HHsearch results for GI: 254780758 and protein with PDBid: 3hnn_A
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, NSR435A, DFA5; 1.80A {Nostoc SP}
Probab=99.94 E-value=1.5e-26 Score=172.77 Aligned_cols=169 Identities=14% Similarity=0.129 Sum_probs=115.5
Q ss_pred CCEEEEEECCCCEEEEECCCCC--HHHHHHHHHHCC--CCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHHC
Q ss_conf 7169999889984999838999--999999999749--975299986988521011056788607955405843898840
Q gi|254780758|r 16 QNCTFLFDEESLEAVVVDPGGD--LDIIKDVIQSRN--FHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPHKDDAAMMG 91 (216)
Q Consensus 16 ~N~~li~~~~~~~~ilID~G~~--~~~i~~~l~~~~--~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~~ 91 (216)
.|||||.+ .+.+|||||.. .+.+++.+++.. .+|++|++||.|.||+||++.+++.++...++.+......+.
T Consensus 43 ~N~YlI~~---d~~vLIDtG~~~~~~~~l~~~~~~~~~~~I~~IilTH~H~DH~Ggl~~~~~~~p~~~v~~~~~~~~~l~ 119 (262)
T 3hnn_A 43 SNSYVIEG---DKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLR 119 (262)
T ss_dssp EEEEEEES---SSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHHCTTCEEEECHHHHHHHH
T ss_pred EEEEEEEC---CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHH
T ss_conf 89999932---999999189755799999999963784258899959977777622599997444857997789998887
Q ss_pred CHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEE-CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC-CCCC
Q ss_conf 123444432002346666741896478399762-012331012-2247210000012343211110000013566-3467
Q gi|254780758|r 92 KVDEQARLLSIRMNARNASSDRWLQDGDTLLLG-THIFKVFHC-PGHSPGHVIYVNFENNFAHLGDTLFRSSIGR-TDIL 168 (216)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg-~~~~~vi~t-PGHt~g~~~~~~~~~~~lftGD~lf~~~~G~-~d~~ 168 (216)
.. + .........+.+++.+.++ +..++++.+ |||++|++++|.+++++||+||.+....++. +...
T Consensus 120 ~~------~-----~~~~~~~~~~~~gd~~~~~~g~~l~~i~~~~~H~~~~~~~y~~~~~vLftgD~~~~~~~~~~~~~~ 188 (262)
T 3hnn_A 120 AA------F-----PDDNLNILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYDVQTQILYTDKIFGAHICGDDVFDD 188 (262)
T ss_dssp HH------S-----SSSCCEEEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEETTTTEEEEETTTCCCCCCSCCEES
T ss_pred HH------H-----CCCCCCCCEECCCCEEEECCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCC
T ss_conf 65------2-----356643220025514762278237999668999899629998788869966634567788655067
Q ss_pred -----------------CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf -----------------98999999999999851999789984887988
Q gi|254780758|r 169 -----------------HGDYQQLINSINNKILPLGDEISFVCGHGPNS 200 (216)
Q Consensus 169 -----------------~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~t 200 (216)
..+..++.+|| +++.+|+.++ |+|||||..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~sL-~~l~~L~~~~-I~PgHGpvi 235 (262)
T 3hnn_A 189 NWESFKEDQRYYFNCLMAPHAIHVEAAL-EKISDLQVRL-YAVGHGPLV 235 (262)
T ss_dssp CGGGTHHHHHHHHHHHTGGGHHHHHHHH-HHHTTSCCSE-EEESSSSEE
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHCCCCCE-EECCCCCHH
T ss_conf 7167899999999985052499999999-9987899899-995798245