HHsearch results for GI: 254780762 and protein with PDBid: 1vdd_A

>1vdd_A Recombination protein RECR; helix-hairpin-helix, zinc finger, toprim, walker B ATP binding motif; 2.50A {Deinococcus radiodurans} SCOP: e.49.1.1 PDB: 2v1c_A
Probab=100.00  E-value=0  Score=529.17  Aligned_cols=194  Identities=37%  Similarity=0.685  Sum_probs=190.2

Q ss_pred             CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             86679999999975689995379999999971998999999999999998518288999733456541003555567369
Q gi|254780762|r    6 TGKEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVDTTDPCAICIDQQRDASVI   85 (201)
Q Consensus         6 ~~~~l~~LI~~l~kLPGIG~KsA~R~a~~Ll~~~~~~~~~l~~~l~~~~~~i~~C~~C~~l~~~~~C~iC~d~~Rd~~~l   85 (201)
                      +|++|++||++|++|||||||||+|||||||+++++.+++|+++|.+++++|++|+.||+++++++|+||+|++||+++|
T Consensus         3 ~p~~ie~LI~~l~kLPGIG~KsA~RlA~~LL~~~~~~~~~La~~i~~~k~~i~~C~~C~~lse~~~C~IC~D~~Rd~~~i   82 (228)
T 1vdd_A            3 YPPSLVSLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASALLEAKRDLHVCPICFNITDAEKCDVCADPSRDQRTI   82 (228)
T ss_dssp             CCHHHHHHHHHHHTSTTCCHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHCEECSSSCCEESSSSCHHHHCSSSCTTEE
T ss_pred             CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             95999999999966899988999999999981999999999999999998188386788716777766435777765458


Q ss_pred             EEEECHHHHHHHHHHCCEEEEEEEHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             99835889999975174013421012100200026811128899999851578554999946997868999999998201
Q gi|254780762|r   86 IVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGIQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKG  165 (201)
Q Consensus        86 CVVE~~~Di~~IE~t~~y~G~YhVLgG~ispl~g~~p~~l~i~~L~~ri~~~~i~EVIlA~~~t~EGe~Ta~yi~~~lk~  165 (201)
                      ||||++.|+++||+||.|+|+||||||+|||++|++|++|++++|++|+++  ++|||||||||+|||+||+||++.|++
T Consensus        83 CVVE~~~Dl~aIE~tg~y~G~YhVLgG~iSpldgigp~~l~i~~L~~Ri~~--~~EVIlA~~~t~EGe~Ta~yi~~~Lk~  160 (228)
T 1vdd_A           83 CVVEEPGDVIALERSGEYRGLYHVLHGVLSPMNGVGPDKLHIKPLLPRVGQ--GMEVILATGTTVEGDATALYLQRLLEP  160 (228)
T ss_dssp             EEESSHHHHHHTTTTSSCCSEEEECSSCCBGGGTBCTTTSTTGGGGGGCCT--TCEEEECCCSSHHHHHHHHHHHHHHTT
T ss_pred             EEECCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCC--CCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             997789999999860811269986687637234899410036999998635--867999817985518999999998544


Q ss_pred             CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             798088741467488206663479999998306479
Q gi|254780762|r  166 IDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTVL  201 (201)
Q Consensus       166 ~~ikitrla~GiP~G~~ley~D~~TL~~Al~~R~~l  201 (201)
                      +++||||||+|||+||+|||+|+.||++||++|++|
T Consensus       161 ~~ikiTRLA~GlP~G~~LeY~D~~TL~~Al~~R~~i  196 (228)
T 1vdd_A          161 LGAAISRIAYGVPVGGSLEYTDEVTLGRALTGRQTV  196 (228)
T ss_dssp             SSCEEEECCBCBCTTCCGGGSCHHHHHHHHHTCEEE
T ss_pred             CCCEEEEECCCCCCCCCHHHCCHHHHHHHHHCCCCC
T ss_conf             497087610068778420016899999999808325