HHsearch results for GI: 254780758 and protein with PDBid: 1ztc_A
>1ztc_A Hypothetical protein TM0894; structural genomics, PSI, protein structure initiative, joint center for structural genomics, JCSG; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.92 E-value=2e-25 Score=166.17 Aligned_cols=187 Identities=17% Similarity=0.214 Sum_probs=117.2
Q ss_pred CCCEEEEEECCCC-------C---CCEEEEEECCCCEEEEECCCC--CHHHHHHHHHHCCC---CEEEEEECCCCCCCCC
Q ss_conf 7735999970876-------5---716999988998499983899--99999999997499---7529998698852101
Q gi|254780758|r 2 SKLSFHIVQVTPF-------K---QNCTFLFDEESLEAVVVDPGG--DLDIIKDVIQSRNF---HVKQIWITHGHVDHVG 66 (216)
Q Consensus 2 ~~~~~~~i~v~~~-------~---~N~~li~~~~~~~~ilID~G~--~~~~i~~~l~~~~~---~i~~Ii~TH~H~DH~g 66 (216)
.-|+++++..|.. . +||++|..++ +.+|||||. ..+.+++.|++.++ +|++|++||.|+||+|
T Consensus 11 ~~m~~~~~~~g~~~~~~~~~~~~~~~~~li~~~~--~~iLIDtG~~~~~~~l~~~l~~~g~~~~~I~~Ii~TH~H~DH~g 88 (221)
T 1ztc_A 11 HHMELKILVTGGNVFVPGRLNAHFSTVVYLEHKD--RRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIF 88 (221)
T ss_dssp CCEEEEEEECCBEEEETTTEECCBCCEEEEEETT--EEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHG
T ss_pred CEEEEEEEECCCCEECCCCCCCCCEEEEEEEECC--EEEEEECCCCCCHHHHHHHHHHCCCCHHHCCEEEECCCCCCCCC
T ss_conf 5369899981897545886678823799999899--99999199972199999999984999689849995998724445
Q ss_pred CCHHHHHHHCCCEEECCHHHHH-HHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1056788607955405843898-840123444432002346666741896478399762012331012224721000001
Q gi|254780758|r 67 GAAQLKEDLSLTIIGPHKDDAA-MMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVN 145 (216)
Q Consensus 67 g~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~ 145 (216)
|+..+.+. .++........ .............. .........+.+++. .+++..++++.+||||++|+++++
T Consensus 89 g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gHt~~~~~~~~ 161 (221)
T 1ztc_A 89 NSVLFENA---TFYVHEVYKTKNYLSFGTIVGRIYSK---VISSWKNVVLLKGEE-SLFDEKVKVFHTPWHAREHLSFLL 161 (221)
T ss_dssp GGGGCTTC---EEEEEGGGGGSCGGGGCHHHHHHHHH---HHHTCCSEEEECSCC-EETTTTEEEEECCSSSTTCEEEEE
T ss_pred CHHHCCCC---CEEEEECHHHHHCCCCCCCCCCCCCC---CCCCCCEEEEECCCE-EEECEEEEECCCCCCCHHHEEEEE
T ss_conf 41210465---05541000222101222211001223---455542289706843-760205772478998834776899
Q ss_pred CCC---CCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 234---32111100000135663467989999999999998519997899848879888
Q gi|254780758|r 146 FEN---NFAHLGDTLFRSSIGRTDILHGDYQQLINSINNKILPLGDEISFVCGHGPNST 201 (216)
Q Consensus 146 ~~~---~~lftGD~lf~~~~G~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt 201 (216)
+.+ ++||+||+++.........+..+...+.++| +++..+ + .++||||++-.
T Consensus 162 ~~~~~~~iLf~GD~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~~--d-~ivpgH~~p~~ 216 (221)
T 1ztc_A 162 DTENAGRVLITGDITPNRLSYYDIIKGYGSVQVKNFL-DRVGRI--D-LLVFPHDAPLK 216 (221)
T ss_dssp EETTTEEEEECGGGSCSHHHHHHHHHTCSCHHHHHHH-HHHCCC--S-EEECSSSCCBC
T ss_pred ECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHCC--C-EEEECCCCCCC
T ss_conf 5589963999756789876774579987899999999-876449--9-99919897655