PSIBLAST alignment of GI: 254780755 and protein with PDB id: 1rqj
gi|46015527|pdb|1RQJ|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Risedronate Length = 299
>gi|46015528|pdb|1RQJ|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Risedronate Length = 299
Score = 75.8 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 52/332 (15%)
Query: 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
+ LE + + ++ I + + + ++Y GGKRLRP L AT M
Sbjct: 5 QQLEACVKQANQALSRFI-APLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST 63
Query: 62 DNHVLLACAIEFIHTATLLH--DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
+ A A+E IH +L+H +DD LRRG + +G ++L GD L + AF
Sbjct: 64 NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFS 123
Query: 120 MVIETKSQEALEALSLVA----------CTLAEGELRQLSLSKNLDVTEEDYLHVIKSKT 169
++ + E + + + G+ L +
Sbjct: 124 ILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTG 183
Query: 170 AVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDF 229
A++ +A + L Y ++G+AFQ+ DD+LD G+ +GK G D
Sbjct: 184 ALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQ 243
Query: 230 RNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYS 289
+ GK T P ++ L +A
Sbjct: 244 QLGKSTYP----------------------------------ALL----GLEQARKKARD 265
Query: 290 YGQKAKDSLRCL-PDSSWKKSLMEVVDFCLQR 320
A+ SL+ L S +L + D+ +QR
Sbjct: 266 LIDDARQSLKQLAEQSLDTSALEALADYIIQR 297