HHSEARCH alignment of GI: 254780761 and SCOP domain: d1w1oa2

Alignment
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]}
Probab=100.00  E-value=0  Score=307.33  Aligned_cols=195  Identities=17%  Similarity=0.229  Sum_probs=178.9

Q ss_pred             CCCCEECCHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHC---CCCEEEECCCCCCCCCCEECCCCCEEEE
Q ss_conf             8441866989987731340136766875899549989999999999872---9829997588777654010488866999
Q gi|254780761|r   17 GSEGILDDQKLISPYLTEERKIYHGTSPLVLLPSCTHEVSQILKLATET---NTSITPQGGNTGLVGGQIPRKNRKDIIL   93 (473)
Q Consensus        17 g~~~v~~d~~~~~~~~~d~~~~~~~~p~~Vv~P~~~~ev~~iv~~a~~~---~i~v~prGggt~~~G~~~p~~~~~~vvl   93 (473)
                      .+..|.||+..+.+|++|+.++++..|.+|++|+|++||+++|++|+++   ++||.+||+|+|..|++..   .++|+|
T Consensus         4 ~~g~v~td~~~~~~~~~d~~~~~~~~P~~Vv~P~s~~ev~~iv~~a~~~~~~~~~v~~rggGhs~~g~s~~---~~~ivi   80 (206)
T d1w1oa2           4 LDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFA---PGGVVV   80 (206)
T ss_dssp             TTTCEECSHHHHHHTSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTCC---TTSEEE
T ss_pred             CCCEEECCHHHHHHHEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC---CCCEEE
T ss_conf             79679829888556378745672569999997698999999999998578998479998999784657404---797733


Q ss_pred             ECCCCCCC-----CCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCC
Q ss_conf             76300277-----4211237345511442002222100123222344334321113112221235640001125733344
Q gi|254780761|r   94 SIKRMNRI-----RDIDLRSNTIAVDAGINLFNVQKIAEKNHRLFPLSLPSEKYCHIGGNLATNAGGTAVLSYGNIRHLC  168 (473)
Q Consensus        94 d~~~mn~i-----l~id~~~~~v~veaGv~~~~l~~~l~~~g~~~p~~p~s~~~aTvGG~ia~~~~G~~s~~yG~~~d~v  168 (473)
                      ||++||+|     +++|++..+++||||++|.+|+++|+++|+.+| .+++...+||||+++++++|..+.+||...|+|
T Consensus        81 dl~~l~~i~~~~~~~id~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~-~~~~~~~~tvGG~i~~~g~g~~s~~~G~~~d~v  159 (206)
T d1w1oa2          81 NMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPR-SWTDYLYLTVGGTLSNAGISGQAFRHGPQISNV  159 (206)
T ss_dssp             EGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEES-CCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSE
T ss_pred             ECCCCCEEEECEEEEEECCCCEEEEECCEEHHHHHHHHHCCCCCCC-CCCCCCCEEEEEEECCCCCEECCCCCCCEEEEE
T ss_conf             1023432320214788348978999713462443323321332244-578568347764310234101133445403113


Q ss_pred             CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf             4332346665302112201332232223332234654543101279940467
Q gi|254780761|r  169 LGIEAVLPTGDIWNGMHKLIKDNSRYDIRDLLIGSEGTLGIITGAVLRLLPY  220 (473)
Q Consensus       169 ~~~~vv~~~G~i~~~~~~~~~~~~G~dl~~l~~GseGtlGiITevtlrl~p~  220 (473)
                      +++|+|+|+|+++++..     ..+|||.+++.||+|+|||||++||||+|.
T Consensus       160 ~~~evV~~~G~~~~~s~-----~~~~dl~~a~~g~~G~~Giit~~tl~l~PA  206 (206)
T d1w1oa2         160 LEMDVITGHGEMVTCSK-----QLNADLFDAVLGGLGQFGVITRARIAVEPA  206 (206)
T ss_dssp             EEEEEEETTSCEEEEES-----SSSHHHHHHHTTCTTCSEEEEEEEEEEEEC
T ss_pred             EEEEEECCCCCEEEECC-----CCCHHHHHHHHHCCCCCEEEEEEEEEEECC
T ss_conf             47899948995999889-----899789978863788028579999999859


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: FAD-binding/transporter-associated domain-like
superfamily: FAD-binding/transporter-associated domain-like
family: FAD-linked oxidases, N-terminal domain
domain: Cytokinin dehydrogenase 1
species: Maize (Zea mays) [TaxId: 4577]