HHsearch alignment for GI: 254780758 and conserved domain: PRK02126
>PRK02126 ribonuclease Z; Provisional.
Probab=99.01 E-value=3.1e-09 Score=73.46 Aligned_cols=85 Identities=20% Similarity=0.249 Sum_probs=59.2
Q ss_pred CCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHH-----
Q ss_conf 977359999708765716999988998499983899999999999974997529998698852101105678860-----
Q gi|254780758|r 1 MSKLSFHIVQVTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDL----- 75 (216)
Q Consensus 1 m~~~~~~~i~v~~~~~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~----- 75 (216)
T Consensus 1 ~~~~~~~~~~n~~~~Dp~l~v~~~~~~~~lLfDcGe~~~l~~~~l----~~Id~IFITHlHgDH~~GL~gLLr~~~gr~~ 76 (334)
T PRK02126 1 MFRLLEPRLVNGPFDDPGLYVDFLFERRALLFDLGDLHHLPPREL----LRISHIFVSHTHMDHFIGFDRLLRLCLGRPR 76 (334)
T ss_pred CCCCCCCEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHH----CCCCEEEEECCCCCHHCCCHHHHHHHCCCCC
T ss_conf 965454167568899987999716798189998998430064564----6547699826762212357999986279998
Q ss_pred CCCEEECCHHHHHH
Q ss_conf 79554058438988
Q gi|254780758|r 76 SLTIIGPHKDDAAM 89 (216)
Q Consensus 76 ~~~i~~~~~~~~~~ 89 (216)
T Consensus 77 ~L~IyGP~Gl~~~v 90 (334)
T PRK02126 77 RLRLFGPPGFADQV 90 (334)
T ss_pred CEEEECCCCHHHHH
T ss_conf 62999982489999