HHsearch results for GI: 254780762 and protein with PDBid: 1vdd_A
>1vdd_A Recombination protein RECR; helix-hairpin-helix, zinc finger, toprim, walker B ATP binding motif; 2.50A {Deinococcus radiodurans} SCOP: e.49.1.1 PDB: 2v1c_A
Probab=100.00 E-value=0 Score=529.17 Aligned_cols=194 Identities=37% Similarity=0.685 Sum_probs=190.2
Q ss_pred CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 86679999999975689995379999999971998999999999999998518288999733456541003555567369
Q gi|254780762|r 6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVI 85 (201)
Q Consensus 6 ~~~~l~~LI~~l~kLPGIG~KsA~R~a~~Ll~~~~~~~~~l~~~l~~~~~~i~~C~~C~~l~~~~~C~iC~d~~Rd~~~l 85 (201)
+|++|++||++|++|||||||||+|||||||+++++.+++|+++|.+++++|++|+.||+++++++|+||+|++||+++|
T Consensus 3 ~p~~ie~LI~~l~kLPGIG~KsA~RlA~~LL~~~~~~~~~La~~i~~~k~~i~~C~~C~~lse~~~C~IC~D~~Rd~~~i 82 (228)
T 1vdd_A 3 YPPSLVSLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASALLEAKRDLHVCPICFNITDAEKCDVCADPSRDQRTI 82 (228)
T ss_dssp CCHHHHHHHHHHHTSTTCCHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHCEECSSSCCEESSSSCHHHHCSSSCTTEE
T ss_pred CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 95999999999966899988999999999981999999999999999998188386788716777766435777765458
Q ss_pred EEEECHHHHHHHHHHCCEEEEEEEHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 99835889999975174013421012100200026811128899999851578554999946997868999999998201
Q gi|254780762|r 86 IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG 165 (201)
Q Consensus 86 CVVE~~~Di~~IE~t~~y~G~YhVLgG~ispl~g~~p~~l~i~~L~~ri~~~~i~EVIlA~~~t~EGe~Ta~yi~~~lk~ 165 (201)
||||++.|+++||+||.|+|+||||||+|||++|++|++|++++|++|+++ ++|||||||||+|||+||+||++.|++
T Consensus 83 CVVE~~~Dl~aIE~tg~y~G~YhVLgG~iSpldgigp~~l~i~~L~~Ri~~--~~EVIlA~~~t~EGe~Ta~yi~~~Lk~ 160 (228)
T 1vdd_A 83 CVVEEPGDVIALERSGEYRGLYHVLHGVLSPMNGVGPDKLHIKPLLPRVGQ--GMEVILATGTTVEGDATALYLQRLLEP 160 (228)
T ss_dssp EEESSHHHHHHTTTTSSCCSEEEECSSCCBGGGTBCTTTSTTGGGGGGCCT--TCEEEECCCSSHHHHHHHHHHHHHHTT
T ss_pred EEECCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCC--CCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 997789999999860811269986687637234899410036999998635--867999817985518999999998544
Q ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 798088741467488206663479999998306479
Q gi|254780762|r 166 IDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL 201 (201)
Q Consensus 166 ~~ikitrla~GiP~G~~ley~D~~TL~~Al~~R~~l 201 (201)
+++||||||+|||+||+|||+|+.||++||++|++|
T Consensus 161 ~~ikiTRLA~GlP~G~~LeY~D~~TL~~Al~~R~~i 196 (228)
T 1vdd_A 161 LGAAISRIAYGVPVGGSLEYTDEVTLGRALTGRQTV 196 (228)
T ss_dssp SSCEEEECCBCBCTTCCGGGSCHHHHHHHHHTCEEE
T ss_pred CCCEEEEECCCCCCCCCHHHCCHHHHHHHHHCCCCC
T ss_conf 497087610068778420016899999999808325