HHsearch alignment for GI: 254780762 and conserved domain: PRK00116
>PRK00116 ruvA Holliday junction DNA helicase RuvA; Reviewed.
Probab=96.56 E-value=0.0017 Score=44.96 Aligned_cols=33 Identities=33% Similarity=0.657 Sum_probs=24.4
Q ss_pred CCCHHHHHHH-----HHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 6866799999-----99975689995379999999971
Q gi|254780762|r 5 ITGKEIENLI-----KILARIPGFGPRSARRATLHLVK 37 (201)
Q Consensus 5 ~~~~~l~~LI-----~~l~kLPGIG~KsA~R~a~~Ll~ 37 (201)
T Consensus 93 ~~~~~l~~aI~~~D~~~L~~vpGIG~KtA~rIi~ELk~ 130 (198)
T PRK00116 93 LSPEELAQAIANGDIKALTKVPGVGKKTAERIVLELKD 130 (198)
T ss_pred CCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999998589999706889788999999999998