HHsearch alignment for GI: 254780762 and conserved domain: pfam00633

>pfam00633 HHH Helix-hairpin-helix motif. The helix-hairpin-helix DNA-binding motif is found to be duplicated in the central domain of RuvA. The HhH domain of DisA, a bacterial checkpoint control protein, is a DNA-binding domain.

Probab=93.13  E-value=0.05  Score=35.05  Aligned_cols=22  Identities=27%  Similarity=0.446  Sum_probs=18.1

Q ss_pred             HHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             9999997568999537999999
Q gi|254780762|r   12 NLIKILARIPGFGPRSARRATL   33 (201)
Q Consensus        12 ~LI~~l~kLPGIG~KsA~R~a~   33 (201)
T Consensus         8 as~eeL~~lpGVG~~tA~~I~~   29 (30)
T pfam00633         8 ASREELLALPGVGPKTAEAILS   29 (30)
T ss_pred             CCHHHHHHCCCCCHHHHHHHHC
T ss_conf             3599997288977688998853