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47] gi|302858966|gb|EFL82050.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47] Length = 326 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 110/320 (34%), Positives = 189/320 (59%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +D+ V+ ++ + SD+ +I + Y++ +GGKR+RP++ + A L Y+ Sbjct: 8 VQRIIAPISEDLLAVDREVIDDLQSDIPLIKKISDYIVTAGGKRMRPIVLMLIARALGYQ 67 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ LA IE++HTA+LLHDDVVD+S LRRGK A WGN ++L GDF+ S+AF + Sbjct: 68 GKEHIFLATMIEYVHTASLLHDDVVDESDLRRGKPTAGFKWGNAAAILTGDFMYSRAFQL 127 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ T++ E ++ ++EGE+ QL + + E Y VI+ KT VLF AA ++ Sbjct: 128 MVRTQNLRICEIVAGAVNRVSEGEVIQLLNIHDTTLDEARYFDVIERKTGVLFEAAARMA 187 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++AG V + Y + LG AFQ++DDVLDY G + +GKN+G D R GK T+P+I Sbjct: 188 SVVAGASKEVEDKMAEYALCLGRAFQIIDDVLDYTGTKDNIGKNLGTDLREGKMTMPLIY 247 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + ++ + ++ ++ +E++ + + + A+ A + D+L C Sbjct: 248 ALRHCSEEDAKIIRTAVSSNDPDLESVTRVIL---ASGAIDACIEAAKKEVSRGIDALNC 304 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S++K SL+E++ ++R Sbjct: 305 LPTSAFKNSLIELLSLTVER 324 >gi|218781076|ref|YP_002432394.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01] gi|218762460|gb|ACL04926.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01] Length = 325 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 116/319 (36%), Positives = 175/319 (54%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + + KD+ + + + ++++ DV +L+F+GGKRLRP+L + +A + Sbjct: 5 QEIFEFVEKDLADIERALEANLNPYLDLVRDVASHLLFAGGKRLRPVLMVLSARVCGCNN 64 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + L+ E++H ATLLHDD+VD + RRGK+AA VW VL GDFLLS+ + Sbjct: 65 GEEINLSTVFEYLHAATLLHDDIVDGAETRRGKIAAHKVWDPAEVVLTGDFLLSRTCTIA 124 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +T ++ ++ V ++EGE++QL K LD++EE Y+ VI KTAVL SAA EV + Sbjct: 125 ADTDKLPIIKVITNVTGVMSEGEIQQLLNKKRLDLSEEQYMDVIYRKTAVLISAACEVGA 184 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L+A +ALK YG +LGIAFQ+ DD+LDY + GK IG D GK TLP+I A Sbjct: 185 LLADAPPEQVEALKEYGRHLGIAFQMADDLLDYVADPKVTGKAIGADLAEGKLTLPLIHA 244 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++ + + I D S E+ + ++ + T +A + AK L Sbjct: 245 LEQTGSETRPRMEKIILDENASKEDFAFVLDNIIKSGGVDYTNQKAQEHVAAAKALLDIF 304 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PD K L +V DF QR Sbjct: 305 PDCPEKDVLAKVADFAAQR 323 >gi|116749021|ref|YP_845708.1| trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans MPOB] gi|116698085|gb|ABK17273.1| Trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans MPOB] Length = 323 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 123/319 (38%), Positives = 185/319 (57%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + D+ ++ I + + V +I V +Y++ SGGKRLRP+L + +A + Y+G Sbjct: 3 ESIISRIQPDLRRIEEEIELLLTTSVPLISVVGRYIMGSGGKRLRPLLLVLSARLCGYQG 62 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + LA EFIH A+LLHDDVVD + RR + AA VWGNQ VLVGDFL S+A + Sbjct: 63 SHDASLAVVFEFIHAASLLHDDVVDHAKFRRNRPAANTVWGNQAVVLVGDFLYSKAIHLT 122 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + S LE LS ++EGE+ QL + N++++EE+Y+ VI KTAVL SAA ++ + Sbjct: 123 VGYNSLRMLEVLSEATTRMSEGEVLQLVHADNIEISEEEYIEVITRKTAVLISAACQIGA 182 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 L G +ALK+YG NLGIAFQLVDD LDY G+V E+GK +G D + GK TLP+I A Sbjct: 183 LFGGNDVQREKALKTYGHNLGIAFQLVDDTLDYTGDVKELGKPVGNDIQEGKATLPLICA 242 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G ++ + + ++ E+ + ++ + L T A + Q AK +L Sbjct: 243 LRNGKPGDRARLREVFSSEQLRKEDFAEIKELVTRSGGLDYTLRLASRHIQTAKQALDIF 302 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + L ++ D+ + R Sbjct: 303 PPHPTRDLLSDIADYVICR 321 >gi|16126352|ref|NP_420916.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15] gi|13423600|gb|AAK24084.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15] Length = 338 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 150/317 (47%), Positives = 209/317 (65%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A + D+ Sbjct: 20 LVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGADNDH 79 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF +++E Sbjct: 80 FQKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVE 139 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 T S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E ++ Sbjct: 140 TNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVS 199 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AGV + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++LA Sbjct: 200 AGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLLAIA 259 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 R RE FW+ I + + + ++A ++ + AL T A Y KAK +L P Sbjct: 260 RSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPA 319 Query: 304 SSWKKSLMEVVDFCLQR 320 + W+++L E+ DF + R Sbjct: 320 NDWREALEELADFAVSR 336 >gi|163858538|ref|YP_001632836.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM 12804] gi|163262266|emb|CAP44569.1| putative octaprenyl-diphosphate synthase [Bordetella petrii] Length = 345 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 114/295 (38%), Positives = 179/295 (60%), Gaps = 2/295 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L DM +V+ LI R+ S V++I +VV++LI +GGKRLRPML + G Sbjct: 29 IQRLVASDMGQVDALIRGRLHSRVDLIVEVVEHLIAAGGKRLRPMLVILAGRACGGHGQG 88 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 LA IEFIHT+TLLHDDVVD+S++RRG+ A +WG+ +VLVGDFL S++F +++E Sbjct: 89 LHKLATIIEFIHTSTLLHDDVVDESSMRRGRSTANAIWGSLPAVLVGDFLYSRSFQLMVE 148 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S + ++ + LAEGE+ QL N DV E Y+ VIK KTAVLF+A+ +++ Sbjct: 149 LGSMQIMQIIGKTTNQLAEGEILQLLHVHNPDVDEAAYMQVIKHKTAVLFAASTTAGAIL 208 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG +++ ++ +G +LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I A Sbjct: 209 AGADRELQRRMEVFGEHLGYAFQITDDVLDYTADAEQLGKNLGDDLAEGKVTLPLIHAMN 268 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 ++N + + +G + ++ ++ A+ + RA+ + + A L Sbjct: 269 FSQGAQRNRLREIVQNGGMDAMDV--VMEAIQSTGAVDYSRRRAHEHARIAVSML 321 >gi|323704336|ref|ZP_08115915.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536402|gb|EGB26174.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 319 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 107/315 (33%), Positives = 181/315 (57%), Gaps = 3/315 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 + +DM+K++ IL + ++ I + L+ SGGKR+RP+L +A A M EY + + Sbjct: 6 EFVKEDMKKIDEFILANVKTNSPTIKKAIDDLVLSGGKRIRPLLVIAIARMGEYSEEKII 65 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 +A +IE +H ATL+HDD++DDS +RRG+ + + +G +T+V GDFL SQAF ++ + Sbjct: 66 PIAASIEIMHMATLIHDDIIDDSKMRRGQKSVQSKYGKETAVFTGDFLFSQAFNLIADII 125 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 S+E L+ ++ + EGE+ Q NLD++ + YL I KTA+LF+ + E + AG Sbjct: 126 SKENLKLIAKGVKAICEGEIEQFDNRYNLDLSIKKYLKRIYRKTALLFAISCESGASQAG 185 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + + +A++ +G+ +G AFQ+VDD+LDY G +GK +G D NG TLP+I A + Sbjct: 186 LPKEMIRAMRHFGLEIGTAFQIVDDILDYEGVERVVGKPLGSDLLNGIYTLPLIYALKTD 245 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 K+ K + +S ++ ++ + + + A Y +KA L +PD Sbjct: 246 RKK---VIKGILRKRDLSRRDVNCIIKEVKLSGGIDYAKELALKYVKKAVKYLEVIPDCE 302 Query: 306 WKKSLMEVVDFCLQR 320 K +M++ D L+R Sbjct: 303 QKSLMMDIADDVLKR 317 >gi|304570808|ref|YP_002517571.2| trans-isoprenyl diphosphate synthase [Caulobacter crescentus NA1000] Length = 336 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 150/317 (47%), Positives = 209/317 (65%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L L DM VN LI R+ SDV +IP + ++LI +GGKRLRP++T+A A + D+ Sbjct: 18 LVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGADNDH 77 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 LA A+EFIHTATLLHDDVVD S LRRGKVAA L+WG SVLVGDFL ++AF +++E Sbjct: 78 FQKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVE 137 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 T S +ALE L+ + +AEGE+ QL S +L++++ YL +I++KTA LF+AA E ++ Sbjct: 138 TNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVS 197 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AGV + +AL+ YG+NLG+AFQL DD LDY G +GKN G+DFR GK TLP++LA Sbjct: 198 AGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLLAIA 257 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 R RE FW+ I + + + ++A ++ + AL T A Y KAK +L P Sbjct: 258 RSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPA 317 Query: 304 SSWKKSLMEVVDFCLQR 320 + W+++L E+ DF + R Sbjct: 318 NDWREALEELADFAVSR 334 >gi|149371556|ref|ZP_01890972.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49] gi|149355183|gb|EDM43743.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49] Length = 325 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 105/325 (32%), Positives = 174/325 (53%), Gaps = 7/325 (2%) Query: 1 MKMLEDL---TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 MK + + K+ME + + S V ++ + Y++ GK++RPM A M Sbjct: 1 MKPVAKIKLPIEKEMELFEKKFRESMTSQVSLLNRITHYIVNRKGKQMRPMFVFLIAKMC 60 Query: 58 --EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 + A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS Sbjct: 61 DEGNVNERTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLS 120 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 + + I+ + L+ +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A Sbjct: 121 KGLLLSIDHGDFDLLKIISVAVREMSEGELLQIEKARRLDITEEIYFEIIRQKTATLIAA 180 Query: 176 ALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPT 235 + + + ++++G +G AFQ+ DD+ DY G+ +GK G D + K T Sbjct: 181 CCAMGAKSVNASEGQVENMRAFGELIGTAFQIKDDLFDY-GDTA-IGKPTGIDIKEQKMT 238 Query: 236 LPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAK 295 LP+I +++EK + +++ + + + +K+ ++EN L E SY QKA Sbjct: 239 LPLIYVLNNVSEKEKRWLINSVKNHNTNKKRVKEVITFVKENGGLDYAEQIMRSYQQKAL 298 Query: 296 DSLRCLPDSSWKKSLMEVVDFCLQR 320 L P+S +K SLM +V++ + R Sbjct: 299 LLLSDFPESPYKDSLMMMVNYVIDR 323 >gi|294671407|ref|ZP_06736256.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306884|gb|EFE48127.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 353 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 123/325 (37%), Positives = 195/325 (60%), Gaps = 8/325 (2%) Query: 3 MLEDL------TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MLE+L D+ +V+ +I + + S+V +I + Y+I +GGKRLRP++T+ + Sbjct: 30 MLENLPYFQQNLAADLGRVDVVINRAVQSEVALISQIGTYIISAGGKRLRPVITILSGRA 89 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 L D LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++ Sbjct: 90 LGCDNDGLYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTR 149 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++ + S + LE ++ +AEGE+ QL N+D+TE YL VI+ KTA LF AA Sbjct: 150 AFQLMVGSGSMKILEVMADATNIIAEGEVMQLMNIGNIDITEAQYLQVIQYKTAKLFEAA 209 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +V +++AG AL+ YGM +G AFQ++DDVLDY G+ ++GKN+G+D GKPTL Sbjct: 210 AQVGAILAGASAEQEAALRDYGMYVGTAFQIIDDVLDYSGDPEQIGKNVGDDLAEGKPTL 269 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 P+I +G++ ++ + + S +K + + AL +A + KA Sbjct: 270 PLIYLMNQGSQAAAADVRAALQNADRS--YFEKIHAHVAASDALSYCIEQAKAAAGKAAA 327 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRL 321 L LPD+ +++ ++ + + R+ Sbjct: 328 CLDVLPDNEATRAMRQLAEVSVARV 352 >gi|121593262|ref|YP_985158.1| dimethylallyltranstransferase [Acidovorax sp. JS42] gi|120605342|gb|ABM41082.1| Dimethylallyltranstransferase [Acidovorax sp. JS42] Length = 327 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 135/302 (44%), Positives = 192/302 (63%), Gaps = 2/302 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +V+ +I R+ S V ++ V +Y+I +GGKRLRP L L T LEY+G+ Sbjct: 14 LIADDMREVDKVIAARLQSSVPLVGSVAQYIISAGGKRLRPALLLLTCGALEYKGEQRFN 73 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL +++F M++E S Sbjct: 74 LAAVVEFIHTATLLHDDVVDESTLRRGRPTANETFGNPASVLVGDFLHTRSFQMMVEAGS 133 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 L+ L+ +AEGE++QL + + + E YLHVI+SKTA LF A+ +++++AG Sbjct: 134 MRILQVLADATNVIAEGEVQQLMNTHDASLDEAGYLHVIRSKTAKLFEASARLAAILAGS 193 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QA YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I+A QRG+ Sbjct: 194 TPDIEQACADYGQALGTAFQVIDDVLDYDGDAQEMGKNLGDDLREGKVTLPLIIAMQRGS 253 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + ++ ++ I G S + L+ I+RE AL T A + + A D+ LP + + Sbjct: 254 QAQRELLRNVIETG--SADELQPVIAIIRETGALTATRDAAAAQARLAMDAAAKLPANPY 311 Query: 307 KK 308 K Sbjct: 312 TK 313 >gi|312795082|ref|YP_004028004.1| farnesyl pyrophosphate synthetase / Geranyltranstransferase / farnesyltransferase / Octaprenyl diphosphate synthase [Burkholderia rhizoxinica HKI 454] gi|312166857|emb|CBW73860.1| Farnesyl pyrophosphate synthetase (EC 2.5.1.1) / Geranyltranstransferase (EC 2.5.1.10) / Farnesyltransferase (EC 2.5.1.29) / Octaprenyl diphosphate synthase (EC 2.5.1.-) [Burkholderia rhizoxinica HKI 454] Length = 352 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 132/313 (42%), Positives = 182/313 (58%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DM++VN +I R+ SDV +I + +Y+I +GGKRLRP L L A L R L Sbjct: 40 IADDMQQVNRVIRTRLASDVVLINQIAEYIIGAGGKRLRPALLLLVANALGERSGQRHEL 99 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A IEFIHTATLLHDDVVD+S LRRGK A ++GN SVLVGDFL S+AF M++ + Sbjct: 100 AAVIEFIHTATLLHDDVVDESQLRRGKQTANALFGNAASVLVGDFLYSRAFQMMVACDNL 159 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ LS +AEGE+ QL + DV + Y+ VI+ KTA LF AA ++ ++IAG Sbjct: 160 RVMQILSDATNVIAEGEVLQLLNMHDPDVDQARYMQVIRYKTAKLFEAAAQLGAVIAGAP 219 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 ++ A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I + GT Sbjct: 220 PALEAAAAEFGRTIGTAFQIMDDWLDYTGTPESMGKNAGDDLREGKPTLPLIYLIEHGTA 279 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + E+ AL T A + Q A ++ PDS +K Sbjct: 280 EQAQLARDAIEHG--GTDRFDTIFTAINESGALEHTLRCAEAEAQAAARAIFSFPDSQFK 337 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + R Sbjct: 338 ESLLELCSYSASR 350 >gi|71897572|ref|ZP_00679817.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1] gi|71732475|gb|EAO34528.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1] Length = 333 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 181/321 (56%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ DM ++ LI R+ SD+ +I + ++I SGGKRLRPMLT+ + + Sbjct: 14 LPQIQSFAASDMAAIDTLIHDRLTSDIVLINQIADHIICSGGKRLRPMLTMLAGHAIGHT 73 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA IEFIHTATLLHDDVVD S LRR A +WGN SVLVGDFL S++F + Sbjct: 74 GPHHHQLAAIIEFIHTATLLHDDVVDGSELRRSSSTANALWGNAPSVLVGDFLYSRSFQL 133 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + E ++ L+ ++EGE+ QL N D E YL VI+ KTA+LF+AA ++ Sbjct: 134 MTELANLEVMQILAETTNRISEGEVLQLLHVHNPDTDETTYLSVIERKTAILFAAAAQLG 193 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L + + + YGM LG AFQ+ DDVLDY +++GKN+G+D GK TLPVI Sbjct: 194 ALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGKNLGDDLAEGKATLPVIH 253 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + I+ G + + + +R +L + RA +Y A+ +L Sbjct: 254 AMTHSDAATCERLRMIISKG--DSDAMPEVLNAIRTTGSLDYSRQRASAYAATAERALEG 311 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP++ +L + + +QR Sbjct: 312 LPETEAVAALRGLARYAVQRT 332 >gi|88803606|ref|ZP_01119131.1| polyprenyl synthetase [Polaribacter irgensii 23-P] gi|88780618|gb|EAR11798.1| polyprenyl synthetase [Polaribacter irgensii 23-P] Length = 325 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 98/315 (31%), Positives = 168/315 (53%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHV 65 +ME + S V ++ + Y++ GK++RPM A M+ + Sbjct: 11 IQNEMELFEEKFKDSMLSKVPLLNRITYYIVRRKGKQMRPMFVFLVAKMVSNGGFDERTY 70 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A +E IHTATL+HDD+VDDS +RR + +W N+ +VLVGDFLLS+ + I+ Sbjct: 71 RGAAVVELIHTATLVHDDIVDDSNMRRSFFSVNALWKNKIAVLVGDFLLSKGLLLSIDNN 130 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + L+ +S+ ++EGEL Q+ ++ LD+TE Y +I+ KTA L +A + + G Sbjct: 131 DFDLLKLISIAVREMSEGELLQIEKARKLDITEAIYFDIIRKKTATLIAACCGIGAASVG 190 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + ++ +G +GIAFQ+ DD+ DY ++GK G D + K TLP+I Sbjct: 191 ANQDCIRKMRKFGEYIGIAFQIKDDLFDY--SDAKIGKPTGIDIKEQKMTLPLIYTLNTC 248 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 +K+EK + ++I + +K+ ++++ + T + + QKA L+ PDS Sbjct: 249 SKKEKAWLINSIKKHNKDKKRVKEVIAFVKDHGGIAYTMTKMNEHKQKALALLQDFPDSE 308 Query: 306 WKKSLMEVVDFCLQR 320 +KKSL ++D+ ++R Sbjct: 309 YKKSLETMIDYVVER 323 >gi|121610836|ref|YP_998643.1| dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2] gi|121555476|gb|ABM59625.1| Dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2] Length = 342 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 125/302 (41%), Positives = 183/302 (60%), Gaps = 2/302 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM +V+ +I +R+ S+V ++ V +++I +GGKRLRP L L L Y G + + Sbjct: 29 LVADDMREVDKVIGQRLLSNVPLVDWVARHIIAAGGKRLRPALLLMVCGALGYGGAHRLS 88 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +E IHTATLLHDDVVD S LRRG+ A ++G VLVGDFL +++F ++ET + Sbjct: 89 LAAVVELIHTATLLHDDVVDASTLRRGRPTANEIFGAPACVLVGDFLHTRSFQTMVETGN 148 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E L+ +AEGE+ QL + + E YL VI+SKTA LF A+ + +++A Sbjct: 149 MRVMEILAEATNVIAEGEVLQLMNMHDATLDEAGYLRVIRSKTAKLFEASARLGAVLARS 208 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + QA +YG LG AFQ++DDVLDY G+ EMGKN+G+D R GK TLP+I A QRG+ Sbjct: 209 SPDIEQACATYGQALGTAFQIIDDVLDYDGDSAEMGKNLGDDLREGKATLPLIAAMQRGS 268 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 + + I +G S E L + I+R AL T A + ++A + + LP +++ Sbjct: 269 PGQALIVRQAIKEG--STEQLAEIVGIVRATGALEVTRAAACTEARRAMSAAQQLPSNAY 326 Query: 307 KK 308 K Sbjct: 327 SK 328 >gi|258592999|emb|CBE69310.1| Polyprenyl synthetase [NC10 bacterium 'Dutch sediment'] Length = 325 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 117/320 (36%), Positives = 188/320 (58%), Gaps = 1/320 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + ++ V +L+ I DVE+I ++++Y++ SGGKR+RP L L +A + Y G Sbjct: 4 ETILSPVAPELALVEERLLQDISGDVELISEIIRYVLKSGGKRVRPALLLLSAKLCGYNG 63 Query: 62 -DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 H+ LA E++H ATL+HDD++D + RRG +A WG+Q SVL GDFL +++ M Sbjct: 64 GSRHIDLAVVAEYMHAATLIHDDIIDRADKRRGLPSANSTWGSQISVLAGDFLYARSLQM 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + A + + EG++R++ ++ NLD+T ++YL +I SKTA L S A Sbjct: 124 LVIDGDLAVMRAFADATVRMIEGQVREVQMAGNLDLTYDEYLDIITSKTAALISVACRTG 183 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +LIAG Q AL +G+++GIAFQLVDD LD+ E + +GK +G DF+ GK T P++ Sbjct: 184 ALIAGRQPEEVAALTEFGLDVGIAFQLVDDALDFVAEEDRLGKPVGNDFKEGKVTFPMLH 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G++ ++ + I +L + I+ RA+ T +Y +KAK SL Sbjct: 244 VMRAGSEADQGRIRELAAQESIGESDLVEVKAIVERYRAVPATMELVRTYLKKAKASLSI 303 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PDS+ K+SL+ +VDF R Sbjct: 304 FPDSAAKRSLVLMVDFVGDR 323 >gi|222109984|ref|YP_002552248.1| polyprenyl synthetase [Acidovorax ebreus TPSY] gi|221729428|gb|ACM32248.1| Polyprenyl synthetase [Acidovorax ebreus TPSY] Length = 327 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 134/302 (44%), Positives = 189/302 (62%), Gaps = 2/302 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM++V+ +I R+ S V ++ +V +Y+I +GGKRLRP L L + L Y G Sbjct: 14 LIADDMQEVDKVIASRLQSAVPLVGEVARYIISAGGKRLRPALLLLMSGALGYTGSQRFN 73 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL ++AF M++ET S Sbjct: 74 LAAVVEFIHTATLLHDDVVDESTLRRGRPTANENFGNPASVLVGDFLYTRAFQMMVETSS 133 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E L+ +AEGE++QL + + ++E YL+VI+SKTA LF A+ +++++A Sbjct: 134 LRVMEILAEATNVIAEGEVQQLMNTHDASLSESGYLNVIRSKTAKLFEASARLAAVLAAS 193 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + A SYG LG AFQ++DDVLDY G +EMGKN+G+D R GK TLP+I+A QRG Sbjct: 194 PPEIEHACASYGQALGTAFQVIDDVLDYDGNAHEMGKNLGDDLREGKVTLPLIIAMQRGN 253 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +E+ +S I G S + L I+++ AL T A + Q A D+ LP + Sbjct: 254 TQEQALLRSIIETG--STDELSSVISIIKKTGALDATRQAAATQAQLAMDAAAQLPINPH 311 Query: 307 KK 308 K Sbjct: 312 SK 313 >gi|332528440|ref|ZP_08404432.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624] gi|332042119|gb|EGI78453.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624] Length = 316 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 135/314 (42%), Positives = 191/314 (60%), Gaps = 5/314 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M +V+ +I +R+ S V ++ V +Y+I +GGKRLRP L L + L+YRG + LA + Sbjct: 1 MREVDRVISERLDSGVPLVGQVARYIIGAGGKRLRPALLLLVSGALDYRGPHRHSLAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVDDS LRRG A +GN SVLVGDFL S+AF M++E +S +E Sbjct: 61 EFIHTATLLHDDVVDDSKLRRGNPTANETFGNAASVLVGDFLYSRAFQMMVEAQSMRVME 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ +AEGE++QL N D+ E Y+HVI+SKTA LF A+ +++AG ++ Sbjct: 121 VLAEATNVIAEGEVQQLMNMHNADLNEAGYVHVIRSKTAKLFEASARCGAILAGADKTLE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 A YG LG AFQ++DDVLDY G+ + MGK++G+D R GK TLP+I A QRGT+ E+ Sbjct: 181 AACADYGQALGTAFQVIDDVLDYAGDAHVMGKSLGDDLREGKATLPLIAAMQRGTESERQ 240 Query: 252 FWKSTINDGKISVEN-----LKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +S I G E L++ ++R AL A ++A +L+ L + Sbjct: 241 RIRSAIESGLGEDETRNAQVLQEVIAVVRRTGALEVARAAASREAERAIAALQGLSVNPH 300 Query: 307 KKSLMEVVDFCLQR 320 SL+++ L R Sbjct: 301 SASLVQLATQLLAR 314 >gi|89099139|ref|ZP_01172018.1| HepT [Bacillus sp. NRRL B-14911] gi|89086269|gb|EAR65391.1| HepT [Bacillus sp. NRRL B-14911] Length = 320 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 94/321 (29%), Positives = 174/321 (54%), Gaps = 6/321 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +KM+ D+ + + + + ++ ++ + +L+ +GGKR+RP+ L +A Y Sbjct: 3 LKMMYSFLDSDINIIEQSLEETVQAESPLLRNASMHLLQAGGKRIRPVFVLLSAKFGSYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 +A A+E IH A+L+HDDV+DD+ LRRGK + W N+T++ GD++ +++ + Sbjct: 63 ISEIKKVAVALELIHMASLVHDDVIDDAELRRGKPTIKAKWDNRTAMYTGDYIFAKSLEV 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + EA E L+ + GE+ Q+ D DYL IK KTA+L +A+ ++ Sbjct: 123 MTEIERPEAHEILAKTIVEVCVGEIEQIKDKYRFDQNLRDYLLRIKRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AGV S+ + L +G +G++FQ+ DD+LD+ G E+GK G D G TLPV+ Sbjct: 183 AVAAGVDESIHKKLYKFGYYVGMSFQITDDILDFTGTEKELGKPAGGDLLQGNITLPVLF 242 Query: 241 AFQRGTKREKNFWKSTIN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + +++ + + + + + ++K +++ + A+ + + Y KA L Sbjct: 243 AME-----DEDIRREIVKVNETMDRKEIEKVISLIKNSGAIERSFTVSNQYLSKALAVLD 297 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LP + KKSL ++ F +R Sbjct: 298 TLPQNRAKKSLRDIAKFIGKR 318 >gi|261854792|ref|YP_003262075.1| trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2] gi|261835261|gb|ACX95028.1| Trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2] Length = 325 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 122/308 (39%), Positives = 186/308 (60%), Gaps = 2/308 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + +L DM +VN +I ++ SDV +I + +Y+I +GGKR RPM+ + A L Sbjct: 6 VDQIRELAAPDMARVNTVIQAKLASDVALINQLSQYIIGAGGKRFRPMVLMLAAQALGGT 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 +A +E IHTATLLHDDVVD+S LRRG+ A ++GN SVL GDFL S+AF M Sbjct: 66 SPWAAQMAAVVELIHTATLLHDDVVDESTLRRGRDTANALFGNAASVLTGDFLYSRAFEM 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + + L+ +AEGE+ QL + DV+E+ Y+ VI KTA LF+AA +++ Sbjct: 126 MVEVQEPRVMAILAQATNRIAEGEVLQLMNMGDADVSEDRYVDVIVRKTATLFAAATQLA 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G V AL +YG++LG AFQL+DDVLDY G+ GK++G+D GKPTLP+I+ Sbjct: 186 AVLEGQPEEVEAALTAYGLHLGTAFQLIDDVLDYTGDEAHTGKHVGDDLAEGKPTLPLII 245 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A QRG + + I + +++ + AL T +RA + +AK ++ Sbjct: 246 AMQRGDEATVAMIRRAITEQDAR--DIEAICSAIEHTGALAYTAHRAQAEADRAKQAIAA 303 Query: 301 LPDSSWKK 308 +PDS +K+ Sbjct: 304 VPDSPFKE 311 >gi|331000286|ref|ZP_08323970.1| octaprenyl pyrophosphate synthetase [Parasutterella excrementihominis YIT 11859] gi|329572452|gb|EGG54105.1| octaprenyl pyrophosphate synthetase [Parasutterella excrementihominis YIT 11859] Length = 326 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 109/320 (34%), Positives = 187/320 (58%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ + +D+ V+ ++ + SD+ +I + Y++ +GGKR+RP++ + A L Y+ Sbjct: 8 VQRIIAPISEDLLAVDREVIDDLQSDIPLIKKISDYIVTAGGKRMRPIVLMLIARALGYQ 67 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H+ LA IE++HTA+LLHDDVVD+S LRRGK A WGN ++L GDF+ S+AF + Sbjct: 68 GKEHIFLATMIEYVHTASLLHDDVVDESDLRRGKPTAGFKWGNAPAILTGDFMYSRAFQL 127 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ T++ E ++ ++EGE+ QL + + E Y VI+ KT VLF AA ++ Sbjct: 128 MVRTQNLRICEIVAGAVNRVSEGEVIQLLNIHDTTLDEARYFDVIERKTGVLFEAAARMA 187 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 S++AG V + Y + LG AFQ++DDVLDY G +GKN+G D R GK T+P+I Sbjct: 188 SVVAGASKEVEDKMAEYALCLGRAFQIIDDVLDYTGTKVNIGKNLGTDLREGKMTMPLIY 247 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + ++ + ++ ++ +E++ + + + A+ + D+L C Sbjct: 248 ALRHCSEEDAKIIRTAVSSNDPDLESVTRVIL---ASGAIDACIEAGKKEVSRGIDALNC 304 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S++K SL+E++ ++R Sbjct: 305 LPTSAFKNSLIELLSLTVER 324 >gi|91785273|ref|YP_560479.1| octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400] gi|91689227|gb|ABE32427.1| Octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400] Length = 330 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 128/313 (40%), Positives = 178/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM++VN +I R+ SDV +I + +Y+I +GGKRLRP L L A L + L Sbjct: 18 IAEDMQQVNRVIRHRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGETTGHRHEL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 138 RVMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGSD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 AKTEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 258 EQSALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECAKQEAQAAAAAISSFPDSIFK 315 Query: 308 KSLMEVVDFCLQR 320 SL+E+ + R Sbjct: 316 DSLLELCSYSTAR 328 >gi|294501072|ref|YP_003564772.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium QM B1551] gi|294351009|gb|ADE71338.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium QM B1551] Length = 321 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 97/320 (30%), Positives = 168/320 (52%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +KM+ D+ + + + + +D +I D +L+ +GGKR+RP+ L A Y Sbjct: 3 LKMMYAFLNTDITLIEKELEQTVHTDETLITDASLHLLQAGGKRIRPVFVLLAAKFGHYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D +A A+E IH A+L+HDDV+DD+ RRGK + W N+ ++ GD++ ++A + Sbjct: 63 IDQIKHVAVALELIHMASLVHDDVIDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEV 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E K EA + LS L GE+ Q+ NL+ YL IK KTA+L +A+ ++ Sbjct: 123 MSEVKDVEAHKILSNTMVELTLGEIEQIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AG + + L +G +G++FQ+ DD+LD+ ++GK +G D G TLPV+ Sbjct: 183 AIAAGAPEDIHKRLFWFGYYVGMSFQITDDILDFISSEEQLGKPVGSDLLQGNITLPVLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + R+K + G E + + ++ + A+ + + Y QKA L Sbjct: 243 AIENAEFRDK--VEQLFERG-YEQELINEIISDIKSSNAIERSFEMSDRYLQKAMSILEE 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + KK+L ++ + +R Sbjct: 300 LPPNKAKKTLHQIAKYIGKR 319 >gi|295706420|ref|YP_003599495.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium DSM 319] gi|294804079|gb|ADF41145.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium DSM 319] Length = 321 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 96/320 (30%), Positives = 169/320 (52%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +KM+ D+ + + + + +D +I D +L+ +GGKR+RP+ L A Y Sbjct: 3 LKMMYAFLNTDITLIEKELEQTVHTDETLITDASLHLLQAGGKRIRPVFVLLAAKFGHYN 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D +A A+E IH A+L+HDDV+DD+ RRGK + W N+ ++ GD++ ++A + Sbjct: 63 IDQIKHVAVALELIHMASLVHDDVIDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEV 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E K EA + LS L GE+ Q+ NL+ YL IK KTA+L +A+ ++ Sbjct: 123 MSEVKDVEAHKILSNTMVELTLGEIEQIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AG + + L +G +G++FQ+ DD+LD+ ++GK +G D G TLPV+ Sbjct: 183 AIAAGAPEDIHKRLFWFGYYVGMSFQITDDILDFISSEEQLGKPVGSDLLQGNITLPVLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + R+K + + + E + + ++ + A+ + + Y QKA L Sbjct: 243 AIENAEFRDK---VEQLFEREYEQELINEIISDIKSSNAIERSFEMSDRYLQKAMSILEE 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + KK+L ++ + +R Sbjct: 300 LPPNKAKKTLHQIAKYIGKR 319 >gi|187925422|ref|YP_001897064.1| polyprenyl synthetase [Burkholderia phytofirmans PsJN] gi|187716616|gb|ACD17840.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN] Length = 330 Score = 275 bits (703), Expect = 8e-72, Method: Composition-based stats. Identities = 128/313 (40%), Positives = 179/313 (57%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM++VN +I R+ SDV +I + +Y+I +GGKRLRP L L A L + L Sbjct: 18 IAEDMQQVNRVIRHRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGETTGHRHEL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 138 RVMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGSD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 AKTEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 258 EQSALAREVIEQG--GTDRFDTIFEAITRSGALDHTLECAKKEAQAAAAAISSFPDSIFK 315 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + R Sbjct: 316 ESLLELCSYSTAR 328 >gi|313672526|ref|YP_004050637.1| polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312939282|gb|ADR18474.1| Polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 323 Score = 275 bits (703), Expect = 8e-72, Method: Composition-based stats. Identities = 107/317 (33%), Positives = 177/317 (55%), Gaps = 1/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 + L + + + K + SDVEM+ +V Y+ SGGKRLRP+ ++ + Y G+ Sbjct: 6 ITALVKDKLALLEEELKKNLDSDVEMVNEVAYYVFESGGKRLRPIFMFLSSGLGGYTGNR 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 V+L+ +E+IHTATLLHDDV+D + RRG+ +A +GN +VL GDFL S+AF +++ Sbjct: 66 DVILSGVVEYIHTATLLHDDVIDGAKFRRGRPSANQAFGNDITVLCGDFLYSRAFVNLVK 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + L+ A T++EGE+ QL + N +++ E+Y +I SKTAVLFSA E+ +++ Sbjct: 126 DGDPKVQMILANAAKTMSEGEVFQLVKTANFNLSFEEYNKIIFSKTAVLFSACCEIGAML 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 AG + + +G +G++FQ+ DD+LDY G+ + GK G D + GK TLP++L Sbjct: 186 AGFDGERVKMMAEFGKIVGLSFQMSDDILDYLGDPAKTGKKPGTDLKEGKMTLPMLLLRD 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + E K I ++ +M E SY + A+D L PD Sbjct: 246 LANESELMKMKDIIAS-DPDENDITYIIDLMERYDVKSKAESFVDSYTKSARDLLSSFPD 304 Query: 304 SSWKKSLMEVVDFCLQR 320 + ++++L + ++ + R Sbjct: 305 NEYRRALEFLSEYVILR 321 >gi|269468820|gb|EEZ80424.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster bacterium] Length = 323 Score = 275 bits (703), Expect = 8e-72, Method: Composition-based stats. Identities = 132/319 (41%), Positives = 196/319 (61%), Gaps = 2/319 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ L D++K + +++KR+ S+V +I + Y+I +GGKRLRP+L L A Y+G++ Sbjct: 7 IQKLLKSDLKKTDKVLIKRLSSNVALINQMSSYIINAGGKRLRPLLLLLCAKATGYQGNH 66 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 H L+A IE IHTATLLHDD+VD+SA RRGK A VWGN SVLVGDFL S+AF M++E Sbjct: 67 HHLMAVVIELIHTATLLHDDIVDESATRRGKDTANEVWGNAASVLVGDFLYSRAFEMMVE 126 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 S ++ LS ++AEGE+ QL +N +++E +Y +VI+ KTA LF A+ ++ ++ Sbjct: 127 PDSMRIMKILSKTTNSIAEGEVLQLLNCQNSELSEAEYFNVIERKTACLFQASTQIGGIL 186 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 + AL++YG++LG AFQ++DD LDY + MGK +G+D GK TLP+I A Sbjct: 187 SNADEKQELALRNYGLHLGNAFQIIDDALDYESDAQTMGKEVGDDLAEGKTTLPMICALS 246 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 R +E K+ IN+ S + K I+ A T +A AK SL L + Sbjct: 247 RTLGQEHELLKNAINNADNS--KIDKIIKILDSVNAFEYTHNKAQESADLAKKSLAILEE 304 Query: 304 SSWKKSLMEVVDFCLQRLN 322 S +K +L+ + D LQR + Sbjct: 305 SDYKNALVLLCDLSLQRKS 323 >gi|118602394|ref|YP_903609.1| dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567333|gb|ABL02138.1| Dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 323 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 142/323 (43%), Positives = 198/323 (61%), Gaps = 5/323 (1%) Query: 1 MKMLED---LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 MK L D L D++K + +++ R+ S+V +I + Y+I +GGKRLRP+L L A Sbjct: 1 MKSLSDIQSLLKLDLQKTDEILINRLSSNVALINQMGHYIIHAGGKRLRPLLLLLCARAT 60 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 EY+G +H L+A IE IHTATLLHDD+VD+S RRGK VWGN SVLVGDFL S+A Sbjct: 61 EYQGTHHYLMAVVIELIHTATLLHDDIVDESITRRGKDTVNEVWGNAPSVLVGDFLYSRA 120 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 F M+IE S + LS ++AEGE+ QL KN ++TE +Y VI+ KTA LF AA Sbjct: 121 FEMMIEPNSMYIIRILSKTTNSIAEGEVLQLLNCKNTELTETEYYAVIERKTACLFQAAT 180 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ L++GV + ALK YG++LG AFQ++DDVLDY V MGK +G+D GK TLP Sbjct: 181 QIGGLLSGVDKAQESALKDYGLHLGNAFQIIDDVLDYESNVKTMGKEVGDDLSEGKTTLP 240 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 +I A + + + IN S + + I++ +A T +A+ Q AK S Sbjct: 241 MIYALAHTSGDNRQLLEDAINQADNS--KIVQVIKILQSIKAFDYTRNQAHKSAQLAKQS 298 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L+ +PDS +K +L+ + D LQR Sbjct: 299 LKLIPDSDYKDALILLCDLSLQR 321 >gi|114705279|ref|ZP_01438187.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506] gi|114540064|gb|EAU43184.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506] Length = 338 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 162/322 (50%), Positives = 224/322 (69%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + LT +DM +VN LIL S VE+IP++ +LI SGGKRLRPMLT+A+AL Y Sbjct: 16 IDTIVTLTQRDMGRVNDLILSMAGSRVELIPEIANHLISSGGKRLRPMLTIASALAHGYE 75 Query: 61 -GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 GD HV LA ++EF+HTATLLHDDVVD+S LRRG+ AR +WGNQ SVLVGD+LL QAF Sbjct: 76 EGDAHVKLAASVEFMHTATLLHDDVVDESDLRRGRRTARTIWGNQASVLVGDYLLGQAFK 135 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 M+++ S AL LS + +AEGE+ QL+ +K + +E DYL V+ +KTA LF+AA EV Sbjct: 136 MMVDVGSMAALAILSDASAVIAEGEVWQLAAAKRMTTSEADYLSVVDAKTAALFAAAAEV 195 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +IAG R+A++ YG +LGI+FQL+DDVLDY G ++GKN G+DFR GK TLPVI Sbjct: 196 GPVIAGKSMREREAMRRYGRSLGISFQLIDDVLDYGGVATDLGKNTGDDFREGKITLPVI 255 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 LA++ G+ EK FW+S + +G+ L KA ++ + L T RA +YG +A ++ Sbjct: 256 LAYEAGSDEEKAFWRSAMEEGRNDDLALAKAVDLIDRHGTLKATIDRARAYGAEAYEAAA 315 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 LP S +++L++VV+FC+ R+ Sbjct: 316 SLPPSLAREALLDVVEFCVARI 337 >gi|307731052|ref|YP_003908276.1| polyprenyl synthetase [Burkholderia sp. CCGE1003] gi|323527410|ref|YP_004229563.1| polyprenyl synthetase [Burkholderia sp. CCGE1001] gi|307585587|gb|ADN58985.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003] gi|323384412|gb|ADX56503.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001] Length = 330 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 127/313 (40%), Positives = 179/313 (57%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM++VN +I R+ S+V +I + +Y+I +GGKRLRP L L A L + L Sbjct: 18 IAEDMQQVNRVIRHRLASEVMLINQISEYIISAGGKRLRPALLLLVAGALGETTGHRHEL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 138 RVMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGAD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 ARTEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 258 EQSALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECAKQEAQAAAAAISSFPDSIYK 315 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + R Sbjct: 316 ESLLELCSYSTAR 328 >gi|329893636|ref|ZP_08269770.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088] gi|328923563|gb|EGG30875.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088] Length = 320 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 124/322 (38%), Positives = 192/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M + + E VN LI++++ SDV ++ D+ +Y++ GGKR+RP+L L T L Sbjct: 1 MPLSIPVIANAFEDVNTLIVEQLRSDVGLVEDIGQYIVAGGGKRMRPLLALLTGAALGGI 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 H A IEF+HTATLLHDDVVD S+LRRG+ A +GN +SVLVGDF+ S+AF + Sbjct: 61 SQPHKHFAAVIEFLHTATLLHDDVVDVSSLRRGRPTANAAYGNASSVLVGDFIYSRAFQL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ L+ ++ +AEGE+ QL + + D TE Y VI++KTAVLF AA Sbjct: 121 LVNIGDMRILKDIADTTNRIAEGEVLQLVRAGDADTTETQYYEVIQAKTAVLFGAACYGG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L++G + L+ +G+NLGIAFQ+VDD+LDY+G+ MGKN+G+D GKPTLP+I Sbjct: 181 ALLSGASERKAEELREFGINLGIAFQIVDDILDYQGDPATMGKNLGDDLAEGKPTLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q ++ + ++ I + S+ L I++ + +L + RA + KA+ ++ Sbjct: 241 AIQTAKAQDADLIRTAITEKDKSL--LSDVVRIIQASGSLAYSRERALEFQHKAEQAISK 298 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP K +L + + R++ Sbjct: 299 LPAGQMKDALTALAQQAISRIH 320 >gi|255020838|ref|ZP_05292894.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC 51756] gi|254969629|gb|EET27135.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC 51756] Length = 322 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 121/314 (38%), Positives = 178/314 (56%), Gaps = 2/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 L DM+ VN +I ++I S V IP + YLI +GGKRLRP++ L A M RG + Sbjct: 9 LVEADMQAVNRVIHEQIQSGVPTIPAMGAYLINAGGKRLRPIILLLAARMGGERGPRPIP 68 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 LA +EFIH+ATLLHDDVVD S LRR A +WGN +VLVGDFL +++F M++E Sbjct: 69 LAAVVEFIHSATLLHDDVVDGSELRRNHATANQLWGNAAAVLVGDFLYARSFEMMVEDGD 128 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 + ++ +++GE+ QL + + D+ E Y VI +KTA LF AA + +++ + Sbjct: 129 MRIMATMAEATSVISQGEVAQLENADDPDLDAEAYFAVIAAKTAKLFEAAARIGAIVNAM 188 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + AL YG +G+AFQL+DD LDY+ E MGKN G+D +GK TLP I+A QR Sbjct: 189 EPEQELALARYGSLVGVAFQLMDDALDYQAEAATMGKNPGDDLVDGKATLPYIVAMQRAR 248 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 +++ ++ + D + E+L I+ A+ T A + A D LR Sbjct: 249 PQDREVLRAALGDDR--REHLPAVLEIIARTGAIDYTLQSARERAEAAVDCLRHFGPGPE 306 Query: 307 KKSLMEVVDFCLQR 320 + +L + F +QR Sbjct: 307 RDALEFLARFSVQR 320 >gi|319786423|ref|YP_004145898.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317464935|gb|ADV26667.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 335 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 120/311 (38%), Positives = 177/311 (56%), Gaps = 5/311 (1%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE---YRGDNHVLLACAI 71 V+ LI R+ SDV +I + ++++ +GGKRLRPML + +H LA I Sbjct: 27 VDSLIRNRLASDVVLINQIAEHIVSAGGKRLRPMLVVLAGQATATSLGTTADHHQLAAII 86 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F +++E E ++ Sbjct: 87 EFIHTSTLLHDDVVDESDLRRGRSTANAIWGNAASVLVGDFLYSRSFQLMVELDRMEVMQ 146 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ +AEGE+ QL +N D E YL VI+ KTAVLF+A + +L + + Sbjct: 147 ILADTTNRIAEGEVLQLLHVRNPDTDEAAYLRVIERKTAVLFAAGTRLGALASCADADTQ 206 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 QAL YGM LG AFQ+ DDVLDY + ++GKN+G+D GK TLP+I A + Sbjct: 207 QALYDYGMALGYAFQIADDVLDYTADAADLGKNLGDDLAEGKATLPLIHAITHSDPATRE 266 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + + +G S + + + L + RA Y +A+ +L LP S ++L Sbjct: 267 RLRQAVQEGDTS--AMPEVLAAIHATGGLEYSRKRAMDYAAEAEAALAGLPQSEALEALR 324 Query: 312 EVVDFCLQRLN 322 + + ++R + Sbjct: 325 GLARYAVERTH 335 >gi|170695309|ref|ZP_02886455.1| Polyprenyl synthetase [Burkholderia graminis C4D1M] gi|170139709|gb|EDT07891.1| Polyprenyl synthetase [Burkholderia graminis C4D1M] Length = 330 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 126/313 (40%), Positives = 181/313 (57%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM++VN +I R+ S+V +I + +Y+I +GGKRLRP L L A L + L Sbjct: 18 IAEDMQQVNRVIRHRLASEVMLINQISEYIISAGGKRLRPALLLLVAGALGETTGHRHEL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E L+ ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 138 RVMEILAEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGAD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + A +G +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 ARIEAAAAEFGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + + F + + AL T A Q A ++ PDS +K Sbjct: 258 EQSALAREAIEQG--GTDRFETIFEAITRSGALDHTLECAKQEAQAAAAAISSFPDSIYK 315 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + R Sbjct: 316 ESLLELCSYSTAR 328 >gi|149183310|ref|ZP_01861750.1| HepT [Bacillus sp. SG-1] gi|148848968|gb|EDL63178.1| HepT [Bacillus sp. SG-1] Length = 320 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 91/320 (28%), Positives = 173/320 (54%), Gaps = 6/320 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM+ D++ + + I S ++ + +L+ +GGKR+RP+ L +A +Y Sbjct: 4 KMIYSFLKADIDLIEKELKTAIDSRSPLLNEASLHLLSAGGKRIRPVFVLLSAKFGDYNI 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 ++ +A A+E IH+A+L+HDDV+DD+ LRRGK + W N+T++ GD++ +++ + Sbjct: 64 NSIKNVAVALELIHSASLVHDDVIDDADLRRGKPTIKSQWDNKTAMYTGDYIFARSLEYM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + +++A + LS L GE+ Q+ + +DYL IK KTA+L + + ++ + Sbjct: 124 TKIDNEDAHKILSNAIVELTVGEIEQIKDKYRFEQDLKDYLRRIKRKTALLIAVSCQLGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + AG + + L +G N+G++FQ+ DD+LD+ E+GK G D G TLPV+ A Sbjct: 184 IAAGAPPEIHKKLYRFGYNVGMSFQITDDILDFTASEEELGKPAGSDLLQGNITLPVLFA 243 Query: 242 FQRGTKREKNFWKSTIN-DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + +++ + I + ++ + LK ++ A+ + + Y +KA L Sbjct: 244 ME-----QRDLREKLIKIEEEVDRDYLKAVIEDIKSCGAIEQSHEISARYLKKAMKELEG 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + K+L ++ +F +R Sbjct: 299 LPKNGANKTLKDIANFIGKR 318 >gi|209522097|ref|ZP_03270748.1| Polyprenyl synthetase [Burkholderia sp. H160] gi|209497469|gb|EDZ97673.1| Polyprenyl synthetase [Burkholderia sp. H160] Length = 330 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 127/313 (40%), Positives = 179/313 (57%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM++VN +I +R+ SDV +I + +Y+I +GGKRLRP L L A L + L Sbjct: 18 ISEDMQQVNRVIRQRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGDTTGHRHEL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E L+ ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 138 RVMEILAEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGAD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 TKTEAAAAEYGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ P S +K Sbjct: 258 EQSALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECAKQEAQAAAAAISSFPHSIFK 315 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + R Sbjct: 316 ESLLELCSYSTAR 328 >gi|84489654|ref|YP_447886.1| IdsA [Methanosphaera stadtmanae DSM 3091] gi|84372973|gb|ABC57243.1| IdsA [Methanosphaera stadtmanae DSM 3091] Length = 327 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 95/331 (28%), Positives = 180/331 (54%), Gaps = 16/331 (4%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 M++L+ E+++ +I + + E + + +YLI +GGK+ RP LTL + + Sbjct: 4 MEILKAYA----EEIDVVIDDSLSKLEPESLYESSEYLIKAGGKKFRPALTLLSCQAVGG 59 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 + + + A AIE HT +L+HDD++D+ RRGK A VWG ++L GD L +++F Sbjct: 60 KPEKALKAAAAIELTHTFSLIHDDIMDNDDTRRGKPAVHKVWGEPLAILAGDSLFAKSFE 119 Query: 120 MVIET--------KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171 ++ ++ + +AL+ L+ + EG+ ++ +VT+++Y+++I KT Sbjct: 120 LLSQSAEDNIAYERVVDALQVLTNSCINICEGQALDMAFEDTFNVTKDEYMNMIYKKTGD 179 Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231 L +A+ + +++ G ++ QAL++YG +G+AFQ+ DD +D G+ +GK +G D Sbjct: 180 LITASTTIGAIMGGASSNEIQALRTYGKQIGLAFQIQDDYIDLTGD-ESIGKPVGSDLVE 238 Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYG 291 GK TL V+ A ++ K + + + S+ + +A I+ + A+ +AY Sbjct: 239 GKKTLMVVYALEKANKEDHDRLVELLEANDESI--IPEAMEILEKYGAINYARSKAYDCV 296 Query: 292 QKAKDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 ++K +L LPDS K +L ++ DF R + Sbjct: 297 IESKQALSILPDSDAKDALFKLADFVFTRKS 327 >gi|325286900|ref|YP_004262690.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489] gi|324322354|gb|ADY29819.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489] Length = 325 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 100/320 (31%), Positives = 173/320 (54%), Gaps = 4/320 (1%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYR 60 ++D K+ME + S V ++ + Y++ GK++RPM TA ++ Sbjct: 6 QIKDPVNKEMELFEKKFHASMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKLVSGGKV 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGDFLLS+ + Sbjct: 66 NERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSVNALWKNKIAVLVGDFLLSKGLLL 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 I+ + L+ +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A + Sbjct: 126 SIDNGDFDLLKIISVAVREMSEGELLQIEKARKLDITEDVYYEIIRQKTATLIAACCSLG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + + + +G +G+AFQ+ DD+ DY G+ +GK G D + K TLP+I Sbjct: 186 ACSVNPDSDDVETFRKFGELIGMAFQIKDDLFDY-GDEA-IGKPTGIDIKEQKMTLPLIY 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 TK+EK++ +++ + +K+ ++++ L E + S+ ++A L Sbjct: 244 TLNNCTKKEKSWLINSVKKHNKDKKRVKEVINFVKDSGGLAYAEEKMMSFKKEALALLSK 303 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P+S +K SL +V++ + R Sbjct: 304 YPESDYKSSLELMVNYVVDR 323 >gi|237756556|ref|ZP_04585080.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691284|gb|EEP60368.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium yellowstonense SS-5] Length = 317 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 107/311 (34%), Positives = 177/311 (56%), Gaps = 1/311 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-MLEYRGDNHVLLAC 69 D ++ + + S+V I V KY+I SGGKR+RP L L + M + +LA Sbjct: 5 DKAYFEKVMYQHLDSNVNFILQVGKYIIDSGGKRVRPYLVLKFSKIMKNKNEEKDYILAA 64 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+E++HTA+LLHDDVVD S LRRGK A ++GN T+VL GD++ + A + + Sbjct: 65 ALEYLHTASLLHDDVVDGSQLRRGKPTANRIFGNDTTVLTGDYMYANALYLFSTHGDIDM 124 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ +S +AEG+L +L + D+T ++Y +++ KTA LF + V + + + Sbjct: 125 IKNVSQTVKKMAEGQLLELKKIADFDITLQEYYSILEGKTAALFGSCCYVGTALGTDNET 184 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++Q YG+N+G+AFQ+VDD+LDY G+ + GK+I D R GK T P+I ++ + +E Sbjct: 185 LKQKAFEYGLNIGMAFQIVDDLLDYTGKEEKTGKSIMNDLREGKITYPLIAVREKLSAKE 244 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 K F KS + + E+L K I+ + +T+ +A + KA ++LR +S + Sbjct: 245 KEFIKSVLLNKNPDTEDLIKVKNIVESYGGIEETKQKAKDFVDKAIENLRVFGNSEDVEE 304 Query: 310 LMEVVDFCLQR 320 L + F ++R Sbjct: 305 LESLAKFIIER 315 >gi|254516949|ref|ZP_05129007.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3] gi|219674454|gb|EED30822.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3] Length = 320 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 119/305 (39%), Positives = 185/305 (60%), Gaps = 2/305 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ + + +++ VN +I++++ SDV+M+ +V +Y++ +GGKRLRP+L L ++ L Sbjct: 1 MQQVRAVVSAELDAVNAVIIEQLRSDVDMVENVGQYIVDAGGKRLRPVLVLLSSAALGPI 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D + A +EFIHTATLLHDDVVD S LRRG+ A +GN SVLVGDFL ++AF + Sbjct: 61 SDAQIHFAAVVEFIHTATLLHDDVVDVSELRRGRPTANSAFGNAPSVLVGDFLYTRAFQL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + L+ ++ T+A GE+ QL + + +EE Y VI KTA LF+A E + Sbjct: 121 MVALGNHDVLKMMADTTNTIAAGEVLQLIRAGDAATSEEQYYDVIDRKTAALFAAGCEGA 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+AG + + L+ G ++GIAFQL+DD+LDY G+ GKN+G+D GKPTLP+I Sbjct: 181 ALLAGADAARVEQLRVCGRSIGIAFQLIDDLLDYEGDPEVTGKNVGDDLAEGKPTLPLIH 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + G++ + N + IN L + +R+ +L T A KA +L+ Sbjct: 241 VMREGSEAQANLVRDAIN--AKDRARLPEIIQAVRDCGSLEYTRNAALDCRDKALKALKE 298 Query: 301 LPDSS 305 LPDS Sbjct: 299 LPDSP 303 >gi|225874396|ref|YP_002755855.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC 51196] gi|225794389|gb|ACO34479.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC 51196] Length = 329 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 103/319 (32%), Positives = 172/319 (53%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K + DL D+ ++ S V++I ++ +YL GGKR+RP+L L +A YRG Sbjct: 10 KEIFDLLHDDLLEIEREFETAAVSRVQVITEIAEYLREGGGKRIRPLLLLLSARSQSYRG 69 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 L +E +HTATL+HDD++D + +RRG+ + WGN VL GD+L QAF + Sbjct: 70 AGATRLGAVVEMVHTATLVHDDIIDAADMRRGRPSPNTTWGNAKCVLAGDWLYMQAFRVA 129 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++ ++ L+ L + + EGEL QL V ++Y +I KTA LF ++ + + Sbjct: 130 LDERNFRVLDLLIGLTQQMVEGELMQLETLGRQ-VNSQEYYDLIYRKTACLFEVSMRLGA 188 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A ++ + + YG NLG+AFQ+VDDVLD +GK + D R GK T+ VI A Sbjct: 189 VLAKATDAEEECMGEYGRNLGLAFQIVDDVLDLTATEEVLGKPVASDLREGKATMAVIHA 248 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + G E+ + + D + + ++ N ++ A+ Y + A+ +L L Sbjct: 249 LENGGAEERAAILTVLEDQNFERVSHDQILAALKRNGSVEYAMNTAFEYAEAARQALSFL 308 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S +K++L+ V D+ + R Sbjct: 309 PESDYKRALLWVPDYVVAR 327 >gi|91786742|ref|YP_547694.1| trans-hexaprenyltranstransferase [Polaromonas sp. JS666] gi|91695967|gb|ABE42796.1| Trans-hexaprenyltranstransferase [Polaromonas sp. JS666] Length = 327 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 134/311 (43%), Positives = 194/311 (62%), Gaps = 2/311 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M ++ +I +R+ SDV ++ V +Y++ +GGKRLRP L L L YRGD LA + Sbjct: 19 MRGMDAVIERRLKSDVPLVSQVSQYIVAAGGKRLRPALLLLMCGALGYRGDQRYNLAAVV 78 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M++E ++ Sbjct: 79 EFIHTATLLHDDVVDESTLRRGRATANEAFGNPASVLVGDFLYSRAFQMMVEAGDMRVMQ 138 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ +AEGE+ QL + ++E+ YL VI+SKTA LF A+ +++L+A V Sbjct: 139 TLAEATNVIAEGEVLQLMNMHDATLSEDGYLRVIRSKTAKLFEASARLAALLAQSPPPVE 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 Q+ YG LG AFQ++DDVLDY G+V+EMGKN+G+D R GK TLP+I+A QR T+ E+ Sbjct: 199 QSCADYGQALGTAFQVIDDVLDYDGDVSEMGKNLGDDLREGKTTLPLIIAMQRCTELERA 258 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G + + + I+++ AL T A + Q+A D+L+ LP + + +L Sbjct: 259 VIRRAIETG--GTDQMPQIIAIVQQTGALQATRDAAAAEAQRALDALQVLPQNPYSNALG 316 Query: 312 EVVDFCLQRLN 322 + LQR + Sbjct: 317 HLASQLLQRRS 327 >gi|134300012|ref|YP_001113508.1| trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1] gi|134052712|gb|ABO50683.1| Trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1] Length = 320 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 99/320 (30%), Positives = 171/320 (53%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M KD++ V I + S ++ +L+ +GGKRLRP L Y Sbjct: 1 MLDFFSQVRKDLQVVEHEIKTIVQSRDPLLTQTSIHLLNAGGKRLRPAFALLAGKFYHYS 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + + LA A+E IH ATL+HDDVVDDS RRG + WGN+ S+ GD+L +++ + Sbjct: 61 LEKLLPLAVALELIHMATLVHDDVVDDSLTRRGTPTVKANWGNRISMHTGDYLFAKSLVL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + ++ + L+ + + EGE+ Q+S + + + + DY + IK KTA+L +A+ ++ Sbjct: 121 ISQYENPLIAQVLADTSVMMCEGEMHQISTAYSAEQSWRDYFYRIKRKTALLIAASCQLG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G + L+ YG +LG+AFQ+ DD+LD + + +GK IG D R G T+PVI Sbjct: 181 AVAVGAPEEEYKNLRRYGHHLGMAFQITDDILDMVADQSLLGKPIGGDLRQGILTMPVIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + +R ++ + + + + E +K+A I++E + Y +KAK +L Sbjct: 241 SLERSP--QRTRLRQLVEIEEKTDEQVKEAIEIIKEAGGIEYAFNATKQYIEKAKKNLTH 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+ K++ ++ DF R Sbjct: 299 LPNKPVKETFYQIADFIGIR 318 >gi|332286668|ref|YP_004418579.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7] gi|330430621|gb|AEC21955.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7] Length = 308 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 132/309 (42%), Positives = 193/309 (62%), Gaps = 3/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M+ V+ +I R+ SDV +I + Y++ +GGKR+RP + L A L Y+G NH LLA + Sbjct: 1 MKAVDAVIRARLNSDVVLIRTIGDYIVGAGGKRMRPAMLLMMANALGYQGGNHHLLAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A V+GN SVLVGD+L S++F M++++ S A+ Sbjct: 61 EFIHTATLLHDDVVDESDLRRGRSTANAVFGNAASVLVGDYLYSRSFEMMVQSGSMPAMS 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS +AEGE+ QL + DV+ + YL V++ KTA LF AA +V ++I G Sbjct: 121 VLSAATTVIAEGEVLQLLNVHDPDVSLDRYLQVVRYKTAKLFEAATQVGAIIGGATTEQE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 A +YG ++G AFQL+DDVLDY G +GKN+G+D R GKPT+P+I + GT ++K Sbjct: 181 AAAAAYGRHIGTAFQLIDDVLDYSGGAEALGKNVGDDLREGKPTMPLIRVMEVGTGQQKQ 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G + +A +++ +AL T A + A+++L LP S +KSL+ Sbjct: 241 LIQDAIRTGDADFAAVARA---IQDTQALDYTRQAAIAEAALAREALAVLPVSVHQKSLL 297 Query: 312 EVVDFCLQR 320 E F ++R Sbjct: 298 EFCSFAVER 306 >gi|326336630|ref|ZP_08202798.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691100|gb|EGD33071.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 327 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 94/324 (29%), Positives = 179/324 (55%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58 ++ +++ ++M + + S V ++ + Y++ GK++RPM A ++ Sbjct: 5 IEQIKEPIAQEMATFEDKFRQSMSSRVALLNRITHYIVNRKGKQMRPMFVFLVAKLISNG 64 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ Sbjct: 65 IINERTYRGAAVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL 124 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 + I+ + L+ +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A Sbjct: 125 LLSIDNNDFDLLKIISVAVREMSEGELLQMEKARRLDITEEVYYEIIRQKTATLIAACCA 184 Query: 179 VSSL-IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + + +A ++ + ++ +G +G+AFQ+ DD+ DY +GK G D + K TLP Sbjct: 185 MGACSVAPENTTLIEKMRLFGECVGMAFQIKDDLFDYT--EEAIGKPTGIDIKEQKMTLP 242 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 +I ++++++ ++I + + +K+ ++ + + T+ + +Y +KA Sbjct: 243 LIYVLNTVKEKDRHWLINSIKNYNTDKKRVKEVIAFVKAHGGIERTQEKMRAYQRKALAI 302 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRL 321 L P S +KK+L+++VD+ ++R Sbjct: 303 LDDFPASPFKKALLQIVDYVIERT 326 >gi|154686522|ref|YP_001421683.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus amyloliquefaciens FZB42] gi|154352373|gb|ABS74452.1| HepT [Bacillus amyloliquefaciens FZB42] Length = 349 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 88/319 (27%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y Sbjct: 33 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 92 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+ Sbjct: 93 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 152 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +A LS + GE+ Q+ N++ YL IK KTA+L + + ++ + Sbjct: 153 TRLDEPKAHRILSKTIVEVCLGEIEQIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 212 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+ A Sbjct: 213 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYA 272 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++ KN K + + + + E L ++ A+ + + Y +KA + L L Sbjct: 273 LRQ--PELKNQLK--LINSETTQEQLAPIIENIKRTDAIEKSMAVSDRYLKKAFEKLNTL 328 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + SL + + +R Sbjct: 329 PRGRARSSLAAIAKYIGKR 347 >gi|328953238|ref|YP_004370572.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM 11109] gi|328453562|gb|AEB09391.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM 11109] Length = 325 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 115/320 (35%), Positives = 182/320 (56%), Gaps = 1/320 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM+ D++++N + + + V +I +V +++ SGGKR+RP+L + A M RG Sbjct: 6 KMILQRLQPDIDRINLALSGNLATHVRLISEVWDHILISGGKRIRPLLFILAARMCGCRG 65 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D+ + E++H ATLLHDDVVD + RRG+ +A +WGNQ +LVGDFLLS+A + Sbjct: 66 DHLPDIGAIFEYLHAATLLHDDVVDAATERRGQSSANTIWGNQAVILVGDFLLSKALSIA 125 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +ET+ +E L+ +AEGE+ QL + L++TEE+Y VI KTA L SAA ++ + Sbjct: 126 VETRQIRIIEVLAQTTTYMAEGEVLQLVNTGRLEMTEEEYFDVITRKTAKLMSAACQIGA 185 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ GV + A+ +G+NLGI FQL+DD+LD+ G EMGK I D + GK TLP I Sbjct: 186 ILGGVDGRLEAAMADFGLNLGITFQLIDDILDFTGNAKEMGKPICNDLKEGKITLPFIHT 245 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++ E+ + + + ++ +M+ + ++ A Y AK++L Sbjct: 246 LRQLGPTEQQSLGHLVRESDAAR-IAQELLPLMQRHGSIDYARRLAQEYTNAAKENLALF 304 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 P S K +EV D + R Sbjct: 305 PSSPEKSLFLEVTDILVNRT 324 >gi|188996355|ref|YP_001930606.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931422|gb|ACD66052.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 317 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 109/311 (35%), Positives = 178/311 (57%), Gaps = 1/311 (0%) Query: 11 DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL-MLEYRGDNHVLLAC 69 D ++ + + S+V I V KY+I SGGKR+RP L L + M + +LA Sbjct: 5 DKAYFEKVMYQHLDSNVNFILQVGKYIIDSGGKRVRPYLVLKFSKIMKNKNEEKDYILAA 64 Query: 70 AIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEA 129 A+E++HTA+LLHDDVVD S LRRGK A ++GN T+VL GD+L + A + + + Sbjct: 65 ALEYLHTASLLHDDVVDGSQLRRGKPTANRIFGNDTTVLTGDYLYANALYLFSIHGNIDM 124 Query: 130 LEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNS 189 ++ +S +AEG+L +L + D+T ++Y +++ KTA LF + V + + + Sbjct: 125 IKNVSQTVKKMAEGQLLELKKIADFDITLQEYYSILEGKTAALFGSCCYVGTALGTDNET 184 Query: 190 VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKRE 249 ++Q YG+N+G+AFQ+VDD+LDY G+ + GK+I D R GK T P+I ++ + +E Sbjct: 185 LKQKAFEYGLNIGMAFQIVDDLLDYTGKEEKTGKSIMNDLREGKITYPLIAVREKLSAKE 244 Query: 250 KNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKS 309 K F KS + + E+L K I+ + +T+ +A + KA +SLR +S + Sbjct: 245 KEFIKSVLLNKNPDTEDLLKVKNIVESYGGIEETKQKAKDFVDKAIESLRVFGNSEDVEE 304 Query: 310 LMEVVDFCLQR 320 L + F ++R Sbjct: 305 LESLAKFIIER 315 >gi|260063737|ref|YP_003196817.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501] gi|88783182|gb|EAR14355.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501] Length = 325 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 95/319 (29%), Positives = 171/319 (53%), Gaps = 4/319 (1%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRG 61 + + K+ME + + S V ++ + Y++ GK++RPM TA +L Sbjct: 7 IREPIDKEMELFEKKFHQSMSSKVPLLNRITYYIVNRKGKQMRPMFVFLTAKLLNEGQVN 66 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + A IE IHTA+L+HDDVVD+S RRG + +W N+ +VLVGDFLL++ + Sbjct: 67 ERTYRGASVIELIHTASLVHDDVVDESFKRRGFFSINALWKNKIAVLVGDFLLARGMLLS 126 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++ + L +S ++EGEL QL ++ LD+TEE Y +I+ KTA L +A + + Sbjct: 127 VDNGDFDLLRIISAAMREISEGELLQLEKARRLDITEEVYYEIIRQKTATLIAACCSLGA 186 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + + +G G+AFQ+ DD+ DY N +GK G D + K TLP+I A Sbjct: 187 ASVRPDSEYVEMFRKFGERCGMAFQIKDDLFDY--GENRIGKPTGIDIKEQKMTLPLIYA 244 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++R++ + +++ + + +++ ++ + L E R + Q+A + L+ Sbjct: 245 LNSASERDRKWLINSVKNYNTDKKRVREVIDFVKSSGGLEYAEGRMQEFKQEALEMLKPF 304 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P SS++++L +V++ + R Sbjct: 305 PQSSYREALELMVNYVVDR 323 >gi|124494424|gb|ABN13312.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] Length = 348 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 89/319 (27%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y Sbjct: 32 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 91 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+ Sbjct: 92 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 151 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +A LS + GE+ Q+ N++ YL IK KTA+L + + ++ + Sbjct: 152 TRINEPKAHRILSQTIVEVCLGEIEQIKGKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 211 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+ A Sbjct: 212 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYA 271 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + KN K + + + + E L+ +++ A+ + + Y QKA + L L Sbjct: 272 LE--NPALKNQLK--LINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFEKLNTL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + SL + + +R Sbjct: 328 PRGRARSSLAAIAKYIGKR 346 >gi|78042835|ref|YP_360049.1| heptaprenyl diphosphate synthase component II [Carboxydothermus hydrogenoformans Z-2901] gi|77994950|gb|ABB13849.1| heptaprenyl diphosphate synthase component II [Carboxydothermus hydrogenoformans Z-2901] Length = 326 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 110/319 (34%), Positives = 185/319 (57%), Gaps = 3/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K L +L +D+ K+ ++K + E + D +L+ +GGKRLRP L A + +Y Sbjct: 9 KKLFELVKEDLRKIEQELIKEVSERNEFLHDPAMHLLKAGGKRLRPAFALLAAKLGDYDF 68 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + LA A+E IH ATL+HDDVVD+S LRRG + WGN+ S+ +GD + +++ ++ Sbjct: 69 EKVKPLAVALELIHMATLVHDDVVDNSMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLI 128 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 K+ + L+ V+ + GE++QL+ +KN+ + +DYL IK KTA+L SA+ E+ Sbjct: 129 DSCKNNYVAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCELGG 188 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A V V ALK YG+ +G+AFQ++DD+LD+ + +GK +G D R G TLPV+LA Sbjct: 189 VMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLA 248 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 +R K E W+ + + + N+++ ++ + + A +Y +KA + + Sbjct: 249 LKRDKKHE--LWRE-LQNLPQNNANIEQIIKEIKYLGGISEAYAWAKNYIEKAISAFELV 305 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P S K + +E+ F +QR Sbjct: 306 PKSPVKDTFLEIAQFIVQR 324 >gi|308270513|emb|CBX27125.1| hypothetical protein N47_A11540 [uncultured Desulfobacterium sp.] Length = 326 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 109/326 (33%), Positives = 186/326 (57%), Gaps = 4/326 (1%) Query: 1 MKMLE----DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56 MK L+ + KD+ ++ + + ++++ DV K+++F+GGKRLRP+L + +A + Sbjct: 1 MKDLKQELLSIVGKDLAEIEVALTDNLTPYLDIVSDVAKHILFAGGKRLRPLLMVLSARI 60 Query: 57 LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 Y+G + + E++H ATLLHDDV+D + LRRGK A +W N T VL GDFLL++ Sbjct: 61 CNYKGGYDKVFSTIFEYLHAATLLHDDVIDGAELRRGKPVANSIWKNSTVVLTGDFLLAR 120 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 + T+ ++ ++ + +++GE+ QL ++++TEE+Y +I KTAVLF A Sbjct: 121 GLSIAAATEKPSVIKIVAEITENMSQGEIEQLLRKGDINLTEEEYRKIIWRKTAVLFQGA 180 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 +S+ +A +A+ +YG NLG+AFQ+ DD+LDY + +GK +G D + GK TL Sbjct: 181 CRISARLANASKREEKAVSNYGYNLGMAFQMADDLLDYTLDTKVIGKGVGADLKEGKVTL 240 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 PVI A + +++ + I + K SV N ++ + + TE A + ++AK+ Sbjct: 241 PVIHALKEADSKDRLKMERIIKNNKFSVRNFNSLIKLLEKYEGISYTEKCAKDHIKEAKE 300 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 SL S + L + D+ L R + Sbjct: 301 SLLVFEPSETRNILEYIADYTLLRKS 326 >gi|27262424|gb|AAN87493.1| Farnesyl pyrophosphate synthetase [Heliobacillus mobilis] gi|111075007|gb|ABH04860.1| polyprenyl diphosphate synthase [Heliobacillus mobilis] gi|155241755|gb|ABT18037.1| heptaprenyl diphosphate synthase [Heliobacillus mobilis] Length = 320 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 104/318 (32%), Positives = 171/318 (53%), Gaps = 3/318 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L D+ KV + K + + + +L+ +GGKRLRP L Y + Sbjct: 5 LFQDIQNDLAKVEAELAKYADTSLPTLTAASSHLLHAGGKRLRPAFVLLAGRFHNYSLER 64 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + LA A+E IH A+L+HDDVVD+S RRG + WGN+ S+ GD L +++ ++ E Sbjct: 65 LLPLAVAMEMIHMASLVHDDVVDESKTRRGIPTVKARWGNRISIHTGDHLFARSLLLIAE 124 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + E L+ V+ + +GE++Q+S + +++ T DYL IK KTA+L SA+ ++ ++ Sbjct: 125 LNDDKISEVLAKVSVEMCKGEIQQMSGTFDVNQTFRDYLFHIKRKTALLISASCQLGAMA 184 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 S+ +ALK YG +LG+AFQ+ DD+LD + E+GK +G D R G TLP++ A Sbjct: 185 VKADPSIVRALKMYGHHLGMAFQVTDDILDLTADEAELGKPVGSDLRQGIITLPILEALW 244 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 + + S E + +A I++ + A+ ++ A Y +KAKD L+ LP Sbjct: 245 ETKD---PLLRLLVAKRDKSQEEVGQAIEIIKNSGAIDRSQKIARRYLEKAKDELKRLPP 301 Query: 304 SSWKKSLMEVVDFCLQRL 321 + SL + +F +R Sbjct: 302 VPTRDSLASIAEFIEKRT 319 >gi|124494325|gb|ABN13218.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494345|gb|ABN13237.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii str. W23] gi|124494365|gb|ABN13256.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494405|gb|ABN13294.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] Length = 348 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 89/319 (27%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y Sbjct: 32 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 91 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+ Sbjct: 92 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 151 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +A LS + GE+ Q+ N++ YL IK KTA+L + + ++ + Sbjct: 152 TRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 211 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+ A Sbjct: 212 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYA 271 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + KN K + + + + E L+ +++ A+ + + Y QKA + L L Sbjct: 272 LE--NPALKNQLK--LINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFEKLNTL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + SL + + +R Sbjct: 328 PRGRARSSLAAIAKYIGKR 346 >gi|238026152|ref|YP_002910383.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1] gi|237875346|gb|ACR27679.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1] Length = 332 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 127/315 (40%), Positives = 177/315 (56%), Gaps = 2/315 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME++N +I + + SDV +I + +Y+I +GGKRLRP L L A L + L Sbjct: 20 IADDMEQINRVIRQSLSSDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGDGSSHRHTL 79 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 80 AAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 139 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 140 RVMEILSEATTIISEGEVLQLLNMHDADVDESRYMQVIRYKTAKLFEASARLGAVLAGAD 199 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 S A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I + GT Sbjct: 200 ASTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIHLLEHGTP 259 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ + I G + F + + AL T A Q A D+ P S +K Sbjct: 260 EQQTLAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAADAFFSSPLSIFK 317 Query: 308 KSLMEVVDFCLQRLN 322 SL+E V + R + Sbjct: 318 NSLLEYVSYSTTRKS 332 >gi|312131592|ref|YP_003998932.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132] gi|311908138|gb|ADQ18579.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132] Length = 324 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 96/320 (30%), Positives = 169/320 (52%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ +++M+ K + + V ++ ++KY+I GK++RPM TA L Sbjct: 5 IDSIQAPIVEEMKSFEKKFRKSMKTHVMLLDQIMKYIIHRKGKQIRPMFVFLTAGALGGI 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 ++ A IE +HTATL+HDDVVD++ RRG + +W N+ +VLVGD+LL++ + Sbjct: 65 KESTYRGAALIELLHTATLVHDDVVDEANYRRGFFSVNALWKNKIAVLVGDYLLAKGLLL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +E + L+ +S ++EGEL Q+ ++ LD+TEE Y VI+ KTA L +A V Sbjct: 125 SVENEDFNLLKIVSTAVREMSEGELLQIEKARKLDITEEVYYEVIRQKTATLIAACCAVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + A + + G +G+AFQ+ DD+ D+ +E+GK G D + K TLP+I Sbjct: 185 AASADRTPEEVEKARLLGEKIGMAFQIKDDLFDF--GTDEIGKPTGIDIKEKKMTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + K + I + E + + ++++ L Y +A + ++ Sbjct: 243 ALNQSSWGTKRHIINLIKNHSSKPEKVNEVIDFVKQSGGLEYATKVMQGYVDEAFELMKH 302 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P+S +K SL +V F ++R Sbjct: 303 FPESPYKTSLQGLVQFTIER 322 >gi|311068789|ref|YP_003973712.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus 1942] gi|310869306|gb|ADP32781.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus 1942] Length = 320 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 88/319 (27%), Positives = 164/319 (51%), Gaps = 4/319 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + Y Sbjct: 4 KMAYSFLNDDIDIIEKELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGNYDI 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+ Sbjct: 64 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +A LS + GE+ Q+ N++ YL IK KTA+L + + ++ + Sbjct: 124 TRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTAILIAVSCQLGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G V +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+ A Sbjct: 184 IASGADEKVHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNITLPVLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + +N K + + + + E L +++ A+ + + Y +KA L L Sbjct: 244 LEH--PGLRNQLK--LINSETTQEQLNPIIEEIKKTNAIKKSMDVSEMYLEKAFQKLNTL 299 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + SL + + +R Sbjct: 300 PRGRARSSLASIAKYIGKR 318 >gi|304316531|ref|YP_003851676.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778033|gb|ADL68592.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 319 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 106/314 (33%), Positives = 182/314 (57%), Gaps = 3/314 (0%) Query: 7 LTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVL 66 DM+K++ +L I ++ I V+ L+ SGGKR+RP+L +A A + EY D + Sbjct: 7 FVKDDMKKIDDFLLSNIKTNSPTIKKAVEDLVLSGGKRVRPLLVIAIARLGEYNEDKIIP 66 Query: 67 LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS 126 +A +IE +H ATL+HDD++DDS +RRG+ + + +G +T+V GDFL SQAF ++ + S Sbjct: 67 IAASIEIMHMATLVHDDIIDDSKMRRGRESVQSKYGKETAVFTGDFLFSQAFNVIADIIS 126 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 +E L+ ++ + EGE+ Q NLD++ YL I KTA+LF+ + E + AG+ Sbjct: 127 KENLKLIARGVKAICEGEIEQFDNRYNLDISVLRYLKRIYRKTALLFAISCESGATQAGL 186 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 + +A++ +G+N+G+AFQ+ DD+LDY G +GK +G D NG TLP+I A Sbjct: 187 SKELTRAMRRFGLNVGMAFQIADDILDYEGVEKIVGKPLGSDVLNGIYTLPMIYALSTSH 246 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSW 306 K+ + + K+S +++ + ++ + + + A Y +KA L +PD Sbjct: 247 KKA---IEDILLKDKLSKKDVNRVVKEVKLSGGIDFAKDLALKYVKKAIKFLDIMPDCEQ 303 Query: 307 KKSLMEVVDFCLQR 320 K ++++ + L+R Sbjct: 304 KDLMIDIANDALKR 317 >gi|124494465|gb|ABN13351.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494485|gb|ABN13370.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494505|gb|ABN13389.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494525|gb|ABN13408.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] Length = 348 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 89/319 (27%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y Sbjct: 32 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 91 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+ Sbjct: 92 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 151 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +A LS + GE+ Q+ N++ YL IK KTA+L + + ++ + Sbjct: 152 TRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 211 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+ A Sbjct: 212 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYA 271 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + KN K + + + + E L+ +++ A+ + + Y QKA + L L Sbjct: 272 LE--NPALKNQLK--LINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFEKLNTL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + SL + + +R Sbjct: 328 PRGRARSSLAAIAKYIGKR 346 >gi|121603663|ref|YP_980992.1| trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans CJ2] gi|120592632|gb|ABM36071.1| Trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans CJ2] Length = 327 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 134/311 (43%), Positives = 193/311 (62%), Gaps = 2/311 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M ++ +I +R+ S+V ++ V +Y+I +GGKRLRP L L L+YRG LA + Sbjct: 19 MRAMDAVIARRLQSEVPLVAQVSQYIIAAGGKRLRPALVLLMCGALDYRGAQRFNLAAVV 78 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S+AF M++E ++ Sbjct: 79 EFIHTATLLHDDVVDESTLRRGRSTANEIFGNPASVLVGDFLYSRAFQMMVEVGDMRIMQ 138 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ +AEGE+ QL + +TE YL VI+SKTA LF A+ +++L+A +V Sbjct: 139 TLAEATNVIAEGEVLQLMNMHDAGLTEAGYLRVIRSKTAKLFEASARLAALLAQSSPAVE 198 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 Q YG LG AFQ++DDVLDY GEV EMGKN+G+D R GK TLP+I+A QRGT+ E+ Sbjct: 199 QHCAEYGQALGTAFQVIDDVLDYDGEVLEMGKNLGDDLREGKVTLPLIIAMQRGTQAERA 258 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G E + + I+++ AL T A + +A ++L+ LP + + +L Sbjct: 259 TIRQAIETG--GTEQMAQVINIVQKTGALRATRDAAATEALRALNALQNLPQNPYSHALE 316 Query: 312 EVVDFCLQRLN 322 ++ L R + Sbjct: 317 QLASQLLARRS 327 >gi|89900061|ref|YP_522532.1| farnesyltranstransferase [Rhodoferax ferrireducens T118] gi|89344798|gb|ABD69001.1| Farnesyltranstransferase [Rhodoferax ferrireducens T118] Length = 327 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 126/300 (42%), Positives = 178/300 (59%), Gaps = 2/300 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 + +DM +V+ +I R+ S V ++ V +Y+I +GGKRLRP L L L ++G Sbjct: 13 SVIAQDMREVDQVIAHRLDSGVPLVGQVARYIIAAGGKRLRPALLLLICGALGFKGAQRF 72 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA +EFIHT+TLLHDDVVDDS+LRRG A +GN SVLVGDFL S+ F M+++ + Sbjct: 73 NLAAVVEFIHTSTLLHDDVVDDSSLRRGNPTANETFGNPASVLVGDFLYSRCFQMMVDAQ 132 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + ++ L+ +AEGE++QL N ++ E YL VI+SKTA LF A+ V +++AG Sbjct: 133 NMRIMQVLADATNVIAEGEVQQLMNMHNAELDEAGYLQVIRSKTAKLFEASARVGAILAG 192 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 + + YG LG AFQ++DDVLDY GE MGKN+G+D R GK TLP+I A QRG Sbjct: 193 SSPELEEICAEYGQALGTAFQVIDDVLDYTGEAAVMGKNLGDDLREGKTTLPLIAAMQRG 252 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 T + K I G +++ L + I++ AL A Q+A + R LP Sbjct: 253 TASQSALIKEAIETGGVAM--LDQVIDIVKTTGALDVAHLAATQEAQRAIAAARQLPAGP 310 >gi|258514531|ref|YP_003190753.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM 771] gi|257778236|gb|ACV62130.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM 771] Length = 323 Score = 271 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 103/320 (32%), Positives = 173/320 (54%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K+ + D++ V + + + + ++ + +L+ +GGKRLRP L Y Sbjct: 5 LKLFNE-IKDDLKIVEQELYQVVQTPDALLTETSVHLLNAGGKRLRPAFCLLGGKFYNYD 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + LA A+E IH A+L+HDDVVD S RRG + WGN+ SV VGD+L +++ + Sbjct: 64 IKKLLPLAVALELIHMASLVHDDVVDASMTRRGMPTVKAKWGNRISVHVGDYLFAKSLIL 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + K LS + ++EGE++Q+S S N++ +DY + IK KTA+L SA+ ++ Sbjct: 124 ISSYKEPLITRVLSDTSVKMSEGEIQQISTSFNVNQYLKDYFYRIKRKTALLISASCQLG 183 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G + L YG +G+AFQ+ DD+LD N++GK IG D R G TLPVI Sbjct: 184 AVACGAPKEIYLPLNRYGHYIGMAFQITDDILDMVANKNKLGKPIGGDLRQGIITLPVIY 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A ++ ++E+ + I S + + +A I++++ + + A Y KA+ L Sbjct: 244 ALEKSPRKER--LRDLIVKEVKSDKEVYEAIEIIKKSGGIKYSFDIADKYIHKARIHLAK 301 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD++ K +L +F R Sbjct: 302 LPDNTIKSTLNLAAEFIKVR 321 >gi|296332988|ref|ZP_06875445.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674908|ref|YP_003866580.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii str. W23] gi|296149839|gb|EFG90731.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413152|gb|ADM38271.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii str. W23] Length = 320 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 89/319 (27%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y Sbjct: 4 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+ Sbjct: 64 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +A LS + GE+ Q+ N++ YL IK KTA+L + + ++ + Sbjct: 124 TRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+ A Sbjct: 184 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + KN K + + + + E L+ +++ A+ + + Y QKA + L L Sbjct: 244 LE--NPALKNQLK--LINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFEKLNTL 299 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + SL + + +R Sbjct: 300 PRGRARSSLAAIAKYIGKR 318 >gi|163753001|ref|ZP_02160125.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1] gi|161326733|gb|EDP98058.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1] Length = 325 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 101/320 (31%), Positives = 172/320 (53%), Gaps = 4/320 (1%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYR 60 ++ + +ME + S V ++ + Y++ GK++RPM + M+ Sbjct: 6 QIKQPIITEMELFEKKFSNSMTSKVALLNRITHYIVNRKGKQMRPMFVFLVSKMVSDGLV 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + Sbjct: 66 NDRTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLL 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 I+ + L+ +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A + Sbjct: 126 SIDNGDFDLLKIISVAVREMSEGELLQIEKARKLDITEDVYYEIIRQKTATLIAACCAMG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + + L+ +G +G+AFQ+ DD+ DY G+ ++GK G D + K TLP+I Sbjct: 186 AKSVNASDEEVENLRLFGEYIGMAFQIKDDLFDY-GDT-QIGKPTGIDIKEQKMTLPLIY 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A TK+EK + ++I + + +K+ +++ L + SY +KA L Sbjct: 244 ALNHCTKQEKKWVINSIKNHNKDKKRVKEVIAFVKKTGGLEYAITQMKSYQEKALKLLEI 303 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S++K SL +V++ + R Sbjct: 304 YPQSTYKDSLELMVNYVIDR 323 >gi|332967870|gb|EGK06966.1| octaprenyl-diphosphate synthase [Kingella kingae ATCC 23330] Length = 324 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 124/320 (38%), Positives = 192/320 (60%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + D+ +VN ++ + + SDV +I + Y+I +GGKRLRP+LT+ + L Y Sbjct: 5 IPYFQQNLEHDLSRVNVVVNQAVQSDVALISQIGTYIIGAGGKRLRPILTILSGKCLGYD 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D LA +EFIHT+TLLHDDVVD+S LRRG+ A ++GN +VLVGDFL ++AF + Sbjct: 65 DDKLYSLAAMVEFIHTSTLLHDDVVDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + S + LE ++ +AEGE+ QL N+D+TE YL VI+ KTA LF AA +V Sbjct: 125 MVGSGSLKILEVMADATNIIAEGEVMQLMNIGNVDITEAQYLQVIQYKTAKLFEAAAQVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++AG QALK +GM++G AFQ++DDVLDY G V ++GKN+G+D GKPTLP+I Sbjct: 185 AILAGATAEQEQALKDFGMHMGTAFQIIDDVLDYSGSVEQIGKNVGDDLAEGKPTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 QRG + + ++ + + + K + ++ AL +A A D L Sbjct: 245 LMQRGNVQAASDVRAALQNA--DRDYFDKIHAHVTQSDALAYCIEQAKVAVDNAIDCLNA 302 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + ++ ++ + + R Sbjct: 303 LPQNEVTAAMRQMAELSVAR 322 >gi|261417952|ref|YP_003251634.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC61] gi|319767236|ref|YP_004132737.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC52] gi|261374409|gb|ACX77152.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC61] gi|317112102|gb|ADU94594.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC52] Length = 320 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 89/320 (27%), Positives = 162/320 (50%), Gaps = 4/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + D+ V + + + S+ + + +L+ +GGKR+RP+ L +A Y Sbjct: 3 LKAMYSFLSDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ +RRG+ + W N+ ++ GD+L +++ Sbjct: 63 FERIKHVAVALELIHMASLVHDDVIDDADVRRGRPTIKARWSNRFAMYTGDYLFARSLER 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S A + L+ + GE+ Q+ D YL I+ KTA+L +A+ ++ Sbjct: 123 MAELDSPRAHQVLAKTIVEVCHGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L AG +V L +G +G++FQ+ DD+LD+ G ++GK G D + G TLPV+ Sbjct: 183 ALAAGAPEAVANRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLQQGNVTLPVLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A E+ K T + VE + +++ A+ + + Y +KA L Sbjct: 243 ALC----DEQVRAKITAVNADTDVEEMAAVLAAIKQTDAIERSYALSDRYLEKALRLLGE 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + + L ++ + +R Sbjct: 299 LPANEARTLLHDLALYIGKR 318 >gi|295677741|ref|YP_003606265.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002] gi|295437584|gb|ADG16754.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002] Length = 330 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 128/313 (40%), Positives = 179/313 (57%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +DM++VN +I +R+ SDV +I + +Y+I +GGKRLRP L L A L + L Sbjct: 18 IAEDMQQVNRVIRQRLASDVMLINQISEYIISAGGKRLRPALLLLVAGALGDTTGHRHEL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGDFL S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA ++ +++AG Sbjct: 138 RVMEILSEATNIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGAD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 AKTEAAAAEYGRRIGTAFQIMDDWLDYTGTAESMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ P S +K Sbjct: 258 EQSALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECAKQEAQAAAAAVSSFPHSIFK 315 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + R Sbjct: 316 ESLLELCSYSTAR 328 >gi|76809882|ref|YP_334895.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b] gi|167721317|ref|ZP_02404553.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei DM98] gi|167740286|ref|ZP_02413060.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 14] gi|167817505|ref|ZP_02449185.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 91] gi|167825907|ref|ZP_02457378.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 9] gi|167847393|ref|ZP_02472901.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei B7210] gi|167895981|ref|ZP_02483383.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 7894] gi|167904366|ref|ZP_02491571.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei NCTC 13177] gi|167912626|ref|ZP_02499717.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 112] gi|167920573|ref|ZP_02507664.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei BCC215] gi|254258017|ref|ZP_04949071.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a] gi|254299344|ref|ZP_04966794.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e] gi|76579335|gb|ABA48810.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b] gi|157809083|gb|EDO86253.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e] gi|254216706|gb|EET06090.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a] Length = 330 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 127/313 (40%), Positives = 178/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L + +L Sbjct: 18 IASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQKHVL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 138 RVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGAD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ P S++K Sbjct: 258 EQSTLAREAIEHG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSNFK 315 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + R Sbjct: 316 ESLLELCSYSTSR 328 >gi|297529620|ref|YP_003670895.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. C56-T3] gi|297252872|gb|ADI26318.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. C56-T3] Length = 320 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 88/320 (27%), Positives = 161/320 (50%), Gaps = 4/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + D+ V + + + S+ + + +L+ +GGKR+RP+ L +A Y Sbjct: 3 LKAMYSFLSDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ +RRG+ + W N+ ++ GD+L +++ Sbjct: 63 FERIKHVAVALELIHMASLVHDDVIDDADVRRGRPTIKARWSNRFAMYTGDYLFARSLER 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S A + L+ + GE+ Q+ D YL I+ KTA+L +A+ ++ Sbjct: 123 MAELDSPRAHQVLAKTIVEVCHGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L AG +V L +G +G++FQ+ DD+LD+ G ++GK G D + G TLPV+ Sbjct: 183 ALAAGAPEAVANQLYWFGHCVGMSFQITDDILDFTGTEEQLGKPAGSDLQQGNVTLPVLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A E+ K T + E + +++ A+ + + Y +KA L Sbjct: 243 ALC----DEQVRAKITAVNADTDAEEMAAVLAAIKQTDAIERSYALSDRYLEKALRLLGE 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + + L ++ + +R Sbjct: 299 LPANEARTLLHDLALYIGKR 318 >gi|325958579|ref|YP_004290045.1| dimethylallyltranstransferase [Methanobacterium sp. AL-21] gi|325330011|gb|ADZ09073.1| Dimethylallyltranstransferase [Methanobacterium sp. AL-21] Length = 328 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 93/326 (28%), Positives = 167/326 (51%), Gaps = 11/326 (3%) Query: 6 DLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNH 64 D+ K ++ I + + D E + ++LI +GGK++RP + + +A+ + + Sbjct: 5 DILKKYSSDIDEEIQNSLSTVDPEELKKSTQHLIKAGGKKIRPSMVVLSAIAVGGAPEEA 64 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 + A A+E IHT +L+HDD++D+ +RRG+ + ++WG ++L GD L S+AF V+ET Sbjct: 65 LKTAAAVELIHTFSLIHDDIMDEDDMRRGEPSVHVLWGEPMAILAGDTLFSKAFETVLET 124 Query: 125 KSQEALEALSLVAC--------TLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 + A + EG+ + N +V+EE Y+++I KT L +A+ Sbjct: 125 PIDNVSYERVVGALKTVVDSCIKICEGQASDMCFEGNFEVSEEAYMNMIYKKTGALIAAS 184 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + ++I G + L YG +G+AFQ+ DD LD + ++GK +G D GK TL Sbjct: 185 TKSGAIIGGGTPEQVELLSEYGRLVGLAFQIQDDYLDVMSDEQDLGKPVGSDVVEGKMTL 244 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 V+ A + + +K S + + N+ +A + + ++ + A AK Sbjct: 245 MVVNALSKASPEDKKELISILEAEDDT--NVTRALELFNKYDSIDYAKNIALDNINTAKS 302 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQRLN 322 L LPDS K+SL + DF ++R++ Sbjct: 303 LLDELPDSEAKESLSMIADFVVERIH 328 >gi|15837992|ref|NP_298680.1| octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c] gi|9106399|gb|AAF84200.1|AE003970_7 octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c] Length = 332 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 121/321 (37%), Positives = 180/321 (56%), Gaps = 2/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ DM ++ LI R+ SD+ +I + ++I SGGKRLRPMLT+ + Sbjct: 13 LPQIQSFAASDMAAIDTLIHDRLTSDIVLINQIADHIICSGGKRLRPMLTMLAGHAIGPT 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA IEFIHTATLLHDDVVD S LRR + A +WGN SVLVGDFL S++F + Sbjct: 73 GPHHHQLAAIIEFIHTATLLHDDVVDGSELRRSRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + E ++ L+ ++EGE+ QL N D E YL VI+ KTA+LF+AA ++ Sbjct: 133 MTELANLEVMQILAETTNRISEGEVLQLLHVHNPDTDETTYLRVIERKTAILFAAAAQLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L + + + YGM LG AFQ+ DDVLDY +++GKN+G+D GK TLPVI Sbjct: 193 ALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGKNLGDDLAEGKATLPVIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + I+ G + + + +R +L + RA +Y A+ +L Sbjct: 253 AMTHSDAATCERLRMIISKG--DRDAMPEVLNAIRTTGSLDYSRQRASAYAATAERALDG 310 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 L ++ +L + + +QR Sbjct: 311 LLETEAVAALRGLARYAIQRT 331 >gi|53726074|ref|YP_104070.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344] gi|121600728|ref|YP_991797.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1] gi|124384831|ref|YP_001027290.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229] gi|126441901|ref|YP_001060502.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668] gi|126448324|ref|YP_001082773.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247] gi|52429497|gb|AAU50090.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344] gi|121229538|gb|ABM52056.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1] gi|124292851|gb|ABN02120.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229] gi|126221394|gb|ABN84900.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668] gi|126241194|gb|ABO04287.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247] Length = 330 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 127/313 (40%), Positives = 178/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 18 IASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTSQKHVL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 138 RVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGAD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ P S++K Sbjct: 258 EQSTLAREAIEHG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSNFK 315 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + + R Sbjct: 316 ESLLELCSYSMSR 328 >gi|218258587|ref|ZP_03474930.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii DSM 18315] gi|218225357|gb|EEC98007.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii DSM 18315] Length = 324 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 102/318 (32%), Positives = 170/318 (53%), Gaps = 1/318 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 +E + ++ N + S+ + + ++ + GK +RP+L L A D Sbjct: 6 KIEQPVAVEFKRFNDEFAASLRSETNRLQSAIDQILNASGKHIRPLLVLLAAKACGQVTD 65 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 N + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A I Sbjct: 66 NTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRSI 125 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +T + + + +S + L+EGE++QL ++ + E Y+ VI+ KTA+L SA E+ S+ Sbjct: 126 QTGNLQIIGIVSNLGRDLSEGEIKQLETAEESIIDESCYMQVIRKKTAMLLSACSEIGSI 185 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AG + + + +G LG FQ+ DD+ DY + +GK G D R GK TLP++ A Sbjct: 186 SAGASGEMVEKCREFGEYLGYCFQIKDDIFDYF-KEANIGKPTGNDIREGKVTLPLLHAL 244 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 Q G K E + IN+ +VEN+ + N + E R Y KA L+ LP Sbjct: 245 QTGRKEEVDHCLRIINEKDFTVENIDLLIDFAKANGGIEYAEQRMLEYHDKAVGVLKTLP 304 Query: 303 DSSWKKSLMEVVDFCLQR 320 +S ++ L+ + D+ ++R Sbjct: 305 ESEAREGLLLLADYIIER 322 >gi|194364794|ref|YP_002027404.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3] gi|194347598|gb|ACF50721.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3] Length = 332 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 129/322 (40%), Positives = 188/322 (58%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + + Sbjct: 13 LPQIQSLAAADMAAVDALIRRRLSSDVVLINQIADHIISAGGKRLRPMLVMLAGRAVGNV 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S+LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESSLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELERMSVMQILADATNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +GV + +QAL YGM+LG AFQ+ DDVLDY E+GKN+G+D GK TLP+I Sbjct: 193 ALASGVDEATQQALFDYGMHLGYAFQIADDVLDYSANAEELGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + ++ + DG S + + +R L + RA Y + A+ +L Sbjct: 253 AMAHSNDATRERLRTIVQDGDAS--AMPEVLAAIRATGGLEYSRARAEEYAEAAERALDG 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L D+ +L + + +QR + Sbjct: 311 LGDNDAVAALRGLARYAVQRSH 332 >gi|319651348|ref|ZP_08005477.1| HepT protein [Bacillus sp. 2_A_57_CT2] gi|317396879|gb|EFV77588.1| HepT protein [Bacillus sp. 2_A_57_CT2] Length = 320 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 93/320 (29%), Positives = 170/320 (53%), Gaps = 4/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +KM+ D+ + + + I ++ ++ +L+ +GGKR+RP+ L A EY Sbjct: 3 LKMMYSFLNSDLTVIENELEETIKAESPLLHQASLHLLQAGGKRIRPVFVLLAAKFGEYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D +A ++E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD++ ++A + Sbjct: 63 IDKIKNVAVSLELIHMASLVHDDVIDDAELRRGQPTIKAKWDNKIAMYTGDYIFARALEL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + K+ A + LS L GE+ Q+ N D Y IK KTA+L + + ++ Sbjct: 123 ITNIKNPHAHKILSHTLVELCIGEIEQIKDKYNYDQNIRTYFRRIKRKTAMLIAVSCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + A V+ + + L +G +G+++Q++DDVLD+ G E+GK G D G TLP + Sbjct: 183 GIAANVEEDIHKKLFKFGYFVGMSYQIIDDVLDFVGTEKELGKPAGGDLHQGNITLPALF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + ++ S +++G +++K +++++ A+ + + Y QKA L Sbjct: 243 AMEDSIICDQ---ISRVHEG-TERSDIEKIIALVKDSGAVEKSLQISDKYLQKALGVLEE 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP S KK+L ++ F +R Sbjct: 299 LPPSRSKKALRDIAKFIGKR 318 >gi|56420745|ref|YP_148063.1| heptaprenyl diphosphate synthase component II [Geobacillus kaustophilus HTA426] gi|56380587|dbj|BAD76495.1| heptaprenyl diphosphate synthasecomponent II (spore germination protein C3) [Geobacillus kaustophilus HTA426] Length = 320 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 88/320 (27%), Positives = 161/320 (50%), Gaps = 4/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + D+ V + + + S+ + + +L+ +GGKR+RP+ L +A Y Sbjct: 3 LKAMYSFLNDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ +RRG+ + W N+ ++ GD+L +++ Sbjct: 63 FERIKHVAVALELIHMASLVHDDVIDDADVRRGRPTIKARWSNRFAMYTGDYLFARSLER 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E S A + L+ + GE+ Q+ D YL I+ KTA+L +A+ ++ Sbjct: 123 MAELDSPRAHQVLAKTIVEVCHGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L AG +V L +G +G++FQ+ DD+LD+ G ++GK G D + G TLPV+ Sbjct: 183 ALAAGAPEAVANQLYWFGHCVGMSFQITDDILDFTGTEEQLGKPAGSDLQQGNVTLPVLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A E+ K T + E + +++ A+ + + Y +KA L Sbjct: 243 ALC----DEQVRAKITAVNADTDAEEMAAVLAAIKQTDAIERSYALSDRYLEKALRLLGE 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + + L ++ + +R Sbjct: 299 LPANEARTLLHDLALYIGKR 318 >gi|257092398|ref|YP_003166039.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044922|gb|ACV34110.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 320 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 135/320 (42%), Positives = 187/320 (58%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M+ +L DM V+ +I +R+ SD+ ++ V +Y+I GGKRLRP L L A L+YR Sbjct: 1 MEQFYNLIELDMTAVDAVIRRRLHSDIALVRQVAEYIIQGGGKRLRPALVLLAAGALDYR 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA IEFIHTATLLHDDVVD S LRRG+ A ++GN SVLVGDFL S+AF M Sbjct: 61 GTHHHELAAVIEFIHTATLLHDDVVDGSDLRRGRDTANAIFGNSASVLVGDFLYSRAFQM 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + LS +AEGE+ QL + DV E YL VI+ KTA LF AA ++ Sbjct: 121 MVAVDDMRVMRVLSDATNVIAEGEVLQLMNCHDADVDEAGYLQVIRYKTAKLFEAAAQLG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++I G + Q + +YG++LG AFQL+DDVLDY G E GK++G+D GKPTLP+I Sbjct: 181 AIIGGGSAAAEQGMATYGIHLGTAFQLIDDVLDYSGAEVETGKHLGDDLAEGKPTLPLIF 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q G + + I G ++ +R AL +A + + A +L Sbjct: 241 VLQHGNTEQAACVRRAIESG--GRDDFPNVLAAIRATGALDYARRKARAEAELAAAALSV 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 +P S +K SL+E+ F + R Sbjct: 299 VPASQYKDSLLELSLFAVAR 318 >gi|16079331|ref|NP_390155.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|399776|sp|P31114|HEPS2_BACSU RecName: Full=Heptaprenyl diphosphate synthase component 2; Short=HEPPP synthase subunit 2; AltName: Full=Spore germination protein C3 gi|143803|gb|AAA20856.1| GerC3 [Bacillus subtilis] gi|2634692|emb|CAB14190.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|124494285|gb|ABN13180.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|124494305|gb|ABN13199.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494385|gb|ABN13275.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494445|gb|ABN13332.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. SMY] Length = 348 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 89/319 (27%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y Sbjct: 32 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 91 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+ Sbjct: 92 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 151 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +A LS + GE+ Q+ N++ YL IK KTA+L + + ++ + Sbjct: 152 TRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 211 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+ A Sbjct: 212 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYA 271 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + KN K + + + + E L+ +++ A+ + + Y QKA L L Sbjct: 272 LK--NPALKNQLK--LINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFQKLNTL 327 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + SL + + +R Sbjct: 328 PRGRARSSLAAIAKYIGKR 346 >gi|52080783|ref|YP_079574.1| heptaprenyl diphosphate synthase component II [Bacillus licheniformis ATCC 14580] gi|52786153|ref|YP_091982.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus licheniformis ATCC 14580] gi|319645260|ref|ZP_07999493.1| HepT protein [Bacillus sp. BT1B_CT2] gi|52003994|gb|AAU23936.1| heptaprenyl diphosphate synthase component II [Bacillus licheniformis ATCC 14580] gi|52348655|gb|AAU41289.1| HepT [Bacillus licheniformis ATCC 14580] gi|317393069|gb|EFV73863.1| HepT protein [Bacillus sp. BT1B_CT2] Length = 320 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 83/320 (25%), Positives = 167/320 (52%), Gaps = 4/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + D+E + + K + SD ++ + +L+ +GGKR+RP+ L + + EY Sbjct: 3 LTTFYSFLNDDIELIEKELEKTVHSDYPLLSEASLHLLQAGGKRIRPVFVLLSGMFGEYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 +A ++E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD+L +++ Sbjct: 63 ISKIKNVAVSLELIHMASLVHDDVIDDAELRRGQPTIKAKWDNRIAMYTGDYLFARSLEA 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + +A E LS + GE+ Q+ N++ YL I+ KTA+L +++ ++ Sbjct: 123 MTKINEPKAHEILSKAIVEVCLGEIEQIKDKYNMEQNLRTYLRRIRRKTALLIASSCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AG ++ + L +G +G+++Q++DD+LD+ E+GK +G D G TLPV+ Sbjct: 183 AIAAGAGENIHKTLYWFGYYVGMSYQIIDDILDFTSSEKELGKPVGSDLLQGNVTLPVLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + + + + E +K +++ A+ + + Y KA + L Sbjct: 243 ARKSPELKARLMLV----NSETTPEQIKPVIEELKKTDAIEQSFRVSEMYLNKAFELLET 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + + +L ++ + +R Sbjct: 299 LPKNRARTALGQIAKYIGKR 318 >gi|238561270|ref|ZP_00442352.2| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4] gi|251766623|ref|ZP_04819732.1| polyprenyl synthetase [Burkholderia mallei PRL-20] gi|254178909|ref|ZP_04885563.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399] gi|254202791|ref|ZP_04909154.1| polyprenyl synthetase [Burkholderia mallei FMH] gi|254208133|ref|ZP_04914483.1| polyprenyl synthetase [Burkholderia mallei JHU] gi|254357663|ref|ZP_04973937.1| polyprenyl synthetase [Burkholderia mallei 2002721280] gi|147747038|gb|EDK54115.1| polyprenyl synthetase [Burkholderia mallei FMH] gi|147752027|gb|EDK59094.1| polyprenyl synthetase [Burkholderia mallei JHU] gi|148026727|gb|EDK84812.1| polyprenyl synthetase [Burkholderia mallei 2002721280] gi|160694823|gb|EDP84831.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399] gi|238524982|gb|EEP88412.1| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4] gi|243065293|gb|EES47479.1| polyprenyl synthetase [Burkholderia mallei PRL-20] Length = 332 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 127/313 (40%), Positives = 178/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 20 IASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTSQKHVL 79 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 80 AAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 139 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 140 RVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGAD 199 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 200 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTP 259 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ P S++K Sbjct: 260 EQSTLAREAIEHG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSNFK 317 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + + R Sbjct: 318 ESLLELCSYSMSR 330 >gi|53720615|ref|YP_109601.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243] gi|126451455|ref|YP_001067764.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1106a] gi|237813898|ref|YP_002898349.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346] gi|242316724|ref|ZP_04815740.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b] gi|254180568|ref|ZP_04887166.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655] gi|254190992|ref|ZP_04897498.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur 52237] gi|254199098|ref|ZP_04905513.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13] gi|52211029|emb|CAH37017.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243] gi|126225097|gb|ABN88637.1| polyprenyl synthetase [Burkholderia pseudomallei 1106a] gi|157938666|gb|EDO94336.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur 52237] gi|169656928|gb|EDS88325.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13] gi|184211107|gb|EDU08150.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655] gi|237505493|gb|ACQ97811.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346] gi|242139963|gb|EES26365.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b] Length = 332 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 127/313 (40%), Positives = 178/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L + +L Sbjct: 20 IASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQKHVL 79 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 80 AAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 139 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 140 RVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGAD 199 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 200 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTP 259 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ P S++K Sbjct: 260 EQSTLAREAIEHG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSNFK 317 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + R Sbjct: 318 ESLLELCSYSTSR 330 >gi|319953718|ref|YP_004164985.1| trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237] gi|319422378|gb|ADV49487.1| Trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237] Length = 325 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 95/322 (29%), Positives = 171/322 (53%), Gaps = 4/322 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--E 58 + +++ +++ME + + S V ++ + Y++ GK++RPM T+ ++ Sbjct: 4 VDQIKEPIIEEMELFEKKFYESMTSKVALLNRITHYIVNRKGKQMRPMFVFLTSKLINNG 63 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + A IE IHTATL+HDDVVD+S RRG + +W N+ +VLVGD+LLS+ Sbjct: 64 EVNERTYRGASVIELIHTATLVHDDVVDESNKRRGFFSINALWKNKIAVLVGDYLLSKGL 123 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 + I+ + L+ +S+ ++EGEL Q+ ++ LD+TE Y +I+ KTA L +A Sbjct: 124 LLSIDNGDFDLLKIISVAVREMSEGELLQIEKARRLDITEAIYYEIIRQKTATLIAACCS 183 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + + + + + +G G+AFQ+ DD+ DY G+ +GK G D + K TLP+ Sbjct: 184 LGACSVKPDSEEVEVFRKFGEYCGMAFQIKDDLFDY-GDAA-IGKPTGIDIKEQKMTLPL 241 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 I +K+EK + ++I + + +K+ +++N L + + +A L Sbjct: 242 IYVLNNCSKKEKKWVINSIKNHNKDKKRVKEVINFVKDNGGLEYAVTKMLEFKDQALTIL 301 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 PDS +K SL +V++ + R Sbjct: 302 ETYPDSDYKNSLQLMVNYVVDR 323 >gi|221310190|ref|ZP_03592037.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|221314513|ref|ZP_03596318.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319435|ref|ZP_03600729.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. JH642] gi|221323711|ref|ZP_03605005.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. SMY] gi|321311744|ref|YP_004204031.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis BSn5] gi|291484698|dbj|BAI85773.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. natto BEST195] gi|320018018|gb|ADV93004.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis BSn5] Length = 320 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 89/319 (27%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y Sbjct: 4 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+ Sbjct: 64 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +A LS + GE+ Q+ N++ YL IK KTA+L + + ++ + Sbjct: 124 TRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+ A Sbjct: 184 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + KN K + + + + E L+ +++ A+ + + Y QKA L L Sbjct: 244 LK--NPALKNQLK--LINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFQKLNTL 299 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + SL + + +R Sbjct: 300 PRGRARSSLAAIAKYIGKR 318 >gi|167564177|ref|ZP_02357093.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis EO147] gi|167571298|ref|ZP_02364172.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis C6786] Length = 330 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 126/313 (40%), Positives = 176/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 18 IASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTSQKHVL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 138 RVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGAD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAASMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ P S +K Sbjct: 258 EQSALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSIFK 315 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + R Sbjct: 316 ESLLELCSYSTSR 328 >gi|294085837|ref|YP_003552597.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665412|gb|ADE40513.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum marinum IMCC1322] Length = 357 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 135/316 (42%), Positives = 202/316 (63%), Gaps = 5/316 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +L DM +VN I+ R+ SDV +IP + +LI SGGKR+RP++TLA A + Sbjct: 29 LTALVNLLADDMAQVNETIMARMTSDVPLIPQLAGHLITSGGKRMRPLMTLAGARIASPN 88 Query: 61 GDNHVL----LACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116 + + LA A+EFIH+ATLLHDDV+D+S +RRG+ A +WGN SVLVGDFL ++ Sbjct: 89 TTSCSVAAIKLATAVEFIHSATLLHDDVIDESNMRRGQDTANALWGNDASVLVGDFLFAR 148 Query: 117 AFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAA 176 AF +++E+ + + L LS + + E E++Q++++ N D EDYL VI+ KTA+LF+AA Sbjct: 149 AFELMVESGNIDVLGTLSSASARITEAEIKQMTVAGNPDTRLEDYLDVIEGKTAILFAAA 208 Query: 177 LEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTL 236 + I+G + QA+ YG+NLG+AFQ++DD LDY + +MGKN G+DF + K T+ Sbjct: 209 AASGARISGADEQITQAMHMYGLNLGLAFQIMDDALDYTADSAQMGKNAGDDFLDQKITM 268 Query: 237 PVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 PVILA+Q+ E+ FW TI DG + E+ KA I+ ++A+ + A SY KAK Sbjct: 269 PVILAYQKANDEERGFWHRTIGDGNFAAEDFAKAQSILSHHKAIEASLEAATSYANKAKA 328 Query: 297 SLRCLPDSSWKKSLME 312 +L D+ + L + Sbjct: 329 ALAIF-DAPDQAELAQ 343 >gi|83721521|ref|YP_441686.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264] gi|167618604|ref|ZP_02387235.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis Bt4] gi|257137855|ref|ZP_05586117.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264] gi|83655346|gb|ABC39409.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264] Length = 330 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 127/313 (40%), Positives = 176/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 18 IASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGEHTSQKHVL 77 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 78 AAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 137 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 138 RVMEILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGAD 197 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 198 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTP 257 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ P S +K Sbjct: 258 EQSTLAREAIEHG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPPSIFK 315 Query: 308 KSLMEVVDFCLQR 320 +SL+E+ + R Sbjct: 316 ESLLELCFYSTSR 328 >gi|153837920|ref|ZP_01990587.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810] gi|149748698|gb|EDM59549.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810] Length = 277 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 114/277 (41%), Positives = 167/277 (60%), Gaps = 1/277 (0%) Query: 45 LRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQ 104 LRP+L + +A L Y+G H + A IEFIHTATLLHDDVVD+S +RRGK A +GN Sbjct: 1 LRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAAFGNA 60 Query: 105 TSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHV 164 SVLVGDF+ +++F M+ E S + L+ +S +AEGE++QL + D TEE Y+ V Sbjct: 61 ASVLVGDFIYTRSFQMMTELGSMKILQLMSNAVNVIAEGEVQQLMNCNDPDTTEESYMQV 120 Query: 165 IKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKN 224 I SKTA LF +A ++ +++ V AL++YG LG AFQL+DDV+DY + +MGKN Sbjct: 121 IYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSDGEDMGKN 180 Query: 225 IGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTE 284 +G+D GKPTLP++ A + T + I +E L + +M+E +L T Sbjct: 181 VGDDLAEGKPTLPLLHAMRNTTPENALMIREAIEKAN-GMERLDEILAVMKEAGSLEYTT 239 Query: 285 YRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +A KA L LP+S +K++L+ + ++R Sbjct: 240 QKALEEADKAIAELEVLPESEYKEALITLAHVAVKRT 276 >gi|328552808|gb|AEB23300.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens TA208] Length = 320 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 87/319 (27%), Positives = 165/319 (51%), Gaps = 4/319 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y Sbjct: 4 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+ Sbjct: 64 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLADSLEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +A LS + GE+ Q+ N++ YL IK KTA+L + + ++ + Sbjct: 124 TRLDEPKAHRILSKTIVEVCLGEIEQIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+ A Sbjct: 184 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + +N K + + + + E L ++ A+ + + Y +KA + L L Sbjct: 244 LHQ--PELRNQLK--LINSETTQEQLAPIIENIKRTDAIEKSMAVSDRYLKKAFEKLNTL 299 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + SL + + +R Sbjct: 300 PRGRARSSLAAIAKYIGKR 318 >gi|190573198|ref|YP_001971043.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas maltophilia K279a] gi|190011120|emb|CAQ44729.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas maltophilia K279a] Length = 332 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 129/322 (40%), Positives = 188/322 (58%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + + Sbjct: 13 LPQIQSLAAADMAAVDALIRRRLSSDVVLINQIADHIISAGGKRLRPMLVMLAGHAVGQA 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G H LA IEFIHT+TLLHDDVVD+S+LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPEHHQLAAIIEFIHTSTLLHDDVVDESSLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELERMPVMQILADATNRIAEGEVLQLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +GV + +QAL YGM+LG AFQ+ DDVLDY E+GKN+G+D GK TLP+I Sbjct: 193 ALASGVDEATQQALFDYGMHLGYAFQIADDVLDYSANAEELGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + ++ + DG S + + +R L + RA Y + A+ +L Sbjct: 253 AMAHSDDATRERLRTIVQDGDAS--AMPEVLAAIRSTGGLEYSRARAEEYAEAAERALDG 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L D+ +L + + +QR + Sbjct: 311 LGDNDAVAALRGLARYAVQRSH 332 >gi|308174066|ref|YP_003920771.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens DSM 7] gi|307606930|emb|CBI43301.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens DSM 7] gi|328912396|gb|AEB63992.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens LL3] Length = 320 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 87/319 (27%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 KM D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y Sbjct: 4 KMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDI 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + +A +E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ + M+ Sbjct: 64 NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +A LS + GE+ Q+ N++ YL IK KTA+L + + ++ + Sbjct: 124 TRLDEPKAHRILSKTIVEVCLGEIEQIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G + +AL +G +G+++Q++DD+LD+ E+GK +G D G TLPV+ A Sbjct: 184 IASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++ +N K + + + + E L ++ A+ + + Y +KA + L L Sbjct: 244 LRQ--PELRNQLK--LINSETTQEQLAPIIKNIKRTDAIEKSMAVSDRYLKKAFEKLNTL 299 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P + SL + + +R Sbjct: 300 PRGRARSSLAAIAKYIGKR 318 >gi|310642561|ref|YP_003947319.1| heptaprenyl diphosphate synthase component ii (spore germination protein c3) [Paenibacillus polymyxa SC2] gi|309247511|gb|ADO57078.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Paenibacillus polymyxa SC2] Length = 324 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 102/322 (31%), Positives = 172/322 (53%), Gaps = 2/322 (0%) Query: 1 MKMLE--DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 MK L+ L KDM + + + I S +I D +L+ +GGKRLRP+ L E Sbjct: 1 MKRLDLFGLLKKDMNFIEEELYRSIDSREPLINDTSLHLLKAGGKRLRPVFVLLGGKFGE 60 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 Y D +A +E IH+A+L+HDDV+DD+ +RRG+ + W N+ ++ GD++ ++A Sbjct: 61 YDLDKLKRIAVPLELIHSASLVHDDVIDDAEMRRGQPTVKSKWDNRVAMYTGDYIYARAL 120 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 + + + LS ++ GE+ Q+ N+D + +YL I+ KTA+L + + + Sbjct: 121 SIAAGLPNPDIHRVLSKALVQMSIGEMEQIRDFFNVDQSVRNYLLRIRRKTALLIAVSCQ 180 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + ++ AG + V L +YG N+G+AFQ+ DD+LD G ++GK G D R G TLPV Sbjct: 181 LGAMAAGARERVNSLLYTYGYNVGMAFQIQDDLLDLCGTEKKIGKPPGSDMRQGNITLPV 240 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 I A ++ R+ + + +KA +++++ + E A Y KA ++L Sbjct: 241 IYALEQPELRDDLLAEIWRIQDGDGQGDTRKAVDMIKKSEGITKAEILADRYINKALNAL 300 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 LPD KK+L ++ F +R Sbjct: 301 DLLPDVKTKKTLRDIAHFVTRR 322 >gi|308069508|ref|YP_003871113.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase subunit 2) [Paenibacillus polymyxa E681] gi|305858787|gb|ADM70575.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase subunit 2) [Paenibacillus polymyxa E681] Length = 324 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 107/323 (33%), Positives = 175/323 (54%), Gaps = 4/323 (1%) Query: 1 MKMLE--DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 MK L+ L KDM + + + I S +I D +L+ +GGKRLRP+ L E Sbjct: 1 MKRLDLFGLLKKDMNFIEEELYRSIDSTEPLINDTSLHLLKAGGKRLRPVFVLLGGKFGE 60 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 Y D +A +E IH+A+L+HDDV+DD+ +RRG+ + W N+ ++ GD++ ++A Sbjct: 61 YDLDKLKRIAVPLELIHSASLVHDDVIDDAEMRRGQPTVKSKWDNRVAMYTGDYIYARAL 120 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 + + + LS ++ GE+ Q+ N+D + +YL I+ KTA+L + + + Sbjct: 121 SIAAGLPNPDIHRVLSKALVQMSIGEMEQIRDFFNVDQSVRNYLLRIRRKTALLIAVSCQ 180 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + ++ AG + SV L SYG N+G+AFQ+ DD+LD G ++GK G D R G TLPV Sbjct: 181 LGAMAAGARESVNSLLYSYGYNVGMAFQIQDDLLDLCGTEKKIGKPPGSDMRQGNITLPV 240 Query: 239 ILAFQRGTKREKNFWK-STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I A ++ R + I DG + +KA +++++ + E A Y KA ++ Sbjct: 241 IYALEQPELRADLLAEIRRIQDGD-GQGDARKAVDMIKKSEGIAKAEILADRYINKALNA 299 Query: 298 LRCLPDSSWKKSLMEVVDFCLQR 320 L LPD KK+L ++ F +R Sbjct: 300 LDLLPDVKTKKTLRDIAHFVTRR 322 >gi|154494276|ref|ZP_02033596.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC 43184] gi|154085960|gb|EDN85005.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC 43184] Length = 324 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 169/318 (53%), Gaps = 1/318 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 +E + ++ N + S+ + + ++ + GK +RP+L L TA D Sbjct: 6 KIEQPVAVEFKRFNDEFAASLRSETNRLQSAIDQILNASGKHVRPLLVLLTAKACGQVTD 65 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 N + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A I Sbjct: 66 NTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRSI 125 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +T + + + +S + L+EGE++QL ++ + E Y+ VI+ KTA+L SA E+ S+ Sbjct: 126 QTGNLQIIGIVSNLGRDLSEGEIKQLETAEESIIDESCYMQVIRKKTAMLLSACAEIGSI 185 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 AG + + + +G LG FQ+ DD+ DY + +GK G D R GK TLP++ A Sbjct: 186 SAGASGEMVEKCREFGEYLGYCFQIKDDIFDYF-KEANIGKPTGNDIREGKVTLPLLHAL 244 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 Q G + E IN+ + EN+ + N + E R Y KA + L LP Sbjct: 245 QTGRREEAEHCLHIINEKDFTTENIDLLIDFAKANGGIEYAEQRMQVYHDKAVEVLMTLP 304 Query: 303 DSSWKKSLMEVVDFCLQR 320 +S ++ L+ + D+ ++R Sbjct: 305 ESEAREGLLLLADYIVER 322 >gi|239827501|ref|YP_002950125.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. WCH70] gi|239807794|gb|ACS24859.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. WCH70] Length = 320 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 86/320 (26%), Positives = 161/320 (50%), Gaps = 4/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + D+ V + K + SD + + +L+ +GGKR+RP+ L A Y Sbjct: 3 LKAMYSFLNTDLRAVEKELEKTVQSDYSQLSEAALHLLQAGGKRIRPVFVLLAAKFGTYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD++ +++ Sbjct: 63 IERIKHVAVALELIHMASLVHDDVIDDAELRRGRKTIKAKWNNRFAMYTGDYMFARSLEQ 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + ++ A L+ + GE+ Q+ D YL IK KTA+L +A+ ++ Sbjct: 123 MARLENPLAHRILANTIVEVCRGEIEQIKDKYRFDQNLRCYLRRIKRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ A V + L +G +G++FQ+ DD+LD+ G ++GK G D G TLP + Sbjct: 183 AIAANAAKDVAERLYLFGYYVGMSFQITDDILDFTGTEAKLGKPAGSDLLQGNVTLPALF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + K + + K + +K+ ++++ A+ + + Y QKA L Sbjct: 243 AME--DKHARERITAV--HPKTTPNEMKEIITLIKQTGAIEKSYALSDRYLQKAFRVLET 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP++ + +L ++ + +R Sbjct: 299 LPNNKARSTLYDIAKYIGKR 318 >gi|224061363|ref|XP_002300442.1| predicted protein [Populus trichocarpa] gi|222847700|gb|EEE85247.1| predicted protein [Populus trichocarpa] Length = 420 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 100/325 (30%), Positives = 177/325 (54%), Gaps = 11/325 (3%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTL----ATALMLEY 59 L ++ D++ +N + + ++ ++ + + +GGKR+RP L ATA ++ Sbjct: 101 LFEVVADDLQTLNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEVVGM 160 Query: 60 RG--DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 + H LA IE IHTA+L+HDDV+D+S +RRGK ++G + +VL GDF+ +Q+ Sbjct: 161 KELTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQS 220 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + ++ E ++ +S V A GE++Q S + DV E+YL KTA L +A+ Sbjct: 221 SWYLANLENIEVIKLISQVIKDFASGEIKQASSLFDCDVELEEYLIKSYYKTASLIAAST 280 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + +++ +GV +SV + YG NLG++FQ+VDD+LD+ ++GK G D G T P Sbjct: 281 KGAAIFSGVDSSVSMQMYDYGKNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAP 340 Query: 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 VI A ++ K + I ++ +A +++ + + + A A + Sbjct: 341 VIFALEQSPK-----LREIIESEFCESGSIDEAIELVKSSGGIERAQELAKEKADLAIQN 395 Query: 298 LRCLPDSSWKKSLMEVVDFCLQRLN 322 LRCLP S++ +L E+V + L+R++ Sbjct: 396 LRCLPQGSYQSALEEMVLYNLERIH 420 >gi|297617605|ref|YP_003702764.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297145442|gb|ADI02199.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 322 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 92/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 L +EKV +++ I +++ ++ + +L+ +GGKRLRP L + D Sbjct: 6 LFRDIEPQLEKVEQELVRAITTEISLLKEASVHLVKAGGKRLRPAFVLLSGSFYSSSLDG 65 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 + LA A+E +H ATL+HDDV+D+S RRG+ + WGN+ S+ G+++L+++ ++ Sbjct: 66 LIPLAVALELVHMATLVHDDVIDNSFTRRGQKTVKACWGNRVSLYSGNYILAKSLSLIAA 125 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 + + ++ L+ V+ + EGE+ Q+ ++ +DYL I+ KTA+L S + + +L+ Sbjct: 126 YERPDIIDILATVSMKVCEGEIIQMLSCFDVGQGYKDYLRRIERKTALLMSLSCQTGALV 185 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 G L+ +G LG+AFQ+ DDVLD+ +GK +G D R G TLP + A + Sbjct: 186 GGAPADKVTVLRRFGYYLGMAFQITDDVLDFVASEEVLGKPVGSDIRQGIITLPALYALR 245 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 G + S + + + A ++ + + A SY +KA+ L+ LPD Sbjct: 246 EGKDSQ--LLASILCSPERCKNEAEDAIDMVLSSGGIDYALKVACSYAEKARSLLKSLPD 303 Query: 304 SSWKKSLMEVVDFCLQR 320 + L + +F + R Sbjct: 304 VPARNVLDRIAEFVVTR 320 >gi|307579659|gb|ADN63628.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 309 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 121/310 (39%), Positives = 177/310 (57%), Gaps = 2/310 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M ++ LI R+ SD+ +I + ++I SGGKRLRPMLT+ + G +H LA I Sbjct: 1 MAAIDTLIHDRLTSDIVLINQIADHIICSGGKRLRPMLTMLAGHAIGPTGPHHHQLAAII 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD S LRR + A +WGN SVLVGDFL S++F ++ E + E ++ Sbjct: 61 EFIHTATLLHDDVVDGSELRRSRSTANALWGNAPSVLVGDFLYSRSFQLMTELANLEVMQ 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 L+ ++EGE+ QL N D E YL VI+ KTA+LF+AA ++ +L + + Sbjct: 121 ILAETTNRISEGEVLQLLHVHNPDTDETTYLSVIERKTAILFAAAAQLGALASHADTQTQ 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 + YGM LG AFQ+ DDVLDY +++GKN+G+D GK TLPVI A Sbjct: 181 TRMYEYGMQLGYAFQITDDVLDYTANNSQLGKNLGDDLAEGKATLPVIHAMTHSDAATCE 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I+ G + + + +R +L + RA +Y A+ +L LP++ +L Sbjct: 241 RLRMIISKG--DSDAMPEVLNAIRTTGSLDYSRQRASAYAATAERALDGLPETEAVAALR 298 Query: 312 EVVDFCLQRL 321 + + +QR Sbjct: 299 GLARYAVQRT 308 >gi|332977217|gb|EGK14013.1| heptaprenyl diphosphate synthase [Desmospora sp. 8437] Length = 323 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 96/322 (29%), Positives = 167/322 (51%), Gaps = 3/322 (0%) Query: 1 MKM--LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 MK+ + + +D+ +V + K I +D + +L+ +GGKR+RP+ L + E Sbjct: 1 MKLADIYNSLKQDLREVERELEKSIRTDHRDLNRSAAHLLEAGGKRMRPVFVLLSGKFGE 60 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 Y D +A +E IH ATL+HDDV+DD++ RRG+ + W N+ ++ GD++L ++ Sbjct: 61 YDVDKLKQVAVPLELIHMATLVHDDVIDDASTRRGRPTVKAKWDNRVAMYTGDYILGRSL 120 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 +V + + + LS + GE+ Q+ D + YLH IK KTA+L S + E Sbjct: 121 AIVSQIEDPKIHRVLSPAIYQMCRGEIEQIRDFFATDPSLIRYLHRIKRKTALLMSVSCE 180 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + +L++G + + L+ +G +G+AFQ+ DD+LD G+ +GK G D R G TLPV Sbjct: 181 LGALVSGAAPAEVRRLRLFGYFVGMAFQITDDILDLTGDEQTLGKPAGSDLRQGNITLPV 240 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 I ++G + ++ ++ + L + +R++ + E A Y KA L Sbjct: 241 IHILKKGPEEDRERILQYLHSRG-DAKALPEILRRVRQSDGIPYAEGLARRYLDKALQVL 299 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 LP ++SL + +F R Sbjct: 300 EGLPAGDTRESLRLIAEFVAGR 321 >gi|242399212|ref|YP_002994636.1| Bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sibiricus MM 739] gi|242265605|gb|ACS90287.1| Bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sibiricus MM 739] Length = 341 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 97/334 (29%), Positives = 166/334 (49%), Gaps = 17/334 (5%) Query: 4 LEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L + + ++ V+ +I + I + ++I D ++ +GGKR+RP + L + + + Sbjct: 6 LFEALKEKIKIVDEVIFELIPEKEPKIIYDAARHYPLAGGKRIRPFIVLTSTEAVGGNPE 65 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 V A A+E +H +L+HDD++D RRG+ VWG ++L GD L S+ F V Sbjct: 66 KAVYAAAAVELLHNYSLVHDDIMDMDEKRRGRPTVHKVWGVNMAILAGDLLFSKVFEAVA 125 Query: 123 ETKSQ-----EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + + L+ +S + L EG+ R L VT ++Y+ +I KT L A+ Sbjct: 126 KIPVEAEKVVKVLDVISKTSNELCEGQARDLEFENKETVTIDEYMKMISGKTGALIDASA 185 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 + LI N QAL YG N+GIAFQ+ DDVLD + ++GK +G D R GK T+ Sbjct: 186 TIGGLIGTENNEYIQALSKYGRNVGIAFQIWDDVLDLIADEEKLGKPVGSDIRKGKKTII 245 Query: 238 VILAFQRGTKREKNFWKSTINDGKISV-----------ENLKKAFIIMRENRALVDTEYR 286 V + ++ +K + V E +KKA ++++ + Sbjct: 246 VAHFLENASEEDKLKFFKVFGKYAGDVKGEGIIEEDIQEEVKKAIDLLKKYGSTDYAANL 305 Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A ++AK++L+ LP+S +K L + DF ++R Sbjct: 306 ARKLIEEAKEALKALPESEARKHLELLADFIVER 339 >gi|124027425|ref|YP_001012745.1| geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM 5456] gi|123978119|gb|ABM80400.1| Geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM 5456] Length = 336 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 95/316 (30%), Positives = 165/316 (52%), Gaps = 9/316 (2%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 V+ I ++ + + + D +LI +GGKRLRP + +A A L + + A A+E + Sbjct: 20 VDGYIYAKVKGEPKEVYDAGLHLIRAGGKRLRPAIVVAIAEALGEPAERALPFAAAVELV 79 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET--------KS 126 H TL+HDD++D RRG VWG ++ GD L ++AF + + + Sbjct: 80 HNFTLIHDDIMDRDEFRRGVPTVHKVWGEPLAITAGDLLFAKAFETLTDALDKGIPPDRV 139 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 A LS + +AEG+ L + +V+ ++YL +I KT LF A+ + L+A Sbjct: 140 ARATRVLSRASAVIAEGQAMDLMFEEEDEVSIDEYLIMIYKKTGALFEASAVLGGLVATG 199 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 ++ + L +G NLGIAFQ+ DD+L G+ E+GK + D R GK TLP+I A + Sbjct: 200 DDATLEKLAEFGKNLGIAFQIRDDILGIVGKEEELGKPVYSDIREGKKTLPIIYALRNLE 259 Query: 247 KREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR-CLPDSS 305 ++ + + + S E L++A ++ + A+ E +A Y +A ++LR +P+++ Sbjct: 260 DEDREKLVMVLGNREASREELEQAAKLVVASGAIDYAESKAREYIDRALEALRGAVPENN 319 Query: 306 WKKSLMEVVDFCLQRL 321 +++ L E+ F R Sbjct: 320 YRRILEELAKFVATRT 335 >gi|319795463|ref|YP_004157103.1| polyprenyl synthetase [Variovorax paradoxus EPS] gi|315597926|gb|ADU38992.1| Polyprenyl synthetase [Variovorax paradoxus EPS] Length = 330 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 132/299 (44%), Positives = 187/299 (62%), Gaps = 2/299 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL DM +V+ +I +R+ + V ++ V +Y+I +GGKRLRP L L + L Y G+ Sbjct: 16 DLIAGDMVEVDRVIARRLDTGVPLVSQVSQYIISAGGKRLRPALLLLMSGALGYTGEQRF 75 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M+++ Sbjct: 76 NLAAVVEFIHTATLLHDDVVDESTLRRGRATANESFGNPASVLVGDFLYSRAFQMMLDAN 135 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + +E L+ +AEGE+ QL + + E YL VI+SKTA LF A+ +++++AG Sbjct: 136 NIRVMEILAEATNVIAEGEVLQLMNMHDASLDETAYLRVIRSKTAKLFEASTRLAAVLAG 195 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 V V +A +YG LG AFQ++DDVLDY G+ +E GKN+G+D R GK TLP+I A QRG Sbjct: 196 VTPEVEEACATYGQALGTAFQVIDDVLDYAGDAHETGKNVGDDLREGKTTLPLIFAMQRG 255 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 T + ++ I G + L K I+RE AL + A + ++A D+LR P + Sbjct: 256 TPEQSGLVRAAIEAGDTA--QLGKVVEIVRETGALDASRAAAAAEAKRAIDALRDFPSN 312 >gi|254523411|ref|ZP_05135466.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14] gi|219721002|gb|EED39527.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14] Length = 332 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 129/322 (40%), Positives = 190/322 (59%), Gaps = 2/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ L DM V+ LI +R+ SDV +I + ++I +GGKRLRPML + + + Sbjct: 13 LPQIQSLAAADMAAVDALIRRRLSSDVVLINQIADHIISAGGKRLRPMLVMLAGHAVGHA 72 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G +H LA IEFIHT+TLLHDDVVD+S LRRG+ A +WGN SVLVGDFL S++F + Sbjct: 73 GPDHHQLAAIIEFIHTSTLLHDDVVDESNLRRGRSTANALWGNAPSVLVGDFLYSRSFQL 132 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++E + ++ L+ +AEGE+ QL N D E YL VI+ KTAVLF+A + Sbjct: 133 MVELERMPVMQILADATNRIAEGEVLQLLHVHNPDTDETAYLRVIERKTAVLFAAGTRLG 192 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L +GV + +QAL YGM+LG AFQ+ DDVLDY +E+GKN+G+D GK TLP+I Sbjct: 193 ALASGVDEATQQALFDYGMHLGYAFQIADDVLDYSANADELGKNLGDDLAEGKATLPLIH 252 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + ++ + DG S + + +R L + RA Y + A+ +L Sbjct: 253 AMAHSDDATRERLRAIVQDGDAS--AMPEVLAAIRATGGLEYSRRRAEEYAEAAERALDG 310 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 L D+ +L + + +QR + Sbjct: 311 LADNDAVAALRGLARYAVQRSH 332 >gi|148284169|ref|YP_001248259.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Boryong] gi|146739608|emb|CAM79381.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Boryong] Length = 338 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 120/325 (36%), Positives = 195/325 (60%), Gaps = 4/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 + L + KDM +VN +IL I S E +I +V Y +GGKR+RPMLT+ + + Y Sbjct: 13 IDKLSNFLDKDMSEVNNVILNCISSSQEQLIYEVGTYFFNAGGKRIRPMLTIIISKLFNY 72 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G +H LA A+E IH+ATLLHDDVVD+S +RR L W +TS+L+GDFL SQ+F Sbjct: 73 HGLSHYYLAAAVELIHSATLLHDDVVDESKMRRSHPTVHLKWDTKTSILIGDFLFSQSFK 132 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALE 178 ++I++ S AL++ SL T+ GE++QL+ N +TE++Y VI++KTA LF + E Sbjct: 133 LMIKSNSIRALKSFSLSFNTIITGEVKQLTQLHNQKIITEDEYFRVIQAKTAELFGTSCE 192 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 ++++I+ +K++G+ LG+ FQ+VDD+LDY G + +GKN+G+DF GK TLP+ Sbjct: 193 IAAIISNQSAPTCLLVKTFGIKLGLIFQIVDDILDYFGNSDSLGKNVGDDFMEGKVTLPI 252 Query: 239 ILAFQ-RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I+A+ ++ E++FW + + ++ K A ++ + L + + Q+ D Sbjct: 253 IMAYNCASSQNERDFWHRIFLNREQKEDDFKHALSLLYTHNVLALIKQKISQLEQQVYDI 312 Query: 298 LRCLPDS-SWKKSLMEVVDFCLQRL 321 + L S +K L + + + R+ Sbjct: 313 ITKLNISLEYKNYLENLTKYIINRI 337 >gi|119502964|ref|ZP_01625049.1| Conserved hypothetical phage tail region protein [marine gamma proteobacterium HTCC2080] gi|119461310|gb|EAW42400.1| Conserved hypothetical phage tail region protein [marine gamma proteobacterium HTCC2080] Length = 321 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 118/320 (36%), Positives = 186/320 (58%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + + ++VN LI++++ SDV M+ +V Y++ +GGKRLRP+L L A Sbjct: 2 ITSIRACVADEFQQVNELIIEQLKSDVAMVENVGHYIVDAGGKRLRPLLALLAASAQGGV 61 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + + A +EFIHTATLLHDDVVD S+LRRG+ A +GN SVLVGDF+ ++AF + Sbjct: 62 DLSDIKFAAVVEFIHTATLLHDDVVDLSSLRRGRATANAEFGNAPSVLVGDFIYTRAFQL 121 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 +++ L++++ T+A GE+ QL + + VTE YL VI KTA LF+AA S Sbjct: 122 MVKLGDLSLLQSMADTTNTIAAGEVLQLMRAGDPSVTESQYLDVIDRKTAALFAAACRGS 181 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G + ++ + +YG +LGIAFQ++DDVLDY G+ GK +G+D GKPTLP+I Sbjct: 182 AILKGRDTTQQEQMAAYGRHLGIAFQMIDDVLDYTGDPQVTGKQVGDDLNEGKPTLPLIH 241 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 G+ + + ++ ENL +R + + T +A + Q A +L+ Sbjct: 242 TMASGSADDAAIVRDALSQKN--SENLTGVIAAVRRSGGIDYTREQAVLHQQSALAALKG 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 L S ++L E+ D + R Sbjct: 300 LDRSPALEALHELADMAINR 319 >gi|86134465|ref|ZP_01053047.1| polyprenyl synthetase [Polaribacter sp. MED152] gi|85821328|gb|EAQ42475.1| polyprenyl synthetase [Polaribacter sp. MED152] Length = 325 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 100/315 (31%), Positives = 169/315 (53%), Gaps = 4/315 (1%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYRGDNHV 65 K+ME + S V ++ + Y++ GK++RPM A M+ + Sbjct: 11 IKKEMELFEKKFKDSMLSKVPLLNRITYYIVRRKGKQMRPMFVFLVAKMVSNGGFDERTY 70 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 A +E IHTATL+HDDVVDDS RRG + +W N+ +VLVGDFLLS+ + I+ + Sbjct: 71 RGASVVELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDFLLSKGLLLSIDNE 130 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + L+ +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A + + G Sbjct: 131 DFDLLKLISIAVREMSEGELLQIEKARKLDITEDIYFDIIRQKTATLIAACCGIGAASVG 190 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 Q ++ +G +GIAFQ+ DD+ DY ++GK G D + K TLP+I Sbjct: 191 ANQDTVQQMRKFGEYIGIAFQIKDDLFDY--SDEKIGKPTGIDIKEQKMTLPLIHTLNNC 248 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS 305 + +EK + +T+ + +K+ ++EN + T + +Y KA L +S Sbjct: 249 SAKEKAWIINTVKKHNKNKVRVKELIAFVKENGGIDYTISQMNAYKSKAIAILNNYSESP 308 Query: 306 WKKSLMEVVDFCLQR 320 +K SL++++D+ ++R Sbjct: 309 YKASLLQMIDYVVER 323 >gi|251772722|gb|EES53284.1| trans-hexaprenyltranstransferase [Leptospirillum ferrodiazotrophum] Length = 332 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 105/309 (33%), Positives = 177/309 (57%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 M V + + V + ++ Y++ GGKRLRP+L + ++ + G +LLA + Sbjct: 22 MAAVEEKLHAILTGIVPLASEMTSYVVSGGGKRLRPLLMVISSRLSGAEGPEPILLAAVV 81 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 E IHTATLLHDDVVD++ +RRGK AA WGNQ ++LVGDFL + + + + S E + Sbjct: 82 EMIHTATLLHDDVVDNADVRRGKKAAHQRWGNQPAILVGDFLYANSLWLAMGLHSHEVND 141 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 +L+L ++EGE+ +L L NL+ TE+ Y +V KTA L ++ + ++ G+ + + Sbjct: 142 SLTLACKKMSEGEILELFLDGNLEATEDQYYNVAACKTATLTASTCRLGGILGGLSDEEK 201 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 +AL +G +G+AFQ+ DD LDY ++GK +G D GK TLP+I + ++ Sbjct: 202 EALDRFGYYVGMAFQVADDALDYMASEEKLGKTLGRDLSEGKMTLPLIHCLATSSAESRS 261 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + + G+I +L + +M++ ++ + RA + +KA++SL C S K+ L+ Sbjct: 262 RLVTKVGSGEIRNGDLDEVLRLMKDTGSIEYSLGRAREFTRKAQESLECFSHSLPKQHLL 321 Query: 312 EVVDFCLQR 320 + DF + R Sbjct: 322 ALSDFVISR 330 >gi|23099243|ref|NP_692709.1| heptaprenyl diphosphate synthase component II [Oceanobacillus iheyensis HTE831] gi|22777472|dbj|BAC13744.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Oceanobacillus iheyensis HTE831] Length = 323 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 90/322 (27%), Positives = 169/322 (52%), Gaps = 1/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + KDME + + I ++ ++ D L+ +GGKR+RP+ L ++ + Y Sbjct: 3 LPKIYGFLKKDMESIESALQDSIQANHPVLRDASTELLHAGGKRIRPVFVLLSSQLGNYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 +A +E IH ATL+HDDV+D++ LRRGK ++GN+ ++ GD++L++A Sbjct: 63 LSKIKKVAVTLELIHMATLVHDDVIDEAELRRGKPTTASIYGNRVAMYTGDYILARALEE 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + LS ++ GE+ Q+ N + DYL IK KTA+L +++ ++ Sbjct: 123 ITEIPDPRVHQLLSKTLVEVSIGEIEQIEYKFNWEQNFRDYLRRIKRKTALLIASSCKLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ G+ + L YG +G+++Q++DD+LD+ E+GK G D G TLPV+ Sbjct: 183 AIVGGLNDYQTNKLYQYGYYIGMSYQIIDDILDFTSTSKELGKPAGNDLLQGNITLPVLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T ++ + + DG ++ +K ++ A+ + + Y KA +L Sbjct: 243 AMEDKTFKQ-SLFNVFSKDGHVTTNEMKTLIQHLKRTDAIKRSYAVSDMYLSKALTALDE 301 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 +P S KK+L ++ + +R + Sbjct: 302 IPASRAKKTLQDIATYIGKRRS 323 >gi|194016766|ref|ZP_03055379.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus ATCC 7061] gi|194011372|gb|EDW20941.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus ATCC 7061] Length = 320 Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 90/320 (28%), Positives = 166/320 (51%), Gaps = 4/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y Sbjct: 3 LKAMISFLNHDIDIIEKELEQTVRSDYALLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++ +++ Sbjct: 63 INKIKYVAVALELIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMFARSLEY 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + A E LS + L GE+ Q+ N+D YL IK KTA+L + + ++ Sbjct: 123 MTKINHPMAHEILSKMVVELCLGEIEQVKDKYNMDQNLRTYLRRIKRKTALLIAGSCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AG +AL +G +G+++Q++DDVLD+ E+GK +G D G TLPV+ Sbjct: 183 AIAAGTDEKTHKALYWFGYYVGMSYQIIDDVLDFTSTEEELGKPVGGDLLQGNVTLPVLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T + + + + LK +++ A+ + + Y +KA + L Sbjct: 243 ALKNPTLEGQLKLI----NSETTETQLKPVIEHLKQTDAIDRSIRVSEMYLKKAFEQLDK 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP K SL + + +R Sbjct: 299 LPRGRAKTSLASIAKYIGKR 318 >gi|283780902|ref|YP_003371657.1| polyprenyl synthetase [Pirellula staleyi DSM 6068] gi|283439355|gb|ADB17797.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068] Length = 349 Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 90/322 (27%), Positives = 158/322 (49%), Gaps = 3/322 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L +M+ + + + S + ++V+Y GGKRLRP L L T L Sbjct: 31 LNTLYAPVAAEMQLIEQRLRTELSSKHPFVDELVRYGCLLGGKRLRPALLLLTGKALGGI 90 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 H+ LA +E IHTATL+HDDV+D++ +RR W N++SVL+GD+L + AF + Sbjct: 91 TPAHLTLATVVEMIHTATLVHDDVLDEAKVRRHLATVNARWDNESSVLLGDYLFTHAFHL 150 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + + EGEL Q N +T+ +Y +I+ KTA L + + + Sbjct: 151 ASTLDTVVGCRVIGRATNIVCEGELLQKGSRGNFRLTQSEYFEIIEGKTAELTACSCYLG 210 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + V + +G +LGIAFQ+ DD+LD GE GK++G D KPTLP+I Sbjct: 211 AHFSAASVEVCDQMDGFGRDLGIAFQIADDLLDVLGEEKATGKSLGTDLEKQKPTLPLIY 270 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 ++ + ++ ++ ++K+ + + + +A Y ++A L Sbjct: 271 TLEKASSHDRQELVEILSSESR---DMKQILPFIIKYGGIEFAREQAIRYARRAAGRLEY 327 Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322 LP+ + + +L + +F + R + Sbjct: 328 LPNGNCRDTLQTMAEFVVSRSS 349 >gi|1707833|emb|CAA69541.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus solfataricus P2] Length = 332 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 105/315 (33%), Positives = 175/315 (55%), Gaps = 10/315 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 VNF I + S+ + + + +L +GGKRLRP++ ++++ ++ + A A+E + Sbjct: 17 VNFRIKNFVKSNFKTLEEASFHLFTAGGKRLRPLVLVSSSDLIGGDRERAYKAAAAVEIL 76 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-------KSQ 127 H TL+HDD++D+ LRRG + WG ++L GD+L ++AF + E+ Sbjct: 77 HNFTLVHDDIMDNDGLRRGLPTVHVKWGEPMAILAGDYLHAKAFESLNESLKGLDGNTFY 136 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A ++EG+ +S LDVTEE+Y+ +IK KTA+LFS + + +I Sbjct: 137 KAFSIFITSIEIISEGQAMDMSFENRLDVTEEEYIQMIKGKTAMLFSCSAALGGIINKAN 196 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + V + L YG+NLGI+FQ+VDD+L G+ E+GK I D R GK T+ VI T+ Sbjct: 197 DDVVKKLTEYGLNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTILVIKTLSEATE 256 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--S 305 EK ST+ + + E+L++A I+R++ +L A Y A ++LR +P S + Sbjct: 257 DEKKILVSTLGNKEAKKEDLERASEIIRKH-SLQYAYDLAKKYSDLAIENLREIPVSNKT 315 Query: 306 WKKSLMEVVDFCLQR 320 +K+L + F +QR Sbjct: 316 AEKALKYLAQFTIQR 330 >gi|71066129|ref|YP_264856.1| octaprenyl-diphosphate synthase [Psychrobacter arcticus 273-4] gi|71039114|gb|AAZ19422.1| probable octaprenyl-diphosphate synthase [Psychrobacter arcticus 273-4] Length = 349 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 115/322 (35%), Positives = 189/322 (58%), Gaps = 7/322 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGD 62 ++ + D E ++ + + S V+++ +V +++I +GGKR+RP++TL A M + Sbjct: 30 IQSIVADDFEIMDKQVFGSLNSKVQLVMNVSQHVINAGGKRMRPLITLLCARMFNDEPSQ 89 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + LA E +HTATL+HDDV+D+S RRGK A W N T+VLVGD+L+++AF +++ Sbjct: 90 QAMHLAAITEMLHTATLVHDDVIDESGQRRGKATANATWDNATAVLVGDYLIARAFNLLV 149 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +S L+ S C +AEGE+ QL N + TE+DYL++I KT+ LF A + +++ Sbjct: 150 GFQSLPLLQVFSDGTCDIAEGEVLQLQHQHNPEATEQDYLNIIDGKTSRLFMMATQGAAI 209 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + G Q QAL +G + G AFQ++DDVLDY G+ MGKN+G+D GKPTLP I A Sbjct: 210 LQG-QIQHLQALADFGQHFGNAFQIIDDVLDYSGDSELMGKNLGDDLAEGKPTLPTIKAL 268 Query: 243 Q---RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + K + + + GK N ++ ++R + +L + RA + A+ +L Sbjct: 269 ELLKDSNKEDYEQLRIAVQTGKT--PNAEQLIALVRHSGSLEYCKQRALEETKLAQQALS 326 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 LPD+ +++ L ++ + RL Sbjct: 327 SLPDNRYRQGLYQLTELASARL 348 >gi|134294668|ref|YP_001118403.1| trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4] gi|134137825|gb|ABO53568.1| Trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4] Length = 331 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 125/313 (39%), Positives = 176/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 19 IASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVL 78 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 79 AAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 138 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + ++++G Sbjct: 139 RVMEILSEATTIISEGEVLQLLNMHDADVDESRYMQVIRYKTAKLFEASARLGAVLSGAD 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTP 258 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 259 EQAALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECARQEAQAAAAAIATFPDSIYK 316 Query: 308 KSLMEVVDFCLQR 320 +SL+ + + R Sbjct: 317 ESLLGLCSYSTSR 329 >gi|319941776|ref|ZP_08016098.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B] gi|319804709|gb|EFW01576.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B] Length = 332 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 113/313 (36%), Positives = 178/313 (56%), Gaps = 3/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DM+ V+ I + SDV + ++ +Y+ +GGKR+RP L + + L Y+GD L Sbjct: 21 IADDMKAVDDYIRAELASDVSRMHEISEYITSAGGKRMRPALLILISRALGYKGDLCCYL 80 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 IE +HTATL+HDDVVD+S LRRG+ A WGN +VLVGDFL +++F M++ + Sbjct: 81 GATIELLHTATLMHDDVVDESNLRRGRPTANARWGNGAAVLVGDFLYTRSFQMMVRAGNL 140 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++AL+ A L+EGE+ Q+ + + V E Y VI+ KTA LF A +++ IA Sbjct: 141 RVMQALADAANRLSEGEVVQMVNAHDPSVDETRYFRVIERKTACLFEAGARMAAAIAECS 200 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +A+ Y + LG AFQ+ DD+LDY G ++GKN+G D R GK TLP+I + T Sbjct: 201 KEQEEAVAQYALALGNAFQIADDILDYTGVAADIGKNLGADLREGKMTLPLIYTRELTTP 260 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + G + + K ++ + AL RA + ++ + +L LP S + Sbjct: 261 EGRALIDEAVRKGDGPFDKITK---LVVDCGALDRCSLRAEAELERGRQALAKLPPSIFN 317 Query: 308 KSLMEVVDFCLQR 320 +SL+E++ F ++R Sbjct: 318 ESLLELLSFTVRR 330 >gi|126663213|ref|ZP_01734211.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38] gi|126624871|gb|EAZ95561.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38] Length = 326 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 102/326 (31%), Positives = 177/326 (54%), Gaps = 8/326 (2%) Query: 1 MKMLEDL---TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 MK+ E + +ME + S V ++ + Y++ GK++RPM TA M+ Sbjct: 1 MKITEQIKLPIASEMELFEEKFRDSMSSKVALLNRITHYIVNRKGKQMRPMFVFLTAKMV 60 Query: 58 --EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLS 115 + A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGDFLLS Sbjct: 61 SGGSIDERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDFLLS 120 Query: 116 QAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSA 175 + + I+ + L+ +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A Sbjct: 121 KGLLLSIDNNDFDLLKIISVAVREMSEGELLQIEKARRLDITEDIYYEIIRQKTATLIAA 180 Query: 176 ALEVSSL-IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + +A +V + ++ +G +G+AFQ+ DD+ DY + +GK G D + K Sbjct: 181 CCSLGACSVAPDDKAVVEKMRKFGELIGMAFQIKDDLFDYTDDA--IGKPTGIDIKEQKM 238 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 TLP+I A + +EK++ ++I + + +K+ +++ L E + + Q+A Sbjct: 239 TLPLIYALNNCSSKEKSWVINSIKNHNKDKKRVKEVIQFVKDKNGLTYAENKMIQFQQEA 298 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320 + P S +K SL+ +V++ ++R Sbjct: 299 LQLITDFPSSPYKDSLILMVNYVIER 324 >gi|78065141|ref|YP_367910.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383] gi|77965886|gb|ABB07266.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383] Length = 331 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 127/313 (40%), Positives = 177/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 19 ITSDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVL 78 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 79 AAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 138 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 139 RVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGAD 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G V MGKN G+D R GKPTLP+I +RGT Sbjct: 199 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTVEAMGKNAGDDLREGKPTLPLIYLIERGTP 258 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 259 EQSALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECARQEAQAAAAAIAAFPDSVYK 316 Query: 308 KSLMEVVDFCLQR 320 +SL+ + + R Sbjct: 317 ESLLALCSYSTSR 329 >gi|150009558|ref|YP_001304301.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503] gi|256838290|ref|ZP_05543800.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp. D13] gi|149937982|gb|ABR44679.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503] gi|256739209|gb|EEU52533.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp. D13] Length = 324 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 104/319 (32%), Positives = 167/319 (52%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + +E+ + E+ N + S+ + + ++ S GK +RP+L L TA + Sbjct: 5 RKIEEPVSAEFERFNKDFEASLRSETTRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVT 64 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A Sbjct: 65 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 124 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 I+T + +S + L+EGE++QL ++ + E YL VIK KTA L SA E+ + Sbjct: 125 IQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGA 184 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G V + +G LG FQ+ DD+ DY + +GK G D R GK TLP++ A Sbjct: 185 ISSGASAEVIALCREFGEYLGYCFQIKDDIFDYF-KEANIGKPTGNDIREGKVTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++G + E + I EN+ + N + E R Y KA D L L Sbjct: 244 LRQGREEEAARYLDMILRKDFGAENVDSLIEFAKANGGIEYAEARMKEYHDKAVDVLLRL 303 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S + SL+++ D+ + R Sbjct: 304 PESEARTSLIQLADYIMTR 322 >gi|58040424|ref|YP_192388.1| decaprenyl diphosphate synthase [Gluconobacter oxydans 621H] gi|58002838|gb|AAW61732.1| Decaprenyl diphosphate synthase [Gluconobacter oxydans 621H] Length = 315 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 130/313 (41%), Positives = 194/313 (61%), Gaps = 4/313 (1%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR----GDNHVLL 67 M+ N I+ R+ S V +IP + +L+ +GGKRLRP+LTLA++ + Y+ HV L Sbjct: 1 MQACNRAIIARMESPVPLIPQLGAHLVAAGGKRLRPLLTLASSRLCGYKSTPENQRHVGL 60 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG +A V+GN+ SVLVGDFL +++F ++ S Sbjct: 61 AACVEFIHTATLLHDDVVDESNLRRGLASANAVFGNKASVLVGDFLFARSFQLMTADGSL 120 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 + + LS + T+AEGE+ Q+ +L + YL VI KTA LF+AA V +++A Sbjct: 121 KVMAILSDASATIAEGEVLQMVTQNDLSTPVDRYLEVIHGKTAALFAAACRVGAVVADRP 180 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + AL +G NLG+AFQLVDD LDY + +GK +G+D R GK TLPV+ A++ G+ Sbjct: 181 EAEELALDRFGTNLGMAFQLVDDALDYAADQQILGKTVGDDMREGKITLPVLAAYEAGSA 240 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ FW+ I G+ + +L A ++ + A+ T RA +Y +A D+L PDS + Sbjct: 241 EDRAFWERVIEKGEQTEADLPHALALIEKTGAIATTIARAQAYAAEAVDALSIFPDSELR 300 Query: 308 KSLMEVVDFCLQR 320 + + E V + + R Sbjct: 301 RLMTETVQYTVDR 313 >gi|124008499|ref|ZP_01693192.1| polyprenyl synthetase [Microscilla marina ATCC 23134] gi|123986007|gb|EAY25857.1| polyprenyl synthetase [Microscilla marina ATCC 23134] Length = 324 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 97/320 (30%), Positives = 168/320 (52%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ M + SDV ++ ++ Y++ GK++RPM +A Sbjct: 5 IKDIQAPIQDVMANFEGKFRSFMKSDVFLLDKIMNYIVKRKGKQMRPMFVFLSAGTGGEI 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + A IE +HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + Sbjct: 65 NEMAYRGAALIELLHTATLVHDDVVDDSNYRRGFFSINALWKNKIAVLVGDYLLSRGLLL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 I+ + E L+ +S ++EGEL Q++ ++ LD+TEE Y +I+ KTA L ++ V Sbjct: 125 SIDNEDFEQLKIVSNAVREMSEGELLQIAKARRLDITEEVYYDIIRQKTASLIASCCAVG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + AG+ + +G +G+AFQ+ DD+ DY E+GK +G D + K TLP+I Sbjct: 185 ASAAGLNKEQISMFREFGEKVGMAFQIKDDLFDY--GTAEIGKPLGIDIKEKKMTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + EK + + + +K+ ++++ + + Y +A + Sbjct: 243 ALNHAKRSEKRHIINLVKNKSHKSAKVKEVIAFVKDSGGIEYSNEVMRRYSNEAIALMND 302 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P+S +K SL+++V F ++R Sbjct: 303 FPESDYKTSLIQLVQFTIER 322 >gi|295398947|ref|ZP_06808929.1| heptaprenyl diphosphate synthase component II [Geobacillus thermoglucosidasius C56-YS93] gi|312110446|ref|YP_003988762.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y4.1MC1] gi|294978413|gb|EFG54009.1| heptaprenyl diphosphate synthase component II [Geobacillus thermoglucosidasius C56-YS93] gi|311215547|gb|ADP74151.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y4.1MC1] Length = 321 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 85/320 (26%), Positives = 164/320 (51%), Gaps = 3/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + D+ V + + + SD + + +L+ +GGKR+RP+ L A Y Sbjct: 3 LKAMYSFLNADLRAVEKELEETVRSDYAQLSEAALHLLQAGGKRIRPVFVLLAAKFGTYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD++ +++ + Sbjct: 63 IERVKHVAVALELIHMASLVHDDVIDDAELRRGRQTIKAKWSNRFAMYAGDYMFARSLEL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + ++ A L+ + GE+ Q+ D YL IK KTA+L +A+ ++ Sbjct: 123 MTRLENPLAHRILANTIVEVCRGEIEQIKDKYRFDQNLRCYLRRIKRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ A L +G +G++FQ+ DD+LD+ G ++GK G D G TLPV+ Sbjct: 183 AIAANAAKRTADRLYLFGYYVGMSFQITDDILDFTGTEAQLGKPAGSDLLQGNVTLPVLF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + +R + + ++ K + + +K+ ++++ A+ + + Y QKA L Sbjct: 243 AME--DERVRERITAAVH-PKTTPDEMKEIIALIKQTDAIEKSYALSDRYLQKAFRVLET 299 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + + +L ++ + +R Sbjct: 300 LPKNKARSTLYDIAKYIGKR 319 >gi|332978343|gb|EGK15068.1| octylprenyl diphosphate synthase [Psychrobacter sp. 1501(2011)] Length = 343 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 109/322 (33%), Positives = 184/322 (57%), Gaps = 7/322 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGD 62 ++ + D ++ + + S V+++ V +++I +GGKR+RP++TL + + + + + Sbjct: 24 IQQIIADDFAIMDKQVFGSLNSKVQLVMSVSQHVINAGGKRMRPLITLLCSRLCRDEQSE 83 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + + LA E +HTATL+HDDV+D+S LRRG A W N T+VLVGD+L+++AF +++ Sbjct: 84 DAMHLAAITEMLHTATLVHDDVIDESGLRRGHPTANATWDNPTAVLVGDYLIARAFNLLV 143 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +S L+ S C +AEGE+ QL N TE+DY+ +I KT+ LF A Sbjct: 144 GFQSLPLLKLFSDGTCDIAEGEVLQLQHQHNPQATEDDYMRIIDGKTSRLFMMAT-CGVA 202 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 I + Q +G + G AFQ++DDVLDY G+ MGKN+G+D GKPTLP I+A Sbjct: 203 ILQDKPEFMQPFSDFGQHFGNAFQIIDDVLDYTGDSEVMGKNLGDDLAEGKPTLPTIVAL 262 Query: 243 Q---RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 + + + N + + GK V++ + +++E+ AL RA + A+ +L Sbjct: 263 RLLKQSDEANYNKLRIAVQTGK--VDDAQGLIKLVQESDALEYCRERALEETRLAQQALS 320 Query: 300 CLPDSSWKKSLMEVVDFCLQRL 321 LPD+ +++ L ++ + RL Sbjct: 321 QLPDNQYRQGLWQLTELASARL 342 >gi|88607042|ref|YP_505772.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ] gi|88598105|gb|ABD43575.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ] Length = 316 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 122/320 (38%), Positives = 196/320 (61%), Gaps = 6/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 MK+ L +++++ LI+K+ S+V++I D++++LI SGGKR RP++ LA ML Sbjct: 1 MKL---LVASELQEMESLIVKQRHSEVQLIADIIQHLILSGGKRTRPVMLLAACGMLGCT 57 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 +++A AIEF+H+ATLLHDDVVD S +RRG A +WGN+ S+LVGDFL + AF Sbjct: 58 DARRIVVAAAIEFLHSATLLHDDVVDKSDMRRGVETANSIWGNKASILVGDFLFATAFQW 117 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S + L LS A + GE++QL S +LD++ YL +I SKTAVLFSAA E + Sbjct: 118 IVSCNSIQLLSVLSNTASIIVSGEMQQLVHSSSLDISRTKYLEIISSKTAVLFSAACESA 177 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +++ V R AL+ +G N GI FQ++DD+LDY NE+GK D +GK TLP+I+ Sbjct: 178 AVLHDVGTLQRNALRDWGFNFGIVFQILDDILDYTANQNELGKRTYNDIVSGKVTLPLII 237 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A++ +++++ + ++ + + AF + A+ + A Y A+ L Sbjct: 238 AYEGASEKDRIGLRGALSRERPDPDL---AFSYIMAQNAIEKSVGLAKEYIAIAEKQLSH 294 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PDS++K+ L+ +++ + R Sbjct: 295 FPDSAYKQKLLNLLNSAVNR 314 >gi|193212799|ref|YP_001998752.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] gi|193086276|gb|ACF11552.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] Length = 324 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 101/315 (32%), Positives = 167/315 (53%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 ++++ + S ++ V +Y++ GK++RP L + A + GD Sbjct: 10 VAEELKLFQERYKTVLHSSNTLVDKVTRYVLRQQGKQIRPTLVILGAKVCGGVGDVTYRG 69 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +E +H+ATL+HDDVVD + +RRG + +W N+ SVL+GD+LLS+ +E Sbjct: 70 AIMVELLHSATLIHDDVVDGAEMRRGIPSINALWKNKISVLIGDYLLSKGLLYSLENSDY 129 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +L +S ++EGE+ Q+ +++LD+TEEDYL VI KT L + + + + A Sbjct: 130 RSLHLVSEAVRRMSEGEILQIQKTRSLDITEEDYLSVIADKTGSLIATSCAIGAASATDS 189 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 LK YG LG+AFQ+ DD+LDY G+ + GK +G D ++ K TLP+I A ++ K Sbjct: 190 EEEIARLKHYGEFLGLAFQIRDDLLDYTGDSKKTGKQLGIDIKDRKITLPLIYALRQSDK 249 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 E+N KS + K + + L A + KA +S+ P+S + Sbjct: 250 AEQNKIKSILKSSKKRSVRSGEVIDFVTRKGGLEYAATVAEGFADKALESIANFPESPAR 309 Query: 308 KSLMEVVDFCLQRLN 322 +SL +VDF ++R + Sbjct: 310 RSLELLVDFVMKRQH 324 >gi|107021658|ref|YP_619985.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054] gi|116688604|ref|YP_834227.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424] gi|170731903|ref|YP_001763850.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3] gi|105891847|gb|ABF75012.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054] gi|116646693|gb|ABK07334.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424] gi|169815145|gb|ACA89728.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3] Length = 331 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 126/313 (40%), Positives = 176/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 19 ITSDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVL 78 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 79 AAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 138 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 139 RVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGAD 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTP 258 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 259 EQSALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECARQEAQAAAAAIAAFPDSIYK 316 Query: 308 KSLMEVVDFCLQR 320 +SL+ + + R Sbjct: 317 ESLLGLCSYSTSR 329 >gi|325955525|ref|YP_004239185.1| trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922] gi|323438143|gb|ADX68607.1| Trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922] Length = 325 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 99/318 (31%), Positives = 169/318 (53%), Gaps = 1/318 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 +++ +M+ + + S+V ++ + Y++ GK++RPM A ML + Sbjct: 7 LIKAPIANEMKLFEDKFFESMKSNVSLLDRITYYIVRRKGKQMRPMFVFLIAKMLGEVNE 66 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 A IE IHTATL+HDDVVDDS +RRG + +W N+ +VLVGD+ LS+ + Sbjct: 67 KTYRAASFIELIHTATLVHDDVVDDSHMRRGFFSLNALWKNKIAVLVGDYFLSKTLIIST 126 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + K + LE +S+ ++EGEL Q+ ++ LD+TEE Y +I+ KTA L +A + +L Sbjct: 127 QNKDFDLLETVSVAIKEISEGELLQIEKARKLDITEEVYFEIIRMKTATLIAACCKAGAL 186 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 N V + L +G +GIAFQ+ DD+ DY N +GK +G D + K TLP+I Sbjct: 187 SVSSDNMVAERLHKFGELVGIAFQIKDDLFDYTQ-SNLIGKPVGIDIKEQKMTLPLIYTL 245 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 TK K + ++ + + +++ +++N + T+ Y Y +A L P Sbjct: 246 NTTTKENKKWLIQSVKKHNNNKKRVREVIEFVKQNGGIEYTKKMMYQYANEAIAILHEFP 305 Query: 303 DSSWKKSLMEVVDFCLQR 320 + + +L +V + ++R Sbjct: 306 QNECRDALELMVQYVMER 323 >gi|86607946|ref|YP_476708.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556488|gb|ABD01445.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 320 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 102/318 (32%), Positives = 171/318 (53%), Gaps = 8/318 (2%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD---NH 64 D+E++ + + + + ++ ++L +GGK +RP + L A G+ H Sbjct: 8 VEADLERLRQNLTRLVSAKHPILAMAAEHLFSAGGKGIRPAIVLLIARATTPDGEITPRH 67 Query: 65 VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET 124 LA E IHTA+L+HDDV+D + +RRG ++ N+ +VL GD+L QA + Sbjct: 68 WRLAEITEMIHTASLVHDDVIDAADVRRGIDTVNTLFDNRIAVLAGDYLFGQAAWYLANL 127 Query: 125 KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIA 184 + E ++ LS V L EGE+RQ + DV+ EDYL KTA L S + + + L++ Sbjct: 128 DNLEVVKLLSKVIMDLPEGEVRQSLTRFDPDVSMEDYLAKSFYKTASLMSGSSKAAGLLS 187 Query: 185 GVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQR 244 GV V L +G +LGIAFQ+VDD+LD+ +GK +G D G T PV+ A + Sbjct: 188 GVSEEVADRLFDFGRDLGIAFQIVDDLLDFTASAETLGKPVGSDLIQGNLTAPVLFALEE 247 Query: 245 GTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + + + N ++LK+A + ++ + + A Y Q+A ++L LPDS Sbjct: 248 FPQMRELILRELSN-----PQDLKQALEWVYQSEGIPRSRQLARDYAQRAAEALYSLPDS 302 Query: 305 SWKKSLMEVVDFCLQRLN 322 + +++L ++VD+ L+RL+ Sbjct: 303 AARRALFQMVDYVLERLH 320 >gi|298373963|ref|ZP_06983921.1| polyprenyl synthetase [Bacteroides sp. 3_1_19] gi|298268331|gb|EFI09986.1| polyprenyl synthetase [Bacteroides sp. 3_1_19] Length = 324 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 104/319 (32%), Positives = 168/319 (52%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + +E+ + E+ N + S+ + + ++ S GK +RP+L L TA + Sbjct: 5 RKIEEPVSAEFERFNKDFEASLRSETTRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVT 64 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A Sbjct: 65 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 124 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 I+T + +S + L+EGE++QL ++ + E YL VIK KTA L SA E+ + Sbjct: 125 IQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGA 184 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G V + +G LG FQ+ DD+ DY + +GK G D R GK TLP++ A Sbjct: 185 ISSGASAEVIALCREFGEYLGYCFQIKDDIFDYF-KEANIGKPTGNDIREGKVTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++G + E + I + EN+ + N + E R Y KA D L L Sbjct: 244 LRQGREEEAARYLDMILRKDFAAENVDSLIEFAKANGGIEYAEARMKEYHDKAVDVLLRL 303 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S + SL+++ D+ + R Sbjct: 304 PESEARTSLIQLADYIMTR 322 >gi|197104247|ref|YP_002129624.1| polyprenyl synthetase family protein [Phenylobacterium zucineum HLK1] gi|196477667|gb|ACG77195.1| polyprenyl synthetase family protein [Phenylobacterium zucineum HLK1] Length = 335 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 143/320 (44%), Positives = 207/320 (64%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + L L DM V+ LI + + S V +IP + +LI KRLRP+LT+A A + R Sbjct: 14 IDALMALAGPDMAAVDALIREHMDSPVPVIPALADHLIAGSAKRLRPLLTIAAARLAGAR 73 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 D+ + LA A+EFIHTATLLHDDVVD S LRRG+VAA L+WG +SVLVGDFL ++AF + Sbjct: 74 DDSCLKLAAAVEFIHTATLLHDDVVDSSQLRRGRVAAHLIWGAPSSVLVGDFLFARAFEL 133 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ S ALE L+ + ++EGE+ QL+ S +LD+T+E Y+ +I +KTA LF+AA E Sbjct: 134 MVGAGSMAALEILARASRVISEGEVLQLTRSHDLDLTQEVYIEIIGAKTAELFAAAAEAG 193 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AG +AL+ +G +LG+AFQLVDD LDY G+ +GKN G+DFR GK TLP++ Sbjct: 194 AVAAGASPERCRALRRFGQDLGLAFQLVDDALDYSGDAKTLGKNAGDDFREGKVTLPLLY 253 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A R E++FW+ T++ + + + +A +M + RAL DT A Y AK +L Sbjct: 254 AMARTGAAERDFWQRTVDRREQTEADFDRARELMGQTRALDDTLALAARYADSAKAALAD 313 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P +SW+ +L ++ DF + R Sbjct: 314 FPSNSWRPALEDLADFSVAR 333 >gi|254253318|ref|ZP_04946636.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158] gi|124895927|gb|EAY69807.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158] gi|325528031|gb|EGD05253.1| polyprenyl synthetase [Burkholderia sp. TJI49] Length = 331 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 126/313 (40%), Positives = 176/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 19 IASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVL 78 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 79 AAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 138 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 139 RVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGAD 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTP 258 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 259 EQSALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAIAAFPDSIYK 316 Query: 308 KSLMEVVDFCLQR 320 +SL+ + + R Sbjct: 317 ESLLGLCSYSTSR 329 >gi|256820910|ref|YP_003142189.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271] gi|256582493|gb|ACU93628.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271] Length = 326 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 93/321 (28%), Positives = 168/321 (52%), Gaps = 5/321 (1%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYR 60 +++ ++ME + S V ++ + Y++ GK++RPM A M+ Sbjct: 6 QIKEPIREEMELFEQKFRSSMSSKVALLNRITYYIVNRKGKQMRPMFVFLVAKMVSGGKV 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + Sbjct: 66 SERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLLL 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 I+ + L +S+ ++EGEL Q+ ++ LD+ EE Y +I+ KTA L +A + Sbjct: 126 SIDNGDFDLLRIISVAVREMSEGELLQIEKARRLDIVEEVYYEIIRQKTATLIAACCAMG 185 Query: 181 SLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + + + ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+I Sbjct: 186 ACSVQPEQTELIEKMRLFGEYIGMAFQIKDDLFDYTEDA--IGKPTGIDIKEQKMTLPLI 243 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 ++ EK + +++ + +K+ ++ ++ L + + QKA + L Sbjct: 244 YVLNTCSEEEKQWLINSVKKYNKDKKRVKEVIEFVKNHKGLEYATTKMKEFQQKALNILD 303 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 P S +K++L +V++ + R Sbjct: 304 EFPTSPYKEALTLMVNYVIDR 324 >gi|171316229|ref|ZP_02905452.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5] gi|171098643|gb|EDT43440.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5] Length = 331 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 126/313 (40%), Positives = 176/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 19 ITSDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVL 78 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 79 AAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 138 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 139 RVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGAD 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTP 258 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 259 EQSALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAITAFPDSIYK 316 Query: 308 KSLMEVVDFCLQR 320 +SL+ + + R Sbjct: 317 ESLLGLCSYSTSR 329 >gi|311030284|ref|ZP_07708374.1| heptaprenyl diphosphate synthase component II [Bacillus sp. m3-13] Length = 320 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 94/320 (29%), Positives = 171/320 (53%), Gaps = 4/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +KM+ D++ + + I ++ ++ + +L+ +GGKR+RP+ L A + Y Sbjct: 3 LKMMYSFLNNDLQIIENELEATIQTERALLQEASLHLLQAGGKRIRPVFVLLAAKLGAYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 +A A+E +H A+L+HDDV+DD+ LRRGK + W N+ ++ GD++ +++ M Sbjct: 63 IHKVKNVAVALELMHMASLVHDDVIDDAELRRGKSTIKAKWDNRIAMYTGDYIFARSLEM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + + EA LS L +GE+ Q+ N D YL IK KTA+L + + ++ Sbjct: 123 MTKVEDIEAHRILSNTLVELCKGEIEQIRDKYNYDQNLRTYLRRIKRKTAILIAVSCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ +GV SV Q+L +G +G++FQ+ DD+LD+ ++GK G D G TLPV+ Sbjct: 183 AITSGVPASVHQSLYWFGYYVGMSFQITDDILDFTSTEEQLGKPAGSDLLQGNITLPVLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + EK TI++ S E +K+ +++ + A+ + + Y ++A L Sbjct: 243 AMESPPLNEK---IRTIHEHSNSGE-IKEIIELIKRSDAIDRSFALSDRYLERAFKELEK 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP+ K++ V + +R Sbjct: 299 LPNGLAKRTFNNVAKYIGKR 318 >gi|315224101|ref|ZP_07865941.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287] gi|314945834|gb|EFS97843.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287] Length = 326 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 93/321 (28%), Positives = 168/321 (52%), Gaps = 5/321 (1%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYR 60 +++ ++ME + S V ++ + Y++ GK++RPM A M+ Sbjct: 6 QIKEPIREEMELFEQKFRSSMSSKVALLNRITYYIVNRKGKQMRPMFVFLVAKMVSGGKV 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + Sbjct: 66 SERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLLL 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 I+ + L +S+ ++EGEL Q+ ++ LD+ EE Y +I+ KTA L +A + Sbjct: 126 SIDNGDFDLLRIISVAVREMSEGELLQIEKARRLDIVEEVYYEIIRQKTATLIAACCAMG 185 Query: 181 SLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + + + + ++ +G +G+AFQ+ DD+ DY + +GK G D + K TLP+I Sbjct: 186 ACSVQPEQTELIEKMRLFGEYIGMAFQIKDDLFDYTEDA--IGKPTGIDIKEQKMTLPLI 243 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 ++ EK + +++ + +K+ ++ ++ L + + QKA + L Sbjct: 244 YVLNTCSEEEKQWLINSVKKYNKDKKRVKEVIEFVKNHKGLEYATTKMKEFQQKALNILD 303 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 P S +K++L +V++ + R Sbjct: 304 EFPVSPYKEALTLMVNYVIDR 324 >gi|115350537|ref|YP_772376.1| trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD] gi|170699961|ref|ZP_02890988.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10] gi|172059569|ref|YP_001807221.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6] gi|115280525|gb|ABI86042.1| Trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD] gi|170135109|gb|EDT03410.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10] gi|171992086|gb|ACB63005.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6] Length = 331 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 126/313 (40%), Positives = 176/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 19 ITSDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVL 78 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 79 AAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 138 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 139 RVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGAD 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTP 258 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 259 EQSALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAITAFPDSIYK 316 Query: 308 KSLMEVVDFCLQR 320 +SL+ + + R Sbjct: 317 ESLLALCSYSTSR 329 >gi|134280083|ref|ZP_01766794.1| polyprenyl synthetase [Burkholderia pseudomallei 305] gi|134248090|gb|EBA48173.1| polyprenyl synthetase [Burkholderia pseudomallei 305] Length = 309 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 126/309 (40%), Positives = 176/309 (56%), Gaps = 2/309 (0%) Query: 12 MEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 ME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L + +LA + Sbjct: 1 MEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGENTNQKHVLAAVV 60 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALE 131 EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ +E Sbjct: 61 EFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGVGKMRVME 120 Query: 132 ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVR 191 LS ++EGE+ QL + DV E Y+ VI+ KTA LF AA + +++AG Sbjct: 121 ILSEATTIISEGEVLQLLNMHDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTE 180 Query: 192 QALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKN 251 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT + Sbjct: 181 AAAAEYGRRIGTAFQIMDDWLDYAGTAESMGKNAGDDLREGKPTLPLIYLIERGTPEQST 240 Query: 252 FWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLM 311 + I G + F + + AL T A Q A ++ P S +K+SL+ Sbjct: 241 LAREAIEHG--GTDRFDTIFDAITRSGALDHTLECARQEAQAAAAAISSFPSSIFKESLL 298 Query: 312 EVVDFCLQR 320 E+ + R Sbjct: 299 ELCSYSTSR 307 >gi|206561780|ref|YP_002232545.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315] gi|198037822|emb|CAR53766.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315] Length = 331 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 126/313 (40%), Positives = 176/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 19 ITSDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVL 78 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 79 AAVVEFIHTATLLHDDVVDESELRRGRQTANALFGNAASVLVGDYLYSRSFEMMVGVGKM 138 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 139 RVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGAD 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 APTEAAAAEYGRRVGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTP 258 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A Q A ++ PDS +K Sbjct: 259 EQSALAREAIEQG--GTDRFDTIFEAITRSGALDHTLECARQEAQAAAAAIAAFPDSIYK 316 Query: 308 KSLMEVVDFCLQR 320 +SL+ + + R Sbjct: 317 ESLLGLCSYSTSR 329 >gi|83648584|ref|YP_437019.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC 2396] gi|83636627|gb|ABC32594.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC 2396] Length = 322 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 128/320 (40%), Positives = 191/320 (59%), Gaps = 2/320 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + +D V+ LI ++ S+V ++ + +Y+I SGGKRLRP+L L + L Sbjct: 4 ETIYAAVNEDFLSVDGLIKNQLFSNVPLVEKIGQYIIDSGGKRLRPLLVLLVSNALNATE 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 +++ LA IEF+HTATLLHDDVVD S LRRG+ A WGN SVLVGDFL S+AF M+ Sbjct: 64 KHYLKLAAIIEFLHTATLLHDDVVDTSDLRRGRDTANAKWGNAPSVLVGDFLYSRAFQMM 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E + + + L+ +AEGE+ QL+ KN D+TE Y+ VI +KTA+LF AA ++ Sbjct: 124 VELRDMDVMSVLANATNVIAEGEVLQLTNCKNPDITEAQYMEVITAKTAMLFEAASHSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++ +K +G+ LGIAFQL+DDVLDY+G EMGKN+G+D GKPTLP++ A Sbjct: 184 ILCQASAETTSDMKEFGLELGIAFQLIDDVLDYQGNAAEMGKNVGDDLAEGKPTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 Q+G + ++ + I +G + E L +R++ AL T A Y +A L L Sbjct: 244 QQQGDEAQRKLIRKAIREGGL--EQLDAVMSAVRKSGALNYTIELAKEYATRAAARLERL 301 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 S ++ +L + + + R Sbjct: 302 APSVYRDALFALTEIAVNRT 321 >gi|161525972|ref|YP_001580984.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616] gi|189349309|ref|YP_001944937.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC 17616] gi|221213256|ref|ZP_03586231.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD1] gi|160343401|gb|ABX16487.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616] gi|189333331|dbj|BAG42401.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC 17616] gi|221166708|gb|EED99179.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD1] Length = 331 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 125/313 (39%), Positives = 176/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 19 IASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVL 78 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 79 AAVVEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDYLYSRSFEMMVGVGKM 138 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +E LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 139 RVMEILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGAD 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTP 258 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A A ++ PDS++K Sbjct: 259 EQAALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEALAAAAAITAFPDSTYK 316 Query: 308 KSLMEVVDFCLQR 320 +SL+ + + R Sbjct: 317 ESLLALCSYSTSR 329 >gi|254173046|ref|ZP_04879720.1| bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sp. AM4] gi|214033202|gb|EEB74030.1| bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sp. AM4] Length = 343 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 93/326 (28%), Positives = 164/326 (50%), Gaps = 18/326 (5%) Query: 13 EKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAI 71 + V+ +IL+ + D + + + ++ +GGKR+RP + L A + + + A A+ Sbjct: 16 KDVDKIILELVPEKDPKKLYEAARHYPLAGGKRVRPFVVLRAAEAVGGDPEKALYPAAAV 75 Query: 72 EFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-----KS 126 EFIH +L+HDD++D LRRG+ VWG ++L GD L S+AF + + K Sbjct: 76 EFIHNYSLVHDDIMDMDELRRGRPTVHKVWGVNMAILAGDLLFSKAFEAIAKAEVSPEKK 135 Query: 127 QEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGV 186 LE L + L EG+ + +VT ++YL +I KT LF + + +++ Sbjct: 136 ARILEVLVKTSNELCEGQALDIEFETKDEVTVDEYLKMISGKTGALFDGSATIGAIVGTD 195 Query: 187 QNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246 +AL +G N+GIAFQ+ DDVLD + ++GK +G D R GK TL V FQ + Sbjct: 196 NEEYIRALSKWGRNVGIAFQIWDDVLDLIADEEKLGKPVGSDIRKGKKTLIVSHFFQHAS 255 Query: 247 KREKNFWKSTIND------------GKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 + +K + + E + KA ++++ ++ A + ++A Sbjct: 256 EEDKAEFLKVFGKYAGDAKGDALIHDEKVKEEVAKAIELLKKYGSIDYAANYAKNLVKEA 315 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQR 320 ++L+ LP+S +K L + +F ++R Sbjct: 316 NEALKILPESEARKDLELLAEFLVER 341 >gi|255013149|ref|ZP_05285275.1| polyprenyl synthetase [Bacteroides sp. 2_1_7] Length = 345 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 104/319 (32%), Positives = 168/319 (52%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + +E+ + E+ N + S+ + + ++ S GK +RP+L L TA + Sbjct: 26 RKIEEPVSAEFERFNKDFEASLRSETTRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVT 85 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A Sbjct: 86 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 145 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 I+T + +S + L+EGE++QL ++ + E YL VIK KTA L SA E+ + Sbjct: 146 IQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGA 205 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G V + +G LG FQ+ DD+ DY + +GK G D R GK TLP++ A Sbjct: 206 ISSGASAEVIALCREFGEYLGYCFQIKDDIFDYF-KEANIGKPTGNDIREGKVTLPLLYA 264 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++G + E + I + EN+ + N + E R Y KA D L L Sbjct: 265 LRQGREEEAARYLDMILRKDFAAENVDSLIEFAKANGGIEYAEARMKEYHDKAVDVLLRL 324 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S + SL+++ D+ + R Sbjct: 325 PESGARTSLIQLADYIMTR 343 >gi|15897028|ref|NP_341633.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus solfataricus P2] gi|284173372|ref|ZP_06387341.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus solfataricus 98/2] gi|14423727|sp|P95999|GGPS_SULSO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase gi|13813193|gb|AAK40423.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus solfataricus P2] gi|261601682|gb|ACX91285.1| Dimethylallyltranstransferase [Sulfolobus solfataricus 98/2] Length = 332 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 105/315 (33%), Positives = 174/315 (55%), Gaps = 10/315 (3%) Query: 15 VNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFI 74 VNF I + S+ + + + +L +GGKRLRP++ ++++ ++ + A A+E + Sbjct: 17 VNFRIKNFVKSNFKTLEEASFHLFTAGGKRLRPLVLVSSSDLIGGDRERAYKAAAAVEIL 76 Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIET-------KSQ 127 H TL+HDD++D+ LRRG + WG ++L GD+L ++AF + E Sbjct: 77 HNFTLVHDDIMDNDGLRRGLPTVHVKWGEPMAILAGDYLHAKAFEALNEALKGLDGNTFY 136 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +A ++EG+ +S LDVTEE+Y+ +IK KTA+LFS + + +I Sbjct: 137 KAFSIFITSIEIISEGQAMDMSFENRLDVTEEEYIQMIKGKTAMLFSCSAALGGIINKAN 196 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 + V + L YG+NLGI+FQ+VDD+L G+ E+GK I D R GK T+ VI T+ Sbjct: 197 DDVVKKLTEYGLNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTILVIKTLSEATE 256 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS--S 305 EK ST+ + + E+L++A I+R++ +L A Y A ++LR +P S + Sbjct: 257 DEKKILVSTLGNKEAKKEDLERASEIIRKH-SLQYAYDLAKKYSDLAIENLREIPVSNKT 315 Query: 306 WKKSLMEVVDFCLQR 320 +K+L + F +QR Sbjct: 316 AEKALKYLAQFTIQR 330 >gi|221202398|ref|ZP_03575430.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD2M] gi|221208142|ref|ZP_03581147.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD2] gi|221172045|gb|EEE04487.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD2] gi|221177675|gb|EEE10090.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD2M] Length = 331 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 124/313 (39%), Positives = 176/313 (56%), Gaps = 2/313 (0%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 DME+VN +I + + SDV +I + +Y+I +GGKRLRP L L A L +L Sbjct: 19 IASDMEQVNRVIRQSLASDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGETSHQRHVL 78 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +EFIHTATLLHDDVVD+S LRRG+ A ++GN SVLVGD+L S++F M++ Sbjct: 79 AAVVEFIHTATLLHDDVVDESELRRGRETANALFGNAASVLVGDYLYSRSFEMMVGVGKM 138 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 ++ LS ++EGE+ QL + DV E Y+ VI+ KTA LF A+ + +++AG Sbjct: 139 RVMDILSEATTIISEGEVLQLLNMHDADVDETRYMQVIRYKTAKLFEASARLGAVLAGAD 198 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 A YG +G AFQ++DD LDY G MGKN G+D R GKPTLP+I +RGT Sbjct: 199 APTEAAAAEYGRRIGTAFQIMDDWLDYAGTAEAMGKNAGDDLREGKPTLPLIYLIERGTP 258 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 + + I G + F + + AL T A A ++ PDS++K Sbjct: 259 EQAALAREAIEQG--GTDRFDTIFDAITRSGALDHTLECARQEALAAAAAITAFPDSTYK 316 Query: 308 KSLMEVVDFCLQR 320 +SL+ + + R Sbjct: 317 ESLLALCSYSTSR 329 >gi|18977474|ref|NP_578831.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638] gi|18893173|gb|AAL81226.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638] Length = 340 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 99/338 (29%), Positives = 166/338 (49%), Gaps = 20/338 (5%) Query: 3 MLEDLTLKDMEK---VNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 M ++L K EK V+ +L I + +++ + ++ +GGKR+RP + L + Sbjct: 1 MYDELFKKIKEKAKFVDEKLLSLIPEKEPKILYEAARHYPLAGGKRVRPFVVLTATEAVG 60 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 + + A AIE IH +L+HDD++D RRG+ VWG ++L GD L S+AF Sbjct: 61 GEWEKAIYPAVAIELIHNYSLVHDDIMDMDETRRGRPTVHKVWGINMAILAGDLLFSKAF 120 Query: 119 CMVIET-----KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173 + K LE + + L EG+ L K VT E+Y+ +I KT LF Sbjct: 121 EAISRAEIPPEKKARVLETVVKASNELCEGQAMDLEFEKRDTVTIEEYMRMISGKTGALF 180 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 A+ +V ++ AL ++G N+GIAFQ+ DDVLD + ++GK +G D R GK Sbjct: 181 DASAKVGGIVGTDNEEYINALSTWGRNVGIAFQIWDDVLDLIADEEKLGKPVGSDIRKGK 240 Query: 234 PTLPVILAFQRGTKREKNFWKSTIND-------GKISVENLK----KAFIIMRENRALVD 282 TL V F+ +++K + I E++K +A ++++ ++ Sbjct: 241 KTLIVAHFFENADEKDKQKFLKVFGKYAGDVKGEGIIEEDIKAEVMEAIDLLKKYGSIDY 300 Query: 283 TEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A +KA ++L+ LP+S +K L + F ++R Sbjct: 301 AANIAREMVKKANEALKVLPESEARKDLELLARFIVER 338 >gi|93006580|ref|YP_581017.1| trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5] gi|92394258|gb|ABE75533.1| Trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5] Length = 344 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 115/320 (35%), Positives = 189/320 (59%), Gaps = 3/320 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGD 62 ++ + D + ++ + + S V+++ +V +++I +GGKR+RP++TL A ML + Sbjct: 25 IQSIVADDFDIMDKQVFGSLNSKVKLVMNVSQHVINAGGKRMRPLITLLCARMLNDEPSK 84 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + LA E +HTATL+HDDV+D+S RRGK A W N T+VLVGD+L+++AF +++ Sbjct: 85 QAMHLAAITEMLHTATLVHDDVIDESGQRRGKPTANATWDNATAVLVGDYLIARAFNLLV 144 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 +S L+ S C +AEGE+ QL N + TE+DYL++I KT+ LF A + +++ Sbjct: 145 GFQSLPLLQVFSDGTCDIAEGEVLQLQHQHNPEATEQDYLNIIDGKTSRLFMMATQGAAI 204 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 + G Q QAL ++G + G AFQ+VDDVLDY G+ MGKN+G+D GKPTLP I A Sbjct: 205 LQG-QTQHLQALANFGQHFGNAFQIVDDVLDYSGDSALMGKNLGDDLAEGKPTLPTIKAL 263 Query: 243 QRGTKREKNFWKST-INDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + K ++ I N ++ ++R + +L + RA + A+ +L L Sbjct: 264 ELLKDSNKEGYEQLRIAVQTGKTPNAEQLIALVRHSGSLDYCKQRALEETKLAQQALSSL 323 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 PD+ +++ L ++ + RL Sbjct: 324 PDNRYRQGLYQLTELASARL 343 >gi|326318388|ref|YP_004236060.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375224|gb|ADX47493.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 326 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 131/318 (41%), Positives = 195/318 (61%), Gaps = 2/318 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 + L +DM +V+ +I R+ S V +I ++ +Y+I +GGKRLRP L L + L Y+G Sbjct: 9 AILALIAEDMHEVDKVIGLRLQSSVPLIGEIARYIISAGGKRLRPALLLLMSGALGYQGA 68 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 LA IEFIHTATLLHDDVVD+S +RRG+ A +GN SVLVGDFL S+AF M++ Sbjct: 69 QRFNLAAVIEFIHTATLLHDDVVDESTMRRGRPTANENFGNPASVLVGDFLHSRAFQMMV 128 Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182 + ++ LS +AEGE++QL + + + E+ YL VI+SKTA LF A+ ++++ Sbjct: 129 DADDMRVMQILSEATNIIAEGEVQQLMNTHDATLDEQGYLEVIRSKTAKLFEASARLAAV 188 Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242 +A + +A YG LG AFQ++DDVLDY G EMGKN+G+D R GK TLP+I+A Sbjct: 189 LARAPAPIEEACAEYGKALGTAFQVIDDVLDYDGNSAEMGKNLGDDLREGKVTLPLIIAM 248 Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302 QRG ++ ++ I G S++ L I+++ AL T A + Q+A +L LP Sbjct: 249 QRGDAAQRQLIETAIQQG--SLDELPAILAIVKQTGALEATRAAAAAQAQEAIRALSALP 306 Query: 303 DSSWKKSLMEVVDFCLQR 320 + + + L+++ L R Sbjct: 307 SNKYTEGLLQLASQLLDR 324 >gi|157692773|ref|YP_001487235.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus SAFR-032] gi|157681531|gb|ABV62675.1| possible heptaprenyl diphosphate synthase component II [Bacillus pumilus SAFR-032] Length = 320 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 89/320 (27%), Positives = 166/320 (51%), Gaps = 4/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + D++ + + + + SD ++ + +L+ +GGKR+RP+ L + + +Y Sbjct: 3 LKAMISFLNHDIDIIEKELEQTVRSDYALLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++ +++ Sbjct: 63 INKIKYVAVALELIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMFARSLEY 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + A E LS + L GE+ Q+ N+D YL IK KTA+L + + ++ Sbjct: 123 MTKINHPMAHEILSKMVVELCLGEIEQVKDKYNMDQNLRTYLRRIKRKTALLIAGSCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AG +AL +G +G+++Q++DDVLD+ E+GK +G D G TLPV+ Sbjct: 183 AIAAGTDEKTHKALYWFGYYVGMSYQIIDDVLDFTSTEEELGKPVGGDLLQGNVTLPVLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T + + + + LK +++ A+ + + Y +KA + L Sbjct: 243 ALKNPTLEGQLKLI----NSETTEMQLKPVIEHLKQTDAIDRSIRVSEMYLKKAFEQLDK 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + SL + + +R Sbjct: 299 LPRGRARTSLASIAKYIGKR 318 >gi|113474063|ref|YP_720124.1| trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101] gi|110165111|gb|ABG49651.1| Trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101] Length = 323 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 92/323 (28%), Positives = 169/323 (52%), Gaps = 8/323 (2%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATAL---MLEY 59 +L D++ + + + + + ++ ++L GKR+RP + L + + + Sbjct: 6 LLFSPVEADLQLLTNNLKQLVGARHPILYAAAEHLFRVKGKRIRPAIVLLISRTTMLTQE 65 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 H LA E IHTA+L+HDD+VD+S +RRG ++ N+ +VL GDFL +Q+ Sbjct: 66 ITPKHRRLAEITEMIHTASLVHDDIVDESEIRRGVPTVHSLFTNRIAVLAGDFLFAQSSW 125 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + E ++ LS V LAEGE++Q N D++ E YL KT+ L + + + Sbjct: 126 YLANLDNLEVVKLLSKVIMDLAEGEIQQGLHRFNTDLSIEAYLEKSYYKTSSLIANSSKA 185 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 +++I+ V + Q + YG +G+AFQ+VDD+LD+ +GK D ++G T P + Sbjct: 186 AAIISDVPPEIVQDMYYYGRYIGLAFQIVDDILDFTSATESLGKPACSDLKSGNLTAPTL 245 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A + EK + D +L++A +++ +R + ++ A Y + A + L+ Sbjct: 246 YALEEKPALEKLLERELAQD-----SDLEEAIQLIKNSRGIKRSQELATKYAKMAVEHLQ 300 Query: 300 CLPDSSWKKSLMEVVDFCLQRLN 322 LPD +++L+ + D+ L RL+ Sbjct: 301 SLPDCDSRQALINLTDYVLSRLS 323 >gi|206890930|ref|YP_002249297.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742868|gb|ACI21925.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 322 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 117/319 (36%), Positives = 189/319 (59%), Gaps = 2/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + ++ +V ++ SD +IP + Y+I SGGKRLRP+ L +A + YR Sbjct: 4 QDIFKTYEAELREVEKELINIFKSDATLIPTIGAYIINSGGKRLRPLFLLISADLAGYRE 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 V++A IE +HTA+LLHDDVVD++ LRRG+V+A +WGNQ +VL+GD+L ++A + Sbjct: 64 YKRVIMAAVIEALHTASLLHDDVVDEAELRRGQVSANRIWGNQVTVLLGDYLYAKALHVS 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + +S + +EALS +AEGE+ QL + + +T +Y+ +I KTA L AA ++ Sbjct: 124 VAQESLQIMEALSWATSQMAEGEILQLMKAGDPTITFNEYIKIITGKTAGLIRAACRIAG 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 ++A + QAL +G N+G+AFQ++DD+LDY + +E+GK +G+D GK TLP+I Sbjct: 184 ILAKLSEEKIQALTDFGHNIGVAFQMIDDILDYVADESELGKKLGKDLMEGKITLPLIEL 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++ +E+ +TI S ENL K +R+ + + +Y KAK +L Sbjct: 244 IKKTQGKEE--IINTIKSDGFSEENLLKILNYLRQYNCIESSMEIVKNYVDKAKKALEIF 301 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS ++ L + D+ L R Sbjct: 302 PDSDARQRLFRIADYILLR 320 >gi|147677304|ref|YP_001211519.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] gi|146273401|dbj|BAF59150.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] Length = 321 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 107/321 (33%), Positives = 175/321 (54%), Gaps = 3/321 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L D D++ V + + + ++ + +L+ +GGKRLRP L L A Y Sbjct: 1 MLELFDEIKGDLQVVEEELRAVVQTQNPLLTETSTHLLNAGGKRLRPALCLFGAKFYNYN 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + + LA A+E IH ATL+HDDVVD S RRG + WGN S VG +L +++ + Sbjct: 61 LEKVLPLAVALELIHMATLVHDDVVDASMTRRGIPTVKAKWGNSISTHVGTYLFAKSLIL 120 Query: 121 VIET-KSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEV 179 + + K+ LS ++ + EGE++Q+S S N+ + ++YLH IK KTA+L +A++++ Sbjct: 121 LSKYEKTPIIARVLSSISVKMCEGEIQQISSSFNICQSIKEYLHRIKLKTALLIAASIQL 180 Query: 180 SSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVI 239 + G S+ L+ YG N+G+AFQ+ DD+LD E +++GK +G D R G T+PVI Sbjct: 181 GAAACGAPVSIHLPLRRYGHNIGMAFQITDDILDMVAEESQLGKPVGSDLRQGIVTIPVI 240 Query: 240 LAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLR 299 A +++ I + + E +++A I++ A+ + A Y KAK+ L+ Sbjct: 241 YALTCC--QQRKRLVELIGKVEKTEEEIREAIKIIKSCGAIEYSFNLARKYLLKAKEELK 298 Query: 300 CLPDSSWKKSLMEVVDFCLQR 320 LPD + +L DF R Sbjct: 299 SLPDIPTRFTLSLAADFIGVR 319 >gi|323701812|ref|ZP_08113482.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] gi|323533116|gb|EGB22985.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] Length = 320 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 103/320 (32%), Positives = 173/320 (54%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 M L +D+ V I K + S ++ L+ +GGKRLRP L + + Sbjct: 1 MLDFFSLIREDLGMVESEIRKVVQSRDSLLTKTSLQLLNAGGKRLRPAFALLAGRLYDAD 60 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + + LA A+E IH ATL+HDDVVDDS RRG + WGN+ S+ GD+L +++ + Sbjct: 61 VEKLIPLAVALELIHMATLVHDDVVDDSMTRRGTPTVKANWGNKISMHTGDYLFAKSLVL 120 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + K E L+ + + EGE+ Q+S + + + + DY + I+ KTA+L +A+ ++ Sbjct: 121 ISTYKEPLIAELLAKTSVKMCEGEIHQISTAYSANQSWRDYFYRIERKTALLIAASCQLG 180 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ AG + L +G LG+AFQ+ DD+LD + E+GK IG D R G T+PVI Sbjct: 181 AVAAGAPAKDHKRLGKFGHQLGMAFQITDDILDMVADQRELGKPIGGDLRQGILTMPVIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + ++ +RE+ + + + + + +K+A +++E + + A Y KAK++L+ Sbjct: 241 SLEKSPRRER--LRELVEIREKTEDQVKEAIELIKEAGGIQFSFEVAQRYIAKAKNNLKY 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD KK ++ DF R Sbjct: 299 LPDRPVKKVFEQIADFIGVR 318 >gi|320106552|ref|YP_004182142.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4] gi|319925073|gb|ADV82148.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4] Length = 329 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 114/319 (35%), Positives = 180/319 (56%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 K + DL D+ V ++ S+V +I ++ +YL+ GGKR+RP+L L +A L +RG Sbjct: 10 KGVFDLLRDDLAAVEREFARQSSSEVRVITEIAEYLLAGGGKRIRPLLLLLSAKALHFRG 69 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 ++ + L +E +HTATL+HDD++D + RRG+ ++ WGN VL GD+L Q+F + Sbjct: 70 ESRIRLGAVVEMLHTATLVHDDIIDAADTRRGRPSSNTAWGNSKCVLAGDWLYMQSFQVA 129 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 +E ++ L+ L + + EGEL Q+ L + EE+Y +I KTA LF ++++ + Sbjct: 130 MEERNFHVLDLLISLTQQMVEGELLQIQKLGRL-INEEEYFDLIFRKTASLFRVSMQLGA 188 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 IA + L YG NLG+AFQ+VDDVLD E + +GK + D R GK TL VI A Sbjct: 189 AIADAPKEIEGQLGEYGRNLGLAFQIVDDVLDLTSEESTLGKPVASDLREGKATLAVIHA 248 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 +RGT E+ ++ + D + K I++ + +L A +Y + A+ L L Sbjct: 249 LERGTGEEREAIRTVLADRSFNRVPHKTILAILKHHGSLDYAMDAARAYAEVARQCLTDL 308 Query: 302 PDSSWKKSLMEVVDFCLQR 320 PDS K++L+ V F R Sbjct: 309 PDSEAKRALLWVPGFVTSR 327 >gi|146299544|ref|YP_001194135.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101] gi|146153962|gb|ABQ04816.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101] Length = 325 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 98/320 (30%), Positives = 169/320 (52%), Gaps = 4/320 (1%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYR 60 ++ + +ME + + S V ++ + Y++ GK++RPM TA M+ Sbjct: 6 QIKQPIIAEMELFEKKFHESMTSKVALLNRITYYIVNRKGKQMRPMFVFLTAKMVSGGTV 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + A IE IHTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + Sbjct: 66 NERTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLL 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 I+ + L +S+ ++EGEL Q+ ++ LD+TE+ Y +I+ KTA L +A + Sbjct: 126 SIDNGDFDLLRIISVAVREMSEGELLQIEKARRLDITEDVYYEIIRKKTATLIAACCALG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + + + ++ +G +G+AFQ+ DD+ DY +GK G D + K TLP+I Sbjct: 186 AKAVIEDDVQVENMRMFGELIGMAFQIKDDLFDY--SEEAIGKPTGIDIKEQKMTLPLIH 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 T +EK + ++I + + +K+ ++ N L E + + Q+A L Sbjct: 244 VLNTCTPQEKKWLINSIKNHNKDKKRVKEVIAFVKNNNGLAYAEEKMVQFQQEALSLLEN 303 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PDS +K +L +V++ ++R Sbjct: 304 YPDSEFKAALTLMVNYVIER 323 >gi|262383148|ref|ZP_06076285.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B] gi|301311752|ref|ZP_07217677.1| polyprenyl synthetase [Bacteroides sp. 20_3] gi|262296026|gb|EEY83957.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B] gi|300830312|gb|EFK60957.1| polyprenyl synthetase [Bacteroides sp. 20_3] Length = 324 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 104/319 (32%), Positives = 168/319 (52%), Gaps = 1/319 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + +E+ + E+ N + S+ + + ++ S GK +RP+L L TA + Sbjct: 5 RKIEEPVSAEFERFNKDFEASLRSETTRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVT 64 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 DN + A +E +HTATL+HDDV+D++ RRG + ++ N+ SVLVGD++LS A Sbjct: 65 DNTINSAVLLELLHTATLIHDDVIDETKQRRGVPSLNAIFDNRISVLVGDYVLSTALIRS 124 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 I+T + +S + L+EGE++QL ++ + E YL VIK KTA L SA E+ + Sbjct: 125 IQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGA 184 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + +G V + +G LG FQ+ DD+ DY + +GK G D R GK TLP++ A Sbjct: 185 ISSGASAEVIALCREFGEYLGYCFQIKDDIFDYF-KEANIGKPTGNDIREGKVTLPLLYA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++G + E + I + EN+ + N + E R Y KA D L L Sbjct: 244 LRQGREEEAARYLDMILRKDFAAENVDSLIEFAKANGGIEYAEARMKEYHDKAVDVLLRL 303 Query: 302 PDSSWKKSLMEVVDFCLQR 320 P+S + SL+++ D+ + R Sbjct: 304 PESGARTSLIQLADYIMTR 322 >gi|332664666|ref|YP_004447454.1| trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM 1100] gi|332333480|gb|AEE50581.1| Trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM 1100] Length = 322 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 96/320 (30%), Positives = 166/320 (51%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + ++ +++ K + + S V ++ + Y++ GK++RPM A + Sbjct: 3 LDTIKKPIDQELIKFEQHFKQSMRSSVPLLDKITYYIVRRKGKQVRPMFVFLAAQVCGGV 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + + A IE +HTATL+HDDVVDDS RRG + +W N+ +VLVGDFLLSQ + Sbjct: 63 VEATYVAASLIELLHTATLVHDDVVDDSMERRGFFSVNALWKNKIAVLVGDFLLSQGLLL 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + K LE +S ++EGEL Q+ ++ LD+ EE Y +I+ KTA L S+A + Sbjct: 123 AVRNKQFRILEIVSDAVKAMSEGELLQIEKARRLDIKEEVYYEIIRQKTASLISSACQAG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + A + ++ +G +G+AFQ+ DD+ D+ +++GK +G D + K TLP+I Sbjct: 183 AASATTDEDAIERMRLFGEKIGLAFQIKDDLFDF--GTDDVGKPLGIDIKEKKMTLPLIY 240 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + + E +K+ +R + + TE + Q+A D L Sbjct: 241 ALNKSDSATRRHIIGLVRRHNENPEKVKEVIDFVRNSGGIQYTEAVMLRFRQEAFDILET 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P+S + +L ++V F +R Sbjct: 301 FPESESRTALRDLVTFVTER 320 >gi|22299300|ref|NP_682547.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1] gi|22295483|dbj|BAC09309.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1] Length = 323 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 98/321 (30%), Positives = 164/321 (51%), Gaps = 8/321 (2%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML---EYR 60 L D+ + + I + ++ ++L + GKR+RP + + + Sbjct: 7 LFSPVEADLCVLTENLKALIGAQHAVLSAAAEHLFAASGKRIRPAIVFLVSRATLPDQGI 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 H LA E IHTA+L HDDVVD + LRRG V+GN+ ++ GDFL +QA Sbjct: 67 TPRHCRLAEITEMIHTASLFHDDVVDQAQLRRGVPTVNSVFGNRVAIQAGDFLFAQASWY 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + + + ++ LS V AEGE+RQ + +T +DYL KTA L + + + + Sbjct: 127 LADLDNLQVVKLLSQVIKDFAEGEIRQGFNRFDTSITLDDYLLKTYYKTASLIANSAKAA 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++++ +A+ +YG NLG+AFQ+VDD+LD+ E+GK G D R+G T PV+ Sbjct: 187 AVLSEAPPETIEAMYTYGKNLGLAFQIVDDILDFTRSTAELGKPAGSDLRDGNLTAPVLF 246 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + + + I +L+ A ++R++ A+ D A Y Q A +L Sbjct: 247 ALPKAP-----YLHTLIEREFSEEGDLETALNLVRQSGAIEDARNLAKEYAQAALPALEV 301 Query: 301 LPDSSWKKSLMEVVDFCLQRL 321 LP S +++L ++ D+ L+RL Sbjct: 302 LPPSEPRQALSQLTDYVLERL 322 >gi|305664558|ref|YP_003860845.1| polyprenyl synthetase [Maribacter sp. HTCC2170] gi|88708575|gb|EAR00811.1| polyprenyl synthetase [Maribacter sp. HTCC2170] Length = 325 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 93/320 (29%), Positives = 169/320 (52%), Gaps = 4/320 (1%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML--EYR 60 ++D ++ME + + S V ++ + Y++ GK++RPM TA +L Sbjct: 6 QIKDPVNQEMELFETKFRESMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKLLNNGEV 65 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + A IE IHTA+L+HDDVVD+S RRG + +W N+ +VLVGD+L S+ + Sbjct: 66 NERTYRGASIIELIHTASLVHDDVVDESNKRRGFFSINALWKNKIAVLVGDYLFSKGLLL 125 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + L +S+ ++EGEL Q+ ++ LD+ EE Y +I+ KTA L +A + Sbjct: 126 SLDNGDFDLLRIISVAVREMSEGELLQIEKARRLDIDEEIYYDIIRQKTATLIAACCSMG 185 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + ++ + + +G G+AFQ+ DD+ DY ++GK G D + K TLP+I Sbjct: 186 ACSVKPESEEVETFRKFGEFCGMAFQIKDDLFDY--GEQKIGKPTGIDIKEQKMTLPLIH 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 +K EK + +++ + + +K+ +++ L E + + + ++A D L Sbjct: 244 VLNICSKSEKKWLINSVKNHNRDKKRVKEVIAFVKDKGGLTYAESKMHEFKKQALDLLLS 303 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 P S+++ SL +VD+ + R Sbjct: 304 YPKSAYRDSLELMVDYVVDR 323 >gi|262190890|ref|ZP_06049107.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae CT 5369-93] gi|262033217|gb|EEY51738.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae CT 5369-93] Length = 274 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 112/273 (41%), Positives = 161/273 (58%), Gaps = 1/273 (0%) Query: 48 MLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSV 107 ML + +A L Y+G +H A IEFIHTATLLHDDVVD+S LRRGK A +GN SV Sbjct: 1 MLAVLSAKALGYQGAHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASV 60 Query: 108 LVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKS 167 LVGDF+ +++F M+ E S + L+ +S +AEGE++QL + D TE Y+ VI S Sbjct: 61 LVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYS 120 Query: 168 KTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227 KTA LF AA ++ +++ V A+++YG LG AFQL+DDV+DY + +EMGKN+G+ Sbjct: 121 KTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGD 180 Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRA 287 D GKPTLP++ A Q G + + I + L + M + +L T +A Sbjct: 181 DLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKAN-GMSRLNEILAAMEQTGSLQYTIEKA 239 Query: 288 YSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 KA L LP+S +K++L+ + + R Sbjct: 240 QYEADKAIAELAVLPESEYKQALITLAHMAVNR 272 >gi|2829443|sp|P55785|HEPS2_BACST RecName: Full=Heptaprenyl diphosphate synthase component 2; Short=HEPPP synthase subunit 2 gi|1731683|dbj|BAA08725.1| component II of heptaprenyl diphosphate synthase [Geobacillus stearothermophilus] Length = 320 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 86/320 (26%), Positives = 158/320 (49%), Gaps = 4/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + D+ V + + + S+ + + +L+ +GGKR+RP+ L A +Y Sbjct: 3 LKAMYSFLSDDLAAVEEELERAVQSEYGPLGEAALHLLQAGGKRIRPVFVLLAARFGQYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD+L +++ Sbjct: 63 LERMKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLER 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E + A + L+ + GE+ Q+ D YL I+ KTA+L +A+ ++ Sbjct: 123 MAELGNPRAHQVLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L AG + + L +G +G++FQ+ DD+LD+ G ++GK G D G TLPV+ Sbjct: 183 ALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVLY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A +R K + + V + ++ A+ + + Y KA L Sbjct: 243 AL--SDERVKAAIAAV--GPETDVAEMAAVISAIKRTDAIERSYALSDRYLDKALHLLDG 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LP + + L ++ + +R Sbjct: 299 LPMNEARGLLRDLALYIGKR 318 >gi|189184004|ref|YP_001937789.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda] gi|189180775|dbj|BAG40555.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda] Length = 338 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 119/325 (36%), Positives = 193/325 (59%), Gaps = 4/325 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVE-MIPDVVKYLIFSGGKRLRPMLTLATALMLEY 59 + L KDM +VN +IL I S E +I +V Y +GGKR+RPMLT+ + + Y Sbjct: 13 IDKLSKFLDKDMSEVNNVILDCISSSQEQLIYEVGTYFFNAGGKRIRPMLTIIISKLFNY 72 Query: 60 RGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119 G +H LA A+E IH+ATLLHDDVVD+S +RR L W +TS+L+GDFL SQ+F Sbjct: 73 HGLSHYYLAAAVELIHSATLLHDDVVDESKMRRSHPTVHLKWDTKTSILIGDFLFSQSFK 132 Query: 120 MVIETKSQEALEALSLVACTLAEGELRQLSLSKNLD-VTEEDYLHVIKSKTAVLFSAALE 178 ++I++ S AL++ SL T+ GE++QL+ N +TE++Y VI++KTA LF + E Sbjct: 133 LMIKSNSIRALKSFSLSFNTIITGEVKQLTQLHNQKIITEDEYFRVIQAKTAELFGTSCE 192 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 ++++I+ +K++G+ LG+ FQ+VDD+LDY G + +GKN+G+DF GK TLP+ Sbjct: 193 IAAIISNQSAPTCLLVKTFGIKLGLIFQIVDDILDYFGNSDSLGKNVGDDFMEGKATLPI 252 Query: 239 ILAFQ-RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDS 297 I+A+ ++ E++FW + ++ + A ++ + L + + Q+ D Sbjct: 253 IMAYNCASSQNERDFWHRIFLYREQKEDDFQYALSLLYTHNVLALIKQKISQLEQQVYDI 312 Query: 298 LRCLPDS-SWKKSLMEVVDFCLQRL 321 + L S +K L + + + R+ Sbjct: 313 ITKLNISLEYKNYLENLTKYIINRI 337 >gi|332159126|ref|YP_004424405.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Pyrococcus sp. NA2] gi|331034589|gb|AEC52401.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Pyrococcus sp. NA2] Length = 341 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 17/334 (5%) Query: 4 LEDLTLKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62 L + + + V+ + + I + +++ + ++ +GGKR+RP + L + + Sbjct: 6 LFERIREKAKFVDEKLFEIIPEKEPKVLYEAARHYPLAGGKRVRPFVVLTSTEAVGGDWR 65 Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122 + A AIE IH +L+HDD++D RRGK VWG ++L GD L S+AF + Sbjct: 66 KALYPAVAIELIHNYSLVHDDIMDMDETRRGKPTVHRVWGINMAILAGDLLFSKAFEAIS 125 Query: 123 ETKSQEALEA-----LSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + +A + L + L EG+ L VT E+Y++++ KT LF A+ Sbjct: 126 RAEVPPEKKAKILETIVLASNELCEGQAMDLEFENREAVTIEEYMNMVSGKTGALFEASA 185 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ ++ AL +G N+GIAFQ+ DDVLD + ++GK +G D R GK TL Sbjct: 186 KIGGIVGSESEEYINALARWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSDIRKGKKTLI 245 Query: 238 VILAFQRGTKREKNFWKSTIND-------GKISVENLK----KAFIIMRENRALVDTEYR 286 V F+ ++ K + I E++K +A +++E ++ Sbjct: 246 VAHFFENADEKAKERFLKVFGKYAGDVRGSGIIEEDVKAEVMEAIELLKEYGSIDYAAKV 305 Query: 287 AYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 A KA ++L LP+S ++ L + +F ++R Sbjct: 306 AKELVDKANEALSILPESKARRDLELLANFIVER 339 >gi|255038819|ref|YP_003089440.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053] gi|254951575|gb|ACT96275.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053] Length = 326 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 94/320 (29%), Positives = 168/320 (52%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K ++ +M+ + + S+V ++ ++ Y++ GK+LRPM +A + Sbjct: 7 IKEIQAPIADEMKAFEQKFRQFMKSEVMLLDQIMNYIVRRKGKQLRPMFVFLSAGVCGNI 66 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 ++ IE +HTATL+HDDVVDDS RRG + +W N+ +VLVGD+LLS+ + Sbjct: 67 SESTYRGGAMIELLHTATLVHDDVVDDSNYRRGFFSVNALWKNKIAVLVGDYLLSRGLLL 126 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ + + L+ +S L+EGEL Q+ ++ LD+ EE Y +I+ KTA L ++ V Sbjct: 127 SVDHEEFKILKIVSTAVRELSEGELLQIEKARRLDINEEVYYEIIRQKTASLIASCCAVG 186 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 + G V + ++G +G+AFQ+ DD+ DY +E+GK +G D + K TLP+I Sbjct: 187 ASSVGAAKEVVDKMHAFGEKVGMAFQIKDDLFDY--GEDEIGKPLGIDIKEKKMTLPLIY 244 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A EK + I + + + ++++ L + Y ++A L Sbjct: 245 ALNHAPWLEKRRIINIIRNESHKPNKVSEVIAFVKDSGGLRYAQEVMERYVKEALALLNE 304 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 DS ++SL ++V + ++R Sbjct: 305 FADSPHRRSLEQLVQYTIER 324 >gi|304406942|ref|ZP_07388596.1| heptaprenyl diphosphate synthase component II [Paenibacillus curdlanolyticus YK9] gi|304343929|gb|EFM09769.1| heptaprenyl diphosphate synthase component II [Paenibacillus curdlanolyticus YK9] Length = 325 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 100/324 (30%), Positives = 171/324 (52%), Gaps = 5/324 (1%) Query: 1 MKMLEDLTLK---DMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 MK++ DL +K D+ ++ + + I SD ++ + +L+ +GGKR+RP+ L + Sbjct: 1 MKLM-DLFVKMKGDLNEIEAELERAITSDHTLMTETSVHLLKAGGKRIRPIFVLLSGKFG 59 Query: 58 EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQA 117 +YR D +A +E IH A+L+HDDV+D++ RRG++ + W N+ ++ GD++ +A Sbjct: 60 QYRLDVMKNIAVPLELIHMASLVHDDVIDNAETRRGQLTVKSKWDNRIAMYTGDYIHGKA 119 Query: 118 FCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAAL 177 + + + + LS + GE+ Q+ N + + YL I+ KTA+L + + Sbjct: 120 LTVATKLDNPRIHQILSKAMVEMCIGEMEQIRDFFNTEQSVRQYLLRIRRKTALLIAISC 179 Query: 178 EVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLP 237 ++ +L A L +G N+G+AFQ+ DDVLD G ++GK G D R G TLP Sbjct: 180 QLGALAAETDEKYANRLYRFGYNVGMAFQIRDDVLDLCGTEKQIGKPPGSDIRQGNITLP 239 Query: 238 VILAFQRGTKREKNFWK-STINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD 296 V+LA + R K + I + + +A ++R + + E A Y QKA Sbjct: 240 VLLALHDTSLRPKLLQEIERIQSADGAAADTSEALRLIRSSNGIKQAEALADRYTQKALT 299 Query: 297 SLRCLPDSSWKKSLMEVVDFCLQR 320 +L LPD + KKSL ++ F +R Sbjct: 300 ALEGLPDLAAKKSLKDIARFVNKR 323 >gi|205373837|ref|ZP_03226639.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus coahuilensis m4-4] Length = 320 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 89/322 (27%), Positives = 172/322 (53%), Gaps = 6/322 (1%) Query: 1 MKMLE--DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 MK+ + +D+ + + + I S + + + +L+ +GGKR+RP+ L E Sbjct: 1 MKLAQYYSFLHQDINIIEEELQQAISSSSQTLNEASLHLLQAGGKRIRPVFVLLGGKFGE 60 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 Y D +A ++E IH A+L+ DDV+DD+ +RRG + W N+ ++ GD++ +++ Sbjct: 61 YNIDVVKNVAVSLELIHMASLVLDDVIDDAEIRRGIPTVKSQWDNKVAMYTGDYIFARSL 120 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 ++ + EA + LS + +GE+ Q+ + + DYL IK KTA+L + + + Sbjct: 121 DYMLNIPNPEAHKILSDAIVEVCKGEIAQIKDKYLFEQSLRDYLRRIKRKTALLIAVSCQ 180 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + ++++G V + L +G +G++FQ++DD+LD+ +E+GK G D G TLPV Sbjct: 181 LGAIVSGAPREVHERLYRFGYYVGMSFQIIDDILDFTATADELGKPAGGDLLQGNITLPV 240 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 + A + T R++ T+ IS + L+ + ++ + A+ + + Y +KA L Sbjct: 241 LFAMEDPTLRQQI----TLVHENISSDELQTIIVNVKNSDAIERSHQVSQQYLKKAIQEL 296 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 R LP + K +L ++ + +R Sbjct: 297 RHLPKNKAKSTLRDIATYLGKR 318 >gi|168019710|ref|XP_001762387.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686465|gb|EDQ72854.1| predicted protein [Physcomitrella patens subsp. patens] Length = 356 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 99/328 (30%), Positives = 168/328 (51%), Gaps = 14/328 (4%) Query: 3 MLEDLTL---KDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM--- 56 L DL D++ +N + K + +D M+ K + +GGKR+RP L + Sbjct: 33 TLADLVAPVSDDLQLLNDNLQKIVGADNPMLMAAAKQIFGAGGKRMRPALVFLVSRATCQ 92 Query: 57 ---LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFL 113 ++ H LA E IHTA+L+HDDV+D+S RRGK +G + +VL GDF+ Sbjct: 93 LSNIQELRPQHRRLAEITEMIHTASLIHDDVLDESDTRRGKETVHQTFGTRVAVLAGDFM 152 Query: 114 LSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173 +Q+ + + E ++ +S V A GE++Q + +VT ++YL KTA L Sbjct: 153 FAQSSWYLANLDNLEVIKLISQVIRDFASGEIKQAQNLFDTEVTLQNYLDKSYYKTASLI 212 Query: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK 233 +++ + +++ + +SV + YGM+LG+AFQ+VDD+LD+ ++GK G D G Sbjct: 213 ASSTKSAAIFSDSTSSVSNQMFDYGMHLGLAFQVVDDILDFTQTSEQLGKPAGSDLSKGN 272 Query: 234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQK 293 T PV+ A ++ + + I+ +L+ A ++ + A G Sbjct: 273 LTAPVLFALEKEPE-----LRELIDSEFTEEGSLEAAISLVHRGGGIDRARALAQEQGNL 327 Query: 294 AKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 AK SL CLP ++SL ++VD+ L+R+ Sbjct: 328 AKKSLECLPQGDTRRSLEKMVDYVLERI 355 >gi|323143046|ref|ZP_08077750.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei YIT 12066] gi|322417147|gb|EFY07777.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei YIT 12066] Length = 323 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 104/328 (31%), Positives = 170/328 (51%), Gaps = 11/328 (3%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALML- 57 M + E L +M+KV +++ + + +I +GGKR+RP L L + +L Sbjct: 1 MALFEALIGSEMKKVEATLVEGFSDSALEAHVNSLCLSIINAGGKRMRPALVLLASHLLP 60 Query: 58 ---EYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 + LA +E +HTATL+HDDV+D+S +RRG+ GN +VL GD++ Sbjct: 61 SYTDEEETAVCKLAAGVELLHTATLIHDDVIDNSLMRRGRPTLNSTSGNHVAVLAGDYMF 120 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 ++ F + + K + L +S TL GEL QL +++++ EDY I KT LF Sbjct: 121 TRCFATIKDLKKADVLSIISDTLATLVTGELDQLKNEGDVNISVEDYYTTIYCKTGALFE 180 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + ++ G + ALK+YG LG AFQ++DD LDY + +GKN GED ++ + Sbjct: 181 LSASAPAVYLGEEEKYITALKNYGRYLGNAFQIIDDCLDYSSDSKTLGKNAGEDLQDKRI 240 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 TLPVI A QR ++ EK I + +L+ + + L + + A G++A Sbjct: 241 TLPVIFALQRCSEAEKEILIKAIENA-----DLETVISYINKYDTLKECKNAAEQSGEQA 295 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 L P++ +K++L+ +V+ L R N Sbjct: 296 VKELNVFPENEYKQALISLVERALNRKN 323 >gi|226941879|ref|YP_002796953.1| IspB [Laribacter hongkongensis HLHK9] gi|226716806|gb|ACO75944.1| IspB [Laribacter hongkongensis HLHK9] Length = 322 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 129/320 (40%), Positives = 183/320 (57%), Gaps = 2/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 + + L DM V+ +I + + SDV +I V +Y+I +GGKRLRP L + A L + Sbjct: 3 VPLFRQLITDDMLAVDQVIRRSLHSDVVLIRQVAEYIIGAGGKRLRPALLILAARALGCQ 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G A IE IHTATLLHDDVVD+S RRG+ A ++GN SVLVGDFL ++AF M Sbjct: 63 GPAVHEQAAMIECIHTATLLHDDVVDESDKRRGRDTANAMFGNAASVLVGDFLYTRAFQM 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 ++ T S LE ++ +AEGE+ QL N D+TE +YL VI+ KTA LF AA V Sbjct: 123 MVHTHSLRVLEIMAEATNIIAEGEVMQLLNIGNTDLTETEYLQVIQYKTAKLFEAAGRVG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L+AG AL YGM+LG AFQ++DDVLDY G+ +GK++G+D GK TLP+I Sbjct: 183 ALLAGATPEQEAALAGYGMHLGTAFQIIDDVLDYSGDAATIGKSLGDDLAEGKTTLPLIY 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 Q G+ + + + E ++ AL +A + Q+A +L Sbjct: 243 VMQHGSPDQAAVVRGALQ--AADRERFDAVLSAVQSTPALDYAHGQAVAAAQRAVAALAG 300 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPDS +++L E+ ++R Sbjct: 301 LPDSEARQALTELALLSVER 320 >gi|193216089|ref|YP_001997288.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110] gi|193089566|gb|ACF14841.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110] Length = 324 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 101/313 (32%), Positives = 168/313 (53%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 ++E + S+V ++ V Y++ GK++RP L L +A ++ + Sbjct: 10 VKSELELFRTKFKDAMASEVGLLNKVASYILKQKGKQIRPALVLLSAKLVGGVNEGTYRA 69 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +E +HTATL+HDDVVD + +RRG A +W N+ +VL+GD+LL++ + ++ Sbjct: 70 AALVELLHTATLVHDDVVDTADMRRGLPAVNALWKNKVAVLMGDYLLARGLLLALQNGDT 129 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 L +S ++EGEL Q+ +++LD+ EE Y +I KTA L S A E+ + A Sbjct: 130 LFLNIVSDAVRRMSEGELLQIEKTRHLDIDEETYFKIISDKTASLISTACELGAASASTD 189 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 VRQ+L+ G LG+AFQ+ DD+LDY+G+ GK IG D + K TLP+I + + + Sbjct: 190 EKVRQSLRDCGEALGLAFQIRDDILDYQGDTKNTGKPIGGDIKEKKITLPLIYSLNKVGE 249 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++ S + K + EN + + A Y KA ++++ LPD K Sbjct: 250 EKRKEIISILKSDKKRALFSNDIINFVVENGGIEYADKVAKDYANKALEAIQDLPDCESK 309 Query: 308 KSLMEVVDFCLQR 320 KS+ +V+F ++R Sbjct: 310 KSIDLLVEFVIKR 322 >gi|296132634|ref|YP_003639881.1| Trans-hexaprenyltranstransferase [Thermincola sp. JR] gi|296031212|gb|ADG81980.1| Trans-hexaprenyltranstransferase [Thermincola potens JR] Length = 323 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 112/317 (35%), Positives = 168/317 (52%), Gaps = 3/317 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 K L D+ V + K + +++ + +L+ +GGKRLRP L +Y Sbjct: 4 KELFGEIRHDLVLVEKELKKIANLPEEKLLSETSGHLLNAGGKRLRPAFALLAGKTFQYD 63 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + + LA A+E IH ATL+HDDVVD S RRG + WGNQ SV GDF+ Q+ Sbjct: 64 LEKLLPLAVALELIHMATLVHDDVVDASVTRRGIPTVKAKWGNQVSVYTGDFIFGQSLIQ 123 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + + E L+ V+ ++EGE+ QL + + + DYL IK KTA+L SA+ E+ Sbjct: 124 IARCNNTKIAEILADVSVKMSEGEIVQLRTTFDPKQSLRDYLFRIKRKTALLISASCELG 183 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L AG + +AL+ YG LG+AFQ+ DD+LD E E+GK +G D R G TLPVI Sbjct: 184 ALAAGAPENFIRALRWYGYYLGMAFQITDDILDLIAEEKELGKPVGSDLRQGVVTLPVIF 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A Q+ ++E + + + +A +++ A+ + + Y KAK L Sbjct: 244 ALQKSPRKE--WLAEVVGKPDKKEGEVLEAIDEIKKCGAIEYSFGVSQRYLIKAKQRLEI 301 Query: 301 LPDSSWKKSLMEVVDFC 317 LP+S KKSL + DF Sbjct: 302 LPESHAKKSLALIADFI 318 >gi|312888574|ref|ZP_07748143.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM 18603] gi|311298888|gb|EFQ75988.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM 18603] Length = 323 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 91/317 (28%), Positives = 164/317 (51%), Gaps = 2/317 (0%) Query: 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN 63 ++ +++ + S V ++ + Y++ GK++RPM +A + ++ Sbjct: 7 IKRPIAAEIDVFEEKFKTSMQSSVPLLDRITHYIVKRKGKQIRPMFLFLSASLCGGINES 66 Query: 64 HVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIE 123 A +E +HTATL+HDDVVD+S RRG + +W N+ +VLVGDFLLS+ + IE Sbjct: 67 THRGAALVELLHTATLVHDDVVDNSYQRRGFFSINALWKNKIAVLVGDFLLSKGLLLSIE 126 Query: 124 TKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLI 183 L+ +S ++EGEL Q+ + +D+ E Y VI+ KTA L ++ + Sbjct: 127 NNDFHLLKIVSEAVRQMSEGELLQIEKVRRMDIDEPVYYDVIRQKTASLIASCCACGAAS 186 Query: 184 AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 +G ++ + ++ +G +GIAFQ+ DD+ D+ +++GK +G D + K TLP+I A Sbjct: 187 SGADDATVEKMRLFGEKIGIAFQIKDDMFDF--GTDDVGKPLGIDIKEKKITLPLIYALN 244 Query: 244 RGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPD 303 T EK + + + + + + +++ L E + Y +A + L PD Sbjct: 245 HTTPTEKKRVINLVKNHNDDAQKIAEIINFVKQTGGLEYAESQMKLYQDEAFEILHAFPD 304 Query: 304 SSWKKSLMEVVDFCLQR 320 S ++SL ++V F +R Sbjct: 305 SESRRSLEQLVRFTTER 321 >gi|239817188|ref|YP_002946098.1| trans-hexaprenyltranstransferase [Variovorax paradoxus S110] gi|239803765|gb|ACS20832.1| Trans-hexaprenyltranstransferase [Variovorax paradoxus S110] Length = 345 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 126/299 (42%), Positives = 182/299 (60%), Gaps = 2/299 (0%) Query: 6 DLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHV 65 DL DM +V+ +I +R+ + V ++ V KY+I +GGKRLRP L L + L Y G+ Sbjct: 31 DLIAGDMVEVDRVIAQRLDTGVPLVSQVSKYIISAGGKRLRPALLLLMSGALGYTGEQRF 90 Query: 66 LLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETK 125 LA +EFIHTATLLHDDVVD+S LRRG+ A +GN SVLVGDFL S+AF M+++ Sbjct: 91 NLAAVVEFIHTATLLHDDVVDESTLRRGRPTANESFGNPASVLVGDFLYSRAFQMMLDAN 150 Query: 126 SQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAG 185 + ++ L+ +AEGE+ QL + + E YL VI+SKTA LF A+ +++++AG Sbjct: 151 NMRIMQILAEATNVIAEGEVLQLMNMHDATLDESAYLRVIRSKTAKLFEASTRLAAVLAG 210 Query: 186 VQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRG 245 V +A +YG LG AFQ++DDVLDY G+ +E GKN+G+D R GK TLP+I A +RG Sbjct: 211 ATPEVEEACATYGQALGTAFQVIDDVLDYAGDAHETGKNVGDDLREGKTTLPLIFAMRRG 270 Query: 246 TKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDS 304 + + ++ I G + L K I+ AL + A ++A +LR P + Sbjct: 271 SPAQATLVRAAIEAGDTA--QLGKIVEIVHATGALEASRAAAADEAKRAIHALRDFPSN 327 >gi|71083319|ref|YP_266038.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique HTCC1062] gi|91762251|ref|ZP_01264216.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique HTCC1002] gi|71062432|gb|AAZ21435.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique HTCC1062] gi|91718053|gb|EAS84703.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique HTCC1002] Length = 337 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 123/320 (38%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEY-RG 61 L+D + + V I ++ SDV+++ + +Y I +GGKRLR +LTL +A + Y +G Sbjct: 17 QLKDSVDEKLVLVEEKIKSKLLSDVDLVQKMTEYHIDTGGKRLRALLTLGSAKLCGYTKG 76 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 + LA +E IH ATL+HDDV+D +RRGK +WGN +SVL+GD+LLS+ F M+ Sbjct: 77 GRDINLAACVEMIHGATLMHDDVIDLGNIRRGKKTLNSIWGNHSSVLIGDYLLSRCFEMM 136 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 ++ + E L+ LS + +A+GE+ QL +D+ EE Y +I +KTA LFSAA +V + Sbjct: 137 VDDGNIEVLKLLSSTSSKIAQGEVLQLQHKGEVDMLEETYFKIITAKTAELFSAATKVGA 196 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +++ + ++AL+ YG NLG+ FQ+ DD LDY ++ GK IG+DF GK TLPVIL Sbjct: 197 ILSNKETKEKEALEFYGKNLGLTFQIADDTLDYNSDLKFFGKKIGKDFLEGKITLPVILL 256 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 FQ + EK+ K+ S E+L ++++ + + +A + A +SL Sbjct: 257 FQNVSSIEKDKLKNIFKQETRSNEDLNLTLELIKKYNIINECYKKAEHFINLASNSLTVF 316 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 DS KK L + F LQR Sbjct: 317 KDSDEKKILESLTSFSLQRT 336 >gi|21674031|ref|NP_662096.1| polyprenyl synthetase [Chlorobium tepidum TLS] gi|21647180|gb|AAM72438.1| polyprenyl synthetase [Chlorobium tepidum TLS] Length = 324 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 101/315 (32%), Positives = 170/315 (53%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +++++ + S ++ V +Y++ GK++RP L + A + D Sbjct: 10 VTEELKQFQERYKTVLHSSNSLVDKVTRYVLRQQGKQIRPTLVILAAKVCGGVHDVTYRG 69 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 A +E +H+ATL+HDDVVD + +RRG + +W N+ SVL+GD+LLS+ +E K Sbjct: 70 AIMVELLHSATLIHDDVVDGAEMRRGIPSINALWKNKISVLIGDYLLSKGLLYSLENKDY 129 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 +L +S ++EGE+ Q+ +++LD+TEEDYL VI KT L + + + + + Sbjct: 130 RSLHLVSEAVRRMSEGEILQIQKTRSLDITEEDYLSVIADKTGSLIATSCAIGAASSTDS 189 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 +LKSYG LG+AFQ+ DD+LDY G+ + GK +G D ++ K TLP+I A ++ K Sbjct: 190 EDEIASLKSYGEFLGLAFQIRDDLLDYTGDSKKTGKQLGIDIKDRKITLPLIYALRQSDK 249 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 E+N KS + + + + L A + KA +S+ P+S K Sbjct: 250 SEQNKIKSILKSSRKRSVRSGEVIDFVTRKGGLDYAAEVAEGFADKALESIAHFPESDAK 309 Query: 308 KSLMEVVDFCLQRLN 322 +SL +VDF ++R + Sbjct: 310 RSLQLLVDFVMKRQH 324 >gi|224371856|ref|YP_002606022.1| IspB [Desulfobacterium autotrophicum HRM2] gi|223694575|gb|ACN17858.1| IspB [Desulfobacterium autotrophicum HRM2] Length = 327 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 104/313 (33%), Positives = 180/313 (57%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLL 67 +D+ + + + +++++ + +L+FSGGKRLRP+L L ++ + Y GD + + Sbjct: 13 VSEDLTAIEGALATNLRPNLDLVRQIAGHLLFSGGKRLRPLLFLLSSRLCNYGGDLALDV 72 Query: 68 ACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127 + E++H ATLLHDDVVD++ +RRG+ A WG VL GDFLL+++ C+ T Sbjct: 73 STLFEYLHAATLLHDDVVDEAEMRRGRKTAHSTWGAAQVVLTGDFLLARSLCLAARTGRP 132 Query: 128 EALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187 E + +S + +++GE+ QL L+++E +Y+ +IK KTAVL A ++++ Sbjct: 133 EIINVISGITEEMSQGEIDQLDKKGKLNLSEAEYMAIIKGKTAVLIQGACRSGAILSRAP 192 Query: 188 NSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTK 247 QAL YG +LG+AFQ+ DD+LDY + +GKN G D R GK TLP+ILA +R Sbjct: 193 ADREQALADYGYHLGMAFQMADDLLDYTADAATLGKNPGADLREGKLTLPLILALERADG 252 Query: 248 REKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWK 307 ++++ +S I+ + ++ K + + + DT+ RA + +AK L D K Sbjct: 253 PDRSWMESVISTQGFNDDDFYKLVEKLHLYKGIDDTQSRAEHHVDQAKKCLEPFDDCGAK 312 Query: 308 KSLMEVVDFCLQR 320 +++ + D+ + R Sbjct: 313 DTMIMLSDYAIAR 325 >gi|148239374|ref|YP_001224761.1| prenyl transferase [Synechococcus sp. WH 7803] gi|147847913|emb|CAK23464.1| Prenyl transferase [Synechococcus sp. WH 7803] Length = 323 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 101/327 (30%), Positives = 170/327 (51%), Gaps = 11/327 (3%) Query: 1 MKMLEDL---TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALML 57 M + +L D+E + + I + ++ ++L +GGKRLRP + L + L Sbjct: 1 MTTVTELLQPVEADLEILLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLVSRAL 60 Query: 58 EYRGD---NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 G+ H LA E IHTA+L+HDDVVD++ RRG + ++ +VL GDFL Sbjct: 61 SPEGELSPRHRRLAEITEMIHTASLVHDDVVDEAGTRRGVETVHSRFNHRVAVLAGDFLF 120 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 +QA + + + ++ LS V LA+GE++Q + T E YL KTA L + Sbjct: 121 AQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLFRYDTGQTFETYLEKSYCKTASLVA 180 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 + + +++G ++L YG LG+AFQ+VDD+LD+ G ++GK D +G Sbjct: 181 NSARAAGVLSGCTEPQLESLYHYGRQLGLAFQVVDDILDFTGSEQQLGKPAASDLSSGYL 240 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 T P + A ++ + N+G +L +A I+R++ A+ T A + Q++ Sbjct: 241 TAPALYALEQNPSLGVLIEREFSNEG-----DLDEALQIVRQSDAIARTRQLAERFAQES 295 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRL 321 +++L LP+S + +L+E+ DF L RL Sbjct: 296 REALSWLPESPSRTALLELPDFVLSRL 322 >gi|313205998|ref|YP_004045175.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868] gi|312445314|gb|ADQ81669.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868] gi|315022311|gb|EFT35339.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM] gi|325336561|gb|ADZ12835.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer RA-GD] Length = 325 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 100/320 (31%), Positives = 177/320 (55%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ ++ +M+ + + S V ++ V ++++ + GK++RPM A ++ Sbjct: 5 VEEIKRPIGAEMKLFEQKFYESMQSKVPLLDKVTRFIVTTKGKQMRPMFAFLCAKLVGDV 64 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + A IE IHTATL+HDDVVD+S RR + +W N+ +VLVGD+LLS++ + Sbjct: 65 NEKTYRGASMIELIHTATLVHDDVVDESFKRRNFFSINALWKNKIAVLVGDYLLSKSVLL 124 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + K + L +S ++EGEL QL ++ LD+TEE Y +I+ KTA L +A E+ Sbjct: 125 STDNKDFDLLSVISTTIREMSEGELLQLEKARKLDITEEVYYEIIRQKTATLIAACCEIG 184 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 L GV ++ + ++ +G G+AFQ+ DD+ DY + N +GK +G D + K TLP+I Sbjct: 185 VLSNGVDETMAKKMRDFGTYTGMAFQIKDDLFDYLSK-NIIGKPVGIDIKEQKMTLPLIY 243 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 + ++++ ++ TI + + +K+ ++++ L + QKAKD L Sbjct: 244 TLKSANEKDRKYYFDTIKRHNHNPKRVKELIDFVKQSGGLDYAMGVMKDFQQKAKDILEE 303 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PDS K SL ++D+ ++R Sbjct: 304 FPDSEAKTSLNLMLDYVIER 323 >gi|302831696|ref|XP_002947413.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f. nagariensis] gi|300267277|gb|EFJ51461.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f. nagariensis] Length = 389 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 99/320 (30%), Positives = 168/320 (52%), Gaps = 11/320 (3%) Query: 8 TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATA------LMLEYRG 61 DME++N + + + M+ + + +GGK+LRP++ A L Sbjct: 74 VKSDMEQMNQNLKNVVGNRHPMLMAAAEQIFGAGGKKLRPVIVFLVAHSTAQREGLTELT 133 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 D H LA E IHTA+L+HDDV+D+ +RRGK ++G + +VL GDFL +Q+ + Sbjct: 134 DKHRRLAEITEMIHTASLVHDDVLDECDIRRGKKTINSMYGTRVAVLAGDFLFAQSSWFL 193 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + E ++ +S V A GE+ Q + + D+T E YL KTA L +A+ ++ Sbjct: 194 ANLDNLEVIKLISQVIADFANGEISQAASLFDTDITLEQYLDKSFYKTASLIAASCRSAA 253 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 + + V++A+ SYG +LG+AFQ+VDDVLD+ ++GK G+D +G T P I A Sbjct: 254 VFSDSPVEVKEAMYSYGKHLGLAFQVVDDVLDFTQSTEQLGKPQGQDLASGNLTAPAIFA 313 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 ++ + I+ + +L++A ++RE + + A A +L CL Sbjct: 314 LRKSPE-----LLDIISSEFVEEGSLERALELVRETGGIEEARLLARQQADMALAALECL 368 Query: 302 PDSSWKKSLMEVVDFCLQRL 321 P+ ++SL +VD+ L+R+ Sbjct: 369 PEGPSRRSLRLMVDYVLERI 388 >gi|94969054|ref|YP_591102.1| trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis Ellin345] gi|94551104|gb|ABF41028.1| Trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis Ellin345] Length = 331 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 106/320 (33%), Positives = 175/320 (54%), Gaps = 1/320 (0%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + +L +D+ + + S+V I ++ +YL GGKRLRP L L +A ++ YR Sbjct: 11 VKEVFELISEDLLAIEREFGRDTVSNVAAITEIGEYLRNGGGKRLRPALLLLSAKLMAYR 70 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 G V L +E IHTATL+HDD++DD+ +RRG+ +A WGN VL GD+L QAF + Sbjct: 71 GLGAVRLGAVVEIIHTATLVHDDIIDDAEIRRGRPSANTQWGNSKCVLAGDWLYMQAFKV 130 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + ++ L+ L + + EGEL Q+ L ++ +++ +I KTA LFS + + Sbjct: 131 AVAERNFAVLDTLIELTQKMVEGELLQIEKLGKL-ISLQEHFDLIDRKTACLFSVCMRLG 189 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ G + L YG +G+AFQ+VDDVLD +GK +G D R GK T+ VI Sbjct: 190 GILGGATAEQIEKLGEYGHCVGMAFQIVDDVLDLTASEEVLGKPVGSDLREGKVTMAVID 249 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + T E++ + + + I++ ++ + RA + KAK ++ Sbjct: 250 ALEHCTPAERDTIVAVMRENGFVSVQHADILKILKRYDSVENALLRANEFAVKAKAAIEE 309 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 PDS +K++L+ V +F ++R Sbjct: 310 FPDSEYKRALIWVPEFVVER 329 >gi|32491227|ref|NP_871481.1| hypothetical protein WGLp478 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166434|dbj|BAC24624.1| ispB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 323 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 106/318 (33%), Positives = 178/318 (55%), Gaps = 1/318 (0%) Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61 + + L KD+ + + + S+V++I KY++ + GK +RP+ + A L Y Sbjct: 4 EKIFKLINKDIINFQIELERSLYSNVDLIKKCNKYILNNNGKFIRPIAIILAAKSLFYNK 63 Query: 62 DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMV 121 H++LA IE IH +TLLHDD++DD+ RRG + +V+GN ++L+GDF+ ++AF M+ Sbjct: 64 KKHIILASLIELIHMSTLLHDDIIDDAKKRRGNASVNVVFGNIPTILIGDFIYTRAFQMI 123 Query: 122 IETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181 + +S + + +S + EGE+ QL+ ++D+T ++Y+ +I KTA LF +L+ ++ Sbjct: 124 SKLRSFKIFKIISNAVNMIVEGEILQLTYCNSVDITIKNYMQIIYKKTAKLFEVSLQSAA 183 Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 +++ QA K+YG LGI+FQ++DD LDY+ + + GK +G D + GK TLP+I A Sbjct: 184 ILSKSSYKEEQAFKNYGRYLGISFQIIDDFLDYKSDFKKFGKILGNDLKEGKVTLPLIHA 243 Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCL 301 + + K I G S L IM E+R+L T A +KA L L Sbjct: 244 MKNSNNSQFLLIKEAIQKGNHS-HLLNDILKIMEEHRSLEYTREYAKKKIEKAISFLNEL 302 Query: 302 PDSSWKKSLMEVVDFCLQ 319 S + ++L + F L Sbjct: 303 KYSIYIEALENLAKFYLN 320 >gi|255575167|ref|XP_002528488.1| solanesyl diphosphate synthase, putative [Ricinus communis] gi|223532097|gb|EEF33905.1| solanesyl diphosphate synthase, putative [Ricinus communis] Length = 420 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 99/328 (30%), Positives = 176/328 (53%), Gaps = 11/328 (3%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALM---- 56 +K L ++ D++ +N + + ++ ++ + + +GGKR+RP L A Sbjct: 98 VKNLFEVVADDLQTLNQNLRLIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVARATAEV 157 Query: 57 --LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLL 114 L+ H LA IE IHTA+L+HDDV+D+S +RRGK ++G + ++L GDF+ Sbjct: 158 IGLKELTIKHRRLAEIIEMIHTASLIHDDVLDESNMRRGKETVHQLYGTRVAILAGDFMF 217 Query: 115 SQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174 +Q+ + ++ E ++ +S V A GE++Q S + DV E+YL KTA L + Sbjct: 218 AQSSWYLANLENIEVIKLISQVIKDFASGEIKQASSLFDCDVELEEYLIKSYYKTASLIA 277 Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234 A+ + +++ +GV SV + + YG NLG++FQ+VDD+LD+ ++GK G D G Sbjct: 278 ASTKGAAIFSGVDRSVAEQMYEYGKNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNL 337 Query: 235 TLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKA 294 T PVI A ++ TK + I +L +A ++++ R + + A A Sbjct: 338 TAPVIFALEKETK-----LREIIESEFCETGSLDEAIELVKQCRGIEKAQELAKEKADLA 392 Query: 295 KDSLRCLPDSSWKKSLMEVVDFCLQRLN 322 +L CLP +++ +L +V + L+R++ Sbjct: 393 IQNLDCLPRGAFRSALEGMVLYNLERID 420 >gi|138895788|ref|YP_001126241.1| heptaprenyl diphosphate synthase subunit II [Geobacillus thermodenitrificans NG80-2] gi|196248670|ref|ZP_03147370.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. G11MC16] gi|134267301|gb|ABO67496.1| Component II of heptaprenyl diphosphate synthase [Geobacillus thermodenitrificans NG80-2] gi|196211546|gb|EDY06305.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. G11MC16] Length = 320 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 87/322 (27%), Positives = 160/322 (49%), Gaps = 8/322 (2%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 +K + KD+ V + + + S+ + + +L+ +GGKR+RP+ L A Y Sbjct: 3 LKAMYSFLSKDLAAVEQELERTVQSEYGPLGEAALHLLQAGGKRIRPVFVLLAARFGHYD 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ LRRG+ + W N+ ++ GD+L +++ Sbjct: 63 LERIKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLER 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + E A + L+ + GE+ Q+ + YL I+ KTA+L +A+ ++ Sbjct: 123 MAELDDPRAHQVLAKTIVEVCRGEIEQIKDKYWFEQPLRTYLRRIRRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 +L AG SV + L +G +G++FQ+ DD+LD+ G ++GK G D G TLPV+ Sbjct: 183 ALAAGAPESVAKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNITLPVLY 242 Query: 241 AFQRGTKREKNFWKSTIN--DGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 A + K+ I + + + + ++ A+ + + Y +KA L Sbjct: 243 ALR------DERLKAAITAVSPETNADEMAAVISAIKRTDAIDQSYALSDRYLEKALRLL 296 Query: 299 RCLPDSSWKKSLMEVVDFCLQR 320 LP + + L ++ + +R Sbjct: 297 GELPANKARTLLHDLALYIGKR 318 >gi|229543999|ref|ZP_04433058.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans 36D1] gi|229325138|gb|EEN90814.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans 36D1] Length = 320 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 92/320 (28%), Positives = 172/320 (53%), Gaps = 4/320 (1%) Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60 ++ML D+E + + + S+ +I + L+ +GGKR+RP+ L A +Y Sbjct: 3 VQMLYSFLKTDIELIEQELANAVASNAALIQQASESLLKAGGKRIRPVFVLLGAKFGDYE 62 Query: 61 GDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCM 120 + +A A+E IH A+L+HDDV+DD+ LRRGK + W N+ ++ GD++L+ A Sbjct: 63 IERVKNVAVALELIHMASLVHDDVIDDAELRRGKPTVKAKWDNRIAMYTGDYILATALEY 122 Query: 121 VIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVS 180 + + + A + L+ + GE+ Q+ YL IK KTA+L +A+ ++ Sbjct: 123 ITKVEDLSAHQILADTLVEVCVGEIEQIKDKYRFHQNLRCYLRRIKRKTALLIAASCQLG 182 Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 ++ +G ++ + L +G N+G+++Q++DD+LD+ G ++GK GED R G TLPV+ Sbjct: 183 AIASGADENIHRQLYRFGYNVGMSYQIIDDILDFTGTEKQLGKPAGEDLRQGNVTLPVLF 242 Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300 A + R+K + + L+ +++++ A+ + + Y +KA +L Sbjct: 243 AREDPKIRKKLEYVH----EHMPKAELEDVVRLVKQSGAIERSYAVSNCYLEKALGTLEQ 298 Query: 301 LPDSSWKKSLMEVVDFCLQR 320 LPD+ +KK L ++ + +R Sbjct: 299 LPDTRFKKMLADLARYMGKR 318 >gi|253576413|ref|ZP_04853743.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844306|gb|EES72324.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 324 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 96/322 (29%), Positives = 165/322 (51%), Gaps = 2/322 (0%) Query: 1 MKMLEDL--TLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLE 58 MK+L+ KDM+ + + + I D +++ + +L+ +GGKRLRP+ L Sbjct: 1 MKLLDIFGALKKDMDFIERQLYRSIDGDDDLLSETSLHLLKAGGKRLRPVFVLLGGKFGN 60 Query: 59 YRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118 Y +A +E IH+A+L+HDDV+DD+ RRGK + W N+ ++ GD++ ++A Sbjct: 61 YDLQKLQYIAVPLELIHSASLVHDDVIDDADTRRGKATVKSKWDNRIAMYTGDYIYAKAL 120 Query: 119 CMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALE 178 V E + L+ ++ GE+ Q+ N + + +YL I+ KTA+L + + + Sbjct: 121 MQVSELANPYIHRILAKAMVQMSIGEMEQIRDFFNTEQSVRNYLLRIRRKTALLIAISCQ 180 Query: 179 VSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 + ++ A V L YG N+G+AFQ+ DD+LD G +GK G D R G TLPV Sbjct: 181 LGAMAADAPAKVSALLYRYGYNVGMAFQIRDDLLDLFGTEKTIGKPPGSDMRQGNITLPV 240 Query: 239 ILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSL 298 + A Q RE + ++ +A ++R + + E A Y KA +L Sbj