RPSBLAST alignment of GI: 254780760 and protein with PDBid: 1hru

>1hru_A YRDC gene product; protein folding, structural genomics, RNA, SUA5, PSI, protein structure initiative, midwest center for structural genomics; 2.00A {Escherichia coli} SCOP: d.115.1.1 Length = 188

 Score =  121 bits (304), Expect = 3e-28
 Identities = 48/187 (25%), Positives = 75/187 (40%), Gaps = 8/187 (4%)

Query: 8   DSNALRKACEFLDAGLPIAIPTETVYGLAVDSRNPTAIRRLYEIKKRPAMNPLICHVSDI 67
             +A+  A + L+    IA PTE V+G+  D  + TA+ RL E+K+RP    LI   ++ 
Sbjct: 6   QRDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLILIAANY 65

Query: 68  SMVKKHASVDPLS---LHLAKLFWPGPLTLVLDLLSTTDIHPLSTANLKTACFRVP-CGF 123
             +K +     L+          WPGP+T V    +T       T    +   RV     
Sbjct: 66  EQLKPYIDDTMLTDVQRETIFSRWPGPVTFVFPAPAT--TPRWLTGRFDSLAVRVTDHPL 123

Query: 124 TKKLIETYGHPLAIPSANRSGQISITNVKHILSSSICKEIPLIIDGGISKIGLESTIVNV 183
              L + YG PL   SAN SG      V  +  +      P++      ++   S I + 
Sbjct: 124 VVALCQAYGKPLVSTSANLSGLPPCRTVDEVR-AQFGAAFPVVPGETGGRLN-PSEIRDA 181

Query: 184 QCEKKVR 190
              +  R
Sbjct: 182 LTGELFR 188