RPSBLAST alignment of GI: 254780755 and protein with PDBid: 3kra

>3kra_B Geranyl diphosphate synthase small subunit; prenyltransferase, isoprene biosynthesis, isoprenyl pyrophosphate synthase, transferase; 1.90A {Mentha x piperita} PDB: 3krc_B* 3krf_B* 3kro_B* 3krp_B* Length = 274
 Score =  182 bits (462), Expect = 1e-46
 Identities = 35/240 (14%), Positives = 84/240 (35%), Gaps = 26/240 (10%)

Query: 28  EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDVVDD 87
           E +   + +L F+        L LA   ++       +     I  +H A  +H+ +   
Sbjct: 26  ETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQAMXXXXXIHLVHAAAYVHEHLPLT 85

Query: 88  SA-LRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAE---- 142
                  K A +  +G    +L GD ++   F ++  +      +    +   + E    
Sbjct: 86  DGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRILRVIIEISRA 145

Query: 143 -------GELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALK 195
                    L +     + + + +   +V K K   + +      +++ G      Q L+
Sbjct: 146 GGPEGMISGLHREEEIVDGNTSLDFIEYVCKKKYGEMHACGAACGAILGGAAEEEIQKLR 205

Query: 196 SYGMNLGI---------AFQLVDDVLDYRGE---VNEMGKNIGED--FRNGKPTLPVILA 241
           ++G+  G          + QL+D+ +  + +   + E+G   G++    +     P + A
Sbjct: 206 NFGLYQGTLRGMMEMKNSHQLIDENIIGKLKELALEELGGFHGKNAELMSSLVAEPSLYA 265