RPSBLAST alignment of GI: 254780755 and protein with PDBid: 3lji
>3lji_A Geranyltranstransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; HET: MSE; 1.39A {Pseudomonas fluorescens} Length = 304
Score = 183 bits (465), Expect = 5e-47
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 17/276 (6%)
Query: 19 ILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTAT 78
+ ++ + + ++Y + +GGKR+RP+L A L + + ACA+E IH +
Sbjct: 21 LFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYS 80
Query: 79 LLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLV 136
L+HDD+ +DD LRRG+ + ++L GD L S AF +++ +A + L
Sbjct: 81 LVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLR 140
Query: 137 ACTL---AEGELRQL------SLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQ 187
T A G + S L + ++ ++ + KT L A++ + +L +G
Sbjct: 141 MVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGALIEASVILGALASGRA 200
Query: 188 NSVRQA-LKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQRGT 246
L++Y +G+AFQ+ DD+LD + +GK G D KPT P +L
Sbjct: 201 EKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLAAAK 260
Query: 247 KREKNFWKSTINDGKI---SVENLKKA--FIIMREN 277
+ ++ + + E L++ +I+ R +
Sbjct: 261 EYALELRDQALHALRPFDAAAEPLRELARYIVERRS 296