HHsearch alignment for GI: 254780760 and conserved domain: COG0068

>COG0068 HypF Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones].
Probab=99.75  E-value=8.5e-17  Score=129.24  Aligned_cols=182  Identities=21%  Similarity=0.270  Sum_probs=130.2

Q ss_pred             CHHHHHHHHHHHHCCCEEEEECCCHHEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHC
Q ss_conf             99999999999975985999077800040279999999999997088810654999679899776420052046899850
Q gi|254780760|r    8 DSNALRKACEFLDAGLPIAIPTETVYGLAVDSRNPTAIRRLYEIKKRPAMNPLICHVSDISMVKKHASVDPLSLHLAKLF   87 (330)
Q Consensus         8 d~~~i~~a~~~L~~G~~v~~PTeTvYGlg~~a~~~~av~~I~~~K~Rp~~~Pli~~v~~~~~~~~~~~~~~~~~~l~~~f   87 (330)
T Consensus       196 ~~~ai~~a~klL~~G~IvAIKGiGGFhLaCda~~~~aV~~LR~rk~Rp~-KPFAvM~kdl~~i~~~a~~~~~E~~lL~S~  274 (750)
T COG0068         196 ANEAIRKAAKLLKVGKIVAIKGIGGFHLACDARNEEAVAKLRKRKNRPL-KPFAVMAKDLETIEEFAEVNDEEEELLTSP  274 (750)
T ss_pred             HHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCC-CCCEEEECCHHHHHHHHCCCHHHHHHHCCC
T ss_conf             3699999999986288799961574455414872689999998518988-883465064887877624567889874586


Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH-HHHHH-HCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf             5887188614678781165554445763322415667-66642-014212123433348543301777766440655421
Q gi|254780760|r   88 WPGPLTLVLDLLSTTDIHPLSTANLKTACFRVPCGFT-KKLIE-TYGHPLAIPSANRSGQISITNVKHILSSSICKEIPL  165 (330)
Q Consensus        88 wPGplT~il~~~~~~~i~~~~t~~~~tvavRiP~h~~-~~ll~-~~~~Piaa~SAN~sG~~Spt~a~~v~~~~~~~~i~~  165 (330)
T Consensus       275 -~rPIV-ll~Kk~~~~~~~~iAP~l~~iGVMLPYtpLhhLLl~~~~~~~~VmTSaNl~g~Pm~~dN~eal-~kL~~IADy  351 (750)
T COG0068         275 -SRPIV-LLKKKKVFLLESNIAPGLHTIGVMLPYTPLHHLLLQESLDIPYVMTSANLPGEPMAIDNEEAL-EKLKGIADY  351 (750)
T ss_pred             -CCCEE-EECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHH-HHHHHHHHE
T ss_conf             -67679-863666666412258999875266227816665433136832998058888998556878999-875412242


Q ss_pred             CCCCC-CCCCCCCCEEEEEECCCCEEEEEC
Q ss_conf             12766-456676730699626982434424
Q gi|254780760|r  166 IIDGG-ISKIGLESTIVNVQCEKKVRILRP  194 (330)
Q Consensus       166 ildgg-~~~~GieSTiid~~~~~~~~IlR~  194 (330)
T Consensus       352 fL~HNR~I~~r~DDSVVrvV~g~-~~~iRr  380 (750)
T COG0068         352 FLLHNREIVNRCDDSVVRVVAGR-IAFIRR  380 (750)
T ss_pred             EEECCHHHCCCCCCCEEEEECCC-EEEEEH
T ss_conf             45326311564687605787794-523404