HHsearch results for GI: 254780761 and protein with PDBid: 3js8_A
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=100.00 E-value=0 Score=310.59 Aligned_cols=197 Identities=18% Similarity=0.162 Sum_probs=166.3
Q ss_pred HHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECC--CCCEEEEECCCCCCCCCCCCC
Q ss_conf 731340136766875899549989999999999872982999758877765401048--886699976300277421123
Q gi|254780761|r 30 PYLTEERKIYHGTSPLVLLPSCTHEVSQILKLATETNTSITPQGGNTGLVGGQIPRK--NRKDIILSIKRMNRIRDIDLR 107 (473)
Q Consensus 30 ~~~~d~~~~~~~~p~~Vv~P~~~~ev~~iv~~a~~~~i~v~prGggt~~~G~~~p~~--~~~~vvld~~~mn~il~id~~ 107 (473)
.|+ .|.+.++..|.+|++|+|++||+++|++|.+++++|++||+|+|..|++.+.. ...+|+|||++||+|++||++
T Consensus 18 ~~~-~w~~~~~~~p~~v~~P~s~~dV~~~v~~A~~~~~~v~~rg~GHs~~g~~~~~g~~~~~~ivId~~~l~~i~~id~~ 96 (540)
T 3js8_A 18 SFK-NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAMSIDAS 96 (540)
T ss_dssp EEE-CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCEEEECS
T ss_pred HHC-CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCEEECCC
T ss_conf 203-3357855788989946999999999999998898099988996766576478767787699992437883587066
Q ss_pred CC--EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCH----------HHHCCCCCCCCCCCCCCC
Q ss_conf 73--455114420022221001232223443343211131122212356400----------011257333444332346
Q gi|254780761|r 108 SN--TIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNAGGTA----------VLSYGNIRHLCLGIEAVL 175 (473)
Q Consensus 108 ~~--~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~~G~~----------s~~yG~~~d~v~~~~vv~ 175 (473)
+. +||||||++|.+|+++|+++|+.+|+.|. ...+||||+++++++|.. |.+||.+.|+|+++|||+
T Consensus 97 ~~~~~Vtv~aG~~~~~l~~~L~~~Gl~~~~~~~-~~~~tvgG~~~~~~~g~g~~~gGG~g~~s~~~G~~~d~V~~~~vVl 175 (540)
T 3js8_A 97 GPVAKVTAQAGITMEALLTGLEKAGLGVTAAPA-PGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVV 175 (540)
T ss_dssp SSSEEEEEETTSBHHHHHHHHHHTTEECSCCCS-CSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEE
T ss_pred CCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC-CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCEEEEEEEE
T ss_conf 790799989998999999999982897666788-7975437861786774566589877655466364636188899996
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
Q ss_conf 66530211220133223222333223465454310127994046754432100001
Q gi|254780761|r 176 PTGDIWNGMHKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPYRTGKQVAFIAV 231 (473)
Q Consensus 176 ~~G~i~~~~~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~p~~~~~~~~~f 231 (473)
+||++.+.. ......+|+.....|+.|.+||||++||+++|.++.+....+.+
T Consensus 176 adG~~~~~~---~~~~~~~~~~~~~~g~~g~~GiVt~~tl~~~p~~~~~~~~~~~~ 228 (540)
T 3js8_A 176 YDKASGAYA---LRKFARNDPQIAPLLAHVGRSLIVEATLQAAPNQRLRCQSWFNI 228 (540)
T ss_dssp EETTTTEEE---EEEEETTSGGGHHHHTCTTSSCEEEEEEEEEECCEEEEEEECCS
T ss_pred CCCCEEEEE---ECCCCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEEECC
T ss_conf 179720687---45777867789865315532035789999873730689877415