HHsearch alignment for GI: 254780761 and conserved domain: PRK11282

>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional.
Probab=100.00  E-value=0  Score=508.15  Aligned_cols=345  Identities=20%  Similarity=0.284  Sum_probs=250.2

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCC
Q ss_conf             99899999999998729829997588777654010488866999763002774211237345511442002222100123
Q gi|254780761|r   50 SCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFNVQKIAEKN  129 (473)
Q Consensus        50 ~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~l~~~l~~~  129 (473)
T Consensus         2 ~~taev~e~Vr~A~~~~~pv~p~G~gT~~~~G~~~----~g~vl~l~rm~~I~~~~~~d~~v~VeaGv~~~~L~~~la~~   77 (351)
T PRK11282          2 DISAALLERVRQAAADGTPLRIRGGGSKAFYGRAL----AGEVLDTRAHRGIVSYDPTELVITARAGTPLAELEAALAEA   77 (351)
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC----CCEEEECCCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHC
T ss_conf             61899999999999879928998999788878899----98598852468717985888979995898199999999970


Q ss_pred             CCCCCCCCCCC-CCCCCHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             22234433432-11131122212356400011257333444332346665302112201332232223332234654543
Q gi|254780761|r  130 HRLFPLSLPSE-KYCHIGGNLATNAGGTAVLSYGNIRHLCLGIEAVLPTGDIWNGMHKLIKDNSRYDIRDLLIGSEGTLG  208 (473)
Q Consensus       130 g~~~p~~p~s~-~~aTvGG~ia~~~~G~~s~~yG~~~d~v~~~~vv~~~G~i~~~~~~~~~~~~G~dl~~l~~GseGtlG  208 (473)
T Consensus        78 G~~l~~dPp~~~~~aTIGG~vAtNagG~r~~rYG~tRD~VLGl~vVl~dG~vi~~Gg~~~KnvaGYDL~~L~vGSEGTLG  157 (351)
T PRK11282         78 GQMLPFEPPHFGGGATVGGMVAAGLSGPRRPWAGAVRDFVLGTRLINGRGEHLRFGGQVMKNVAGYDVSRLMAGSLGTLG  157 (351)
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHEEEEEEECCCCEEEEECCEECCCCCCCCHHHHHCCCCCCCE
T ss_conf             88224588777875434778882799742013588888375469987895699608802467877587787455875001


Q ss_pred             CEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCC
Q ss_conf             10127994046754432100001352689999975102332222222245179999998614443411575321100111
Q gi|254780761|r  209 IITGAVLRLLPYRTGKQVAFIAVNSLEQALQLLQLSQKTAGSMLTAFELISNFILKLVVKHIPNTFSPLSDTSPWYILLE  288 (473)
Q Consensus       209 iITevtlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~~~~~~aiel~d~~~~~~~~~~~~~~~~~~~~~~~~~lli~  288 (473)
T Consensus       158 vITeatLrL~P~P~~~~t~~~~~~~-~~A~~~~~~~~~~-~lp~~~~~--------------------~~---~~~l~v~  212 (351)
T PRK11282        158 VLLEVSLKVLPRPRAELTLRLEMDA-AEALRKLNEWGGQ-PLPISASC--------------------WD---GGTLHLR  212 (351)
T ss_pred             EEEEEEEEECCCCCCCEEEEECCCH-HHHHHHHHHHHCC-CCCCCHHH--------------------CC---CCEEEEE
T ss_conf             2258899974788641689850798-9999999998468-99863100--------------------46---8735898


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             354306899999999888863134565310015888896443310-0122112223566444421001312899999999
Q gi|254780761|r  289 ISSTETLERAQNIANTILATGFNKKILTEWILPSLDEEKNAIWCL-RNNIPLAQKREGRSIKHDISVPIGQIPSFLQEVK  367 (473)
Q Consensus       289 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~-R~~~~~~~~~~g~~~~~Dvavp~~~l~~~~~~v~  367 (473)
T Consensus       213 ~~g~~~av~--~a~~~l-----~g~---------~~~~~~~~W~~~r~~~~~~~~~-~~~l-~r~~vp~~~~~~~l----  270 (351)
T PRK11282        213 LSGAEGAVK--AARERL-----GGE---------ELAEAEAFWQGLREQTLPFFAD-GRPL-WRLSLPSAAPPLDL----  270 (351)
T ss_pred             ECCCHHHHH--HHHHHH-----CCC---------CHHHHHHHHHHHHHHHHHHHCC-CCCE-EEEECCCCCCCCCC----
T ss_conf             158789999--999985-----553---------2011366899988742443137-8851-57851664442338----


Q ss_pred             HHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCC
Q ss_conf             99886348722899998449869999842778880689999999999999999998189189973555656888887317
Q gi|254780761|r  368 KSVSSIFPKTRIGLFGHIGDGNIHFNVFPPTDENQDEFLSLHWNTINNIVYSVVLSYGGSIAAEHGIGQLHKKRLEGILE  447 (473)
Q Consensus       368 ~~l~~~~~~~~~~~~gH~g~g~lh~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gG~is~eHGiG~~k~~~~~~~~~  447 (473)
T Consensus       271 -------~~~~~---~~~g~~~~~~-----~~-----------~~~~~~i~~~a~~~gG~~t~~~g~~~~~~~~~--~l~  322 (351)
T PRK11282        271 -------PGEQL---IDWGGAQRWL-----KS-----------DADAAAIRAAAAAAGGHATLFRAGDRSDGVFH--PLP  322 (351)
T ss_pred             -------CCCEE---EECCCCHHHH-----CC-----------CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCC--CCC
T ss_conf             -------70016---7448852021-----25-----------56899999999984987999977764556567--799


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             89999999998871537778887649
Q gi|254780761|r  448 PTEIKIMKKIKEIFDPAGIMNPGKFL  473 (473)
Q Consensus       448 ~~~~~~l~~iK~~~DP~gilNPGkli  473 (473)
T Consensus       323 ~~~~~lmr~IK~afDP~giLNPGKlf  348 (351)
T PRK11282        323 APLLRIHRRLKQAFDPAGIFNPGRLY  348 (351)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             99999999889851987788874037