HHsearch alignment for GI: 254780762 and conserved domain: PRK08351

>PRK08351 DNA-directed RNA polymerase subunit E''; Validated.
Probab=92.16  E-value=0.21  Score=30.86  Aligned_cols=52  Identities=23%  Similarity=0.436  Sum_probs=38.4

Q ss_pred             CCCCCCCCCCCCCCCCCCC--CCCCCCCEEEEEECHHHHHHHHHHCC-EEEEEEE
Q ss_conf             8288999733456541003--55556736999835889999975174-0134210
Q gi|254780762|r   58 CLCSICGNVDTTDPCAICI--DQQRDASVIIVVEDVADLWALERSKA-VNALYHV  109 (201)
Q Consensus        58 ~~C~~C~~l~~~~~C~iC~--d~~Rd~~~lCVVE~~~Di~~IE~t~~-y~G~YhV  109 (201)
T Consensus         4 kACr~C~~i~~~~~CP~Cgs~~~s~dW~G~viI~dPe~SeIAk~lgi~~pG~YAl   58 (61)
T PRK08351          4 KACRHCHYITTEDRCPVCGSRDLSEEWFDLVIIIDVENSEIAKKIGAKVPGKYAI   58 (61)
T ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEE
T ss_conf             5465577626899589997986887734599996841618999849998864888