HHsearch alignment for GI: 254780762 and conserved domain: PRK09031
>PRK09031 DNA topoisomerase III; Provisional.
Probab=90.08 E-value=1.9 Score=24.40 Aligned_cols=52 Identities=21% Similarity=0.209 Sum_probs=36.3
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHCCC---CCEEEEEECCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 85549999469978689999999982017---9808874146748820666347999999830
Q gi|254780762|r 138 KIRELIFAISATIEGQTTAHYIMDKLKGI---DVKITRLAYGIPMGSELDYLDDGTIFEAIRS 197 (201)
Q Consensus 138 ~i~EVIlA~~~t~EGe~Ta~yi~~~lk~~---~ikitrla~GiP~G~~ley~D~~TL~~Al~~ 197 (201)
T Consensus 94 ~ad~ii~AtD~DREGElI~~eil~~~~~~~~~~~~v~R~~~--------s~lt~~aI~~A~~~ 148 (649)
T PRK09031 94 QADELVHAGDPDREGQLLVDEVLDYLGLSAEKRQQVQRCLI--------SDLNPQAVKRALDR 148 (649)
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEE--------CCCCHHHHHHHHHC
T ss_conf 29999988688712169999999985734236786589995--------25889999999971