RPSBLAST alignment of GI: 254780755 and protein with PDBid: 2e8v
>2e8v_A Geranylgeranyl pyrophosphate synthetase; prenyltransferase, farnesyl pyrophosphate, bisphosphonate; HET: GRG; 1.80A {Saccharomyces cerevisiae} PDB: 2e8t_A* 2e8u_A* 2dh4_A* 2e8w_A* 2e8x_A* 2e90_A* 2e91_A* 2e92_A* 2e93_A* 2e94_A* 2e95_A* 2z4v_A* 2z4w_A* 2z4x_A* 2z4y_A* 2z4z_A* 2z50_A* 2z52_A* 2z78_A* 2z7h_A* ... Length = 340
Score = 124 bits (312), Expect = 2e-29
Identities = 62/338 (18%), Positives = 137/338 (40%), Gaps = 20/338 (5%)
Query: 3 MLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
M ++ ++++ + +I +++ GK R L + ++ D
Sbjct: 1 MTKNKMEAKIDELINNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKD 60
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
+++ +E +H ++LL DD+ D++ LRRG+ + L++G +++ +++ +A +V
Sbjct: 61 QLAIVSQIVELLHNSSLLIDDIEDNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVS 120
Query: 123 ETKSQEALEALSL-----VACTLAEG---ELRQLSLSKNLDVTEEDYLHVIKSKTAVLFS 174
+ ++E L + L G ++ + T+E YL+++ +KT LF
Sbjct: 121 QLTTKEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFR 180
Query: 175 AALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKP 234
L + ++ + + LGI +Q+ DD L+ + K ED GK
Sbjct: 181 LTLRLMEALSPSSHHGHSLVPFIN-LLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKL 239
Query: 235 TLPVILAFQ----RGTKREKNFWKSTINDGKISVENLKKAF-IIMRENRALVDTEYRAYS 289
+ P++ A +G + N + + K I+ + +L T+
Sbjct: 240 SFPIVHALNFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILEFDTNSLAYTKNFINQ 299
Query: 290 YGQKAKDS--LRCLPD----SSWKKSLMEVVDFCLQRL 321
K+ + LPD S +L + + + + L
Sbjct: 300 LVNMIKNDNENKYLPDLASHSDTATNLHDELLYIIDHL 337