RPSBLAST alignment of GI: 254780755 and protein with PDBid: 3dyh
>3dyh_A Farnesyl pyrophosphate synthase; protein-bisphosphonate complex, isoprene biosynthesis, transferase; HET: 721; 1.94A {Trypanosoma brucei} PDB: 2ewg_A* 2i19_A* 2p1c_A* 3dyf_A* 3dyg_A* 2ogd_A* 3efq_A* 3egt_A* Length = 390
Score = 167 bits (423), Expect = 3e-42
Identities = 66/358 (18%), Positives = 126/358 (35%), Gaps = 53/358 (14%)
Query: 13 EKVNFLILKRICSDVEMIPDVVKYL------IFSGGKRLRPMLTLATALMLEYRGDNH-- 64
+++ +L+ + +M P+ V+YL GGK R + + A L N+
Sbjct: 34 DEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAESLLSLSPNNNG 93
Query: 65 ---------------VLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLV 109
+ IEF+ L+ DD++D+S RRGK +
Sbjct: 94 EEDDGARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWYRHPDVTVQCAI 153
Query: 110 GDFLLSQAFCMVIETKS-------QEALEALSLVACTLAEG----------------ELR 146
D LL +++ ++ Q+ L + V T A G ++
Sbjct: 154 NDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVS 213
Query: 147 QLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL--IAGVQNSVRQALKSYGMNLGIA 204
Q + + + T +Y ++K KTA V L + + M +G
Sbjct: 214 QPTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEELAMLMGEY 273
Query: 205 FQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISV 264
FQ+ DDV+D +GK G D ++ K + + + + + +K+ G
Sbjct: 274 FQVQDDVMDCFTPPERLGKV-GTDIQDAKCSWLAVTFLAKASSAQVAEFKANY--GSGDS 330
Query: 265 ENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSS--WKKSLMEVVDFCLQR 320
E + + E D + ++ K+ + L S + S+ + +R
Sbjct: 331 EKVATVRRLYEEADLQGDYVAYEAAVAEQVKELIEKLRLCSPGFAASVETLWGKTYKR 388