HHsearch results for GI: 254780758 and protein with PDBid: 1ycg_A
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.95 E-value=4e-28 Score=181.92 Aligned_cols=172 Identities=13% Similarity=0.133 Sum_probs=119.8
Q ss_pred CCCEEEEEECCCCEEEEECCCCC--HHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHH
Q ss_conf 57169999889984999838999--99999999974--997529998698852101105678860795540584389884
Q gi|254780758|r 15 KQNCTFLFDEESLEAVVVDPGGD--LDIIKDVIQSR--NFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAMM 90 (216)
Q Consensus 15 ~~N~~li~~~~~~~~ilID~G~~--~~~i~~~l~~~--~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~ 90 (216)
..|||||.++ +.+|||||.. .+.+++.|++. ..+|++|++||.|+||+||++.|.++++...+..++.....+
T Consensus 35 ~~NsYlI~~~---~~vLIDtg~~~~~~~~~~~l~~~~~~~~I~~Ii~TH~H~DH~Gg~~~l~~~~p~~~v~~~~~~~~~~ 111 (398)
T 1ycg_A 35 TYNAYLIVDD---KTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFDSL 111 (398)
T ss_dssp EECCEEECSS---SCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHCTTCEEEECHHHHHHH
T ss_pred EEEEEEEECC---CEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHH
T ss_conf 7999999729---9999949984679999999997559768659992789867770599999868999899689999877
Q ss_pred CCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC---
Q ss_conf 01234444320023466667418964783997620123310122-24721000001234321111000001356634---
Q gi|254780758|r 91 GKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCP-GHSPGHVIYVNFENNFAHLGDTLFRSSIGRTD--- 166 (216)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tP-GHt~g~~~~~~~~~~~lftGD~lf~~~~G~~d--- 166 (216)
... ..........+.+++++.+|+..++++++| ||+|+++++|.++.++||+||+.....+....
T Consensus 112 ~~~-----------~~~~~~~~~~~~~g~~l~lg~~~~~~~~~p~~h~~~~~~~~~~~~~iLfsgD~~~~~~~~~~~~~d 180 (398)
T 1ycg_A 112 KAH-----------YSHIDFNYTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMFTYVPEEALLLPNDAFGQHIATSVRFDD 180 (398)
T ss_dssp HHH-----------TCSCCCEEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBGG
T ss_pred HHH-----------CCCCCCCCEEECCCCEEEECCCEEEEEECCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 640-----------246775506825998898168159999789888888579998898889918846767788653031
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHCCCCCE-EEEECCCCCCC
Q ss_conf -----------------679899999999999985199978-99848879888
Q gi|254780758|r 167 -----------------ILHGDYQQLINSINNKILPLGDEI-SFVCGHGPNST 201 (216)
Q Consensus 167 -----------------~~~~d~~~~~~sl~~~l~~l~~~~-~v~PgHG~~tt 201 (216)
....+..++.++| +++..|+.+. .|+|||||...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~l~~L~l~i~~I~PgHGpv~~ 232 (398)
T 1ycg_A 181 QVDAGLIMDEAAKYYANILMPFSNLITKKL-DEIQKINLAIKTIAPSHGIIWR 232 (398)
T ss_dssp GSCHHHHHHHHHHHHHHHTGGGHHHHHHHH-HHHHHTTCCCSEEEESSSCBBC
T ss_pred CCCHHHHHHHHHHCCCCCCCCCHHHHHHHH-HHHHHCCCCCCEEEECCCCHHH
T ss_conf 122145689875312100368789999999-9998659982499708986320