HHsearch alignment of GI: 254780762 and MMDB domain: 1dd9_A_146-285
>1dd9_A (A:146-285) DNA primase, DNAG; toprim, 3-helix bundle, DNA-binding protein, RNA polymerase, replication protein; HET: DNA; 1.60A {Escherichia coli}
Probab=90.15 E-value=1.6 Score=24.44 Aligned_cols=106 Identities=16% Similarity=0.151 Sum_probs=66.1
Q ss_pred CCCCEEEEEECHHHHHHHHHHCCEEEEEEEHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHH
Q ss_conf 56736999835889999975174013421012100200026811128899999851578554999946997868999999
Q gi|254780762|r 80 RDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYI 159 (201)
Q Consensus 80 Rd~~~lCVVE~~~Di~~IE~t~~y~G~YhVLgG~ispl~g~~p~~l~i~~L~~ri~~~~i~EVIlA~~~t~EGe~Ta~yi 159 (201)
+..+.+.|||-..|.+++...|.- -.-...++..++ .. +..|. ...++|++|+...-.|+.-+.-+
T Consensus 16 ~~~~~v~i~EG~~Dals~~~~g~~-~~~~~~~~~~~~------~~--~~~l~-----~~~~~i~i~~D~D~~G~~~~~~~ 81 (140)
T 1dd9_A 16 AEPNRLLVVEGYMDVVALAQYGIN-YAVASLGTSTTA------DH--IQLLF-----RATNNVICCYDGDRAGRDAAWRA 81 (140)
T ss_dssp SSCSCEEEESSHHHHHHHHHTTCC-CEEECCC-CCCH------HH--HHHHH-----HHCSEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEECHHHHHHHHHCCCC-CCCHHHHCCCHH------HH--HHHHH-----HCCCCEEEEECCCCHHHHHHHHH
T ss_conf 556525999557989999871523-440133102117------89--99987-----40774578753662021678858
Q ss_pred HHHHCCCCC-----EEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 998201798-----0887414674882066634799999983064
Q gi|254780762|r 160 MDKLKGIDV-----KITRLAYGIPMGSELDYLDDGTIFEAIRSRT 199 (201)
Q Consensus 160 ~~~lk~~~i-----kitrla~GiP~G~~ley~D~~TL~~Al~~R~ 199 (201)
.+.++.... .+..+..|-=.+--+----...+.++|.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~kD~nd~~~~~g~e~~~~~i~~a~ 126 (140)
T 1dd9_A 82 LETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 126 (140)
T ss_dssp HHHHGGGCCTTCEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCC
T ss_conf 998768735997389998058998899988517799999986288