HHsearch alignment of GI: 254780763 and MMDB domain: 1j8b_A_
>1j8b_A (A:) YBAB; hypothetical protein, structural genomics, structure 2 function project, S2F, unknown function; HET: MSE; 1.75A {Haemophilus influenzae rd KW20}
Probab=90.70 E-value=0.057 Score=34.08 Aligned_cols=92 Identities=10% Similarity=0.111 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECCCCEEEEEECHHH--CC-CCHHHHH---HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998530899997698499999648307468864788--29-1006899---9999999999999999
Q gi|254780763|r 10 QFKEIQGKMEKMKESITSLEAEGNAGGGMVSVRINGKNMLTGVKIDRSL--LF-EDNVEIL---EDLIIAAHSDAHKKIE 83 (107)
Q Consensus 10 qaq~mq~~m~~~q~eL~~~~v~g~sg~g~V~V~~~G~~~i~~i~Id~~~--l~-~~d~e~L---edli~~A~N~A~~k~~ 83 (107)
..++|.++++++|+++....-+-. .++|+.+...-.++|+++... .+ .-|.+.+ -+.+-.++-.|+..+.
T Consensus 9 n~~~m~~~aq~~q~~~~~~q~el~----~~~~~~~s~dG~V~Vtv~g~g~v~~i~I~~~~~~~d~e~L~~~i~~A~n~A~ 84 (112)
T 1j8b_A 9 GLGGLXKQAQQXQEKXQKXQEEIA----QLEVTGESGAGLVKITINGAHNCRRIDIDPSLXEDDKEXLEDLIAAAFNDAV 84 (112)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHT----TSEEEEEEGGGTEEEEEETTCCEEEEEECGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH----CEEEEEEECCCEEEEEEECCCEEEEEEECHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999985----6099999779769999977827999998677714789999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 999999999744899899999998
Q gi|254780763|r 84 DLVATKTQEITEGLPIPPGLKFPF 107 (107)
Q Consensus 84 ~~~~~~m~~~tggl~lp~g~~lPf 107 (107)
+.+++.+...... +.+|++||+
T Consensus 85 ~~a~~~~~~~~~~--l~g~~~lPg 106 (112)
T 1j8b_A 85 RRAEELQKEKXAS--VTAGXPLPP 106 (112)
T ss_dssp HHHHHHHHHHHHH--HTCC-----
T ss_pred HHHHHHHHHHHHH--HHCCCCCCC
T ss_conf 9999999999999--857999998