BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780759|ref|YP_003065172.1| hypothetical protein
CLIBASIA_03230 [Candidatus Liberibacter asiaticus str. psy62]
(162 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780759|ref|YP_003065172.1| hypothetical protein CLIBASIA_03230 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040436|gb|ACT57232.1| hypothetical protein CLIBASIA_03230 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 162
Score = 333 bits (853), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MNFRIAMLISFLASGCVAHALLTKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVP 60
MNFRIAMLISFLASGCVAHALLTKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVP
Sbjct: 1 MNFRIAMLISFLASGCVAHALLTKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVP 60
Query: 61 KNDEKYTISSLTKKIESDTDFRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISAC 120
KNDEKYTISSLTKKIESDTDFRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISAC
Sbjct: 61 KNDEKYTISSLTKKIESDTDFRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISAC 120
Query: 121 ASDDKGNKSTLCVECPSPSTPGQYDLNHCAECENTTSKGLCP 162
ASDDKGNKSTLCVECPSPSTPGQYDLNHCAECENTTSKGLCP
Sbjct: 121 ASDDKGNKSTLCVECPSPSTPGQYDLNHCAECENTTSKGLCP 162
>gi|156380546|ref|XP_001631829.1| predicted protein [Nematostella vectensis]
gi|156218876|gb|EDO39766.1| predicted protein [Nematostella vectensis]
Length = 668
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 91 SAHDKEGSKHTMNAEFSVPKNDEKYTISACASDDKGNKSTLCVECPSPSTPGQYDLN--- 147
S H ++G K+ +A+FSVPK +EK+ I SD+ + ++ P+P Q LN
Sbjct: 328 SGHKRQGFKYLDHAKFSVPK-EEKHKIKIQYSDNTVHIWSVSPNDPAPQVQRQRWLNSLH 386
Query: 148 -HCAECENTTSK 158
HCA + T++
Sbjct: 387 EHCAYSTHYTTQ 398
>gi|134058712|emb|CAK38696.1| unnamed protein product [Aspergillus niger]
Length = 1406
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 10 SFLASGCVAHALLTKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYT-I 68
SFLAS + H LL KK ++TD R A +E K+ MN E S ++T +
Sbjct: 383 SFLASAIIHH-LLHKKSANETDPRASTAYYFFEGTAREAVKNAMNLETSAKSIVWQFTQM 441
Query: 69 SSLTKK-IESDTDFRRE--KATISLSAHDKEGSKHTMNAEFSV 108
L KK + + RRE A IS + H MN +F +
Sbjct: 442 ERLYKKSVARICEERRELDPANISSELLFENSDLHEMNVQFYI 484
>gi|257078455|ref|ZP_05572816.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|294779221|ref|ZP_06744627.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
gi|256986485|gb|EEU73787.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|294453682|gb|EFG22078.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
Length = 333
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 81 FRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISACASDDKGNKS 129
F+ K ++ L+A DK G K + N EF + N +KY A D+ NK+
Sbjct: 257 FQSGKYSLKLNASDKAGHKWSFNKEFEIKDNVKKYNEEAVNLKDQPNKN 305
>gi|332994179|gb|AEF04234.1| hypothetical protein ambt_13580 [Alteromonas sp. SN2]
Length = 6369
Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 38 TISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRR-----EKATISLSA 92
T++ +A D+ G++ + NA ++ N + + +S E +TI+L+
Sbjct: 1555 TVTATAEDEAGNEASDNATGNINTNSPTLVLDGQGETNDSSPTISGSSSLPEGSTITLTV 1614
Query: 93 HDKEGSKHTM----------NAEFSVPKNDEKYTISACASDDKGNKSTL 131
D G+ T+ NA+ +VP D YT++A A+D GN +T+
Sbjct: 1615 TDSAGNSQTITATVDTGGTFNADVNVPLADGAYTVTASATDSDGNTTTV 1663
>gi|149370702|ref|ZP_01890391.1| TonB-dependent receptor domain protein [unidentified eubacterium
SCB49]
gi|149356253|gb|EDM44810.1| TonB-dependent receptor domain protein [unidentified eubacterium
SCB49]
Length = 821
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 30 TDSRHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRREKATIS 89
TDS ++ L D + E S P E IS L +++ES+ D + A
Sbjct: 320 TDSSSLTGSVFLRLGDNNDTTSNFTDERSTPNTLE---ISRLRQELESEDDLSVQGALNY 376
Query: 90 LSAHDKEGSKHTMNAEFSVPKNDEKYTIS 118
++ D G K T++ ++ + K D+ TI+
Sbjct: 377 VNDLDDNGQKLTVDFQYEIDKEDKNSTIT 405
>gi|113460628|ref|YP_718694.1| hypothetical protein HS_0483 [Haemophilus somnus 129PT]
gi|112822671|gb|ABI24760.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 184
Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 1 MNFRIAMLISFLASGCVAHALLTKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVP 60
MN +AML + L S CV+H+ + + HEK+ +SA D E T+ F +P
Sbjct: 1 MNKILAMLTALLLSACVSHSRVN---VPEYIKHHEKSYYLVSAVDLE----TVARYFYLP 53
Query: 61 KNDEKYTISSLTKKIESDTDFRREKATIS 89
K ++T+ + +E D REK ++S
Sbjct: 54 K---EHTVENWQSAVELLHDRNREKRSLS 79
>gi|114761123|ref|ZP_01441038.1| TonB dependent, hydroxamate-type ferrisiderophore, outer membrane
receptor [Pelagibaca bermudensis HTCC2601]
gi|114545371|gb|EAU48373.1| TonB dependent, hydroxamate-type ferrisiderophore, outer membrane
receptor [Roseovarius sp. HTCC2601]
Length = 689
Score = 34.3 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 28 SDTDSRHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRREKAT 87
SD DS E + SAH + + +++A F K D YT +++D D T
Sbjct: 270 SDDDSEREMLNLGFSAHQEINADWSVDANFRYQKFDWDYT-GFYVNSVDADRD------T 322
Query: 88 ISLSAHDKEGSKHTMNAEFSV 108
IS A+D +T N + +
Sbjct: 323 ISRGANDTSEDSYTQNLDLRL 343
>gi|312902224|ref|ZP_07761433.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|310634362|gb|EFQ17645.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
Length = 333
Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 81 FRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISACASDDKGNKS 129
F+ K ++ L+A DK G K + N EF + N + Y A D+ NK+
Sbjct: 257 FQPGKYSLKLNASDKAGRKWSFNKEFEIKDNVKNYNEEAVNLKDQSNKN 305
>gi|257091202|ref|ZP_05585563.1| predicted protein [Enterococcus faecalis CH188]
gi|257000014|gb|EEU86534.1| predicted protein [Enterococcus faecalis CH188]
gi|315163217|gb|EFU07234.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
gi|315576919|gb|EFU89110.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
Length = 333
Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 81 FRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISACASDDKGNKS 129
F+ K ++ L+A DK G K + N EF + N + Y A D+ NK+
Sbjct: 257 FQPGKYSLKLNASDKAGRKWSFNKEFEIKDNVKNYNEEAVNLKDQSNKN 305
>gi|320583771|gb|EFW97984.1| hypothetical protein HPODL_0614 [Pichia angusta DL-1]
Length = 524
Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 33 RHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRREKATISLSA 92
RH++ + L ++D+ + + M++EF + + + + S+ +SDT+FR +K L+
Sbjct: 189 RHKRRLLKLVSYDEIPASYEMSSEFIEMEESQAFLLKSVANMRDSDTNFRFKKTHPGLNE 248
Query: 93 HD 94
D
Sbjct: 249 QD 250
Searching..................................................done
Results from round 2
CONVERGED!
>gi|254780759|ref|YP_003065172.1| hypothetical protein CLIBASIA_03230 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040436|gb|ACT57232.1| hypothetical protein CLIBASIA_03230 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 162
Score = 312 bits (798), Expect = 1e-83, Method: Composition-based stats.
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MNFRIAMLISFLASGCVAHALLTKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVP 60
MNFRIAMLISFLASGCVAHALLTKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVP
Sbjct: 1 MNFRIAMLISFLASGCVAHALLTKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVP 60
Query: 61 KNDEKYTISSLTKKIESDTDFRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISAC 120
KNDEKYTISSLTKKIESDTDFRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISAC
Sbjct: 61 KNDEKYTISSLTKKIESDTDFRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISAC 120
Query: 121 ASDDKGNKSTLCVECPSPSTPGQYDLNHCAECENTTSKGLCP 162
ASDDKGNKSTLCVECPSPSTPGQYDLNHCAECENTTSKGLCP
Sbjct: 121 ASDDKGNKSTLCVECPSPSTPGQYDLNHCAECENTTSKGLCP 162
>gi|332994179|gb|AEF04234.1| hypothetical protein ambt_13580 [Alteromonas sp. SN2]
Length = 6369
Score = 41.7 bits (96), Expect = 0.034, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 38 TISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRR-----EKATISLSA 92
T++ +A D+ G++ + NA ++ N + + +S E +TI+L+
Sbjct: 1555 TVTATAEDEAGNEASDNATGNINTNSPTLVLDGQGETNDSSPTISGSSSLPEGSTITLTV 1614
Query: 93 HDKEGSKHTM----------NAEFSVPKNDEKYTISACASDDKGNKSTL 131
D G+ T+ NA+ +VP D YT++A A+D GN +T+
Sbjct: 1615 TDSAGNSQTITATVDTGGTFNADVNVPLADGAYTVTASATDSDGNTTTV 1663
Score = 35.2 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 18/76 (23%)
Query: 62 NDEKYTISSLTKKIESDTDFRREKATISLSAHDKEGSKHTM------NAEFS--VPKN-- 111
NDE T I +TD +T++L+ D G+ T N +FS VP
Sbjct: 1967 NDE-------TPNISGNTDLA-PGSTVTLTVTDSAGNTQTFDAIVDANGDFSADVPNAIP 2018
Query: 112 DEKYTISACASDDKGN 127
D YT++A ASDD GN
Sbjct: 2019 DGSYTVTASASDDAGN 2034
Score = 34.8 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 38 TISLSAHDKEGSKHTMNAEFSVPKNDEKYTI------SSLTKKIESDTDFRREKATISLS 91
T++ +A D+ G+ T +A ++ T+ + T + TD E + +SL
Sbjct: 2210 TVTATAKDEAGNSSTASAAGTIDTTAPTLTLDPQGLGNDTTPTMSGSTDLA-EGSVVSLV 2268
Query: 92 AHDKEGSKHTMNAEFSVPKN----------DEKYTISACASDDKGNKSTLCVECPS-PST 140
D G+ T+ A N + Y++ A A+D+ GN +++ + +T
Sbjct: 2269 ITDSTGNIQTVTATVDAAGNFTVDLPAALAEGSYSVEATATDEAGNSTSILDNSGNIDTT 2328
Query: 141 PGQYDLNHCAECENTT 156
P + +L+ A N T
Sbjct: 2329 PPELNLDELAPENNLT 2344
>gi|195428363|ref|XP_002062242.1| GK16772 [Drosophila willistoni]
gi|194158327|gb|EDW73228.1| GK16772 [Drosophila willistoni]
Length = 847
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 20 ALLTKKIESDTDSRHEKATISLSAHDK-EGSKHTMNAEFSVPKNDEKYT--ISSLTKKIE 76
AL T+++ + ++S ++ S + K SK N S+ K DEK + IS +K
Sbjct: 375 ALFTRRMRTTSESEMKQEENSKKINSKVTKSKKDQNPFRSISKTDEKSSKSISKTDEKSS 434
Query: 77 SDTDFRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISACASDDKGNK 128
EK++ S+S D++ SK S+ K DEK + S +D+K +K
Sbjct: 435 KSISKTDEKSSKSISKTDEKSSK-------SISKTDEKSSKSISKTDEKSSK 479
>gi|239994977|ref|ZP_04715501.1| hypothetical protein AmacA2_10885 [Alteromonas macleodii ATCC
27126]
Length = 1901
Score = 39.4 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 38 TISLSAHDKEGSKHTMNAEFSVPKNDEKYTI-----SSLTKKIESDTDFRREKATISLSA 92
T++ +A D+ G++ T NA ++ N + ++ + + S T E +T++L+
Sbjct: 229 TVTATAEDEAGNEVTDNATGNINTNAPTLVLDGQGETNDSTPLISGTTSLPEGSTVTLTV 288
Query: 93 HDKEGSKHTM----------NAEFSVPKNDEKYTISACASDDKGNKSTL 131
D G+ T+ +A+ + P D YT++A A+D GN +T+
Sbjct: 289 TDSAGNTQTITATVGTGGTFSADVTTPLADGAYTVTASATDGDGNTTTV 337
>gi|256089970|ref|XP_002581006.1| meso-ectoderm gene expression control protein; single-minded
[Schistosoma mansoni]
gi|238666771|emb|CAZ37245.1| meso-ectoderm gene expression control protein [Schistosoma mansoni]
Length = 673
Score = 39.4 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 44 HDKEGSKHTMNAEFSVPKNDEKY-------TISSLTKKIESDTDFRREKATIS-LSAHDK 95
HD++ H + F++ D T S +T K+E D +F REK T++ + HDK
Sbjct: 478 HDRQNESHLLFNNFAITPGDRPEVGIVPLPTHSEMTTKLEDDVNFPREKLTMTQQNNHDK 537
Query: 96 EGSKHTMNAEFS--VPKNDEKYTIS 118
+ T +E S V +ND+ I+
Sbjct: 538 KTESMTNYSETSETVFRNDKVLMIA 562
>gi|134058712|emb|CAK38696.1| unnamed protein product [Aspergillus niger]
Length = 1406
Score = 38.6 bits (88), Expect = 0.25, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 10 SFLASGCVAHALLTKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYT-I 68
SFLAS + H LL KK ++TD R A +E K+ MN E S ++T +
Sbjct: 383 SFLASAIIHH-LLHKKSANETDPRASTAYYFFEGTAREAVKNAMNLETSAKSIVWQFTQM 441
Query: 69 SSLTKK-IESDTDFRRE--KATISLSAHDKEGSKHTMNAEFSV 108
L KK + + RRE A IS + H MN +F +
Sbjct: 442 ERLYKKSVARICEERRELDPANISSELLFENSDLHEMNVQFYI 484
>gi|123453848|ref|XP_001314781.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897420|gb|EAY02542.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 622
Score = 38.2 bits (87), Expect = 0.34, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 20/132 (15%)
Query: 30 TDSRHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTIS-SLTKK--IESDTDF----- 81
T S +E A I + D +G +H F +PK YTIS ++T K +S+T F
Sbjct: 327 TFSSNESAEIH--SFDDKGREHRFTDNFLLPKKSGYYTISYTITSKSGTKSETSFTILVN 384
Query: 82 RREKATISLSAHDK--EGSKHTMN--------AEFSVPKNDEKYTISACASDDKGNKSTL 131
+ K T+ DK G K T+ A + N YT ++K N + +
Sbjct: 385 KEPKLTLKSEPKDKYIRGEKITLYFDIFDDTFATIYIGDNYFNYTNKTVICNNKINSTFI 444
Query: 132 CVECPSPSTPGQ 143
VE P TPG
Sbjct: 445 NVEIPFGYTPGH 456
>gi|30686059|ref|NP_849425.1| CRK5 (CYSTEINE-RICH RLK5); kinase [Arabidopsis thaliana]
gi|23296342|gb|AAN13047.1| putative protein kinase [Arabidopsis thaliana]
gi|332659313|gb|AEE84713.1| cysteine-rich receptor-like protein kinase 5 [Arabidopsis thaliana]
Length = 663
Score = 38.2 bits (87), Expect = 0.35, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 23 TKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFR 82
T+K+ +D R A +SL E + ++ + +F+V K+D + SL ++ D
Sbjct: 147 TQKVTADQSDRFNDAVLSLMKKSAEEAANSTSKKFAVKKSDFSSS-QSLYASVQCIPDLT 205
Query: 83 REKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTI 117
E + L KE + + F VP + +Y +
Sbjct: 206 SEDCVMCLQQSIKELYFNKVGGRFLVPSCNSRYEV 240
>gi|3021265|emb|CAA18460.1| protein kinase-like protein [Arabidopsis thaliana]
gi|3292839|emb|CAA19829.1| protein kinase-like protein [Arabidopsis thaliana]
gi|7269160|emb|CAB79268.1| protein kinase-like protein [Arabidopsis thaliana]
Length = 650
Score = 38.2 bits (87), Expect = 0.35, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 23 TKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFR 82
T+K+ +D R A +SL E + ++ + +F+V K+D + SL ++ D
Sbjct: 130 TQKVTADQSDRFNDAVLSLMKKSAEEAANSTSKKFAVKKSDFSSS-QSLYASVQCIPDLT 188
Query: 83 REKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTI 117
E + L KE + + F VP + +Y +
Sbjct: 189 SEDCVMCLQQSIKELYFNKVGGRFLVPSCNSRYEV 223
>gi|18416074|ref|NP_567677.1| CRK5 (CYSTEINE-RICH RLK5); kinase [Arabidopsis thaliana]
gi|75333385|sp|Q9C5S8|CRK5_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 5;
Short=Cysteine-rich RLK5; AltName: Full=Receptor-like
protein kinase 6; Flags: Precursor
gi|13506749|gb|AAK28317.1|AF224707_1 receptor-like protein kinase 6 [Arabidopsis thaliana]
gi|332659312|gb|AEE84712.1| cysteine-rich receptor-like protein kinase 5 [Arabidopsis thaliana]
Length = 659
Score = 38.2 bits (87), Expect = 0.35, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 23 TKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFR 82
T+K+ +D R A +SL E + ++ + +F+V K+D + SL ++ D
Sbjct: 147 TQKVTADQSDRFNDAVLSLMKKSAEEAANSTSKKFAVKKSDFSSS-QSLYASVQCIPDLT 205
Query: 83 REKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTI 117
E + L KE + + F VP + +Y +
Sbjct: 206 SEDCVMCLQQSIKELYFNKVGGRFLVPSCNSRYEV 240
>gi|331091891|ref|ZP_08340723.1| hypothetical protein HMPREF9477_01366 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402790|gb|EGG82357.1| hypothetical protein HMPREF9477_01366 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 1995
Score = 38.2 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 13/87 (14%)
Query: 26 IESDTDSRHEKATISLSAH----DKEGS-KHTMNAEFSVPKNDEKYTISSLTKKIESDTD 80
+++D D +E AT++L A DK S K+T+ A+ +D+K S L+ D D
Sbjct: 292 VKTDLDENYENATLTLDADIRSLDKNVSGKYTVKADLYEMDSDKKVWDSPLS----FDVD 347
Query: 81 FRREKATISLSAHDK----EGSKHTMN 103
+ KAT+ SA DK GSK +N
Sbjct: 348 VKAGKATVEESADDKGQRGSGSKEVVN 374
>gi|156380546|ref|XP_001631829.1| predicted protein [Nematostella vectensis]
gi|156218876|gb|EDO39766.1| predicted protein [Nematostella vectensis]
Length = 668
Score = 38.2 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 91 SAHDKEGSKHTMNAEFSVPKNDEKYTISACASDDKGNKSTLCVECPSPSTPGQYDLN--- 147
S H ++G K+ +A+FSVPK +EK+ I SD+ + ++ P+P Q LN
Sbjct: 328 SGHKRQGFKYLDHAKFSVPK-EEKHKIKIQYSDNTVHIWSVSPNDPAPQVQRQRWLNSLH 386
Query: 148 -HCAECENTTSK 158
HCA + T++
Sbjct: 387 EHCAYSTHYTTQ 398
>gi|257078455|ref|ZP_05572816.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|294779221|ref|ZP_06744627.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
gi|256986485|gb|EEU73787.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|294453682|gb|EFG22078.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
Length = 333
Score = 37.9 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 38 TISLSAHDKEGS----KHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRREKATISLSAH 93
T++ + + G+ K N + P ++ + IS + F+ K ++ L+A
Sbjct: 216 TVTAEVYKENGTEVLHKTVKNNQSMAPNSNYDFPISW------DNQVFQSGKYSLKLNAS 269
Query: 94 DKEGSKHTMNAEFSVPKNDEKYTISACASDDKGNKS 129
DK G K + N EF + N +KY A D+ NK+
Sbjct: 270 DKAGHKWSFNKEFEIKDNVKKYNEEAVNLKDQPNKN 305
>gi|325115604|emb|CBZ51159.1| srs domain-containing protein [Neospora caninum Liverpool]
Length = 385
Score = 37.9 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 48/124 (38%), Gaps = 9/124 (7%)
Query: 38 TISLSAHDKEGSKHTMNAEFSVPKNDEKYT----ISSLTKKIESDTDFRREKATISLSAH 93
+++ S E S+ + +VP + YT + KK DTD R T++ A
Sbjct: 160 SVTWSEDATETSEDCTTKQLAVPPENFPYTDKKFVVGCVKKSHDDTDKCRVTVTVAARAS 219
Query: 94 DKEGSKHTMNAEFSVPKNDEKYTISACASDDKGNKSTLCVECPSPSTPGQYDLNHCAECE 153
K+G T+ + N E TI+ S N TL P Y +C E
Sbjct: 220 AKKG--QTVTCAYGTSSNKEPQTITLSPSQ---NAFTLICGTDGEIMPSTYQHQYCDSSE 274
Query: 154 NTTS 157
N T+
Sbjct: 275 NGTN 278
>gi|325115605|emb|CBZ51160.1| srs domain-containing protein [Neospora caninum Liverpool]
Length = 385
Score = 37.5 bits (85), Expect = 0.58, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 48/124 (38%), Gaps = 9/124 (7%)
Query: 38 TISLSAHDKEGSKHTMNAEFSVPKNDEKYT----ISSLTKKIESDTDFRREKATISLSAH 93
+++ S E S+ + +VP + YT + KK DTD R T++ A
Sbjct: 160 SVTWSEDATETSEDCTTKQLAVPPENFPYTDKKFVVGCVKKSHDDTDKCRVTVTVAARAS 219
Query: 94 DKEGSKHTMNAEFSVPKNDEKYTISACASDDKGNKSTLCVECPSPSTPGQYDLNHCAECE 153
K+G T+ + N E TI+ S N TL P Y +C E
Sbjct: 220 AKKG--QTVTCAYGTSSNKEPQTITLSPSQ---NAFTLICGTDGEIMPSTYQHQYCDSSE 274
Query: 154 NTTS 157
N T+
Sbjct: 275 NGTN 278
>gi|255944271|ref|XP_002562903.1| Pc20g03520 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587638|emb|CAP85681.1| Pc20g03520 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 712
Score = 37.5 bits (85), Expect = 0.66, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 31 DSRHEKATISLSAHD----KEGSKHTMNAEFSVPK---NDEKYTISSLTKKIESDTDFRR 83
DSRH K T + S HD EG K + N P+ +++Y + +E+ + R+
Sbjct: 99 DSRHLKETKASSTHDTIPGSEGHKRSRNCYELRPRYKTREDRYEYKGPSSAVETQSQSRK 158
Query: 84 EKATISLSAHDKEGSKHTMNAEF 106
+A G +HTMN +F
Sbjct: 159 GRAK------KPRGRRHTMNDDF 175
>gi|325115602|emb|CBZ51157.1| srs domain-containing protein [Neospora caninum Liverpool]
Length = 385
Score = 37.1 bits (84), Expect = 0.73, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 9/112 (8%)
Query: 47 EGSKHTMNAEFSVPKNDEKYT----ISSLTKKIESDTDFRREKATISLSAHDKEGSKHTM 102
E S + + +VP + YT + KK DTD R T++ A K+G T+
Sbjct: 169 EASSDSATQQLTVPPENFPYTDKKFVVGCVKKSHDDTDKCRVTVTVAARASAKKG--QTV 226
Query: 103 NAEFSVPKNDEKYTISACASDDKGNKSTLCVECPSPSTPGQYDLNHCAECEN 154
+ N E TI+ S N TL P Y ++C EN
Sbjct: 227 TCAYGTSSNKEPQTITLSPSQ---NAFTLVCGADGEIVPSTYQQHYCDSSEN 275
>gi|257091202|ref|ZP_05585563.1| predicted protein [Enterococcus faecalis CH188]
gi|257000014|gb|EEU86534.1| predicted protein [Enterococcus faecalis CH188]
gi|315163217|gb|EFU07234.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
gi|315576919|gb|EFU89110.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
Length = 333
Score = 37.1 bits (84), Expect = 0.76, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Query: 22 LTKKIESDTDSRHEKATISLSAHDKEGS----KHTMNAEFSVPKNDEKYTISSLTKKIES 77
L +++ T + T++ + + G+ K N + P ++ + IS
Sbjct: 200 LFANLQNTTATMITDMTVTAEVYKENGTEVLHKTVKNNQSMAPNSNYNFPISW------D 253
Query: 78 DTDFRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISACASDDKGNKS 129
+ F+ K ++ L+A DK G K + N EF + N + Y A D+ NK+
Sbjct: 254 NQAFQPGKYSLKLNASDKAGRKWSFNKEFEIKDNVKNYNEEAVNLKDQSNKN 305
>gi|113460628|ref|YP_718694.1| hypothetical protein HS_0483 [Haemophilus somnus 129PT]
gi|112822671|gb|ABI24760.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 184
Score = 37.1 bits (84), Expect = 0.77, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 1 MNFRIAMLISFLASGCVAHALLTKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVP 60
MN +AML + L S CV+H+ + + HEK+ +SA D E T+ F +P
Sbjct: 1 MNKILAMLTALLLSACVSHSRVNV---PEYIKHHEKSYYLVSAVDLE----TVARYFYLP 53
Query: 61 KNDEKYTISSLTKKIESDTDFRREKATIS 89
K ++T+ + +E D REK ++S
Sbjct: 54 K---EHTVENWQSAVELLHDRNREKRSLS 79
>gi|42518133|ref|NP_964063.1| hypothetical protein LJ0047 [Lactobacillus johnsonii NCC 533]
gi|41582417|gb|AAS08029.1| hypothetical protein LJ_0047 [Lactobacillus johnsonii NCC 533]
Length = 2139
Score = 37.1 bits (84), Expect = 0.94, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 49 SKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRREKATIS-LSAHDKEGSKHTMNAE-- 105
S+ + A FSVPKN+ + +LT I +T+ ++KA ++ +++ DK + N +
Sbjct: 96 SQDSKVASFSVPKNEGTFVEKTLTPNITEETEAMQDKAELAQVNSEDKSAENNKTNVKEE 155
Query: 106 -FSVPKND-EKYTISACASDDKG---NKSTLCVECPSPST 140
+V +N +K + A SD + + +TL V +P+T
Sbjct: 156 SQTVEENQMDKRSAEANISDTENTLVSNTTLNVPKTTPAT 195
>gi|320583771|gb|EFW97984.1| hypothetical protein HPODL_0614 [Pichia angusta DL-1]
Length = 524
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 33 RHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRREKATISLSA 92
RH++ + L ++D+ + + M++EF + + + + S+ +SDT+FR +K L+
Sbjct: 189 RHKRRLLKLVSYDEIPASYEMSSEFIEMEESQAFLLKSVANMRDSDTNFRFKKTHPGLNE 248
Query: 93 HD 94
D
Sbjct: 249 QD 250
>gi|312902224|ref|ZP_07761433.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|310634362|gb|EFQ17645.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
Length = 333
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 22 LTKKIESDTDSRHEKATISLSAHDKEGS----KHTMNAEFSVPKNDEKYTISSLTKKIES 77
L +++ T + T++ + + G K N + P ++ + IS
Sbjct: 200 LFANLQNTTATMITDMTVTAEVYKENGKEVLHKTVKNNQSMAPNSNYNFPISW------D 253
Query: 78 DTDFRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISACASDDKGNKS 129
+ F+ K ++ L+A DK G K + N EF + N + Y A D+ NK+
Sbjct: 254 NQAFQPGKYSLKLNASDKAGRKWSFNKEFEIKDNVKNYNEEAVNLKDQSNKN 305
>gi|114761123|ref|ZP_01441038.1| TonB dependent, hydroxamate-type ferrisiderophore, outer membrane
receptor [Pelagibaca bermudensis HTCC2601]
gi|114545371|gb|EAU48373.1| TonB dependent, hydroxamate-type ferrisiderophore, outer membrane
receptor [Roseovarius sp. HTCC2601]
Length = 689
Score = 35.5 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 28 SDTDSRHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRREKAT 87
SD DS E + SAH + + +++A F K D YT +++D D T
Sbjct: 270 SDDDSEREMLNLGFSAHQEINADWSVDANFRYQKFDWDYT-GFYVNSVDADRD------T 322
Query: 88 ISLSAHDKEGSKHTMNAEFSV 108
IS A+D +T N + +
Sbjct: 323 ISRGANDTSEDSYTQNLDLRL 343
>gi|260778542|ref|ZP_05887434.1| type I secretion target ggxgxdxxx repeat (2 copies) domain protein
[Vibrio coralliilyticus ATCC BAA-450]
gi|260604706|gb|EEX31001.1| type I secretion target ggxgxdxxx repeat (2 copies) domain protein
[Vibrio coralliilyticus ATCC BAA-450]
Length = 5696
Score = 34.8 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 27 ESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRREKA 86
E + D R E +IS D+ G+ A F V ++ ++ +T + + T +
Sbjct: 2579 EGNDDDRPEITSISSPTVDEGGT-----AVFDVTLSNSSELVTLVTMTLANGTAESDDYT 2633
Query: 87 TISLSAHDKEGSKHTMNA-----EFSVPKNDEKYTISACASDD 124
T ++ + +G+ +NA F VP + YT+S +DD
Sbjct: 2634 TNQITVNFADGTSTVVNAVDGEFSFEVPAGNSSYTVSVETTDD 2676
>gi|313240684|emb|CBY33005.1| unnamed protein product [Oikopleura dioica]
Length = 1226
Score = 34.8 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 126 GNKSTLCVECPSPSTPGQYDLNHCAECENTTS 157
GN+ T C++CP+ NHC+ C N T+
Sbjct: 281 GNEKTPCLQCPAGEFQSDIKQNHCSPCTNGTT 312
>gi|123489520|ref|XP_001325408.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121908307|gb|EAY13185.1| hypothetical protein TVAG_097530 [Trichomonas vaginalis G3]
Length = 1463
Score = 34.0 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 47/99 (47%)
Query: 49 SKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRREKATISLSAHDKEGSKHTMNAEFSV 108
+K+T + F +P+N + + T+ I + + +SLS + E + + + ++SV
Sbjct: 683 NKNTADPYFVIPENCKAISFWIKTEHINEKSIKIMSCSALSLSVNSNEATFNFLGQDYSV 742
Query: 109 PKNDEKYTISACASDDKGNKSTLCVECPSPSTPGQYDLN 147
P ++ ++T A N+ + + C S + +Y N
Sbjct: 743 PFSENEWTFIVIAITVVNNRKVMYLTCGSKTYDIKYSQN 781
>gi|239994543|ref|ZP_04715067.1| hypothetical protein AmacA2_08674 [Alteromonas macleodii ATCC
27126]
Length = 999
Score = 34.0 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 18/110 (16%)
Query: 39 ISLSAHDKEGSKHTM-----NAEFSVP--KNDEKYTISSLTKKIESDTDFRREKATISLS 91
+S+ A D G+ T+ N + + P D + S T I TD +T+++
Sbjct: 682 VSVEATDAAGNTTTVVDNSGNIDTTAPALSLDPQTDGSDTTPTISGSTDLP-PGSTVTIV 740
Query: 92 AHDKEGSKHTM------NAEFSV----PKNDEKYTISACASDDKGNKSTL 131
D G+ T+ N +FSV P + +YT+ A A+D+ GN +T+
Sbjct: 741 VTDSAGNTQTIDAVVDENGDFSVDVQTPLTEGEYTVEASATDEAGNTTTV 790
>gi|309389204|gb|ADO77084.1| TonB family protein [Halanaerobium praevalens DSM 2228]
Length = 360
Score = 33.6 bits (75), Expect = 8.2, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 49 SKHTMNAEFSVPKNDEKYTISSLTKKIESDTDFRREKATISLSAHDKEGSKHTMNAEFSV 108
SK AE + KN EK+ + + +KIES+ D + S +A K+ SK N+ S
Sbjct: 171 SKTKAKAE-TKAKNREKFDLDNFLEKIESEKDTENNNQSKSTAAKSKQESKQAANSSNSA 229
Query: 109 PKNDEKYTISA-CASDDKGNKST 130
+ + T A A + NK T
Sbjct: 230 ADSQKTKTARAQTAESSENNKET 252
>gi|156537680|ref|XP_001607892.1| PREDICTED: similar to GA13008-PA [Nasonia vitripennis]
Length = 2337
Score = 33.6 bits (75), Expect = 9.3, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 15/138 (10%)
Query: 23 TKKIESDTDS----RHEKATISLS-AHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIES 77
T K E T+S ++K T+ S DK K T+ +E D YT+ + + ES
Sbjct: 698 TDKNEGSTESYNTYNYDKHTVIYSDTSDKLPVKTTVFSEMDKDSEDMSYTVGPVKAETES 757
Query: 78 DTDFRREKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISACASDDKGNKSTLCVECPS 137
DT T + A +K M+ S D+K + S ST+ ++
Sbjct: 758 DT------PTTNYYATEKSTQPQPMDTVTS----DQKKPVKTEESTVYEASSTVPLKSEE 807
Query: 138 PSTPGQYDLNHCAECENT 155
PST N + ENT
Sbjct: 808 PSTEASVLKNKTVQTENT 825
>gi|332025610|gb|EGI65772.1| Uncharacterized protein C1orf26-like protein [Acromyrmex
echinatior]
Length = 877
Score = 33.6 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 22 LTKKIESDTDSRHEKATISLSAHDKEGSKHTMNAEFSVPKNDEKYTISSLTKKIESDTDF 81
LTK +E ++ + I+ +AHD E N + S +N K S K +
Sbjct: 183 LTKTLEKRDENIGHQEIITRNAHDIEQHNKNQNVQKSCNQNSRKKKGKSFLKTNLAQERM 242
Query: 82 RREKATISLSAHDKEGSKHTMNAEFSVPKNDEK 114
+R + +++ DKE K N + + K+ +K
Sbjct: 243 QRLRTNLNV---DKEKIKEMCNVDLIIKKSPQK 272
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.310 0.124 0.354
Lambda K H
0.267 0.0383 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,808,425,356
Number of Sequences: 14124377
Number of extensions: 101421557
Number of successful extensions: 224359
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 223972
Number of HSP's gapped (non-prelim): 553
length of query: 162
length of database: 4,842,793,630
effective HSP length: 123
effective length of query: 39
effective length of database: 3,105,495,259
effective search space: 121114315101
effective search space used: 121114315101
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 75 (33.6 bits)