RPSBLAST alignment of GI: 254780755 and protein with PDBid: 1wy0

>1wy0_A Geranylgeranyl pyrophosphate synthetase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferase; 2.20A {Pyrococcus horikoshii OT3} Length = 342

 Score =  152 bits (383), Expect = 1e-37
 Identities = 96/340 (28%), Positives = 162/340 (47%), Gaps = 20/340 (5%)

Query: 1   MKMLEDLT---LKDMEKVNFLILKRICS-DVEMIPDVVKYLIFSGGKRLRPMLTLATALM 56
           M+  E+L     +  + ++  I + I   D  ++ +  ++   +GGKR+RP + L +   
Sbjct: 1   MEKYEELFARIKEKAKLIDEKIFELIPEKDPRVLYEAARHYPLAGGKRVRPFVVLTSTEA 60

Query: 57  LEYRGDNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQ 116
           +       +  A AIE IH  +L+HDD++D    RRGK     +WG   ++L GD L S+
Sbjct: 61  VGGDPLRAIYPAVAIELIHNYSLVHDDIMDMDETRRGKPTVHRIWGVNMAILAGDLLFSK 120

Query: 117 AFCMVIETKSQEAL-----EALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAV 171
           AF  V   +          E +   +  L EG+ R L   K   VT E+Y+ +I  KT  
Sbjct: 121 AFEAVARAEIPPEKKARVLEVIVKASNELCEGQARDLEFEKKSTVTIEEYMEMISGKTGA 180

Query: 172 LFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRN 231
           LF A+ +V  +I        +AL S+G N+GIAFQ+ DDVLD   +  ++GK +G D R 
Sbjct: 181 LFEASAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSDIRK 240

Query: 232 GKPTLPVILAFQRGTKREKNFWKSTINDG-----------KISVENLKKAFIIMRENRAL 280
           GK TL V   F+   +++K  +                  +    ++ +A  ++++  ++
Sbjct: 241 GKKTLIVAHFFENADEKDKQRFLKIFGKYAGDVKGRGIIEEDIKSDVMEAIDLLKKYGSI 300

Query: 281 VDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320
                 A    +KA ++LR LP S  +  L  +  F ++R
Sbjct: 301 DYAAEIAKDMIKKANEALRILPKSKARMDLELLAKFIVER 340