HHsearch results for GI: 254780758 and protein with PDBid: 1vjn_A

>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; structural genomics, JCSG, PSI, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=98.56  E-value=1.9e-07  Score=61.80  Aligned_cols=136  Identities=21%  Similarity=0.218  Sum_probs=78.5

Q ss_pred             CCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHH
Q ss_conf             08765716999988998499983899999999999974997529998698852101105678860795540584389884
Q gi|254780758|r   11 VTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAMM   90 (216)
Q Consensus        11 v~~~~~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~   90 (216)
                      +..++.+|++|..+  +..+||||-....    .......++++|++||.|.||...  .+..                 
T Consensus        15 It~lGhs~~lIe~~--g~~ILiDP~~~~~----~~~~~~~~~D~VliSH~H~DH~~~--~~~~-----------------   69 (220)
T 1vjn_A           15 ITWFGHACFALEME--GKTIVTDPFDESV----GYPIPNVTADVVTESHQHFDHNAH--HLVK-----------------   69 (220)
T ss_dssp             EEEEETTEEEEEET--TEEEEESCCC---------CCCCCBCSEEECSSCC---CGG--GGCB-----------------
T ss_pred             EEEEECCEEEEEEC--CEEEEECCCCCCC----CCCCCCCCCCEEEECCCCCCCCCH--HHCC-----------------
T ss_conf             99970319999989--9999989998877----898777878899966878676751--2314-----------------


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCC-------CCCCCCCC--CCCCCCCCCHHHHC-
Q ss_conf             012344443200234666674189647839976201233101222472-------10000012--34321111000001-
Q gi|254780758|r   91 GKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSP-------GHVIYVNF--ENNFAHLGDTLFRS-  160 (216)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~-------g~~~~~~~--~~~~lftGD~lf~~-  160 (216)
                                         .....+..+...++++.+++.+++- |++       .++.|+++  +.+++|+||+-+.. 
T Consensus        70 -------------------~~~~v~~~~g~~~~~~~~I~~v~a~-H~~~~~~~~g~~~~~~ie~~g~~I~~~GDt~~~~~  129 (220)
T 1vjn_A           70 -------------------GNFRVIDRPGAYTVNGVKIKGVETF-HDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLT  129 (220)
T ss_dssp             -------------------SSCEEECSSEEEEETTEEEEEEEEE-EC-------CEEEEEEEEETTEEEEECTTCCSCCC
T ss_pred             -------------------CCEEEECCCCEEEECCEEECCCCCE-ECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCC
T ss_conf             -------------------6269960456599798221243206-51888854787579999849929999689888989


Q ss_pred             -----CCCCCCC---CCC-----CHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf             -----3566346---798-----99999999999985199978998488
Q gi|254780758|r  161 -----SIGRTDI---LHG-----DYQQLINSINNKILPLGDEISFVCGH  196 (216)
Q Consensus       161 -----~~G~~d~---~~~-----d~~~~~~sl~~~l~~l~~~~~v~PgH  196 (216)
                           ..|++|+   |-|     ++.+..    +....+.+.. |+|-|
T Consensus       130 ~~~~~~~~~~Dva~lPigg~~~m~~~eA~----~~~~~l~pk~-vIP~H  173 (220)
T 1vjn_A          130 PAQVEEIGEIDVLLVPVGGTYTIGPKEAK----EVADLLNAKV-IIPMH  173 (220)
T ss_dssp             HHHHHHHCCCSEEEEECCSSSSCCHHHHH----HHHHHTTCSE-EEEES
T ss_pred             HHHHHHHCCCCEEEEECCCCCCCCHHHHH----HHHHHHCCCE-EEEEE
T ss_conf             99998528976899944996538999999----9999709999-99970