HHsearch alignment for GI: 254780761 and conserved domain: PRK11230
>PRK11230 glycolate oxidase subunit GlcD; Provisional.
Probab=100.00 E-value=0 Score=809.15 Aligned_cols=458 Identities=25% Similarity=0.392 Sum_probs=399.0
Q ss_pred CCCCC-HHHHHHHHHHCCCCCEECCHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf 96789-89999999733844186698998773134013676687589954998999999999987298299975887776
Q gi|254780761|r 1 MNQLS-LDLIQRFISIVGSEGILDDQKLISPYLTEERKIYHGTSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLV 79 (473)
Q Consensus 1 ~~~~~-~~~~~~l~~i~g~~~v~~d~~~~~~~~~d~~~~~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~ 79 (473)
T Consensus 13 ~p~~~~~~ll~~L~~~lg~~~Vl~~~~~l~~y~~D~~~~~~~~P~aVv~P~s~eeV~~iv~~a~~~~ipvvprGggTgL~ 92 (499)
T PRK11230 13 LPDVDRTALLAALREHLPDLEILHTDEDLRPYECDGLSAYRTTPLLVVLPKQMEQVQALLAVCHRLRVPVVARGAGTGLS 92 (499)
T ss_pred CCCCCHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 99789999999999767985188588897651357865566898889940999999999999998799099978983226
Q ss_pred CCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHH
Q ss_conf 54010488866999763002774211237345511442002222100123222344334321113112221235640001
Q gi|254780761|r 80 GGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNAGGTAVL 159 (473)
Q Consensus 80 G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~~G~~s~ 159 (473)
T Consensus 93 Gga~p~~--~gIvl~l~rmn~Ileid~~~~~v~VeaGv~~~~l~~~l~~~Gl~~p~dP~S~~~~tIGG~iAtNAgG~~~~ 170 (499)
T PRK11230 93 GGALPLE--KGVLLVMARFNRILDIDPVGRRARVQPGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNVAENAGGVHCL 170 (499)
T ss_pred CCCCCCC--CEEEEEECCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEE
T ss_conf 5812689--82999800127706882689979994581079999989866985488987233552530773078786303
Q ss_pred HCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 12573334443323466653021122013322322233322346545431012799404675443210000135268999
Q gi|254780761|r 160 SYGNIRHLCLGIEAVLPTGDIWNGMHKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQ 239 (473)
Q Consensus 160 ~yG~~~d~v~~~~vv~~~G~i~~~~~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~ 239 (473)
T Consensus 171 rYG~trd~VlglevVlpdG~v~~~g~-~~~~~~GydL~~LfiGSEGTLGIIT~a~LrL~p~P~~~~~~~~~F~~~~~A~~ 249 (499)
T PRK11230 171 KYGLTVHNLLKVEILTLDGERLTLGS-DALDSPGFDLLALFTGSEGMLGVVTEVTVKLLPKPPVAKVLLASFDSVEKAGR 249 (499)
T ss_pred EECCHHHHHHCCEEEECCCCEECCCC-CCCCCCCCCHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCHHHHHH
T ss_conf 31568997510438936886211588-66788984778753577862389989999987478605899733566999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99751023322222222451799999986144434115753211001113543068999999998888631345653100
Q gi|254780761|r 240 LLQLSQKTAGSMLTAFELISNFILKLVVKHIPNTFSPLSDTSPWYILLEISSTETLERAQNIANTILATGFNKKILTEWI 319 (473)
Q Consensus 240 ~~~~~~~~~~~~~~aiel~d~~~~~~~~~~~~~~~~~~~~~~~~~lli~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (473)
T Consensus 250 av~~i~~-~g~~p~a~El~D~~~~~~~~~~~~~---~~p~~~~a~llve~~g~~~~~--~~~~~~~-~~~l~~~g~~~~~ 322 (499)
T PRK11230 250 AVADIIA-AGIIPGGLEMMDNLAIRAAEDFIHA---GYPVDAEAILLCELDGVESDV--QEDCERV-NDVLLAAGATDVR 322 (499)
T ss_pred HHHHHHH-CCCCCEEEEECCHHHHHHHHHHCCC---CCCCCCCCEEEEECCCCHHHH--HHHHHHH-HHHHHHCCCCEEE
T ss_conf 9999986-6998558753047899999875116---999774310233225887889--9999999-9999876983589
Q ss_pred CCCCHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCC
Q ss_conf 158888964433100122112-2235664444210013128999999999988634872289999844986999984277
Q gi|254780761|r 320 LPSLDEEKNAIWCLRNNIPLA-QKREGRSIKHDISVPIGQIPSFLQEVKKSVSSIFPKTRIGLFGHIGDGNIHFNVFPPT 398 (473)
Q Consensus 320 ~~~~~~~~~~lw~~R~~~~~~-~~~~g~~~~~Dvavp~~~l~~~~~~v~~~l~~~~~~~~~~~~gH~g~g~lh~~~~~~~ 398 (473)
T Consensus 323 ~a~~~~e~~~lW~~R~~~~~~~~~~~~~~~~~Dv~VP~~~l~~~~~~~~~l~~~~--~~~~~~~gH~GDGNlH~~~~~~~ 400 (499)
T PRK11230 323 LAQDEAERVRFWAGRKNAFPAVGRISPDYYCMDGTIPRRELPGVLEGIARLSQQY--GLRVANVFHAGDGNMHPLILFDA 400 (499)
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHC--CCCEEEEEECCCCCEEEEECCCC
T ss_conf 9489999999999999999999965798257654312210899999999999970--99489999758875044422599
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 888068999999999999999999818918997355565688888731789999999998871537778887649
Q gi|254780761|r 399 DENQDEFLSLHWNTINNIVYSVVLSYGGSIAAEHGIGQLHKKRLEGILEPTEIKIMKKIKEIFDPAGIMNPGKFL 473 (473)
Q Consensus 399 ~~~~~~~~~~~~~~i~~~~~~~~~~~gG~is~eHGiG~~k~~~~~~~~~~~~~~~l~~iK~~~DP~gilNPGkli 473 (473)
T Consensus 401 ~~~~~---~~~~~~~~~~v~~~v~~~GGsiS~EHGiG~~k~~~l~~~~~~~~~~lmr~IK~a~DP~gILNPGKvi 472 (499)
T PRK11230 401 NEPGE---LERAEALGGKILELCVEVGGSITGEHGVGREKINQMCAQFNSDEITLFHAVKAAFDPDGLLNPGKNI 472 (499)
T ss_pred CCHHH---HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99799---9999999999999999869779778503134088998860999999999999985977588999356