HHsearch results for GI: 254780758 and protein with PDBid: 2cbn_A
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.14 E-value=2.4e-10 Score=78.69 Aligned_cols=84 Identities=20% Similarity=0.262 Sum_probs=55.2
Q ss_pred CCEEEEEECC-CC----C-CCEEEEEE--CCCCEEEEECCCCCHHHHHHHHHHCCC---CEEEEEECCCCCCCCCCCHHH
Q ss_conf 7359999708-76----5-71699998--899849998389999999999997499---752999869885210110567
Q gi|254780758|r 3 KLSFHIVQVT-PF----K-QNCTFLFD--EESLEAVVVDPGGDLDIIKDVIQSRNF---HVKQIWITHGHVDHVGGAAQL 71 (216)
Q Consensus 3 ~~~~~~i~v~-~~----~-~N~~li~~--~~~~~~ilID~G~~~~~i~~~l~~~~~---~i~~Ii~TH~H~DH~gg~~~l 71 (216)
+|++.++=.| ++ + +.|++|.. ..++..+|||||.+. ...+.+.++ ++++|++||.|+||++|++.|
T Consensus 1 ~M~l~~LGtg~~~p~~~r~~s~~lv~~~~~~~~~~iL~DcG~g~---~~~l~~~~~~~~~i~~IfiTH~H~DH~~Gl~~l 77 (306)
T 2cbn_A 1 AMNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGT---QHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGL 77 (306)
T ss_dssp CCEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECCCTTH---HHHHHTSCCCTTTEEEEECSCCCHHHHTTHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHH---HHHHHHHCCCHHHCCEEEEECCCHHHCCCCCHH
T ss_conf 92899977689989999964889999726889948999997589---999998189966775899834668980784013
Q ss_pred HHH-------HCCCEEECCHHHHHH
Q ss_conf 886-------079554058438988
Q gi|254780758|r 72 KED-------LSLTIIGPHKDDAAM 89 (216)
Q Consensus 72 ~~~-------~~~~i~~~~~~~~~~ 89 (216)
... -+..+|++......+
T Consensus 78 l~~~~~~~~~~~l~i~gP~~~~~~l 102 (306)
T 2cbn_A 78 LCSRSMSGIIQPLTIYGPQGIREFV 102 (306)
T ss_dssp HHHHHHTTCCSCEEEEESTTHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf 3101203789876566867789999