HHsearch alignment for GI: 254780761 and conserved domain: PRK11230

>PRK11230 glycolate oxidase subunit GlcD; Provisional.
Probab=100.00  E-value=0  Score=809.15  Aligned_cols=458  Identities=25%  Similarity=0.392  Sum_probs=399.0

Q ss_pred             CCCCC-HHHHHHHHHHCCCCCEECCHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             96789-89999999733844186698998773134013676687589954998999999999987298299975887776
Q gi|254780761|r    1 MNQLS-LDLIQRFISIVGSEGILDDQKLISPYLTEERKIYHGTSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLV   79 (473)
Q Consensus         1 ~~~~~-~~~~~~l~~i~g~~~v~~d~~~~~~~~~d~~~~~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~   79 (473)
T Consensus        13 ~p~~~~~~ll~~L~~~lg~~~Vl~~~~~l~~y~~D~~~~~~~~P~aVv~P~s~eeV~~iv~~a~~~~ipvvprGggTgL~   92 (499)
T PRK11230         13 LPDVDRTALLAALREHLPDLEILHTDEDLRPYECDGLSAYRTTPLLVVLPKQMEQVQALLAVCHRLRVPVVARGAGTGLS   92 (499)
T ss_pred             CCCCCHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             99789999999999767985188588897651357865566898889940999999999999998799099978983226


Q ss_pred             CCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHH
Q ss_conf             54010488866999763002774211237345511442002222100123222344334321113112221235640001
Q gi|254780761|r   80 GGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNAGGTAVL  159 (473)
Q Consensus        80 G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~~G~~s~  159 (473)
T Consensus        93 Gga~p~~--~gIvl~l~rmn~Ileid~~~~~v~VeaGv~~~~l~~~l~~~Gl~~p~dP~S~~~~tIGG~iAtNAgG~~~~  170 (499)
T PRK11230         93 GGALPLE--KGVLLVMARFNRILDIDPVGRRARVQPGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNVAENAGGVHCL  170 (499)
T ss_pred             CCCCCCC--CEEEEEECCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEE
T ss_conf             5812689--82999800127706882689979994581079999989866985488987233552530773078786303


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             12573334443323466653021122013322322233322346545431012799404675443210000135268999
Q gi|254780761|r  160 SYGNIRHLCLGIEAVLPTGDIWNGMHKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAVNSLEQALQ  239 (473)
Q Consensus       160 ~yG~~~d~v~~~~vv~~~G~i~~~~~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f~~~~~a~~  239 (473)
T Consensus       171 rYG~trd~VlglevVlpdG~v~~~g~-~~~~~~GydL~~LfiGSEGTLGIIT~a~LrL~p~P~~~~~~~~~F~~~~~A~~  249 (499)
T PRK11230        171 KYGLTVHNLLKVEILTLDGERLTLGS-DALDSPGFDLLALFTGSEGMLGVVTEVTVKLLPKPPVAKVLLASFDSVEKAGR  249 (499)
T ss_pred             EECCHHHHHHCCEEEECCCCEECCCC-CCCCCCCCCHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCHHHHHH
T ss_conf             31568997510438936886211588-66788984778753577862389989999987478605899733566999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99751023322222222451799999986144434115753211001113543068999999998888631345653100
Q gi|254780761|r  240 LLQLSQKTAGSMLTAFELISNFILKLVVKHIPNTFSPLSDTSPWYILLEISSTETLERAQNIANTILATGFNKKILTEWI  319 (473)
Q Consensus       240 ~~~~~~~~~~~~~~aiel~d~~~~~~~~~~~~~~~~~~~~~~~~~lli~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (473)
T Consensus       250 av~~i~~-~g~~p~a~El~D~~~~~~~~~~~~~---~~p~~~~a~llve~~g~~~~~--~~~~~~~-~~~l~~~g~~~~~  322 (499)
T PRK11230        250 AVADIIA-AGIIPGGLEMMDNLAIRAAEDFIHA---GYPVDAEAILLCELDGVESDV--QEDCERV-NDVLLAAGATDVR  322 (499)
T ss_pred             HHHHHHH-CCCCCEEEEECCHHHHHHHHHHCCC---CCCCCCCCEEEEECCCCHHHH--HHHHHHH-HHHHHHCCCCEEE
T ss_conf             9999986-6998558753047899999875116---999774310233225887889--9999999-9999876983589


Q ss_pred             CCCCHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCC
Q ss_conf             158888964433100122112-2235664444210013128999999999988634872289999844986999984277
Q gi|254780761|r  320 LPSLDEEKNAIWCLRNNIPLA-QKREGRSIKHDISVPIGQIPSFLQEVKKSVSSIFPKTRIGLFGHIGDGNIHFNVFPPT  398 (473)
Q Consensus       320 ~~~~~~~~~~lw~~R~~~~~~-~~~~g~~~~~Dvavp~~~l~~~~~~v~~~l~~~~~~~~~~~~gH~g~g~lh~~~~~~~  398 (473)
T Consensus       323 ~a~~~~e~~~lW~~R~~~~~~~~~~~~~~~~~Dv~VP~~~l~~~~~~~~~l~~~~--~~~~~~~gH~GDGNlH~~~~~~~  400 (499)
T PRK11230        323 LAQDEAERVRFWAGRKNAFPAVGRISPDYYCMDGTIPRRELPGVLEGIARLSQQY--GLRVANVFHAGDGNMHPLILFDA  400 (499)
T ss_pred             EECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHC--CCCEEEEEECCCCCEEEEECCCC
T ss_conf             9489999999999999999999965798257654312210899999999999970--99489999758875044422599


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             888068999999999999999999818918997355565688888731789999999998871537778887649
Q gi|254780761|r  399 DENQDEFLSLHWNTINNIVYSVVLSYGGSIAAEHGIGQLHKKRLEGILEPTEIKIMKKIKEIFDPAGIMNPGKFL  473 (473)
Q Consensus       399 ~~~~~~~~~~~~~~i~~~~~~~~~~~gG~is~eHGiG~~k~~~~~~~~~~~~~~~l~~iK~~~DP~gilNPGkli  473 (473)
T Consensus       401 ~~~~~---~~~~~~~~~~v~~~v~~~GGsiS~EHGiG~~k~~~l~~~~~~~~~~lmr~IK~a~DP~gILNPGKvi  472 (499)
T PRK11230        401 NEPGE---LERAEALGGKILELCVEVGGSITGEHGVGREKINQMCAQFNSDEITLFHAVKAAFDPDGLLNPGKNI  472 (499)
T ss_pred             CCHHH---HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             99799---9999999999999999869779778503134088998860999999999999985977588999356