HHSEARCH alignment of GI: 254780760 and SCOP domain: d1k7ja_

Alignment
>d1k7ja_ d.115.1.1 (A:) Hypothetical protein YciO {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=367.55  Aligned_cols=192  Identities=23%  Similarity=0.344  Sum_probs=173.4

Q ss_pred             CCHHHHHHHHHHHHCCCEEEEECCCHHEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHH
Q ss_conf             99999999999997598599907780004027999999999999708881065499967989977642005204689985
Q gi|254780760|r    7 TDSNALRKACEFLDAGLPIAIPTETVYGLAVDSRNPTAIRRLYEIKKRPAMNPLICHVSDISMVKKHASVDPLSLHLAKL   86 (330)
Q Consensus         7 ~d~~~i~~a~~~L~~G~~v~~PTeTvYGlg~~a~~~~av~~I~~~K~Rp~~~Pli~~v~~~~~~~~~~~~~~~~~~l~~~   86 (330)
                      .+.+.|++|+++|++|++|+|||||||||||||+|++||+|||++|+||.+|||+++++|++++..|+.+++.+.+|+++
T Consensus        12 p~~~~i~~a~~~L~~G~vv~~PTdTvYgl~~da~~~~av~~i~~iK~R~~~kpl~vlv~~~~~~~~~~~~~~~~~~l~~~   91 (206)
T d1k7ja_          12 PQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKN   91 (206)
T ss_dssp             CCHHHHHHHHHHHHTTCCEEEEETTEEEEEEETTCHHHHHHHHHHHTCCTTCCCEEECSSHHHHHHHBCCCHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             89999999999997699899977853278880798078999998621101245553257899999886530455553012


Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHCCCEEECCCCCCCCCC-CCCHHHHHHHHHHCCCCC
Q ss_conf             058871886146787811655544457633224156-676664201421212343334854-330177776644065542
Q gi|254780760|r   87 FWPGPLTLVLDLLSTTDIHPLSTANLKTACFRVPCG-FTKKLIETYGHPLAIPSANRSGQI-SITNVKHILSSSICKEIP  164 (330)
Q Consensus        87 fwPGplT~il~~~~~~~i~~~~t~~~~tvavRiP~h-~~~~ll~~~~~Piaa~SAN~sG~~-Spt~a~~v~~~~~~~~i~  164 (330)
                      |||||+|+|++.++. ....+++++.+|||||||+| ++++|++.+|.||++||||+||.+ +++.++++. +.|++.+|
T Consensus        92 ~wPgplT~i~~~~~~-~~~~~~~~~~~tv~iRip~~~~~~~Ll~~~~~Pl~sTSAN~sG~~~~~~~~~~i~-~~~~~~vd  169 (206)
T d1k7ja_          92 NTPGNYTFILKGTKE-VPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIK-DRLEKQVD  169 (206)
T ss_dssp             SCSSSEEEEEEBCTT-SCGGGSCTTTCEEEEECCCSHHHHHHHHHHCSCEEEEECBCTTCSSBCCCHHHHH-HHHTTTCS
T ss_pred             CCCCCEEEEECCCCC-CCCHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHH-HHHCCCCE
T ss_conf             455440255427766-6203330466444444214521289998512764541134443444568799999-98578753


Q ss_pred             CCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHH
Q ss_conf             11276645667673069962698243442488788887
Q gi|254780760|r  165 LIIDGGISKIGLESTIVNVQCEKKVRILRPGGLEIETL  202 (330)
Q Consensus       165 ~ildgg~~~~GieSTiid~~~~~~~~IlR~G~i~~~~i  202 (330)
                      +++|+|.+. |.+|||||++. ++++|+|+|+++.++.
T Consensus       170 ~iid~g~~~-~~pSTIid~~~-~~~~ilR~Ga~~~~~~  205 (206)
T d1k7ja_         170 LIIHGGYLG-QKPTTVIDLTD-DTPVVVREGVGDVKPF  205 (206)
T ss_dssp             EEEECCCCC-SCCCEEEECGG-GCCEEEECCSSCSGGG
T ss_pred             EEEECCCCC-CCCCEEEEEEC-CCEEEEECCCCCCHHH
T ss_conf             999488728-98996899979-9749990489870532


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: YrdC/RibB
superfamily: YrdC/RibB
family: YrdC-like
domain: Hypothetical protein YciO
species: Escherichia coli [TaxId: 562]