RPSBLAST alignment of GI: 254780762 and protein with PDBid: 1vdd
>1vdd_A Recombination protein RECR; helix-hairpin-helix, zinc finger, toprim, walker B ATP binding motif; 2.50A {Deinococcus radiodurans} SCOP: e.49.1.1 PDB: 2v1c_A Length = 228
Score = 220 bits (561), Expect = 2e-58
Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 2/194 (1%)
Query: 8 KEIENLIKILARIPGFGPRSARRATLHLVKKKEQLLGPLAEAMANIYNKVCLCSICGNVD 67
+ +LI+ L+R+PG GP+SA+R HL ++ + + LA A+ + +C IC N+
Sbjct: 5 PSLVSLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASALLEAKRDLHVCPICFNIT 64
Query: 68 TTDPCAICIDQQRDASVIIVVEDVADLWALERSKAVNALYHVLGGSLSPLDRIGPEDIGI 127
+ C +C D RD I VVE+ D+ ALERS LYHVL G LSP++ +GP+ + I
Sbjct: 65 DAEKCDVCADPSRDQRTICVVEEPGDVIALERSGEYRGLYHVLHGVLSPMNGVGPDKLHI 124
Query: 128 QSLIERIEVKKIRELIFAISATIEGQTTAHYIMDKLKGIDVKITRLAYGIPMGSELDYLD 187
V + E+I A T+EG TA Y+ L+ + I+R+AYG+P+G L+Y D
Sbjct: 125 --KPLLPRVGQGMEVILATGTTVEGDATALYLQRLLEPLGAAISRIAYGVPVGGSLEYTD 182
Query: 188 DGTIFEAIRSRTVL 201
+ T+ A+ R +
Sbjct: 183 EVTLGRALTGRQTV 196