HHsearch alignment for GI: 254780762 and conserved domain: cd00056

>cd00056 ENDO3c endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases.
Probab=93.32  E-value=0.072  Score=34.01  Aligned_cols=31  Identities=19%  Similarity=0.297  Sum_probs=26.5

Q ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
Q ss_conf             7999999997568999537999999997199
Q gi|254780762|r    9 EIENLIKILARIPGFGPRSARRATLHLVKKK   39 (201)
Q Consensus         9 ~l~~LI~~l~kLPGIG~KsA~R~a~~Ll~~~   39 (201)
T Consensus        77 ~~~~~~~~L~~l~GIG~~TA~~vl~~~~~~~  107 (158)
T cd00056          77 DDPDAREELLALPGVGRKTANVVLLFALGPD  107 (158)
T ss_pred             CCHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
T ss_conf             9888999987589828999999999987998