HHsearch alignment for GI: 254780760 and conserved domain: COG0068
>COG0068 HypF Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones].
Probab=99.75 E-value=8.5e-17 Score=129.24 Aligned_cols=182 Identities=21% Similarity=0.270 Sum_probs=130.2
Q ss_pred CHHHHHHHHHHHHCCCEEEEECCCHHEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHC
Q ss_conf 99999999999975985999077800040279999999999997088810654999679899776420052046899850
Q gi|254780760|r 8 DSNALRKACEFLDAGLPIAIPTETVYGLAVDSRNPTAIRRLYEIKKRPAMNPLICHVSDISMVKKHASVDPLSLHLAKLF 87 (330)
Q Consensus 8 d~~~i~~a~~~L~~G~~v~~PTeTvYGlg~~a~~~~av~~I~~~K~Rp~~~Pli~~v~~~~~~~~~~~~~~~~~~l~~~f 87 (330)
T Consensus 196 ~~~ai~~a~klL~~G~IvAIKGiGGFhLaCda~~~~aV~~LR~rk~Rp~-KPFAvM~kdl~~i~~~a~~~~~E~~lL~S~ 274 (750)
T COG0068 196 ANEAIRKAAKLLKVGKIVAIKGIGGFHLACDARNEEAVAKLRKRKNRPL-KPFAVMAKDLETIEEFAEVNDEEEELLTSP 274 (750)
T ss_pred HHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCC-CCCEEEECCHHHHHHHHCCCHHHHHHHCCC
T ss_conf 3699999999986288799961574455414872689999998518988-883465064887877624567889874586
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH-HHHHH-HCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 5887188614678781165554445763322415667-66642-014212123433348543301777766440655421
Q gi|254780760|r 88 WPGPLTLVLDLLSTTDIHPLSTANLKTACFRVPCGFT-KKLIE-TYGHPLAIPSANRSGQISITNVKHILSSSICKEIPL 165 (330)
Q Consensus 88 wPGplT~il~~~~~~~i~~~~t~~~~tvavRiP~h~~-~~ll~-~~~~Piaa~SAN~sG~~Spt~a~~v~~~~~~~~i~~ 165 (330)
T Consensus 275 -~rPIV-ll~Kk~~~~~~~~iAP~l~~iGVMLPYtpLhhLLl~~~~~~~~VmTSaNl~g~Pm~~dN~eal-~kL~~IADy 351 (750)
T COG0068 275 -SRPIV-LLKKKKVFLLESNIAPGLHTIGVMLPYTPLHHLLLQESLDIPYVMTSANLPGEPMAIDNEEAL-EKLKGIADY 351 (750)
T ss_pred -CCCEE-EECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHH-HHHHHHHHE
T ss_conf -67679-863666666412258999875266227816665433136832998058888998556878999-875412242
Q ss_pred CCCCC-CCCCCCCCEEEEEECCCCEEEEEC
Q ss_conf 12766-456676730699626982434424
Q gi|254780760|r 166 IIDGG-ISKIGLESTIVNVQCEKKVRILRP 194 (330)
Q Consensus 166 ildgg-~~~~GieSTiid~~~~~~~~IlR~ 194 (330)
T Consensus 352 fL~HNR~I~~r~DDSVVrvV~g~-~~~iRr 380 (750)
T COG0068 352 FLLHNREIVNRCDDSVVRVVAGR-IAFIRR 380 (750)
T ss_pred EEECCHHHCCCCCCCEEEEECCC-EEEEEH
T ss_conf 45326311564687605787794-523404