HHSEARCH alignment of GI: 254780762 and SCOP domain: d1mw9x_

Alignment

Probab=96.32  E-value=0.0066  Score=37.92  Aligned_cols=63  Identities=17%  Similarity=0.301  Sum_probs=44.5

Q ss_pred             HHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             8999998515785549999469978689999999982017980887414674882066634799999983064
Q gi|254780762|r  127 IQSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLDDGTIFEAIRSRT  199 (201)
Q Consensus       127 i~~L~~ri~~~~i~EVIlA~~~t~EGe~Ta~yi~~~lk~~~ikitrla~GiP~G~~ley~D~~TL~~Al~~R~  199 (201)
                      ++.|.+.+  .++++||+||.|.-|||.-+..|.+.++..+.++.|+=+        .-+....+.+||++..
T Consensus        92 ~~~ik~l~--k~~d~iiiAtD~DrEGE~I~~~i~~~~~~~~~~~~R~~~--------~~lt~~~i~~A~~n~~  154 (591)
T d1mw9x_          92 VSELKQLA--EKADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVF--------NEITKNAIRQAFNKPG  154 (591)
T ss_dssp             HHHHHHHH--HTCSEEEECCCSSHHHHHHHHHHHHHHCSCGGGEEECCC--------SSCSHHHHHHHHHSCB
T ss_pred             HHHHHHHH--HCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEE--------CCCCHHHHHHHHHCCC
T ss_conf             99999998--349989988889736509999999996358986589994--------5678899999874766

SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: Prokaryotic type I DNA topoisomerase
superfamily: Prokaryotic type I DNA topoisomerase
family: Prokaryotic type I DNA topoisomerase
domain: DNA topoisomerase I, 67K N-terminal domain
species: Escherichia coli [TaxId: 562]