HHSEARCH alignment of GI: 254780762 and SCOP domain: d1pu6a_

Alignment

Probab=92.15  E-value=0.032  Score=33.34  Aligned_cols=30  Identities=23%  Similarity=0.112  Sum_probs=20.5

Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
Q ss_conf             999999997568999537999999997199
Q gi|254780762|r   10 IENLIKILARIPGFGPRSARRATLHLVKKK   39 (201)
Q Consensus        10 l~~LI~~l~kLPGIG~KsA~R~a~~Ll~~~   39 (201)
                      .++..+.|.+|||||+|||.=+..+-+..+
T Consensus       115 ~~~~~~~L~~lpGIG~kTA~~vl~~~~~~~  144 (217)
T d1pu6a_         115 QEVTREWLLDQKGIGKESADAILCYACAKE  144 (217)
T ss_dssp             HHCCHHHHHTSTTCCHHHHHHHHHHTTCCS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf             678999999876365699999999972880

SCOP domain information

class: All alpha proteins
fold: DNA-glycosylase
superfamily: DNA-glycosylase
family: 3-Methyladenine DNA glycosylase III (MagIII)
domain: 3-Methyladenine DNA glycosylase III (MagIII)
species: Helicobacter pylori [TaxId: 210]