HHsearch results for GI: 254780761 and protein with PDBid: 1ffv_C

>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=97.92  E-value=3.5e-05  Score=50.49  Aligned_cols=154  Identities=14%  Similarity=0.150  Sum_probs=91.3

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHH
Q ss_conf             87589954998999999999987298299975887776540104888669997630027742112373455114420022
Q gi|254780761|r   42 TSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFN  121 (473)
Q Consensus        42 ~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~  121 (473)
                      .|.-..+|.|.+|..++++-.+.   ...+.+|||.+.-..-........+||++++...-.|..++..+++++++++.+
T Consensus         4 ~~F~y~~P~sl~Ea~~ll~~~~~---~a~~laGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~I~~~~~~l~IGA~~t~~~   80 (287)
T 1ffv_C            4 PRFEYHAPKSVGEAVALLGQLGS---DAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVEND   80 (287)
T ss_dssp             CCCEEECCSSHHHHHHHHHHHGG---GEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETTEEEEETTCBHHH
T ss_pred             CCCCEECCCCHHHHHHHHHHHCC---CCEEEEECCCHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCEEECCCCHHHHH
T ss_conf             99616798999999999885199---988997065089997347678886998877667766998595476162144999


Q ss_pred             HHHHC--CCCC-------CCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCC-----CCCCCCCCCCCCCEEEEEEC
Q ss_conf             22100--1232-------2234433432111311222123564000112573334-----44332346665302112201
Q gi|254780761|r  122 VQKIA--EKNH-------RLFPLSLPSEKYCHIGGNLATNAGGTAVLSYGNIRHL-----CLGIEAVLPTGDIWNGMHKL  187 (473)
Q Consensus       122 l~~~l--~~~g-------~~~p~~p~s~~~aTvGG~ia~~~~G~~s~~yG~~~d~-----v~~~~vv~~~G~i~~~~~~~  187 (473)
                      +.+.-  ..+-       ..+ -+|+-...+||||+|++.+..         .|+     .++.++++.+++-.   +.+
T Consensus        81 l~~~~~~~~~~p~L~~a~~~i-a~~qIRN~aTiGGNi~~a~p~---------~D~~~~Llal~A~v~l~s~~g~---R~v  147 (287)
T 1ffv_C           81 LISSPIVQARLPLLAEAAKLI-ADPQVRNRGTIGGDIAHGDPG---------NDHPALSIAVEAHFVLEGPNGR---RTV  147 (287)
T ss_dssp             HHHCHHHHHHCHHHHHHGGGS-SCTTGGGTCBHHHHHHTCCTT---------CSHHHHHHHTTCEEEEEETTEE---EEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHC-CCHHEEEEEEECCCCEECCCC---------CCHHHHHHHHHHHEEEEECCCC---EEE
T ss_conf             865467788879999998622-872047641405720346876---------4257799885201178624772---798


Q ss_pred             CCCCCCCCCCCCCCCCCCC----CCCEEEEEEEEC
Q ss_conf             3322322233322346545----431012799404
Q gi|254780761|r  188 IKDNSRYDIRDLLIGSEGT----LGIITGAVLRLL  218 (473)
Q Consensus       188 ~~~~~G~dl~~l~~GseGt----lGiITevtlrl~  218 (473)
                             .+.++|.|..-|    --+||++.+...
T Consensus       148 -------~~~df~~g~~~t~l~~~Eil~~I~iP~~  175 (287)
T 1ffv_C          148 -------PADGFFLGTYMTLLEENEVMVEIRVPAF  175 (287)
T ss_dssp             -------ESTTTEEETTEESCCTTCEEEEEEEECC
T ss_pred             -------EHHHHCCCCCCCCCCCCCEEEEEEECCC
T ss_conf             -------8788254643532578866999993157