RPSBLAST alignment of GI: 254780758 and protein with PDBid: 3bk2

>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus HB27} PDB: 3bk1_A* Length = 562

 Score = 39.1 bits (90), Expect = 8e-04
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 22/176 (12%)

Query: 17  NCTFLFDEESLEAVVVDPGGDLDIIKDV--IQSRNFHVKQIWITHGHVDHVGGAAQL--- 71
           +    F EE +      PG DL +I  V  +      +K   +THGH DH+GG   L   
Sbjct: 45  DGGLAFPEEGM------PGVDL-LIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPM 97

Query: 72  --KEDLSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFK 129
              ++  + I G       + GK++E             A + + +   D + +G +   
Sbjct: 98  IFGKESPVPIYGARLTLGLLRGKLEEFGLR-------PGAFNLKEISPDDRIQVGRYFTL 150

Query: 130 VFHCPGHSPGHVIYVNFENNFAHLGDTL-FRSSIGRTDILHGDYQQLINSINNKIL 184
                 HS      V        +  T  F+      D       ++  +    +L
Sbjct: 151 DLFRMTHSIPDNSGVVIRTPIGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVL 206