HHsearch alignment for GI: 254780757 and conserved domain: PRK13902
>PRK13902 alaS lanyl-tRNA synthetase; Provisional.
Probab=98.14 E-value=1.2e-05 Score=62.07 Aligned_cols=176 Identities=26% Similarity=0.409 Sum_probs=121.6
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEECCCCCC-----------CCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 67777999999999999866958961167543-----------3322485789874483440167641557887655466
Q gi|254780757|r 8 KNDLSFQNIILTLTQYWAQQGCTILQPYDMEV-----------GAGTFHPSTTLRALGPLSWKAAYVQPSRRPLDGRYAE 76 (307)
Q Consensus 8 ~~~~~fq~ii~~L~~fW~~~GC~i~qpyd~e~-----------GAgT~hp~T~lr~lg~~pw~~aYvqPsrRP~DgRYGe 76 (307)
T Consensus 55 ~~~~~~~eiR~~Fl~fF~~~gH~~v~s~plvp~~~ddllftnAgm~~Fkp~~~~G~~~pp~~~~~~sQkCiR~nDl---e 131 (898)
T PRK13902 55 SKKYSLDEMREKFLSFFEKRGHTRIKRYPVVARWRDDVYLTIASIYDFQPWVTSGIVPPPANPLVISQPCIRLNDI---D 131 (898)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEECCCHHCHHHHCCCCCCCCCCCCCCCCCCEECCCH---H
T ss_conf 6767899999999999976899891785637899998057603513240443388758999972565223004767---5
Q ss_pred CCCCC-CEEEEEEEEECCCCHH----------HHHHHHHHH-HHCCCCCCCCCEEEEECCCCCCHHHHCCCCEEEEECCE
Q ss_conf 77500-1144445575798335----------899999999-98199962171798832888700110123217688787
Q gi|254780757|r 77 NPNRL-QHYYQFQVIIKPNPLN----------LQNLYIESL-KAVGIDPLIHDVRFVEDNWESPTLGAWGLGWECWCDGM 144 (307)
Q Consensus 77 NPNRl-q~y~QfQVilKPsp~n----------iq~lYl~SL-~~iGid~~~hDIrFveDnWEsPtLGAwGlGWEvwldGM 144 (307)
T Consensus 132 nVG~t~rHhTfFEMlGn~SFg~~d~~~YfK~eaI~~awe~lt~~lgi~~~~--i~~ken~W~~g--GpcGPcsEi~~~Gl 207 (898)
T PRK13902 132 NVGRTGRHLTSFEMMAHHAFNYPDKEVYWKDETVELCFEFFTKELGIDPEE--ITFKESPWEGG--GNAGPCFEVLVRGL 207 (898)
T ss_pred HCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH--EEEECCCCCCC--CCCCCCEEEEECCE
T ss_conf 438887743545237654148997564707899999999987012878799--45624574789--99988635651979
Q ss_pred EEHH--HHHHHH-HCC--CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 4147--778998-668--257751456787899999998699821133206
Q gi|254780757|r 145 EISQ--FTYFQQ-VCG--IECSPISGEITYGLERLAMYVQNVNSVYDIVFN 190 (307)
Q Consensus 145 EItQ--FTYFQQ-vGG--i~c~pv~~EiTYGLERiaMylQ~vdnvyDl~wn 190 (307)
T Consensus 208 EiwNlVFmq~~~~~~g~~~~Lp~k~IDTGmGLERia~vlQg~~tnydt~F~ 258 (898)
T PRK13902 208 ELATLVFMQYKKDKGGKYVEMPLKIVDTGYGLERIAWASQGTPTAYDAVFG 258 (898)
T ss_pred EEEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
T ss_conf 744220234113699973308777634685699999999099953776428