HHsearch results for GI: 254780758 and protein with PDBid: 1e5d_A
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.95 E-value=7e-28 Score=180.48 Aligned_cols=176 Identities=18% Similarity=0.157 Sum_probs=121.6
Q ss_pred CCCC--CEEEEEECCCCEEEEECCCCC--HHHHHHHHHHC-C-CCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHH
Q ss_conf 7657--169999889984999838999--99999999974-9-9752999869885210110567886079554058438
Q gi|254780758|r 13 PFKQ--NCTFLFDEESLEAVVVDPGGD--LDIIKDVIQSR-N-FHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDD 86 (216)
Q Consensus 13 ~~~~--N~~li~~~~~~~~ilID~G~~--~~~i~~~l~~~-~-~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~ 86 (216)
|.++ |||||.++ +++|||||.. .+.+++.+++. + .+|++|++||.|+||+||++.|.++++...++.++..
T Consensus 30 ~~G~s~N~YlI~~e---~~vLIDtg~~~~~~~~~~~l~~~i~~~~I~~II~TH~H~DHiggl~~l~~~~~~~~v~~~~~~ 106 (402)
T 1e5d_A 30 PMGTTYNAYLVEDE---KTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEACQPEKIFTSSLG 106 (402)
T ss_dssp TTCEEEEEEEECSS---SCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHHCCSEEEEEHHH
T ss_pred CCCEEEEEEEEECC---CEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHH
T ss_conf 99628999999769---999995998246999999999756987888899399966788679999997799989975778
Q ss_pred HHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 988401234444320023466667418964783997620123310122-2472100000123432111100000135663
Q gi|254780758|r 87 AAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCP-GHSPGHVIYVNFENNFAHLGDTLFRSSIGRT 165 (216)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tP-GHt~g~~~~~~~~~~~lftGD~lf~~~~G~~ 165 (216)
...+... ......+...+.+|+++.+|+.+++++++| +|+++++++|.++.+++|+||.+....+...
T Consensus 107 ~~~~~~~-----------~~~~~~~~~~~~~g~~l~~g~~~l~~i~~p~~h~~~~~~~~~~~~~ilfsgD~~~~~~~~~~ 175 (402)
T 1e5d_A 107 QKAMESH-----------FHYKDWPVQVVKHGETLSLGKRTVTFYETRMLHWPDSMVSWFADEKVLISNDIFGQNIAASE 175 (402)
T ss_dssp HHHHHHH-----------HCCSSCCEEEECTTCEEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSC
T ss_pred HHHHHHC-----------CCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCC
T ss_conf 8887731-----------46766432002586389848936899967777778966999868880770454567778876
Q ss_pred ---C-----------------CCCCCHHHHHHHHHHHHH--CCCCCEEEEECCCCCCCHHH
Q ss_conf ---4-----------------679899999999999985--19997899848879888899
Q gi|254780758|r 166 ---D-----------------ILHGDYQQLINSINNKIL--PLGDEISFVCGHGPNSTIGR 204 (216)
Q Consensus 166 ---d-----------------~~~~d~~~~~~sl~~~l~--~l~~~~~v~PgHG~~tt~~~ 204 (216)
+ +...+..++.++| +++. .++.++ |+|||||...-.+
T Consensus 176 ~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~L-~~l~~l~l~~~~-I~PgHGpv~~~~~ 234 (402)
T 1e5d_A 176 RFSDQIPVHTLERAMREYYANIVNPYAPQTLKAI-ETLVGAGVAPEF-ICPDHGVIFRGAD 234 (402)
T ss_dssp CBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHH-HHHHHTTCCCSE-EEESSSCBEESHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHHCCCCCCE-EEECCCCEECCHH
T ss_conf 2234454456899987656540576399999999-999866998138-9636843015837