HHSEARCH alignment of GI: 254780762 and SCOP domain: d2abka_

Alignment

Probab=91.64  E-value=0.081  Score=30.59  Aligned_cols=26  Identities=19%  Similarity=0.216  Sum_probs=20.9

Q ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHCC
Q ss_conf             99997568999537999999997199
Q gi|254780762|r   14 IKILARIPGFGPRSARRATLHLVKKK   39 (201)
Q Consensus        14 I~~l~kLPGIG~KsA~R~a~~Ll~~~   39 (201)
                      .+.|.+|||||++||.-+..+-...+
T Consensus       108 ~~~L~~LpGVG~~TA~~Il~~a~~~p  133 (211)
T d2abka_         108 RAALEALPGVGRKTANVVLNTAFGWP  133 (211)
T ss_dssp             HHHHHHSTTCCHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHCHHHHHHHHHHHHCCC
T ss_conf             99999998605178999999985680

SCOP domain information

class: All alpha proteins
fold: DNA-glycosylase
superfamily: DNA-glycosylase
family: Endonuclease III
domain: Endonuclease III
species: Escherichia coli [TaxId: 562]