HHSEARCH alignment of GI: 254780761 and SCOP domain: d1wvfa1

Alignment
>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}
Probab=100.00  E-value=5.4e-32  Score=217.38  Aligned_cols=237  Identities=10%  Similarity=0.059  Sum_probs=157.2

Q ss_pred             CCCCCCCCCHHH---HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC----CC-----------CCCCCEEC
Q ss_conf             210000135268---9999975102332222222245179999998614443411----57-----------53211001
Q gi|254780761|r  225 QVAFIAVNSLEQ---ALQLLQLSQKTAGSMLTAFELISNFILKLVVKHIPNTFSP----LS-----------DTSPWYIL  286 (473)
Q Consensus       225 ~~~~~~f~~~~~---a~~~~~~~~~~~~~~~~aiel~d~~~~~~~~~~~~~~~~~----~~-----------~~~~~~ll  286 (473)
                      +++++.|++.++   ++++++.+. .++..|+++|++|...+..+....+.....    ++           +...|.+.
T Consensus         4 ~~~~v~f~~~~Dl~~aV~~lr~L~-~~gi~p~~~e~~d~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~w~l~   82 (279)
T d1wvfa1           4 KPFEVIFEDEADIVEIVDALRPLR-MSNTIPNSVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLY   82 (279)
T ss_dssp             EEEEEEECCGGGHHHHHHHHHHHH-HTTSSCSCEEEEEHHHHHHHTTCCGGGTCCCSSSCCHHHHHHHHHHHCCCSEEEE
T ss_pred             EEEEEEECCHHHHHHHHHHHHHHH-HCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf             799999469999999999999999-8599862257358899999874035666667788988999999987288741689


Q ss_pred             CCCCCCCHHHH-HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC---------C-CCCCCCCC--CCCC
Q ss_conf             11354306899-9999998888631345653100158888964433100122112---------2-23566444--4210
Q gi|254780761|r  287 LEISSTETLER-AQNIANTILATGFNKKILTEWILPSLDEEKNAIWCLRNNIPLA---------Q-KREGRSIK--HDIS  353 (473)
Q Consensus       287 i~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~R~~~~~~---------~-~~~g~~~~--~Dva  353 (473)
                      ++++|.+.... ..+....+...   .. ..+........+...+|..|+.....         . +..+..++  .++.
T Consensus        83 ~~l~G~~~~v~~~~~~i~~i~~~---~~-~~~~~~a~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp  158 (279)
T d1wvfa1          83 AALYGTQEQVDVNWKIVTDVFKK---LG-KGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSE  158 (279)
T ss_dssp             EEEEESHHHHHHHHHHHHHHHHH---HT-CCEEEEHHHHTTCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEECBEEE
T ss_pred             EEEECCHHHHHHHHHHHHHHHHH---CC-CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
T ss_conf             98623999999999999999997---79-966895799888999999998400114566656752378998632643644


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf             01312899999999998863487228999984498699998427788806899999999999999999981891899735
Q gi|254780761|r  354 VPIGQIPSFLQEVKKSVSSIFPKTRIGLFGHIGDGNIHFNVFPPTDENQDEFLSLHWNTINNIVYSVVLSYGGSIAAEHG  433 (473)
Q Consensus       354 vp~~~l~~~~~~v~~~l~~~~~~~~~~~~gH~g~g~lh~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gG~is~eHG  433 (473)
                      +|+++++++++.+++.++++  +..+..|+|+||||+|+++....+...++.. .++..+.+.+.+.++++||   +|||
T Consensus       159 ~~~s~l~~~~~~~~~~~~~~--g~~~~~~~H~gdgnlh~~v~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~Gg---~eHG  232 (279)
T d1wvfa1         159 ARGSECKKQAAMAKRVLHKY--GLDYVAEFIVAPRDMHHVIDVLYDRTNPEET-KRADACFNELLDEFEKEGY---AVYR  232 (279)
T ss_dssp             SCHHHHHHHHHHHHHHHHHT--TCCCCEEEEECSSEEEEEEEEEEETTCHHHH-HHHHHHHHHHHHHHHHTTC---CBSC
T ss_pred             CCHHHHHHHHHHHHHHHHHH--CCCEEEEEECCCCEEEEEEECCCCCCCHHHH-HHHHHHHHHHHHHHHHHCC---CCCC
T ss_conf             87999999999999999980--9975899961786489975013578998999-9999999999999998099---7887


Q ss_pred             CCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             556568888873178999999999887153777888764
Q gi|254780761|r  434 IGQLHKKRLEGILEPTEIKIMKKIKEIFDPAGIMNPGKF  472 (473)
Q Consensus       434 iG~~k~~~~~~~~~~~~~~~l~~iK~~~DP~gilNPGkl  472 (473)
                      ||+.|++|+..++++..+++|++||++|||+|||||||.
T Consensus       233 iG~~~~~~l~~~~g~~~~~lm~~iK~alDP~~IlNPGK~  271 (279)
T d1wvfa1         233 VNTRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAPGRS  271 (279)
T ss_dssp             CCGGGHHHHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGG
T ss_pred             CCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             748799999997298999999999998198867798978


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Vanillyl-alcohol oxidase-like
domain: Flavoprotein subunit of p-cresol methylhydroxylase
species: Pseudomonas putida [TaxId: 303]