HHsearch results for GI: 254780758 and protein with PDBid: 1vjn_A
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; structural genomics, JCSG, PSI, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=98.56 E-value=1.9e-07 Score=61.80 Aligned_cols=136 Identities=21% Similarity=0.218 Sum_probs=78.5
Q ss_pred CCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHH
Q ss_conf 08765716999988998499983899999999999974997529998698852101105678860795540584389884
Q gi|254780758|r 11 VTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAMM 90 (216)
Q Consensus 11 v~~~~~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~ 90 (216)
+..++.+|++|..+ +..+||||-.... .......++++|++||.|.||... .+..
T Consensus 15 It~lGhs~~lIe~~--g~~ILiDP~~~~~----~~~~~~~~~D~VliSH~H~DH~~~--~~~~----------------- 69 (220)
T 1vjn_A 15 ITWFGHACFALEME--GKTIVTDPFDESV----GYPIPNVTADVVTESHQHFDHNAH--HLVK----------------- 69 (220)
T ss_dssp EEEEETTEEEEEET--TEEEEESCCC---------CCCCCBCSEEECSSCC---CGG--GGCB-----------------
T ss_pred EEEEECCEEEEEEC--CEEEEECCCCCCC----CCCCCCCCCCEEEECCCCCCCCCH--HHCC-----------------
T ss_conf 99970319999989--9999989998877----898777878899966878676751--2314-----------------
Q ss_pred CCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCC-------CCCCCCCC--CCCCCCCCCHHHHC-
Q ss_conf 012344443200234666674189647839976201233101222472-------10000012--34321111000001-
Q gi|254780758|r 91 GKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSP-------GHVIYVNF--ENNFAHLGDTLFRS- 160 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~-------g~~~~~~~--~~~~lftGD~lf~~- 160 (216)
.....+..+...++++.+++.+++- |++ .++.|+++ +.+++|+||+-+..
T Consensus 70 -------------------~~~~v~~~~g~~~~~~~~I~~v~a~-H~~~~~~~~g~~~~~~ie~~g~~I~~~GDt~~~~~ 129 (220)
T 1vjn_A 70 -------------------GNFRVIDRPGAYTVNGVKIKGVETF-HDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLT 129 (220)
T ss_dssp -------------------SSCEEECSSEEEEETTEEEEEEEEE-EC-------CEEEEEEEEETTEEEEECTTCCSCCC
T ss_pred -------------------CCEEEECCCCEEEECCEEECCCCCE-ECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCC
T ss_conf -------------------6269960456599798221243206-51888854787579999849929999689888989
Q ss_pred -----CCCCCCC---CCC-----CHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf -----3566346---798-----99999999999985199978998488
Q gi|254780758|r 161 -----SIGRTDI---LHG-----DYQQLINSINNKILPLGDEISFVCGH 196 (216)
Q Consensus 161 -----~~G~~d~---~~~-----d~~~~~~sl~~~l~~l~~~~~v~PgH 196 (216)
..|++|+ |-| ++.+.. +....+.+.. |+|-|
T Consensus 130 ~~~~~~~~~~Dva~lPigg~~~m~~~eA~----~~~~~l~pk~-vIP~H 173 (220)
T 1vjn_A 130 PAQVEEIGEIDVLLVPVGGTYTIGPKEAK----EVADLLNAKV-IIPMH 173 (220)
T ss_dssp HHHHHHHCCCSEEEEECCSSSSCCHHHHH----HHHHHTTCSE-EEEES
T ss_pred HHHHHHHCCCCEEEEECCCCCCCCHHHHH----HHHHHHCCCE-EEEEE
T ss_conf 99998528976899944996538999999----9999709999-99970