HHSEARCH alignment of GI: 254780762 and SCOP domain: d1mpga1

Alignment

Probab=91.75  E-value=0.058  Score=31.55  Aligned_cols=32  Identities=28%  Similarity=0.451  Sum_probs=27.2

Q ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCH
Q ss_conf             79999999975689995379999999971998
Q gi|254780762|r    9 EIENLIKILARIPGFGPRSARRATLHLVKKKE   40 (201)
Q Consensus         9 ~l~~LI~~l~kLPGIG~KsA~R~a~~Ll~~~~   40 (201)
                      ..+++++.|.++|||||+||+=+.++-+....
T Consensus       102 ~~~e~~~~L~~l~GIGpwTAd~illf~lg~~d  133 (183)
T d1mpga1         102 DVEQAMKTLQTFPGIGRWTANYFALRGWQAKD  133 (183)
T ss_dssp             CHHHHHHHHTTSTTCCHHHHHHHHHHHSCCSS
T ss_pred             CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
T ss_conf             57999999998645349999999986078998

SCOP domain information

class: All alpha proteins
fold: DNA-glycosylase
superfamily: DNA-glycosylase
family: DNA repair glycosylase, 2 C-terminal domains
domain: 3-Methyladenine DNA glycosylase II (gene alkA or aidA)
species: Escherichia coli [TaxId: 562]