HHsearch alignment for GI: 254780758 and conserved domain: TIGR02650

>TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type; InterPro: IPR013470 All tRNA molecules are synthesised as long precursors with extra sequence at both the 5' and 3' ends, which undergo several processing steps to form the mature tRNA molecule. In many bacteria the tRNA precursors do not contain the CCA sequence which forms the 3' end of the mature tRNA and is essential for aminoacylation. In these organisms ribonucleotide Z cleaves the precursor to form a 3' end to which CCA is added. Proteins in this entry, by contrast are ribonuclease Z enzymes with unusual activity. Organisms containing these proteins include the CCA sequence in the tRNA precursor and ribonuclease Z cleaves the molecule immediately after this sequence producing a mature 3' end. The sequence of these proteins differs considerably from the majority of ribonuclease Z sequences..
Probab=96.31  E-value=0.0014  Score=40.63  Aligned_cols=55  Identities=27%  Similarity=0.593  Sum_probs=35.6

Q ss_pred             EEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHH---------HHHHCCCEEECCHH
Q ss_conf             49998389999999999997499752999869885210110567---------88607955405843
Q gi|254780758|r   28 EAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQL---------KEDLSLTIIGPHKD   85 (216)
Q Consensus        28 ~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l---------~~~~~~~i~~~~~~   85 (216)
T Consensus        19 erilfdaGeGvs---ttlGskvyafkyvflthGhvdhiaGlWGvvnirnnGmGdrekPldvfyP~Gn   82 (277)
T TIGR02650        19 ERILFDAGEGVS---TTLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPKGN   82 (277)
T ss_pred             CEEEEECCCCCC---HHHCCEEEEEEEEEEECCCHHHHCCEEEEEEEECCCCCCCCCCCEEECCCCC
T ss_conf             312543578500---1111101223455432362122100023677521788864575222358865