RPSBLAST alignment of GI: 254780755 and protein with PDBid: 3lom
>3lom_A Geranyltranstransferase; geranyltransferase, structural genomics, PSI, protein structure initiative, nysgrc; 2.30A {Legionella pneumophila subsp} Length = 313
Score = 215 bits (549), Expect = 9e-57
Identities = 70/295 (23%), Positives = 122/295 (41%), Gaps = 18/295 (6%)
Query: 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
K + D + E +L I I + Y +FSGGKR+RP+L +++
Sbjct: 9 NKQVIDKYTQRHELYLEQLLNEIIIPAPQIRSALHYALFSGGKRIRPILVYLAGDLIDVD 68
Query: 61 GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
++A A+E H +L+HDD+ +D+ LRRGK + + T++LVGD + + A
Sbjct: 69 QGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAI 128
Query: 119 CMVIETKSQE----------ALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSK 168
+++ S + + + G+ LS VTEE + K
Sbjct: 129 EVLLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLLK 188
Query: 169 TAVLFSAALEVSSLI-AGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGE 227
T L A E+ V ++ AL++YG ++G+ FQ+ DD LD +GK
Sbjct: 189 TGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYAPTQILGKGRSS 248
Query: 228 DFRNGKPTLPVILAFQRGTKREKNFWKSTINDGKISVENLKK-----AFIIMREN 277
D N K T + Q+ + ++ ++ ++ + R N
Sbjct: 249 DQANQKTTFATLFNKQQLEEEIAVHYQIAMDSLRLFGSKAAALIELTKQLQNRSN 303