HHsearch alignment for GI: 254780758 and conserved domain: PRK05184
>PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional.
Probab=99.09 E-value=5.6e-10 Score=77.75 Aligned_cols=76 Identities=16% Similarity=0.251 Sum_probs=55.4
Q ss_pred EEEEEECCCCEEEEECCCCCHHHHHHHHHH-------CCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHH
Q ss_conf 699998899849998389999999999997-------4997529998698852101105678860795540584389884
Q gi|254780758|r 18 CTFLFDEESLEAVVVDPGGDLDIIKDVIQS-------RNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAMM 90 (216)
Q Consensus 18 ~~li~~~~~~~~ilID~G~~~~~i~~~l~~-------~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~ 90 (216)
T Consensus 40 sSi~v~~dg~~~~LiDasPDlr~QL~~~~~l~p~~~~r~s~i~~V~lTHaH~dH~~GL~~LRe~~~i~vya~~~~~~~L~ 119 (302)
T PRK05184 40 SSIAVSADGEDWVLVNASPDIRQQIRATPALQPARGLRDTPIAAVVLTDGQIDHVTGLLSLREGQPFPLYATPMVLEDLS 119 (302)
T ss_pred EEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHCCHHHHHCCCCCCEEECHHHHHHHH
T ss_conf 48999828986999989938999986514417543445787348998657500331788871569720674689999998
Q ss_pred CCH
Q ss_conf 012
Q gi|254780758|r 91 GKV 93 (216)
Q Consensus 91 ~~~ 93 (216)
T Consensus 120 ~~~ 122 (302)
T PRK05184 120 TGF 122 (302)
T ss_pred HCC
T ss_conf 639