HHsearch results for GI: 254780762 and protein with PDBid: 2gai_A
>2gai_A DNA topoisomerase I; zinc ribbon; HET: DNA; 1.70A {Thermotoga maritima MSB8} PDB: 2gaj_A*
Probab=92.69 E-value=0.3 Score=28.38 Aligned_cols=62 Identities=19% Similarity=0.224 Sum_probs=44.1
Q ss_pred HHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 89999985157855499994699786899999999820179808874146748820666347999999830647
Q gi|254780762|r 127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRTV 200 (201)
Q Consensus 127 i~~L~~ri~~~~i~EVIlA~~~t~EGe~Ta~yi~~~lk~~~ikitrla~GiP~G~~ley~D~~TL~~Al~~R~~ 200 (201)
++.|.+.++. .|||+|+.|.-|||.-+..|.+.++. ..++.|+=+ .-++...+.+||.|.+.
T Consensus 67 ~~~lk~l~k~---~~iiiAtD~DREGE~I~~~i~~~~~~-~~~v~R~~~--------s~lt~~~I~~A~~n~~~ 128 (633)
T 2gai_A 67 VEKLKDLAKK---GELLIASDMDREGEAIAWHIARVTNT-LGRKNRIVF--------SEITPRVIREAVKNPRE 128 (633)
T ss_dssp HHHHHHHHHH---SCEEECCCSSHHHHHHHHHHHHHHTC-TTSSCBCCC--------SSCCHHHHHHHHHSCBC
T ss_pred HHHHHHHHCC---CCEEECCCCCCCHHHHHHHHHHHHCC-CCCCEEEEE--------CCCCHHHHHHHHHCCCC
T ss_conf 9999998559---97999589983465999999998589-898168998--------13899999999858732