HHsearch results for GI: 254780761 and protein with PDBid: 1n62_C
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, copper, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans OM5} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.61 E-value=9e-05 Score=47.96 Aligned_cols=108 Identities=15% Similarity=0.140 Sum_probs=70.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHH
Q ss_conf 87589954998999999999987298299975887776540104888669997630027742112373455114420022
Q gi|254780761|r 42 TSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRKNRKDIILSIKRMNRIRDIDLRSNTIAVDAGINLFN 121 (473)
Q Consensus 42 ~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~~~~~vvld~~~mn~il~id~~~~~v~veaGv~~~~ 121 (473)
.|.-..+|.|.+|..++++-.+.. ..+.+|||.+....-........+||++++.....|..++..+++++++++.+
T Consensus 4 ~~F~y~~P~tl~Ea~~ll~~~~~~---a~~laGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~I~~~~~~l~iGa~vt~~~ 80 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKLGED---ARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHA 80 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHHGGG---EEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHH
T ss_pred CCCCEECCCCHHHHHHHHHHHCCC---CEEEEECCHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCEEEECCCCHHHH
T ss_conf 986366989999999999851999---88999454799998558899996998988757663887486799812654999
Q ss_pred HHHH--CCCCC-------CCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 2210--01232-------22344334321113112221235
Q gi|254780761|r 122 VQKI--AEKNH-------RLFPLSLPSEKYCHIGGNLATNA 153 (473)
Q Consensus 122 l~~~--l~~~g-------~~~p~~p~s~~~aTvGG~ia~~~ 153 (473)
+.+. +..+. ..+ -+|+=...+||||+|++.+
T Consensus 81 l~~~~~~~~~~p~l~~a~~~i-a~~qIRN~aTiGGNi~~a~ 120 (288)
T 1n62_C 81 LIGSDFLAAKLPIIRETSLLI-ADPQIRYMGTIGGNAANGD 120 (288)
T ss_dssp HHHCHHHHHHCHHHHHHHTTS-SCHHHHHHCBHHHHHHSCC
T ss_pred HHCCHHHHHHCHHHHHHHHHC-CCHHHCCCEEECCCCCCCC
T ss_conf 861645543565999998711-8997801002357222557