RPSBLAST alignment of GI: 254780755 and protein with PDBid: 3mzv
>3mzv_A Decaprenyl diphosphate synthase; transferase, structural genomics, PSI-2, protein structure initiative; 1.90A {Rhodobacter capsulatus} Length = 341
Score = 283 bits (725), Expect = 4e-77
Identities = 145/319 (45%), Positives = 203/319 (63%), Gaps = 1/319 (0%)
Query: 4 LEDLTLKDMEKVNFLILKRICSD-VEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGD 62
L +DM VN LI +R+ S+ IP+V +LI +GGKRLRPMLTLA A ++ Y G
Sbjct: 14 LAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYGGP 73
Query: 63 NHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVI 122
HV LA +EFIHTATLLHDDVVD+S RRG+ A L+W N++SVLVGD+L +++F ++
Sbjct: 74 FHVHLAATVEFIHTATLLHDDVVDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMT 133
Query: 123 ETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSL 182
+T + +E L+ + +AEGE+ QL+ ++NL TE+ YL VI+ KTA LFSAA EV +
Sbjct: 134 DTGNMRVMEILANASAVIAEGEVLQLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGI 193
Query: 183 IAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAF 242
I G QAL YG LGIAFQ+VDD+LDY G+ E+GKN G+DFR K T+PVI A
Sbjct: 194 IGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGGKSAEIGKNTGDDFRERKLTMPVIKAV 253
Query: 243 QRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP 302
+ E+ FWK I G +L+ A +M ++ L T A + A+ +L LP
Sbjct: 254 ALADEAERAFWKRVIEKGDQQDGDLEHAMALMTKHGTLEATRLAAIGWTDTARKALAKLP 313
Query: 303 DSSWKKSLMEVVDFCLQRL 321
D ++ L ++ D+ ++R+
Sbjct: 314 DHPLRQMLDDLADYVVERV 332