HHsearch results for GI: 254780762 and protein with PDBid: 1nnq_A
>1nnq_A Rubrerythrin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.35A {Pyrococcus furiosus} SCOP: a.25.1.1 g.41.5.1 PDB: 2hr5_A
Probab=93.15 E-value=0.08 Score=32.24 Aligned_cols=58 Identities=21% Similarity=0.379 Sum_probs=47.2
Q ss_pred CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-------CCCCCCCCCCCCC---CCCCCCCCCCC
Q ss_conf 9953799999999719989999999999999985-------1828899973345---65410035555
Q gi|254780762|r 23 FGPRSARRATLHLVKKKEQLLGPLAEAMANIYNK-------VCLCSICGNVDTT---DPCAICIDQQR 80 (201)
Q Consensus 23 IG~KsA~R~a~~Ll~~~~~~~~~l~~~l~~~~~~-------i~~C~~C~~l~~~---~~C~iC~d~~R 80 (201)
.|-+.+.++.-+++...+.-...|-.++.++... +-.|++||++.+. +.||+|..|.-
T Consensus 98 eG~~~~a~~f~~i~~~E~~H~~~~~~~l~~l~~~~~~~~~~~~vC~~CG~i~~g~~P~~CPvC~~p~~ 165 (171)
T 1nnq_A 98 QGEKEAVRTTHYALEAEKIHAELYRKAKEKAEKGEDIEIKKVYICPICGYTAVDEAPEYCPVCGAPKE 165 (171)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCEEECTTTCCEEESCCCSBCTTTCCBGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 68799999999999999999999999998755124567787358998939389999997979999676