HHsearch alignment for GI: 254780757 and conserved domain: PRK01584
>PRK01584 alanyl-tRNA synthetase; Provisional.
Probab=97.77 E-value=0.00014 Score=54.47 Aligned_cols=167 Identities=20% Similarity=0.264 Sum_probs=108.5
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEECCCCC---------CCC--CCCCHHHHHHHCCCCCCEEEEECCCCCCCCC-CCCCCC
Q ss_conf 7799999999999986695896116754---------333--2248578987448344016764155788765-546677
Q gi|254780757|r 11 LSFQNIILTLTQYWAQQGCTILQPYDME---------VGA--GTFHPSTTLRALGPLSWKAAYVQPSRRPLDG-RYAENP 78 (307)
Q Consensus 11 ~~fq~ii~~L~~fW~~~GC~i~qpyd~e---------~GA--gT~hp~T~lr~lg~~pw~~aYvqPsrRP~Dg-RYGeNP 78 (307)
T Consensus 1 mt~~eiR~~Fl~fF~~kgH~~v~ssslvp~~dptllftnAGm~~Fk~~-f~G~~~p~~~r~~~~QkCiR~~DldnVG--~ 77 (593)
T PRK01584 1 MTLDELRKKYIDFFKSKGHVEIAGKSLVPENDPTVLFNTAGMQPLVPY-LLGEPHPSGDMLVNVQKCLRTGDIDEVG--D 77 (593)
T ss_pred CCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEECCCCCCCHH-HCCCCCCCCCCCCCCCCEEECCCHHHCC--C
T ss_conf 988999999999998789888378771779999835740451017123-2588899999745675313337563368--8
Q ss_pred CCCCEEEEEEEEE--------------------------CCCCH-----------------HHHHHHHHHHHHCCCCCCC
Q ss_conf 5001144445575--------------------------79833-----------------5899999999981999621
Q gi|254780757|r 79 NRLQHYYQFQVII--------------------------KPNPL-----------------NLQNLYIESLKAVGIDPLI 115 (307)
Q Consensus 79 NRlq~y~QfQVil--------------------------KPsp~-----------------niq~lYl~SL~~iGid~~~ 115 (307)
T Consensus 78 ~~--H~TfFEMLGn~SFgdYfK~eaI~~awe~lt~~~~l~l~~~rl~vtv~~~D~~~~~D~E~~~iW----~~~Gi~--~ 149 (593)
T PRK01584 78 LS--HLTFFEMLGNWSLGAYFKEESVKYSFEFLTSPDYLNIPKDKLYVSVFEGDEDIPRDEETAKIW----ESLGIS--K 149 (593)
T ss_pred CC--CCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHH----HHCCCC--H
T ss_conf 87--527775054452331148999999999806632048883247999960587665448899999----981998--9
Q ss_pred CCEEEE--ECCCCCC--HHHHCCCCEEEEECC------------------EEEHH--HHHH-HHHCC--CCCCCCHHHHH
Q ss_conf 717988--3288870--011012321768878------------------74147--7789-98668--25775145678
Q gi|254780757|r 116 HDVRFV--EDNWESP--TLGAWGLGWECWCDG------------------MEISQ--FTYF-QQVCG--IECSPISGEIT 168 (307)
Q Consensus 116 hDIrFv--eDnWEsP--tLGAwGlGWEvwldG------------------MEItQ--FTYF-QQvGG--i~c~pv~~EiT 168 (307)
T Consensus 150 ~~I~~~~~~dNfW~~~G~~GPCGPcsEi~~d~g~~~~~~~~~~~~d~~r~lEIWNlVFmqy~r~~~G~~~pLp~k~VDTG 229 (593)
T PRK01584 150 DRIFYLSREHNFWGPVGETGPCGPDTEIFVDTGKPKCSVNCRITCSCGKYFEIWNNVFMQYNKDEDGNYEELKRKCVDTG 229 (593)
T ss_pred HHEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECEEECCCCCEEECCCCCCCCC
T ss_conf 99464576677100389988998757899746777667788987888876998654113521269997216887740368
Q ss_pred HHHHHHHHHHCCCCCEEEEE
Q ss_conf 78999999986998211332
Q gi|254780757|r 169 YGLERLAMYVQNVNSVYDIV 188 (307)
Q Consensus 169 YGLERiaMylQ~vdnvyDl~ 188 (307)
T Consensus 230 mGLERi~~vlQg~~snYdtD 249 (593)
T PRK01584 230 MGIERTIAFLQGKSSVYDTD 249 (593)
T ss_pred CCHHHHHHHHCCCCCCCCCC
T ss_conf 68999999982999742031