RPSBLAST alignment of GI: 254780755 and protein with PDBid: 3p8r

>3p8r_A Geranyltranstransferase; isoprenyl synthase, structural genomics, PSI, protein struct initiative, nysgrc; 2.50A {Vibrio cholerae} Length = 302
 Score =  190 bits (484), Expect = 3e-49
 Identities = 74/294 (25%), Positives = 141/294 (47%), Gaps = 18/294 (6%)

Query: 1   MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYR 60
           ++ L     ++ ++++  + +     + +I + ++Y +  GGKR RP L   T  ML   
Sbjct: 10  LEALSSYQQRNNQQLDQWLNRIPFQTLPLI-EAMRYGLLLGGKRARPYLVYITGQMLGCE 68

Query: 61  GDNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAF 118
             +    A A+E IH  +L+HDD+  +DD  LRRGK    + +   T++L GD L + AF
Sbjct: 69  LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 128

Query: 119 CMVIETKSQEALEAL------SLVACTLAEGELRQLSL---SKNLDVTEEDYLHVIKSKT 169
            ++ E     A E        +L   + A+G     +L   ++N  ++ E+   + ++KT
Sbjct: 129 TILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 188

Query: 170 AVLFSAALEVSSLIAGVQN-SVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGED 228
             L   A+ + +L AG +  ++   L  Y   +G+AFQ+ DD+LD   +   +GK  G D
Sbjct: 189 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 248

Query: 229 FRNGKPTLPVILAFQRGTKREKNFWK---STINDGKISVENLKKA--FIIMREN 277
               K T P +L  +   ++     +     +     + E+L++   +++ R+N
Sbjct: 249 QELNKSTYPALLGLEGAQQKAHTLLQEALLALEAIPYNTEHLEEFARYVVERKN 302